RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC1A5 (Homo sapiens)

Ensembl gene IDs: ENSG00000105281

Ensembl transcript IDs: ENST00000412532.6, ENST00000434726.6, ENST00000542575.6, ENST00000593713.1, ENST00000594991.5

Found 303 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACTGGCTCCCCAGAGTGTaGAGGCAGACCCCCAGAGCC +
Preference number: 2 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHWLPRV*RQTPRA
Trigger: GGCTCTGGGGGTCTGCCTGCACACTCTGGGGAGCCA...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
3UTR-3UTR GCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACTGGCTCCCCAGAGTGTaGAGGCAGACCCCCAGAGCC +
Preference number: 2 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHWLPRV*RQTPRA
Trigger: GGCTCTGGGGGTCTGCCTGCACACTCTGGGGAGCCA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
3UTR-3UTR CCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACCCAGGCAGGTCACGGTaGGGACGCAGCAGAACATTA +
Preference number: 2 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHPGRSR*GRSRTL
Trigger: TAATGTTCTGCTGCGTCCCCACCGTGACCTGCCTGG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
3UTR-3UTR TCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACCTTGAGTTGGGGACATaGGTGAGAACTGGGGGTTTT +
Preference number: 2 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHLELGT*VRTGGF
Trigger: AAAACCCCCAGTTCTCACTCATGTCCCCAACTCAAG...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
3UTR-3UTR TCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACGAGAACTGGGGGTTTTaGGGAGTAACCCTTGTGAAC +
Preference number: 2 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHENWGF*GVTLVN
Trigger: GTTCACAAGGGTTACTCCTCAAAACCCCCAGTTCTC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
3UTR-3UTR TCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACCTTGAGTTGGGGACATaGGTGAGAACTGGGGGTTTT +
Preference number: 2 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHLELGT*VRTGGF
Trigger: AAAACCCCCAGTTCTCACTCATGTCCCCAACTCAAG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR TCA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGCTCCCACGGAGGCGTTaGTGGCGGCGGAGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKLPRRR*WRRRRR
Trigger: GCGCCGCCTCCGCCGCCATCAACGCCTCCGTGGGAG...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR GCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACGGTGGGCTCCGCCGCTaGGAGCCCCTTGGAGTCTCG +
Preference number: 4 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHGGLRR*EPLGVS
Trigger: CGAGACTCCAAGGGGCTCGCAGCGGCGGAGCCCACC...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR CCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACTCTCAGAGGCGACCGTaGCATCCCCTGCGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHSQRRP*HPLRAP
Trigger: GGGGGCCCGCAGGGGATGCCACGGTCGCCTCTGAGA...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR TCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACCCCCAGGCTGGGCGCTaGGGCTTCTCTGCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHPQAGR*GFSALP
Trigger: GGGCAGAGCAGAGAAGCCTCAGCGCCCAGCCTGGGG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR GCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACAGCAGGGATGCCCGCTaGCCCCACGCTGGACGCTGT +
Preference number: 4 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHSRDAR*PHAGRC
Trigger: ACAGCGTCCAGCGTGGGGGCAGCGGGCATCCCTGCT...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR GCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACCACCTCCAGCAGGGATaGCCGCTGCCCCCACGCTGG +
Preference number: 4 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHHLQQG*PLPPRW
Trigger: CCAGCGTGGGGGCAGCGGGCATCCCTGCTGGAGGTG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR GCA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGCACCTCCAGCAGGGATaGCCGCTGCCCCCACGCTGG +
Preference number: 4 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKHLQQG*PLPPRW
Trigger: CCAGCGTGGGGGCAGCGGGCATCCCTGCTGGAGGTG...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACTGCGGCCACGCACTaGAAGAGCGCGGCACCGTCC +
Preference number: 4 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHTAATH*KSAAPS
Trigger: GGACGGTGCCGCGCTCTTCCAGTGCGTGGCCGCAGT...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACCGCCTTGGTCCTCGATaGAGGCCAGCGCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHRLGPR*RPAPGP
Trigger: GGGGCCTGGCGCTGGCCTCCATCGAGGACCAAGGCG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR GCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACATCCCCTCCACCTCCTaGCCCACGGGCACCTTCACC +
Preference number: 4 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHIPSTS*PTGTFT
Trigger: GGTGAAGGTGCCCGTGGGGCAGGAGGTGGAGGGGAT...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR GCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACGCAGTAGCCGCCTGCTaGCGCGCCTTGGTCCTCGAT +
Preference number: 4 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHAVAAC*RALVLD
Trigger: ATCGAGGACCAAGGCGCGGCAGCAGGCGGCTACTGC...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR GCA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGACCGCAGTAGCCGCCTaGTGCCGCGCCTTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKTAVAA*CRALVL
Trigger: GAGGACCAAGGCGCGGCAGCAGGCGGCTACTGCGGT...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR GCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACGGGCATTTTCGGCACTaGCCGCGGCTCCCACGGAGG +
Preference number: 4 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHGHFRH*PRLPRR
Trigger: CCTCCGTGGGAGCCGCGGGCAGTGCCGAAAATGCCC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR CCA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGGGGACCCGGGCTGCCTaGGTCTTGGACACTGAGGGC +
Preference number: 4 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKGTRAA*VLDTEG
Trigger: GCCCTCAGTGTCCAAGACCCAGGCAGCCCGGGTCCC...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR CCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACTCTCTGGGTGGGACGTaGGGCCCTTGGCTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHSLGGT*GPWLQE
Trigger: CTCCTGGAGCCAAGGGCCCCACGTCCCACCCAGAGA...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR CCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACCTGGCTGGGAGCGCTTaGGCTCCTTCCCAGGACCCG +
Preference number: 4 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHLAGSA*APSQDP
Trigger: CGGGTCCTGGGAAGGAGCCCAAGCGCTCCCAGCCAG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR CCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACCCGCTGCGAGCCCCTTaGAGTCTCGAGGAGGATCGG +
Preference number: 4 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHPLRAP*SLEEDR
Trigger: CCGATCCTCCTCGAGACTCCAAGGGGCTCGCAGCGG...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR CCA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGCCTGCTGCCGCGCCTTaGTCCTCGATGGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKPAAAP*SSMEAS
Trigger: GCTGGCCTCCATCGAGGACCAAGGCGCGGCAGCAGG...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR CCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACCGGGGTGAGGAATGCTaGCCTCCCACGGCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHRGEEC*PPTAGQ
Trigger: CTGGCCTGCCGTGGGAGGCCAGCATTCCTCACCCCG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594991.5
CDS-3UTR TCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACAGCCCATGGATGGCGTaGCCCAGCAGGCAGCACAGA +
Preference number: 4 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHSPWMA*PSRQHR
Trigger: TCTGTGCTGCCTGCTGGGTCACGCCATCCATGGGCT...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR GCA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGATCCCCTCCACCTCCTaGCCCACGGGCACCTTCACC +
Preference number: 4 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKIPSTS*PTGTFT
Trigger: GGTGAAGGTGCCCGTGGGGCAGGAGGTGGAGGGGAT...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR GCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACATCCCCTCCACCTCCTaGCCCACGGGCACCTTCACC +
Preference number: 4 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHIPSTS*PTGTFT
Trigger: GGTGAAGGTGCCCGTGGGGCAGGAGGTGGAGGGGAT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR GCA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGCCAGCGGCGTCACGATaGCCCACAGGAAGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKPAASR*PTGSGR
Trigger: CCTACCGCTTCCTGTGGGGCATCGTGACGCCGCTGG...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR GCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCACACCTCCAGCAGGGATaGCCGCTGCCCCCACGCTGG +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRAHLQQG*PLPPRW
Trigger: CCAGCGTGGGGGCAGCGGGCATCCCTGCTGGAGGTG...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR GCA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGTGGCTCCCCAGAGTGTaGAGGCAGACCCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKWLPRV*RQTPRA
Trigger: GGCTCTGGGGGTCTGCCTGCACACTCTGGGGAGCCA...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACTTCCTCAGTGGGGACTaGCAGCGGATCCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHFLSGD*QRIQGQ
Trigger: CTGCCCCTGGATCCGCTGCCAGTCCCCACTGAGGAA...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCATCTCAGAGGCGACCGTaGCATCCCCTGCGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRASQRRP*HPLRAP
Trigger: GGGGGCCCGCAGGGGATGCCACGGTCGCCTCTGAGA...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCTCTCAGAGGCGACCGTaGCATCCCCTGCGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGSQRRP*HPLRAP
Trigger: GGGGGCCCGCAGGGGATGCCACGGTCGCCTCTGAGA...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACTCAGCCCCAAGAGGCTaGCGTGCTAGCCCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHSAPRG*RASPEA
Trigger: TGCCTCAGGGCTAGCACGCCAGCCTCTTGGGGCTGA...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434726.6
ENST00000594991.5
CDS-3UTR CCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACCGGAAGGCGGTGGTCTaGTGTCCGGGAGTAGCGGTT +
Preference number: 4 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHRKAVV*CPGVAV
Trigger: AACCGCTACTCCCGGACACCAGACCACCGCCTTCCG...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR CCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCACAGATCCCGGACGCCTaGATCCGGGAGGCGGGGACC +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRAQIPDA*IREAGT
Trigger: GGTCCCCGCCTCCCGGATCCAGGCGTCCGGGATCTG...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR CCA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGGGGACGTGGGGCCCTTaGCTCCAGGAGGTTGAGTGC +
Preference number: 4 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKGTWGP*LQEVEC
Trigger: GCACTCAACCTCCTGGAGCCAAGGGCCCCACGTCCC...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR CCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACTTAGCGCCTGGAAGCTaGCTGGGAGCGCTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHLAPGS*LGALGL
Trigger: GAGCCCAAGCGCTCCCAGCCAGCTTCCAGGCGCTAA...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR TCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACAGCCCATGGATGGCGTaGCCCAGCAGGCAGCACAGA +
Preference number: 4 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHSPWMA*PSRQHR
