RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC16A2 (Homo sapiens)

Ensembl gene IDs: ENSG00000147100

Ensembl transcript IDs: ENST00000587091.6, ENST00000590447.1, ENST00000636771.1

Found 593 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AATCATTGGCAGGGCCATCATGCCCAGGAGGTAGCCAATGGCCTGTaGGGCCTGCATTGGGCCCACCAGCTCAAATGCAATGGGGGCCAT +
Preference number: 1 (lower is better)
Translates to: NHWQGHHAQEVANGL*GLHWAHQLKCNGGH
Trigger: ATGGCCCCCATTGCATTTGAGCTGGTGGGCCCAATGCAGGCCTCACAGGCCATTGGCTACCTCCTGGGCATGATGGCCCTGCCAATGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR TCA 90 bp GCTCCTGGGGACACAGTAGCACCTTTGGCAGTTGATTATAGTGGGTaGCTAACAAGCTGGGTCCAGGAGGTCCCATCCTCCTCCTCCCCC +
Preference number: 1 (lower is better)
Translates to: APGDTVAPLAVDYSG*LTSWVQEVPSSSSP
Trigger: GGGGGAGGAGGAGGATGGGACCTCCTGGACCCAGCTTGTTAGTCACCCACTATAATCAACTGCCAAAGGTGCTACTGTGTCCCCAGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR TCA 90 bp GCTGGACTGGGACCAGCGGAGGGGGCTCAGGACTTTGGCCTTGAATaGAATCATTGGAGGCCAACCATGCCCCAGCTGCCTGTTTGTAAC +
Preference number: 1 (lower is better)
Translates to: AGLGPAEGAQDFGLE*NHWRPTMPQLPVCN
Trigger: GTTACAAACAGGCAGCTGGGGCATGGTTGGCCTCCAATGATTTCATTCAAGGCCAAAGTCCTGAGCCCCCTCCGCTGGTCCCAGTCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR TCA 90 bp CACCATTGGCCAGACCCAGGCGGCGTTGAAAGTAGTGGCCCAGGATaGCGAGGGATGGCTGAAAGGCGAAGGAACAGCCACAACCAAAGA +
Preference number: 1 (lower is better)
Translates to: HHWPDPGGVESSGPG*RGMAERRRNSHNQR
Trigger: TCTTTGGTTGTGGCTGTTCCTTCGCCTTTCAGCCATCCCTCGTCATCCTGGGCCACTACTTTCAACGCCGCCTGGGTCTGGCCAATGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR TCA 90 bp GCCTCCCTGCCCCTCCACCCAGTGGCTCCCAAATATGGATGGCAATaGCCTCCTCAGCAAACAGAGATTTGGGCCTACCCTATTAGGCTC +
Preference number: 1 (lower is better)
Translates to: ASLPLHPVAPKYGWQ*PPQQTEIWAYPIRL
Trigger: GAGCCTAATAGGGTAGGCCCAAATCTCTGTTTGCTGAGGAGGTCATTGCCATCCATATTTGGGAGCCACTGGGTGGAGGGGCAGGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR TCA 90 bp GCTTGGGGTGTCCTGGGAGCTGGGCAGGAGGGGCCGGTAGGTGAGTaGAAGCAGCATAAGAACAAACATGAAGGTACTCAGCACCTGGAA +
Preference number: 1 (lower is better)
Translates to: AWGVLGAGQEGPVGE*KQHKNKHEGTQHLE
Trigger: TTCCAGGTGCTGAGTACCTTCATGTTTGTTCTTATGCTGCTTTCACTCACCTACCGGCCCCTCCTGCCCAGCTCCCAGGACACCCCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR CCA 90 bp CAGACCCAGGCGGCGTTGAAAGTAGTGGCCCAGGATGACGAGGGATaGCTGAAAGGCGAAGGAACAGCCACAACCAAAGAGAATCCCGTA +
Preference number: 1 (lower is better)
Translates to: QTQAALKVVAQDDEG*LKGEGTATTKENPV
Trigger: TACGGGATTCTCTTTGGTTGTGGCTGTTCCTTCGCCTTTCAGCCATCCCTCGTCATCCTGGGCCACTACTTTCAACGCCGCCTGGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR CCA 90 bp CCCCAGAGCTTAGAAAGTATATGGAGAGGTTCCAAAGGCCAGGGGTaGTTCCCAAGCTTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGA +
Preference number: 1 (lower is better)
Translates to: PQSLESIWRGSKGQG*FPSFPRSWEEKGPG
Trigger: TCCAGGGCCTTTCTCCTCCCAGGATCTGGGAAAGCTTGGGAACCACCCCTGGCCTTTGGAACCTCTCCATATACTTTCTAAGCTCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR CCA 90 bp GCACCTTTAATGCCCTCTAAGCAAAGTGGCCTAGGATGCCCAGCATaGGAGACACATTGGGTGGTAAAGGCTGGGATGGCTTCCCCTTCC +
Preference number: 1 (lower is better)
Translates to: APLMPSKQSGLGCPA*ETHWVVKAGMASPS
Trigger: GGAAGGGGAAGCCATCCCAGCCTTTACCACCCAATGTGTCTCCCATGCTGGGCATCCTAGGCCACTTTGCTTAGAGGGCATTAAAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR CCA 90 bp GAACTATTGTCTTCTTTGGAGCCCCTCAGGACAACCTCATCCTCCTaGCCCGGGGATGACCCTGCCTTAAGGTGGCAAGTTACTGTTGGC +
Preference number: 1 (lower is better)
Translates to: ELLSSLEPLRTTSSS*PGDDPALRWQVTVG
Trigger: GCCAACAGTAACTTGCCACCTTAAGGCAGGGTCATCCCCGGGCCAGGAGGATGAGGTTGTCCTGAGGGGCTCCAAAGAAGACAATAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR CCA 90 bp ACTGATGCTAGTGTTAGGAGTGGACTGGGACAAGGTGAGGCTGATTaGCCCAAGTTCCGGGTCCCTCCTTTCTTCAAGCACCCATGTGTC +
Preference number: 1 (lower is better)
Translates to: TDASVRSGLGQGEAD*PKFRVPPFFKHPCV
Trigger: GACACATGGGTGCTTGAAGAAAGGAGGGACCCGGAACTTGGGCCAATCAGCCTCACCTTGTCCCAGTCCACTCCTAACACTAGCATCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR TCA 90 bp TTTGGAACACCTGGAGCTTTGACTCCAAGGAGATTGTCAGGTGGCTaGAATGCTGTGTGCGCAGGTCTGGGAACAAGTGTGCTGGTGGCA +
Preference number: 1 (lower is better)
Translates to: FGTPGALTPRRLSGG*NAVCAGLGTSVLVA
Trigger: TGCCACCAGCACACTTGTTCCCAGACCTGCGCACACAGCATTTCAGCCACCTGACAATCTCCTTGGAGTCAAAGCTCCAGGTGTTCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR GCA 90 bp CCTTTCATGGCACCTTTAATGCCCTCTAAGCAAAGTGGCCTAGGATaGCCAGCATGGGAGACACATTGGGTGGTAAAGGCTGGGATGGCT +
Preference number: 1 (lower is better)
Translates to: PFMAPLMPSKQSGLG*PAWETHWVVKAGMA
Trigger: AGCCATCCCAGCCTTTACCACCCAATGTGTCTCCCATGCTGGGCATCCTAGGCCACTTTGCTTAGAGGGCATTAAAGGTGCCATGAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR CCA 90 bp CCCTCTAAGCAAAGTGGCCTAGGATGCCCAGCATGGGAGACACATTaGGTGGTAAAGGCTGGGATGGCTTCCCCTTCCCAAAAGAAATTT +
Preference number: 1 (lower is better)
Translates to: PSKQSGLGCPAWETH*VVKAGMASPSQKKF
Trigger: AAATTTCTTTTGGGAAGGGGAAGCCATCCCAGCCTTTACCACCCAATGTGTCTCCCATGCTGGGCATCCTAGGCCACTTTGCTTAGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR CCA 90 bp AGAGGTCCTACAGAACCACCCTCTGGTGACTTGGTGAGAGTGAGGTaGGGAGAAATGGAAGCAGGGGCATTGTTGCTCCAGTATTTTCAG +
Preference number: 1 (lower is better)
Translates to: RGPTEPPSGDLVRVR*GEMEAGALLLQYFQ
Trigger: CTGAAAATACTGGAGCAACAATGCCCCTGCTTCCATTTCTCCCCACCTCACTCTCACCAAGTCACCAGAGGGTGGTTCTGTAGGACCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR GCA 90 bp AACACCTGGAGCTTTGACTCCAAGGAGATTGTCAGGTGGCTGAAATaGTGTGTGCGCAGGTCTGGGAACAAGTGTGCTGGTGGCAAAAAT +
Preference number: 1 (lower is better)
Translates to: NTWSFDSKEIVRWLK*CVRRSGNKCAGGKN
Trigger: ATTTTTGCCACCAGCACACTTGTTCCCAGACCTGCGCACACAGCATTTCAGCCACCTGACAATCTCCTTGGAGTCAAAGCTCCAGGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR TCA 90 bp GGTAGCCCCAATACACACCAAGAGCACCCAGGTCTCCTTGATTTCTaGGAACTCCTCCTCCACATACTTCATCAGGTGTACATAGGGAAC +
Preference number: 1 (lower is better)
Translates to: GSPNTHQEHPGLLDF*ELLLHILHQVYIGN
Trigger: GTTCCCTATGTACACCTGATGAAGTATGTGGAGGAGGAGTTCTCAGAAATCAAGGAGACCTGGGTGCTCTTGGTGTGTATTGGGGCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR GCA 90 bp GGGCTCAGGACTTTGGCCTTGAATGAAATCATTGGAGGCCAACCATaGCCCAGCTGCCTGTTTGTAACGGAAAATCATGAGTGGGAACTA +
Preference number: 1 (lower is better)
Translates to: GLRTLALNEIIGGQP*PSCLFVTENHEWEL
Trigger: TAGTTCCCACTCATGATTTTCCGTTACAAACAGGCAGCTGGGGCATGGTTGGCCTCCAATGATTTCATTCAAGGCCAAAGTCCTGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR CCA 90 bp AGCAGCATAAGAACAAACATGAAGGTACTCAGCACCTGGAAGGTTTaGGCCAGCTTGATCTTATCCCCCAGCATTCTGATGAGGAAGGGG +
Preference number: 1 (lower is better)
Translates to: SSIRTNMKVLSTWKV*ASLILSPSILMRKG
Trigger: CCCCTTCCTCATCAGAATGCTGGGGGATAAGATCAAGCTGGCCCAAACCTTCCAGGTGCTGAGTACCTTCATGTTTGTTCTTATGCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR TCA 90 bp CCGCCATGGCAGCTCGTGTCATCAGTCCTCCTCTACCTGCTGAGATaGAAGGAGTTTCTTCACATTTTGCCATGTGTATACAAGAATGGG +
Preference number: 1 (lower is better)
Translates to: PPWQLVSSVLLYLLR*KEFLHILPCVYKNG
Trigger: CCCATTCTTGTATACACATGGCAAAATGTGAAGAAACTCCTTTCATCTCAGCAGGTAGAGGAGGACTGATGACACGAGCTGCCATGGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR TCA 90 bp TCCTCCCGCCATGGCAGCTCGTGTCATCAGTCCTCCTCTACCTGCTaGGATGAAAGGAGTTTCTTCACATTTTGCCATGTGTATACAAGA +
Preference number: 1 (lower is better)
Translates to: SSRHGSSCHQSSSTC*DERSFFTFCHVYTR
Trigger: TCTTGTATACACATGGCAAAATGTGAAGAAACTCCTTTCATCTCAGCAGGTAGAGGAGGACTGATGACACGAGCTGCCATGGCGGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR GCA 90 bp GGGACCTATGAATGTCTTCCCTTCATCTGGAGAGAAGTGGGCGACTaGCTGATTCTTAAGAGCCATCTGCATCTTAAGCAACAAAAGAGG +
Preference number: 1 (lower is better)
Translates to: GTYECLPFIWREVGD*LILKSHLHLKQQKR
Trigger: CCTCTTTTGTTGCTTAAGATGCAGATGGCTCTTAAGAATCAGGCAGTCGCCCACTTCTCTCCAGATGAAGGGAAGACATTCATAGGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR CCA 90 bp GTGAGTGAAAGCAGCATAAGAACAAACATGAAGGTACTCAGCACCTaGAAGGTTTGGGCCAGCTTGATCTTATCCCCCAGCATTCTGATG +
Preference number: 1 (lower is better)
Translates to: VSESSIRTNMKVLST*KVWASLILSPSILM
Trigger: CATCAGAATGCTGGGGGATAAGATCAAGCTGGCCCAAACCTTCCAGGTGCTGAGTACCTTCATGTTTGTTCTTATGCTGCTTTCACTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR TCA 90 bp CCTATGAATGTCTTCCCTTCATCTGGAGAGAAGTGGGCGACTGCCTaGTTCTTAAGAGCCATCTGCATCTTAAGCAACAAAAGAGGTCCT +
Preference number: 1 (lower is better)
Translates to: PMNVFPSSGEKWATA*FLRAICILSNKRGP
Trigger: AGGACCTCTTTTGTTGCTTAAGATGCAGATGGCTCTTAAGAATCAGGCAGTCGCCCACTTCTCTCCAGATGAAGGGAAGACATTCATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR CCA 90 bp CTGTTAACCAACCATACAATAAGGGCACTGCTTGTACCCAGTTCTTaGGAAGCCACAGTCATCAGCAACTCTAAGACTAACCAAGGCTAC +
Preference number: 1 (lower is better)
Translates to: LLTNHTIRALLVPSS*EATVISNSKTNQGY
Trigger: GTAGCCTTGGTTAGTCTTAGAGTTGCTGATGACTGTGGCTTCCCAAGAACTGGGTACAAGCAGTGCCCTTATTGTATGGTTGGTTAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR GCA 90 bp ACTTTGGCCTTGAATGAAATCATTGGAGGCCAACCATGCCCCAGCTaGCTGTTTGTAACGGAAAATCATGAGTGGGAACTATTGTCTTCT +
Preference number: 1 (lower is better)
Translates to: TLALNEIIGGQPCPS*LFVTENHEWELLSS
Trigger: AGAAGACAATAGTTCCCACTCATGATTTTCCGTTACAAACAGGCAGCTGGGGCATGGTTGGCCTCCAATGATTTCATTCAAGGCCAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR CCA 90 bp GAGATGAAAGGAGTTTCTTCACATTTTGCCATGTGTATACAAGAATaGGGTGCTGGGAGGGCCTTGAGGTTAATGCCTTGGACTGTAAGA +
Preference number: 1 (lower is better)
Translates to: EMKGVSSHFAMCIQE*GAGRALRLMPWTVR
Trigger: TCTTACAGTCCAAGGCATTAACCTCAAGGCCCTCCCAGCACCCCATTCTTGTATACACATGGCAAAATGTGAAGAAACTCCTTTCATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR GCA 90 bp GAAAGGAGTTTCTTCACATTTTGCCATGTGTATACAAGAATGGGGTaGTGGGAGGGCCTTGAGGTTAATGCCTTGGACTGTAAGATTTGT +
Preference number: 1 (lower is better)
Translates to: ERSFFTFCHVYTRMG*WEGLEVNALDCKIC
Trigger: ACAAATCTTACAGTCCAAGGCATTAACCTCAAGGCCCTCCCAGCACCCCATTCTTGTATACACATGGCAAAATGTGAAGAAACTCCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR CCA 90 bp TGTATACAAGAATGGGGTGCTGGGAGGGCCTTGAGGTTAATGCCTTaGACTGTAAGATTTGTAAAAATCAGTGACTGGAACATGGAACAC +
Preference number: 1 (lower is better)
Translates to: CIQEWGAGRALRLMP*TVRFVKISDWNMEH
Trigger: GTGTTCCATGTTCCAGTCACTGATTTTTACAAATCTTACAGTCCAAGGCATTAACCTCAAGGCCCTCCCAGCACCCCATTCTTGTATACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR CCA 90 bp AGGAGTTTCTTCACATTTTGCCATGTGTATACAAGAATGGGGTGCTaGGAGGGCCTTGAGGTTAATGCCTTGGACTGTAAGATTTGTAAA +
Preference number: 1 (lower is better)
Translates to: RSFFTFCHVYTRMGC*EGLEVNALDCKICK
Trigger: TTTACAAATCTTACAGTCCAAGGCATTAACCTCAAGGCCCTCCCAGCACCCCATTCTTGTATACACATGGCAAAATGTGAAGAAACTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR TCA 90 bp GGCCTTGAGGTTAATGCCTTGGACTGTAAGATTTGTAAAAATCAGTaGCTGGAACATGGAACACTGTGGTGTTTAAGGTTTCTTCCCTAT +
Preference number: 1 (lower is better)
Translates to: GLEVNALDCKICKNQ*LEHGTLWCLRFLPY
Trigger: ATAGGGAAGAAACCTTAAACACCACAGTGTTCCATGTTCCAGTCACTGATTTTTACAAATCTTACAGTCCAAGGCATTAACCTCAAGGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR CCA 90 bp AGGCCAGGGGTGGTTCCCAAGCTTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGTTGGTTCCTCAGGGTTaGGGGAGCCCGGCAGTAGCT +
Preference number: 2 (lower is better)
Translates to: RPGVVPKLSQILGGERPWLVPQG*GSPAVA
Trigger: AGCTACTGCCGGGCTCCCCCAACCCTGAGGAACCAA...CCAGGGCCTTTCTCCTCCCAGGATCTGGGAAAGCTTGGGAACCACCCCTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590447.1
ENST00000636771.1
3UTR CAA 90 bp GCTACTCCCAGCAGACACCACACCATTGGCCAGACCCAGGCGGCGTaGAAAGTAGTGGCCCAGGATGACGAGGGATGGCTGAAAGGCGAA +
Preference number: 2 (lower is better)
Translates to: ATPSRHHTIGQTQAA*KVVAQDDEGWLKGE
Trigger: TTCGCCTTTCAGCCATCCCTCGTCATCCTGGGCCACTACTTTCAACGCCGCCTGGGTCTGGCCAATGGTGTGGTGTCTGCTGGGAGTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR CAA 90 bp GGGAAGAGCTGGGAAAGGGCACACAATGGCAAGAAAGGCATTAGATaGGTTCCTCAGGGTTGGGGGAGCCCGGCAGTAGCTCCCCATTGG +
Preference number: 2 (lower is better)
Translates to: GKSWERAHNGKKGIR*VPQGWGSPAVAPHW
Trigger: CCAATGGGGAGCTACTGCCGGGCTCCCCCAACCCTGAGGAACCAATCTAATGCCTTTCTTGCCATTGTGTGCCCTTTCCCAGCTCTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR TCA 90 bp GAGGTAGCCCCAATACACACCAAGAGCACCCAGGTCTCCTTGATTTCTGAGAACCCCCCGCGGTTGCTGTaGTTCGGCAGCCCAAACGGT +
Preference number: 2 (lower is better)
Translates to: EVAPIHTKSTQVSLISENPPRLL*FGSPNG
Trigger: ACCGTTTGGGCTGCCGAATCACAGCAACCGCGGGGG...GTTCTCAGAAATCAAGGAGACCTGGGTGCTCTTGGTGTGTATTGGGGCTACCTC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR CAA 90 bp AAGGGCAGCAGCAGCAATTCCGAAGGCCCAGATGCGGTAAGTGCGTaGGCGGAACACTCGCATGTTGAAGTACTTCCTGAGCTGAGCCAG +
Preference number: 2 (lower is better)
Translates to: KGSSSNSEGPDAVSA*AEHSHVEVLPELSQ
Trigger: CTGGCTCAGCTCAGGAAGTACTTCAACATGCGAGTGTTCCGCCAACGCACTTACCGCATCTGGGCCTTCGGAATTGCTGCTGCTGCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR-3UTR TCA 90 bp GGCCAGGGGTGGTTCCCAAGCTTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGACAAAAATGTAAATGCTaGGCAGGGTGGGATGAAGGG +
Preference number: 2 (lower is better)
Translates to: GQGWFPSFPRSWEEKGPGQKCKC*AGWDEG
Trigger: CCCTTCATCCCACCCTGCTCAGCATTTACATTTTTG...TCCAGGGCCTTTCTCCTCCCAGGATCTGGGAAAGCTTGGGAACCACCCCTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR TCA 90 bp GGGCTCAGGACTTTGGCCTTGAATGAAATCATTGGAGGCCAACCATGCCCCAGCCACAAAGAGGCAGAGTaGGGAGAGAGGCTGAGCTCC +
Preference number: 2 (lower is better)
Translates to: GLRTLALNEIIGGQPCPSHKEAE*GERLSS
Trigger: GGAGCTCAGCCTCTCTCCTCACTCTGCCTCTTTGTG...GCTGGGGCATGGTTGGCCTCCAATGATTTCATTCAAGGCCAAAGTCCTGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR TCA 90 bp TGCATTGGGCCCACCAGCTCAAATGCAATGGGGGCCATGATGGTGATGAAGAAGGTCACTGATGTGGCCTaGCACAAGACGCCCAAGGCC +
Preference number: 2 (lower is better)
Translates to: CIGPTSSNAMGAMMVMKKVTDVA*HKTPKA
Trigger: GGCCTTGGGCGTCTTGTGTCAGGCCACATCAGTGAC...CTTCTTCATCACCATCATGGCCCCCATTGCATTTGAGCTGGTGGGCCCAATGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR-3UTR CCA 90 bp GGAGTGGACTGGGACAAGGTGAGGCTGATTGGCCCAAGTTCCGGGTCCCTCCTTACCCTATTAGGCTCCTaGGGACACAGTAGCACCTTT +
Preference number: 2 (lower is better)
Translates to: GVDWDKVRLIGPSSGSLLTLLGS*GHSSTF
Trigger: AAAGGTGCTACTGTGTCCCCAGGAGCCTAATAGGGT...AAGGAGGGACCCGGAACTTGGGCCAATCAGCCTCACCTTGTCCCAGTCCACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR TCA 90 bp GGAGTGGACTGGGACAAGGTGAGGCTGATTGGCCCAAGTTCCGGGTCCCTCCTTGTTGATTATAGTGGGTaGCTAACAAGCTGGGTCCAG +
Preference number: 2 (lower is better)
Translates to: GVDWDKVRLIGPSSGSLLVDYSG*LTSWVQ
Trigger: CTGGACCCAGCTTGTTAGTCACCCACTATAATCAAC...AAGGAGGGACCCGGAACTTGGGCCAATCAGCCTCACCTTGTCCCAGTCCACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR TCA 90 bp TTCCAAAGGCCAGGGGTGGTTCCCAAGCTTTCCCAGATCCTGGGAGGAGAAAGGGCACCCAGGTCTCCTTaGTTTCTGAGAACTCCTCCT +
Preference number: 2 (lower is better)
Translates to: FQRPGVVPKLSQILGGERAPRSP*FLRTPP
Trigger: AGGAGGAGTTCTCAGAAATCAAGGAGACCTGGGTGC...CCTTTCTCCTCCCAGGATCTGGGAAAGCTTGGGAACCACCCCTGGCCTTTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR-3UTR GCA 90 bp CAGTGGGTTTTCCTTTGGGGAGTTGATAAGAGCTGGACTGGGACCAGCGGAGGGATTGGAGGCCAACCATaGCCCAGCTGCCTGTTTGTA +
Preference number: 2 (lower is better)
Translates to: QWVFLWGVDKSWTGTSGGIGGQP*PSCLFV
Trigger: TACAAACAGGCAGCTGGGGCATGGTTGGCCTCCAAT...CCCTCCGCTGGTCCCAGTCCAGCTCTTATCAACTCCCCAAAGGAAAACCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR GCA 90 bp GAGGTAGCCCCAATACACACCAAGAGCACCCAGGTCTCCTTGATTTCTGAGAACAGCGCTGGTGCAGGGTaGGGACACCTCTCTTGCTTG +
Preference number: 2 (lower is better)
Translates to: EVAPIHTKSTQVSLISENSAGAG*GHLSCL
Trigger: CAAGCAAGAGAGGTGTCCGCACCCTGCACCAGCGCT...GTTCTCAGAAATCAAGGAGACCTGGGTGCTCTTGGTGTGTATTGGGGCTACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR-3UTR CCA 90 bp TTTTCCAACCCTATGTGCAACTGCTGCCTGTACCTTTTTGGGATCCAGGCTAGGCCCCTCCTCCCGCCATaGCAGCTCGTGTCATCAGTC +
Preference number: 2 (lower is better)
Translates to: FSNPMCNCCLYLFGIQARPLLPP*QLVSSV
Trigger: GACTGATGACACGAGCTGCCATGGCGGGAGGAGGGG...CCTAGCCTGGATCCCAAAAAGGTACAGGCAGCAGTTGCACATAGGGTTGGAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR CCA 90 bp CAGTGGGTTTTCCTTTGGGGAGTTGATAAGAGCTGGACTGGGACCAGCGGAGGGGACCCTGCCTTAAGGTaGCAAGTTACTGTTGGCTCC +
Preference number: 2 (lower is better)
Translates to: QWVFLWGVDKSWTGTSGGDPALR*QVTVGS
Trigger: GGAGCCAACAGTAACTTGCCACCTTAAGGCAGGGTC...CCCTCCGCTGGTCCCAGTCCAGCTCTTATCAACTCCCCAAAGGAAAACCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR CCA 90 bp GGCATTGTTGCTCCAGTATTTTCAGTGGTCTCTCCTGGGAGTTACAGGGCTCCTCAGACACCACACCATTaGCCAGACCCAGGCGGCGTT +
Preference number: 2 (lower is better)
Translates to: GIVAPVFSVVSPGSYRAPQTPHH*PDPGGV
Trigger: AACGCCGCCTGGGTCTGGCCAATGGTGTGGTGTCTG...AGGAGCCCTGTAACTCCCAGGAGAGACCACTGAAAATACTGGAGCAACAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR-3UTR TCA 90 bp TTTTCAGTGGTCTCTCCTGGGAGTTACAGGGCTCCTAGGGCCCAGATTCTCCTGAGATTGTCAGGTGGCTaGAATGCTGTGTGCGCAGGT +
