RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC17A9 (Homo sapiens)

Ensembl gene IDs: ENSG00000101194

Ensembl transcript IDs: ENST00000370349.7, ENST00000370351.9, ENST00000411611.1, ENST00000459704.6, ENST00000483113.1, ENST00000487303.1, ENST00000488738.5

Found 440 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCTGGTGCCAGCCTCACATTGGCAGGCGGGCGCTGCAGGAGGCTTaGGGAGAACACGGCGACCGAGGGAGGTTTGGCGGGAACCACGCG +
Preference number: 1 (lower is better)
Translates to: AWCQPHIGRRALQEA*GEHGDRGRFGGNHA
Trigger: CGCGTGGTTCCCGCCAAACCTCCCTCGGTCGCCGTGTTCTCCGCAAGCCTCCTGCAGCGCCCGCCTGCCAATGTGAGGCTGGCACCAGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR GCA 90 bp GGGAGGCTGCAGCCTGGTGCCAGCCTCACATTGGCAGGCGGGCGCTaGAGGAGGCTTGCGGAGAACACGGCGACCGAGGGAGGTTTGGCG +
Preference number: 1 (lower is better)
Translates to: GRLQPGASLTLAGGR*RRLAENTATEGGLA
Trigger: CGCCAAACCTCCCTCGGTCGCCGTGTTCTCCGCAAGCCTCCTGCAGCGCCCGCCTGCCAATGTGAGGCTGGCACCAGGCTGCAGCCTCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR CCA 90 bp ATCACCAGGCCTGGGAAAGCCATGCGGGTTCGAGAGCCTGCGCCATaGCCATGCTGGGCAGGGCCCAAGGGGTGCCCAGGCGTCTGCCCA +
Preference number: 1 (lower is better)
Translates to: ITRPGKAMRVREPAP*PCWAGPKGCPGVCP
Trigger: TGGGCAGACGCCTGGGCACCCCTTGGGCCCTGCCCAGCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTCCCAGGCCTGGTGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR GCA 90 bp GCGCCATGGCCATGCTGGGCAGGGCCCAAGGGGTGCCCAGGCGTCTaGCCACTGAGAACACTGTTAGTGCGGAGGGATCCACAGGAGGGG +
Preference number: 1 (lower is better)
Translates to: APWPCWAGPKGCPGV*PLRTLLVRRDPQEG
Trigger: CCCCTCCTGTGGATCCCTCCGCACTAACAGTGTTCTCAGTGGGCAGACGCCTGGGCACCCCTTGGGCCCTGCCCAGCATGGCCATGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR CCA 90 bp CCTGGGAAAGCCATGCGGGTTCGAGAGCCTGCGCCATGGCCATGCTaGGCAGGGCCCAAGGGGTGCCCAGGCGTCTGCCCACTGAGAACA +
Preference number: 1 (lower is better)
Translates to: PGKAMRVREPAPWPC*AGPKGCPGVCPLRT
Trigger: TGTTCTCAGTGGGCAGACGCCTGGGCACCCCTTGGGCCCTGCCCAGCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR GCA 90 bp ACAGCCCGCCAGAGACACAGCAAAGTGGGCTGGGATTGGGGAGGCTaGAGCCTGGTGCCAGCCTCACATTGGCAGGCGGGCGCTGCAGGA +
Preference number: 1 (lower is better)
Translates to: TARQRHSKVGWDWGG*SLVPASHWQAGAAG
Trigger: TCCTGCAGCGCCCGCCTGCCAATGTGAGGCTGGCACCAGGCTGCAGCCTCCCCAATCCCAGCCCACTTTGCTGTGTCTCTGGCGGGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR GCA 90 bp GCCAACCGTCCCTGGAGAGCAGAATCACCAGGCCTGGGAAAGCCATaGGGGTTCGAGAGCCTGCGCCATGGCCATGCTGGGCAGGGCCCA +
Preference number: 1 (lower is better)
Translates to: ANRPWRAESPGLGKP*GFESLRHGHAGQGP
Trigger: TGGGCCCTGCCCAGCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTCCCAGGCCTGGTGATTCTGCTCTCCAGGGACGGTTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR CCA 90 bp GGCGCTGCAGGAGGCTTGCGGAGAACACGGCGACCGAGGGAGGTTTaGCGGGAACCACGCGGAACAGATCGTGGTGGGAATGAGGCTGCG +
Preference number: 1 (lower is better)
Translates to: GAAGGLRRTRRPREV*REPRGTDRGGNEAA
Trigger: CGCAGCCTCATTCCCACCACGATCTGTTCCGCGTGGTTCCCGCCAAACCTCCCTCGGTCGCCGTGTTCTCCGCAAGCCTCCTGCAGCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR GCA 90 bp GTTCGAGAGCCTGCGCCATGGCCATGCTGGGCAGGGCCCAAGGGGTaGCCAGGCGTCTGCCCACTGAGAACACTGTTAGTGCGGAGGGAT +
Preference number: 1 (lower is better)
Translates to: VREPAPWPCWAGPKG*PGVCPLRTLLVRRD
Trigger: ATCCCTCCGCACTAACAGTGTTCTCAGTGGGCAGACGCCTGGGCACCCCTTGGGCCCTGCCCAGCATGGCCATGGCGCAGGCTCTCGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR GCA 90 bp TCCTGGCCTCCAGACAGCAACTGCCAGGCTTCTGGAAGCCCCTCCTaGCCCAAGACCCCACAGCAGCGTCCAGCAGTCCAGCAGGACCGT +
Preference number: 1 (lower is better)
Translates to: SWPPDSNCQASGSPS*PKTPQQRPAVQQDR
Trigger: ACGGTCCTGCTGGACTGCTGGACGCTGCTGTGGGGTCTTGGGGCAGGAGGGGCTTCCAGAAGCCTGGCAGTTGCTGTCTGGAGGCCAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR TCA 90 bp AGCGTCCAGCAGTCCAGCAGGACCGTCCCGAAGCCTCTGTGGGGGTaGTGCTCTAGGCTGTACCCATGGTGCCACAGGGTTGGGCTGACC +
Preference number: 1 (lower is better)
Translates to: SVQQSSRTVPKPLWG*CSRLYPWCHRVGLT
Trigger: GGTCAGCCCAACCCTGTGGCACCATGGGTACAGCCTAGAGCATCACCCCCACAGAGGCTTCGGGACGGTCCTGCTGGACTGCTGGACGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR GCA 90 bp GGGTCCCGGACACAGGCAAGGGTCTCTAGCCCGCCACCCACCCACTaGCCTGGGGGTCTCTGTCAGGCTTCTAGGAGACACAGAGACTCT +
Preference number: 1 (lower is better)
Translates to: GSRTQARVSSPPPTH*PGGLCQASRRHRDS
Trigger: AGAGTCTCTGTGTCTCCTAGAAGCCTGACAGAGACCCCCAGGGCAGTGGGTGGGTGGCGGGCTAGAGACCCTTGCCTGTGTCCGGGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR CCA 90 bp CCGAGGAAGGTGCCAACCGTCCCTGGAGAGCAGAATCACCAGGCCTaGGAAAGCCATGCGGGTTCGAGAGCCTGCGCCATGGCCATGCTG +
Preference number: 1 (lower is better)
Translates to: PRKVPTVPGEQNHQA*ESHAGSRACAMAML
Trigger: CAGCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTCCCAGGCCTGGTGATTCTGCTCTCCAGGGACGGTTGGCACCTTCCTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR CCA 90 bp CAACGCACAGGCCCCACCTCTGAACTCAGCCGCAGGTGGGCTTCCTaGGCTTGGCTTCCTGGCCTCCAGACAGCAACTGCCAGGCTTCTG +
Preference number: 1 (lower is better)
Translates to: QRTGPTSELSRRWAS*AWLPGLQTATARLL
Trigger: CAGAAGCCTGGCAGTTGCTGTCTGGAGGCCAGGAAGCCAAGCCCAGGAAGCCCACCTGCGGCTGAGTTCAGAGGTGGGGCCTGTGCGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR CCA 90 bp GAGGGTGGCTACCTGGGGAGGCTGGGCAGAGTCTGGAGACATTTCTaGCTGTTGTCTGACTGGGAGCTGCTGGCTAGGGGTGGGTGGAGG +
Preference number: 1 (lower is better)
Translates to: EGGYLGRLGRVWRHF*LLSDWELLARGGWR
Trigger: CCTCCACCCACCCCTAGCCAGCAGCTCCCAGTCAGACAACAGCCAGAAATGTCTCCAGACTCTGCCCAGCCTCCCCAGGTAGCCACCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR CCA 90 bp GGACCCCTGGCGGCAAAGGAACCCCGAAACCCAGCCTGGCTCTGCTaGCATGCTCATTTCAACACTCCCGGCCTAGGAGTCCGTTCCTGG +
Preference number: 1 (lower is better)
Translates to: GPLAAKEPRNPAWLC*HAHFNTPGLGVRSW
Trigger: CCAGGAACGGACTCCTAGGCCGGGAGTGTTGAAATGAGCATGCCAGCAGAGCCAGGCTGGGTTTCGGGGTTCCTTTGCCGCCAGGGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR GCA 90 bp CCTGGCGGCAAAGGAACCCCGAAACCCAGCCTGGCTCTGCTGGCATaGTCATTTCAACACTCCCGGCCTAGGAGTCCGTTCCTGGGATTC +
Preference number: 1 (lower is better)
Translates to: PGGKGTPKPSLALLA*SFQHSRPRSPFLGF
Trigger: GAATCCCAGGAACGGACTCCTAGGCCGGGAGTGTTGAAATGAGCATGCCAGCAGAGCCAGGCTGGGTTTCGGGGTTCCTTTGCCGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR CCA 90 bp AGGTCGTGTCTCGAGGGTGGCTACCTGGGGAGGCTGGGCAGAGTCTaGAGACATTTCTGGCTGTTGTCTGACTGGGAGCTGCTGGCTAGG +
Preference number: 1 (lower is better)
Translates to: RSCLEGGYLGRLGRV*RHFWLLSDWELLAR
Trigger: CCTAGCCAGCAGCTCCCAGTCAGACAACAGCCAGAAATGTCTCCAGACTCTGCCCAGCCTCCCCAGGTAGCCACCCTCGAGACACGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR CCA 90 bp CAGGCTTCTAGGAGACACAGAGACTCTGAGGTCGTGTCTCGAGGGTaGCTACCTGGGGAGGCTGGGCAGAGTCTGGAGACATTTCTGGCT +
Preference number: 1 (lower is better)
Translates to: QASRRHRDSEVVSRG*LPGEAGQSLETFLA
Trigger: AGCCAGAAATGTCTCCAGACTCTGCCCAGCCTCCCCAGGTAGCCACCCTCGAGACACGACCTCAGAGTCTCTGTGTCTCCTAGAAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR CCA 90 bp AGGCTCCACAGTGGTTTGTGTTCCTCTCTGCTCGTGTGTCTGACATaGAGTGACCAAGTCCCACACACTGAGTCCCCTGTGTCCTGGGGC +
Preference number: 1 (lower is better)
Translates to: RLHSGLCSSLLVCLT*SDQVPHTESPVSWG
Trigger: GCCCCAGGACACAGGGGACTCAGTGTGTGGGACTTGGTCACTCCATGTCAGACACACGAGCAGAGAGGAACACAAACCACTGTGGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR CCA 90 bp CATTTCTGGCTGTTGTCTGACTGGGAGCTGCTGGCTAGGGGTGGGTaGAGGCCAGGGATACCTTTAAGCATCCTACAGTGTGCAGGACAG +
Preference number: 1 (lower is better)
Translates to: HFWLLSDWELLARGG*RPGIPLSILQCAGQ
Trigger: CTGTCCTGCACACTGTAGGATGCTTAAAGGTATCCCTGGCCTCCACCCACCCCTAGCCAGCAGCTCCCAGTCAGACAACAGCCAGAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR TCA 90 bp GCTTCAGGCTCCACAGTGGTTTGTGTTCCTCTCTGCTCGTGTGTCTaGCATGGAGTGACCAAGTCCCACACACTGAGTCCCCTGTGTCCT +
Preference number: 1 (lower is better)
Translates to: ASGSTVVCVPLCSCV*HGVTKSHTLSPLCP
Trigger: AGGACACAGGGGACTCAGTGTGTGGGACTTGGTCACTCCATGTCAGACACACGAGCAGAGAGGAACACAAACCACTGTGGAGCCTGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR GCA 90 bp AGGGTTGGGCTGACCGAAACTGGAGAGATTGTAGGGGAACATTTGTaGTCAAGTGCAAAACTCCACTTTGTCTTTCCACAGCACAGCTGG +
Preference number: 1 (lower is better)
Translates to: RVGLTETGEIVGEHL*SSAKLHFVFPQHSW
Trigger: CCAGCTGTGCTGTGGAAAGACAAAGTGGAGTTTTGCACTTGAGCACAAATGTTCCCCTACAATCTCTCCAGTTTCGGTCAGCCCAACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR-3UTR TCA 90 bp TGCGGAGGGATCCACAGGAGGGGAGAGCGGCGCCAGGGTCCCGGACACAGGCAAGGCCACACCAGCCTGTaGGGAGGACAGGGCCGAGCC +
Preference number: 2 (lower is better)
Translates to: CGGIHRRGERRQGPGHRQGHTSL*GGQGRA
Trigger: GGCTCGGCCCTGTCCTCCTCACAGGCTGGTGTGGCC...TTGCCTGTGTCCGGGACCCTGGCGCCGCTCTCCCCTCCTGTGGATCCCTCCGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR GCA 90 bp TGCGGAGGGATCCACAGGAGGGGAGAGCGGCGCCAGGGTCCCGGACACAGGCAACCTGTGTCCTGGGGCTaGTGGCGCCTGGGTCCTTGG +
Preference number: 2 (lower is better)
Translates to: CGGIHRRGERRQGPGHRQPVSWG*WRLGPW
Trigger: CCAAGGACCCAGGCGCCAGCAGCCCCAGGACACAGG...TTGCCTGTGTCCGGGACCCTGGCGCCGCTCTCCCCTCCTGTGGATCCCTCCGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR CAA 90 bp AGCCTGGTGCCAGCCTCACATTGGCAGGCGGGCGCTGCAGGAGGCTaGCGGAGAACACGGCGACCGAGGGAGGTTTGGCGGGAACCACGC +
Preference number: 2 (lower is better)
Translates to: SLVPASHWQAGAAGG*RRTRRPREVWREPR
Trigger: GCGTGGTTCCCGCCAAACCTCCCTCGGTCGCCGTGTTCTCCGCAAGCCTCCTGCAGCGCCCGCCTGCCAATGTGAGGCTGGCACCAGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR CCA 90 bp CGCTGCAGGAGGCTTGCGGAGAACACGGCGACCGAGGGAGGTTTGGCGGGAACCGGGGCTGCTGGCGCCTaGGTCCTTGGAGAGGCTGTG +
Preference number: 2 (lower is better)
Translates to: RCRRLAENTATEGGLAGTGAAGA*VLGEAV
Trigger: CACAGCCTCTCCAAGGACCCAGGCGCCAGCAGCCCC...GGTTCCCGCCAAACCTCCCTCGGTCGCCGTGTTCTCCGCAAGCCTCCTGCAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR CCA 90 bp TGCGGAGGGATCCACAGGAGGGGAGAGCGGCGCCAGGGTCCCGGACACAGGCAACTGACTGGGAGCTGCTaGCTAGGGGTGGGTGGAGGC +
Preference number: 2 (lower is better)
Translates to: CGGIHRRGERRQGPGHRQLTGSC*LGVGGG
Trigger: GCCTCCACCCACCCCTAGCCAGCAGCTCCCAGTCAG...TTGCCTGTGTCCGGGACCCTGGCGCCGCTCTCCCCTCCTGTGGATCCCTCCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR GCA 90 bp ATCACCAGGCCTGGGAAAGCCATGCGGGTTCGAGAGCCTGCGCCATGGCCATGCGCAGGGCCCAAGGGGTaGCCAGGCGTCTGCCCACTG +
Preference number: 2 (lower is better)
Translates to: ITRPGKAMRVREPAPWPCAGPKG*PGVCPL
Trigger: CAGTGGGCAGACGCCTGGGCACCCCTTGGGCCCTGC...GCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTCCCAGGCCTGGTGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR GCA 90 bp CTGGGCTTGGCTTCCTGGCCTCCAGACAGCAACTGCCAGGCTTCTGGAAGCCCCCCTGCGCCATGGCCATaGTGGGCAGGGCCCAAGGGG +
Preference number: 2 (lower is better)
Translates to: LGLASWPPDSNCQASGSPPAPWP*WAGPKG
Trigger: CCCCTTGGGCCCTGCCCAGCATGGCCATGGCGCAGG...GGGGCTTCCAGAAGCCTGGCAGTTGCTGTCTGGAGGCCAGGAAGCCAAGCCCAG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR-3UTR GCA 90 bp GAAAGCCATGCGGGTTCGAGAGCCTGCGCCATGGCCATGCTGGGCAGGGCCCAAGCGCTGCAGGAGGCTTaGGGAGAACACGGCGACCGA +
Preference number: 2 (lower is better)
Translates to: ESHAGSRACAMAMLGRAQALQEA*GEHGDR
Trigger: TCGGTCGCCGTGTTCTCCGCAAGCCTCCTGCAGCGC...TTGGGCCCTGCCCAGCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR CCA 90 bp CCCACTGAGAACACTGTTAGTGCGGAGGGATCCACAGGAGGGGAGAGCGGCGCCGGGGCTGCTGGCGCCTaGGTCCTTGGAGAGGCTGTG +
Preference number: 2 (lower is better)
Translates to: PTENTVSAEGSTGGESGAGAAGA*VLGEAV
Trigger: CACAGCCTCTCCAAGGACCCAGGCGCCAGCAGCCCC...GGCGCCGCTCTCCCCTCCTGTGGATCCCTCCGCACTAACAGTGTTCTCAGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR CCA 90 bp AGACCCCACAGCAGCGTCCAGCAGTCCAGCAGGACCGTCCCGAAGCCTCTGTGGAGAGAGCAGCGAGCCTaGTCTGGACCCAGGCCCACC +
Preference number: 2 (lower is better)
Translates to: RPHSSVQQSSRTVPKPLWREQRA*SGPRPT
Trigger: GGTGGGCCTGGGTCCAGACCAGGCTCGCTGCTCTCT...CCACAGAGGCTTCGGGACGGTCCTGCTGGACTGCTGGACGCTGCTGTGGGGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR-3UTR CCA 90 bp GGTAGAAAGAACGCCAGAAAGGTGGGTCTGTGTGTTCTGGGGTGCGTGGGGCCCGCAGCGAGCCTGGTCTaGACCCAGGCCCACCCCACC +
Preference number: 2 (lower is better)
Translates to: GRKNARKVGLCVLGCVGPAASLV*TQAHPT
Trigger: GGTGGGGTGGGCCTGGGTCCAGACCAGGCTCGCTGC...GGGCCCCACGCACCCCAGAACACACAGACCCACCTTTCTGGCGTTCTTTCTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR CCA 90 bp TGCGGAGGGATCCACAGGAGGGGAGAGCGGCGCCAGGGTCCCGGACACAGGCAACTGGCTAGGGGTGGGTaGAGGCCAGGGATACCTTTA +
Preference number: 2 (lower is better)
Translates to: CGGIHRRGERRQGPGHRQLARGG*RPGIPL
Trigger: TAAAGGTATCCCTGGCCTCCACCCACCCCTAGCCAG...TTGCCTGTGTCCGGGACCCTGGCGCCGCTCTCCCCTCCTGTGGATCCCTCCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR CAA 90 bp GGCTACCTGGGGAGGCTGGGCAGAGTCTGGAGACATTTCTGGCTGTaGTCTGACTGGGAGCTGCTGGCTAGGGGTGGGTGGAGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: GYLGRLGRVWRHFWL*SDWELLARGGWRPG
Trigger: CCCTGGCCTCCACCCACCCCTAGCCAGCAGCTCCCAGTCAGACAACAGCCAGAAATGTCTCCAGACTCTGCCCAGCCTCCCCAGGTAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR GCA 90 bp TCACCAGGCCTGGGAAAGCCATGCGGGTTCGAGAGCCTGCGCCATGGCCATGCTTGGGATTGGGGAGGCTaGAGCCTGGTGCCAGCCTCA +
Preference number: 2 (lower is better)
Translates to: SPGLGKPCGFESLRHGHAWDWGG*SLVPAS
Trigger: TGAGGCTGGCACCAGGCTGCAGCCTCCCCAATCCCA...AGCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTCCCAGGCCTGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR CCA 90 bp TCACCAGGCCTGGGAAAGCCATGCGGGTTCGAGAGCCTGCGCCATGGCCATGCTCGACCGAGGGAGGTTTaGCGGGAACCACGCGGAACA +
Preference number: 2 (lower is better)
Translates to: SPGLGKPCGFESLRHGHARPREV*REPRGT
Trigger: TGTTCCGCGTGGTTCCCGCCAAACCTCCCTCGGTCG...AGCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTCCCAGGCCTGGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR CCA 90 bp GGTAGAAAGAACGCCAGAAAGGTGGGTCTGTGTGTTCTGGGGTGCGTGGGGCCCAGAGAGCAGCGAGCCTaGTCTGGACCCAGGCCCACC +
Preference number: 2 (lower is better)
Translates to: GRKNARKVGLCVLGCVGPREQRA*SGPRPT
Trigger: GGTGGGCCTGGGTCCAGACCAGGCTCGCTGCTCTCT...GGGCCCCACGCACCCCAGAACACACAGACCCACCTTTCTGGCGTTCTTTCTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR CCA 90 bp CGTCTGCCCACTGAGAACACTGTTAGTGCGGAGGGATCCACAGGAGGGGAGAGCGTCGTGTCTCGAGGGTaGCTACCTGGGGAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: RLPTENTVSAEGSTGGESVVSRG*LPGEAG
Trigger: CCCAGCCTCCCCAGGTAGCCACCCTCGAGACACGAC...GCTCTCCCCTCCTGTGGATCCCTCCGCACTAACAGTGTTCTCAGTGGGCAGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR CCA 90 bp GGACAGCTGATAGCAGGGTACATCGCTGTCATCTGTGGACACGCAGGACCCCTGTGGGTCTGTGTGTTCTaGGGTGCGTGGGGCCCGCCC +
Preference number: 2 (lower is better)
Translates to: GQLIAGYIAVICGHAGPLWVCVF*GAWGPP
Trigger: GGGCGGGCCCCACGCACCCCAGAACACACAGACCCA...CAGGGGTCCTGCGTGTCCACAGATGACAGCGATGTACCCTGCTATCAGCTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR-3UTR GCA 90 bp TTGTCTGACTGGGAGCTGCTGGCTAGGGGTGGGTGGAGGCCAGGGATACCTTTATTGGCAGGCGGGCGCTaGAGGAGGCTTGCGGAGAAC +
Preference number: 2 (lower is better)
Translates to: LSDWELLARGGWRPGIPLLAGGR*RRLAEN
Trigger: GTTCTCCGCAAGCCTCCTGCAGCGCCCGCCTGCCAA...TAAAGGTATCCCTGGCCTCCACCCACCCCTAGCCAGCAGCTCCCAGTCAGACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR GCA 90 bp TCACCAGGCCTGGGAAAGCCATGCGGGTTCGAGAGCCTGCGCCATGGCCATGCTGGGTGCCCAGGCGTCTaGCCACTGAGAACACTGTTA +
Preference number: 2 (lower is better)
Translates to: SPGLGKPCGFESLRHGHAGCPGV*PLRTLL
Trigger: TAACAGTGTTCTCAGTGGGCAGACGCCTGGGCACCC...AGCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTCCCAGGCCTGGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR GCA 90 bp GGACCGTCCCGAAGCCTCTGTGGGGGTGATGCTCTAGGCTGTACCCATGGTGCCGGGTGCCCAGGCGTCTaGCCACTGAGAACACTGTTA +
Preference number: 2 (lower is better)
Translates to: GPSRSLCGGDALGCTHGAGCPGV*PLRTLL
Trigger: TAACAGTGTTCTCAGTGGGCAGACGCCTGGGCACCC...GGCACCATGGGTACAGCCTAGAGCATCACCCCCACAGAGGCTTCGGGACGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR-3UTR CCA 90 bp TTAAGCATCCTACAGTGTGCAGGACAGCTCCCACCAAGGAGGACAGCCCGCCAGTGGCGCCTGGGTCCTTaGAGAGGCTGTGGGGTTGGG +
Preference number: 2 (lower is better)
Translates to: LSILQCAGQLPPRRTARQWRLGP*RGCGVG
Trigger: CCCAACCCCACAGCCTCTCCAAGGACCCAGGCGCCA...CTGGCGGGCTGTCCTCCTTGGTGGGAGCTGTCCTGCACACTGTAGGATGCTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR CCA 90 bp GGTAGAAAGAACGCCAGAAAGGTGGGTCTGTGTGTTCTGGGGTGCGTGGGGCCCACCCACCCACTGCCCTaGGGGTCTCTGTCAGGCTTC +
Preference number: 2 (lower is better)
Translates to: GRKNARKVGLCVLGCVGPTHPLP*GSLSGF
Trigger: GAAGCCTGACAGAGACCCCCAGGGCAGTGGGTGGGT...GGGCCCCACGCACCCCAGAACACACAGACCCACCTTTCTGGCGTTCTTTCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR TCA 90 bp TTGTCTGACTGGGAGCTGCTGGCTAGGGGTGGGTGGAGGCCAGGGATACCTTTACCAAGTCCCACACACTaGGTCCCCTGTGTCCTGGGG +
Preference number: 2 (lower is better)
Translates to: LSDWELLARGGWRPGIPLPSPTH*VPCVLG
Trigger: CCCCAGGACACAGGGGACTCAGTGTGTGGGACTTGG...TAAAGGTATCCCTGGCCTCCACCCACCCCTAGCCAGCAGCTCCCAGTCAGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR GCA 90 bp GGCACTGGTCCCAGAGCAGCCACACTTACGGTCGAGACACAAAGTGGAATGGGGTCTGGAAGCCCCTCCTaGCCCAAGACCCCACAGCAG +
Preference number: 2 (lower is better)
Translates to: GTGPRAATLTVETQSGMGSGSPS*PKTPQQ
Trigger: CTGCTGTGGGGTCTTGGGGCAGGAGGGGCTTCCAGA...CCCCATTCCACTTTGTGTCTCGACCGTAAGTGTGGCTGCTCTGGGACCAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR-3UTR CCA 90 bp GATACCTTTAAGCATCCTACAGTGTGCAGGACAGCTCCCACCAAGGAGGACAGCGCAGCGAGCCTGGTCTaGACCCAGGCCCACCCCACC +
Preference number: 2 (lower is better)
Translates to: DTFKHPTVCRTAPTKEDSAASLV*TQAHPT
Trigger: GGTGGGGTGGGCCTGGGTCCAGACCAGGCTCGCTGC...GCTGTCCTCCTTGGTGGGAGCTGTCCTGCACACTGTAGGATGCTTAAAGGTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR CCA 90 bp AGGCTTCTAGGAGACACAGAGACTCTGAGGTCGTGTCTCGAGGGTGGCTACCTGGGGGAGGCTGCAGCCTaGTGCCAGCCTCACATTGGC +
Preference number: 2 (lower is better)
Translates to: RLLGDTETLRSCLEGGYLGEAAA*CQPHIG
Trigger: GCCAATGTGAGGCTGGCACCAGGCTGCAGCCTCCCC...CAGGTAGCCACCCTCGAGACACGACCTCAGAGTCTCTGTGTCTCCTAGAAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR CCA 90 bp CTGGGCTTGGCTTCCTGGCCTCCAGACAGCAACTGCCAGGCTTCTGGAAGCCCCATGGTGCCACAGGGTTaGGCTGACCGAAACTGGAGA +
Preference number: 2 (lower is better)
Translates to: LGLASWPPDSNCQASGSPMVPQG*ADRNWR
Trigger: TCTCCAGTTTCGGTCAGCCCAACCCTGTGGCACCAT...GGGGCTTCCAGAAGCCTGGCAGTTGCTGTCTGGAGGCCAGGAAGCCAAGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR CAA 90 bp TCCACAGCACAGCTGGGCTGTCTGACTCCATGGGGGCCCCACATCTaGGGAAAGCTGGGTGGACAGCTGATAGCAGGGTACATCGCTGTC +
Preference number: 2 (lower is better)
Translates to: STAQLGCLTPWGPHI*GKLGGQLIAGYIAV
Trigger: GACAGCGATGTACCCTGCTATCAGCTGTCCACCCAGCTTTCCCAAGATGTGGGGCCCCCATGGAGTCAGACAGCCCAGCTGTGCTGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR-3UTR CCA 90 bp ACAGATCGTGGTGGGAATGAGGCTGCGCCTACTAACAATAACCCCACCCACCCTTGGCGCCTGGGTCCTTaGAGAGGCTGTGGGGTTGGG +
Preference number: 2 (lower is better)
Translates to: TDRGGNEAAPTNNNPTHPWRLGP*RGCGVG
Trigger: CCCAACCCCACAGCCTCTCCAAGGACCCAGGCGCCA...AGGGTGGGTGGGGTTATTGTTAGTAGGCGCAGCCTCATTCCCACCACGATCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR CCA 90 bp CGTCTGCCCACTGAGAACACTGTTAGTGCGGAGGGATCCACAGGAGGGGAGAGCGCTACCTGGGGAGGCTaGGCAGAGTCTGGAGACATT +