Trigger: TCTGTGCTGCCTGCTGGGTCACGCCATCCATGGGCT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR TCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACGAGGATCGGCCACCATaGTGGGAAGCACCGGGGTTT +
Preference number: 4 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHEDRPP*WEAPGF
Trigger: AAACCCCGGTGCTTCCCATCATGGTGGCCGATCCTC...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR TCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACGCCAGCAGCGTGGTaGCCAGGAAAAAGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHTPAAW*PGKRAA
Trigger: CGCTGCTCTTTTTCCTGGTCACCACGCTGCTGGCGT...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR TCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACATTGTGGGTTCGGGGTaGGGAATGCTGGCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHIVGSG*GMLASH
Trigger: GTGGGAGGCCAGCATTCCTCACCCCGAACCCACAAT...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594991.5
CDS-3UTR GCA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGCAGGGATGCCCGCTaGCCCCACGCTGGACGCTGT +
Preference number: 4 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGSRDAR*PHAGRC
Trigger: ACAGCGTCCAGCGTGGGGGCAGCGGGCATCCCTGCT...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR GCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAAGCAGGGATGCCCGCTaGCCCCACGCTGGACGCTGT +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRASRDAR*PHAGRC
Trigger: ACAGCGTCCAGCGTGGGGGCAGCGGGCATCCCTGCT...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR GCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACCTGCTCTGCCCCGTGTaGCAGATGTCCGAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHLLCPV*QMSESW
Trigger: CCAGCTTTCGGACATCTGGCACACGGGGCAGAGCAG...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR CCA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGAGGTCCCAAAGGCAGTaGCCAGCGGCGTCACGATGC +
Preference number: 4 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKRSQRQ*PAASRC
Trigger: GCATCGTGACGCCGCTGGCCACTGCCTTTGGGACCT...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACAGGTCCCAAAGGCAGTaGCCAGCGGCGTCACGATGC +
Preference number: 4 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHRSQRQ*PAASRC
Trigger: GCATCGTGACGCCGCTGGCCACTGCCTTTGGGACCT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACGCAGCGTGGCGGAACTaGAAGAGGTCCCAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHAAWRN*KRSQRQ
Trigger: CTGCCTTTGGGACCTCTTCCAGTTCCGCCACGCTGC...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAACTGCGGCCACGCACTaGAAGAGCGCGGCACCGTCC +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRATAATH*KSAAPS
Trigger: GGACGGTGCCGCGCTCTTCCAGTGCGTGGCCGCAGT...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCACTGCGGCCACGCACTaGAAGAGCGCGGCACCGTCC +
Preference number: 4 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGTAATH*KSAAPS
Trigger: GGACGGTGCCGCGCTCTTCCAGTGCGTGGCCGCAGT...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGTTCCTCAGTGGGGACTaGCAGCGGATCCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKFLSGD*QRIQGQ
Trigger: CTGCCCCTGGATCCGCTGCCAGTCCCCACTGAGGAA...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACTCAGCCCCAAGAGGCTaGCGTGCTAGCCCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHSAPRG*RASPEA
Trigger: TGCCTCAGGGCTAGCACGCCAGCCTCTTGGGGCTGA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434726.6
ENST00000594991.5
CDS-3UTR TCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACGAGGGCAGCATTGTCTaGGAGGCTGGGTTGGCGTTT +
Preference number: 4 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHEGSIV*EAGLAF
Trigger: AAACGCCAACCCAGCCTCTCAGACAATGCTGCCCTC...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434726.6
ENST00000594991.5
CDS-3UTR GCA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCATCCCCTCCACCTCCTaGCCCACGGGCACCTTCACC +
Preference number: 4 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGIPSTS*PTGTFT
Trigger: GGTGAAGGTGCCCGTGGGGCAGGAGGTGGAGGGGAT...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR GCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCACCAGCGGCGTCACGATaGCCCACAGGAAGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRAPAASR*PTGSGR
Trigger: CCTACCGCTTCCTGTGGGGCATCGTGACGCCGCTGG...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR GCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACGACCGGGAGGTTGACTaGTTCGAGGATGATGGCCAG +
Preference number: 4 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHDREVD*FEDDGQ
Trigger: CTGGCCATCATCCTCGAAGCAGTCAACCTCCCGGTC...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR GCA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCTGGCTCCCCAGAGTGTaGAGGCAGACCCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGWLPRV*RQTPRA
Trigger: GGCTCTGGGGGTCTGCCTGCACACTCTGGGGAGCCA...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR GCA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGTACAGCCCCTACTCATaGCTCAGCCCGGCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKYSPYS*LSPAGL
Trigger: CAACCCTGCCGGGCTGAGGCATGAGTAGGGGCTGTA...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434726.6
ENST00000594991.5
CDS-3UTR GCA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGCTTTGGGGGCCCGCCTaGACGCAAATACAGCCCCTA +
Preference number: 4 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKLWGPA*TQIQPL
Trigger: TAGGGGCTGTATTTGCGTGCAGGCGGGCCCCCAAAG...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000434726.6
ENST00000594991.5
CDS-3UTR GCA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCTCCGGGAGGGTGGGATaGGGGCCCCTGTGTACGGAA +
Preference number: 4 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGSGRVG*GPLCTE
Trigger: TTCCGTACACAGGGGCCCGCATCCCACCCTCCCGGA...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR GCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACGAGGCTTCTCTGCTCTaGCCCGTGTGCCAGATGTCC +
Preference number: 4 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHEASLL*PVCQMS
Trigger: GGACATCTGGCACACGGGGCAGAGCAGAGAAGCCTC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR CCA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCCCAGGAGCCCATGGATaGCGTGACCCAGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGPGAHG*RDPAGS
Trigger: GCTGCCTGCTGGGTCACGCCATCCATGGGCTCCTGG...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGGCAGCGTGGCGGAACTaGAAGAGGTCCCAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKAAWRN*KRSQRQ
Trigger: CTGCCTTTGGGACCTCTTCCAGTTCCGCCACGCTGC...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGTCATCAGCGGCAGCGTaGCGGAACTGGAAGAGGTCC +
Preference number: 4 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKSSAAA*RNWKRS
Trigger: GGACCTCTTCCAGTTCCGCCACGCTGCCGCTGATGA...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACTCATCAGCGGCAGCGTaGCGGAACTGGAAGAGGTCC +
Preference number: 4 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHSSAAA*RNWKRS
Trigger: GGACCTCTTCCAGTTCCGCCACGCTGCCGCTGATGA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACCCAGGCAGGTCACGGTaGGGACGCAGCAGAACATTA +
Preference number: 4 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHPGRSR*GRSRTL
Trigger: TAATGTTCTGCTGCGTCCCCACCGTGACCTGCCTGG...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR TCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACCAGGGGCGTACCACATaGTCCAGGAGACCAGAACCA +
Preference number: 4 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHQGRTT*SRRPEP
Trigger: TGGTTCTGGTCTCCTGGATCATGTGGTACGCCCCTG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR TCA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGCAGGGGCGTACCACATaGTCCAGGAGACCAGAACCA +
Preference number: 4 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKQGRTT*SRRPEP
Trigger: TGGTTCTGGTCTCCTGGATCATGTGGTACGCCCCTG...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR TCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACCGTCACCTTCTACATTaGGGACGGTACAGGACCGGT +
Preference number: 4 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHRHLLH*GRYRTG
Trigger: ACCGGTCCTGTACCGTCCTCAATGTAGAAGGTGACG...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR TCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACGCCCCCGATAGTGTTTaGGGAGGGGGTTTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHAPDSV*GGGFLP
Trigger: AGGAAGGAAACCCCCTCCTCAAACACTATCGGGGGC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR GCA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGCTGCTGGCTGAGCTGTaGAATGAACACTGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKLLAEL*NEHCGH
Trigger: GTGGCCGCAGTGTTCATTGCACAGCTCAGCCAGCAG...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR GCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACCTGCTGGCTGAGCTGTaGAATGAACACTGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHLLAEL*NEHCGH
Trigger: GTGGCCGCAGTGTTCATTGCACAGCTCAGCCAGCAG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR GCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACGACCGGGAGGTTGACTaGTTCGAGGATGATGGCCAG +
Preference number: 4 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHDREVD*FEDDGQ
Trigger: CTGGCCATCATCCTCGAAGCAGTCAACCTCCCGGTC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR GCA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGGACCGGGAGGTTGACTaGTTCGAGGATGATGGCCAG +
Preference number: 4 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKDREVD*FEDDGQ
Trigger: CTGGCCATCATCCTCGAAGCAGTCAACCTCCCGGTC...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR GCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCACTCCAGGAGGTTGAGTaGCCCCAGATGGCGGAGGTC +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRALQEVE*PQMAEV
Trigger: GACCTCCGCCATCTGGGGGCACTCAACCTCCTGGAG...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR GCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGCGCTGAGGCTTCTCTaGTCTGCCCCGTGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRAALRLL*SAPCAR
Trigger: TCTGGCACACGGGGCAGAGCAGAGAAGCCTCAGCGC...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR CCA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGTCCCAAAGGCAGTaGCCAGCGGCGTCACGATGC +
Preference number: 4 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGRSQRQ*PAASRC
Trigger: GCATCGTGACGCCGCTGGCCACTGCCTTTGGGACCT...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCATTCCTCAGTGGGGACTaGCAGCGGATCCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRAFLSGD*QRIQGQ
Trigger: CTGCCCCTGGATCCGCTGCCAGTCCCCACTGAGGAA...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGCCAGGCAGGTCACGGTaGGGACGCAGCAGAACATTA +
Preference number: 4 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKPGRSR*GRSRTL
Trigger: TAATGTTCTGCTGCGTCCCCACCGTGACCTGCCTGG...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACGGGTGGGACGTACCATaGGGACAGGAGGTCACAGAA +
Preference number: 4 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHGWDVP*GQEVTE
Trigger: TTCTGTGACCTCCTGTCCCCATGGTACGTCCCACCC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGGGGTGGGACGTACCATaGGGACAGGAGGTCACAGAA +
Preference number: 4 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKGWDVP*GQEVTE
Trigger: TTCTGTGACCTCCTGTCCCCATGGTACGTCCCACCC...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACAGCCCTGAGGCATTGTaGGTTCGGGGTGAGGAATGC +
