RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC1A6 (Homo sapiens)

Ensembl gene IDs: ENSG00000105143

Ensembl transcript IDs: ENST00000221742.7, ENST00000430939.6, ENST00000544886.6, ENST00000594383.2, ENST00000595863.1, ENST00000596697.1, ENST00000597262.1, ENST00000598504.5, ENST00000599636.1, ENST00000600144.5, ENST00000601761.1

Found 306 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATGATCCGGGCCGGCCCTaGGCTCACGTGGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHDPGRP*AHVGVG
Trigger: CCCCACACCCACGTGAGCGCAGGGCCGGCCCGGATC...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS-3UTR GCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATCGGGACGCGCTATGCTaGGGGAGGGATCCGGGCCGG +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHRDALC*GRDPGR
Trigger: CCGGCCCGGATCCCTCCCGCAGCATAGCGCGTCCCG...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS-3UTR GCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATACCCGCCAGGGACTGTaGAGCACCGGCGCGGGGACC +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHTRQGL*STGAGT
Trigger: GGTCCCCGCGCCGGTGCTGCACAGTCCCTGGCGGGT...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR CCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATACCCGGCCCAGCCGCTaGCCGCTCTCCCGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHTRPSR*PLSRRN
Trigger: GTTCCTGCGGGAGAGCGGCCAGCGGCTGGGCCGGGT...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR CCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATGGCCCTGCGCTCACGTaGGTGTGGGGGCACCGAGCG +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHGPALT*VWGHRA
Trigger: CGCTCGGTGCCCCCACACCCACGTGAGCGCAGGGCC...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS-3UTR GCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATATCCGGCCCTCCCGGTaGAGCCCCTCCTTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHIRPSR*SPSLEP
Trigger: GGGCTCCAAGGAGGGGCTGCACCGGGAGGGCCGGAT...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR GCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATAGCCGGGACGCGCTATaGTGCGGGAGGGATCCGGGC +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHSRDAL*CGRDPG
Trigger: GCCCGGATCCCTCCCGCAGCATAGCGCGTCCCGGCT...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS-3UTR CCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATAGGCCCCAGCATCCCTaGCGGAGCGCGGGGAACAGG +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHRPQHP*RSAGNR
Trigger: CCTGTTCCCCGCGCTCCGCCAGGGATGCTGGGGCCT...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS-3UTR CCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATGTGGGCGGGGGTGAGTaGCCTCTCCGGCATCCAGCC +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHVGGGE*PLRHPA
Trigger: GGCTGGATGCCGGAGAGGCCACTCACCCCCGCCCAC...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS-3UTR GCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATGCAGGCGCAGGCGCGTaGGCAGTGCTCTCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHAGAGA*AVLSAA
Trigger: TGCAGCAGAGAGCACTGCGCACGCGCCTGCGCCTGC...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR GCA 90 bp TCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCCCTCCCCAGCTCGAGGGTCATGGTCTaGAGGCGCAGGCGCGTGCGC +
Preference number: 4 (lower is better)
Translates to: SAHGQLGNRCVTRTPLPSSRVMV*RRRRVR
Trigger: GCGCACGCGCCTGCGCCTGCAGACCATGACCCTCGA...GCTGGGGAGGGGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR GCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATTCGAGGGTCATGGTCTaGAGGCGCAGGCGCGTGCGC +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHSRVMV*RRRRVR
Trigger: GCGCACGCGCCTGCGCCTGCAGACCATGACCCTCGA...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR GCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATGGGAGAGGGCTCCGCTaGCCCCTTCTCCTTGCGGGT +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHGRGLR*PLLLAG
Trigger: ACCCGCAAGGAGAAGGGGGCAGCGGAGCCCTCTCCC...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS-3UTR GCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATGGGGGACAGCGTGCTTaGGAAGGGAGGGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHGGQRA*EGRGTG
Trigger: CCCAGTCCCCCTCCCTTCGCAAGCACGCTGTCCCCC...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS-3UTR CCA 90 bp TCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCCCTCCCCAGCCGTGCTCGAGGGTCATaGTCTGCAGGCGCAGGCGCG +
Preference number: 4 (lower is better)
Translates to: SAHGQLGNRCVTRTPLPSRARGS*SAGAGA
Trigger: CGCGCCTGCGCCTGCAGACCATGACCCTCGAGCACG...GCTGGGGAGGGGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR CCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATCGTGCTCGAGGGTCATaGTCTGCAGGCGCAGGCGCG +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHRARGS*SAGAGA
Trigger: CGCGCCTGCGCCTGCAGACCATGACCCTCGAGCACG...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR CCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATGGCTCCGCAGCCGTGTaGGAGAAGGGGGACAGCGTG +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHGSAAV*EKGDSV
Trigger: CACGCTGTCCCCCTTCTCCCACACGGCTGCGGAGCC...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS-3UTR TCA 90 bp TCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCCCTCCCCAGCGCAGGACGAACCTGGTaGTGCGGCGGTCCACACCCA +
Preference number: 4 (lower is better)
Translates to: SAHGQLGNRCVTRTPLPSAGRTW*CGGPHP
Trigger: TGGGTGTGGACCGCCGCATCACCAGGTTCGTCCTGC...GCTGGGGAGGGGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR GCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATTGCTGCAGGCTTTCCTaGAGCCGCTGCAGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHCCRLS*SRCSQP
Trigger: GGGCTGGCTGCAGCGGCTGCAGGAAAGCCTGCAGCA...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR CCA 90 bp GCAGAACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACACCCGGCCCAGCCGCTaGCCGCTCTCCCGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: AERVFSPRSVGQQMCHQDTRPSR*PLSRRN
Trigger: GTTCCTGCGGGAGAGCGGCCAGCGGCTGGGCCGGGT...GTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR CCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATGGTGCAGCCCCTCCTTaGAGCCCTTCCCGGGATGGA +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHGAAPP*SPSRDG
Trigger: TCCATCCCGGGAAGGGCTCCAAGGAGGGGCTGCACC...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR CCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATCCGGCCTTGGCCACTTaGCTGCTGTGTGCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHPALAT*LLCALG
Trigger: CCCAAGGGCACACAGCAGCCAAGTGGCCAAGGCCGG...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS-3UTR TCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATGGCTGGAGAACCGCTTaGGCCCAGGAGTTCATGGCC +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHGWRTA*AQEFMA
Trigger: GGCCATGAACTCCTGGGCTCAAGCGGTTCTCCAGCC...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS-3UTR GCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATCAGGCGCGTGCGCAGTaGTCTCTGCTGCAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHQARAQ*SLLQAF
Trigger: GAAAGCCTGCAGCAGAGAGCACTGCGCACGCGCCTG...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR GCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATAGAAGGGGGACAGCGTaGTTGCGAAGGGAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHRRGTA*LRREGD
Trigger: GTCCCCCTCCCTTCGCAAGCACGCTGTCCCCCTTCT...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS-3UTR CCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATTCCCCATCCGCCCCGTaGCCTTGTTGTCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHSPSAP*PCCPGM
Trigger: CATCCCTGGACAACAAGGCCACGGGGCGGATGGGGA...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR CCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATCATCAGCTGTGGGGATaGTCTCGATCCGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHHQLWG*SRSGPP
Trigger: GGGAGGGCCGGATCGAGACCATCCCCACAGCTGATG...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR CCA 90 bp CAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCCCTCCCCAGCCAGAATGGAGGAGGCATaGAGGCACCCGGCTCAGACC +
Preference number: 4 (lower is better)
Translates to: QPTVSWATDVSPGLPSPARMEEA*RHPAQT
Trigger: GGTCTGAGCCGGGTGCCTCCATGCCTCCTCCATTCT...GGCTGGGGAGGGGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR CCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATGGCTCCACCATCCCGTaGGCACAGACCAGGACTCAC +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHGSTIP*AQTRTH
Trigger: GTGAGTCCTGGTCTGTGCCCACGGGATGGTGGAGCC...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR TCA 90 bp GAACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCCCAGGCAGCGGAAGGTaGTGGGCAGCGTTGCCGAGC +
Preference number: 4 (lower is better)
Translates to: ERVFSPRSVGQQMCHQDSPGSGR*WAALPS
Trigger: GCTCGGCAACGCTGCCCATCACCTTCCGCTGCCTGG...GGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR TCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATCTACAGGGTGAGGGGTaGGGGTGGGTCTTTCCCACT +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHLQGEG*GWVFPT
Trigger: AGTGGGAAAGACCCACCCTCACCCCTCACCCTGTAG...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS-3UTR GCA 90 bp TGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCCCTCCCCCGCAGTGCTCTCTGCTaGAGGCTTTCCTGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: CSAHGQLGNRCVTRTPLPRSALC*RLSCSR
Trigger: GCGGCTGCAGGAAAGCCTGCAGCAGAGAGCACTGCG...GGGGAGGGGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR GCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATGTGCGCAGTGCTCTCTaGTGCAGGCTTTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHVRSAL*CRLSCS
Trigger: GCTGCAGGAAAGCCTGCAGCAGAGAGCACTGCGCAC...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR GCA 90 bp GCAGAACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACGCAGGCGCAGGCGCGTaGGCAGTGCTCTCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: AERVFSPRSVGQQMCHQDAGAGA*AVLSAA
Trigger: TGCAGCAGAGAGCACTGCGCACGCGCCTGCGCCTGC...GTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR GCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATAGGAAGCGCAGCACGTaGTCGAGGGTCATGGTCTGC +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHRKRST*SRVMVC
Trigger: GCAGACCATGACCCTCGAGCACGTGCTGCGCTTCCT...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR GCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATCATGTAGTACACAGCTaGCCGCATCCCCATCCGCCC +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHHVVHS*PHPHPP
Trigger: GGGCGGATGGGGATGCGGGCAGCTGTGTACTACATG...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR GCA 90 bp CAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCCCTCCCCAGCCAGCCCCAACACTGGCTaGTGTGGCCGTGATGCTGAT +
Preference number: 4 (lower is better)
Translates to: QPTVSWATDVSPGLPSPASPNTG*CGRDAD
Trigger: ATCAGCATCACGGCCACAGCAGCCAGTGTTGGGGCT...GGCTGGGGAGGGGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR GCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATCCTTGGCCACTTGGCTaGTGTGTGCCCTTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHPWPLG*CVPLGQ
Trigger: TTGGCCCAAGGGCACACAGCAGCCAAGTGGCCAAGG...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS-3UTR CCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATAGAATGGAGGAGGCATaGAGGCACCCGGCTCAGACC +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHRMEEA*RHPAQT
Trigger: GGTCTGAGCCGGGTGCCTCCATGCCTCCTCCATTCT...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR CCA 90 bp CAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCCCTCCCCAGCCAGGACAATGCCGGCATaGAGGAACAGGCCCACGATG +
Preference number: 4 (lower is better)
Translates to: QPTVSWATDVSPGLPSPARTMPA*RNRPTM
Trigger: CATCGTGGGCCTGTTCCTCCATGCCGGCATTGTCCT...GGCTGGGGAGGGGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR CCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATGCTGCTGTGTGCCCTTaGGCCAACTCCTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHAAVCP*ANSSPS
Trigger: AGAGGGAGAGGAGTTGGCCCAAGGGCACACAGCAGC...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS-3UTR CCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATTGCACCTTCCGGCCTTaGCCACTTGGCTGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHCTFRP*PLGCCV
Trigger: CACACAGCAGCCAAGTGGCCAAGGCCGGAAGGTGCA...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS-3UTR CCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATTGCCATGGCTGCTCATaGTCTATCGGCGTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHCHGCS*SIGVRS
Trigger: GCTCCGGACGCCGATAGACCATGAGCAGCCATGGCA...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS-3UTR TCA 90 bp CAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCCCTCCCCAGCCGGTTCCGTTCTCCACTaGGAATGGAGGAGGCATGGA +