Preference number: 2 (lower is better)
Translates to: RLPTENTVSAEGSTGGESATWGG*AESGDI
Trigger: AATGTCTCCAGACTCTGCCCAGCCTCCCCAGGTAGC...GCTCTCCCCTCCTGTGGATCCCTCCGCACTAACAGTGTTCTCAGTGGGCAGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR TCA 90 bp ACAGATCGTGGTGGGAATGAGGCTGCGCCTACTAACAATAACCCCACCCACCCTCCAAGTCCCACACACTaGGTCCCCTGTGTCCTGGGG +
Preference number: 2 (lower is better)
Translates to: TDRGGNEAAPTNNNPTHPPSPTH*VPCVLG
Trigger: CCCCAGGACACAGGGGACTCAGTGTGTGGGACTTGG...AGGGTGGGTGGGGTTATTGTTAGTAGGCGCAGCCTCATTCCCACCACGATCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR CCA 90 bp CCCACTGAGAACACTGTTAGTGCGGAGGGATCCACAGGAGGGGAGAGCGGCGCCGTCTGGAGACATTTCTaGCTGTTGTCTGACTGGGAG +
Preference number: 2 (lower is better)
Translates to: PTENTVSAEGSTGGESGAVWRHF*LLSDWE
Trigger: CTCCCAGTCAGACAACAGCCAGAAATGTCTCCAGAC...GGCGCCGCTCTCCCCTCCTGTGGATCCCTCCGCACTAACAGTGTTCTCAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR CCA 90 bp TCACCAGGCCTGGGAAAGCCATGCGGGTTCGAGAGCCTGCGCCATGGCCATGCTGTCTGGAGACATTTCTaGCTGTTGTCTGACTGGGAG +
Preference number: 2 (lower is better)
Translates to: SPGLGKPCGFESLRHGHAVWRHF*LLSDWE
Trigger: CTCCCAGTCAGACAACAGCCAGAAATGTCTCCAGAC...AGCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTCCCAGGCCTGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR TCA 90 bp GGCAAAGGAACCCCGAAACCCAGCCTGGCTCTGCTGGCATGCTCATTTCAACACGAGACACAGAGACTCTaGGGTCGTGTCTCGAGGGTG +
Preference number: 2 (lower is better)
Translates to: GKGTPKPSLALLACSFQHETQRL*GRVSRV
Trigger: CACCCTCGAGACACGACCTCAGAGTCTCTGTGTCTC...GTGTTGAAATGAGCATGCCAGCAGAGCCAGGCTGGGTTTCGGGGTTCCTTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR-3UTR CCA 90 bp AAACCACCAGCTCCTCAGGCAACGAAAAGGGAGGTAGAAAGAACGCCAGAAAGGTCGAGGGTGGCTACCTaGGGAGGCTGGGCAGAGTCT +
Preference number: 2 (lower is better)
Translates to: KPPAPQATKREVERTPERSRVAT*GGWAES
Trigger: AGACTCTGCCCAGCCTCCCCAGGTAGCCACCCTCGA...CCTTTCTGGCGTTCTTTCTACCTCCCTTTTCGTTGCCTGAGGAGCTGGTGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR TCA 90 bp AGGCCAGGGATACCTTTAAGCATCCTACAGTGTGCAGGACAGCTCCCACCAAGGCTCTGCTCGTGTGTCTaGCATGGAGTGACCAAGTCC +
Preference number: 2 (lower is better)
Translates to: RPGIPLSILQCAGQLPPRLCSCV*HGVTKS
Trigger: GGACTTGGTCACTCCATGTCAGACACACGAGCAGAG...CCTTGGTGGGAGCTGTCCTGCACACTGTAGGATGCTTAAAGGTATCCCTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR GCA 90 bp AGGCTTCTAGGAGACACAGAGACTCTGAGGTCGTGTCTCGAGGGTGGCTACCTGAAGCATCCTACAGTGTaGAGGACAGCTCCCACCAAG +
Preference number: 2 (lower is better)
Translates to: RLLGDTETLRSCLEGGYLKHPTV*RTAPTK
Trigger: CTTGGTGGGAGCTGTCCTGCACACTGTAGGATGCTT...CAGGTAGCCACCCTCGAGACACGACCTCAGAGTCTCTGTGTCTCCTAGAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR CCA 90 bp TTGTCTGACTGGGAGCTGCTGGCTAGGGGTGGGTGGAGGCCAGGGATACCTTTACTTCAGGCTCCACAGTaGTTTGTGTTCCTCTCTGCT +
Preference number: 2 (lower is better)
Translates to: LSDWELLARGGWRPGIPLLQAPQ*FVFLSA
Trigger: AGCAGAGAGGAACACAAACCACTGTGGAGCCTGAAG...TAAAGGTATCCCTGGCCTCCACCCACCCCTAGCCAGCAGCTCCCAGTCAGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR CCA 90 bp ACCTTGCAAGATGTATCATTAACTCATGAAACCACCAGCTCCTCAGGCAACGAAGCGCCATGGCCATGCTaGGCAGGGCCCAAGGGGTGC +
Preference number: 2 (lower is better)
Translates to: TLQDVSLTHETTSSSGNEAPWPC*AGPKGC
Trigger: GCACCCCTTGGGCCCTGCCCAGCATGGCCATGGCGC...TTCGTTGCCTGAGGAGCTGGTGGTTTCATGAGTTAATGATACATCTTGCAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR CCA 90 bp ACCTTGCAAGATGTATCATTAACTCATGAAACCACCAGCTCCTCAGGCAACGAAGTGTTCTGGGGTGCGTaGGGCCCGCCCCCGAGGAAG +
Preference number: 2 (lower is better)
Translates to: TLQDVSLTHETTSSSGNEVFWGA*GPPPRK
Trigger: CTTCCTCGGGGGCGGGCCCCACGCACCCCAGAACAC...TTCGTTGCCTGAGGAGCTGGTGGTTTCATGAGTTAATGATACATCTTGCAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR TCA 90 bp GAACCACGCGGAACAGATCGTGGTGGGAATGAGGCTGCGCCTACTAACAATAACCTCTGCTCGTGTGTCTaGCATGGAGTGACCAAGTCC +
Preference number: 2 (lower is better)
Translates to: EPRGTDRGGNEAAPTNNNLCSCV*HGVTKS
Trigger: GGACTTGGTCACTCCATGTCAGACACACGAGCAGAG...GTTATTGTTAGTAGGCGCAGCCTCATTCCCACCACGATCTGTTCCGCGTGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR TCA 90 bp CTTGTGACAAAACTGATAAAACCGAAGGACACTCTGCTGAGTGAAGTAAGCCAGCACAGGCCCCACCTCTaGACTCAGCCGCAGGTGGGC +
Preference number: 2 (lower is better)
Translates to: LVTKLIKPKDTLLSEVSQHRPHL*TQPQVG
Trigger: GCCCACCTGCGGCTGAGTTCAGAGGTGGGGCCTGTG...CTGGCTTACTTCACTCAGCAGAGTGTCCTTCGGTTTTATCAGTTTTGTCACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR-3UTR GCA 90 bp ACCTTGCAAGATGTATCATTAACTCATGAAACCACCAGCTCCTCAGGCAACGAACCTGTGTCCTGGGGCTaGTGGCGCCTGGGTCCTTGG +
Preference number: 2 (lower is better)
Translates to: TLQDVSLTHETTSSSGNEPVSWG*WRLGPW
Trigger: CCAAGGACCCAGGCGCCAGCAGCCCCAGGACACAGG...TTCGTTGCCTGAGGAGCTGGTGGTTTCATGAGTTAATGATACATCTTGCAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR GCA 90 bp TACACCTTGCAAGATGTATCATTAACTCATGAAACCACCAGCTCCTCAGGCAACGCGCTGCAGGAGGCTTaGGGAGAACACGGCGACCGA +
Preference number: 2 (lower is better)
Translates to: YTLQDVSLTHETTSSSGNALQEA*GEHGDR
Trigger: TCGGTCGCCGTGTTCTCCGCAAGCCTCCTGCAGCGC...GTTGCCTGAGGAGCTGGTGGTTTCATGAGTTAATGATACATCTTGCAAGGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR CCA 90 bp GAACCACGCGGAACAGATCGTGGTGGGAATGAGGCTGCGCCTACTAACAATAACCTCGTGTGTCTGACATaGAGTGACCAAGTCCCACAC +
Preference number: 2 (lower is better)
Translates to: EPRGTDRGGNEAAPTNNNLVCLT*SDQVPH
Trigger: GTGTGGGACTTGGTCACTCCATGTCAGACACACGAG...GTTATTGTTAGTAGGCGCAGCCTCATTCCCACCACGATCTGTTCCGCGTGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR TCA 90 bp GGCAAAGGAACCCCGAAACCCAGCCTGGCTCTGCTGGCATGCTCATTTCAACACTGTATCATTAACTCATaGAACCACCAGCTCCTCAGG +
Preference number: 2 (lower is better)
Translates to: GKGTPKPSLALLACSFQHCIINS*NHQLLR
Trigger: CCTGAGGAGCTGGTGGTTTCATGAGTTAATGATACA...GTGTTGAAATGAGCATGCCAGCAGAGCCAGGCTGGGTTTCGGGGTTCCTTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR CAA 90 bp AGCTGTTGTGGACTCTTCTTAAGGAGCTTCAGGCTCCACAGTGGTTaGTGTTCCTCTCTGCTCGTGTGTCTGACATGGAGTGACCAAGTC +
Preference number: 2 (lower is better)
Translates to: SCCGLFLRSFRLHSG*CSSLLVCLTWSDQV
Trigger: GACTTGGTCACTCCATGTCAGACACACGAGCAGAGAGGAACACAAACCACTGTGGAGCCTGAAGCTCCTTAAGAAGAGTCCACAACAGCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR CCA 90 bp AAACCACCAGCTCCTCAGGCAACGAAAAGGGAGGTAGAAAGAACGCCAGAAAGGCTTCAGGCTCCACAGTaGTTTGTGTTCCTCTCTGCT +
Preference number: 2 (lower is better)
Translates to: KPPAPQATKREVERTPERLQAPQ*FVFLSA
Trigger: AGCAGAGAGGAACACAAACCACTGTGGAGCCTGAAG...CCTTTCTGGCGTTCTTTCTACCTCCCTTTTCGTTGCCTGAGGAGCTGGTGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR CCA 90 bp CTTGTGACAAAACTGATAAAACCGAAGGACACTCTGCTGAGTGAAGTAAGCCAGGAACTCAGCCGCAGGTaGGCTTCCTGGGCTTGGCTT +
Preference number: 2 (lower is better)
Translates to: LVTKLIKPKDTLLSEVSQELSRR*ASWAWL
Trigger: AAGCCAAGCCCAGGAAGCCCACCTGCGGCTGAGTTC...CTGGCTTACTTCACTCAGCAGAGTGTCCTTCGGTTTTATCAGTTTTGTCACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR CAA 90 bp CACAGGGTTGGGCTGACCGAAACTGGAGAGATTGTAGGGGAACATTaGTGCTCAAGTGCAAAACTCCACTTTGTCTTTCCACAGCACAGC +
Preference number: 2 (lower is better)
Translates to: HRVGLTETGEIVGEH*CSSAKLHFVFPQHS
Trigger: GCTGTGCTGTGGAAAGACAAAGTGGAGTTTTGCACTTGAGCACAAATGTTCCCCTACAATCTCTCCAGTTTCGGTCAGCCCAACCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR-3UTR CCA 90 bp TACACCTTGCAAGATGTATCATTAACTCATGAAACCACCAGCTCCTCAGGCAACCAGAATCACCAGGCCTaGGAAAGCCATGCGGGTTCG +
Preference number: 2 (lower is better)
Translates to: YTLQDVSLTHETTSSSGNQNHQA*ESHAGS
Trigger: CGAACCCGCATGGCTTTCCCAGGCCTGGTGATTCTG...GTTGCCTGAGGAGCTGGTGGTTTCATGAGTTAATGATACATCTTGCAAGGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR CCA 90 bp TACACCTTGCAAGATGTATCATTAACTCATGAAACCACCAGCTCCTCAGGCAACAGGCTGGGCAGAGTCTaGAGACATTTCTGGCTGTTG +
Preference number: 2 (lower is better)
Translates to: YTLQDVSLTHETTSSSGNRLGRV*RHFWLL
Trigger: CAACAGCCAGAAATGTCTCCAGACTCTGCCCAGCCT...GTTGCCTGAGGAGCTGGTGGTTTCATGAGTTAATGATACATCTTGCAAGGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR CCA 90 bp CACTCGTTTCCTCATGAAATTAGTTACAGAAAGTCTTTAACACGTGTTCATTCTTCGAGGGTGGCTACCTaGGGAGGCTGGGCAGAGTCT +
Preference number: 2 (lower is better)
Translates to: HSFPHEISYRKSLTRVHSSRVAT*GGWAES
Trigger: AGACTCTGCCCAGCCTCCCCAGGTAGCCACCCTCGA...AGAATGAACACGTGTTAAAGACTTTCTGTAACTAATTTCATGAGGAAACGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR-3UTR CCA 90 bp ACCTTGCAAGATGTATCATTAACTCATGAAACCACCAGCTCCTCAGGCAACGAATCCCACCAGCTGTTGTaGACTCTTCTTAAGGAGCTT +
Preference number: 2 (lower is better)
Translates to: TLQDVSLTHETTSSSGNESHQLL*TLLKEL
Trigger: AAGCTCCTTAAGAAGAGTCCACAACAGCTGGTGGGA...TTCGTTGCCTGAGGAGCTGGTGGTTTCATGAGTTAATGATACATCTTGCAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR-3UTR CCA 90 bp CACTCGTTTCCTCATGAAATTAGTTACAGAAAGTCTTTAACACGTGTTCATTCTTCCCACCAGCTGTTGTaGACTCTTCTTAAGGAGCTT +
Preference number: 2 (lower is better)
Translates to: HSFPHEISYRKSLTRVHSSHQLL*TLLKEL
Trigger: AAGCTCCTTAAGAAGAGTCCACAACAGCTGGTGGGA...AGAATGAACACGTGTTAAAGACTTTCTGTAACTAATTTCATGAGGAAACGAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR-3UTR GCA 90 bp CACTCGTTTCCTCATGAAATTAGTTACAGAAAGTCTTTAACACGTGTTCATTCTAATAAGGCTTTGGCGTaGTTTTCCACATTTTTAGGT +
Preference number: 2 (lower is better)
Translates to: HSFPHEISYRKSLTRVHSNKALA*FSTFLG
Trigger: ACCTAAAAATGTGGAAAAGCACGCCAAAGCCTTATT...AGAATGAACACGTGTTAAAGACTTTCTGTAACTAATTTCATGAGGAAACGAGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR CCA 72 bp GCCATGCGGGTTCGAGAGCCTGCGCCATGGCCATGCTaGGCAGGGCCCAAGGGGTGCCCAGGCGTCTGCCCA +
Preference number: 3 (lower is better)
Translates to: AMRVREPAPWPC*AGPKGCPGVCP
Trigger: TGGGCAGACGCCTGGGCACCCCTTGGGCCCTGCCCAGCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR GCA 72 bp CAGCCTCACATTGGCAGGCGGGCGCTGCAGGAGGCTTaGGGAGAACACGGCGACCGAGGGAGGTTTGGCGGG +
Preference number: 3 (lower is better)
Translates to: QPHIGRRALQEA*GEHGDRGRFGG
Trigger: CCCGCCAAACCTCCCTCGGTCGCCGTGTTCTCCGCAAGCCTCCTGCAGCGCCCGCCTGCCAATGTGAGGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR GCA 72 bp CAGCCTGGTGCCAGCCTCACATTGGCAGGCGGGCGCTaGAGGAGGCTTGCGGAGAACACGGCGACCGAGGGA +
Preference number: 3 (lower is better)
Translates to: QPGASLTLAGGR*RRLAENTATEG
Trigger: TCCCTCGGTCGCCGTGTTCTCCGCAAGCCTCCTGCAGCGCCCGCCTGCCAATGTGAGGCTGGCACCAGGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR GCA 72 bp CACCAGGCCTGGGAAAGCCATGCGGGTTCGAGAGCCTaGGCCATGGCCATGCTGGGCAGGGCCCAAGGGGTG +
Preference number: 3 (lower is better)
Translates to: HQAWESHAGSRA*AMAMLGRAQGV
Trigger: CACCCCTTGGGCCCTGCCCAGCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTCCCAGGCCTGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR CCA 72 bp ACGCCAGAAAGGTGGGTCTGTGTGTTCTGGGGTGCGTaGGGCCCGCCCCCGAGGAAGGTGCCAACCGTCCCT +
Preference number: 3 (lower is better)
Translates to: TPERWVCVFWGA*GPPPRKVPTVP
Trigger: AGGGACGGTTGGCACCTTCCTCGGGGGCGGGCCCCACGCACCCCAGAACACACAGACCCACCTTTCTGGCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR GCA 72 bp CCTGCGCCATGGCCATGCTGGGCAGGGCCCAAGGGGTaGCCAGGCGTCTGCCCACTGAGAACACTGTTAGTG +
Preference number: 3 (lower is better)
Translates to: PAPWPCWAGPKG*PGVCPLRTLLV
Trigger: CACTAACAGTGTTCTCAGTGGGCAGACGCCTGGGCACCCCTTGGGCCCTGCCCAGCATGGCCATGGCGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR GCA 72 bp CCCTGGAGAGCAGAATCACCAGGCCTGGGAAAGCCATaGGGGTTCGAGAGCCTGCGCCATGGCCATGCTGGG +
Preference number: 3 (lower is better)
Translates to: PWRAESPGLGKP*GFESLRHGHAG
Trigger: CCCAGCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTCCCAGGCCTGGTGATTCTGCTCTCCAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR GCA 72 bp CCAGACAGCAACTGCCAGGCTTCTGGAAGCCCCTCCTaGCCCAAGACCCCACAGCAGCGTCCAGCAGTCCAG +
Preference number: 3 (lower is better)
Translates to: PDSNCQASGSPS*PKTPQQRPAVQ
Trigger: CTGGACTGCTGGACGCTGCTGTGGGGTCTTGGGGCAGGAGGGGCTTCCAGAAGCCTGGCAGTTGCTGTCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR-3UTR CAA 90 bp GGCACTGGTCCCAGAGCAGCCACACTTACGGTCGAGACACAAAGTGGAATGGGGGGCGCTGCAGGAGGCTaGCGGAGAACACGGCGACCG +
Preference number: 3 (lower is better)
Translates to: GTGPRAATLTVETQSGMGGAAGG*RRTRRP
Trigger: CGGTCGCCGTGTTCTCCGCAAGCCTCCTGCAGCGCC...CCCCATTCCACTTTGTGTCTCGACCGTAAGTGTGGCTGCTCTGGGACCAGTGCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR CCA 72 bp GGAGGCTTGCGGAGAACACGGCGACCGAGGGAGGTTTaGCGGGAACCACGCGGAACAGATCGTGGTGGGAAT +
Preference number: 3 (lower is better)
Translates to: GGLRRTRRPREV*REPRGTDRGGN
Trigger: ATTCCCACCACGATCTGTTCCGCGTGGTTCCCGCCAAACCTCCCTCGGTCGCCGTGTTCTCCGCAAGCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR CCA 72 bp GTGCCAACCGTCCCTGGAGAGCAGAATCACCAGGCCTaGGAAAGCCATGCGGGTTCGAGAGCCTGCGCCATG +
Preference number: 3 (lower is better)
Translates to: VPTVPGEQNHQA*ESHAGSRACAM
Trigger: CATGGCGCAGGCTCTCGAACCCGCATGGCTTTCCCAGGCCTGGTGATTCTGCTCTCCAGGGACGGTTGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR CCA 72 bp GTAGAAAGAACGCCAGAAAGGTGGGTCTGTGTGTTCTaGGGTGCGTGGGGCCCGCCCCCGAGGAAGGTGCCA +
Preference number: 3 (lower is better)
Translates to: VERTPERWVCVF*GAWGPPPRKVP
Trigger: TGGCACCTTCCTCGGGGGCGGGCCCCACGCACCCCAGAACACACAGACCCACCTTTCTGGCGTTCTTTCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR CCA 72 bp GGACCCCTGGCGGCAAAGGAACCCCGAAACCCAGCCTaGCTCTGCTGGCATGCTCATTTCAACACTCCCGGC +
Preference number: 3 (lower is better)
Translates to: GPLAAKEPRNPA*LCWHAHFNTPG
Trigger: GCCGGGAGTGTTGAAATGAGCATGCCAGCAGAGCCAGGCTGGGTTTCGGGGTTCCTTTGCCGCCAGGGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR TCA 72 bp CAGTCCAGCAGGACCGTCCCGAAGCCTCTGTGGGGGTaGTGCTCTAGGCTGTACCCATGGTGCCACAGGGTT +
Preference number: 3 (lower is better)
Translates to: QSSRTVPKPLWG*CSRLYPWCHRV
Trigger: AACCCTGTGGCACCATGGGTACAGCCTAGAGCATCACCCCCACAGAGGCTTCGGGACGGTCCTGCTGGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR CCA 72 bp GGTACATCGCTGTCATCTGTGGACACGCAGGACCCCTaGCGGCAAAGGAACCCCGAAACCCAGCCTGGCTCT +
Preference number: 3 (lower is better)
Translates to: GTSLSSVDTQDP*RQRNPETQPGS
Trigger: AGAGCCAGGCTGGGTTTCGGGGTTCCTTTGCCGCCAGGGGTCCTGCGTGTCCACAGATGACAGCGATGTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR-3UTR CAA 90 bp GAAAGCCATGCGGGTTCGAGAGCCTGCGCCATGGCCATGCTGGGCAGGGCCCAAAGACATTTCTGGCTGTaGTCTGACTGGGAGCTGCTG +
Preference number: 3 (lower is better)
Translates to: ESHAGSRACAMAMLGRAQRHFWL*SDWELL
Trigger: CAGCAGCTCCCAGTCAGACAACAGCCAGAAATGTCT...TTGGGCCCTGCCCAGCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR GCA 72 bp CTGGCGGCAAAGGAACCCCGAAACCCAGCCTGGCTCTaGTGGCATGCTCATTTCAACACTCCCGGCCTAGGA +
Preference number: 3 (lower is better)
Translates to: LAAKEPRNPAWL*WHAHFNTPGLG
Trigger: TCCTAGGCCGGGAGTGTTGAAATGAGCATGCCAGCAGAGCCAGGCTGGGTTTCGGGGTTCCTTTGCCGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR CCA 72 bp TGGACAGCTGATAGCAGGGTACATCGCTGTCATCTGTaGACACGCAGGACCCCTGGCGGCAAAGGAACCCCG +
Preference number: 3 (lower is better)
Translates to: WTADSRVHRCHL*TRRTPGGKGTP
Trigger: CGGGGTTCCTTTGCCGCCAGGGGTCCTGCGTGTCCACAGATGACAGCGATGTACCCTGCTATCAGCTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR-3UTR CAA 90 bp ACAGCAATTCATTCACAACGCACAGGCCCCACCTCTGAACTCAGCCGCAGGTGGTGGGGGCCCCACATCTaGGGAAAGCTGGGTGGACAG +
Preference number: 3 (lower is better)
Translates to: TAIHSQRTGPTSELSRRWWGPHI*GKLGGQ
Trigger: CTGTCCACCCAGCTTTCCCAAGATGTGGGGCCCCCA...CCACCTGCGGCTGAGTTCAGAGGTGGGGCCTGTGCGTTGTGAATGAATTGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR GCA 72 bp GTGGAGGCCAGGGATACCTTTAAGCATCCTACAGTGTaGAGGACAGCTCCCACCAAGGAGGACAGCCCGCCA +
Preference number: 3 (lower is better)
Translates to: VEARDTFKHPTV*RTAPTKEDSPP
Trigger: TGGCGGGCTGTCCTCCTTGGTGGGAGCTGTCCTGCACACTGTAGGATGCTTAAAGGTATCCCTGGCCTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR GCA 72 bp AAAGGAACCCCGAAACCCAGCCTGGCTCTGCTGGCATaGTCATTTCAACACTCCCGGCCTAGGAGTCCGTTC +
Preference number: 3 (lower is better)
Translates to: KGTPKPSLALLA*SFQHSRPRSPF
Trigger: GAACGGACTCCTAGGCCGGGAGTGTTGAAATGAGCATGCCAGCAGAGCCAGGCTGGGTTTCGGGGTTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR TCA 72 bp AGCACAGAGCTTCGGTTTGGGAAGATGAGAAAGTTCTaGAGGCGGAGGGTGGCGGTGGCTGCACAATGCGAA +
Preference number: 3 (lower is better)
Translates to: STELRFGKMRKF*RRRVAVAAQCE
Trigger: TTCGCATTGTGCAGCCACCGCCACCCTCCGCCTTCAGAACTTTCTCATCTTCCCAAACCGAAGCTCTGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR-3UTR CAA 90 bp GAACCACGCGGAACAGATCGTGGTGGGAATGAGGCTGCGCCTACTAACAATAACAGGCTCCACAGTGGTTaGTGTTCCTCTCTGCTCGTG +
Preference number: 3 (lower is better)
Translates to: EPRGTDRGGNEAAPTNNNRLHSG*CSSLLV
Trigger: CACGAGCAGAGAGGAACACAAACCACTGTGGAGCCT...GTTATTGTTAGTAGGCGCAGCCTCATTCCCACCACGATCTGTTCCGCGTGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR TCA 72 bp TCCACAGTGGTTTGTGTTCCTCTCTGCTCGTGTGTCTaGCATGGAGTGACCAAGTCCCACACACTGAGTCCC +
Preference number: 3 (lower is better)
Translates to: STVVCVPLCSCV*HGVTKSHTLSP
Trigger: GGGACTCAGTGTGTGGGACTTGGTCACTCCATGTCAGACACACGAGCAGAGAGGAACACAAACCACTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR GCA 72 bp GATGAGAAAGTTCTGAAGGCGGAGGGTGGCGGTGGCTaGACAATGCGAATGTACCTAATGCCACAGAACCGT +
Preference number: 3 (lower is better)
Translates to: DEKVLKAEGGGG*TMRMYLMPQNR
Trigger: ACGGTTCTGTGGCATTAGGTACATTCGCATTGTGCAGCCACCGCCACCCTCCGCCTTCAGAACTTTCTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR CCA 72 bp GTACCCATGGTGCCACAGGGTTGGGCTGACCGAAACTaGAGAGATTGTAGGGGAACATTTGTGCTCAAGTGC +
Preference number: 3 (lower is better)
Translates to: VPMVPQGWADRN*RDCRGTFVLKC
Trigger: GCACTTGAGCACAAATGTTCCCCTACAATCTCTCCAGTTTCGGTCAGCCCAACCCTGTGGCACCATGGGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR-3UTR CAA 90 bp AAACCACCAGCTCCTCAGGCAACGAAAAGGGAGGTAGAAAGAACGCCAGAAAGGAGGCTCCACAGTGGTTaGTGTTCCTCTCTGCTCGTG +
Preference number: 3 (lower is better)
Translates to: KPPAPQATKREVERTPERRLHSG*CSSLLV
Trigger: CACGAGCAGAGAGGAACACAAACCACTGTGGAGCCT...CCTTTCTGGCGTTCTTTCTACCTCCCTTTTCGTTGCCTGAGGAGCTGGTGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR CCA 72 bp TTGTGGACTCTTCTTAAGGAGCTTCAGGCTCCACAGTaGTTTGTGTTCCTCTCTGCTCGTGTGTCTGACATG +
Preference number: 3 (lower is better)
Translates to: LWTLLKELQAPQ*FVFLSARVSDM
Trigger: CATGTCAGACACACGAGCAGAGAGGAACACAAACCACTGTGGAGCCTGAAGCTCCTTAAGAAGAGTCCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR TCA 72 bp CTATGTGTACACCTTGCAAGATGTATCATTAACTCATaGAACCACCAGCTCCTCAGGCAACGAAAAGGGAGG +
Preference number: 3 (lower is better)
Translates to: LCVHLARCIINS*NHQLLRQRKGR
Trigger: CCTCCCTTTTCGTTGCCTGAGGAGCTGGTGGTTTCATGAGTTAATGATACATCTTGCAAGGTGTACACATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR GCA 72 bp AACTGGAGAGATTGTAGGGGAACATTTGTGCTCAAGTaGAAAACTCCACTTTGTCTTTCCACAGCACAGCTG +
Preference number: 3 (lower is better)
Translates to: NWRDCRGTFVLK*KTPLCLSTAQL
Trigger: CAGCTGTGCTGTGGAAAGACAAAGTGGAGTTTTGCACTTGAGCACAAATGTTCCCCTACAATCTCTCCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR GCA 72 bp CTGACCGAAACTGGAGAGATTGTAGGGGAACATTTGTaGTCAAGTGCAAAACTCCACTTTGTCTTTCCACAG +
Preference number: 3 (lower is better)
Translates to: LTETGEIVGEHL*SSAKLHFVFPQ