Preference number: 2 (lower is better)
Translates to: FSVVSPGSYRAPRAQILLRLSGG*NAVCAG
Trigger: ACCTGCGCACACAGCATTTCAGCCACCTGACAATCT...CAGGAGAATCTGGGCCCTAGGAGCCCTGTAACTCCCAGGAGAGACCACTGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR TCA 90 bp TCAGCAACTCTAAGACTAACCAAGGCTACTTGTCTCATTTTGCCTCCCTGCCCCTGGTATGGAGGCCAATaGAAGCAACGGCAGCCCCCG +
Preference number: 2 (lower is better)
Translates to: SATLRLTKATCLILPPCPWYGGQ*KQRQPP
Trigger: CGGGGGCTGCCGTTGCTTTCATTGGCCTCCATACCA...GGGGCAGGGAGGCAAAATGAGACAAGTAGCCTTGGTTAGTCTTAGAGTTGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR-3UTR GCA 90 bp ATCCTCCTCCTCCCCCAGAGCTTAGAAAGTATATGGAGAGGTTCCAAAGGCCAGGTCAGGTGGCTGAAATaGTGTGTGCGCAGGTCTGGG +
Preference number: 2 (lower is better)
Translates to: ILLLPQSLESIWRGSKGQVRWLK*CVRRSG
Trigger: CCCAGACCTGCGCACACAGCATTTCAGCCACCTGAC...CTGGCCTTTGGAACCTCTCCATATACTTTCTAAGCTCTGGGGGAGGAGGAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR CCA 90 bp AATGACCTCCTCAGCAAACAGAGATTTGGGCCTACCCTATTAGGCTCCTGGGGACTGTGTGCGCAGGTCTaGGAACAAGTGTGCTGGTGG +
Preference number: 2 (lower is better)
Translates to: NDLLSKQRFGPTLLGSWGLCAQV*EQVCWW
Trigger: CCACCAGCACACTTGTTCCCAGACCTGCGCACACAG...TCCCCAGGAGCCTAATAGGGTAGGCCCAAATCTCTGTTTGCTGAGGAGGTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR CCA 90 bp GATTGGCCCAAGTTCCGGGTCCCTCCTTTCTTCAAGCACCCATGTGTCTATGACTCCAAAGGCCAGGGGTaGTTCCCAAGCTTTCCCAGA +
Preference number: 2 (lower is better)
Translates to: DWPKFRVPPFFKHPCVYDSKGQG*FPSFPR
Trigger: TCTGGGAAAGCTTGGGAACCACCCCTGGCCTTTGGA...GTCATAGACACATGGGTGCTTGAAGAAAGGAGGGACCCGGAACTTGGGCCAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR CCA 90 bp GGCATTGTTGCTCCAGTATTTTCAGTGGTCTCTCCTGGGAGTTACAGGGCTCCTTGCCCCTCCACCCAGTaGCTCCCAAATATGGATGGC +
Preference number: 2 (lower is better)
Translates to: GIVAPVFSVVSPGSYRAPCPSTQ*LPNMDG
Trigger: GCCATCCATATTTGGGAGCCACTGGGTGGAGGGGCA...AGGAGCCCTGTAACTCCCAGGAGAGACCACTGAAAATACTGGAGCAACAATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR CCA 90 bp TTGTTGCTCCAGTATTTTCAGTGGTCTCTCCTGGGAGTTACAGGGCTCCTAGGGCAAGGTGAGGCTGATTaGCCCAAGTTCCGGGTCCCT +
Preference number: 2 (lower is better)
Translates to: LLLQYFQWSLLGVTGLLGQGEAD*PKFRVP
Trigger: AGGGACCCGGAACTTGGGCCAATCAGCCTCACCTTG...CCCTAGGAGCCCTGTAACTCCCAGGAGAGACCACTGAAAATACTGGAGCAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR CCA 90 bp GACAAGGTGAGGCTGATTGGCCCAAGTTCCGGGTCCCTCCTTTCTTCAAGCACCATGTGTATACAAGAATaGGGTGCTGGGAGGGCCTTG +
Preference number: 2 (lower is better)
Translates to: DKVRLIGPSSGSLLSSSTMCIQE*GAGRAL
Trigger: CAAGGCCCTCCCAGCACCCCATTCTTGTATACACAT...GGTGCTTGAAGAAAGGAGGGACCCGGAACTTGGGCCAATCAGCCTCACCTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR TCA 90 bp GACAAGGTGAGGCTGATTGGCCCAAGTTCCGGGTCCCTCCTTTCTTCAAGCACCTCCTCCTCTACCTGCTaGGATGAAAGGAGTTTCTTC +
Preference number: 2 (lower is better)
Translates to: DKVRLIGPSSGSLLSSSTSSSTC*DERSFF
Trigger: GAAGAAACTCCTTTCATCTCAGCAGGTAGAGGAGGA...GGTGCTTGAAGAAAGGAGGGACCCGGAACTTGGGCCAATCAGCCTCACCTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR TCA 90 bp TTTTCCAACCCTATGTGCAACTGCTGCCTGTACCTTTTTGGGATCCAGGCTAGGGTGAGCTGTGCTAACTaGACACAGCCTGGCAGTGCC +
Preference number: 2 (lower is better)
Translates to: FSNPMCNCCLYLFGIQARVSCAN*TQPGSA
Trigger: GGCACTGCCAGGCTGTGTTCAGTTAGCACAGCTCAC...CCTAGCCTGGATCCCAAAAAGGTACAGGCAGCAGTTGCACATAGGGTTGGAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR GCA 90 bp GGCATAAGGAGGCATCAGTCACCTACTTCAGAGGGATCAAAGTGGTTCAGAGTCCCCAGATGCGGTAAGTaGGTTGGCGGAACACTCGCA +
Preference number: 2 (lower is better)
Translates to: GIRRHQSPTSEGSKWFRVPRCGK*VGGTLA
Trigger: TGCGAGTGTTCCGCCAACGCACTTACCGCATCTGGG...GACTCTGAACCACTTTGATCCCTCTGAAGTAGGTGACTGATGCCTCCTTATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR-3UTR CCA 90 bp CTCCTCCCCCAGAGCTTAGAAAGTATATGGAGAGGTTCCAAAGGCCAGGGGTGGAAGGAGATTGTCAGGTaGCTGAAATGCTGTGTGCGC +
Preference number: 2 (lower is better)
Translates to: LLPQSLESIWRGSKGQGWKEIVR*LKCCVR
Trigger: GCGCACACAGCATTTCAGCCACCTGACAATCTCCTT...CCACCCCTGGCCTTTGGAACCTCTCCATATACTTTCTAAGCTCTGGGGGAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR CCA 90 bp AATGACCTCCTCAGCAAACAGAGATTTGGGCCTACCCTATTAGGCTCCTGGGGAAGCTTTCCCAGATCCTaGGAGGAGAAAGGCCCTGGA +
Preference number: 2 (lower is better)
Translates to: NDLLSKQRFGPTLLGSWGSFPRS*EEKGPG
Trigger: TCCAGGGCCTTTCTCCTCCCAGGATCTGGGAAAGCT...TCCCCAGGAGCCTAATAGGGTAGGCCCAAATCTCTGTTTGCTGAGGAGGTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR CCA 90 bp GGAGTGGACTGGGACAAGGTGAGGCTGATTGGCCCAAGTTCCGGGTCCCTCCTTAGCTTAGAAAGTATATaGAGAGGTTCCAAAGGCCAG +
Preference number: 2 (lower is better)
Translates to: GVDWDKVRLIGPSSGSLLSLESI*RGSKGQ
Trigger: CTGGCCTTTGGAACCTCTCCATATACTTTCTAAGCT...AAGGAGGGACCCGGAACTTGGGCCAATCAGCCTCACCTTGTCCCAGTCCACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR CCA 90 bp ATGGGCAGATTTGGGACCTATGAATGTCTTCCCTTCATCTGGAGAGAAGTGGGCCAAGGTGAGGCTGATTaGCCCAAGTTCCGGGTCCCT +
Preference number: 2 (lower is better)
Translates to: MGRFGTYECLPFIWREVGQGEAD*PKFRVP
Trigger: AGGGACCCGGAACTTGGGCCAATCAGCCTCACCTTG...GCCCACTTCTCTCCAGATGAAGGGAAGACATTCATAGGTCCCAAATCTGCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR CCA 90 bp GGCATAAGGAGGCATCAGTCACCTACTTCAGAGGGATCAAAGTGGTTCAGAGTCGGAGTTGATAAGAGCTaGACTGGGACCAGCGGAGGG +
Preference number: 2 (lower is better)
Translates to: GIRRHQSPTSEGSKWFRVGVDKS*TGTSGG
Trigger: CCCTCCGCTGGTCCCAGTCCAGCTCTTATCAACTCC...GACTCTGAACCACTTTGATCCCTCTGAAGTAGGTGACTGATGCCTCCTTATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR CCA 90 bp TTTTCAGTGGTCTCTCCTGGGAGTTACAGGGCTCCTAGGGCCCAGATTCTCCTGGGAAGGGGAAGGACATaGAGAAAATGCTACTCCCAG +
Preference number: 2 (lower is better)
Translates to: FSVVSPGSYRAPRAQILLGRGRT*RKCYSQ
Trigger: CTGGGAGTAGCATTTTCTCCATGTCCTTCCCCTTCC...CAGGAGAATCTGGGCCCTAGGAGCCCTGTAACTCCCAGGAGAGACCACTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR-3UTR CCA 90 bp TTTGTAACGGAAAATCATGAGTGGGAACTATTGTCTTCTTTGGAGCCCCTCAGGTTGCTTGGGGTGTCCTaGGAGCTGGGCAGGAGGGGC +
Preference number: 2 (lower is better)
Translates to: FVTENHEWELLSSLEPLRLLGVS*ELGRRG
Trigger: GCCCCTCCTGCCCAGCTCCCAGGACACCCCAAGCAA...CCTGAGGGGCTCCAAAGAAGACAATAGTTCCCACTCATGATTTTCCGTTACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR CAA 90 bp CAGTCATCAGCAACTCTAAGACTAACCAAGGCTACTTGTCTCATTTaGCCTCCCTGCCCCTCCACCCAGTGGCTCCCAAATATGGATGGC +
Preference number: 2 (lower is better)
Translates to: QSSATLRLTKATCLI*PPCPSTQWLPNMDG
Trigger: GCCATCCATATTTGGGAGCCACTGGGTGGAGGGGCAGGGAGGCAAAATGAGACAAGTAGCCTTGGTTAGTCTTAGAGTTGCTGATGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR TCA 90 bp ATGAGTGGGACTGATGCTAGTGTTAGGAGTGGACTGGGACAAGGTGAGGCTGATAGATTGTCAGGTGGCTaGAATGCTGTGTGCGCAGGT +
Preference number: 2 (lower is better)
Translates to: MSGTDASVRSGLGQGEADRLSGG*NAVCAG
Trigger: ACCTGCGCACACAGCATTTCAGCCACCTGACAATCT...ATCAGCCTCACCTTGTCCCAGTCCACTCCTAACACTAGCATCAGTCCCACTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR TCA 90 bp TCTTCACATTTTGCCATGTGTATACAAGAATGGGGTGCTGGGAGGGCCTTGAGGTGGCTCAGCCTGAGATaGGTGGGACTGATGCTAGTG +
Preference number: 2 (lower is better)
Translates to: SSHFAMCIQEWGAGRALRWLSLR*VGLMLV
Trigger: CACTAGCATCAGTCCCACTCATCTCAGGCTGAGCCA...CCTCAAGGCCCTCCCAGCACCCCATTCTTGTATACACATGGCAAAATGTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR TCA 90 bp CTACCCACAGAGCTAAGAACCAGTGGGTTTTCCTTTGGGGAGTTGATAAGAGCTGTGAGCTGTGCTAACTaGACACAGCCTGGCAGTGCC +
Preference number: 2 (lower is better)
Translates to: LPTELRTSGFSFGELIRAVSCAN*TQPGSA
Trigger: GGCACTGCCAGGCTGTGTTCAGTTAGCACAGCTCAC...AGCTCTTATCAACTCCCCAAAGGAAAACCCACTGGTTCTTAGCTCTGTGGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR GCA 90 bp CTACCCACAGAGCTAAGAACCAGTGGGTTTTCCTTTGGGGAGTTGATAAGAGCTGTCAGGTGGCTGAAATaGTGTGTGCGCAGGTCTGGG +
Preference number: 2 (lower is better)
Translates to: LPTELRTSGFSFGELIRAVRWLK*CVRRSG
Trigger: CCCAGACCTGCGCACACAGCATTTCAGCCACCTGAC...AGCTCTTATCAACTCCCCAAAGGAAAACCCACTGGTTCTTAGCTCTGTGGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR GCA 90 bp TTTGTAACGGAAAATCATGAGTGGGAACTATTGTCTTCTTTGGAGCCCCTCAGGGCCAGAAAGCGCTGGTaGAGGGTGCGGACACCTCTC +
Preference number: 2 (lower is better)
Translates to: FVTENHEWELLSSLEPLRARKRW*RVRTPL
Trigger: GAGAGGTGTCCGCACCCTGCACCAGCGCTTTCTGGC...CCTGAGGGGCTCCAAAGAAGACAATAGTTCCCACTCATGATTTTCCGTTACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR-3UTR CCA 90 bp CAAATATGGATGGCAATGACCTCCTCAGCAAACAGAGATTTGGGCCTACCCTATTTGGTTCCTCAGGGTTaGGGGAGCCCGGCAGTAGCT +
Preference number: 2 (lower is better)
Translates to: QIWMAMTSSANRDLGLPYLVPQG*GSPAVA
Trigger: AGCTACTGCCGGGCTCCCCCAACCCTGAGGAACCAA...ATAGGGTAGGCCCAAATCTCTGTTTGCTGAGGAGGTCATTGCCATCCATATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR CCA 90 bp GGGCTCCTAGGGCCCAGATTCTCCTGTTCCACTACTGTTAGAACTGACAGGATAATGAAGGGGAAGAGCTaGGAAAGGGCACACAATGGC +
Preference number: 2 (lower is better)
Translates to: GLLGPRFSCSTTVRTDRIMKGKS*ERAHNG
Trigger: GCCATTGTGTGCCCTTTCCCAGCTCTTCCCCTTCAT...TATCCTGTCAGTTCTAACAGTAGTGGAACAGGAGAATCTGGGCCCTAGGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR CCA 90 bp TTTTCCAACCCTATGTGCAACTGCTGCCTGTACCTTTTTGGGATCCAGGCTAGGAGCTTTCCCAGATCCTaGGAGGAGAAAGGCCCTGGA +
Preference number: 2 (lower is better)
Translates to: FSNPMCNCCLYLFGIQARSFPRS*EEKGPG
Trigger: TCCAGGGCCTTTCTCCTCCCAGGATCTGGGAAAGCT...CCTAGCCTGGATCCCAAAAAGGTACAGGCAGCAGTTGCACATAGGGTTGGAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR CCA 90 bp AAAGGGCACACAATGGCAAGAAAGGCATTAGATTGGTTCCTCAGGGTTGGGGGATCCAAAGGCCAGGGGTaGTTCCCAAGCTTTCCCAGA +
Preference number: 2 (lower is better)
Translates to: KGHTMARKALDWFLRVGGSKGQG*FPSFPR
Trigger: TCTGGGAAAGCTTGGGAACCACCCCTGGCCTTTGGA...TCCCCCAACCCTGAGGAACCAATCTAATGCCTTTCTTGCCATTGTGTGCCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR CCA 90 bp GCCATGGCAGCTCGTGTCATCAGTCCTCCTCTACCTGCTGAGATGAAAGGAGTTACCCTATTAGGCTCCTaGGGACACAGTAGCACCTTT +
Preference number: 2 (lower is better)
Translates to: AMAARVISPPLPAEMKGVTLLGS*GHSSTF
Trigger: AAAGGTGCTACTGTGTCCCCAGGAGCCTAATAGGGT...AACTCCTTTCATCTCAGCAGGTAGAGGAGGACTGATGACACGAGCTGCCATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR CCA 90 bp TTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGAAAATTTAAAAGCATTCTGGGGTGCCCCTCCACCCAGTaGCTCCCAAATATGGATGGC +
Preference number: 2 (lower is better)
Translates to: FPRSWEEKGPGKFKSILGCPSTQ*LPNMDG
Trigger: GCCATCCATATTTGGGAGCCACTGGGTGGAGGGGCA...CCCCAGAATGCTTTTAAATTTTCCAGGGCCTTTCTCCTCCCAGGATCTGGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR CCA 90 bp TTCCGGGTCCCTCCTTTCTTCAAGCACCCATGTGTCTATGACAGTCATACAAAGTGCCCCTCCACCCAGTaGCTCCCAAATATGGATGGC +
Preference number: 2 (lower is better)
Translates to: FRVPPFFKHPCVYDSHTKCPSTQ*LPNMDG
Trigger: GCCATCCATATTTGGGAGCCACTGGGTGGAGGGGCA...CTTTGTATGACTGTCATAGACACATGGGTGCTTGAAGAAAGGAGGGACCCGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR CAA 90 bp AGGCCTGAGGTAGCCCCAATACACACCAAGAGCACCCAGGTCTCCTaGATTTCTGAGAACTCCTCCTCCACATACTTCATCAGGTGTACA +
Preference number: 2 (lower is better)
Translates to: RPEVAPIHTKSTQVS*ISENSSSTYFIRCT
Trigger: TGTACACCTGATGAAGTATGTGGAGGAGGAGTTCTCAGAAATCAAGGAGACCTGGGTGCTCTTGGTGTGTATTGGGGCTACCTCAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR-3UTR TCA 90 bp TTTTGCCATGTGTATACAAGAATGGGGTGCTGGGAGGGCCTTGAGGTTAATGCCAGATTGTCAGGTGGCTaGAATGCTGTGTGCGCAGGT +
Preference number: 2 (lower is better)
Translates to: FCHVYTRMGCWEGLEVNARLSGG*NAVCAG
Trigger: ACCTGCGCACACAGCATTTCAGCCACCTGACAATCT...GGCATTAACCTCAAGGCCCTCCCAGCACCCCATTCTTGTATACACATGGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR TCA 90 bp GGGAAAGGGCACACAATGGCAAGAAAGGCATTAGATTGGTTCCTCAGGGTTGGGGAACACCTGGAGCTTTaGCTCCAAGGAGATTGTCAG +
Preference number: 2 (lower is better)
Translates to: GKGHTMARKALDWFLRVGEHLEL*LQGDCQ
Trigger: CTGACAATCTCCTTGGAGTCAAAGCTCCAGGTGTTC...CCCAACCCTGAGGAACCAATCTAATGCCTTTCTTGCCATTGTGTGCCCTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR TCA 90 bp TTCCGGGTCCCTCCTTTCTTCAAGCACCCATGTGTCTATGACAGTCATACAAAGAGAGAATCCCGTAGGTaGAGTAGCGCAGGCTTAGGG +
Preference number: 2 (lower is better)
Translates to: FRVPPFFKHPCVYDSHTKRESRR*SSAGLG
Trigger: CCCTAAGCCTGCGCTACTTCACCTACGGGATTCTCT...CTTTGTATGACTGTCATAGACACATGGGTGCTTGAAGAAAGGAGGGACCCGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR-3UTR TCA 90 bp CTTCAGAGGGATCAAAGTGGTTCAGAGTCTACCTTTCATGGCACCTTTAATGCCAGTAGTGGCCCAGGATaGCGAGGGATGGCTGAAAGG +
Preference number: 2 (lower is better)
Translates to: LQRDQSGSESTFHGTFNASSGPG*RGMAER
Trigger: CCTTTCAGCCATCCCTCGTCATCCTGGGCCACTACT...GGCATTAAAGGTGCCATGAAAGGTAGACTCTGAACCACTTTGATCCCTCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR-3UTR TCA 90 bp ACAAGAATGGGGTGCTGGGAGGGCCTTGAGGTTAATGCCTTGGACTGTAAGATTAGGTTTGGGCCAGCTTaGTCTTATCCCCCAGCATTC +
Preference number: 2 (lower is better)
Translates to: TRMGCWEGLEVNALDCKIRFGPA*SYPPAF
Trigger: GAATGCTGGGGGATAAGATCAAGCTGGCCCAAACCT...AATCTTACAGTCCAAGGCATTAACCTCAAGGCCCTCCCAGCACCCCATTCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR-3UTR TCA 90 bp GGGAAAGGGCACACAATGGCAAGAAAGGCATTAGATTGGTTCCTCAGGGTTGGGGGGCCGGTAGGTGAGTaGAAGCAGCATAAGAACAAA +
Preference number: 2 (lower is better)
Translates to: GKGHTMARKALDWFLRVGGPVGE*KQHKNK
Trigger: TTTGTTCTTATGCTGCTTTCACTCACCTACCGGCCC...CCCAACCCTGAGGAACCAATCTAATGCCTTTCTTGCCATTGTGTGCCCTTTCCC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR-3UTR GCA 90 bp GACAAGGTGAGGCTGATTGGCCCAAGTTCCGGGTCCCTCCTTTCTTCAAGCACCGTCTGGGAACAAGTGTaGTGGTGGCAAAAATGTAAA +
Preference number: 2 (lower is better)
Translates to: DKVRLIGPSSGSLLSSSTVWEQV*WWQKCK
Trigger: TTTACATTTTTGCCACCAGCACACTTGTTCCCAGAC...GGTGCTTGAAGAAAGGAGGGACCCGGAACTTGGGCCAATCAGCCTCACCTTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR CCA 90 bp GGGTGGTTCCCAAGCTTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGAAAATTTAGAAAGGCATTAGATTaGTTCCTCAGGGTTGGGGGA +
Preference number: 2 (lower is better)
Translates to: GWFPSFPRSWEEKGPGKFRKALD*FLRVGG
Trigger: TCCCCCAACCCTGAGGAACCAATCTAATGCCTTTCT...AAATTTTCCAGGGCCTTTCTCCTCCCAGGATCTGGGAAAGCTTGGGAACCACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR CCA 90 bp CAGTCATCAGCAACTCTAAGACTAACCAAGGCTACTTGTCTCATTTTGCCTCCCCTGTGTGCGCAGGTCTaGGAACAAGTGTGCTGGTGG +
Preference number: 2 (lower is better)
Translates to: QSSATLRLTKATCLILPPLCAQV*EQVCWW
Trigger: CCACCAGCACACTTGTTCCCAGACCTGCGCACACAG...GGGAGGCAAAATGAGACAAGTAGCCTTGGTTAGTCTTAGAGTTGCTGATGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR CCA 90 bp ATGAGTGGGACTGATGCTAGTGTTAGGAGTGGACTGGGACAAGGTGAGGCTGATCTTGTACCCAGTTCTTaGGAAGCCACAGTCATCAGC +
Preference number: 2 (lower is better)
Translates to: MSGTDASVRSGLGQGEADLVPSS*EATVIS
Trigger: GCTGATGACTGTGGCTTCCCAAGAACTGGGTACAAG...ATCAGCCTCACCTTGTCCCAGTCCACTCCTAACACTAGCATCAGTCCCACTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR CCA 90 bp TTTTGCCATGTGTATACAAGAATGGGGTGCTGGGAGGGCCTTGAGGTTAATGCCTTGGTGAGAGTGAGGTaGGGAGAAATGGAAGCAGGG +
Preference number: 2 (lower is better)
Translates to: FCHVYTRMGCWEGLEVNALVRVR*GEMEAG
Trigger: CCCTGCTTCCATTTCTCCCCACCTCACTCTCACCAA...GGCATTAACCTCAAGGCCCTCCCAGCACCCCATTCTTGTATACACATGGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR CAA 90 bp AGAACAAACATGAAGGTACTCAGCACCTGGAAGGTTTGGGCCAGCTaGATCTTATCCCCCAGCATTCTGATGAGGAAGGGGAAGGACATG +
Preference number: 2 (lower is better)
Translates to: RTNMKVLSTWKVWAS*ILSPSILMRKGKDM
Trigger: CATGTCCTTCCCCTTCCTCATCAGAATGCTGGGGGATAAGATCAAGCTGGCCCAAACCTTCCAGGTGCTGAGTACCTTCATGTTTGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR-3UTR TCA 90 bp GGCATTGTTGCTCCAGTATTTTCAGTGGTCTCTCCTGGGAGTTACAGGGCTCCTCAAAAATGTAAATGCTaGGCAGGGTGGGATGAAGGG +
Preference number: 2 (lower is better)
Translates to: GIVAPVFSVVSPGSYRAPQKCKC*AGWDEG
Trigger: CCCTTCATCCCACCCTGCTCAGCATTTACATTTTTG...AGGAGCCCTGTAACTCCCAGGAGAGACCACTGAAAATACTGGAGCAACAATGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR TCA 90 bp CCTCCCGCCATGGCAGCTCGTGTCATCAGTCCTCCTCTACCTGCTGAGATGAAAGGTTTCTTCCCTATATaGTATTCTACTCTTCCAGTC +
Preference number: 2 (lower is better)
Translates to: PPAMAARVISPPLPAEMKGFFPI*YSTLPV
Trigger: GACTGGAAGAGTAGAATATCATATAGGGAAGAAACC...TTTCATCTCAGCAGGTAGAGGAGGACTGATGACACGAGCTGCCATGGCGGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR TCA 90 bp CAGTCATCAGCAACTCTAAGACTAACCAAGGCTACTTGTCTCATTTTGCCTCCCATGACGAGGGATGGCTaGAAGGCGAAGGAACAGCCA +
Preference number: 2 (lower is better)
Translates to: QSSATLRLTKATCLILPPMTRDG*KAKEQP
Trigger: TGGCTGTTCCTTCGCCTTTCAGCCATCCCTCGTCAT...GGGAGGCAAAATGAGACAAGTAGCCTTGGTTAGTCTTAGAGTTGCTGATGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR-3UTR GCA 90 bp AATATGGATGGCAATGACCTCCTCAGCAAACAGAGATTTGGGCCTACCCTATTAGTCAGGTGGCTGAAATaGTGTGTGCGCAGGTCTGGG +
Preference number: 2 (lower is better)
Translates to: NMDGNDLLSKQRFGPTLLVRWLK*CVRRSG
Trigger: CCCAGACCTGCGCACACAGCATTTCAGCCACCTGAC...TAATAGGGTAGGCCCAAATCTCTGTTTGCTGAGGAGGTCATTGCCATCCATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR GCA 90 bp ATGGCAGCTCGTGTCATCAGTCCTCCTCTACCTGCTGAGATGAAAGGAGTTTCTTATACAAGAATGGGGTaGTGGGAGGGCCTTGAGGTT +
