RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC16A7 (Homo sapiens)

Ensembl gene IDs: ENSG00000118596

Ensembl transcript IDs: ENST00000261187.8, ENST00000546459.5, ENST00000547379.6, ENST00000547801.1, ENST00000548444.1, ENST00000548610.5, ENST00000549033.5, ENST00000549305.1, ENST00000549465.5, ENST00000549588.5, ENST00000549928.5, ENST00000550062.5, ENST00000551877.5, ENST00000552024.5, ENST00000552405.5, ENST00000552432.5

Found 623 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGCAAGAGGAGGGCCAAGAAGAACTGGGCCACACTCCACAATTGTaGCAAGTCCGACGGCACTGGAAAATCTTGGTGCACCCACGAGGT +
Preference number: 1 (lower is better)
Translates to: LQEEGQEELGHTPQL*QVRRHWKILVHPRG
Trigger: ACCTCGTGGGTGCACCAAGATTTTCCAGTGCCGTCGGACTTGTCACAATTGTGGAGTGTGGCCCAGTTCTTCTTGGCCCTCCTCTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR CCA 90 bp GCCACACTCCACAATTGTGACAAGTCCGACGGCACTGGAAAATCTTaGTGCACCCACGAGGTCCATGAGAGTTTCAAAGAGAACACTGCT +
Preference number: 1 (lower is better)
Translates to: ATLHNCDKSDGTGKS*CTHEVHESFKENTA
Trigger: AGCAGTGTTCTCTTTGAAACTCTCATGGACCTCGTGGGTGCACCAAGATTTTCCAGTGCCGTCGGACTTGTCACAATTGTGGAGTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR TCA 90 bp GTAAATGCACTCACTGCAACTACTGAGGCCTGCCTCCTGTCAGAATaGCAATGCAGTCTTAGCATACGGGTGTCGGTTTGGCTGAATCTA +
Preference number: 1 (lower is better)
Translates to: VNALTATTEACLLSE*QCSLSIRVSVWLNL
Trigger: TAGATTCAGCCAAACCGACACCCGTATGCTAAGACTGCATTGTCATTCTGACAGGAGGCAGGCCTCAGTAGTTGCAGTGAGTGCATTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR GCA 90 bp CAAAGGCAGCAGGAAGTCTCATCAGTAGAGGGCAGAATTTTCAAGTaGTGCCATTCTTATCCCAGGAGGCATTTCCAGTGGTTGAGCACA +
Preference number: 1 (lower is better)
Translates to: QRQQEVSSVEGRIFK*CHSYPRRHFQWLST
Trigger: TGTGCTCAACCACTGGAAATGCCTCCTGGGATAAGAATGGCAGCACTTGAAAATTCTGCCCTCTACTGATGAGACTTCCTGCTGCCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR GCA 90 bp TTCCAAGACAGCATAATAAGCCTCCTGCTATCACCACCGGCCGGCTaGCGTATTTATTCACCAAAACACTACTTACAGGACCTAGGCATG +
Preference number: 1 (lower is better)
Translates to: FQDSIISLLLSPPAG*RIYSPKHYLQDLGM
Trigger: CATGCCTAGGTCCTGTAAGTAGTGTTTTGGTGAATAAATACGGCAGCCGGCCGGTGGTGATAGCAGGAGGCTTATTATGCTGTCTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549928.5
3UTR GCA 90 bp TTCCAAGACAGCATAATAAGCCTCCTGCTATCACCACCGGCCGGCTaGCGTATTTATTCACCAAAACACTACTTACAGGACTTCACTGAA +
Preference number: 1 (lower is better)
Translates to: FQDSIISLLLSPPAG*RIYSPKHYLQDFTE
Trigger: TTCAGTGAAGTCCTGTAAGTAGTGTTTTGGTGAATAAATACGGCAGCCGGCCGGTGGTGATAGCAGGAGGCTTATTATGCTGTCTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549033.5
3UTR CCA 90 bp AGAATTTTCAAGTGCTGCCATTCTTATCCCAGGAGGCATTTCCAGTaGTTGAGCACAAGGCCTGTTTGTAGTTTGCTTTTGCTCTTGCAT +
Preference number: 1 (lower is better)
Translates to: RIFKCCHSYPRRHFQ*LSTRPVCSLLLLLH
Trigger: ATGCAAGAGCAAAAGCAAACTACAAACAGGCCTTGTGCTCAACCACTGGAAATGCCTCCTGGGATAAGAATGGCAGCACTTGAAAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR GCA 90 bp AAGCAATCTATAGTTGATAGCATTGCCAATGAGCAGCCACACGCTTaGTGCTACCACAATAGCCCCACAGGACATGTACATGTATTTATA +
Preference number: 1 (lower is better)
Translates to: KQSIVDSIANEQPHA*CYHNSPTGHVHVFI
Trigger: TATAAATACATGTACATGTCCTGTGGGGCTATTGTGGTAGCAGCAAGCGTGTGGCTGCTCATTGGCAATGCTATCAACTATAGATTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR TCA 90 bp TTGTTGCAGAGGCAGAAGCCAAATATATCTCCTCCTCCATTTATGTaGCTATATAGTAATGAAAATCCTAGGTTGATACACTTTTCTCAA +
Preference number: 1 (lower is better)
Translates to: LLQRQKPNISPPPFM*LYSNENPRLIHFSQ
Trigger: TTGAGAAAAGTGTATCAACCTAGGATTTTCATTACTATATAGTCACATAAATGGAGGAGGAGATATATTTGGCTTCTGCCTCTGCAACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR TCA 90 bp CATAATGTGGGAATAGAGATTAGTGGGGATTGTAGTGGTATACCCTaGCTTTGCTTCATGATATCTCAAATGTTTAAAACCTATTATTCC +
Preference number: 1 (lower is better)
Translates to: HNVGIEISGDCSGIP*LCFMISQMFKTYYS
Trigger: GGAATAATAGGTTTTAAACATTTGAGATATCATGAAGCAAAGTCAGGGTATACCACTACAATCCCCACTAATCTCTATTCCCACATTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR-3UTR TCA 90 bp ATAGCATTGCCAATGAGCAGCCACACGCTTGCTGCTACCACAATAGCCCCACAGAGGCGGGTTGCAGGTTaGAGGCTAAACCTAAACCTG +
Preference number: 2 (lower is better)
Translates to: IALPMSSHTLAATTIAPQRRVAG*RLNLNL
Trigger: CAGGTTTAGGTTTAGCCTTCAACCTGCAACCCGCCT...CTGTGGGGCTATTGTGGTAGCAGCAAGCGTGTGGCTGCTCATTGGCAATGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR-3UTR CCA 90 bp CCGACGGCACTGGAAAATCTTGGTGCACCCACGAGGTCCATGAGAGTTTCAAAGCAGGACTTCCTGCCATaGCCAATCCATTTGCCATGG +
Preference number: 2 (lower is better)
Translates to: PTALENLGAPTRSMRVSKQDFLP*PIHLPW
Trigger: CCATGGCAAATGGATTGGCCATGGCAGGAAGTCCTG...CTTTGAAACTCTCATGGACCTCGTGGGTGCACCAAGATTTTCCAGTGCCGTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR-3UTR TCA 90 bp GGTCTCATGAGGGAACCAGCCACACAGGCATTCAAAAGTAGACTTCCCAAAATCAGGCGGGTTGCAGGTTaGAGGCTAAACCTAAACCTG +
Preference number: 2 (lower is better)
Translates to: GLMREPATQAFKSRLPKIRRVAG*RLNLNL
Trigger: CAGGTTTAGGTTTAGCCTTCAACCTGCAACCCGCCT...GATTTTGGGAAGTCTACTTTTGAATGCCTGTGTGGCTGGTTCCCTCATGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR-3UTR GCA 90 bp CAATTTACCTGCAAGAGGAGGGCCAAGAAGAACTGGGCCACACTCCACAATTGTTCACCACCGGCCGGCTaGCGTATTTATTCACCAAAA +
Preference number: 2 (lower is better)
Translates to: QFTCKRRAKKNWATLHNCSPPAG*RIYSPK
Trigger: TTTTGGTGAATAAATACGGCAGCCGGCCGGTGGTGA...ACAATTGTGGAGTGTGGCCCAGTTCTTCTTGGCCCTCCTCTTGCAGGTAAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR-3UTR GCA 90 bp TCTATAGTTGATAGCATTGCCAATGAGCAGCCACACGCTTGCTGCTACCACAATGCTTGTGTAGTCCTGTaGCAGTGGGCACAAGAGGTG +
Preference number: 2 (lower is better)
Translates to: SIVDSIANEQPHACCYHNACVVL*QWAQEV
Trigger: CACCTCTTGTGCCCACTGGCACAGGACTACACAAGC...ATTGTGGTAGCAGCAAGCGTGTGGCTGCTCATTGGCAATGCTATCAACTATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR CAA 90 bp CCCAGGAGGCATTTCCAGTGGTTGAGCACAAGGCCTGTTTGTAGTTaGCTTTTGCTCTTGCATTTTGTGGAAGGGAAGGAACTGAGAGAG +
Preference number: 2 (lower is better)
Translates to: PRRHFQWLSTRPVCS*LLLLHFVEGKELRE
Trigger: CTCTCTCAGTTCCTTCCCTTCCACAAAATGCAAGAGCAAAAGCAAACTACAAACAGGCCTTGTGCTCAACCACTGGAAATGCCTCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR-3UTR TCA 90 bp TGCAAGCAATCTATAGTTGATAGCATTGCCAATGAGCAGCCACACGCTTGCTGCCACCCACGAGGTCCATaGGAGTTTCAAAGAGAACAC +
Preference number: 2 (lower is better)
Translates to: CKQSIVDSIANEQPHACCHPRGP*EFQREH
Trigger: GTGTTCTCTTTGAAACTCTCATGGACCTCGTGGGTG...GCAGCAAGCGTGTGGCTGCTCATTGGCAATGCTATCAACTATAGATTGCTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR-3UTR CCA 90 bp CTTTGCAAGCAATCTATAGTTGATAGCATTGCCAATGAGCAGCCACACGCTTGCGGCACTGGAAAATCTTaGTGCACCCACGAGGTCCAT +
Preference number: 2 (lower is better)
Translates to: LCKQSIVDSIANEQPHACGTGKS*CTHEVH
Trigger: ATGGACCTCGTGGGTGCACCAAGATTTTCCAGTGCC...GCAAGCGTGTGGCTGCTCATTGGCAATGCTATCAACTATAGATTGCTTGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR-3UTR TCA 90 bp ATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCACCTAGCATTAGGGTGATGTCACTGCATTaGTGGAGACAGAATAATACA +
Preference number: 2 (lower is better)
Translates to: IHVPCWCAAPTNSSPSIRVMSLH*WRQNNT
Trigger: TGTATTATTCTGTCTCCATCAATGCAGTGACATCAC...CCTAATGCTAGGTGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR-3UTR TCA 90 bp TCTATAGTTGATAGCATTGCCAATGAGCAGCCACACGCTTGCTGCTACCACAATGACTTAGAAGTGGTTTaGTTGGGTCCAAGGGGTCTC +
Preference number: 2 (lower is better)
Translates to: SIVDSIANEQPHACCYHNDLEVV*LGPRGL
Trigger: GAGACCCCTTGGACCCAATCAAACCACTTCTAAGTC...ATTGTGGTAGCAGCAAGCGTGTGGCTGCTCATTGGCAATGCTATCAACTATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR-3UTR TCA 90 bp TCTATAGTTGATAGCATTGCCAATGAGCAGCCACACGCTTGCTGCTACCACAATAGTGGGCACAAGAGGTaGCACACTCCATTGAACATG +
Preference number: 2 (lower is better)
Translates to: SIVDSIANEQPHACCYHNSGHKR*HTPLNM
Trigger: CATGTTCAATGGAGTGTGTCACCTCTTGTGCCCACT...ATTGTGGTAGCAGCAAGCGTGTGGCTGCTCATTGGCAATGCTATCAACTATAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR-3UTR GCA 90 bp CTTTGCAAGCAATCTATAGTTGATAGCATTGCCAATGAGCAGCCACACGCTTGCACTGGAAAATCTTGGTaGACCCACGAGGTCCATGAG +
Preference number: 2 (lower is better)
Translates to: LCKQSIVDSIANEQPHACTGKSW*THEVHE
Trigger: CTCATGGACCTCGTGGGTGCACCAAGATTTTCCAGT...GCAAGCGTGTGGCTGCTCATTGGCAATGCTATCAACTATAGATTGCTTGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR-3UTR CCA 90 bp ATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCACCTAGCATTAGGACTATTACAAAAGCCTaGTATCCAGGTGCAATCTCA +
Preference number: 2 (lower is better)
Translates to: IHVPCWCAAPTNSSPSIRTITKA*YPGAIS
Trigger: TGAGATTGCACCTGGATACCAGGCTTTTGTAATAGT...CCTAATGCTAGGTGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR-3UTR CCA 90 bp ATAGCATTGCCAATGAGCAGCCACACGCTTGCTGCTACCACAATAGCCCCACAGTACTCATCAATTCCTTaGTCTTTAGCATATGGAGCC +
Preference number: 2 (lower is better)
Translates to: IALPMSSHTLAATTIAPQYSSIP*SLAYGA
Trigger: GGCTCCATATGCTAAAGACCAAGGAATTGATGAGTA...CTGTGGGGCTATTGTGGTAGCAGCAAGCGTGTGGCTGCTCATTGGCAATGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR-3UTR GCA 90 bp TCTATAGTTGATAGCATTGCCAATGAGCAGCCACACGCTTGCTGCTACCACAATATGGTTAAGGCGGGTTaGAGGTTGAAGGCTAAACCT +
Preference number: 2 (lower is better)
Translates to: SIVDSIANEQPHACCYHNMVKAG*RLKAKP
Trigger: AGGTTTAGCCTTCAACCTGCAACCCGCCTTAACCAT...ATTGTGGTAGCAGCAAGCGTGTGGCTGCTCATTGGCAATGCTATCAACTATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR-3UTR CCA 90 bp ATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCACCTAGCATTAGGTGCTCTGAATGGTTGTaGTTAGAAATCTTGTTGGTA +
Preference number: 2 (lower is better)
Translates to: IHVPCWCAAPTNSSPSIRCSEWL*LEILLV
Trigger: TACCAACAAGATTTCTAACCACAACCATTCAGAGCA...CCTAATGCTAGGTGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR-3UTR TCA 90 bp AAATATGTTCATACTAATTGTTGCAGAGGCAGAAGCCAAATATATCTCCTCCTCCCTGGAGAAGGCCACTaGAATGCACCCAGGAGGATG +
Preference number: 2 (lower is better)
Translates to: KYVHTNCCRGRSQIYLLLPGEGH*NAPRRM
Trigger: CATCCTCCTGGGTGCATTTCAGTGGCCTTCTCCAGG...GAGGAGGAGATATATTTGGCTTCTGCCTCTGCAACAATTAGTATGAACATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR-3UTR GCA 90 bp AAAGCTGCCGAGTACTCATCAATTCCTTGGTCTTTAGCATATGGAGCCAAGAATTCACCACCGGCCGGCTaGCGTATTTATTCACCAAAA +
Preference number: 2 (lower is better)
Translates to: KAAEYSSIPWSLAYGAKNSPPAG*RIYSPK
Trigger: TTTTGGTGAATAAATACGGCAGCCGGCCGGTGGTGA...ATTCTTGGCTCCATATGCTAAAGACCAAGGAATTGATGAGTACTCGGCAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR-3UTR GCA 90 bp ATTTTTAGACTTAGAAGTGGTTTGATTGGGTCCAAGGGGTCTCATGAGGGAACCATGGTTAAGGCGGGTTaGAGGTTGAAGGCTAAACCT +
Preference number: 2 (lower is better)
Translates to: IFRLRSGLIGSKGSHEGTMVKAG*RLKAKP
Trigger: AGGTTTAGCCTTCAACCTGCAACCCGCCTTAACCAT...GGTTCCCTCATGAGACCCCTTGGACCCAATCAAACCACTTCTAAGTCTAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR-3UTR GCA 90 bp ATTTTTAGACTTAGAAGTGGTTTGATTGGGTCCAAGGGGTCTCATGAGGGAACCGAAAACAGGACTTCCTaGCATGGCCAATCCATTTGC +
Preference number: 2 (lower is better)
Translates to: IFRLRSGLIGSKGSHEGTENRTS*HGQSIC
Trigger: GCAAATGGATTGGCCATGGCAGGAAGTCCTGTTTTC...GGTTCCCTCATGAGACCCCTTGGACCCAATCAAACCACTTCTAAGTCTAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR-3UTR CCA 90 bp ATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCACCTAGCATTAGGTTAGTCGTAGTCAGATaGAGTATTCATAACAGTAAC +
Preference number: 2 (lower is better)
Translates to: IHVPCWCAAPTNSSPSIRLVVVR*SIHNSN
Trigger: GTTACTGTTATGAATACTCCATCTGACTACGACTAA...CCTAATGCTAGGTGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR-3UTR GCA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTTTGCCTAGGCTGGACTaGAAGTGGGGCCATTATAGC +
Preference number: 2 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQILPRLD*KWGHYS
Trigger: GCTATAATGGCCCCACTTGCAGTCCAGCCTAGGCAA...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR-3UTR CCA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTAGGCTGGACTGCAAGTaGGGCCATTATAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQIRLDCK*GHYSSL
Trigger: CAGTGAGCTATAATGGCCCCACTTGCAGTCCAGCCT...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR-3UTR CCA 90 bp TCTATAGTTGATAGCATTGCCAATGAGCAGCCACACGCTTGCTGCTACCACAATAGTATTTGCCAATTATaGTTAAGGCGGGTTGCAGGT +
Preference number: 2 (lower is better)
Translates to: SIVDSIANEQPHACCYHNSICQL*LRRVAG
Trigger: ACCTGCAACCCGCCTTAACCATAATTGGCAAATACT...ATTGTGGTAGCAGCAAGCGTGTGGCTGCTCATTGGCAATGCTATCAACTATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR-3UTR CCA 90 bp ATTTTTAGACTTAGAAGTGGTTTGATTGGGTCCAAGGGGTCTCATGAGGGAACCCCAATCCATTTGCCATaGGTCGCTTCCTATAGAAGT +
Preference number: 2 (lower is better)
Translates to: IFRLRSGLIGSKGSHEGTPIHLP*VASYRS
Trigger: ACTTCTATAGGAAGCGACCCATGGCAAATGGATTGG...GGTTCCCTCATGAGACCCCTTGGACCCAATCAAACCACTTCTAAGTCTAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR-3UTR TCA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTGGCATTTCCAGTGGTTaGGCACAAGGCCTGTTTGTA +
Preference number: 2 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQIGISSG*AQGLFV
Trigger: TACAAACAGGCCTTGTGCTCAACCACTGGAAATGCC...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR-3UTR TCA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACAGCAGCCAGACAAATGTaGACTGGTTTTGACGTGACG +
Preference number: 2 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTAARQM*TGFDVT
Trigger: CGTCACGTCAAAACCAGTTCACATTTGTCTGGCTGC...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR-3UTR CCA 90 bp GATTGCAAAACTGAAGAAGTACTGAATTCGAGGTCGAATATATTTGGAGTTTGCCAGGACTTCCTGCCATaGCCAATCCATTTGCCATGG +
Preference number: 2 (lower is better)
Translates to: DCKTEEVLNSRSNIFGVCQDFLP*PIHLPW
Trigger: CCATGGCAAATGGATTGGCCATGGCAGGAAGTCCTG...GCAAACTCCAAATATATTCGACCTCGAATTCAGTACTTCTTCAGTTTTGCAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR-3UTR TCA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTTGCTACTGCCAGGTGTaGCTGTACAAATCATGTGCT +
Preference number: 2 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQICYCQV*LYKSCA
Trigger: AGCACATGATTTGTACAGTCACACCTGGCAGTAGCA...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR-3UTR TCA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTGTTCCCACCTATGAGTaGGAATATGCGGTGTTTGGT +
Preference number: 2 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQIVPTYE*EYAVFG
Trigger: ACCAAACACCGCATATTCTCACTCATAGGTGGGAAC...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR-3UTR TCA 90 bp TCCTTTTCCCAGATTCATCAGAGGAGTCATTATGTACGGCAGCTAGGCATGATCGAATCCTCAAGGATGTaGAGATCAAAAAGCTTTCAA +
Preference number: 2 (lower is better)
Translates to: SFSQIHQRSHYVRQLGMIESSRM*RSKSFQ
Trigger: TTGAAAGCTTTTTGATCTTCACATCCTTGAGGATTC...GATCATGCCTAGCTGCCGTACATAATGACTCCTCTGATGAATCTGGGAAAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546459.5
3UTR-3UTR TCA 90 bp TACATGTATTTATATTCTCCAGTTAAATCCACCAATTTACCTGCAAGAGGAGGGGACTTAGAAGTGGTTTaGTTGGGTCCAAGGGGTCTC +
Preference number: 2 (lower is better)
Translates to: YMYLYSPVKSTNLPARGGDLEVV*LGPRGL
Trigger: GAGACCCCTTGGACCCAATCAAACCACTTCTAAGTC...CCCTCCTCTTGCAGGTAAATTGGTGGATTTAACTGGAGAATATAAATACATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR-3UTR TCA 90 bp TACATGTATTTATATTCTCCAGTTAAATCCACCAATTTACCTGCAAGAGGAGGGCACCCACGAGGTCCATaGGAGTTTCAAAGAGAACAC +
Preference number: 2 (lower is better)
Translates to: YMYLYSPVKSTNLPARGGHPRGP*EFQREH
Trigger: GTGTTCTCTTTGAAACTCTCATGGACCTCGTGGGTG...CCCTCCTCTTGCAGGTAAATTGGTGGATTTAACTGGAGAATATAAATACATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR-3UTR CCA 90 bp CTAGCAAACATATCAACGAAAGCCATAACAGATAGCAGAAAAGCTGCCGAGTACAGTATTTGCCAATTATaGTTAAGGCGGGTTGCAGGT +
Preference number: 2 (lower is better)
Translates to: LANISTKAITDSRKAAEYSICQL*LRRVAG
Trigger: ACCTGCAACCCGCCTTAACCATAATTGGCAAATACT...GTACTCGGCAGCTTTTCTGCTATCTGTTATGGCTTTCGTTGATATGTTTGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR-3UTR TCA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTAGGCCAATGAGTCCATaGGCTAAAGGGTTGAAACTT +
Preference number: 2 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQIRPMSP*AKGLKL
Trigger: AAGTTTCAACCCTTTAGCTCATGGACTCATTGGCCT...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR CAA 90 bp TGTGCATTTGAAACTTTGACGTTAACATCTTCCGAATGTTTAGATTaGCTCAAGGGTTCAGATTCTCTGGTCTTCTGCCTTGCATTTTCC +
Preference number: 2 (lower is better)
Translates to: CAFETLTLTSSECLD*LKGSDSLVFCLAFS
Trigger: GGAAAATGCAAGGCAGAAGACCAGAGAATCTGAACCCTTGAGCAAATCTAAACATTCGGAAGATGTTAACGTCAAAGTTTCAAATGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR-3UTR TCA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACAAATGTGAACTGGTTTTaGCGTGACGAGAAACTCATC +
Preference number: 2 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTNVNWF*RDEKLI
Trigger: GATGAGTTTCTCGTCACGTCAAAACCAGTTCACATT...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR-3UTR TCA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTGGTATGATGTATCAGTaGTGTCACTGCATTGATGGA +
Preference number: 2 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQIGMMYQ*CHCIDG
Trigger: TCCATCAATGCAGTGACATCACTGATACATCATACC...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR-3UTR TCA 90 bp CTAGCAAACATATCAACGAAAGCCATAACAGATAGCAGAAAAGCTGCCGAGTACGAATCCTCAAGGATGTaGAGATCAAAAAGCTTTCAA +
Preference number: 2 (lower is better)
Translates to: LANISTKAITDSRKAAEYESSRM*RSKSFQ
Trigger: TTGAAAGCTTTTTGATCTTCACATCCTTGAGGATTC...GTACTCGGCAGCTTTTCTGCTATCTGTTATGGCTTTCGTTGATATGTTTGCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549928.5
3UTR-3UTR CCA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACAGAAGAAGCAGGAGATTaGGATGGGAGATGTAATTTG +
Preference number: 2 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTEEAGD*DGRCNL
Trigger: CAAATTACATCTCCCATCCCAATCTCCTGCTTCTTC...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR-3UTR TCA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACACTCTGTATTCAGGAGTaGTTCAAATTCCCAGATGTT +
Preference number: 2 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTLCIQE*FKFPDV
Trigger: AACATCTGGGAATTTGAATCACTCCTGAATACAGAG...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR-3UTR TCA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACAATGGCTAATTCCCTTTaGCATCTTAAGAGTGACACT +
Preference number: 2 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTMANSL*HLKSDT
Trigger: AGTGTCACTCTTAAGATGTCAAAGGGAATTAGCCAT...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR-3UTR GCA 90 bp AAATATGTTCATACTAATTGTTGCAGAGGCAGAAGCCAAATATATCTCCTCCTCAGAATTTTCAAGTGCTaGCATTCTTATCCCAGGAGG +
Preference number: 2 (lower is better)
Translates to: KYVHTNCCRGRSQIYLLLRIFKC*HSYPRR
Trigger: CCTCCTGGGATAAGAATGGCAGCACTTGAAAATTCT...GAGGAGGAGATATATTTGGCTTCTGCCTCTGCAACAATTAGTATGAACATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR-3UTR CCA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTTACTCTGTGTACATGTaGGTAAGTATGTGGGAGTAT +
Preference number: 2 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQIYSVYM*VSMWEY
Trigger: ATACTCCCACATACTTACCCACATGTACACAGAGTA...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR-3UTR CCA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACAACGAATTATCTGCCGTaGCAATCAGGAAATAGTCTT +
Preference number: 2 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTTNYLP*QSGNSL
Trigger: AAGACTATTTCCTGATTGCCACGGCAGATAATTCGT...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR-3UTR GCA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACACTCAAACATGAGTTCTaGATATGGTTGTGCAGAAAT +
Preference number: 2 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTLKHEF*IWLCRN
Trigger: ATTTCTGCACAACCATATGCAGAACTCATGTTTGAG...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR-3UTR CCA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACAGCTTTTAAAGTTTCCTaGCTTAGTTATGTCCAAAGG +
Preference number: 2 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTAFKVS*LSYVQR
Trigger: CCTTTGGACATAACTAAGCCAGGAAACTTTAAAAGC...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR-3UTR CCA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTGCTTTTAAAGTTTCCTaGCTTAGTTATGTCCAAAGG +
Preference number: 2 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQIAFKVS*LSYVQR
Trigger: CCTTTGGACATAACTAAGCCAGGAAACTTTAAAAGC...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR CAA 90 bp ATGTTAGTTTCTCTTTCTGAGGTTACACTCTGTGCATTTGAAACTTaGACGTTAACATCTTCCGAATGTTTAGATTTGCTCAAGGGTTCA +
Preference number: 2 (lower is better)
Translates to: MLVSLSEVTLCAFET*TLTSSECLDLLKGS
Trigger: TGAACCCTTGAGCAAATCTAAACATTCGGAAGATGTTAACGTCAAAGTTTCAAATGCACAGAGTGTAACCTCAGAAAGAGAAACTAACAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR-3UTR CCA 90 bp CTTTCTGGATTACGAACTAAAATCCCTGTAAAATCAATGGATGTGACTCATTGTTACTCTGTGTACATGTaGGTAAGTATGTGGGAGTAT +
Preference number: 2 (lower is better)
Translates to: LSGLRTKIPVKSMDVTHCYSVYM*VSMWEY
Trigger: ATACTCCCACATACTTACCCACATGTACACAGAGTA...ACAATGAGTCACATCCATTGATTTTACAGGGATTTTAGTTCGTAATCCAGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR-3UTR CCA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTAGTGCTGAATTAAACTaGGCTGCAATATTTCAAGTT +
Preference number: 2 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQISAELN*AAIFQV
Trigger: AACTTGAAATATTGCAGCCCAGTTTAATTCAGCACT...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR CCA 72 bp GAAACCCCACCTTTAATCCAGAGACAGCCTGAGGCCTaGGGGTCAGACTGTCAGTTCTGGGTAGTCGTGGCT +
Preference number: 3 (lower is better)
Translates to: ETPPLIQRQPEA*GSDCQFWVVVA
Trigger: AGCCACGACTACCCAGAACTGACAGTCTGACCCCCAGGCCTCAGGCTGTCTCTGGATTAAAGGTGGGGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550062.5
3UTR-3UTR CAA 90 bp ATAGCATTGCCAATGAGCAGCCACACGCTTGCTGCTACCACAATAGCCCCACAGCGGCACTGGAAAATCTaGGTGCACCCACGAGGTCCA +
Preference number: 3 (lower is better)
Translates to: IALPMSSHTLAATTIAPQRHWKI*VHPRGP
Trigger: TGGACCTCGTGGGTGCACCAAGATTTTCCAGTGCCG...CTGTGGGGCTATTGTGGTAGCAGCAAGCGTGTGGCTGCTCATTGGCAATGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR TCA 72 bp GAGGGCCAAGAAGAACTGGGCCACACTCCACAATTGTaGCAAGTCCGACGGCACTGGAAAATCTTGGTGCAC +
Preference number: 3 (lower is better)
Translates to: EGQEELGHTPQL*QVRRHWKILVH
Trigger: GTGCACCAAGATTTTCCAGTGCCGTCGGACTTGTCACAATTGTGGAGTGTGGCCCAGTTCTTCTTGGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR CCA 72 bp CACCAATTTACCTGCAAGAGGAGGGCCAAGAAGAACTaGGCCACACTCCACAATTGTGACAAGTCCGACGGC +
Preference number: 3 (lower is better)
Translates to: HQFTCKRRAKKN*ATLHNCDKSDG
Trigger: GCCGTCGGACTTGTCACAATTGTGGAGTGTGGCCCAGTTCTTCTTGGCCCTCCTCTTGCAGGTAAATTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR CCA 72 bp TGGTGGGAGGCAGACAGATTCCTGGGCAGAAAGGGGTaGATCCTTGGTGAAACCCCACCTTTAATCCAGAGA +
Preference number: 3 (lower is better)
Translates to: WWEADRFLGRKG*ILGETPPLIQR
Trigger: TCTCTGGATTAAAGGTGGGGTTTCACCAAGGATCCACCCCTTTCTGCCCAGGAATCTGTCTGCCTCCCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550062.5
3UTR TCA 72 bp CTCACTGCAACTACTGAGGCCTGCCTCCTGTCAGAATaGCAATGCAGTCTTAGCATACGGGTGTCGGTTTGG +
Preference number: 3 (lower is better)
Translates to: LTATTEACLLSE*QCSLSIRVSVW
Trigger: CCAAACCGACACCCGTATGCTAAGACTGCATTGTCATTCTGACAGGAGGCAGGCCTCAGTAGTTGCAGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR TCA 72 bp TTCCGTGGCTCTCCTAAGAGTTGTTTTGTTGCTCAGTaGAGCTCCTCTCTGCCTTGCTCGCTCTCCGGTTGT +
Preference number: 3 (lower is better)
Translates to: FRGSPKSCFVAQ*SSSLPCSLSGC
Trigger: ACAACCGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACAAAACAACTCTTAGGAGAGCCACGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549305.1
3UTR TCA 72 bp AGTCGTGGCTCTCCTAAGAGTTGTTTTGTTGCTCAGTaGAGCTCCTCTCTGCCTTGCTCGCTCTCCGGTTGT +
Preference number: 3 (lower is better)
Translates to: SRGSPKSCFVAQ*SSSLPCSLSGC
Trigger: ACAACCGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACAAAACAACTCTTAGGAGAGCCACGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551877.5
3UTR-3UTR CAA 90 bp ATAGCATTGCCAATGAGCAGCCACACGCTTGCTGCTACCACAATAGCCCCACAGAAGGCGGGTTGCAGGTaGAAGGCTAAACCTAAACCT +
Preference number: 3 (lower is better)
Translates to: IALPMSSHTLAATTIAPQKAGCR*KAKPKP
Trigger: AGGTTTAGGTTTAGCCTTCAACCTGCAACCCGCCTT...CTGTGGGGCTATTGTGGTAGCAGCAAGCGTGTGGCTGCTCATTGGCAATGCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR-3UTR CAA 90 bp CTTTGCAAGCAATCTATAGTTGATAGCATTGCCAATGAGCAGCCACACGCTTGCCGGCACTGGAAAATCTaGGTGCACCCACGAGGTCCA +
Preference number: 3 (lower is better)
Translates to: LCKQSIVDSIANEQPHACRHWKI*VHPRGP
Trigger: TGGACCTCGTGGGTGCACCAAGATTTTCCAGTGCCG...GCAAGCGTGTGGCTGCTCATTGGCAATGCTATCAACTATAGATTGCTTGCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR GCA 72 bp GTTGATAGCATTGCCAATGAGCAGCCACACGCTTGCTaGTACCACAATAGCCCCACAGGACATGTACATGTA +
Preference number: 3 (lower is better)
Translates to: VDSIANEQPHAC*YHNSPTGHVHV
Trigger: TACATGTACATGTCCTGTGGGGCTATTGTGGTAGCAGCAAGCGTGTGGCTGCTCATTGGCAATGCTATCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR CCA 72 bp CACAATTGTGACAAGTCCGACGGCACTGGAAAATCTTaGTGCACCCACGAGGTCCATGAGAGTTTCAAAGAG +
Preference number: 3 (lower is better)
Translates to: HNCDKSDGTGKS*CTHEVHESFKE
Trigger: CTCTTTGAAACTCTCATGGACCTCGTGGGTGCACCAAGATTTTCCAGTGCCGTCGGACTTGTCACAATTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR-3UTR CAA 90 bp CCGACGGCACTGGAAAATCTTGGTGCACCCACGAGGTCCATGAGAGTTTCAAAGGTACTCATCAATTCCTaGGTCTTTAGCATATGGAGC +
Preference number: 3 (lower is better)
Translates to: PTALENLGAPTRSMRVSKVLINS*VFSIWS
Trigger: GCTCCATATGCTAAAGACCAAGGAATTGATGAGTAC...CTTTGAAACTCTCATGGACCTCGTGGGTGCACCAAGATTTTCCAGTGCCGTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR TCA 72 bp GCTGCCATTCTTATCCCAGGAGGCATTTCCAGTGGTTaGGCACAAGGCCTGTTTGTAGTTTGCTTTTGCTCT +
Preference number: 3 (lower is better)
Translates to: AAILIPGGISSG*AQGLFVVCFCS
Trigger: AGAGCAAAAGCAAACTACAAACAGGCCTTGTGCTCAACCACTGGAAATGCCTCCTGGGATAAGAATGGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR GCA 72 bp AGCATAATAAGCCTCCTGCTATCACCACCGGCCGGCTaGCGTATTTATTCACCAAAACACTACTTACAGGAC +
Preference number: 3 (lower is better)
Translates to: SIISLLLSPPAG*RIYSPKHYLQD
Trigger: GTCCTGTAAGTAGTGTTTTGGTGAATAAATACGGCAGCCGGCCGGTGGTGATAGCAGGAGGCTTATTATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR GCA 72 bp ATAGTTGATAGCATTGCCAATGAGCAGCCACACGCTTaGTGCTACCACAATAGCCCCACAGGACATGTACAT +