Trigger: CTGTGGAAAGACAAAGTGGAGTTTTGCACTTGAGCACAAATGTTCCCCTACAATCTCTCCAGTTTCGGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR GCA 90 bp TGCGGAGGGATCCACAGGAGGGGAGAGCGGCGCCAGGGTCCCGGACACAGGCAACCTGCGCCATGGCCATaGTGGGCAGGGCCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: CGGIHRRGERRQGPGHRQPAPWP*WAGPKG
Trigger: CCCCTTGGGCCCTGCCCAGCATGGCCATGGCGCAGG...TTGCCTGTGTCCGGGACCCTGGCGCCGCTCTCCCCTCCTGTGGATCCCTCCGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp GGCGGGCGCTGCAGGAGGCTTGCGGAGAACACGGCGACCGAGGGAGGTTTGGCGAGCAGCGTCCCAAACTaGGAGCCGGCGCCCACGATG +
Preference number: 4 (lower is better)
Translates to: GGRCRRLAENTATEGGLASSVPN*EPAPTM
Trigger: CATCGTGGGCGCCGGCTCCCAGTTTGGGACGCTGCT...CGCCAAACCTCCCTCGGTCGCCGTGTTCTCCGCAAGCCTCCTGCAGCGCCCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp GGCGGGCGCTGCAGGAGGCTTGCGGAGAACACGGCGACCGAGGGAGGTTTGGCGCAGGCTGCAGAGAGCTaGGAGACGACGGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: GGRCRRLAENTATEGGLAQAAES*ETTAAQ
Trigger: CTGGGCAGCCGTCGTCTCCCAGCTCTCTGCAGCCTG...CGCCAAACCTCCCTCGGTCGCCGTGTTCTCCGCAAGCCTCCTGCAGCGCCCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp GGCGGGCGCTGCAGGAGGCTTGCGGAGAACACGGCGACCGAGGGAGGTTTGGCGCGCAGGTGGGCTTCCTaGGCTTGGCTTCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: GGRCRRLAENTATEGGLARRWAS*AWLPGL
Trigger: GAGGCCAGGAAGCCAAGCCCAGGAAGCCCACCTGCG...CGCCAAACCTCCCTCGGTCGCCGTGTTCTCCGCAAGCCTCCTGCAGCGCCCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR CCA 90 bp GGCGGGCGCTGCAGGAGGCTTGCGGAGAACACGGCGACCGAGGGAGGTTTGGCGGGACTCTGTTGTGCCTaGACACCGGCCGGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: GGRCRRLAENTATEGGLAGLCCA*TPAGFG
Trigger: CCCAAAGCCGGCCGGTGTCCAGGCACAACAGAGTCC...CGCCAAACCTCCCTCGGTCGCCGTGTTCTCCGCAAGCCTCCTGCAGCGCCCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR CAA 72 bp CCAGCCTCACATTGGCAGGCGGGCGCTGCAGGAGGCTaGCGGAGAACACGGCGACCGAGGGAGGTTTGGCGG +
Preference number: 4 (lower is better)
Translates to: PASHWQAGAAGG*RRTRRPREVWR
Trigger: CCGCCAAACCTCCCTCGGTCGCCGTGTTCTCCGCAAGCCTCCTGCAGCGCCCGCCTGCCAATGTGAGGCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR GCA 90 bp TGCGGAGGGATCCACAGGAGGGGAGAGCGGCGCCAGGGTCCCGGACACAGGCAATGGGATTGGGGAGGCTaGAGCCTGGTGCCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: CGGIHRRGERRQGPGHRQWDWGG*SLVPAS
Trigger: TGAGGCTGGCACCAGGCTGCAGCCTCCCCAATCCCA...TTGCCTGTGTCCGGGACCCTGGCGCCGCTCTCCCCTCCTGTGGATCCCTCCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR GCA 90 bp GAAAGCCATGCGGGTTCGAGAGCCTGCGCCATGGCCATGCTGGGCAGGGCCCAACGCCCCCGAGGAAGGTaGCAACCGTCCCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: ESHAGSRACAMAMLGRAQRPRGR*QPSLES
Trigger: GCTCTCCAGGGACGGTTGGCACCTTCCTCGGGGGCG...TTGGGCCCTGCCCAGCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp CGCTGCAGGAGGCTTGCGGAGAACACGGCGACCGAGGGAGGTTTGGCGGGAACCTGGCTGCATCGGGCTTaGGGTGCTCAGACGGCGTGG +
Preference number: 4 (lower is better)
Translates to: RCRRLAENTATEGGLAGTWLHRA*GAQTAW
Trigger: CCACGCCGTCTGAGCACCCCAAGCCCGATGCAGCCA...GGTTCCCGCCAAACCTCCCTCGGTCGCCGTGTTCTCCGCAAGCCTCCTGCAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp ATCACCAGGCCTGGGAAAGCCATGCGGGTTCGAGAGCCTGCGCCATGGCCATGCGTCCCCGTCCATGCCTaGCACTCGGGCCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: ITRPGKAMRVREPAPWPCVPVHA*HSGLAS
Trigger: GGAGGCCAGGCCCGAGTGCCAGGCATGGACGGGGAC...GCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTCCCAGGCCTGGTGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370349.7
CDS-3UTR CCA 90 bp CGCTGCAGGAGGCTTGCGGAGAACACGGCGACCGAGGGAGGTTTGGCGGGAACCTGGGCACTGCTCAGGTaGGCGAGCAGTGGGGTGACG +
Preference number: 4 (lower is better)
Translates to: RCRRLAENTATEGGLAGTWALLR*ASSGVT
Trigger: CGTCACCCCACTGCTCGCCCACCTGAGCAGTGCCCA...GGTTCCCGCCAAACCTCCCTCGGTCGCCGTGTTCTCCGCAAGCCTCCTGCAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp TGCGGAGGGATCCACAGGAGGGGAGAGCGGCGCCAGGGTCCCGGACACAGGCAAGTCATGAAGGCCAGGTaGGCACTGCTCAGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: CGGIHRRGERRQGPGHRQVMKAR*ALLRWA
Trigger: CGCCCACCTGAGCAGTGCCCACCTGGCCTTCATGAC...TTGCCTGTGTCCGGGACCCTGGCGCCGCTCTCCCCTCCTGTGGATCCCTCCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp GGACCGTCCCGAAGCCTCTGTGGGGGTGATGCTCTAGGCTGTACCCATGGTGCCGCAGCGAGCCTGGTCTaGACCCAGGCCCACCCCACC +
Preference number: 4 (lower is better)
Translates to: GPSRSLCGGDALGCTHGAAASLV*TQAHPT
Trigger: GGTGGGGTGGGCCTGGGTCCAGACCAGGCTCGCTGC...GGCACCATGGGTACAGCCTAGAGCATCACCCCCACAGAGGCTTCGGGACGGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR CCA 90 bp TGCGGAGGGATCCACAGGAGGGGAGAGCGGCGCCAGGGTCCCGGACACAGGCAACGACCGAGGGAGGTTTaGCGGGAACCACGCGGAACA +
Preference number: 4 (lower is better)
Translates to: CGGIHRRGERRQGPGHRQRPREV*REPRGT
Trigger: TGTTCCGCGTGGTTCCCGCCAAACCTCCCTCGGTCG...TTGCCTGTGTCCGGGACCCTGGCGCCGCTCTCCCCTCCTGTGGATCCCTCCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp GGCGGGCGCTGCAGGAGGCTTGCGGAGAACACGGCGACCGAGGGAGGTTTGGCGGGTGCCAACCGTCCCTaGAGAGCAGAATCACCAGGC +
Preference number: 4 (lower is better)
Translates to: GGRCRRLAENTATEGGLAGANRP*RAESPG
Trigger: GCCTGGTGATTCTGCTCTCCAGGGACGGTTGGCACC...CGCCAAACCTCCCTCGGTCGCCGTGTTCTCCGCAAGCCTCCTGCAGCGCCCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp AGACCCCACAGCAGCGTCCAGCAGTCCAGCAGGACCGTCCCGAAGCCTCTGTGGTGGGTCTGTGTGTTCTaGGGTGCGTGGGGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: RPHSSVQQSSRTVPKPLWWVCVF*GAWGPP
Trigger: GGGCGGGCCCCACGCACCCCAGAACACACAGACCCA...CCACAGAGGCTTCGGGACGGTCCTGCTGGACTGCTGGACGCTGCTGTGGGGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR GCA 90 bp GAAAGCCATGCGGGTTCGAGAGCCTGCGCCATGGCCATGCTGGGCAGGGCCCAATTGGCAGGCGGGCGCTaGAGGAGGCTTGCGGAGAAC +
Preference number: 4 (lower is better)
Translates to: ESHAGSRACAMAMLGRAQLAGGR*RRLAEN
Trigger: GTTCTCCGCAAGCCTCCTGCAGCGCCCGCCTGCCAA...TTGGGCCCTGCCCAGCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR GCA 90 bp CCCACTGAGAACACTGTTAGTGCGGAGGGATCCACAGGAGGGGAGAGCGGCGCCGCGGGTTCGAGAGCCTaGGCCATGGCCATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PTENTVSAEGSTGGESGAAGSRA*AMAMLG
Trigger: GCCCAGCATGGCCATGGCGCAGGCTCTCGAACCCGC...GGCGCCGCTCTCCCCTCCTGTGGATCCCTCCGCACTAACAGTGTTCTCAGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR GCA 90 bp GAAAGCCATGCGGGTTCGAGAGCCTGCGCCATGGCCATGCTGGGCAGGGCCCAAGGCCTGGGAAAGCCATaGGGGTTCGAGAGCCTGCGC +
Preference number: 4 (lower is better)
Translates to: ESHAGSRACAMAMLGRAQGLGKP*GFESLR
Trigger: GCGCAGGCTCTCGAACCCGCATGGCTTTCCCAGGCC...TTGGGCCCTGCCCAGCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp GAAAGCCATGCGGGTTCGAGAGCCTGCGCCATGGCCATGCTGGGCAGGGCCCAATGGCTGCATCGGGCTTaGGGTGCTCAGACGGCGTGG +
Preference number: 4 (lower is better)
Translates to: ESHAGSRACAMAMLGRAQWLHRA*GAQTAW
Trigger: CCACGCCGTCTGAGCACCCCAAGCCCGATGCAGCCA...TTGGGCCCTGCCCAGCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp GGCGGGCGCTGCAGGAGGCTTGCGGAGAACACGGCGACCGAGGGAGGTTTGGCGTGCAGATGGGCATGCTaGAGCGGGCGCAGTACAGAA +
Preference number: 4 (lower is better)
Translates to: GGRCRRLAENTATEGGLACRWAC*SGRSTE
Trigger: TTCTGTACTGCGCCCGCTCCAGCATGCCCATCTGCA...CGCCAAACCTCCCTCGGTCGCCGTGTTCTCCGCAAGCCTCCTGCAGCGCCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp TCACCAGGCCTGGGAAAGCCATGCGGGTTCGAGAGCCTGCGCCATGGCCATGCTGACACCGGCCGGCTTTaGGCCAGGACACCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: SPGLGKPCGFESLRHGHADTGRL*ARTPKA
Trigger: GGCCTTGGGTGTCCTGGCCCAAAGCCGGCCGGTGTC...AGCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTCCCAGGCCTGGTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp GAAAGCCATGCGGGTTCGAGAGCCTGCGCCATGGCCATGCTGGGCAGGGCCCAATGGCGCCTGGGTCCTTaGAGAGGCTGTGGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: ESHAGSRACAMAMLGRAQWRLGP*RGCGVG
Trigger: CCCAACCCCACAGCCTCTCCAAGGACCCAGGCGCCA...TTGGGCCCTGCCCAGCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp GGCGGGCGCTGCAGGAGGCTTGCGGAGAACACGGCGACCGAGGGAGGTTTGGCGCAGAATCACCAGGCCTaGGAAAGCCATGCGGGTTCG +
Preference number: 4 (lower is better)
Translates to: GGRCRRLAENTATEGGLAQNHQA*ESHAGS
Trigger: CGAACCCGCATGGCTTTCCCAGGCCTGGTGATTCTG...CGCCAAACCTCCCTCGGTCGCCGTGTTCTCCGCAAGCCTCCTGCAGCGCCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR TCA 90 bp CGCTGCAGGAGGCTTGCGGAGAACACGGCGACCGAGGGAGGTTTGGCGGGAACCCCACGATGCTGTAGGTaGAGGCTCGCTCACTCTCCC +
Preference number: 4 (lower is better)
Translates to: RCRRLAENTATEGGLAGTPRCCR*RLAHSP
Trigger: GGGAGAGTGAGCGAGCCTTCACCTACAGCATCGTGG...GGTTCCCGCCAAACCTCCCTCGGTCGCCGTGTTCTCCGCAAGCCTCCTGCAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR TCA 90 bp GAAAGCCATGCGGGTTCGAGAGCCTGCGCCATGGCCATGCTGGGCAGGGCCCAACCAAGTCCCACACACTaGGTCCCCTGTGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: ESHAGSRACAMAMLGRAQPSPTH*VPCVLG
Trigger: CCCCAGGACACAGGGGACTCAGTGTGTGGGACTTGG...TTGGGCCCTGCCCAGCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR TCA 90 bp GTGGTGGGAATGAGGCTGCGCCTACTAACAATAACCCCACCCACCCTGACGGCCGGCCACACCAGCCTGTaGGGAGGACAGGGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: VVGMRLRLLTITPPTLTAGHTSL*GGQGRA
Trigger: GGCTCGGCCCTGTCCTCCTCACAGGCTGGTGTGGCC...GGCCGTCAGGGTGGGTGGGGTTATTGTTAGTAGGCGCAGCCTCATTCCCACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR GCA 90 bp AGGAGACACAGAGACTCTGAGGTCGTGTCTCGAGGGTGGCTACCTGGGGAGGCTGCTGTGTCCCGGGGCTaGCTCCCAGCCCAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: RRHRDSEVVSRGWLPGEAAVSRG*LPAQAD
Trigger: GTCAGCCTGGGCTGGGAGGCAGCCCCGGGACACAGC...AGCCTCCCCAGGTAGCCACCCTCGAGACACGACCTCAGAGTCTCTGTGTCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR GCA 90 bp GAAAGCCATGCGGGTTCGAGAGCCTGCGCCATGGCCATGCTGGGCAGGGCCCAACGGTGCAGATGGGCATaGTGGAGCGGGCGCAGTACA +
Preference number: 4 (lower is better)
Translates to: ESHAGSRACAMAMLGRAQRCRWA*WSGRST
Trigger: TGTACTGCGCCCGCTCCAGCATGCCCATCTGCACCG...TTGGGCCCTGCCCAGCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR GCA 90 bp CGCTGCAGGAGGCTTGCGGAGAACACGGCGACCGAGGGAGGTTTGGCGGGAACCGGCTCATGGAGACGGTaGAGATGGGCATGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: RCRRLAENTATEGGLAGTGSWRR*RWACWS
Trigger: GCTCCAGCATGCCCATCTGCACCGTCTCCATGAGCC...GGTTCCCGCCAAACCTCCCTCGGTCGCCGTGTTCTCCGCAAGCCTCCTGCAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR GCA 90 bp AGACCCCACAGCAGCGTCCAGCAGTCCAGCAGGACCGTCCCGAAGCCTCTGTGGCAGGGGACTCTGTTGTaGCTGGACACCGGCCGGCTT +
Preference number: 4 (lower is better)
Translates to: RPHSSVQQSSRTVPKPLWQGTLL*LDTGRL
Trigger: AAGCCGGCCGGTGTCCAGGCACAACAGAGTCCCCTG...CCACAGAGGCTTCGGGACGGTCCTGCTGGACTGCTGGACGCTGCTGTGGGGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR GCA 90 bp CGTCTGCCCACTGAGAACACTGTTAGTGCGGAGGGATCCACAGGAGGGGAGAGCGCAGGGCCCAAGGGGTaGCCAGGCGTCTGCCCACTG +
Preference number: 4 (lower is better)
Translates to: RLPTENTVSAEGSTGGESAGPKG*PGVCPL
Trigger: CAGTGGGCAGACGCCTGGGCACCCCTTGGGCCCTGC...GCTCTCCCCTCCTGTGGATCCCTCCGCACTAACAGTGTTCTCAGTGGGCAGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR GCA 90 bp GGTAGAAAGAACGCCAGAAAGGTGGGTCTGTGTGTTCTGGGGTGCGTGGGGCCCGCAGGGCCCAAGGGGTaGCCAGGCGTCTGCCCACTG +
Preference number: 4 (lower is better)
Translates to: GRKNARKVGLCVLGCVGPAGPKG*PGVCPL
Trigger: CAGTGGGCAGACGCCTGGGCACCCCTTGGGCCCTGC...GGGCCCCACGCACCCCAGAACACACAGACCCACCTTTCTGGCGTTCTTTCTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR GCA 90 bp CGTCTGCCCACTGAGAACACTGTTAGTGCGGAGGGATCCACAGGAGGGGAGAGCCCTGCGCCATGGCCATaGTGGGCAGGGCCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: RLPTENTVSAEGSTGGESPAPWP*WAGPKG
Trigger: CCCCTTGGGCCCTGCCCAGCATGGCCATGGCGCAGG...GCTCTCCCCTCCTGTGGATCCCTCCGCACTAACAGTGTTCTCAGTGGGCAGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp CGTCTGCCCACTGAGAACACTGTTAGTGCGGAGGGATCCACAGGAGGGGAGAGCCCTGCGGGCCTCGTCTaGGGGTGGCTGCATCGGGCT +
Preference number: 4 (lower is better)
Translates to: RLPTENTVSAEGSTGGESPAGLV*GWLHRA
Trigger: AGCCCGATGCAGCCACCCCCAGACGAGGCCCGCAGG...GCTCTCCCCTCCTGTGGATCCCTCCGCACTAACAGTGTTCTCAGTGGGCAGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp AGACCCCACAGCAGCGTCCAGCAGTCCAGCAGGACCGTCCCGAAGCCTCTGTGGATCCGATCCCCGAGGTaGCCGCCCACAACCTGTGTC +
Preference number: 4 (lower is better)
Translates to: RPHSSVQQSSRTVPKPLWIRSPR*PPTTCV
Trigger: GACACAGGTTGTGGGCGGCCACCTCGGGGATCGGAT...CCACAGAGGCTTCGGGACGGTCCTGCTGGACTGCTGGACGCTGCTGTGGGGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR CCA 90 bp GGACCGTCCCGAAGCCTCTGTGGGGGTGATGCTCTAGGCTGTACCCATGGTGCCGGGGAGGCTGCAGCCTaGTGCCAGCCTCACATTGGC +
Preference number: 4 (lower is better)
Translates to: GPSRSLCGGDALGCTHGAGEAAA*CQPHIG
Trigger: GCCAATGTGAGGCTGGCACCAGGCTGCAGCCTCCCC...GGCACCATGGGTACAGCCTAGAGCATCACCCCCACAGAGGCTTCGGGACGGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR CCA 90 bp CCCACTGAGAACACTGTTAGTGCGGAGGGATCCACAGGAGGGGAGAGCGGCGCCCTGACTGGGAGCTGCTaGCTAGGGGTGGGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: PTENTVSAEGSTGGESGALTGSC*LGVGGG
Trigger: GCCTCCACCCACCCCTAGCCAGCAGCTCCCAGTCAG...GGCGCCGCTCTCCCCTCCTGTGGATCCCTCCGCACTAACAGTGTTCTCAGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp TCCCGAAGCCTCTGTGGGGGTGATGCTCTAGGCTGTACCCATGGTGCCACAGGGTCGGGCCTGGACCACTaGGTGTCCCCGGCCATGTCC +
Preference number: 4 (lower is better)
Translates to: SRSLCGGDALGCTHGATGSGLDH*VSPAMS
Trigger: GGACATGGCCGGGGACACCCAGTGGTCCAGGCCCGA...CCCTGTGGCACCATGGGTACAGCCTAGAGCATCACCCCCACAGAGGCTTCGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR TCA 90 bp AGACCCCACAGCAGCGTCCAGCAGTCCAGCAGGACCGTCCCGAAGCCTCTGTGGTGCGTGAGAAGGTCATaGAGGCCAGGTGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: RPHSSVQQSSRTVPKPLWCVRRS*RPGGHC
Trigger: GCAGTGCCCACCTGGCCTTCATGACCTTCTCACGCA...CCACAGAGGCTTCGGGACGGTCCTGCTGGACTGCTGGACGCTGCTGTGGGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR TCA 90 bp AGGAGACACAGAGACTCTGAGGTCGTGTCTCGAGGGTGGCTACCTGGGGAGGCTCACAGGCCCCACCTCTaGACTCAGCCGCAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: RRHRDSEVVSRGWLPGEAHRPHL*TQPQVG
Trigger: GCCCACCTGCGGCTGAGTTCAGAGGTGGGGCCTGTG...AGCCTCCCCAGGTAGCCACCCTCGAGACACGACCTCAGAGTCTCTGTGTCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR GCA 90 bp ATCACCAGGCCTGGGAAAGCCATGCGGGTTCGAGAGCCTGCGCCATGGCCATGCCGGTGCAGATGGGCATaGTGGAGCGGGCGCAGTACA +
Preference number: 4 (lower is better)
Translates to: ITRPGKAMRVREPAPWPCRCRWA*WSGRST
Trigger: TGTACTGCGCCCGCTCCAGCATGCCCATCTGCACCG...GCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTCCCAGGCCTGGTGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR GCA 90 bp ATCACCAGGCCTGGGAAAGCCATGCGGGTTCGAGAGCCTGCGCCATGGCCATGCCACACCCACGACACCTaGCAAGGCCCCGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: ITRPGKAMRVREPAPWPCHTHDT*QGPGCV
Trigger: AACACAGCCGGGGCCTTGGCAGGTGTCGTGGGTGTG...GCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTCCCAGGCCTGGTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR GCA 90 bp GGTAGAAAGAACGCCAGAAAGGTGGGTCTGTGTGTTCTGGGGTGCGTGGGGCCCCCTGTGTCCTGGGGCTaGTGGCGCCTGGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GRKNARKVGLCVLGCVGPPVSWG*WRLGPW
Trigger: CCAAGGACCCAGGCGCCAGCAGCCCCAGGACACAGG...GGGCCCCACGCACCCCAGAACACACAGACCCACCTTTCTGGCGTTCTTTCTACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR GCA 90 bp CGTCTGCCCACTGAGAACACTGTTAGTGCGGAGGGATCCACAGGAGGGGAGAGCCCTGTGTCCTGGGGCTaGTGGCGCCTGGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: RLPTENTVSAEGSTGGESPVSWG*WRLGPW
Trigger: CCAAGGACCCAGGCGCCAGCAGCCCCAGGACACAGG...GCTCTCCCCTCCTGTGGATCCCTCCGCACTAACAGTGTTCTCAGTGGGCAGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp CGTCTGCCCACTGAGAACACTGTTAGTGCGGAGGGATCCACAGGAGGGGAGAGCGGTGCTCAGACGGCGTaGGCACAGCTGTGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: RLPTENTVSAEGSTGGESGAQTA*AQLCPG
Trigger: CCCGGGACACAGCTGTGCCCACGCCGTCTGAGCACC...GCTCTCCCCTCCTGTGGATCCCTCCGCACTAACAGTGTTCTCAGTGGGCAGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp GTGGTGGGAATGAGGCTGCGCCTACTAACAATAACCCCACCCACCCTGACGGCCGGCCTCGTCTGGGGGTaGCTGCATCGGGCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: VVGMRLRLLTITPPTLTAGLVWG*LHRAWG
Trigger: ACCCCAAGCCCGATGCAGCCACCCCCAGACGAGGCC...GGCCGTCAGGGTGGGTGGGGTTATTGTTAGTAGGCGCAGCCTCATTCCCACCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp GTGGTGGGAATGAGGCTGCGCCTACTAACAATAACCCCACCCACCCTGACGGCCCCTGGCACTCGGGCCTaGCCTCCTGACTGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: VVGMRLRLLTITPPTLTAPGTRA*PPDCPG
Trigger: GCCAGGACAGTCAGGAGGCCAGGCCCGAGTGCCAGG...GGCCGTCAGGGTGGGTGGGGTTATTGTTAGTAGGCGCAGCCTCATTCCCACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370349.7
CDS-3UTR CCA 90 bp TCACCAGGCCTGGGAAAGCCATGCGGGTTCGAGAGCCTGCGCCATGGCCATGCTATCCGATCCCCGAGGTaGCCGCCCACAACCTGTGTC +
Preference number: 4 (lower is better)
Translates to: SPGLGKPCGFESLRHGHAIRSPR*PPTTCV
Trigger: GACACAGGTTGTGGGCGGCCACCTCGGGGATCGGAT...AGCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTCCCAGGCCTGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp CGCTGCAGGAGGCTTGCGGAGAACACGGCGACCGAGGGAGGTTTGGCGGGAACCCAGAAGCTGGAGGTGTaGCCCAGGCACAGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: RCRRLAENTATEGGLAGTQKLEV*PRHRAK
Trigger: CTTTGCTCTGTGCCTGGGCCACACCTCCAGCTTCTG...GGTTCCCGCCAAACCTCCCTCGGTCGCCGTGTTCTCCGCAAGCCTCCTGCAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp CGTCTGCCCACTGAGAACACTGTTAGTGCGGAGGGATCCACAGGAGGGGAGAGCGGGGCTGCTGGCGCCTaGGTCCTTGGAGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RLPTENTVSAEGSTGGESGAAGA*VLGEAV
Trigger: CACAGCCTCTCCAAGGACCCAGGCGCCAGCAGCCCC...GCTCTCCCCTCCTGTGGATCCCTCCGCACTAACAGTGTTCTCAGTGGGCAGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp GTGGTGGGAATGAGGCTGCGCCTACTAACAATAACCCCACCCACCCTGACGGCCGGGGCTGCTGGCGCCTaGGTCCTTGGAGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: VVGMRLRLLTITPPTLTAGAAGA*VLGEAV
Trigger: CACAGCCTCTCCAAGGACCCAGGCGCCAGCAGCCCC...GGCCGTCAGGGTGGGTGGGGTTATTGTTAGTAGGCGCAGCCTCATTCCCACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp GAAAGCCATGCGGGTTCGAGAGCCTGCGCCATGGCCATGCTGGGCAGGGCCCAAGAACTCAGCCGCAGGTaGGCTTCCTGGGCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: ESHAGSRACAMAMLGRAQELSRR*ASWAWL
Trigger: AAGCCAAGCCCAGGAAGCCCACCTGCGGCTGAGTTC...TTGGGCCCTGCCCAGCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370351.9
3UTR CAA 72 bp AGGAGGCTTGCGGAGAACACGGCGACCGAGGGAGGTTaGGCGGGAACCACGCGGAACAGATCGTGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: RRLAENTATEGG*AGTTRNRSWWE
Trigger: TTCCCACCACGATCTGTTCCGCGTGGTTCCCGCCAAACCTCCCTCGGTCGCCGTGTTCTCCGCAAGCCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR TCA 90 bp CCCACTGAGAACACTGTTAGTGCGGAGGGATCCACAGGAGGGGAGAGCGGCGCCTGCGTGAGAAGGTCATaGAGGCCAGGTGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: PTENTVSAEGSTGGESGACVRRS*RPGGHC
Trigger: GCAGTGCCCACCTGGCCTTCATGACCTTCTCACGCA...GGCGCCGCTCTCCCCTCCTGTGGATCCCTCCGCACTAACAGTGTTCTCAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR TCA 90 bp CGCTGCAGGAGGCTTGCGGAGAACACGGCGACCGAGGGAGGTTTGGCGGGAACCCTTGGAGCAAGCCCATaGGGATGCGTGAGAAGGTCA +
Preference number: 4 (lower is better)
Translates to: RCRRLAENTATEGGLAGTLGASP*GCVRRS
Trigger: TGACCTTCTCACGCATCCTCATGGGCTTGCTCCAAG...GGTTCCCGCCAAACCTCCCTCGGTCGCCGTGTTCTCCGCAAGCCTCCTGCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR TCA 90 bp AGACCCCACAGCAGCGTCCAGCAGTCCAGCAGGACCGTCCCGAAGCCTCTGTGGGAGGCCGATGGAGGCTaGTGCAAAGACCACAGACTC +
