RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC17A2 (Homo sapiens)

Ensembl gene IDs: ENSG00000112337

Ensembl transcript IDs: ENST00000265425.3, ENST00000360488.7, ENST00000377850.8

Found 222 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCAGAGGCGGGTAAGGGTCCTCTCTTTGGCCCAGTCTTGAAGTTCTaGTTGTCCAAACGTGAGGTAAAAGACCAGGCCAAACATGTTGAC +
Preference number: 1 (lower is better)
Translates to: SEAGKGPLFGPVLKF*LSKREVKDQAKHVD
Trigger: GTCAACATGTTTGGCCTGGTCTTTTACCTCACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGGACCCTTACCCGCCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265425.3
3UTR CCA 90 bp CGCATGCTAGAAACCTCTAAGGAGTATCTAAAAATTAGTAGTATCTaGGTTCCACCCCAGACCAATTCATTCAGAATCTCTGGAGTGGGT +
Preference number: 1 (lower is better)
Translates to: RMLETSKEYLKISSI*VPPQTNSFRISGVG
Trigger: ACCCACTCCAGAGATTCTGAATGAATTGGTCTGGGGTGGAACCCAGATACTACTAATTTTTAGATACTCCTTAGAGGTTTCTAGCATGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
3UTR GCA 90 bp CATATGGCTACAATTCCGAGCAGATCTTCTCTGCATCCAATAACCTaGCCCACCATGAAGATATTTATCAGTGATCATTTTCACATGAAT +
Preference number: 1 (lower is better)
Translates to: HMATIPSRSSLHPIT*PTMKIFISDHFHMN
Trigger: ATTCATGTGAAAATGATCACTGATAAATATCTTCATGGTGGGGCAGGTTATTGGATGCAGAGAAGATCTGCTCGGAATTGTAGCCATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
3UTR CAA 90 bp GAGGCGGGTAAGGGTCCTCTCTTTGGCCCAGTCTTGAAGTTCTGCTaGTCCAAACGTGAGGTAAAAGACCAGGCCAAACATGTTGACTGC +
Preference number: 2 (lower is better)
Translates to: EAGKGPLFGPVLKFC*SKREVKDQAKHVDC
Trigger: GCAGTCAACATGTTTGGCCTGGTCTTTTACCTCACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGGACCCTTACCCGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265425.3
3UTR-3UTR TCA 90 bp GGTAAGGGTCCTCTCTTTGGCCCAGTCTTGAAGTTCTGCTTGTCCAAACGTGAGCCAGGCCAAACATGTTaGCTGCAGCAGACAGGAAAA +
Preference number: 2 (lower is better)
Translates to: GKGPLFGPVLKFCLSKREPGQTC*LQQTGK
Trigger: TTTTCCTGTCTGCTGCAGTCAACATGTTTGGCCTGG...CTCACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGGACCCTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265425.3
3UTR-3UTR GCA 90 bp GGTAAGGGTCCTCTCTTTGGCCCAGTCTTGAAGTTCTGCTTGTCCAAACGTGAGGCCAAACATGTTGACTaGAGCAGACAGGAAAAAGAC +
Preference number: 2 (lower is better)
Translates to: GKGPLFGPVLKFCLSKREAKHVD*SRQEKD
Trigger: GTCTTTTTCCTGTCTGCTGCAGTCAACATGTTTGGC...CTCACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGGACCCTTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265425.3
3UTR-3UTR CCA 90 bp GGCTACAATTCCGAGCAGATCTTCTCTGCATCCAATAACCTGCCCCACCATGAATCAGAATCTCTGGAGTaGGTCCCAAGTATCAGTGTC +
Preference number: 2 (lower is better)
Translates to: GYNSEQIFSASNNLPHHESESLE*VPSISV
Trigger: GACACTGATACTTGGGACCCACTCCAGAGATTCTGA...TTCATGGTGGGGCAGGTTATTGGATGCAGAGAAGATCTGCTCGGAATTGTAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
3UTR-3UTR CCA 90 bp AGTAGTATCTGGGTTCCACCCCAGACCAATTCATTCAGAATCTCTGGAGTGGGTGAACTGCTGAGTCTATaGTCAGGAATATGGAGAGAA +
Preference number: 2 (lower is better)
Translates to: SSIWVPPQTNSFRISGVGELLSL*SGIWRE
Trigger: TTCTCTCCATATTCCTGACCATAGACTCAGCAGTTC...ACCCACTCCAGAGATTCTGAATGAATTGGTCTGGGGTGGAACCCAGATACTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
3UTR-3UTR CCA 90 bp CCGATCGGTGCTGAGATCTGTAACATATGGCTACAATTCCGAGCAGATCTTCTCGAACTGCTGAGTCTATaGTCAGGAATATGGAGAGAA +
Preference number: 2 (lower is better)
Translates to: PIGAEICNIWLQFRADLLELLSL*SGIWRE
Trigger: TTCTCTCCATATTCCTGACCATAGACTCAGCAGTTC...GAGAAGATCTGCTCGGAATTGTAGCCATATGTTACAGATCTCAGCACCGATCGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
3UTR-3UTR CCA 90 bp ATCGGTGCTGAGATCTGTAACATATGGCTACAATTCCGAGCAGATCTTCTCTGCTTCATTCAGAATCTCTaGAGTGGGTCCCAAGTATCA +
Preference number: 2 (lower is better)
Translates to: IGAEICNIWLQFRADLLCFIQNL*SGSQVS
Trigger: TGATACTTGGGACCCACTCCAGAGATTCTGAATGAA...GCAGAGAAGATCTGCTCGGAATTGTAGCCATATGTTACAGATCTCAGCACCGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
3UTR-3UTR GCA 90 bp TCTGTAACATATGGCTACAATTCCGAGCAGATCTTCTCTGCATCCAATAACCTGCTGCATCCAATAACCTaGCCCACCATGAAGATATTT +
Preference number: 2 (lower is better)
Translates to: SVTYGYNSEQIFSASNNLLHPIT*PTMKIF
Trigger: AAATATCTTCATGGTGGGGCAGGTTATTGGATGCAG...CAGGTTATTGGATGCAGAGAAGATCTGCTCGGAATTGTAGCCATATGTTACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
3UTR-3UTR CCA 90 bp AAATTAGTAGTATCTGGGTTCCACCCCAGACCAATTCATTCAGAATCTCTGGAGTTCATTCAGAATCTCTaGAGTGGGTCCCAAGTATCA +
Preference number: 2 (lower is better)
Translates to: KLVVSGFHPRPIHSESLEFIQNL*SGSQVS
Trigger: TGATACTTGGGACCCACTCCAGAGATTCTGAATGAA...CTCCAGAGATTCTGAATGAATTGGTCTGGGGTGGAACCCAGATACTACTAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
3UTR-3UTR CCA 90 bp ATTCCGAGCAGATCTTCTCTGCATCCAATAACCTGCCCCACCATGAAGATATTTAAAATTAGTAGTATCTaGGTTCCACCCCAGACCAAT +
Preference number: 2 (lower is better)
Translates to: IPSRSSLHPITCPTMKIFKISSI*VPPQTN
Trigger: ATTGGTCTGGGGTGGAACCCAGATACTACTAATTTT...AAATATCTTCATGGTGGGGCAGGTTATTGGATGCAGAGAAGATCTGCTCGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
3UTR-3UTR TCA 90 bp TCTGTAACATATGGCTACAATTCCGAGCAGATCTTCTCTGCATCCAATAACCTGAAAGGCCACATGAATTaGCTTTTCAAGTTTGTCCAG +
Preference number: 2 (lower is better)
Translates to: SVTYGYNSEQIFSASNNLKGHMN*LFKFVQ
Trigger: CTGGACAAACTTGAAAAGTCAATTCATGTGGCCTTT...CAGGTTATTGGATGCAGAGAAGATCTGCTCGGAATTGTAGCCATATGTTACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
3UTR-3UTR CAA 90 bp GCGGGTAAGGGTCCTCTCTTTGGCCCAGTCTTGAAGTTCTGCTTGTCCAAACGTACCAGGCCAAACATGTaGACTGCAGCAGACAGGAAA +
Preference number: 3 (lower is better)
Translates to: AGKGPLFGPVLKFCLSKRTRPNM*TAADRK
Trigger: TTTCCTGTCTGCTGCAGTCAACATGTTTGGCCTGGT...ACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGGACCCTTACCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265425.3
3UTR GCA 72 bp GGTAAGGGTCCTCTCTTTGGCCCAGTCTTGAAGTTCTaGTTGTCCAAACGTGAGGTAAAAGACCAGGCCAAA +
Preference number: 3 (lower is better)
Translates to: GKGPLFGPVLKF*LSKREVKDQAK
Trigger: TTTGGCCTGGTCTTTTACCTCACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGGACCCTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265425.3
3UTR CCA 72 bp CTGGGTTCCACCCCAGACCAATTCATTCAGAATCTCTaGAGTGGGTCCCAAGTATCAGTGTCTTATAAAGGC +
Preference number: 3 (lower is better)
Translates to: LGSTPDQFIQNL*SGSQVSVSYKG
Trigger: GCCTTTATAAGACACTGATACTTGGGACCCACTCCAGAGATTCTGAATGAATTGGTCTGGGGTGGAACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
3UTR-3UTR CAA 90 bp GCTACAATTCCGAGCAGATCTTCTCTGCATCCAATAACCTGCCCCACCATGAAGATTGACTTTTCAAGTTaGTCCAGCTGTTGTCAACCC +
Preference number: 3 (lower is better)
Translates to: ATIPSRSSLHPITCPTMKIDFSS*SSCCQP
Trigger: GGGTTGACAACAGCTGGACAAACTTGAAAAGTCAAT...CTTCATGGTGGGGCAGGTTATTGGATGCAGAGAAGATCTGCTCGGAATTGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
3UTR CCA 72 bp TTTACAGTTCCGATCGGTGCTGAGATCTGTAACATATaGCTACAATTCCGAGCAGATCTTCTCTGCATCCAA +
Preference number: 3 (lower is better)
Translates to: FTVPIGAEICNI*LQFRADLLCIQ
Trigger: TTGGATGCAGAGAAGATCTGCTCGGAATTGTAGCCATATGTTACAGATCTCAGCACCGATCGGAACTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
3UTR GCA 72 bp ACAATTCCGAGCAGATCTTCTCTGCATCCAATAACCTaGCCCACCATGAAGATATTTATCAGTGATCATTTT +
Preference number: 3 (lower is better)
Translates to: TIPSRSSLHPIT*PTMKIFISDHF
Trigger: AAAATGATCACTGATAAATATCTTCATGGTGGGGCAGGTTATTGGATGCAGAGAAGATCTGCTCGGAATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
3UTR CCA 72 bp GAAACCTCTAAGGAGTATCTAAAAATTAGTAGTATCTaGGTTCCACCCCAGACCAATTCATTCAGAATCTCT +
Preference number: 3 (lower is better)
Translates to: ETSKEYLKISSI*VPPQTNSFRIS
Trigger: AGAGATTCTGAATGAATTGGTCTGGGGTGGAACCCAGATACTACTAATTTTTAGATACTCCTTAGAGGTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp GCGGGTAAGGGTCCTCTCTTTGGCCCAGTCTTGAAGTTCTGCTTGTCCAAACGTGTCCATGCCATTCCCTaGGCCATGCCCTGGACTGTC +
Preference number: 4 (lower is better)
Translates to: AGKGPLFGPVLKFCLSKRVHAIP*AMPWTV
Trigger: GACAGTCCAGGGCATGGCCCAGGGAATGGCATGGAC...ACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGGACCCTTACCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR TCA 90 bp GTATCTGGGTTCCACCCCAGACCAATTCATTCAGAATCTCTGGAGTGGGTCCCAGGAGAACTGGGCTGTTaGGCCAGTGAGGACAGGATG +
Preference number: 4 (lower is better)
Translates to: VSGFHPRPIHSESLEWVPGELGC*ASEDRM
Trigger: CATCCTGTCCTCACTGGCTCAACAGCCCAGTTCTCC...TGGGACCCACTCCAGAGATTCTGAATGAATTGGTCTGGGGTGGAACCCAGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp GGTAAGGGTCCTCTCTTTGGCCCAGTCTTGAAGTTCTGCTTGTCCAAACGTGAGGATAGACCTTGCTGCTaGGTGGTGTTCACCATGGCG +
Preference number: 4 (lower is better)
Translates to: GKGPLFGPVLKFCLSKREDRPCC*VVFTMA
Trigger: CGCCATGGTGAACACCACTCAGCAGCAAGGTCTATC...CTCACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGGACCCTTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR TCA 90 bp GGCTACAATTCCGAGCAGATCTTCTCTGCATCCAATAACCTGCCCCACCATGAAGGGCTGTTGAGCCAGTaGGGACAGGATGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: GYNSEQIFSASNNLPHHEGLLSQ*GQDVLL
Trigger: AAGGAGCACATCCTGTCCTCACTGGCTCAACAGCCC...TTCATGGTGGGGCAGGTTATTGGATGCAGAGAAGATCTGCTCGGAATTGTAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR GCA 90 bp TTGTCCAAACGTGAGGTAAAAGACCAGGCCAAACATGTTGACTGCAGCAGACAGCCATTCCCTGGGCCATaGCCTGGACTGTCCGAACCA +
Preference number: 4 (lower is better)
Translates to: LSKREVKDQAKHVDCSRQPFPGP*PGLSEP
Trigger: TGGTTCGGACAGTCCAGGGCATGGCCCAGGGAATGG...CTGTCTGCTGCAGTCAACATGTTTGGCCTGGTCTTTTACCTCACGTTTGGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR CCA 90 bp AGGCCACATGAATTGACTTTTCAAGTTTGTCCAGCTGTTGTCAACCCCGGGCGCAATCTGGACCTTTCCTaGTGGCAGGCTTCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: RPHELTFQVCPAVVNPGRNLDLS*WQASRP