Preference number: 4 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHSPEAL*VRGEEC
Trigger: GCATTCCTCACCCCGAACCCACAATGCCTCAGGGCT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434726.6
ENST00000594991.5
CDS-3UTR CCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACCCCCTTTGCAGGACTTaGGGAGTCAGCCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHPLCRT*GVSLLQ
Trigger: CTGAAGGAGGCTGACTCCCCAAGTCCTGCAAAGGGG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434726.6
ENST00000594991.5
CDS-3UTR CCA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGCGAGTGGAAGCTTTaGGGGCCCGCCTGCACGCAA +
Preference number: 4 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGSEWKL*GPACTQ
Trigger: TTGCGTGCAGGCGGGCCCCCAAAGCTTCCACTCGCT...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434726.6
ENST00000594991.5
CDS-3UTR CCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAAGCGAGTGGAAGCTTTaGGGGCCCGCCTGCACGCAA +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRASEWKL*GPACTQ
Trigger: TTGCGTGCAGGCGGGCCCCCAAAGCTTCCACTCGCT...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434726.6
ENST00000594991.5
CDS-3UTR CCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCATTAGGTCCGGGAGGGTaGGATGCGGGCCCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRALGPGG*DAGPCV
Trigger: TACACAGGGGCCCGCATCCCACCCTCCCGGACCTAA...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR CCA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCTGGGATGCCAGAATCTaGGGGCCGGGAAGCGGACCT +
Preference number: 4 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGWDARI*GPGSGP
Trigger: AGGTCCGCTTCCCGGCCCCCAGATTCTGGCATCCCA...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR CCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGAGGCTAGGTTCTGGTaGCGCAGATCCCGGACGCCT +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRAEARFW*RRSRTP
Trigger: AGGCGTCCGGGATCTGCGCCACCAGAACCTAGCCTC...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR CCA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCCAGGAGGCTAGGTTCTaGTGGCGCAGATCCCGGACG +
Preference number: 4 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGQEARF*WRRSRT
Trigger: CGTCCGGGATCTGCGCCACCAGAACCTAGCCTCCTG...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR CCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCATTGAGTGCCCCCAGATaGCGGAGGTCTGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRALSAPR*RRSAGG
Trigger: GCCTCCTGCAGACCTCCGCCATCTGGGGGCACTCAA...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR CCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCACAGATGTCCGAAAGCTaGGAGTTCGGAGCGCCCGGG +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRAQMSES*EFGAPG
Trigger: CCCGGGCGCTCCGAACTCCCAGCTTTCGGACATCTG...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR CCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACTTAAATTCCCCAGGCTaGGCGCTGAGGCTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHLNSPG*ALRLLC
Trigger: GCAGAGAAGCCTCAGCGCCCAGCCTGGGGAATTTAA...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR CCA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCGCAGCACAAGCAGGTTaGCTCGAAGGCAGCGGCGCA +
Preference number: 4 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGAAQAG*LEGSGA
Trigger: TGCGCCGCTGCCTTCGAGCCAACCTGCTTGTGCTGC...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR TCA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGCGTCACCTTCTACATTaGGGACGGTACAGGACCGGT +
Preference number: 4 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKRHLLH*GRYRTG
Trigger: ACCGGTCCTGTACCGTCCTCAATGTAGAAGGTGACG...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR TCA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCCCACCAGCGGCAAGATaGTCATCCGCAGCAGACGCA +
Preference number: 4 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGPPAAR*SSAADA
Trigger: TGCGTCTGCTGCGGATGATCATCTTGCCGCTGGTGG...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR GCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACGAAGTCCAAGGACTaGTGGCTGAGCTGTGCAATG +
Preference number: 4 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHTKSKD*WLSCAM
Trigger: CATTGCACAGCTCAGCCAGCAGTCCTTGGACTTCGT...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR GCA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGATTTTGGAGGAGTCCTaGCCCCAGAGCGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKILEES*PQSVTF
Trigger: GAAGGTGACGCTCTGGGGGCAGGACTCCTCCAAAAT...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR GCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACTCAACTCAGGCTCTGTaGTTCTCGACTCCGTACGGT +
Preference number: 4 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHSTQAL*FSTPYG
Trigger: ACCGTACGGAGTCGAGAAGCACAGAGCCTGAGTTGA...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR GCA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCTACAGCCCCTACTCATaGCTCAGCCCGGCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGYSPYS*LSPAGL
Trigger: CAACCCTGCCGGGCTGAGGCATGAGTAGGGGCTGTA...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434726.6
ENST00000594991.5
CDS-3UTR GCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCACTTTGGGGGCCCGCCTaGACGCAAATACAGCCCCTA +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRALWGPA*TQIQPL
Trigger: TAGGGGCTGTATTTGCGTGCAGGCGGGCCCCCAAAG...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000434726.6
ENST00000594991.5
CDS-3UTR CCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGCAGCGTGGCGGAACTaGAAGAGGTCCCAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRAAAWRN*KRSQRQ
Trigger: CTGCCTTTGGGACCTCTTCCAGTTCCGCCACGCTGC...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCGCAGCGTGGCGGAACTaGAAGAGGTCCCAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGAAWRN*KRSQRQ
Trigger: CTGCCTTTGGGACCTCTTCCAGTTCCGCCACGCTGC...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCATCATCAGCGGCAGCGTaGCGGAACTGGAAGAGGTCC +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRASSAAA*RNWKRS
Trigger: GGACCTCTTCCAGTTCCGCCACGCTGCCGCTGATGA...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACTCTGAGAGGCTGGGTTaGCGTTTTAAGGCAGCGAGT +
Preference number: 4 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHSERLG*RFKAAS
Trigger: ACTCGCTGCCTTAAAACGCCAACCCAGCCTCTCAGA...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434726.6
ENST00000594991.5
CDS-3UTR CCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGAGAGTTTCTCTGGGTaGGACGTGGGGCCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRAESFSG*DVGPLA
Trigger: AGCCAAGGGCCCCACGTCCCACCCAGAGAAACTCTC...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR CCA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCGGGTTTCTTAGCGCCTaGAAGCTGGCTGGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGGFLSA*KLAGSA
Trigger: AGCGCTCCCAGCCAGCTTCCAGGCGCTAAGAAACCC...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR CCA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCCGAGCACCTCCTTGCTaGGGGCATTTTCGGCACTGC +
Preference number: 4 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGRAPPC*GHFRHC
Trigger: GCAGTGCCGAAAATGCCCCCAGCAAGGAGGTGCTCG...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR TCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACTCACCCTGGTTCCGGTaGTATTCCTCTCTTCATAGG +
Preference number: 4 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHSPWFR*YSSLHR
Trigger: CCTATGAAGAGAGGAATATCACCGGAACCAGGGTGA...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR TCA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCGCCCCCGATAGTGTTTaGGGAGGGGGTTTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGAPDSV*GGGFLP
Trigger: AGGAAGGAAACCCCCTCCTCAAACACTATCGGGGGC...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR TCA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGCGGGGTTTACATGACTaGTTCCTTCTCAGAGGCGAC +
Preference number: 4 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKRGLHD*FLLRGD
Trigger: GTCGCCTCTGAGAAGGAATCAGTCATGTAAACCCCG...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR TCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACCGGGGTTTACATGACTaGTTCCTTCTCAGAGGCGAC +
Preference number: 4 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHRGLHD*FLLRGD
Trigger: GTCGCCTCTGAGAAGGAATCAGTCATGTAAACCCCG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR TCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACCTCCCGGGGTTTACATaGCTGATTCCTTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHLPGFT*LIPSQR
Trigger: CCTCTGAGAAGGAATCAGTCATGTAAACCCCGGGAG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR TCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACGAGAACTGGGGGTTTTaGGGAGTAACCCTTGTGAAC +
Preference number: 4 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHENWGF*GVTLVN
Trigger: GTTCACAAGGGTTACTCCTCAAAACCCCCAGTTCTC...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR TCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGAGGGCAGCATTGTCTaGGAGGCTGGGTTGGCGTTT +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRAEGSIV*EAGLAF
Trigger: AAACGCCAACCCAGCCTCTCAGACAATGCTGCCCTC...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434726.6
ENST00000594991.5
CDS-3UTR TCA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCCTGGGTCTTGGACACTaGGGGCTGGGATGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGLGLGH*GLGCQN
Trigger: ATTCTGGCATCCCAGCCCTCAGTGTCCAAGACCCAG...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR GCA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCCTGCTGGCTGAGCTGTaGAATGAACACTGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGLLAEL*NEHCGH
Trigger: GTGGCCGCAGTGTTCATTGCACAGCTCAGCCAGCAG...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR GCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGACCGGGAGGTTGACTaGTTCGAGGATGATGGCCAG +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRADREVD*FEDDGQ
Trigger: CTGGCCATCATCCTCGAAGCAGTCAACCTCCCGGTC...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR GCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACTCAACTCAGGCTCTGTaGTTCTCGACTCCGTACGGT +
Preference number: 4 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHSTQAL*FSTPYG
Trigger: ACCGTACGGAGTCGAGAAGCACAGAGCCTGAGTTGA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR GCA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGCTTGCACCCCTTTaGAGGACTTGGGGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGRLAPL*RTWGVS
Trigger: GCTGACTCCCCAAGTCCTGCAAAGGGGTGCAAGCCT...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434726.6
ENST00000594991.5
CDS-3UTR GCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAAGGCTTGCACCCCTTTaGAGGACTTGGGGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRARLAPL*RTWGVS
Trigger: GCTGACTCCCCAAGTCCTGCAAAGGGGTGCAAGCCT...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434726.6
ENST00000594991.5
CDS-3UTR GCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCACAGATGGCGGAGGTCTaGAGGAGGCTAGGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRAQMAEV*RRLGSG