Preference number: 2 (lower is better)
Translates to: MAARVISPPLPAEMKGVSYTRMG*WEGLEV
Trigger: AACCTCAAGGCCCTCCCAGCACCCCATTCTTGTATA...AGAAACTCCTTTCATCTCAGCAGGTAGAGGAGGACTGATGACACGAGCTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR GCA 90 bp TTGTTCGTTCTAGATTTAACTGTGGTGCATAAGAGGCTGCATCCTACTCTAAATGGCAGCCCCCGCGGTTaGTGTGATTCGGCAGCCCAA +
Preference number: 2 (lower is better)
Translates to: LFVLDLTVVHKRLHPTLNGSPRG*CDSAAQ
Trigger: TTGGGCTGCCGAATCACAGCAACCGCGGGGGCTGCC...ATTTAGAGTAGGATGCAGCCTCTTATGCACCACAGTTAAATCTAGAACGAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR-3UTR CCA 90 bp TTTGTAACGGAAAATCATGAGTGGGAACTATTGTCTTCTTTGGAGCCCCTCAGGCTGTGTGCGCAGGTCTaGGAACAAGTGTGCTGGTGG +
Preference number: 2 (lower is better)
Translates to: FVTENHEWELLSSLEPLRLCAQV*EQVCWW
Trigger: CCACCAGCACACTTGTTCCCAGACCTGCGCACACAG...CCTGAGGGGCTCCAAAGAAGACAATAGTTCCCACTCATGATTTTCCGTTACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR CCA 90 bp CTTCAGAGGGATCAAAGTGGTTCAGAGTCTACCTTTCATGGCACCTTTAATGCCTTGGGTGGTAAAGGCTaGGATGGCTTCCCCTTCCCA +
Preference number: 2 (lower is better)
Translates to: LQRDQSGSESTFHGTFNALGGKG*DGFPFP
Trigger: TGGGAAGGGGAAGCCATCCCAGCCTTTACCACCCAA...GGCATTAAAGGTGCCATGAAAGGTAGACTCTGAACCACTTTGATCCCTCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR CAA 90 bp AAGCAGCATAAGAACAAACATGAAGGTACTCAGCACCTGGAAGGTTaGGGCCAGCTTGATCTTATCCCCCAGCATTCTGATGAGGAAGGG +
Preference number: 2 (lower is better)
Translates to: KQHKNKHEGTQHLEG*GQLDLIPQHSDEEG
Trigger: CCCTTCCTCATCAGAATGCTGGGGGATAAGATCAAGCTGGCCCAAACCTTCCAGGTGCTGAGTACCTTCATGTTTGTTCTTATGCTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR-3UTR TCA 90 bp TCAGCAACTCTAAGACTAACCAAGGCTACTTGTCTCATTTTGCCTCCCTGCCCCCAAAAATGTAAATGCTaGGCAGGGTGGGATGAAGGG +
Preference number: 2 (lower is better)
Translates to: SATLRLTKATCLILPPCPQKCKC*AGWDEG
Trigger: CCCTTCATCCCACCCTGCTCAGCATTTACATTTTTG...GGGGCAGGGAGGCAAAATGAGACAAGTAGCCTTGGTTAGTCTTAGAGTTGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR TCA 90 bp CTACCCACAGAGCTAAGAACCAGTGGGTTTTCCTTTGGGGAGTTGATAAGAGCTGAACACCTGGAGCTTTaGCTCCAAGGAGATTGTCAG +
Preference number: 2 (lower is better)
Translates to: LPTELRTSGFSFGELIRAEHLEL*LQGDCQ
Trigger: CTGACAATCTCCTTGGAGTCAAAGCTCCAGGTGTTC...AGCTCTTATCAACTCCCCAAAGGAAAACCCACTGGTTCTTAGCTCTGTGGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR TCA 90 bp ATGGGCAGATTTGGGACCTATGAATGTCTTCCCTTCATCTGGAGAGAAGTGGGCGTTGATTATAGTGGGTaGCTAACAAGCTGGGTCCAG +
Preference number: 2 (lower is better)
Translates to: MGRFGTYECLPFIWREVGVDYSG*LTSWVQ
Trigger: CTGGACCCAGCTTGTTAGTCACCCACTATAATCAAC...GCCCACTTCTCTCCAGATGAAGGGAAGACATTCATAGGTCCCAAATCTGCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR TCA 90 bp ATGAGTGGGACTGATGCTAGTGTTAGGAGTGGACTGGGACAAGGTGAGGCTGATAAATATGGATGGCAATaGCCTCCTCAGCAAACAGAG +
Preference number: 2 (lower is better)
Translates to: MSGTDASVRSGLGQGEADKYGWQ*PPQQTE
Trigger: CTCTGTTTGCTGAGGAGGTCATTGCCATCCATATTT...ATCAGCCTCACCTTGTCCCAGTCCACTCCTAACACTAGCATCAGTCCCACTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR CCA 90 bp CCCAGTTCTTGGGAAGCCACAGTCATCAGCAACTCTAAGACTAACCAAGGCTACAGAAAGGCATTAGATTaGTTCCTCAGGGTTGGGGGA +
Preference number: 2 (lower is better)
Translates to: PSSWEATVISNSKTNQGYRKALD*FLRVGG
Trigger: TCCCCCAACCCTGAGGAACCAATCTAATGCCTTTCT...GTAGCCTTGGTTAGTCTTAGAGTTGCTGATGACTGTGGCTTCCCAAGAACTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR CCA 90 bp TTCCGGGTCCCTCCTTTCTTCAAGCACCCATGTGTCTATGACAGTCATACAAAGATGTGTATACAAGAATaGGGTGCTGGGAGGGCCTTG +
Preference number: 2 (lower is better)
Translates to: FRVPPFFKHPCVYDSHTKMCIQE*GAGRAL
Trigger: CAAGGCCCTCCCAGCACCCCATTCTTGTATACACAT...CTTTGTATGACTGTCATAGACACATGGGTGCTTGAAGAAAGGAGGGACCCGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR CCA 90 bp TTGTTCGTTCTAGATTTAACTGTGGTGCATAAGAGGCTGCATCCTACTCTAAATCCCCTCCTCCCGCCATaGCAGCTCGTGTCATCAGTC +
Preference number: 2 (lower is better)
Translates to: LFVLDLTVVHKRLHPTLNPLLPP*QLVSSV
Trigger: GACTGATGACACGAGCTGCCATGGCGGGAGGAGGGG...ATTTAGAGTAGGATGCAGCCTCTTATGCACCACAGTTAAATCTAGAACGAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR TCA 90 bp TTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGAAAATTTAAAAGCATTCTGGGGGTTGATTATAGTGGGTaGCTAACAAGCTGGGTCCAG +
Preference number: 2 (lower is better)
Translates to: FPRSWEEKGPGKFKSILGVDYSG*LTSWVQ
Trigger: CTGGACCCAGCTTGTTAGTCACCCACTATAATCAAC...CCCCAGAATGCTTTTAAATTTTCCAGGGCCTTTCTCCTCCCAGGATCTGGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR TCA 90 bp GTCTTGAGCTCTGAAATTTTGTTCGTTCTAGATTTAACTGTGGTGCATAAGAGGGGCTTAGGGAGCTGGTaGAGGAGCTGGTATGGAGGC +
Preference number: 2 (lower is better)
Translates to: VLSSEILFVLDLTVVHKRGLGSW*RSWYGG
Trigger: GCCTCCATACCAGCTCCTTCACCAGCTCCCTAAGCC...CCTCTTATGCACCACAGTTAAATCTAGAACGAACAAAATTTCAGAGCTCAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR-3UTR CCA 90 bp CTCCTAGGGCCCAGATTCTCCTGTTCCACTACTGTTAGAACTGACAGGATAGTACAGCAAACAGAGATTTaGGCCTACCCTATTAGGCTC +
Preference number: 2 (lower is better)
Translates to: LLGPRFSCSTTVRTDRIVQQTEI*AYPIRL
Trigger: GAGCCTAATAGGGTAGGCCCAAATCTCTGTTTGCTG...TACTATCCTGTCAGTTCTAACAGTAGTGGAACAGGAGAATCTGGGCCCTAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR CCA 90 bp TTGTTGCTCCAGTATTTTCAGTGGTCTCTCCTGGGAGTTACAGGGCTCCTAGGGGAACATGGAACACTGTaGTGTTTAAGGTTTCTTCCC +
Preference number: 2 (lower is better)
Translates to: LLLQYFQWSLLGVTGLLGEHGTL*CLRFLP
Trigger: GGGAAGAAACCTTAAACACCACAGTGTTCCATGTTC...CCCTAGGAGCCCTGTAACTCCCAGGAGAGACCACTGAAAATACTGGAGCAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR CCA 90 bp ATGGGCAGATTTGGGACCTATGAATGTCTTCCCTTCATCTGGAGAGAAGTGGGCAACTATTGTCTTCTTTaGAGCCCCTCAGGACAACCT +
Preference number: 2 (lower is better)
Translates to: MGRFGTYECLPFIWREVGNYCLL*SPSGQP
Trigger: AGGTTGTCCTGAGGGGCTCCAAAGAAGACAATAGTT...GCCCACTTCTCTCCAGATGAAGGGAAGACATTCATAGGTCCCAAATCTGCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR TCA 90 bp AATATGGATGGCAATGACCTCCTCAGCAAACAGAGATTTGGGCCTACCCTATTAGAACACCTGGAGCTTTaGCTCCAAGGAGATTGTCAG +
Preference number: 2 (lower is better)
Translates to: NMDGNDLLSKQRFGPTLLEHLEL*LQGDCQ
Trigger: CTGACAATCTCCTTGGAGTCAAAGCTCCAGGTGTTC...TAATAGGGTAGGCCCAAATCTCTGTTTGCTGAGGAGGTCATTGCCATCCATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR TCA 90 bp TTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGAAAATTTAAAAGCATTCTGGGGAAATATGGATGGCAATaGCCTCCTCAGCAAACAGAG +
Preference number: 2 (lower is better)
Translates to: FPRSWEEKGPGKFKSILGKYGWQ*PPQQTE
Trigger: CTCTGTTTGCTGAGGAGGTCATTGCCATCCATATTT...CCCCAGAATGCTTTTAAATTTTCCAGGGCCTTTCTCCTCCCAGGATCTGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR TCA 90 bp ATGGGCAGATTTGGGACCTATGAATGTCTTCCCTTCATCTGGAGAGAAGTGGGCCTCTACCTGCTGAGATaGAAGGAGTTTCTTCACATT +
Preference number: 2 (lower is better)
Translates to: MGRFGTYECLPFIWREVGLYLLR*KEFLHI
Trigger: AATGTGAAGAAACTCCTTTCATCTCAGCAGGTAGAG...GCCCACTTCTCTCCAGATGAAGGGAAGACATTCATAGGTCCCAAATCTGCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR TCA 90 bp CTTCAGAGGGATCAAAGTGGTTCAGAGTCTACCTTTCATGGCACCTTTAATGCCACCTGTCATGAAAACTaGGAGATGGGGCTCACCATA +
Preference number: 2 (lower is better)
Translates to: LQRDQSGSESTFHGTFNATCHEN*EMGLTI
Trigger: TATGGTGAGCCCCATCTCTCAGTTTTCATGACAGGT...GGCATTAAAGGTGCCATGAAAGGTAGACTCTGAACCACTTTGATCCCTCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR CCA 90 bp AATACTGTGCTGCTTTTGCCAATCAACATTCTCTCCAAAAGCACACAAGCTCACTGTCTTCCCTTCATCTaGAGAGAAGTGGGCGACTGC +
Preference number: 2 (lower is better)
Translates to: NTVLLLPINILSKSTQAHCLPFI*REVGDC
Trigger: GCAGTCGCCCACTTCTCTCCAGATGAAGGGAAGACA...GTGAGCTTGTGTGCTTTTGGAGAGAATGTTGATTGGCAAAAGCAGCACAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR TCA 90 bp TTTTCCAACCCTATGTGCAACTGCTGCCTGTACCTTTTTGGGATCCAGGCTAGGGCACCCATGTGTCTATaGCAGTCATACAAAGAAATA +
Preference number: 2 (lower is better)
Translates to: FSNPMCNCCLYLFGIQARAPMCL*QSYKEI
Trigger: TATTTCTTTGTATGACTGTCATAGACACATGGGTGC...CCTAGCCTGGATCCCAAAAAGGTACAGGCAGCAGTTGCACATAGGGTTGGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR TCA 90 bp GGCATAAGGAGGCATCAGTCACCTACTTCAGAGGGATCAAAGTGGTTCAGAGTCGGTTTCTTCCCTATATaGTATTCTACTCTTCCAGTC +
Preference number: 2 (lower is better)
Translates to: GIRRHQSPTSEGSKWFRVGFFPI*YSTLPV
Trigger: GACTGGAAGAGTAGAATATCATATAGGGAAGAAACC...GACTCTGAACCACTTTGATCCCTCTGAAGTAGGTGACTGATGCCTCCTTATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR TCA 90 bp TTTTGCCATGTGTATACAAGAATGGGGTGCTGGGAGGGCCTTGAGGTTAATGCCGGTTTCTTCCCTATATaGTATTCTACTCTTCCAGTC +
Preference number: 2 (lower is better)
Translates to: FCHVYTRMGCWEGLEVNAGFFPI*YSTLPV
Trigger: GACTGGAAGAGTAGAATATCATATAGGGAAGAAACC...GGCATTAACCTCAAGGCCCTCCCAGCACCCCATTCTTGTATACACATGGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR TCA 90 bp TTTGTAACGGAAAATCATGAGTGGGAACTATTGTCTTCTTTGGAGCCCCTCAGGTCCTCCTCTACCTGCTaGGATGAAAGGAGTTTCTTC +
Preference number: 2 (lower is better)
Translates to: FVTENHEWELLSSLEPLRSSSTC*DERSFF
Trigger: GAAGAAACTCCTTTCATCTCAGCAGGTAGAGGAGGA...CCTGAGGGGCTCCAAAGAAGACAATAGTTCCCACTCATGATTTTCCGTTACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR GCA 90 bp CCCAGTTCTTGGGAAGCCACAGTCATCAGCAACTCTAAGACTAACCAAGGCTACTTGCTGGAATCTCTCTaGTCTTTCTTGAACATCCTT +
Preference number: 2 (lower is better)
Translates to: PSSWEATVISNSKTNQGYLLESL*SFLNIL
Trigger: AAGGATGTTCAAGAAAGAGCAGAGAGATTCCAGCAA...GTAGCCTTGGTTAGTCTTAGAGTTGCTGATGACTGTGGCTTCCCAAGAACTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR GCA 90 bp GTGGTGCATAAGAGGCTGCATCCTACTCTAAATATTAATACTGTGCTGCTTTTGCAAAGTGGCCTAGGATaGCCAGCATGGGAGACACAT +
Preference number: 2 (lower is better)
Translates to: VVHKRLHPTLNINTVLLLQSGLG*PAWETH
Trigger: ATGTGTCTCCCATGCTGGGCATCCTAGGCCACTTTG...CAAAAGCAGCACAGTATTAATATTTAGAGTAGGATGCAGCCTCTTATGCACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR CCA 90 bp TCCGGGTCCCTCCTTTCTTCAAGCACCCATGTGTCTATGACAGTCATACAAAGAAGCTTAGAAAGTATATaGAGAGGTTCCAAAGGCCAG +
Preference number: 2 (lower is better)
Translates to: SGSLLSSSTHVSMTVIQRSLESI*RGSKGQ
Trigger: CTGGCCTTTGGAACCTCTCCATATACTTTCTAAGCT...TCTTTGTATGACTGTCATAGACACATGGGTGCTTGAAGAAAGGAGGGACCCGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR CCA 90 bp TTCCGGGTCCCTCCTTTCTTCAAGCACCCATGTGTCTATGACAGTCATACAAAGTCAGAGGGATCAAAGTaGTTCAGAGTCTACCTTTCA +
Preference number: 2 (lower is better)
Translates to: FRVPPFFKHPCVYDSHTKSEGSK*FRVYLS
Trigger: TGAAAGGTAGACTCTGAACCACTTTGATCCCTCTGA...CTTTGTATGACTGTCATAGACACATGGGTGCTTGAAGAAAGGAGGGACCCGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR CCA 90 bp TTGTTGCTCCAGTATTTTCAGTGGTCTCTCCTGGGAGTTACAGGGCTCCTAGGGACGGAAAATCATGAGTaGGAACTATTGTCTTCTTTG +
Preference number: 2 (lower is better)
Translates to: LLLQYFQWSLLGVTGLLGTENHE*ELLSSL
Trigger: CAAAGAAGACAATAGTTCCCACTCATGATTTTCCGT...CCCTAGGAGCCCTGTAACTCCCAGGAGAGACCACTGAAAATACTGGAGCAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR CCA 90 bp GTGGTGCATAAGAGGCTGCATCCTACTCTAAATATTAATACTGTGCTGCTTTTGTTGGTGAGAGTGAGGTaGGGAGAAATGGAAGCAGGG +
Preference number: 2 (lower is better)
Translates to: VVHKRLHPTLNINTVLLLLVRVR*GEMEAG
Trigger: CCCTGCTTCCATTTCTCCCCACCTCACTCTCACCAA...CAAAAGCAGCACAGTATTAATATTTAGAGTAGGATGCAGCCTCTTATGCACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR TCA 90 bp AATATGGATGGCAATGACCTCCTCAGCAAACAGAGATTTGGGCCTACCCTATTATTCTTGAACATCCTTTaGTGCATCAGAGGGACGAAG +
Preference number: 2 (lower is better)
Translates to: NMDGNDLLSKQRFGPTLLFLNIL*CIRGTK
Trigger: CTTCGTCCCTCTGATGCATCAAAGGATGTTCAAGAA...TAATAGGGTAGGCCCAAATCTCTGTTTGCTGAGGAGGTCATTGCCATCCATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR GCA 90 bp GCCACAGTCATCAGCAACTCTAAGACTAACCAAGGCTACTTGTCTCATTTTGCCCCAACATCTTATCCTTaGTGGAATCTCTCTGCTCTT +
Preference number: 2 (lower is better)
Translates to: ATVISNSKTNQGYLSHFAPTSYP*WNLSAL
Trigger: AAGAGCAGAGAGATTCCAGCAAGGATAAGATGTTGG...GGCAAAATGAGACAAGTAGCCTTGGTTAGTCTTAGAGTTGCTGATGACTGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR CCA 90 bp GTGGTGCATAAGAGGCTGCATCCTACTCTAAATATTAATACTGTGCTGCTTTTGATGTGTATACAAGAATaGGGTGCTGGGAGGGCCTTG +
Preference number: 2 (lower is better)
Translates to: VVHKRLHPTLNINTVLLLMCIQE*GAGRAL
Trigger: CAAGGCCCTCCCAGCACCCCATTCTTGTATACACAT...CAAAAGCAGCACAGTATTAATATTTAGAGTAGGATGCAGCCTCTTATGCACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR TCA 90 bp TGGTGTTTAAGGTTTCTTCCCTATATGATATTCTACTCTTCCAGTCTAGGATTAAAGTACTTCCTGAGCTaGGCCAGAAAGCGCTGGTGC +
Preference number: 2 (lower is better)
Translates to: WCLRFLPYMIFYSSSLGLKYFLS*ARKRWC
Trigger: GCACCAGCGCTTTCTGGCTCAGCTCAGGAAGTACTT...TAATCCTAGACTGGAAGAGTAGAATATCATATAGGGAAGAAACCTTAAACACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR-3UTR GCA 90 bp CAGTCATCAGCAACTCTAAGACTAACCAAGGCTACTTGTCTCATTTTGCCTCCCTTGCTGGAATCTCTCTaGTCTTTCTTGAACATCCTT +
Preference number: 2 (lower is better)
Translates to: QSSATLRLTKATCLILPPLLESL*SFLNIL
Trigger: AAGGATGTTCAAGAAAGAGCAGAGAGATTCCAGCAA...GGGAGGCAAAATGAGACAAGTAGCCTTGGTTAGTCTTAGAGTTGCTGATGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR GCA 90 bp TTTGTAACGGAAAATCATGAGTGGGAACTATTGTCTTCTTTGGAGCCCCTCAGGCCAACATCTTATCCTTaGTGGAATCTCTCTGCTCTT +
Preference number: 2 (lower is better)
Translates to: FVTENHEWELLSSLEPLRPTSYP*WNLSAL
Trigger: AAGAGCAGAGAGATTCCAGCAAGGATAAGATGTTGG...CCTGAGGGGCTCCAAAGAAGACAATAGTTCCCACTCATGATTTTCCGTTACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR-3UTR CCA 90 bp AATACTGTGCTGCTTTTGCCAATCAACATTCTCTCCAAAAGCACACAAGCTCACAGAGCTAAGAACCAGTaGGTTTTCCTTTGGGGAGTT +
Preference number: 2 (lower is better)
Translates to: NTVLLLPINILSKSTQAHRAKNQ*VFLWGV
Trigger: AACTCCCCAAAGGAAAACCCACTGGTTCTTAGCTCT...GTGAGCTTGTGTGCTTTTGGAGAGAATGTTGATTGGCAAAAGCAGCACAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR CCA 90 bp TTTGTAACGGAAAATCATGAGTGGGAACTATTGTCTTCTTTGGAGCCCCTCAGGAAGTCCAAGACCAGATaGATTCACAGCCGAATTCTA +
Preference number: 2 (lower is better)
Translates to: FVTENHEWELLSSLEPLRKSKTR*IHSRIL
Trigger: TAGAATTCGGCTGTGAATCCATCTGGTCTTGGACTT...CCTGAGGGGCTCCAAAGAAGACAATAGTTCCCACTCATGATTTTCCGTTACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR-3UTR GCA 90 bp GTGGTGCATAAGAGGCTGCATCCTACTCTAAATATTAATACTGTGCTGCTTTTGTTTTCCAACCCTATGTaGAACTGCTGCCTGTACCTT +
Preference number: 2 (lower is better)
Translates to: VVHKRLHPTLNINTVLLLFSNPM*NCCLYL
Trigger: AAGGTACAGGCAGCAGTTGCACATAGGGTTGGAAAA...CAAAAGCAGCACAGTATTAATATTTAGAGTAGGATGCAGCCTCTTATGCACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR CCA 90 bp TTGTTCGTTCTAGATTTAACTGTGGTGCATAAGAGGCTGCATCCTACTCTAAATCAGCAAACAGAGATTTaGGCCTACCCTATTAGGCTC +
Preference number: 2 (lower is better)
Translates to: LFVLDLTVVHKRLHPTLNQQTEI*AYPIRL
Trigger: GAGCCTAATAGGGTAGGCCCAAATCTCTGTTTGCTG...ATTTAGAGTAGGATGCAGCCTCTTATGCACCACAGTTAAATCTAGAACGAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR CCA 90 bp GTGGTGCATAAGAGGCTGCATCCTACTCTAAATATTAATACTGTGCTGCTTTTGAACTATTGTCTTCTTTaGAGCCCCTCAGGACAACCT +
Preference number: 2 (lower is better)
Translates to: VVHKRLHPTLNINTVLLLNYCLL*SPSGQP
Trigger: AGGTTGTCCTGAGGGGCTCCAAAGAAGACAATAGTT...CAAAAGCAGCACAGTATTAATATTTAGAGTAGGATGCAGCCTCTTATGCACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR CCA 90 bp TGGTGTTTAAGGTTTCTTCCCTATATGATATTCTACTCTTCCAGTCTAGGATTACAGGATGACGAGGGATaGCTGAAAGGCGAAGGAACA +
Preference number: 2 (lower is better)
Translates to: WCLRFLPYMIFYSSSLGLQDDEG*LKGEGT
Trigger: TGTTCCTTCGCCTTTCAGCCATCCCTCGTCATCCTG...TAATCCTAGACTGGAAGAGTAGAATATCATATAGGGAAGAAACCTTAAACACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR-3UTR TCA 90 bp CTAGATTTAACTGTGGTGCATAAGAGGCTGCATCCTACTCTAAATATTAATACTTTCTTGAACATCCTTTaGTGCATCAGAGGGACGAAG +
Preference number: 2 (lower is better)
Translates to: LDLTVVHKRLHPTLNINTFLNIL*CIRGTK
Trigger: CTTCGTCCCTCTGATGCATCAAAGGATGTTCAAGAA...AGTATTAATATTTAGAGTAGGATGCAGCCTCTTATGCACCACAGTTAAATCTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR-3UTR TCA 90 bp CTAGATTTAACTGTGGTGCATAAGAGGCTGCATCCTACTCTAAATATTAATACTTCCCACCATATTATGTaGCATCTGAATGGGCAGATT +
Preference number: 2 (lower is better)
Translates to: LDLTVVHKRLHPTLNINTSHHIM*HLNGQI
Trigger: AATCTGCCCATTCAGATGTCACATAATATGGTGGGA...AGTATTAATATTTAGAGTAGGATGCAGCCTCTTATGCACCACAGTTAAATCTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR GCA 72 bp CCAGAAAGCGCTGGTGCAGGGTGCGGACACCTCTCTTaGTTGGGGTGTCCTGGGAGCTGGGCAGGAGGGGCC +
Preference number: 3 (lower is better)
Translates to: PESAGAGCGHLS*LGCPGSWAGGA
Trigger: GGCCCCTCCTGCCCAGCTCCCAGGACACCCCAAGCAAGAGAGGTGTCCGCACCCTGCACCAGCGCTTTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR CCA 72 bp AAAGCGCTGGTGCAGGGTGCGGACACCTCTCTTGCTTaGGGTGTCCTGGGAGCTGGGCAGGAGGGGCCGGTA +
Preference number: 3 (lower is better)
Translates to: KALVQGADTSLA*GVLGAGQEGPV
Trigger: TACCGGCCCCTCCTGCCCAGCTCCCAGGACACCCCAAGCAAGAGAGGTGTCCGCACCCTGCACCAGCGCTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR TCA 72 bp GGACCAGCGGAGGGGGCTCAGGACTTTGGCCTTGAATaGAATCATTGGAGGCCAACCATGCCCCAGCTGCCT +