Trigger: TGGACGGGAAGCCTGCCACCAGGAAAGGTCCAGATT...GCGCCCGGGGTTGACAACAGCTGGACAAACTTGAAAAGTCAATTCATGTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp TCCAAACGTGAGGTAAAAGACCAGGCCAAACATGTTGACTGCAGCAGACAGGAACCCTGGGCCATGCCCTaGACTGTCCGAACCATGATG +
Preference number: 4 (lower is better)
Translates to: SKREVKDQAKHVDCSRQEPWAMP*TVRTMM
Trigger: CATCATGGTTCGGACAGTCCAGGGCATGGCCCAGGG...TTCCTGTCTGCTGCAGTCAACATGTTTGGCCTGGTCTTTTACCTCACGTTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR CCA 90 bp AGTAGTATCTGGGTTCCACCCCAGACCAATTCATTCAGAATCTCTGGAGTGGGTGTCCATGCCATTCCCTaGGCCATGCCCTGGACTGTC +
Preference number: 4 (lower is better)
Translates to: SSIWVPPQTNSFRISGVGVHAIP*AMPWTV
Trigger: GACAGTCCAGGGCATGGCCCAGGGAATGGCATGGAC...ACCCACTCCAGAGATTCTGAATGAATTGGTCTGGGGTGGAACCCAGATACTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp ATCTGGGTTCCACCCCAGACCAATTCATTCAGAATCTCTGGAGTGGGTCCCAAGTGGTACCACGCTTTGTaGTGGAGTTTCCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: IWVPPQTNSFRISGVGPKWYHAL*WSFPVP
Trigger: GGGCACAGGGAAACTCCACCACAAAGCGTGGTACCA...CTTGGGACCCACTCCAGAGATTCTGAATGAATTGGTCTGGGGTGGAACCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp GCGGGTAAGGGTCCTCTCTTTGGCCCAGTCTTGAAGTTCTGCTTGTCCAAACGTTGTTCACCATGGCGATaGTCGCAATGCTCAGACTCA +
Preference number: 4 (lower is better)
Translates to: AGKGPLFGPVLKFCLSKRCSPWR*SQCSDS
Trigger: TGAGTCTGAGCATTGCGATCATCGCCATGGTGAACA...ACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGGACCCTTACCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR TCA 90 bp GCGGGTAAGGGTCCTCTCTTTGGCCCAGTCTTGAAGTTCTGCTTGTCCAAACGTGCCCAAATAGTAAACTaGCCTGTCCATGCCATTCCC +
Preference number: 4 (lower is better)
Translates to: AGKGPLFGPVLKFCLSKRAQIVN*PVHAIP
Trigger: GGGAATGGCATGGACAGGTCAGTTTACTATTTGGGC...ACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGGACCCTTACCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR TCA 90 bp GGTCCTCTCTTTGGCCCAGTCTTGAAGTTCTGCTTGTCCAAACGTGAGGTAAAAGGAGAACTGGGCTGTTaGGCCAGTGAGGACAGGATG +
Preference number: 4 (lower is better)
Translates to: GPLFGPVLKFCLSKREVKGELGC*ASEDRM
Trigger: CATCCTGTCCTCACTGGCTCAACAGCCCAGTTCTCC...TTTTACCTCACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR TCA 90 bp CCCCAGACCAATTCATTCAGAATCTCTGGAGTGGGTCCCAAGTATCAGTGTCTTGGAGAACTGGGCTGTTaGGCCAGTGAGGACAGGATG +
Preference number: 4 (lower is better)
Translates to: PQTNSFRISGVGPKYQCLGELGC*ASEDRM
Trigger: CATCCTGTCCTCACTGGCTCAACAGCCCAGTTCTCC...AAGACACTGATACTTGGGACCCACTCCAGAGATTCTGAATGAATTGGTCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR GCA 90 bp GCGGGTAAGGGTCCTCTCTTTGGCCCAGTCTTGAAGTTCTGCTTGTCCAAACGTGTTATTGAAGGCATCTaGAACAGGCCCCTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: AGKGPLFGPVLKFCLSKRVIEGI*NRPLSG
Trigger: TCCACTGAGGGGCCTGTTGCAGATGCCTTCAATAAC...ACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGGACCCTTACCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR CCA 90 bp CCTCTCTTTGGCCCAGTCTTGAAGTTCTGCTTGTCCAAACGTGAGGTAAAAGACCTCGTCCAGGAGAACTaGGCTGTTGAGCCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: PLFGPVLKFCLSKREVKDLVQEN*AVEPVR
Trigger: CCTCACTGGCTCAACAGCCCAGTTCTCCTGGACGAG...GTCTTTTACCTCACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR CCA 90 bp CCCCAGACCAATTCATTCAGAATCTCTGGAGTGGGTCCCAAGTATCAGTGTCTTCTCGTCCAGGAGAACTaGGCTGTTGAGCCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: PQTNSFRISGVGPKYQCLLVQEN*AVEPVR
Trigger: CCTCACTGGCTCAACAGCCCAGTTCTCCTGGACGAG...AAGACACTGATACTTGGGACCCACTCCAGAGATTCTGAATGAATTGGTCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp ATCTGGGTTCCACCCCAGACCAATTCATTCAGAATCTCTGGAGTGGGTCCCAAGTGTTCACCATGGCGATaGTCGCAATGCTCAGACTCA +
Preference number: 4 (lower is better)
Translates to: IWVPPQTNSFRISGVGPKCSPWR*SQCSDS
Trigger: TGAGTCTGAGCATTGCGATCATCGCCATGGTGAACA...CTTGGGACCCACTCCAGAGATTCTGAATGAATTGGTCTGGGGTGGAACCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp GGTAAGGGTCCTCTCTTTGGCCCAGTCTTGAAGTTCTGCTTGTCCAAACGTGAGATCCTGCAATGGTGGTaGGCTTGCTTCGTTCAAGTG +
Preference number: 4 (lower is better)
Translates to: GKGPLFGPVLKFCLSKREILQWW*ACFVQV
Trigger: CACTTGAACGAAGCAAGCTCACCACCATTGCAGGAT...CTCACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGGACCCTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR TCA 90 bp GGTAAGGGTCCTCTCTTTGGCCCAGTCTTGAAGTTCTGCTTGTCCAAACGTGAGCTGCTTGTCCAAACGTaGGGTAAAAGACCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: GKGPLFGPVLKFCLSKRELLVQT*GKRPGQ
Trigger: TTGGCCTGGTCTTTTACCTCACGTTTGGACAAGCAG...CTCACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGGACCCTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR TCA 90 bp AGGCCACATGAATTGACTTTTCAAGTTTGTCCAGCTGTTGTCAACCCCGGGCGCCTGCTTGTCCAAACGTaGGGTAAAAGACCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: RPHELTFQVCPAVVNPGRLLVQT*GKRPGQ
Trigger: TTGGCCTGGTCTTTTACCTCACGTTTGGACAAGCAG...GCGCCCGGGGTTGACAACAGCTGGACAAACTTGAAAAGTCAATTCATGTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp GGTCCTCTCTTTGGCCCAGTCTTGAAGTTCTGCTTGTCCAAACGTGAGGTAAAAAATCTGGACCTTTCCTaGTGGCAGGCTTCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: GPLFGPVLKFCLSKREVKNLDLS*WQASRP
Trigger: TGGACGGGAAGCCTGCCACCAGGAAAGGTCCAGATT...TTTTACCTCACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGGACC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR CCA 90 bp ATTCCGAGCAGATCTTCTCTGCATCCAATAACCTGCCCCACCATGAAGATATTTCCCTGGGCCATGCCCTaGACTGTCCGAACCATGATG +
Preference number: 4 (lower is better)
Translates to: IPSRSSLHPITCPTMKIFPWAMP*TVRTMM
Trigger: CATCATGGTTCGGACAGTCCAGGGCATGGCCCAGGG...AAATATCTTCATGGTGGGGCAGGTTATTGGATGCAGAGAAGATCTGCTCGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp TCTGGGGATTATAGCTTTACAGTTCCGATCGGTGCTGAGATCTGTAACATATGGCCCTGGGCCATGCCCTaGACTGTCCGAACCATGATG +
Preference number: 4 (lower is better)
Translates to: SGDYSFTVPIGAEICNIWPWAMP*TVRTMM
Trigger: CATCATGGTTCGGACAGTCCAGGGCATGGCCCAGGG...CCATATGTTACAGATCTCAGCACCGATCGGAACTGTAAAGCTATAATCCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp TCTGGGGATTATAGCTTTACAGTTCCGATCGGTGCTGAGATCTGTAACATATGGGTCCATGCCATTCCCTaGGCCATGCCCTGGACTGTC +
Preference number: 4 (lower is better)
Translates to: SGDYSFTVPIGAEICNIWVHAIP*AMPWTV
Trigger: GACAGTCCAGGGCATGGCCCAGGGAATGGCATGGAC...CCATATGTTACAGATCTCAGCACCGATCGGAACTGTAAAGCTATAATCCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp AGGCCACATGAATTGACTTTTCAAGTTTGTCCAGCTGTTGTCAACCCCGGGCGCAGCTTCTGTGGGAAATaGTACCACGCTTTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RPHELTFQVCPAVVNPGRSFCGK*YHALWW
Trigger: CCACCACAAAGCGTGGTACCATTTCCCACAGAAGCT...GCGCCCGGGGTTGACAACAGCTGGACAAACTTGAAAAGTCAATTCATGTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp ATCTGGGTTCCACCCCAGACCAATTCATTCAGAATCTCTGGAGTGGGTCCCAAGATATGCTGGAGTTATTaGAGGCATCTGCAACAGGCC +
Preference number: 4 (lower is better)
Translates to: IWVPPQTNSFRISGVGPKICWSY*RHLQQA
Trigger: GGCCTGTTGCAGATGCCTTCAATAACTCCAGCATAT...CTTGGGACCCACTCCAGAGATTCTGAATGAATTGGTCTGGGGTGGAACCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp GGTAAGGGTCCTCTCTTTGGCCCAGTCTTGAAGTTCTGCTTGTCCAAACGTGAGGTTTCTGGGCTCCATTaGTACACAGAGGCCTTTGTA +
Preference number: 4 (lower is better)
Translates to: GKGPLFGPVLKFCLSKREVSGLH*YTEAFV
Trigger: TACAAAGGCCTCTGTGTATCAATGGAGCCCAGAAAC...CTCACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGGACCCTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR TCA 90 bp AAACGTGAGGTAAAAGACCAGGCCAAACATGTTGACTGCAGCAGACAGGAAAAAGGGCTGTTGAGCCAGTaGGGACAGGATGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: KREVKDQAKHVDCSRQEKGLLSQ*GQDVLL
Trigger: AAGGAGCACATCCTGTCCTCACTGGCTCAACAGCCC...TTTTTCCTGTCTGCTGCAGTCAACATGTTTGGCCTGGTCTTTTACCTCACGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR TCA 90 bp ATTCCGAGCAGATCTTCTCTGCATCCAATAACCTGCCCCACCATGAAGATATTTGGGCTGTTGAGCCAGTaGGGACAGGATGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: IPSRSSLHPITCPTMKIFGLLSQ*GQDVLL
Trigger: AAGGAGCACATCCTGTCCTCACTGGCTCAACAGCCC...AAATATCTTCATGGTGGGGCAGGTTATTGGATGCAGAGAAGATCTGCTCGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp GCGGGTAAGGGTCCTCTCTTTGGCCCAGTCTTGAAGTTCTGCTTGTCCAAACGTAGGAAATCTGCCAGCTaGCCTCCTAAAATTGTACAG +
Preference number: 4 (lower is better)
Translates to: AGKGPLFGPVLKFCLSKRRKSAS*PPKIVQ
Trigger: CTGTACAATTTTAGGAGGTCAGCTGGCAGATTTCCT...ACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGGACCCTTACCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR TCA 90 bp GCTACAATTCCGAGCAGATCTTCTCTGCATCCAATAACCTGCCCCACCATGAAGGAGCCCAAATCCCCTTaGGATTCCCATGAGGAAACT +
Preference number: 4 (lower is better)
Translates to: ATIPSRSSLHPITCPTMKEPKSP*DSHEET
Trigger: AGTTTCCTCATGGGAATCTCAAGGGGATTTGGGCTC...CTTCATGGTGGGGCAGGTTATTGGATGCAGAGAAGATCTGCTCGGAATTGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp ATCTGGGTTCCACCCCAGACCAATTCATTCAGAATCTCTGGAGTGGGTCCCAAGTCTTTGGCCCAGTCTTaGAGTTCTGCTTGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: IWVPPQTNSFRISGVGPKSLAQS*SSACPN
Trigger: GTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGA...CTTGGGACCCACTCCAGAGATTCTGAATGAATTGGTCTGGGGTGGAACCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp GTATCTGGGTTCCACCCCAGACCAATTCATTCAGAATCTCTGGAGTGGGTCCCACCAGACTCAAAATCCTaGCTGATGAGGAATCCAGTG +
Preference number: 4 (lower is better)
Translates to: VSGFHPRPIHSESLEWVPPDSKS*LMRNPV
Trigger: CACTGGATTCCTCATCAGTCAGGATTTTGAGTCTGG...TGGGACCCACTCCAGAGATTCTGAATGAATTGGTCTGGGGTGGAACCCAGATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR GCA 90 bp GCGGGTAAGGGTCCTCTCTTTGGCCCAGTCTTGAAGTTCTGCTTGTCCAAACGTCTCAGACTCACACGCTaGGTTATCATGGTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: AGKGPLFGPVLKFCLSKRLRLTR*VIMVKF