Preference number: 4 (lower is better)
Translates to: QPTVSWATDVSPGLPSPAGSVLH*EWRRHG
Trigger: TCCATGCCTCCTCCATTCTCAGTGGAGAACGGAACC...GGCTGGGGAGGGGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR TCA 90 bp TGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCCCTCCCCGGAACAGGCCCACGATaGCGGTCAGGGTGTACATGC +
Preference number: 4 (lower is better)
Translates to: CSAHGQLGNRCVTRTPLPGTGPR*RSGCTC
Trigger: GCATGTACACCCTGACCGTCATCGTGGGCCTGTTCC...GGGGAGGGGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR GCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATAAGCTCAGCATCTCCTaGAGGGTACCCAAGGCCCGA +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHKLSIS*RVPKAR
Trigger: TCGGGCCTTGGGTACCCTGCAGGAGATGCTGAGCTT...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR GCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATCACTTGGCTGCTGTGTaGCCTTGGGCCAACTCCTCT +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHHLAAV*PWANSS
Trigger: AGAGGAGTTGGCCCAAGGGCACACAGCAGCCAAGTG...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS-3UTR GCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATGGCTGTTGCCATGGCTaGTCATGGTCTATCGGCGTC +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHGCCHG*SWSIGV
Trigger: GACGCCGATAGACCATGAGCAGCCATGGCAACAGCC...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS-3UTR CCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATGAGCCCTTCCCGGGATaGATGATGGTGACCATGAGG +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHEPFPG*MMVTMR
Trigger: CCTCATGGTCACCATCATCCATCCCGGGAAGGGCTC...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR TCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATGGTTCCGTTCTCCACTaGGAATGGAGGAGGCATGGA +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHGSVLH*EWRRHG
Trigger: TCCATGCCTCCTCCATTCTCAGTGGAGAACGGAACC...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR TCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATTACCCAAGGCCCGAGTaGCATTTTCCAGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHYPRPE*HFPGSW
Trigger: CCAGCTTCCTGGAAAATGTCACTCGGGCCTTGGGTA...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR TCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATGTTTCATGCCACCAATaGCCAGCCCAAAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHVSCHQ*PAQRPQ
Trigger: CTGTGGCCTTTGGGCTGGTCATTGGTGGCATGAAAC...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR TCA 90 bp CGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCCCTGACGGCCGCTCCAATTaGGTCCCCCAGTACGTTGGT +
Preference number: 4 (lower is better)
Translates to: RVFSPRSVGQQMCHQDSPDGRSN*VPQYVG
Trigger: ACCAACGTACTGGGGGACTCAATTGGAGCGGCCGTC...AGGGGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR TCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATCAACACTTTGGGAGGTaGAGGCTGGAGAACCGCTTG +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHQHFGR*RLENRL
Trigger: CAAGCGGTTCTCCAGCCTTCACCTCCCAAAGTGTTG...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS-3UTR GCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATGCAGGAACAGGCTGTTaGCATGGCTGCTCATGGTCT +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHAGTGC*HGCSWS
Trigger: AGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGC...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR GCA 90 bp GTCAAGCAGAACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCTGCTGCAGGCTTTCCTaGAGCCGCTGCAGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: VKQNVCSAHGQLGNRCVTCCRLS*SRCSQP
Trigger: GGGCTGGCTGCAGCGGCTGCAGGAAAGCCTGCAGCA...GGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTTCTGCTTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR GCA 90 bp GAACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCCAGGCGCGTGCGCAGTaGTCTCTGCTGCAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: ERVFSPRSVGQQMCHQDSQARAQ*SLLQAF
Trigger: GAAAGCCTGCAGCAGAGAGCACTGCGCACGCGCCTG...GGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR CCA 90 bp TGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCCCTCCCCGTAGGTGAGCTGATATaGGCGCAGGGCAAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: CSAHGQLGNRCVTRTPLPVGELI*AQGKGQ
Trigger: CTGGCCTTTGCCCTGCGCCCATATCAGCTCACCTAC...GGGGAGGGGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR CCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATTCCTCACCATGGTCCTaGTTACCACCCTCGTGCTGT +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHSSPWS*LPPSCC
Trigger: ACAGCACGAGGGTGGTAACCAGGACCATGGTGAGGA...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR CCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATTCTCTGTCCTCACCATaGTCCTGGTTACCACCCTCG +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHSLSSP*SWLPPS
Trigger: CGAGGGTGGTAACCAGGACCATGGTGAGGACAGAGA...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR CCA 90 bp CAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCCCTCCCCAGCCTGTGACCTGGACAGCTaGAAGCGCTTAGGACATCCT +
Preference number: 4 (lower is better)
Translates to: QPTVSWATDVSPGLPSPACDLDS*KRLGHP
Trigger: AGGATGTCCTAAGCGCTTCCAGCTGTCCAGGTCACA...GGCTGGGGAGGGGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR CCA 90 bp CAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCCCTCCCCAGCCTGCCATGGCTGCTCATaGTCTATCGACATGCGACAG +
Preference number: 4 (lower is better)
Translates to: QPTVSWATDVSPGLPSPACHGCS*SIDMRQ
Trigger: CTGTCGCATGTCGATAGACCATGAGCAGCCATGGCA...GGCTGGGGAGGGGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR TCA 90 bp ATGAGTCAAGCAGAACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCGAGGCCCAGGGCGTTaGTGCCATTGGCGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: MSQAERVFSPRSVGQQMCRGPGR*CHWRSQ
Trigger: CTGGCTCCGCCAATGGCATCAACGCCCTGGGCCTCG...ACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTTCTGCTTGACTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR TCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATTGTCGAAGAAGTCCCTaGGGACTCTGCCCTTGTGTT +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHCRRSP*GLCPCV
Trigger: AACACAAGGGCAGAGTCCTCAGGGACTTCTTCGACA...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR TCA 90 bp AACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCCAGCTCCAGCTCCCGCTaGGACAAGTGCTCGATGACG +
Preference number: 4 (lower is better)
Translates to: NVCSAHGQLGNRCVTRTPSSSSR*DKCSMT
Trigger: CGTCATCGAGCACTTGTCTCAGCGGGAGCTGGAGCT...GGGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR GCA 90 bp GCAGAACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACAGGAAGCGCAGCACGTaGTCGAGGGTCATGGTCTGC +
Preference number: 4 (lower is better)
Translates to: AERVFSPRSVGQQMCHQDRKRST*SRVMVC
Trigger: GCAGACCATGACCCTCGAGCACGTGCTGCGCTTCCT...GTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR GCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATCTTGTTGTCCAGGGATaGCATACCTGTGACCAGGCT +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHLVVQG*HTCDQA
Trigger: AGCCTGGTCACAGGTATGGCATCCCTGGACAACAAG...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR GCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATCCCCACTTAGGATCCTaGTCCAAATGGACCCATCTC +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHPHLGS*SKWTHL
Trigger: GAGATGGGTCCATTTGGAGCAGGATCCTAAGTGGGG...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS-3UTR GCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATTCAACCAGGTCGAGCTaGAGGTTTCTTGGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHSTRSS*RFLGGL
Trigger: GAGACCTCCAAGAAACCTGCAGCTCGACCTGGTTGA...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS-3UTR CCA 90 bp TGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCCCTCCCCTCCTCACCATGGTCCTaGTTACCACCCTCGTGCTGT +
Preference number: 4 (lower is better)
Translates to: CSAHGQLGNRCVTRTPLPSSPWS*LPPSCC
Trigger: ACAGCACGAGGGTGGTAACCAGGACCATGGTGAGGA...GGGGAGGGGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR CCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATAACAGGCTGTTGCCATaGCTGCTCATGGTCTATCGG +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHNRLLP*LLMVYR
Trigger: CCGATAGACCATGAGCAGCCATGGCAACAGCCTGTT...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS-3UTR CCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATTGGGTCTTTCCCACTTaGTTCTCCCGACCTCTAGAC +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHWVFPT*FSRPLD
Trigger: GTCTAGAGGTCGGGAGAACCAAGTGGGAAAGACCCA...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS-3UTR CCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATTGCCACTGGCTTTTCTaGGATCTTCCTTGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHCHWLF*DLPCPP
Trigger: AGGAGGGCAAGGAAGATCCCAGAAAAGCCAGTGGCA...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS-3UTR CCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATCAGTACGTAGGTCCCTaGCCTTTGTGTTTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHQYVGP*PLCFAA
Trigger: GGCAGCAAAACACAAAGGCCAGGGACCTACGTACTG...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS-3UTR TCA 90 bp ACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCCCTACCCAAGGCCCGAGTaGCATTTTCCAGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: TCVQPTVSWATDVSPGLPYPRPE*HFPGSW
Trigger: CCAGCTTCCTGGAAAATGTCACTCGGGCCTTGGGTA...GGGGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR TCA 90 bp AACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCCACATGCGACAGAGTGTaGCCTGGACAGCTGGAAGCG +
Preference number: 4 (lower is better)
Translates to: NVCSAHGQLGNRCVTRTPTCDRV*PGQLEA
Trigger: CGCTTCCAGCTGTCCAGGTCACACTCTGTCGCATGT...GGGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR TCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATATGGGAAATCTGCCCTaGTTTTCCAGATCCTGCGTC +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHMGNLP*FSRSCV
Trigger: GACGCAGGATCTGGAAAATCAGGGCAGATTTCCCAT...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS-3UTR GCA 90 bp TCAAGCAGAACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGTGATGGGCAGCGTTaGCGAGCTGGAAGACGTGCC +
Preference number: 4 (lower is better)
Translates to: SSRTCVQPTVSWATDVSPGDGQR*RAGRRA
Trigger: GGCACGTCTTCCAGCTCGGCAACGCTGCCCATCACC...TGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTTCTGCTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR GCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATATGAGATGTGTGGGCTaGTTCTCGGAGCCTCTTACA +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHMRCVG*FSEPLT
Trigger: TGTAAGAGGCTCCGAGAAGCAGCCCACACATCTCAT...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS-3UTR GCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATCTGGCCTTTGTGTTTTaGTGCCACTGGCTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHLAFVF*CHWLFW
Trigger: CCAGAAAAGCCAGTGGCAGCAAAACACAAAGGCCAG...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS-3UTR CCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATAACAGGCTGTTGCCATaGCTGCTCATGGTCTATCTG +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHNRLLP*LLMVYL
Trigger: CAGATAGACCATGAGCAGCCATGGCAACAGCCTGTT...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS-3UTR CCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATGCAATCCCAACACTTTaGGAGGTGAAGGCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHAIPTL*EVKAGE
Trigger: TTCTCCAGCCTTCACCTCCCAAAGTGTTGGGATTGC...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS-3UTR TCA 90 bp GCAGAACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACGTTTCATGCCACCAATaGCCAGCCCAAAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: AERVFSPRSVGQQMCHQDVSCHQ*PAQRPQ
Trigger: CTGTGGCCTTTGGGCTGGTCATTGGTGGCATGAAAC...GTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR TCA 90 bp CGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCCCTTGTCGAAGAAGTCCCTaGGGACTCTGCCCTTGTGTT +
Preference number: 4 (lower is better)
Translates to: RVFSPRSVGQQMCHQDSPCRRSP*GLCPCV
Trigger: AACACAAGGGCAGAGTCCTCAGGGACTTCTTCGACA...AGGGGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR TCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATTCAAGCTACAATGCCTaGGTTGAGTTGTTGGGACAG +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHSSYNA*VELLGQ
Trigger: CTGTCCCAACAACTCAACTCAGGCATTGTAGCTTGA...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS-3UTR GCA 90 bp TCAAGCAGAACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGTGCGCAGTGCTCTCTaGTGCAGGCTTTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SSRTCVQPTVSWATDVSPVRSAL*CRLSCS
Trigger: GCTGCAGGAAAGCCTGCAGCAGAGAGCACTGCGCAC...TGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTTCTGCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR GCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATACCCTCGTGCTGTACTaGGTCTTGAACTGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHTLVLY*VLNCLK