Preference number: 3 (lower is better)
Translates to: GPAEGAQDFGLE*NHWRPTMPQLP
Trigger: AGGCAGCTGGGGCATGGTTGGCCTCCAATGATTTCATTCAAGGCCAAAGTCCTGAGCCCCCTCCGCTGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR CAA 90 bp CCTCCCGCCATGGCAGCTCGTGTCATCAGTCCTCCTCTACCTGCTGAGATGAAAGCTACTTGTCTCATTTaGCCTCCCTGCCCCTCCACC +
Preference number: 3 (lower is better)
Translates to: PPAMAARVISPPLPAEMKATCLI*PPCPST
Trigger: GGTGGAGGGGCAGGGAGGCAAAATGAGACAAGTAGC...TTTCATCTCAGCAGGTAGAGGAGGACTGATGACACGAGCTGCCATGGCGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR CAA 90 bp GACAAGGTGAGGCTGATTGGCCCAAGTTCCGGGTCCCTCCTTTCTTCAAGCACCGGTGCTGGGAGGGCCTaGAGGTTAATGCCTTGGACT +
Preference number: 3 (lower is better)
Translates to: DKVRLIGPSSGSLLSSSTGAGRA*RLMPWT
Trigger: AGTCCAAGGCATTAACCTCAAGGCCCTCCCAGCACC...GGTGCTTGAAGAAAGGAGGGACCCGGAACTTGGGCCAATCAGCCTCACCTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR CAA 90 bp TTTTCAGTGGTCTCTCCTGGGAGTTACAGGGCTCCTAGGGCCCAGATTCTCCTGCAGACCCAGGCGGCGTaGAAAGTAGTGGCCCAGGAT +
Preference number: 3 (lower is better)
Translates to: FSVVSPGSYRAPRAQILLQTQAA*KVVAQD
Trigger: ATCCTGGGCCACTACTTTCAACGCCGCCTGGGTCTG...CAGGAGAATCTGGGCCCTAGGAGCCCTGTAACTCCCAGGAGAGACCACTGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR TCA 72 bp GGCAGAGTGAGGAGAGAGGCTGAGCTCCTAATGAGGTaGGCTGTGCTAACTGAACACAGCCTGGCAGTGCCC +
Preference number: 3 (lower is better)
Translates to: GRVRREAELLMR*AVLTEHSLAVP
Trigger: GGGCACTGCCAGGCTGTGTTCAGTTAGCACAGCTCACCTCATTAGGAGCTCAGCCTCTCTCCTCACTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR TCA 72 bp TGGCGGAACACTCGCATGTTGAAGTACTTCCTGAGCTaGGCCAGAAAGCGCTGGTGCAGGGTGCGGACACCT +
Preference number: 3 (lower is better)
Translates to: WRNTRMLKYFLS*ARKRWCRVRTP
Trigger: AGGTGTCCGCACCCTGCACCAGCGCTTTCTGGCTCAGCTCAGGAAGTACTTCAACATGCGAGTGTTCCGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR CCA 72 bp TCTTCTTTGGAGCCCCTCAGGACAACCTCATCCTCCTaGCCCGGGGATGACCCTGCCTTAAGGTGGCAAGTT +
Preference number: 3 (lower is better)
Translates to: SSLEPLRTTSSS*PGDDPALRWQV
Trigger: AACTTGCCACCTTAAGGCAGGGTCATCCCCGGGCCAGGAGGATGAGGTTGTCCTGAGGGGCTCCAAAGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR GCA 72 bp ATGGAGGCCAATGAAAGCAACGGCAGCCCCCGCGGTTaGTGTGATTCGGCAGCCCAAACGGTCAGTGAATAT +
Preference number: 3 (lower is better)
Translates to: MEANESNGSPRG*CDSAAQTVSEY
Trigger: ATATTCACTGACCGTTTGGGCTGCCGAATCACAGCAACCGCGGGGGCTGCCGTTGCTTTCATTGGCCTCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR CCA 72 bp CAAAGTGGCCTAGGATGCCCAGCATGGGAGACACATTaGGTGGTAAAGGCTGGGATGGCTTCCCCTTCCCAA +
Preference number: 3 (lower is better)
Translates to: QSGLGCPAWETH*VVKAGMASPSQ
Trigger: TTGGGAAGGGGAAGCCATCCCAGCCTTTACCACCCAATGTGTCTCCCATGCTGGGCATCCTAGGCCACTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR CCA 72 bp GCGGCGTTGAAAGTAGTGGCCCAGGATGACGAGGGATaGCTGAAAGGCGAAGGAACAGCCACAACCAAAGAG +
Preference number: 3 (lower is better)
Translates to: AALKVVAQDDEG*LKGEGTATTKE
Trigger: CTCTTTGGTTGTGGCTGTTCCTTCGCCTTTCAGCCATCCCTCGTCATCCTGGGCCACTACTTTCAACGCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR-3UTR CAA 90 bp GTCACCTACTTCAGAGGGATCAAAGTGGTTCAGAGTCTACCTTTCATGGCACCTGCAGACACCACACCATaGGCCAGACCCAGGCGGCGT +
Preference number: 3 (lower is better)
Translates to: VTYFRGIKVVQSLPFMAPADTTP*ARPRRR
Trigger: ACGCCGCCTGGGTCTGGCCAATGGTGTGGTGTCTGC...AGGTGCCATGAAAGGTAGACTCTGAACCACTTTGATCCCTCTGAAGTAGGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR CCA 72 bp AGTGTTAGGAGTGGACTGGGACAAGGTGAGGCTGATTaGCCCAAGTTCCGGGTCCCTCCTTTCTTCAAGCAC +
Preference number: 3 (lower is better)
Translates to: SVRSGLGQGEAD*PKFRVPPFFKH
Trigger: GTGCTTGAAGAAAGGAGGGACCCGGAACTTGGGCCAATCAGCCTCACCTTGTCCCAGTCCACTCCTAACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR CCA 72 bp ATGCCCTCTAAGCAAAGTGGCCTAGGATGCCCAGCATaGGAGACACATTGGGTGGTAAAGGCTGGGATGGCT +
Preference number: 3 (lower is better)
Translates to: MPSKQSGLGCPA*ETHWVVKAGMA
Trigger: AGCCATCCCAGCCTTTACCACCCAATGTGTCTCCCATGCTGGGCATCCTAGGCCACTTTGCTTAGAGGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR CAA 90 bp GTCACCTACTTCAGAGGGATCAAAGTGGTTCAGAGTCTACCTTTCATGGCACCTGTGCGGACACCTCTCTaGCTTGGGGTGTCCTGGGAG +
Preference number: 3 (lower is better)
Translates to: VTYFRGIKVVQSLPFMAPVRTPL*LGVSWE
Trigger: CTCCCAGGACACCCCAAGCAAGAGAGGTGTCCGCAC...AGGTGCCATGAAAGGTAGACTCTGAACCACTTTGATCCCTCTGAAGTAGGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR-3UTR CAA 90 bp GGAGACACATTGGGTGGTAAAGGCTGGGATGGCTTCCCCTTCCCAAAAGAAATTCCTGTGAGGCCTGCATaGGGCCCACCAGCTCAAATG +
Preference number: 3 (lower is better)
Translates to: GDTLGGKGWDGFPFPKEIPVRPA*GPPAQM
Trigger: CATTTGAGCTGGTGGGCCCAATGCAGGCCTCACAGG...AATTTCTTTTGGGAAGGGGAAGCCATCCCAGCCTTTACCACCCAATGTGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR TCA 72 bp CCTGGAGCTTTGACTCCAAGGAGATTGTCAGGTGGCTaGAATGCTGTGTGCGCAGGTCTGGGAACAAGTGTG +
Preference number: 3 (lower is better)
Translates to: PGALTPRRLSGG*NAVCAGLGTSV
Trigger: CACACTTGTTCCCAGACCTGCGCACACAGCATTTCAGCCACCTGACAATCTCCTTGGAGTCAAAGCTCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR GCA 72 bp AAACTGAGAGATGGGGCTCACCATATCAATAACTACTaGCCCTCCTCCCGCCATGGCAGCTCGTGTCATCAG +
Preference number: 3 (lower is better)
Translates to: KLRDGAHHINNY*PSSRHGSSCHQ
Trigger: CTGATGACACGAGCTGCCATGGCGGGAGGAGGGGCAGTAGTTATTGATATGGTGAGCCCCATCTCTCAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR CCA 72 bp CCTACCCACAGAGCTAAGAACCAGTGGGTTTTCCTTTaGGGAGTTGATAAGAGCTGGACTGGGACCAGCGGA +
Preference number: 3 (lower is better)
Translates to: PTHRAKNQWVFL*GVDKSWTGTSG
Trigger: TCCGCTGGTCCCAGTCCAGCTCTTATCAACTCCCCAAAGGAAAACCCACTGGTTCTTAGCTCTGTGGGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR CAA 90 bp GGCATAAGGAGGCATCAGTCACCTACTTCAGAGGGATCAAAGTGGTTCAGAGTCGCTACTTGTCTCATTTaGCCTCCCTGCCCCTCCACC +
Preference number: 3 (lower is better)
Translates to: GIRRHQSPTSEGSKWFRVATCLI*PPCPST
Trigger: GGTGGAGGGGCAGGGAGGCAAAATGAGACAAGTAGC...GACTCTGAACCACTTTGATCCCTCTGAAGTAGGTGACTGATGCCTCCTTATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR CAA 90 bp GGGCTCAGGACTTTGGCCTTGAATGAAATCATTGGAGGCCAACCATGCCCCAGCGAACTATTGTCTTCTTaGGAGCCCCTCAGGACAACC +
Preference number: 3 (lower is better)
Translates to: GLRTLALNEIIGGQPCPSELLSS*EPLRTT
Trigger: GGTTGTCCTGAGGGGCTCCAAAGAAGACAATAGTTC...GCTGGGGCATGGTTGGCCTCCAATGATTTCATTCAAGGCCAAAGTCCTGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR GCA 72 bp AGCTTTGACTCCAAGGAGATTGTCAGGTGGCTGAAATaGTGTGTGCGCAGGTCTGGGAACAAGTGTGCTGGT +
Preference number: 3 (lower is better)
Translates to: SFDSKEIVRWLK*CVRRSGNKCAG
Trigger: ACCAGCACACTTGTTCCCAGACCTGCGCACACAGCATTTCAGCCACCTGACAATCTCCTTGGAGTCAAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR GCA 72 bp GCACCTTTAATGCCCTCTAAGCAAAGTGGCCTAGGATaGCCAGCATGGGAGACACATTGGGTGGTAAAGGCT +
Preference number: 3 (lower is better)
Translates to: APLMPSKQSGLG*PAWETHWVVKA
Trigger: AGCCTTTACCACCCAATGTGTCTCCCATGCTGGGCATCCTAGGCCACTTTGCTTAGAGGGCATTAAAGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR CAA 90 bp GAATGGGGTGCTGGGAGGGCCTTGAGGTTAATGCCTTGGACTGTAAGATTTGTAGATGCGGTAAGTGCGTaGGCGGAACACTCGCATGTT +
Preference number: 3 (lower is better)
Translates to: EWGAGRALRLMPWTVRFVDAVSA*AEHSHV
Trigger: AACATGCGAGTGTTCCGCCAACGCACTTACCGCATC...TACAAATCTTACAGTCCAAGGCATTAACCTCAAGGCCCTCCCAGCACCCCATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR-3UTR CAA 90 bp AGGTCTGGGAACAAGTGTGCTGGTGGCAAAAATGTAAATGCTGAGCAGGGTGGGAAGAAAGGCATTAGATaGGTTCCTCAGGGTTGGGGG +
Preference number: 3 (lower is better)
Translates to: RSGNKCAGGKNVNAEQGGKKGIR*VPQGWG
Trigger: CCCCCAACCCTGAGGAACCAATCTAATGCCTTTCTT...CCCACCCTGCTCAGCATTTACATTTTTGCCACCAGCACACTTGTTCCCAGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR CAA 90 bp GCCATGGCAGCTCGTGTCATCAGTCCTCCTCTACCTGCTGAGATGAAAGGAGTTGACACAGTAGCACCTTaGGCAGTTGATTATAGTGGG +
Preference number: 3 (lower is better)
Translates to: AMAARVISPPLPAEMKGVDTVAP*AVDYSG
Trigger: CCCACTATAATCAACTGCCAAAGGTGCTACTGTGTC...AACTCCTTTCATCTCAGCAGGTAGAGGAGGACTGATGACACGAGCTGCCATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR CAA 90 bp CTTCAGAGGGATCAAAGTGGTTCAGAGTCTACCTTTCATGGCACCTTTAATGCCGCTACTTGTCTCATTTaGCCTCCCTGCCCCTCCACC +
Preference number: 3 (lower is better)
Translates to: LQRDQSGSESTFHGTFNAATCLI*PPCPST
Trigger: GGTGGAGGGGCAGGGAGGCAAAATGAGACAAGTAGC...GGCATTAAAGGTGCCATGAAAGGTAGACTCTGAACCACTTTGATCCCTCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR CAA 90 bp GGGAAAGGGCACACAATGGCAAGAAAGGCATTAGATTGGTTCCTCAGGGTTGGGGCCAACATCTTATCCTaGCTGGAATCTCTCTGCTCT +
Preference number: 3 (lower is better)
Translates to: GKGHTMARKALDWFLRVGANILS*LESLCS
Trigger: AGAGCAGAGAGATTCCAGCAAGGATAAGATGTTGGC...CCCAACCCTGAGGAACCAATCTAATGCCTTTCTTGCCATTGTGTGCCCTTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR CAA 90 bp GAATGGGGTGCTGGGAGGGCCTTGAGGTTAATGCCTTGGACTGTAAGATTTGTAGGAACACCTGGAGCTTaGACTCCAAGGAGATTGTCA +
Preference number: 3 (lower is better)
Translates to: EWGAGRALRLMPWTVRFVGTPGA*TPRRLS
Trigger: TGACAATCTCCTTGGAGTCAAAGCTCCAGGTGTTCC...TACAAATCTTACAGTCCAAGGCATTAACCTCAAGGCCCTCCCAGCACCCCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR CAA 90 bp GGGAAAGGGCACACAATGGCAAGAAAGGCATTAGATTGGTTCCTCAGGGTTGGGACTAACCAAGGCTACTaGTCTCATTTTGCCTCCCTG +
Preference number: 3 (lower is better)
Translates to: GKGHTMARKALDWFLRVGTNQGY*SHFASL
Trigger: CAGGGAGGCAAAATGAGACAAGTAGCCTTGGTTAGT...CCCAACCCTGAGGAACCAATCTAATGCCTTTCTTGCCATTGTGTGCCCTTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR CAA 90 bp GGGCTCCTAGGGCCCAGATTCTCCTGTTCCACTACTGTTAGAACTGACAGGATAAGGGGGCTCAGGACTTaGGCCTTGAATGAAATCATT +
Preference number: 3 (lower is better)
Translates to: GLLGPRFSCSTTVRTDRIRGLRT*ALNEII
Trigger: AATGATTTCATTCAAGGCCAAAGTCCTGAGCCCCCT...TATCCTGTCAGTTCTAACAGTAGTGGAACAGGAGAATCTGGGCCCTAGGAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR CCA 72 bp TTAGAAAGTATATGGAGAGGTTCCAAAGGCCAGGGGTaGTTCCCAAGCTTTCCCAGATCCTGGGAGGAGAAA +
Preference number: 3 (lower is better)
Translates to: LESIWRGSKGQG*FPSFPRSWEEK
Trigger: TTTCTCCTCCCAGGATCTGGGAAAGCTTGGGAACCACCCCTGGCCTTTGGAACCTCTCCATATACTTTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR CCA 72 bp GGCAGATTTGGGACCTATGAATGTCTTCCCTTCATCTaGAGAGAAGTGGGCGACTGCCTGATTCTTAAGAGC +
Preference number: 3 (lower is better)
Translates to: GRFGTYECLPFI*REVGDCLILKS
Trigger: GCTCTTAAGAATCAGGCAGTCGCCCACTTCTCTCCAGATGAAGGGAAGACATTCATAGGTCCCAAATCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR CCA 72 bp AGCAGCATAAGAACAAACATGAAGGTACTCAGCACCTaGAAGGTTTGGGCCAGCTTGATCTTATCCCCCAGC +
Preference number: 3 (lower is better)
Translates to: SSIRTNMKVLST*KVWASLILSPS
Trigger: GCTGGGGGATAAGATCAAGCTGGCCCAAACCTTCCAGGTGCTGAGTACCTTCATGTTTGTTCTTATGCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR-3UTR CAA 90 bp CCCCAGAGCTTAGAAAGTATATGGAGAGGTTCCAAAGGCCAGGGGTGGTTCCCATTTCTTGAACATCCTTaGATGCATCAGAGGGACGAA +
Preference number: 3 (lower is better)
Translates to: PQSLESIWRGSKGQGWFPFLEHP*MHQRDE
Trigger: TTCGTCCCTCTGATGCATCAAAGGATGTTCAAGAAA...TGGGAACCACCCCTGGCCTTTGGAACCTCTCCATATACTTTCTAAGCTCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR CAA 90 bp GGCATAAGGAGGCATCAGTCACCTACTTCAGAGGGATCAAAGTGGTTCAGAGTCGCCAACATCTTATCCTaGCTGGAATCTCTCTGCTCT +
Preference number: 3 (lower is better)
Translates to: GIRRHQSPTSEGSKWFRVANILS*LESLCS
Trigger: AGAGCAGAGAGATTCCAGCAAGGATAAGATGTTGGC...GACTCTGAACCACTTTGATCCCTCTGAAGTAGGTGACTGATGCCTCCTTATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR-3UTR CAA 90 bp CACTGCTTGTACCCAGTTCTTGGGAAGCCACAGTCATCAGCAACTCTAAGACTAGGAACACCTGGAGCTTaGACTCCAAGGAGATTGTCA +
Preference number: 3 (lower is better)
Translates to: HCLYPVLGKPQSSATLRLGTPGA*TPRRLS
Trigger: TGACAATCTCCTTGGAGTCAAAGCTCCAGGTGTTCC...TAGTCTTAGAGTTGCTGATGACTGTGGCTTCCCAAGAACTGGGTACAAGCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR CAA 90 bp ACCAACCATACAATAAGGGCACTGCTTGTACCCAGTTCTTGGGAAGCCACAGTCACTAACCAAGGCTACTaGTCTCATTTTGCCTCCCTG +
Preference number: 3 (lower is better)
Translates to: TNHTIRALLVPSSWEATVTNQGY*SHFASL
Trigger: CAGGGAGGCAAAATGAGACAAGTAGCCTTGGTTAGT...GACTGTGGCTTCCCAAGAACTGGGTACAAGCAGTGCCCTTATTGTATGGTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR CAA 90 bp CTACCCACAGAGCTAAGAACCAGTGGGTTTTCCTTTGGGGAGTTGATAAGAGCTCATGAGTGGGAACTATaGTCTTCTTTGGAGCCCCTC +
Preference number: 3 (lower is better)
Translates to: LPTELRTSGFSFGELIRAHEWEL*SSLEPL
Trigger: GAGGGGCTCCAAAGAAGACAATAGTTCCCACTCATG...AGCTCTTATCAACTCCCCAAAGGAAAACCCACTGGTTCTTAGCTCTGTGGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR TCA 72 bp CATGGCAGCTCGTGTCATCAGTCCTCCTCTACCTGCTaGGATGAAAGGAGTTTCTTCACATTTTGCCATGTG +
Preference number: 3 (lower is better)
Translates to: HGSSCHQSSSTC*DERSFFTFCHV
Trigger: CACATGGCAAAATGTGAAGAAACTCCTTTCATCTCAGCAGGTAGAGGAGGACTGATGACACGAGCTGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR CCA 72 bp AGAACAAACATGAAGGTACTCAGCACCTGGAAGGTTTaGGCCAGCTTGATCTTATCCCCCAGCATTCTGATG +
Preference number: 3 (lower is better)
Translates to: RTNMKVLSTWKV*ASLILSPSILM
Trigger: CATCAGAATGCTGGGGGATAAGATCAAGCTGGCCCAAACCTTCCAGGTGCTGAGTACCTTCATGTTTGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR-3UTR CAA 90 bp CTACCCACAGAGCTAAGAACCAGTGGGTTTTCCTTTGGGGAGTTGATAAGAGCTGACACAGTAGCACCTTaGGCAGTTGATTATAGTGGG +
Preference number: 3 (lower is better)
Translates to: LPTELRTSGFSFGELIRADTVAP*AVDYSG
Trigger: CCCACTATAATCAACTGCCAAAGGTGCTACTGTGTC...AGCTCTTATCAACTCCCCAAAGGAAAACCCACTGGTTCTTAGCTCTGTGGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR CAA 90 bp TTTGTAACGGAAAATCATGAGTGGGAACTATTGTCTTCTTTGGAGCCCCTCAGGAAGGTTTGGGCCAGCTaGATCTTATCCCCCAGCATT +
Preference number: 3 (lower is better)
Translates to: FVTENHEWELLSSLEPLRKVWAS*ILSPSI
Trigger: AATGCTGGGGGATAAGATCAAGCTGGCCCAAACCTT...CCTGAGGGGCTCCAAAGAAGACAATAGTTCCCACTCATGATTTTCCGTTACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR TCA 72 bp GTCTTCCCTTCATCTGGAGAGAAGTGGGCGACTGCCTaGTTCTTAAGAGCCATCTGCATCTTAAGCAACAAA +
Preference number: 3 (lower is better)
Translates to: VFPSSGEKWATA*FLRAICILSNK
Trigger: TTTGTTGCTTAAGATGCAGATGGCTCTTAAGAATCAGGCAGTCGCCCACTTCTCTCCAGATGAAGGGAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR TCA 72 bp AATACACACCAAGAGCACCCAGGTCTCCTTGATTTCTaGGAACTCCTCCTCCACATACTTCATCAGGTGTAC +
Preference number: 3 (lower is better)
Translates to: NTHQEHPGLLDF*ELLLHILHQVY
Trigger: GTACACCTGATGAAGTATGTGGAGGAGGAGTTCTCAGAAATCAAGGAGACCTGGGTGCTCTTGGTGTGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR GCA 72 bp TTCTTCACATTTTGCCATGTGTATACAAGAATGGGGTaGTGGGAGGGCCTTGAGGTTAATGCCTTGGACTGT +
Preference number: 3 (lower is better)
Translates to: FFTFCHVYTRMG*WEGLEVNALDC
Trigger: ACAGTCCAAGGCATTAACCTCAAGGCCCTCCCAGCACCCCATTCTTGTATACACATGGCAAAATGTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR GCA 72 bp ACTTTGGCCTTGAATGAAATCATTGGAGGCCAACCATaGCCCAGCTGCCTGTTTGTAACGGAAAATCATGAG +
Preference number: 3 (lower is better)
Translates to: TLALNEIIGGQP*PSCLFVTENHE
Trigger: CTCATGATTTTCCGTTACAAACAGGCAGCTGGGGCATGGTTGGCCTCCAATGATTTCATTCAAGGCCAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR GCA 72 bp GAATGTCTTCCCTTCATCTGGAGAGAAGTGGGCGACTaGCTGATTCTTAAGAGCCATCTGCATCTTAAGCAA +
Preference number: 3 (lower is better)
Translates to: ECLPFIWREVGD*LILKSHLHLKQ
Trigger: TTGCTTAAGATGCAGATGGCTCTTAAGAATCAGGCAGTCGCCCACTTCTCTCCAGATGAAGGGAAGACATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR CCA 72 bp GAATGGGGTGCTGGGAGGGCCTTGAGGTTAATGCCTTaGACTGTAAGATTTGTAAAAATCAGTGACTGGAAC +
Preference number: 3 (lower is better)
Translates to: EWGAGRALRLMP*TVRFVKISDWN
Trigger: GTTCCAGTCACTGATTTTTACAAATCTTACAGTCCAAGGCATTAACCTCAAGGCCCTCCCAGCACCCCATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR CCA 72 bp TTCACATTTTGCCATGTGTATACAAGAATGGGGTGCTaGGAGGGCCTTGAGGTTAATGCCTTGGACTGTAAG +
Preference number: 3 (lower is better)
Translates to: FTFCHVYTRMGC*EGLEVNALDCK
Trigger: CTTACAGTCCAAGGCATTAACCTCAAGGCCCTCCCAGCACCCCATTCTTGTATACACATGGCAAAATGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR CAA 90 bp AATACTGTGCTGCTTTTGCCAATCAACATTCTCTCCAAAAGCACACAAGCTCACTCTTCAGTAAGACTGTaGCCAGAGCCTGGGCATAAG +
Preference number: 3 (lower is better)
Translates to: NTVLLLPINILSKSTQAHSSVRL*PEPGHK
Trigger: CTTATGCCCAGGCTCTGGCAACAGTCTTACTGAAGA...GTGAGCTTGTGTGCTTTTGGAGAGAATGTTGATTGGCAAAAGCAGCACAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR-3UTR CAA 90 bp ACAAGAATGGGGTGCTGGGAGGGCCTTGAGGTTAATGCCTTGGACTGTAAGATTCTAGGATTATATAGCTaGAGCGAAAAAGTGAGATGT +
Preference number: 3 (lower is better)
Translates to: TRMGCWEGLEVNALDCKILGLYS*SEKVRC
Trigger: ACATCTCACTTTTTCGCTCAAGCTATATAATCCTAG...AATCTTACAGTCCAAGGCATTAACCTCAAGGCCCTCCCAGCACCCCATTCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR-3UTR CAA 90 bp TTGTTCGTTCTAGATTTAACTGTGGTGCATAAGAGGCTGCATCCTACTCTAAATCAGCACCTGGAAGGTTaGGGCCAGCTTGATCTTATC +