Trigger: AAACTTCACCATGATAACGCAGCGTGTGAGTCTGAG...ACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGGACCCTTACCCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR GCA 90 bp GGTAAGGGTCCTCTCTTTGGCCCAGTCTTGAAGTTCTGCTTGTCCAAACGTGAGTGGAGGAGCCCACTTTaGCCAAATAGTAAACTGACC +
Preference number: 4 (lower is better)
Translates to: GKGPLFGPVLKFCLSKREWRSPL*PNSKLT
Trigger: GGTCAGTTTACTATTTGGGCAAAGTGGGCTCCTCCA...CTCACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGGACCCTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR GCA 90 bp GCGGGTAAGGGTCCTCTCTTTGGCCCAGTCTTGAAGTTCTGCTTGTCCAAACGTAGTGAGGACAGGATGTaGTCCTTTTCCCTAACACTT +
Preference number: 4 (lower is better)
Translates to: AGKGPLFGPVLKFCLSKRSEDRM*SFSLTL
Trigger: AAGTGTTAGGGAAAAGGAGCACATCCTGTCCTCACT...ACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGGACCCTTACCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR GCA 90 bp GGTAAGGGTCCTCTCTTTGGCCCAGTCTTGAAGTTCTGCTTGTCCAAACGTGAGTCCCATGAGGAAACTTaGATATCTGGGGGCGATATC +
Preference number: 4 (lower is better)
Translates to: GKGPLFGPVLKFCLSKRESHEET*ISGGDI
Trigger: GATATCGCCCCCAGATATGCAAGTTTCCTCATGGGA...CTCACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGGACCCTTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR GCA 90 bp GGCTACAATTCCGAGCAGATCTTCTCTGCATCCAATAACCTGCCCCACCATGAAGGAAGAGATGATTCCTaGGATGAGCCCAAATCCCCT +
Preference number: 4 (lower is better)
Translates to: GYNSEQIFSASNNLPHHEGRDDS*DEPKSP
Trigger: AGGGGATTTGGGCTCATCGCAGGAATCATCTCTTCC...TTCATGGTGGGGCAGGTTATTGGATGCAGAGAAGATCTGCTCGGAATTGTAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp CCTCTCTTTGGCCCAGTCTTGAAGTTCTGCTTGTCCAAACGTGAGGTAAAAGACTGGTTATCACGTAACTaGAGGCCACAAAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PLFGPVLKFCLSKREVKDWLSRN*RPQRAG
Trigger: CCCTGCCCTTTGTGGCCTCCAGTTACGTGATAACCA...GTCTTTTACCTCACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR TCA 90 bp AAACGTGAGGTAAAAGACCAGGCCAAACATGTTGACTGCAGCAGACAGGAAAAAGGCCACAGCACATATTaGTGGAAGGAGGAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: KREVKDQAKHVDCSRQEKGHSTY*WKEEPK
Trigger: CTTGGGCTCCTCCTTCCATCAATATGTGCTGTGGCC...TTTTTCCTGTCTGCTGCAGTCAACATGTTTGGCCTGGTCTTTTACCTCACGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR TCA 90 bp ATTCCGAGCAGATCTTCTCTGCATCCAATAACCTGCCCCACCATGAAGATATTTGGCCACAGCACATATTaGTGGAAGGAGGAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: IPSRSSLHPITCPTMKIFGHSTY*WKEEPK
Trigger: CTTGGGCTCCTCCTTCCATCAATATGTGCTGTGGCC...AAATATCTTCATGGTGGGGCAGGTTATTGGATGCAGAGAAGATCTGCTCGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377850.8
CDS-3UTR TCA 90 bp TCCAAACGTGAGGTAAAAGACCAGGCCAAACATGTTGACTGCAGCAGACAGGAAGAGCCCAAATCCCCTTaGGATTCCCATGAGGAAACT +
Preference number: 4 (lower is better)
Translates to: SKREVKDQAKHVDCSRQEEPKSP*DSHEET
Trigger: AGTTTCCTCATGGGAATCTCAAGGGGATTTGGGCTC...TTCCTGTCTGCTGCAGTCAACATGTTTGGCCTGGTCTTTTACCTCACGTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR GCA 90 bp TATAGCTTTACAGTTCCGATCGGTGCTGAGATCTGTAACATATGGCTACAATTCCCATTCCCTGGGCCATaGCCTGGACTGTCCGAACCA +
Preference number: 4 (lower is better)
Translates to: YSFTVPIGAEICNIWLQFPFPGP*PGLSEP
Trigger: TGGTTCGGACAGTCCAGGGCATGGCCCAGGGAATGG...GAATTGTAGCCATATGTTACAGATCTCAGCACCGATCGGAACTGTAAAGCTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR GCA 90 bp TTGTCCAAACGTGAGGTAAAAGACCAGGCCAAACATGTTGACTGCAGCAGACAGGGAAGAGATGATTCCTaGGATGAGCCCAAATCCCCT +
Preference number: 4 (lower is better)
Translates to: LSKREVKDQAKHVDCSRQGRDDS*DEPKSP
Trigger: AGGGGATTTGGGCTCATCGCAGGAATCATCTCTTCC...CTGTCTGCTGCAGTCAACATGTTTGGCCTGGTCTTTTACCTCACGTTTGGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR CCA 90 bp GGCTACAATTCCGAGCAGATCTTCTCTGCATCCAATAACCTGCCCCACCATGAATGCACGGGTGATGCATaGGGTCATCATAAATCACTG +
Preference number: 4 (lower is better)
Translates to: GYNSEQIFSASNNLPHHECTGDA*GHHKSL
Trigger: CAGTGATTTATGATGACCCCATGCATCACCCGTGCA...TTCATGGTGGGGCAGGTTATTGGATGCAGAGAAGATCTGCTCGGAATTGTAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp GAAACCTCTAAGGAGTATCTAAAAATTAGTAGTATCTGGGTTCCACCCCAGACCCTCGTCCAGGAGAACTaGGCTGTTGAGCCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: ETSKEYLKISSIWVPPQTLVQEN*AVEPVR
Trigger: CCTCACTGGCTCAACAGCCCAGTTCTCCTGGACGAG...GGTCTGGGGTGGAACCCAGATACTACTAATTTTTAGATACTCCTTAGAGGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp GGTAAGGGTCCTCTCTTTGGCCCAGTCTTGAAGTTCTGCTTGTCCAAACGTGAGGGAAACTTGCATATCTaGGGGCGATATCTAAGGTGT +
Preference number: 4 (lower is better)
Translates to: GKGPLFGPVLKFCLSKREGNLHI*GRYLRC
Trigger: ACACCTTAGATATCGCCCCCAGATATGCAAGTTTCC...CTCACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGGACCCTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265425.3
3UTR CAA 72 bp AAGGGTCCTCTCTTTGGCCCAGTCTTGAAGTTCTGCTaGTCCAAACGTGAGGTAAAAGACCAGGCCAAACAT +
Preference number: 4 (lower is better)
Translates to: KGPLFGPVLKFC*SKREVKDQAKH
Trigger: ATGTTTGGCCTGGTCTTTTACCTCACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGGACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR TCA 90 bp TTGTCCAAACGTGAGGTAAAAGACCAGGCCAAACATGTTGACTGCAGCAGACAGATATGCTGGAGTTATTaGAGGCATCTGCAACAGGCC +
Preference number: 4 (lower is better)
Translates to: LSKREVKDQAKHVDCSRQICWSY*RHLQQA
Trigger: GGCCTGTTGCAGATGCCTTCAATAACTCCAGCATAT...CTGTCTGCTGCAGTCAACATGTTTGGCCTGGTCTTTTACCTCACGTTTGGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR TCA 90 bp GTGTCTTATAAAGGCTCCCCAGGGAAGACTAACACACAGCCAGAGTTAAGAACTAAAGTGGTAGGCATGTaGCCATCGCCTTTATGGGGA +
Preference number: 4 (lower is better)
Translates to: VSYKGSPGKTNTQPELRTKVVGM*PSPLWG
Trigger: TCCCCATAAAGGCGATGGTCACATGCCTACCACTTT...AGTTCTTAACTCTGGCTGTGTGTTAGTCTTCCCTGGGGAGCCTTTATAAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp TTGTCCAAACGTGAGGTAAAAGACCAGGCCAAACATGTTGACTGCAGCAGACAGCCCTTGAGATTCCCATaGGGAAACTTGCATATCTGG +
Preference number: 4 (lower is better)
Translates to: LSKREVKDQAKHVDCSRQPLRFP*GNLHIW
Trigger: CCAGATATGCAAGTTTCCTCATGGGAATCTCAAGGG...CTGTCTGCTGCAGTCAACATGTTTGGCCTGGTCTTTTACCTCACGTTTGGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR TCA 90 bp CCGATCGGTGCTGAGATCTGTAACATATGGCTACAATTCCGAGCAGATCTTCTCCCCTTGAGATTCCCATaGGGAAACTTGCATATCTGG +
Preference number: 4 (lower is better)
Translates to: PIGAEICNIWLQFRADLLPLRFP*GNLHIW
Trigger: CCAGATATGCAAGTTTCCTCATGGGAATCTCAAGGG...GAGAAGATCTGCTCGGAATTGTAGCCATATGTTACAGATCTCAGCACCGATCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377850.8
CDS-3UTR TCA 90 bp GTGCTGAGATCTGTAACATATGGCTACAATTCCGAGCAGATCTTCTCTGCATCCGAGCCCAAATCCCCTTaGGATTCCCATGAGGAAACT +
Preference number: 4 (lower is better)
Translates to: VLRSVTYGYNSEQIFSASEPKSP*DSHEET
Trigger: AGTTTCCTCATGGGAATCTCAAGGGGATTTGGGCTC...GGATGCAGAGAAGATCTGCTCGGAATTGTAGCCATATGTTACAGATCTCAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp TCCAAACGTGAGGTAAAAGACCAGGCCAAACATGTTGACTGCAGCAGACAGGAATCTTTGGCCCAGTCTTaGAGTTCTGCTTGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: SKREVKDQAKHVDCSRQESLAQS*SSACPN
Trigger: GTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGA...TTCCTGTCTGCTGCAGTCAACATGTTTGGCCTGGTCTTTTACCTCACGTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR GCA 90 bp ATCGGTGCTGAGATCTGTAACATATGGCTACAATTCCGAGCAGATCTTCTCTGCGTTATTGAAGGCATCTaGAACAGGCCCCTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: IGAEICNIWLQFRADLLCVIEGI*NRPLSG
Trigger: TCCACTGAGGGGCCTGTTGCAGATGCCTTCAATAAC...GCAGAGAAGATCTGCTCGGAATTGTAGCCATATGTTACAGATCTCAGCACCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR GCA 90 bp ATGCTAGAAACCTCTAAGGAGTATCTAAAAATTAGTAGTATCTGGGTTCCACCCCCATTCCCTGGGCCATaGCCTGGACTGTCCGAACCA +
Preference number: 4 (lower is better)
Translates to: MLETSKEYLKISSIWVPPPFPGP*PGLSEP
Trigger: TGGTTCGGACAGTCCAGGGCATGGCCCAGGGAATGG...GGGTGGAACCCAGATACTACTAATTTTTAGATACTCCTTAGAGGTTTCTAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR GCA 90 bp GGCTACAATTCCGAGCAGATCTTCTCTGCATCCAATAACCTGCCCCACCATGAAAGTGAGGACAGGATGTaGTCCTTTTCCCTAACACTT +
Preference number: 4 (lower is better)
Translates to: GYNSEQIFSASNNLPHHESEDRM*SFSLTL
Trigger: AAGTGTTAGGGAAAAGGAGCACATCCTGTCCTCACT...TTCATGGTGGGGCAGGTTATTGGATGCAGAGAAGATCTGCTCGGAATTGTAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp CAATTCATTCAGAATCTCTGGAGTGGGTCCCAAGTATCAGTGTCTTATAAAGGCAATCTGGACCTTTCCTaGTGGCAGGCTTCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: QFIQNLWSGSQVSVSYKGNLDLS*WQASRP
Trigger: TGGACGGGAAGCCTGCCACCAGGAAAGGTCCAGATT...GCCTTTATAAGACACTGATACTTGGGACCCACTCCAGAGATTCTGAATGAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp ATCGGTGCTGAGATCTGTAACATATGGCTACAATTCCGAGCAGATCTTCTCTGCGAAGTCAGCAGCCAGTaGTGTAAAGAGGGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: IGAEICNIWLQFRADLLCEVSSQ*CKEGEK
Trigger: CTTCTCACCCTCTTTACACCACTGGCTGCTGACTTC...GCAGAGAAGATCTGCTCGGAATTGTAGCCATATGTTACAGATCTCAGCACCGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp TCCAAACGTGAGGTAAAAGACCAGGCCAAACATGTTGACTGCAGCAGACAGGAATGCACGGGTGATGCATaGGGTCATCATAAATCACTG +
Preference number: 4 (lower is better)
Translates to: SKREVKDQAKHVDCSRQECTGDA*GHHKSL
Trigger: CAGTGATTTATGATGACCCCATGCATCACCCGTGCA...TTCCTGTCTGCTGCAGTCAACATGTTTGGCCTGGTCTTTTACCTCACGTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR CCA 90 bp GCTGAGATCTGTAACATATGGCTACAATTCCGAGCAGATCTTCTCTGCATCCAATGGTTATCACGTAACTaGAGGCCACAAAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: AEICNIWLQFRADLLCIQWLSRN*RPQRAG
Trigger: CCCTGCCCTTTGTGGCCTCCAGTTACGTGATAACCA...TTGGATGCAGAGAAGATCTGCTCGGAATTGTAGCCATATGTTACAGATCTCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377850.8