Trigger: ACCAGAACCTAGCCTCCTGCAGACCTCCGCCATCTG...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR CCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACAAGTCCAAGGACTGCTaGCTGAGCTGTGCAATGAAC +
Preference number: 4 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHKSKDC*LSCAMN
Trigger: GTTCATTGCACAGCTCAGCCAGCAGTCCTTGGACTT...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACAGGATCAAGGAGATATaGTCGACCGGGAGGTTGACT +
Preference number: 4 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHRIKEI*STGRLT
Trigger: AGTCAACCTCCCGGTCGACCATATCTCCTTGATCCT...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCACCAGGCAGGTCACGGTaGGGACGCAGCAGAACATTA +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRAPGRSR*GRSRTL
Trigger: TAATGTTCTGCTGCGTCCCCACCGTGACCTGCCTGG...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAAGCCCTGAGGCATTGTaGGTTCGGGGTGAGGAATGC +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRASPEAL*VRGEEC
Trigger: GCATTCCTCACCCCGAACCCACAATGCCTCAGGGCT...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434726.6
ENST00000594991.5
CDS-3UTR CCA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCCCCCTTTGCAGGACTTaGGGAGTCAGCCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGPLCRT*GVSLLQ
Trigger: CTGAAGGAGGCTGACTCCCCAAGTCCTGCAAAGGGG...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000434726.6
ENST00000594991.5
CDS-3UTR CCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACTCTGAGAGGCTGGGTTaGCGTTTTAAGGCAGCGAGT +
Preference number: 4 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHSERLG*RFKAAS
Trigger: ACTCGCTGCCTTAAAACGCCAACCCAGCCTCTCAGA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434726.6
ENST00000594991.5
CDS-3UTR CCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCATTGGACACTGAGGGCTaGGATGCCAGAATCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRALDTEG*DARIWG
Trigger: CCCCCAGATTCTGGCATCCCAGCCCTCAGTGTCCAA...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR CCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACCTTGGCCCTAGGAGCTaGGAATACGAGAGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHLGPRS*EYESFS
Trigger: AGAGAAACTCTCGTATTCCCAGCTCCTAGGGCCAAG...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR TCA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGTCACCCTGGTTCCGGTaGTATTCCTCTCTTCATAGG +
Preference number: 4 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKSPWFR*YSSLHR
Trigger: CCTATGAAGAGAGGAATATCACCGGAACCAGGGTGA...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR TCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCACGTCACCTTCTACATTaGGGACGGTACAGGACCGGT +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRARHLLH*GRYRTG
Trigger: ACCGGTCCTGTACCGTCCTCAATGTAGAAGGTGACG...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR TCA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGGAGAACTGGGGGTTTTaGGGAGTAACCCTTGTGAAC +
Preference number: 4 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKENWGF*GVTLVN
Trigger: GTTCACAAGGGTTACTCCTCAAAACCCCCAGTTCTC...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR TCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACGTGAGTTCACAGCACTaGAGTTCCTTGGCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHVSSQH*SSLALG
Trigger: TCCAAGAGCCAAGGAACTTCAGTGCTGTGAACTCAC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR TCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACTTCCTAGGACTGAGTTaGGTAACAGCACCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHFLGLS*VTAPGD
Trigger: GTCTCCAGGTGCTGTTACTCAACTCAGTCCTAGGAA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR GCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACATGAAACGGCTGATGTaGTTGGCCACGCCATTATTC +
Preference number: 4 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHMKRLM*LATPLF
Trigger: GAATAATGGCGTGGCCAAGCACATCAGCCGTTTCAT...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR GCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAATTTTGGAGGAGTCCTaGCCCCAGAGCGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRAILEES*PQSVTF
Trigger: GAAGGTGACGCTCTGGGGGCAGGACTCCTCCAAAAT...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR GCA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCATTTTGGAGGAGTCCTaGCCCCAGAGCGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGILEES*PQSVTF
Trigger: GAAGGTGACGCTCTGGGGGCAGGACTCCTCCAAAAT...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR GCA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAATCGAGCACCTCCTTaGTGGGGGCATTTTCGGCAC +
Preference number: 4 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGNRAPP*WGHFRH
Trigger: GTGCCGAAAATGCCCCCAGCAAGGAGGTGCTCGATT...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR GCA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGCTCAGCTCCACCCCATaGAGCAAACTTAATACCCTG +
Preference number: 4 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKLSSTP*SKLNTL
Trigger: CAGGGTATTAAGTTTGCTGCATGGGGTGGAGCTGAG...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594991.5
CDS-3UTR CCA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCTTTACTCCCGAGGGCTaGAGCCTCCCCTCAATATCC +
Preference number: 4 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGFTPEG*SLPSIS
Trigger: GGATATTGAGGGGAGGCTCCAGCCCTCGGGAGTAAA...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412532.6
CDS-3UTR CCA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGCCACACCAAAGACGATaGCAAACACTACCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKPHQRR*QTLPSP
Trigger: TGGGCTTGGTAGTGTTTGCCATCGTCTTTGGTGTGG...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGAAGTCCAAGGACTGCTaGCTGAGCTGTGCAATGAAC +
Preference number: 4 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKKSKDC*LSCAMN
Trigger: GTTCATTGCACAGCTCAGCCAGCAGTCCTTGGACTT...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACAAGTCCAAGGACTGCTaGCTGAGCTGTGCAATGAAC +
Preference number: 4 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHKSKDC*LSCAMN
Trigger: GTTCATTGCACAGCTCAGCCAGCAGTCCTTGGACTT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACAGGATCAAGGAGATATaGTCGACCGGGAGGTTGACT +
Preference number: 4 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHRIKEI*STGRLT
Trigger: AGTCAACCTCCCGGTCGACCATATCTCCTTGATCCT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCATACGAGAGTTTCTCTaGGTGGGACGTGGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGIREFL*VGRGAL
Trigger: AAGGGCCCCACGTCCCACCCAGAGAAACTCTCGTAT...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR TCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCACGGGGTTTACATGACTaGTTCCTTCTCAGAGGCGAC +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRARGLHD*FLLRGD
Trigger: GTCGCCTCTGAGAAGGAATCAGTCATGTAAACCCCG...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR TCA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCCGGGGTTTACATGACTaGTTCCTTCTCAGAGGCGAC +
Preference number: 4 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGRGLHD*FLLRGD
Trigger: GTCGCCTCTGAGAAGGAATCAGTCATGTAAACCCCG...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR TCA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCCTCCCGGGGTTTACATaGCTGATTCCTTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGLPGFT*LIPSQR
Trigger: CCTCTGAGAAGGAATCAGTCATGTAAACCCCGGGAG...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR TCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCACTCCCGGGGTTTACATaGCTGATTCCTTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRALPGFT*LIPSQR
Trigger: CCTCTGAGAAGGAATCAGTCATGTAAACCCCGGGAG...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR TCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACGGCTCCTTAGAGTTGTaGGTTCACAGCACTGAAGTT +
Preference number: 4 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHGSLEL*VHSTEV
Trigger: AACTTCAGTGCTGTGAACTCACAACTCTAAGGAGCC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR GCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACAGCACAGAATGTACTTaGCAAGGCGGGCAAAGAGTA +
Preference number: 4 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHSTECT*QGGQRV
Trigger: TACTCTTTGCCCGCCTTGGCAAGTACATTCTGTGCT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR GCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACATGAAACGGCTGATGTaGTTGGCCACGCCATTATTC +
Preference number: 4 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHMKRLM*LATPLF
Trigger: GAATAATGGCGTGGCCAAGCACATCAGCCGTTTCAT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR GCA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGATGAAACGGCTGATGTaGTTGGCCACGCCATTATTC +
Preference number: 4 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKMKRLM*LATPLF
Trigger: GAATAATGGCGTGGCCAAGCACATCAGCCGTTTCAT...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR GCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAACGAAGTCCAAGGACTaGTGGCTGAGCTGTGCAATG +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRATKSKD*WLSCAM
Trigger: CATTGCACAGCTCAGCCAGCAGTCCTTGGACTTCGT...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR GCA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCACGAAGTCCAAGGACTaGTGGCTGAGCTGTGCAATG +
Preference number: 4 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGTKSKD*WLSCAM
Trigger: CATTGCACAGCTCAGCCAGCAGTCCTTGGACTTCGT...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR GCA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCTCAACTCAGGCTCTGTaGTTCTCGACTCCGTACGGT +
Preference number: 4 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGSTQAL*FSTPYG
Trigger: ACCGTACGGAGTCGAGAAGCACAGAGCCTGAGTTGA...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACCTGCTGACACCAGGTTaGAAGGGAAGATATTTACTC +
Preference number: 4 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHLLTPG*KGRYLL
Trigger: GAGTAAATATCTTCCCTTCCAACCTGGTGTCAGCAG...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412532.6
CDS-3UTR CCA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCACAGCACCTGGAGACTaGAACTTTGGAGGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGTAPGD*NFGGLL
Trigger: AAGGAGCCCTCCAAAGTTCCAGTCTCCAGGTGCTGT...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR CCA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACTTGAGTAACAGCACCTaGAGACTGGAACTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHLSNST*RLELWR
Trigger: CCTCCAAAGTTCCAGTCTCCAGGTGCTGTTACTCAA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR TCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCATCACCCTGGTTCCGGTaGTATTCCTCTCTTCATAGG +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRASPWFR*YSSLHR
Trigger: CCTATGAAGAGAGGAATATCACCGGAACCAGGGTGA...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR TCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCACTTGAGTTGGGGACATaGGTGAGAACTGGGGGTTTT +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRALELGT*VRTGGF
Trigger: AAAACCCCCAGTTCTCACTCATGTCCCCAACTCAAG...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCACCACACCAAAGACGATaGCAAACACTACCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRAPHQRR*QTLPSP
Trigger: TGGGCTTGGTAGTGTTTGCCATCGTCTTTGGTGTGG...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAAAGTCCAAGGACTGCTaGCTGAGCTGTGCAATGAAC +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRAKSKDC*LSCAMN