Trigger: CTTCAAACAGTTCAAGACGCAGTACAGCACGAGGGT...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR GCA 90 bp GTCAAGCAGAACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAAGCTCAGCATCTCCTaGAGGGTACCCAAGGCCCGA +
Preference number: 4 (lower is better)
Translates to: VKQNVCSAHGQLGNRCVTKLSIS*RVPKAR
Trigger: TCGGGCCTTGGGTACCCTGCAGGAGATGCTGAGCTT...GGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTTCTGCTTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR GCA 90 bp CGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCCCTGGCTGTTGCCATGGCTaGTCATGGTCTATCGACATG +
Preference number: 4 (lower is better)
Translates to: RVFSPRSVGQQMCHQDSPGCCHG*SWSIDM
Trigger: CATGTCGATAGACCATGAGCAGCCATGGCAACAGCC...AGGGGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR CCA 90 bp GAACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCTCTCTGTCCTCACCATaGTCCTGGTTACCACCCTCG +
Preference number: 4 (lower is better)
Translates to: ERVFSPRSVGQQMCHQDSSLSSP*SWLPPS
Trigger: CGAGGGTGGTAACCAGGACCATGGTGAGGACAGAGA...GGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR CCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATCATTTTCCAGGAAGCTaGTTCCGTTCTCCACTGAGA +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHHFPGS*FRSPLR
Trigger: TCTCAGTGGAGAACGGAACCAGCTTCCTGGAAAATG...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR CCA 90 bp GAACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCAGTCCCCCAGTACGTTaGTCATTGTGCGAAGCCGGT +
Preference number: 4 (lower is better)
Translates to: ERVFSPRSVGQQMCHQDSSPPVR*SLCEAG
Trigger: ACCGGCTTCGCACAATGACCAACGTACTGGGGGACT...GGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR CCA 90 bp TGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCCCTCCCCAACAGGCTGTTGCCATaGCTGCTCATGGTCTATCGA +
Preference number: 4 (lower is better)
Translates to: CSAHGQLGNRCVTRTPLPNRLLP*LLMVYR
Trigger: TCGATAGACCATGAGCAGCCATGGCAACAGCCTGTT...GGGGAGGGGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR CCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATAAATTTGCTGACCCCTaGAGAAGAGCAGACAGCACT +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHKFADP*RRADST
Trigger: AGTGCTGTCTGCTCTTCTCCAGGGGTCAGCAAATTT...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS-3UTR CCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATGTGTTTTGCTGCCACTaGCTTTTCTGGGATCTTCCT +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHVFCCH*LFWDLP
Trigger: AGGAAGATCCCAGAAAAGCCAGTGGCAGCAAAACAC...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS-3UTR CCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATGAGCTGCAGGTTTCTTaGAGGTCTCAGTTTTACCAG +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHELQVS*RSQFYQ
Trigger: CTGGTAAAACTGAGACCTCCAAGAAACCTGCAGCTC...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS-3UTR TCA 90 bp AGCAGAACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGAGAGACAAGTGCTCGATaGCGGCCGCTCCAATTGAGT +
Preference number: 4 (lower is better)
Translates to: SRTCVQPTVSWATDVSPGETSAR*RPLQLS
Trigger: ACTCAATTGGAGCGGCCGTCATCGAGCACTTGTCTC...TCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTTCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR TCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATTCTTGGGCCATTTGCTaGAAAAATTTGCTGACCCCT +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHSWAIC*KNLLTP
Trigger: AGGGGTCAGCAAATTTTTTCAGCAAATGGCCCAAGA...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS-3UTR TCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATCATTCAGCTAAGATCTaGACAGTCAGGAAAACTCCC +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHHSAKI*TVRKTP
Trigger: GGGAGTTTTCCTGACTGTTCAGATCTTAGCTGAATG...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS-3UTR TCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATAAAAATCCCAAAGAGTaGACCACAGACTACACAGGG +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHKNPKE*TTDYTG
Trigger: CCCTGTGTAGTCTGTGGTTCACTCTTTGGGATTTTT...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS-3UTR GCA 90 bp CAGAACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTGCAGGAACAGGCTGTTaGCATGGCTGCTCATGGTCT +
Preference number: 4 (lower is better)
Translates to: QNVCSAHGQLGNRCVTRTAGTGC*HGCSWS
Trigger: AGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGC...AGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR GCA 90 bp GTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCCCTCCCACCCTCGTGCTGTACTaGGTCTTGAACTGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: VFSPRSVGQQMCHQDSPPTLVLY*VLNCLK
Trigger: CTTCAAACAGTTCAAGACGCAGTACAGCACGAGGGT...GGGAGGGGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR GCA 90 bp GAACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCGTACGTTGGTCATTGTaGGAAGCCGGTCAAGGAACC +
Preference number: 4 (lower is better)
Translates to: ERVFSPRSVGQQMCHQDSVRWSL*EAGQGT
Trigger: GGTTCCTTGACCGGCTTCGCACAATGACCAACGTAC...GGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR GCA 90 bp AGTCAAGCAGAACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACTGCCCCCTTCTCCTGTaGCATGAGGGACTTGTAGGG +
Preference number: 4 (lower is better)
Translates to: SQAERVFSPRSVGQQMCHCPLLL*HEGLVG
Trigger: CCCTACAAGTCCCTCATGGCACAGGAGAAGGGGGCA...GTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTTCTGCTTGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR GCA 90 bp AACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCCGAAGAAGGGCCATGTTaGTGGAAGCAACGGCGAGAA +
Preference number: 4 (lower is better)
Translates to: NVCSAHGQLGNRCVTRTPEEGPC*WKQRRE
Trigger: TTCTCGCCGTTGCTTCCAGCAACATGGCCCTTCTTC...GGGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR GCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATGTCTCTTGGGTTTCCTaGTCAGAAAATGTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHVSWVS*SENVPS
Trigger: AGAAGGGACATTTTCTGAGCAGGAAACCCAAGAGAC...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS-3UTR GCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATAATCCAAATTCCCAATaGCAAGCCCCACTTAGGATC +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHNPNSQ*QAPLRI
Trigger: GATCCTAAGTGGGGCTTGGCATTGGGAATTTGGATT...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS-3UTR GCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATAAGGGATGGGAAATCTaGCCTGATTTTCCAGATCCT +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHKGWEI*PDFPDP
Trigger: AGGATCTGGAAAATCAGGGCAGATTTCCCATCCCTT...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS-3UTR CCA 90 bp GTCAAGCAGAACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCGAAGGGCCATGTTGCTaGAAGCAACGGCGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: VKQNVCSAHGQLGNRCVTEGPCC*KQRREG
Trigger: TCCTTCTCGCCGTTGCTTCCAGCAACATGGCCCTTC...GGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTTCTGCTTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR CCA 90 bp CAGAACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCAGCCCACGGTCAGTTaGGCAACAGATGTGTCACCA +
Preference number: 4 (lower is better)
Translates to: QNVCSAHGQLGNRCVTRTQPTVS*ATDVSP
Trigger: TGGTGACACATCTGTTGCCCAACTGACCGTGGGCTG...AGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR CCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATCACAGGGAATCCCTCTaGGATATTATGTTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHHRESL*DIMFPV
Trigger: GACTGGAAACATAATATCCCAGAGGGATTCCCTGTG...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS-3UTR TCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATCAATACGTAAATGAATaGCCAAAAGTCCCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHQYVNE*PKVPSK
Trigger: CTTGCTGGGGACTTTTGGTCATTCATTTACGTATTG...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR TCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATCATCCCAGAAAGACATaGATGAATGAGTTGGTGAGT +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHHPRKT*MNELVS
Trigger: ACTCACCAACTCATTCATTCATGTCTTTCTGGGATG...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR CCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATGGCCTCCACAAGGTTTaGTGGAAACATATTTCTGAT +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHGLHKV*WKHISD
Trigger: ATCAGAAATATGTTTCCACCAAACCTTGTGGAGGCC...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR CCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATACCATATCCAAGGGATaGGAAATCTGCCCTGATTTT +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHTISKG*EICPDF
Trigger: AAAATCAGGGCAGATTTCCCATCCCTTGGATATGGT...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS-3UTR TCA 90 bp ATGAGTCAAGCAGAACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCCTTCTCCTGTGCCATaGGGGACTTGTAGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: MSQAERVFSPRSVGQQMCPSPVP*GTCRVS
Trigger: GGAAACCCTACAAGTCCCTCATGGCACAGGAGAAGG...ACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTTCTGCTTGACTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR TCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATCATTGCAGAAGGACATaGATGAATGAAAGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHHCRRT*MNERVR
Trigger: TCTCACTCTTTCATTCATTCATGTCCTTCTGCAATG...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR TCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATGAACAAAGCAGTGAATaGATCATTGCAGAAGGACAT +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHEQSSE*IIAEGH
Trigger: ATGTCCTTCTGCAATGATTCATTCACTGCTTTGTTC...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR CCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATCTCCACAAGGTTTGGTaGAAACATATTTCTGATCAG +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHLHKVW*KHISDQ
Trigger: CTGATCAGAAATATGTTTCCACCAAACCTTGTGGAG...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR TCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATGCAGAAAAGTGTGAATaGATGAATGAGTTAGTGAGT +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHAEKCE*MNELVS
Trigger: ACTCACTAACTCATTCATTCATTCACACTTTTCTGC...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR TCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATAAGGGAGTGAACAAGTaGACAAATCATTGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHKGVNK*TNHCRK
Trigger: TTTTCTGCAATGATTTGTTCACTTGTTCACTCCCTT...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR TCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATCTGAATAAATGTCAGTaGATGGCTTGGTCAATGTAT +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHLNKCQ*MAWSMY
Trigger: ATACATTGACCAAGCCATTCACTGACATTTATTCAG...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR CCA 90 bp AACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCCGGCCTCCACAAGGTTTaGTGGAAACATATTTCTGTG +
Preference number: 4 (lower is better)
Translates to: NVCSAHGQLGNRCVTRTPGLHKV*WKHISV
Trigger: CACAGAAATATGTTTCCACCAAACCTTGTGGAGGCC...GGGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR CCA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATGGTATTGACAAACTATaGTCTGCTAGTCAAATTCAG +
Preference number: 4 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHGIDKL*SASQIQ
Trigger: CTGAATTTGACTAGCAGACCATAGTTTGTCAATACC...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS-3UTR GCA 90 bp ATGAGTCAAGCAGAACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCAGGATGCCCACAGGTaGATACCAGATAATGATGCC +
Preference number: 4 (lower is better)
Translates to: MSQAERVFSPRSVGQQMCQDAHR*IPDNDA
Trigger: GGCATCATTATCTGGTATGCACCTGTGGGCATCCTG...ACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTTCTGCTTGACTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR GCA 90 bp ATGAGTCAAGCAGAACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCAATCAGGAACAGGATaGCCACAGGTGCATACCAGA +
Preference number: 4 (lower is better)
Translates to: MSQAERVFSPRSVGQQMCQSGTG*PQVHTR
Trigger: TCTGGTATGCACCTGTGGGCATCCTGTTCCTGATTG...ACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTTCTGCTTGACTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR CCA 90 bp AGTCAAGCAGAACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCATTTTCCAGGAAGCTaGTTCCGTTCTCCACTGAGA +
Preference number: 4 (lower is better)
Translates to: SQAERVFSPRSVGQQMCHHFPGS*FRSPLR
Trigger: TCTCAGTGGAGAACGGAACCAGCTTCCTGGAAAATG...GTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTTCTGCTTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR CCA 90 bp ATGAGTCAAGCAGAACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCTCCACAAGGTTTGGTaGAAACATATTTCTGTGACC +
Preference number: 4 (lower is better)
Translates to: MSQAERVFSPRSVGQQMCLHKVW*KHISVT