Preference number: 4 (lower is better)
Translates to: RPHSSVQQSSRTVPKPLWEADGG*CKDHRL
Trigger: GAGTCTGTGGTCTTTGCATCAGCCTCCATCGGCCTC...CCACAGAGGCTTCGGGACGGTCCTGCTGGACTGCTGGACGCTGCTGTGGGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR GCA 90 bp CTGGGCTTGGCTTCCTGGCCTCCAGACAGCAACTGCCAGGCTTCTGGAAGCCCCGGCTCATGGAGACGGTaGAGATGGGCATGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LGLASWPPDSNCQASGSPGSWRR*RWACWS
Trigger: GCTCCAGCATGCCCATCTGCACCGTCTCCATGAGCC...GGGGCTTCCAGAAGCCTGGCAGTTGCTGTCTGGAGGCCAGGAAGCCAAGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR GCA 90 bp GTGGTGGGAATGAGGCTGCGCCTACTAACAATAACCCCACCCACCCTGACGGCCCTGGGAGACGACGGCTaGCCAGACAGCAGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: VVGMRLRLLTITPPTLTALGDDG*PDSRLP
Trigger: CGGAAGCCTGCTGTCTGGGCAGCCGTCGTCTCCCAG...GGCCGTCAGGGTGGGTGGGGTTATTGTTAGTAGGCGCAGCCTCATTCCCACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR GCA 90 bp ACATCGCTGTCATCTGTGGACACGCAGGACCCCTGGCGGCAAAGGAACCCCGAAGCGCTGCAGGAGGCTTaGGGAGAACACGGCGACCGA +
Preference number: 4 (lower is better)
Translates to: TSLSSVDTQDPWRQRNPEALQEA*GEHGDR
Trigger: TCGGTCGCCGTGTTCTCCGCAAGCCTCCTGCAGCGC...TTCGGGGTTCCTTTGCCGCCAGGGGTCCTGCGTGTCCACAGATGACAGCGATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR GCA 90 bp GGTGGACAGCTGATAGCAGGGTACATCGCTGTCATCTGTGGACACGCAGGACCCGCGGGTTCGAGAGCCTaGGCCATGGCCATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GGQLIAGYIAVICGHAGPAGSRA*AMAMLG
Trigger: GCCCAGCATGGCCATGGCGCAGGCTCTCGAACCCGC...GGGTCCTGCGTGTCCACAGATGACAGCGATGTACCCTGCTATCAGCTGTCCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR GCA 90 bp TTAAGCATCCTACAGTGTGCAGGACAGCTCCCACCAAGGAGGACAGCCCGCCAGCGCCCCCGAGGAAGGTaGCAACCGTCCCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LSILQCAGQLPPRRTARQRPRGR*QPSLES
Trigger: GCTCTCCAGGGACGGTTGGCACCTTCCTCGGGGGCG...CTGGCGGGCTGTCCTCCTTGGTGGGAGCTGTCCTGCACACTGTAGGATGCTTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp AGGAGACACAGAGACTCTGAGGTCGTGTCTCGAGGGTGGCTACCTGGGGAGGCTCAGGGTGGTTCCACCTaGACCACTGGGTGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: RRHRDSEVVSRGWLPGEAQGGST*TTGCPR
Trigger: CCGGGGACACCCAGTGGTCCAGGTGGAACCACCCTG...AGCCTCCCCAGGTAGCCACCCTCGAGACACGACCTCAGAGTCTCTGTGTCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370349.7
CDS-3UTR CCA 90 bp GGTAGAAAGAACGCCAGAAAGGTGGGTCTGTGTGTTCTGGGGTGCGTGGGGCCCTGGCGCCTGGGTCCTTaGAGAGGCTGTGGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: GRKNARKVGLCVLGCVGPWRLGP*RGCGVG
Trigger: CCCAACCCCACAGCCTCTCCAAGGACCCAGGCGCCA...GGGCCCCACGCACCCCAGAACACACAGACCCACCTTTCTGGCGTTCTTTCTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp TTAAGCATCCTACAGTGTGCAGGACAGCTCCCACCAAGGAGGACAGCCCGCCAGTGGGTCTGTGTGTTCTaGGGTGCGTGGGGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: LSILQCAGQLPPRRTARQWVCVF*GAWGPP
Trigger: GGGCGGGCCCCACGCACCCCAGAACACACAGACCCA...CTGGCGGGCTGTCCTCCTTGGTGGGAGCTGTCCTGCACACTGTAGGATGCTTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp TGCGGAGGGATCCACAGGAGGGGAGAGCGGCGCCAGGGTCCCGGACACAGGCAAAGAACGCCAGAAAGGTaGGTCTGTGTGTTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: CGGIHRRGERRQGPGHRQRTPER*VCVFWG
Trigger: ACCCCAGAACACACAGACCCACCTTTCTGGCGTTCT...TTGCCTGTGTCCGGGACCCTGGCGCCGCTCTCCCCTCCTGTGGATCCCTCCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp AGGCTTCTAGGAGACACAGAGACTCTGAGGTCGTGTCTCGAGGGTGGCTACCTGCCTGGCACTCGGGCCTaGACCACTGGGTGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: RLLGDTETLRSCLEGGYLPGTRA*TTGCPR
Trigger: CCGGGGACACCCAGTGGTCCAGGCCCGAGTGCCAGG...CAGGTAGCCACCCTCGAGACACGACCTCAGAGTCTCTGTGTCTCCTAGAAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR TCA 90 bp TCACCAGGCCTGGGAAAGCCATGCGGGTTCGAGAGCCTGCGCCATGGCCATGCTAGGCTGACAGCAGGATaGCCTTCTCACCCCCAATCC +
Preference number: 4 (lower is better)
Translates to: SPGLGKPCGFESLRHGHARLTAG*PSHPQS
Trigger: GGATTGGGGGTGAGAAGGTCATCCTGCTGTCAGCCT...AGCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTCCCAGGCCTGGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR TCA 90 bp GAAAGCCATGCGGGTTCGAGAGCCTGCGCCATGGCCATGCTGGGCAGGGCCCAAACCAAGGAACCACGTTaGAGATCCAGCCCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: ESHAGSRACAMAMLGRAQTKEPR*RSSPWR
Trigger: ACGCCAAGGGCTGGATCTTCAACGTGGTTCCTTGGT...TTGGGCCCTGCCCAGCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR TCA 90 bp TGCGGAGGGATCCACAGGAGGGGAGAGCGGCGCCAGGGTCCCGGACACAGGCAACCTGGGATTCTCCTTTaGCCTGATTCCAACGTGTCA +
Preference number: 4 (lower is better)
Translates to: CGGIHRRGERRQGPGHRQPGILL*PDSNVS
Trigger: TGACACGTTGGAATCAGGTCAAAGGAGAATCCCAGG...TTGCCTGTGTCCGGGACCCTGGCGCCGCTCTCCCCTCCTGTGGATCCCTCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR GCA 90 bp GGTGGACAGCTGATAGCAGGGTACATCGCTGTCATCTGTGGACACGCAGGACCCGCATCGGGCTTGGGGTaGTCAGACGGCGTGGGCACA +
Preference number: 4 (lower is better)
Translates to: GGQLIAGYIAVICGHAGPASGLG*SDGVGT
Trigger: TGTGCCCACGCCGTCTGAGCACCCCAAGCCCGATGC...GGGTCCTGCGTGTCCACAGATGACAGCGATGTACCCTGCTATCAGCTGTCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR GCA 90 bp GTGGTGGGAATGAGGCTGCGCCTACTAACAATAACCCCACCCACCCTGACGGCCCAGGGGACTCTGTTGTaGCTGGACACCGGCCGGCTT +
Preference number: 4 (lower is better)
Translates to: VVGMRLRLLTITPPTLTAQGTLL*LDTGRL
Trigger: AAGCCGGCCGGTGTCCAGGCACAACAGAGTCCCCTG...GGCCGTCAGGGTGGGTGGGGTTATTGTTAGTAGGCGCAGCCTCATTCCCACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR GCA 90 bp TTAAGCATCCTACAGTGTGCAGGACAGCTCCCACCAAGGAGGACAGCCCGCCAGCTGGGAGACGACGGCTaGCCAGACAGCAGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: LSILQCAGQLPPRRTARQLGDDG*PDSRLP
Trigger: CGGAAGCCTGCTGTCTGGGCAGCCGTCGTCTCCCAG...CTGGCGGGCTGTCCTCCTTGGTGGGAGCTGTCCTGCACACTGTAGGATGCTTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR GCA 90 bp GGTGGACAGCTGATAGCAGGGTACATCGCTGTCATCTGTGGACACGCAGGACCCTTGGCAGGCGGGCGCTaGAGGAGGCTTGCGGAGAAC +
Preference number: 4 (lower is better)
Translates to: GGQLIAGYIAVICGHAGPLAGGR*RRLAEN
Trigger: GTTCTCCGCAAGCCTCCTGCAGCGCCCGCCTGCCAA...GGGTCCTGCGTGTCCACAGATGACAGCGATGTACCCTGCTATCAGCTGTCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR CCA 90 bp ACAGCAATTCATTCACAACGCACAGGCCCCACCTCTGAACTCAGCCGCAGGTGGGGTGCTCAGACGGCGTaGGCACAGCTGTGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: TAIHSQRTGPTSELSRRWGAQTA*AQLCPG
Trigger: CCCGGGACACAGCTGTGCCCACGCCGTCTGAGCACC...CCACCTGCGGCTGAGTTCAGAGGTGGGGCCTGTGCGTTGTGAATGAATTGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR CCA 90 bp TCACCAGGCCTGGGAAAGCCATGCGGGTTCGAGAGCCTGCGCCATGGCCATGCTTGCAGATGGGCATGCTaGAGCGGGCGCAGTACAGAA +
Preference number: 4 (lower is better)
Translates to: SPGLGKPCGFESLRHGHACRWAC*SGRSTE
Trigger: TTCTGTACTGCGCCCGCTCCAGCATGCCCATCTGCA...AGCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTCCCAGGCCTGGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp TCACCAGGCCTGGGAAAGCCATGCGGGTTCGAGAGCCTGCGCCATGGCCATGCTCGAAGTCCTGGCTCATaGAGACGGTGCAGATGGGCA +
Preference number: 4 (lower is better)
Translates to: SPGLGKPCGFESLRHGHARSPGS*RRCRWA
Trigger: TGCCCATCTGCACCGTCTCCATGAGCCAGGACTTCG...AGCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTCCCAGGCCTGGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp GGACAGCTGATAGCAGGGTACATCGCTGTCATCTGTGGACACGCAGGACCCCTGTGGGCACTGCTCAGGTaGGCGAGCAGTGGGGTGACG +
Preference number: 4 (lower is better)
Translates to: GQLIAGYIAVICGHAGPLWALLR*ASSGVT
Trigger: CGTCACCCCACTGCTCGCCCACCTGAGCAGTGCCCA...CAGGGGTCCTGCGTGTCCACAGATGACAGCGATGTACCCTGCTATCAGCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR CCA 90 bp GTGGTGGGAATGAGGCTGCGCCTACTAACAATAACCCCACCCACCCTGACGGCCCGACCGAGGGAGGTTTaGCGGGAACCACGCGGAACA +
Preference number: 4 (lower is better)
Translates to: VVGMRLRLLTITPPTLTARPREV*REPRGT
Trigger: TGTTCCGCGTGGTTCCCGCCAAACCTCCCTCGGTCG...GGCCGTCAGGGTGGGTGGGGTTATTGTTAGTAGGCGCAGCCTCATTCCCACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp ATCACCAGGCCTGGGAAAGCCATGCGGGTTCGAGAGCCTGCGCCATGGCCATGCCTGGCTAGGGGTGGGTaGAGGCCAGGGATACCTTTA +
Preference number: 4 (lower is better)
Translates to: ITRPGKAMRVREPAPWPCLARGG*RPGIPL
Trigger: TAAAGGTATCCCTGGCCTCCACCCACCCCTAGCCAG...GCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTCCCAGGCCTGGTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp TGCGGAGGGATCCACAGGAGGGGAGAGCGGCGCCAGGGTCCCGGACACAGGCAAGTCTGGAGACATTTCTaGCTGTTGTCTGACTGGGAG +
Preference number: 4 (lower is better)
Translates to: CGGIHRRGERRQGPGHRQVWRHF*LLSDWE
Trigger: CTCCCAGTCAGACAACAGCCAGAAATGTCTCCAGAC...TTGCCTGTGTCCGGGACCCTGGCGCCGCTCTCCCCTCCTGTGGATCCCTCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp TCACCAGGCCTGGGAAAGCCATGCGGGTTCGAGAGCCTGCGCCATGGCCATGCTGCTACCTGGGGAGGCTaGGCAGAGTCTGGAGACATT +
Preference number: 4 (lower is better)
Translates to: SPGLGKPCGFESLRHGHAATWGG*AESGDI
Trigger: AATGTCTCCAGACTCTGCCCAGCCTCCCCAGGTAGC...AGCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTCCCAGGCCTGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp ACAGATCGTGGTGGGAATGAGGCTGCGCCTACTAACAATAACCCCACCCACCCTGTGTTCTGGGGTGCGTaGGGCCCGCCCCCGAGGAAG +
Preference number: 4 (lower is better)
Translates to: TDRGGNEAAPTNNNPTHPVFWGA*GPPPRK
Trigger: CTTCCTCGGGGGCGGGCCCCACGCACCCCAGAACAC...AGGGTGGGTGGGGTTATTGTTAGTAGGCGCAGCCTCATTCCCACCACGATCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR CAA 72 bp GGGAGGCTGGGCAGAGTCTGGAGACATTTCTGGCTGTaGTCTGACTGGGAGCTGCTGGCTAGGGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: GRLGRVWRHFWL*SDWELLARGGW
Trigger: CCACCCACCCCTAGCCAGCAGCTCCCAGTCAGACAACAGCCAGAAATGTCTCCAGACTCTGCCCAGCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR TCA 90 bp GTGGTGGGAATGAGGCTGCGCCTACTAACAATAACCCCACCCACCCTGACGGCCGCCAGGAGAGGAGGATaGAGAAGGAGCAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: VVGMRLRLLTITPPTLTAARRGG*RRSRLQ
Trigger: CTGCAGCCTGCTCCTTCTTCATCCTCCTCTCCTGGC...GGCCGTCAGGGTGGGTGGGGTTATTGTTAGTAGGCGCAGCCTCATTCCCACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR TCA 90 bp CCCACTGAGAACACTGTTAGTGCGGAGGGATCCACAGGAGGGGAGAGCGGCGCCACCAAGGAACCACGTTaGAGATCCAGCCCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: PTENTVSAEGSTGGESGATKEPR*RSSPWR
Trigger: ACGCCAAGGGCTGGATCTTCAACGTGGTTCCTTGGT...GGCGCCGCTCTCCCCTCCTGTGGATCCCTCCGCACTAACAGTGTTCTCAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR GCA 90 bp GAACCACGCGGAACAGATCGTGGTGGGAATGAGGCTGCGCCTACTAACAATAACGCTGTGTCCCGGGGCTaGCTCCCAGCCCAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: EPRGTDRGGNEAAPTNNNAVSRG*LPAQAD
Trigger: GTCAGCCTGGGCTGGGAGGCAGCCCCGGGACACAGC...GTTATTGTTAGTAGGCGCAGCCTCATTCCCACCACGATCTGTTCCGCGTGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR GCA 90 bp TGCGGAGGGATCCACAGGAGGGGAGAGCGGCGCCAGGGTCCCGGACACAGGCAACGGAGAAATAGAAGATaGTCTGCCAGCCGTACCATT +
Preference number: 4 (lower is better)
Translates to: CGGIHRRGERRQGPGHRQRRNRR*SASRTI
Trigger: AATGGTACGGCTGGCAGAGCATCTTCTATTTCTCCG...TTGCCTGTGTCCGGGACCCTGGCGCCGCTCTCCCCTCCTGTGGATCCCTCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR GCA 90 bp AGGCCAGGGATACCTTTAAGCATCCTACAGTGTGCAGGACAGCTCCCACCAAGGCAGCGTCCCCGTCCATaGCTGGCACTCGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: RPGIPLSILQCAGQLPPRQRPRP*LALGPG
Trigger: TCCAGGCCCGAGTGCCAGGCATGGACGGGGACGCTG...CCTTGGTGGGAGCTGTCCTGCACACTGTAGGATGCTTAAAGGTATCCCTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR GCA 90 bp ACATCGCTGTCATCTGTGGACACGCAGGACCCCTGGCGGCAAAGGAACCCCGAAAGGCTGTACCCATGGTaGCACAGGGTTGGGCTGACC +
Preference number: 4 (lower is better)
Translates to: TSLSSVDTQDPWRQRNPERLYPW*HRVGLT
Trigger: GGTCAGCCCAACCCTGTGGCACCATGGGTACAGCCT...TTCGGGGTTCCTTTGCCGCCAGGGGTCCTGCGTGTCCACAGATGACAGCGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR CCA 90 bp CCCACTGAGAACACTGTTAGTGCGGAGGGATCCACAGGAGGGGAGAGCGGCGCCCATGCATACACAGGGTaGTTCCACCTGGACCACTGG +
Preference number: 4 (lower is better)
Translates to: PTENTVSAEGSTGGESGAHAYTG*FHLDHW
Trigger: CCAGTGGTCCAGGTGGAACCACCCTGTGTATGCATG...GGCGCCGCTCTCCCCTCCTGTGGATCCCTCCGCACTAACAGTGTTCTCAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370349.7
CDS-3UTR CCA 90 bp GGCAAAGGAACCCCGAAACCCAGCCTGGCTCTGCTGGCATGCTCATTTCAACACCAGGTGGGCGAGCAGTaGGGTGACGGCCGTGATGGA +
Preference number: 4 (lower is better)
Translates to: GKGTPKPSLALLACSFQHQVGEQ*GDGRDG
Trigger: TCCATCACGGCCGTCACCCCACTGCTCGCCCACCTG...GTGTTGAAATGAGCATGCCAGCAGAGCCAGGCTGGGTTTCGGGGTTCCTTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR CCA 90 bp AGGCTTCTAGGAGACACAGAGACTCTGAGGTCGTGTCTCGAGGGTGGCTACCTGAGCAGCGTCCCAAACTaGGAGCCGGCGCCCACGATG +
Preference number: 4 (lower is better)
Translates to: RLLGDTETLRSCLEGGYLSSVPN*EPAPTM
Trigger: CATCGTGGGCGCCGGCTCCCAGTTTGGGACGCTGCT...CAGGTAGCCACCCTCGAGACACGACCTCAGAGTCTCTGTGTCTCCTAGAAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp CGCTGCAGGAGGCTTGCGGAGAACACGGCGACCGAGGGAGGTTTGGCGGGAACCCTTCAGGCTCCACAGTaGTTTGTGTTCCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: RCRRLAENTATEGGLAGTLQAPQ*FVFLSA
Trigger: AGCAGAGAGGAACACAAACCACTGTGGAGCCTGAAG...GGTTCCCGCCAAACCTCCCTCGGTCGCCGTGTTCTCCGCAAGCCTCCTGCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp AGGCTTCTAGGAGACACAGAGACTCTGAGGTCGTGTCTCGAGGGTGGCTACCTGGTCGTGTCTCGAGGGTaGCTACCTGGGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RLLGDTETLRSCLEGGYLVVSRG*LPGEAG
Trigger: CCCAGCCTCCCCAGGTAGCCACCCTCGAGACACGAC...CAGGTAGCCACCCTCGAGACACGACCTCAGAGTCTCTGTGTCTCCTAGAAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp GGACAGCTGATAGCAGGGTACATCGCTGTCATCTGTGGACACGCAGGACCCCTGACCCACCCACTGCCCTaGGGGTCTCTGTCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: GQLIAGYIAVICGHAGPLTHPLP*GSLSGF
Trigger: GAAGCCTGACAGAGACCCCCAGGGCAGTGGGTGGGT...CAGGGGTCCTGCGTGTCCACAGATGACAGCGATGTACCCTGCTATCAGCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR CCA 90 bp GATACCTTTAAGCATCCTACAGTGTGCAGGACAGCTCCCACCAAGGAGGACAGCGCGCCATGGCCATGCTaGGCAGGGCCCAAGGGGTGC +
Preference number: 4 (lower is better)
Translates to: DTFKHPTVCRTAPTKEDSAPWPC*AGPKGC
Trigger: GCACCCCTTGGGCCCTGCCCAGCATGGCCATGGCGC...GCTGTCCTCCTTGGTGGGAGCTGTCCTGCACACTGTAGGATGCTTAAAGGTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp CGTCTGCCCACTGAGAACACTGTTAGTGCGGAGGGATCCACAGGAGGGGAGAGCGGTGCCAACCGTCCCTaGAGAGCAGAATCACCAGGC +
Preference number: 4 (lower is better)
Translates to: RLPTENTVSAEGSTGGESGANRP*RAESPG
Trigger: GCCTGGTGATTCTGCTCTCCAGGGACGGTTGGCACC...GCTCTCCCCTCCTGTGGATCCCTCCGCACTAACAGTGTTCTCAGTGGGCAGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp GGCACTGGTCCCAGAGCAGCCACACTTACGGTCGAGACACAAAGTGGAATGGGGGACACGCAGGACCCCTaGCGGCAAAGGAACCCCGAA +
Preference number: 4 (lower is better)
Translates to: GTGPRAATLTVETQSGMGDTQDP*RQRNPE
Trigger: TTCGGGGTTCCTTTGCCGCCAGGGGTCCTGCGTGTC...CCCCATTCCACTTTGTGTCTCGACCGTAAGTGTGGCTGCTCTGGGACCAGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR CCA 90 bp GGACAGCTGATAGCAGGGTACATCGCTGTCATCTGTGGACACGCAGGACCCCTGGGGGGCCCCACATCTTaGGAAAGCTGGGTGGACAGC +
Preference number: 4 (lower is better)
Translates to: GQLIAGYIAVICGHAGPLGGPTS*ESWVDS
Trigger: GCTGTCCACCCAGCTTTCCCAAGATGTGGGGCCCCC...CAGGGGTCCTGCGTGTCCACAGATGACAGCGATGTACCCTGCTATCAGCTGTCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR GCA 90 bp GGACAGCTGATAGCAGGGTACATCGCTGTCATCTGTGGACACGCAGGACCCCTGAGTACAGAAGGCATGTaGCCAGCAGCAGCGTCCCCG +
Preference number: 4 (lower is better)
Translates to: GQLIAGYIAVICGHAGPLSTEGM*PAAASP
Trigger: CGGGGACGCTGCTGCTGGGCACATGCCTTCTGTACT...CAGGGGTCCTGCGTGTCCACAGATGACAGCGATGTACCCTGCTATCAGCTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR GCA 90 bp AGGCTTCTAGGAGACACAGAGACTCTGAGGTCGTGTCTCGAGGGTGGCTACCTGTGGGATTGGGGAGGCTaGAGCCTGGTGCCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: RLLGDTETLRSCLEGGYLWDWGG*SLVPAS
Trigger: TGAGGCTGGCACCAGGCTGCAGCCTCCCCAATCCCA...CAGGTAGCCACCCTCGAGACACGACCTCAGAGTCTCTGTGTCTCCTAGAAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp AGGCCAGGGATACCTTTAAGCATCCTACAGTGTGCAGGACAGCTCCCACCAAGGTGGAGACGGTGCAGATaGGCATGCTGGAGCGGGCGC +
Preference number: 4 (lower is better)
Translates to: RPGIPLSILQCAGQLPPRWRRCR*ACWSGR
Trigger: GCGCCCGCTCCAGCATGCCCATCTGCACCGTCTCCA...CCTTGGTGGGAGCTGTCCTGCACACTGTAGGATGCTTAAAGGTATCCCTGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp AGGCTTCTAGGAGACACAGAGACTCTGAGGTCGTGTCTCGAGGGTGGCTACCTGGGACTCTGTTGTGCCTaGACACCGGCCGGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: RLLGDTETLRSCLEGGYLGLCCA*TPAGFG
Trigger: CCCAAAGCCGGCCGGTGTCCAGGCACAACAGAGTCC...CAGGTAGCCACCCTCGAGACACGACCTCAGAGTCTCTGTGTCTCCTAGAAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp CGTCTGCCCACTGAGAACACTGTTAGTGCGGAGGGATCCACAGGAGGGGAGAGCCAGACTCACAGAAGCTaGAGGTGTGGCCCAGGCACA +
Preference number: 4 (lower is better)
Translates to: RLPTENTVSAEGSTGGESQTHRS*RCGPGT
Trigger: TGTGCCTGGGCCACACCTCCAGCTTCTGTGAGTCTG...GCTCTCCCCTCCTGTGGATCCCTCCGCACTAACAGTGTTCTCAGTGGGCAGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp ATCACCAGGCCTGGGAAAGCCATGCGGGTTCGAGAGCCTGCGCCATGGCCATGCACAGAAATGCCACTGTaGTTGAAGGTCTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: ITRPGKAMRVREPAPWPCTEMPL*LKVWRP
Trigger: CGGCCTCCAGACCTTCAACCACAGTGGCATTTCTGT...GCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTCCCAGGCCTGGTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp GTGGTGGGAATGAGGCTGCGCCTACTAACAATAACCCCACCCACCCTGACGGCCAGGCCCCGGCTGTGTTaGCCACACCAAACAGAAAGC +
Preference number: 4 (lower is better)
Translates to: VVGMRLRLLTITPPTLTARPRLC*PHQTES
Trigger: GCTTTCTGTTTGGTGTGGCCAACACAGCCGGGGCCT...GGCCGTCAGGGTGGGTGGGGTTATTGTTAGTAGGCGCAGCCTCATTCCCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp CCCACTGAGAACACTGTTAGTGCGGAGGGATCCACAGGAGGGGAGAGCGGCGCCCTCGTGTGTCTGACATaGAGTGACCAAGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: PTENTVSAEGSTGGESGALVCLT*SDQVPH
Trigger: GTGTGGGACTTGGTCACTCCATGTCAGACACACGAG...GGCGCCGCTCTCCCCTCCTGTGGATCCCTCCGCACTAACAGTGTTCTCAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp ACAGATCGTGGTGGGAATGAGGCTGCGCCTACTAACAATAACCCCACCCACCCTAGAGAGCAGCGAGCCTaGTCTGGACCCAGGCCCACC +
Preference number: 4 (lower is better)
Translates to: TDRGGNEAAPTNNNPTHPREQRA*SGPRPT
Trigger: GGTGGGCCTGGGTCCAGACCAGGCTCGCTGCTCTCT...AGGGTGGGTGGGGTTATTGTTAGTAGGCGCAGCCTCATTCCCACCACGATCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp ACAGATCGTGGTGGGAATGAGGCTGCGCCTACTAACAATAACCCCACCCACCCTGGGGAGGCTGCAGCCTaGTGCCAGCCTCACATTGGC +
Preference number: 4 (lower is better)
Translates to: TDRGGNEAAPTNNNPTHPGEAAA*CQPHIG
Trigger: GCCAATGTGAGGCTGGCACCAGGCTGCAGCCTCCCC...AGGGTGGGTGGGGTTATTGTTAGTAGGCGCAGCCTCATTCCCACCACGATCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp AAACCACCAGCTCCTCAGGCAACGAAAAGGGAGGTAGAAAGAACGCCAGAAAGGGCGCCATGGCCATGCTaGGCAGGGCCCAAGGGGTGC +
Preference number: 4 (lower is better)
Translates to: KPPAPQATKREVERTPERAPWPC*AGPKGC
Trigger: GCACCCCTTGGGCCCTGCCCAGCATGGCCATGGCGC...CCTTTCTGGCGTTCTTTCTACCTCCCTTTTCGTTGCCTGAGGAGCTGGTGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp AAACCACCAGCTCCTCAGGCAACGAAAAGGGAGGTAGAAAGAACGCCAGAAAGGGTGTTCTGGGGTGCGTaGGGCCCGCCCCCGAGGAAG +
Preference number: 4 (lower is better)
Translates to: KPPAPQATKREVERTPERVFWGA*GPPPRK