CDS-3UTR CCA 90 bp GGCTACAATTCCGAGCAGATCTTCTCTGCATCCAATAACCTGCCCCACCATGAAGGAAACTTGCATATCTaGGGGCGATATCTAAGGTGT +
Preference number: 4 (lower is better)
Translates to: GYNSEQIFSASNNLPHHEGNLHI*GRYLRC
Trigger: ACACCTTAGATATCGCCCCCAGATATGCAAGTTTCC...TTCATGGTGGGGCAGGTTATTGGATGCAGAGAAGATCTGCTCGGAATTGTAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377850.8
CDS-3UTR TCA 90 bp TTAATTCTGGGGATTATAGCTTTACAGTTCCGATCGGTGCTGAGATCTGTAACAGATAGACCTTGCTGCTaGGTGGTGTTCACCATGGCG +
Preference number: 4 (lower is better)
Translates to: LILGIIALQFRSVLRSVTDRPCC*VVFTMA
Trigger: CGCCATGGTGAACACCACTCAGCAGCAAGGTCTATC...TGTTACAGATCTCAGCACCGATCGGAACTGTAAAGCTATAATCCCCAGAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp GTGCTGAGATCTGTAACATATGGCTACAATTCCGAGCAGATCTTCTCTGCATCCGTTTCTGGGCTCCATTaGTACACAGAGGCCTTTGTA +
Preference number: 4 (lower is better)
Translates to: VLRSVTYGYNSEQIFSASVSGLH*YTEAFV
Trigger: TACAAAGGCCTCTGTGTATCAATGGAGCCCAGAAAC...GGATGCAGAGAAGATCTGCTCGGAATTGTAGCCATATGTTACAGATCTCAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp ATTCCGAGCAGATCTTCTCTGCATCCAATAACCTGCCCCACCATGAAGATATTTGCCCAAATAGTAAACTaGCCTGTCCATGCCATTCCC +
Preference number: 4 (lower is better)
Translates to: IPSRSSLHPITCPTMKIFAQIVN*PVHAIP
Trigger: GGGAATGGCATGGACAGGTCAGTTTACTATTTGGGC...AAATATCTTCATGGTGGGGCAGGTTATTGGATGCAGAGAAGATCTGCTCGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp AAACGTGAGGTAAAAGACCAGGCCAAACATGTTGACTGCAGCAGACAGGAAAAAAAAGTGGTAGGCATGTaGCCATCGCCTTTATGGGGA +
Preference number: 4 (lower is better)
Translates to: KREVKDQAKHVDCSRQEKKVVGM*PSPLWG
Trigger: TCCCCATAAAGGCGATGGTCACATGCCTACCACTTT...TTTTTCCTGTCTGCTGCAGTCAACATGTTTGGCCTGGTCTTTTACCTCACGTTT
47% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR TCA 90 bp CCTCTCTTTGGCCCAGTCTTGAAGTTCTGCTTGTCCAAACGTGAGGTAAAAGACCATGGAGCAGAGTACTaGTATACGTTGGTAGGTATG +
Preference number: 4 (lower is better)
Translates to: PLFGPVLKFCLSKREVKDHGAEY*YTLVGM
Trigger: CATACCTACCAACGTATATCAGTACTCTGCTCCATG...GTCTTTTACCTCACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR TCA 90 bp AAACGTGAGGTAAAAGACCAGGCCAAACATGTTGACTGCAGCAGACAGGAAAAACCAGGCCAAACATGTTaGCTGCAGCAGACAGGAAAA +
Preference number: 4 (lower is better)
Translates to: KREVKDQAKHVDCSRQEKPGQTC*LQQTGK
Trigger: TTTTCCTGTCTGCTGCAGTCAACATGTTTGGCCTGG...TTTTTCCTGTCTGCTGCAGTCAACATGTTTGGCCTGGTCTTTTACCTCACGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR TCA 90 bp GGTGCTGAGATCTGTAACATATGGCTACAATTCCGAGCAGATCTTCTCTGCATCTCTTTGGCCCAGTCTTaGAGTTCTGCTTGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: GAEICNIWLQFRADLLCISLAQS*SSACPN
Trigger: GTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGA...GATGCAGAGAAGATCTGCTCGGAATTGTAGCCATATGTTACAGATCTCAGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp TCTGTAACATATGGCTACAATTCCGAGCAGATCTTCTCTGCATCCAATAACCTGGCGTCCTTGGAGAAATaGCCATTGTCCACAGTGTCC +
Preference number: 4 (lower is better)
Translates to: SVTYGYNSEQIFSASNNLASLEK*PLSTVS
Trigger: GGACACTGTGGACAATGGTCATTTCTCCAAGGACGC...CAGGTTATTGGATGCAGAGAAGATCTGCTCGGAATTGTAGCCATATGTTACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp AAGTATCAGTGTCTTATAAAGGCTCCCCAGGGAAGACTAACACACAGCCAGAGTCCAGACTCAAAATCCTaGCTGATGAGGAATCCAGTG +
Preference number: 4 (lower is better)
Translates to: KYQCLIKAPQGRLTHSQSPDSKS*LMRNPV
Trigger: CACTGGATTCCTCATCAGTCAGGATTTTGAGTCTGG...ACTCTGGCTGTGTGTTAGTCTTCCCTGGGGAGCCTTTATAAGACACTGATACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR GCA 90 bp ATCGGTGCTGAGATCTGTAACATATGGCTACAATTCCGAGCAGATCTTCTCTGCTGGAGGAGCCCACTTTaGCCAAATAGTAAACTGACC +
Preference number: 4 (lower is better)
Translates to: IGAEICNIWLQFRADLLCWRSPL*PNSKLT
Trigger: GGTCAGTTTACTATTTGGGCAAAGTGGGCTCCTCCA...GCAGAGAAGATCTGCTCGGAATTGTAGCCATATGTTACAGATCTCAGCACCGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR GCA 90 bp TCCAAACGTGAGGTAAAAGACCAGGCCAAACATGTTGACTGCAGCAGACAGGAAGCCAAACATGTTGACTaGAGCAGACAGGAAAAAGAC +
Preference number: 4 (lower is better)
Translates to: SKREVKDQAKHVDCSRQEAKHVD*SRQEKD
Trigger: GTCTTTTTCCTGTCTGCTGCAGTCAACATGTTTGGC...TTCCTGTCTGCTGCAGTCAACATGTTTGGCCTGGTCTTTTACCTCACGTTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR GCA 90 bp TCCAAACGTGAGGTAAAAGACCAGGCCAAACATGTTGACTGCAGCAGACAGGAACCAGTCTTGAAGTTCTaGTTGTCCAAACGTGAGGTA +
Preference number: 4 (lower is better)
Translates to: SKREVKDQAKHVDCSRQEPVLKF*LSKREV
Trigger: TACCTCACGTTTGGACAAGCAGAACTTCAAGACTGG...TTCCTGTCTGCTGCAGTCAACATGTTTGGCCTGGTCTTTTACCTCACGTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR GCA 90 bp CCGATCGGTGCTGAGATCTGTAACATATGGCTACAATTCCGAGCAGATCTTCTCCCAGTCTTGAAGTTCTaGTTGTCCAAACGTGAGGTA +
Preference number: 4 (lower is better)
Translates to: PIGAEICNIWLQFRADLLPVLKF*LSKREV
Trigger: TACCTCACGTTTGGACAAGCAGAACTTCAAGACTGG...GAGAAGATCTGCTCGGAATTGTAGCCATATGTTACAGATCTCAGCACCGATCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR GCA 90 bp GTGTCTTATAAAGGCTCCCCAGGGAAGACTAACACACAGCCAGAGTTAAGAACTTGGCTTCTCAAGCCTTaGCCTAGGGTCTTCATTGAA +
Preference number: 4 (lower is better)
Translates to: VSYKGSPGKTNTQPELRTWLLKP*PRVFIE
Trigger: TTCAATGAAGACCCTAGGGCAAGGCTTGAGAAGCCA...AGTTCTTAACTCTGGCTGTGTGTTAGTCTTCCCTGGGGAGCCTTTATAAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR GCA 90 bp ACAGTTCCGATCGGTGCTGAGATCTGTAACATATGGCTACAATTCCGAGCAGATTGGCTTCTCAAGCCTTaGCCTAGGGTCTTCATTGAA +
Preference number: 4 (lower is better)
Translates to: TVPIGAEICNIWLQFRADWLLKP*PRVFIE
Trigger: TTCAATGAAGACCCTAGGGCAAGGCTTGAGAAGCCA...ATCTGCTCGGAATTGTAGCCATATGTTACAGATCTCAGCACCGATCGGAACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp TCCAAACGTGAGGTAAAAGACCAGGCCAAACATGTTGACTGCAGCAGACAGGAAGATACCCTGAGTTTCTaGGCTCCATTGATACACAGA +
Preference number: 4 (lower is better)
Translates to: SKREVKDQAKHVDCSRQEDTLSF*APLIHR
Trigger: TCTGTGTATCAATGGAGCCCAGAAACTCAGGGTATC...TTCCTGTCTGCTGCAGTCAACATGTTTGGCCTGGTCTTTTACCTCACGTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR CCA 90 bp AAACGTGAGGTAAAAGACCAGGCCAAACATGTTGACTGCAGCAGACAGGAAAAAGAAGTCAGCAGCCAGTaGTGTAAAGAGGGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: KREVKDQAKHVDCSRQEKEVSSQ*CKEGEK
Trigger: CTTCTCACCCTCTTTACACCACTGGCTGCTGACTTC...TTTTTCCTGTCTGCTGCAGTCAACATGTTTGGCCTGGTCTTTTACCTCACGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR CCA 90 bp GGTCCTCTCTTTGGCCCAGTCTTGAAGTTCTGCTTGTCCAAACGTGAGGTAAAAAAAAACCCAGGAAAATaGCCCAAAGTGGTAGGCATG +
Preference number: 4 (lower is better)
Translates to: GPLFGPVLKFCLSKREVKKNPGK*PKVVGM
Trigger: CATGCCTACCACTTTGGGCCATTTTCCTGGGTTTTT...TTTTACCTCACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGGACC
47% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR CCA 90 bp GAAACCTCTAAGGAGTATCTAAAAATTAGTAGTATCTGGGTTCCACCCCAGACCGTCCATTGGTACCAGTaGCTTCTCAAGCCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: ETSKEYLKISSIWVPPQTVHWYQ*LLKPCP
Trigger: AGGGCAAGGCTTGAGAAGCCACTGGTACCAATGGAC...GGTCTGGGGTGGAACCCAGATACTACTAATTTTTAGATACTCCTTAGAGGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp TCTGGGGATTATAGCTTTACAGTTCCGATCGGTGCTGAGATCTGTAACATATGGAGCTTCTGTGGGAAATaGTACCACGCTTTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SGDYSFTVPIGAEICNIWSFCGK*YHALWW
Trigger: CCACCACAAAGCGTGGTACCATTTCCCACAGAAGCT...CCATATGTTACAGATCTCAGCACCGATCGGAACTGTAAAGCTATAATCCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp GTGTCTTATAAAGGCTCCCCAGGGAAGACTAACACACAGCCAGAGTTAAGAACTTCAGAATCTCTGGAGTaGGTCCCAAGTATCAGTGTC +
Preference number: 4 (lower is better)
Translates to: VSYKGSPGKTNTQPELRTSESLE*VPSISV
Trigger: GACACTGATACTTGGGACCCACTCCAGAGATTCTGA...AGTTCTTAACTCTGGCTGTGTGTTAGTCTTCCCTGGGGAGCCTTTATAAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp GAAACCTCTAAGGAGTATCTAAAAATTAGTAGTATCTGGGTTCCACCCCAGACCTGTTCACCATGGCGATaGTCGCAATGCTCAGACTCA +
Preference number: 4 (lower is better)
Translates to: ETSKEYLKISSIWVPPQTCSPWR*SQCSDS
Trigger: TGAGTCTGAGCATTGCGATCATCGCCATGGTGAACA...GGTCTGGGGTGGAACCCAGATACTACTAATTTTTAGATACTCCTTAGAGGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp TCTGGGGATTATAGCTTTACAGTTCCGATCGGTGCTGAGATCTGTAACATATGGATATGCTGGAGTTATTaGAGGCATCTGCAACAGGCC +
Preference number: 4 (lower is better)
Translates to: SGDYSFTVPIGAEICNIWICWSY*RHLQQA
Trigger: GGCCTGTTGCAGATGCCTTCAATAACTCCAGCATAT...CCATATGTTACAGATCTCAGCACCGATCGGAACTGTAAAGCTATAATCCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp GCTGAGATCTGTAACATATGGCTACAATTCCGAGCAGATCTTCTCTGCATCCAAGTTTCTGGGCTCCATTaGTACACAGAGGCCTTTGTA +
Preference number: 4 (lower is better)
Translates to: AEICNIWLQFRADLLCIQVSGLH*YTEAFV
Trigger: TACAAAGGCCTCTGTGTATCAATGGAGCCCAGAAAC...TTGGATGCAGAGAAGATCTGCTCGGAATTGTAGCCATATGTTACAGATCTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp TCTGTAACATATGGCTACAATTCCGAGCAGATCTTCTCTGCATCCAATAACCTGGCCCAAATAGTAAACTaGCCTGTCCATGCCATTCCC +
Preference number: 4 (lower is better)
Translates to: SVTYGYNSEQIFSASNNLAQIVN*PVHAIP
Trigger: GGGAATGGCATGGACAGGTCAGTTTACTATTTGGGC...CAGGTTATTGGATGCAGAGAAGATCTGCTCGGAATTGTAGCCATATGTTACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp CCTCTCTTTGGCCCAGTCTTGAAGTTCTGCTTGTCCAAACGTGAGGTAAAAGACCATCATAAATCACTGTaGACCATAGGAGACAGCAGA +
Preference number: 4 (lower is better)
Translates to: PLFGPVLKFCLSKREVKDHHKSL*TIGDSR
Trigger: TCTGCTGTCTCCTATGGTTCACAGTGATTTATGATG...GTCTTTTACCTCACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR TCA 90 bp TTGTCCAAACGTGAGGTAAAAGACCAGGCCAAACATGTTGACTGCAGCAGACAGACAACCAGAAATGGCTaGAAAAACCCAGGAAAATGG +
Preference number: 4 (lower is better)
Translates to: LSKREVKDQAKHVDCSRQTTRNG*KNPGKW
Trigger: CCATTTTCCTGGGTTTTTTCAGCCATTTCTGGTTGT...CTGTCTGCTGCAGTCAACATGTTTGGCCTGGTCTTTTACCTCACGTTTGGACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR TCA 90 bp GGTGCTGAGATCTGTAACATATGGCTACAATTCCGAGCAGATCTTCTCTGCATCAGGAAATCTGCCAGCTaGCCTCCTAAAATTGTACAG +