Trigger: GGTCACAGAAATATGTTTCCACCAAACCTTGTGGAG...ACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTTCTGCTTGACTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS GCA 90 bp TGCCATGGCTGCTCATGGTCGGCGTCCGGAGCGGCGGGGGCGGCCTaGCCGCGCCTCGGCCTGCGCGCTGCGCCCGGATGCAGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: CHGCSWSASGAAGAA*PRLGLRAAPGCRSR
Trigger: CCGGCTCCTGCATCCGGGCGCAGCGCGCAGGCCGAGGCGCGGGCAGGCCGCCCCCGCCGCTCCGGACGCCGACCATGAGCAGCCATGGCA
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597262.1
CDS CCA 90 bp CCTCGGAGGCCCCAGCATCCCTGGCGGAGCGCGGGGAACAGGCCCTaGCACCGCGGGACCCGCTCCAGCAGCCTCGGCGGAGGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: PRRPQHPWRSAGNRP*HRGTRSSSLGGGLG
Trigger: CCCCAGGCCTCCGCCGAGGCTGCTGGAGCGGGTCCCGCGGTGCCAGGGCCTGTTCCCCGCGCTCCGCCAGGGATGCTGGGGCCTCCGAGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS CCA 90 bp GGGACCCGCCAGGGACTGTGCAGCACCGGCGCGGGGACCGGACCGTaGAGGCACCGGCGCGGAGCCGGGACGCGCTATGCTGCGGGAGGG +
Preference number: 5 (lower is better)
Translates to: GTRQGLCSTGAGTGP*RHRRGAGTRYAAGG
Trigger: CCCTCCCGCAGCATAGCGCGTCCCGGCTCCGCGCCGGTGCCTCCACGGTCCGGTCCCCGCGCCGGTGCTGCACAGTCCCTGGCGGGTCCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000544886.6
ENST00000594383.2
ENST00000597262.1
CDS GCA 90 bp GACCGGACCGTGGAGGCACCGGCGCGGAGCCGGGACGCGCTATGCTaGGGGAGGGATCCGGGCCGGCCCTGCGCTCACGTGGGTGTGGGG +
Preference number: 5 (lower is better)
Translates to: DRTVEAPARSRDALC*GRDPGRPCAHVGVG
Trigger: CCCCACACCCACGTGAGCGCAGGGCCGGCCCGGATCCCTCCCGCAGCATAGCGCGTCCCGGCTCCGCGCCGGTGCCTCCACGGTCCGGTC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000594383.2
CDS GCA 90 bp GGGGACCGGACCGTGGAGGCACCGGCGCGGAGCCGGGACGCGCTATaGTGCGGGAGGGATCCGGGCCGGCCCTGCGCTCACGTGGGTGTG +
Preference number: 5 (lower is better)
Translates to: GDRTVEAPARSRDAL*CGRDPGRPCAHVGV
Trigger: CACACCCACGTGAGCGCAGGGCCGGCCCGGATCCCTCCCGCAGCATAGCGCGTCCCGGCTCCGCGCCGGTGCCTCCACGGTCCGGTCCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000594383.2
CDS GCA 90 bp ATGGCTGCTCATGGTCTATCGGCGTCCGGAGCGGCGGGGGCGGCCTaGCCGCGCCTCGGCCTGCGCGCTGCGCCCGGATGCAGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: MAAHGLSASGAAGAA*PRLGLRAAPGCRSR
Trigger: CCGGCTCCTGCATCCGGGCGCAGCGCGCAGGCCGAGGCGCGGGCAGGCCGCCCCCGCCGCTCCGGACGCCGATAGACCATGAGCAGCCAT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS GCA 90 bp AGGCGCGTGCGCAGTGCTCTCTGCTGCAGGCTTTCCTGCAGCCGCTaGAGCCAGCCCACCCGGCCCAGCCGCTGGCCGCTCTCCCGCAGG +
Preference number: 5 (lower is better)
Translates to: RRVRSALCCRLSCSR*SQPTRPSRWPLSRR
Trigger: CCTGCGGGAGAGCGGCCAGCGGCTGGGCCGGGTGGGCTGGCTGCAGCGGCTGCAGGAAAGCCTGCAGCAGAGAGCACTGCGCACGCGCCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000221742.7
ENST00000430939.6
ENST00000544886.6
ENST00000594383.2
ENST00000595863.1
ENST00000596697.1
ENST00000597262.1
ENST00000598504.5
ENST00000599636.1
ENST00000600144.5
ENST00000601761.1
CDS GCA 90 bp TGCAGGCGCAGGCGCGTGCGCAGTGCTCTCTGCTGCAGGCTTTCCTaGAGCCGCTGCAGCCAGCCCACCCGGCCCAGCCGCTGGCCGCTC +
Preference number: 5 (lower is better)
Translates to: CRRRRVRSALCCRLS*SRCSQPTRPSRWPL
Trigger: GAGCGGCCAGCGGCTGGGCCGGGTGGGCTGGCTGCAGCGGCTGCAGGAAAGCCTGCAGCAGAGAGCACTGCGCACGCGCCTGCGCCTGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000221742.7
ENST00000430939.6
ENST00000544886.6
ENST00000594383.2
ENST00000595863.1
ENST00000596697.1
ENST00000597262.1
ENST00000598504.5
ENST00000599636.1
ENST00000600144.5
ENST00000601761.1
CDS GCA 90 bp CCACCCGGCCCAGCCGCTGGCCGCTCTCCCGCAGGAACAGGCTGTTaGCATGGCTGCTCATGGTCTATCGGCGTCCGGAGCGGCGGGGGC +
Preference number: 5 (lower is better)
Translates to: PPGPAAGRSPAGTGC*HGCSWSIGVRSGGG
Trigger: GCCCCCGCCGCTCCGGACGCCGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCCAGCGGCTGGGCCGGGTGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS GCA 90 bp CACGTGCTCGAGGGTCATGGTCTGCAGGCGCAGGCGCGTGCGCAGTaGTCTCTGCTGCAGGCTTTCCTGCAGCCGCTGCAGCCAGCCCAC +
Preference number: 5 (lower is better)
Translates to: HVLEGHGLQAQARAQ*SLLQAFLQPLQPAH
Trigger: GTGGGCTGGCTGCAGCGGCTGCAGGAAAGCCTGCAGCAGAGAGCACTGCGCACGCGCCTGCGCCTGCAGACCATGACCCTCGAGCACGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000221742.7
ENST00000430939.6
ENST00000544886.6
ENST00000594383.2
ENST00000595863.1
ENST00000596697.1
ENST00000597262.1
ENST00000598504.5
ENST00000599636.1
ENST00000600144.5
ENST00000601761.1
CDS GCA 90 bp AGCGCAGCACGTGCTCGAGGGTCATGGTCTGCAGGCGCAGGCGCGTaGGCAGTGCTCTCTGCTGCAGGCTTTCCTGCAGCCGCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: SAARARGSWSAGAGA*AVLSAAGFPAAAAA
Trigger: GGCTGCAGCGGCTGCAGGAAAGCCTGCAGCAGAGAGCACTGCGCACGCGCCTGCGCCTGCAGACCATGACCCTCGAGCACGTGCTGCGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000221742.7
ENST00000430939.6
ENST00000544886.6
ENST00000594383.2
ENST00000595863.1
ENST00000596697.1
ENST00000597262.1
ENST00000598504.5
ENST00000599636.1
ENST00000600144.5
ENST00000601761.1
CDS GCA 90 bp GCGTTTCGGCGCAGGAAGCGCAGCACGTGCTCGAGGGTCATGGTCTaGAGGCGCAGGCGCGTGCGCAGTGCTCTCTGCTGCAGGCTTTCC +
Preference number: 5 (lower is better)
Translates to: AFRRRKRSTCSRVMV*RRRRVRSALCCRLS
Trigger: GGAAAGCCTGCAGCAGAGAGCACTGCGCACGCGCCTGCGCCTGCAGACCATGACCCTCGAGCACGTGCTGCGCTTCCTGCGCCGAAACGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000221742.7
ENST00000430939.6
ENST00000544886.6
ENST00000594383.2
ENST00000595863.1
ENST00000596697.1
ENST00000597262.1
ENST00000598504.5
ENST00000599636.1
ENST00000600144.5
ENST00000601761.1
CDS GCA 90 bp ACAACAGCCAGGGAGAGGGCTCCGCTGCCCCCTTCTCCTTGCGGGTaGACCTTCCGGCCTTGGCCACTTGGCTGCTGTGTGCCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: TTARERAPLPPSPCG*TFRPWPLGCCVPLG
Trigger: GCCCAAGGGCACACAGCAGCCAAGTGGCCAAGGCCGGAAGGTGCACCCGCAAGGAGAAGGGGGCAGCGGAGCCCTCTCCCTGGCTGTTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS-3UTR CAA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATCGGTGCAGCCCCTCCTaGGAGCCCTTCCCGGGATGG +
Preference number: 5 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHRCSPS*EPFPGW
Trigger: CCATCCCGGGAAGGGCTCCAAGGAGGGGCTGCACCG...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS GCA 90 bp ACCGTCAGCAGAATGAAGGCGTTTCGGCGCAGGAAGCGCAGCACGTaGTCGAGGGTCATGGTCTGCAGGCGCAGGCGCGTGCGCAGTGCT +
Preference number: 5 (lower is better)
Translates to: TVSRMKAFRRRKRST*SRVMVCRRRRVRSA
Trigger: AGCACTGCGCACGCGCCTGCGCCTGCAGACCATGACCCTCGAGCACGTGCTGCGCTTCCTGCGCCGAAACGCCTTCATTCTGCTGACGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000221742.7
ENST00000430939.6
ENST00000544886.6
ENST00000594383.2
ENST00000595863.1
ENST00000596697.1
ENST00000597262.1
ENST00000598504.5
ENST00000599636.1
ENST00000600144.5
ENST00000601761.1
CDS GCA 90 bp CCACCCGGCCCAGCCGCTGGCCGCTCTCCCGCAGGAACAGGCTGTTaGCATGGCTGCTCATGGTCTATCGACATGCGACAGAGTGTGACC +
Preference number: 5 (lower is better)
Translates to: PPGPAAGRSPAGTGC*HGCSWSIDMRQSVT
Trigger: GGTCACACTCTGTCGCATGTCGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCCAGCGGCTGGGCCGGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430939.6
ENST00000599636.1
CDS GCA 90 bp CCACCCGGCCCAGCCGCTGGCCGCTCTCCCGCAGGAACAGGCTGTTaGCATGGCTGCTCATGGTCTATCTGCGGGAAACAGAGAAGCCTG +
Preference number: 5 (lower is better)
Translates to: PPGPAAGRSPAGTGC*HGCSWSICGKQRSL
Trigger: CAGGCTTCTCTGTTTCCCGCAGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCCAGCGGCTGGGCCGGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596697.1
CDS CCA 90 bp CGGCCCAGCCGCTGGCCGCTCTCCCGCAGGAACAGGCTGTTGCCATaGCTGCTCATGGTCTATCTGCGGGAAACAGAGAAGCCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: RPSRWPLSRRNRLLP*LLMVYLRETEKPGA
Trigger: AGCCCCAGGCTTCTCTGTTTCCCGCAGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCCAGCGGCTGGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596697.1
CDS GCA 90 bp CCACCCGGCCCAGCCGCTGGCCGCTCTCCCGCAGGAACAGGCTGTTaGCATGGCTGCTCATGGTCTATCTGGAAAAGAACCTGGACGAGC +
Preference number: 5 (lower is better)
Translates to: PPGPAAGRSPAGTGC*HGCSWSIWKRTWTS
Trigger: GCTCGTCCAGGTTCTTTTCCAGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCCAGCGGCTGGGCCGGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595863.1
CDS GCA 90 bp CCAGCCGCTGGCCGCTCTCCCGCAGGAACAGGCTGTTGCCATGGCTaGTCATGGTCTATCTGCGGGAAACAGAGAAGCCTGGGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: PAAGRSPAGTGCCHG*SWSICGKQRSLGLV
Trigger: CACCAGCCCCAGGCTTCTCTGTTTCCCGCAGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCCAGCGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596697.1
CDS GCA 90 bp AAGAACCCCTGCCCATTGCTCTGTCAGGCCCTTCCTCCCGCCTCTTaGCCTTGGACCATCCCTTCAGCCCCAAGCTCCCACCACCCTCCG +
Preference number: 5 (lower is better)
Translates to: KNPCPLLCQALPPAS*PWTIPSAPSSHHPP
Trigger: CGGAGGGTGGTGGGAGCTTGGGGCTGAAGGGATGGTCCAAGGGCAAGAGGCGGGAGGAAGGGCCTGACAGAGCAATGGGCAGGGGTTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596697.1
CDS GCA 90 bp CCACCCGGCCCAGCCGCTGGCCGCTCTCCCGCAGGAACAGGCTGTTaGCATGGCTGCTCATGGTCTATCAGAACGACCAGGAGAAAAGCG +
Preference number: 5 (lower is better)
Translates to: PPGPAAGRSPAGTGC*HGCSWSIRTTRRKA
Trigger: CGCTTTTCTCCTGGTCGTTCTGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCCAGCGGCTGGGCCGGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594383.2
CDS CCA 90 bp GCTGGCCGCTCTCCCGCAGGAACAGGCTGTTGCCATGGCTGCTCATaGTCTATCTGCGGGAAACAGAGAAGCCTGGGGCTGGTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: AGRSPAGTGCCHGCS*SICGKQRSLGLVRA
Trigger: GGCCCTCACCAGCCCCAGGCTTCTCTGTTTCCCGCAGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596697.1
CDS-3UTR CAA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATAGGGCGTTGATGCCATaGGCGGAGCCAGGCACGGGT +
Preference number: 5 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHRALMP*AEPGTG
Trigger: ACCCGTGCCTGGCTCCGCCAATGGCATCAACGCCCT...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR CAA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATACGAGGCCCAGGGCGTaGATGCCATTGGCGGAGCCA +
Preference number: 5 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHTRPRA*MPLAEP
Trigger: TGGCTCCGCCAATGGCATCAACGCCCTGGGCCTCGT...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR CAA 90 bp TGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCCCTCCCCGCAGTGCCATCCATGTaGACCGTGGCGCCCACGGGC +
Preference number: 5 (lower is better)
Translates to: CSAHGQLGNRCVTRTPLPAVPSM*TVAPTG
Trigger: GCCCGTGGGCGCCACGGTCAACATGGATGGCACTGC...GGGGAGGGGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR CAA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATGGCTGCTGTGTGCCCTaGGGCCAACTCCTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHGCCVP*GQLLSL
Trigger: GAGGGAGAGGAGTTGGCCCAAGGGCACACAGCAGCC...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS-3UTR CAA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATTCCGGCCTTGGCCACTaGGCTGCTGTGTGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHSGLGH*AAVCPW
Trigger: CCAAGGGCACACAGCAGCCAAGTGGCCAAGGCCGGA...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS TCA 90 bp GGCGTGGGCAGATGGCGAAGGCTGCGAAGGGTAATGAGCGCTTCCTaGGGACTCTCAGAAGGCGGGGGTGGCTGGGTGTTTTGGCTCACG +
Preference number: 5 (lower is better)
Translates to: GVGRWRRLRRVMSAS*GLSEGGGGWVFWLT
Trigger: CGTGAGCCAAAACACCCAGCCACCCCCGCCTTCTGAGAGTCCTCAGGAAGCGCTCATTACCCTTCGCAGCCTTCGCCATCTGCCCACGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596697.1
CDS-3UTR CAA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATCGCCCCGTGGCCTTGTaGTCCAGGGATGCCATACCT +
Preference number: 5 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHRPVAL*SRDAIP
Trigger: AGGTATGGCATCCCTGGACAACAAGGCCACGGGGCG...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR CAA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATCGCAGGAACAGGCTGTaGCCATGGCTGCTCATGGTC +
Preference number: 5 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHRRNRL*PWLLMV
Trigger: GACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCG...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR CAA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATATCCGCCCCGTGGCCTaGTTGTCCAGGGATGCCATA +
Preference number: 5 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHIRPVA*LSRDAI
Trigger: TATGGCATCCCTGGACAACAAGGCCACGGGGCGGAT...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS CCA 90 bp CAGCAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTaGCTCCACCATCCCGTGGGCACAGACCAGGACTCACCAGATAAT +
Preference number: 5 (lower is better)
Translates to: QQALRQLPHSLTSQL*LHHPVGTDQDSPDN
Trigger: ATTATCTGGTGAGTCCTGGTCTGTGCCCACGGGATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR CAA 90 bp GTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCCCTCCCCGCAGGAACAGGCTGTaGCCATGGCTGCTCATGGTC +