Trigger: CTTCCTCGGGGGCGGGCCCCACGCACCCCAGAACAC...CCTTTCTGGCGTTCTTTCTACCTCCCTTTTCGTTGCCTGAGGAGCTGGTGGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR TCA 90 bp CTCTTCTTAAGGAGCTTCAGGCTCCACAGTGGTTTGTGTTCCTCTCTGCTCGTGTCGGGCCTGGCCTCCTaGCTGTCCTGGCGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: LFLRSFRLHSGLCSSLLVSGLAS*LSWRLL
Trigger: AAGCAGGCGCCAGGACAGTCAGGAGGCCAGGCCCGA...CACGAGCAGAGAGGAACACAAACCACTGTGGAGCCTGAAGCTCCTTAAGAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370349.7
CDS-3UTR TCA 90 bp ACAGATCGTGGTGGGAATGAGGCTGCGCCTACTAACAATAACCCCACCCACCCTCCCAGAAGAAGCTGCTaGGCACGATGCCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: TDRGGNEAAPTNNNPTHPPRRSC*ARCRPP
Trigger: AGGAGGCCGGCATCGTGCTCAGCAGCTTCTTCTGGG...AGGGTGGGTGGGGTTATTGTTAGTAGGCGCAGCCTCATTCCCACCACGATCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR TCA 90 bp ACATCGCTGTCATCTGTGGACACGCAGGACCCCTGGCGGCAAAGGAACCCCGAACAGAGAGAAACCCGCTaGATAGACTGGCCGGAATCG +
Preference number: 4 (lower is better)
Translates to: TSLSSVDTQDPWRQRNPEQRETR*IDWPES
Trigger: CGATTCCGGCCAGTCTATTCAGCGGGTTTCTCTCTG...TTCGGGGTTCCTTTGCCGCCAGGGGTCCTGCGTGTCCACAGATGACAGCGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR TCA 90 bp GGTAGAAAGAACGCCAGAAAGGTGGGTCTGTGTGTTCTGGGGTGCGTGGGGCCCCTCTGCTCGTGTGTCTaGCATGGAGTGACCAAGTCC +
Preference number: 4 (lower is better)
Translates to: GRKNARKVGLCVLGCVGPLCSCV*HGVTKS
Trigger: GGACTTGGTCACTCCATGTCAGACACACGAGCAGAG...GGGCCCCACGCACCCCAGAACACACAGACCCACCTTTCTGGCGTTCTTTCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR TCA 90 bp GGACAGCTGATAGCAGGGTACATCGCTGTCATCTGTGGACACGCAGGACCCCTGAAGCCTCTGTGGGGGTaGTGCTCTAGGCTGTACCCA +
Preference number: 4 (lower is better)
Translates to: GQLIAGYIAVICGHAGPLKPLWG*CSRLYP
Trigger: TGGGTACAGCCTAGAGCATCACCCCCACAGAGGCTT...CAGGGGTCCTGCGTGTCCACAGATGACAGCGATGTACCCTGCTATCAGCTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR GCA 90 bp GTGGTGGGAATGAGGCTGCGCCTACTAACAATAACCCCACCCACCCTGACGGCCGACTGTCCTGGCGCCTaGTTGTCAGGGTCATGCATA +
Preference number: 4 (lower is better)
Translates to: VVGMRLRLLTITPPTLTADCPGA*LSGSCI
Trigger: TATGCATGACCCTGACAAGCAGGCGCCAGGACAGTC...GGCCGTCAGGGTGGGTGGGGTTATTGTTAGTAGGCGCAGCCTCATTCCCACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370349.7
CDS-3UTR CCA 90 bp AAGGAGCTTCAGGCTCCACAGTGGTTTGTGTTCCTCTCTGCTCGTGTGTCTGACCAGGCTGCAGAGAGCTaGGAGACGACGGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: KELQAPQWFVFLSARVSDQAAES*ETTAAQ
Trigger: CTGGGCAGCCGTCGTCTCCCAGCTCTCTGCAGCCTG...GTCAGACACACGAGCAGAGAGGAACACAAACCACTGTGGAGCCTGAAGCTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp TTGTCTGACTGGGAGCTGCTGGCTAGGGGTGGGTGGAGGCCAGGGATACCTTTAAAGTCCAGGAGCCCGTaGTCTCCATCAAGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: LSDWELLARGGWRPGIPLKSRSP*SPSSSR
Trigger: GCGGCTACTTGATGGAGACCACGGGCTCCTGGACTT...TAAAGGTATCCCTGGCCTCCACCCACCCCTAGCCAGCAGCTCCCAGTCAGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp AAGGAGCTTCAGGCTCCACAGTGGTTTGTGTTCCTCTCTGCTCGTGTGTCTGACAGAGAGCAGCGAGCCTaGTCTGGACCCAGGCCCACC +
Preference number: 4 (lower is better)
Translates to: KELQAPQWFVFLSARVSDREQRA*SGPRPT
Trigger: GGTGGGCCTGGGTCCAGACCAGGCTCGCTGCTCTCT...GTCAGACACACGAGCAGAGAGGAACACAAACCACTGTGGAGCCTGAAGCTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp GGCAAAGGAACCCCGAAACCCAGCCTGGCTCTGCTGGCATGCTCATTTCAACACGGCTGTCTGACTCCATaGGGGCCCCACATCTTGGGA +
Preference number: 4 (lower is better)
Translates to: GKGTPKPSLALLACSFQHGCLTP*GPHILG
Trigger: TCCCAAGATGTGGGGCCCCCATGGAGTCAGACAGCC...GTGTTGAAATGAGCATGCCAGCAGAGCCAGGCTGGGTTTCGGGGTTCCTTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR CCA 90 bp GGCACTGGTCCCAGAGCAGCCACACTTACGGTCGAGACACAAAGTGGAATGGGGGGTCGAGACACAAAGTaGAATGGGGTTGCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: GTGPRAATLTVETQSGMGGRDTK*NGVAGA
Trigger: AGCCCCGGCAACCCCATTCCACTTTGTGTCTCGACC...CCCCATTCCACTTTGTGTCTCGACCGTAAGTGTGGCTGCTCTGGGACCAGTGCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR TCA 90 bp GATACCTTTAAGCATCCTACAGTGTGCAGGACAGCTCCCACCAAGGAGGACAGCCCCAGAAGAAGCTGCTaGGCACGATGCCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: DTFKHPTVCRTAPTKEDSPRRSC*ARCRPP
Trigger: AGGAGGCCGGCATCGTGCTCAGCAGCTTCTTCTGGG...GCTGTCCTCCTTGGTGGGAGCTGTCCTGCACACTGTAGGATGCTTAAAGGTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR TCA 90 bp ACAGCAATTCATTCACAACGCACAGGCCCCACCTCTGAACTCAGCCGCAGGTGGAGGCTGACAGCAGGATaGCCTTCTCACCCCCAATCC +
Preference number: 4 (lower is better)
Translates to: TAIHSQRTGPTSELSRRWRLTAG*PSHPQS
Trigger: GGATTGGGGGTGAGAAGGTCATCCTGCTGTCAGCCT...CCACCTGCGGCTGAGTTCAGAGGTGGGGCCTGTGCGTTGTGAATGAATTGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR TCA 90 bp ACAGATCGTGGTGGGAATGAGGCTGCGCCTACTAACAATAACCCCACCCACCCTGCCAGGAGAGGAGGATaGAGAAGGAGCAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: TDRGGNEAAPTNNNPTHPARRGG*RRSRLQ
Trigger: CTGCAGCCTGCTCCTTCTTCATCCTCCTCTCCTGGC...AGGGTGGGTGGGGTTATTGTTAGTAGGCGCAGCCTCATTCCCACCACGATCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR TCA 90 bp AGGCCAGGGATACCTTTAAGCATCCTACAGTGTGCAGGACAGCTCCCACCAAGGCTCAGGTCCACCCTCTaGGCCTGTCCAAACACCAGG +
Preference number: 4 (lower is better)
Translates to: RPGIPLSILQCAGQLPPRLRSTL*ACPNTR
Trigger: CCTGGTGTTTGGACAGGCTCAGAGGGTGGACCTGAG...CCTTGGTGGGAGCTGTCCTGCACACTGTAGGATGCTTAAAGGTATCCCTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR TCA 90 bp GAACCACGCGGAACAGATCGTGGTGGGAATGAGGCTGCGCCTACTAACAATAACCCAAGTCCCACACACTaGGTCCCCTGTGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: EPRGTDRGGNEAAPTNNNPSPTH*VPCVLG
Trigger: CCCCAGGACACAGGGGACTCAGTGTGTGGGACTTGG...GTTATTGTTAGTAGGCGCAGCCTCATTCCCACCACGATCTGTTCCGCGTGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR GCA 90 bp CTCTTCTTAAGGAGCTTCAGGCTCCACAGTGGTTTGTGTTCCTCTCTGCTCGTGGCGCTGCAGGAGGCTTaGGGAGAACACGGCGACCGA +
Preference number: 4 (lower is better)
Translates to: LFLRSFRLHSGLCSSLLVALQEA*GEHGDR
Trigger: TCGGTCGCCGTGTTCTCCGCAAGCCTCCTGCAGCGC...CACGAGCAGAGAGGAACACAAACCACTGTGGAGCCTGAAGCTCCTTAAGAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR GCA 90 bp CTCTTCTTAAGGAGCTTCAGGCTCCACAGTGGTTTGTGTTCCTCTCTGCTCGTGGGCCTGGGAAAGCCATaGGGGTTCGAGAGCCTGCGC +
Preference number: 4 (lower is better)
Translates to: LFLRSFRLHSGLCSSLLVGLGKP*GFESLR
Trigger: GCGCAGGCTCTCGAACCCGCATGGCTTTCCCAGGCC...CACGAGCAGAGAGGAACACAAACCACTGTGGAGCCTGAAGCTCCTTAAGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp GAACCACGCGGAACAGATCGTGGTGGGAATGAGGCTGCGCCTACTAACAATAACTTCCACCTGGACCACTaGGTGTCCCCGGCCATGTCC +
Preference number: 4 (lower is better)
Translates to: EPRGTDRGGNEAAPTNNNFHLDH*VSPAMS
Trigger: GGACATGGCCGGGGACACCCAGTGGTCCAGGTGGAA...GTTATTGTTAGTAGGCGCAGCCTCATTCCCACCACGATCTGTTCCGCGTGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370349.7
CDS-3UTR CCA 90 bp GGACTCTTCTTAAGGAGCTTCAGGCTCCACAGTGGTTTGTGTTCCTCTCTGCTCTGGAGACGGTGCAGATaGGCATGCTGGAGCGGGCGC +
Preference number: 4 (lower is better)
Translates to: GLFLRSFRLHSGLCSSLLWRRCR*ACWSGR
Trigger: GCGCCCGCTCCAGCATGCCCATCTGCACCGTCTCCA...GAGCAGAGAGGAACACAAACCACTGTGGAGCCTGAAGCTCCTTAAGAAGAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp GGCAAAGGAACCCCGAAACCCAGCCTGGCTCTGCTGGCATGCTCATTTCAACACCAGAAGCTGGAGGTGTaGCCCAGGCACAGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: GKGTPKPSLALLACSFQHQKLEV*PRHRAK
Trigger: CTTTGCTCTGTGCCTGGGCCACACCTCCAGCTTCTG...GTGTTGAAATGAGCATGCCAGCAGAGCCAGGCTGGGTTTCGGGGTTCCTTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR CCA 90 bp ACAGCAATTCATTCACAACGCACAGGCCCCACCTCTGAACTCAGCCGCAGGTGGCTGGCTAGGGGTGGGTaGAGGCCAGGGATACCTTTA +
Preference number: 4 (lower is better)
Translates to: TAIHSQRTGPTSELSRRWLARGG*RPGIPL
Trigger: TAAAGGTATCCCTGGCCTCCACCCACCCCTAGCCAG...CCACCTGCGGCTGAGTTCAGAGGTGGGGCCTGTGCGTTGTGAATGAATTGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR CCA 90 bp CTCTTCTTAAGGAGCTTCAGGCTCCACAGTGGTTTGTGTTCCTCTCTGCTCGTGGTCGTGTCTCGAGGGTaGCTACCTGGGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LFLRSFRLHSGLCSSLLVVVSRG*LPGEAG
Trigger: CCCAGCCTCCCCAGGTAGCCACCCTCGAGACACGAC...CACGAGCAGAGAGGAACACAAACCACTGTGGAGCCTGAAGCTCCTTAAGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp GGTAGAAAGAACGCCAGAAAGGTGGGTCTGTGTGTTCTGGGGTGCGTGGGGCCCAGAACGCCAGAAAGGTaGGTCTGTGTGTTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GRKNARKVGLCVLGCVGPRTPER*VCVFWG
Trigger: ACCCCAGAACACACAGACCCACCTTTCTGGCGTTCT...GGGCCCCACGCACCCCAGAACACACAGACCCACCTTTCTGGCGTTCTTTCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR GCA 90 bp AGGAGACACAGAGACTCTGAGGTCGTGTCTCGAGGGTGGCTACCTGGGGAGGCTTGCTTGTCAGGGTCATaGATACACAGGGTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: RRHRDSEVVSRGWLPGEACLSGS*IHRVVP
Trigger: TGGAACCACCCTGTGTATGCATGACCCTGACAAGCA...AGCCTCCCCAGGTAGCCACCCTCGAGACACGACCTCAGAGTCTCTGTGTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370349.7
CDS-3UTR GCA 90 bp GGACAGCTGATAGCAGGGTACATCGCTGTCATCTGTGGACACGCAGGACCCCTGAAGCATCCTACAGTGTaGAGGACAGCTCCCACCAAG +
Preference number: 4 (lower is better)
Translates to: GQLIAGYIAVICGHAGPLKHPTV*RTAPTK
Trigger: CTTGGTGGGAGCTGTCCTGCACACTGTAGGATGCTT...CAGGGGTCCTGCGTGTCCACAGATGACAGCGATGTACCCTGCTATCAGCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR CCA 90 bp AGGCTTCTAGGAGACACAGAGACTCTGAGGTCGTGTCTCGAGGGTGGCTACCTGAGGTCTGGAGGCCGATaGAGGCTGATGCAAAGACCA +
Preference number: 4 (lower is better)
Translates to: RLLGDTETLRSCLEGGYLRSGGR*RLMQRP
Trigger: TGGTCTTTGCATCAGCCTCCATCGGCCTCCAGACCT...CAGGTAGCCACCCTCGAGACACGACCTCAGAGTCTCTGTGTCTCCTAGAAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp AGGAGACACAGAGACTCTGAGGTCGTGTCTCGAGGGTGGCTACCTGGGGAGGCTCTTCAGGCTCCACAGTaGTTTGTGTTCCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: RRHRDSEVVSRGWLPGEALQAPQ*FVFLSA
Trigger: AGCAGAGAGGAACACAAACCACTGTGGAGCCTGAAG...AGCCTCCCCAGGTAGCCACCCTCGAGACACGACCTCAGAGTCTCTGTGTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp TCCCGAAGCCTCTGTGGGGGTGATGCTCTAGGCTGTACCCATGGTGCCACAGGGTCCCACCAGCTGTTGTaGACTCTTCTTAAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: SRSLCGGDALGCTHGATGSHQLL*TLLKEL
Trigger: AAGCTCCTTAAGAAGAGTCCACAACAGCTGGTGGGA...CCCTGTGGCACCATGGGTACAGCCTAGAGCATCACCCCCACAGAGGCTTCGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR CCA 90 bp CTCTTCTTAAGGAGCTTCAGGCTCCACAGTGGTTTGTGTTCCTCTCTGCTCGTGTCGAGGGTGGCTACCTaGGGAGGCTGGGCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: LFLRSFRLHSGLCSSLLVSRVAT*GGWAES
Trigger: AGACTCTGCCCAGCCTCCCCAGGTAGCCACCCTCGA...CACGAGCAGAGAGGAACACAAACCACTGTGGAGCCTGAAGCTCCTTAAGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp GAACCACGCGGAACAGATCGTGGTGGGAATGAGGCTGCGCCTACTAACAATAACCAACTGCCAGGCTTCTaGAAGCCCCTCCTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: EPRGTDRGGNEAAPTNNNQLPGF*KPLLPQ
Trigger: TTGGGGCAGGAGGGGCTTCCAGAAGCCTGGCAGTTG...GTTATTGTTAGTAGGCGCAGCCTCATTCCCACCACGATCTGTTCCGCGTGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR TCA 90 bp AAGGAGCTTCAGGCTCCACAGTGGTTTGTGTTCCTCTCTGCTCGTGTGTCTGACGCCCATGAGGATGCGTaGGAAGGTCATGAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: KELQAPQWFVFLSARVSDAHEDA*EGHEGQ
Trigger: CTGGCCTTCATGACCTTCTCACGCATCCTCATGGGC...GTCAGACACACGAGCAGAGAGGAACACAAACCACTGTGGAGCCTGAAGCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR TCA 90 bp TTAAGCATCCTACAGTGTGCAGGACAGCTCCCACCAAGGAGGACAGCCCGCCAGCACCCAAGGCCAGGATaGGATCTTTTTCACTCAGCA +
Preference number: 4 (lower is better)
Translates to: LSILQCAGQLPPRRTARQHPRPG*DLFHSA
Trigger: TGCTGAGTGAAAAAGATCTCATCCTGGCCTTGGGTG...CTGGCGGGCTGTCCTCCTTGGTGGGAGCTGTCCTGCACACTGTAGGATGCTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR TCA 90 bp ACAGATCGTGGTGGGAATGAGGCTGCGCCTACTAACAATAACCCCACCCACCCTCAGAGAGAAACCCGCTaGATAGACTGGCCGGAATCG +
Preference number: 4 (lower is better)
Translates to: TDRGGNEAAPTNNNPTHPQRETR*IDWPES
Trigger: CGATTCCGGCCAGTCTATTCAGCGGGTTTCTCTCTG...AGGGTGGGTGGGGTTATTGTTAGTAGGCGCAGCCTCATTCCCACCACGATCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR TCA 90 bp GAACCACGCGGAACAGATCGTGGTGGGAATGAGGCTGCGCCTACTAACAATAACGAGGCCGATGGAGGCTaGTGCAAAGACCACAGACTC +
Preference number: 4 (lower is better)
Translates to: EPRGTDRGGNEAAPTNNNEADGG*CKDHRL
Trigger: GAGTCTGTGGTCTTTGCATCAGCCTCCATCGGCCTC...GTTATTGTTAGTAGGCGCAGCCTCATTCCCACCACGATCTGTTCCGCGTGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR TCA 90 bp TACACCTTGCAAGATGTATCATTAACTCATGAAACCACCAGCTCCTCAGGCAACGGCCACACCAGCCTGTaGGGAGGACAGGGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: YTLQDVSLTHETTSSSGNGHTSL*GGQGRA
Trigger: GGCTCGGCCCTGTCCTCCTCACAGGCTGGTGTGGCC...GTTGCCTGAGGAGCTGGTGGTTTCATGAGTTAATGATACATCTTGCAAGGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR TCA 90 bp GATACCTTTAAGCATCCTACAGTGTGCAGGACAGCTCCCACCAAGGAGGACAGCGAGACACAGAGACTCTaGGGTCGTGTCTCGAGGGTG +
Preference number: 4 (lower is better)
Translates to: DTFKHPTVCRTAPTKEDSETQRL*GRVSRV
Trigger: CACCCTCGAGACACGACCTCAGAGTCTCTGTGTCTC...GCTGTCCTCCTTGGTGGGAGCTGTCCTGCACACTGTAGGATGCTTAAAGGTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR GCA 90 bp ACATCGCTGTCATCTGTGGACACGCAGGACCCCTGGCGGCAAAGGAACCCCGAACGGAGAAATAGAAGATaGTCTGCCAGCCGTACCATT +
Preference number: 4 (lower is better)
Translates to: TSLSSVDTQDPWRQRNPERRNRR*SASRTI
Trigger: AATGGTACGGCTGGCAGAGCATCTTCTATTTCTCCG...TTCGGGGTTCCTTTGCCGCCAGGGGTCCTGCGTGTCCACAGATGACAGCGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR GCA 90 bp GGCAAAGGAACCCCGAAACCCAGCCTGGCTCTGCTGGCATGCTCATTTCAACACAACCCAGCCTGGCTCTaGTGGCATGCTCATTTCAAC +
Preference number: 4 (lower is better)
Translates to: GKGTPKPSLALLACSFQHNPAWL*WHAHFN
Trigger: GTTGAAATGAGCATGCCAGCAGAGCCAGGCTGGGTT...GTGTTGAAATGAGCATGCCAGCAGAGCCAGGCTGGGTTTCGGGGTTCCTTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR CCA 90 bp TACACCTTGCAAGATGTATCATTAACTCATGAAACCACCAGCTCCTCAGGCAACCCTGCGGGCCTCGTCTaGGGGTGGCTGCATCGGGCT +
Preference number: 4 (lower is better)
Translates to: YTLQDVSLTHETTSSSGNPAGLV*GWLHRA
Trigger: AGCCCGATGCAGCCACCCCCAGACGAGGCCCGCAGG...GTTGCCTGAGGAGCTGGTGGTTTCATGAGTTAATGATACATCTTGCAAGGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp AAGGAGCTTCAGGCTCCACAGTGGTTTGTGTTCCTCTCTGCTCGTGTGTCTGACCAGACTCACAGAAGCTaGAGGTGTGGCCCAGGCACA +
Preference number: 4 (lower is better)
Translates to: KELQAPQWFVFLSARVSDQTHRS*RCGPGT
Trigger: TGTGCCTGGGCCACACCTCCAGCTTCTGTGAGTCTG...GTCAGACACACGAGCAGAGAGGAACACAAACCACTGTGGAGCCTGAAGCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp AGGCCAGGGATACCTTTAAGCATCCTACAGTGTGCAGGACAGCTCCCACCAAGGAGGTCTGGAGGCCGATaGAGGCTGATGCAAAGACCA +
Preference number: 4 (lower is better)
Translates to: RPGIPLSILQCAGQLPPRRSGGR*RLMQRP
Trigger: TGGTCTTTGCATCAGCCTCCATCGGCCTCCAGACCT...CCTTGGTGGGAGCTGTCCTGCACACTGTAGGATGCTTAAAGGTATCCCTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp AAGGAGCTTCAGGCTCCACAGTGGTTTGTGTTCCTCTCTGCTCGTGTGTCTGACAAGTCCAGGAGCCCGTaGTCTCCATCAAGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: KELQAPQWFVFLSARVSDKSRSP*SPSSSR
Trigger: GCGGCTACTTGATGGAGACCACGGGCTCCTGGACTT...GTCAGACACACGAGCAGAGAGGAACACAAACCACTGTGGAGCCTGAAGCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp TACACCTTGCAAGATGTATCATTAACTCATGAAACCACCAGCTCCTCAGGCAACGCAGCGAGCCTGGTCTaGACCCAGGCCCACCCCACC +
Preference number: 4 (lower is better)
Translates to: YTLQDVSLTHETTSSSGNAASLV*TQAHPT
Trigger: GGTGGGGTGGGCCTGGGTCCAGACCAGGCTCGCTGC...GTTGCCTGAGGAGCTGGTGGTTTCATGAGTTAATGATACATCTTGCAAGGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp GAACCACGCGGAACAGATCGTGGTGGGAATGAGGCTGCGCCTACTAACAATAACTCTAGGCTGTACCCATaGTGCCACAGGGTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: EPRGTDRGGNEAAPTNNNSRLYP*CHRVGL
Trigger: CAGCCCAACCCTGTGGCACCATGGGTACAGCCTAGA...GTTATTGTTAGTAGGCGCAGCCTCATTCCCACCACGATCTGTTCCGCGTGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR CCA 90 bp CTCTTCTTAAGGAGCTTCAGGCTCCACAGTGGTTTGTGTTCCTCTCTGCTCGTGAGACACAAAGTGGAATaGGGTTGCCGGGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LFLRSFRLHSGLCSSLLVRHKVE*GCRGWG
Trigger: CCCCCAGCCCCGGCAACCCCATTCCACTTTGTGTCT...CACGAGCAGAGAGGAACACAAACCACTGTGGAGCCTGAAGCTCCTTAAGAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR TCA 90 bp AGGCTTCTAGGAGACACAGAGACTCTGAGGTCGTGTCTCGAGGGTGGCTACCTGCACCCAAGGCCAGGATaGGATCTTTTTCACTCAGCA +
Preference number: 4 (lower is better)
Translates to: RLLGDTETLRSCLEGGYLHPRPG*DLFHSA
Trigger: TGCTGAGTGAAAAAGATCTCATCCTGGCCTTGGGTG...CAGGTAGCCACCCTCGAGACACGACCTCAGAGTCTCTGTGTCTCCTAGAAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR TCA 90 bp CTCTTCTTAAGGAGCTTCAGGCTCCACAGTGGTTTGTGTTCCTCTCTGCTCGTGGAGACACAGAGACTCTaGGGTCGTGTCTCGAGGGTG +
Preference number: 4 (lower is better)
Translates to: LFLRSFRLHSGLCSSLLVETQRL*GRVSRV
Trigger: CACCCTCGAGACACGACCTCAGAGTCTCTGTGTCTC...CACGAGCAGAGAGGAACACAAACCACTGTGGAGCCTGAAGCTCCTTAAGAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR TCA 90 bp AGGAGACACAGAGACTCTGAGGTCGTGTCTCGAGGGTGGCTACCTGGGGAGGCTTGTATCATTAACTCATaGAACCACCAGCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: RRHRDSEVVSRGWLPGEACIINS*NHQLLR
Trigger: CCTGAGGAGCTGGTGGTTTCATGAGTTAATGATACA...AGCCTCCCCAGGTAGCCACCCTCGAGACACGACCTCAGAGTCTCTGTGTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR TCA 90 bp GAACCACGCGGAACAGATCGTGGTGGGAATGAGGCTGCGCCTACTAACAATAACAAGATGAGAAAGTTCTaGAGGCGGAGGGTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: EPRGTDRGGNEAAPTNNNKMRKF*RRRVAV
Trigger: CACCGCCACCCTCCGCCTTCAGAACTTTCTCATCTT...GTTATTGTTAGTAGGCGCAGCCTCATTCCCACCACGATCTGTTCCGCGTGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR GCA 90 bp GGACTCTTCTTAAGGAGCTTCAGGCTCCACAGTGGTTTGTGTTCCTCTCTGCTCGGGTGCCCAGGCGTCTaGCCACTGAGAACACTGTTA +
Preference number: 4 (lower is better)
Translates to: GLFLRSFRLHSGLCSSLLGCPGV*PLRTLL
Trigger: TAACAGTGTTCTCAGTGGGCAGACGCCTGGGCACCC...GAGCAGAGAGGAACACAAACCACTGTGGAGCCTGAAGCTCCTTAAGAAGAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR GCA 90 bp GAAAGCCATGCGGGTTCGAGAGCCTGCGCCATGGCCATGCTGGGCAGGGCCCAAAATAAGGCTTTGGCGTaGTTTTCCACATTTTTAGGT +
Preference number: 4 (lower is better)
Translates to: ESHAGSRACAMAMLGRAQNKALA*FSTFLG
Trigger: ACCTAAAAATGTGGAAAAGCACGCCAAAGCCTTATT...TTGGGCCCTGCCCAGCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp GGACTCTTCTTAAGGAGCTTCAGGCTCCACAGTGGTTTGTGTTCCTCTCTGCTCTTCCAGCCGAAGTCCTaGCTCATGGAGACGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GLFLRSFRLHSGLCSSLLFQPKS*LMETVQ
Trigger: CTGCACCGTCTCCATGAGCCAGGACTTCGGCTGGAA...GAGCAGAGAGGAACACAAACCACTGTGGAGCCTGAAGCTCCTTAAGAAGAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp CTTGTGACAAAACTGATAAAACCGAAGGACACTCTGCTGAGTGAAGTAAGCCAGGTCCCCGTCCATGCCTaGCACTCGGGCCTGGACCAC +
Preference number: 4 (lower is better)
Translates to: LVTKLIKPKDTLLSEVSQVPVHA*HSGLDH
Trigger: GTGGTCCAGGCCCGAGTGCCAGGCATGGACGGGGAC...CTGGCTTACTTCACTCAGCAGAGTGTCCTTCGGTTTTATCAGTTTTGTCACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR TCA 90 bp AAACCACCAGCTCCTCAGGCAACGAAAAGGGAGGTAGAAAGAACGCCAGAAAGGCTTGGAGCAAGCCCATaGGGATGCGTGAGAAGGTCA +
Preference number: 4 (lower is better)
Translates to: KPPAPQATKREVERTPERLGASP*GCVRRS
Trigger: TGACCTTCTCACGCATCCTCATGGGCTTGCTCCAAG...CCTTTCTGGCGTTCTTTCTACCTCCCTTTTCGTTGCCTGAGGAGCTGGTGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR TCA 90 bp GGACTCTTCTTAAGGAGCTTCAGGCTCCACAGTGGTTTGTGTTCCTCTCTGCTCACACCCAAAGCAAGGTaGGGCCGCCGGAGAAATAGA +