Preference number: 4 (lower is better)
Translates to: GAEICNIWLQFRADLLCIRKSAS*PPKIVQ
Trigger: CTGTACAATTTTAGGAGGTCAGCTGGCAGATTTCCT...GATGCAGAGAAGATCTGCTCGGAATTGTAGCCATATGTTACAGATCTCAGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp TCTGTAACATATGGCTACAATTCCGAGCAGATCTTCTCTGCATCCAATAACCTGCCAGGCCAAACATGTTaGCTGCAGCAGACAGGAAAA +
Preference number: 4 (lower is better)
Translates to: SVTYGYNSEQIFSASNNLPGQTC*LQQTGK
Trigger: TTTTCCTGTCTGCTGCAGTCAACATGTTTGGCCTGG...CAGGTTATTGGATGCAGAGAAGATCTGCTCGGAATTGTAGCCATATGTTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR GCA 90 bp TTCATTCAGAATCTCTGGAGTGGGTCCCAAGTATCAGTGTCTTATAAAGGCTCCTGGAGGAGCCCACTTTaGCCAAATAGTAAACTGACC +
Preference number: 4 (lower is better)
Translates to: FIQNLWSGSQVSVSYKGSWRSPL*PNSKLT
Trigger: GGTCAGTTTACTATTTGGGCAAAGTGGGCTCCTCCA...GGAGCCTTTATAAGACACTGATACTTGGGACCCACTCCAGAGATTCTGAATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR GCA 90 bp AAATTAGTAGTATCTGGGTTCCACCCCAGACCAATTCATTCAGAATCTCTGGAGGGAAGAGATGATTCCTaGGATGAGCCCAAATCCCCT +
Preference number: 4 (lower is better)
Translates to: KLVVSGFHPRPIHSESLEGRDDS*DEPKSP
Trigger: AGGGGATTTGGGCTCATCGCAGGAATCATCTCTTCC...CTCCAGAGATTCTGAATGAATTGGTCTGGGGTGGAACCCAGATACTACTAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR GCA 90 bp GTGCTGAGATCTGTAACATATGGCTACAATTCCGAGCAGATCTTCTCTGCATCCGCCAAACATGTTGACTaGAGCAGACAGGAAAAAGAC +
Preference number: 4 (lower is better)
Translates to: VLRSVTYGYNSEQIFSASAKHVD*SRQEKD
Trigger: GTCTTTTTCCTGTCTGCTGCAGTCAACATGTTTGGC...GGATGCAGAGAAGATCTGCTCGGAATTGTAGCCATATGTTACAGATCTCAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR GCA 90 bp ATCGGTGCTGAGATCTGTAACATATGGCTACAATTCCGAGCAGATCTTCTCTGCCCAGTCTTGAAGTTCTaGTTGTCCAAACGTGAGGTA +
Preference number: 4 (lower is better)
Translates to: IGAEICNIWLQFRADLLCPVLKF*LSKREV
Trigger: TACCTCACGTTTGGACAAGCAGAACTTCAAGACTGG...GCAGAGAAGATCTGCTCGGAATTGTAGCCATATGTTACAGATCTCAGCACCGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR GCA 90 bp TTCCACCCCAGACCAATTCATTCAGAATCTCTGGAGTGGGTCCCAAGTATCAGTCTGCATCCAATAACCTaGCCCACCATGAAGATATTT +
Preference number: 4 (lower is better)
Translates to: FHPRPIHSESLEWVPSISLHPIT*PTMKIF
Trigger: AAATATCTTCATGGTGGGGCAGGTTATTGGATGCAG...ACTGATACTTGGGACCCACTCCAGAGATTCTGAATGAATTGGTCTGGGGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp AAGTATCAGTGTCTTATAAAGGCTCCCCAGGGAAGACTAACACACAGCCAGAGTAAAAACCCAGGAAAATaGCCCAAAGTGGTAGGCATG +
Preference number: 4 (lower is better)
Translates to: KYQCLIKAPQGRLTHSQSKNPGK*PKVVGM
Trigger: CATGCCTACCACTTTGGGCCATTTTCCTGGGTTTTT...ACTCTGGCTGTGTGTTAGTCTTCCCTGGGGAGCCTTTATAAGACACTGATACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp GTATCTGGGTTCCACCCCAGACCAATTCATTCAGAATCTCTGGAGTGGGTCCCATCTCTGATGTTAACATaGAGCAGAGTACTGATATAC +
Preference number: 4 (lower is better)
Translates to: VSGFHPRPIHSESLEWVPSLMLT*SRVLIY
Trigger: GTATATCAGTACTCTGCTCCATGTTAACATCAGAGA...TGGGACCCACTCCAGAGATTCTGAATGAATTGGTCTGGGGTGGAACCCAGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp GGTCCTCTCTTTGGCCCAGTCTTGAAGTTCTGCTTGTCCAAACGTGAGGTAAAAAGATGTTCAATAAACTaGCCCAACCTGACTGATGAG +
Preference number: 4 (lower is better)
Translates to: GPLFGPVLKFCLSKREVKRCSIN*PNLTDE
Trigger: CTCATCAGTCAGGTTGGGCCAGTTTATTGAACATCT...TTTTACCTCACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR CCA 90 bp CCCCAGACCAATTCATTCAGAATCTCTGGAGTGGGTCCCAAGTATCAGTGTCTTTTCATTCAGAATCTCTaGAGTGGGTCCCAAGTATCA +
Preference number: 4 (lower is better)
Translates to: PQTNSFRISGVGPKYQCLFIQNL*SGSQVS
Trigger: TGATACTTGGGACCCACTCCAGAGATTCTGAATGAA...AAGACACTGATACTTGGGACCCACTCCAGAGATTCTGAATGAATTGGTCTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp GGCTACAATTCCGAGCAGATCTTCTCTGCATCCAATAACCTGCCCCACCATGAAGAGATCTGTAACATATaGCTACAATTCCGAGCAGAT +
Preference number: 4 (lower is better)
Translates to: GYNSEQIFSASNNLPHHEEICNI*LQFRAD
Trigger: ATCTGCTCGGAATTGTAGCCATATGTTACAGATCTC...TTCATGGTGGGGCAGGTTATTGGATGCAGAGAAGATCTGCTCGGAATTGTAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp TATAGCTTTACAGTTCCGATCGGTGCTGAGATCTGTAACATATGGCTACAATTCATCCTGCAATGGTGGTaGGCTTGCTTCGTTCAAGTG +
Preference number: 4 (lower is better)
Translates to: YSFTVPIGAEICNIWLQFILQWW*ACFVQV
Trigger: CACTTGAACGAAGCAAGCTCACCACCATTGCAGGAT...GAATTGTAGCCATATGTTACAGATCTCAGCACCGATCGGAACTGTAAAGCTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp TATAGCTTTACAGTTCCGATCGGTGCTGAGATCTGTAACATATGGCTACAATTCAAAGTGGTAGGCATGTaGCCATCGCCTTTATGGGGA +
Preference number: 4 (lower is better)
Translates to: YSFTVPIGAEICNIWLQFKVVGM*PSPLWG
Trigger: TCCCCATAAAGGCGATGGTCACATGCCTACCACTTT...GAATTGTAGCCATATGTTACAGATCTCAGCACCGATCGGAACTGTAAAGCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp ATTCCGAGCAGATCTTCTCTGCATCCAATAACCTGCCCCACCATGAAGATATTTCATGGAGCAGAGTACTaGTATACGTTGGTAGGTATG +
Preference number: 4 (lower is better)
Translates to: IPSRSSLHPITCPTMKIFHGAEY*YTLVGM
Trigger: CATACCTACCAACGTATATCAGTACTCTGCTCCATG...AAATATCTTCATGGTGGGGCAGGTTATTGGATGCAGAGAAGATCTGCTCGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp TTAATTCTGGGGATTATAGCTTTACAGTTCCGATCGGTGCTGAGATCTGTAACACTGCTTGTCCAAACGTaGGGTAAAAGACCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: LILGIIALQFRSVLRSVTLLVQT*GKRPGQ
Trigger: TTGGCCTGGTCTTTTACCTCACGTTTGGACAAGCAG...TGTTACAGATCTCAGCACCGATCGGAACTGTAAAGCTATAATCCCCAGAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR GCA 90 bp TTCATTCAGAATCTCTGGAGTGGGTCCCAAGTATCAGTGTCTTATAAAGGCTCCCTCAGACTCACACGCTaGGTTATCATGGTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: FIQNLWSGSQVSVSYKGSLRLTR*VIMVKF
Trigger: AAACTTCACCATGATAACGCAGCGTGTGAGTCTGAG...GGAGCCTTTATAAGACACTGATACTTGGGACCCACTCCAGAGATTCTGAATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR GCA 90 bp ACACAGCCAGAGTTAAGAACTGCTGAGTCTATGGTCAGGAATATGGAGAGAAGTCTCAGACTCACACGCTaGGTTATCATGGTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: TQPELRTAESMVRNMERSLRLTR*VIMVKF
Trigger: AAACTTCACCATGATAACGCAGCGTGTGAGTCTGAG...ACTTCTCTCCATATTCCTGACCATAGACTCAGCAGTTCTTAACTCTGGCTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp AGTAGTATCTGGGTTCCACCCCAGACCAATTCATTCAGAATCTCTGGAGTGGGTGGCAATATTACCAGATaGAGATCCTTATGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: SSIWVPPQTNSFRISGVGGNITR*RSLCCC
Trigger: ACAGCAACATAAGGATCTCCATCTGGTAATATTGCC...ACCCACTCCAGAGATTCTGAATGAATTGGTCTGGGGTGGAACCCAGATACTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp ATGCTAGAAACCTCTAAGGAGTATCTAAAAATTAGTAGTATCTGGGTTCCACCCGTCCATTGGTACCAGTaGCTTCTCAAGCCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: MLETSKEYLKISSIWVPPVHWYQ*LLKPCP
Trigger: AGGGCAAGGCTTGAGAAGCCACTGGTACCAATGGAC...GGGTGGAACCCAGATACTACTAATTTTTAGATACTCCTTAGAGGTTTCTAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp TATAGCTTTACAGTTCCGATCGGTGCTGAGATCTGTAACATATGGCTACAATTCGTCCACAGTGTCCATTaGTACCAGTGGCTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: YSFTVPIGAEICNIWLQFVHSVH*YQWLLK
Trigger: CTTGAGAAGCCACTGGTACCAATGGACACTGTGGAC...GAATTGTAGCCATATGTTACAGATCTCAGCACCGATCGGAACTGTAAAGCTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp GAAACCTCTAAGGAGTATCTAAAAATTAGTAGTATCTGGGTTCCACCCCAGACCTCAGAATCTCTGGAGTaGGTCCCAAGTATCAGTGTC +
Preference number: 4 (lower is better)
Translates to: ETSKEYLKISSIWVPPQTSESLE*VPSISV
Trigger: GACACTGATACTTGGGACCCACTCCAGAGATTCTGA...GGTCTGGGGTGGAACCCAGATACTACTAATTTTTAGATACTCCTTAGAGGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp ACACAGCCAGAGTTAAGAACTGCTGAGTCTATGGTCAGGAATATGGAGAGAAGTCATCATAAATCACTGTaGACCATAGGAGACAGCAGA +
Preference number: 4 (lower is better)
Translates to: TQPELRTAESMVRNMERSHHKSL*TIGDSR
Trigger: TCTGCTGTCTCCTATGGTTCACAGTGATTTATGATG...ACTTCTCTCCATATTCCTGACCATAGACTCAGCAGTTCTTAACTCTGGCTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp ATTCCGAGCAGATCTTCTCTGCATCCAATAACCTGCCCCACCATGAAGATATTTACAACCAGAAATGGCTaGAAAAACCCAGGAAAATGG +
Preference number: 4 (lower is better)
Translates to: IPSRSSLHPITCPTMKIFTTRNG*KNPGKW
Trigger: CCATTTTCCTGGGTTTTTTCAGCCATTTCTGGTTGT...AAATATCTTCATGGTGGGGCAGGTTATTGGATGCAGAGAAGATCTGCTCGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp ATGCTAGAAACCTCTAAGGAGTATCTAAAAATTAGTAGTATCTGGGTTCCACCCCCAGGCCAAACATGTTaGCTGCAGCAGACAGGAAAA +
Preference number: 4 (lower is better)
Translates to: MLETSKEYLKISSIWVPPPGQTC*LQQTGK
Trigger: TTTTCCTGTCTGCTGCAGTCAACATGTTTGGCCTGG...GGGTGGAACCCAGATACTACTAATTTTTAGATACTCCTTAGAGGTTTCTAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp AAAATTCAAAGGCCACATGAATTGACTTTTCAAGTTTGTCCAGCTGTTGTCAACGCGTCCTTGGAGAAATaGCCATTGTCCACAGTGTCC +
Preference number: 4 (lower is better)
Translates to: KIQRPHELTFQVCPAVVNASLEK*PLSTVS
Trigger: GGACACTGTGGACAATGGTCATTTCTCCAAGGACGC...GTTGACAACAGCTGGACAAACTTGAAAAGTCAATTCATGTGGCCTTTGAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR GCA 90 bp AACCCCGGGCGCATGCTAGAAACCTCTAAGGAGTATCTAAAAATTAGTAGTATCGCCAAACATGTTGACTaGAGCAGACAGGAAAAAGAC +
Preference number: 4 (lower is better)
Translates to: NPGRMLETSKEYLKISSIAKHVD*SRQEKD
Trigger: GTCTTTTTCCTGTCTGCTGCAGTCAACATGTTTGGC...GATACTACTAATTTTTAGATACTCCTTAGAGGTTTCTAGCATGCGCCCGGGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR GCA 90 bp ACTAACACACAGCCAGAGTTAAGAACTGCTGAGTCTATGGTCAGGAATATGGAGCTGCATCCAATAACCTaGCCCACCATGAAGATATTT +
Preference number: 4 (lower is better)
Translates to: TNTQPELRTAESMVRNMELHPIT*PTMKIF
Trigger: AAATATCTTCATGGTGGGGCAGGTTATTGGATGCAG...CTCCATATTCCTGACCATAGACTCAGCAGTTCTTAACTCTGGCTGTGTGTTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp TATAGCTTTACAGTTCCGATCGGTGCTGAGATCTGTAACATATGGCTACAATTCTGCACGGGTGATGCATaGGGTCATCATAAATCACTG +