Preference number: 3 (lower is better)
Translates to: LFVLDLTVVHKRLHPTLNQHLEG*GQLDLI
Trigger: GATAAGATCAAGCTGGCCCAAACCTTCCAGGTGCTG...ATTTAGAGTAGGATGCAGCCTCTTATGCACCACAGTTAAATCTAGAACGAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR-3UTR CAA 90 bp CGTGTCATCAGTCCTCCTCTACCTGCTGAGATGAAAGGAGTTTCTTCACATTTTTTTCTTGAACATCCTTaGATGCATCAGAGGGACGAA +
Preference number: 3 (lower is better)
Translates to: RVISPPLPAEMKGVSSHFFLEHP*MHQRDE
Trigger: TTCGTCCCTCTGATGCATCAAAGGATGTTCAAGAAA...AAAATGTGAAGAAACTCCTTTCATCTCAGCAGGTAGAGGAGGACTGATGACACG
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000590447.1
ENST00000636771.1
3UTR CAA 72 bp GAAAGCGCTGGTGCAGGGTGCGGACACCTCTCTTGCTaGGGGTGTCCTGGGAGCTGGGCAGGAGGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: ESAGAGCGHLSC*GCPGSWAGGAG
Trigger: ACCGGCCCCTCCTGCCCAGCTCCCAGGACACCCCAAGCAAGAGAGGTGTCCGCACCCTGCACCAGCGCTTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636771.1
CDS-3UTR CCA 90 bp AGCCAGAAAGCGCTGGTGCAGGGTGCGGACACCTCTCTTGCTTGGGGTGTCCTGTTGCTTGGGGTGTCCTaGGAGCTGGGCAGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SQKALVQGADTSLAWGVLLLGVS*ELGRRG
Trigger: GCCCCTCCTGCCCAGCTCCCAGGACACCCCAAGCAA...CAGGACACCCCAAGCAAGAGAGGTGTCCGCACCCTGCACCAGCGCTTTCTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636771.1
CDS-3UTR GCA 90 bp AGGCCAGGGGTGGTTCCCAAGCTTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGGCCAGAAAGCGCTGGTaGAGGGTGCGGACACCTCTC +
Preference number: 4 (lower is better)
Translates to: RPGVVPKLSQILGGERPWARKRW*RVRTPL
Trigger: GAGAGGTGTCCGCACCCTGCACCAGCGCTTTCTGGC...CCAGGGCCTTTCTCCTCCCAGGATCTGGGAAAGCTTGGGAACCACCCCTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp AGGCCAGGGGTGGTTCCCAAGCTTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGACAACCTCATCCTCCTaGCCCGGGGATGACCCTGCC +
Preference number: 4 (lower is better)
Translates to: RPGVVPKLSQILGGERPWTTSSS*PGDDPA
Trigger: GGCAGGGTCATCCCCGGGCCAGGAGGATGAGGTTGT...CCAGGGCCTTTCTCCTCCCAGGATCTGGGAAAGCTTGGGAACCACCCCTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp AATGACCTCCTCAGCAAACAGAGATTTGGGCCTACCCTATTAGGCTCCTGGGGACCACCTTCGGGAGGCTaGAAGCCGCGCGCGGTGCCG +
Preference number: 4 (lower is better)
Translates to: NDLLSKQRFGPTLLGSWGPPSGG*KPRAVP
Trigger: CGGCACCGCGCGCGGCTTCCAGCCTCCCGAAGGTGG...TCCCCAGGAGCCTAATAGGGTAGGCCCAAATCTCTGTTTGCTGAGGAGGTCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR CAA 72 bp AGCAGACACCACACCATTGGCCAGACCCAGGCGGCGTaGAAAGTAGTGGCCCAGGATGACGAGGGATGGCTG +
Preference number: 4 (lower is better)
Translates to: SRHHTIGQTQAA*KVVAQDDEGWL
Trigger: CAGCCATCCCTCGTCATCCTGGGCCACTACTTTCAACGCCGCCTGGGTCTGGCCAATGGTGTGGTGTCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636771.1
CDS-3UTR TCA 90 bp AGGCCAGGGGTGGTTCCCAAGCTTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGAGAGAATCCCGTAGGTaGAGTAGCGCAGGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: RPGVVPKLSQILGGERPWRESRR*SSAGLG
Trigger: CCCTAAGCCTGCGCTACTTCACCTACGGGATTCTCT...CCAGGGCCTTTCTCCTCCCAGGATCTGGGAAAGCTTGGGAACCACCCCTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp GGAGTGGACTGGGACAAGGTGAGGCTGATTGGCCCAAGTTCCGGGTCCCTCCTTAGTAGTGGCCCAGGATaGCGAGGGATGGCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: GVDWDKVRLIGPSSGSLLSSGPG*RGMAER
Trigger: CCTTTCAGCCATCCCTCGTCATCCTGGGCCACTACT...AAGGAGGGACCCGGAACTTGGGCCAATCAGCCTCACCTTGTCCCAGTCCACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp GGCCAGGGGTGGTTCCCAAGCTTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGATGGCTCAGCCTGAGATaGGTGGGACTGATGCTAGTG +
Preference number: 4 (lower is better)
Translates to: GQGWFPSFPRSWEEKGPGWLSLR*VGLMLV
Trigger: CACTAGCATCAGTCCCACTCATCTCAGGCTGAGCCA...TCCAGGGCCTTTCTCCTCCCAGGATCTGGGAAAGCTTGGGAACCACCCCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp GGAGTGGACTGGGACAAGGTGAGGCTGATTGGCCCAAGTTCCGGGTCCCTCCTTCACAAAGAGGCAGAGTaGGGAGAGAGGCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: GVDWDKVRLIGPSSGSLLHKEAE*GERLSS
Trigger: GGAGCTCAGCCTCTCTCCTCACTCTGCCTCTTTGTG...AAGGAGGGACCCGGAACTTGGGCCAATCAGCCTCACCTTGTCCCAGTCCACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR GCA 90 bp AGGTCTGGGAACAAGTGTGCTGGTGGCAAAAATGTAAATGCTGAGCAGGGTGGGTGCTCGGAGGGCTGCTaGTGCCGCTGCCGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: RSGNKCAGGKNVNAEQGGCSEGC*CRCRCL
Trigger: GAGGCAGCGGCAGCGGCAGCAGCAGCCCTCCGAGCA...CCCACCCTGCTCAGCATTTACATTTTTGCCACCAGCACACTTGTTCCCAGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587091.6
CDS-3UTR GCA 90 bp GGCATTGTTGCTCCAGTATTTTCAGTGGTCTCTCCTGGGAGTTACAGGGCTCCTTCGCTCGCCTGGCTTTaGAGCGCCATCGCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GIVAPVFSVVSPGSYRAPSLAWL*SAIAAG
Trigger: CCCCGCCGCGATGGCGCTGCAAAGCCAGGCGAGCGA...AGGAGCCCTGTAACTCCCAGGAGAGACCACTGAAAATACTGGAGCAACAATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587091.6
CDS-3UTR CCA 90 bp TTTTCAGTGGTCTCTCCTGGGAGTTACAGGGCTCCTAGGGCCCAGATTCTCCTGTTGCTTGGGGTGTCCTaGGAGCTGGGCAGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: FSVVSPGSYRAPRAQILLLLGVS*ELGRRG
Trigger: GCCCCTCCTGCCCAGCTCCCAGGACACCCCAAGCAA...CAGGAGAATCTGGGCCCTAGGAGCCCTGTAACTCCCAGGAGAGACCACTGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp GGAGTGGACTGGGACAAGGTGAGGCTGATTGGCCCAAGTTCCGGGTCCCTCCTTCCAGGAGGTAGCCAATaGCCTGTGAGGCCTGCATTG +
Preference number: 4 (lower is better)
Translates to: GVDWDKVRLIGPSSGSLLPGGSQ*PVRPAL
Trigger: CAATGCAGGCCTCACAGGCCATTGGCTACCTCCTGG...AAGGAGGGACCCGGAACTTGGGCCAATCAGCCTCACCTTGTCCCAGTCCACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR CAA 72 bp GACTGGGACCAGCGGAGGGGGCTCAGGACTTTGGCCTaGAATGAAATCATTGGAGGCCAACCATGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: DWDQRRGLRTLA*NEIIGGQPCPS
Trigger: GCTGGGGCATGGTTGGCCTCCAATGATTTCATTCAAGGCCAAAGTCCTGAGCCCCCTCCGCTGGTCCCAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR GCA 90 bp GACAAGGTGAGGCTGATTGGCCCAAGTTCCGGGTCCCTCCTTTCTTCAAGCACCTGCGGACACCTCTCTTaGTTGGGGTGTCCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: DKVRLIGPSSGSLLSSSTCGHLS*LGCPGS
Trigger: GCTCCCAGGACACCCCAAGCAAGAGAGGTGTCCGCA...GGTGCTTGAAGAAAGGAGGGACCCGGAACTTGGGCCAATCAGCCTCACCTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR GCA 90 bp TTCCAAAGGCCAGGGGTGGTTCCCAAGCTTTCCCAGATCCTGGGAGGAGAAAGGAGCGCTGGTGCAGGGTaGGGACACCTCTCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: FQRPGVVPKLSQILGGERSAGAG*GHLSCL
Trigger: CAAGCAAGAGAGGTGTCCGCACCCTGCACCAGCGCT...CCTTTCTCCTCCCAGGATCTGGGAAAGCTTGGGAACCACCCCTGGCCTTTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR GCA 90 bp GGAGACACATTGGGTGGTAAAGGCTGGGATGGCTTCCCCTTCCCAAAAGAAATTTCGGAGGGCTGCTGCTaGCGCTGCCGCTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GDTLGGKGWDGFPFPKEISEGCC*RCRCLL
Trigger: GAGGAGGCAGCGGCAGCGGCAGCAGCAGCCCTCCGA...AATTTCTTTTGGGAAGGGGAAGCCATCCCAGCCTTTACCACCCAATGTGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587091.6
CDS-3UTR GCA 90 bp GATTGGCCCAAGTTCCGGGTCCCTCCTTTCTTCAAGCACCCATGTGTCTATGACTGCTGCAGCTGCTGCTaGTCGGAGGGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: DWPKFRVPPFFKHPCVYDCCSCC*SEGCCC
Trigger: GCAGCAGCAGCCCTCCGAGCAGCAGCAGCTGCAGCA...GTCATAGACACATGGGTGCTTGAAGAAAGGAGGGACCCGGAACTTGGGCCAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587091.6
CDS-3UTR GCA 90 bp GGCCAGGGGTGGTTCCCAAGCTTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGACAAAGTGGCCTAGGATaGCCAGCATGGGAGACACAT +
Preference number: 4 (lower is better)
Translates to: GQGWFPSFPRSWEEKGPGQSGLG*PAWETH
Trigger: ATGTGTCTCCCATGCTGGGCATCCTAGGCCACTTTG...TCCAGGGCCTTTCTCCTCCCAGGATCTGGGAAAGCTTGGGAACCACCCCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR GCA 90 bp CTCCTCCCCCAGAGCTTAGAAAGTATATGGAGAGGTTCCAAAGGCCAGGGGTGGAACACAGCCTGGCAGTaGCCTCTGCCCCTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LLPQSLESIWRGSKGQGWNTAWQ*PLPLAR
Trigger: CCTGGCTAGGGGCAGAGGGCACTGCCAGGCTGTGTT...CCACCCCTGGCCTTTGGAACCTCTCCATATACTTTCTAAGCTCTGGGGGAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp CCCTCTAAGCAAAGTGGCCTAGGATGCCCAGCATGGGAGACACATTGGGTGGTAAGCCGTTGCACCAGGTaGCAGCGAACACCACCACCC +
Preference number: 4 (lower is better)
Translates to: PSKQSGLGCPAWETHWVVSRCTR*QRTPPP
Trigger: GGGTGGTGGTGTTCGCTGCCACCTGGTGCAACGGCT...TACCACCCAATGTGTCTCCCATGCTGGGCATCCTAGGCCACTTTGCTTAGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp GGAGTGGACTGGGACAAGGTGAGGCTGATTGGCCCAAGTTCCGGGTCCCTCCTTAGATTGTCAGGTGGCTaGAATGCTGTGTGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: GVDWDKVRLIGPSSGSLLRLSGG*NAVCAG
Trigger: ACCTGCGCACACAGCATTTCAGCCACCTGACAATCT...AAGGAGGGACCCGGAACTTGGGCCAATCAGCCTCACCTTGTCCCAGTCCACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp GGCATTGTTGCTCCAGTATTTTCAGTGGTCTCTCCTGGGAGTTACAGGGCTCCTCCCCCGCGGTTGCTGTaGTTCGGCAGCCCAAACGGT +
Preference number: 4 (lower is better)
Translates to: GIVAPVFSVVSPGSYRAPPPRLL*FGSPNG
Trigger: ACCGTTTGGGCTGCCGAATCACAGCAACCGCGGGGG...AGGAGCCCTGTAACTCCCAGGAGAGACCACTGAAAATACTGGAGCAACAATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp TTGTTGCTCCAGTATTTTCAGTGGTCTCTCCTGGGAGTTACAGGGCTCCTAGGGCCCCCGCGGTTGCTGTaGTTCGGCAGCCCAAACGGT +
Preference number: 4 (lower is better)
Translates to: LLLQYFQWSLLGVTGLLGPPRLL*FGSPNG
Trigger: ACCGTTTGGGCTGCCGAATCACAGCAACCGCGGGGG...CCCTAGGAGCCCTGTAACTCCCAGGAGAGACCACTGAAAATACTGGAGCAACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR GCA 90 bp CCTCCCGCCATGGCAGCTCGTGTCATCAGTCCTCCTCTACCTGCTGAGATGAAACCCAGATGCGGTAAGTaGGTTGGCGGAACACTCGCA +
Preference number: 4 (lower is better)
Translates to: PPAMAARVISPPLPAEMKPRCGK*VGGTLA
Trigger: TGCGAGTGTTCCGCCAACGCACTTACCGCATCTGGG...TTTCATCTCAGCAGGTAGAGGAGGACTGATGACACGAGCTGCCATGGCGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp GGAGTGGACTGGGACAAGGTGAGGCTGATTGGCCCAAGTTCCGGGTCCCTCCTTCAGGATGACGAGGGATaGCTGAAAGGCGAAGGAACA +
Preference number: 4 (lower is better)
Translates to: GVDWDKVRLIGPSSGSLLQDDEG*LKGEGT
Trigger: TGTTCCTTCGCCTTTCAGCCATCCCTCGTCATCCTG...AAGGAGGGACCCGGAACTTGGGCCAATCAGCCTCACCTTGTCCCAGTCCACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp AGGCCAGGGGTGGTTCCCAAGCTTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGAAGGAGATTGTCAGGTaGCTGAAATGCTGTGTGCGC +
Preference number: 4 (lower is better)
Translates to: RPGVVPKLSQILGGERPWKEIVR*LKCCVR
Trigger: GCGCACACAGCATTTCAGCCACCTGACAATCTCCTT...CCAGGGCCTTTCTCCTCCCAGGATCTGGGAAAGCTTGGGAACCACCCCTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp CAGTGGGTTTTCCTTTGGGGAGTTGATAAGAGCTGGACTGGGACCAGCGGAGGGTGCCCCTCCACCCAGTaGCTCCCAAATATGGATGGC +
Preference number: 4 (lower is better)
Translates to: QWVFLWGVDKSWTGTSGGCPSTQ*LPNMDG
Trigger: GCCATCCATATTTGGGAGCCACTGGGTGGAGGGGCA...CCCTCCGCTGGTCCCAGTCCAGCTCTTATCAACTCCCCAAAGGAAAACCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp TGCATTGGGCCCACCAGCTCAAATGCAATGGGGGCCATGATGGTGATGAAGAAGAGCCGTTGCACCAGGTaGCAGCGAACACCACCACCC +
Preference number: 4 (lower is better)
Translates to: CIGPTSSNAMGAMMVMKKSRCTR*QRTPPP
Trigger: GGGTGGTGGTGTTCGCTGCCACCTGGTGCAACGGCT...CTTCTTCATCACCATCATGGCCCCCATTGCATTTGAGCTGGTGGGCCCAATGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636771.1
CDS-3UTR CCA 90 bp GGGTGGTTCCCAAGCTTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGAAAATTTACAACCTCATCCTCCTaGCCCGGGGATGACCCTGCC +
Preference number: 4 (lower is better)
Translates to: GWFPSFPRSWEEKGPGKFTTSSS*PGDDPA
Trigger: GGCAGGGTCATCCCCGGGCCAGGAGGATGAGGTTGT...AAATTTTCCAGGGCCTTTCTCCTCCCAGGATCTGGGAAAGCTTGGGAACCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR CAA 72 bp GCAAAGTGGCCTAGGATGCCCAGCATGGGAGACACATaGGGTGGTAAAGGCTGGGATGGCTTCCCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: AKWPRMPSMGDT*GGKGWDGFPFP
Trigger: TGGGAAGGGGAAGCCATCCCAGCCTTTACCACCCAATGTGTCTCCCATGCTGGGCATCCTAGGCCACTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR CAA 72 bp GAGCTGGACTGGGACCAGCGGAGGGGGCTCAGGACTTaGGCCTTGAATGAAATCATTGGAGGCCAACCATGC +
Preference number: 4 (lower is better)
Translates to: ELDWDQRRGLRT*ALNEIIGGQPC
Trigger: GCATGGTTGGCCTCCAATGATTTCATTCAAGGCCAAAGTCCTGAGCCCCCTCCGCTGGTCCCAGTCCAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp TTTTCAGTGGTCTCTCCTGGGAGTTACAGGGCTCCTAGGGCCCAGATTCTCCTGAGTAGTGGCCCAGGATaGCGAGGGATGGCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: FSVVSPGSYRAPRAQILLSSGPG*RGMAER
Trigger: CCTTTCAGCCATCCCTCGTCATCCTGGGCCACTACT...CAGGAGAATCTGGGCCCTAGGAGCCCTGTAACTCCCAGGAGAGACCACTGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp AGGCCAGGGGTGGTTCCCAAGCTTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGGGTCTCCTTGATTTCTaGGAACTCCTCCTCCACATA +
Preference number: 4 (lower is better)
Translates to: RPGVVPKLSQILGGERPWGLLDF*ELLLHI
Trigger: TATGTGGAGGAGGAGTTCTCAGAAATCAAGGAGACC...CCAGGGCCTTTCTCCTCCCAGGATCTGGGAAAGCTTGGGAACCACCCCTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp GCCATGGCAGCTCGTGTCATCAGTCCTCCTCTACCTGCTGAGATGAAAGGAGTTGTCACTGATGTGGCCTaGCACAAGACGCCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: AMAARVISPPLPAEMKGVVTDVA*HKTPKA
Trigger: GGCCTTGGGCGTCTTGTGTCAGGCCACATCAGTGAC...AACTCCTTTCATCTCAGCAGGTAGAGGAGGACTGATGACACGAGCTGCCATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp GACAAGGTGAGGCTGATTGGCCCAAGTTCCGGGTCCCTCCTTTCTTCAAGCACCCAGGGATGGAGTCACTaGTGTGGCCTGACACAAGAC +
Preference number: 4 (lower is better)
Translates to: DKVRLIGPSSGSLLSSSTQGWSH*CGLTQD
Trigger: GTCTTGTGTCAGGCCACATCAGTGACTCCATCCCTG...GGTGCTTGAAGAAAGGAGGGACCCGGAACTTGGGCCAATCAGCCTCACCTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp GATTGGCCCAAGTTCCGGGTCCCTCCTTTCTTCAAGCACCCATGTGTCTATGACTGGTATGGAGGCCAATaGAAGCAACGGCAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: DWPKFRVPPFFKHPCVYDWYGGQ*KQRQPP
Trigger: CGGGGGCTGCCGTTGCTTTCATTGGCCTCCATACCA...GTCATAGACACATGGGTGCTTGAAGAAAGGAGGGACCCGGAACTTGGGCCAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp TCTTCACATTTTGCCATGTGTATACAAGAATGGGGTGCTGGGAGGGCCTTGAGGCTCCTGGCCCGGGGATaGCCCTGCCTTAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: SSHFAMCIQEWGAGRALRLLARG*PCLKVA
Trigger: TGCCACCTTAAGGCAGGGTCATCCCCGGGCCAGGAG...CCTCAAGGCCCTCCCAGCACCCCATTCTTGTATACACATGGCAAAATGTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp TGCTGTGTGCGCAGGTCTGGGAACAAGTGTGCTGGTGGCAAAAATGTAAATGCTCTCCTGGCCCGGGGATaGCCCTGCCTTAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: CCVRRSGNKCAGGKNVNALLARG*PCLKVA
Trigger: TGCCACCTTAAGGCAGGGTCATCCCCGGGCCAGGAG...AGCATTTACATTTTTGCCACCAGCACACTTGTTCCCAGACCTGCGCACACAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR GCA 90 bp AGCCAGAAAGCGCTGGTGCAGGGTGCGGACACCTCTCTTGCTTGGGGTGTCCTGAGGACATGGAGAAAATaGTACTCCCAGCAGACACCA +
Preference number: 4 (lower is better)
Translates to: SQKALVQGADTSLAWGVLRTWRK*YSQQTP
Trigger: TGGTGTCTGCTGGGAGTAGCATTTTCTCCATGTCCT...CAGGACACCCCAAGCAAGAGAGGTGTCCGCACCCTGCACCAGCGCTTTCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636771.1
CDS-3UTR GCA 90 bp AGGTCTGGGAACAAGTGTGCTGGTGGCAAAAATGTAAATGCTGAGCAGGGTGGGGCCAGAAAGCGCTGGTaGAGGGTGCGGACACCTCTC +
Preference number: 4 (lower is better)
Translates to: RSGNKCAGGKNVNAEQGGARKRW*RVRTPL
Trigger: GAGAGGTGTCCGCACCCTGCACCAGCGCTTTCTGGC...CCCACCCTGCTCAGCATTTACATTTTTGCCACCAGCACACTTGTTCCCAGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR GCA 90 bp TTTTGCCATGTGTATACAAGAATGGGGTGCTGGGAGGGCCTTGAGGTTAATGCCCTGCCAGGGCCCCTTTaGTTCCTCGCTCGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: FCHVYTRMGCWEGLEVNALPGPL*FLARLA
Trigger: AGCCAGGCGAGCGAGGAAGCAAAGGGGCCCTGGCAG...GGCATTAACCTCAAGGCCCTCCCAGCACCCCATTCTTGTATACACATGGCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587091.6
CDS-3UTR GCA 90 bp CCCTCTAAGCAAAGTGGCCTAGGATGCCCAGCATGGGAGACACATTGGGTGGTACGAAGATGGAGCCGTTaGACCAGGTGGCAGCGAACA +
Preference number: 4 (lower is better)
Translates to: PSKQSGLGCPAWETHWVVRRWSR*TRWQRT
Trigger: TGTTCGCTGCCACCTGGTGCAACGGCTCCATCTTCG...TACCACCCAATGTGTCTCCCATGCTGGGCATCCTAGGCCACTTTGCTTAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp AAGGGCAGCAGCAGCAATTCCGAAGGCCCAGATGCGGTAAGTGCGTTGGCGGAACAGGATGACGAGGGATaGCTGAAAGGCGAAGGAACA +
Preference number: 4 (lower is better)
Translates to: KGSSSNSEGPDAVSALAEQDDEG*LKGEGT
Trigger: TGTTCCTTCGCCTTTCAGCCATCCCTCGTCATCCTG...TTCCGCCAACGCACTTACCGCATCTGGGCCTTCGGAATTGCTGCTGCTGCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636771.1
CDS-3UTR CCA 90 bp GGAGTGGACTGGGACAAGGTGAGGCTGATTGGCCCAAGTTCCGGGTCCCTCCTTGGAAGGGGAAGGACATaGAGAAAATGCTACTCCCAG +
Preference number: 4 (lower is better)
Translates to: GVDWDKVRLIGPSSGSLLGRGRT*RKCYSQ
Trigger: CTGGGAGTAGCATTTTCTCCATGTCCTTCCCCTTCC...AAGGAGGGACCCGGAACTTGGGCCAATCAGCCTCACCTTGTCCCAGTCCACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp TGCTGTGTGCGCAGGTCTGGGAACAAGTGTGCTGGTGGCAAAAATGTAAATGCTTTGCTTGGGGTGTCCTaGGAGCTGGGCAGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: CCVRRSGNKCAGGKNVNALLGVS*ELGRRG
Trigger: GCCCCTCCTGCCCAGCTCCCAGGACACCCCAAGCAA...AGCATTTACATTTTTGCCACCAGCACACTTGTTCCCAGACCTGCGCACACAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp CAGTGGGTTTTCCTTTGGGGAGTTGATAAGAGCTGGACTGGGACCAGCGGAGGGAGCTTTCCCAGATCCTaGGAGGAGAAAGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: QWVFLWGVDKSWTGTSGGSFPRS*EEKGPG