Preference number: 4 (lower is better)
Translates to: GLFLRSFRLHSGLCSSLLTPKAR*GRRRNR
Trigger: TCTATTTCTCCGGCGGCCTCACCTTGCTTTGGGTGT...GAGCAGAGAGGAACACAAACCACTGTGGAGCCTGAAGCTCCTTAAGAAGAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR TCA 90 bp CTCTTCTTAAGGAGCTTCAGGCTCCACAGTGGTTTGTGTTCCTCTCTGCTCGTGCTCTGCTCGTGTGTCTaGCATGGAGTGACCAAGTCC +
Preference number: 4 (lower is better)
Translates to: LFLRSFRLHSGLCSSLLVLCSCV*HGVTKS
Trigger: GGACTTGGTCACTCCATGTCAGACACACGAGCAGAG...CACGAGCAGAGAGGAACACAAACCACTGTGGAGCCTGAAGCTCCTTAAGAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR GCA 90 bp ACCTTGCAAGATGTATCATTAACTCATGAAACCACCAGCTCCTCAGGCAACGAAGCATCGGGCTTGGGGTaGTCAGACGGCGTGGGCACA +
Preference number: 4 (lower is better)
Translates to: TLQDVSLTHETTSSSGNEASGLG*SDGVGT
Trigger: TGTGCCCACGCCGTCTGAGCACCCCAAGCCCGATGC...TTCGTTGCCTGAGGAGCTGGTGGTTTCATGAGTTAATGATACATCTTGCAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR GCA 90 bp TACACCTTGCAAGATGTATCATTAACTCATGAAACCACCAGCTCCTCAGGCAACTCGTCTGGGGGTGGCTaGATCGGGCTTGGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: YTLQDVSLTHETTSSSGNSSGGG*IGLGVL
Trigger: GAGCACCCCAAGCCCGATGCAGCCACCCCCAGACGA...GTTGCCTGAGGAGCTGGTGGTTTCATGAGTTAATGATACATCTTGCAAGGTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp ACCTTGCAAGATGTATCATTAACTCATGAAACCACCAGCTCCTCAGGCAACGAACAGGTGGGCGAGCAGTaGGGTGACGGCCGTGATGGA +
Preference number: 4 (lower is better)
Translates to: TLQDVSLTHETTSSSGNEQVGEQ*GDGRDG
Trigger: TCCATCACGGCCGTCACCCCACTGCTCGCCCACCTG...TTCGTTGCCTGAGGAGCTGGTGGTTTCATGAGTTAATGATACATCTTGCAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp GAACCACGCGGAACAGATCGTGGTGGGAATGAGGCTGCGCCTACTAACAATAACACAGAAATGCCACTGTaGTTGAAGGTCTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: EPRGTDRGGNEAAPTNNNTEMPL*LKVWRP
Trigger: CGGCCTCCAGACCTTCAACCACAGTGGCATTTCTGT...GTTATTGTTAGTAGGCGCAGCCTCATTCCCACCACGATCTGTTCCGCGTGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp AAGGAGCTTCAGGCTCCACAGTGGTTTGTGTTCCTCTCTGCTCGTGTGTCTGACCTCGTGTGTCTGACATaGAGTGACCAAGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: KELQAPQWFVFLSARVSDLVCLT*SDQVPH
Trigger: GTGTGGGACTTGGTCACTCCATGTCAGACACACGAG...GTCAGACACACGAGCAGAGAGGAACACAAACCACTGTGGAGCCTGAAGCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR GCA 90 bp ACCTTGCAAGATGTATCATTAACTCATGAAACCACCAGCTCCTCAGGCAACGAACACACCCACGACACCTaGCAAGGCCCCGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: TLQDVSLTHETTSSSGNEHTHDT*QGPGCV
Trigger: AACACAGCCGGGGCCTTGGCAGGTGTCGTGGGTGTG...TTCGTTGCCTGAGGAGCTGGTGGTTTCATGAGTTAATGATACATCTTGCAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR GCA 90 bp CTCTTCTTAAGGAGCTTCAGGCTCCACAGTGGTTTGTGTTCCTCTCTGCTCGTGAAGCATCCTACAGTGTaGAGGACAGCTCCCACCAAG +
Preference number: 4 (lower is better)
Translates to: LFLRSFRLHSGLCSSLLVKHPTV*RTAPTK
Trigger: CTTGGTGGGAGCTGTCCTGCACACTGTAGGATGCTT...CACGAGCAGAGAGGAACACAAACCACTGTGGAGCCTGAAGCTCCTTAAGAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp CTTGTGACAAAACTGATAAAACCGAAGGACACTCTGCTGAGTGAAGTAAGCCAGTCGAGGGTGGCTACCTaGGGAGGCTGGGCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: LVTKLIKPKDTLLSEVSQSRVAT*GGWAES
Trigger: AGACTCTGCCCAGCCTCCCCAGGTAGCCACCCTCGA...CTGGCTTACTTCACTCAGCAGAGTGTCCTTCGGTTTTATCAGTTTTGTCACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR CCA 90 bp ACCTTGCAAGATGTATCATTAACTCATGAAACCACCAGCTCCTCAGGCAACGAAACCCACCCACTGCCCTaGGGGTCTCTGTCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: TLQDVSLTHETTSSSGNETHPLP*GSLSGF
Trigger: GAAGCCTGACAGAGACCCCCAGGGCAGTGGGTGGGT...TTCGTTGCCTGAGGAGCTGGTGGTTTCATGAGTTAATGATACATCTTGCAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR TCA 90 bp CTTGTGACAAAACTGATAAAACCGAAGGACACTCTGCTGAGTGAAGTAAGCCAGCCACGATGCTGTAGGTaGAGGCTCGCTCACTCTCCC +
Preference number: 4 (lower is better)
Translates to: LVTKLIKPKDTLLSEVSQPRCCR*RLAHSP
Trigger: GGGAGAGTGAGCGAGCCTTCACCTACAGCATCGTGG...CTGGCTTACTTCACTCAGCAGAGTGTCCTTCGGTTTTATCAGTTTTGTCACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR TCA 90 bp CTTGTGACAAAACTGATAAAACCGAAGGACACTCTGCTGAGTGAAGTAAGCCAGCTCAGGTCCACCCTCTaGGCCTGTCCAAACACCAGG +
Preference number: 4 (lower is better)
Translates to: LVTKLIKPKDTLLSEVSQLRSTL*ACPNTR
Trigger: CCTGGTGTTTGGACAGGCTCAGAGGGTGGACCTGAG...CTGGCTTACTTCACTCAGCAGAGTGTCCTTCGGTTTTATCAGTTTTGTCACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR TCA 90 bp ACAGATCGTGGTGGGAATGAGGCTGCGCCTACTAACAATAACCCCACCCACCCTTGTATCATTAACTCATaGAACCACCAGCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: TDRGGNEAAPTNNNPTHPCIINS*NHQLLR
Trigger: CCTGAGGAGCTGGTGGTTTCATGAGTTAATGATACA...AGGGTGGGTGGGGTTATTGTTAGTAGGCGCAGCCTCATTCCCACCACGATCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR GCA 90 bp ACCTTGCAAGATGTATCATTAACTCATGAAACCACCAGCTCCTCAGGCAACGAAAGTACAGAAGGCATGTaGCCAGCAGCAGCGTCCCCG +
Preference number: 4 (lower is better)
Translates to: TLQDVSLTHETTSSSGNESTEGM*PAAASP
Trigger: CGGGGACGCTGCTGCTGGGCACATGCCTTCTGTACT...TTCGTTGCCTGAGGAGCTGGTGGTTTCATGAGTTAATGATACATCTTGCAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR GCA 90 bp GGTAGAAAGAACGCCAGAAAGGTGGGTCTGTGTGTTCTGGGGTGCGTGGGGCCCACATTTGTGCTCAAGTaGAAAACTCCACTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: GRKNARKVGLCVLGCVGPTFVLK*KTPLCL
Trigger: AAGACAAAGTGGAGTTTTGCACTTGAGCACAAATGT...GGGCCCCACGCACCCCAGAACACACAGACCCACCTTTCTGGCGTTCTTTCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR GCA 90 bp TACACCTTGCAAGATGTATCATTAACTCATGAAACCACCAGCTCCTCAGGCAACCCTCCAGACAGCAACTaGCAGGCTTCTGGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: YTLQDVSLTHETTSSSGNPPDSN*QASGSP
Trigger: GGGGCTTCCAGAAGCCTGGCAGTTGCTGTCTGGAGG...GTTGCCTGAGGAGCTGGTGGTTTCATGAGTTAATGATACATCTTGCAAGGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR CCA 90 bp AAACCACCAGCTCCTCAGGCAACGAAAAGGGAGGTAGAAAGAACGCCAGAAAGGGACGGGGCCAAGTCCTaGATGTTAACAGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: KPPAPQATKREVERTPERDGAKS*MLTEMP
Trigger: TGGCATTTCTGTTAACATCCAGGACTTGGCCCCGTC...CCTTTCTGGCGTTCTTTCTACCTCCCTTTTCGTTGCCTGAGGAGCTGGTGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp AAGGAGCTTCAGGCTCCACAGTGGTTTGTGTTCCTCTCTGCTCGTGTGTCTGACTCCCACCAGCTGTTGTaGACTCTTCTTAAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: KELQAPQWFVFLSARVSDSHQLL*TLLKEL
Trigger: AAGCTCCTTAAGAAGAGTCCACAACAGCTGGTGGGA...GTCAGACACACGAGCAGAGAGGAACACAAACCACTGTGGAGCCTGAAGCTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp CTCTTCTTAAGGAGCTTCAGGCTCCACAGTGGTTTGTGTTCCTCTCTGCTCGTGGTCTGGAGACATTTCTaGCTGTTGTCTGACTGGGAG +
Preference number: 4 (lower is better)
Translates to: LFLRSFRLHSGLCSSLLVVWRHF*LLSDWE
Trigger: CTCCCAGTCAGACAACAGCCAGAAATGTCTCCAGAC...CACGAGCAGAGAGGAACACAAACCACTGTGGAGCCTGAAGCTCCTTAAGAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR CAA 72 bp GGACTCTTCTTAAGGAGCTTCAGGCTCCACAGTGGTTaGTGTTCCTCTCTGCTCGTGTGTCTGACATGGAGT +
Preference number: 4 (lower is better)
Translates to: GLFLRSFRLHSG*CSSLLVCLTWS
Trigger: ACTCCATGTCAGACACACGAGCAGAGAGGAACACAAACCACTGTGGAGCCTGAAGCTCCTTAAGAAGAGTCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR TCA 90 bp TACACCTTGCAAGATGTATCATTAACTCATGAAACCACCAGCTCCTCAGGCAACGCCCATGAGGATGCGTaGGAAGGTCATGAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: YTLQDVSLTHETTSSSGNAHEDA*EGHEGQ
Trigger: CTGGCCTTCATGACCTTCTCACGCATCCTCATGGGC...GTTGCCTGAGGAGCTGGTGGTTTCATGAGTTAATGATACATCTTGCAAGGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR TCA 90 bp ACCTTGCAAGATGTATCATTAACTCATGAAACCACCAGCTCCTCAGGCAACGAAGCCACAGGGTTGGGCTaGCCGAAACTGGAGAGATTG +
Preference number: 4 (lower is better)
Translates to: TLQDVSLTHETTSSSGNEATGLG*PKLERL
Trigger: CAATCTCTCCAGTTTCGGTCAGCCCAACCCTGTGGC...TTCGTTGCCTGAGGAGCTGGTGGTTTCATGAGTTAATGATACATCTTGCAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR TCA 90 bp GATACCTTTAAGCATCCTACAGTGTGCAGGACAGCTCCCACCAAGGAGGACAGCAGATTTAGTGCAAGATaGGGAGGAGAGAGACAGCAA +
Preference number: 4 (lower is better)
Translates to: DTFKHPTVCRTAPTKEDSRFSAR*GGERQQ
Trigger: TTGCTGTCTCTCTCCTCCTCATCTTGCACTAAATCT...GCTGTCCTCCTTGGTGGGAGCTGTCCTGCACACTGTAGGATGCTTAAAGGTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR GCA 90 bp TACACCTTGCAAGATGTATCATTAACTCATGAAACCACCAGCTCCTCAGGCAACGGGTGCCCAGGCGTCTaGCCACTGAGAACACTGTTA +
Preference number: 4 (lower is better)
Translates to: YTLQDVSLTHETTSSSGNGCPGV*PLRTLL
Trigger: TAACAGTGTTCTCAGTGGGCAGACGCCTGGGCACCC...GTTGCCTGAGGAGCTGGTGGTTTCATGAGTTAATGATACATCTTGCAAGGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR GCA 90 bp GATACCTTTAAGCATCCTACAGTGTGCAGGACAGCTCCCACCAAGGAGGACAGCGTAGGGGAACATTTGTaGTCAAGTGCAAAACTCCAC +
Preference number: 4 (lower is better)
Translates to: DTFKHPTVCRTAPTKEDSVGEHL*SSAKLH
Trigger: GTGGAGTTTTGCACTTGAGCACAAATGTTCCCCTAC...GCTGTCCTCCTTGGTGGGAGCTGTCCTGCACACTGTAGGATGCTTAAAGGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR CCA 90 bp CTTGTGACAAAACTGATAAAACCGAAGGACACTCTGCTGAGTGAAGTAAGCCAGCGAAGTCCTGGCTCATaGAGACGGTGCAGATGGGCA +
Preference number: 4 (lower is better)
Translates to: LVTKLIKPKDTLLSEVSQRSPGS*RRCRWA
Trigger: TGCCCATCTGCACCGTCTCCATGAGCCAGGACTTCG...CTGGCTTACTTCACTCAGCAGAGTGTCCTTCGGTTTTATCAGTTTTGTCACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR CCA 90 bp ACCTTGCAAGATGTATCATTAACTCATGAAACCACCAGCTCCTCAGGCAACGAATTCCAGCCGAAGTCCTaGCTCATGGAGACGGTGCAG +
Preference number: 4 (lower is better)
Translates to: TLQDVSLTHETTSSSGNEFQPKS*LMETVQ
Trigger: CTGCACCGTCTCCATGAGCCAGGACTTCGGCTGGAA...TTCGTTGCCTGAGGAGCTGGTGGTTTCATGAGTTAATGATACATCTTGCAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp ACCTTGCAAGATGTATCATTAACTCATGAAACCACCAGCTCCTCAGGCAACGAAAGGCCCCGGCTGTGTTaGCCACACCAAACAGAAAGC +
Preference number: 4 (lower is better)
Translates to: TLQDVSLTHETTSSSGNERPRLC*PHQTES
Trigger: GCTTTCTGTTTGGTGTGGCCAACACAGCCGGGGCCT...TTCGTTGCCTGAGGAGCTGGTGGTTTCATGAGTTAATGATACATCTTGCAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp ACCTTGCAAGATGTATCATTAACTCATGAAACCACCAGCTCCTCAGGCAACGAAGCTACCTGGGGAGGCTaGGCAGAGTCTGGAGACATT +
Preference number: 4 (lower is better)
Translates to: TLQDVSLTHETTSSSGNEATWGG*AESGDI
Trigger: AATGTCTCCAGACTCTGCCCAGCCTCCCCAGGTAGC...TTCGTTGCCTGAGGAGCTGGTGGTTTCATGAGTTAATGATACATCTTGCAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp ACCTTGCAAGATGTATCATTAACTCATGAAACCACCAGCTCCTCAGGCAACGAACAGAATCACCAGGCCTaGGAAAGCCATGCGGGTTCG +
Preference number: 4 (lower is better)
Translates to: TLQDVSLTHETTSSSGNEQNHQA*ESHAGS
Trigger: CGAACCCGCATGGCTTTCCCAGGCCTGGTGATTCTG...TTCGTTGCCTGAGGAGCTGGTGGTTTCATGAGTTAATGATACATCTTGCAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR TCA 90 bp ACCTTGCAAGATGTATCATTAACTCATGAAACCACCAGCTCCTCAGGCAACGAAACACCCAAAGCAAGGTaGGGCCGCCGGAGAAATAGA +
Preference number: 4 (lower is better)
Translates to: TLQDVSLTHETTSSSGNETPKAR*GRRRNR
Trigger: TCTATTTCTCCGGCGGCCTCACCTTGCTTTGGGTGT...TTCGTTGCCTGAGGAGCTGGTGGTTTCATGAGTTAATGATACATCTTGCAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR GCA 90 bp CACTCGTTTCCTCATGAAATTAGTTACAGAAAGTCTTTAACACGTGTTCATTCTTCTGGAAGCCCCTCCTaGCCCAAGACCCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: HSFPHEISYRKSLTRVHSSGSPS*PKTPQQ
Trigger: CTGCTGTGGGGTCTTGGGGCAGGAGGGGCTTCCAGA...AGAATGAACACGTGTTAAAGACTTTCTGTAACTAATTTCATGAGGAAACGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR CCA 90 bp ACCTTGCAAGATGTATCATTAACTCATGAAACCACCAGCTCCTCAGGCAACGAAGACGGGGCCAAGTCCTaGATGTTAACAGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: TLQDVSLTHETTSSSGNEDGAKS*MLTEMP
Trigger: TGGCATTTCTGTTAACATCCAGGACTTGGCCCCGTC...TTCGTTGCCTGAGGAGCTGGTGGTTTCATGAGTTAATGATACATCTTGCAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
3UTR CAA 72 bp GGGCTGACCGAAACTGGAGAGATTGTAGGGGAACATTaGTGCTCAAGTGCAAAACTCCACTTTGTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: GLTETGEIVGEH*CSSAKLHFVFP
Trigger: TGGAAAGACAAAGTGGAGTTTTGCACTTGAGCACAAATGTTCCCCTACAATCTCTCCAGTTTCGGTCAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR GCA 90 bp GGACTCTTCTTAAGGAGCTTCAGGCTCCACAGTGGTTTGTGTTCCTCTCTGCTCAATAAGGCTTTGGCGTaGTTTTCCACATTTTTAGGT +
Preference number: 4 (lower is better)
Translates to: GLFLRSFRLHSGLCSSLLNKALA*FSTFLG
Trigger: ACCTAAAAATGTGGAAAAGCACGCCAAAGCCTTATT...GAGCAGAGAGGAACACAAACCACTGTGGAGCCTGAAGCTCCTTAAGAAGAGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CCA 90 bp ACCTTGCAAGATGTATCATTAACTCATGAAACCACCAGCTCCTCAGGCAACGAACACAGAGCTTCGGTTTaGGAAGATGAGAAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: TLQDVSLTHETTSSSGNEHRASV*EDEKVL
Trigger: CAGAACTTTCTCATCTTCCCAAACCGAAGCTCTGTG...TTCGTTGCCTGAGGAGCTGGTGGTTTCATGAGTTAATGATACATCTTGCAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR CCA 90 bp CACTCGTTTCCTCATGAAATTAGTTACAGAAAGTCTTTAACACGTGTTCATTCTATGGTGCCACAGGGTTaGGCTGACCGAAACTGGAGA +
Preference number: 4 (lower is better)
Translates to: HSFPHEISYRKSLTRVHSMVPQG*ADRNWR
Trigger: TCTCCAGTTTCGGTCAGCCCAACCCTGTGGCACCAT...AGAATGAACACGTGTTAAAGACTTTCTGTAACTAATTTCATGAGGAAACGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR CCA 90 bp CACTCGTTTCCTCATGAAATTAGTTACAGAAAGTCTTTAACACGTGTTCATTCTTGGGCTGACCGAAACTaGAGAGATTGTAGGGGAACA +
Preference number: 4 (lower is better)
Translates to: HSFPHEISYRKSLTRVHSWADRN*RDCRGT
Trigger: TGTTCCCCTACAATCTCTCCAGTTTCGGTCAGCCCA...AGAATGAACACGTGTTAAAGACTTTCTGTAACTAATTTCATGAGGAAACGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR TCA 90 bp CACTCGTTTCCTCATGAAATTAGTTACAGAAAGTCTTTAACACGTGTTCATTCTTTCGGTTTGGGAAGATaGGAAAGTTCTGAAGGCGGA +
Preference number: 4 (lower is better)
Translates to: HSFPHEISYRKSLTRVHSFGLGR*ESSEGG
Trigger: TCCGCCTTCAGAACTTTCTCATCTTCCCAAACCGAA...AGAATGAACACGTGTTAAAGACTTTCTGTAACTAATTTCATGAGGAAACGAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS GCA 90 bp GGCTTGGGGTGCTCAGACGGCGTGGGCACAGCTGTGTCCCGGGGCTaGCTCCCAGCCCAGGCTGACCCACCCGGGCAGCACCGCCCAAGT +
Preference number: 5 (lower is better)
Translates to: GLGCSDGVGTAVSRG*LPAQADPPGQHRPS
Trigger: ACTTGGGCGGTGCTGCCCGGGTGGGTCAGCCTGGGCTGGGAGGCAGCCCCGGGACACAGCTGTGCCCACGCCGTCTGAGCACCCCAAGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370349.7
ENST00000370351.9
ENST00000488738.5
CDS CCA 90 bp GGCCATGTCCCTGCGGGCCTCGTCTGGGGGTGGCTGCATCGGGCTTaGGGTGCTCAGACGGCGTGGGCACAGCTGTGTCCCGGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: GHVPAGLVWGWLHRA*GAQTAWAQLCPGAA
Trigger: GGCAGCCCCGGGACACAGCTGTGCCCACGCCGTCTGAGCACCCCAAGCCCGATGCAGCCACCCCCAGACGAGGCCCGCAGGGACATGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370349.7
ENST00000370351.9
ENST00000488738.5
CDS GCA 90 bp CGGTGCAGATGGGCATGCTGGAGCGGGCGCAGTACAGAAGGCATGTaGCCAGCAGCAGCGTCCCCGTCCATGCCTGGCACTCGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: RCRWACWSGRSTEGM*PAAASPSMPGTRAW
Trigger: CCAGGCCCGAGTGCCAGGCATGGACGGGGACGCTGCTGCTGGGCACATGCCTTCTGTACTGCGCCCGCTCCAGCATGCCCATCTGCACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370349.7
ENST00000370351.9
ENST00000411611.1
ENST00000488738.5
CDS CCA 90 bp GGCTCTGAAGTCGGGTTCTGTGGGCCAGCAGGTCACGATGAGGGCTaGGAGGGCTGCAGCCGCAGCAGGAAGGCACCGAGCGCCCGCATC +
Preference number: 5 (lower is better)
Translates to: GSEVGFCGPAGHDEG*EGCSRSRKAPSARI
Trigger: GATGCGGGCGCTCGGTGCCTTCCTGCTGCGGCTGCAGCCCTCCCAGCCCTCATCGTGACCTGCTGGCCCACAGAACCCGACTTCAGAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488738.5
CDS GCA 90 bp TCTGCAGGCCAAGGACCCACAGTGCCTGGTGCAGCTCAAGCCTCGTaGCTTCTGGGCGCTCCTTCACCCTGCGGGAGCCCCCGACTCACC +
Preference number: 5 (lower is better)
Translates to: SAGQGPTVPGAAQAS*LLGAPSPCGSPRLT
Trigger: GGTGAGTCGGGGGCTCCCGCAGGGTGAAGGAGCGCCCAGAAGGCACGAGGCTTGAGCTGCACCAGGCACTGTGGGTCCTTGGCCTGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000487303.1
ENST00000488738.5
CDS CCA 90 bp GCCAAGGACCCACAGTGCCTGGTGCAGCTCAAGCCTCGTGCCTTCTaGGCGCTCCTTCACCCTGCGGGAGCCCCCGACTCACCTTGGCGT +
Preference number: 5 (lower is better)
Translates to: AKDPQCLVQLKPRAF*ALLHPAGAPDSPWR
Trigger: ACGCCAAGGTGAGTCGGGGGCTCCCGCAGGGTGAAGGAGCGCCCAGAAGGCACGAGGCTTGAGCTGCACCAGGCACTGTGGGTCCTTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000487303.1
ENST00000488738.5
CDS-3UTR CAA 90 bp GAAAGCCATGCGGGTTCGAGAGCCTGCGCCATGGCCATGCTGGGCAGGGCCCAAGCGACCGAGGGAGGTTaGGCGGGAACCACGCGGAAC +
Preference number: 5 (lower is better)
Translates to: ESHAGSRACAMAMLGRAQATEGG*AGTTRN
Trigger: GTTCCGCGTGGTTCCCGCCAAACCTCCCTCGGTCGC...TTGGGCCCTGCCCAGCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CAA 90 bp GGACCGTCCCGAAGCCTCTGTGGGGGTGATGCTCTAGGCTGTACCCATGGTGCCGGCGCTGCAGGAGGCTaGCGGAGAACACGGCGACCG +
Preference number: 5 (lower is better)
Translates to: GPSRSLCGGDALGCTHGAGAAGG*RRTRRP
Trigger: CGGTCGCCGTGTTCTCCGCAAGCCTCCTGCAGCGCC...GGCACCATGGGTACAGCCTAGAGCATCACCCCCACAGAGGCTTCGGGACGGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS GCA 90 bp CAGACAGCAGGCTTCCGGAAGAGCCGTCTCCAGGGGACTCTGTTGTaGCTGGACACCGGCCGGCTTTGGGCCAGGACACCCAAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: QTAGFRKSRLQGTLL*LDTGRLWARTPKAR
Trigger: CCTGGCCTTGGGTGTCCTGGCCCAAAGCCGGCCGGTGTCCAGGCACAACAGAGTCCCCTGGAGACGGCTCTTCCGGAAGCCTGCTGTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370349.7
ENST00000370351.9
ENST00000459704.6
ENST00000487303.1
ENST00000488738.5
CDS GCA 90 bp GCCGAGGGTTCCACCATCTGCAGGCCAAGGACCCACAGTGCCTGGTaGAGCTCAAGCCTCGTGCCTTCTGGGCGCTCCTTCACCCTGCGG +
Preference number: 5 (lower is better)
Translates to: AEGSTICRPRTHSAW*SSSLVPSGRSFTLR
Trigger: CCGCAGGGTGAAGGAGCGCCCAGAAGGCACGAGGCTTGAGCTGCACCAGGCACTGTGGGTCCTTGGCCTGCAGATGGTGGAACCCTCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487303.1
ENST00000488738.5
CDS GCA 90 bp GCCCCGAGCATGGACGGGGTCCTCTCCAGAGGAAGAGCCTGGCAGTaGCAGGACCCTCAGAGTCCAGGAGGAGCCGAGGGTTCCACCATC +
Preference number: 5 (lower is better)
Translates to: APSMDGVLSRGRAWQ*QDPQSPGGAEGSTI
Trigger: GATGGTGGAACCCTCGGCTCCTCCTGGACTCTGAGGGTCCTGGCACTGCCAGGCTCTTCCTCTGGAGAGGACCCCGTCCATGCTCGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488738.5
CDS-3UTR CAA 90 bp ATCACCAGGCCTGGGAAAGCCATGCGGGTTCGAGAGCCTGCGCCATGGCCATGCGTGGCTGCATCGGGCTaGGGGTGCTCAGACGGCGTG +
Preference number: 5 (lower is better)
Translates to: ITRPGKAMRVREPAPWPCVAASG*GCSDGV
Trigger: CACGCCGTCTGAGCACCCCAAGCCCGATGCAGCCAC...GCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTCCCAGGCCTGGTGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS TCA 90 bp TCAGCAGCGTCCCAAACTGGGAGCCGGCGCCCACGATGCTGTAGGTaGAGGCTCGCTCACTCTCCCGCACCTTCTGCGACAGCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: SAASQTGSRRPRCCR*RLAHSPAPSATAGW
Trigger: CCAGCCTGCTGTCGCAGAAGGTGCGGGAGAGTGAGCGAGCCTTCACCTACAGCATCGTGGGCGCCGGCTCCCAGTTTGGGACGCTGCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370349.7
ENST00000370351.9
ENST00000488738.5
CDS CCA 90 bp AAACCTGCCCCGAGCATGGACGGGGTCCTCTCCAGAGGAAGAGCCTaGCAGTGCCAGGACCCTCAGAGTCCAGGAGGAGCCGAGGGTTCC +
Preference number: 5 (lower is better)
Translates to: KPAPSMDGVLSRGRA*QCQDPQSPGGAEGS
Trigger: GGAACCCTCGGCTCCTCCTGGACTCTGAGGGTCCTGGCACTGCCAGGCTCTTCCTCTGGAGAGGACCCCGTCCATGCTCGGGGCAGGTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488738.5
CDS GCA 90 bp TCCATGCCTGGCACTCGGGCCTGGCCTCCTGACTGTCCTGGCGCCTaGTTGTCAGGGTCATGCATACACAGGGTGGTTCCACCTGGCGAG +