Preference number: 4 (lower is better)
Translates to: YSFTVPIGAEICNIWLQFCTGDA*GHHKSL
Trigger: CAGTGATTTATGATGACCCCATGCATCACCCGTGCA...GAATTGTAGCCATATGTTACAGATCTCAGCACCGATCGGAACTGTAAAGCTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp GAAACCTCTAAGGAGTATCTAAAAATTAGTAGTATCTGGGTTCCACCCCAGACCAAAAACCCAGGAAAATaGCCCAAAGTGGTAGGCATG +
Preference number: 4 (lower is better)
Translates to: ETSKEYLKISSIWVPPQTKNPGK*PKVVGM
Trigger: CATGCCTACCACTTTGGGCCATTTTCCTGGGTTTTT...GGTCTGGGGTGGAACCCAGATACTACTAATTTTTAGATACTCCTTAGAGGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp GGTCCTCTCTTTGGCCCAGTCTTGAAGTTCTGCTTGTCCAAACGTGAGGTAAAATCTCTGATGTTAACATaGAGCAGAGTACTGATATAC +
Preference number: 4 (lower is better)
Translates to: GPLFGPVLKFCLSKREVKSLMLT*SRVLIY
Trigger: GTATATCAGTACTCTGCTCCATGTTAACATCAGAGA...TTTTACCTCACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR CCA 90 bp ATTATAGCTTTACAGTTCCGATCGGTGCTGAGATCTGTAACATATGGCTACAATGTCCACAGTGTCCATTaGTACCAGTGGCTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: IIALQFRSVLRSVTYGYNVHSVH*YQWLLK
Trigger: CTTGAGAAGCCACTGGTACCAATGGACACTGTGGAC...ATTGTAGCCATATGTTACAGATCTCAGCACCGATCGGAACTGTAAAGCTATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp GCTGAGATCTGTAACATATGGCTACAATTCCGAGCAGATCTTCTCTGCATCCAATTCATTCAGAATCTCTaGAGTGGGTCCCAAGTATCA +
Preference number: 4 (lower is better)
Translates to: AEICNIWLQFRADLLCIQFIQNL*SGSQVS
Trigger: TGATACTTGGGACCCACTCCAGAGATTCTGAATGAA...TTGGATGCAGAGAAGATCTGCTCGGAATTGTAGCCATATGTTACAGATCTCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp AAAATTCAAAGGCCACATGAATTGACTTTTCAAGTTTGTCCAGCTGTTGTCAACATCCTGCAATGGTGGTaGGCTTGCTTCGTTCAAGTG +
Preference number: 4 (lower is better)
Translates to: KIQRPHELTFQVCPAVVNILQWW*ACFVQV
Trigger: CACTTGAACGAAGCAAGCTCACCACCATTGCAGGAT...GTTGACAACAGCTGGACAAACTTGAAAAGTCAATTCATGTGGCCTTTGAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp AAATTAGTAGTATCTGGGTTCCACCCCAGACCAATTCATTCAGAATCTCTGGAGCATCATAAATCACTGTaGACCATAGGAGACAGCAGA +
Preference number: 4 (lower is better)
Translates to: KLVVSGFHPRPIHSESLEHHKSL*TIGDSR
Trigger: TCTGCTGTCTCCTATGGTTCACAGTGATTTATGATG...CTCCAGAGATTCTGAATGAATTGGTCTGGGGTGGAACCCAGATACTACTAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp TTAATTCTGGGGATTATAGCTTTACAGTTCCGATCGGTGCTGAGATCTGTAACACATGGAGCAGAGTACTaGTATACGTTGGTAGGTATG +
Preference number: 4 (lower is better)
Translates to: LILGIIALQFRSVLRSVTHGAEY*YTLVGM
Trigger: CATACCTACCAACGTATATCAGTACTCTGCTCCATG...TGTTACAGATCTCAGCACCGATCGGAACTGTAAAGCTATAATCCCCAGAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp TATAGCTTTACAGTTCCGATCGGTGCTGAGATCTGTAACATATGGCTACAATTCAGGAAATCTGCCAGCTaGCCTCCTAAAATTGTACAG +
Preference number: 4 (lower is better)
Translates to: YSFTVPIGAEICNIWLQFRKSAS*PPKIVQ
Trigger: CTGTACAATTTTAGGAGGTCAGCTGGCAGATTTCCT...GAATTGTAGCCATATGTTACAGATCTCAGCACCGATCGGAACTGTAAAGCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp ACTAACACACAGCCAGAGTTAAGAACTGCTGAGTCTATGGTCAGGAATATGGAGAAAGGCCACATGAATTaGCTTTTCAAGTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: TNTQPELRTAESMVRNMEKGHMN*LFKFVQ
Trigger: CTGGACAAACTTGAAAAGTCAATTCATGTGGCCTTT...CTCCATATTCCTGACCATAGACTCAGCAGTTCTTAACTCTGGCTGTGTGTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp ATTCCGAGCAGATCTTCTCTGCATCCAATAACCTGCCCCACCATGAAGATATTTAAAGGCCACATGAATTaGCTTTTCAAGTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: IPSRSSLHPITCPTMKIFKGHMN*LFKFVQ
Trigger: CTGGACAAACTTGAAAAGTCAATTCATGTGGCCTTT...AAATATCTTCATGGTGGGGCAGGTTATTGGATGCAGAGAAGATCTGCTCGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR GCA 90 bp ATGCTAGAAACCTCTAAGGAGTATCTAAAAATTAGTAGTATCTGGGTTCCACCCTCCCATGAGGAAACTTaGATATCTGGGGGCGATATC +
Preference number: 4 (lower is better)
Translates to: MLETSKEYLKISSIWVPPSHEET*ISGGDI
Trigger: GATATCGCCCCCAGATATGCAAGTTTCCTCATGGGA...GGGTGGAACCCAGATACTACTAATTTTTAGATACTCCTTAGAGGTTTCTAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377850.8
CDS-3UTR CCA 90 bp TATAGCTTTACAGTTCCGATCGGTGCTGAGATCTGTAACATATGGCTACAATTCGATACCCTGAGTTTCTaGGCTCCATTGATACACAGA +
Preference number: 4 (lower is better)
Translates to: YSFTVPIGAEICNIWLQFDTLSF*APLIHR
Trigger: TCTGTGTATCAATGGAGCCCAGAAACTCAGGGTATC...GAATTGTAGCCATATGTTACAGATCTCAGCACCGATCGGAACTGTAAAGCTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp AAAATTCAAAGGCCACATGAATTGACTTTTCAAGTTTGTCCAGCTGTTGTCAACGAAGTCAGCAGCCAGTaGTGTAAAGAGGGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: KIQRPHELTFQVCPAVVNEVSSQ*CKEGEK
Trigger: CTTCTCACCCTCTTTACACCACTGGCTGCTGACTTC...GTTGACAACAGCTGGACAAACTTGAAAAGTCAATTCATGTGGCCTTTGAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp ATCGGTGCTGAGATCTGTAACATATGGCTACAATTCCGAGCAGATCTTCTCTGCACTATAAGGCTAACTTaGAAAAGGAGGGAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: IGAEICNIWLQFRADLLCTIRLT*KRREFS
Trigger: AGAAAACTCCCTCCTTTTCCAAGTTAGCCTTATAGT...GCAGAGAAGATCTGCTCGGAATTGTAGCCATATGTTACAGATCTCAGCACCGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR GCA 90 bp ATGCTAGAAACCTCTAAGGAGTATCTAAAAATTAGTAGTATCTGGGTTCCACCCAGTGAGGACAGGATGTaGTCCTTTTCCCTAACACTT +
Preference number: 4 (lower is better)
Translates to: MLETSKEYLKISSIWVPPSEDRM*SFSLTL
Trigger: AAGTGTTAGGGAAAAGGAGCACATCCTGTCCTCACT...GGGTGGAACCCAGATACTACTAATTTTTAGATACTCCTTAGAGGTTTCTAGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp ATTCCGAGCAGATCTTCTCTGCATCCAATAACCTGCCCCACCATGAAGATATTTTCTCTGATGTTAACATaGAGCAGAGTACTGATATAC +
Preference number: 4 (lower is better)
Translates to: IPSRSSLHPITCPTMKIFSLMLT*SRVLIY
Trigger: GTATATCAGTACTCTGCTCCATGTTAACATCAGAGA...AAATATCTTCATGGTGGGGCAGGTTATTGGATGCAGAGAAGATCTGCTCGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp TTCATTCAGAATCTCTGGAGTGGGTCCCAAGTATCAGTGTCTTATAAAGGCTCCACTATAAGGCTAACTTaGAAAAGGAGGGAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: FIQNLWSGSQVSVSYKGSTIRLT*KRREFS
Trigger: AGAAAACTCCCTCCTTTTCCAAGTTAGCCTTATAGT...GGAGCCTTTATAAGACACTGATACTTGGGACCCACTCCAGAGATTCTGAATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp GAAACCTCTAAGGAGTATCTAAAAATTAGTAGTATCTGGGTTCCACCCCAGACCGGCAATATTACCAGATaGAGATCCTTATGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: ETSKEYLKISSIWVPPQTGNITR*RSLCCC
Trigger: ACAGCAACATAAGGATCTCCATCTGGTAATATTGCC...GGTCTGGGGTGGAACCCAGATACTACTAATTTTTAGATACTCCTTAGAGGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp AACCCCGGGCGCATGCTAGAAACCTCTAAGGAGTATCTAAAAATTAGTAGTATCAAAATTAGTAGTATCTaGGTTCCACCCCAGACCAAT +
Preference number: 4 (lower is better)
Translates to: NPGRMLETSKEYLKISSIKISSI*VPPQTN
Trigger: ATTGGTCTGGGGTGGAACCCAGATACTACTAATTTT...GATACTACTAATTTTTAGATACTCCTTAGAGGTTTCTAGCATGCGCCCGGGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp ATGCTAGAAACCTCTAAGGAGTATCTAAAAATTAGTAGTATCTGGGTTCCACCCGAACTGCTGAGTCTATaGTCAGGAATATGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: MLETSKEYLKISSIWVPPELLSL*SGIWRE
Trigger: TTCTCTCCATATTCCTGACCATAGACTCAGCAGTTC...GGGTGGAACCCAGATACTACTAATTTTTAGATACTCCTTAGAGGTTTCTAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
3UTR CAA 72 bp TACTTTCCAATGAGGAAAATTCAAAGGCCACATGAATaGACTTTTCAAGTTTGTCCAGCTGTTGTCAACCCC +
Preference number: 4 (lower is better)
Translates to: YFPMRKIQRPHE*TFQVCPAVVNP
Trigger: GGGGTTGACAACAGCTGGACAAACTTGAAAAGTCAATTCATGTGGCCTTTGAATTTTCCTCATTGGAAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR TCA 90 bp ATTATAGCTTTACAGTTCCGATCGGTGCTGAGATCTGTAACATATGGCTACAATTTGCATATCAAGAGATaGAAAGAGCTTTCGCACAGT +
Preference number: 4 (lower is better)
Translates to: IIALQFRSVLRSVTYGYNLHIKR*KELSHS
Trigger: ACTGTGCGAAAGCTCTTTTCATCTCTTGATATGCAA...ATTGTAGCCATATGTTACAGATCTCAGCACCGATCGGAACTGTAAAGCTATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360488.7
CDS-3UTR CCA 90 bp AAAATTCAAAGGCCACATGAATTGACTTTTCAAGTTTGTCCAGCTGTTGTCAACGAACTGCTGAGTCTATaGTCAGGAATATGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: KIQRPHELTFQVCPAVVNELLSL*SGIWRE
Trigger: TTCTCTCCATATTCCTGACCATAGACTCAGCAGTTC...GTTGACAACAGCTGGACAAACTTGAAAAGTCAATTCATGTGGCCTTTGAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp ATGCTAGAAACCTCTAAGGAGTATCTAAAAATTAGTAGTATCTGGGTTCCACCCAAAATTAGTAGTATCTaGGTTCCACCCCAGACCAAT +
Preference number: 4 (lower is better)
Translates to: MLETSKEYLKISSIWVPPKISSI*VPPQTN
Trigger: ATTGGTCTGGGGTGGAACCCAGATACTACTAATTTT...GGGTGGAACCCAGATACTACTAATTTTTAGATACTCCTTAGAGGTTTCTAGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CCA 90 bp ATTATAGCTTTACAGTTCCGATCGGTGCTGAGATCTGTAACATATGGCTACAATGAGATCTGTAACATATaGCTACAATTCCGAGCAGAT +
Preference number: 4 (lower is better)
Translates to: IIALQFRSVLRSVTYGYNEICNI*LQFRAD
Trigger: ATCTGCTCGGAATTGTAGCCATATGTTACAGATCTC...ATTGTAGCCATATGTTACAGATCTCAGCACCGATCGGAACTGTAAAGCTATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS TCA 90 bp TCTGCAACAGGCCCCTCAGTGGAGGCATTAGATAGACCTTGCTGCTaGGTGGTGTTCACCATGGCGATGATCGCAATGCTCAGACTCACA +
Preference number: 5 (lower is better)
Translates to: SATGPSVEALDRPCC*VVFTMAMIAMLRLT
Trigger: TGTGAGTCTGAGCATTGCGATCATCGCCATGGTGAACACCACTCAGCAGCAAGGTCTATCTAATGCCTCCACTGAGGGGCCTGTTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265425.3
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CAA 90 bp ATCTGGGTTCCACCCCAGACCAATTCATTCAGAATCTCTGGAGTGGGTCCCAAGGCAATGGTGGTGAGCTaGCTTCGTTCAAGTGGAGGA +
Preference number: 5 (lower is better)
Translates to: IWVPPQTNSFRISGVGPKAMVVS*LRSSGG
Trigger: TCCTCCACTTGAACGAAGCAAGCTCACCACCATTGC...CTTGGGACCCACTCCAGAGATTCTGAATGAATTGGTCTGGGGTGGAACCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS CCA 90 bp TGTCCGAACCATGATGACCAAAATCACTCCGAAGTCAGCAGCCAGTaGTGTAAAGAGGGTGAGAAGGGAAGAGATCAGCAAACCAGCACC +