Preference number: 3 (lower is better)
Translates to: IVDSIANEQPHA*CYHNSPTGHVH
Trigger: ATGTACATGTCCTGTGGGGCTATTGTGGTAGCAGCAAGCGTGTGGCTGCTCATTGGCAATGCTATCAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR-3UTR CAA 90 bp ATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCACCTAGCATTAGGATGTCACTGTTTCAATaGTGTTCTGGTTTAACTGTC +
Preference number: 3 (lower is better)
Translates to: IHVPCWCAAPTNSSPSIRMSLFQ*CSGLTV
Trigger: GACAGTTAAACCAGAACACAATTGAAACAGTGACAT...CCTAATGCTAGGTGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR-3UTR CAA 90 bp TCTATAGTTGATAGCATTGCCAATGAGCAGCCACACGCTTGCTGCTACCACAATAGACTTAGAAGTGGTTaGATTGGGTCCAAGGGGTCT +
Preference number: 3 (lower is better)
Translates to: SIVDSIANEQPHACCYHNRLRSG*IGSKGS
Trigger: AGACCCCTTGGACCCAATCAAACCACTTCTAAGTCT...ATTGTGGTAGCAGCAAGCGTGTGGCTGCTCATTGGCAATGCTATCAACTATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR CCA 72 bp AAGTGCTGCCATTCTTATCCCAGGAGGCATTTCCAGTaGTTGAGCACAAGGCCTGTTTGTAGTTTGCTTTTG +
Preference number: 3 (lower is better)
Translates to: KCCHSYPRRHFQ*LSTRPVCSLLL
Trigger: CAAAAGCAAACTACAAACAGGCCTTGTGCTCAACCACTGGAAATGCCTCCTGGGATAAGAATGGCAGCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR TCA 72 bp GATCCTTATATTAGTAAATGCACTCACTGCAACTACTaGGGCCTGCCTCCTGTCAGAATGACAATGCAGTCT +
Preference number: 3 (lower is better)
Translates to: DPYISKCTHCNY*GLPPVRMTMQS
Trigger: AGACTGCATTGTCATTCTGACAGGAGGCAGGCCTCAGTAGTTGCAGTGAGTGCATTTACTAATATAAGGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR-3UTR CAA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTGCATCATGGCTGACTTaGAGAAGAATGCAGCGCCTT +
Preference number: 3 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQIASWLT*RRMQRL
Trigger: AAGGCGCTGCATTCTTCTCAAAGTCAGCCATGATGC...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR-3UTR CAA 90 bp GATTGCAAAACTGAAGAAGTACTGAATTCGAGGTCGAATATATTTGGAGTTTGCCCATGGCCAATCCATTaGCCATGGGTCGCTTCCTAT +
Preference number: 3 (lower is better)
Translates to: DCKTEEVLNSRSNIFGVCPWPIH*PWVASY
Trigger: ATAGGAAGCGACCCATGGCAAATGGATTGGCCATGG...GCAAACTCCAAATATATTCGACCTCGAATTCAGTACTTCTTCAGTTTTGCAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR CCA 72 bp GATAGCAGAAAAGCTGCCGAGTACTCATCAATTCCTTaGTCTTTAGCATATGGAGCCAAGAATATAATGGGG +
Preference number: 3 (lower is better)
Translates to: DSRKAAEYSSIP*SLAYGAKNIMG
Trigger: CCCCATTATATTCTTGGCTCCATATGCTAAAGACCAAGGAATTGATGAGTACTCGGCAGCTTTTCTGCTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR TCA 72 bp TGCATATTTGTAACTGTGCAGTGCTACTGCCAGGTGTaGCTGTACAAATCATGTGCTTTGAATGTGCAAGTT +
Preference number: 3 (lower is better)
Translates to: CIFVTVQCYCQV*LYKSCALNVQV
Trigger: AACTTGCACATTCAAAGCACATGATTTGTACAGTCACACCTGGCAGTAGCACTGCACAGTTACAAATATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR TCA 72 bp TATTTATTCACCAAAACACTACTTACAGGACTTCACTaGAGTCCTGAGCCTCTTAAAGTCACCCATGAGGAT +
Preference number: 3 (lower is better)
Translates to: YLFTKTLLTGLH*SPEPLKVTHED
Trigger: ATCCTCATGGGTGACTTTAAGAGGCTCAGGACTTCAGTGAAGTCCTGTAAGTAGTGTTTTGGTGAATAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549033.5
3UTR-3UTR CAA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTTGGTATACCCTGACTTaGCTTCATGATATCTCAAAT +
Preference number: 3 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQIWYTLT*LHDISN
Trigger: ATTTGAGATATCATGAAGCAAAGTCAGGGTATACCA...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR-3UTR CAA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTATATTTTATCTTCCTTaGCTTCTCTGGCCTCTATTG +
Preference number: 3 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQIIFYLP*LLWPLL
Trigger: CAATAGAGGCCAGAGAAGCAAAGGAAGATAAAATAT...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR TCA 72 bp AGGCAGAAGCCAAATATATCTCCTCCTCCATTTATGTaGCTATATAGTAATGAAAATCCTAGGTTGATACAC +
Preference number: 3 (lower is better)
Translates to: RQKPNISPPPFM*LYSNENPRLIH
Trigger: GTGTATCAACCTAGGATTTTCATTACTATATAGTCACATAAATGGAGGAGGAGATATATTTGGCTTCTGCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR GCA 72 bp TTAGAAGTTAAAAGACCTGAATTCTATCTCCAACCCTaGATTTATTCAGAGTATTGGTATAGGTTTAGGCAA +
Preference number: 3 (lower is better)
Translates to: LEVKRPEFYLQP*IYSEYWYRFRQ
Trigger: TTGCCTAAACCTATACCAATACTCTGAATAAATGCAGGGTTGGAGATAGAATTCAGGTCTTTTAACTTCTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp CTGGGTGCCATGGAGGGCATGTTGATGGTGGGAGGCAGACAGATTCCTGGGCAGAATCCAGAGACAGCCTaGGGCCTGGGGGTCAGACTG +
Preference number: 4 (lower is better)
Translates to: LGAMEGMLMVGGRQIPGQNPETA*GLGVRL
Trigger: CAGTCTGACCCCCAGGCCTCAGGCTGTCTCTGGATT...CTGCCCAGGAATCTGTCTGCCTCCCACCATCAACATGCCCTCCATGGCACCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550062.5
CDS-3UTR CCA 90 bp GGGTGCCATGGAGGGCATGTTGATGGTGGGAGGCAGACAGATTCCTGGGCAGAAAGGTGGATGCACAGGTaGGGCACTTGGCATTGGTGG +
Preference number: 4 (lower is better)
Translates to: GCHGGHVDGGRQTDSWAERWMHR*GTWHWW
Trigger: CCACCAATGCCAAGTGCCCCACCTGTGCATCCACCT...TTCTGCCCAGGAATCTGTCTGCCTCCCACCATCAACATGCCCTCCATGGCACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550062.5
CDS-3UTR TCA 90 bp GGTGCCATGGAGGGCATGTTGATGGTGGGAGGCAGACAGATTCCTGGGCAGAAACCATGGAGGGCATGTTaGTGGTGGGAGGCAGACAGA +
Preference number: 4 (lower is better)
Translates to: GAMEGMLMVGGRQIPGQKPWRAC*WWEADR
Trigger: TCTGTCTGCCTCCCACCATCAACATGCCCTCCATGG...TTTCTGCCCAGGAATCTGTCTGCCTCCCACCATCAACATGCCCTCCATGGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550062.5
CDS-3UTR CCA 90 bp TGTTGCTCAGTGAAGCTCCTCTCTGCCTTGCTCGCTCTCCGGTTGTCCATGTGCAGGTGGATGCACAGGTaGGGCACTTGGCATTGGTGG +
Preference number: 4 (lower is better)
Translates to: CCSVKLLSALLALRLSMCRWMHR*GTWHWW
Trigger: CCACCAATGCCAAGTGCCCCACCTGTGCATCCACCT...GCACATGGACAACCGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549305.1
ENST00000551877.5
CDS-3UTR CCA 90 bp GGTGCCATGGAGGGCATGTTGATGGTGGGAGGCAGACAGATTCCTGGGCAGAAAACCCCATCCTCCATCTaGAGGTGGATGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: GAMEGMLMVGGRQIPGQKTPSSI*RWMHRW
Trigger: CCACCTGTGCATCCACCTCCAGATGGAGGATGGGGT...TTTCTGCCCAGGAATCTGTCTGCCTCCCACCATCAACATGCCCTCCATGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550062.5
CDS-3UTR CCA 90 bp ACCATTCCAAGACAGCATAATAAGCCTCCTGCTATCACCACCGGCCGGCTGCCGCACAGGTGGGGCACTTaGCATTGGTGGCATTTCTGC +
Preference number: 4 (lower is better)
Translates to: TIPRQHNKPPAITTGRLPHRWGT*HWWHFC
Trigger: GCAGAAATGCCACCAATGCCAAGTGCCCCACCTGTG...CGGCAGCCGGCCGGTGGTGATAGCAGGAGGCTTATTATGCTGTCTTGGAATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CCA 90 bp AAGGGGTGGATCCTTGGTGAAACCCCACCTTTAATCCAGAGACAGCCTGAGGCCTCCTCCATCTGGAGGTaGATGCACAGGTGGGGCACT +
Preference number: 4 (lower is better)
Translates to: KGWILGETPPLIQRQPEASSIWR*MHRWGT
Trigger: AGTGCCCCACCTGTGCATCCACCTCCAGATGGAGGA...GGCCTCAGGCTGTCTCTGGATTAAAGGTGGGGTTTCACCAAGGATCCACCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550062.5
CDS-3UTR TCA 90 bp TTGTTGCTCAGTGAAGCTCCTCTCTGCCTTGCTCGCTCTCCGGTTGTCCATGTGCATTCTTCCTGGAGGTaGGATGGGAGCTTGGGACCT +
Preference number: 4 (lower is better)
Translates to: LLLSEAPLCLARSPVVHVHSSWR*DGSLGP
Trigger: AGGTCCCAAGCTCCCATCTCACCTCCAGGAAGAATG...CACATGGACAACCGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549305.1
ENST00000551877.5
CDS-3UTR GCA 90 bp GATGGTGGGAGGCAGACAGATTCCTGGGCAGAAAGGGGTGGATCCTTGGTGAAAAGTGAAGCTCCTCTCTaGCTTGCTCGCTCTCCGGTT +
Preference number: 4 (lower is better)
Translates to: DGGRQTDSWAERGGSLVKSEAPL*LARSPV
Trigger: AACCGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACT...TTTCACCAAGGATCCACCCCTTTCTGCCCAGGAATCTGTCTGCCTCCCACCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550062.5
CDS-3UTR CCA 90 bp AAGGGGTGGATCCTTGGTGAAACCCCACCTTTAATCCAGAGACAGCCTGAGGCCCACAGGTGGGGCACTTaGCATTGGTGGCATTTCTGC +
Preference number: 4 (lower is better)
Translates to: KGWILGETPPLIQRQPEAHRWGT*HWWHFC
Trigger: GCAGAAATGCCACCAATGCCAAGTGCCCCACCTGTG...GGCCTCAGGCTGTCTCTGGATTAAAGGTGGGGTTTCACCAAGGATCCACCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550062.5
CDS-3UTR CCA 90 bp ATAGCATTGCCAATGAGCAGCCACACGCTTGCTGCTACCACAATAGCCCCACAGAGGTGGATGCACAGGTaGGGCACTTGGCATTGGTGG +
Preference number: 4 (lower is better)
Translates to: IALPMSSHTLAATTIAPQRWMHR*GTWHWW
Trigger: CCACCAATGCCAAGTGCCCCACCTGTGCATCCACCT...CTGTGGGGCTATTGTGGTAGCAGCAAGCGTGTGGCTGCTCATTGGCAATGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CCA 90 bp GTTTTGTTGCTCAGTGAAGCTCCTCTCTGCCTTGCTCGCTCTCCGGTTGTCCATTCCTCCATCTGGAGGTaGATGCACAGGTGGGGCACT +
Preference number: 4 (lower is better)
Translates to: VLLLSEAPLCLARSPVVHSSIWR*MHRWGT
Trigger: AGTGCCCCACCTGTGCATCCACCTCCAGATGGAGGA...ATGGACAACCGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549305.1
ENST00000551877.5
CDS-3UTR CCA 90 bp TTGTTTTGTTGCTCAGTGAAGCTCCTCTCTGCCTTGCTCGCTCTCCGGTTGTCCACCCCATCCTCCATCTaGAGGTGGATGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: LFCCSVKLLSALLALRLSTPSSI*RWMHRW
Trigger: CCACCTGTGCATCCACCTCCAGATGGAGGATGGGGT...GGACAACCGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACAAAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549305.1
ENST00000551877.5
CDS-3UTR TCA 90 bp GTAATGAATCCCATAGTGAGGTACAGCTGTACCACGCTGCTACTAAAGGAGGCCGTCCAAGGGGTCTCATaGGGGAACCAGCCACACAGG +
Preference number: 4 (lower is better)
Translates to: VMNPIVRYSCTTLLLKEAVQGVS*GNQPHR
Trigger: CCTGTGTGGCTGGTTCCCTCATGAGACCCCTTGGAC...GGCCTCCTTTAGTAGCAGCGTGGTACAGCTGTACCTCACTATGGGATTCATTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR TCA 90 bp AAGGGGTGGATCCTTGGTGAAACCCCACCTTTAATCCAGAGACAGCCTGAGGCCGGGGTGGATCCTTGGTaGAACCCCACCTTTAATCCA +
Preference number: 4 (lower is better)
Translates to: KGWILGETPPLIQRQPEAGVDPW*NPTFNP
Trigger: TGGATTAAAGGTGGGGTTTCACCAAGGATCCACCCC...GGCCTCAGGCTGTCTCTGGATTAAAGGTGGGGTTTCACCAAGGATCCACCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000550062.5
CDS-3UTR GCA 90 bp CCGACGGCACTGGAAAATCTTGGTGCACCCACGAGGTCCATGAGAGTTTCAAAGGCTTGTGTAGTCCTGTaGCAGTGGGCACAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: PTALENLGAPTRSMRVSKACVVL*QWAQEV
Trigger: CACCTCTTGTGCCCACTGGCACAGGACTACACAAGC...CTTTGAAACTCTCATGGACCTCGTGGGTGCACCAAGATTTTCCAGTGCCGTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR GCA 90 bp ACCATTCCAAGACAGCATAATAAGCCTCCTGCTATCACCACCGGCCGGCTGCCGACTGGAAAATCTTGGTaGACCCACGAGGTCCATGAG +
Preference number: 4 (lower is better)
Translates to: TIPRQHNKPPAITTGRLPTGKSW*THEVHE
Trigger: CTCATGGACCTCGTGGGTGCACCAAGATTTTCCAGT...CGGCAGCCGGCCGGTGGTGATAGCAGGAGGCTTATTATGCTGTCTTGGAATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CCA 90 bp GGTGCCATGGAGGGCATGTTGATGGTGGGAGGCAGACAGATTCCTGGGCAGAAAGGCACTTGGCATTGGTaGCATTTCTGCTCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: GAMEGMLMVGGRQIPGQKGTWHW*HFCSSS
Trigger: ACTAGAGGAGCAGAAATGCCACCAATGCCAAGTGCC...TTTCTGCCCAGGAATCTGTCTGCCTCCCACCATCAACATGCCCTCCATGGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550062.5
CDS-3UTR CCA 90 bp ATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCACCTAGCATTAGGCACAGGTGGGGCACTTaGCATTGGTGGCATTTCTGC +
Preference number: 4 (lower is better)
Translates to: IHVPCWCAAPTNSSPSIRHRWGT*HWWHFC
Trigger: GCAGAAATGCCACCAATGCCAAGTGCCCCACCTGTG...CCTAATGCTAGGTGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp AGAGTTGTTTTGTTGCTCAGTGAAGCTCCTCTCTGCCTTGCTCGCTCTCCGGTTAGGTGGATGCACAGGTaGGGCACTTGGCATTGGTGG +
Preference number: 4 (lower is better)
Translates to: RVVLLLSEAPLCLARSPVRWMHR*GTWHWW
Trigger: CCACCAATGCCAAGTGCCCCACCTGTGCATCCACCT...AACCGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACAAAACAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549305.1
ENST00000551877.5
CDS-3UTR CCA 90 bp AGAGTTGTTTTGTTGCTCAGTGAAGCTCCTCTCTGCCTTGCTCGCTCTCCGGTTTTCCTGGAGGTGAGATaGGAGCTTGGGACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RVVLLLSEAPLCLARSPVFLEVR*ELGTCS
Trigger: GGAGCAGGTCCCAAGCTCCCATCTCACCTCCAGGAA...AACCGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACAAAACAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549305.1
CDS-3UTR GCA 90 bp CAAGACAGCATAATAAGCCTCCTGCTATCACCACCGGCCGGCTGCCGTATTTATCAGCCACACGCTTGCTaGTACCACAATAGCCCCACA +
Preference number: 4 (lower is better)
Translates to: QDSIISLLLSPPAGCRIYQPHAC*YHNSPT
Trigger: TGTGGGGCTATTGTGGTAGCAGCAAGCGTGTGGCTG...ATAAATACGGCAGCCGGCCGGTGGTGATAGCAGGAGGCTTATTATGCTGTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR GCA 90 bp GTAATGAATCCCATAGTGAGGTACAGCTGTACCACGCTGCTACTAAAGGAGGCCGAGCAGCCACACGCTTaGTGCTACCACAATAGCCCC +
Preference number: 4 (lower is better)
Translates to: VMNPIVRYSCTTLLLKEAEQPHA*CYHNSP
Trigger: GGGGCTATTGTGGTAGCAGCAAGCGTGTGGCTGCTC...GGCCTCCTTTAGTAGCAGCGTGGTACAGCTGTACCTCACTATGGGATTCATTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR GCA 90 bp TTGTTTTGTTGCTCAGTGAAGCTCCTCTCTGCCTTGCTCGCTCTCCGGTTGTCCGAGCTTGGGACCTCCTaGGTACATAACAGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: LFCCSVKLLSALLALRLSELGTS*VHNSQH
Trigger: ATGCTGGCTGTTATGTACGCAGGAGGTCCCAAGCTC...GGACAACCGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACAAAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551877.5
CDS-3UTR GCA 90 bp TTGTTTTGTTGCTCAGTGAAGCTCCTCTCTGCCTTGCTCGCTCTCCGGTTGTCCCTTGGGACCTGCTCCTaGGTACATAACAGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: LFCCSVKLLSALLALRLSLGTCS*VHNSQH
Trigger: ATGCTGGCTGTTATGTACGCAGGAGCAGGTCCCAAG...GGACAACCGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACAAAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549305.1
CDS-3UTR CCA 90 bp ATAGCATTGCCAATGAGCAGCCACACGCTTGCTGCTACCACAATAGCCCCACAGTGGGGCACTTGGCATTaGTGGCATTTCTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: IALPMSSHTLAATTIAPQWGTWH*WHFCSS
Trigger: AGAGGAGCAGAAATGCCACCAATGCCAAGTGCCCCA...CTGTGGGGCTATTGTGGTAGCAGCAAGCGTGTGGCTGCTCATTGGCAATGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CCA 90 bp GTTTTGTTGCTCAGTGAAGCTCCTCTCTGCCTTGCTCGCTCTCCGGTTGTCCATTGGGGCACTTGGCATTaGTGGCATTTCTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: VLLLSEAPLCLARSPVVHWGTWH*WHFCSS
Trigger: AGAGGAGCAGAAATGCCACCAATGCCAAGTGCCCCA...ATGGACAACCGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549305.1
ENST00000551877.5
CDS-3UTR CCA 90 bp CTAAGAGTTGTTTTGTTGCTCAGTGAAGCTCCTCTCTGCCTTGCTCGCTCTCCGCACAGGTGGGGCACTTaGCATTGGTGGCATTTCTGC +
Preference number: 4 (lower is better)
Translates to: LRVVLLLSEAPLCLARSPHRWGT*HWWHFC
Trigger: GCAGAAATGCCACCAATGCCAAGTGCCCCACCTGTG...CGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACAAAACAACTCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549305.1
ENST00000551877.5
CDS-3UTR CCA 90 bp GTGGCTCTCCTAAGAGTTGTTTTGTTGCTCAGTGAAGCTCCTCTCTGCCTTGCTTCCTCCATCTGGAGGTaGATGCACAGGTGGGGCACT +
Preference number: 4 (lower is better)
Translates to: VALLRVVLLLSEAPLCLASSIWR*MHRWGT
Trigger: AGTGCCCCACCTGTGCATCCACCTCCAGATGGAGGA...AGCAAGGCAGAGAGGAGCTTCACTGAGCAACAAAACAACTCTTAGGAGAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549305.1
ENST00000551877.5
CDS-3UTR CCA 90 bp CAATTTACCTGCAAGAGGAGGGCCAAGAAGAACTGGGCCACACTCCACAATTGTACCCCATCCTCCATCTaGAGGTGGATGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: QFTCKRRAKKNWATLHNCTPSSI*RWMHRW
Trigger: CCACCTGTGCATCCACCTCCAGATGGAGGATGGGGT...ACAATTGTGGAGTGTGGCCCAGTTCTTCTTGGCCCTCCTCTTGCAGGTAAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CCA 90 bp CTCCTAAGAGTTGTTTTGTTGCTCAGTGAAGCTCCTCTCTGCCTTGCTCGCTCTACCCCATCCTCCATCTaGAGGTGGATGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: LLRVVLLLSEAPLCLARSTPSSI*RWMHRW
Trigger: CCACCTGTGCATCCACCTCCAGATGGAGGATGGGGT...AGAGCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACAAAACAACTCTTAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549305.1
ENST00000551877.5
CDS-3UTR CCA 90 bp ATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCACCTAGCATTAGGAGGCTGGACTGCAAGTaGGGCCATTATAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: IHVPCWCAAPTNSSPSIRRLDCK*GHYSSL
Trigger: CAGTGAGCTATAATGGCCCCACTTGCAGTCCAGCCT...CCTAATGCTAGGTGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp TGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGGGGTTTGGGATTCAGGTCCAAGGGGTCTCATaGGGGAACCAGCCACACAGG +
Preference number: 4 (lower is better)
Translates to: CRIRHPPSTYLNQGFGIQVQGVS*GNQPHR
Trigger: CCTGTGTGGCTGGTTCCCTCATGAGACCCCTTGGAC...CTGAATCCCAAACCCCTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR TCA 90 bp ATAGCATTGCCAATGAGCAGCCACACGCTTGCTGCTACCACAATAGCCCCACAGGACTTAGAAGTGGTTTaGTTGGGTCCAAGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: IALPMSSHTLAATTIAPQDLEVV*LGPRGL
Trigger: GAGACCCCTTGGACCCAATCAAACCACTTCTAAGTC...CTGTGGGGCTATTGTGGTAGCAGCAAGCGTGTGGCTGCTCATTGGCAATGCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR TCA 90 bp CCGACGGCACTGGAAAATCTTGGTGCACCCACGAGGTCCATGAGAGTTTCAAAGAGTGGGCACAAGAGGTaGCACACTCCATTGAACATG +
Preference number: 4 (lower is better)
Translates to: PTALENLGAPTRSMRVSKSGHKR*HTPLNM
Trigger: CATGTTCAATGGAGTGTGTCACCTCTTGTGCCCACT...CTTTGAAACTCTCATGGACCTCGTGGGTGCACCAAGATTTTCCAGTGCCGTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR TCA 90 bp GTGGCTCTCCTAAGAGTTGTTTTGTTGCTCAGTGAAGCTCCTCTCTGCCTTGCTCATTCTTCCTGGAGGTaGGATGGGAGCTTGGGACCT +
Preference number: 4 (lower is better)
Translates to: VALLRVVLLLSEAPLCLAHSSWR*DGSLGP
Trigger: AGGTCCCAAGCTCCCATCTCACCTCCAGGAAGAATG...AGCAAGGCAGAGAGGAGCTTCACTGAGCAACAAAACAACTCTTAGGAGAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549305.1
ENST00000551877.5
CDS-3UTR TCA 90 bp AAATATGTTCATACTAATTGTTGCAGAGGCAGAAGCCAAATATATCTCCTCCTCGGGAGGCGCGGCTGCTaGACGCCCTTGTGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: KYVHTNCCRGRSQIYLLLGRRGC*TPLWVR
Trigger: CCGCACCCACAAGGGCGTTCAGCAGCCGCGCCTCCC...GAGGAGGAGATATATTTGGCTTCTGCCTCTGCAACAATTAGTATGAACATATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547379.6
CDS-3UTR GCA 90 bp CAATTTACCTGCAAGAGGAGGGCCAAGAAGAACTGGGCCACACTCCACAATTGTCAGCCACACGCTTGCTaGTACCACAATAGCCCCACA +
Preference number: 4 (lower is better)
Translates to: QFTCKRRAKKNWATLHNCQPHAC*YHNSPT
Trigger: TGTGGGGCTATTGTGGTAGCAGCAAGCGTGTGGCTG...ACAATTGTGGAGTGTGGCCCAGTTCTTCTTGGCCCTCCTCTTGCAGGTAAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR GCA 90 bp GTGGCTCTCCTAAGAGTTGTTTTGTTGCTCAGTGAAGCTCCTCTCTGCCTTGCTAGTGAAGCTCCTCTCTaGCTTGCTCGCTCTCCGGTT +
Preference number: 4 (lower is better)
Translates to: VALLRVVLLLSEAPLCLASEAPL*LARSPV
Trigger: AACCGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACT...AGCAAGGCAGAGAGGAGCTTCACTGAGCAACAAAACAACTCTTAGGAGAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549305.1
ENST00000551877.5
CDS-3UTR GCA 90 bp GGTGCCATGGAGGGCATGTTGATGGTGGGAGGCAGACAGATTCCTGGGCAGAAACTTCATTCTTCCTCCTaGGTACATAACAGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: GAMEGMLMVGGRQIPGQKLHSSS*VHNSQH
Trigger: ATGCTGGCTGTTATGTACGCAGGAGGAAGAATGAAG...TTTCTGCCCAGGAATCTGTCTGCCTCCCACCATCAACATGCCCTCCATGGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550062.5
CDS-3UTR CCA 90 bp ATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCACCTAGCATTAGGGGCACTTGGCATTGGTaGCATTTCTGCTCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: IHVPCWCAAPTNSSPSIRGTWHW*HFCSSS
Trigger: ACTAGAGGAGCAGAAATGCCACCAATGCCAAGTGCC...CCTAATGCTAGGTGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp TTTTGTTGCTCAGTGAAGCTCCTCTCTGCCTTGCTCGCTCTCCGGTTGTCCATGGGCACTTGGCATTGGTaGCATTTCTGCTCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: FCCSVKLLSALLALRLSMGTWHW*HFCSSS
Trigger: ACTAGAGGAGCAGAAATGCCACCAATGCCAAGTGCC...CATGGACAACCGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549305.1
ENST00000551877.5
CDS-3UTR CCA 90 bp AGAGTTGTTTTGTTGCTCAGTGAAGCTCCTCTCTGCCTTGCTCGCTCTCCGGTTTGGGGCACTTGGCATTaGTGGCATTTCTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RVVLLLSEAPLCLARSPVWGTWH*WHFCSS
Trigger: AGAGGAGCAGAAATGCCACCAATGCCAAGTGCCCCA...AACCGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACAAAACAACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549305.1
ENST00000551877.5
CDS-3UTR CCA 90 bp AGATTCCTGGGCAGAAAGGGGTGGATCCTTGGTGAAACCCCACCTTTAATCCAGTGGGGCACTTGGCATTaGTGGCATTTCTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RFLGRKGWILGETPPLIQWGTWH*WHFCSS
Trigger: AGAGGAGCAGAAATGCCACCAATGCCAAGTGCCCCA...CTGGATTAAAGGTGGGGTTTCACCAAGGATCCACCCCTTTCTGCCCAGGAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550062.5
CDS-3UTR CCA 90 bp TGCAAGCAATCTATAGTTGATAGCATTGCCAATGAGCAGCCACACGCTTGCTGCAGGTGGATGCACAGGTaGGGCACTTGGCATTGGTGG +
Preference number: 4 (lower is better)
Translates to: CKQSIVDSIANEQPHACCRWMHR*GTWHWW
Trigger: CCACCAATGCCAAGTGCCCCACCTGTGCATCCACCT...GCAGCAAGCGTGTGGCTGCTCATTGGCAATGCTATCAACTATAGATTGCTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CCA 90 bp ATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCACCTAGCATTAGGAGGAGGCATTTCCAGTaGTTGAGCACAAGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: IHVPCWCAAPTNSSPSIRRRHFQ*LSTRPV
Trigger: AACAGGCCTTGTGCTCAACCACTGGAAATGCCTCCT...CCTAATGCTAGGTGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp TTCTGGGTAGTCGTGGCTCTCCTAAGAGTTGTTTTGTTGCTCAGTGAAGCTCCTTTCCTGGAGGTGAGATaGGAGCTTGGGACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: FWVVVALLRVVLLLSEAPFLEVR*ELGTSC
Trigger: GCAGGAGGTCCCAAGCTCCCATCTCACCTCCAGGAA...AGGAGCTTCACTGAGCAACAAAACAACTCTTAGGAGAGCCACGACTACCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551877.5
CDS-3UTR CCA 90 bp GGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAACGGAGAAGGAGGCGGTaGCGGGAAGGGGAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: GFRILHITKTESHWKTLKRRRRR*REGEAR
Trigger: CCGCGCCTCCCCTTCCCGCCACCGCCTCCTTCTCCG...TTTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547379.6
CDS-3UTR TCA 90 bp GGGTTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACGTCCAAGGGGTCTCATaGGGGAACCAGCCACACAGG +
Preference number: 4 (lower is better)
Translates to: GFGIQNSPYNQDRKSLEDVQGVS*GNQPHR
Trigger: CCTGTGTGGCTGGTTCCCTCATGAGACCCCTTGGAC...GTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR TCA 90 bp CAAGACAGCATAATAAGCCTCCTGCTATCACCACCGGCCGGCTGCCGTATTTATAGTGGGCACAAGAGGTaGCACACTCCATTGAACATG +
Preference number: 4 (lower is better)
Translates to: QDSIISLLLSPPAGCRIYSGHKR*HTPLNM
Trigger: CATGTTCAATGGAGTGTGTCACCTCTTGTGCCCACT...ATAAATACGGCAGCCGGCCGGTGGTGATAGCAGGAGGCTTATTATGCTGTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR TCA 90 bp AGACAGCATAATAAGCCTCCTGCTATCACCACCGGCCGGCTGCCGTATTTATTCCACCCACGAGGTCCATaGGAGTTTCAAAGAGAACAC +
Preference number: 4 (lower is better)
Translates to: RQHNKPPAITTGRLPYLFHPRGP*EFQREH
Trigger: GTGTTCTCTTTGAAACTCTCATGGACCTCGTGGGTG...GAATAAATACGGCAGCCGGCCGGTGGTGATAGCAGGAGGCTTATTATGCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR TCA 90 bp GGTCTCATGAGGGAACCAGCCACACAGGCATTCAAAAGTAGACTTCCCAAAATCCACACTCCACAATTGTaGCAAGTCCGACGGCACTGG +
Preference number: 4 (lower is better)
Translates to: GLMREPATQAFKSRLPKIHTPQL*QVRRHW
Trigger: CCAGTGCCGTCGGACTTGTCACAATTGTGGAGTGTG...GATTTTGGGAAGTCTACTTTTGAATGCCTGTGTGGCTGGTTCCCTCATGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR TCA 90 bp TGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGGGGTTTGGGATTCAGTTTATTTATGGCCCCTaGCGTGTCCTCGCCCGCCAC +
Preference number: 4 (lower is better)
Translates to: CRIRHPPSTYLNQGFGIQFIYGP*RVLARH
Trigger: GTGGCGGGCGAGGACACGTCAGGGGCCATAAATAAA...CTGAATCCCAAACCCCTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547379.6
ENST00000552432.5
CDS-3UTR TCA 90 bp GGTGCCATGGAGGGCATGTTGATGGTGGGAGGCAGACAGATTCCTGGGCAGAAATCTTTAAAGGGTGAATaGTGCATTCCGCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: GAMEGMLMVGGRQIPGQKSLKGE*CIPLLL
Trigger: AAGGAGAAGCGGAATGCATCATTCACCCTTTAAAGA...TTTCTGCCCAGGAATCTGTCTGCCTCCCACCATCAACATGCCCTCCATGGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550062.5
CDS-3UTR GCA 90 bp ATAGCATTGCCAATGAGCAGCCACACGCTTGCTGCTACCACAATAGCCCCACAGATGGTTAAGGCGGGTTaGAGGTTGAAGGCTAAACCT +
Preference number: 4 (lower is better)
Translates to: IALPMSSHTLAATTIAPQMVKAG*RLKAKP
Trigger: AGGTTTAGCCTTCAACCTGCAACCCGCCTTAACCAT...CTGTGGGGCTATTGTGGTAGCAGCAAGCGTGTGGCTGCTCATTGGCAATGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR GCA 90 bp ATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCACCTAGCATTAGGCATGGCCAATCCATTTaGCATGGGTCGCTTCCTATA +
Preference number: 4 (lower is better)
Translates to: IHVPCWCAAPTNSSPSIRHGQSI*HGSLPI
Trigger: TATAGGAAGCGACCCATGGCAAATGGATTGGCCATG...CCTAATGCTAGGTGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp AGACAGCATAATAAGCCTCCTGCTATCACCACCGGCCGGCTGCCGTATTTATTCACTGGAAAATCTTGGTaGACCCACGAGGTCCATGAG +
Preference number: 4 (lower is better)
Translates to: RQHNKPPAITTGRLPYLFTGKSW*THEVHE
Trigger: CTCATGGACCTCGTGGGTGCACCAAGATTTTCCAGT...GAATAAATACGGCAGCCGGCCGGTGGTGATAGCAGGAGGCTTATTATGCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR GCA 90 bp CTTTGCAAGCAATCTATAGTTGATAGCATTGCCAATGAGCAGCCACACGCTTGCGAGCAGCCACACGCTTaGTGCTACCACAATAGCCCC +
Preference number: 4 (lower is better)
Translates to: LCKQSIVDSIANEQPHACEQPHA*CYHNSP
Trigger: GGGGCTATTGTGGTAGCAGCAAGCGTGTGGCTGCTC...GCAAGCGTGTGGCTGCTCATTGGCAATGCTATCAACTATAGATTGCTTGCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR GCA 90 bp ATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCACCTAGCATTAGGGAACTGTGTGTTCTGTaGTCTGGCGTTCTACTTCAG +
Preference number: 4 (lower is better)
Translates to: IHVPCWCAAPTNSSPSIRELCVL*SGVLLQ
Trigger: CTGAAGTAGAACGCCAGAGCACAGAACACACAGTTC...CCTAATGCTAGGTGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp TCCCAGATTCATCAGAGGAGTCATTATGTACGGCAGCTAGGCATGATCCTGATTAGGTGGATGCACAGGTaGGGCACTTGGCATTGGTGG +
Preference number: 4 (lower is better)
Translates to: SQIHQRSHYVRQLGMILIRWMHR*GTWHWW
Trigger: CCACCAATGCCAAGTGCCCCACCTGTGCATCCACCT...AATCAGGATCATGCCTAGCTGCCGTACATAATGACTCCTCTGATGAATCTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546459.5
CDS-3UTR CCA 90 bp CTCCTTTTCCCAGATTCATCAGAGGAGTCATTATGTACGGCAGCTAGGCATGATTCCTCCATCTGGAGGTaGATGCACAGGTGGGGCACT +
Preference number: 4 (lower is better)
Translates to: LLFPDSSEESLCTAARHDSSIWR*MHRWGT