Trigger: GTTCATTGCACAGCTCAGCCAGCAGTCCTTGGACTT...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGATCAAGGAGATATaGTCGACCGGGAGGTTGACT +
Preference number: 4 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGRIKEI*STGRLT
Trigger: AGTCAACCTCCCGGTCGACCATATCTCCTTGATCCT...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCACATTGTCTGAGAGGCTaGGTTGGCGTTTTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRAHCLRG*VGVLRQ
Trigger: CTGCCTTAAAACGCCAACCCAGCCTCTCAGACAATG...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434726.6
ENST00000594991.5
CDS-3UTR CCA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCCATTGTCTGAGAGGCTaGGTTGGCGTTTTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGHCLRG*VGVLRQ
Trigger: CTGCCTTAAAACGCCAACCCAGCCTCTCAGACAATG...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434726.6
ENST00000594991.5
CDS-3UTR CCA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCCTGCTGACACCAGGTTaGAAGGGAAGATATTTCTCG +
Preference number: 4 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGLLTPG*KGRYFS
Trigger: CGAGAAATATCTTCCCTTCCAACCTGGTGTCAGCAG...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR CCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCACTGCTGACACCAGGTTaGAAGGGAAGATATTTCTGC +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRALLTPG*KGRYFC
Trigger: GCAGAAATATCTTCCCTTCCAACCTGGTGTCAGCAG...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594991.5
CDS-3UTR CCA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAAAGTTCCTTGGCTCTTaGAAGCTGGAGTGTTTAAAT +
Preference number: 4 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRAKFLGS*KLECLN
Trigger: ATTTAAACACTCCAGCTTCCAAGAGCCAAGGAACTT...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS GCA 90 bp TCGAAGGCAGCGGCGCACCTGGTCCCGGGAACCGCAGTAGCCGCCTaGTGCCGCGCCTTGGTCCTCGATGGAGGCCAGCGCCAGGCCCCC +
Preference number: 5 (lower is better)
Translates to: SKAAAHLVPGTAVAA*CRALVLDGGQRQAP
Trigger: GGGGGCCTGGCGCTGGCCTCCATCGAGGACCAAGGCGCGGCAGCAGGCGGCTACTGCGGTTCCCGGGACCAGGTGCGCCGCTGCCTTCGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS CCA 90 bp CTGCCGCGCCTTGGTCCTCGATGGAGGCCAGCGCCAGGCCCCCGTTaGCGGTGGGCTCCGCCGCTGCGAGCCCCTTGGAGTCTCGAGGAG +
Preference number: 5 (lower is better)
Translates to: LPRLGPRWRPAPGPR*RWAPPLRAPWSLEE
Trigger: CTCCTCGAGACTCCAAGGGGCTCGCAGCGGCGGAGCCCACCGCCAACGGGGGCCTGGCGCTGGCCTCCATCGAGGACCAAGGCGCGGCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS CCA 90 bp CGCCTTGGTCCTCGATGGAGGCCAGCGCCAGGCCCCCGTTGGCGGTaGGCTCCGCCGCTGCGAGCCCCTTGGAGTCTCGAGGAGGATCGG +
Preference number: 5 (lower is better)
Translates to: RLGPRWRPAPGPRWR*APPLRAPWSLEEDR
Trigger: CCGATCCTCCTCGAGACTCCAAGGGGCTCGCAGCGGCGGAGCCCACCGCCAACGGGGGCCTGGCGCTGGCCTCCATCGAGGACCAAGGCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS GCA 90 bp GGCTGGCGTGCTAGCCCTGAGGCATTGTGGGTTCGGGGTGAGGAATaGTGGCCTCCCACGGCAGGCCAGGGCAGGTCGCCCCGGGCCTCA +
Preference number: 5 (lower is better)
Translates to: GWRASPEALWVRGEE*WPPTAGQGRSPRAS
Trigger: TGAGGCCCGGGGCGACCTGCCCTGGCCTGCCGTGGGAGGCCAGCATTCCTCACCCCGAACCCACAATGCCTCAGGGCTAGCACGCCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594991.5
CDS CCA 90 bp TGGCGTGCTAGCCCTGAGGCATTGTGGGTTCGGGGTGAGGAATGCTaGCCTCCCACGGCAGGCCAGGGCAGGTCGCCCCGGGCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: WRASPEALWVRGEEC*PPTAGQGRSPRASA
Trigger: AGCTGAGGCCCGGGGCGACCTGCCCTGGCCTGCCGTGGGAGGCCAGCATTCCTCACCCCGAACCCACAATGCCTCAGGGCTAGCACGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594991.5
CDS CCA 90 bp CCGGGAGGGTGGGATGCGGGCCCCTGTGTACGGAAGGCGGTGGTCTaGTGTCCGGGAGTAGCGGTTACCAGCCAGAGAAAGCCTCCCGGG +
Preference number: 5 (lower is better)
Translates to: PGGWDAGPCVRKAVV*CPGVAVTSQRKPPG
Trigger: CCCGGGAGGCTTTCTCTGGCTGGTAACCGCTACTCCCGGACACCAGACCACCGCCTTCCGTACACAGGGGCCCGCATCCCACCCTCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS CCA 90 bp CGGACCTCCGGAAACAGGGGACCCAGGCTCTTAGGTCCGGGAGGGTaGGATGCGGGCCCCTGTGTACGGAAGGCGGTGGTCTGGTGTCCG +
Preference number: 5 (lower is better)
Translates to: RTSGNRGPRLLGPGG*DAGPCVRKAVVWCP
Trigger: CGGACACCAGACCACCGCCTTCCGTACACAGGGGCCCGCATCCCACCCTCCCGGACCTAAGAGCCTGGGTCCCCTGTTTCCGGAGGTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS CCA 90 bp CCTCCTTCAGCCCCAAGAGGCTGGCGTGCTAGCCCTGAGGCATTGTaGGTTCGGGGTGAGGAATGCTGGCCTCCCACGGCAGGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: PPSAPRGWRASPEAL*VRGEECWPPTAGQG
Trigger: GCCCTGGCCTGCCGTGGGAGGCCAGCATTCCTCACCCCGAACCCACAATGCCTCAGGGCTAGCACGCCAGCCTCTTGGGGCTGAAGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594991.5
CDS TCA 90 bp CCGCCGCTGCGAGCCCCTTGGAGTCTCGAGGAGGATCGGCCACCATaGTGGGAAGCACCGGGGTTTCTTAGCGCCTGGAAGCTGGCTGGG +
Preference number: 5 (lower is better)
Translates to: PPLRAPWSLEEDRPP*WEAPGFLSAWKLAG
Trigger: CCCAGCCAGCTTCCAGGCGCTAAGAAACCCCGGTGCTTCCCATCATGGTGGCCGATCCTCCTCGAGACTCCAAGGGGCTCGCAGCGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS GCA 90 bp GGCCCTTGGCTCCAGGAGGTTGAGTGCCCCCAGATGGCGGAGGTCTaGAGGAGGCTAGGTTCTGGTGGCGCAGATCCCGGACGCCTGGAT +
Preference number: 5 (lower is better)
Translates to: GPWLQEVECPQMAEV*RRLGSGGADPGRLD
Trigger: ATCCAGGCGTCCGGGATCTGCGCCACCAGAACCTAGCCTCCTGCAGACCTCCGCCATCTGGGGGCACTCAACCTCCTGGAGCCAAGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS GCA 90 bp GTTTCTCTGGGTGGGACGTGGGGCCCTTGGCTCCAGGAGGTTGAGTaGCCCCAGATGGCGGAGGTCTGCAGGAGGCTAGGTTCTGGTGGC +
Preference number: 5 (lower is better)
Translates to: VSLGGTWGPWLQEVE*PQMAEVCRRLGSGG
Trigger: GCCACCAGAACCTAGCCTCCTGCAGACCTCCGCCATCTGGGGGCACTCAACCTCCTGGAGCCAAGGGCCCCACGTCCCACCCAGAGAAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS CCA 90 bp GGAGCTGGGAATACGAGAGTTTCTCTGGGTGGGACGTGGGGCCCTTaGCTCCAGGAGGTTGAGTGCCCCCAGATGGCGGAGGTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GAGNTRVSLGGTWGP*LQEVECPQMAEVCR
Trigger: CCTGCAGACCTCCGCCATCTGGGGGCACTCAACCTCCTGGAGCCAAGGGCCCCACGTCCCACCCAGAGAAACTCTCGTATTCCCAGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS CCA 90 bp GCTGAGGCTTCTCTGCTCTGCCCCGTGTGCCAGATGTCCGAAAGCTaGGAGTTCGGAGCGCCCGGGTTCCTTGGCCCTAGGAGCTGGGAA +
Preference number: 5 (lower is better)
Translates to: AEASLLCPVCQMSES*EFGAPGFLGPRSWE
Trigger: TTCCCAGCTCCTAGGGCCAAGGAACCCGGGCGCTCCGAACTCCCAGCTTTCGGACATCTGGCACACGGGGCAGAGCAGAGAAGCCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS CCA 90 bp TTGGCCCTAGGAGCTGGGAATACGAGAGTTTCTCTGGGTGGGACGTaGGGCCCTTGGCTCCAGGAGGTTGAGTGCCCCCAGATGGCGGAG +
Preference number: 5 (lower is better)
Translates to: LALGAGNTRVSLGGT*GPWLQEVECPQMAE
Trigger: CTCCGCCATCTGGGGGCACTCAACCTCCTGGAGCCAAGGGCCCCACGTCCCACCCAGAGAAACTCTCGTATTCCCAGCTCCTAGGGCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS CCA 90 bp GAAAGCTGGGAGTTCGGAGCGCCCGGGTTCCTTGGCCCTAGGAGCTaGGAATACGAGAGTTTCTCTGGGTGGGACGTGGGGCCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: ESWEFGAPGFLGPRS*EYESFSGWDVGPLA
Trigger: AGCCAAGGGCCCCACGTCCCACCCAGAGAAACTCTCGTATTCCCAGCTCCTAGGGCCAAGGAACCCGGGCGCTCCGAACTCCCAGCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS GCA 90 bp GGAGTGTTTAAATTCCCCAGGCTGGGCGCTGAGGCTTCTCTGCTCTaGCCCGTGTGCCAGATGTCCGAAAGCTGGGAGTTCGGAGCGCCC +
Preference number: 5 (lower is better)
Translates to: GVFKFPRLGAEASLL*PVCQMSESWEFGAP
Trigger: GGGCGCTCCGAACTCCCAGCTTTCGGACATCTGGCACACGGGGCAGAGCAGAGAAGCCTCAGCGCCCAGCCTGGGGAATTTAAACACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR CAA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACGCGGCACCGTCCATGTaGACGGTGGCGCCGATGGGC +
Preference number: 5 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHAAPSM*TVAPMG
Trigger: GCCCATCGGCGCCACCGTCAACATGGACGGTGCCGC...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CAA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACGCCTGCTGCCGCGCCTaGGTCCTCGATGGAGGCCAG +
Preference number: 5 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHACCRA*VLDGGQ
Trigger: CTGGCCTCCATCGAGGACCAAGGCGCGGCAGCAGGC...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR CAA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGGCGGCACCGTCCATGTaGACGGTGGCGCCGATGGGC +
Preference number: 5 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKAAPSM*TVAPMG
Trigger: GCCCATCGGCGCCACCGTCAACATGGACGGTGCCGC...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS GCA 90 bp GGAAGATATTTCTCGCAAGATCCAGGAACGAATCGAGCACCTCCTTaGTGGGGGCATTTTCGGCACTGCCCGCGGCTCCCACGGAGGCGT +
Preference number: 5 (lower is better)
Translates to: GRYFSQDPGTNRAPP*WGHFRHCPRLPRRR
Trigger: ACGCCTCCGTGGGAGCCGCGGGCAGTGCCGAAAATGCCCCCAGCAAGGAGGTGCTCGATTCGTTCCTGGATCTTGCGAGAAATATCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR CAA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGCAGCGAGTGGAAGCTTaGGGGGCCCGCCTGCACGCA +
Preference number: 5 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKQRVEA*GARLHA
Trigger: TGCGTGCAGGCGGGCCCCCAAAGCTTCCACTCGCTG...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000434726.6
ENST00000594991.5
CDS-3UTR CAA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACAGCAGCACAAGCAGGTaGGCTCGAAGGCAGCGGCGC +
Preference number: 5 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHSSTSR*ARRQRR
Trigger: GCGCCGCTGCCTTCGAGCCAACCTGCTTGTGCTGCT...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS GCA 90 bp AAGCTGGAGTGTTTAAATTCCCCAGGCTGGGCGCTGAGGCTTCTCTaGTCTGCCCCGTGTGCCAGATGTCCGAAAGCTGGGAGTTCGGAG +
Preference number: 5 (lower is better)
Translates to: KLECLNSPGWALRLL*SAPCARCPKAGSSE
Trigger: CTCCGAACTCCCAGCTTTCGGACATCTGGCACACGGGGCAGAGCAGAGAAGCCTCAGCGCCCAGCCTGGGGAATTTAAACACTCCAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS CCA 90 bp CAGGACCGGTCGACTAGCCAGTCCACAGCCAGGATCAAGGAGATATaGTCGACCGGGAGGTTGACTGCTTCGAGGATGATGGCCAGAGTG +
Preference number: 5 (lower is better)
Translates to: QDRSTSQSTARIKEI*STGRLTASRMMARV
Trigger: CACTCTGGCCATCATCCTCGAAGCAGTCAACCTCCCGGTCGACCATATCTCCTTGATCCTGGCTGTGGACTGGCTAGTCGACCGGTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CAA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGCGGCACCGTCCATGTaGACGGTGGCGCCGATGGGC +
Preference number: 5 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRAAAPSM*TVAPMG
Trigger: GCCCATCGGCGCCACCGTCAACATGGACGGTGCCGC...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CAA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGCTCAGCCCGGCAGGGTaGGAACTAGGCTTGCACCCC +
Preference number: 5 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKLSPAG*ELGLHP
Trigger: GGGGTGCAAGCCTAGTTCCAACCCTGCCGGGCTGAG...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434726.6
ENST00000594991.5
CDS-3UTR CAA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACCTCAGCCCGGCAGGGTaGGAACTAGGCTTGCACCCC +
Preference number: 5 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHLSPAG*ELGLHP
Trigger: GGGGTGCAAGCCTAGTTCCAACCCTGCCGGGCTGAG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434726.6
ENST00000594991.5
CDS-3UTR CAA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACCTTGGCTCCAGGAGGTaGAGTGCCCCCAGATGGCGG +
Preference number: 5 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHLGSRR*SAPRWR