Preference number: 5 (lower is better)
Translates to: CPNHDDQNHSEVSSQ*CKEGEKGRDQQTST
Trigger: GGTGCTGGTTTGCTGATCTCTTCCCTTCTCACCCTCTTTACACCACTGGCTGCTGACTTCGGAGTGATTTTGGTCATCATGGTTCGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265425.3
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CAA 90 bp CCTCTCTTTGGCCCAGTCTTGAAGTTCTGCTTGTCCAAACGTGAGGTAAAAGACGGGCCACAGCACATATaGATGGAAGGAGGAGCCCAA +
Preference number: 5 (lower is better)
Translates to: PLFGPVLKFCLSKREVKDGPQHI*MEGGAQ
Trigger: TTGGGCTCCTCCTTCCATCAATATGTGCTGTGGCCC...GTCTTTTACCTCACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR CAA 90 bp AGGCCACATGAATTGACTTTTCAAGTTTGTCCAGCTGTTGTCAACCCCGGGCGCAAATGGTACCACGCTTaGTGGTGGAGTTTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: RPHELTFQVCPAVVNPGRKWYHA*WWSFPV
Trigger: CACAGGGAAACTCCACCACAAAGCGTGGTACCATTT...GCGCCCGGGGTTGACAACAGCTGGACAAACTTGAAAAGTCAATTCATGTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS GCA 90 bp GTGGTGTTCACCATGGCGATGATCGCAATGCTCAGACTCACACGCTaGGTTATCATGGTGAAGTTTGAGAAGTGCATGATAAGAGCCAGC +
Preference number: 5 (lower is better)
Translates to: VVFTMAMIAMLRLTR*VIMVKFEKCMIRAS
Trigger: GCTGGCTCTTATCATGCACTTCTCAAACTTCACCATGATAACGCAGCGTGTGAGTCTGAGCATTGCGATCATCGCCATGGTGAACACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265425.3
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CAA 90 bp GGTCCTCTCTTTGGCCCAGTCTTGAAGTTCTGCTTGTCCAAACGTGAGGTAAAAGCAATGGTGGTGAGCTaGCTTCGTTCAAGTGGAGGA +
Preference number: 5 (lower is better)
Translates to: GPLFGPVLKFCLSKREVKAMVVS*LRSSGG
Trigger: TCCTCCACTTGAACGAAGCAAGCTCACCACCATTGC...TTTTACCTCACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR CAA 90 bp GGTGCTGAGATCTGTAACATATGGCTACAATTCCGAGCAGATCTTCTCTGCATCGGGCCACAGCACATATaGATGGAAGGAGGAGCCCAA +
Preference number: 5 (lower is better)
Translates to: GAEICNIWLQFRADLLCIGPQHI*MEGGAQ
Trigger: TTGGGCTCCTCCTTCCATCAATATGTGCTGTGGCCC...GATGCAGAGAAGATCTGCTCGGAATTGTAGCCATATGTTACAGATCTCAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377850.8
CDS-3UTR CAA 90 bp TCCAAACGTGAGGTAAAAGACCAGGCCAAACATGTTGACTGCAGCAGACAGGAAACCAGGCCAAACATGTaGACTGCAGCAGACAGGAAA +
Preference number: 5 (lower is better)
Translates to: SKREVKDQAKHVDCSRQETRPNM*TAADRK
Trigger: TTTCCTGTCTGCTGCAGTCAACATGTTTGGCCTGGT...TTCCTGTCTGCTGCAGTCAACATGTTTGGCCTGGTCTTTTACCTCACGTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR CAA 90 bp GCGGGTAAGGGTCCTCTCTTTGGCCCAGTCTTGAAGTTCTGCTTGTCCAAACGTGTCTTGAAGTTCTGCTaGTCCAAACGTGAGGTAAAA +
Preference number: 5 (lower is better)
Translates to: AGKGPLFGPVLKFCLSKRVLKFC*SKREVK
Trigger: TTTTACCTCACGTTTGGACAAGCAGAACTTCAAGAC...ACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGGACCCTTACCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR CAA 90 bp CCCCAGACCAATTCATTCAGAATCTCTGGAGTGGGTCCCAAGTATCAGTGTCTTTGTCCACAGTGTCCATaGGTACCAGTGGCTTCTCAA +
Preference number: 5 (lower is better)
Translates to: PQTNSFRISGVGPKYQCLCPQCP*VPVASQ
Trigger: TTGAGAAGCCACTGGTACCAATGGACACTGTGGACA...AAGACACTGATACTTGGGACCCACTCCAGAGATTCTGAATGAATTGGTCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS GCA 90 bp GCTTCTGTGGGAAATGGTACCACGCTTTGTGGTGGAGTTTCCCTGTaGCCTGAATCTCTTTTACTACGACAGTCTTTTATAGCGTCCTTG +
Preference number: 5 (lower is better)
Translates to: ASVGNGTTLCGGVSL*PESLLLRQSFIASL
Trigger: CAAGGACGCTATAAAAGACTGTCGTAGTAAAAGAGATTCAGGGCACAGGGAAACTCCACCACAAAGCGTGGTACCATTTCCCACAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS CCA 90 bp GTCCTTGGAGAAATGACCATTGTCCACAGTGTCCATTGGTACCAGTaGCTTCTCAAGCCTTGCCCTAGGGTCTTCATTGAATCAGTTATC +
Preference number: 5 (lower is better)
Translates to: VLGEMTIVHSVHWYQ*LLKPCPRVFIESVI
Trigger: GATAACTGATTCAATGAAGACCCTAGGGCAAGGCTTGAGAAGCCACTGGTACCAATGGACACTGTGGACAATGGTCATTTCTCCAAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CAA 90 bp CCTCTCTTTGGCCCAGTCTTGAAGTTCTGCTTGTCCAAACGTGAGGTAAAAGACAGTTTCTGGGCTCCATaGATACACAGAGGCCTTTGT +
Preference number: 5 (lower is better)
Translates to: PLFGPVLKFCLSKREVKDSFWAP*IHRGLC
Trigger: ACAAAGGCCTCTGTGTATCAATGGAGCCCAGAAACT...GTCTTTTACCTCACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR CAA 90 bp ACATATGGCTACAATTCCGAGCAGATCTTCTCTGCATCCAATAACCTGCCCCACAGTTTCTGGGCTCCATaGATACACAGAGGCCTTTGT +
Preference number: 5 (lower is better)
Translates to: TYGYNSEQIFSASNNLPHSFWAP*IHRGLC
Trigger: ACAAAGGCCTCTGTGTATCAATGGAGCCCAGAAACT...GTGGGGCAGGTTATTGGATGCAGAGAAGATCTGCTCGGAATTGTAGCCATATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CAA 90 bp TCTGGGGATTATAGCTTTACAGTTCCGATCGGTGCTGAGATCTGTAACATATGGGCAATGGTGGTGAGCTaGCTTCGTTCAAGTGGAGGA +
Preference number: 5 (lower is better)
Translates to: SGDYSFTVPIGAEICNIWAMVVS*LRSSGG
Trigger: TCCTCCACTTGAACGAAGCAAGCTCACCACCATTGC...CCATATGTTACAGATCTCAGCACCGATCGGAACTGTAAAGCTATAATCCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CAA 90 bp ACATATGGCTACAATTCCGAGCAGATCTTCTCTGCATCCAATAACCTGCCCCACGCTGACCTCCTAAAATaGTACAGCTTGCAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: TYGYNSEQIFSASNNLPHADLLK*YSLQQQ
Trigger: TTGCTGCTGCAAGCTGTACAATTTTAGGAGGTCAGC...GTGGGGCAGGTTATTGGATGCAGAGAAGATCTGCTCGGAATTGTAGCCATATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CAA 90 bp GTGCTGAGATCTGTAACATATGGCTACAATTCCGAGCAGATCTTCTCTGCATCCACCAGGCCAAACATGTaGACTGCAGCAGACAGGAAA +
Preference number: 5 (lower is better)
Translates to: VLRSVTYGYNSEQIFSASTRPNM*TAADRK
Trigger: TTTCCTGTCTGCTGCAGTCAACATGTTTGGCCTGGT...GGATGCAGAGAAGATCTGCTCGGAATTGTAGCCATATGTTACAGATCTCAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CAA 90 bp TTGTCCAAACGTGAGGTAAAAGACCAGGCCAAACATGTTGACTGCAGCAGACAGCTCTTTGGCCCAGTCTaGAAGTTCTGCTTGTCCAAA +
Preference number: 5 (lower is better)
Translates to: LSKREVKDQAKHVDCSRQLFGPV*KFCLSK
Trigger: TTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAG...CTGTCTGCTGCAGTCAACATGTTTGGCCTGGTCTTTTACCTCACGTTTGGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR CAA 90 bp CCCCAGACCAATTCATTCAGAATCTCTGGAGTGGGTCCCAAGTATCAGTGTCTTCTCTTTGGCCCAGTCTaGAAGTTCTGCTTGTCCAAA +
Preference number: 5 (lower is better)
Translates to: PQTNSFRISGVGPKYQCLLFGPV*KFCLSK
Trigger: TTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAG...AAGACACTGATACTTGGGACCCACTCCAGAGATTCTGAATGAATTGGTCTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS TCA 90 bp TGTGGGAAATGGTACCACGCTTTGTGGTGGAGTTTCCCTGTGCCCTaGATCTCTTTTACTACGACAGTCTTTTATAGCGTCCTTGGAGAA +
Preference number: 5 (lower is better)
Translates to: CGKWYHALWWSFPVP*ISFTTTVFYSVLGE
Trigger: TTCTCCAAGGACGCTATAAAAGACTGTCGTAGTAAAAGAGATTCAGGGCACAGGGAAACTCCACCACAAAGCGTGGTACCATTTCCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CAA 90 bp TTCATTCAGAATCTCTGGAGTGGGTCCCAAGTATCAGTGTCTTATAAAGGCTCCACCAGGCCAAACATGTaGACTGCAGCAGACAGGAAA +
Preference number: 5 (lower is better)
Translates to: FIQNLWSGSQVSVSYKGSTRPNM*TAADRK
Trigger: TTTCCTGTCTGCTGCAGTCAACATGTTTGGCCTGGT...GGAGCCTTTATAAGACACTGATACTTGGGACCCACTCCAGAGATTCTGAATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CAA 90 bp ACAGTTCCGATCGGTGCTGAGATCTGTAACATATGGCTACAATTCCGAGCAGATCTCTTTGGCCCAGTCTaGAAGTTCTGCTTGTCCAAA +
Preference number: 5 (lower is better)
Translates to: TVPIGAEICNIWLQFRADLFGPV*KFCLSK
Trigger: TTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAG...ATCTGCTCGGAATTGTAGCCATATGTTACAGATCTCAGCACCGATCGGAACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS GCA 90 bp ACCATTGTCCACAGTGTCCATTGGTACCAGTGGCTTCTCAAGCCTTaGCCTAGGGTCTTCATTGAATCAGTTATCTTTTTCAGAGAGTCT +
Preference number: 5 (lower is better)
Translates to: TIVHSVHWYQWLLKP*PRVFIESVIFFRES
Trigger: AGACTCTCTGAAAAAGATAACTGATTCAATGAAGACCCTAGGGCAAGGCTTGAGAAGCCACTGGTACCAATGGACACTGTGGACAATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CAA 90 bp ATTCCGAGCAGATCTTCTCTGCATCCAATAACCTGCCCCACCATGAAGATATTTAGTTTCTGGGCTCCATaGATACACAGAGGCCTTTGT +
Preference number: 5 (lower is better)
Translates to: IPSRSSLHPITCPTMKIFSFWAP*IHRGLC
Trigger: ACAAAGGCCTCTGTGTATCAATGGAGCCCAGAAACT...AAATATCTTCATGGTGGGGCAGGTTATTGGATGCAGAGAAGATCTGCTCGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CAA 90 bp AAACGTGAGGTAAAAGACCAGGCCAAACATGTTGACTGCAGCAGACAGGAAAAAGCTGACCTCCTAAAATaGTACAGCTTGCAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: KREVKDQAKHVDCSRQEKADLLK*YSLQQQ
Trigger: TTGCTGCTGCAAGCTGTACAATTTTAGGAGGTCAGC...TTTTTCCTGTCTGCTGCAGTCAACATGTTTGGCCTGGTCTTTTACCTCACGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR CAA 90 bp ATCTGGGTTCCACCCCAGACCAATTCATTCAGAATCTCTGGAGTGGGTCCCAAGGAGAGTCTCTTCATTTaGGAATTAGGCAATATTACC +
Preference number: 5 (lower is better)
Translates to: IWVPPQTNSFRISGVGPKESLFI*ELGNIT
Trigger: GGTAATATTGCCTAATTCCAAAATGAAGAGACTCTC...CTTGGGACCCACTCCAGAGATTCTGAATGAATTGGTCTGGGGTGGAACCCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CAA 90 bp TCTGTAACATATGGCTACAATTCCGAGCAGATCTTCTCTGCATCCAATAACCTGTGTCCACAGTGTCCATaGGTACCAGTGGCTTCTCAA +
Preference number: 5 (lower is better)
Translates to: SVTYGYNSEQIFSASNNLCPQCP*VPVASQ
Trigger: TTGAGAAGCCACTGGTACCAATGGACACTGTGGACA...CAGGTTATTGGATGCAGAGAAGATCTGCTCGGAATTGTAGCCATATGTTACAGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CAA 90 bp AACCCCGGGCGCATGCTAGAAACCTCTAAGGAGTATCTAAAAATTAGTAGTATCAAATGGTACCACGCTTaGTGGTGGAGTTTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: NPGRMLETSKEYLKISSIKWYHA*WWSFPV
Trigger: CACAGGGAAACTCCACCACAAAGCGTGGTACCATTT...GATACTACTAATTTTTAGATACTCCTTAGAGGTTTCTAGCATGCGCCCGGGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CAA 90 bp TTGTCCAAACGTGAGGTAAAAGACCAGGCCAAACATGTTGACTGCAGCAGACAGCTGCTAAATATCCACTaGGGATCAGAGTCAGTATTA +
Preference number: 5 (lower is better)
Translates to: LSKREVKDQAKHVDCSRQLLNIH*GSESVL