Preference number: 5 (lower is better)
Translates to: SMPGTRAWPPDCPGA*LSGSCIHRVVPPGE
Trigger: CTCGCCAGGTGGAACCACCCTGTGTATGCATGACCCTGACAAGCAGGCGCCAGGACAGTCAGGAGGCCAGGCCCGAGTGCCAGGCATGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411611.1
CDS GCA 90 bp GAGGCACTGGGCAGCTGTGGGCGCCCGGGACTAGCCCGCCCGGCCTaGGTTACCTTTTTCACTCAGCAGGTACCTGTACACGTACCACAC +
Preference number: 5 (lower is better)
Translates to: EALGSCGRPGLARPA*VTFFTQQVPVHVPH
Trigger: GTGTGGTACGTGTACAGGTACCTGCTGAGTGAAAAAGGTAACGCAGGCCGGGCGGGCTAGTCCCGGGCGCCCACAGCTGCCCAGTGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488738.5
CDS GCA 90 bp AGGAGGAGCCGAGGGTTCCACCATCTGCAGGCCAAGGACCCACAGTaGCTGGTGCAGCTCAAGCCTCGTGCCTTCTGGGCGCTCCTTCAC +
Preference number: 5 (lower is better)
Translates to: RRSRGFHHLQAKDPQ*LVQLKPRAFWALLH
Trigger: GTGAAGGAGCGCCCAGAAGGCACGAGGCTTGAGCTGCACCAGGCACTGTGGGTCCTTGGCCTGCAGATGGTGGAACCCTCGGCTCCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487303.1
ENST00000488738.5
CDS GCA 90 bp TGCCAGGACCCTCAGAGTCCAGGAGGAGCCGAGGGTTCCACCATCTaGAGGCCAAGGACCCACAGTGCCTGGTGCAGCTCAAGCCTCGTG +
Preference number: 5 (lower is better)
Translates to: CQDPQSPGGAEGSTI*RPRTHSAWCSSSLV
Trigger: CACGAGGCTTGAGCTGCACCAGGCACTGTGGGTCCTTGGCCTGCAGATGGTGGAACCCTCGGCTCCTCCTGGACTCTGAGGGTCCTGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487303.1
ENST00000488738.5
CDS CCA 90 bp TCCAGCCGAAGTCCTGGCTCATGGAGACGGTGCAGATGGGCATGCTaGAGCGGGCGCAGTACAGAAGGCATGTGCCCAGCAGCAGCGTCC +
Preference number: 5 (lower is better)
Translates to: SSRSPGSWRRCRWAC*SGRSTEGMCPAAAS
Trigger: GGACGCTGCTGCTGGGCACATGCCTTCTGTACTGCGCCCGCTCCAGCATGCCCATCTGCACCGTCTCCATGAGCCAGGACTTCGGCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370349.7
ENST00000370351.9
ENST00000411611.1
ENST00000488738.5
CDS CCA 90 bp CTGCTGAGCACGATGCCGGCCTCCTTCTTGTTCCAGCCGAAGTCCTaGCTCATGGAGACGGTGCAGATGGGCATGCTGGAGCGGGCGCAG +
Preference number: 5 (lower is better)
Translates to: LLSTMPASFLFQPKS*LMETVQMGMLERAQ
Trigger: CTGCGCCCGCTCCAGCATGCCCATCTGCACCGTCTCCATGAGCCAGGACTTCGGCTGGAACAAGAAGGAGGCCGGCATCGTGCTCAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370349.7
ENST00000370351.9
ENST00000411611.1
ENST00000488738.5
CDS CCA 90 bp GTTCCAGAGGGGTCAGCAGGCCTCGTCCATGCCTCAGGTTGCACATaGGCGCCAGCCTCCCTTGGCCTCCCCTACCAGACACCTAACAGG +
Preference number: 5 (lower is better)
Translates to: VPEGSAGLVHASGCT*APASLGLPYQTPNR
Trigger: CCTGTTAGGTGTCTGGTAGGGGAGGCCAAGGGAGGCTGGCGCCCATGTGCAACCTGAGGCATGGACGAGGCCTGCTGACCCCTCTGGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488738.5
CDS TCA 90 bp GGCCGCCCACAACCTGTGTCAGGCAGTAGCCCCAGAAGAAGCTGCTaGGCACGATGCCGGCCTCCTTCTTGTTCCAGCCGAAGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: GRPQPVSGSSPRRSC*ARCRPPSCSSRSPG
Trigger: GCCAGGACTTCGGCTGGAACAAGAAGGAGGCCGGCATCGTGCTCAGCAGCTTCTTCTGGGGCTACTGCCTGACACAGGTTGTGGGCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370349.7
ENST00000370351.9
ENST00000411611.1
ENST00000488738.5
CDS GCA 90 bp TCCATGCCTGGCACTCGGGCCTGGCCTCCTGACTGTCCTGGCGCCTaGTTGTCAGGGTCATGCATACACAGGGTGGTTCCACCTGGACCA +
Preference number: 5 (lower is better)
Translates to: SMPGTRAWPPDCPGA*LSGSCIHRVVPPGP
Trigger: TGGTCCAGGTGGAACCACCCTGTGTATGCATGACCCTGACAAGCAGGCGCCAGGACAGTCAGGAGGCCAGGCCCGAGTGCCAGGCATGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370349.7
CDS GCA 90 bp TGTTCCAGCCGAAGTCCTGGCTCATGGAGACGGTGCAGATGGGCATaGTGGAGCGGGCGCAGTACAGAAGGCATGTGCCCAGCAGCAGCG +
Preference number: 5 (lower is better)
Translates to: CSSRSPGSWRRCRWA*WSGRSTEGMCPAAA
Trigger: CGCTGCTGCTGGGCACATGCCTTCTGTACTGCGCCCGCTCCAGCATGCCCATCTGCACCGTCTCCATGAGCCAGGACTTCGGCTGGAACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370349.7
ENST00000370351.9
ENST00000411611.1
ENST00000488738.5
CDS CCA 90 bp GTGGCGGAGCCGCTGACAGCTCAGCACCCGAGCGCTTTTCCTCACTaGCGGATTCTTTGGGAGGTCAAAGCCATCGTCTCCGGGCTCCTG +
Preference number: 5 (lower is better)
Translates to: VAEPLTAQHPSAFPH*RILWEVKAIVSGLL
Trigger: CAGGAGCCCGGAGACGATGGCTTTGACCTCCCAAAGAATCCGCCAGTGAGGAAAAGCGCTCGGGTGCTGAGCTGTCAGCGGCTCCGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488738.5
CDS CCA 90 bp TGGCGACTCATGAGCCACCTGCCGTCAGCAAAGTCCAGTGGAACCTaGAAGGCAGCCCCATCCTCCTCTCCTGGGCCTGCTCTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: WRLMSHLPSAKSSGT*KAAPSSSPGPALGS
Trigger: AGACCCCAGAGCAGGCCCAGGAGAGGAGGATGGGGCTGCCTTCCAGGTTCCACTGGACTTTGCTGACGGCAGGTGGCTCATGAGTCGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488738.5
CDS CCA 90 bp GGGCAGATGGCGACTCATGAGCCACCTGCCGTCAGCAAAGTCCAGTaGAACCTGGAAGGCAGCCCCATCCTCCTCTCCTGGGCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: GQMATHEPPAVSKVQ*NLEGSPILLSWACS
Trigger: AGAGCAGGCCCAGGAGAGGAGGATGGGGCTGCCTTCCAGGTTCCACTGGACTTTGCTGACGGCAGGTGGCTCATGAGTCGCCATCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488738.5
CDS CCA 90 bp CTCAGCGGGGCCAGGAGGTGTCCCGGGGACCCTGGGCTACCAGGATaGGAACATATCTGTGAGTCAGGGCAGATGGCGACTCATGAGCCA +
Preference number: 5 (lower is better)
Translates to: LSGARRCPGDPGLPG*EHICESGQMATHEP
Trigger: TGGCTCATGAGTCGCCATCTGCCCTGACTCACAGATATGTTCCCATCCTGGTAGCCCAGGGTCCCCGGGACACCTCCTGGCCCCGCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488738.5
CDS TCA 90 bp CACCGGCCGGCTTTGGGCCAGGACACCCAAGGCCAGGATGAGATCTaGGGGAGCAACGGTTTCAAACTGATGGCTATCAGGGCGGGAGGC +
Preference number: 5 (lower is better)
Translates to: HRPALGQDTQGQDEI*GSNGFKLMAIRAGG
Trigger: GCCTCCCGCCCTGATAGCCATCAGTTTGAAACCGTTGCTCCCTCAGATCTCATCCTGGCCTTGGGTGTCCTGGCCCAAAGCCGGCCGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487303.1
ENST00000488738.5
CDS GCA 90 bp CGGCCTCCTTCTTGTTCCAGCCGAAGTCCTGGCTCATGGAGACGGTaGAGATGGGCATGCTGGAGCGGGCGCAGTACAGAAGGCATGTGC +
Preference number: 5 (lower is better)
Translates to: RPPSCSSRSPGSWRR*RWACWSGRSTEGMC
Trigger: GCACATGCCTTCTGTACTGCGCCCGCTCCAGCATGCCCATCTGCACCGTCTCCATGAGCCAGGACTTCGGCTGGAACAAGAAGGAGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370349.7
ENST00000370351.9
ENST00000411611.1
ENST00000488738.5
CDS CCA 90 bp GCACGATGCCGGCCTCCTTCTTGTTCCAGCCGAAGTCCTGGCTCATaGAGACGGTGCAGATGGGCATGCTGGAGCGGGCGCAGTACAGAA +
Preference number: 5 (lower is better)
Translates to: ARCRPPSCSSRSPGS*RRCRWACWSGRSTE
Trigger: TTCTGTACTGCGCCCGCTCCAGCATGCCCATCTGCACCGTCTCCATGAGCCAGGACTTCGGCTGGAACAAGAAGGAGGCCGGCATCGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370349.7
ENST00000370351.9
ENST00000411611.1
ENST00000488738.5
CDS CCA 90 bp TGGCGCCTGCTTGTCAGGGTCATGCATACACAGGGTGGTTCCACCTaGCGAGGGGTATGCCTCCTGACTGTCCAGGACAATGCCCCTGGC +
Preference number: 5 (lower is better)
Translates to: WRLLVRVMHTQGGST*RGVCLLTVQDNAPG
Trigger: GCCAGGGGCATTGTCCTGGACAGTCAGGAGGCATACCCCTCGCCAGGTGGAACCACCCTGTGTATGCATGACCCTGACAAGCAGGCGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411611.1
CDS-3UTR CAA 90 bp AGGCTTCTAGGAGACACAGAGACTCTGAGGTCGTGTCTCGAGGGTGGCTACCTGGTGGCTGCATCGGGCTaGGGGTGCTCAGACGGCGTG +
Preference number: 5 (lower is better)
Translates to: RLLGDTETLRSCLEGGYLVAASG*GCSDGV
Trigger: CACGCCGTCTGAGCACCCCAAGCCCGATGCAGCCAC...CAGGTAGCCACCCTCGAGACACGACCTCAGAGTCTCTGTGTCTCCTAGAAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS TCA 90 bp CAGGGCAGGGAAGTAAACCCCTTGGAGCAAGCCCATGAGGATGCGTaGGAAGGTCATGAAGGCCAGGTGGGCACTGCTCAGGTGGGCGAG +
Preference number: 5 (lower is better)
Translates to: QGREVNPLEQAHEDA*EGHEGQVGTAQVGE
Trigger: CTCGCCCACCTGAGCAGTGCCCACCTGGCCTTCATGACCTTCTCACGCATCCTCATGGGCTTGCTCCAAGGGGTTTACTTCCCTGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370349.7
ENST00000370351.9
ENST00000488738.5
CDS TCA 90 bp GCCTGGACACCGGCCGGCTTTGGGCCAGGACACCCAAGGCCAGGATaGGATCTGAGGGAGCAACGGTTTCAAACTGATGGCTATCAGGGC +
Preference number: 5 (lower is better)
Translates to: AWTPAGFGPGHPRPG*DLREQRFQTDGYQG
Trigger: GCCCTGATAGCCATCAGTTTGAAACCGTTGCTCCCTCAGATCTCATCCTGGCCTTGGGTGTCCTGGCCCAAAGCCGGCCGGTGTCCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487303.1
ENST00000488738.5
CDS CCA 90 bp CCTTCTTGTTCCAGCCGAAGTCCTGGCTCATGGAGACGGTGCAGATaGGCATGCTGGAGCGGGCGCAGTACAGAAGGCATGTGCCCAGCA +
Preference number: 5 (lower is better)
Translates to: PSCSSRSPGSWRRCR*ACWSGRSTEGMCPA
Trigger: TGCTGGGCACATGCCTTCTGTACTGCGCCCGCTCCAGCATGCCCATCTGCACCGTCTCCATGAGCCAGGACTTCGGCTGGAACAAGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370349.7
ENST00000370351.9
ENST00000411611.1
ENST00000488738.5
CDS CCA 90 bp AGCCGTCTCCAGGGGACTCTGTTGTGCCTGGACACCGGCCGGCTTTaGGCCAGGACACCCAAGGCCAGGATGAGATCTTTTTCACTCAGC +
Preference number: 5 (lower is better)
Translates to: SRLQGTLLCLDTGRL*ARTPKARMRSFSLS
Trigger: GCTGAGTGAAAAAGATCTCATCCTGGCCTTGGGTGTCCTGGCCCAAAGCCGGCCGGTGTCCAGGCACAACAGAGTCCCCTGGAGACGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CAA 90 bp AGACCCCACAGCAGCGTCCAGCAGTCCAGCAGGACCGTCCCGAAGCCTCTGTGGAGGGAAGTAAACCCCTaGGAGCAAGCCCATGAGGAT +
Preference number: 5 (lower is better)
Translates to: RPHSSVQQSSRTVPKPLWREVNP*EQAHED
Trigger: ATCCTCATGGGCTTGCTCCAAGGGGTTTACTTCCCT...CCACAGAGGCTTCGGGACGGTCCTGCTGGACTGCTGGACGCTGCTGTGGGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR CAA 90 bp GGACAGCTGATAGCAGGGTACATCGCTGTCATCTGTGGACACGCAGGACCCCTGTGGGGGCCCCACATCTaGGGAAAGCTGGGTGGACAG +
Preference number: 5 (lower is better)
Translates to: GQLIAGYIAVICGHAGPLWGPHI*GKLGGQ
Trigger: CTGTCCACCCAGCTTTCCCAAGATGTGGGGCCCCCA...CAGGGGTCCTGCGTGTCCACAGATGACAGCGATGTACCCTGCTATCAGCTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS TCA 90 bp TCCCTTGGCCTCCCCTACCAGACACCTAACAGGCAGCATCACCTTTaGGAACCGCGTTCTGAACGACCCTCCACACGGCCTCCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: SLGLPYQTPNRQHHL*EPRSERPSTRPPPE
Trigger: CTCTGGAGGAGGCCGTGTGGAGGGTCGTTCAGAACGCGGTTCTCAAAGGTGATGCTGCCTGTTAGGTGTCTGGTAGGGGAGGCCAAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488738.5
CDS GCA 90 bp CTGCACCCTGCCTTGACCTGTGCCCAGCAGGTCTTCCTGGGTGTCTaGCTTAGCCCTAGATGGAACCTTCCAGATCGAATTGGGTGGCGG +
Preference number: 5 (lower is better)
Translates to: LHPALTCAQQVFLGV*LSPRWNLPDRIGWR
Trigger: CCGCCACCCAATTCGATCTGGAAGGTTCCATCTAGGGCTAAGGCAGACACCCAGGAAGACCTGCTGGGCACAGGTCAAGGCAGGGTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488738.5
CDS CCA 90 bp CTGACTGTCCTGGCGCCTGCTTGTCAGGGTCATGCATACACAGGGTaGTTCCACCTGGCGAGGGGTATGCCTCCTGACTGTCCAGGACAA +
Preference number: 5 (lower is better)
Translates to: LTVLAPACQGHAYTG*FHLARGMPPDCPGQ
Trigger: TTGTCCTGGACAGTCAGGAGGCATACCCCTCGCCAGGTGGAACCACCCTGTGTATGCATGACCCTGACAAGCAGGCGCCAGGACAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411611.1
CDS-3UTR CAA 90 bp GAACCACGCGGAACAGATCGTGGTGGGAATGAGGCTGCGCCTACTAACAATAACCTCCAGGGGACTCTGTaGTGCCTGGACACCGGCCGG +
Preference number: 5 (lower is better)
Translates to: EPRGTDRGGNEAAPTNNNLQGTL*CLDTGR
Trigger: CCGGCCGGTGTCCAGGCACAACAGAGTCCCCTGGAG...GTTATTGTTAGTAGGCGCAGCCTCATTCCCACCACGATCTGTTCCGCGTGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CAA 90 bp TTGTCTGACTGGGAGCTGCTGGCTAGGGGTGGGTGGAGGCCAGGGATACCTTTATTGAAGATCCAGCCCTaGGCGTCGGGGAAGGTCTCC +
Preference number: 5 (lower is better)
Translates to: LSDWELLARGGWRPGIPLLKIQP*ASGKVS
Trigger: GGAGACCTTCCCCGACGCCAAGGGCTGGATCTTCAA...TAAAGGTATCCCTGGCCTCCACCCACCCCTAGCCAGCAGCTCCCAGTCAGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CAA 90 bp GTGGTGGGAATGAGGCTGCGCCTACTAACAATAACCCCACCCACCCTGACGGCCAAGGCCCCGGCTGTGTaGGCCACACCAAACAGAAAG +
Preference number: 5 (lower is better)
Translates to: VVGMRLRLLTITPPTLTAKAPAV*ATPNRK
Trigger: CTTTCTGTTTGGTGTGGCCAACACAGCCGGGGCCTT...GGCCGTCAGGGTGGGTGGGGTTATTGTTAGTAGGCGCAGCCTCATTCCCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CAA 90 bp CGTCTGCCCACTGAGAACACTGTTAGTGCGGAGGGATCCACAGGAGGGGAGAGCAAGGCCCCGGCTGTGTaGGCCACACCAAACAGAAAG +
Preference number: 5 (lower is better)
Translates to: RLPTENTVSAEGSTGGESKAPAV*ATPNRK
Trigger: CTTTCTGTTTGGTGTGGCCAACACAGCCGGGGCCTT...GCTCTCCCCTCCTGTGGATCCCTCCGCACTAACAGTGTTCTCAGTGGGCAGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CAA 90 bp TCACCAGGCCTGGGAAAGCCATGCGGGTTCGAGAGCCTGCGCCATGGCCATGCTAGACATTTCTGGCTGTaGTCTGACTGGGAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: SPGLGKPCGFESLRHGHARHFWL*SDWELL
Trigger: CAGCAGCTCCCAGTCAGACAACAGCCAGAAATGTCT...AGCATGGCCATGGCGCAGGCTCTCGAACCCGCATGGCTTTCCCAGGCCTGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CAA 90 bp TTGTCTGACTGGGAGCTGCTGGCTAGGGGTGGGTGGAGGCCAGGGATACCTTTATGTCCTGGCGCCTGCTaGTCAGGGTCATGCATACAC +
Preference number: 5 (lower is better)
Translates to: LSDWELLARGGWRPGIPLCPGAC*SGSCIH
Trigger: GTGTATGCATGACCCTGACAAGCAGGCGCCAGGACA...TAAAGGTATCCCTGGCCTCCACCCACCCCTAGCCAGCAGCTCCCAGTCAGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370349.7
CDS-3UTR CAA 90 bp GGACTCTTCTTAAGGAGCTTCAGGCTCCACAGTGGTTTGTGTTCCTCTCTGCTCCTCCAGGGGACTCTGTaGTGCCTGGACACCGGCCGG +
Preference number: 5 (lower is better)
Translates to: GLFLRSFRLHSGLCSSLLLQGTL*CLDTGR
Trigger: CCGGCCGGTGTCCAGGCACAACAGAGTCCCCTGGAG...GAGCAGAGAGGAACACAAACCACTGTGGAGCCTGAAGCTCCTTAAGAAGAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS TCA 90 bp AGCCCTAGATGGAACCTTCCAGATCGAATTGGGTGGCGGAGCCGCTaGCAGCTCAGCACCCGAGCGCTTTTCCTCACTGGCGGATTCTTT +
Preference number: 5 (lower is better)
Translates to: SPRWNLPDRIGWRSR*QLSTRALFLTGGFF
Trigger: AAAGAATCCGCCAGTGAGGAAAAGCGCTCGGGTGCTGAGCTGTCAGCGGCTCCGCCACCCAATTCGATCTGGAAGGTTCCATCTAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488738.5
CDS CCA 90 bp TTGGCCACACCAAACAGAAAGCCGGCGCAGGACGGGGCCAAGTCCTaGATGTTAACAGAAATGCCACTGTGGTTGAAGGTCTGGAGGCCG +
Preference number: 5 (lower is better)
Translates to: LATPNRKPAQDGAKS*MLTEMPLWLKVWRP
Trigger: CGGCCTCCAGACCTTCAACCACAGTGGCATTTCTGTTAACATCCAGGACTTGGCCCCGTCCTGCGCCGGCTTTCTGTTTGGTGTGGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370349.7
ENST00000370351.9
ENST00000459704.6
ENST00000483113.1
ENST00000488738.5
CDS-3UTR CAA 90 bp TTGTCTGACTGGGAGCTGCTGGCTAGGGGTGGGTGGAGGCCAGGGATACCTTTAAACCAAGGAACCACGTaGAAGATCCAGCCCTTGGCG +
Preference number: 5 (lower is better)
Translates to: LSDWELLARGGWRPGIPLNQGTT*KIQPLA
Trigger: CGCCAAGGGCTGGATCTTCAACGTGGTTCCTTGGTT...TAAAGGTATCCCTGGCCTCCACCCACCCCTAGCCAGCAGCTCCCAGTCAGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CAA 90 bp GGTAGAAAGAACGCCAGAAAGGTGGGTCTGTGTGTTCTGGGGTGCGTGGGGCCCATGATGGCCACAAGGTaGAACAGGCAAGTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: GRKNARKVGLCVLGCVGPMMATR*NRQVQE
Trigger: CTCCTGGACTTGCCTGTTCAACCTTGTGGCCATCAT...GGGCCCCACGCACCCCAGAACACACAGACCCACCTTTCTGGCGTTCTTTCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CAA 90 bp TTGTCTGACTGGGAGCTGCTGGCTAGGGGTGGGTGGAGGCCAGGGATACCTTTAAGGCTCCACAGTGGTTaGTGTTCCTCTCTGCTCGTG +
Preference number: 5 (lower is better)
Translates to: LSDWELLARGGWRPGIPLRLHSG*CSSLLV
Trigger: CACGAGCAGAGAGGAACACAAACCACTGTGGAGCCT...TAAAGGTATCCCTGGCCTCCACCCACCCCTAGCCAGCAGCTCCCAGTCAGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS GCA 90 bp AGCAGCGTCCTGGGACCAGCCACGCATGTGTCCCAGTCGGGCGGCTaGTGTGGAACTCACATTGTTTTTCACATCTTGCTTCTAGGCCTT +
Preference number: 5 (lower is better)
Translates to: SSVLGPATHVSQSGG*CGTHIVFHILLLGL
Trigger: AAGGCCTAGAAGCAAGATGTGAAAAACAATGTGAGTTCCACAGCAGCCGCCCGACTGGGACACATGCGTGGCTGGTCCCAGGACGCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459704.6
CDS-3UTR CAA 90 bp AGGCTTCTAGGAGACACAGAGACTCTGAGGTCGTGTCTCGAGGGTGGCTACCTGGAAATGCCACTGTGGTaGAAGGTCTGGAGGCCGATG +
Preference number: 5 (lower is better)
Translates to: RLLGDTETLRSCLEGGYLEMPLW*KVWRPM
Trigger: CATCGGCCTCCAGACCTTCAACCACAGTGGCATTTC...CAGGTAGCCACCCTCGAGACACGACCTCAGAGTCTCTGTGTCTCCTAGAAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CAA 90 bp AAACCACCAGCTCCTCAGGCAACGAAAAGGGAGGTAGAAAGAACGCCAGAAAGGTTGAAGATCCAGCCCTaGGCGTCGGGGAAGGTCTCC +
Preference number: 5 (lower is better)
Translates to: KPPAPQATKREVERTPERLKIQP*ASGKVS
Trigger: GGAGACCTTCCCCGACGCCAAGGGCTGGATCTTCAA...CCTTTCTGGCGTTCTTTCTACCTCCCTTTTCGTTGCCTGAGGAGCTGGTGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CAA 90 bp ACCTTGCAAGATGTATCATTAACTCATGAAACCACCAGCTCCTCAGGCAACGAAGGCGCTGCAGGAGGCTaGCGGAGAACACGGCGACCG +
Preference number: 5 (lower is better)
Translates to: TLQDVSLTHETTSSSGNEGAAGG*RRTRRP
Trigger: CGGTCGCCGTGTTCTCCGCAAGCCTCCTGCAGCGCC...TTCGTTGCCTGAGGAGCTGGTGGTTTCATGAGTTAATGATACATCTTGCAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS TCA 90 bp CAAGGCCAGGATGAGATCTGTACACGTACCACACCCAAAGCAAGGTaGGGCCGCCGGAGAAATAGAAGATGCTCTGCCAGCCGTACCATT +
Preference number: 5 (lower is better)
Translates to: QGQDEICTRTTPKAR*GRRRNRRCSASRTI
Trigger: AATGGTACGGCTGGCAGAGCATCTTCTATTTCTCCGGCGGCCTCACCTTGCTTTGGGTGTGGTACGTGTACAGATCTCATCCTGGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459704.6
CDS-3UTR CAA 90 bp ACAGATCGTGGTGGGAATGAGGCTGCGCCTACTAACAATAACCCCACCCACCCTAGGGAAGTAAACCCCTaGGAGCAAGCCCATGAGGAT +
Preference number: 5 (lower is better)
Translates to: TDRGGNEAAPTNNNPTHPREVNP*EQAHED
Trigger: ATCCTCATGGGCTTGCTCCAAGGGGTTTACTTCCCT...AGGGTGGGTGGGGTTATTGTTAGTAGGCGCAGCCTCATTCCCACCACGATCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CAA 90 bp AAGGAGCTTCAGGCTCCACAGTGGTTTGTGTTCCTCTCTGCTCGTGTGTCTGACGAAATGCCACTGTGGTaGAAGGTCTGGAGGCCGATG +
Preference number: 5 (lower is better)
Translates to: KELQAPQWFVFLSARVSDEMPLW*KVWRPM
Trigger: CATCGGCCTCCAGACCTTCAACCACAGTGGCATTTC...GTCAGACACACGAGCAGAGAGGAACACAAACCACTGTGGAGCCTGAAGCTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CAA 90 bp TTAAGCATCCTACAGTGTGCAGGACAGCTCCCACCAAGGAGGACAGCCCGCCAGGTGCAAAACTCCACTTaGTCTTTCCACAGCACAGCT +
Preference number: 5 (lower is better)
Translates to: LSILQCAGQLPPRRTARQVQNST*SFHSTA
Trigger: AGCTGTGCTGTGGAAAGACAAAGTGGAGTTTTGCAC...CTGGCGGGCTGTCCTCCTTGGTGGGAGCTGTCCTGCACACTGTAGGATGCTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS TCA 90 bp TTTCACTCAGCAGGTACCTGTACACGTACCACACCCAAAGCAAGGTaGGGCCGCCGGAGAAATAGAAGATGCTCTGCCAGCCGTACCATT +
Preference number: 5 (lower is better)
Translates to: FHSAGTCTRTTPKAR*GRRRNRRCSASRTI
Trigger: AATGGTACGGCTGGCAGAGCATCTTCTATTTCTCCGGCGGCCTCACCTTGCTTTGGGTGTGGTACGTGTACAGGTACCTGCTGAGTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370349.7
ENST00000370351.9
ENST00000488738.5
CDS-3UTR CAA 90 bp TACACCTTGCAAGATGTATCATTAACTCATGAAACCACCAGCTCCTCAGGCAACAACCAAGGAACCACGTaGAAGATCCAGCCCTTGGCG +
Preference number: 5 (lower is better)
Translates to: YTLQDVSLTHETTSSSGNNQGTT*KIQPLA
Trigger: CGCCAAGGGCTGGATCTTCAACGTGGTTCCTTGGTT...GTTGCCTGAGGAGCTGGTGGTTTCATGAGTTAATGATACATCTTGCAAGGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370349.7
ENST00000370351.9
CDS-3UTR CAA 90 bp CACTCGTTTCCTCATGAAATTAGTTACAGAAAGTCTTTAACACGTGTTCATTCTGCGACCGAGGGAGGTTaGGCGGGAACCACGCGGAAC +
Preference number: 5 (lower is better)
Translates to: HSFPHEISYRKSLTRVHSATEGG*AGTTRN
Trigger: GTTCCGCGTGGTTCCCGCCAAACCTCCCTCGGTCGC...AGAATGAACACGTGTTAAAGACTTTCTGTAACTAATTTCATGAGGAAACGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR CAA 90 bp CTTGTGACAAAACTGATAAAACCGAAGGACACTCTGCTGAGTGAAGTAAGCCAGATGATGGCCACAAGGTaGAACAGGCAAGTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: LVTKLIKPKDTLLSEVSQMMATR*NRQVQE
Trigger: CTCCTGGACTTGCCTGTTCAACCTTGTGGCCATCAT...CTGGCTTACTTCACTCAGCAGAGTGTCCTTCGGTTTTATCAGTTTTGTCACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS-3UTR CAA 90 bp CTCTTCTTAAGGAGCTTCAGGCTCCACAGTGGTTTGTGTTCCTCTCTGCTCGTGATTGTAGGGGAACATTaGTGCTCAAGTGCAAAACTC +