Trigger: AGTGCCCCACCTGTGCATCCACCTCCAGATGGAGGA...ATCATGCCTAGCTGCCGTACATAATGACTCCTCTGATGAATCTGGGAAAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546459.5
CDS-3UTR CCA 90 bp CCAAAACACTACTTACAGGACTTCACTGAAGTCCTGAGCCTCTTAAAGTCACCCTCCTCCATCTGGAGGTaGATGCACAGGTGGGGCACT +
Preference number: 4 (lower is better)
Translates to: PKHYLQDFTEVLSLLKSPSSIWR*MHRWGT
Trigger: AGTGCCCCACCTGTGCATCCACCTCCAGATGGAGGA...GGGTGACTTTAAGAGGCTCAGGACTTCAGTGAAGTCCTGTAAGTAGTGTTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549033.5
CDS-3UTR CCA 90 bp TTCCATCTCCTTTTCCCAGATTCATCAGAGGAGTCATTATGTACGGCAGCTAGGACCCCATCCTCCATCTaGAGGTGGATGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: FHLLFPDSSEESLCTAARTPSSI*RWMHRW
Trigger: CCACCTGTGCATCCACCTCCAGATGGAGGATGGGGT...CCTAGCTGCCGTACATAATGACTCCTCTGATGAATCTGGGAAAAGGAGATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546459.5
CDS-3UTR CCA 90 bp CAATTTACCTGCAAGAGGAGGGCCAAGAAGAACTGGGCCACACTCCACAATTGTCAGGACTTCCTGCCATaGCCAATCCATTTGCCATGG +
Preference number: 4 (lower is better)
Translates to: QFTCKRRAKKNWATLHNCQDFLP*PIHLPW
Trigger: CCATGGCAAATGGATTGGCCATGGCAGGAAGTCCTG...ACAATTGTGGAGTGTGGCCCAGTTCTTCTTGGCCCTCCTCTTGCAGGTAAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CCA 90 bp GTAATGAATCCCATAGTGAGGTACAGCTGTACCACGCTGCTACTAAAGGAGGCCGGCACTGGAAAATCTTaGTGCACCCACGAGGTCCAT +
Preference number: 4 (lower is better)
Translates to: VMNPIVRYSCTTLLLKEAGTGKS*CTHEVH
Trigger: ATGGACCTCGTGGGTGCACCAAGATTTTCCAGTGCC...GGCCTCCTTTAGTAGCAGCGTGGTACAGCTGTACCTCACTATGGGATTCATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR CAA 72 bp TTCTGGGTAGTCGTGGCTCTCCTAAGAGTTGTTTTGTaGCTCAGTGAAGCTCCTCTCTGCCTTGCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: FWVVVALLRVVL*LSEAPLCLARS
Trigger: AGAGCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACAAAACAACTCTTAGGAGAGCCACGACTACCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551877.5
CDS-3UTR TCA 90 bp TTCCATCTCCTTTTCCCAGATTCATCAGAGGAGTCATTATGTACGGCAGCTAGGACTCCTCTCCCCACCTaGGGCAGAAGTTTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: FHLLFPDSSEESLCTAARTPLPT*GRSFLV
Trigger: CACAAGGAAACTTCTGCCTCAGGTGGGGAGAGGAGT...CCTAGCTGCCGTACATAATGACTCCTCTGATGAATCTGGGAAAAGGAGATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546459.5
CDS-3UTR TCA 90 bp CTAGCAAACATATCAACGAAAGCCATAACAGATAGCAGAAAAGCTGCCGAGTACGTCCAAGGGGTCTCATaGGGGAACCAGCCACACAGG +
Preference number: 4 (lower is better)
Translates to: LANISTKAITDSRKAAEYVQGVS*GNQPHR
Trigger: CCTGTGTGGCTGGTTCCCTCATGAGACCCCTTGGAC...GTACTCGGCAGCTTTTCTGCTATCTGTTATGGCTTTCGTTGATATGTTTGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR TCA 90 bp GTAATGAATCCCATAGTGAGGTACAGCTGTACCACGCTGCTACTAAAGGAGGCCCACCCACGAGGTCCATaGGAGTTTCAAAGAGAACAC +
Preference number: 4 (lower is better)
Translates to: VMNPIVRYSCTTLLLKEAHPRGP*EFQREH
Trigger: GTGTTCTCTTTGAAACTCTCATGGACCTCGTGGGTG...GGCCTCCTTTAGTAGCAGCGTGGTACAGCTGTACCTCACTATGGGATTCATTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR TCA 90 bp GGGTTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACCCTGGAGAAGGCCACTaGAATGCACCCAGGAGGATG +
Preference number: 4 (lower is better)
Translates to: GFGIQNSPYNQDRKSLEDPGEGH*NAPRRM
Trigger: CATCCTCCTGGGTGCATTTCAGTGGCCTTCTCCAGG...GTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp ATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCACCTAGCATTAGGAGGCCAATGAGTCCATaGGCTAAAGGGTTGAAACTT +
Preference number: 4 (lower is better)
Translates to: IHVPCWCAAPTNSSPSIRRPMSP*AKGLKL
Trigger: AAGTTTCAACCCTTTAGCTCATGGACTCATTGGCCT...CCTAATGCTAGGTGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp TGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGGGGTTTGGGATTCAGACTCACTGCAACTACTaGGGCCTGCCTCCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: CRIRHPPSTYLNQGFGIQTHCNY*GLPPVR
Trigger: TCTGACAGGAGGCAGGCCTCAGTAGTTGCAGTGAGT...CTGAATCCCAAACCCCTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp GGGTTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACGAGCAGCCACACGCTTaGTGCTACCACAATAGCCCC +
Preference number: 4 (lower is better)
Translates to: GFGIQNSPYNQDRKSLEDEQPHA*CYHNSP
Trigger: GGGGCTATTGTGGTAGCAGCAAGCGTGTGGCTGCTC...GTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp TGTTGCTCAGTGAAGCTCCTCTCTGCCTTGCTCGCTCTCCGGTTGTCCATGTGCGAAATTCAAGTAACCTaGCGACAGGTGTTTAGAAAC +
Preference number: 4 (lower is better)
Translates to: CCSVKLLSALLALRLSMCEIQVT*RQVFRN
Trigger: GTTTCTAAACACCTGTCGCCAGGTTACTTGAATTTC...GCACATGGACAACCGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549305.1
ENST00000551877.5
CDS-3UTR CCA 90 bp GGTCTCATGAGGGAACCAGCCACACAGGCATTCAAAAGTAGACTTCCCAAAATCTGGGGCACTTGGCATTaGTGGCATTTCTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GLMREPATQAFKSRLPKIWGTWH*WHFCSS
Trigger: AGAGGAGCAGAAATGCCACCAATGCCAAGTGCCCCA...GATTTTGGGAAGTCTACTTTTGAATGCCTGTGTGGCTGGTTCCCTCATGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CCA 90 bp CATCTCCTTTTCCCAGATTCATCAGAGGAGTCATTATGTACGGCAGCTAGGCATCACAGGTGGGGCACTTaGCATTGGTGGCATTTCTGC +
Preference number: 4 (lower is better)
Translates to: HLLFPDSSEESLCTAARHHRWGT*HWWHFC
Trigger: GCAGAAATGCCACCAATGCCAAGTGCCCCACCTGTG...ATGCCTAGCTGCCGTACATAATGACTCCTCTGATGAATCTGGGAAAAGGAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546459.5
CDS-3UTR CCA 90 bp TGTCAGTTCTGGGTAGTCGTGGCTCTCCTAAGAGTTGTTTTGTTGCTCAGTGAACACAGGTGGGGCACTTaGCATTGGTGGCATTTCTGC +
Preference number: 4 (lower is better)
Translates to: CQFWVVVALLRVVLLLSEHRWGT*HWWHFC
Trigger: GCAGAAATGCCACCAATGCCAAGTGCCCCACCTGTG...TTCACTGAGCAACAAAACAACTCTTAGGAGAGCCACGACTACCCAGAACTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551877.5
CDS-3UTR CCA 90 bp GGGTTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACAGGTGGATGCACAGGTaGGGCACTTGGCATTGGTGG +
Preference number: 4 (lower is better)
Translates to: GFGIQNSPYNQDRKSLEDRWMHR*GTWHWW
Trigger: CCACCAATGCCAAGTGCCCCACCTGTGCATCCACCT...GTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp AAACCTGTAATGAATCCCATAGTGAGGTACAGCTGTACCACGCTGCTACTAAAGTCCTCCATCTGGAGGTaGATGCACAGGTGGGGCACT +
Preference number: 4 (lower is better)
Translates to: KPVMNPIVRYSCTTLLLKSSIWR*MHRWGT
Trigger: AGTGCCCCACCTGTGCATCCACCTCCAGATGGAGGA...CTTTAGTAGCAGCGTGGTACAGCTGTACCTCACTATGGGATTCATTACAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CCA 90 bp GGGTTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTCCTCCATCTGGAGGTaGATGCACAGGTGGGGCACT +
Preference number: 4 (lower is better)
Translates to: GFGIQNSPYNQDRKSLEDSSIWR*MHRWGT
Trigger: AGTGCCCCACCTGTGCATCCACCTCCAGATGGAGGA...GTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp CCGACGGCACTGGAAAATCTTGGTGCACCCACGAGGTCCATGAGAGTTTCAAAGCCAATCCATTTGCCATaGGTCGCTTCCTATAGAAGT +
Preference number: 4 (lower is better)
Translates to: PTALENLGAPTRSMRVSKPIHLP*VASYRS
Trigger: ACTTCTATAGGAAGCGACCCATGGCAAATGGATTGG...CTTTGAAACTCTCATGGACCTCGTGGGTGCACCAAGATTTTCCAGTGCCGTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CCA 90 bp GGTCTCATGAGGGAACCAGCCACACAGGCATTCAAAAGTAGACTTCCCAAAATCCAAGTCCGACGGCACTaGAAAATCTTGGTGCACCCA +
Preference number: 4 (lower is better)
Translates to: GLMREPATQAFKSRLPKIQVRRH*KILVHP
Trigger: TGGGTGCACCAAGATTTTCCAGTGCCGTCGGACTTG...GATTTTGGGAAGTCTACTTTTGAATGCCTGTGTGGCTGGTTCCCTCATGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CCA 90 bp ATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCACCTAGCATTAGGCCTCGGGGATCTTTCTaGTTACGTAAACCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: IHVPCWCAAPTNSSPSIRPRGSF*LRKPEF
Trigger: AAACTCAGGTTTACGTAACCAGAAAGATCCCCGAGG...CCTAATGCTAGGTGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp GGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAAGTCTCTGGCGCAGGGTaGGCGCTGCAGCCCTCCGTT +
Preference number: 4 (lower is better)
Translates to: GFRILHITKTESHWKTLKVSGAG*ALQPSV
Trigger: AACGGAGGGCTGCAGCGCCCACCCTGCGCCAGAGAC...TTTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp TTCCAATTGTGTTCTTTAGACAGCGATCCCATAATAACACGTCAATCAACTGATGTCTCTGGCGCAGGGTaGGCGCTGCAGCCCTCCGTT +
Preference number: 4 (lower is better)
Translates to: FQLCSLDSDPIITRQSTDVSGAG*ALQPSV
Trigger: AACGGAGGGCTGCAGCGCCCACCCTGCGCCAGAGAC...ATCAGTTGATTGACGTGTTATTATGGGATCGCTGTCTAAAGAACACAATTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549465.5
CDS-3UTR CCA 90 bp GGGTTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTCTTTATCTGGTCTCTaGCGCAGGGTGGGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: GFGIQNSPYNQDRKSLEDSLSGL*RRVGAA
Trigger: TGCAGCGCCCACCCTGCGCCAGAGACCAGATAAAGA...GTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547379.6
ENST00000552432.5
CDS-3UTR TCA 90 bp CTCCTAAGAGTTGTTTTGTTGCTCAGTGAAGCTCCTCTCTGCCTTGCTCGCTCTAGACATAAGTTTCCCTaGTCTATGGACTCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: LLRVVLLLSEAPLCLARSRHKFP*SMDSSP
Trigger: GGGAGAGGAGTCCATAGATCAGGGAAACTTATGTCT...AGAGCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACAAAACAACTCTTAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549305.1
ENST00000551877.5
CDS-3UTR TCA 90 bp GATGGTGGGAGGCAGACAGATTCCTGGGCAGAAAGGGGTGGATCCTTGGTGAAAAGCCAGCATAATGGATaGAATCCATGCTATTTCACT +
Preference number: 4 (lower is better)
Translates to: DGGRQTDSWAERGGSLVKSQHNG*NPCYFT
Trigger: AGTGAAATAGCATGGATTTCATCCATTATGCTGGCT...TTTCACCAAGGATCCACCCCTTTCTGCCCAGGAATCTGTCTGCCTCCCACCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550062.5
CDS-3UTR TCA 90 bp TCTATAGTTGATAGCATTGCCAATGAGCAGCCACACGCTTGCTGCTACCACAATAGGCGGGTTGCAGGTTaGAGGCTAAACCTAAACCTG +
Preference number: 4 (lower is better)
Translates to: SIVDSIANEQPHACCYHNRRVAG*RLNLNL
Trigger: CAGGTTTAGGTTTAGCCTTCAACCTGCAACCCGCCT...ATTGTGGTAGCAGCAAGCGTGTGGCTGCTCATTGGCAATGCTATCAACTATAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR TCA 90 bp CCGACGGCACTGGAAAATCTTGGTGCACCCACGAGGTCCATGAGAGTTTCAAAGGATCTCTTTAAAGGGTaGATGATGCATTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: PTALENLGAPTRSMRVSKDLFKG*MMHSAS
Trigger: AGAAGCGGAATGCATCATTCACCCTTTAAAGAGATC...CTTTGAAACTCTCATGGACCTCGTGGGTGCACCAAGATTTTCCAGTGCCGTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549928.5
CDS-3UTR TCA 90 bp CTGGGCAGAAAGGGGTGGATCCTTGGTGAAACCCCACCTTTAATCCAGAGACAGGATCTCTTTAAAGGGTaGATGATGCATTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: LGRKGWILGETPPLIQRQDLFKG*MMHSAS
Trigger: AGAAGCGGAATGCATCATTCACCCTTTAAAGAGATC...CTGTCTCTGGATTAAAGGTGGGGTTTCACCAAGGATCCACCCCTTTCTGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550062.5
CDS-3UTR TCA 90 bp CTGGGCAGAAAGGGGTGGATCCTTGGTGAAACCCCACCTTTAATCCAGAGACAGGAAATTCAAGTAACCTaGGGCAGAAGTTTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: LGRKGWILGETPPLIQRQEIQVT*GRSFLV
Trigger: CACAAGGAAACTTCTGCCTCAGGTTACTTGAATTTC...CTGTCTCTGGATTAAAGGTGGGGTTTCACCAAGGATCCACCCCTTTCTGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550062.5
CDS-3UTR GCA 90 bp GTTGTTTTGTTGCTCAGTGAAGCTCCTCTCTGCCTTGCTCGCTCTCCGGTTGTCAATGGAGATAAAAGCTaGTCCAACCACAATCCAACC +
Preference number: 4 (lower is better)
Translates to: VVLLLSEAPLCLARSPVVNGDKS*SNHNPT
Trigger: GGTTGGATTGTGGTTGGAGCAGCTTTTATCTCCATT...GACAACCGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACAAAACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549305.1
ENST00000551877.5
CDS-3UTR GCA 90 bp GGTCTCATGAGGGAACCAGCCACACAGGCATTCAAAAGTAGACTTCCCAAAATCTCACCACCGGCCGGCTaGCGTATTTATTCACCAAAA +
Preference number: 4 (lower is better)
Translates to: GLMREPATQAFKSRLPKISPPAG*RIYSPK
Trigger: TTTTGGTGAATAAATACGGCAGCCGGCCGGTGGTGA...GATTTTGGGAAGTCTACTTTTGAATGCCTGTGTGGCTGGTTCCCTCATGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR GCA 90 bp GTAATGAATCCCATAGTGAGGTACAGCTGTACCACGCTGCTACTAAAGGAGGCCCATGGCCAATCCATTTaGCATGGGTCGCTTCCTATA +
Preference number: 4 (lower is better)
Translates to: VMNPIVRYSCTTLLLKEAHGQSI*HGSLPI
Trigger: TATAGGAAGCGACCCATGGCAAATGGATTGGCCATG...GGCCTCCTTTAGTAGCAGCGTGGTACAGCTGTACCTCACTATGGGATTCATTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR GCA 90 bp GTAATGAATCCCATAGTGAGGTACAGCTGTACCACGCTGCTACTAAAGGAGGCCGAAAACAGGACTTCCTaGCATGGCCAATCCATTTGC +
Preference number: 4 (lower is better)
Translates to: VMNPIVRYSCTTLLLKEAENRTS*HGQSIC
Trigger: GCAAATGGATTGGCCATGGCAGGAAGTCCTGTTTTC...GGCCTCCTTTAGTAGCAGCGTGGTACAGCTGTACCTCACTATGGGATTCATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR GCA 90 bp GGGTTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACGCTTGTGTAGTCCTGTaGCAGTGGGCACAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: GFGIQNSPYNQDRKSLEDACVVL*QWAQEV
Trigger: CACCTCTTGTGCCCACTGGCACAGGACTACACAAGC...GTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR GCA 90 bp GGGTTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACCAGCCACACGCTTGCTaGTACCACAATAGCCCCACA +
Preference number: 4 (lower is better)
Translates to: GFGIQNSPYNQDRKSLEDQPHAC*YHNSPT
Trigger: TGTGGGGCTATTGTGGTAGCAGCAAGCGTGTGGCTG...GTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp CAGTTCTGGGTAGTCGTGGCTCTCCTAAGAGTTGTTTTGTTGCTCAGTGAAGCTGGCACTTGGCATTGGTaGCATTTCTGCTCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: QFWVVVALLRVVLLLSEAGTWHW*HFCSSS
Trigger: ACTAGAGGAGCAGAAATGCCACCAATGCCAAGTGCC...AGCTTCACTGAGCAACAAAACAACTCTTAGGAGAGCCACGACTACCCAGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551877.5
CDS-3UTR CCA 90 bp TCCTTTTCCCAGATTCATCAGAGGAGTCATTATGTACGGCAGCTAGGCATGATCTGGGGCACTTGGCATTaGTGGCATTTCTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SFSQIHQRSHYVRQLGMIWGTWH*WHFCSS
Trigger: AGAGGAGCAGAAATGCCACCAATGCCAAGTGCCCCA...GATCATGCCTAGCTGCCGTACATAATGACTCCTCTGATGAATCTGGGAAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546459.5
CDS-3UTR CCA 90 bp CTAGCAAACATATCAACGAAAGCCATAACAGATAGCAGAAAAGCTGCCGAGTACACCCCATCCTCCATCTaGAGGTGGATGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: LANISTKAITDSRKAAEYTPSSI*RWMHRW
Trigger: CCACCTGTGCATCCACCTCCAGATGGAGGATGGGGT...GTACTCGGCAGCTTTTCTGCTATCTGTTATGGCTTTCGTTGATATGTTTGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CCA 90 bp CCGACGGCACTGGAAAATCTTGGTGCACCCACGAGGTCCATGAGAGTTTCAAAGAGTATTTGCCAATTATaGTTAAGGCGGGTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PTALENLGAPTRSMRVSKSICQL*LRRVAG
Trigger: ACCTGCAACCCGCCTTAACCATAATTGGCAAATACT...CTTTGAAACTCTCATGGACCTCGTGGGTGCACCAAGATTTTCCAGTGCCGTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CCA 90 bp ATAGCATTGCCAATGAGCAGCCACACGCTTGCTGCTACCACAATAGCCCCACAGAGTATTTGCCAATTATaGTTAAGGCGGGTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: IALPMSSHTLAATTIAPQSICQL*LRRVAG
Trigger: ACCTGCAACCCGCCTTAACCATAATTGGCAAATACT...CTGTGGGGCTATTGTGGTAGCAGCAAGCGTGTGGCTGCTCATTGGCAATGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CCA 90 bp TGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGGGGTTTGGGATTCAGCAGGACTTCCTGCCATaGCCAATCCATTTGCCATGG +
Preference number: 4 (lower is better)
Translates to: CRIRHPPSTYLNQGFGIQQDFLP*PIHLPW
Trigger: CCATGGCAAATGGATTGGCCATGGCAGGAAGTCCTG...CTGAATCCCAAACCCCTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp GGGTTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACGTAGTCCTGTGCCAGTaGGCACAAGAGGTGACACAC +
Preference number: 4 (lower is better)
Translates to: GFGIQNSPYNQDRKSLEDVVLCQ*AQEVTH
Trigger: GTGTGTCACCTCTTGTGCCCACTGGCACAGGACTAC...GTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp AAGGCTAAACCTAAACCTGTAATGAATCCCATAGTGAGGTACAGCTGTACCACGGTAGTCCTGTGCCAGTaGGCACAAGAGGTGACACAC +
Preference number: 4 (lower is better)
Translates to: KAKPKPVMNPIVRYSCTTVVLCQ*AQEVTH
Trigger: GTGTGTCACCTCTTGTGCCCACTGGCACAGGACTAC...CGTGGTACAGCTGTACCTCACTATGGGATTCATTACAGGTTTAGGTTTAGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CCA 90 bp ATTTTTAGACTTAGAAGTGGTTTGATTGGGTCCAAGGGGTCTCATGAGGGAACCGTAGTCCTGTGCCAGTaGGCACAAGAGGTGACACAC +
Preference number: 4 (lower is better)
Translates to: IFRLRSGLIGSKGSHEGTVVLCQ*AQEVTH
Trigger: GTGTGTCACCTCTTGTGCCCACTGGCACAGGACTAC...GGTTCCCTCATGAGACCCCTTGGACCCAATCAAACCACTTCTAAGTCTAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CCA 90 bp TGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGGGGTTTGGGATTCAGCAAGTCCGACGGCACTaGAAAATCTTGGTGCACCCA +
Preference number: 4 (lower is better)
Translates to: CRIRHPPSTYLNQGFGIQQVRRH*KILVHP
Trigger: TGGGTGCACCAAGATTTTCCAGTGCCGTCGGACTTG...CTGAATCCCAAACCCCTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp CCGACGGCACTGGAAAATCTTGGTGCACCCACGAGGTCCATGAGAGTTTCAAAGAGGGTTCAGATTCTCTaGTCTTCTGCCTTGCATTTT +
Preference number: 4 (lower is better)
Translates to: PTALENLGAPTRSMRVSKRVQIL*SSALHF
Trigger: AAAATGCAAGGCAGAAGACCAGAGAATCTGAACCCT...CTTTGAAACTCTCATGGACCTCGTGGGTGCACCAAGATTTTCCAGTGCCGTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CCA 90 bp ATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCACCTAGCATTAGGGAGTACAGAGGAACATaGACAGGGTTAAACTGCATA +
Preference number: 4 (lower is better)
Translates to: IHVPCWCAAPTNSSPSIREYRGT*TGLNCI
Trigger: TATGCAGTTTAACCCTGTCCATGTTCCTCTGTACTC...CCTAATGCTAGGTGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp ATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCACCTAGCATTAGGAGCCAGCATAATGGATaGAATCCATGCTATTTCACT +
Preference number: 4 (lower is better)
Translates to: IHVPCWCAAPTNSSPSIRSQHNG*NPCYFT
Trigger: AGTGAAATAGCATGGATTTCATCCATTATGCTGGCT...CCTAATGCTAGGTGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp AAGGCTAAACCTAAACCTGTAATGAATCCCATAGTGAGGTACAGCTGTACCACGAGGCGGGTTGCAGGTTaGAGGCTAAACCTAAACCTG +
Preference number: 4 (lower is better)
Translates to: KAKPKPVMNPIVRYSCTTRRVAG*RLNLNL
Trigger: CAGGTTTAGGTTTAGCCTTCAACCTGCAACCCGCCT...CGTGGTACAGCTGTACCTCACTATGGGATTCATTACAGGTTTAGGTTTAGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR TCA 90 bp AATGAAATGTATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACGTCCAAGGGGTCTCATaGGGGAACCAGCCACACAGG +
Preference number: 4 (lower is better)
Translates to: NEMYKGSLCRIRHPPSTYVQGVS*GNQPHR
Trigger: CCTGTGTGGCTGGTTCCCTCATGAGACCCCTTGGAC...GTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATACATTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR TCA 90 bp TGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGGGGTTTGGGATTCAGAGTGGGCACAAGAGGTaGCACACTCCATTGAACATG +
Preference number: 4 (lower is better)
Translates to: CRIRHPPSTYLNQGFGIQSGHKR*HTPLNM
Trigger: CATGTTCAATGGAGTGTGTCACCTCTTGTGCCCACT...CTGAATCCCAAACCCCTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR TCA 90 bp ATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCACCTAGCATTAGGAAAATGGGAAAGTGCTaGATTAAACTGGGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: IHVPCWCAAPTNSSPSIRKMGKC*IKLGCN
Trigger: ATTGCAGCCCAGTTTAATTCAGCACTTTCCCATTTT...CCTAATGCTAGGTGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp GCTCTCCTAAGAGTTGTTTTGTTGCTCAGTGAAGCTCCTCTCTGCCTTGCTCGCTCTTTAAAGGGTGAATaGTGCATTCCGCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: ALLRVVLLLSEAPLCLARSLKGE*CIPLLL
Trigger: AAGGAGAAGCGGAATGCATCATTCACCCTTTAAAGA...GCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACAAAACAACTCTTAGGAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549305.1
CDS-3UTR TCA 90 bp CAAGACAGCATAATAAGCCTCCTGCTATCACCACCGGCCGGCTGCCGTATTTATTCTTTAAAGGGTGAATaGTGCATTCCGCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: QDSIISLLLSPPAGCRIYSLKGE*CIPLLL
Trigger: AAGGAGAAGCGGAATGCATCATTCACCCTTTAAAGA...ATAAATACGGCAGCCGGCCGGTGGTGATAGCAGGAGGCTTATTATGCTGTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549928.5
CDS-3UTR TCA 90 bp CTAAGAGTTGTTTTGTTGCTCAGTGAAGCTCCTCTCTGCCTTGCTCGCTCTCCGGATCTCTTTAAAGGGTaGATGATGCATTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: LRVVLLLSEAPLCLARSPDLFKG*MMHSAS
Trigger: AGAAGCGGAATGCATCATTCACCCTTTAAAGAGATC...CGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACAAAACAACTCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549305.1
CDS-3UTR GCA 90 bp AGATTCCTGGGCAGAAAGGGGTGGATCCTTGGTGAAACCCCACCTTTAATCCAGAATGGAGATAAAAGCTaGTCCAACCACAATCCAACC +
Preference number: 4 (lower is better)
Translates to: RFLGRKGWILGETPPLIQNGDKS*SNHNPT
Trigger: GGTTGGATTGTGGTTGGAGCAGCTTTTATCTCCATT...CTGGATTAAAGGTGGGGTTTCACCAAGGATCCACCCCTTTCTGCCCAGGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550062.5
CDS-3UTR GCA 90 bp TGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGGGGTTTGGGATTCAGACTGGAAAATCTTGGTaGACCCACGAGGTCCATGAG +
Preference number: 4 (lower is better)
Translates to: CRIRHPPSTYLNQGFGIQTGKSW*THEVHE
Trigger: CTCATGGACCTCGTGGGTGCACCAAGATTTTCCAGT...CTGAATCCCAAACCCCTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR GCA 90 bp TGCAAGCAATCTATAGTTGATAGCATTGCCAATGAGCAGCCACACGCTTGCTGCATCCACCAATTTACCTaGAAGAGGAGGGCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: CKQSIVDSIANEQPHACCIHQFT*KRRAKK
Trigger: CTTCTTGGCCCTCCTCTTGCAGGTAAATTGGTGGAT...GCAGCAAGCGTGTGGCTGCTCATTGGCAATGCTATCAACTATAGATTGCTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR GCA 90 bp TATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGGAGCAGCCACACGCTTaGTGCTACCACAATAGCCCC +
Preference number: 4 (lower is better)
Translates to: YKGSLCRIRHPPSTYLNQEQPHA*CYHNSP
Trigger: GGGGCTATTGTGGTAGCAGCAAGCGTGTGGCTGCTC...CTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp TTGTTGCTCAGTGAAGCTCCTCTCTGCCTTGCTCGCTCTCCGGTTGTCCATGTGAGGTGTTTAGAAACATaGTCTTCCATTTCACCAAGA +
Preference number: 4 (lower is better)
Translates to: LLLSEAPLCLARSPVVHVRCLET*SSISPR
Trigger: TCTTGGTGAAATGGAAGACCATGTTTCTAAACACCT...CACATGGACAACCGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549305.1
ENST00000551877.5
CDS-3UTR CCA 90 bp GTTGTTTTGTTGCTCAGTGAAGCTCCTCTCTGCCTTGCTCGCTCTCCGGTTGTCGAAATTCAAGTAACCTaGCGACAGGTGTTTAGAAAC +
Preference number: 4 (lower is better)
Translates to: VVLLLSEAPLCLARSPVVEIQVT*RQVFRN
Trigger: GTTTCTAAACACCTGTCGCCAGGTTACTTGAATTTC...GACAACCGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACAAAACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549305.1
ENST00000551877.5
CDS-3UTR CCA 90 bp ATAGCATTGCCAATGAGCAGCCACACGCTTGCTGCTACCACAATAGCCCCACAGGAAATTCAAGTAACCTaGCGACAGGTGTTTAGAAAC +
Preference number: 4 (lower is better)
Translates to: IALPMSSHTLAATTIAPQEIQVT*RQVFRN
Trigger: GTTTCTAAACACCTGTCGCCAGGTTACTTGAATTTC...CTGTGGGGCTATTGTGGTAGCAGCAAGCGTGTGGCTGCTCATTGGCAATGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CCA 90 bp CATCTCCTTTTCCCAGATTCATCAGAGGAGTCATTATGTACGGCAGCTAGGCATGGCACTTGGCATTGGTaGCATTTCTGCTCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: HLLFPDSSEESLCTAARHGTWHW*HFCSSS
Trigger: ACTAGAGGAGCAGAAATGCCACCAATGCCAAGTGCC...ATGCCTAGCTGCCGTACATAATGACTCCTCTGATGAATCTGGGAAAAGGAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546459.5
CDS-3UTR CCA 90 bp CTAGCAAACATATCAACGAAAGCCATAACAGATAGCAGAAAAGCTGCCGAGTACCACAGGTGGGGCACTTaGCATTGGTGGCATTTCTGC +
Preference number: 4 (lower is better)
Translates to: LANISTKAITDSRKAAEYHRWGT*HWWHFC
Trigger: GCAGAAATGCCACCAATGCCAAGTGCCCCACCTGTG...GTACTCGGCAGCTTTTCTGCTATCTGTTATGGCTTTCGTTGATATGTTTGCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CCA 90 bp TATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGACCCCATCCTCCATCTaGAGGTGGATGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: YKGSLCRIRHPPSTYLNQTPSSI*RWMHRW
Trigger: CCACCTGTGCATCCACCTCCAGATGGAGGATGGGGT...CTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp GGGTTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACCAAGTCCGACGGCACTaGAAAATCTTGGTGCACCCA +
Preference number: 4 (lower is better)
Translates to: GFGIQNSPYNQDRKSLEDQVRRH*KILVHP
Trigger: TGGGTGCACCAAGATTTTCCAGTGCCGTCGGACTTG...GTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp ATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCACCTAGCATTAGGCTTAAACCAGGGGTTTaGGATTCAGAATTCTCCATA +
Preference number: 4 (lower is better)
Translates to: IHVPCWCAAPTNSSPSIRLKPGV*DSEFSI
Trigger: TATGGAGAATTCTGAATCCCAAACCCCTGGTTTAAG...CCTAATGCTAGGTGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp AGATTCCTGGGCAGAAAGGGGTGGATCCTTGGTGAAACCCCACCTTTAATCCAGGCAGAAGTTTCCTTGTaGACCATTGCTCTTTTTAGA +
Preference number: 4 (lower is better)
Translates to: RFLGRKGWILGETPPLIQAEVSL*TIALFR
Trigger: TCTAAAAAGAGCAATGGTTCACAAGGAAACTTCTGC...CTGGATTAAAGGTGGGGTTTCACCAAGGATCCACCCCTTTCTGCCCAGGAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550062.5
CDS-3UTR TCA 90 bp TCCTTTTCCCAGATTCATCAGAGGAGTCATTATGTACGGCAGCTAGGCATGATCAGACATAAGTTTCCCTaGTCTATGGACTCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: SFSQIHQRSHYVRQLGMIRHKFP*SMDSSP
Trigger: GGGAGAGGAGTCCATAGATCAGGGAAACTTATGTCT...GATCATGCCTAGCTGCCGTACATAATGACTCCTCTGATGAATCTGGGAAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546459.5
CDS-3UTR TCA 90 bp TGTCAGTTCTGGGTAGTCGTGGCTCTCCTAAGAGTTGTTTTGTTGCTCAGTGAAAGACATAAGTTTCCCTaGTCTATGGACTCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: CQFWVVVALLRVVLLLSERHKFP*SMDSSP
Trigger: GGGAGAGGAGTCCATAGATCAGGGAAACTTATGTCT...TTCACTGAGCAACAAAACAACTCTTAGGAGAGCCACGACTACCCAGAACTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551877.5
CDS-3UTR TCA 90 bp AGACAGCATAATAAGCCTCCTGCTATCACCACCGGCCGGCTGCCGTATTTATTCAGCCAGCATAATGGATaGAATCCATGCTATTTCACT +
Preference number: 4 (lower is better)
Translates to: RQHNKPPAITTGRLPYLFSQHNG*NPCYFT
Trigger: AGTGAAATAGCATGGATTTCATCCATTATGCTGGCT...GAATAAATACGGCAGCCGGCCGGTGGTGATAGCAGGAGGCTTATTATGCTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR TCA 90 bp CTAAGAGTTGTTTTGTTGCTCAGTGAAGCTCCTCTCTGCCTTGCTCGCTCTCCGAGCCAGCATAATGGATaGAATCCATGCTATTTCACT +
Preference number: 4 (lower is better)
Translates to: LRVVLLLSEAPLCLARSPSQHNG*NPCYFT
Trigger: AGTGAAATAGCATGGATTTCATCCATTATGCTGGCT...CGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACAAAACAACTCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549305.1
ENST00000551877.5
CDS-3UTR TCA 90 bp GGGTTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACGACTTAGAAGTGGTTTaGTTGGGTCCAAGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: GFGIQNSPYNQDRKSLEDDLEVV*LGPRGL
Trigger: GAGACCCCTTGGACCCAATCAAACCACTTCTAAGTC...GTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR TCA 90 bp TATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGCACACTCCACAATTGTaGCAAGTCCGACGGCACTGG +