Trigger: CCGCCATCTGGGGGCACTCAACCTCCTGGAGCCAAG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS TCA 90 bp CGTAATTTTGGAGGAGTCCTGCCCCCAGAGCGTCACCTTCTACATTaGGGACGGTACAGGACCGGTCGACTAGCCAGTCCACAGCCAGGA +
Preference number: 5 (lower is better)
Translates to: RNFGGVLPPERHLLH*GRYRTGRLASPQPG
Trigger: TCCTGGCTGTGGACTGGCTAGTCGACCGGTCCTGTACCGTCCTCAATGTAGAAGGTGACGCTCTGGGGGCAGGACTCCTCCAAAATTACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS GCA 90 bp GGAGCCCATGGATGGCGTGACCCAGCAGGCAGCACAGAATGTACTTaGCAAGGCGGGCAAAGAGTAAACCCACATCCTCCATCTCCACGA +
Preference number: 5 (lower is better)
Translates to: GAHGWRDPAGSTECT*QGGQRVNPHPPSPR
Trigger: TCGTGGAGATGGAGGATGTGGGTTTACTCTTTGCCCGCCTTGGCAAGTACATTCTGTGCTGCCTGCTGGGTCACGCCATCCATGGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000593713.1
ENST00000594991.5
CDS GCA 90 bp GATGGTGATGATCTTTACGAAGTCCAAGGACTGCTGGCTGAGCTGTaGAATGAACACTGCGGCCACGCACTGGAAGAGCGCGGCACCGTC +
Preference number: 5 (lower is better)
Translates to: DGDDLYEVQGLLAEL*NEHCGHALEERGTV
Trigger: GACGGTGCCGCGCTCTTCCAGTGCGTGGCCGCAGTGTTCATTGCACAGCTCAGCCAGCAGTCCTTGGACTTCGTAAAGATCATCACCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000593713.1
ENST00000594991.5
CDS GCA 90 bp GTCCACAGCCAGGATCAAGGAGATATGGTCGACCGGGAGGTTGACTaGTTCGAGGATGATGGCCAGAGTGAGGACACCTCCAGCAGGGAT +
Preference number: 5 (lower is better)
Translates to: VHSQDQGDMVDREVD*FEDDGQSEDTSSRD
Trigger: ATCCCTGCTGGAGGTGTCCTCACTCTGGCCATCATCCTCGAAGCAGTCAACCTCCCGGTCGACCATATCTCCTTGATCCTGGCTGTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS CCA 90 bp AAGTTCCTTGGCTCTTGGAAGCTGGAGTGTTTAAATTCCCCAGGCTaGGCGCTGAGGCTTCTCTGCTCTGCCCCGTGTGCCAGATGTCCG +
Preference number: 5 (lower is better)
Translates to: KFLGSWKLECLNSPG*ALRLLCSAPCARCP
Trigger: CGGACATCTGGCACACGGGGCAGAGCAGAGAAGCCTCAGCGCCCAGCCTGGGGAATTTAAACACTCCAGCTTCCAAGAGCCAAGGAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR CAA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCACAGCGAGTGGAAGCTTaGGGGGCCCGCCTGCACGCA +
Preference number: 5 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRAQRVEA*GARLHA
Trigger: TGCGTGCAGGCGGGCCCCCAAAGCTTCCACTCGCTG...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000434726.6
ENST00000594991.5
CDS-3UTR CAA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCGCCGCTGCGAGCCCCTaGGAGTCTCGAGGAGGATCG +
Preference number: 5 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGAAASP*ESRGGS
Trigger: CGATCCTCCTCGAGACTCCAAGGGGCTCGCAGCGGC...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS GCA 90 bp TGTGCTTCTCGACTCCGTACGGTCCACGTAATTTTGGAGGAGTCCTaGCCCCAGAGCGTCACCTTCTACATTGAGGACGGTACAGGACCG +
Preference number: 5 (lower is better)
Translates to: CASRLRTVHVILEES*PQSVTFYIEDGTGP
Trigger: CGGTCCTGTACCGTCCTCAATGTAGAAGGTGACGCTCTGGGGGCAGGACTCCTCCAAAATTACGTGGACCGTACGGAGTCGAGAAGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CAA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACTGGTCGACCGGGAGGTaGACTGCTTCGAGGATGATG +
Preference number: 5 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHWSTGR*TASRMM
Trigger: CATCATCCTCGAAGCAGTCAACCTCCCGGTCGACCA...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CAA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACGCGTCACCTTCTACATaGAGGACGGTACAGGACCGG +
Preference number: 5 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHASPST*RTVQDR
Trigger: CCGGTCCTGTACCGTCCTCAATGTAGAAGGTGACGC...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CAA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGGCTAGCCCTGAGGCATaGTGGGTTCGGGGTGAGGAA +
Preference number: 5 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKASPEA*WVRGEE
Trigger: TTCCTCACCCCGAACCCACAATGCCTCAGGGCTAGC...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434726.6
ENST00000594991.5
CDS-3UTR CAA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACCCCTTTGCAGGACTaGGGGAGTCAGCCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHTPLQD*GSQPPS
Trigger: TGAAGGAGGCTGACTCCCCAAGTCCTGCAAAGGGGT...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434726.6
ENST00000594991.5
CDS-3UTR CAA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGTGGTCGACCGGGAGGTaGACTGCTTCGAGGATGATG +
Preference number: 5 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKWSTGR*TASRMM
Trigger: CATCATCCTCGAAGCAGTCAACCTCCCGGTCGACCA...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CAA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGGCGTCACCTTCTACATaGAGGACGGTACAGGACCGG +
Preference number: 5 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKASPST*RTVQDR
Trigger: CCGGTCCTGTACCGTCCTCAATGTAGAAGGTGACGC...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CAA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACGCGTCACCTTCTACATaGAGGACGGTACAGGACCGG +
Preference number: 5 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHASPST*RTVQDR
Trigger: CCGGTCCTGTACCGTCCTCAATGTAGAAGGTGACGC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CAA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGACGGTCCACGTAATTTaGGAGGAGTCCTGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKTVHVI*EESCPQ
Trigger: CTGGGGGCAGGACTCCTCCAAAATTACGTGGACCGT...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CAA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACGGGTTGGAACTAGGCTaGCACCCCTTTGCAGGACTT +
Preference number: 5 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHGLELG*HPFAGL
Trigger: AAGTCCTGCAAAGGGGTGCAAGCCTAGTTCCAACCC...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434726.6
ENST00000594991.5
CDS-3UTR CAA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGGAATCGAGCACCTCCTaGCTGGGGGCATTTTCGGCA +
Preference number: 5 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKESSTS*LGAFSA
Trigger: TGCCGAAAATGCCCCCAGCAAGGAGGTGCTCGATTC...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR CAA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACCATGGTGGCCTCATaGAAGGAGTTGAAGAAGCGG +
Preference number: 5 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHTMVAS*KELKKR
Trigger: CCGCTTCTTCAACTCCTTCAATGAGGCCACCATGGT...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CAA 90 bp TGGGACGTACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACCAGCACAGAATGTACTaGCCAAGGCGGGCAAAGAGT +
Preference number: 5 (lower is better)
Translates to: WDVPWGQEVTEHTHTHTHQHRMY*PRRAKS
Trigger: ACTCTTTGCCCGCCTTGGCAAGTACATTCTGTGCTG...GTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGTACGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CAA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCGCTAGCCCTGAGGCATaGTGGGTTCGGGGTGAGGAA +
Preference number: 5 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGASPEA*WVRGEE
Trigger: TTCCTCACCCCGAACCCACAATGCCTCAGGGCTAGC...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434726.6
ENST00000594991.5
CDS GCA 90 bp GATCCAGGGGCAGCTCACTCTTCACTTGTATCAACTCAGGCTCTGTaGTTCTCGACTCCGTACGGTCCACGTAATTTTGGAGGAGTCCTG +
Preference number: 5 (lower is better)
Translates to: DPGAAHSSLVSTQAL*FSTPYGPRNFGGVL
Trigger: CAGGACTCCTCCAAAATTACGTGGACCGTACGGAGTCGAGAAGCACAGAGCCTGAGTTGATACAAGTGAAGAGTGAGCTGCCCCTGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CAA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGACCATGGTGGCCTCATaGAAGGAGTTGAAGAAGCGG +
Preference number: 5 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKTMVAS*KELKKR
Trigger: CCGCTTCTTCAACTCCTTCAATGAGGCCACCATGGT...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CAA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACCAGCACAGAATGTACTaGCCAAGGCGGGCAAAGAGT +
Preference number: 5 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHQHRMY*PRRAKS
Trigger: ACTCTTTGCCCGCCTTGGCAAGTACATTCTGTGCTG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CAA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGCAGCACAGAATGTACTaGCCAAGGCGGGCAAAGAGT +
Preference number: 5 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKQHRMY*PRRAKS
Trigger: ACTCTTTGCCCGCCTTGGCAAGTACATTCTGTGCTG...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CAA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGAAACGGCTGATGTGCTaGGCCACGCCATTATTCTCC +
Preference number: 5 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKKRLMC*ATPLFS
Trigger: GGAGAATAATGGCGTGGCCAAGCACATCAGCCGTTT...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CAA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACAAACGGCTGATGTGCTaGGCCACGCCATTATTCTCC +
Preference number: 5 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHKRLMC*ATPLFS
Trigger: GGAGAATAATGGCGTGGCCAAGCACATCAGCCGTTT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CAA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCTGGTCGACCGGGAGGTaGACTGCTTCGAGGATGATG +
Preference number: 5 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGWSTGR*TASRMM
Trigger: CATCATCCTCGAAGCAGTCAACCTCCCGGTCGACCA...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CAA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGCGTCACCTTCTACATaGAGGACGGTACAGGACCGG +
Preference number: 5 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRAASPST*RTVQDR
Trigger: CCGGTCCTGTACCGTCCTCAATGTAGAAGGTGACGC...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CAA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAACGGTCCACGTAATTTaGGAGGAGTCCTGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRATVHVI*EESCPQ
Trigger: CTGGGGGCAGGACTCCTCCAAAATTACGTGGACCGT...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CAA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCACGGTCCACGTAATTTaGGAGGAGTCCTGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGTVHVI*EESCPQ
Trigger: CTGGGGGCAGGACTCCTCCAAAATTACGTGGACCGT...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CAA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAACCCCTTTGCAGGACTaGGGGAGTCAGCCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRATPLQD*GSQPPS
Trigger: TGAAGGAGGCTGACTCCCCAAGTCCTGCAAAGGGGT...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434726.6
ENST00000594991.5
CDS-3UTR CAA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGTTGGAACTAGGCTaGCACCCCTTTGCAGGACTT +
Preference number: 5 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRAGLELG*HPFAGL
Trigger: AAGTCCTGCAAAGGGGTGCAAGCCTAGTTCCAACCC...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434726.6
ENST00000594991.5
CDS-3UTR CAA 90 bp TATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGGGAAGGTTCCTAGGACTGAGTaGAGTAACAGCACCTGGAGA +
Preference number: 5 (lower is better)
Translates to: YPFLIIQCPKSTPSRAGKVPRTE*SNSTWR
Trigger: TCTCCAGGTGCTGTTACTCAACTCAGTCCTAGGAAC...CTTCCCTGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR CAA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACGCTGCTGACACCAGGTaGGAAGGGAAGATATTTCTC +
Preference number: 5 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHAADTR*EGKIFL
Trigger: GAGAAATATCTTCCCTTCCAACCTGGTGTCAGCAGC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR CAA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCACCATGGTGGCCTCATaGAAGGAGTTGAAGAAGCGG +
Preference number: 5 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGTMVAS*KELKKR