Trigger: TCCAGGGCCTTTCTCCTCCCAGGATCTGGGAAAGCT...CCCTCCGCTGGTCCCAGTCCAGCTCTTATCAACTCCCCAAAGGAAAACCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp GTTTGGAACACCTGGAGCTTTGACTCCAAGGAGATTGTCAGGTGGCTGAAATGCGCTTCCTCGCTCGCCTaGCTTTGCAGCGCCATCGCG +
Preference number: 4 (lower is better)
Translates to: VWNTWSFDSKEIVRWLKCASSLA*LCSAIA
Trigger: CGCGATGGCGCTGCAAAGCCAGGCGAGCGAGGAAGC...GCATTTCAGCCACCTGACAATCTCCTTGGAGTCAAAGCTCCAGGTGTTCCAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587091.6
CDS-3UTR TCA 90 bp CCCCAGAGCTTAGAAAGTATATGGAGAGGTTCCAAAGGCCAGGGGTGGTTCCCAGTGAGCTGTGCTAACTaGACACAGCCTGGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: PQSLESIWRGSKGQGWFPVSCAN*TQPGSA
Trigger: GGCACTGCCAGGCTGTGTTCAGTTAGCACAGCTCAC...TGGGAACCACCCCTGGCCTTTGGAACCTCTCCATATACTTTCTAAGCTCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR GCA 90 bp TCTTCACATTTTGCCATGTGTATACAAGAATGGGGTGCTGGGAGGGCCTTGAGGGCCAGAAAGCGCTGGTaGAGGGTGCGGACACCTCTC +
Preference number: 4 (lower is better)
Translates to: SSHFAMCIQEWGAGRALRARKRW*RVRTPL
Trigger: GAGAGGTGTCCGCACCCTGCACCAGCGCTTTCTGGC...CCTCAAGGCCCTCCCAGCACCCCATTCTTGTATACACATGGCAAAATGTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR GCA 90 bp ATGGCAGCTCGTGTCATCAGTCCTCCTCTACCTGCTGAGATGAAAGGAGTTTCTCTGCTGTTCCTGGTCTaGCTCCTGCCAGGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: MAARVISPPLPAEMKGVSLLFLV*LLPGPL
Trigger: AAGGGGCCCTGGCAGGAGGCAGACCAGGAACAGCAG...AGAAACTCCTTTCATCTCAGCAGGTAGAGGAGGACTGATGACACGAGCTGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587091.6
CDS-3UTR GCA 90 bp TTCCAAAGGCCAGGGGTGGTTCCCAAGCTTTCCCAGATCCTGGGAGGAGAAAGGAGTCCCCAAAACAGTTaGGGAGTAGGCCTGCAATGG +
Preference number: 4 (lower is better)
Translates to: FQRPGVVPKLSQILGGERSPQNS*GVGLQW
Trigger: CCATTGCAGGCCTACTCCGCAACTGTTTTGGGGACT...CCTTTCTCCTCCCAGGATCTGGGAAAGCTTGGGAACCACCCCTGGCCTTTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR GCA 90 bp GACAAGGTGAGGCTGATTGGCCCAAGTTCCGGGTCCCTCCTTTCTTCAAGCACCATTGGAGGCCAACCATaGCCCAGCTGCCTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: DKVRLIGPSSGSLLSSSTIGGQP*PSCLFV
Trigger: TACAAACAGGCAGCTGGGGCATGGTTGGCCTCCAAT...GGTGCTTGAAGAAAGGAGGGACCCGGAACTTGGGCCAATCAGCCTCACCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR GCA 90 bp GGAGTGGACTGGGACAAGGTGAGGCTGATTGGCCCAAGTTCCGGGTCCCTCCTTAGAGAAGTGGGCGACTaGCTGATTCTTAAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: GVDWDKVRLIGPSSGSLLREVGD*LILKSH
Trigger: ATGGCTCTTAAGAATCAGGCAGTCGCCCACTTCTCT...AAGGAGGGACCCGGAACTTGGGCCAATCAGCCTCACCTTGTCCCAGTCCACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR GCA 90 bp AGGCCAGGGGTGGTTCCCAAGCTTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGACACAAGCTCACATGTaGACAACCACATGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: RPGVVPKLSQILGGERPWTQAHM*TTTCVE
Trigger: TTCCACACATGTGGTTGTGCACATGTGAGCTTGTGT...CCAGGGCCTTTCTCCTCCCAGGATCTGGGAAAGCTTGGGAACCACCCCTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp GGGAAAGGGCACACAATGGCAAGAAAGGCATTAGATTGGTTCCTCAGGGTTGGGCAGACACCACACCATTaGCCAGACCCAGGCGGCGTT +
Preference number: 4 (lower is better)
Translates to: GKGHTMARKALDWFLRVGQTPHH*PDPGGV
Trigger: AACGCCGCCTGGGTCTGGCCAATGGTGTGGTGTCTG...CCCAACCCTGAGGAACCAATCTAATGCCTTTCTTGCCATTGTGTGCCCTTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp GGGCTCAGGACTTTGGCCTTGAATGAAATCATTGGAGGCCAACCATGCCCCAGCTCCAAAGGCCAGGGGTaGTTCCCAAGCTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: GLRTLALNEIIGGQPCPSSKGQG*FPSFPR
Trigger: TCTGGGAAAGCTTGGGAACCACCCCTGGCCTTTGGA...GCTGGGGCATGGTTGGCCTCCAATGATTTCATTCAAGGCCAAAGTCCTGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp CACTGCTTGTACCCAGTTCTTGGGAAGCCACAGTCATCAGCAACTCTAAGACTACTCAGACTCCGGCTCTaGGCTACCCACCGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: HCLYPVLGKPQSSATLRLLRLRL*ATHRLL
Trigger: CAGGAGCCGGTGGGTAGCCCAGAGCCGGAGTCTGAG...TAGTCTTAGAGTTGCTGATGACTGTGGCTTCCCAAGAACTGGGTACAAGCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587091.6
CDS-3UTR CCA 90 bp CCTCCCGCCATGGCAGCTCGTGTCATCAGTCCTCCTCTACCTGCTGAGATGAAAGCATGGGAGACACATTaGGTGGTAAAGGCTGGGATG +
Preference number: 4 (lower is better)
Translates to: PPAMAARVISPPLPAEMKAWETH*VVKAGM
Trigger: CATCCCAGCCTTTACCACCCAATGTGTCTCCCATGC...TTTCATCTCAGCAGGTAGAGGAGGACTGATGACACGAGCTGCCATGGCGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR CAA 72 bp TGGGAAAGGGCACACAATGGCAAGAAAGGCATTAGATaGGTTCCTCAGGGTTGGGGGAGCCCGGCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: WERAHNGKKGIR*VPQGWGSPAVA
Trigger: AGCTACTGCCGGGCTCCCCCAACCCTGAGGAACCAATCTAATGCCTTTCTTGCCATTGTGTGCCCTTTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp ATCCTCCTCCTCCCCCAGAGCTTAGAAAGTATATGGAGAGGTTCCAAAGGCCAGAGTAGTGGCCCAGGATaGCGAGGGATGGCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: ILLLPQSLESIWRGSKGQSSGPG*RGMAER
Trigger: CCTTTCAGCCATCCCTCGTCATCCTGGGCCACTACT...CTGGCCTTTGGAACCTCTCCATATACTTTCTAAGCTCTGGGGGAGGAGGAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp CTGATTGGCCCAAGTTCCGGGTCCCTCCTTTCTTCAAGCACCCATGTGTCTATGAAGTACTTCCTGAGCTaGGCCAGAAAGCGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LIGPSSGSLLSSSTHVSMKYFLS*ARKRWC
Trigger: GCACCAGCGCTTTCTGGCTCAGCTCAGGAAGTACTT...CATAGACACATGGGTGCTTGAAGAAAGGAGGGACCCGGAACTTGGGCCAATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp TTGTTGCTCCAGTATTTTCAGTGGTCTCTCCTGGGAGTTACAGGGCTCCTAGGGAAGACGCCCAAGGCCTaGGGTAGCCCCAATACACAC +
Preference number: 4 (lower is better)
Translates to: LLLQYFQWSLLGVTGLLGKTPKA*GSPNTH
Trigger: GTGTGTATTGGGGCTACCTCAGGCCTTGGGCGTCTT...CCCTAGGAGCCCTGTAACTCCCAGGAGAGACCACTGAAAATACTGGAGCAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp GGAGACACATTGGGTGGTAAAGGCTGGGATGGCTTCCCCTTCCCAAAAGAAATTGTCACTGATGTGGCCTaGCACAAGACGCCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: GDTLGGKGWDGFPFPKEIVTDVA*HKTPKA
Trigger: GGCCTTGGGCGTCTTGTGTCAGGCCACATCAGTGAC...AATTTCTTTTGGGAAGGGGAAGCCATCCCAGCCTTTACCACCCAATGTGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp CCCTCTAAGCAAAGTGGCCTAGGATGCCCAGCATGGGAGACACATTGGGTGGTAAGATTGTCAGGTGGCTaGAATGCTGTGTGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: PSKQSGLGCPAWETHWVVRLSGG*NAVCAG
Trigger: ACCTGCGCACACAGCATTTCAGCCACCTGACAATCT...TACCACCCAATGTGTCTCCCATGCTGGGCATCCTAGGCCACTTTGCTTAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp TTCCAAAGGCCAGGGGTGGTTCCCAAGCTTTCCCAGATCCTGGGAGGAGAAAGGGAACACCTGGAGCTTTaGCTCCAAGGAGATTGTCAG +
Preference number: 4 (lower is better)
Translates to: FQRPGVVPKLSQILGGEREHLEL*LQGDCQ
Trigger: CTGACAATCTCCTTGGAGTCAAAGCTCCAGGTGTTC...CCTTTCTCCTCCCAGGATCTGGGAAAGCTTGGGAACCACCCCTGGCCTTTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp ATAAGGGCACTGCTTGTACCCAGTTCTTGGGAAGCCACAGTCATCAGCAACTCTGGCTTAGGGAGCTGGTaGAGGAGCTGGTATGGAGGC +
Preference number: 4 (lower is better)
Translates to: IRALLVPSSWEATVISNSGLGSW*RSWYGG
Trigger: GCCTCCATACCAGCTCCTTCACCAGCTCCCTAAGCC...AGAGTTGCTGATGACTGTGGCTTCCCAAGAACTGGGTACAAGCAGTGCCCTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp GGCATTGTTGCTCCAGTATTTTCAGTGGTCTCTCCTGGGAGTTACAGGGCTCCTACTGTTGGCTCCAAGTaGCAGCCAGGAATGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GIVAPVFSVVSPGSYRAPTVGSK*QPGMPG
Trigger: GCCAGGCATTCCTGGCTGTCACTTGGAGCCAACAGT...AGGAGCCCTGTAACTCCCAGGAGAGACCACTGAAAATACTGGAGCAACAATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp ATCCTCCTCCTCCCCCAGAGCTTAGAAAGTATATGGAGAGGTTCCAAAGGCCAGACTGTTGGCTCCAAGTaGCAGCCAGGAATGCCTGGC +
Preference number: 4 (lower is better)
Translates to: ILLLPQSLESIWRGSKGQTVGSK*QPGMPG
Trigger: GCCAGGCATTCCTGGCTGTCACTTGGAGCCAACAGT...CTGGCCTTTGGAACCTCTCCATATACTTTCTAAGCTCTGGGGGAGGAGGAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp GGGCTCAGGACTTTGGCCTTGAATGAAATCATTGGAGGCCAACCATGCCCCAGCAAGTGGGCGACTGCCTaGTTCTTAAGAGCCATCTGC +
Preference number: 4 (lower is better)
Translates to: GLRTLALNEIIGGQPCPSKWATA*FLRAIC
Trigger: GCAGATGGCTCTTAAGAATCAGGCAGTCGCCCACTT...GCTGGGGCATGGTTGGCCTCCAATGATTTCATTCAAGGCCAAAGTCCTGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp GGCCAGGGGTGGTTCCCAAGCTTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGAATATTATGTGACATCTaGATGGGCAGATTTGGGACC +
Preference number: 4 (lower is better)
Translates to: GQGWFPSFPRSWEEKGPGILCDI*MGRFGT
Trigger: GGTCCCAAATCTGCCCATTCAGATGTCACATAATAT...TCCAGGGCCTTTCTCCTCCCAGGATCTGGGAAAGCTTGGGAACCACCCCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR GCA 90 bp CCCAGTTCTTGGGAAGCCACAGTCATCAGCAACTCTAAGACTAACCAAGGCTACTGCGGACACCTCTCTTaGTTGGGGTGTCCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: PSSWEATVISNSKTNQGYCGHLS*LGCPGS
Trigger: GCTCCCAGGACACCCCAAGCAAGAGAGGTGTCCGCA...GTAGCCTTGGTTAGTCTTAGAGTTGCTGATGACTGTGGCTTCCCAAGAACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR GCA 90 bp TTGTTGCTCCAGTATTTTCAGTGGTCTCTCCTGGGAGTTACAGGGCTCCTAGGGCCCAGATGCGGTAAGTaGGTTGGCGGAACACTCGCA +
Preference number: 4 (lower is better)
Translates to: LLLQYFQWSLLGVTGLLGPRCGK*VGGTLA
Trigger: TGCGAGTGTTCCGCCAACGCACTTACCGCATCTGGG...CCCTAGGAGCCCTGTAACTCCCAGGAGAGACCACTGAAAATACTGGAGCAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR GCA 90 bp CCCCAGAGCTTAGAAAGTATATGGAGAGGTTCCAAAGGCCAGGGGTGGTTCCCAGCTGGTACTTGTTTCTaGTGCTGCAGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PQSLESIWRGSKGQGWFPAGTCF*CCSCCC
Trigger: GCAGCAGCAGCTGCAGCAGCAGAAACAAGTACCAGC...TGGGAACCACCCCTGGCCTTTGGAACCTCTCCATATACTTTCTAAGCTCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587091.6
CDS-3UTR GCA 90 bp CAGTCATCAGCAACTCTAAGACTAACCAAGGCTACTTGTCTCATTTTGCCTCCCGGCAGCCCCCGCGGTTaGTGTGATTCGGCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: QSSATLRLTKATCLILPPGSPRG*CDSAAQ
Trigger: TTGGGCTGCCGAATCACAGCAACCGCGGGGGCTGCC...GGGAGGCAAAATGAGACAAGTAGCCTTGGTTAGTCTTAGAGTTGCTGATGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR GCA 90 bp CTGATTGGCCCAAGTTCCGGGTCCCTCCTTTCTTCAAGCACCCATGTGTCTATGGCCCACCAGCTCAAATaGAATGGGGGCCATGATGGT +
Preference number: 4 (lower is better)
Translates to: LIGPSSGSLLSSSTHVSMAHQLK*NGGHDG
Trigger: ACCATCATGGCCCCCATTGCATTTGAGCTGGTGGGC...CATAGACACATGGGTGCTTGAAGAAAGGAGGGACCCGGAACTTGGGCCAATCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp GACAAGGTGAGGCTGATTGGCCCAAGTTCCGGGTCCCTCCTTTCTTCAAGCACCGGAAGGGGAAGGACATaGAGAAAATGCTACTCCCAG +
Preference number: 4 (lower is better)
Translates to: DKVRLIGPSSGSLLSSSTGRGRT*RKCYSQ
Trigger: CTGGGAGTAGCATTTTCTCCATGTCCTTCCCCTTCC...GGTGCTTGAAGAAAGGAGGGACCCGGAACTTGGGCCAATCAGCCTCACCTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp GTTTGGAACACCTGGAGCTTTGACTCCAAGGAGATTGTCAGGTGGCTGAAATGCTTGGTTCCTCAGGGTTaGGGGAGCCCGGCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: VWNTWSFDSKEIVRWLKCLVPQG*GSPAVA
Trigger: AGCTACTGCCGGGCTCCCCCAACCCTGAGGAACCAA...GCATTTCAGCCACCTGACAATCTCCTTGGAGTCAAAGCTCCAGGTGTTCCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp CCCTCTAAGCAAAGTGGCCTAGGATGCCCAGCATGGGAGACACATTGGGTGGTAATGAAGGGGAAGAGCTaGGAAAGGGCACACAATGGC +
Preference number: 4 (lower is better)
Translates to: PSKQSGLGCPAWETHWVVMKGKS*ERAHNG
Trigger: GCCATTGTGTGCCCTTTCCCAGCTCTTCCCCTTCAT...TACCACCCAATGTGTCTCCCATGCTGGGCATCCTAGGCCACTTTGCTTAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp TTGTTGCTCCAGTATTTTCAGTGGTCTCTCCTGGGAGTTACAGGGCTCCTAGGGCTGTGTGCGCAGGTCTaGGAACAAGTGTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LLLQYFQWSLLGVTGLLGLCAQV*EQVCWW
Trigger: CCACCAGCACACTTGTTCCCAGACCTGCGCACACAG...CCCTAGGAGCCCTGTAACTCCCAGGAGAGACCACTGAAAATACTGGAGCAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp GGGAAAGGGCACACAATGGCAAGAAAGGCATTAGATTGGTTCCTCAGGGTTGGGCTGTGTGCGCAGGTCTaGGAACAAGTGTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GKGHTMARKALDWFLRVGLCAQV*EQVCWW
Trigger: CCACCAGCACACTTGTTCCCAGACCTGCGCACACAG...CCCAACCCTGAGGAACCAATCTAATGCCTTTCTTGCCATTGTGTGCCCTTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp TCCGGGTCCCTCCTTTCTTCAAGCACCCATGTGTCTATGACAGTCATACAAAGACCCCTCCTCCCGCCATaGCAGCTCGTGTCATCAGTC +
Preference number: 4 (lower is better)
Translates to: SGSLLSSSTHVSMTVIQRPLLPP*QLVSSV
Trigger: GACTGATGACACGAGCTGCCATGGCGGGAGGAGGGG...TCTTTGTATGACTGTCATAGACACATGGGTGCTTGAAGAAAGGAGGGACCCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp GAGAATTTAGTTAATGAGTTTGGAACACCTGGAGCTTTGACTCCAAGGAGATTGCCACCTTCGGGAGGCTaGAAGCCGCGCGCGGTGCCG +
Preference number: 4 (lower is better)
Translates to: ENLVNEFGTPGALTPRRLPPSGG*KPRAVP
Trigger: CGGCACCGCGCGCGGCTTCCAGCCTCCCGAAGGTGG...CAATCTCCTTGGAGTCAAAGCTCCAGGTGTTCCAAACTCATTAACTAAATTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR CAA 72 bp AGCAGCAATTCCGAAGGCCCAGATGCGGTAAGTGCGTaGGCGGAACACTCGCATGTTGAAGTACTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: SSNSEGPDAVSA*AEHSHVEVLPE
Trigger: CTCAGGAAGTACTTCAACATGCGAGTGTTCCGCCAACGCACTTACCGCATCTGGGCCTTCGGAATTGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636771.1
CDS-3UTR TCA 90 bp AATGACCTCCTCAGCAAACAGAGATTTGGGCCTACCCTATTAGGCTCCTGGGGAAGAGAATCCCGTAGGTaGAGTAGCGCAGGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: NDLLSKQRFGPTLLGSWGRESRR*SSAGLG
Trigger: CCCTAAGCCTGCGCTACTTCACCTACGGGATTCTCT...TCCCCAGGAGCCTAATAGGGTAGGCCCAAATCTCTGTTTGCTGAGGAGGTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp GGGAAAGGGCACACAATGGCAAGAAAGGCATTAGATTGGTTCCTCAGGGTTGGGATGACGAGGGATGGCTaGAAGGCGAAGGAACAGCCA +
Preference number: 4 (lower is better)
Translates to: GKGHTMARKALDWFLRVGMTRDG*KAKEQP
Trigger: TGGCTGTTCCTTCGCCTTTCAGCCATCCCTCGTCAT...CCCAACCCTGAGGAACCAATCTAATGCCTTTCTTGCCATTGTGTGCCCTTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp CCCCAGAGCTTAGAAAGTATATGGAGAGGTTCCAAAGGCCAGGGGTGGTTCCCAGCACCCAGGTCTCCTTaGTTTCTGAGAACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PQSLESIWRGSKGQGWFPAPRSP*FLRTPP
Trigger: AGGAGGAGTTCTCAGAAATCAAGGAGACCTGGGTGC...TGGGAACCACCCCTGGCCTTTGGAACCTCTCCATATACTTTCTAAGCTCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp GTTTGGAACACCTGGAGCTTTGACTCCAAGGAGATTGTCAGGTGGCTGAAATGCAAGACGCCCAAGGCCTaGGGTAGCCCCAATACACAC +
Preference number: 4 (lower is better)
Translates to: VWNTWSFDSKEIVRWLKCKTPKA*GSPNTH
Trigger: GTGTGTATTGGGGCTACCTCAGGCCTTGGGCGTCTT...GCATTTCAGCCACCTGACAATCTCCTTGGAGTCAAAGCTCCAGGTGTTCCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp CAGTGGGTTTTCCTTTGGGGAGTTGATAAGAGCTGGACTGGGACCAGCGGAGGGAGCCCAAACGGTCAGTaGATATACTCACAATGGGAG +
Preference number: 4 (lower is better)
Translates to: QWVFLWGVDKSWTGTSGGSPNGQ*IYSQWE
Trigger: CTCCCATTGTGAGTATATTCACTGACCGTTTGGGCT...CCCTCCGCTGGTCCCAGTCCAGCTCTTATCAACTCCCCAAAGGAAAACCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp GAATGGGGTGCTGGGAGGGCCTTGAGGTTAATGCCTTGGACTGTAAGATTTGTAGTGAGCTGTGCTAACTaGACACAGCCTGGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: EWGAGRALRLMPWTVRFVVSCAN*TQPGSA
Trigger: GGCACTGCCAGGCTGTGTTCAGTTAGCACAGCTCAC...TACAAATCTTACAGTCCAAGGCATTAACCTCAAGGCCCTCCCAGCACCCCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp TCTTCACATTTTGCCATGTGTATACAAGAATGGGGTGCTGGGAGGGCCTTGAGGCACAAAGAGGCAGAGTaGGGAGAGAGGCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SSHFAMCIQEWGAGRALRHKEAE*GERLSS
Trigger: GGAGCTCAGCCTCTCTCCTCACTCTGCCTCTTTGTG...CCTCAAGGCCCTCCCAGCACCCCATTCTTGTATACACATGGCAAAATGTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp GGCCAGGGGTGGTTCCCAAGCTTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGACCATGTCTTGAGCTCTaGAATTTTGTTCGTTCTAGA +
Preference number: 4 (lower is better)
Translates to: GQGWFPSFPRSWEEKGPGPCLEL*NFVRSR
Trigger: TCTAGAACGAACAAAATTTCAGAGCTCAAGACATGG...TCCAGGGCCTTTCTCCTCCCAGGATCTGGGAAAGCTTGGGAACCACCCCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR GCA 90 bp CAACCATACAATAAGGGCACTGCTTGTACCCAGTTCTTGGGAAGCCACAGTCATAGCGCTGGTGCAGGGTaGGGACACCTCTCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: QPYNKGTACTQFLGSHSHSAGAG*GHLSCL
Trigger: CAAGCAAGAGAGGTGTCCGCACCCTGCACCAGCGCT...ATGACTGTGGCTTCCCAAGAACTGGGTACAAGCAGTGCCCTTATTGTATGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR GCA 90 bp GTCACCTACTTCAGAGGGATCAAAGTGGTTCAGAGTCTACCTTTCATGGCACCTAGCGCTGGTGCAGGGTaGGGACACCTCTCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: VTYFRGIKVVQSLPFMAPSAGAG*GHLSCL
Trigger: CAAGCAAGAGAGGTGTCCGCACCCTGCACCAGCGCT...AGGTGCCATGAAAGGTAGACTCTGAACCACTTTGATCCCTCTGAAGTAGGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR GCA 90 bp GTTTGGAACACCTGGAGCTTTGACTCCAAGGAGATTGTCAGGTGGCTGAAATGCCCCAGATGCGGTAAGTaGGTTGGCGGAACACTCGCA +
Preference number: 4 (lower is better)
Translates to: VWNTWSFDSKEIVRWLKCPRCGK*VGGTLA
Trigger: TGCGAGTGTTCCGCCAACGCACTTACCGCATCTGGG...GCATTTCAGCCACCTGACAATCTCCTTGGAGTCAAAGCTCCAGGTGTTCCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR GCA 90 bp TGCTGTGTGCGCAGGTCTGGGAACAAGTGTGCTGGTGGCAAAAATGTAAATGCTGTCAGGTGGCTGAAATaGTGTGTGCGCAGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: CCVRRSGNKCAGGKNVNAVRWLK*CVRRSG