Preference number: 4 (lower is better)
Translates to: YKGSLCRIRHPPSTYLNQHTPQL*QVRRHW
Trigger: CCAGTGCCGTCGGACTTGTCACAATTGTGGAGTGTG...CTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR TCA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACACTTCCTGGGCTCAAATaGCCCTCTCGTCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTLPGLK*PSRLSL
Trigger: GAGGCTGAGACGAGAGGGTCATTTGAGCCCAGGAAG...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp TATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGACTCACTGCAACTACTaGGGCCTGCCTCCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: YKGSLCRIRHPPSTYLNQTHCNY*GLPPVR
Trigger: TCTGACAGGAGGCAGGCCTCAGTAGTTGCAGTGAGT...CTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp CAAGACAGCATAATAAGCCTCCTGCTATCACCACCGGCCGGCTGCCGTATTTATTTAATGTTGGTATTTTaGCCTCCTCCCATAACAGTG +
Preference number: 4 (lower is better)
Translates to: QDSIISLLLSPPAGCRIYLMLVF*PPPITV
Trigger: CACTGTTATGGGAGGAGGTCAAAATACCAACATTAA...ATAAATACGGCAGCCGGCCGGTGGTGATAGCAGGAGGCTTATTATGCTGTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549033.5
CDS-3UTR TCA 90 bp AGACAGCATAATAAGCCTCCTGCTATCACCACCGGCCGGCTGCCGTATTTATTCGTCACCCATGAGGATTaGAATAAACTTCTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: RQHNKPPAITTGRLPYLFVTHED*NKLLPN
Trigger: GTTTGGAAGAAGTTTATTTCAATCCTCATGGGTGAC...GAATAAATACGGCAGCCGGCCGGTGGTGATAGCAGGAGGCTTATTATGCTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549033.5
CDS-3UTR GCA 90 bp GTGGCTCTCCTAAGAGTTGTTTTGTTGCTCAGTGAAGCTCCTCTCTGCCTTGCTCATTGGTGGCATTTCTaGTCCTCTAGTGGAAATTCA +
Preference number: 4 (lower is better)
Translates to: VALLRVVLLLSEAPLCLAHWWHF*SSSGNS
Trigger: TGAATTTCCACTAGAGGAGCAGAAATGCCACCAATG...AGCAAGGCAGAGAGGAGCTTCACTGAGCAACAAAACAACTCTTAGGAGAGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549305.1
ENST00000551877.5
CDS-3UTR GCA 90 bp GTAATGAATCCCATAGTGAGGTACAGCTGTACCACGCTGCTACTAAAGGAGGCCAATGGAGATAAAAGCTaGTCCAACCACAATCCAACC +
Preference number: 4 (lower is better)
Translates to: VMNPIVRYSCTTLLLKEANGDKS*SNHNPT
Trigger: GGTTGGATTGTGGTTGGAGCAGCTTTTATCTCCATT...GGCCTCCTTTAGTAGCAGCGTGGTACAGCTGTACCTCACTATGGGATTCATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR GCA 90 bp CCAAAACACTACTTACAGGACTTCACTGAAGTCCTGAGCCTCTTAAAGTCACCCATGGTTAAGGCGGGTTaGAGGTTGAAGGCTAAACCT +
Preference number: 4 (lower is better)
Translates to: PKHYLQDFTEVLSLLKSPMVKAG*RLKAKP
Trigger: AGGTTTAGCCTTCAACCTGCAACCCGCCTTAACCAT...GGGTGACTTTAAGAGGCTCAGGACTTCAGTGAAGTCCTGTAAGTAGTGTTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549033.5
CDS-3UTR GCA 90 bp TGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGGGGTTTGGGATTCAGATGGTTAAGGCGGGTTaGAGGTTGAAGGCTAAACCT +
Preference number: 4 (lower is better)
Translates to: CRIRHPPSTYLNQGFGIQMVKAG*RLKAKP
Trigger: AGGTTTAGCCTTCAACCTGCAACCCGCCTTAACCAT...CTGAATCCCAAACCCCTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR GCA 90 bp TTCACTGAAGTCCTGAGCCTCTTAAAGTCACCCATGAGGATTGAAATAAACTTCGCTTGTGTAGTCCTGTaGCAGTGGGCACAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: FTEVLSLLKSPMRIEINFACVVL*QWAQEV
Trigger: CACCTCTTGTGCCCACTGGCACAGGACTACACAAGC...GAAGTTTATTTCAATCCTCATGGGTGACTTTAAGAGGCTCAGGACTTCAGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549033.5
CDS-3UTR GCA 90 bp ATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCACCTAGCATTAGGGTTCATACTAATTGTTaGAGAGGCAGAAGCCAAATA +
Preference number: 4 (lower is better)
Translates to: IHVPCWCAAPTNSSPSIRVHTNC*RGRSQI
Trigger: TATTTGGCTTCTGCCTCTGCAACAATTAGTATGAAC...CCTAATGCTAGGTGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp ATTTTTAGACTTAGAAGTGGTTTGATTGGGTCCAAGGGGTCTCATGAGGGAACCGGCACTTGGCATTGGTaGCATTTCTGCTCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: IFRLRSGLIGSKGSHEGTGTWHW*HFCSSS
Trigger: ACTAGAGGAGCAGAAATGCCACCAATGCCAAGTGCC...GGTTCCCTCATGAGACCCCTTGGACCCAATCAAACCACTTCTAAGTCTAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CCA 90 bp AAACCTGTAATGAATCCCATAGTGAGGTACAGCTGTACCACGCTGCTACTAAAGGGCACTTGGCATTGGTaGCATTTCTGCTCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: KPVMNPIVRYSCTTLLLKGTWHW*HFCSSS
Trigger: ACTAGAGGAGCAGAAATGCCACCAATGCCAAGTGCC...CTTTAGTAGCAGCGTGGTACAGCTGTACCTCACTATGGGATTCATTACAGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CCA 90 bp TATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGCACAGGTGGGGCACTTaGCATTGGTGGCATTTCTGC +
Preference number: 4 (lower is better)
Translates to: YKGSLCRIRHPPSTYLNQHRWGT*HWWHFC
Trigger: GCAGAAATGCCACCAATGCCAAGTGCCCCACCTGTG...CTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp GGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAAGGTGGATGCACAGGTaGGGCACTTGGCATTGGTGG +
Preference number: 4 (lower is better)
Translates to: GIQNSPYNQDRKSLEDFKRWMHR*GTWHWW
Trigger: CCACCAATGCCAAGTGCCCCACCTGTGCATCCACCT...TTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp TTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAGGTGGATGCACAGGTaGGGCACTTGGCATTGGTGG +
Preference number: 4 (lower is better)
Translates to: FGIQNSPYNQDRKSLEDFRWMHR*GTWHWW
Trigger: CCACCAATGCCAAGTGCCCCACCTGTGCATCCACCT...AAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp AATGAAATGTATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACACCCCATCCTCCATCTaGAGGTGGATGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: NEMYKGSLCRIRHPPSTYTPSSI*RWMHRW
Trigger: CCACCTGTGCATCCACCTCCAGATGGAGGATGGGGT...GTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATACATTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACAACCCCATCCTCCATCTaGAGGTGGATGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTTPSSI*RWMHRW
Trigger: CCACCTGTGCATCCACCTCCAGATGGAGGATGGGGT...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp CAATTGTGTTCTTTAGACAGCGATCCCATAATAACACGTCAATCAACTGATGGAACCCCATCCTCCATCTaGAGGTGGATGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: QLCSLDSDPIITRQSTDGTPSSI*RWMHRW
Trigger: CCACCTGTGCATCCACCTCCAGATGGAGGATGGGGT...TCCATCAGTTGATTGACGTGTTATTATGGGATCGCTGTCTAAAGAACACAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549465.5
CDS-3UTR CCA 90 bp AGACAGCATAATAAGCCTCCTGCTATCACCACCGGCCGGCTGCCGTATTTATTCTACTCATCAATTCCTTaGTCTTTAGCATATGGAGCC +
Preference number: 4 (lower is better)
Translates to: RQHNKPPAITTGRLPYLFYSSIP*SLAYGA
Trigger: GGCTCCATATGCTAAAGACCAAGGAATTGATGAGTA...GAATAAATACGGCAGCCGGCCGGTGGTGATAGCAGGAGGCTTATTATGCTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CCA 90 bp TATTTGCCAATTATGGTTAAGGCGGGTTGCAGGTTGAAGGCTAAACCTAAACCTCAAGTCCGACGGCACTaGAAAATCTTGGTGCACCCA +
Preference number: 4 (lower is better)
Translates to: YLPIMVKAGCRLKAKPKPQVRRH*KILVHP
Trigger: TGGGTGCACCAAGATTTTCCAGTGCCGTCGGACTTG...AGGTTTAGGTTTAGCCTTCAACCTGCAACCCGCCTTAACCATAATTGGCAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CCA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTTCTTTATCTGGTCTCTaGCGCAGGGTGGGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQISLSGL*RRVGAA
Trigger: TGCAGCGCCCACCCTGCGCCAGAGACCAGATAAAGA...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547379.6
CDS-3UTR TCA 90 bp GGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAACTCCTCTCCCCACCTaGGGCAGAAGTTTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: GIQNSPYNQDRKSLEDFKTPLPT*GRSFLV
Trigger: CACAAGGAAACTTCTGCCTCAGGTGGGGAGAGGAGT...TTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261187.8
CDS-3UTR TCA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTCACACTCCACAATTGTaGCAAGTCCGACGGCACTGG +
Preference number: 4 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQIHTPQL*QVRRHW
Trigger: CCAGTGCCGTCGGACTTGTCACAATTGTGGAGTGTG...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp TTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTCACACTCCACAATTGTaGCAAGTCCGACGGCACTGG +
Preference number: 4 (lower is better)
Translates to: FGIQNSPYNQDRKSLEDFHTPQL*QVRRHW
Trigger: CCAGTGCCGTCGGACTTGTCACAATTGTGGAGTGTG...AAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR TCA 90 bp GGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAACCTGGAGAAGGCCACTaGAATGCACCCAGGAGGATG +
Preference number: 4 (lower is better)
Translates to: GFRILHITKTESHWKTLKPGEGH*NAPRRM
Trigger: CATCCTCCTGGGTGCATTTCAGTGGCCTTCTCCAGG...TTTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp GGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAACTTCCTGGGCTCAAATaGCCCTCTCGTCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GFRILHITKTESHWKTLKLPGLK*PSRLSL
Trigger: GAGGCTGAGACGAGAGGGTCATTTGAGCCCAGGAAG...TTTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp GGGTTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACGTTCCCACCTATGAGTaGGAATATGCGGTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: GFGIQNSPYNQDRKSLEDVPTYE*EYAVFG
Trigger: ACCAAACACCGCATATTCTCACTCATAGGTGGGAAC...GTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp TGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGGGGTTTGGGATTCAGTGCCTCCTGTCAGAATaGCAATGCAGTCTTAGCATA +
Preference number: 4 (lower is better)
Translates to: CRIRHPPSTYLNQGFGIQCLLSE*QCSLSI
Trigger: TATGCTAAGACTGCATTGTCATTCTGACAGGAGGCA...CTGAATCCCAAACCCCTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp AGACAGCATAATAAGCCTCCTGCTATCACCACCGGCCGGCTGCCGTATTTATTCGAATCCTCAAGGATGTaGAGATCAAAAAGCTTTCAA +
Preference number: 4 (lower is better)
Translates to: RQHNKPPAITTGRLPYLFESSRM*RSKSFQ
Trigger: TTGAAAGCTTTTTGATCTTCACATCCTTGAGGATTC...GAATAAATACGGCAGCCGGCCGGTGGTGATAGCAGGAGGCTTATTATGCTGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR GCA 90 bp TTCTGGGTAGTCGTGGCTCTCCTAAGAGTTGTTTTGTTGCTCAGTGAAGCTCCTAATGGAGATAAAAGCTaGTCCAACCACAATCCAACC +
Preference number: 4 (lower is better)
Translates to: FWVVVALLRVVLLLSEAPNGDKS*SNHNPT
Trigger: GGTTGGATTGTGGTTGGAGCAGCTTTTATCTCCATT...AGGAGCTTCACTGAGCAACAAAACAACTCTTAGGAGAGCCACGACTACCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551877.5
CDS-3UTR GCA 90 bp GGGTTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACATGGTTAAGGCGGGTTaGAGGTTGAAGGCTAAACCT +
Preference number: 4 (lower is better)
Translates to: GFGIQNSPYNQDRKSLEDMVKAG*RLKAKP
Trigger: AGGTTTAGCCTTCAACCTGCAACCCGCCTTAACCAT...GTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR GCA 90 bp CCTTTCCTTTGCAAGCAATCTATAGTTGATAGCATTGCCAATGAGCAGCCACACCATGGCCAATCCATTTaGCATGGGTCGCTTCCTATA +
Preference number: 4 (lower is better)
Translates to: PFLCKQSIVDSIANEQPHHGQSI*HGSLPI
Trigger: TATAGGAAGCGACCCATGGCAAATGGATTGGCCATG...GTGTGGCTGCTCATTGGCAATGCTATCAACTATAGATTGCTTGCAAAGGAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR GCA 90 bp AATGAAATGTATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACGCTTGTGTAGTCCTGTaGCAGTGGGCACAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: NEMYKGSLCRIRHPPSTYACVVL*QWAQEV
Trigger: CACCTCTTGTGCCCACTGGCACAGGACTACACAAGC...GTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATACATTTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR GCA 90 bp GGGTTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACATCCACCAATTTACCTaGAAGAGGAGGGCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: GFGIQNSPYNQDRKSLEDIHQFT*KRRAKK
Trigger: CTTCTTGGCCCTCCTCTTGCAGGTAAATTGGTGGAT...GTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR GCA 90 bp GGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAACAGCCACACGCTTGCTaGTACCACAATAGCCCCACA +
Preference number: 4 (lower is better)
Translates to: GIQNSPYNQDRKSLEDFKQPHAC*YHNSPT
Trigger: TGTGGGGCTATTGTGGTAGCAGCAAGCGTGTGGCTG...TTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR GCA 90 bp GGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAAGAGCAGCCACACGCTTaGTGCTACCACAATAGCCCC +
Preference number: 4 (lower is better)
Translates to: GFRILHITKTESHWKTLKEQPHA*CYHNSP
Trigger: GGGGCTATTGTGGTAGCAGCAAGCGTGTGGCTGCTC...TTTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR GCA 90 bp TATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGTTGCCTAGGCTGGACTaGAAGTGGGGCCATTATAGC +
Preference number: 4 (lower is better)
Translates to: YKGSLCRIRHPPSTYLNQLPRLD*KWGHYS
Trigger: GCTATAATGGCCCCACTTGCAGTCCAGCCTAGGCAA...CTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp ATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCACCTAGCATTAGGTTCTCCTCAAGACTATaGTATGGCAATAATTTCTTG +
Preference number: 4 (lower is better)
Translates to: IHVPCWCAAPTNSSPSIRFSSRL*YGNNFL
Trigger: CAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAA...CCTAATGCTAGGTGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp TTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTCACAGGTGGGGCACTTaGCATTGGTGGCATTTCTGC +
Preference number: 4 (lower is better)
Translates to: FGIQNSPYNQDRKSLEDFHRWGT*HWWHFC
Trigger: GCAGAAATGCCACCAATGCCAAGTGCCCCACCTGTG...AAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp TTGTGTTCTTTAGACAGCGATCCCATAATAACACGTCAATCAACTGATGGAATAAGGTGGATGCACAGGTaGGGCACTTGGCATTGGTGG +
Preference number: 4 (lower is better)
Translates to: LCSLDSDPIITRQSTDGIRWMHR*GTWHWW
Trigger: CCACCAATGCCAAGTGCCCCACCTGTGCATCCACCT...TATTCCATCAGTTGATTGACGTGTTATTATGGGATCGCTGTCTAAAGAACACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549465.5
CDS-3UTR CCA 90 bp TTGTGTTCTTTAGACAGCGATCCCATAATAACACGTCAATCAACTGATGGAATATCCTCCATCTGGAGGTaGATGCACAGGTGGGGCACT +
Preference number: 4 (lower is better)
Translates to: LCSLDSDPIITRQSTDGISSIWR*MHRWGT
Trigger: AGTGCCCCACCTGTGCATCCACCTCCAGATGGAGGA...TATTCCATCAGTTGATTGACGTGTTATTATGGGATCGCTGTCTAAAGAACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549465.5
CDS-3UTR CCA 90 bp TGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGGGGTTTGGGATTCAGCCAATCCATTTGCCATaGGTCGCTTCCTATAGAAGT +
Preference number: 4 (lower is better)
Translates to: CRIRHPPSTYLNQGFGIQPIHLP*VASYRS
Trigger: ACTTCTATAGGAAGCGACCCATGGCAAATGGATTGG...CTGAATCCCAAACCCCTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp TATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGCAGGACTTCCTGCCATaGCCAATCCATTTGCCATGG +
Preference number: 4 (lower is better)
Translates to: YKGSLCRIRHPPSTYLNQQDFLP*PIHLPW
Trigger: CCATGGCAAATGGATTGGCCATGGCAGGAAGTCCTG...CTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp AATGAAATGTATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACGTAGTCCTGTGCCAGTaGGCACAAGAGGTGACACAC +
Preference number: 4 (lower is better)
Translates to: NEMYKGSLCRIRHPPSTYVVLCQ*AQEVTH
Trigger: GTGTGTCACCTCTTGTGCCCACTGGCACAGGACTAC...GTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATACATTTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp TATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGGGCACTGGAAAATCTTaGTGCACCCACGAGGTCCAT +
Preference number: 4 (lower is better)
Translates to: YKGSLCRIRHPPSTYLNQGTGKS*CTHEVH
Trigger: ATGGACCTCGTGGGTGCACCAAGATTTTCCAGTGCC...CTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp ATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCACCTAGCATTAGGAGTGCTGAATTAAACTaGGCTGCAATATTTCAAGTT +
Preference number: 4 (lower is better)
Translates to: IHVPCWCAAPTNSSPSIRSAELN*AAIFQV
Trigger: AACTTGAAATATTGCAGCCCAGTTTAATTCAGCACT...CCTAATGCTAGGTGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp ATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCACCTAGCATTAGGCACTTTTCTCAATCTTaGAAAGATTCTGCTAAAGCA +
Preference number: 4 (lower is better)
Translates to: IHVPCWCAAPTNSSPSIRHFSQS*KDSAKA
Trigger: TGCTTTAGCAGAATCTTTCCAAGATTGAGAAAAGTG...CCTAATGCTAGGTGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp TTGTGTTCTTTAGACAGCGATCCCATAATAACACGTCAATCAACTGATGGAATATCTTTATCTGGTCTCTaGCGCAGGGTGGGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: LCSLDSDPIITRQSTDGISLSGL*RRVGAA
Trigger: TGCAGCGCCCACCCTGCGCCAGAGACCAGATAAAGA...TATTCCATCAGTTGATTGACGTGTTATTATGGGATCGCTGTCTAAAGAACACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549465.5
CDS-3UTR TCA 90 bp TATTTGCCAATTATGGTTAAGGCGGGTTGCAGGTTGAAGGCTAAACCTAAACCTAGACATAAGTTTCCCTaGTCTATGGACTCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: YLPIMVKAGCRLKAKPKPRHKFP*SMDSSP
Trigger: GGGAGAGGAGTCCATAGATCAGGGAAACTTATGTCT...AGGTTTAGGTTTAGCCTTCAACCTGCAACCCGCCTTAACCATAATTGGCAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR TCA 90 bp TGCAAGCAATCTATAGTTGATAGCATTGCCAATGAGCAGCCACACGCTTGCTGCAGCCAGCATAATGGATaGAATCCATGCTATTTCACT +
Preference number: 4 (lower is better)
Translates to: CKQSIVDSIANEQPHACCSQHNG*NPCYFT
Trigger: AGTGAAATAGCATGGATTTCATCCATTATGCTGGCT...GCAGCAAGCGTGTGGCTGCTCATTGGCAATGCTATCAACTATAGATTGCTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR TCA 90 bp TTCTGGGTAGTCGTGGCTCTCCTAAGAGTTGTTTTGTTGCTCAGTGAAGCTCCTAGCCAGCATAATGGATaGAATCCATGCTATTTCACT +
Preference number: 4 (lower is better)
Translates to: FWVVVALLRVVLLLSEAPSQHNG*NPCYFT
Trigger: AGTGAAATAGCATGGATTTCATCCATTATGCTGGCT...AGGAGCTTCACTGAGCAACAAAACAACTCTTAGGAGAGCCACGACTACCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551877.5
CDS-3UTR TCA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTAGGCGGGTTGCAGGTTaGAGGCTAAACCTAAACCTG +
Preference number: 4 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQIRRVAG*RLNLNL
Trigger: CAGGTTTAGGTTTAGCCTTCAACCTGCAACCCGCCT...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp TTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAGGCGGGTTGCAGGTTaGAGGCTAAACCTAAACCTG +
Preference number: 4 (lower is better)
Translates to: FGIQNSPYNQDRKSLEDFRRVAG*RLNLNL
Trigger: CAGGTTTAGGTTTAGCCTTCAACCTGCAACCCGCCT...AAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR TCA 90 bp TATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGCACCCACGAGGTCCATaGGAGTTTCAAAGAGAACAC +
Preference number: 4 (lower is better)
Translates to: YKGSLCRIRHPPSTYLNQHPRGP*EFQREH
Trigger: GTGTTCTCTTTGAAACTCTCATGGACCTCGTGGGTG...CTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR TCA 90 bp GATTGCAAAACTGAAGAAGTACTGAATTCGAGGTCGAATATATTTGGAGTTTGCCACACTCCACAATTGTaGCAAGTCCGACGGCACTGG +
Preference number: 4 (lower is better)
Translates to: DCKTEEVLNSRSNIFGVCHTPQL*QVRRHW
Trigger: CCAGTGCCGTCGGACTTGTCACAATTGTGGAGTGTG...GCAAACTCCAAATATATTCGACCTCGAATTCAGTACTTCTTCAGTTTTGCAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR TCA 90 bp TATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGTGGAAGGGAAGGAACTaGGAGAGCTTAGAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: YKGSLCRIRHPPSTYLNQWKGRN*ESLEGS
Trigger: TGAACCCTCTAAGCTCTCTCAGTTCCTTCCCTTCCA...CTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp TGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGGGGTTTGGGATTCAGAATGTGAACTGGTTTTaGCGTGACGAGAAACTCATC +
Preference number: 4 (lower is better)
Translates to: CRIRHPPSTYLNQGFGIQNVNWF*RDEKLI
Trigger: GATGAGTTTCTCGTCACGTCAAAACCAGTTCACATT...CTGAATCCCAAACCCCTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp CTTTCTGGATTACGAACTAAAATCCCTGTAAAATCAATGGATGTGACTCATTGTTTTATTTATGGCCCCTaGCGTGTCCTCGCCCGCCAC +
Preference number: 4 (lower is better)
Translates to: LSGLRTKIPVKSMDVTHCFIYGP*RVLARH
Trigger: GTGGCGGGCGAGGACACGTCAGGGGCCATAAATAAA...ACAATGAGTCACATCCATTGATTTTACAGGGATTTTAGTTCGTAATCCAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000547379.6
CDS-3UTR TCA 90 bp TCCTTTTCCCAGATTCATCAGAGGAGTCATTATGTACGGCAGCTAGGCATGATCTCTTTAAAGGGTGAATaGTGCATTCCGCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: SFSQIHQRSHYVRQLGMISLKGE*CIPLLL
Trigger: AAGGAGAAGCGGAATGCATCATTCACCCTTTAAAGA...GATCATGCCTAGCTGCCGTACATAATGACTCCTCTGATGAATCTGGGAAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546459.5
CDS-3UTR TCA 90 bp TCCCAGATTCATCAGAGGAGTCATTATGTACGGCAGCTAGGCATGATCCTGATTGATCTCTTTAAAGGGTaGATGATGCATTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: SQIHQRSHYVRQLGMILIDLFKG*MMHSAS
Trigger: AGAAGCGGAATGCATCATTCACCCTTTAAAGAGATC...AATCAGGATCATGCCTAGCTGCCGTACATAATGACTCCTCTGATGAATCTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546459.5
CDS-3UTR GCA 90 bp CATCTCCTTTTCCCAGATTCATCAGAGGAGTCATTATGTACGGCAGCTAGGCATCATTGGTGGCATTTCTaGTCCTCTAGTGGAAATTCA +
Preference number: 4 (lower is better)
Translates to: HLLFPDSSEESLCTAARHHWWHF*SSSGNS
Trigger: TGAATTTCCACTAGAGGAGCAGAAATGCCACCAATG...ATGCCTAGCTGCCGTACATAATGACTCCTCTGATGAATCTGGGAAAAGGAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546459.5
CDS-3UTR GCA 90 bp TTCCATCTCCTTTTCCCAGATTCATCAGAGGAGTCATTATGTACGGCAGCTAGGAATGGAGATAAAAGCTaGTCCAACCACAATCCAACC +
Preference number: 4 (lower is better)
Translates to: FHLLFPDSSEESLCTAARNGDKS*SNHNPT
Trigger: GGTTGGATTGTGGTTGGAGCAGCTTTTATCTCCATT...CCTAGCTGCCGTACATAATGACTCCTCTGATGAATCTGGGAAAAGGAGATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546459.5
CDS-3UTR GCA 90 bp GGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAAGCTTGTGTAGTCCTGTaGCAGTGGGCACAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: GFRILHITKTESHWKTLKACVVL*QWAQEV
Trigger: CACCTCTTGTGCCCACTGGCACAGGACTACACAAGC...TTTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR GCA 90 bp TATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGACTGGAAAATCTTGGTaGACCCACGAGGTCCATGAG +
Preference number: 4 (lower is better)
Translates to: YKGSLCRIRHPPSTYLNQTGKSW*THEVHE
Trigger: CTCATGGACCTCGTGGGTGCACCAAGATTTTCCAGT...CTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR GCA 90 bp CTAGCAAACATATCAACGAAAGCCATAACAGATAGCAGAAAAGCTGCCGAGTACATCCACCAATTTACCTaGAAGAGGAGGGCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: LANISTKAITDSRKAAEYIHQFT*KRRAKK
Trigger: CTTCTTGGCCCTCCTCTTGCAGGTAAATTGGTGGAT...GTACTCGGCAGCTTTTCTGCTATCTGTTATGGCTTTCGTTGATATGTTTGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR GCA 90 bp AAATATGTTCATACTAATTGTTGCAGAGGCAGAAGCCAAATATATCTCCTCCTCCAGCCACACGCTTGCTaGTACCACAATAGCCCCACA +
Preference number: 4 (lower is better)
Translates to: KYVHTNCCRGRSQIYLLLQPHAC*YHNSPT
Trigger: TGTGGGGCTATTGTGGTAGCAGCAAGCGTGTGGCTG...GAGGAGGAGATATATTTGGCTTCTGCCTCTGCAACAATTAGTATGAACATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp GTAATGAATCCCATAGTGAGGTACAGCTGTACCACGCTGCTACTAAAGGAGGCCAGGTGTTTAGAAACATaGTCTTCCATTTCACCAAGA +
Preference number: 4 (lower is better)
Translates to: VMNPIVRYSCTTLLLKEARCLET*SSISPR
Trigger: TCTTGGTGAAATGGAAGACCATGTTTCTAAACACCT...GGCCTCCTTTAGTAGCAGCGTGGTACAGCTGTACCTCACTATGGGATTCATTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CCA 90 bp GGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAATGGGGCACTTGGCATTaGTGGCATTTCTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GIQNSPYNQDRKSLEDFKWGTWH*WHFCSS
Trigger: AGAGGAGCAGAAATGCCACCAATGCCAAGTGCCCCA...TTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTTGGGGCACTTGGCATTaGTGGCATTTCTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQIWGTWH*WHFCSS
Trigger: AGAGGAGCAGAAATGCCACCAATGCCAAGTGCCCCA...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp TTGTGTTCTTTAGACAGCGATCCCATAATAACACGTCAATCAACTGATGGAATACACAGGTGGGGCACTTaGCATTGGTGGCATTTCTGC +
Preference number: 4 (lower is better)
Translates to: LCSLDSDPIITRQSTDGIHRWGT*HWWHFC
Trigger: GCAGAAATGCCACCAATGCCAAGTGCCCCACCTGTG...TATTCCATCAGTTGATTGACGTGTTATTATGGGATCGCTGTCTAAAGAACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549465.5
CDS-3UTR CCA 90 bp CTTTCTGGATTACGAACTAAAATCCCTGTAAAATCAATGGATGTGACTCATTGTTCCTCCATCTGGAGGTaGATGCACAGGTGGGGCACT +
Preference number: 4 (lower is better)
Translates to: LSGLRTKIPVKSMDVTHCSSIWR*MHRWGT
Trigger: AGTGCCCCACCTGTGCATCCACCTCCAGATGGAGGA...ACAATGAGTCACATCCATTGATTTTACAGGGATTTTAGTTCGTAATCCAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp GGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAAGTAGTCCTGTGCCAGTaGGCACAAGAGGTGACACAC +
Preference number: 4 (lower is better)
Translates to: GFRILHITKTESHWKTLKVVLCQ*AQEVTH
Trigger: GTGTGTCACCTCTTGTGCCCACTGGCACAGGACTAC...TTTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp AATGAAATGTATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACGGCACTGGAAAATCTTaGTGCACCCACGAGGTCCAT +
Preference number: 4 (lower is better)
Translates to: NEMYKGSLCRIRHPPSTYGTGKS*CTHEVH
Trigger: ATGGACCTCGTGGGTGCACCAAGATTTTCCAGTGCC...GTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATACATTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp GGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAGGCACTGGAAAATCTTaGTGCACCCACGAGGTCCAT +
Preference number: 4 (lower is better)
Translates to: GIQNSPYNQDRKSLEDFKGTGKS*CTHEVH
Trigger: ATGGACCTCGTGGGTGCACCAAGATTTTCCAGTGCC...TTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp GGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAAGGCTGGACTGCAAGTaGGGCCATTATAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: GIQNSPYNQDRKSLEDFKRLDCK*GHYSSL
Trigger: CAGTGAGCTATAATGGCCCCACTTGCAGTCCAGCCT...TTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp CATCTCCTTTTCCCAGATTCATCAGAGGAGTCATTATGTACGGCAGCTAGGCATGCAGAAGTTTCCTTGTaGACCATTGCTCTTTTTAGA +
Preference number: 4 (lower is better)
Translates to: HLLFPDSSEESLCTAARHAEVSL*TIALFR
Trigger: TCTAAAAAGAGCAATGGTTCACAAGGAAACTTCTGC...ATGCCTAGCTGCCGTACATAATGACTCCTCTGATGAATCTGGGAAAAGGAGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546459.5
CDS-3UTR TCA 90 bp TCCTTTTCCCAGATTCATCAGAGGAGTCATTATGTACGGCAGCTAGGCATGATCAGCCAGCATAATGGATaGAATCCATGCTATTTCACT +
Preference number: 4 (lower is better)
Translates to: SFSQIHQRSHYVRQLGMISQHNG*NPCYFT
Trigger: AGTGAAATAGCATGGATTTCATCCATTATGCTGGCT...GATCATGCCTAGCTGCCGTACATAATGACTCCTCTGATGAATCTGGGAAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546459.5
CDS-3UTR TCA 90 bp TGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGGGGTTTGGGATTCAGAGCCAGCATAATGGATaGAATCCATGCTATTTCACT +
Preference number: 4 (lower is better)
Translates to: CRIRHPPSTYLNQGFGIQSQHNG*NPCYFT
Trigger: AGTGAAATAGCATGGATTTCATCCATTATGCTGGCT...CTGAATCCCAAACCCCTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR TCA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTGACTTAGAAGTGGTTTaGTTGGGTCCAAGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQIDLEVV*LGPRGL
Trigger: GAGACCCCTTGGACCCAATCAAACCACTTCTAAGTC...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp TTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAGTGGGCACAAGAGGTaGCACACTCCATTGAACATG +