Preference number: 5 (lower is better)
Translates to: VFSPRSVGQQMCHQDSPPRRNRL*PWLLMV
Trigger: GACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCG...GGGAGGGGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR CAA 90 bp AACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCCACGAGGCCCAGGGCGTaGATGCCATTGGCGGAGCCA +
Preference number: 5 (lower is better)
Translates to: NVCSAHGQLGNRCVTRTPTRPRA*MPLAEP
Trigger: TGGCTCCGCCAATGGCATCAACGCCCTGGGCCTCGT...GGGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR CAA 90 bp ACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCCCCACATAGCACTCTCGTaGCCTCCCCGTCCCCGGGAT +
Preference number: 5 (lower is better)
Translates to: TCVQPTVSWATDVSPGLPHIALS*PPRPRD
Trigger: ATCCCGGGGACGGGGAGGCAACGAGAGTGCTATGTG...GGGGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR CAA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATGTAGGTCCCTGGCCTTaGTGTTTTGCTGCCACTGGC +
Preference number: 5 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHVGPWP*CFAATG
Trigger: GCCAGTGGCAGCAAAACACAAAGGCCAGGGACCTAC...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS GCA 90 bp TCTCCCGCAGGAACAGGCTGTTGCCATGGCTGCTCATGGTCTATCTaGGGGAAACAGAGAAGCCTGGGGCTGGTGAGGGCCAGGACAGAA +
Preference number: 5 (lower is better)
Translates to: SPAGTGCCHGCSWSI*GKQRSLGLVRARTE
Trigger: TTCTGTCCTGGCCCTCACCAGCCCCAGGCTTCTCTGTTTCCCGCAGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596697.1
CDS-3UTR CAA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATGTGGGTCTTTCCCACTaGGTTCTCCCGACCTCTAGA +
Preference number: 5 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHVGLSH*VLPTSR
Trigger: TCTAGAGGTCGGGAGAACCAAGTGGGAAAGACCCAC...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS-3UTR CAA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATCCACTGCACTCCAACTaGGGTGACAGCGTAAAACCC +
Preference number: 5 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHPLHSN*GDSVKP
Trigger: GGGTTTTACGCTGTCACCCAAGTTGGAGTGCAGTGG...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS TCA 90 bp CAAGGCCCGAGTGACATTTTCCAGGAAGCTGGTTCCGTTCTCCACTaGGAATGGAGGAGGCATGGAGGCACCCGGCTCAGACCCGTTCTC +
Preference number: 5 (lower is better)
Translates to: QGPSDIFQEAGSVLH*EWRRHGGTRLRPVL
Trigger: GAGAACGGGTCTGAGCCGGGTGCCTCCATGCCTCCTCCATTCTCAGTGGAGAACGGAACCAGCTTCCTGGAAAATGTCACTCGGGCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221742.7
ENST00000430939.6
ENST00000544886.6
ENST00000594383.2
ENST00000598504.5
ENST00000600144.5
CDS TCA 90 bp CTCCAGCTCCCGCTGAGACAAGTGCTCGATGACGGCCGCTCCAATTaGGTCCCCCAGTACGTTGGTCATTGTGCGAAGCCGGTCAAGGAA +
Preference number: 5 (lower is better)
Translates to: LQLPLRQVLDDGRSN*VPQYVGHCAKPVKE
Trigger: TTCCTTGACCGGCTTCGCACAATGACCAACGTACTGGGGGACTCAATTGGAGCGGCCGTCATCGAGCACTTGTCTCAGCGGGAGCTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221742.7
ENST00000430939.6
ENST00000594383.2
ENST00000600144.5
CDS GCA 90 bp GCGGAGCCAGGCACGGGTACAGTCTCCTCAAAGCTCAGCATCTCCTaGAGGGTACCCAAGGCCCGAGTGACATTTTCCAGGAAGCTGGTT +
Preference number: 5 (lower is better)
Translates to: AEPGTGTVSSKLSIS*RVPKARVTFSRKLV
Trigger: AACCAGCTTCCTGGAAAATGTCACTCGGGCCTTGGGTACCCTGCAGGAGATGCTGAGCTTTGAGGAGACTGTACCCGTGCCTGGCTCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221742.7
ENST00000430939.6
ENST00000544886.6
ENST00000594383.2
ENST00000598504.5
ENST00000600144.5
CDS-3UTR CAA 90 bp TCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCCCTCCCCAGCTGCGTCTTGAACTGTTaGAAGCAGGCCTCCACAAGG +
Preference number: 5 (lower is better)
Translates to: SAHGQLGNRCVTRTPLPSCVLNC*KQASTR
Trigger: CCTTGTGGAGGCCTGCTTCAAACAGTTCAAGACGCA...GCTGGGGAGGGGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR CAA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATTGCGTCTTGAACTGTTaGAAGCAGGCCTCCACAAGG +
Preference number: 5 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHCVLNC*KQASTR
Trigger: CCTTGTGGAGGCCTGCTTCAAACAGTTCAAGACGCA...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR CAA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATGTGCTGTACTGCGTCTaGAACTGTTTGAAGCAGGCC +
Preference number: 5 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHVLYCV*NCLKQA
Trigger: GGCCTGCTTCAAACAGTTCAAGACGCAGTACAGCAC...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR CAA 90 bp TCAAGCAGAACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAAGGGCGTTGATGCCATaGGCGGAGCCAGGCACGGGT +
Preference number: 5 (lower is better)
Translates to: SSRTCVQPTVSWATDVSPRALMP*AEPGTG
Trigger: ACCCGTGCCTGGCTCCGCCAATGGCATCAACGCCCT...TGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTTCTGCTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR CAA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATCTGAGGACTCTGCCCTaGTGTTTCATGCCACCAATG +
Preference number: 5 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHLRTLP*CFMPPM
Trigger: CATTGGTGGCATGAAACACAAGGGCAGAGTCCTCAG...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR CAA 90 bp ACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCCCTCAGCCCACGGTCAGTaGGGCAACAGATGTGTCACC +
Preference number: 5 (lower is better)
Translates to: TCVQPTVSWATDVSPGLPSAHGQ*GNRCVT
Trigger: GGTGACACATCTGTTGCCCAACTGACCGTGGGCTGA...GGGGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR CAA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATCCCGAGGCTAGAGTTTaGTCCGGTTCCTTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHPEARV*SGSFLF
Trigger: GAAGAGAAAGGAACCGGACAAAACTCTAGCCTCGGG...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS-3UTR CAA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATAGCCACAGCAGGAAGTaGCCTGTAGATACCAAGGGA +
Preference number: 5 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHSHSRK*PVDTKG
Trigger: TCCCTTGGTATCTACAGGCAACTTCCTGCTGTGGCT...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS TCA 90 bp TCTGGGGGCTGCCCCAGTGGCTCAAGGGAAATTAACAAGCCTTTGTaGAGTGCCAGCTGCATACGGAGCCCTAGACAAAGCACCCGGAGG +
Preference number: 5 (lower is better)
Translates to: SGGCPSGSREINKPL*SASCIRSPRQSTRR
Trigger: CCTCCGGGTGCTTTGTCTAGGGCTCCGTATGCAGCTGGCACTTCACAAAGGCTTGTTAATTTCCCTTGAGCCACTGGGGCAGCCCCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596697.1
CDS-3UTR CAA 90 bp ACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACTCCCCCCAGTACGTTGGTCATaGTGCGAAGCCGGTCAAGGA +
Preference number: 5 (lower is better)
Translates to: TCVQPTVSWATDVSPGLPPVRWS*CEAGQG
Trigger: TCCTTGACCGGCTTCGCACAATGACCAACGTACTGG...GGGGAGTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR CAA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATAACAAGGAAGATGGCTaGGCCGACCCCACAGAAAAT +
Preference number: 5 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHNKEDG*ADPTEN
Trigger: ATTTTCTGTGGGGTCGGCCAAGCCATCTTCCTTGTT...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS-3UTR CAA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATTTGTTGGGACAGAGATaGTACGGGCCACAAAGCTCA +
Preference number: 5 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHLLGQR*YGPQSS
Trigger: TGAGCTTTGTGGCCCGTACAATCTCTGTCCCAACAA...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS-3UTR CAA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATCGAGCTGCAGGTTTCTaGGAGGTCTCAGTTTTACCA +
Preference number: 5 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHRAAGF*EVSVLP
Trigger: TGGTAAAACTGAGACCTCCAAGAAACCTGCAGCTCG...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS TCA 90 bp GACCATCCCTTCAGCCCCAAGCTCCCACCACCCTCCGAATCTCCTTaGTCAAACTGTGTACTTCCCCCTGACCTGTTTGAAGCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: DHPFSPKLPPPSESP*SNCVLPPDLFEAGL
Trigger: GAGGCCTGCTTCAAACAGGTCAGGGGGAAGTACACAGTTTGATCAAGGAGATTCGGAGGGTGGTGGGAGCTTGGGGCTGAAGGGATGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596697.1
CDS-3UTR CAA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATCTCATAATAGCCTCATaGAGGCTGTCGAAGAAGTCC +
Preference number: 5 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHLIIAS*RLSKKS
Trigger: GGACTTCTTCGACAGCCTCAATGAGGCTATTATGAG...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS-3UTR CAA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATGCTACAATGCCTGAGTaGAGTTGTTGGGACAGAGAT +
Preference number: 5 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHATMPE*SCWDRD
Trigger: ATCTCTGTCCCAACAACTCAACTCAGGCATTGTAGC...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS-3UTR CAA 90 bp ATGAGTCAAGCAGAACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTGAGTCCCCCAGTACGTaGGTCATTGTGCGAAGCCGG +
Preference number: 5 (lower is better)
Translates to: MSQAERVFSPRSVGQQMCESPST*VIVRSR
Trigger: CCGGCTTCGCACAATGACCAACGTACTGGGGGACTC...ACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTTCTGCTTGACTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR CAA 90 bp TCAAGCAGAACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGAAGAAGGGCCATGTaGCTGGAAGCAACGGCGAGA +
Preference number: 5 (lower is better)
Translates to: SSRTCVQPTVSWATDVSPGRRAM*LEATAR
Trigger: TCTCGCCGTTGCTTCCAGCAACATGGCCCTTCTTCC...TGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTTCTGCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR CAA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATGTAAAACCCTGTCTCTaGGGTTTCCTGCTCAGAAAA +
Preference number: 5 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHVKPCL*GFLLRK
Trigger: TTTTCTGAGCAGGAAACCCAAGAGACAGGGTTTTAC...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS TCA 90 bp TCTCCTCAAAGCTCAGCATCTCCTGCAGGGTACCCAAGGCCCGAGTaGCATTTTCCAGGAAGCTGGTTCCGTTCTCCACTGAGAATGGAG +
Preference number: 5 (lower is better)
Translates to: SPQSSASPAGYPRPE*HFPGSWFRSPLRME
Trigger: CTCCATTCTCAGTGGAGAACGGAACCAGCTTCCTGGAAAATGTCACTCGGGCCTTGGGTACCCTGCAGGAGATGCTGAGCTTTGAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221742.7
ENST00000430939.6
ENST00000544886.6
ENST00000594383.2
ENST00000598504.5
ENST00000600144.5
CDS-3UTR CAA 90 bp AGCAGAACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGAGTGCTGTACTGCGTCTaGAACTGTTTGAAGCAGGCC +
Preference number: 5 (lower is better)
Translates to: SRTCVQPTVSWATDVSPGVLYCV*NCLKQA
Trigger: GGCCTGCTTCAAACAGTTCAAGACGCAGTACAGCAC...TCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTTCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR CAA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATCTCATGCATTACCTATaGTCTACAGCTGCTTTCAAG +
Preference number: 5 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHLMHYL*STAAFK
Trigger: CTTGAAAGCAGCTGTAGACAATAGGTAATGCATGAG...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS CCA 90 bp CTGCTCATGGTCTATCGACATGCGACAGAGTGTGACCTGGACAGCTaGAAGCGCTTAGGACATCCTAAAGCTGGAAGAAGGGCCATGTTG +
Preference number: 5 (lower is better)
Translates to: LLMVYRHATECDLDS*KRLGHPKAGRRAML
Trigger: CAACATGGCCCTTCTTCCAGCTTTAGGATGTCCTAAGCGCTTCCAGCTGTCCAGGTCACACTCTGTCGCATGTCGATAGACCATGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430939.6
ENST00000599636.1
CDS CCA 90 bp AAGAAGGGCCATGTTGCTGGAAGCAACGGCGAGAAGGATGCTAGATaGGCTCTTTCTCAAGGAGTCAGGATGCCAGTGCACTTAGGCCAA +
Preference number: 5 (lower is better)
Translates to: KKGHVAGSNGEKDAR*ALSQGVRMPVHLGQ
Trigger: TTGGCCTAAGTGCACTGGCATCCTGACTCCTTGAGAAAGAGCCCATCTAGCATCCTTCTCGCCGTTGCTTCCAGCAACATGGCCCTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599636.1
CDS-3UTR CAA 90 bp AGTCAAGCAGAACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCTGAGGACTCTGCCCTaGTGTTTCATGCCACCAATG +
Preference number: 5 (lower is better)
Translates to: SQAERVFSPRSVGQQMCHLRTLP*CFMPPM
Trigger: CATTGGTGGCATGAAACACAAGGGCAGAGTCCTCAG...GTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTTCTGCTTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR CAA 90 bp GCAGAACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGTCACCAGGACCTCATAATAGCCTCATaGAGGCTGTCGAAGAAGTCC +
Preference number: 5 (lower is better)
Translates to: AERVFSPRSVGQQMCHQDLIIAS*RLSKKS
Trigger: GGACTTCTTCGACAGCCTCAATGAGGCTATTATGAG...GTCCTGGTGACACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS-3UTR CAA 90 bp CAAGCCCTTCGGCAGCTTCCCCACAGCCTGACTTCCCAGCTCTGGCTCCACCATGCAGTGAATGAATCATaGCAGAAGGACATGAATGAA +
Preference number: 5 (lower is better)
Translates to: QALRQLPHSLTSQLWLHHAVNES*QKDMNE
Trigger: TTCATTCATGTCCTTCTGCAATGATTCATTCACTGC...ATGGTGGAGCCAGAGCTGGGAAGTCAGGCTGTGGGGAAGCTGCCGAAGGGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000598504.5
CDS GCA 90 bp CCTTGCCCTCCTCAACTCCCCACCATATCCAAGGGATGGGAAATCTaGCCTGATTTTCCAGATCCTGCGTCCTCTAGAGCTAATCCAAAT +
Preference number: 5 (lower is better)
Translates to: PCPPQLPTISKGWEI*PDFPDPASSRANPN