Trigger: CCCAGACCTGCGCACACAGCATTTCAGCCACCTGAC...AGCATTTACATTTTTGCCACCAGCACACTTGTTCCCAGACCTGCGCACACAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR GCA 90 bp AAAGGGCACACAATGGCAAGAAAGGCATTAGATTGGTTCCTCAGGGTTGGGGGAGTCAGGTGGCTGAAATaGTGTGTGCGCAGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: KGHTMARKALDWFLRVGGVRWLK*CVRRSG
Trigger: CCCAGACCTGCGCACACAGCATTTCAGCCACCTGAC...TCCCCCAACCCTGAGGAACCAATCTAATGCCTTTCTTGCCATTGTGTGCCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590447.1
ENST00000636771.1
CDS-3UTR GCA 90 bp GGGAAAGGGCACACAATGGCAAGAAAGGCATTAGATTGGTTCCTCAGGGTTGGGGCCCACCAGCTCAAATaGAATGGGGGCCATGATGGT +
Preference number: 4 (lower is better)
Translates to: GKGHTMARKALDWFLRVGAHQLK*NGGHDG
Trigger: ACCATCATGGCCCCCATTGCATTTGAGCTGGTGGGC...CCCAACCCTGAGGAACCAATCTAATGCCTTTCTTGCCATTGTGTGCCCTTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636771.1
CDS-3UTR GCA 90 bp TCAGCAACTCTAAGACTAACCAAGGCTACTTGTCTCATTTTGCCTCCCTGCCCCTTGGCAGGGCCATCATaGCCAGGAGGTAGCCAATGG +
Preference number: 4 (lower is better)
Translates to: SATLRLTKATCLILPPCPLAGPS*PGGSQW
Trigger: CCATTGGCTACCTCCTGGGCATGATGGCCCTGCCAA...GGGGCAGGGAGGCAAAATGAGACAAGTAGCCTTGGTTAGTCTTAGAGTTGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR GCA 90 bp CTGATTGGCCCAAGTTCCGGGTCCCTCCTTTCTTCAAGCACCCATGTGTCTATGCAAAGTGGCCTAGGATaGCCAGCATGGGAGACACAT +
Preference number: 4 (lower is better)
Translates to: LIGPSSGSLLSSSTHVSMQSGLG*PAWETH
Trigger: ATGTGTCTCCCATGCTGGGCATCCTAGGCCACTTTG...CATAGACACATGGGTGCTTGAAGAAAGGAGGGACCCGGAACTTGGGCCAATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR GCA 90 bp GCCACAGTCATCAGCAACTCTAAGACTAACCAAGGCTACTTGTCTCATTTTGCCAACACAGCCTGGCAGTaGCCTCTGCCCCTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: ATVISNSKTNQGYLSHFANTAWQ*PLPLAR
Trigger: CCTGGCTAGGGGCAGAGGGCACTGCCAGGCTGTGTT...GGCAAAATGAGACAAGTAGCCTTGGTTAGTCTTAGAGTTGCTGATGACTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp TTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGAAAATTTAAAAGCATTCTGGGGCAGACACCACACCATTaGCCAGACCCAGGCGGCGTT +
Preference number: 4 (lower is better)
Translates to: FPRSWEEKGPGKFKSILGQTPHH*PDPGGV
Trigger: AACGCCGCCTGGGTCTGGCCAATGGTGTGGTGTCTG...CCCCAGAATGCTTTTAAATTTTCCAGGGCCTTTCTCCTCCCAGGATCTGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp TTCCGGGTCCCTCCTTTCTTCAAGCACCCATGTGTCTATGACAGTCATACAAAGTTGGTTCCTCAGGGTTaGGGGAGCCCGGCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: FRVPPFFKHPCVYDSHTKLVPQG*GSPAVA
Trigger: AGCTACTGCCGGGCTCCCCCAACCCTGAGGAACCAA...CTTTGTATGACTGTCATAGACACATGGGTGCTTGAAGAAAGGAGGGACCCGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp ACCAACCATACAATAAGGGCACTGCTTGTACCCAGTTCTTGGGAAGCCACAGTCTGCCCCTCCACCCAGTaGCTCCCAAATATGGATGGC +
Preference number: 4 (lower is better)
Translates to: TNHTIRALLVPSSWEATVCPSTQ*LPNMDG
Trigger: GCCATCCATATTTGGGAGCCACTGGGTGGAGGGGCA...GACTGTGGCTTCCCAAGAACTGGGTACAAGCAGTGCCCTTATTGTATGGTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp TGCTGTGTGCGCAGGTCTGGGAACAAGTGTGCTGGTGGCAAAAATGTAAATGCTCAAGGTGAGGCTGATTaGCCCAAGTTCCGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: CCVRRSGNKCAGGKNVNAQGEAD*PKFRVP
Trigger: AGGGACCCGGAACTTGGGCCAATCAGCCTCACCTTG...AGCATTTACATTTTTGCCACCAGCACACTTGTTCCCAGACCTGCGCACACAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp CAGTCATCAGCAACTCTAAGACTAACCAAGGCTACTTGTCTCATTTTGCCTCCCCCCCTCCTCCCGCCATaGCAGCTCGTGTCATCAGTC +
Preference number: 4 (lower is better)
Translates to: QSSATLRLTKATCLILPPPLLPP*QLVSSV
Trigger: GACTGATGACACGAGCTGCCATGGCGGGAGGAGGGG...GGGAGGCAAAATGAGACAAGTAGCCTTGGTTAGTCTTAGAGTTGCTGATGACTG
53% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp GCCACAGTCATCAGCAACTCTAAGACTAACCAAGGCTACTTGTCTCATTTTGCCCCCCTCCTCCCGCCATaGCAGCTCGTGTCATCAGTC +
Preference number: 4 (lower is better)
Translates to: ATVISNSKTNQGYLSHFAPLLPP*QLVSSV
Trigger: GACTGATGACACGAGCTGCCATGGCGGGAGGAGGGG...GGCAAAATGAGACAAGTAGCCTTGGTTAGTCTTAGAGTTGCTGATGACTGTGGC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
3UTR CAA 72 bp ATGAAGGTACTCAGCACCTGGAAGGTTTGGGCCAGCTaGATCTTATCCCCCAGCATTCTGATGAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: MKVLSTWKVWAS*ILSPSILMRKG
Trigger: CCCCTTCCTCATCAGAATGCTGGGGGATAAGATCAAGCTGGCCCAAACCTTCCAGGTGCTGAGTACCTTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636771.1
CDS-3UTR TCA 90 bp TTTTGCCATGTGTATACAAGAATGGGGTGCTGGGAGGGCCTTGAGGTTAATGCCAGAGAATCCCGTAGGTaGAGTAGCGCAGGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: FCHVYTRMGCWEGLEVNARESRR*SSAGLG
Trigger: CCCTAAGCCTGCGCTACTTCACCTACGGGATTCTCT...GGCATTAACCTCAAGGCCCTCCCAGCACCCCATTCTTGTATACACATGGCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp GGAGACACATTGGGTGGTAAAGGCTGGGATGGCTTCCCCTTCCCAAAAGAAATTATGACGAGGGATGGCTaGAAGGCGAAGGAACAGCCA +
Preference number: 4 (lower is better)
Translates to: GDTLGGKGWDGFPFPKEIMTRDG*KAKEQP
Trigger: TGGCTGTTCCTTCGCCTTTCAGCCATCCCTCGTCAT...AATTTCTTTTGGGAAGGGGAAGCCATCCCAGCCTTTACCACCCAATGTGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp ATGAGTGGGACTGATGCTAGTGTTAGGAGTGGACTGGGACAAGGTGAGGCTGATAGGTTTGGGCCAGCTTaGTCTTATCCCCCAGCATTC +
Preference number: 4 (lower is better)
Translates to: MSGTDASVRSGLGQGEADRFGPA*SYPPAF
Trigger: GAATGCTGGGGGATAAGATCAAGCTGGCCCAAACCT...ATCAGCCTCACCTTGTCCCAGTCCACTCCTAACACTAGCATCAGTCCCACTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp GGGCTCCTAGGGCCCAGATTCTCCTGTTCCACTACTGTTAGAACTGACAGGATAAGGTTTGGGCCAGCTTaGTCTTATCCCCCAGCATTC +
Preference number: 4 (lower is better)
Translates to: GLLGPRFSCSTTVRTDRIRFGPA*SYPPAF
Trigger: GAATGCTGGGGGATAAGATCAAGCTGGCCCAAACCT...TATCCTGTCAGTTCTAACAGTAGTGGAACAGGAGAATCTGGGCCCTAGGAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp GCCATGGCAGCTCGTGTCATCAGTCCTCCTCTACCTGCTGAGATGAAAGGAGTTGGGCCGGTAGGTGAGTaGAAGCAGCATAAGAACAAA +
Preference number: 4 (lower is better)
Translates to: AMAARVISPPLPAEMKGVGPVGE*KQHKNK
Trigger: TTTGTTCTTATGCTGCTTTCACTCACCTACCGGCCC...AACTCCTTTCATCTCAGCAGGTAGAGGAGGACTGATGACACGAGCTGCCATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp CCTCCCGCCATGGCAGCTCGTGTCATCAGTCCTCCTCTACCTGCTGAGATGAAATTCTTGAACATCCTTTaGTGCATCAGAGGGACGAAG +
Preference number: 4 (lower is better)
Translates to: PPAMAARVISPPLPAEMKFLNIL*CIRGTK
Trigger: CTTCGTCCCTCTGATGCATCAAAGGATGTTCAAGAA...TTTCATCTCAGCAGGTAGAGGAGGACTGATGACACGAGCTGCCATGGCGGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp TTCCAAAGGCCAGGGGTGGTTCCCAAGCTTTCCCAGATCCTGGGAGGAGAAAGGAAATATGGATGGCAATaGCCTCCTCAGCAAACAGAG +
Preference number: 4 (lower is better)
Translates to: FQRPGVVPKLSQILGGERKYGWQ*PPQQTE
Trigger: CTCTGTTTGCTGAGGAGGTCATTGCCATCCATATTT...CCTTTCTCCTCCCAGGATCTGGGAAAGCTTGGGAACCACCCCTGGCCTTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp TGCTGTGTGCGCAGGTCTGGGAACAAGTGTGCTGGTGGCAAAAATGTAAATGCTTGGCTCAGCCTGAGATaGGTGGGACTGATGCTAGTG +
Preference number: 4 (lower is better)
Translates to: CCVRRSGNKCAGGKNVNAWLSLR*VGLMLV
Trigger: CACTAGCATCAGTCCCACTCATCTCAGGCTGAGCCA...AGCATTTACATTTTTGCCACCAGCACACTTGTTCCCAGACCTGCGCACACAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp CTCCTCCCCCAGAGCTTAGAAAGTATATGGAGAGGTTCCAAAGGCCAGGGGTGGTCCTCCTCTACCTGCTaGGATGAAAGGAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LLPQSLESIWRGSKGQGWSSSTC*DERSFF
Trigger: GAAGAAACTCCTTTCATCTCAGCAGGTAGAGGAGGA...CCACCCCTGGCCTTTGGAACCTCTCCATATACTTTCTAAGCTCTGGGGGAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp CTGATTGGCCCAAGTTCCGGGTCCCTCCTTTCTTCAAGCACCCATGTGTCTATGGAGCTCCTAATGAGGTaGGCTGTGCTAACTGAACAC +
Preference number: 4 (lower is better)
Translates to: LIGPSSGSLLSSSTHVSMELLMR*AVLTEH
Trigger: GTGTTCAGTTAGCACAGCTCACCTCATTAGGAGCTC...CATAGACACATGGGTGCTTGAAGAAAGGAGGGACCCGGAACTTGGGCCAATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR GCA 90 bp GATTGGCCCAAGTTCCGGGTCCCTCCTTTCTTCAAGCACCCATGTGTCTATGACAGTCCCCAAAACAGTTaGGGAGTAGGCCTGCAAGTA +
Preference number: 4 (lower is better)
Translates to: DWPKFRVPPFFKHPCVYDSPQNS*GVGLQV
Trigger: TACTTGCAGGCCTACTCCGCAACTGTTTTGGGGACT...GTCATAGACACATGGGTGCTTGAAGAAAGGAGGGACCCGGAACTTGGGCCAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590447.1
CDS-3UTR GCA 90 bp GATTGGCCCAAGTTCCGGGTCCCTCCTTTCTTCAAGCACCCATGTGTCTATGACTATACAAGAATGGGGTaGTGGGAGGGCCTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: DWPKFRVPPFFKHPCVYDYTRMG*WEGLEV
Trigger: AACCTCAAGGCCCTCCCAGCACCCCATTCTTGTATA...GTCATAGACACATGGGTGCTTGAAGAAAGGAGGGACCCGGAACTTGGGCCAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR GCA 90 bp AATACTGTGCTGCTTTTGCCAATCAACATTCTCTCCAAAAGCACACAAGCTCACGGCAGCCCCCGCGGTTaGTGTGATTCGGCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: NTVLLLPINILSKSTQAHGSPRG*CDSAAQ
Trigger: TTGGGCTGCCGAATCACAGCAACCGCGGGGGCTGCC...GTGAGCTTGTGTGCTTTTGGAGAGAATGTTGATTGGCAAAAGCAGCACAGTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR GCA 90 bp GAAATGCTGTGTGCGCAGGTCTGGGAACAAGTGTGCTGGTGGCAAAAATGTAAATTGGCAGGGCCATCATaGCCAGGAGGTAGCCAATGG +
Preference number: 4 (lower is better)
Translates to: EMLCAQVWEQVCWWQKCKLAGPS*PGGSQW
Trigger: CCATTGGCTACCTCCTGGGCATGATGGCCCTGCCAA...TTTACATTTTTGCCACCAGCACACTTGTTCCCAGACCTGCGCACACAGCATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR GCA 90 bp AAATGCAATGGGGGCCATGATGGTGATGAAGAAGCCATCGCAAAGGCCCAGGAAAGTCCCCAAAACAGTTaGGGAGTAGGCCTGCAATGG +
Preference number: 4 (lower is better)
Translates to: KCNGGHDGDEEAIAKAQESPQNS*GVGLQW
Trigger: CCATTGCAGGCCTACTCCGCAACTGTTTTGGGGACT...TTCCTGGGCCTTTGCGATGGCTTCTTCATCACCATCATGGCCCCCATTGCATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636771.1
CDS-3UTR GCA 90 bp GAGGTAGCCCCAATACACACCAAGAGCACCCAGGTCTCCTTGATTTCTGAGAACATTGGAGGCCAACCATaGCCCAGCTGCCTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: EVAPIHTKSTQVSLISENIGGQP*PSCLFV
Trigger: TACAAACAGGCAGCTGGGGCATGGTTGGCCTCCAAT...GTTCTCAGAAATCAAGGAGACCTGGGTGCTCTTGGTGTGTATTGGGGCTACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636771.1
CDS-3UTR CCA 90 bp GATTGGCCCAAGTTCCGGGTCCCTCCTTTCTTCAAGCACCCATGTGTCTATGACAGCACCTGGAAGGTTTaGGCCAGCTTGATCTTATCC +
Preference number: 4 (lower is better)
Translates to: DWPKFRVPPFFKHPCVYDSTWKV*ASLILS
Trigger: GGATAAGATCAAGCTGGCCCAAACCTTCCAGGTGCT...GTCATAGACACATGGGTGCTTGAAGAAAGGAGGGACCCGGAACTTGGGCCAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp GGGCTCCTAGGGCCCAGATTCTCCTGTTCCACTACTGTTAGAACTGACAGGATAATGGAGTCACTGATGTaGCCTGACACAAGACGCCCA +
Preference number: 4 (lower is better)
Translates to: GLLGPRFSCSTTVRTDRIMESLM*PDTRRP
Trigger: TGGGCGTCTTGTGTCAGGCCACATCAGTGACTCCAT...TATCCTGTCAGTTCTAACAGTAGTGGAACAGGAGAATCTGGGCCCTAGGAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp GTTTGGAACACCTGGAGCTTTGACTCCAAGGAGATTGTCAGGTGGCTGAAATGCAGCTTTCCCAGATCCTaGGAGGAGAAAGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: VWNTWSFDSKEIVRWLKCSFPRS*EEKGPG
Trigger: TCCAGGGCCTTTCTCCTCCCAGGATCTGGGAAAGCT...GCATTTCAGCCACCTGACAATCTCCTTGGAGTCAAAGCTCCAGGTGTTCCAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp TCAGCAACTCTAAGACTAACCAAGGCTACTTGTCTCATTTTGCCTCCCTGCCCCAGCTTTCCCAGATCCTaGGAGGAGAAAGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: SATLRLTKATCLILPPCPSFPRS*EEKGPG
Trigger: TCCAGGGCCTTTCTCCTCCCAGGATCTGGGAAAGCT...GGGGCAGGGAGGCAAAATGAGACAAGTAGCCTTGGTTAGTCTTAGAGTTGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp GAATGGGGTGCTGGGAGGGCCTTGAGGTTAATGCCTTGGACTGTAAGATTTGTATCCAAAGGCCAGGGGTaGTTCCCAAGCTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: EWGAGRALRLMPWTVRFVSKGQG*FPSFPR
Trigger: TCTGGGAAAGCTTGGGAACCACCCCTGGCCTTTGGA...TACAAATCTTACAGTCCAAGGCATTAACCTCAAGGCCCTCCCAGCACCCCATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp TTTTGCCATGTGTATACAAGAATGGGGTGCTGGGAGGGCCTTGAGGTTAATGCCTCCAAAGGCCAGGGGTaGTTCCCAAGCTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: FCHVYTRMGCWEGLEVNASKGQG*FPSFPR
Trigger: TCTGGGAAAGCTTGGGAACCACCCCTGGCCTTTGGA...GGCATTAACCTCAAGGCCCTCCCAGCACCCCATTCTTGTATACACATGGCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp CTGATTGGCCCAAGTTCCGGGTCCCTCCTTTCTTCAAGCACCCATGTGTCTATGACCCTATTAGGCTCCTaGGGACACAGTAGCACCTTT +
Preference number: 4 (lower is better)
Translates to: LIGPSSGSLLSSSTHVSMTLLGS*GHSSTF
Trigger: AAAGGTGCTACTGTGTCCCCAGGAGCCTAATAGGGT...CATAGACACATGGGTGCTTGAAGAAAGGAGGGACCCGGAACTTGGGCCAATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp CAACCATACAATAAGGGCACTGCTTGTACCCAGTTCTTGGGAAGCCACAGTCATTGCCCCTCCACCCAGTaGCTCCCAAATATGGATGGC +
Preference number: 4 (lower is better)
Translates to: QPYNKGTACTQFLGSHSHCPSTQ*LPNMDG
Trigger: GCCATCCATATTTGGGAGCCACTGGGTGGAGGGGCA...ATGACTGTGGCTTCCCAAGAACTGGGTACAAGCAGTGCCCTTATTGTATGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp CAACCATACAATAAGGGCACTGCTTGTACCCAGTTCTTGGGAAGCCACAGTCATCAAGGTGAGGCTGATTaGCCCAAGTTCCGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: QPYNKGTACTQFLGSHSHQGEAD*PKFRVP
Trigger: AGGGACCCGGAACTTGGGCCAATCAGCCTCACCTTG...ATGACTGTGGCTTCCCAAGAACTGGGTACAAGCAGTGCCCTTATTGTATGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp TTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGAAAATTTAAAAGCATTCTGGGGCAAGGTGAGGCTGATTaGCCCAAGTTCCGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: FPRSWEEKGPGKFKSILGQGEAD*PKFRVP
Trigger: AGGGACCCGGAACTTGGGCCAATCAGCCTCACCTTG...CCCCAGAATGCTTTTAAATTTTCCAGGGCCTTTCTCCTCCCAGGATCTGGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp AATGACCTCCTCAGCAAACAGAGATTTGGGCCTACCCTATTAGGCTCCTGGGGAATCCCGACAGAGTTATaGATGCCGAAGATGGAGCCG +
Preference number: 4 (lower is better)
Translates to: NDLLSKQRFGPTLLGSWGIPTEL*MPKMEP
Trigger: CGGCTCCATCTTCGGCATCCATAACTCTGTCGGGAT...TCCCCAGGAGCCTAATAGGGTAGGCCCAAATCTCTGTTTGCTGAGGAGGTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp ATAAGGGCACTGCTTGTACCCAGTTCTTGGGAAGCCACAGTCATCAGCAACTCTCCTCCTCTAGCAGCATaGAGTAGAGGATCCCGACAG +
Preference number: 4 (lower is better)
Translates to: IRALLVPSSWEATVISNSPPLAA*SRGSRQ
Trigger: CTGTCGGGATCCTCTACTCCATGCTGCTAGAGGAGG...AGAGTTGCTGATGACTGTGGCTTCCCAAGAACTGGGTACAAGCAGTGCCCTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp TCTTCACATTTTGCCATGTGTATACAAGAATGGGGTGCTGGGAGGGCCTTGAGGTTGGGTGGTAAAGGCTaGGATGGCTTCCCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SSHFAMCIQEWGAGRALRLGGKG*DGFPFP
Trigger: TGGGAAGGGGAAGCCATCCCAGCCTTTACCACCCAA...CCTCAAGGCCCTCCCAGCACCCCATTCTTGTATACACATGGCAAAATGTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp CAGTGGGTTTTCCTTTGGGGAGTTGATAAGAGCTGGACTGGGACCAGCGGAGGGAGAGCTAAGAACCAGTaGGTTTTCCTTTGGGGAGTT +
Preference number: 4 (lower is better)
Translates to: QWVFLWGVDKSWTGTSGGRAKNQ*VFLWGV
Trigger: AACTCCCCAAAGGAAAACCCACTGGTTCTTAGCTCT...CCCTCCGCTGGTCCCAGTCCAGCTCTTATCAACTCCCCAAAGGAAAACCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp AGGTCTGGGAACAAGTGTGCTGGTGGCAAAAATGTAAATGCTGAGCAGGGTGGGTTGGTGAGAGTGAGGTaGGGAGAAATGGAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: RSGNKCAGGKNVNAEQGGLVRVR*GEMEAG
Trigger: CCCTGCTTCCATTTCTCCCCACCTCACTCTCACCAA...CCCACCCTGCTCAGCATTTACATTTTTGCCACCAGCACACTTGTTCCCAGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp AATGACCTCCTCAGCAAACAGAGATTTGGGCCTACCCTATTAGGCTCCTGGGGATGTCTTCCCTTCATCTaGAGAGAAGTGGGCGACTGC +
Preference number: 4 (lower is better)
Translates to: NDLLSKQRFGPTLLGSWGCLPFI*REVGDC
Trigger: GCAGTCGCCCACTTCTCTCCAGATGAAGGGAAGACA...TCCCCAGGAGCCTAATAGGGTAGGCCCAAATCTCTGTTTGCTGAGGAGGTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp TTGTTGCTCCAGTATTTTCAGTGGTCTCTCCTGGGAGTTACAGGGCTCCTAGGGGGGCCGGTAGGTGAGTaGAAGCAGCATAAGAACAAA +
Preference number: 4 (lower is better)
Translates to: LLLQYFQWSLLGVTGLLGGPVGE*KQHKNK
Trigger: TTTGTTCTTATGCTGCTTTCACTCACCTACCGGCCC...CCCTAGGAGCCCTGTAACTCCCAGGAGAGACCACTGAAAATACTGGAGCAACAA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp TTCCGGGTCCCTCCTTTCTTCAAGCACCCATGTGTCTATGACAGTCATACAAAGAAGTACTTCCTGAGCTaGGCCAGAAAGCGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: FRVPPFFKHPCVYDSHTKKYFLS*ARKRWC
Trigger: GCACCAGCGCTTTCTGGCTCAGCTCAGGAAGTACTT...CTTTGTATGACTGTCATAGACACATGGGTGCTTGAAGAAAGGAGGGACCCGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp AAAGGGCACACAATGGCAAGAAAGGCATTAGATTGGTTCCTCAGGGTTGGGGGAGCACCCAGGTCTCCTTaGTTTCTGAGAACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KGHTMARKALDWFLRVGGAPRSP*FLRTPP
Trigger: AGGAGGAGTTCTCAGAAATCAAGGAGACCTGGGTGC...TCCCCCAACCCTGAGGAACCAATCTAATGCCTTTCTTGCCATTGTGTGCCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp TCCCAAGCTTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGAAAATTTAAAAGCACAGGGATGGAGTCACTaGTGTGGCCTGACACAAGAC +
Preference number: 4 (lower is better)
Translates to: SQAFPDPGRRKALENLKAQGWSH*CGLTQD
Trigger: GTCTTGTGTCAGGCCACATCAGTGACTCCATCCCTG...TGCTTTTAAATTTTCCAGGGCCTTTCTCCTCCCAGGATCTGGGAAAGCTTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp CCCTCTAAGCAAAGTGGCCTAGGATGCCCAGCATGGGAGACACATTGGGTGGTATTCTTGAACATCCTTTaGTGCATCAGAGGGACGAAG +
Preference number: 4 (lower is better)
Translates to: PSKQSGLGCPAWETHWVVFLNIL*CIRGTK