Trigger: CCGCTTCTTCAACTCCTTCAATGAGGCCACCATGGT...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CAA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAACCATGGTGGCCTCATaGAAGGAGTTGAAGAAGCGG +
Preference number: 5 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRATMVAS*KELKKR
Trigger: CCGCTTCTTCAACTCCTTCAATGAGGCCACCATGGT...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CAA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCACAGCACAGAATGTACTaGCCAAGGCGGGCAAAGAGT +
Preference number: 5 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRAQHRMY*PRRAKS
Trigger: ACTCTTTGCCCGCCTTGGCAAGTACATTCTGTGCTG...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CAA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAAAACGGCTGATGTGCTaGGCCACGCCATTATTCTCC +
Preference number: 5 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRAKRLMC*ATPLFS
Trigger: GGAGAATAATGGCGTGGCCAAGCACATCAGCCGTTT...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CAA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAAACGGCTGATGTGCTaGGCCACGCCATTATTCTCC +
Preference number: 5 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGKRLMC*ATPLFS
Trigger: GGAGAATAATGGCGTGGCCAAGCACATCAGCCGTTT...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS-3UTR CAA 90 bp ACCATGGGGACAGGAGGTCACAGAACACACACACACACACACACACACACACACGAAGTTCCTTGGCTCTaGGAAGCTGGAGTGTTTAAA +
Preference number: 5 (lower is better)
Translates to: TMGTGGHRTHTHTHTHTHEVPWL*EAGVFK
Trigger: TTTAAACACTCCAGCTTCCAAGAGCCAAGGAACTTC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGTGACCTCCTGTCCCCATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS-3UTR CAA 90 bp TCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCAGCTGCTGACACCAGGTaGGAAGGGAAGATATTTCTG +
Preference number: 5 (lower is better)
Translates to: SIYPFLIIQCPKSTPSRAAADTR*EGKIFL
Trigger: CAGAAATATCTTCCCTTCCAACCTGGTGTCAGCAGC...TGCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594991.5
CDS-3UTR CAA 90 bp ATCCATTTATCCATTCCTCATAATCCAGTGTCCAAAGAGCACCCCCAGCAGGGCGCTGCTGACACCAGGTaGGAAGGGAAGATATTTACT +
Preference number: 5 (lower is better)
Translates to: IHLSIPHNPVSKEHPQQGAADTR*EGKIFT
Trigger: AGTAAATATCTTCCCTTCCAACCTGGTGTCAGCAGC...GCCCTGCTGGGGGTGCTCTTTGGACACTGGATTATGAGGAATGGATAAATGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412532.6
CDS CCA 72 bp AGGCGCCCAGACGGCCGAGCGCGCCGGGGTCCAGGCTaGCGGCGCCGCCGATCAAGCTGCACACCACCAGCG +
Preference number: 6 (lower is better)
Translates to: RRPDGRARRGPG*RRRRSSCTPPA
Trigger: CGCTGGTGGTGTGCAGCTTGATCGGCGGCGCCGCCAGCCTGGACCCCGGCGCGCTCGGCCGTCTGGGCGCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS GCA 72 bp ACGGAGGCGTTGATGGCGGCGGAGGCGGCGCCCGGCTaGAGAGCCAGCGCCAAGCCCACTCCGAGCGCCGAC +
Preference number: 6 (lower is better)
Translates to: TEALMAAEAAPG*RASAKPTPSAD
Trigger: GTCGGCGCTCGGAGTGGGCTTGGCGCTGGCTCTGCAGCCGGGCGCCGCCTCCGCCGCCATCAACGCCTCCGT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS GCA 72 bp GCGGCGCACCTGGTCCCGGGAACCGCAGTAGCCGCCTaGTGCCGCGCCTTGGTCCTCGATGGAGGCCAGCGC +
Preference number: 6 (lower is better)
Translates to: AAHLVPGTAVAA*CRALVLDGGQR
Trigger: GCGCTGGCCTCCATCGAGGACCAAGGCGCGGCAGCAGGCGGCTACTGCGGTTCCCGGGACCAGGTGCGCCGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS CCA 72 bp CCTCGATGGAGGCCAGCGCCAGGCCCCCGTTGGCGGTaGGCTCCGCCGCTGCGAGCCCCTTGGAGTCTCGAG +
Preference number: 6 (lower is better)
Translates to: PRWRPAPGPRWR*APPLRAPWSLE
Trigger: CTCGAGACTCCAAGGGGCTCGCAGCGGCGGAGCCCACCGCCAACGGGGGCCTGGCGCTGGCCTCCATCGAGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS CCA 72 bp CTTGGTCCTCGATGGAGGCCAGCGCCAGGCCCCCGTTaGCGGTGGGCTCCGCCGCTGCGAGCCCCTTGGAGT +
Preference number: 6 (lower is better)
Translates to: LGPRWRPAPGPR*RWAPPLRAPWS
Trigger: ACTCCAAGGGGCTCGCAGCGGCGGAGCCCACCGCCAACGGGGGCCTGGCGCTGGCCTCCATCGAGGACCAAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS CAA 90 bp AGCGCCAGGCCCCCGTTGGCGGTGGGCTCCGCCGCTGCGAGCCCCTaGGAGTCTCGAGGAGGATCGGCCACCATGATGGGAAGCACCGGG +
Preference number: 6 (lower is better)
Translates to: SARPPLAVGSAAASP*ESRGGSATMMGSTG
Trigger: CCCGGTGCTTCCCATCATGGTGGCCGATCCTCCTCGAGACTCCAAGGGGCTCGCAGCGGCGGAGCCCACCGCCAACGGGGGCCTGGCGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS CAA 72 bp CCCCCGTTGGCGGTGGGCTCCGCCGCTGCGAGCCCCTaGGAGTCTCGAGGAGGATCGGCCACCATGATGGGA +
Preference number: 6 (lower is better)
Translates to: PPLAVGSAAASP*ESRGGSATMMG
Trigger: TCCCATCATGGTGGCCGATCCTCCTCGAGACTCCAAGGGGCTCGCAGCGGCGGAGCCCACCGCCAACGGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS CCA 72 bp CCAGATGGCGGAGGTCTGCAGGAGGCTAGGTTCTGGTaGCGCAGATCCCGGACGCCTGGATCCGGGAGGCGG +
Preference number: 6 (lower is better)
Translates to: PDGGGLQEARFW*RRSRTPGSGRR
Trigger: CCGCCTCCCGGATCCAGGCGTCCGGGATCTGCGCCACCAGAACCTAGCCTCCTGCAGACCTCCGCCATCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS GCA 72 bp GGTGGGACGTGGGGCCCTTGGCTCCAGGAGGTTGAGTaGCCCCAGATGGCGGAGGTCTGCAGGAGGCTAGGT +
Preference number: 6 (lower is better)
Translates to: GGTWGPWLQEVE*PQMAEVCRRLG
Trigger: ACCTAGCCTCCTGCAGACCTCCGCCATCTGGGGGCACTCAACCTCCTGGAGCCAAGGGCCCCACGTCCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS CCA 72 bp GGAAACAGGGGACCCAGGCTCTTAGGTCCGGGAGGGTaGGATGCGGGCCCCTGTGTACGGAAGGCGGTGGTC +
Preference number: 6 (lower is better)
Translates to: GNRGPRLLGPGG*DAGPCVRKAVV
Trigger: GACCACCGCCTTCCGTACACAGGGGCCCGCATCCCACCCTCCCGGACCTAAGAGCCTGGGTCCCCTGTTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS CAA 72 bp GCGGCCACGCACTGGAAGAGCGCGGCACCGTCCATGTaGACGGTGGCGCCGATGGGCAGGATGAAACGGCTG +
Preference number: 6 (lower is better)
Translates to: AATHWKSAAPSM*TVAPMGRMKRL
Trigger: CAGCCGTTTCATCCTGCCCATCGGCGCCACCGTCAACATGGACGGTGCCGCGCTCTTCCAGTGCGTGGCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000593713.1
ENST00000594991.5
CDS CAA 90 bp CAGCCTCCTTCAGCCCCAAGAGGCTGGCGTGCTAGCCCTGAGGCATaGTGGGTTCGGGGTGAGGAATGCTGGCCTCCCACGGCAGGCCAG +
Preference number: 6 (lower is better)
Translates to: QPPSAPRGWRASPEA*WVRGEECWPPTAGQ
Trigger: CTGGCCTGCCGTGGGAGGCCAGCATTCCTCACCCCGAACCCACAATGCCTCAGGGCTAGCACGCCAGCCTCTTGGGGCTGAAGGAGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594991.5
CDS TCA 72 bp CGCCGCCGATCAAGCTGCACACCACCAGCGGCAAGATaGTCATCCGCAGCAGACGCAGCAGCAGCTCGCCCG +
Preference number: 6 (lower is better)
Translates to: RRRSSCTPPAAR*SSAADAAAARP
Trigger: CGGGCGAGCTGCTGCTGCGTCTGCTGCGGATGATCATCTTGCCGCTGGTGGTGTGCAGCTTGATCGGCGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS CCA 72 bp GCAGCGTGGCGGAACTGGAAGAGGTCCCAAAGGCAGTaGCCAGCGGCGTCACGATGCCCCACAGGAAGCGGT +
Preference number: 6 (lower is better)
Translates to: AAWRNWKRSQRQ*PAASRCPTGSG
Trigger: ACCGCTTCCTGTGGGGCATCGTGACGCCGCTGGCCACTGCCTTTGGGACCTCTTCCAGTTCCGCCACGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000593713.1
ENST00000594991.5
CDS CCA 72 bp GCCCCAAGAGGCTGGCGTGCTAGCCCTGAGGCATTGTaGGTTCGGGGTGAGGAATGCTGGCCTCCCACGGCA +
Preference number: 6 (lower is better)
Translates to: APRGWRASPEAL*VRGEECWPPTA
Trigger: TGCCGTGGGAGGCCAGCATTCCTCACCCCGAACCCACAATGCCTCAGGGCTAGCACGCCAGCCTCTTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594991.5
CDS GCA 72 bp GGGGGCCCGCCTGCACGCAAATACAGCCCCTACTCATaGCTCAGCCCGGCAGGGTTGGAACTAGGCTTGCAC +
Preference number: 6 (lower is better)
Translates to: GGPPARKYSPYS*LSPAGLELGLH
Trigger: GTGCAAGCCTAGTTCCAACCCTGCCGGGCTGAGGCATGAGTAGGGGCTGTATTTGCGTGCAGGCGGGCCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434726.6
ENST00000594991.5
CDS GCA 72 bp CTCCAGGAGGTTGAGTGCCCCCAGATGGCGGAGGTCTaGAGGAGGCTAGGTTCTGGTGGCGCAGATCCCGGA +
Preference number: 6 (lower is better)
Translates to: LQEVECPQMAEV*RRLGSGGADPG
Trigger: TCCGGGATCTGCGCCACCAGAACCTAGCCTCCTGCAGACCTCCGCCATCTGGGGGCACTCAACCTCCTGGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS CCA 72 bp TGGGTCTTGGACACTGAGGGCTGGGATGCCAGAATCTaGGGGCCGGGAAGCGGACCTCCGGAAACAGGGGAC +
Preference number: 6 (lower is better)
Translates to: WVLDTEGWDARI*GPGSGPPETGD
Trigger: GTCCCCTGTTTCCGGAGGTCCGCTTCCCGGCCCCCAGATTCTGGCATCCCAGCCCTCAGTGTCCAAGACCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS CCA 72 bp TCTCTGCTCTGCCCCGTGTGCCAGATGTCCGAAAGCTaGGAGTTCGGAGCGCCCGGGTTCCTTGGCCCTAGG +
Preference number: 6 (lower is better)
Translates to: SLLCPVCQMSES*EFGAPGFLGPR
Trigger: CCTAGGGCCAAGGAACCCGGGCGCTCCGAACTCCCAGCTTTCGGACATCTGGCACACGGGGCAGAGCAGAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS CCA 72 bp GATGGGAAGCACCGGGGTTTCTTAGCGCCTGGAAGCTaGCTGGGAGCGCTTGGGCTCCTTCCCAGGACCCGA +
Preference number: 6 (lower is better)
Translates to: DGKHRGFLAPGS*LGALGLLPRTR
Trigger: TCGGGTCCTGGGAAGGAGCCCAAGCGCTCCCAGCCAGCTTCCAGGCGCTAAGAAACCCCGGTGCTTCCCATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS CAA 72 bp TCAGCCCCAAGAGGCTGGCGTGCTAGCCCTGAGGCATaGTGGGTTCGGGGTGAGGAATGCTGGCCTCCCACG +
Preference number: 6 (lower is better)
Translates to: SAPRGWRASPEA*WVRGEECWPPT
Trigger: CGTGGGAGGCCAGCATTCCTCACCCCGAACCCACAATGCCTCAGGGCTAGCACGCCAGCCTCTTGGGGCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594991.5
CDS CCA 72 bp TGGGATGCGGGCCCCTGTGTACGGAAGGCGGTGGTCTaGTGTCCGGGAGTAGCGGTTACCAGCCAGAGAAAG +
Preference number: 6 (lower is better)
Translates to: WDAGPCVRKAVV*CPGVAVTSQRK
Trigger: CTTTCTCTGGCTGGTAACCGCTACTCCCGGACACCAGACCACCGCCTTCCGTACACAGGGGCCCGCATCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS CCA 72 bp GGAGCTGGGAATACGAGAGTTTCTCTGGGTGGGACGTaGGGCCCTTGGCTCCAGGAGGTTGAGTGCCCCCAG +
Preference number: 6 (lower is better)
Translates to: GAGNTRVSLGGT*GPWLQEVECPQ
Trigger: CTGGGGGCACTCAACCTCCTGGAGCCAAGGGCCCCACGTCCCACCCAGAGAAACTCTCGTATTCCCAGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS CCA 72 bp GAGTTCGGAGCGCCCGGGTTCCTTGGCCCTAGGAGCTaGGAATACGAGAGTTTCTCTGGGTGGGACGTGGGG +
Preference number: 6 (lower is better)
Translates to: EFGAPGFLGPRS*EYESFSGWDVG
Trigger: CCCCACGTCCCACCCAGAGAAACTCTCGTATTCCCAGCTCCTAGGGCCAAGGAACCCGGGCGCTCCGAACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS CCA 72 bp TCGCAAGATCCAGGAACGAATCGAGCACCTCCTTGCTaGGGGCATTTTCGGCACTGCCCGCGGCTCCCACGG +
Preference number: 6 (lower is better)
Translates to: SQDPGTNRAPPC*GHFRHCPRLPR
Trigger: CCGTGGGAGCCGCGGGCAGTGCCGAAAATGCCCCCAGCAAGGAGGTGCTCGATTCGTTCCTGGATCTTGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS CAA 90 bp ATGAACACTGCGGCCACGCACTGGAAGAGCGCGGCACCGTCCATGTaGACGGTGGCGCCGATGGGCAGGATGAAACGGCTGATGTGCTTG +
Preference number: 6 (lower is better)
Translates to: MNTAATHWKSAAPSM*TVAPMGRMKRLMCL
Trigger: CAAGCACATCAGCCGTTTCATCCTGCCCATCGGCGCCACCGTCAACATGGACGGTGCCGCGCTCTTCCAGTGCGTGGCCGCAGTGTTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000593713.1
ENST00000594991.5
CDS TCA 72 bp CAGGGCAGGGAAGGTCCCTCCCGGGGTTTACATGACTaGTTCCTTCTCAGAGGCGACCGTGGCATCCCCTGC +
Preference number: 6 (lower is better)
Translates to: QGREGPSRGLHD*FLLRGDRGIPC
Trigger: GCAGGGGATGCCACGGTCGCCTCTGAGAAGGAATCAGTCATGTAAACCCCGGGAGGGACCTTCCCTGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS TCA 72 bp CGAGCCCCTTGGAGTCTCGAGGAGGATCGGCCACCATaGTGGGAAGCACCGGGGTTTCTTAGCGCCTGGAAG +
Preference number: 6 (lower is better)
Translates to: RAPWSLEEDRPP*WEAPGFLSAWK
Trigger: CTTCCAGGCGCTAAGAAACCCCGGTGCTTCCCATCATGGTGGCCGATCCTCCTCGAGACTCCAAGGGGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS CCA 72 bp AATACGAGAGTTTCTCTGGGTGGGACGTGGGGCCCTTaGCTCCAGGAGGTTGAGTGCCCCCAGATGGCGGAG +
