Pregenerated sensors for SLC16A6 (Homo sapiens)
Ensembl gene IDs: ENSG00000108932Ensembl transcript IDs: ENST00000327268.8, ENST00000580666.6, ENST00000582867.1, ENST00000583477.5, ENST00000620436.4
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AAGCAGTATCCCAGACCAGAGATGATGCCGATGGCGACGTACATATaGGAAACCTCTTGTGAGAAGGAGGCGGCCACCATCCCGGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: KQYPRPEMMPMATYI*ETSCEKEAATIPVL Trigger: CAGCACCGGGATGGTGGCCGCCTCCTTCTCACAAGAGGTTTCTCATATGTACGTCGCCATCGGCATCATCTCTGGTCTGGGATACTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000327268.8 ENST00000580666.6 ENST00000620436.4 |
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| CDS CCA 90 bp | CTACCGCCCAGCCCCATCCTCCATCAGGCACTTCAGTATACACATTaGCTTTGGAACAAAGCTTTAATTTATTTTGGGTCATTCTTAATC | + |
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Preference number: 5 (lower is better) Translates to: LPPSPILHQALQYTH*LWNKALIYFGSFLI Trigger: GATTAAGAATGACCCAAAATAAATTAAAGCTTTGTTCCAAAGCCAATGTGTATACTGAAGTGCCTGATGGAGGATGGGGCTGGGCGGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000327268.8 ENST00000580666.6 ENST00000582867.1 ENST00000583477.5 ENST00000620436.4 |
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| CDS TCA 90 bp | CGAAAGCAAACACAGCGAAACATTCTCCTGTGGAAGCAACTGCAGTaGCTATGGAACGTCTTTTGCCAAAATATTGTGATAGGATGGTTA | + |
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Preference number: 5 (lower is better) Translates to: RKQTQRNILLWKQLQ*LWNVFCQNIVIGWL Trigger: TAACCATCCTATCACAATATTTTGGCAAAAGACGTTCCATAGTCACTGCAGTTGCTTCCACAGGAGAATGTTTCGCTGTGTTTGCTTTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000327268.8 ENST00000580666.6 ENST00000583477.5 ENST00000620436.4 |
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| CDS CCA 72 bp | AACCCCTTAGGGGGCGGGCCCGACTCTAGCGCAAGTTaGCTCGGGCTGGTGAGGCCCGAGCGCCCGGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: NPLGGGPDSSAS*LGLVRPERPGP Trigger: AGGGCCCGGGCGCTCGGGCCTCACCAGCCCGAGCCAACTTGCGCTAGAGTCGGGCCCGCCCCCTAAGGGGTT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000583477.5 |
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| CDS TCA 72 bp | CCCAGACCAGAGATGATGCCGATGGCGACGTACATATaGGAAACCTCTTGTGAGAAGGAGGCGGCCACCATC | + |
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Preference number: 6 (lower is better) Translates to: PRPEMMPMATYI*ETSCEKEAATI Trigger: GATGGTGGCCGCCTCCTTCTCACAAGAGGTTTCTCATATGTACGTCGCCATCGGCATCATCTCTGGTCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000327268.8 ENST00000580666.6 ENST00000620436.4 |
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| CDS CCA 72 bp | AATAAACCCCCAAAGGCTCCCAATAAGGCGGAGGCTTaGCCTCCCCCTCCTTATAAGCCGCTCGGTAACATG | + |
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Preference number: 6 (lower is better) Translates to: NKPPKAPNKAEA*PPPPYKPLGNM Trigger: CATGTTACCGAGCGGCTTATAAGGAGGGGGAGGCCAAGCCTCCGCCTTATTGGGAGCCTTTGGGGGTTTATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000582867.1 ENST00000583477.5 |
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| CDS TCA 72 bp | GATGATGCCGTAGGTGAAGACTTCAACGAAGAAAAATaGAACAGCTACCGCCCAGCCCCATCCTCCATCAGG | + |
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Preference number: 6 (lower is better) Translates to: DDAVGEDFNEEK*NSYRPAPSSIR Trigger: CCTGATGGAGGATGGGGCTGGGCGGTAGCTGTTTCATTTTTCTTCGTTGAAGTCTTCACCTACGGCATCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000327268.8 ENST00000580666.6 ENST00000582867.1 ENST00000583477.5 ENST00000620436.4 |
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| CDS CCA 72 bp | CTACCAGACGGTGTCCGAAACGATTGCTCAGGACTGTaGCGAGGGGAGCTGAAAATGTTAAGACAAACACAC | + |
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Preference number: 6 (lower is better) Translates to: LPDGVRNDCSGL*RGELKMLRQTH Trigger: GTGTGTTTGTCTTAACATTTTCAGCTCCCCTCGCCACAGTCCTGAGCAATCGTTTCGGACACCGTCTGGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000327268.8 ENST00000580666.6 ENST00000620436.4 |