Trigger: ATTTGGATTAGCTCTAGAGGACGCAGGATCTGGAAAATCAGGGCAGATTTCCCATCCCTTGGATATGGTGGGGAGTTGAGGAGGGCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000598504.5
ENST00000600144.5
ENST00000601761.1
CDS GCA 90 bp CTAGAGCTAATCCAAATTCCCAATGCCAAGCCCCACTTAGGATCCTaGTCCAAATGGACCCATCTCCTGAAACCACAATGCTGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LELIQIPNAKPHLGS*SKWTHLLKPQCCFS
Trigger: GGAGAAGCAGCATTGTGGTTTCAGGAGATGGGTCCATTTGGAGCAGGATCCTAAGTGGGGCTTGGCATTGGGAATTTGGATTAGCTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598504.5
ENST00000601761.1
CDS GCA 90 bp GATTTTCCAGATCCTGCGTCCTCTAGAGCTAATCCAAATTCCCAATaGCAAGCCCCACTTAGGATCCTGCTCCAAATGGACCCATCTCCT +
Preference number: 5 (lower is better)
Translates to: DFPDPASSRANPNSQ*QAPLRILLQMDPSP
Trigger: AGGAGATGGGTCCATTTGGAGCAGGATCCTAAGTGGGGCTTGGCATTGGGAATTTGGATTAGCTCTAGAGGACGCAGGATCTGGAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000598504.5
ENST00000600144.5
ENST00000601761.1
CDS CCA 90 bp GCTCATGGTCTATCTGAATTCAACCAGGTCGAGCTGCAGGTTTCTTaGAGGTCTCAGTTTTACCAGTACGTAGGTCCCTGGCCTTTGTGT +
Preference number: 5 (lower is better)
Translates to: AHGLSEFNQVELQVS*RSQFYQYVGPWPLC
Trigger: ACACAAAGGCCAGGGACCTACGTACTGGTAAAACTGAGACCTCCAAGAAACCTGCAGCTCGACCTGGTTGAATTCAGATAGACCATGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598504.5
ENST00000600144.5
ENST00000601761.1
CDS-3UTR CAA 90 bp AATGAGTCAAGCAGAACGTGTGTTCAGCCCACGGTCAGTTGGGCAACAGATGTGAGGCCTCCACAAGGTTaGGTGGAAACATATTTCTGT +
Preference number: 5 (lower is better)
Translates to: NESSRTCVQPTVSWATDVRPPQG*VETYFC
Trigger: ACAGAAATATGTTTCCACCAAACCTTGTGGAGGCCT...CACATCTGTTGCCCAACTGACCGTGGGCTGAACACACGTTCTGCTTGACTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430939.6
CDS TCA 90 bp AGGACAGGTCTTGGCAGGAAAACGTCAAGTCTCCAGAATCATTCCTaGGAATGGCTGGGAAGAGGAGGAAACCACAAAAATAATGGACCT +
Preference number: 5 (lower is better)
Translates to: RTGLGRKTSSLQNHS*EWLGRGGNHKNNGP
Trigger: AGGTCCATTATTTTTGTGGTTTCCTCCTCTTCCCAGCCATTCTCAGGAATGATTCTGGAGACTTGACGTTTTCCTGCCAAGACCTGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596697.1
CDS TCA 90 bp GAATGGCTGGGAAGAGGAGGAAACCACAAAAATAATGGACCTTTTTaGCACACCCTGACTCCAGCCCACTCTTATTTCACTGAGATCATC +
Preference number: 5 (lower is better)
Translates to: EWLGRGGNHKNNGPF*HTLTPAHSYFTEII
Trigger: GATGATCTCAGTGAAATAAGAGTGGGCTGGAGTCAGGGTGTGTCAAAAAGGTCCATTATTTTTGTGGTTTCCTCCTCTTCCCAGCCATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000596697.1
CDS TCA 90 bp TCATGCATTACCTATTGTCTACAGCTGCTTTCAAGCTACAATGCCTaGGTTGAGTTGTTGGGACAGAGATTGTACGGGCCACAAAGCTCA +
Preference number: 5 (lower is better)
Translates to: SCITYCLQLLSSYNA*VELLGQRLYGPQSS
Trigger: TGAGCTTTGTGGCCCGTACAATCTCTGTCCCAACAACTCAACTCAGGCATTGTAGCTTGAAAGCAGCTGTAGACAATAGGTAATGCATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS CCA 90 bp ATTGTCTACAGCTGCTTTCAAGCTACAATGCCTGAGTTGAGTTGTTaGGACAGAGATTGTACGGGCCACAAAGCTCAAAATGTTTACTCT +
Preference number: 5 (lower is better)
Translates to: IVYSCFQATMPELSC*DRDCTGHKAQNVYS
Trigger: AGAGTAAACATTTTGAGCTTTGTGGCCCGTACAATCTCTGTCCCAACAACTCAACTCAGGCATTGTAGCTTGAAAGCAGCTGTAGACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS GCA 72 bp GTGGAGGCACCGGCGCGGAGCCGGGACGCGCTATGCTaGGGGAGGGATCCGGGCCGGCCCTGCGCTCACGTG +
Preference number: 6 (lower is better)
Translates to: VEAPARSRDALC*GRDPGRPCAHV
Trigger: CACGTGAGCGCAGGGCCGGCCCGGATCCCTCCCGCAGCATAGCGCGTCCCGGCTCCGCGCCGGTGCCTCCAC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000594383.2
CDS GCA 72 bp ACCGTGGAGGCACCGGCGCGGAGCCGGGACGCGCTATaGTGCGGGAGGGATCCGGGCCGGCCCTGCGCTCAC +
Preference number: 6 (lower is better)
Translates to: TVEAPARSRDAL*CGRDPGRPCAH
Trigger: GTGAGCGCAGGGCCGGCCCGGATCCCTCCCGCAGCATAGCGCGTCCCGGCTCCGCGCCGGTGCCTCCACGGT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544886.6
ENST00000594383.2
CDS GCA 72 bp AGGCGCGTGCGCAGTGCTCTCTGCTGCAGGCTTTCCTaGAGCCGCTGCAGCCAGCCCACCCGGCCCAGCCGC +
Preference number: 6 (lower is better)
Translates to: RRVRSALCCRLS*SRCSQPTRPSR
Trigger: GCGGCTGGGCCGGGTGGGCTGGCTGCAGCGGCTGCAGGAAAGCCTGCAGCAGAGAGCACTGCGCACGCGCCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000221742.7
ENST00000430939.6
ENST00000544886.6
ENST00000594383.2
ENST00000595863.1
ENST00000596697.1
ENST00000597262.1
ENST00000598504.5
ENST00000599636.1
ENST00000600144.5
ENST00000601761.1
CDS CCA 72 bp CGCTGGCCGCTCTCCCGCAGGAACAGGCTGTTGCCATaGCTGCTCATGGTCGGCGTCCGGAGCGGCGGGGGC +
Preference number: 6 (lower is better)
Translates to: RWPLSRRNRLLP*LLMVGVRSGGG
Trigger: GCCCCCGCCGCTCCGGACGCCGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCCAGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597262.1
CDS CAA 90 bp CCCACCCGGCCCAGCCGCTGGCCGCTCTCCCGCAGGAACAGGCTGTaGCCATGGCTGCTCATGGTCTATCGGCGTCCGGAGCGGCGGGGG +
Preference number: 6 (lower is better)
Translates to: PTRPSRWPLSRRNRL*PWLLMVYRRPERRG
Trigger: CCCCCGCCGCTCCGGACGCCGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCCAGCGGCTGGGCCGGGTGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS GCA 72 bp CCAGCCGCTGGCCGCTCTCCCGCAGGAACAGGCTGTTaGCATGGCTGCTCATGGTCGGCGTCCGGAGCGGCG +
Preference number: 6 (lower is better)
Translates to: PAAGRSPAGTGC*HGCSWSASGAA
Trigger: CGCCGCTCCGGACGCCGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCCAGCGGCTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597262.1
CDS CAA 72 bp CCCAGCCGCTGGCCGCTCTCCCGCAGGAACAGGCTGTaGCCATGGCTGCTCATGGTCGGCGTCCGGAGCGGC +
Preference number: 6 (lower is better)
Translates to: PSRWPLSRRNRL*PWLLMVGVRSG
Trigger: GCCGCTCCGGACGCCGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCCAGCGGCTGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597262.1
CDS GCA 72 bp GTCTGCAGGCGCAGGCGCGTGCGCAGTGCTCTCTGCTaGAGGCTTTCCTGCAGCCGCTGCAGCCAGCCCACC +
Preference number: 6 (lower is better)
Translates to: VCRRRRVRSALC*RLSCSRCSQPT
Trigger: GGTGGGCTGGCTGCAGCGGCTGCAGGAAAGCCTGCAGCAGAGAGCACTGCGCACGCGCCTGCGCCTGCAGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000221742.7
ENST00000430939.6
ENST00000544886.6
ENST00000594383.2
ENST00000595863.1
ENST00000596697.1
ENST00000597262.1
ENST00000598504.5
ENST00000599636.1
ENST00000600144.5
ENST00000601761.1
CDS GCA 72 bp GGCCGCTCTCCCGCAGGAACAGGCTGTTGCCATGGCTaGTCATGGTCTATCGGCGTCCGGAGCGGCGGGGGC +
Preference number: 6 (lower is better)
Translates to: GRSPAGTGCCHG*SWSIGVRSGGG
Trigger: GCCCCCGCCGCTCCGGACGCCGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS GCA 72 bp ATGGTCTGCAGGCGCAGGCGCGTGCGCAGTGCTCTCTaGTGCAGGCTTTCCTGCAGCCGCTGCAGCCAGCCC +
Preference number: 6 (lower is better)
Translates to: MVCRRRRVRSAL*CRLSCSRCSQP
Trigger: GGGCTGGCTGCAGCGGCTGCAGGAAAGCCTGCAGCAGAGAGCACTGCGCACGCGCCTGCGCCTGCAGACCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000221742.7
ENST00000430939.6
ENST00000544886.6
ENST00000594383.2
ENST00000595863.1
ENST00000596697.1
ENST00000597262.1
ENST00000598504.5
ENST00000599636.1
ENST00000600144.5
ENST00000601761.1
CDS GCA 72 bp CGCAGGAAGCGCAGCACGTGCTCGAGGGTCATGGTCTaGAGGCGCAGGCGCGTGCGCAGTGCTCTCTGCTGC +
Preference number: 6 (lower is better)
Translates to: RRKRSTCSRVMV*RRRRVRSALCC
Trigger: GCAGCAGAGAGCACTGCGCACGCGCCTGCGCCTGCAGACCATGACCCTCGAGCACGTGCTGCGCTTCCTGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000221742.7
ENST00000430939.6
ENST00000544886.6
ENST00000594383.2
ENST00000595863.1
ENST00000596697.1
ENST00000597262.1
ENST00000598504.5
ENST00000599636.1
ENST00000600144.5
ENST00000601761.1
CDS CCA 72 bp CGCTGGCCGCTCTCCCGCAGGAACAGGCTGTTGCCATaGCTGCTCATGGTCTATCGGCGTCCGGAGCGGCGG +
Preference number: 6 (lower is better)
Translates to: RWPLSRRNRLLP*LLMVYRRPERR
Trigger: CCGCCGCTCCGGACGCCGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCCAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS CAA 90 bp GAGGGCTCCGCTGCCCCCTTCTCCTTGCGGGTGCACCTTCCGGCCTaGGCCACTTGGCTGCTGTGTGCCCTTGGGCCAACTCCTCTCCCT +
Preference number: 6 (lower is better)
Translates to: EGSAAPFSLRVHLPA*ATWLLCALGPTPLP
Trigger: AGGGAGAGGAGTTGGCCCAAGGGCACACAGCAGCCAAGTGGCCAAGGCCGGAAGGTGCACCCGCAAGGAGAAGGGGGCAGCGGAGCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS GCA 72 bp GAGGGTCATGGTCTGCAGGCGCAGGCGCGTGCGCAGTaGTCTCTGCTGCAGGCTTTCCTGCAGCCGCTGCAG +
Preference number: 6 (lower is better)
Translates to: EGHGLQAQARAQ*SLLQAFLQPLQ
Trigger: CTGCAGCGGCTGCAGGAAAGCCTGCAGCAGAGAGCACTGCGCACGCGCCTGCGCCTGCAGACCATGACCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000221742.7
ENST00000430939.6
ENST00000544886.6
ENST00000594383.2
ENST00000595863.1
ENST00000596697.1
ENST00000597262.1
ENST00000598504.5
ENST00000599636.1
ENST00000600144.5
ENST00000601761.1
CDS GCA 72 bp TCAGCTGTGGGGATGGTCTCGATCCGGCCCTCCCGGTaGAGCCCCTCCTTGGAGCCCTTCCCGGGATGGATG +
Preference number: 6 (lower is better)
Translates to: SAVGMVSIRPSR*SPSLEPFPGWM
Trigger: CATCCATCCCGGGAAGGGCTCCAAGGAGGGGCTGCACCGGGAGGGCCGGATCGAGACCATCCCCACAGCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000221742.7
ENST00000544886.6
ENST00000594383.2
ENST00000596697.1
ENST00000598504.5
ENST00000600144.5
CDS GCA 72 bp AGGGAGAGGGCTCCGCTGCCCCCTTCTCCTTGCGGGTaGACCTTCCGGCCTTGGCCACTTGGCTGCTGTGTG +
Preference number: 6 (lower is better)
Translates to: RERAPLPPSPCG*TFRPWPLGCCV
Trigger: CACACAGCAGCCAAGTGGCCAAGGCCGGAAGGTGCACCCGCAAGGAGAAGGGGGCAGCGGAGCCCTCTCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS GCA 72 bp CCAGCCGCTGGCCGCTCTCCCGCAGGAACAGGCTGTTaGCATGGCTGCTCATGGTCTATCGGCGTCCGGAGC +
Preference number: 6 (lower is better)
Translates to: PAAGRSPAGTGC*HGCSWSIGVRS
Trigger: GCTCCGGACGCCGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCCAGCGGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS CCA 72 bp TTCGGCGCAGGAAGCGCAGCACGTGCTCGAGGGTCATaGTCTGCAGGCGCAGGCGCGTGCGCAGTGCTCTCT +
Preference number: 6 (lower is better)
Translates to: FGAGSAARARGS*SAGAGACAVLS
Trigger: AGAGAGCACTGCGCACGCGCCTGCGCCTGCAGACCATGACCCTCGAGCACGTGCTGCGCTTCCTGCGCCGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000221742.7
ENST00000430939.6
ENST00000544886.6
ENST00000594383.2
ENST00000595863.1
ENST00000596697.1
ENST00000597262.1
ENST00000598504.5
ENST00000599636.1
ENST00000600144.5
ENST00000601761.1
CDS CAA 72 bp CCCAGCCGCTGGCCGCTCTCCCGCAGGAACAGGCTGTaGCCATGGCTGCTCATGGTCTATCGGCGTCCGGAG +
Preference number: 6 (lower is better)
Translates to: PSRWPLSRRNRL*PWLLMVYRRPE
Trigger: CTCCGGACGCCGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCCAGCGGCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS CAA 90 bp CCCAGTAACAACAGCCAGGGAGAGGGCTCCGCTGCCCCCTTCTCCTaGCGGGTGCACCTTCCGGCCTTGGCCACTTGGCTGCTGTGTGCC +
Preference number: 6 (lower is better)
Translates to: PSNNSQGEGSAAPFS*RVHLPALATWLLCA
Trigger: GGCACACAGCAGCCAAGTGGCCAAGGCCGGAAGGTGCACCCGCAAGGAGAAGGGGGCAGCGGAGCCCTCTCCCTGGCTGTTGTTACTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS CCA 72 bp CTGCCCCCTTCTCCTTGCGGGTGCACCTTCCGGCCTTaGCCACTTGGCTGCTGTGTGCCCTTGGGCCAACTC +
Preference number: 6 (lower is better)
Translates to: LPPSPCGCTFRP*PLGCCVPLGQL
Trigger: GAGTTGGCCCAAGGGCACACAGCAGCCAAGTGGCCAAGGCCGGAAGGTGCACCCGCAAGGAGAAGGGGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS CAA 72 bp GCTGCCCCCTTCTCCTTGCGGGTGCACCTTCCGGCCTaGGCCACTTGGCTGCTGTGTGCCCTTGGGCCAACT +
Preference number: 6 (lower is better)
Translates to: AAPFSLRVHLPA*ATWLLCALGPT
Trigger: AGTTGGCCCAAGGGCACACAGCAGCCAAGTGGCCAAGGCCGGAAGGTGCACCCGCAAGGAGAAGGGGGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS CAA 90 bp CCCACCCGGCCCAGCCGCTGGCCGCTCTCCCGCAGGAACAGGCTGTaGCCATGGCTGCTCATGGTCTATCGACATGCGACAGAGTGTGAC +
Preference number: 6 (lower is better)
Translates to: PTRPSRWPLSRRNRL*PWLLMVYRHATECD
Trigger: GTCACACTCTGTCGCATGTCGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCCAGCGGCTGGGCCGGGTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430939.6
ENST00000599636.1
CDS CAA 90 bp CCCACCCGGCCCAGCCGCTGGCCGCTCTCCCGCAGGAACAGGCTGTaGCCATGGCTGCTCATGGTCTATCTGCGGGAAACAGAGAAGCCT +
Preference number: 6 (lower is better)
Translates to: PTRPSRWPLSRRNRL*PWLLMVYLRETEKP
Trigger: AGGCTTCTCTGTTTCCCGCAGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCCAGCGGCTGGGCCGGGTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596697.1
CDS GCA 72 bp AGAATGAAGGCGTTTCGGCGCAGGAAGCGCAGCACGTaGTCGAGGGTCATGGTCTGCAGGCGCAGGCGCGTG +
Preference number: 6 (lower is better)
Translates to: RMKAFRRRKRST*SRVMVCRRRRV
Trigger: CACGCGCCTGCGCCTGCAGACCATGACCCTCGAGCACGTGCTGCGCTTCCTGCGCCGAAACGCCTTCATTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000221742.7
ENST00000430939.6
ENST00000544886.6
ENST00000594383.2
ENST00000595863.1
ENST00000596697.1
ENST00000597262.1
ENST00000598504.5
ENST00000599636.1