Preference number: 6 (lower is better)
Translates to: NTRVSLGGTWGP*LQEVECPQMAE
Trigger: CTCCGCCATCTGGGGGCACTCAACCTCCTGGAGCCAAGGGCCCCACGTCCCACCCAGAGAAACTCTCGTATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS CAA 90 bp TGTGCCAGATGTCCGAAAGCTGGGAGTTCGGAGCGCCCGGGTTCCTaGGCCCTAGGAGCTGGGAATACGAGAGTTTCTCTGGGTGGGACG +
Preference number: 6 (lower is better)
Translates to: CARCPKAGSSERPGS*ALGAGNTRVSLGGT
Trigger: CGTCCCACCCAGAGAAACTCTCGTATTCCCAGCTCCTAGGGCCAAGGAACCCGGGCGCTCCGAACTCCCAGCTTTCGGACATCTGGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS CAA 90 bp GGGAAGATATTTCTCGCAAGATCCAGGAACGAATCGAGCACCTCCTaGCTGGGGGCATTTTCGGCACTGCCCGCGGCTCCCACGGAGGCG +
Preference number: 6 (lower is better)
Translates to: GKIFLARSRNESSTS*LGAFSALPAAPTEA
Trigger: CGCCTCCGTGGGAGCCGCGGGCAGTGCCGAAAATGCCCCCAGCAAGGAGGTGCTCGATTCGTTCCTGGATCTTGCGAGAAATATCTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS TCA 72 bp GGAGGAGTCCTGCCCCCAGAGCGTCACCTTCTACATTaGGGACGGTACAGGACCGGTCGACTAGCCAGTCCA +
Preference number: 6 (lower is better)
Translates to: GGVLPPERHLLH*GRYRTGRLASP
Trigger: TGGACTGGCTAGTCGACCGGTCCTGTACCGTCCTCAATGTAGAAGGTGACGCTCTGGGGGCAGGACTCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS GCA 72 bp TTCTCGCAAGATCCAGGAACGAATCGAGCACCTCCTTaGTGGGGGCATTTTCGGCACTGCCCGCGGCTCCCA +
Preference number: 6 (lower is better)
Translates to: FSQDPGTNRAPP*WGHFRHCPRLP
Trigger: TGGGAGCCGCGGGCAGTGCCGAAAATGCCCCCAGCAAGGAGGTGCTCGATTCGTTCCTGGATCTTGCGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS CCA 72 bp GGCTCTTGGAAGCTGGAGTGTTTAAATTCCCCAGGCTaGGCGCTGAGGCTTCTCTGCTCTGCCCCGTGTGCC +
Preference number: 6 (lower is better)
Translates to: GSWKLECLNSPG*ALRLLCSAPCA
Trigger: GGCACACGGGGCAGAGCAGAGAAGCCTCAGCGCCCAGCCTGGGGAATTTAAACACTCCAGCTTCCAAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS CAA 72 bp TGGAGGAGTCCTGCCCCCAGAGCGTCACCTTCTACATaGAGGACGGTACAGGACCGGTCGACTAGCCAGTCC +
Preference number: 6 (lower is better)
Translates to: WRSPAPRASPST*RTVQDRSTSQS
Trigger: GGACTGGCTAGTCGACCGGTCCTGTACCGTCCTCAATGTAGAAGGTGACGCTCTGGGGGCAGGACTCCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS CAA 72 bp TACTCATGCCTCAGCCCGGCAGGGTTGGAACTAGGCTaGCACCCCTTTGCAGGACTTGGGGAGTCAGCCTCC +
Preference number: 6 (lower is better)
Translates to: YSCLSPAGLELG*HPFAGLGESAS
Trigger: GGAGGCTGACTCCCCAAGTCCTGCAAAGGGGTGCAAGCCTAGTTCCAACCCTGCCGGGCTGAGGCATGAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434726.6
ENST00000594991.5
CDS CAA 72 bp TTTCTCGCAAGATCCAGGAACGAATCGAGCACCTCCTaGCTGGGGGCATTTTCGGCACTGCCCGCGGCTCCC +
Preference number: 6 (lower is better)
Translates to: FLARSRNESSTS*LGAFSALPAAP
Trigger: GGGAGCCGCGGGCAGTGCCGAAAATGCCCCCAGCAAGGAGGTGCTCGATTCGTTCCTGGATCTTGCGAGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS GCA 72 bp ACGGTGGCGCCGATGGGCAGGATGAAACGGCTGATGTaGTTGGCCACGCCATTATTCTCCTCCACGCACTTC +
Preference number: 6 (lower is better)
Translates to: TVAPMGRMKRLM*LATPLFSSTHF
Trigger: GAAGTGCGTGGAGGAGAATAATGGCGTGGCCAAGCACATCAGCCGTTTCATCCTGCCCATCGGCGCCACCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000593713.1
ENST00000594991.5
CDS GCA 72 bp TGTTTAAATTCCCCAGGCTGGGCGCTGAGGCTTCTCTaGTCTGCCCCGTGTGCCAGATGTCCGAAAGCTGGG +
Preference number: 6 (lower is better)
Translates to: CLNSPGWALRLL*SAPCARCPKAG
Trigger: CCCAGCTTTCGGACATCTGGCACACGGGGCAGAGCAGAGAAGCCTCAGCGCCCAGCCTGGGGAATTTAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS CAA 90 bp GGGGCGTACCACATGATCCAGGAGACCAGAACCATGGTGGCCTCATaGAAGGAGTTGAAGAAGCGGATAAGCAGCTCCCCTTCAGGCCCC +
Preference number: 6 (lower is better)
Translates to: GAYHMIQETRTMVAS*KELKKRISSSPSGP
Trigger: GGGGCCTGAAGGGGAGCTGCTTATCCGCTTCTTCAACTCCTTCAATGAGGCCACCATGGTTCTGGTCTCCTGGATCATGTGGTACGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000593713.1
ENST00000594991.5
CDS CAA 90 bp TTGGAAGGGAAGATATTTCTCAGCCCGGCAGGGTTGGAACTAGGCTaGCACCCCTTTGCAGGACTTGGGGAGTCAGCCTCCTTCAGCCCC +
Preference number: 6 (lower is better)
Translates to: LEGKIFLSPAGLELG*HPFAGLGESASFSP
Trigger: GGGGCTGAAGGAGGCTGACTCCCCAAGTCCTGCAAAGGGGTGCAAGCCTAGTTCCAACCCTGCCGGGCTGAGAAATATCTTCCCTTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593713.1
CDS CCA 72 bp CATAGTGGGAGGGCAGCATTGTCTGAGAGGCTGGGTTaGCGTTTTAAGGCAGCGAGTGGAAGCTTTGGGGGC +
Preference number: 6 (lower is better)
Translates to: HSGRAALSERLG*RFKAASGSFGG
Trigger: GCCCCCAAAGCTTCCACTCGCTGCCTTAAAACGCCAACCCAGCCTCTCAGACAATGCTGCCCTCCCACTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434726.6
ENST00000594991.5
CDS CAA 72 bp GTGGCGCCGATGGGCAGGATGAAACGGCTGATGTGCTaGGCCACGCCATTATTCTCCTCCACGCACTTCATC +
Preference number: 6 (lower is better)
Translates to: VAPMGRMKRLMC*ATPLFSSTHFI
Trigger: GATGAAGTGCGTGGAGGAGAATAATGGCGTGGCCAAGCACATCAGCCGTTTCATCCTGCCCATCGGCGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000593713.1
ENST00000594991.5
CDS CAA 72 bp AAATACAGCCCCTACTCATGCCTCAGCCCGGCAGGGTaGGAACTAGGCTTGCACCCCTTTGCAGGACTTGGG +
Preference number: 6 (lower is better)
Translates to: KYSPYSCLSPAG*ELGLHPFAGLG
Trigger: CCCAAGTCCTGCAAAGGGGTGCAAGCCTAGTTCCAACCCTGCCGGGCTGAGGCATGAGTAGGGGCTGTATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434726.6
ENST00000594991.5
CDS CAA 90 bp CACATGATCCAGGAGACCAGAACCATGGTGGCCTCATTGAAGGAGTaGAAGAAGCGGATAAGCAGCTCCCCTTCAGGCCCCAGCTTCCGC +
Preference number: 6 (lower is better)
Translates to: HMIQETRTMVASLKE*KKRISSSPSGPSFR
Trigger: GCGGAAGCTGGGGCCTGAAGGGGAGCTGCTTATCCGCTTCTTCAACTCCTTCAATGAGGCCACCATGGTTCTGGTCTCCTGGATCATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000593713.1
ENST00000594991.5
CDS TCA 72 bp GCTCCTTCCCAGGACCCGACGTTCCTAGGACTGAGTTaGGTAACAGCACCTGGAGACTGGAACTTTGGAGGG +
Preference number: 6 (lower is better)
Translates to: APSQDPTFLGLS*VTAPGDWNFGG
Trigger: CCCTCCAAAGTTCCAGTCTCCAGGTGCTGTTACTCAACTCAGTCCTAGGAACGTCGGGTCCTGGGAAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS GCA 72 bp GGATGGCGTGACCCAGCAGGCAGCACAGAATGTACTTaGCAAGGCGGGCAAAGAGTAAACCCACATCCTCCA +
Preference number: 6 (lower is better)
Translates to: GWRDPAGSTECT*QGGQRVNPHPP
Trigger: TGGAGGATGTGGGTTTACTCTTTGCCCGCCTTGGCAAGTACATTCTGTGCTGCCTGCTGGGTCACGCCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000593713.1
ENST00000594991.5
CDS GCA 72 bp CAGGATCAAGGAGATATGGTCGACCGGGAGGTTGACTaGTTCGAGGATGATGGCCAGAGTGAGGACACCTCC +
Preference number: 6 (lower is better)
Translates to: QDQGDMVDREVD*FEDDGQSEDTS
Trigger: GGAGGTGTCCTCACTCTGGCCATCATCCTCGAAGCAGTCAACCTCCCGGTCGACCATATCTCCTTGATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS CAA 72 bp CAGGAGACCAGAACCATGGTGGCCTCATTGAAGGAGTaGAAGAAGCGGATAAGCAGCTCCCCTTCAGGCCCC +
Preference number: 6 (lower is better)
Translates to: QETRTMVASLKE*KKRISSSPSGP
Trigger: GGGGCCTGAAGGGGAGCTGCTTATCCGCTTCTTCAACTCCTTCAATGAGGCCACCATGGTTCTGGTCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000593713.1
ENST00000594991.5
CDS CAA 72 bp AAGATATTTCTCAGCCCGGCAGGGTTGGAACTAGGCTaGCACCCCTTTGCAGGACTTGGGGAGTCAGCCTCC +
Preference number: 6 (lower is better)
Translates to: KIFLSPAGLELG*HPFAGLGESAS
Trigger: GGAGGCTGACTCCCCAAGTCCTGCAAAGGGGTGCAAGCCTAGTTCCAACCCTGCCGGGCTGAGAAATATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593713.1
CDS CAA 90 bp CAACTCAGGCTCTGTGCTTCTCGACTCCGTACGGTCCACGTAATTTaGGAGGAGTCCTGCCCCCAGAGCGTCACCTTCTACATTGAGGAC +
Preference number: 6 (lower is better)
Translates to: QLRLCASRLRTVHVI*EESCPQSVTFYIED
Trigger: GTCCTCAATGTAGAAGGTGACGCTCTGGGGGCAGGACTCCTCCAAAATTACGTGGACCGTACGGAGTCGAGAAGCACAGAGCCTGAGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS CCA 72 bp TCGACTAGCCAGTCCACAGCCAGGATCAAGGAGATATaGTCGACCGGGAGGTTGACTGCTTCGAGGATGATG +
Preference number: 6 (lower is better)
Translates to: STSQSTARIKEI*STGRLTASRMM
Trigger: CATCATCCTCGAAGCAGTCAACCTCCCGGTCGACCATATCTCCTTGATCCTGGCTGTGGACTGGCTAGTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS CAA 72 bp ACAGCCAGGATCAAGGAGATATGGTCGACCGGGAGGTaGACTGCTTCGAGGATGATGGCCAGAGTGAGGACA +
Preference number: 6 (lower is better)
Translates to: TARIKEIWSTGR*TASRMMARVRT
Trigger: TGTCCTCACTCTGGCCATCATCCTCGAAGCAGTCAACCTCCCGGTCGACCATATCTCCTTGATCCTGGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5
CDS CAA 72 bp AGGTTGGAAGGGAAGATATTTCTCAGCCCGGCAGGGTaGGAACTAGGCTTGCACCCCTTTGCAGGACTTGGG +
Preference number: 6 (lower is better)
Translates to: RLEGKIFLSPAG*ELGLHPFAGLG
Trigger: CCCAAGTCCTGCAAAGGGGTGCAAGCCTAGTTCCAACCCTGCCGGGCTGAGAAATATCTTCCCTTCCAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593713.1
CDS CAA 72 bp CACATGATCCAGGAGACCAGAACCATGGTGGCCTCATaGAAGGAGTTGAAGAAGCGGATAAGCAGCTCCCCT +
Preference number: 6 (lower is better)
Translates to: HMIQETRTMVAS*KELKKRISSSP
Trigger: AGGGGAGCTGCTTATCCGCTTCTTCAACTCCTTCAATGAGGCCACCATGGTTCTGGTCTCCTGGATCATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000593713.1
ENST00000594991.5
CDS CAA 72 bp TTCATAGGTGGTAGAGTACATAGTGGGAGGGCAGCATaGTCTGAGAGGCTGGGTTGGCGTTTTAAGGCAGCG +
Preference number: 6 (lower is better)
Translates to: FIGGRVHSGRAA*SERLGWRFKAA
Trigger: CGCTGCCTTAAAACGCCAACCCAGCCTCTCAGACAATGCTGCCCTCCCACTATGTACTCTACCACCTATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434726.6
CDS CAA 72 bp CAGAGGGTTATTAGATACCATAGTGGGAGGGCAGCATaGTCTGAGAGGCTGGGTTGGCGTTTTAAGGCAGCG +
Preference number: 6 (lower is better)
Translates to: QRVIRYHSGRAA*SERLGWRFKAA
Trigger: CGCTGCCTTAAAACGCCAACCCAGCCTCTCAGACAATGCTGCCCTCCCACTATGGTATCTAATAACCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594991.5
CDS CAA 90 bp ACAGACACACAGAGGGTTATTAGATACCATAGTGGGAGGGCAGCATaGTCTGAGAGGCTGGGTTGGCGTTTTAAGGCAGCGAGTGGAAGC +
Preference number: 6 (lower is better)
Translates to: TDTQRVIRYHSGRAA*SERLGWRFKAASGS
Trigger: GCTTCCACTCGCTGCCTTAAAACGCCAACCCAGCCTCTCAGACAATGCTGCCCTCCCACTATGGTATCTAATAACCCTCTGTGTGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594991.5
CDS CCA 72 bp ACCAGGTTGGAAGGGAAGATATTTACTCCCGAGGGCTaGAGCCTCCCCTCAATATCCTGTCGAGTTTTCCTA +
Preference number: 6 (lower is better)
Translates to: TRLEGKIFTPEG*SLPSISCRVFL
Trigger: TAGGAAAACTCGACAGGATATTGAGGGGAGGCTCCAGCCCTCGGGAGTAAATATCTTCCCTTCCAACCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412532.6
CDS CCA 72 bp AGTTGTGAGTTCACAGCACTGAAGTTCCTTGGCTCTTaGAAGCTGGAGTGTTTAAATTCCCCAGGCTGGGCG +
Preference number: 6 (lower is better)
Translates to: SCEFTALKFLGS*KLECLNSPGWA
Trigger: CGCCCAGCCTGGGGAATTTAAACACTCCAGCTTCCAAGAGCCAAGGAACTTCAGTGCTGTGAACTCACAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS TCA 72 bp CTGGAGACTGGAACTTTGGAGGGCTCCTTAGAGTTGTaGGTTCACAGCACTGAAGTTCCTTGGCTCTTGGAA +
Preference number: 6 (lower is better)
Translates to: LETGTLEGSLEL*VHSTEVPWLLE
Trigger: TTCCAAGAGCCAAGGAACTTCAGTGCTGTGAACTCACAACTCTAAGGAGCCCTCCAAAGTTCCAGTCTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542575.6
CDS GCA 72 bp GCAGCTCACTCTTCACTTGTATCAACTCAGGCTCTGTaGTTCTCGACTCCGTACGGTCCACGTAATTTTGGA +
Preference number: 6 (lower is better)
Translates to: AAHSSLVSTQAL*FSTPYGPRNFG
Trigger: TCCAAAATTACGTGGACCGTACGGAGTCGAGAAGCACAGAGCCTGAGTTGATACAAGTGAAGAGTGAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412532.6
ENST00000434726.6
ENST00000542575.6
ENST00000594991.5