Trigger: TAATACTGACTCTGATCCCAAGTGGATATTTAGCAG...CTGTCTGCTGCAGTCAACATGTTTGGCCTGGTCTTTTACCTCACGTTTGGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR CAA 90 bp ACATATGGCTACAATTCCGAGCAGATCTTCTCTGCATCCAATAACCTGCCCCACCTGCTAAATATCCACTaGGGATCAGAGTCAGTATTA +
Preference number: 5 (lower is better)
Translates to: TYGYNSEQIFSASNNLPHLLNIH*GSESVL
Trigger: TAATACTGACTCTGATCCCAAGTGGATATTTAGCAG...GTGGGGCAGGTTATTGGATGCAGAGAAGATCTGCTCGGAATTGTAGCCATATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CAA 90 bp ACATATGGCTACAATTCCGAGCAGATCTTCTCTGCATCCAATAACCTGCCCCACGCCCTAGGGTCTTCATaGAATCAGTTATCTTTTTCA +
Preference number: 5 (lower is better)
Translates to: TYGYNSEQIFSASNNLPHALGSS*NQLSFS
Trigger: TGAAAAAGATAACTGATTCAATGAAGACCCTAGGGC...GTGGGGCAGGTTATTGGATGCAGAGAAGATCTGCTCGGAATTGTAGCCATATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CAA 90 bp TTAATTCTGGGGATTATAGCTTTACAGTTCCGATCGGTGCTGAGATCTGTAACAGCTGACCTCCTAAAATaGTACAGCTTGCAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: LILGIIALQFRSVLRSVTADLLK*YSLQQQ
Trigger: TTGCTGCTGCAAGCTGTACAATTTTAGGAGGTCAGC...TGTTACAGATCTCAGCACCGATCGGAACTGTAAAGCTATAATCCCCAGAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CAA 90 bp AAACGTGAGGTAAAAGACCAGGCCAAACATGTTGACTGCAGCAGACAGGAAAAAGCGATATCTAAGGTGTaGATGATAAACCCTGAGTCA +
Preference number: 5 (lower is better)
Translates to: KREVKDQAKHVDCSRQEKAISKV*MINPES
Trigger: TGACTCAGGGTTTATCATCAACACCTTAGATATCGC...TTTTTCCTGTCTGCTGCAGTCAACATGTTTGGCCTGGTCTTTTACCTCACGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR CAA 90 bp GGTCCTCTCTTTGGCCCAGTCTTGAAGTTCTGCTTGTCCAAACGTGAGGTAAAATCAAAATCCTGCCACTaGAAGATGTTCAATAAACTG +
Preference number: 5 (lower is better)
Translates to: GPLFGPVLKFCLSKREVKSKSCH*KMFNKL
Trigger: CAGTTTATTGAACATCTTCAAGTGGCAGGATTTTGA...TTTTACCTCACGTTTGGACAAGCAGAACTTCAAGACTGGGCCAAAGAGAGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS-3UTR CAA 90 bp ATTCCGAGCAGATCTTCTCTGCATCCAATAACCTGCCCCACCATGAAGATATTTGTCTTGAAGTTCTGCTaGTCCAAACGTGAGGTAAAA +
Preference number: 5 (lower is better)
Translates to: IPSRSSLHPITCPTMKIFVLKFC*SKREVK
Trigger: TTTTACCTCACGTTTGGACAAGCAGAACTTCAAGAC...AAATATCTTCATGGTGGGGCAGGTTATTGGATGCAGAGAAGATCTGCTCGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CAA 90 bp TTCATTCAGAATCTCTGGAGTGGGTCCCAAGTATCAGTGTCTTATAAAGGCTCCGTCTTGAAGTTCTGCTaGTCCAAACGTGAGGTAAAA +
Preference number: 5 (lower is better)
Translates to: FIQNLWSGSQVSVSYKGSVLKFC*SKREVK
Trigger: TTTTACCTCACGTTTGGACAAGCAGAACTTCAAGAC...GGAGCCTTTATAAGACACTGATACTTGGGACCCACTCCAGAGATTCTGAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CAA 90 bp GGTGCTGAGATCTGTAACATATGGCTACAATTCCGAGCAGATCTTCTCTGCATCGCCCTAGGGTCTTCATaGAATCAGTTATCTTTTTCA +
Preference number: 5 (lower is better)
Translates to: GAEICNIWLQFRADLLCIALGSS*NQLSFS
Trigger: TGAAAAAGATAACTGATTCAATGAAGACCCTAGGGC...GATGCAGAGAAGATCTGCTCGGAATTGTAGCCATATGTTACAGATCTCAGCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CAA 90 bp GAAACCTCTAAGGAGTATCTAAAAATTAGTAGTATCTGGGTTCCACCCCAGACCGCGATATCTAAGGTGTaGATGATAAACCCTGAGTCA +
Preference number: 5 (lower is better)
Translates to: ETSKEYLKISSIWVPPQTAISKV*MINPES
Trigger: TGACTCAGGGTTTATCATCAACACCTTAGATATCGC...GGTCTGGGGTGGAACCCAGATACTACTAATTTTTAGATACTCCTTAGAGGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377850.8
CDS-3UTR CAA 90 bp ACACAGCCAGAGTTAAGAACTGCTGAGTCTATGGTCAGGAATATGGAGAGAAGTGAGAGTCTCTTCATTTaGGAATTAGGCAATATTACC +
Preference number: 5 (lower is better)
Translates to: TQPELRTAESMVRNMERSESLFI*ELGNIT
Trigger: GGTAATATTGCCTAATTCCAAAATGAAGAGACTCTC...ACTTCTCTCCATATTCCTGACCATAGACTCAGCAGTTCTTAACTCTGGCTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CAA 90 bp ATGCTAGAAACCTCTAAGGAGTATCTAAAAATTAGTAGTATCTGGGTTCCACCCATTGACTTTTCAAGTTaGTCCAGCTGTTGTCAACCC +
Preference number: 5 (lower is better)
Translates to: MLETSKEYLKISSIWVPPIDFSS*SSCCQP
Trigger: GGGTTGACAACAGCTGGACAAACTTGAAAAGTCAAT...GGGTGGAACCCAGATACTACTAATTTTTAGATACTCCTTAGAGGTTTCTAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS-3UTR CAA 90 bp AAAATTCAAAGGCCACATGAATTGACTTTTCAAGTTTGTCCAGCTGTTGTCAACATTGACTTTTCAAGTTaGTCCAGCTGTTGTCAACCC +
Preference number: 5 (lower is better)
Translates to: KIQRPHELTFQVCPAVVNIDFSS*SSCCQP
Trigger: GGGTTGACAACAGCTGGACAAACTTGAAAAGTCAAT...GTTGACAACAGCTGGACAAACTTGAAAAGTCAATTCATGTGGCCTTTGAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS TCA 72 bp GGCCCCTCAGTGGAGGCATTAGATAGACCTTGCTGCTaGGTGGTGTTCACCATGGCGATGATCGCAATGCTC +
Preference number: 6 (lower is better)
Translates to: GPSVEALDRPCC*VVFTMAMIAML
Trigger: GAGCATTGCGATCATCGCCATGGTGAACACCACTCAGCAGCAAGGTCTATCTAATGCCTCCACTGAGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265425.3
ENST00000360488.7
ENST00000377850.8
CDS CCA 72 bp TGGCAGGCTTCCCGTCCATTTAGCTTCTGTGGGAAATaGTACCACGCTTTGTGGTGGAGTTTCCCTGTGCCC +
Preference number: 6 (lower is better)
Translates to: WQASRPFSFCGK*YHALWWSFPVP
Trigger: GGGCACAGGGAAACTCCACCACAAAGCGTGGTACCATTTCCCACAGAAGCTAAATGGACGGGAAGCCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS CCA 72 bp GTCCTTGGAGAAATGACCATTGTCCACAGTGTCCATTaGTACCAGTGGCTTCTCAAGCCTTGCCCTAGGGTC +
Preference number: 6 (lower is better)
Translates to: VLGEMTIVHSVH*YQWLLKPCPRV
Trigger: GACCCTAGGGCAAGGCTTGAGAAGCCACTGGTACCAATGGACACTGTGGACAATGGTCATTTCTCCAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS TCA 72 bp ATAGACCTTGCTGCTGAGTGGTGTTCACCATGGCGATaGTCGCAATGCTCAGACTCACACGCTGCGTTATCA +
Preference number: 6 (lower is better)
Translates to: IDLAAEWCSPWR*SQCSDSHAALS
Trigger: TGATAACGCAGCGTGTGAGTCTGAGCATTGCGATCATCGCCATGGTGAACACCACTCAGCAGCAAGGTCTAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265425.3
ENST00000360488.7
ENST00000377850.8
CDS TCA 72 bp GGAAGAGATGATTCCTGCGATGAGCCCAAATCCCCTTaGGATTCCCATGAGGAAACTTGCATATCTGGGGGC +
Preference number: 6 (lower is better)
Translates to: GRDDSCDEPKSP*DSHEETCISGG
Trigger: GCCCCCAGATATGCAAGTTTCCTCATGGGAATCTCAAGGGGATTTGGGCTCATCGCAGGAATCATCTCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265425.3
ENST00000377850.8
CDS GCA 72 bp GGTGAGCTTGCTTCGTTCAAGTGGAGGAGCCCACTTTaGCCAAATAGTAAACTGACCTGTCCATGCCATTCC +
Preference number: 6 (lower is better)
Translates to: GELASFKWRSPL*PNSKLTCPCHS
Trigger: GGAATGGCATGGACAGGTCAGTTTACTATTTGGGCAAAGTGGGCTCCTCCACTTGAACGAAGCAAGCTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265425.3
ENST00000360488.7
ENST00000377850.8
CDS CCA 72 bp GAAATGACCATTGTCCACAGTGTCCATTGGTACCAGTaGCTTCTCAAGCCTTGCCCTAGGGTCTTCATTGAA +
Preference number: 6 (lower is better)
Translates to: EMTIVHSVHWYQ*LLKPCPRVFIE
Trigger: TTCAATGAAGACCCTAGGGCAAGGCTTGAGAAGCCACTGGTACCAATGGACACTGTGGACAATGGTCATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS TCA 72 bp TGGTACCACGCTTTGTGGTGGAGTTTCCCTGTGCCCTaGATCTCTTTTACTACGACAGTCTTTTATAGCGTC +
Preference number: 6 (lower is better)
Translates to: WYHALWWSFPVP*ISFTTTVFYSV
Trigger: GACGCTATAAAAGACTGTCGTAGTAAAAGAGATTCAGGGCACAGGGAAACTCCACCACAAAGCGTGGTACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS CAA 90 bp ACAGAGGCCTTTGTATCAAATTCCTTGATGGATATGCTGGAGTTATaGAAGGCATCTGCAACAGGCCCCTCAGTGGAGGCATTAGATAGA +
Preference number: 6 (lower is better)
Translates to: TEAFVSNSLMDMLEL*KASATGPSVEALDR
Trigger: TCTATCTAATGCCTCCACTGAGGGGCCTGTTGCAGATGCCTTCAATAACTCCAGCATATCCATCAAGGAATTTGATACAAAGGCCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265425.3
ENST00000360488.7
ENST00000377850.8
CDS TCA 72 bp TTACTACGACAGTCTTTTATAGCGTCCTTGGAGAAATaGCCATTGTCCACAGTGTCCATTGGTACCAGTGGC +
Preference number: 6 (lower is better)
Translates to: LLRQSFIASLEK*PLSTVSIGTSG
Trigger: GCCACTGGTACCAATGGACACTGTGGACAATGGTCATTTCTCCAAGGACGCTATAAAAGACTGTCGTAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS GCA 72 bp CACAGTGTCCATTGGTACCAGTGGCTTCTCAAGCCTTaGCCTAGGGTCTTCATTGAATCAGTTATCTTTTTC +
Preference number: 6 (lower is better)
Translates to: HSVHWYQWLLKP*PRVFIESVIFF
Trigger: GAAAAAGATAACTGATTCAATGAAGACCCTAGGGCAAGGCTTGAGAAGCCACTGGTACCAATGGACACTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS TCA 72 bp AGACATTCCTCCAACCAGACTCAAAATCCTGCCACTTaGAGATGTTCAATAAACTGGCCCAACCTGACTGAT +
Preference number: 6 (lower is better)
Translates to: RHSSNQTQNPAT*RCSINWPNLTD
Trigger: ATCAGTCAGGTTGGGCCAGTTTATTGAACATCTTCAAGTGGCAGGATTTTGAGTCTGGTTGGAGGAATGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265425.3
CDS GCA 72 bp GGAAATGGTACCACGCTTTGTGGTGGAGTTTCCCTGTaGCCTGAATCTCTTTTACTACGACAGTCTTTTATA +
Preference number: 6 (lower is better)
Translates to: GNGTTLCGGVSL*PESLLLRQSFI
Trigger: TATAAAAGACTGTCGTAGTAAAAGAGATTCAGGGCACAGGGAAACTCCACCACAAAGCGTGGTACCATTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS CAA 72 bp AGGAAACTTGCATATCTGGGGGCGATATCTAAGGTGTaGATGATAAACCCTGAGTCACATAGGTTACTGGTC +
Preference number: 6 (lower is better)
Translates to: RKLAYLGAISKV*MINPESHRLLV
Trigger: GACCAGTAACCTATGTGACTCAGGGTTTATCATCAACACCTTAGATATCGCCCCCAGATATGCAAGTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265425.3
ENST00000377850.8
CDS CAA 72 bp ACCAGTGGCTTCTCAAGCCTTGCCCTAGGGTCTTCATaGAATCAGTTATCTTTTTCAGAGAGTCTCTTCATT +
Preference number: 6 (lower is better)
Translates to: TSGFSSLALGSS*NQLSFSESLFI
Trigger: AATGAAGAGACTCTCTGAAAAAGATAACTGATTCAATGAAGACCCTAGGGCAAGGCTTGAGAAGCCACTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8
CDS CAA 90 bp TCCATTGGTACCAGTGGCTTCTCAAGCCTTGCCCTAGGGTCTTCATaGAATCAGTTATCTTTTTCAGAGAGTCTCTTCATTTTGGAATTA +
Preference number: 6 (lower is better)
Translates to: SIGTSGFSSLALGSS*NQLSFSESLFILEL
Trigger: TAATTCCAAAATGAAGAGACTCTCTGAAAAAGATAACTGATTCAATGAAGACCCTAGGGCAAGGCTTGAGAAGCCACTGGTACCAATGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360488.7
ENST00000377850.8