Preference number: 4 (lower is better)
Translates to: FGIQNSPYNQDRKSLEDFSGHKR*HTPLNM
Trigger: CATGTTCAATGGAGTGTGTCACCTCTTGTGCCCACT...AAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR TCA 90 bp TTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTCACCCACGAGGTCCATaGGAGTTTCAAAGAGAACAC +
Preference number: 4 (lower is better)
Translates to: FGIQNSPYNQDRKSLEDFHPRGP*EFQREH
Trigger: GTGTTCTCTTTGAAACTCTCATGGACCTCGTGGGTG...AAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR TCA 90 bp AATGAAATGTATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACCACCCACGAGGTCCATaGGAGTTTCAAAGAGAACAC +
Preference number: 4 (lower is better)
Translates to: NEMYKGSLCRIRHPPSTYHPRGP*EFQREH
Trigger: GTGTTCTCTTTGAAACTCTCATGGACCTCGTGGGTG...GTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATACATTTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR TCA 90 bp TCTATAGTTGATAGCATTGCCAATGAGCAGCCACACGCTTGCTGCTACCACAATGTTAGTTTCTCTTTCTaGGGTTACACTCTGTGCATT +
Preference number: 4 (lower is better)
Translates to: SIVDSIANEQPHACCYHNVSFSF*GYTLCI
Trigger: AATGCACAGAGTGTAACCTCAGAAAGAGAAACTAAC...ATTGTGGTAGCAGCAAGCGTGTGGCTGCTCATTGGCAATGCTATCAACTATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR TCA 90 bp TGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGGGGTTTGGGATTCAGGTTAGTTTCTCTTTCTaGGGTTACACTCTGTGCATT +
Preference number: 4 (lower is better)
Translates to: CRIRHPPSTYLNQGFGIQVSFSF*GYTLCI
Trigger: AATGCACAGAGTGTAACCTCAGAAAGAGAAACTAAC...CTGAATCCCAAACCCCTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR TCA 90 bp GGGTTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACAATGTGAACTGGTTTTaGCGTGACGAGAAACTCATC +
Preference number: 4 (lower is better)
Translates to: GFGIQNSPYNQDRKSLEDNVNWF*RDEKLI
Trigger: GATGAGTTTCTCGTCACGTCAAAACCAGTTCACATT...GTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp AAGGCTAAACCTAAACCTGTAATGAATCCCATAGTGAGGTACAGCTGTACCACGAATGGAGATAAAAGCTaGTCCAACCACAATCCAACC +
Preference number: 4 (lower is better)
Translates to: KAKPKPVMNPIVRYSCTTNGDKS*SNHNPT
Trigger: GGTTGGATTGTGGTTGGAGCAGCTTTTATCTCCATT...CGTGGTACAGCTGTACCTCACTATGGGATTCATTACAGGTTTAGGTTTAGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR GCA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACATCACCACCGGCCGGCTaGCGTATTTATTCACCAAAA +
Preference number: 4 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTSPPAG*RIYSPK
Trigger: TTTTGGTGAATAAATACGGCAGCCGGCCGGTGGTGA...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp GGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAATCACCACCGGCCGGCTaGCGTATTTATTCACCAAAA +
Preference number: 4 (lower is better)
Translates to: GIQNSPYNQDRKSLEDFKSPPAG*RIYSPK
Trigger: TTTTGGTGAATAAATACGGCAGCCGGCCGGTGGTGA...TTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR GCA 90 bp TTCACTGAAGTCCTGAGCCTCTTAAAGTCACCCATGAGGATTGAAATAAACTTCGAAAACAGGACTTCCTaGCATGGCCAATCCATTTGC +
Preference number: 4 (lower is better)
Translates to: FTEVLSLLKSPMRIEINFENRTS*HGQSIC
Trigger: GCAAATGGATTGGCCATGGCAGGAAGTCCTGTTTTC...GAAGTTTATTTCAATCCTCATGGGTGACTTTAAGAGGCTCAGGACTTCAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549033.5
CDS-3UTR GCA 90 bp GGGTTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACAGAATTTTCAAGTGCTaGCATTCTTATCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GFGIQNSPYNQDRKSLEDRIFKC*HSYPRR
Trigger: CCTCCTGGGATAAGAATGGCAGCACTTGAAAATTCT...GTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp TGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGGGGTTTGGGATTCAGAACTATACCTACGATTaGAAGTCATACAGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: CRIRHPPSTYLNQGFGIQNYTYD*KSYSAS
Trigger: AGAGGCACTGTATGACTTGCAATCGTAGGTATAGTT...CTGAATCCCAAACCCCTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp GGTCTCATGAGGGAACCAGCCACACAGGCATTCAAAAGTAGACTTCCCAAAATCAGGTGTTTAGAAACATaGTCTTCCATTTCACCAAGA +
Preference number: 4 (lower is better)
Translates to: GLMREPATQAFKSRLPKIRCLET*SSISPR
Trigger: TCTTGGTGAAATGGAAGACCATGTTTCTAAACACCT...GATTTTGGGAAGTCTACTTTTGAATGCCTGTGTGGCTGGTTCCCTCATGAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CCA 90 bp TTCCATCTCCTTTTCCCAGATTCATCAGAGGAGTCATTATGTACGGCAGCTAGGGAAATTCAAGTAACCTaGCGACAGGTGTTTAGAAAC +
Preference number: 4 (lower is better)
Translates to: FHLLFPDSSEESLCTAAREIQVT*RQVFRN
Trigger: GTTTCTAAACACCTGTCGCCAGGTTACTTGAATTTC...CCTAGCTGCCGTACATAATGACTCCTCTGATGAATCTGGGAAAAGGAGATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546459.5
CDS-3UTR CCA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTGGCACTTGGCATTGGTaGCATTTCTGCTCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQIGTWHW*HFCSSS
Trigger: ACTAGAGGAGCAGAAATGCCACCAATGCCAAGTGCC...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp TTGTGTTCTTTAGACAGCGATCCCATAATAACACGTCAATCAACTGATGGAATATGGGGCACTTGGCATTaGTGGCATTTCTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LCSLDSDPIITRQSTDGIWGTWH*WHFCSS
Trigger: AGAGGAGCAGAAATGCCACCAATGCCAAGTGCCCCA...TATTCCATCAGTTGATTGACGTGTTATTATGGGATCGCTGTCTAAAGAACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549465.5
CDS-3UTR CCA 90 bp TATTTGCCAATTATGGTTAAGGCGGGTTGCAGGTTGAAGGCTAAACCTAAACCTCCAATCCATTTGCCATaGGTCGCTTCCTATAGAAGT +
Preference number: 4 (lower is better)
Translates to: YLPIMVKAGCRLKAKPKPPIHLP*VASYRS
Trigger: ACTTCTATAGGAAGCGACCCATGGCAAATGGATTGG...AGGTTTAGGTTTAGCCTTCAACCTGCAACCCGCCTTAACCATAATTGGCAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CCA 90 bp GGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAACAGGACTTCCTGCCATaGCCAATCCATTTGCCATGG +
Preference number: 4 (lower is better)
Translates to: GFRILHITKTESHWKTLKQDFLP*PIHLPW
Trigger: CCATGGCAAATGGATTGGCCATGGCAGGAAGTCCTG...TTTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp TACATGTATTTATATTCTCCAGTTAAATCCACCAATTTACCTGCAAGAGGAGGGCAGGACTTCCTGCCATaGCCAATCCATTTGCCATGG +
Preference number: 4 (lower is better)
Translates to: YMYLYSPVKSTNLPARGGQDFLP*PIHLPW
Trigger: CCATGGCAAATGGATTGGCCATGGCAGGAAGTCCTG...CCCTCCTCTTGCAGGTAAATTGGTGGATTTAACTGGAGAATATAAATACATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CCA 90 bp TACATGTATTTATATTCTCCAGTTAAATCCACCAATTTACCTGCAAGAGGAGGGGGCACTGGAAAATCTTaGTGCACCCACGAGGTCCAT +
Preference number: 4 (lower is better)
Translates to: YMYLYSPVKSTNLPARGGGTGKS*CTHEVH
Trigger: ATGGACCTCGTGGGTGCACCAAGATTTTCCAGTGCC...CCCTCCTCTTGCAGGTAAATTGGTGGATTTAACTGGAGAATATAAATACATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CCA 90 bp AAATATGTTCATACTAATTGTTGCAGAGGCAGAAGCCAAATATATCTCCTCCTCCTTCCTTTGCTTCTCTaGCCTCTATTGGGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: KYVHTNCCRGRSQIYLLLLPLLL*PLLGGS
Trigger: GCTGCCTCCCAATAGAGGCCAGAGAAGCAAAGGAAG...GAGGAGGAGATATATTTGGCTTCTGCCTCTGCAACAATTAGTATGAACATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp GGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAACTTCCTTTGCTTCTCTaGCCTCTATTGGGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: GFRILHITKTESHWKTLKLPLLL*PLLGGS
Trigger: GCTGCCTCCCAATAGAGGCCAGAGAAGCAAAGGAAG...TTTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp TGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGGGGTTTGGGATTCAGACGAATTATCTGCCGTaGCAATCAGGAAATAGTCTT +
Preference number: 4 (lower is better)
Translates to: CRIRHPPSTYLNQGFGIQTNYLP*QSGNSL
Trigger: AAGACTATTTCCTGATTGCCACGGCAGATAATTCGT...CTGAATCCCAAACCCCTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTGAGTCCCAGAGTCTTTaGTTCCCCAGATCACCTTGT +
Preference number: 4 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQIESQSL*FPRSPC
Trigger: ACAAGGTGATCTGGGGAACCAAAGACTCTGGGACTC...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547379.6
CDS-3UTR CCA 90 bp AATGAAATGTATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACGAGTCCCAGAGTCTTTaGTTCCCCAGATCACCTTGT +
Preference number: 4 (lower is better)
Translates to: NEMYKGSLCRIRHPPSTYESQSL*FPRSPC
Trigger: ACAAGGTGATCTGGGGAACCAAAGACTCTGGGACTC...GTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATACATTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547379.6
ENST00000552432.5
CDS-3UTR TCA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACAAGACATAAGTTTCCCTaGTCTATGGACTCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTRHKFP*SMDSSP
Trigger: GGGAGAGGAGTCCATAGATCAGGGAAACTTATGTCT...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261187.8
CDS-3UTR TCA 90 bp CTTTCTGGATTACGAACTAAAATCCCTGTAAAATCAATGGATGTGACTCATTGTAGGCGGGTTGCAGGTTaGAGGCTAAACCTAAACCTG +
Preference number: 4 (lower is better)
Translates to: LSGLRTKIPVKSMDVTHCRRVAG*RLNLNL
Trigger: CAGGTTTAGGTTTAGCCTTCAACCTGCAACCCGCCT...ACAATGAGTCACATCCATTGATTTTACAGGGATTTTAGTTCGTAATCCAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp AAATATGTTCATACTAATTGTTGCAGAGGCAGAAGCCAAATATATCTCCTCCTCAGTGGGCACAAGAGGTaGCACACTCCATTGAACATG +
Preference number: 4 (lower is better)
Translates to: KYVHTNCCRGRSQIYLLLSGHKR*HTPLNM
Trigger: CATGTTCAATGGAGTGTGTCACCTCTTGTGCCCACT...GAGGAGGAGATATATTTGGCTTCTGCCTCTGCAACAATTAGTATGAACATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp GGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAATGGAAGGGAAGGAACTaGGAGAGCTTAGAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: GFRILHITKTESHWKTLKWKGRN*ESLEGS
Trigger: TGAACCCTCTAAGCTCTCTCAGTTCCTTCCCTTCCA...TTTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp GGGTTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACAAAATGGGAAAGTGCTaGATTAAACTGGGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: GFGIQNSPYNQDRKSLEDKMGKC*IKLGCN
Trigger: ATTGCAGCCCAGTTTAATTCAGCACTTTCCCATTTT...GTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp GGGTTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACCTCTGTATTCAGGAGTaGTTCAAATTCCCAGATGTT +
Preference number: 4 (lower is better)
Translates to: GFGIQNSPYNQDRKSLEDLCIQE*FKFPDV
Trigger: AACATCTGGGAATTTGAATCACTCCTGAATACAGAG...GTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp AAATATGTTCATACTAATTGTTGCAGAGGCAGAAGCCAAATATATCTCCTCCTCGCAGCCAGACAAATGTaGACTGGTTTTGACGTGACG +
Preference number: 4 (lower is better)
Translates to: KYVHTNCCRGRSQIYLLLAARQM*TGFDVT
Trigger: CGTCACGTCAAAACCAGTTCACATTTGTCTGGCTGC...GAGGAGGAGATATATTTGGCTTCTGCCTCTGCAACAATTAGTATGAACATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACATGCTACTGCCAGGTGTaGCTGTACAAATCATGTGCT +
Preference number: 4 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTCYCQV*LYKSCA
Trigger: AGCACATGATTTGTACAGTCACACCTGGCAGTAGCA...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp AATGAAATGTATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACTGCTACTGCCAGGTGTaGCTGTACAAATCATGTGCT +
Preference number: 4 (lower is better)
Translates to: NEMYKGSLCRIRHPPSTYCYCQV*LYKSCA
Trigger: AGCACATGATTTGTACAGTCACACCTGGCAGTAGCA...GTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATACATTTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp GGGTTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACAGACAAAGAGGTGAATaGCAACAAAGATGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: GFGIQNSPYNQDRKSLEDRQRGE*QQRCSE
Trigger: CTCTGAACATCTTTGTTGTCATTCACCTCTTTGTCT...GTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp TGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGGGGTTTGGGATTCAGAGAAATATGTACTCTTaGGATTCGGAGGATGAGAAA +
Preference number: 4 (lower is better)
Translates to: CRIRHPPSTYLNQGFGIQRNMYS*DSEDEK
Trigger: TTTCTCATCCTCCGAATCTCAAGAGTACATATTTCT...CTGAATCCCAAACCCCTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp TATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGTGCCTCCTGTCAGAATaGCAATGCAGTCTTAGCATA +
Preference number: 4 (lower is better)
Translates to: YKGSLCRIRHPPSTYLNQCLLSE*QCSLSI
Trigger: TATGCTAAGACTGCATTGTCATTCTGACAGGAGGCA...CTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp CTCCTTTTCCCAGATTCATCAGAGGAGTCATTATGTACGGCAGCTAGGCATGATGAATCCTCAAGGATGTaGAGATCAAAAAGCTTTCAA +
Preference number: 4 (lower is better)
Translates to: LLFPDSSEESLCTAARHDESSRM*RSKSFQ
Trigger: TTGAAAGCTTTTTGATCTTCACATCCTTGAGGATTC...ATCATGCCTAGCTGCCGTACATAATGACTCCTCTGATGAATCTGGGAAAAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546459.5
CDS-3UTR GCA 90 bp TTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTACTTACAGGACCTCCTaGGTACATAACAGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: FGIQNSPYNQDRKSLEDFTYRTS*VHNSQH
Trigger: ATGCTGGCTGTTATGTACGCAGGAGGTCCTGTAAGT...AAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR GCA 90 bp GGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAACTTACAGGACCTCCTaGGTACATAACAGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: GIQNSPYNQDRKSLEDFKTYRTS*VHNSQH
Trigger: ATGCTGGCTGTTATGTACGCAGGAGGTCCTGTAAGT...TTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR GCA 90 bp GATTGCAAAACTGAAGAAGTACTGAATTCGAGGTCGAATATATTTGGAGTTTGCTCACCACCGGCCGGCTaGCGTATTTATTCACCAAAA +
Preference number: 4 (lower is better)
Translates to: DCKTEEVLNSRSNIFGVCSPPAG*RIYSPK
Trigger: TTTTGGTGAATAAATACGGCAGCCGGCCGGTGGTGA...GCAAACTCCAAATATATTCGACCTCGAATTCAGTACTTCTTCAGTTTTGCAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR GCA 90 bp TTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTGAAAACAGGACTTCCTaGCATGGCCAATCCATTTGC +
Preference number: 4 (lower is better)
Translates to: FGIQNSPYNQDRKSLEDFENRTS*HGQSIC
Trigger: GCAAATGGATTGGCCATGGCAGGAAGTCCTGTTTTC...AAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR GCA 90 bp GGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAATCCACCAATTTACCTaGAAGAGGAGGGCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: GIQNSPYNQDRKSLEDFKIHQFT*KRRAKK
Trigger: CTTCTTGGCCCTCCTCTTGCAGGTAAATTGGTGGAT...TTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR GCA 90 bp TGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGGGGTTTGGGATTCAGCTCAAACATGAGTTCTaGATATGGTTGTGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: CRIRHPPSTYLNQGFGIQLKHEF*IWLCRN
Trigger: ATTTCTGCACAACCATATGCAGAACTCATGTTTGAG...CTGAATCCCAAACCCCTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTGAACTGTGTGTTCTGTaGTCTGGCGTTCTACTTCAG +
Preference number: 4 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQIELCVL*SGVLLQ
Trigger: CTGAAGTAGAACGCCAGAGCACAGAACACACAGTTC...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp AAGGCTAAACCTAAACCTGTAATGAATCCCATAGTGAGGTACAGCTGTACCACGAAATATTCTACCTCCTaGGTACATAACAGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: KAKPKPVMNPIVRYSCTTKYSTS*VHNSQH
Trigger: ATGCTGGCTGTTATGTACGCAGGAGGTAGAATATTT...CGTGGTACAGCTGTACCTCACTATGGGATTCATTACAGGTTTAGGTTTAGCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549033.5
CDS-3UTR CCA 90 bp TCCCAGATTCATCAGAGGAGTCATTATGTACGGCAGCTAGGCATGATCCTGATTAGGTGTTTAGAAACATaGTCTTCCATTTCACCAAGA +
Preference number: 4 (lower is better)
Translates to: SQIHQRSHYVRQLGMILIRCLET*SSISPR
Trigger: TCTTGGTGAAATGGAAGACCATGTTTCTAAACACCT...AATCAGGATCATGCCTAGCTGCCGTACATAATGACTCCTCTGATGAATCTGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546459.5
CDS-3UTR CCA 90 bp CCTTTCCTTTGCAAGCAATCTATAGTTGATAGCATTGCCAATGAGCAGCCACACGAAATTCAAGTAACCTaGCGACAGGTGTTTAGAAAC +
Preference number: 4 (lower is better)
Translates to: PFLCKQSIVDSIANEQPHEIQVT*RQVFRN
Trigger: GTTTCTAAACACCTGTCGCCAGGTTACTTGAATTTC...GTGTGGCTGCTCATTGGCAATGCTATCAACTATAGATTGCTTGCAAAGGAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CCA 90 bp TTCCAATTGTGTTCTTTAGACAGCGATCCCATAATAACACGTCAATCAACTGATGGCACTTGGCATTGGTaGCATTTCTGCTCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: FQLCSLDSDPIITRQSTDGTWHW*HFCSSS
Trigger: ACTAGAGGAGCAGAAATGCCACCAATGCCAAGTGCC...ATCAGTTGATTGACGTGTTATTATGGGATCGCTGTCTAAAGAACACAATTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549465.5
CDS-3UTR CCA 90 bp TATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGCCAATCCATTTGCCATaGGTCGCTTCCTATAGAAGT +
Preference number: 4 (lower is better)
Translates to: YKGSLCRIRHPPSTYLNQPIHLP*VASYRS
Trigger: ACTTCTATAGGAAGCGACCCATGGCAAATGGATTGG...CTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp GGGTTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTACTCATCAATTCCTTaGTCTTTAGCATATGGAGCC +
Preference number: 4 (lower is better)
Translates to: GFGIQNSPYNQDRKSLEDYSSIP*SLAYGA
Trigger: GGCTCCATATGCTAAAGACCAAGGAATTGATGAGTA...GTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp AAACCTGTAATGAATCCCATAGTGAGGTACAGCTGTACCACGCTGCTACTAAAGTACTCATCAATTCCTTaGTCTTTAGCATATGGAGCC +
Preference number: 4 (lower is better)
Translates to: KPVMNPIVRYSCTTLLLKYSSIP*SLAYGA
Trigger: GGCTCCATATGCTAAAGACCAAGGAATTGATGAGTA...CTTTAGTAGCAGCGTGGTACAGCTGTACCTCACTATGGGATTCATTACAGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CCA 90 bp GGGTTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTACTCTGTGTACATGTaGGTAAGTATGTGGGAGTAT +
Preference number: 4 (lower is better)
Translates to: GFGIQNSPYNQDRKSLEDYSVYM*VSMWEY
Trigger: ATACTCCCACATACTTACCCACATGTACACAGAGTA...GTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTCTTGCAAAAGTTAGCTaGATGTGGCTGTTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQILAKVS*MWLLPR
Trigger: CCTTGGCAACAGCCACATCCAGCTAACTTTTGCAAG...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp TGTTCTTTAGACAGCGATCCCATAATAACACGTCAATCAACTGATGGAATATACGAGTCCCAGAGTCTTTaGTTCCCCAGATCACCTTGT +
Preference number: 4 (lower is better)
Translates to: CSLDSDPIITRQSTDGIYESQSL*FPRSPC
Trigger: ACAAGGTGATCTGGGGAACCAAAGACTCTGGGACTC...GTATATTCCATCAGTTGATTGACGTGTTATTATGGGATCGCTGTCTAAAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549465.5
CDS-3UTR TCA 90 bp GATTGCAAAACTGAAGAAGTACTGAATTCGAGGTCGAATATATTTGGAGTTTGCAGACATAAGTTTCCCTaGTCTATGGACTCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: DCKTEEVLNSRSNIFGVCRHKFP*SMDSSP
Trigger: GGGAGAGGAGTCCATAGATCAGGGAAACTTATGTCT...GCAAACTCCAAATATATTCGACCTCGAATTCAGTACTTCTTCAGTTTTGCAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR TCA 90 bp CTAGCAAACATATCAACGAAAGCCATAACAGATAGCAGAAAAGCTGCCGAGTACGTTAGTTTCTCTTTCTaGGGTTACACTCTGTGCATT +
Preference number: 4 (lower is better)
Translates to: LANISTKAITDSRKAAEYVSFSF*GYTLCI
Trigger: AATGCACAGAGTGTAACCTCAGAAAGAGAAACTAAC...GTACTCGGCAGCTTTTCTGCTATCTGTTATGGCTTTCGTTGATATGTTTGCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR TCA 90 bp GGGTTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACGAAATAAATAACGAATaGAGACAACCAAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: GFGIQNSPYNQDRKSLEDEINNE*RQPKSS
Trigger: GCTGCTCTTTGGTTGTCTTCATTCGTTATTTATTTC...GTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAACCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp GGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAAGTTCCCACCTATGAGTaGGAATATGCGGTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: GFRILHITKTESHWKTLKVPTYE*EYAVFG
Trigger: ACCAAACACCGCATATTCTCACTCATAGGTGGGAAC...TTTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACAGTTGTAGCAAGCACTTaGAAAGACCCTGCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTVVAST*KDPALS
Trigger: TGAAAGAGCAGGGTCTTTTCAAGTGCTTGCTACAAC...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp GGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAGTTGTAGCAAGCACTTaGAAAGACCCTGCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: GIQNSPYNQDRKSLEDFKVVAST*KDPALS
Trigger: TGAAAGAGCAGGGTCTTTTCAAGTGCTTGCTACAAC...TTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp CTTTCTGGATTACGAACTAAAATCCCTGTAAAATCAATGGATGTGACTCATTGTTCACCACCGGCCGGCTaGCGTATTTATTCACCAAAA +
Preference number: 4 (lower is better)
Translates to: LSGLRTKIPVKSMDVTHCSPPAG*RIYSPK
Trigger: TTTTGGTGAATAAATACGGCAGCCGGCCGGTGGTGA...ACAATGAGTCACATCCATTGATTTTACAGGGATTTTAGTTCGTAATCCAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp AAATATGTTCATACTAATTGTTGCAGAGGCAGAAGCCAAATATATCTCCTCCTCCATGGCCAATCCATTTaGCATGGGTCGCTTCCTATA +
Preference number: 4 (lower is better)
Translates to: KYVHTNCCRGRSQIYLLLHGQSI*HGSLPI
Trigger: TATAGGAAGCGACCCATGGCAAATGGATTGGCCATG...GAGGAGGAGATATATTTGGCTTCTGCCTCTGCAACAATTAGTATGAACATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp GGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAACATGGCCAATCCATTTaGCATGGGTCGCTTCCTATA +
Preference number: 4 (lower is better)
Translates to: GFRILHITKTESHWKTLKHGQSI*HGSLPI
Trigger: TATAGGAAGCGACCCATGGCAAATGGATTGGCCATG...TTTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR GCA 90 bp AAATATGTTCATACTAATTGTTGCAGAGGCAGAAGCCAAATATATCTCCTCCTCGAAAACAGGACTTCCTaGCATGGCCAATCCATTTGC +
Preference number: 4 (lower is better)
Translates to: KYVHTNCCRGRSQIYLLLENRTS*HGQSIC
Trigger: GCAAATGGATTGGCCATGGCAGGAAGTCCTGTTTTC...GAGGAGGAGATATATTTGGCTTCTGCCTCTGCAACAATTAGTATGAACATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp GGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAAGAAAACAGGACTTCCTaGCATGGCCAATCCATTTGC +
Preference number: 4 (lower is better)
Translates to: GFRILHITKTESHWKTLKENRTS*HGQSIC
Trigger: GCAAATGGATTGGCCATGGCAGGAAGTCCTGTTTTC...TTTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR GCA 90 bp GGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAAATCCACCAATTTACCTaGAAGAGGAGGGCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: GFRILHITKTESHWKTLKIHQFT*KRRAKK
Trigger: CTTCTTGGCCCTCCTCTTGCAGGTAAATTGGTGGAT...TTTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR GCA 90 bp TGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGGGGTTTGGGATTCAGTCAGGTTCTAGCAAATaGAGTTCTCTAATAAACACT +
Preference number: 4 (lower is better)
Translates to: CRIRHPPSTYLNQGFGIQSGSSK*SSLINT
Trigger: AGTGTTTATTAGAGAACTGCATTTGCTAGAACCTGA...CTGAATCCCAAACCCCTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTAGATTCTCACTCTATTaGCTAGGCTGGACTGCAAGT +
Preference number: 4 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQIRFSLY*LGWTAS
Trigger: ACTTGCAGTCCAGCCTAGGCAATAGAGTGAGAATCT...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp TATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGGCTGGATGTGGCTGTTaGCAAGGAATGTCTTTTATT +
Preference number: 4 (lower is better)
Translates to: YKGSLCRIRHPPSTYLNQAGCGC*QGMSFI
Trigger: AATAAAAGACATTCCTTGGCAACAGCCACATCCAGC...CTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp TATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGAGTATTTGCCAATTATaGTTAAGGCGGGTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: YKGSLCRIRHPPSTYLNQSICQL*LRRVAG
Trigger: ACCTGCAACCCGCCTTAACCATAATTGGCAAATACT...CTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACAAAAGTTAGCTGGATGTaGCTGTTGCCAAGGAATGTC +
Preference number: 4 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTKVSWM*LLPRNV
Trigger: GACATTCCTTGGCAACAGCCACATCCAGCTAACTTT...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp AATGAAATGTATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACAAAGTTAGCTGGATGTaGCTGTTGCCAAGGAATGTC +
Preference number: 4 (lower is better)
Translates to: NEMYKGSLCRIRHPPSTYKVSWM*LLPRNV
Trigger: GACATTCCTTGGCAACAGCCACATCCAGCTAACTTT...GTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATACATTTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp TATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGGCAGAAGTTTCCTTGTaGACCATTGCTCTTTTTAGA +
Preference number: 4 (lower is better)
Translates to: YKGSLCRIRHPPSTYLNQAEVSL*TIALFR
Trigger: TCTAAAAAGAGCAATGGTTCACAAGGAAACTTCTGC...CTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261187.8
CDS-3UTR TCA 90 bp TATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGAGCCAGCATAATGGATaGAATCCATGCTATTTCACT +
Preference number: 4 (lower is better)
Translates to: YKGSLCRIRHPPSTYLNQSQHNG*NPCYFT
Trigger: AGTGAAATAGCATGGATTTCATCCATTATGCTGGCT...CTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR TCA 90 bp TATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGATGGCTAATTCCCTTTaGCATCTTAAGAGTGACACT +
Preference number: 4 (lower is better)
Translates to: YKGSLCRIRHPPSTYLNQMANSL*HLKSDT
Trigger: AGTGTCACTCTTAAGATGTCAAAGGGAATTAGCCAT...CTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp GGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAAAGGCCAATGAGTCCATaGGCTAAAGGGTTGAAACTT +
Preference number: 4 (lower is better)
Translates to: GFRILHITKTESHWKTLKRPMSP*AKGLKL
Trigger: AAGTTTCAACCCTTTAGCTCATGGACTCATTGGCCT...TTTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp TATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGTGCAAGTGCACTATTTaGATAGAGCTAAGGAGAACT +
Preference number: 4 (lower is better)
Translates to: YKGSLCRIRHPPSTYLNQCKCTI*IELRRT
Trigger: AGTTCTCCTTAGCTCTATTCAAATAGTGCACTTGCA...CTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp TTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTGGTATGATGTATCAGTaGTGTCACTGCATTGATGGA +
Preference number: 4 (lower is better)
Translates to: FGIQNSPYNQDRKSLEDFGMMYQ*CHCIDG
Trigger: TCCATCAATGCAGTGACATCACTGATACATCATACC...AAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACACATTGGTGGCATTTCTaGTCCTCTAGTGGAAATTCA +
Preference number: 4 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTHWWHF*SSSGNS
Trigger: TGAATTTCCACTAGAGGAGCAGAAATGCCACCAATG...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp GGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAACATTGGTGGCATTTCTaGTCCTCTAGTGGAAATTCA +
Preference number: 4 (lower is better)
Translates to: GIQNSPYNQDRKSLEDFKHWWHF*SSSGNS
Trigger: TGAATTTCCACTAGAGGAGCAGAAATGCCACCAATG...TTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTAATGGAGATAAAAGCTaGTCCAACCACAATCCAACC +
Preference number: 4 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQINGDKS*SNHNPT
Trigger: GGTTGGATTGTGGTTGGAGCAGCTTTTATCTCCATT...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp GGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAAATGGAGATAAAAGCTaGTCCAACCACAATCCAACC +
Preference number: 4 (lower is better)
Translates to: GIQNSPYNQDRKSLEDFKNGDKS*SNHNPT
Trigger: GGTTGGATTGTGGTTGGAGCAGCTTTTATCTCCATT...TTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR GCA 90 bp CTTTCTGGATTACGAACTAAAATCCCTGTAAAATCAATGGATGTGACTCATTGTACTTACAGGACCTCCTaGGTACATAACAGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: LSGLRTKIPVKSMDVTHCTYRTS*VHNSQH