Preference number: 5 (lower is better)
Translates to: LFLRSFRLHSGLCSSLLVIVGEH*CSSAKL
Trigger: GAGTTTTGCACTTGAGCACAAATGTTCCCCTACAAT...CACGAGCAGAGAGGAACACAAACCACTGTGGAGCCTGAAGCTCCTTAAGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370351.9
CDS TCA 72 bp ACCCACGACACCTGCCCAAGAGAGGGCCAGGCGGGCTaGGTGCTCCCGGGCAGCCCAGGCCCCACACCCCAC +
Preference number: 6 (lower is better)
Translates to: THDTCPREGQAG*VLPGSPGPTPH
Trigger: GTGGGGTGTGGGGCCTGGGCTGCCCGGGAGCACTCAGCCCGCCTGGCCCTCTCTTGGGCAGGTGTCGTGGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488738.5
CDS GCA 72 bp CCGGCCATGTCCCTGCGGGCCTCGTCTGGGGGTGGCTaGATCGGGCTTGGGGTGCTCAGACGGCGTGGGCAC +
Preference number: 6 (lower is better)
Translates to: PAMSLRASSGGG*IGLGVLRRRGH
Trigger: GTGCCCACGCCGTCTGAGCACCCCAAGCCCGATGCAGCCACCCCCAGACGAGGCCCGCAGGGACATGGCCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370349.7
ENST00000370351.9
ENST00000488738.5
CDS CCA 72 bp CCTGCGGGCCTCGTCTGGGGGTGGCTGCATCGGGCTTaGGGTGCTCAGACGGCGTGGGCACAGCTGTGTCCC +
Preference number: 6 (lower is better)
Translates to: PAGLVWGWLHRA*GAQTAWAQLCP
Trigger: GGGACACAGCTGTGCCCACGCCGTCTGAGCACCCCAAGCCCGATGCAGCCACCCCCAGACGAGGCCCGCAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370349.7
ENST00000370351.9
ENST00000488738.5
CDS CAA 72 bp CCCTGCGGGCCTCGTCTGGGGGTGGCTGCATCGGGCTaGGGGTGCTCAGACGGCGTGGGCACAGCTGTGTCC +
Preference number: 6 (lower is better)
Translates to: PCGPRLGVAASG*GCSDGVGTAVS
Trigger: GGACACAGCTGTGCCCACGCCGTCTGAGCACCCCAAGCCCGATGCAGCCACCCCCAGACGAGGCCCGCAGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370349.7
ENST00000370351.9
ENST00000488738.5
CDS CAA 72 bp GGCGCTCCTTCACCCTGCGGGAGCCCCCGACTCACCTaGGCGTCGGGGAAGGTCTCCTCGAAGAAGGTGGGC +
Preference number: 6 (lower is better)
Translates to: GAPSPCGSPRLT*ASGKVSSKKVG
Trigger: GCCCACCTTCTTCGAGGAGACCTTCCCCGACGCCAAGGTGAGTCGGGGGCTCCCGCAGGGTGAAGGAGCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000487303.1
ENST00000488738.5
CDS CAA 90 bp TGCCTTCTGGGCGCTCCTTCACCCTGCGGGAGCCCCCGACTCACCTaGGCGTCGGGGAAGGTCTCCTCGAAGAAGGTGGGCAGCCAGGAG +
Preference number: 6 (lower is better)
Translates to: CLLGAPSPCGSPRLT*ASGKVSSKKVGSQE
Trigger: CTCCTGGCTGCCCACCTTCTTCGAGGAGACCTTCCCCGACGCCAAGGTGAGTCGGGGGCTCCCGCAGGGTGAAGGAGCGCCCAGAAGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000487303.1
ENST00000488738.5
CDS GCA 72 bp CCAGAGGGGTCAGCAGGCCTCGTCCATGCCTCAGGTTaGACATGGGCGCCAGCCTCCCTTGGCCTCCCCTAC +
Preference number: 6 (lower is better)
Translates to: PEGSAGLVHASG*TWAPASLGLPY
Trigger: GTAGGGGAGGCCAAGGGAGGCTGGCGCCCATGTGCAACCTGAGGCATGGACGAGGCCTGCTGACCCCTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488738.5
CDS GCA 72 bp GGGGGTGGTTCCAGAGGGGTCAGCAGGCCTCGTCCATaGCTCAGGTTGCACATGGGCGCCAGCCTCCCTTGG +
Preference number: 6 (lower is better)
Translates to: GGGSRGVSRPRP*LRLHMGASLPW
Trigger: CCAAGGGAGGCTGGCGCCCATGTGCAACCTGAGGCATGGACGAGGCCTGCTGACCCCTCTGGAACCACCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488738.5
CDS GCA 72 bp CAAGGACCCACAGTGCCTGGTGCAGCTCAAGCCTCGTaGCTTCTGGGCGCTCCTTCACCCTGCGGGAGCCCC +
Preference number: 6 (lower is better)
Translates to: QGPTVPGAAQAS*LLGAPSPCGSP
Trigger: GGGGCTCCCGCAGGGTGAAGGAGCGCCCAGAAGGCACGAGGCTTGAGCTGCACCAGGCACTGTGGGTCCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487303.1
ENST00000488738.5
CDS CCA 72 bp CCACAGTGCCTGGTGCAGCTCAAGCCTCGTGCCTTCTaGGCGCTCCTTCACCCTGCGGGAGCCCCCGACTCA +
Preference number: 6 (lower is better)
Translates to: PQCLVQLKPRAF*ALLHPAGAPDS
Trigger: TGAGTCGGGGGCTCCCGCAGGGTGAAGGAGCGCCCAGAAGGCACGAGGCTTGAGCTGCACCAGGCACTGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000487303.1
ENST00000488738.5
CDS GCA 72 bp TGGGCATGCTGGAGCGGGCGCAGTACAGAAGGCATGTaGCCAGCAGCAGCGTCCCCGTCCATGCCTGGCACT +
Preference number: 6 (lower is better)
Translates to: WACWSGRSTEGM*PAAASPSMPGT
Trigger: AGTGCCAGGCATGGACGGGGACGCTGCTGCTGGGCACATGCCTTCTGTACTGCGCCCGCTCCAGCATGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370349.7
ENST00000370351.9
ENST00000411611.1
ENST00000488738.5
CDS CCA 72 bp TCCGGAAGAGCCGTCTCCAGGGGACTCTGTTGTGCCTaGACACCGGCCGGCTTTGGGCCAGGACACCCAAGG +
Preference number: 6 (lower is better)
Translates to: SGRAVSRGLCCA*TPAGFGPGHPR
Trigger: CCTTGGGTGTCCTGGCCCAAAGCCGGCCGGTGTCCAGGCACAACAGAGTCCCCTGGAGACGGCTCTTCCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370349.7
ENST00000370351.9
ENST00000459704.6
ENST00000487303.1
ENST00000488738.5
CDS CCA 72 bp GGGTCAGCAGGCCTCGTCCATGCCTCAGGTTGCACATaGGCGCCAGCCTCCCTTGGCCTCCCCTACCAGACA +
Preference number: 6 (lower is better)
Translates to: GSAGLVHASGCT*APASLGLPYQT
Trigger: TGTCTGGTAGGGGAGGCCAAGGGAGGCTGGCGCCCATGTGCAACCTGAGGCATGGACGAGGCCTGCTGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488738.5
CDS CAA 90 bp ATGCCTGGCACTCGGGCCTGGCCTCCTGACTGTCCTGGCGCCTGCTaGTCAGGGTCATGCATACACAGGGTGGTTCCACCTGGCGAGGGG +
Preference number: 6 (lower is better)
Translates to: MPGTRAWPPDCPGAC*SGSCIHRVVPPGEG
Trigger: CCCCTCGCCAGGTGGAACCACCCTGTGTATGCATGACCCTGACAAGCAGGCGCCAGGACAGTCAGGAGGCCAGGCCCGAGTGCCAGGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411611.1
CDS CAA 90 bp GAGCCCCCTGGCCACCCAAAGACTCGGCTGCTCCTGCACCCTGCCTaGACCTGTGCCCAGCAGGTCTTCCTGGGTGTCTGCCTTAGCCCT +
Preference number: 6 (lower is better)
Translates to: EPPGHPKTRLLLHPA*TCAQQVFLGVCLSP
Trigger: AGGGCTAAGGCAGACACCCAGGAAGACCTGCTGGGCACAGGTCAAGGCAGGGTGCAGGAGCAGCCGAGTCTTTGGGTGGCCAGGGGGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488738.5
CDS GCA 72 bp GGCAGCTGTGGGCGCCCGGGACTAGCCCGCCCGGCCTaGGTTACCTTTTTCACTCAGCAGGTACCTGTACAC +
Preference number: 6 (lower is better)
Translates to: GSCGRPGLARPA*VTFFTQQVPVH
Trigger: GTGTACAGGTACCTGCTGAGTGAAAAAGGTAACGCAGGCCGGGCGGGCTAGTCCCGGGCGCCCACAGCTGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488738.5
CDS GCA 72 bp CGAGGGTTCCACCATCTGCAGGCCAAGGACCCACAGTaGCTGGTGCAGCTCAAGCCTCGTGCCTTCTGGGCG +
Preference number: 6 (lower is better)
Translates to: RGFHHLQAKDPQ*LVQLKPRAFWA
Trigger: CGCCCAGAAGGCACGAGGCTTGAGCTGCACCAGGCACTGTGGGTCCTTGGCCTGCAGATGGTGGAACCCTCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487303.1
ENST00000488738.5
CDS TCA 72 bp TCCCAAACTGGGAGCCGGCGCCCACGATGCTGTAGGTaGAGGCTCGCTCACTCTCCCGCACCTTCTGCGACA +
Preference number: 6 (lower is better)
Translates to: SQTGSRRPRCCR*RLAHSPAPSAT
Trigger: TGTCGCAGAAGGTGCGGGAGAGTGAGCGAGCCTTCACCTACAGCATCGTGGGCGCCGGCTCCCAGTTTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370349.7
ENST00000370351.9
ENST00000488738.5
CDS GCA 72 bp TCCACCATCTGCAGGCCAAGGACCCACAGTGCCTGGTaGAGCTCAAGCCTCGTGCCTTCTGGGCGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: STICRPRTHSAW*SSSLVPSGRSF
Trigger: GAAGGAGCGCCCAGAAGGCACGAGGCTTGAGCTGCACCAGGCACTGTGGGTCCTTGGCCTGCAGATGGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487303.1
ENST00000488738.5
CDS GCA 72 bp CCTCAGAGTCCAGGAGGAGCCGAGGGTTCCACCATCTaGAGGCCAAGGACCCACAGTGCCTGGTGCAGCTCA +
Preference number: 6 (lower is better)
Translates to: PQSPGGAEGSTI*RPRTHSAWCSS
Trigger: TGAGCTGCACCAGGCACTGTGGGTCCTTGGCCTGCAGATGGTGGAACCCTCGGCTCCTCCTGGACTCTGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487303.1
ENST00000488738.5
CDS CAA 90 bp ATGCCTGGCACTCGGGCCTGGCCTCCTGACTGTCCTGGCGCCTGCTaGTCAGGGTCATGCATACACAGGGTGGTTCCACCTGGACCACTG +
Preference number: 6 (lower is better)
Translates to: MPGTRAWPPDCPGAC*SGSCIHRVVPPGPL
Trigger: CAGTGGTCCAGGTGGAACCACCCTGTGTATGCATGACCCTGACAAGCAGGCGCCAGGACAGTCAGGAGGCCAGGCCCGAGTGCCAGGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370349.7
CDS CAA 90 bp GCCCTGCCTGGAAGAGCCCCAGGAACACTGGCTGGGATAGGGCACTaGCCAGGTCCGGTCCTGGAATCTCATGGCAGGGAGGAAGGACAG +
Preference number: 6 (lower is better)
Translates to: ALPGRAPGTLAGIGH*PGPVLESHGREEGQ
Trigger: CTGTCCTTCCTCCCTGCCATGAGATTCCAGGACCGGACCTGGCAAGTGCCCTATCCCAGCCAGTGTTCCTGGGGCTCTTCCAGGCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411611.1
CDS CAA 90 bp CAGGCCTCGTCCATGCCTCAGGTTGCACATGGGCGCCAGCCTCCCTaGGCCTCCCCTACCAGACACCTAACAGGCAGCATCACCTTTGAG +
Preference number: 6 (lower is better)
Translates to: QASSMPQVAHGRQPP*ASPTRHLTGSITFE
Trigger: CTCAAAGGTGATGCTGCCTGTTAGGTGTCTGGTAGGGGAGGCCAAGGGAGGCTGGCGCCCATGTGCAACCTGAGGCATGGACGAGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488738.5
CDS CCA 72 bp AGTCCTGGCTCATGGAGACGGTGCAGATGGGCATGCTaGAGCGGGCGCAGTACAGAAGGCATGTGCCCAGCA +
Preference number: 6 (lower is better)
Translates to: SPGSWRRCRWAC*SGRSTEGMCPA
Trigger: TGCTGGGCACATGCCTTCTGTACTGCGCCCGCTCCAGCATGCCCATCTGCACCGTCTCCATGAGCCAGGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370349.7
ENST00000370351.9
ENST00000411611.1
ENST00000488738.5
CDS CCA 72 bp GCGACTCATGAGCCACCTGCCGTCAGCAAAGTCCAGTaGAACCTGGAAGGCAGCCCCATCCTCCTCTCCTGG +
Preference number: 6 (lower is better)
Translates to: ATHEPPAVSKVQ*NLEGSPILLSW
Trigger: CCAGGAGAGGAGGATGGGGCTGCCTTCCAGGTTCCACTGGACTTTGCTGACGGCAGGTGGCTCATGAGTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488738.5
CDS TCA 72 bp GACTGGCCGGAATCGCCACCAACCAAGGAACCACGTTaGAGATCCAGCCCTTGGCGTCGGGGAAGGTCTCCT +
Preference number: 6 (lower is better)
Translates to: DWPESPPTKEPR*RSSPWRRGRSP
Trigger: AGGAGACCTTCCCCGACGCCAAGGGCTGGATCTTCAACGTGGTTCCTTGGTTGGTGGCGATTCCGGCCAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370349.7
ENST00000370351.9
ENST00000459704.6
CDS TCA 72 bp TGGAACCTTCCAGATCGAATTGGGTGGCGGAGCCGCTaGCAGCTCAGCACCCGAGCGCTTTTCCTCACTGGC +
Preference number: 6 (lower is better)
Translates to: WNLPDRIGWRSR*QLSTRALFLTG
Trigger: GCCAGTGAGGAAAAGCGCTCGGGTGCTGAGCTGTCAGCGGCTCCGCCACCCAATTCGATCTGGAAGGTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488738.5
CDS TCA 72 bp GACTGGCCGGAATCGCCACCAACCAAGGAACCACGTTaGAGATCCAGCCCGCAGGTGACCCCTCTGTCCACA +
Preference number: 6 (lower is better)
Translates to: DWPESPPTKEPR*RSSPQVTPLST
Trigger: TGTGGACAGAGGGGTCACCTGCGGGCTGGATCTTCAACGTGGTTCCTTGGTTGGTGGCGATTCCGGCCAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488738.5
CDS GCA 72 bp CCTCCTGACTGTCCTGGCGCCTGCTTGTCAGGGTCATaGATACACAGGGTGGTTCCACCTGGACCACTGGGT +
Preference number: 6 (lower is better)
Translates to: PPDCPGACLSGS*IHRVVPPGPLG
Trigger: ACCCAGTGGTCCAGGTGGAACCACCCTGTGTATGCATGACCCTGACAAGCAGGCGCCAGGACAGTCAGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370349.7
CDS GCA 72 bp ATGCATACACAGGGTGGTTCCACCTGGCGAGGGGTATaGCTCCTGACTGTCCAGGACAATGCCCCTGGCCTG +
Preference number: 6 (lower is better)
Translates to: MHTQGGSTWRGV*LLTVQDNAPGL
Trigger: CAGGCCAGGGGCATTGTCCTGGACAGTCAGGAGGCATACCCCTCGCCAGGTGGAACCACCCTGTGTATGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411611.1
CDS GCA 72 bp CCTCCTGACTGTCCTGGCGCCTGCTTGTCAGGGTCATaGATACACAGGGTGGTTCCACCTGGCGAGGGGTAT +
Preference number: 6 (lower is better)
Translates to: PPDCPGACLSGS*IHRVVPPGEGY
Trigger: ATACCCCTCGCCAGGTGGAACCACCCTGTGTATGCATGACCCTGACAAGCAGGCGCCAGGACAGTCAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411611.1
CDS CCA 72 bp ACGATGCCGGCCTCCTTCTTGTTCCAGCCGAAGTCCTaGCTCATGGAGACGGTGCAGATGGGCATGCTGGAG +
Preference number: 6 (lower is better)
Translates to: TMPASFLFQPKS*LMETVQMGMLE
Trigger: CTCCAGCATGCCCATCTGCACCGTCTCCATGAGCCAGGACTTCGGCTGGAACAAGAAGGAGGCCGGCATCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370349.7
ENST00000370351.9
ENST00000411611.1
ENST00000488738.5
CDS CCA 72 bp CTGGCGCCTGCTTGTCAGGGTCATGCATACACAGGGTaGTTCCACCTGGCGAGGGGTATGCCTCCTGACTGT +
Preference number: 6 (lower is better)
Translates to: LAPACQGHAYTG*FHLARGMPPDC
Trigger: ACAGTCAGGAGGCATACCCCTCGCCAGGTGGAACCACCCTGTGTATGCATGACCCTGACAAGCAGGCGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411611.1
CDS CCA 72 bp CAGCACCCGAGCGCTTTTCCTCACTGGCGGATTCTTTaGGAGGTCAAAGCCATCGTCTCCGGGCTCCTGCTC +
Preference number: 6 (lower is better)
Translates to: QHPSAFPHWRIL*EVKAIVSGLLL
Trigger: GAGCAGGAGCCCGGAGACGATGGCTTTGACCTCCCAAAGAATCCGCCAGTGAGGAAAAGCGCTCGGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488738.5
CDS CAA 72 bp AGACTGGCCGGAATCGCCACCAACCAAGGAACCACGTaGAAGATCCAGCCCGCAGGTGACCCCTCTGTCCAC +
Preference number: 6 (lower is better)
Translates to: RLAGIATNQGTT*KIQPAGDPSVH
Trigger: GTGGACAGAGGGGTCACCTGCGGGCTGGATCTTCAACGTGGTTCCTTGGTTGGTGGCGATTCCGGCCAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488738.5
CDS CAA 90 bp TCCTGGGTGTCTGCCTTAGCCCTAGATGGAACCTTCCAGATCGAATaGGGTGGCGGAGCCGCTGACAGCTCAGCACCCGAGCGCTTTTCC +
Preference number: 6 (lower is better)
Translates to: SWVSALALDGTFQIE*GGGAADSSAPERFS
Trigger: GGAAAAGCGCTCGGGTGCTGAGCTGTCAGCGGCTCCGCCACCCAATTCGATCTGGAAGGTTCCATCTAGGGCTAAGGCAGACACCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488738.5
CDS TCA 72 bp CAACCTGTGTCAGGCAGTAGCCCCAGAAGAAGCTGCTaGGCACGATGCCGGCCTCCTTCTTGTTCCAGCCGA +
Preference number: 6 (lower is better)
Translates to: QPVSGSSPRRSC*ARCRPPSCSSR
Trigger: TCGGCTGGAACAAGAAGGAGGCCGGCATCGTGCTCAGCAGCTTCTTCTGGGGCTACTGCCTGACACAGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370349.7
ENST00000370351.9
ENST00000411611.1
ENST00000488738.5
CDS GCA 72 bp TCTTGTTCCAGCCGAAGTCCTGGCTCATGGAGACGGTaGAGATGGGCATGCTGGAGCGGGCGCAGTACAGAA +
Preference number: 6 (lower is better)
Translates to: SCSSRSPGSWRR*RWACWSGRSTE
Trigger: TTCTGTACTGCGCCCGCTCCAGCATGCCCATCTGCACCGTCTCCATGAGCCAGGACTTCGGCTGGAACAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370349.7
ENST00000370351.9
ENST00000411611.1
ENST00000488738.5
CDS GCA 72 bp AAACTGATGGCTATCAGGGCGGGAGGCGCCACCCGTTaGCAAAGGATTGGGGATTTGGGGGTGGTTCCAGAG +
Preference number: 6 (lower is better)
Translates to: KLMAIRAGGATR*QRIGDLGVVPE
Trigger: CTCTGGAACCACCCCCAAATCCCCAATCCTTTGGCAACGGGTGGCGCCTCCCGCCCTGATAGCCATCAGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000487303.1
ENST00000488738.5
CDS CCA 72 bp CCGCTGACAGCTCAGCACCCGAGCGCTTTTCCTCACTaGCGGATTCTTTGGGAGGTCAAAGCCATCGTCTCC +
Preference number: 6 (lower is better)
Translates to: PLTAQHPSAFPH*RILWEVKAIVS
Trigger: GGAGACGATGGCTTTGACCTCCCAAAGAATCCGCCAGTGAGGAAAAGCGCTCGGGTGCTGAGCTGTCAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488738.5
CDS CCA 72 bp CAGCAGGTCTTCCTGGGTGTCTGCCTTAGCCCTAGATaGAACCTTCCAGATCGAATTGGGTGGCGGAGCCGC +
Preference number: 6 (lower is better)
Translates to: QQVFLGVCLSPR*NLPDRIGWRSR
Trigger: GCGGCTCCGCCACCCAATTCGATCTGGAAGGTTCCATCTAGGGCTAAGGCAGACACCCAGGAAGACCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488738.5
CDS CAA 72 bp CAGAAGAAGCTGCTGAGCACGATGCCGGCCTCCTTCTaGTTCCAGCCGAAGTCCTGGCTCATGGAGACGGTG +
Preference number: 6 (lower is better)
Translates to: QKKLLSTMPASF*FQPKSWLMETV
Trigger: CACCGTCTCCATGAGCCAGGACTTCGGCTGGAACAAGAAGGAGGCCGGCATCGTGCTCAGCAGCTTCTTCTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370349.7
ENST00000370351.9
ENST00000411611.1
ENST00000488738.5
CDS CAA 72 bp GTGCACAGCCCCAGGTTGCTGATGATGGCCACAAGGTaGAACAGGCAAGTCCAGGAGCCCGTGGTCTCCATC +
Preference number: 6 (lower is better)
Translates to: VHSPRLLMMATR*NRQVQEPVVSI
Trigger: GATGGAGACCACGGGCTCCTGGACTTGCCTGTTCAACCTTGTGGCCATCATCAGCAACCTGGGGCTGTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370349.7
ENST00000370351.9
ENST00000459704.6
ENST00000483113.1
ENST00000488738.5
CDS CAA 72 bp TCAGCACCCGAGCGCTTTTCCTCACTGGCGGATTCTTaGGGAGGTCAAAGCCATCGTCTCCGGGCTCCTGCT +
Preference number: 6 (lower is better)
Translates to: SAPERFSSLADS*GGQSHRLRAPA
Trigger: AGCAGGAGCCCGGAGACGATGGCTTTGACCTCCCAAAGAATCCGCCAGTGAGGAAAAGCGCTCGGGTGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488738.5
CDS CAA 72 bp TCTGCCTTAGCCCTAGATGGAACCTTCCAGATCGAATaGGGTGGCGGAGCCGCTGACAGCTCAGCACCCGAG +
Preference number: 6 (lower is better)
Translates to: SALALDGTFQIE*GGGAADSSAPE
Trigger: CTCGGGTGCTGAGCTGTCAGCGGCTCCGCCACCCAATTCGATCTGGAAGGTTCCATCTAGGGCTAAGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488738.5
CDS CAA 72 bp CAAACTGATGGCTATCAGGGCGGGAGGCGCCACCCGTaGCCAAAGGATTGGGGATTTGGGGGTGGTTCCAGA +
Preference number: 6 (lower is better)
Translates to: QTDGYQGGRRHP*PKDWGFGGGSR
Trigger: TCTGGAACCACCCCCAAATCCCCAATCCTTTGGCAACGGGTGGCGCCTCCCGCCCTGATAGCCATCAGTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000487303.1
ENST00000488738.5
CDS TCA 72 bp CTCCCCTACCAGACACCTAACAGGCAGCATCACCTTTaGGAACCGCGTTCTGAACGACCCTCCACACGGCCT +
Preference number: 6 (lower is better)
Translates to: LPYQTPNRQHHL*EPRSERPSTRP
Trigger: AGGCCGTGTGGAGGGTCGTTCAGAACGCGGTTCTCAAAGGTGATGCTGCCTGTTAGGTGTCTGGTAGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488738.5
CDS CCA 72 bp ATTTCCAGCCTCAAACACAGAAACCTGCCCCGAGCATaGACGGGGTCCTCTCCAGAGGAAGAGCCTGGCAGT +
Preference number: 6 (lower is better)
Translates to: ISSLKHRNLPRA*TGSSPEEEPGS
Trigger: ACTGCCAGGCTCTTCCTCTGGAGAGGACCCCGTCCATGCTCGGGGCAGGTTTCTGTGTTTGAGGCTGGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488738.5
CDS TCA 72 bp GCAGGTACCTGTACACGTACCACACCCAAAGCAAGGTaGGGCCGCCGGAGAAATAGAAGATGCTCTGCCAGC +
Preference number: 6 (lower is better)
Translates to: AGTCTRTTPKAR*GRRRNRRCSAS
Trigger: GCTGGCAGAGCATCTTCTATTTCTCCGGCGGCCTCACCTTGCTTTGGGTGTGGTACGTGTACAGGTACCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370349.7
ENST00000370351.9
ENST00000488738.5
CDS CCA 72 bp CTTGTCAGGGTCATGCATACACAGGGTGGTTCCACCTaGCGAGGGGTATGCCTCCTGACTGTCCAGGACAAT +
Preference number: 6 (lower is better)
Translates to: LVRVMHTQGGST*RGVCLLTVQDN
Trigger: ATTGTCCTGGACAGTCAGGAGGCATACCCCTCGCCAGGTGGAACCACCCTGTGTATGCATGACCCTGACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411611.1
CDS CAA 72 bp GCCTGTCCAAACACCAGGAAGGTGCACAGCCCCAGGTaGCTGATGATGGCCACAAGGTTGAACAGGCAAGTC +
Preference number: 6 (lower is better)
Translates to: ACPNTRKVHSPR*LMMATRLNRQV
Trigger: GACTTGCCTGTTCAACCTTGTGGCCATCATCAGCAACCTGGGGCTGTGCACCTTCCTGGTGTTTGGACAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370349.7
ENST00000370351.9
ENST00000459704.6
ENST00000483113.1
ENST00000488738.5
CDS GCA 72 bp CTGGGACCAGCCACGCATGTGTCCCAGTCGGGCGGCTaGTGTGGAACTCACATTGTTTTTCACATCTTGCTT +
Preference number: 6 (lower is better)
Translates to: LGPATHVSQSGG*CGTHIVFHILL
Trigger: AAGCAAGATGTGAAAAACAATGTGAGTTCCACAGCAGCCGCCCGACTGGGACACATGCGTGGCTGGTCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459704.6
CDS GCA 72 bp GCCTTGACCTGTGCCCAGCAGGTCTTCCTGGGTGTCTaGCTTAGCCCTAGATGGAACCTTCCAGATCGAATT +
Preference number: 6 (lower is better)
Translates to: ALTCAQQVFLGV*LSPRWNLPDRI
Trigger: AATTCGATCTGGAAGGTTCCATCTAGGGCTAAGGCAGACACCCAGGAAGACCTGCTGGGCACAGGTCAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488738.5
CDS CCA 72 bp CCAAACAGAAAGCCGGCGCAGGACGGGGCCAAGTCCTaGATGTTAACAGAAATGCCACTGTGGTTGAAGGTC +
Preference number: 6 (lower is better)
Translates to: PNRKPAQDGAKS*MLTEMPLWLKV
Trigger: GACCTTCAACCACAGTGGCATTTCTGTTAACATCCAGGACTTGGCCCCGTCCTGCGCCGGCTTTCTGTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370349.7
ENST00000370351.9
ENST00000459704.6
ENST00000483113.1
ENST00000488738.5
CDS TCA 72 bp GATGAGATCTGTACACGTACCACACCCAAAGCAAGGTaGGGCCGCCGGAGAAATAGAAGATGCTCTGCCAGC +
Preference number: 6 (lower is better)
Translates to: DEICTRTTPKAR*GRRRNRRCSAS
Trigger: GCTGGCAGAGCATCTTCTATTTCTCCGGCGGCCTCACCTTGCTTTGGGTGTGGTACGTGTACAGATCTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459704.6