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| CDS CAA 72 bp | CCTGTGGAAGCAACTGCAGTGACTATGGAACGTCTTTaGCCAAAATATTGTGATAGGATGGTTACAGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: PVEATAVTMERL*PKYCDRMVTVG Trigger: CCCAACTGTAACCATCCTATCACAATATTTTGGCAAAAGACGTTCCATAGTCACTGCAGTTGCTTCCACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000327268.8 ENST00000580666.6 ENST00000583477.5 ENST00000620436.4 |
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| CDS CAA 90 bp | GCTACCGCCCAGCCCCATCCTCCATCAGGCACTTCAGTATACACATaGGCTTTGGAACAAAGCTTTAATTTATTTTGGGTCATTCTTAAT | + |
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Preference number: 6 (lower is better) Translates to: ATAQPHPPSGTSVYT*ALEQSFNLFWVILN Trigger: ATTAAGAATGACCCAAAATAAATTAAAGCTTTGTTCCAAAGCCAATGTGTATACTGAAGTGCCTGATGGAGGATGGGGCTGGGCGGTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000327268.8 ENST00000580666.6 ENST00000582867.1 ENST00000583477.5 ENST00000620436.4 |
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| CDS GCA 72 bp | AGCAAACACAGCGAAACATTCTCCTGTGGAAGCAACTaGAGTGACTATGGAACGTCTTTTGCCAAAATATTG | + |
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Preference number: 6 (lower is better) Translates to: SKHSETFSCGSN*SDYGTSFAKIL Trigger: CAATATTTTGGCAAAAGACGTTCCATAGTCACTGCAGTTGCTTCCACAGGAGAATGTTTCGCTGTGTTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000327268.8 ENST00000580666.6 ENST00000583477.5 ENST00000620436.4 |
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| CDS CAA 72 bp | CAGCCCCATCCTCCATCAGGCACTTCAGTATACACATaGGCTTTGGAACAAAGCTTTAATTTATTTTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: QPHPPSGTSVYT*ALEQSFNLFWV Trigger: GACCCAAAATAAATTAAAGCTTTGTTCCAAAGCCAATGTGTATACTGAAGTGCCTGATGGAGGATGGGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000327268.8 ENST00000580666.6 ENST00000582867.1 ENST00000583477.5 ENST00000620436.4 |
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| CDS TCA 72 bp | ACACAGCGAAACATTCTCCTGTGGAAGCAACTGCAGTaGCTATGGAACGTCTTTTGCCAAAATATTGTGATA | + |
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Preference number: 6 (lower is better) Translates to: TQRNILLWKQLQ*LWNVFCQNIVI Trigger: TATCACAATATTTTGGCAAAAGACGTTCCATAGTCACTGCAGTTGCTTCCACAGGAGAATGTTTCGCTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000327268.8 ENST00000580666.6 ENST00000583477.5 ENST00000620436.4 |
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| CDS CCA 72 bp | AGCCCCATCCTCCATCAGGCACTTCAGTATACACATTaGCTTTGGAACAAAGCTTTAATTTATTTTGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: SPILHQALQYTH*LWNKALIYFGS Trigger: TGACCCAAAATAAATTAAAGCTTTGTTCCAAAGCCAATGTGTATACTGAAGTGCCTGATGGAGGATGGGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000327268.8 ENST00000580666.6 ENST00000582867.1 ENST00000583477.5 ENST00000620436.4 |
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| CDS CAA 90 bp | AAACATTCTCCTGTGGAAGCAACTGCAGTGACTATGGAACGTCTTTaGCCAAAATATTGTGATAGGATGGTTACAGTTGGGAGAAAACTA | + |
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Preference number: 6 (lower is better) Translates to: KHSPVEATAVTMERL*PKYCDRMVTVGRKL Trigger: TAGTTTTCTCCCAACTGTAACCATCCTATCACAATATTTTGGCAAAAGACGTTCCATAGTCACTGCAGTTGCTTCCACAGGAGAATGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000327268.8 ENST00000580666.6 ENST00000583477.5 ENST00000620436.4 |
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| CDS CCA 72 bp | ATCCTCCATCAGGCACTTCAGTATACACATTGGCTTTaGAACAAAGCTTTAATTTATTTTGGGTCATTCTTA | + |
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Preference number: 6 (lower is better) Translates to: ILHQALQYTHWL*NKALIYFGSFL Trigger: TAAGAATGACCCAAAATAAATTAAAGCTTTGTTCCAAAGCCAATGTGTATACTGAAGTGCCTGATGGAGGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000327268.8 ENST00000580666.6 ENST00000582867.1 ENST00000583477.5 ENST00000620436.4 |
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