Trigger: ATGCTGGCTGTTATGTACGCAGGAGGTCCTGTAAGT...ACAATGAGTCACATCCATTGATTTTACAGGGATTTTAGTTCGTAATCCAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp CTTTCTGGATTACGAACTAAAATCCCTGTAAAATCAATGGATGTGACTCATTGTATGGTTAAGGCGGGTTaGAGGTTGAAGGCTAAACCT +
Preference number: 4 (lower is better)
Translates to: LSGLRTKIPVKSMDVTHCMVKAG*RLKAKP
Trigger: AGGTTTAGCCTTCAACCTGCAACCCGCCTTAACCAT...ACAATGAGTCACATCCATTGATTTTACAGGGATTTTAGTTCGTAATCCAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp AATGAAATGTATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACAGAATTTTCAAGTGCTaGCATTCTTATCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: NEMYKGSLCRIRHPPSTYRIFKC*HSYPRR
Trigger: CCTCCTGGGATAAGAATGGCAGCACTTGAAAATTCT...GTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATACATTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp AAATATGTTCATACTAATTGTTGCAGAGGCAGAAGCCAAATATATCTCCTCCTCAGATTCTCACTCTATTaGCTAGGCTGGACTGCAAGT +
Preference number: 4 (lower is better)
Translates to: KYVHTNCCRGRSQIYLLLRFSLY*LGWTAS
Trigger: ACTTGCAGTCCAGCCTAGGCAATAGAGTGAGAATCT...GAGGAGGAGATATATTTGGCTTCTGCCTCTGCAACAATTAGTATGAACATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTTTGCCACGAATTATCTaGCGTGGCAATCAGGAAATA +
Preference number: 4 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQILPRII*RGNQEI
Trigger: TATTTCCTGATTGCCACGGCAGATAATTCGTGGCAA...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp GGGTTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACATATTATTTCTGATTTaGCACGAATTATCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: GFGIQNSPYNQDRKSLEDILFLI*HELSAV
Trigger: CACGGCAGATAATTCGTGGCAAATCAGAAATAATAT...GTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAACCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp GGGTTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACAATATACATTCAGCCTaGATCGTAGAATACTGTAGT +
Preference number: 4 (lower is better)
Translates to: GFGIQNSPYNQDRKSLEDNIHSA*IVEYCS
Trigger: ACTACAGTATTCTACGATGCAGGCTGAATGTATATT...GTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAACCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp TTGTGTTCTTTAGACAGCGATCCCATAATAACACGTCAATCAACTGATGGAATAATGATACCAACCTCCTaGGTACATAACAGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: LCSLDSDPIITRQSTDGIMIPTS*VHNSQH
Trigger: ATGCTGGCTGTTATGTACGCAGGAGGTTGGTATCAT...TATTCCATCAGTTGATTGACGTGTTATTATGGGATCGCTGTCTAAAGAACACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549465.5
CDS-3UTR CCA 90 bp TTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAGTATTTGCCAATTATaGTTAAGGCGGGTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: FGIQNSPYNQDRKSLEDFSICQL*LRRVAG
Trigger: ACCTGCAACCCGCCTTAACCATAATTGGCAAATACT...AAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp GGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAAGTATTTGCCAATTATaGTTAAGGCGGGTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: GIQNSPYNQDRKSLEDFKSICQL*LRRVAG
Trigger: ACCTGCAACCCGCCTTAACCATAATTGGCAAATACT...TTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp GGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAACCAATCCATTTGCCATaGGTCGCTTCCTATAGAAGT +
Preference number: 4 (lower is better)
Translates to: GFRILHITKTESHWKTLKPIHLP*VASYRS
Trigger: ACTTCTATAGGAAGCGACCCATGGCAAATGGATTGG...TTTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACAAGGGTTCAGATTCTCTaGTCTTCTGCCTTGCATTTT +
Preference number: 4 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTRVQIL*SSALHF
Trigger: AAAATGCAAGGCAGAAGACCAGAGAATCTGAACCCT...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTAGGGTTCAGATTCTCTaGTCTTCTGCCTTGCATTTT +
Preference number: 4 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQIRVQIL*SSALHF
Trigger: AAAATGCAAGGCAGAAGACCAGAGAATCTGAACCCT...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp AATGAAATGTATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACAGGGTTCAGATTCTCTaGTCTTCTGCCTTGCATTTT +
Preference number: 4 (lower is better)
Translates to: NEMYKGSLCRIRHPPSTYRVQIL*SSALHF
Trigger: AAAATGCAAGGCAGAAGACCAGAGAATCTGAACCCT...GTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATACATTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp TATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGTACTCTGTGTACATGTaGGTAAGTATGTGGGAGTAT +
Preference number: 4 (lower is better)
Translates to: YKGSLCRIRHPPSTYLNQYSVYM*VSMWEY
Trigger: ATACTCCCACATACTTACCCACATGTACACAGAGTA...CTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp GGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAACCTCGGGGATCTTTCTaGTTACGTAAACCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: GFRILHITKTESHWKTLKPRGSF*LRKPEF
Trigger: AAACTCAGGTTTACGTAACCAGAAAGATCCCCGAGG...TTTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTGAAGAAGCAGGAGATTaGGATGGGAGATGTAATTTG +
Preference number: 4 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQIEEAGD*DGRCNL
Trigger: CAAATTACATCTCCCATCCCAATCTCCTGCTTCTTC...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp GGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAGTGTGTTCTGTGCTCTaGCGTTCTACTTCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: GIQNSPYNQDRKSLEDFKVCSVL*RSTSEK
Trigger: TTTTTCTGAAGTAGAACGCCAGAGCACAGAACACAC...TTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp AAATATGTTCATACTAATTGTTGCAGAGGCAGAAGCCAAATATATCTCCTCCTCATACGGGTGTCGGTTTaGCTGAATCTAACCAAACAC +
Preference number: 4 (lower is better)
Translates to: KYVHTNCCRGRSQIYLLLIRVSV*LNLTKH
Trigger: GTGTTTGGTTAGATTCAGCCAAACCGACACCCGTAT...GAGGAGGAGATATATTTGGCTTCTGCCTCTGCAACAATTAGTATGAACATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp GGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAAATACGGGTGTCGGTTTaGCTGAATCTAACCAAACAC +
Preference number: 4 (lower is better)
Translates to: GFRILHITKTESHWKTLKIRVSV*LNLTKH
Trigger: GTGTTTGGTTAGATTCAGCCAAACCGACACCCGTAT...TTTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACAGAGTACAGAGGAACATaGACAGGGTTAAACTGCATA +
Preference number: 4 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTEYRGT*TGLNCI
Trigger: TATGCAGTTTAACCCTGTCCATGTTCCTCTGTACTC...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR CAA 72 bp AAGTATTTGCCAATTATGGTTAAGGCGGGTTGCAGGTaGAAGGCTAAACCTAAACCTGTAATGAATCCCATA +
Preference number: 4 (lower is better)
Translates to: KYLPIMVKAGCR*KAKPKPVMNPI
Trigger: TATGGGATTCATTACAGGTTTAGGTTTAGCCTTCAACCTGCAACCCGCCTTAACCATAATTGGCAAATACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
3UTR CAA 72 bp GAAACTTTGACGTTAACATCTTCCGAATGTTTAGATTaGCTCAAGGGTTCAGATTCTCTGGTCTTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: ETLTLTSSECLD*LKGSDSLVFCL
Trigger: AAGGCAGAAGACCAGAGAATCTGAACCCTTGAGCAAATCTAAACATTCGGAAGATGTTAACGTCAAAGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR TCA 90 bp GGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAGTTAGTTTCTCTTTCTaGGGTTACACTCTGTGCATT +
Preference number: 4 (lower is better)
Translates to: GIQNSPYNQDRKSLEDFKVSFSF*GYTLCI
Trigger: AATGCACAGAGTGTAACCTCAGAAAGAGAAACTAAC...TTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR TCA 90 bp TTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTGTTAGTTTCTCTTTCTaGGGTTACACTCTGTGCATT +
Preference number: 4 (lower is better)
Translates to: FGIQNSPYNQDRKSLEDFVSFSF*GYTLCI
Trigger: AATGCACAGAGTGTAACCTCAGAAAGAGAAACTAAC...AAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR TCA 90 bp GGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAATGTAGTGGTATACCCTaGCTTTGCTTCATGATATCT +
Preference number: 4 (lower is better)
Translates to: GIQNSPYNQDRKSLEDFKCSGIP*LCFMIS
Trigger: AGATATCATGAAGCAAAGTCAGGGTATACCACTACA...TTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTTGTAGTGGTATACCCTaGCTTTGCTTCATGATATCT +
Preference number: 4 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQICSGIP*LCFMIS
Trigger: AGATATCATGAAGCAAAGTCAGGGTATACCACTACA...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACAAGACAAAGAGGTGAATaGCAACAAAGATGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTRQRGE*QQRCSE
Trigger: CTCTGAACATCTTTGTTGTCATTCACCTCTTTGTCT...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACATGCAAGTGCACTATTTaGATAGAGCTAAGGAGAACT +
Preference number: 4 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTCKCTI*IELRRT
Trigger: AGTTCTCCTTAGCTCTATTCAAATAGTGCACTTGCA...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTGTGATGTCACTGCATTaGTGGAGACAGAATAATACA +
Preference number: 4 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQIVMSLH*WRQNNT
Trigger: TGTATTATTCTGTCTCCATCAATGCAGTGACATCAC...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp GGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAACAAAGATCATCATTATaGCCTTACGGCTTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: GIQNSPYNQDRKSLEDFKQRSSL*PYGFCS
Trigger: ACTACAGAAGCCGTAAGGTCATAATGATGATCTTTG...TTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp AATGAAATGTATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACCAAAGATCATCATTATaGCCTTACGGCTTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: NEMYKGSLCRIRHPPSTYQRSSL*PYGFCS
Trigger: ACTACAGAAGCCGTAAGGTCATAATGATGATCTTTG...GTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATACATTTCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp GGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAAGACAAGAGAGATTCTaGTTTTATTGCAACCTTCCC +
Preference number: 4 (lower is better)
Translates to: GIQNSPYNQDRKSLEDFKRQERF*FYCNLP
Trigger: GGGAAGGTTGCAATAAAATCAGAATCTCTCTTGTCT...TTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp TACATGTATTTATATTCTCCAGTTAAATCCACCAATTTACCTGCAAGAGGAGGGCATTGGTGGCATTTCTaGTCCTCTAGTGGAAATTCA +
Preference number: 4 (lower is better)
Translates to: YMYLYSPVKSTNLPARGGHWWHF*SSSGNS
Trigger: TGAATTTCCACTAGAGGAGCAGAAATGCCACCAATG...CCCTCCTCTTGCAGGTAAATTGGTGGATTTAACTGGAGAATATAAATACATGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR GCA 90 bp TTCCAATTGTGTTCTTTAGACAGCGATCCCATAATAACACGTCAATCAACTGATAATGGAGATAAAAGCTaGTCCAACCACAATCCAACC +
Preference number: 4 (lower is better)
Translates to: FQLCSLDSDPIITRQSTDNGDKS*SNHNPT
Trigger: GGTTGGATTGTGGTTGGAGCAGCTTTTATCTCCATT...ATCAGTTGATTGACGTGTTATTATGGGATCGCTGTCTAAAGAACACAATTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549465.5
CDS-3UTR GCA 90 bp TTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAACTATACCTACGATTaGAAGTCATACAGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: FGIQNSPYNQDRKSLEDFNYTYD*KSYSAS
Trigger: AGAGGCACTGTATGACTTGCAATCGTAGGTATAGTT...AAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp GGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAAGCTGGATGTGGCTGTTaGCAAGGAATGTCTTTTATT +
Preference number: 4 (lower is better)
Translates to: GFRILHITKTESHWKTLKAGCGC*QGMSFI
Trigger: AATAAAAGACATTCCTTGGCAACAGCCACATCCAGC...TTTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp TTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTTGGACAGGGTTAAACTaGATAATTCAGACAAGAGAG +
Preference number: 4 (lower is better)
Translates to: FGIQNSPYNQDRKSLEDFWTGLN*IIQTRE
Trigger: CTCTCTTGTCTGAATTATGCAGTTTAACCCTGTCCA...AAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp AATGAAATGTATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACGAAATTCAAGTAACCTaGCGACAGGTGTTTAGAAAC +
Preference number: 4 (lower is better)
Translates to: NEMYKGSLCRIRHPPSTYEIQVT*RQVFRN
Trigger: GTTTCTAAACACCTGTCGCCAGGTTACTTGAATTTC...GTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATACATTTCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261187.8
CDS-3UTR CCA 90 bp GGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAACTTAAACCAGGGGTTTaGGATTCAGAATTCTCCATA +
Preference number: 4 (lower is better)
Translates to: GIQNSPYNQDRKSLEDFKLKPGV*DSEFSI
Trigger: TATGGAGAATTCTGAATCCCAAACCCCTGGTTTAAG...TTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp AATGAAATGTATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACTACTCTGTGTACATGTaGGTAAGTATGTGGGAGTAT +
Preference number: 4 (lower is better)
Translates to: NEMYKGSLCRIRHPPSTYYSVYM*VSMWEY
Trigger: ATACTCCCACATACTTACCCACATGTACACAGAGTA...GTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATACATTTCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CCA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTACTATTACAAAAGCCTaGTATCCAGGTGCAATCTCA +
Preference number: 4 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQITITKA*YPGAIS
Trigger: TGAGATTGCACCTGGATACCAGGCTTTTGTAATAGT...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACAACTATTACAAAAGCCTaGTATCCAGGTGCAATCTCA +
Preference number: 4 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTTITKA*YPGAIS
Trigger: TGAGATTGCACCTGGATACCAGGCTTTTGTAATAGT...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp AAATATGTTCATACTAATTGTTGCAGAGGCAGAAGCCAAATATATCTCCTCCTCGAAGAAGCAGGAGATTaGGATGGGAGATGTAATTTG +
Preference number: 4 (lower is better)
Translates to: KYVHTNCCRGRSQIYLLLEEAGD*DGRCNL
Trigger: CAAATTACATCTCCCATCCCAATCTCCTGCTTCTTC...GAGGAGGAGATATATTTGGCTTCTGCCTCTGCAACAATTAGTATGAACATATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp GGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAAGTGTGTTCTGTGCTCTaGCGTTCTACTTCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: GFRILHITKTESHWKTLKVCSVL*RSTSEK
Trigger: TTTTTCTGAAGTAGAACGCCAGAGCACAGAACACAC...TTTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACATTATTTATTTATTTATaGCCCCTGACGTGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTLFIYL*PLTCPR
Trigger: GCGAGGACACGTCAGGGGCCATAAATAAATAAATAA...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547379.6
CDS-3UTR CCA 90 bp GGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAATTATTTATTTATTTATaGCCCCTGACGTGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: GIQNSPYNQDRKSLEDFKLFIYL*PLTCPR
Trigger: GCGAGGACACGTCAGGGGCCATAAATAAATAAATAA...TTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547379.6
ENST00000552432.5
CDS-3UTR TCA 90 bp TTGTGTTCTTTAGACAGCGATCCCATAATAACACGTCAATCAACTGATGGAATAAGCCAGCATAATGGATaGAATCCATGCTATTTCACT +
Preference number: 4 (lower is better)
Translates to: LCSLDSDPIITRQSTDGISQHNG*NPCYFT
Trigger: AGTGAAATAGCATGGATTTCATCCATTATGCTGGCT...TATTCCATCAGTTGATTGACGTGTTATTATGGGATCGCTGTCTAAAGAACACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549465.5
CDS-3UTR TCA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTGAAATAAATAACGAATaGAGACAACCAAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQIEINNE*RQPKSS
Trigger: GCTGCTCTTTGGTTGTCTTCATTCGTTATTTATTTC...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp CTTTCTGGATTACGAACTAAAATCCCTGTAAAATCAATGGATGTGACTCATTGTGGTATGATGTATCAGTaGTGTCACTGCATTGATGGA +
Preference number: 4 (lower is better)
Translates to: LSGLRTKIPVKSMDVTHCGMMYQ*CHCIDG
Trigger: TCCATCAATGCAGTGACATCACTGATACATCATACC...ACAATGAGTCACATCCATTGATTTTACAGGGATTTTAGTTCGTAATCCAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp AATGAAATGTATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACAGAAATATGTACTCTTaGGATTCGGAGGATGAGAAA +
Preference number: 4 (lower is better)
Translates to: NEMYKGSLCRIRHPPSTYRNMYS*DSEDEK
Trigger: TTTCTCATCCTCCGAATCTCAAGAGTACATATTTCT...GTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATACATTTCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp GGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAATCAAAACTGAGGGTTaGGAGGATGAAATGAATTCA +
Preference number: 4 (lower is better)
Translates to: GIQNSPYNQDRKSLEDFKIKTEG*EDEMNS
Trigger: TGAATTCATTTCATCCTCTCAACCCTCAGTTTTGAT...TTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp TTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTATCAAAACTGAGGGTTaGGAGGATGAAATGAATTCA +
Preference number: 4 (lower is better)
Translates to: FGIQNSPYNQDRKSLEDFIKTEG*EDEMNS
Trigger: TGAATTCATTTCATCCTCTCAACCCTCAGTTTTGAT...AAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACACTTTGGTCATTAAAATaGTTGTCGACATTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTLWSLK*LSTFPG
Trigger: TCCTGGAAATGTCGACAATCATTTTAATGACCAAAG...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp GGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAAAGACAAGAGAGATTCTaGTTTTATTGCAACCTTCCC +
Preference number: 4 (lower is better)
Translates to: GFRILHITKTESHWKTLKRQERF*FYCNLP
Trigger: GGGAAGGTTGCAATAAAATCAGAATCTCTCTTGTCT...TTTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp AATGAAATGTATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACCTCGCTGTCAACGGGTaGATGGAATTATTTATTTAT +
Preference number: 4 (lower is better)
Translates to: NEMYKGSLCRIRHPPSTYLAVNG*MELFIY
Trigger: ATAAATAAATAATTCCATTCACCCGTTGACAGCGAG...GTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATACATTTCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547379.6
ENST00000552432.5
CDS-3UTR GCA 90 bp CTTTCTGGATTACGAACTAAAATCCCTGTAAAATCAATGGATGTGACTCATTGTAATGGAGATAAAAGCTaGTCCAACCACAATCCAACC +
Preference number: 4 (lower is better)
Translates to: LSGLRTKIPVKSMDVTHCNGDKS*SNHNPT
Trigger: GGTTGGATTGTGGTTGGAGCAGCTTTTATCTCCATT...ACAATGAGTCACATCCATTGATTTTACAGGGATTTTAGTTCGTAATCCAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp GGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAGTTCATACTAATTGTTaGAGAGGCAGAAGCCAAATA +
Preference number: 4 (lower is better)
Translates to: GIQNSPYNQDRKSLEDFKVHTNC*RGRSQI
Trigger: TATTTGGCTTCTGCCTCTGCAACAATTAGTATGAAC...TTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp TTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTTATTTTATCTTCCTTTaGTTCTCTGGCCTCTATTGG +
Preference number: 4 (lower is better)
Translates to: FGIQNSPYNQDRKSLEDFYFIFL*FSGLYW
Trigger: CCAATAGAGGCCAGAGAAGCAAAGGAAGATAAAATA...AAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp GGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAATATTTTATCTTCCTTTaGTTCTCTGGCCTCTATTGG +
Preference number: 4 (lower is better)
Translates to: GIQNSPYNQDRKSLEDFKYFIFL*FSGLYW
Trigger: CCAATAGAGGCCAGAGAAGCAAAGGAAGATAAAATA...TTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp CTTTCTGGATTACGAACTAAAATCCCTGTAAAATCAATGGATGTGACTCATTGTTTGCCACGAATTATCTaGCGTGGCAATCAGGAAATA +
Preference number: 4 (lower is better)
Translates to: LSGLRTKIPVKSMDVTHCLPRII*RGNQEI
Trigger: TATTTCCTGATTGCCACGGCAGATAATTCGTGGCAA...ACAATGAGTCACATCCATTGATTTTACAGGGATTTTAGTTCGTAATCCAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACACCCTGCTCTTTCATCTaGAATATCAGGAATTACTAT +
Preference number: 4 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTPCSFI*NIRNYY
Trigger: ATAGTAATTCCTGATATTGCAGATGAAAGAGCAGGG...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTCCCTGCTCTTTCATCTaGAATATCAGGAATTACTAT +
Preference number: 4 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQIPCSFI*NIRNYY
Trigger: ATAGTAATTCCTGATATTGCAGATGAAAGAGCAGGG...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp GGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAATGGACAGGGTTAAACTaGATAATTCAGACAAGAGAG +
Preference number: 4 (lower is better)
Translates to: GFRILHITKTESHWKTLKWTGLN*IIQTRE
Trigger: CTCTCTTGTCTGAATTATGCAGTTTAACCCTGTCCA...TTTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp AATGAAATGTATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACAGGTGTTTAGAAACATaGTCTTCCATTTCACCAAGA +
Preference number: 4 (lower is better)
Translates to: NEMYKGSLCRIRHPPSTYRCLET*SSISPR
Trigger: TCTTGGTGAAATGGAAGACCATGTTTCTAAACACCT...GTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATACATTTCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261187.8
CDS-3UTR CCA 90 bp AAATATGTTCATACTAATTGTTGCAGAGGCAGAAGCCAAATATATCTCCTCCTCTACTCATCAATTCCTTaGTCTTTAGCATATGGAGCC +
Preference number: 4 (lower is better)
Translates to: KYVHTNCCRGRSQIYLLLYSSIP*SLAYGA
Trigger: GGCTCCATATGCTAAAGACCAAGGAATTGATGAGTA...GAGGAGGAGATATATTTGGCTTCTGCCTCTGCAACAATTAGTATGAACATATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp GGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAATGCTCTGAATGGTTGTaGTTAGAAATCTTGTTGGTA +
Preference number: 4 (lower is better)
Translates to: GIQNSPYNQDRKSLEDFKCSEWL*LEILLV
Trigger: TACCAACAAGATTTCTAACCACAACCATTCAGAGCA...TTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACATGCTCTGAATGGTTGTaGTTAGAAATCTTGTTGGTA +
Preference number: 4 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTCSEWL*LEILLV
Trigger: TACCAACAAGATTTCTAACCACAACCATTCAGAGCA...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
3UTR CAA 72 bp TCTCTTTCTGAGGTTACACTCTGTGCATTTGAAACTTaGACGTTAACATCTTCCGAATGTTTAGATTTGCTC +
Preference number: 4 (lower is better)
Translates to: SLSEVTLCAFET*TLTSSECLDLL
Trigger: GAGCAAATCTAAACATTCGGAAGATGTTAACGTCAAAGTTTCAAATGCACAGAGTGTAACCTCAGAAAGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR TCA 90 bp CTTTCTGGATTACGAACTAAAATCCCTGTAAAATCAATGGATGTGACTCATTGTCTCTGTATTCAGGAGTaGTTCAAATTCCCAGATGTT +
Preference number: 4 (lower is better)
Translates to: LSGLRTKIPVKSMDVTHCLCIQE*FKFPDV
Trigger: AACATCTGGGAATTTGAATCACTCCTGAATACAGAG...ACAATGAGTCACATCCATTGATTTTACAGGGATTTTAGTTCGTAATCCAGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp AAATATGTTCATACTAATTGTTGCAGAGGCAGAAGCCAAATATATCTCCTCCTCCTTTGGTCATTAAAATaGTTGTCGACATTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: KYVHTNCCRGRSQIYLLLLWSLK*LSTFPG
Trigger: TCCTGGAAATGTCGACAATCATTTTAATGACCAAAG...GAGGAGGAGATATATTTGGCTTCTGCCTCTGCAACAATTAGTATGAACATATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR TCA 90 bp GGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAACTCGCTGTCAACGGGTaGATGGAATTATTTATTTAT +
Preference number: 4 (lower is better)
Translates to: GFRILHITKTESHWKTLKLAVNG*MELFIY
Trigger: ATAAATAAATAATTCCATTCACCCGTTGACAGCGAG...TTTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547379.6
ENST00000552432.5
CDS-3UTR TCA 90 bp TACATGTATTTATATTCTCCAGTTAAATCCACCAATTTACCTGCAAGAGGAGGGGAATCCTCAAGGATGTaGAGATCAAAAAGCTTTCAA +
Preference number: 4 (lower is better)
Translates to: YMYLYSPVKSTNLPARGGESSRM*RSKSFQ
Trigger: TTGAAAGCTTTTTGATCTTCACATCCTTGAGGATTC...CCCTCCTCTTGCAGGTAAATTGGTGGATTTAACTGGAGAATATAAATACATGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR GCA 90 bp AATGAAATGTATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACGTCTACTTACAATCCTaGCAACTAGGATTTTACTTT +
Preference number: 4 (lower is better)
Translates to: NEMYKGSLCRIRHPPSTYVYLQS*QLGFYF
Trigger: AAAGTAAAATCCTAGTTGGCAGGATTGTAAGTAGAC...GTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATACATTTCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACAGTCTACTTACAATCCTaGCAACTAGGATTTTACTTT +
Preference number: 4 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTVYLQS*QLGFYF
Trigger: AAAGTAAAATCCTAGTTGGCAGGATTGTAAGTAGAC...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACAATAGGTCAGGAAAAGTaGAAACACAATGTTCTATTC +
Preference number: 4 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTIGQEK*KHNVLF
Trigger: GAATAGAACATTGTGTTTGCACTTTTCCTGACCTAT...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp GGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAATAGGTCAGGAAAAGTaGAAACACAATGTTCTATTC +
Preference number: 4 (lower is better)
Translates to: GIQNSPYNQDRKSLEDFKIGQEK*KHNVLF
Trigger: GAATAGAACATTGTGTTTGCACTTTTCCTGACCTAT...TTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp AATGAAATGTATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACTCAGGTTCTAGCAAATaGAGTTCTCTAATAAACACT +
Preference number: 4 (lower is better)
Translates to: NEMYKGSLCRIRHPPSTYSGSSK*SSLINT
Trigger: AGTGTTTATTAGAGAACTGCATTTGCTAGAACCTGA...GTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATACATTTCATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp GGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAACTCAAACATGAGTTCTaGATATGGTTGTGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: GFRILHITKTESHWKTLKLKHEF*IWLCRN
Trigger: ATTTCTGCACAACCATATGCAGAACTCATGTTTGAG...TTTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp TTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTATATTATTTCTGATTTaGCACGAATTATCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: FGIQNSPYNQDRKSLEDFILFLI*HELSAV
Trigger: CACGGCAGATAATTCGTGGCAAATCAGAAATAATAT...AAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACAAATATACATTCAGCCTaGATCGTAGAATACTGTAGT +
Preference number: 4 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTNIHSA*IVEYCS
Trigger: ACTACAGTATTCTACGATGCAGGCTGAATGTATATT...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTTTAGTCGTAGTCAGATaGAGTATTCATAACAGTAAC +
Preference number: 4 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQILVVVR*SIHNSN
Trigger: GTTACTGTTATGAATACTCCATCTGACTACGACTAA...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp GGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAAGCTTTTAAAGTTTCCTaGCTTAGTTATGTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: GFRILHITKTESHWKTLKAFKVS*LSYVQR
Trigger: CCTTTGGACATAACTAAGCCAGGAAACTTTAAAAGC...TTTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp GGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAATTAGTCGTAGTCAGATaGAGTATTCATAACAGTAAC +
Preference number: 4 (lower is better)
Translates to: GFRILHITKTESHWKTLKLVVVR*SIHNSN
Trigger: GTTACTGTTATGAATACTCCATCTGACTACGACTAA...TTTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp CTTTCTGGATTACGAACTAAAATCCCTGTAAAATCAATGGATGTGACTCATTGTGCTTTTAAAGTTTCCTaGCTTAGTTATGTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LSGLRTKIPVKSMDVTHCAFKVS*LSYVQR
Trigger: CCTTTGGACATAACTAAGCCAGGAAACTTTAAAAGC...ACAATGAGTCACATCCATTGATTTTACAGGGATTTTAGTTCGTAATCCAGAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CCA 90 bp AAATATGTTCATACTAATTGTTGCAGAGGCAGAAGCCAAATATATCTCCTCCTCCACTTTTCTCAATCTTaGAAAGATTCTGCTAAAGCA +
Preference number: 4 (lower is better)
Translates to: KYVHTNCCRGRSQIYLLLHFSQS*KDSAKA
Trigger: TGCTTTAGCAGAATCTTTCCAAGATTGAGAAAAGTG...GAGGAGGAGATATATTTGGCTTCTGCCTCTGCAACAATTAGTATGAACATATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR GCA 90 bp CTTTCTGGATTACGAACTAAAATCCCTGTAAAATCAATGGATGTGACTCATTGTTTCTCCTCAAGACTATaGTATGGCAATAATTTCTTG +