ENST00000600144.5
ENST00000601761.1
CDS GCA 72 bp CCTTGCGGGTGCACCTTCCGGCCTTGGCCACTTGGCTaGTGTGTGCCCTTGGGCCAACTCCTCTCCCTCTCT +
Preference number: 6 (lower is better)
Translates to: PCGCTFRPWPLG*CVPLGQLLSLS
Trigger: AGAGAGGGAGAGGAGTTGGCCCAAGGGCACACAGCAGCCAAGTGGCCAAGGCCGGAAGGTGCACCCGCAAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS CAA 72 bp ACAGCTGCCCGCATCCCCATCCGCCCCGTGGCCTTGTaGTCCAGGGATGCCATACCTGTGACCAGGCTGGAG +
Preference number: 6 (lower is better)
Translates to: TAARIPIRPVAL*SRDAIPVTRLE
Trigger: CTCCAGCCTGGTCACAGGTATGGCATCCCTGGACAACAAGGCCACGGGGCGGATGGGGATGCGGGCAGCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000221742.7
ENST00000544886.6
ENST00000594383.2
ENST00000596697.1
ENST00000597262.1
ENST00000598504.5
ENST00000599636.1
ENST00000600144.5
CDS CAA 72 bp CTTCTCCTTGCGGGTGCACCTTCCGGCCTTGGCCACTaGGCTGCTGTGTGCCCTTGGGCCAACTCCTCTCCC +
Preference number: 6 (lower is better)
Translates to: LLLAGAPSGLGH*AAVCPWANSSP
Trigger: GGGAGAGGAGTTGGCCCAAGGGCACACAGCAGCCAAGTGGCCAAGGCCGGAAGGTGCACCCGCAAGGAGAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS CAA 90 bp CCCACCCGGCCCAGCCGCTGGCCGCTCTCCCGCAGGAACAGGCTGTaGCCATGGCTGCTCATGGTCTATCTGGAAAAGAACCTGGACGAG +
Preference number: 6 (lower is better)
Translates to: PTRPSRWPLSRRNRL*PWLLMVYLEKNLDE
Trigger: CTCGTCCAGGTTCTTTTCCAGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCCAGCGGCTGGGCCGGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595863.1
CDS CAA 90 bp CCCACCCGGCCCAGCCGCTGGCCGCTCTCCCGCAGGAACAGGCTGTaGCCATGGCTGCTCATGGTCTATCTGAATTCAACCAGGTCGAGC +
Preference number: 6 (lower is better)
Translates to: PTRPSRWPLSRRNRL*PWLLMVYLNSTRSS
Trigger: GCTCGACCTGGTTGAATTCAGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCCAGCGGCTGGGCCGGGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598504.5
ENST00000600144.5
ENST00000601761.1
CDS CAA 90 bp CCCACCCGGCCCAGCCGCTGGCCGCTCTCCCGCAGGAACAGGCTGTaGCCATGGCTGCTCATGGTCTATCAGAACGACCAGGAGAAAAGC +
Preference number: 6 (lower is better)
Translates to: PTRPSRWPLSRRNRL*PWLLMVYQNDQEKS
Trigger: GCTTTTCTCCTGGTCGTTCTGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCCAGCGGCTGGGCCGGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594383.2
CDS GCA 72 bp CCAGCCGCTGGCCGCTCTCCCGCAGGAACAGGCTGTTaGCATGGCTGCTCATGGTCTATCGACATGCGACAG +
Preference number: 6 (lower is better)
Translates to: PAAGRSPAGTGC*HGCSWSIDMRQ
Trigger: CTGTCGCATGTCGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCCAGCGGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430939.6
ENST00000599636.1
CDS GCA 72 bp CCAGCCGCTGGCCGCTCTCCCGCAGGAACAGGCTGTTaGCATGGCTGCTCATGGTCTATCTGCGGGAAACAG +
Preference number: 6 (lower is better)
Translates to: PAAGRSPAGTGC*HGCSWSICGKQ
Trigger: CTGTTTCCCGCAGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCCAGCGGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596697.1
CDS GCA 72 bp CCAGCCGCTGGCCGCTCTCCCGCAGGAACAGGCTGTTaGCATGGCTGCTCATGGTCTATCAGAACGACCAGG +
Preference number: 6 (lower is better)
Translates to: PAAGRSPAGTGC*HGCSWSIRTTR
Trigger: CCTGGTCGTTCTGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCCAGCGGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594383.2
CDS CCA 72 bp TTCTCCTTGCGGGTGCACCTTCCGGCCTTGGCCACTTaGCTGCTGTGTGCCCTTGGGCCAACTCCTCTCCCT +
Preference number: 6 (lower is better)
Translates to: FSLRVHLPALAT*LLCALGPTPLP
Trigger: AGGGAGAGGAGTTGGCCCAAGGGCACACAGCAGCCAAGTGGCCAAGGCCGGAAGGTGCACCCGCAAGGAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544886.6
CDS CAA 72 bp TACACAGCTGCCCGCATCCCCATCCGCCCCGTGGCCTaGTTGTCCAGGGATGCCATACCTGTGACCAGGCTG +
Preference number: 6 (lower is better)
Translates to: YTAARIPIRPVA*LSRDAIPVTRL
Trigger: CAGCCTGGTCACAGGTATGGCATCCCTGGACAACAAGGCCACGGGGCGGATGGGGATGCGGGCAGCTGTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000221742.7
ENST00000544886.6
ENST00000594383.2
ENST00000596697.1
ENST00000597262.1
ENST00000598504.5
ENST00000599636.1
ENST00000600144.5
CDS CAA 72 bp CCCAGCCGCTGGCCGCTCTCCCGCAGGAACAGGCTGTaGCCATGGCTGCTCATGGTCTATCGACATGCGACA +
Preference number: 6 (lower is better)
Translates to: PSRWPLSRRNRL*PWLLMVYRHAT
Trigger: TGTCGCATGTCGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCCAGCGGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430939.6
ENST00000599636.1
CDS CAA 72 bp CCCAGCCGCTGGCCGCTCTCCCGCAGGAACAGGCTGTaGCCATGGCTGCTCATGGTCTATCTGCGGGAAACA +
Preference number: 6 (lower is better)
Translates to: PSRWPLSRRNRL*PWLLMVYLRET
Trigger: TGTTTCCCGCAGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCCAGCGGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596697.1
CDS CAA 72 bp CCCAGCCGCTGGCCGCTCTCCCGCAGGAACAGGCTGTaGCCATGGCTGCTCATGGTCTATCAGAACGACCAG +
Preference number: 6 (lower is better)
Translates to: PSRWPLSRRNRL*PWLLMVYQNDQ
Trigger: CTGGTCGTTCTGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCCAGCGGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594383.2
CDS GCA 72 bp GACCGCGATGATGGTGGTCACCATGTAGTACACAGCTaGCCGCATCCCCATCCGCCCCGTGGCCTTGTTGTC +
Preference number: 6 (lower is better)
Translates to: DRDDGGHHVVHS*PHPHPPRGLVV
Trigger: GACAACAAGGCCACGGGGCGGATGGGGATGCGGGCAGCTGTGTACTACATGGTGACCACCATCATCGCGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000221742.7
ENST00000544886.6
ENST00000594383.2
ENST00000596697.1
ENST00000597262.1
ENST00000598504.5
ENST00000600144.5
CDS CAA 90 bp CCAAAGGCCACAGAGAAGACCACGAGGCCCAGGGCGTTGATGCCATaGGCGGAGCCAGGCACGGGTACAGTCTCCTCAAAGCTCAGCATC +
Preference number: 6 (lower is better)
Translates to: PKATEKTTRPRALMP*AEPGTGTVSSKLSI
Trigger: GATGCTGAGCTTTGAGGAGACTGTACCCGTGCCTGGCTCCGCCAATGGCATCAACGCCCTGGGCCTCGTGGTCTTCTCTGTGGCCTTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221742.7
ENST00000430939.6
ENST00000544886.6
ENST00000594383.2
ENST00000598504.5
ENST00000600144.5
CDS GCA 72 bp GGCCGCTCTCCCGCAGGAACAGGCTGTTGCCATGGCTaGTCATGGTCTATCGACATGCGACAGAGTGTGACC +
Preference number: 6 (lower is better)
Translates to: GRSPAGTGCCHG*SWSIDMRQSVT
Trigger: GGTCACACTCTGTCGCATGTCGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430939.6
ENST00000599636.1
CDS GCA 72 bp CCAGCCGCTGGCCGCTCTCCCGCAGGAACAGGCTGTTaGCATGGCTGCTCATGGTCTATCTGGAAAAGAACC +
Preference number: 6 (lower is better)
Translates to: PAAGRSPAGTGC*HGCSWSIWKRT
Trigger: GGTTCTTTTCCAGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCCAGCGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595863.1
CDS GCA 72 bp GGCCGCTCTCCCGCAGGAACAGGCTGTTGCCATGGCTaGTCATGGTCTATCTGCGGGAAACAGAGAAGCCTG +
Preference number: 6 (lower is better)
Translates to: GRSPAGTGCCHG*SWSICGKQRSL
Trigger: CAGGCTTCTCTGTTTCCCGCAGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596697.1
CDS CCA 72 bp CGCTGGCCGCTCTCCCGCAGGAACAGGCTGTTGCCATaGCTGCTCATGGTCTATCGACATGCGACAGAGTGT +
Preference number: 6 (lower is better)
Translates to: RWPLSRRNRLLP*LLMVYRHATEC
Trigger: ACACTCTGTCGCATGTCGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430939.6
ENST00000599636.1
CDS CCA 72 bp CTGGACGAGCTGCTCGCCACGCACAAGAACCTCAGCTaGGGCCTCAACTGCAAGAACATCGGGCATGAGGTG +
Preference number: 6 (lower is better)
Translates to: LDELLATHKNLS*GLNCKNIGHEV
Trigger: CACCTCATGCCCGATGTTCTTGCAGTTGAGGCCCCAGCTGAGGTTCTTGTGCGTGGCGAGCAGCTCGTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595863.1
CDS CCA 72 bp CGCTGGCCGCTCTCCCGCAGGAACAGGCTGTTGCCATaGCTGCTCATGGTCTATCTGCGGGAAACAGAGAAG +
Preference number: 6 (lower is better)
Translates to: RWPLSRRNRLLP*LLMVYLRETEK
Trigger: CTTCTCTGTTTCCCGCAGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596697.1
CDS CAA 72 bp ACAGAGAAGACCACGAGGCCCAGGGCGTTGATGCCATaGGCGGAGCCAGGCACGGGTACAGTCTCCTCAAAG +
Preference number: 6 (lower is better)
Translates to: TEKTTRPRALMP*AEPGTGTVSSK
Trigger: CTTTGAGGAGACTGTACCCGTGCCTGGCTCCGCCAATGGCATCAACGCCCTGGGCCTCGTGGTCTTCTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221742.7
ENST00000430939.6
ENST00000544886.6
ENST00000594383.2
ENST00000598504.5
ENST00000600144.5
CDS CAA 72 bp CCCAGCCGCTGGCCGCTCTCCCGCAGGAACAGGCTGTaGCCATGGCTGCTCATGGTCTATCTGGAAAAGAAC +
Preference number: 6 (lower is better)
Translates to: PSRWPLSRRNRL*PWLLMVYLEKN
Trigger: GTTCTTTTCCAGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCCAGCGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595863.1
CDS CAA 72 bp CCCAGCCGCTGGCCGCTCTCCCGCAGGAACAGGCTGTaGCCATGGCTGCTCATGGTCTATCTGAATTCAACC +
Preference number: 6 (lower is better)
Translates to: PSRWPLSRRNRL*PWLLMVYLNST
Trigger: GGTTGAATTCAGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCCAGCGGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598504.5
ENST00000600144.5
ENST00000601761.1
CDS TCA 72 bp CCGCTGAGACAAGTGCTCGATGACGGCCGCTCCAATTaGGTCCCCCAGTACGTTGGTCATTGTGCGAAGCCG +
Preference number: 6 (lower is better)
Translates to: PLRQVLDDGRSN*VPQYVGHCAKP
Trigger: CGGCTTCGCACAATGACCAACGTACTGGGGGACTCAATTGGAGCGGCCGTCATCGAGCACTTGTCTCAGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221742.7
ENST00000430939.6
ENST00000594383.2
ENST00000600144.5
CDS GCA 72 bp GGCCGCTCTCCCGCAGGAACAGGCTGTTGCCATGGCTaGTCATGGTCTATCTGGAAAAGAACCTGGACGAGC +
Preference number: 6 (lower is better)
Translates to: GRSPAGTGCCHG*SWSIWKRTWTS
Trigger: GCTCGTCCAGGTTCTTTTCCAGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595863.1
CDS GCA 72 bp GGCCGCTCTCCCGCAGGAACAGGCTGTTGCCATGGCTaGTCATGGTCTATCAGAACGACCAGGAGAAAAGCG +
Preference number: 6 (lower is better)
Translates to: GRSPAGTGCCHG*SWSIRTTRRKA
Trigger: CGCTTTTCTCCTGGTCGTTCTGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594383.2
CDS CCA 72 bp AGCTGGTTCCGTTCTCCACTGAGAATGGAGGAGGCATaGAGGCACCCGGCTCAGACCCGTTCTCTGTCCTCA +
Preference number: 6 (lower is better)
Translates to: SWFRSPLRMEEA*RHPAQTRSLSS
Trigger: TGAGGACAGAGAACGGGTCTGAGCCGGGTGCCTCCATGCCTCCTCCATTCTCAGTGGAGAACGGAACCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221742.7
ENST00000430939.6
ENST00000544886.6
ENST00000594383.2
ENST00000598504.5
ENST00000600144.5
CDS CCA 72 bp CGCTGGCCGCTCTCCCGCAGGAACAGGCTGTTGCCATaGCTGCTCATGGTCTATCTGGAAAAGAACCTGGAC +
Preference number: 6 (lower is better)
Translates to: RWPLSRRNRLLP*LLMVYLEKNLD
Trigger: GTCCAGGTTCTTTTCCAGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595863.1
CDS CCA 72 bp TCTCCCGCAGGAACAGGCTGTTGCCATGGCTGCTCATaGTCTATCTGCGGGAAACAGAGAAGCCTGGGGCTG +
Preference number: 6 (lower is better)
Translates to: SPAGTGCCHGCS*SICGKQRSLGL
Trigger: CAGCCCCAGGCTTCTCTGTTTCCCGCAGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596697.1
CDS CCA 72 bp CGCTGGCCGCTCTCCCGCAGGAACAGGCTGTTGCCATaGCTGCTCATGGTCTATCTGAATTCAACCAGGTCG +
Preference number: 6 (lower is better)
Translates to: RWPLSRRNRLLP*LLMVYLNSTRS
Trigger: CGACCTGGTTGAATTCAGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598504.5
ENST00000600144.5
ENST00000601761.1
CDS CCA 72 bp CGCTGGCCGCTCTCCCGCAGGAACAGGCTGTTGCCATaGCTGCTCATGGTCTATCAGAACGACCAGGAGAAA +
Preference number: 6 (lower is better)
Translates to: RWPLSRRNRLLP*LLMVYQNDQEK
Trigger: TTTCTCCTGGTCGTTCTGATAGACCATGAGCAGCCATGGCAACAGCCTGTTCCTGCGGGAGAGCGGCCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594383.2
CDS CAA 72 bp CGGCCGCTCCAATTGAGTCCCCCAGTACGTTGGTCATaGTGCGAAGCCGGTCAAGGAACCAGTCCACGGCAA +
Preference number: 6 (lower is better)
Translates to: RPLQLSPPVRWS*CEAGQGTSPRQ
Trigger: TTGCCGTGGACTGGTTCCTTGACCGGCTTCGCACAATGACCAACGTACTGGGGGACTCAATTGGAGCGGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221742.7
ENST00000430939.6
ENST00000594383.2
ENST00000600144.5
CDS CAA 90 bp GACAAGTGCTCGATGACGGCCGCTCCAATTGAGTCCCCCAGTACGTaGGTCATTGTGCGAAGCCGGTCAAGGAACCAGTCCACGGCAATG +
Preference number: 6 (lower is better)
Translates to: DKCSMTAAPIESPST*VIVRSRSRNQSTAM
Trigger: CATTGCCGTGGACTGGTTCCTTGACCGGCTTCGCACAATGACCAACGTACTGGGGGACTCAATTGGAGCGGCCGTCATCGAGCACTTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221742.7
ENST00000430939.6
ENST00000594383.2
ENST00000600144.5
CDS GCA 72 bp GGCACGGGTACAGTCTCCTCAAAGCTCAGCATCTCCTaGAGGGTACCCAAGGCCCGAGTGACATTTTCCAGG +
Preference number: 6 (lower is better)
Translates to: GTGTVSSKLSIS*RVPKARVTFSR
Trigger: CCTGGAAAATGTCACTCGGGCCTTGGGTACCCTGCAGGAGATGCTGAGCTTTGAGGAGACTGTACCCGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221742.7
ENST00000430939.6
ENST00000544886.6
ENST00000594383.2
ENST00000598504.5
ENST00000600144.5
CDS GCA 72 bp AGCAGGTGCCCAGTAAATGCAGCTATTCTGCCTGAATaGCCAGGTGAGCAACAGGGAGAGCGGGGAGTCAGG +
Preference number: 6 (lower is better)
Translates to: SRCPVNAAILPE*PGEQQGERGVR
Trigger: CCTGACTCCCCGCTCTCCCTGTTGCTCACCTGGGCATTCAGGCAGAATAGCTGCATTTACTGGGCACCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596697.1