Preference number: 4 (lower is better)
Translates to: LSGLRTKIPVKSMDVTHCFSSRL*YGNNFL
Trigger: CAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAA...ACAATGAGTCACATCCATTGATTTTACAGGGATTTTAGTTCGTAATCCAGAAAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CAA 90 bp TGTTGCTCAGTGAAGCTCCTCTCTGCCTTGCTCGCTCTCCGGTTGTCCATGTGCAAGCTCCTCTCTGCCTaGCTCGCTCTCCGGTTGTCC +
Preference number: 5 (lower is better)
Translates to: CCSVKLLSALLALRLSMCKLLSA*LALRLS
Trigger: GGACAACCGGAGAGCGAGCAAGGCAGAGAGGAGCTT...GCACATGGACAACCGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549305.1
ENST00000551877.5
CDS-3UTR CAA 90 bp GGTGCCATGGAGGGCATGTTGATGGTGGGAGGCAGACAGATTCCTGGGCAGAAAAAGCTCCTCTCTGCCTaGCTCGCTCTCCGGTTGTCC +
Preference number: 5 (lower is better)
Translates to: GAMEGMLMVGGRQIPGQKKLLSA*LALRLS
Trigger: GGACAACCGGAGAGCGAGCAAGGCAGAGAGGAGCTT...TTTCTGCCCAGGAATCTGTCTGCCTCCCACCATCAACATGCCCTCCATGGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550062.5
CDS-3UTR CAA 90 bp TTGTTGCTCAGTGAAGCTCCTCTCTGCCTTGCTCGCTCTCCGGTTGTCCATGTGAAGCTCCTCTCTGCCTaGCTCGCTCTCCGGTTGTCC +
Preference number: 5 (lower is better)
Translates to: LLLSEAPLCLARSPVVHVKLLSA*LALRLS
Trigger: GGACAACCGGAGAGCGAGCAAGGCAGAGAGGAGCTT...CACATGGACAACCGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549305.1
ENST00000551877.5
CDS TCA 90 bp CTTGCTCGCTCTCCGGTTGTCCATGTGCTTCATTCTTCCTGGAGGTaGGATGGGAGCTTGGGACCTGCTCCTGCGTACATAACAGCCAGC +
Preference number: 5 (lower is better)
Translates to: LARSPVVHVLHSSWR*DGSLGPAPAYITAS
Trigger: GCTGGCTGTTATGTACGCAGGAGCAGGTCCCAAGCTCCCATCTCACCTCCAGGAAGAATGAAGCACATGGACAACCGGAGAGCGAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549305.1
CDS GCA 90 bp TCAGTGAAGCTCCTCTCTGCCTTGCTCGCTCTCCGGTTGTCCATGTaGTTCATTCTTCCTGGAGGTGAGATGGGAGCTTGGGACCTCCTG +
Preference number: 5 (lower is better)
Translates to: SVKLLSALLALRLSM*FILPGGEMGAWDLL
Trigger: CAGGAGGTCCCAAGCTCCCATCTCACCTCCAGGAAGAATGAAGCACATGGACAACCGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551877.5
CDS GCA 90 bp TCAGTGAAGCTCCTCTCTGCCTTGCTCGCTCTCCGGTTGTCCATGTaGTTCATTCTTCCTGGAGGTGAGATGGGAGCTTGGGACCTGCTC +
Preference number: 5 (lower is better)
Translates to: SVKLLSALLALRLSM*FILPGGEMGAWDLL
Trigger: GAGCAGGTCCCAAGCTCCCATCTCACCTCCAGGAAGAATGAAGCACATGGACAACCGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549305.1
CDS CCA 90 bp TATCACATCTTAAGATTGACTCTTTATCTGGTCTCTGGCGCAGGGTaGGCGCTGCAGCCCTCCGTTCCCAGCAAACCGCAGCCGATTCGC +
Preference number: 5 (lower is better)
Translates to: YHILRLTLYLVSGAG*ALQPSVPSKPQPIR
Trigger: GCGAATCGGCTGCGGTTTGCTGGGAACGGAGGGCTGCAGCGCCCACCCTGCGCCAGAGACCAGATAAAGAGTCAATCTTAAGATGTGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000547379.6
ENST00000549465.5
ENST00000552432.5
CDS-3UTR CAA 90 bp ATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCACCTAGCATTAGGGTGGGGCACTTGGCATaGGTGGCATTTCTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: IHVPCWCAAPTNSSPSIRVGHLA*VAFLLL
Trigger: GAGGAGCAGAAATGCCACCAATGCCAAGTGCCCCAC...CCTAATGCTAGGTGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CAA 90 bp TTTTGTTGCTCAGTGAAGCTCCTCTCTGCCTTGCTCGCTCTCCGGTTGTCCATGGCACAGGTGGGGCACTaGGCATTGGTGGCATTTCTG +
Preference number: 5 (lower is better)
Translates to: FCCSVKLLSALLALRLSMAQVGH*ALVAFL
Trigger: CAGAAATGCCACCAATGCCAAGTGCCCCACCTGTGC...CATGGACAACCGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549305.1
ENST00000551877.5
CDS-3UTR CAA 90 bp CTGGGCAGAAAGGGGTGGATCCTTGGTGAAACCCCACCTTTAATCCAGAGACAGGCACAGGTGGGGCACTaGGCATTGGTGGCATTTCTG +
Preference number: 5 (lower is better)
Translates to: LGRKGWILGETPPLIQRQAQVGH*ALVAFL
Trigger: CAGAAATGCCACCAATGCCAAGTGCCCCACCTGTGC...CTGTCTCTGGATTAAAGGTGGGGTTTCACCAAGGATCCACCCCTTTCTGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550062.5
CDS TCA 90 bp CTTGCTCGCTCTCCGGTTGTCCATGTGCTTCATTCTTCCTGGAGGTaGGATGGGAGCTTGGGACCTCCTGCGTACATAACAGCCAGCATA +
Preference number: 5 (lower is better)
Translates to: LARSPVVHVLHSSWR*DGSLGPPAYITASI
Trigger: TATGCTGGCTGTTATGTACGCAGGAGGTCCCAAGCTCCCATCTCACCTCCAGGAAGAATGAAGCACATGGACAACCGGAGAGCGAGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551877.5
CDS CCA 90 bp ATCCTTGGTGAAACCCCACCTTTAATCCAGAGACAGCCTGAGGCCTaGGGGTCAGACTGTCAGTTCTGGGTAGTCGTGGCTCTCCTAAGA +
Preference number: 5 (lower is better)
Translates to: ILGETPPLIQRQPEA*GSDCQFWVVVALLR
Trigger: TCTTAGGAGAGCCACGACTACCCAGAACTGACAGTCTGACCCCCAGGCCTCAGGCTGTCTCTGGATTAAAGGTGGGGTTTCACCAAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550062.5
CDS-3UTR CAA 90 bp AGACAGCATAATAAGCCTCCTGCTATCACCACCGGCCGGCTGCCGTATTTATTCGTGGGGCACTTGGCATaGGTGGCATTTCTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: RQHNKPPAITTGRLPYLFVGHLA*VAFLLL
Trigger: GAGGAGCAGAAATGCCACCAATGCCAAGTGCCCCAC...GAATAAATACGGCAGCCGGCCGGTGGTGATAGCAGGAGGCTTATTATGCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CAA 90 bp GCTCTCCTAAGAGTTGTTTTGTTGCTCAGTGAAGCTCCTCTCTGCCTTGCTCGCGTGGGGCACTTGGCATaGGTGGCATTTCTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: ALLRVVLLLSEAPLCLARVGHLA*VAFLLL
Trigger: GAGGAGCAGAAATGCCACCAATGCCAAGTGCCCCAC...GCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACAAAACAACTCTTAGGAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549305.1
ENST00000551877.5
CDS CCA 90 bp TCCTCCATCTGGAGGTGGATGCACAGGTGGGGCACTTGGCATTGGTaGCATTTCTGCTCCTCTAGTGGAAATTCAAGTAACCTGGCGACA +
Preference number: 5 (lower is better)
Translates to: SSIWRWMHRWGTWHW*HFCSSSGNSSNLAT
Trigger: TGTCGCCAGGTTACTTGAATTTCCACTAGAGGAGCAGAAATGCCACCAATGCCAAGTGCCCCACCTGTGCATCCACCTCCAGATGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261187.8
ENST00000546459.5
ENST00000547801.1
ENST00000549033.5
ENST00000549305.1
ENST00000549588.5
ENST00000549928.5
ENST00000551877.5
ENST00000552405.5
CDS CCA 90 bp CCAACCCCATCCTCCATCTGGAGGTGGATGCACAGGTGGGGCACTTaGCATTGGTGGCATTTCTGCTCCTCTAGTGGAAATTCAAGTAAC +
Preference number: 5 (lower is better)
Translates to: PTPSSIWRWMHRWGT*HWWHFCSSSGNSSN
Trigger: GTTACTTGAATTTCCACTAGAGGAGCAGAAATGCCACCAATGCCAAGTGCCCCACCTGTGCATCCACCTCCAGATGGAGGATGGGGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000261187.8
ENST00000546459.5
ENST00000547379.6
ENST00000547801.1
ENST00000548610.5
ENST00000549033.5
ENST00000549305.1
ENST00000549465.5
ENST00000549588.5
ENST00000549928.5
ENST00000550062.5
ENST00000551877.5
ENST00000552024.5
ENST00000552405.5
CDS CCA 90 bp AACCACAATCCAACCCCATCCTCCATCTGGAGGTGGATGCACAGGTaGGGCACTTGGCATTGGTGGCATTTCTGCTCCTCTAGTGGAAAT +
Preference number: 5 (lower is better)
Translates to: NHNPTPSSIWRWMHR*GTWHWWHFCSSSGN
Trigger: ATTTCCACTAGAGGAGCAGAAATGCCACCAATGCCAAGTGCCCCACCTGTGCATCCACCTCCAGATGGAGGATGGGGTTGGATTGTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000261187.8
ENST00000546459.5
ENST00000547379.6
ENST00000547801.1
ENST00000548610.5
ENST00000549033.5
ENST00000549305.1
ENST00000549465.5
ENST00000549588.5
ENST00000549928.5
ENST00000550062.5
ENST00000551877.5
ENST00000552024.5
ENST00000552405.5
CDS CCA 90 bp TCGCTCTCCGGTTGTCCATGTGCTTCATTCTTCCTGGAGGTGAGATaGGAGCTTGGGACCTCCTGCGTACATAACAGCCAGCATAATGGA +
Preference number: 5 (lower is better)
Translates to: SLSGCPCASFFLEVR*ELGTSCVHNSQHNG
Trigger: TCCATTATGCTGGCTGTTATGTACGCAGGAGGTCCCAAGCTCCCATCTCACCTCCAGGAAGAATGAAGCACATGGACAACCGGAGAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551877.5
CDS CCA 90 bp TCCTCCATCTGGAGGTGGATGCACAGGTGGGGCACTTGGCATTGGTaGCATTTCTGCTCCTCTAGTGGAAATTCAAGTAACCTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: SSIWRWMHRWGTWHW*HFCSSSGNSSNLRQ
Trigger: CTGCCTCAGGTTACTTGAATTTCCACTAGAGGAGCAGAAATGCCACCAATGCCAAGTGCCCCACCTGTGCATCCACCTCCAGATGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550062.5
CDS CCA 90 bp TCGCTCTCCGGTTGTCCATGTGCTTCATTCTTCCTGGAGGTGAGATaGGAGCTTGGGACCTGCTCCTGCGTACATAACAGCCAGCATAAT +
Preference number: 5 (lower is better)
Translates to: SLSGCPCASFFLEVR*ELGTCSCVHNSQHN
Trigger: ATTATGCTGGCTGTTATGTACGCAGGAGCAGGTCCCAAGCTCCCATCTCACCTCCAGGAAGAATGAAGCACATGGACAACCGGAGAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549305.1
CDS-3UTR CAA 90 bp CTCCTAAGAGTTGTTTTGTTGCTCAGTGAAGCTCCTCTCTGCCTTGCTCGCTCTGCACAGGTGGGGCACTaGGCATTGGTGGCATTTCTG +
Preference number: 5 (lower is better)
Translates to: LLRVVLLLSEAPLCLARSAQVGH*ALVAFL
Trigger: CAGAAATGCCACCAATGCCAAGTGCCCCACCTGTGC...AGAGCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACAAAACAACTCTTAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549305.1
ENST00000551877.5
CDS TCA 90 bp TCCGTTCCCAGCAAACCGCAGCCGATTCGCCTCGCTGTCAACGGGTaGATGGAATTATTTATTTATTTATGGCCCCTGACGTGTCCTCGC +
Preference number: 5 (lower is better)
Translates to: SVPSKPQPIRLAVNG*MELFIYLWPLTCPR
Trigger: GCGAGGACACGTCAGGGGCCATAAATAAATAAATAATTCCATTCACCCGTTGACAGCGAGGCGAATCGGCTGCGGTTTGCTGGGAACGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547379.6
ENST00000552432.5
CDS GCA 90 bp GTGGCTCTCCTAAGAGTTGTTTTGTTGCTCAGTGAAGCTCCTCTCTaGCTTGCTCGCTCTCCGGTTGTCCATGTGCTTCATTCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: VALLRVVLLLSEAPL*LARSPVVHVLHSSW
Trigger: CCAGGAAGAATGAAGCACATGGACAACCGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACAAAACAACTCTTAGGAGAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549305.1
ENST00000551877.5
CDS GCA 90 bp GTGGCTCTCCTAAGAGTTGTTTTGTTGCTCAGTGAAGCTCCTCTCTaGCTTGCTCGCTCTCCGGTTGTCCATGTGCTTCATTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: VALLRVVLLLSEAPL*LARSPVVHVLHSSS
Trigger: GGAGGAAGAATGAAGCACATGGACAACCGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACAAAACAACTCTTAGGAGAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550062.5
CDS-3UTR CAA 90 bp ATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCACCTAGCATTAGGGCATCATGGCTGACTTaGAGAAGAATGCAGCGCCTT +
Preference number: 5 (lower is better)
Translates to: IHVPCWCAAPTNSSPSIRASWLT*RRMQRL
Trigger: AAGGCGCTGCATTCTTCTCAAAGTCAGCCATGATGC...CCTAATGCTAGGTGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS GCA 90 bp TCAGTGAAGCTCCTCTCTGCCTTGCTCGCTCTCCGGTTGTCCATGTaGTTCATTCTTCCTCCTGCGTACATAACAGCCAGCATAATGGAT +
Preference number: 5 (lower is better)
Translates to: SVKLLSALLALRLSM*FILPPAYITASIMD
Trigger: ATCCATTATGCTGGCTGTTATGTACGCAGGAGGAAGAATGAAGCACATGGACAACCGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACTGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550062.5
CDS-3UTR CAA 90 bp CATCTCCTTTTCCCAGATTCATCAGAGGAGTCATTATGTACGGCAGCTAGGCATGTGGGGCACTTGGCATaGGTGGCATTTCTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: HLLFPDSSEESLCTAARHVGHLA*VAFLLL
Trigger: GAGGAGCAGAAATGCCACCAATGCCAAGTGCCCCAC...ATGCCTAGCTGCCGTACATAATGACTCCTCTGATGAATCTGGGAAAAGGAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546459.5
CDS-3UTR CAA 90 bp TCCCAGATTCATCAGAGGAGTCATTATGTACGGCAGCTAGGCATGATCCTGATTGCACAGGTGGGGCACTaGGCATTGGTGGCATTTCTG +
Preference number: 5 (lower is better)
Translates to: SQIHQRSHYVRQLGMILIAQVGH*ALVAFL
Trigger: CAGAAATGCCACCAATGCCAAGTGCCCCACCTGTGC...AATCAGGATCATGCCTAGCTGCCGTACATAATGACTCCTCTGATGAATCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546459.5
CDS-3UTR CAA 90 bp CAATTTACCTGCAAGAGGAGGGCCAAGAAGAACTGGGCCACACTCCACAATTGTCCATGGCCAATCCATTaGCCATGGGTCGCTTCCTAT +
Preference number: 5 (lower is better)
Translates to: QFTCKRRAKKNWATLHNCPWPIH*PWVASY
Trigger: ATAGGAAGCGACCCATGGCAAATGGATTGGCCATGG...ACAATTGTGGAGTGTGGCCCAGTTCTTCTTGGCCCTCCTCTTGCAGGTAAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CAA 90 bp ATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCACCTAGCATTAGGAGACTTAGAAGTGGTTaGATTGGGTCCAAGGGGTCT +
Preference number: 5 (lower is better)
Translates to: IHVPCWCAAPTNSSPSIRRLRSG*IGSKGS
Trigger: AGACCCCTTGGACCCAATCAAACCACTTCTAAGTCT...CCTAATGCTAGGTGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CAA 90 bp CCAAAACACTACTTACAGGACTTCACTGAAGTCCTGAGCCTCTTAAAGTCACCCCGGCACTGGAAAATCTaGGTGCACCCACGAGGTCCA +
Preference number: 5 (lower is better)
Translates to: PKHYLQDFTEVLSLLKSPRHWKI*VHPRGP
Trigger: TGGACCTCGTGGGTGCACCAAGATTTTCCAGTGCCG...GGGTGACTTTAAGAGGCTCAGGACTTCAGTGAAGTCCTGTAAGTAGTGTTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000549033.5
CDS-3UTR CAA 90 bp ATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCACCTAGCATTAGGCATACGGGTGTCGGTTaGGCTGAATCTAACCAAACA +
Preference number: 5 (lower is better)
Translates to: IHVPCWCAAPTNSSPSIRHTGVG*AESNQT
Trigger: TGTTTGGTTAGATTCAGCCAAACCGACACCCGTATG...CCTAATGCTAGGTGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS GCA 90 bp TTCCAAGACAGCATAATAAGCCTCCTGCTATCACCACCGGCCGGCTaGCGTATTTATTCACCAAAACACTACTTACAGGACCTCCTGCGT +
Preference number: 5 (lower is better)
Translates to: FQDSIISLLLSPPAG*RIYSPKHYLQDLLR
Trigger: ACGCAGGAGGTCCTGTAAGTAGTGTTTTGGTGAATAAATACGGCAGCCGGCCGGTGGTGATAGCAGGAGGCTTATTATGCTGTCTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000548610.5
ENST00000552024.5
ENST00000552432.5
CDS CCA 90 bp TCCTCCATCTGGAGGTGGATGCACAGGTGGGGCACTTGGCATTGGTaGCATTTCTGCTCCTCTAGTGGAAATTCAAGTAACCTGAATAGA +
Preference number: 5 (lower is better)
Translates to: SSIWRWMHRWGTWHW*HFCSSSGNSSNLNR
Trigger: TCTATTCAGGTTACTTGAATTTCCACTAGAGGAGCAGAAATGCCACCAATGCCAAGTGCCCCACCTGTGCATCCACCTCCAGATGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548610.5
CDS CCA 90 bp TCCTCCATCTGGAGGTGGATGCACAGGTGGGGCACTTGGCATTGGTaGCATTTCTGCTCCTCTAGTGGAAATTCAAGTAACAGAGTAACT +
Preference number: 5 (lower is better)
Translates to: SSIWRWMHRWGTWHW*HFCSSSGNSSNRVT
Trigger: AGTTACTCTGTTACTTGAATTTCCACTAGAGGAGCAGAAATGCCACCAATGCCAAGTGCCCCACCTGTGCATCCACCTCCAGATGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547379.6
ENST00000549465.5
CDS CCA 90 bp TCCTCCATCTGGAGGTGGATGCACAGGTGGGGCACTTGGCATTGGTaGCATTTCTGCTCCTCTAGTGGAAATTCAAGTAACGTGTTGATA +
Preference number: 5 (lower is better)
Translates to: SSIWRWMHRWGTWHW*HFCSSSGNSSNVLI
Trigger: TATCAACACGTTACTTGAATTTCCACTAGAGGAGCAGAAATGCCACCAATGCCAAGTGCCCCACCTGTGCATCCACCTCCAGATGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552024.5
CDS-3UTR CAA 90 bp GGGTTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACGCACAGGTGGGGCACTaGGCATTGGTGGCATTTCTG +
Preference number: 5 (lower is better)
Translates to: GFGIQNSPYNQDRKSLEDAQVGH*ALVAFL
Trigger: CAGAAATGCCACCAATGCCAAGTGCCCCACCTGTGC...GTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CAA 90 bp ATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCACCTAGCATTAGGGAAGAATGCAGCGCCTaGCAAGTGCACTATTTGAAT +
Preference number: 5 (lower is better)
Translates to: IHVPCWCAAPTNSSPSIREECSA*QVHYLN
Trigger: ATTCAAATAGTGCACTTGCAAGGCGCTGCATTCTTC...CCTAATGCTAGGTGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS GCA 90 bp TTCCAAGACAGCATAATAAGCCTCCTGCTATCACCACCGGCCGGCTaGCGTATTTATTCACCAAAACACTACTTACAGGACCTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: FQDSIISLLLSPPAG*RIYSPKHYLQDLRD
Trigger: GTCTCTGAGGTCCTGTAAGTAGTGTTTTGGTGAATAAATACGGCAGCCGGCCGGTGGTGATAGCAGGAGGCTTATTATGCTGTCTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548444.1
CDS-3UTR CAA 90 bp AAAGCTGCCGAGTACTCATCAATTCCTTGGTCTTTAGCATATGGAGCCAAGAATGCACAGGTGGGGCACTaGGCATTGGTGGCATTTCTG +
Preference number: 5 (lower is better)
Translates to: KAAEYSSIPWSLAYGAKNAQVGH*ALVAFL
Trigger: CAGAAATGCCACCAATGCCAAGTGCCCCACCTGTGC...ATTCTTGGCTCCATATGCTAAAGACCAAGGAATTGATGAGTACTCGGCAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CAA 90 bp ATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCACCTAGCATTAGGGTACTCATCAATTCCTaGGTCTTTAGCATATGGAGC +
Preference number: 5 (lower is better)
Translates to: IHVPCWCAAPTNSSPSIRVLINS*VFSIWS
Trigger: GCTCCATATGCTAAAGACCAAGGAATTGATGAGTAC...CCTAATGCTAGGTGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CAA 90 bp TGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGGGGTTTGGGATTCAGAGAGTCCCAGAGTCTTaGGTTCCCCAGATCACCTTG +
Preference number: 5 (lower is better)
Translates to: CRIRHPPSTYLNQGFGIQRVPES*VPQITL
Trigger: CAAGGTGATCTGGGGAACCAAAGACTCTGGGACTCT...CTGAATCCCAAACCCCTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CAA 90 bp TGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGGGGTTTGGGATTCAGAAGGCGGGTTGCAGGTaGAAGGCTAAACCTAAACCT +
Preference number: 5 (lower is better)
Translates to: CRIRHPPSTYLNQGFGIQKAGCR*KAKPKP
Trigger: AGGTTTAGGTTTAGCCTTCAACCTGCAACCCGCCTT...CTGAATCCCAAACCCCTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CAA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACAGTGGGGCACTTGGCATaGGTGGCATTTCTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTVGHLA*VAFLLL
Trigger: GAGGAGCAGAAATGCCACCAATGCCAAGTGCCCCAC...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CAA 90 bp TTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTGCACAGGTGGGGCACTaGGCATTGGTGGCATTTCTG +
Preference number: 5 (lower is better)
Translates to: FGIQNSPYNQDRKSLEDFAQVGH*ALVAFL
Trigger: CAGAAATGCCACCAATGCCAAGTGCCCCACCTGTGC...AAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CAA 90 bp CCTTTCCTTTGCAAGCAATCTATAGTTGATAGCATTGCCAATGAGCAGCCACACAAGGCGGGTTGCAGGTaGAAGGCTAAACCTAAACCT +
Preference number: 5 (lower is better)
Translates to: PFLCKQSIVDSIANEQPHKAGCR*KAKPKP
Trigger: AGGTTTAGGTTTAGCCTTCAACCTGCAACCCGCCTT...GTGTGGCTGCTCATTGGCAATGCTATCAACTATAGATTGCTTGCAAAGGAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CAA 90 bp GTAATGAATCCCATAGTGAGGTACAGCTGTACCACGCTGCTACTAAAGGAGGCCGTACTCATCAATTCCTaGGTCTTTAGCATATGGAGC +
Preference number: 5 (lower is better)
Translates to: VMNPIVRYSCTTLLLKEAVLINS*VFSIWS
Trigger: GCTCCATATGCTAAAGACCAAGGAATTGATGAGTAC...GGCCTCCTTTAGTAGCAGCGTGGTACAGCTGTACCTCACTATGGGATTCATTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CAA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTCGGCACTGGAAAATCTaGGTGCACCCACGAGGTCCA +
Preference number: 5 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQIRHWKI*VHPRGP
Trigger: TGGACCTCGTGGGTGCACCAAGATTTTCCAGTGCCG...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CAA 90 bp GGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAACGGCACTGGAAAATCTaGGTGCACCCACGAGGTCCA +
Preference number: 5 (lower is better)
Translates to: GIQNSPYNQDRKSLEDFKRHWKI*VHPRGP
Trigger: TGGACCTCGTGGGTGCACCAAGATTTTCCAGTGCCG...TTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CAA 90 bp CAAGACAGCATAATAAGCCTCCTGCTATCACCACCGGCCGGCTGCCGTATTTATTCCGAATGTTTAGATTaGCTCAAGGGTTCAGATTCT +
Preference number: 5 (lower is better)
Translates to: QDSIISLLLSPPAGCRIYSECLD*LKGSDS
Trigger: AGAATCTGAACCCTTGAGCAAATCTAAACATTCGGA...ATAAATACGGCAGCCGGCCGGTGGTGATAGCAGGAGGCTTATTATGCTGTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS TCA 90 bp TGGGAGCTTGGGACCTCCTGCGTACATAACAGCCAGCATAATGGATaGAATCCATGCTATTTCACTGTAGGTAGTGTGGAATATTTGCTG +
Preference number: 5 (lower is better)
Translates to: WELGTSCVHNSQHNG*NPCYFTVGSVEYLL
Trigger: CAGCAAATATTCCACACTACCTACAGTGAAATAGCATGGATTTCATCCATTATGCTGGCTGTTATGTACGCAGGAGGTCCCAAGCTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551877.5
CDS TCA 90 bp GAGCTTGGGACCTGCTCCTGCGTACATAACAGCCAGCATAATGGATaGAATCCATGCTATTTCACTGTAGGTAGTGTGGAATATTTGCTG +
Preference number: 5 (lower is better)
Translates to: ELGTCSCVHNSQHNG*NPCYFTVGSVEYLL
Trigger: CAGCAAATATTCCACACTACCTACAGTGAAATAGCATGGATTTCATCCATTATGCTGGCTGTTATGTACGCAGGAGCAGGTCCCAAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549305.1
CDS-3UTR CAA 90 bp TACATGTATTTATATTCTCCAGTTAAATCCACCAATTTACCTGCAAGAGGAGGGGCACAGGTGGGGCACTaGGCATTGGTGGCATTTCTG +
Preference number: 5 (lower is better)
Translates to: YMYLYSPVKSTNLPARGGAQVGH*ALVAFL
Trigger: CAGAAATGCCACCAATGCCAAGTGCCCCACCTGTGC...CCCTCCTCTTGCAGGTAAATTGGTGGATTTAACTGGAGAATATAAATACATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CAA 90 bp TTGTGTTCTTTAGACAGCGATCCCATAATAACACGTCAATCAACTGATGGAATAGCACAGGTGGGGCACTaGGCATTGGTGGCATTTCTG +
Preference number: 5 (lower is better)
Translates to: LCSLDSDPIITRQSTDGIAQVGH*ALVAFL
Trigger: CAGAAATGCCACCAATGCCAAGTGCCCCACCTGTGC...TATTCCATCAGTTGATTGACGTGTTATTATGGGATCGCTGTCTAAAGAACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549465.5
CDS-3UTR CAA 90 bp CTAGCAAACATATCAACGAAAGCCATAACAGATAGCAGAAAAGCTGCCGAGTACAAGGCGGGTTGCAGGTaGAAGGCTAAACCTAAACCT +
Preference number: 5 (lower is better)
Translates to: LANISTKAITDSRKAAEYKAGCR*KAKPKP
Trigger: AGGTTTAGGTTTAGCCTTCAACCTGCAACCCGCCTT...GTACTCGGCAGCTTTTCTGCTATCTGTTATGGCTTTCGTTGATATGTTTGCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CAA 90 bp GGGTTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACAGACTTAGAAGTGGTTaGATTGGGTCCAAGGGGTCT +
Preference number: 5 (lower is better)
Translates to: GFGIQNSPYNQDRKSLEDRLRSG*IGSKGS
Trigger: AGACCCCTTGGACCCAATCAAACCACTTCTAAGTCT...GTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CAA 90 bp GGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAACGGCACTGGAAAATCTaGGTGCACCCACGAGGTCCA +
Preference number: 5 (lower is better)
Translates to: GFRILHITKTESHWKTLKRHWKI*VHPRGP
Trigger: TGGACCTCGTGGGTGCACCAAGATTTTCCAGTGCCG...TTTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CAA 90 bp AATGAAATGTATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACGTGGGGCACTTGGCATaGGTGGCATTTCTGCTCCTA +
Preference number: 5 (lower is better)
Translates to: NEMYKGSLCRIRHPPSTYVGHLA*VAFLLL
Trigger: TAGGAGCAGAAATGCCACCAATGCCAAGTGCCCCAC...GTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATACATTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552432.5
CDS TCA 90 bp ACGGCAGCTGTAAGCTCCTGCGTACATAACAGCCAGCATAATGGATaGAATCCATGCTATTTCACTGTAGGTAGTGTGGAATATTTGCTG +
Preference number: 5 (lower is better)
Translates to: TAAVSSCVHNSQHNG*NPCYFTVGSVEYLL
Trigger: CAGCAAATATTCCACACTACCTACAGTGAAATAGCATGGATTTCATCCATTATGCTGGCTGTTATGTACGCAGGAGCTTACAGCTGCCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547801.1
CDS-3UTR CAA 90 bp AATGAAATGTATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACCCATGGCCAATCCATTaGCCATGGGTCGCTTCCTAT +
Preference number: 5 (lower is better)
Translates to: NEMYKGSLCRIRHPPSTYPWPIH*PWVASY
Trigger: ATAGGAAGCGACCCATGGCAAATGGATTGGCCATGG...GTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATACATTTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CAA 90 bp CTAGCAAACATATCAACGAAAGCCATAACAGATAGCAGAAAAGCTGCCGAGTACAGACTTAGAAGTGGTTaGATTGGGTCCAAGGGGTCT +
Preference number: 5 (lower is better)
Translates to: LANISTKAITDSRKAAEYRLRSG*IGSKGS
Trigger: AGACCCCTTGGACCCAATCAAACCACTTCTAAGTCT...GTACTCGGCAGCTTTTCTGCTATCTGTTATGGCTTTCGTTGATATGTTTGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CAA 90 bp AAAGCTGCCGAGTACTCATCAATTCCTTGGTCTTTAGCATATGGAGCCAAGAATCATATAATACCAGGCTaGTGTAGTCCTGTGCCAGTG +
Preference number: 5 (lower is better)
Translates to: KAAEYSSIPWSLAYGAKNHIIPG*CSPVPV
Trigger: CACTGGCACAGGACTACACAAGCCTGGTATTATATG...ATTCTTGGCTCCATATGCTAAAGACCAAGGAATTGATGAGTACTCGGCAGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CAA 90 bp TATTTGCCAATTATGGTTAAGGCGGGTTGCAGGTTGAAGGCTAAACCTAAACCTCTCTGGTCTTCTGCCTaGCATTTTCCTCCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: YLPIMVKAGCRLKAKPKPLWSSA*HFPPSF
Trigger: AAAGGAAGGAGGAAAATGCAAGGCAGAAGACCAGAG...AGGTTTAGGTTTAGCCTTCAACCTGCAACCCGCCTTAACCATAATTGGCAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CAA 90 bp GGGTTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACAGTTGTAGCAAGCACTaGAAAAGACCCTGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: GFGIQNSPYNQDRKSLEDSCSKH*KRPCSF
Trigger: GAAAGAGCAGGGTCTTTTCAAGTGCTTGCTACAACT...GTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CAA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTAGAGTCCCAGAGTCTTaGGTTCCCCAGATCACCTTG +
Preference number: 5 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQIRVPES*VPQITL
Trigger: CAAGGTGATCTGGGGAACCAAAGACTCTGGGACTCT...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547379.6
CDS-3UTR CAA 90 bp TATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGAGACTTAGAAGTGGTTaGATTGGGTCCAAGGGGTCT +
Preference number: 5 (lower is better)
Translates to: YKGSLCRIRHPPSTYLNQRLRSG*IGSKGS
Trigger: AGACCCCTTGGACCCAATCAAACCACTTCTAAGTCT...CTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CAA 90 bp ATTTTTAGACTTAGAAGTGGTTTGATTGGGTCCAAGGGGTCTCATGAGGGAACCGTACTCATCAATTCCTaGGTCTTTAGCATATGGAGC +
Preference number: 5 (lower is better)
Translates to: IFRLRSGLIGSKGSHEGTVLINS*VFSIWS
Trigger: GCTCCATATGCTAAAGACCAAGGAATTGATGAGTAC...GGTTCCCTCATGAGACCCCTTGGACCCAATCAAACCACTTCTAAGTCTAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CAA 90 bp TATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGCTCTGGTCTTCTGCCTaGCATTTTCCTCCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: YKGSLCRIRHPPSTYLNQLWSSA*HFPPSF
Trigger: AAAGGAAGGAGGAAAATGCAAGGCAGAAGACCAGAG...CTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CAA 90 bp CTTTGCAAGCAATCTATAGTTGATAGCATTGCCAATGAGCAGCCACACGCTTGCTCCGAATGTTTAGATTaGCTCAAGGGTTCAGATTCT +
Preference number: 5 (lower is better)
Translates to: LCKQSIVDSIANEQPHACSECLD*LKGSDS
Trigger: AGAATCTGAACCCTTGAGCAAATCTAAACATTCGGA...GCAAGCGTGTGGCTGCTCATTGGCAATGCTATCAACTATAGATTGCTTGCAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CAA 90 bp GGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAGCATCATGGCTGACTTaGAGAAGAATGCAGCGCCTT +
Preference number: 5 (lower is better)
Translates to: GIQNSPYNQDRKSLEDFKASWLT*RRMQRL
Trigger: AAGGCGCTGCATTCTTCTCAAAGTCAGCCATGATGC...TTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CAA 90 bp TTGTGTTCTTTAGACAGCGATCCCATAATAACACGTCAATCAACTGATGGAATAAGAGTCCCAGAGTCTTaGGTTCCCCAGATCACCTTG +
Preference number: 5 (lower is better)
Translates to: LCSLDSDPIITRQSTDGIRVPES*VPQITL
Trigger: CAAGGTGATCTGGGGAACCAAAGACTCTGGGACTCT...TATTCCATCAGTTGATTGACGTGTTATTATGGGATCGCTGTCTAAAGAACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549465.5
CDS TCA 90 bp ACTACTTACAGGACCTCCTGCGTACATAACAGCCAGCATAATGGATaGAATCCATGCTATTTCACTGTAGGTAGTGTGGAATATTTGCTG +
Preference number: 5 (lower is better)
Translates to: TTYRTSCVHNSQHNG*NPCYFTVGSVEYLL
Trigger: CAGCAAATATTCCACACTACCTACAGTGAAATAGCATGGATTTCATCCATTATGCTGGCTGTTATGTACGCAGGAGGTCCTGTAAGTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000548610.5
ENST00000552024.5
ENST00000552432.5
CDS TCA 90 bp CGTTTGACACTTTTCTCCAGGCTCAGGGCTAAGAAGAGAGGCAACTaGTCATTAACTTTTAGCCACAAGCAAACTTACATACATATCTCC +
Preference number: 5 (lower is better)
Translates to: RLTLFSRLRAKKRGN*SLTFSHKQTYIHIS
Trigger: GGAGATATGTATGTAAGTTTGCTTGTGGCTAAAAGTTAATGATCAGTTGCCTCTCTTCTTAGCCCTGAGCCTGGAGAAAAGTGTCAAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548610.5
CDS TCA 90 bp GTGCTTCATTCTTCCTCCTGCGTACATAACAGCCAGCATAATGGATaGAATCCATGCTATTTCACTGTAGGTAGTGTGGAATATTTGCTG +
Preference number: 5 (lower is better)
Translates to: VLHSSSCVHNSQHNG*NPCYFTVGSVEYLL
Trigger: CAGCAAATATTCCACACTACCTACAGTGAAATAGCATGGATTTCATCCATTATGCTGGCTGTTATGTACGCAGGAGGAAGAATGAAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550062.5
CDS-3UTR CAA 90 bp GGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAAAAGGCGGGTTGCAGGTaGAAGGCTAAACCTAAACCT +
Preference number: 5 (lower is better)
Translates to: GFRILHITKTESHWKTLKKAGCR*KAKPKP
Trigger: AGGTTTAGGTTTAGCCTTCAACCTGCAACCCGCCTT...TTTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CAA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACACATATAATACCAGGCTaGTGTAGTCCTGTGCCAGTG +
Preference number: 5 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTHIIPG*CSPVPV
Trigger: CACTGGCACAGGACTACACAAGCCTGGTATTATATG...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CAA 90 bp TTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTCATATAATACCAGGCTaGTGTAGTCCTGTGCCAGTG +
Preference number: 5 (lower is better)
Translates to: FGIQNSPYNQDRKSLEDFHIIPG*CSPVPV
Trigger: CACTGGCACAGGACTACACAAGCCTGGTATTATATG...AAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CAA 90 bp TTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTCTCTGGTCTTCTGCCTaGCATTTTCCTCCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: FGIQNSPYNQDRKSLEDFLWSSA*HFPPSF
Trigger: AAAGGAAGGAGGAAAATGCAAGGCAGAAGACCAGAG...AAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CAA 90 bp TGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGGGGTTTGGGATTCAGTGTGCATTTGAAACTTaGACGTTAACATCTTCCGAA +
Preference number: 5 (lower is better)
Translates to: CRIRHPPSTYLNQGFGIQCAFET*TLTSSE
Trigger: TTCGGAAGATGTTAACGTCAAAGTTTCAAATGCACA...CTGAATCCCAAACCCCTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CAA 90 bp TCTATAGTTGATAGCATTGCCAATGAGCAGCCACACGCTTGCTGCTACCACAATTGTGCATTTGAAACTTaGACGTTAACATCTTCCGAA +
Preference number: 5 (lower is better)
Translates to: SIVDSIANEQPHACCYHNCAFET*TLTSSE
Trigger: TTCGGAAGATGTTAACGTCAAAGTTTCAAATGCACA...ATTGTGGTAGCAGCAAGCGTGTGGCTGCTCATTGGCAATGCTATCAACTATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CAA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACACATACGGGTGTCGGTTaGGCTGAATCTAACCAAACA +
Preference number: 5 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTHTGVG*AESNQT
Trigger: TGTTTGGTTAGATTCAGCCAAACCGACACCCGTATG...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CAA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACAGTTCCCCAGATCACCTaGTTTCAGGTTTCACAGGAA +
Preference number: 5 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTVPQIT*FQVSQE
Trigger: TTCCTGTGAAACCTGAAACAAGGTGATCTGGGGAAC...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547379.6
CDS-3UTR CAA 90 bp GGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAGTTCCCCAGATCACCTaGTTTCAGGTTTCACAGGAA +
Preference number: 5 (lower is better)
Translates to: GIQNSPYNQDRKSLEDFKVPQIT*FQVSQE
Trigger: TTCCTGTGAAACCTGAAACAAGGTGATCTGGGGAAC...TTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547379.6
ENST00000552432.5
CDS TCA 90 bp CATATGATACCAACCTCCTGCGTACATAACAGCCAGCATAATGGATaGAATCCATGCTATTTCACTGTAGGTAGTGTGGAATATTTGCTG +
Preference number: 5 (lower is better)
Translates to: HMIPTSCVHNSQHNG*NPCYFTVGSVEYLL
Trigger: CAGCAAATATTCCACACTACCTACAGTGAAATAGCATGGATTTCATCCATTATGCTGGCTGTTATGTACGCAGGAGGTTGGTATCATATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549465.5
CDS-3UTR CAA 90 bp CTTTCTGGATTACGAACTAAAATCCCTGTAAAATCAATGGATGTGACTCATTGTAAGGCGGGTTGCAGGTaGAAGGCTAAACCTAAACCT +
Preference number: 5 (lower is better)
Translates to: LSGLRTKIPVKSMDVTHCKAGCR*KAKPKP
Trigger: AGGTTTAGGTTTAGCCTTCAACCTGCAACCCGCCTT...ACAATGAGTCACATCCATTGATTTTACAGGGATTTTAGTTCGTAATCCAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CAA 90 bp TACATGTATTTATATTCTCCAGTTAAATCCACCAATTTACCTGCAAGAGGAGGGAGACTTAGAAGTGGTTaGATTGGGTCCAAGGGGTCT +
Preference number: 5 (lower is better)
Translates to: YMYLYSPVKSTNLPARGGRLRSG*IGSKGS
Trigger: AGACCCCTTGGACCCAATCAAACCACTTCTAAGTCT...CCCTCCTCTTGCAGGTAAATTGGTGGATTTAACTGGAGAATATAAATACATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CAA 90 bp GATTGCAAAACTGAAGAAGTACTGAATTCGAGGTCGAATATATTTGGAGTTTGCCATATAATACCAGGCTaGTGTAGTCCTGTGCCAGTG +
Preference number: 5 (lower is better)
Translates to: DCKTEEVLNSRSNIFGVCHIIPG*CSPVPV
Trigger: CACTGGCACAGGACTACACAAGCCTGGTATTATATG...GCAAACTCCAAATATATTCGACCTCGAATTCAGTACTTCTTCAGTTTTGCAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CAA 90 bp GATTGCAAAACTGAAGAAGTACTGAATTCGAGGTCGAATATATTTGGAGTTTGCCTCTGGTCTTCTGCCTaGCATTTTCCTCCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: DCKTEEVLNSRSNIFGVCLWSSA*HFPPSF
Trigger: AAAGGAAGGAGGAAAATGCAAGGCAGAAGACCAGAG...GCAAACTCCAAATATATTCGACCTCGAATTCAGTACTTCTTCAGTTTTGCAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CAA 90 bp GGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAACTCTGGTCTTCTGCCTaGCATTTTCCTCCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: GFRILHITKTESHWKTLKLWSSA*HFPPSF
Trigger: AAAGGAAGGAGGAAAATGCAAGGCAGAAGACCAGAG...TTTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CAA 90 bp ATTTTTAGACTTAGAAGTGGTTTGATTGGGTCCAAGGGGTCTCATGAGGGAACCTGTGCATTTGAAACTTaGACGTTAACATCTTCCGAA +
Preference number: 5 (lower is better)
Translates to: IFRLRSGLIGSKGSHEGTCAFET*TLTSSE
Trigger: TTCGGAAGATGTTAACGTCAAAGTTTCAAATGCACA...GGTTCCCTCATGAGACCCCTTGGACCCAATCAAACCACTTCTAAGTCTAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549033.5
ENST00000549928.5
CDS-3UTR CAA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTGAAGAATGCAGCGCCTaGCAAGTGCACTATTTGAAT +
Preference number: 5 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQIEECSA*QVHYLN
Trigger: ATTCAAATAGTGCACTTGCAAGGCGCTGCATTCTTC...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CAA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTGCTCTAATTACACTGTaGCCAGACAGCTGTTATGGA +
Preference number: 5 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQIALITL*PDSCYG
Trigger: TCCATAACAGCTGTCTGGCAACAGTGTAATTAGAGC...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CAA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACAAGCTGGATGTGGCTGTaGCCAAGGAATGTCTTTTAT +
Preference number: 5 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTSWMWL*PRNVFY
Trigger: ATAAAAGACATTCCTTGGCAACAGCCACATCCAGCT...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CAA 90 bp TTCCAATTGTGTTCTTTAGACAGCGATCCCATAATAACACGTCAATCAACTGATGTTCCCCAGATCACCTaGTTTCAGGTTTCACAGGAA +
Preference number: 5 (lower is better)
Translates to: FQLCSLDSDPIITRQSTDVPQIT*FQVSQE
Trigger: TTCCTGTGAAACCTGAAACAAGGTGATCTGGGGAAC...ATCAGTTGATTGACGTGTTATTATGGGATCGCTGTCTAAAGAACACAATTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549465.5
CDS-3UTR CAA 90 bp TTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTGTACTCATCAATTCCTaGGTCTTTAGCATATGGAGC +
Preference number: 5 (lower is better)
Translates to: FGIQNSPYNQDRKSLEDFVLINS*VFSIWS
Trigger: GCTCCATATGCTAAAGACCAAGGAATTGATGAGTAC...AAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CAA 90 bp GGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAGTACTCATCAATTCCTaGGTCTTTAGCATATGGAGC +
Preference number: 5 (lower is better)
Translates to: GIQNSPYNQDRKSLEDFKVLINS*VFSIWS
Trigger: GCTCCATATGCTAAAGACCAAGGAATTGATGAGTAC...TTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CAA 90 bp TATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGTCCGAATGTTTAGATTaGCTCAAGGGTTCAGATTCT +
Preference number: 5 (lower is better)
Translates to: YKGSLCRIRHPPSTYLNQSECLD*LKGSDS
Trigger: AGAATCTGAACCCTTGAGCAAATCTAAACATTCGGA...CTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CAA 90 bp TATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGAATGGATGTGACTCATaGTTAAGAGTCATGCAGACT +
Preference number: 5 (lower is better)
Translates to: YKGSLCRIRHPPSTYLNQNGCDS*LRVMQT
Trigger: AGTCTGCATGACTCTTAACAATGAGTCACATCCATT...CTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CAA 90 bp GGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAAAGCTGGATGTGGCTGTaGCCAAGGAATGTCTTTTAT +
Preference number: 5 (lower is better)
Translates to: GFRILHITKTESHWKTLKSWMWL*PRNVFY
Trigger: ATAAAAGACATTCCTTGGCAACAGCCACATCCAGCT...TTTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CAA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACAACTAAAATAACATCCTaGTCCACAAGGAGCTCACAG +
Preference number: 5 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTTKITS*STRSSQ
Trigger: CTGTGAGCTCCTTGTGGACAAGGATGTTATTTTAGT...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS TCA 90 bp ATTGTGTTCTTTAGACAGCGATCCCATAATAACACGTCAATCAACTaGTGGAATATACAGCTATTGCATATGATACCAACCTCCTGCGTA +
Preference number: 5 (lower is better)
Translates to: IVFFRQRSHNNTSIN*WNIQLLHMIPTSCV
Trigger: TACGCAGGAGGTTGGTATCATATGCAATAGCTGTATATTCCATCAGTTGATTGACGTGTTATTATGGGATCGCTGTCTAAAGAACACAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549465.5
CDS TCA 90 bp TTCAAATATTCTACCTCCTGCGTACATAACAGCCAGCATAATGGATaGAATCCATGCTATTTCACTGTAGGTAGTGTGGAATATTTGCTG +
Preference number: 5 (lower is better)
Translates to: FKYSTSCVHNSQHNG*NPCYFTVGSVEYLL
Trigger: CAGCAAATATTCCACACTACCTACAGTGAAATAGCATGGATTTCATCCATTATGCTGGCTGTTATGTACGCAGGAGGTAGAATATTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000549033.5
ENST00000549588.5
ENST00000552405.5
CDS-3UTR CAA 90 bp ACTGTAGAGGTGTTCTCCTCAAGACTATGCTATGGCAATAATTTCTTGCATACATCCGAATGTTTAGATTaGCTCAAGGGTTCAGATTCT +
Preference number: 5 (lower is better)
Translates to: TVEVFSSRLCYGNNFLHTSECLD*LKGSDS
Trigger: AGAATCTGAACCCTTGAGCAAATCTAAACATTCGGA...TGTATGCAAGAAATTATTGCCATAGCATAGTCTTGAGGAGAACACCTCTACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CAA 90 bp TATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACTTAAACCAGTGTGCATTTGAAACTTaGACGTTAACATCTTCCGAA +
Preference number: 5 (lower is better)
Translates to: YKGSLCRIRHPPSTYLNQCAFET*TLTSSE
Trigger: TTCGGAAGATGTTAACGTCAAAGTTTCAAATGCACA...CTGGTTTAAGTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CAA 90 bp GGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAAATGGATGTGACTCATaGTTAAGAGTCATGCAGACT +
Preference number: 5 (lower is better)
Translates to: GIQNSPYNQDRKSLEDFKNGCDS*LRVMQT
Trigger: AGTCTGCATGACTCTTAACAATGAGTCACATCCATT...TTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CAA 90 bp CTTTCTGGATTACGAACTAAAATCCCTGTAAAATCAATGGATGTGACTCATTGTGCTCTAATTACACTGTaGCCAGACAGCTGTTATGGA +
Preference number: 5 (lower is better)
Translates to: LSGLRTKIPVKSMDVTHCALITL*PDSCYG
Trigger: TCCATAACAGCTGTCTGGCAACAGTGTAATTAGAGC...ACAATGAGTCACATCCATTGATTTTACAGGGATTTTAGTTCGTAATCCAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CAA 90 bp CTTTCTGGATTACGAACTAAAATCCCTGTAAAATCAATGGATGTGACTCATTGTAGTTGTAGCAAGCACTaGAAAAGACCCTGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: LSGLRTKIPVKSMDVTHCSCSKH*KRPCSF
Trigger: GAAAGAGCAGGGTCTTTTCAAGTGCTTGCTACAACT...ACAATGAGTCACATCCATTGATTTTACAGGGATTTTAGTTCGTAATCCAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CAA 90 bp GGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAAACTAAAATAACATCCTaGTCCACAAGGAGCTCACAG +
Preference number: 5 (lower is better)
Translates to: GFRILHITKTESHWKTLKTKITS*STRSSQ
Trigger: CTGTGAGCTCCTTGTGGACAAGGATGTTATTTTAGT...TTTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CAA 90 bp CAATTGTGTTCTTTAGACAGCGATCCCATAATAACACGTCAATCAACTGATGGATGGAATATACAGCTATaGCATATGATACCAACCTCC +
Preference number: 5 (lower is better)
Translates to: QLCSLDSDPIITRQSTDGWNIQL*HMIPTS
Trigger: GGAGGTTGGTATCATATGCAATAGCTGTATATTCCA...TCCATCAGTTGATTGACGTGTTATTATGGGATCGCTGTCTAAAGAACACAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549465.5
CDS-3UTR CAA 90 bp AATGAAATGTATAAAGGGTCACTTTGTAGGATTAGGCATCCTCCTTCTACCTACGTTTGTAGTTTGCTTTaGCTCTTGCATTTTGTGGAA +
Preference number: 5 (lower is better)
Translates to: NEMYKGSLCRIRHPPSTYVCSLL*LLHFVE
Trigger: TTCCACAAAATGCAAGAGCAAAAGCAAACTACAAAC...GTAGGTAGAAGGAGGATGCCTAATCCTACAAAGTGACCCTTTATACATTTCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CAA 90 bp CTTTCTGGATTACGAACTAAAATCCCTGTAAAATCAATGGATGTGACTCATTGTAAACTATACCTACGATaGCAAGTCATACAGTGCCTC +
Preference number: 5 (lower is better)
Translates to: LSGLRTKIPVKSMDVTHCKLYLR*QVIQCL
Trigger: GAGGCACTGTATGACTTGCAATCGTAGGTATAGTTT...ACAATGAGTCACATCCATTGATTTTACAGGGATTTTAGTTCGTAATCCAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CAA 90 bp GGGCCCACCCAATTCATAAAAGATTTTACTGCGATACATGAGTTTACCCAAATTATGTCACTGTTTCAATaGTGTTCTGGTTTAACTGTC +
Preference number: 5 (lower is better)
Translates to: GPTQFIKDFTAIHEFTQIMSLFQ*CSGLTV
Trigger: GACAGTTAAACCAGAACACAATTGAAACAGTGACAT...AATTTGGGTAAACTCATGTATCGCAGTAAAATCTTTTATGAATTGGGTGGGCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CAA 90 bp TTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTTGGTATACCCTGACTTaGCTTCATGATATCTCAAAT +
Preference number: 5 (lower is better)
Translates to: FGIQNSPYNQDRKSLEDFWYTLT*LHDISN
Trigger: ATTTGAGATATCATGAAGCAAAGTCAGGGTATACCA...AAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CAA 90 bp TTTGGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTATATTTTATCTTCCTTaGCTTCTCTGGCCTCTATTG +
Preference number: 5 (lower is better)
Translates to: FGIQNSPYNQDRKSLEDFIFYLP*LLWPLL
Trigger: CAATAGAGGCCAGAGAAGCAAAGGAAGATAAAATAT...AAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CAA 90 bp GGGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAATATTTTATCTTCCTTaGCTTCTCTGGCCTCTATTG +
Preference number: 5 (lower is better)
Translates to: GIQNSPYNQDRKSLEDFKIFYLP*LLWPLL
Trigger: CAATAGAGGCCAGAGAAGCAAAGGAAGATAAAATAT...TTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CAA 90 bp GGATTCAGAATTCTCCATATAACCAAGACCGAAAGTCACTGGAAGACTTTAAAATGTGCATTTGAAACTTaGACGTTAACATCTTCCGAA +
Preference number: 5 (lower is better)
Translates to: GFRILHITKTESHWKTLKCAFET*TLTSSE
Trigger: TTCGGAAGATGTTAACGTCAAAGTTTCAAATGCACA...TTTTAAAGTCTTCCAGTGACTTTCGGTCTTGGTTATATGGAGAATTCTGAATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000552432.5
CDS-3UTR CAA 90 bp CTTTCTGGATTACGAACTAAAATCCCTGTAAAATCAATGGATGTGACTCATTGTGTTTGTAGTTTGCTTTaGCTCTTGCATTTTGTGGAA +
Preference number: 5 (lower is better)
Translates to: LSGLRTKIPVKSMDVTHCVCSLL*LLHFVE
Trigger: TTCCACAAAATGCAAGAGCAAAAGCAAACTACAAAC...ACAATGAGTCACATCCATTGATTTTACAGGGATTTTAGTTCGTAATCCAGAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS-3UTR CAA 90 bp CTTTCTGGATTACGAACTAAAATCCCTGTAAAATCAATGGATGTGACTCATTGTTGGTATACCCTGACTTaGCTTCATGATATCTCAAAT +
Preference number: 5 (lower is better)
Translates to: LSGLRTKIPVKSMDVTHCWYTLT*LHDISN
Trigger: ATTTGAGATATCATGAAGCAAAGTCAGGGTATACCA...ACAATGAGTCACATCCATTGATTTTACAGGGATTTTAGTTCGTAATCCAGAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261187.8
ENST00000547379.6
CDS CCA 72 bp GTCCTCGCCCGCCACAGCCAGCGGAGAAGGAGGCGGTaGCGGGAAGGGGAGGCGCGGCTGCTGAACGCCCTT +
Preference number: 6 (lower is better)
Translates to: VLARHSQRRRRR*REGEARLLNAL
Trigger: AAGGGCGTTCAGCAGCCGCGCCTCCCCTTCCCGCCACCGCCTCCTTCTCCGCTGGCTGTGGCGGGCGAGGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547379.6
CDS GCA 72 bp GTGGCACTGGGCACGACCGCCCTTTCCAAGGCAGTCTaGAATCCTTTTCGCGGAAGTAGAGGAGAAAAGGGG +
Preference number: 6 (lower is better)
Translates to: VALGTTALSKAV*NPFRGSRGEKG
Trigger: CCCCTTTTCTCCTCTACTTCCGCGAAAAGGATTGCAGACTGCCTTGGAAAGGGCGGTCGTGCCCAGTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552024.5
CDS CCA 72 bp AGCTGCTCCAACCACAATCCAACCCCATCCTCCATCTaGAGGTGGATGCACAGGTGGGGCACTTGGCATTGG +
Preference number: 6 (lower is better)
Translates to: SCSNHNPTPSSI*RWMHRWGTWHW
Trigger: CCAATGCCAAGTGCCCCACCTGTGCATCCACCTCCAGATGGAGGATGGGGTTGGATTGTGGTTGGAGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000261187.8
ENST00000546459.5
ENST00000547379.6
ENST00000547801.1
ENST00000548610.5
ENST00000549033.5
ENST00000549305.1
ENST00000549465.5
ENST00000549588.5
ENST00000549928.5
ENST00000550062.5
ENST00000551877.5
ENST00000552024.5
ENST00000552405.5
ENST00000552432.5
CDS CCA 72 bp TTAAGATTGACTCTTTATCTGGTCTCTGGCGCAGGGTaGGCGCTGCAGCCCTCCGTTCCCAGCAAACCGCAG +
Preference number: 6 (lower is better)
Translates to: LRLTLYLVSGAG*ALQPSVPSKPQ
Trigger: CTGCGGTTTGCTGGGAACGGAGGGCTGCAGCGCCCACCCTGCGCCAGAGACCAGATAAAGAGTCAATCTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000547379.6
ENST00000549465.5
ENST00000552432.5
CDS GCA 72 bp CTCCTCTCTGCCTTGCTCGCTCTCCGGTTGTCCATGTaGTTCATTCTTCCTGGAGGTGAGATGGGAGCTTGG +
Preference number: 6 (lower is better)
Translates to: LLSALLALRLSM*FILPGGEMGAW
Trigger: CCAAGCTCCCATCTCACCTCCAGGAAGAATGAAGCACATGGACAACCGGAGAGCGAGCAAGGCAGAGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549305.1
ENST00000551877.5
CDS GCA 72 bp CTCCTCTCTGCCTTGCTCGCTCTCCGGTTGTCCATGTaGTTCATTCTTCCTCCTGCGTACATAACAGCCAGC +
Preference number: 6 (lower is better)
Translates to: LLSALLALRLSM*FILPPAYITAS
Trigger: GCTGGCTGTTATGTACGCAGGAGGAAGAATGAAGCACATGGACAACCGGAGAGCGAGCAAGGCAGAGAGGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550062.5
CDS CCA 72 bp GTATCACATCTTAAGATTGACTCTTTATCTGGTCTCTaGCGCAGGGTGGGCGCTGCAGCCCTCCGTTCCCAG +
Preference number: 6 (lower is better)
Translates to: VSHLKIDSLSGL*RRVGAAALRSQ
Trigger: CTGGGAACGGAGGGCTGCAGCGCCCACCCTGCGCCAGAGACCAGATAAAGAGTCAATCTTAAGATGTGATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000547379.6
ENST00000549465.5
ENST00000552432.5
CDS CCA 72 bp GGTTGTCCATGTGCTTCATTCTTCCTGGAGGTGAGATaGGAGCTTGGGACCTCCTGCGTACATAACAGCCAG +
Preference number: 6 (lower is better)
Translates to: GCPCASFFLEVR*ELGTSCVHNSQ
Trigger: CTGGCTGTTATGTACGCAGGAGGTCCCAAGCTCCCATCTCACCTCCAGGAAGAATGAAGCACATGGACAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551877.5
CDS CAA 72 bp TCAGTGAAGCTCCTCTCTGCCTTGCTCGCTCTCCGGTaGTCCATGTGCTTCATTCTTCCTGGAGGTGAGATG +
Preference number: 6 (lower is better)
Translates to: SVKLLSALLALR*SMCFILPGGEM
Trigger: CATCTCACCTCCAGGAAGAATGAAGCACATGGACAACCGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACTGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549305.1
ENST00000551877.5
CDS CAA 90 bp TTTTGTTGCTCAGTGAAGCTCCTCTCTGCCTTGCTCGCTCTCCGGTaGTCCATGTGCTTCATTCTTCCTGGAGGTGAGATGGGAGCTTGG +
Preference number: 6 (lower is better)
Translates to: FCCSVKLLSALLALR*SMCFILPGGEMGAW
Trigger: CCAAGCTCCCATCTCACCTCCAGGAAGAATGAAGCACATGGACAACCGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549305.1
ENST00000551877.5
CDS TCA 72 bp TCTCCGGTTGTCCATGTGCTTCATTCTTCCTGGAGGTaGGATGGGAGCTTGGGACCTCCTGCGTACATAACA +
Preference number: 6 (lower is better)
Translates to: SPVVHVLHSSWR*DGSLGPPAYIT
Trigger: TGTTATGTACGCAGGAGGTCCCAAGCTCCCATCTCACCTCCAGGAAGAATGAAGCACATGGACAACCGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551877.5
CDS CCA 72 bp TATCACATCTTAAGATTGACTCCGGGAAAGTGGCACTaGGCACGACCGCCCTTTCCAAGGCAGTCTGCAATC +
Preference number: 6 (lower is better)
Translates to: YHILRLTPGKWH*ARPPFPRQSAI
Trigger: GATTGCAGACTGCCTTGGAAAGGGCGGTCGTGCCCAGTGCCACTTTCCCGGAGTCAATCTTAAGATGTGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552024.5
CDS CAA 72 bp TCAGTGAAGCTCCTCTCTGCCTTGCTCGCTCTCCGGTaGTCCATGTGCTTCATTCTTCCTCCTGCGTACATA +
Preference number: 6 (lower is better)
Translates to: SVKLLSALLALR*SMCFILPPAYI
Trigger: TATGTACGCAGGAGGAAGAATGAAGCACATGGACAACCGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACTGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550062.5
CDS CAA 90 bp TTTTGTTGCTCAGTGAAGCTCCTCTCTGCCTTGCTCGCTCTCCGGTaGTCCATGTGCTTCATTCTTCCTCCTGCGTACATAACAGCCAGC +
Preference number: 6 (lower is better)
Translates to: FCCSVKLLSALLALR*SMCFILPPAYITAS
Trigger: GCTGGCTGTTATGTACGCAGGAGGAAGAATGAAGCACATGGACAACCGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550062.5
CDS CCA 72 bp TGGAGGTGGATGCACAGGTGGGGCACTTGGCATTGGTaGCATTTCTGCTCCTCTAGTGGAAATTCAAGTAAC +
Preference number: 6 (lower is better)
Translates to: WRWMHRWGTWHW*HFCSSSGNSSN
Trigger: GTTACTTGAATTTCCACTAGAGGAGCAGAAATGCCACCAATGCCAAGTGCCCCACCTGTGCATCCACCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000261187.8
ENST00000546459.5
ENST00000547379.6
ENST00000547801.1
ENST00000548610.5
ENST00000549033.5
ENST00000549305.1
ENST00000549465.5
ENST00000549588.5
ENST00000549928.5
ENST00000550062.5
ENST00000551877.5
ENST00000552024.5
ENST00000552405.5
CDS GCA 72 bp CTAAGAGTTGTTTTGTTGCTCAGTGAAGCTCCTCTCTaGCTTGCTCGCTCTCCGGTTGTCCATGTGCTTCAT +
Preference number: 6 (lower is better)
Translates to: LRVVLLLSEAPL*LARSPVVHVLH
Trigger: ATGAAGCACATGGACAACCGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACAAAACAACTCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000549305.1
ENST00000550062.5
ENST00000551877.5
CDS CAA 72 bp GAGTTGTTTTGTTGCTCAGTGAAGCTCCTCTCTGCCTaGCTCGCTCTCCGGTTGTCCATGTGCTTCATTCTT +
Preference number: 6 (lower is better)
Translates to: ELFCCSVKLLSA*LALRLSMCFIL
Trigger: AAGAATGAAGCACATGGACAACCGGAGAGCGAGCAAGGCAGAGAGGAGCTTCACTGAGCAACAAAACAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000549305.1
ENST00000550062.5
ENST00000551877.5
CDS TCA 72 bp ACATGGTCTTCCATTTCACCAAGACATAAGTTTCCCTaGTCTATGGACTCCTCTCCCCACCTGAGGCAGAAG +
Preference number: 6 (lower is better)
Translates to: TWSSISPRHKFP*SMDSSPHLRQK
Trigger: CTTCTGCCTCAGGTGGGGAGAGGAGTCCATAGATCAGGGAAACTTATGTCTTGGTGAAATGGAAGACCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261187.8
ENST00000546459.5
ENST00000547801.1
ENST00000549033.5
ENST00000549305.1
ENST00000549588.5
ENST00000549928.5
ENST00000551877.5
ENST00000552405.5
CDS TCA 72 bp AGCAAACCGCAGCCGATTCGCCTCGCTGTCAACGGGTaGATGGAATTATTTATTTATTTATGGCCCCTGACG +
Preference number: 6 (lower is better)
Translates to: SKPQPIRLAVNG*MELFIYLWPLT
Trigger: CGTCAGGGGCCATAAATAAATAAATAATTCCATTCACCCGTTGACAGCGAGGCGAATCGGCTGCGGTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547379.6
ENST00000552432.5
CDS TCA 72 bp ATAAGTTTCCCTGATCTATGGACTCCTCTCCCCACCTaGGGCAGAAGTTTCCTTGTGAACCATTGCTCTTTT +
Preference number: 6 (lower is better)
Translates to: ISFPDLWTPLPT*GRSFLVNHCSF
Trigger: AAAAGAGCAATGGTTCACAAGGAAACTTCTGCCTCAGGTGGGGAGAGGAGTCCATAGATCAGGGAAACTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261187.8
ENST00000546459.5
ENST00000549033.5
ENST00000549588.5
ENST00000552405.5
CDS TCA 72 bp GGGACCTCCTGCGTACATAACAGCCAGCATAATGGATaGAATCCATGCTATTTCACTGTAGGTAGTGTGGAA +
Preference number: 6 (lower is better)
Translates to: GTSCVHNSQHNG*NPCYFTVGSVE
Trigger: TTCCACACTACCTACAGTGAAATAGCATGGATTTCATCCATTATGCTGGCTGTTATGTACGCAGGAGGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551877.5
CDS TCA 72 bp AGGACCTCCTGCGTACATAACAGCCAGCATAATGGATaGAATCCATGCTATTTCACTGTAGGTAGTGTGGAA +
Preference number: 6 (lower is better)
Translates to: RTSCVHNSQHNG*NPCYFTVGSVE
Trigger: TTCCACACTACCTACAGTGAAATAGCATGGATTTCATCCATTATGCTGGCTGTTATGTACGCAGGAGGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261187.8
ENST00000547379.6
ENST00000548610.5
ENST00000552024.5
ENST00000552432.5
CDS TCA 72 bp ACCTGCTCCTGCGTACATAACAGCCAGCATAATGGATaGAATCCATGCTATTTCACTGTAGGTAGTGTGGAA +
Preference number: 6 (lower is better)
Translates to: TCSCVHNSQHNG*NPCYFTVGSVE
Trigger: TTCCACACTACCTACAGTGAAATAGCATGGATTTCATCCATTATGCTGGCTGTTATGTACGCAGGAGCAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549305.1
CDS TCA 72 bp GTAAGCTCCTGCGTACATAACAGCCAGCATAATGGATaGAATCCATGCTATTTCACTGTAGGTAGTGTGGAA +
Preference number: 6 (lower is better)
Translates to: VSSCVHNSQHNG*NPCYFTVGSVE
Trigger: TTCCACACTACCTACAGTGAAATAGCATGGATTTCATCCATTATGCTGGCTGTTATGTACGCAGGAGCTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547801.1
CDS TCA 72 bp TCTACCTCCTGCGTACATAACAGCCAGCATAATGGATaGAATCCATGCTATTTCACTGTAGGTAGTGTGGAA +
Preference number: 6 (lower is better)
Translates to: STSCVHNSQHNG*NPCYFTVGSVE
Trigger: TTCCACACTACCTACAGTGAAATAGCATGGATTTCATCCATTATGCTGGCTGTTATGTACGCAGGAGGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000549033.5
ENST00000549588.5
ENST00000552405.5
CDS TCA 72 bp TCTTCCTCCTGCGTACATAACAGCCAGCATAATGGATaGAATCCATGCTATTTCACTGTAGGTAGTGTGGAA +
Preference number: 6 (lower is better)
Translates to: SSSCVHNSQHNG*NPCYFTVGSVE
Trigger: TTCCACACTACCTACAGTGAAATAGCATGGATTTCATCCATTATGCTGGCTGTTATGTACGCAGGAGGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550062.5
CDS TCA 72 bp CTTTTCTCCAGGCTCAGGGCTAAGAAGAGAGGCAACTaGTCATTAACTTTTAGCCACAAGCAAACTTACATA +
Preference number: 6 (lower is better)
Translates to: LFSRLRAKKRGN*SLTFSHKQTYI
Trigger: TATGTAAGTTTGCTTGTGGCTAAAAGTTAATGATCAGTTGCCTCTCTTCTTAGCCCTGAGCCTGGAGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548610.5
CDS TCA 72 bp ATTTCAAATGAGAGACTTGCAACTCTTCCTTTCACTTaGACACTTAGAAGCCACTGTAGGTTTATTAAGTGG +
Preference number: 6 (lower is better)
Translates to: ISNERLATLPFT*TLRSHCRFIKW
Trigger: CCACTTAATAAACCTACAGTGGCTTCTAAGTGTTCAAGTGAAAGGAAGAGTTGCAAGTCTCTCATTTGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549588.5
CDS CAA 72 bp AATCCATGCTATTTCACTGTAGGTAGTGTGGAATATTaGCTGAATTTCTTTGAAGAATACGGTGACAGCTTT +
Preference number: 6 (lower is better)
Translates to: NPCYFTVGSVEY*LNFFEEYGDSF
Trigger: AAAGCTGTCACCGTATTCTTCAAAGAAATTCAGCAAATATTCCACACTACCTACAGTGAAATAGCATGGATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000261187.8
ENST00000546459.5
ENST00000547379.6
ENST00000547801.1
ENST00000548610.5
ENST00000549033.5
ENST00000549305.1
ENST00000549465.5
ENST00000549588.5
ENST00000549928.5
ENST00000550062.5
ENST00000551877.5
ENST00000552024.5
ENST00000552405.5
ENST00000552432.5