CDS CAA 72 bp TCGATGACGGCCGCTCCAATTGAGTCCCCCAGTACGTaGGTCATTGTGCGAAGCCGGTCAAGGAACCAGTCC +
Preference number: 6 (lower is better)
Translates to: SMTAAPIESPST*VIVRSRSRNQS
Trigger: GGACTGGTTCCTTGACCGGCTTCGCACAATGACCAACGTACTGGGGGACTCAATTGGAGCGGCCGTCATCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221742.7
ENST00000430939.6
ENST00000594383.2
ENST00000600144.5
CDS GCA 72 bp TGCTCATGGTCTATCTGGAAAAGAACCTGGACGAGCTaGTCGCCACGCACAAGAACCTCAGCTGGGGCCTCA +
Preference number: 6 (lower is better)
Translates to: CSWSIWKRTWTS*SPRTRTSAGAS
Trigger: TGAGGCCCCAGCTGAGGTTCTTGTGCGTGGCGAGCAGCTCGTCCAGGTTCTTTTCCAGATAGACCATGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595863.1
CDS TCA 72 bp TTGACACACCCTGACTCCAGCCCACTCTTATTTCACTaGGATCATCACAAGCCTCTGGGGGCTGCCCCAGTG +
Preference number: 6 (lower is better)
Translates to: LTHPDSSPLLFH*DHHKPLGAAPV
Trigger: CACTGGGGCAGCCCCCAGAGGCTTGTGATGATCTCAGTGAAATAAGAGTGGGCTGGAGTCAGGGTGTGTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596697.1
CDS GCA 72 bp ACCTCTAGACACTTAGATCTGATGAGATGTGTGGGCTaGTTCTCGGAGCCTCTTACATCCCGGCGTCCGGAG +
Preference number: 6 (lower is better)
Translates to: TSRHLDLMRCVG*FSEPLTSRRPE
Trigger: CTCCGGACGCCGGGATGTAAGAGGCTCCGAGAAGCAGCCCACACATCTCATCAGATCTAAGTGTCTAGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS CAA 72 bp TTGAGGCTGTCGAAGAAGTCCCTGAGGACTCTGCCCTaGTGTTTCATGCCACCAATGACCAGCCCAAAGGCC +
Preference number: 6 (lower is better)
Translates to: LRLSKKSLRTLP*CFMPPMTSPKA
Trigger: GGCCTTTGGGCTGGTCATTGGTGGCATGAAACACAAGGGCAGAGTCCTCAGGGACTTCTTCGACAGCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221742.7
ENST00000430939.6
ENST00000544886.6
ENST00000594383.2
ENST00000598504.5
ENST00000600144.5
CDS GCA 72 bp AAATACATCCTTTCTCCTAGACTCCTCAAGAACCCCTaGCCATTGCTCTGTCAGGCCCTTCCTCCCGCCTCT +
Preference number: 6 (lower is better)
Translates to: KYILSPRLLKNP*PLLCQALPPAS
Trigger: AGAGGCGGGAGGAAGGGCCTGACAGAGCAATGGGCAGGGGTTCTTGAGGAGTCTAGGAGAAAGGATGTATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596697.1
CDS CAA 90 bp ATAGCCTCATTGAGGCTGTCGAAGAAGTCCCTGAGGACTCTGCCCTaGTGTTTCATGCCACCAATGACCAGCCCAAAGGCCACAGAGAAG +
Preference number: 6 (lower is better)
Translates to: IASLRLSKKSLRTLP*CFMPPMTSPKATEK
Trigger: CTTCTCTGTGGCCTTTGGGCTGGTCATTGGTGGCATGAAACACAAGGGCAGAGTCCTCAGGGACTTCTTCGACAGCCTCAATGAGGCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221742.7
ENST00000430939.6
ENST00000544886.6
ENST00000594383.2
ENST00000598504.5
ENST00000600144.5
CDS CAA 90 bp AGCTGGAAGCGCTTAGGACATCCTAAAGCTGGAAGAAGGGCCATGTaGCTGGAAGCAACGGCGAGAAGGATGCTAGATGGGCTCTTTCTC +
Preference number: 6 (lower is better)
Translates to: SWKRLGHPKAGRRAM*LEATARRMLDGLFL
Trigger: GAGAAAGAGCCCATCTAGCATCCTTCTCGCCGTTGCTTCCAGCAACATGGCCCTTCTTCCAGCTTTAGGATGTCCTAAGCGCTTCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430939.6
ENST00000599636.1
CDS TCA 72 bp TGCCCCAGTGGCTCAAGGGAAATTAACAAGCCTTTGTaGAGTGCCAGCTGCATACGGAGCCCTAGACAAAGC +
Preference number: 6 (lower is better)
Translates to: CPSGSREINKPL*SASCIRSPRQS
Trigger: GCTTTGTCTAGGGCTCCGTATGCAGCTGGCACTTCACAAAGGCTTGTTAATTTCCCTTGAGCCACTGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596697.1
CDS TCA 72 bp TTCAGCCCCAAGCTCCCACCACCCTCCGAATCTCCTTaGTCAAACTGTGTACTTCCCCCTGACCTGTTTGAA +
Preference number: 6 (lower is better)
Translates to: FSPKLPPPSESP*SNCVLPPDLFE
Trigger: TTCAAACAGGTCAGGGGGAAGTACACAGTTTGATCAAGGAGATTCGGAGGGTGGTGGGAGCTTGGGGCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596697.1
CDS GCA 72 bp CCTCAACTCCCCACCATATCCAAGGGATGGGAAATCTaGCCTGATTTTCCAGATCCTGCGTCCTCTAGAGCT +
Preference number: 6 (lower is better)
Translates to: PQLPTISKGWEI*PDFPDPASSRA
Trigger: AGCTCTAGAGGACGCAGGATCTGGAAAATCAGGGCAGATTTCCCATCCCTTGGATATGGTGGGGAGTTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000598504.5
ENST00000600144.5
ENST00000601761.1
CDS GCA 72 bp TTACCAGTACGTAGGTCCCTGGCCTTTGTGTTTTGCTaGCACTGGCTTTTCTGGGATCTTCCTTGCCCTCCT +
Preference number: 6 (lower is better)
Translates to: LPVRRSLAFVFC*HWLFWDLPCPP
Trigger: AGGAGGGCAAGGAAGATCCCAGAAAAGCCAGTGGCAGCAAAACACAAAGGCCAGGGACCTACGTACTGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000598504.5
ENST00000600144.5
ENST00000601761.1
CDS GCA 72 bp TCCTGCTCCAAATGGACCCATCTCCTGAAACCACAATaGTGCTTCTCCTTGCACTGCACTCCAACTTGGGTG +
Preference number: 6 (lower is better)
Translates to: SCSKWTHLLKPQ*CFSLHCTPTWV
Trigger: CACCCAAGTTGGAGTGCAGTGCAAGGAGAAGCAGCATTGTGGTTTCAGGAGATGGGTCCATTTGGAGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601761.1
CDS CCA 72 bp GTCTATCGACATGCGACAGAGTGTGACCTGGACAGCTaGAAGCGCTTAGGACATCCTAAAGCTGGAAGAAGG +
Preference number: 6 (lower is better)
Translates to: VYRHATECDLDS*KRLGHPKAGRR
Trigger: CCTTCTTCCAGCTTTAGGATGTCCTAAGCGCTTCCAGCTGTCCAGGTCACACTCTGTCGCATGTCGATAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430939.6
ENST00000599636.1
CDS CAA 72 bp AGCACCCGGAGGCTAGTCCCCCAAATTAGGACGGTTTaGTGTCCAGCCTGGAGGCTTTTCACAAGGACAAAA +
Preference number: 6 (lower is better)
Translates to: STRRLVPQIRTV*CPAWRLFTRTK
Trigger: TTTTGTCCTTGTGAAAAGCCTCCAGGCTGGACACAAAACCGTCCTAATTTGGGGGACTAGCCTCCGGGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596697.1
CDS CAA 90 bp TCTCCTGAAACCACAATGCTGCTTCTCCTTGCACTGCACTCCAACTaGGGTGACAGCGTAAAACCCTGTCTCTTGGGTTTCCTGCTCAGA +
Preference number: 6 (lower is better)
Translates to: SPETTMLLLLALHSN*GDSVKPCLLGFLLR
Trigger: TCTGAGCAGGAAACCCAAGAGACAGGGTTTTACGCTGTCACCCAAGTTGGAGTGCAGTGCAAGGAGAAGCAGCATTGTGGTTTCAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601761.1
CDS TCA 72 bp AGCGGGGAGTCAGGAGAGCGGGGAGTCCCTTGGGAATaGAATGATAATGATTCTTGGCCACAGTGTGATGTT +
Preference number: 6 (lower is better)
Translates to: SGESGERGVPWE*NDNDSWPQCDV
Trigger: AACATCACACTGTGGCCAAGAATCATTATCATTTCATTCCCAAGGGACTCCCCGCTCTCCTGACTCCCCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596697.1
CDS TCA 72 bp AATGCTGCTTCTCCTTGCACTGCACTCCAACTTGGGTaGCAGCGTAAAACCCTGTCTCTTGGGTTTCCTGCT +
Preference number: 6 (lower is better)
Translates to: NAASPCTALQLG*QRKTLSLGFPA
Trigger: AGCAGGAAACCCAAGAGACAGGGTTTTACGCTGTCACCCAAGTTGGAGTGCAGTGCAAGGAGAAGCAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601761.1
CDS GCA 72 bp AAGGACAAAATCAGCAGGTGCCTGGCAAACAGCAGGTaGCCAGTAAATGCAGCTATTCTGCCTGAATGCCCA +
Preference number: 6 (lower is better)
Translates to: KDKISRCLANSR*PVNAAILPECP
Trigger: TGGGCATTCAGGCAGAATAGCTGCATTTACTGGGCACCTGCTGTTTGCCAGGCACCTGCTGATTTTGTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596697.1
CDS GCA 72 bp GATCCTGCGTCCTCTAGAGCTAATCCAAATTCCCAATaGCAAGCCCCACTTAGGATCCTGCTCCAAATGGAC +
Preference number: 6 (lower is better)
Translates to: DPASSRANPNSQ*QAPLRILLQMD
Trigger: GTCCATTTGGAGCAGGATCCTAAGTGGGGCTTGGCATTGGGAATTTGGATTAGCTCTAGAGGACGCAGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598504.5
ENST00000600144.5
ENST00000601761.1
CDS GCA 72 bp TGCTCCAAATGGACCCATCTCCTGAAACCACAATGCTaGTTCTCCTTGCACTGCACTCCAACTTGGGTGACA +
Preference number: 6 (lower is better)
Translates to: CSKWTHLLKPQC*FSLHCTPTWVT
Trigger: TGTCACCCAAGTTGGAGTGCAGTGCAAGGAGAAGCAGCATTGTGGTTTCAGGAGATGGGTCCATTTGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601761.1
CDS CCA 72 bp CCCCCTGACCTGTTTGAAGCAGGCCTCCACAAGGTTTaGTGGAAACATATTTCTGATCAGGTCCATGAAGGC +
Preference number: 6 (lower is better)
Translates to: PPDLFEAGLHKV*WKHISDQVHEG
Trigger: GCCTTCATGGACCTGATCAGAAATATGTTTCCACCAAACCTTGTGGAGGCCTGCTTCAAACAGGTCAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596697.1
CDS CAA 72 bp ACCACAATGCTGCTTCTCCTTGCACTGCACTCCAACTaGGGTGACAGCGTAAAACCCTGTCTCTTGGGTTTC +
Preference number: 6 (lower is better)
Translates to: TTMLLLLALHSN*GDSVKPCLLGF
Trigger: GAAACCCAAGAGACAGGGTTTTACGCTGTCACCCAAGTTGGAGTGCAGTGCAAGGAGAAGCAGCATTGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601761.1
CDS GCA 72 bp CTTATTTCACTGAGATCATCACAAGCCTCTGGGGGCTaGCCCAGTGGCTCAAGGGAAATTAACAAGCCTTTG +
Preference number: 6 (lower is better)
Translates to: LISLRSSQASGG*PSGSREINKPL
Trigger: CAAAGGCTTGTTAATTTCCCTTGAGCCACTGGGGCAGCCCCCAGAGGCTTGTGATGATCTCAGTGAAATAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596697.1
CDS GCA 72 bp ATCCAAATTCCCAATGCCAAGCCCCACTTAGGATCCTaGTCCAAATGGACCCATCTCCTGAAACCACAATGC +
Preference number: 6 (lower is better)
Translates to: IQIPNAKPHLGS*SKWTHLLKPQC
Trigger: GCATTGTGGTTTCAGGAGATGGGTCCATTTGGAGCAGGATCCTAAGTGGGGCTTGGCATTGGGAATTTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598504.5
ENST00000600144.5
ENST00000601761.1
CDS CCA 72 bp CTATCTGAATTCAACCAGGTCGAGCTGCAGGTTTCTTaGAGGTCTCAGTTTTACCAGTACGTAGGTCCCTGG +
Preference number: 6 (lower is better)
Translates to: LSEFNQVELQVS*RSQFYQYVGPW
Trigger: CCAGGGACCTACGTACTGGTAAAACTGAGACCTCCAAGAAACCTGCAGCTCGACCTGGTTGAATTCAGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598504.5
ENST00000600144.5
ENST00000601761.1
CDS GCA 72 bp CTGCTCATGGTCTATCTGAATTCAACCAGGTCGAGCTaGAGGTTTCTTGGAGGTCTCAGTTTTACCAGTACG +
Preference number: 6 (lower is better)
Translates to: LLMVYLNSTRSS*RFLGGLSFTST
Trigger: CGTACTGGTAAAACTGAGACCTCCAAGAAACCTGCAGCTCGACCTGGTTGAATTCAGATAGACCATGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598504.5
ENST00000600144.5
ENST00000601761.1
CDS CCA 72 bp CCTGACCTGTTTGAAGCAGGCCTCCACAAGGTTTGGTaGAAACATATTTCTGATCAGGTCCATGAAGGCATC +
Preference number: 6 (lower is better)
Translates to: PDLFEAGLHKVW*KHISDQVHEGI
Trigger: GATGCCTTCATGGACCTGATCAGAAATATGTTTCCACCAAACCTTGTGGAGGCCTGCTTCAAACAGGTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596697.1
CDS CCA 72 bp CAAAGAGTGAACCACAGACTACACAGGGAATCCCTCTaGGATATTATGTTTCCAGTCCCTAAGCCACAGCAG +
Preference number: 6 (lower is better)
Translates to: QRVNHRLHRESL*DIMFPVPKPQQ
Trigger: CTGCTGTGGCTTAGGGACTGGAAACATAATATCCCAGAGGGATTCCCTGTGTAGTCTGTGGTTCACTCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS CAA 72 bp CTCCTTGATCAAACTGTGTACTTCCCCCTGACCTGTTaGAAGCAGGCCTCCACAAGGTTTGGTGGAAACATA +
Preference number: 6 (lower is better)
Translates to: LLDQTVYFPLTC*KQASTRFGGNI
Trigger: TATGTTTCCACCAAACCTTGTGGAGGCCTGCTTCAAACAGGTCAGGGGGAAGTACACAGTTTGATCAAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596697.1
CDS CAA 90 bp CCTCCGAATCTCCTTGATCAAACTGTGTACTTCCCCCTGACCTGTTaGAAGCAGGCCTCCACAAGGTTTGGTGGAAACATATTTCTGATC +
Preference number: 6 (lower is better)
Translates to: PPNLLDQTVYFPLTC*KQASTRFGGNIFLI
Trigger: GATCAGAAATATGTTTCCACCAAACCTTGTGGAGGCCTGCTTCAAACAGGTCAGGGGGAAGTACACAGTTTGATCAAGGAGATTCGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596697.1
CDS TCA 72 bp ACCTATTGTCTACAGCTGCTTTCAAGCTACAATGCCTaGGTTGAGTTGTTGGGACAGAGATTGTACGGGCCA +
Preference number: 6 (lower is better)
Translates to: TYCLQLLSSYNA*VELLGQRLYGP
Trigger: TGGCCCGTACAATCTCTGTCCCAACAACTCAACTCAGGCATTGTAGCTTGAAAGCAGCTGTAGACAATAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS CCA 72 bp CGTCTTGAACTGTTTGAAGCAGGCCTCCACAAGGTTTaGTGGAAACATATTTCTGATCAGGTCCATGAAGGC +
Preference number: 6 (lower is better)
Translates to: RLELFEAGLHKV*WKHISDQVHEG
Trigger: GCCTTCATGGACCTGATCAGAAATATGTTTCCACCAAACCTTGTGGAGGCCTGCTTCAAACAGTTCAAGACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000221742.7
ENST00000544886.6
ENST00000594383.2
ENST00000598504.5
ENST00000600144.5
CDS CCA 72 bp CTTGAACTGTTTGAAGCAGGCCTCCACAAGGTTTGGTaGAAACATATTTCTGATCAGGTCCATGAAGGCATC +
Preference number: 6 (lower is better)
Translates to: LELFEAGLHKVW*KHISDQVHEGI
Trigger: GATGCCTTCATGGACCTGATCAGAAATATGTTTCCACCAAACCTTGTGGAGGCCTGCTTCAAACAGTTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000221742.7
ENST00000544886.6
ENST00000594383.2
ENST00000598504.5
ENST00000600144.5
CDS TCA 72 bp GGAAGAGGAGGAAACCACAAAAATAATGGACCTTTTTaGCACACCCTGACTCCAGCCCACTCTTATTTCACT +
Preference number: 6 (lower is better)
Translates to: GRGGNHKNNGPF*HTLTPAHSYFT
Trigger: AGTGAAATAAGAGTGGGCTGGAGTCAGGGTGTGTCAAAAAGGTCCATTATTTTTGTGGTTTCCTCCTCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000596697.1
CDS CAA 90 bp GTTTTGTCCGGTTCCTTTCTCTTCCTTACAAGACATAATACGGTATaGACAAACTATGGTCTGCTAGTCAAATTCAGCCTACTGCTTGTT +
Preference number: 6 (lower is better)
Translates to: VLSGSFLFLTRHNTV*TNYGLLVKFSLLLV
Trigger: AACAAGCAGTAGGCTGAATTTGACTAGCAGACCATAGTTTGTCAATACCGTATTATGTCTTGTAAGGAAGAGAAAGGAACCGGACAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598504.5
CDS CAA 72 bp GGTTCCTTTCTCTTCCTTACAAGACATAATACGGTATaGACAAACTATGGTCTGCTAGTCAAATTCAGCCTA +
Preference number: 6 (lower is better)
Translates to: GSFLFLTRHNTV*TNYGLLVKFSL
Trigger: TAGGCTGAATTTGACTAGCAGACCATAGTTTGTCAATACCGTATTATGTCTTGTAAGGAAGAGAAAGGAACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598504.5