Trigger: CTTCGTCCCTCTGATGCATCAAAGGATGTTCAAGAA...TACCACCCAATGTGTCTCCCATGCTGGGCATCCTAGGCCACTTTGCTTAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp GCCATGGCAGCTCGTGTCATCAGTCCTCCTCTACCTGCTGAGATGAAAGGAGTTCAAAAATGTAAATGCTaGGCAGGGTGGGATGAAGGG +
Preference number: 4 (lower is better)
Translates to: AMAARVISPPLPAEMKGVQKCKC*AGWDEG
Trigger: CCCTTCATCCCACCCTGCTCAGCATTTACATTTTTG...AACTCCTTTCATCTCAGCAGGTAGAGGAGGACTGATGACACGAGCTGCCATGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp GCCATGGCAGCTCGTGTCATCAGTCCTCCTCTACCTGCTGAGATGAAAGGAGTTTCCTCCTCTACCTGCTaGGATGAAAGGAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: AMAARVISPPLPAEMKGVSSSTC*DERSFF
Trigger: GAAGAAACTCCTTTCATCTCAGCAGGTAGAGGAGGA...AACTCCTTTCATCTCAGCAGGTAGAGGAGGACTGATGACACGAGCTGCCATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp TCCGGGTCCCTCCTTTCTTCAAGCACCCATGTGTCTATGACAGTCATACAAAGAAGAACCACCCTCTGGTaGCTTGGTGAGAGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: SGSLLSSSTHVSMTVIQRRTTLW*LGESEV
Trigger: CACCTCACTCTCACCAAGTCACCAGAGGGTGGTTCT...TCTTTGTATGACTGTCATAGACACATGGGTGCTTGAAGAAAGGAGGGACCCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp AAAGGGCACACAATGGCAAGAAAGGCATTAGATTGGTTCCTCAGGGTTGGGGGAAAGTGGGCGACTGCCTaGTTCTTAAGAGCCATCTGC +
Preference number: 4 (lower is better)
Translates to: KGHTMARKALDWFLRVGGKWATA*FLRAIC
Trigger: GCAGATGGCTCTTAAGAATCAGGCAGTCGCCCACTT...TCCCCCAACCCTGAGGAACCAATCTAATGCCTTTCTTGCCATTGTGTGCCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636771.1
CDS-3UTR TCA 90 bp TTTTCAGTGGTCTCTCCTGGGAGTTACAGGGCTCCTAGGGCCCAGATTCTCCTGCAGATTTGGGACCTATaGATGTCTTCCCTTCATCTG +
Preference number: 4 (lower is better)
Translates to: FSVVSPGSYRAPRAQILLQIWDL*MSSLHL
Trigger: CAGATGAAGGGAAGACATTCATAGGTCCCAAATCTG...CAGGAGAATCTGGGCCCTAGGAGCCCTGTAACTCCCAGGAGAGACCACTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR GCA 90 bp AAGAACAAACATGAAGGTACTCAGCACCTGGAAGGTTTGGGCCAGCTTGATCTTCGAAGATGGAGCCGTTaGACCAGGTGGCAGCGAACA +
Preference number: 4 (lower is better)
Translates to: KNKHEGTQHLEGLGQLDLRRWSR*TRWQRT
Trigger: TGTTCGCTGCCACCTGGTGCAACGGCTCCATCTTCG...AAGATCAAGCTGGCCCAAACCTTCCAGGTGCTGAGTACCTTCATGTTTGTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636771.1
CDS-3UTR GCA 90 bp TGCTGTGTGCGCAGGTCTGGGAACAAGTGTGCTGGTGGCAAAAATGTAAATGCTCGACAGAGTTATGGATaGCGAAGATGGAGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: CCVRRSGNKCAGGKNVNARQSYG*RRWSRC
Trigger: GCAACGGCTCCATCTTCGGCATCCATAACTCTGTCG...AGCATTTACATTTTTGCCACCAGCACACTTGTTCCCAGACCTGCGCACACAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp TGCTGTGTGCGCAGGTCTGGGAACAAGTGTGCTGGTGGCAAAAATGTAAATGCTCAGGATGACGAGGGATaGCTGAAAGGCGAAGGAACA +
Preference number: 4 (lower is better)
Translates to: CCVRRSGNKCAGGKNVNAQDDEG*LKGEGT
Trigger: TGTTCCTTCGCCTTTCAGCCATCCCTCGTCATCCTG...AGCATTTACATTTTTGCCACCAGCACACTTGTTCCCAGACCTGCGCACACAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp GGGAAAGGGCACACAATGGCAAGAAAGGCATTAGATTGGTTCCTCAGGGTTGGGAGCACCTGGAAGGTTTaGGCCAGCTTGATCTTATCC +
Preference number: 4 (lower is better)
Translates to: GKGHTMARKALDWFLRVGSTWKV*ASLILS
Trigger: GGATAAGATCAAGCTGGCCCAAACCTTCCAGGTGCT...CCCAACCCTGAGGAACCAATCTAATGCCTTTCTTGCCATTGTGTGCCCTTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp TTTTCCAACCCTATGTGCAACTGCTGCCTGTACCTTTTTGGGATCCAGGCTAGGAAGGTACTCAGCACCTaGAAGGTTTGGGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: FSNPMCNCCLYLFGIQARKVLST*KVWASL
Trigger: CAAGCTGGCCCAAACCTTCCAGGTGCTGAGTACCTT...CCTAGCCTGGATCCCAAAAAGGTACAGGCAGCAGTTGCACATAGGGTTGGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp TGCTGTGTGCGCAGGTCTGGGAACAAGTGTGCTGGTGGCAAAAATGTAAATGCTAAGGTACTCAGCACCTaGAAGGTTTGGGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: CCVRRSGNKCAGGKNVNAKVLST*KVWASL
Trigger: CAAGCTGGCCCAAACCTTCCAGGTGCTGAGTACCTT...AGCATTTACATTTTTGCCACCAGCACACTTGTTCCCAGACCTGCGCACACAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp GTTTGGAACACCTGGAGCTTTGACTCCAAGGAGATTGTCAGGTGGCTGAAATGCATGGAGTCACTGATGTaGCCTGACACAAGACGCCCA +
Preference number: 4 (lower is better)
Translates to: VWNTWSFDSKEIVRWLKCMESLM*PDTRRP
Trigger: TGGGCGTCTTGTGTCAGGCCACATCAGTGACTCCAT...GCATTTCAGCCACCTGACAATCTCCTTGGAGTCAAAGCTCCAGGTGTTCCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp CCCCAGAGCTTAGAAAGTATATGGAGAGGTTCCAAAGGCCAGGGGTGGTTCCCAAGAAAGGCATTAGATTaGTTCCTCAGGGTTGGGGGA +
Preference number: 4 (lower is better)
Translates to: PQSLESIWRGSKGQGWFPRKALD*FLRVGG
Trigger: TCCCCCAACCCTGAGGAACCAATCTAATGCCTTTCT...TGGGAACCACCCCTGGCCTTTGGAACCTCTCCATATACTTTCTAAGCTCTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp TTTTGCCATGTGTATACAAGAATGGGGTGCTGGGAGGGCCTTGAGGTTAATGCCATGAAGGGGAAGAGCTaGGAAAGGGCACACAATGGC +
Preference number: 4 (lower is better)
Translates to: FCHVYTRMGCWEGLEVNAMKGKS*ERAHNG
Trigger: GCCATTGTGTGCCCTTTCCCAGCTCTTCCCCTTCAT...GGCATTAACCTCAAGGCCCTCCCAGCACCCCATTCTTGTATACACATGGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp GGCATTGTTGCTCCAGTATTTTCAGTGGTCTCTCCTGGGAGTTACAGGGCTCCTAAGGAGATTGTCAGGTaGCTGAAATGCTGTGTGCGC +
Preference number: 4 (lower is better)
Translates to: GIVAPVFSVVSPGSYRAPKEIVR*LKCCVR
Trigger: GCGCACACAGCATTTCAGCCACCTGACAATCTCCTT...AGGAGCCCTGTAACTCCCAGGAGAGACCACTGAAAATACTGGAGCAACAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp GACAAGGTGAGGCTGATTGGCCCAAGTTCCGGGTCCCTCCTTTCTTCAAGCACCAGCTTAGAAAGTATATaGAGAGGTTCCAAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: DKVRLIGPSSGSLLSSSTSLESI*RGSKGQ
Trigger: CTGGCCTTTGGAACCTCTCCATATACTTTCTAAGCT...GGTGCTTGAAGAAAGGAGGGACCCGGAACTTGGGCCAATCAGCCTCACCTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp AACATGAAGGTACTCAGCACCTGGAAGGTTTGGGCCAGCTTGATCTTATCCCCCCTTGTACCCAGTTCTTaGGAAGCCACAGTCATCAGC +
Preference number: 4 (lower is better)
Translates to: NMKVLSTWKVWASLILSPLVPSS*EATVIS
Trigger: GCTGATGACTGTGGCTTCCCAAGAACTGGGTACAAG...GGGGGATAAGATCAAGCTGGCCCAAACCTTCCAGGTGCTGAGTACCTTCATGTT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000636771.1
CDS-3UTR CCA 90 bp GGAGACACATTGGGTGGTAAAGGCTGGGATGGCTTCCCCTTCCCAAAAGAAATTATCCCGACAGAGTTATaGATGCCGAAGATGGAGCCG +
Preference number: 4 (lower is better)
Translates to: GDTLGGKGWDGFPFPKEIIPTEL*MPKMEP
Trigger: CGGCTCCATCTTCGGCATCCATAACTCTGTCGGGAT...AATTTCTTTTGGGAAGGGGAAGCCATCCCAGCCTTTACCACCCAATGTGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp CTGAAATGCTGTGTGCGCAGGTCTGGGAACAAGTGTGCTGGTGGCAAAAATGTACCGACCCATGCTGCTTaGAACTCCACTTGGCGATTT +
Preference number: 4 (lower is better)
Translates to: LKCCVRRSGNKCAGGKNVPTHAA*NSTWRF
Trigger: AAATCGCCAAGTGGAGTTCCAAGCAGCATGGGTCGG...TACATTTTTGCCACCAGCACACTTGTTCCCAGACCTGCGCACACAGCATTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587091.6
CDS-3UTR CCA 90 bp CAAATATGGATGGCAATGACCTCCTCAGCAAACAGAGATTTGGGCCTACCCTATCCAGGAGGTAGCCAATaGCCTGTGAGGCCTGCATTG +
Preference number: 4 (lower is better)
Translates to: QIWMAMTSSANRDLGLPYPGGSQ*PVRPAL
Trigger: CAATGCAGGCCTCACAGGCCATTGGCTACCTCCTGG...ATAGGGTAGGCCCAAATCTCTGTTTGCTGAGGAGGTCATTGCCATCCATATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp GAAATGCTGTGTGCGCAGGTCTGGGAACAAGTGTGCTGGTGGCAAAAATGTAAATTGGGTGGTAAAGGCTaGGATGGCTTCCCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: EMLCAQVWEQVCWWQKCKLGGKG*DGFPFP
Trigger: TGGGAAGGGGAAGCCATCCCAGCCTTTACCACCCAA...TTTACATTTTTGCCACCAGCACACTTGTTCCCAGACCTGCGCACACAGCATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp ACAAGAATGGGGTGCTGGGAGGGCCTTGAGGTTAATGCCTTGGACTGTAAGATTGTGGCAAGTTACTGTTaGCTCCAAGTGACAGCCAGG +
Preference number: 4 (lower is better)
Translates to: TRMGCWEGLEVNALDCKIVASYC*LQVTAR
Trigger: CCTGGCTGTCACTTGGAGCCAACAGTAACTTGCCAC...AATCTTACAGTCCAAGGCATTAACCTCAAGGCCCTCCCAGCACCCCATTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp ACAAGAATGGGGTGCTGGGAGGGCCTTGAGGTTAATGCCTTGGACTGTAAGATTTGTCTTCCCTTCATCTaGAGAGAAGTGGGCGACTGC +
Preference number: 4 (lower is better)
Translates to: TRMGCWEGLEVNALDCKICLPFI*REVGDC
Trigger: GCAGTCGCCCACTTCTCTCCAGATGAAGGGAAGACA...AATCTTACAGTCCAAGGCATTAACCTCAAGGCCCTCCCAGCACCCCATTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp GCCACAGTCATCAGCAACTCTAAGACTAACCAAGGCTACTTGTCTCATTTTGCCAAGTACTTCCTGAGCTaGGCCAGAAAGCGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: ATVISNSKTNQGYLSHFAKYFLS*ARKRWC
Trigger: GCACCAGCGCTTTCTGGCTCAGCTCAGGAAGTACTT...GGCAAAATGAGACAAGTAGCCTTGGTTAGTCTTAGAGTTGCTGATGACTGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp CAACCATACAATAAGGGCACTGCTTGTACCCAGTTCTTGGGAAGCCACAGTCATAGATTGTCAGGTGGCTaGAATGCTGTGTGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: QPYNKGTACTQFLGSHSHRLSGG*NAVCAG
Trigger: ACCTGCGCACACAGCATTTCAGCCACCTGACAATCT...ATGACTGTGGCTTCCCAAGAACTGGGTACAAGCAGTGCCCTTATTGTATGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp ACCAACCATACAATAAGGGCACTGCTTGTACCCAGTTCTTGGGAAGCCACAGTCGAACACCTGGAGCTTTaGCTCCAAGGAGATTGTCAG +
Preference number: 4 (lower is better)
Translates to: TNHTIRALLVPSSWEATVEHLEL*LQGDCQ
Trigger: CTGACAATCTCCTTGGAGTCAAAGCTCCAGGTGTTC...GACTGTGGCTTCCCAAGAACTGGGTACAAGCAGTGCCCTTATTGTATGGTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp TTGTTGCTCCAGTATTTTCAGTGGTCTCTCCTGGGAGTTACAGGGCTCCTAGGGGTTGATTATAGTGGGTaGCTAACAAGCTGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: LLLQYFQWSLLGVTGLLGVDYSG*LTSWVQ
Trigger: CTGGACCCAGCTTGTTAGTCACCCACTATAATCAAC...CCCTAGGAGCCCTGTAACTCCCAGGAGAGACCACTGAAAATACTGGAGCAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp CAGTCATCAGCAACTCTAAGACTAACCAAGGCTACTTGTCTCATTTTGCCTCCCTGGCTCAGCCTGAGATaGGTGGGACTGATGCTAGTG +
Preference number: 4 (lower is better)
Translates to: QSSATLRLTKATCLILPPWLSLR*VGLMLV
Trigger: CACTAGCATCAGTCCCACTCATCTCAGGCTGAGCCA...GGGAGGCAAAATGAGACAAGTAGCCTTGGTTAGTCTTAGAGTTGCTGATGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp TTGTTGCTCCAGTATTTTCAGTGGTCTCTCCTGGGAGTTACAGGGCTCCTAGGGACCTGTCATGAAAACTaGGAGATGGGGCTCACCATA +
Preference number: 4 (lower is better)
Translates to: LLLQYFQWSLLGVTGLLGTCHEN*EMGLTI
Trigger: TATGGTGAGCCCCATCTCTCAGTTTTCATGACAGGT...CCCTAGGAGCCCTGTAACTCCCAGGAGAGACCACTGAAAATACTGGAGCAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp CTCCTCCCCCAGAGCTTAGAAAGTATATGGAGAGGTTCCAAAGGCCAGGGGTGGAATATAGACCTGTCATaGAAACTGAGAGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: LLPQSLESIWRGSKGQGWNIDLS*KLRDGA
Trigger: AGCCCCATCTCTCAGTTTTCATGACAGGTCTATATT...CCACCCCTGGCCTTTGGAACCTCTCCATATACTTTCTAAGCTCTGGGGGAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp GAATGGGGTGCTGGGAGGGCCTTGAGGTTAATGCCTTGGACTGTAAGATTTGTAGAGCTCCTAATGAGGTaGGCTGTGCTAACTGAACAC +
Preference number: 4 (lower is better)
Translates to: EWGAGRALRLMPWTVRFVELLMR*AVLTEH
Trigger: GTGTTCAGTTAGCACAGCTCACCTCATTAGGAGCTC...TACAAATCTTACAGTCCAAGGCATTAACCTCAAGGCCCTCCCAGCACCCCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp TTGTTGCTCCAGTATTTTCAGTGGTCTCTCCTGGGAGTTACAGGGCTCCTAGGGGACTTTGGCCTTGAATaGAATCATTGGAGGCCAACC +
Preference number: 4 (lower is better)
Translates to: LLLQYFQWSLLGVTGLLGDFGLE*NHWRPT
Trigger: GGTTGGCCTCCAATGATTTCATTCAAGGCCAAAGTC...CCCTAGGAGCCCTGTAACTCCCAGGAGAGACCACTGAAAATACTGGAGCAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp CAGTGGGTTTTCCTTTGGGGAGTTGATAAGAGCTGGACTGGGACCAGCGGAGGGAAATGTCCCATGTCTTaGGCTCTGAAATTTTGTTCG +
Preference number: 4 (lower is better)
Translates to: QWVFLWGVDKSWTGTSGGKCPMS*ALKFCS
Trigger: CGAACAAAATTTCAGAGCTCAAGACATGGGACATTT...CCCTCCGCTGGTCCCAGTCCAGCTCTTATCAACTCCCCAAAGGAAAACCCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR GCA 90 bp ATCCTCCTCCTCCCCCAGAGCTTAGAAAGTATATGGAGAGGTTCCAAAGGCCAGAGGACATGGAGAAAATaGTACTCCCAGCAGACACCA +
Preference number: 4 (lower is better)
Translates to: ILLLPQSLESIWRGSKGQRTWRK*YSQQTP
Trigger: TGGTGTCTGCTGGGAGTAGCATTTTCTCCATGTCCT...CTGGCCTTTGGAACCTCTCCATATACTTTCTAAGCTCTGGGGGAGGAGGAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR GCA 90 bp ATGAGTGGGACTGATGCTAGTGTTAGGAGTGGACTGGGACAAGGTGAGGCTGATAGGACATGGAGAAAATaGTACTCCCAGCAGACACCA +
Preference number: 4 (lower is better)
Translates to: MSGTDASVRSGLGQGEADRTWRK*YSQQTP
Trigger: TGGTGTCTGCTGGGAGTAGCATTTTCTCCATGTCCT...ATCAGCCTCACCTTGTCCCAGTCCACTCCTAACACTAGCATCAGTCCCACTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR GCA 90 bp CGTGTCATCAGTCCTCCTCTACCTGCTGAGATGAAAGGAGTTTCTTCACATTTTTTCCGAAGGCCCAGATaGGGTAAGTGCGTTGGCGGA +
Preference number: 4 (lower is better)
Translates to: RVISPPLPAEMKGVSSHFFRRPR*GKCVGG
Trigger: TCCGCCAACGCACTTACCGCATCTGGGCCTTCGGAA...AAAATGTGAAGAAACTCCTTTCATCTCAGCAGGTAGAGGAGGACTGATGACACG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR GCA 90 bp ACAAGAATGGGGTGCTGGGAGGGCCTTGAGGTTAATGCCTTGGACTGTAAGATTTATACAAGAATGGGGTaGTGGGAGGGCCTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: TRMGCWEGLEVNALDCKIYTRMG*WEGLEV
Trigger: AACCTCAAGGCCCTCCCAGCACCCCATTCTTGTATA...AATCTTACAGTCCAAGGCATTAACCTCAAGGCCCTCCCAGCACCCCATTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR GCA 90 bp GGGAAAGGGCACACAATGGCAAGAAAGGCATTAGATTGGTTCCTCAGGGTTGGGAACCCTATGTGCAACTaGTGCCTGTACCTTTTTGGG +
Preference number: 4 (lower is better)
Translates to: GKGHTMARKALDWFLRVGNPMCN*CLYLFG
Trigger: CCCAAAAAGGTACAGGCAGCAGTTGCACATAGGGTT...CCCAACCCTGAGGAACCAATCTAATGCCTTTCTTGCCATTGTGTGCCCTTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636771.1
CDS-3UTR CCA 90 bp ATGGCAGCTCGTGTCATCAGTCCTCCTCTACCTGCTGAGATGAAAGGAGTTTCTGGAAGGGGAAGGACATaGAGAAAATGCTACTCCCAG +
Preference number: 4 (lower is better)
Translates to: MAARVISPPLPAEMKGVSGRGRT*RKCYSQ
Trigger: CTGGGAGTAGCATTTTCTCCATGTCCTTCCCCTTCC...AGAAACTCCTTTCATCTCAGCAGGTAGAGGAGGACTGATGACACGAGCTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp TCCGGGTCCCTCCTTTCTTCAAGCACCCATGTGTCTATGACAGTCATACAAAGAAAGGTACTCAGCACCTaGAAGGTTTGGGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SGSLLSSSTHVSMTVIQRKVLST*KVWASL
Trigger: CAAGCTGGCCCAAACCTTCCAGGTGCTGAGTACCTT...TCTTTGTATGACTGTCATAGACACATGGGTGCTTGAAGAAAGGAGGGACCCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp GGCATTGTTGCTCCAGTATTTTCAGTGGTCTCTCCTGGGAGTTACAGGGCTCCTAGAAAGGCATTAGATTaGTTCCTCAGGGTTGGGGGA +
Preference number: 4 (lower is better)
Translates to: GIVAPVFSVVSPGSYRAPRKALD*FLRVGG
Trigger: TCCCCCAACCCTGAGGAACCAATCTAATGCCTTTCT...AGGAGCCCTGTAACTCCCAGGAGAGACCACTGAAAATACTGGAGCAACAATGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp ACCAACCATACAATAAGGGCACTGCTTGTACCCAGTTCTTGGGAAGCCACAGTCAAGGAGATTGTCAGGTaGCTGAAATGCTGTGTGCGC +
Preference number: 4 (lower is better)
Translates to: TNHTIRALLVPSSWEATVKEIVR*LKCCVR
Trigger: GCGCACACAGCATTTCAGCCACCTGACAATCTCCTT...GACTGTGGCTTCCCAAGAACTGGGTACAAGCAGTGCCCTTATTGTATGGTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp GGGAAAGGGCACACAATGGCAAGAAAGGCATTAGATTGGTTCCTCAGGGTTGGGCAGCAAACAGAGATTTaGGCCTACCCTATTAGGCTC +
Preference number: 4 (lower is better)
Translates to: GKGHTMARKALDWFLRVGQQTEI*AYPIRL
Trigger: GAGCCTAATAGGGTAGGCCCAAATCTCTGTTTGCTG...CCCAACCCTGAGGAACCAATCTAATGCCTTTCTTGCCATTGTGTGCCCTTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp TCTTCACATTTTGCCATGTGTATACAAGAATGGGGTGCTGGGAGGGCCTTGAGGCTTGTACCCAGTTCTTaGGAAGCCACAGTCATCAGC +
Preference number: 4 (lower is better)
Translates to: SSHFAMCIQEWGAGRALRLVPSS*EATVIS
Trigger: GCTGATGACTGTGGCTTCCCAAGAACTGGGTACAAG...CCTCAAGGCCCTCCCAGCACCCCATTCTTGTATACACATGGCAAAATGTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp TGCTGTGTGCGCAGGTCTGGGAACAAGTGTGCTGGTGGCAAAAATGTAAATGCTATGTGTATACAAGAATaGGGTGCTGGGAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: CCVRRSGNKCAGGKNVNAMCIQE*GAGRAL
Trigger: CAAGGCCCTCCCAGCACCCCATTCTTGTATACACAT...AGCATTTACATTTTTGCCACCAGCACACTTGTTCCCAGACCTGCGCACACAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp ATGGCAGCTCGTGTCATCAGTCCTCCTCTACCTGCTGAGATGAAAGGAGTTTCTATGTGTATACAAGAATaGGGTGCTGGGAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: MAARVISPPLPAEMKGVSMCIQE*GAGRAL
Trigger: CAAGGCCCTCCCAGCACCCCATTCTTGTATACACAT...AGAAACTCCTTTCATCTCAGCAGGTAGAGGAGGACTGATGACACGAGCTGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp TCCCAAGCTTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGAAAATTTAAAAGCAGCATGGGAGACACATTaGGTGGTAAAGGCTGGGATG +
Preference number: 4 (lower is better)
Translates to: SQAFPDPGRRKALENLKAAWETH*VVKAGM
Trigger: CATCCCAGCCTTTACCACCCAATGTGTCTCCCATGC...TGCTTTTAAATTTTCCAGGGCCTTTCTCCTCCCAGGATCTGGGAAAGCTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp TCTTCACATTTTGCCATGTGTATACAAGAATGGGGTGCTGGGAGGGCCTTGAGGCCTAGCCAGGGGCACTaGGAATGTTCTTCAGTAAGA +
Preference number: 4 (lower is better)
Translates to: SSHFAMCIQEWGAGRALRPSQGH*ECSSVR
Trigger: TCTTACTGAAGAACATTCCCAGTGCCCCTGGCTAGG...CCTCAAGGCCCTCCCAGCACCCCATTCTTGTATACACATGGCAAAATGTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp TTTTGCCATGTGTATACAAGAATGGGGTGCTGGGAGGGCCTTGAGGTTAATGCCGGTCTCCTTGATTTCTaGGAACTCCTCCTCCACATA +
Preference number: 4 (lower is better)
Translates to: FCHVYTRMGCWEGLEVNAGLLDF*ELLLHI
Trigger: TATGTGGAGGAGGAGTTCTCAGAAATCAAGGAGACC...GGCATTAACCTCAAGGCCCTCCCAGCACCCCATTCTTGTATACACATGGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp GTGGTGCATAAGAGGCTGCATCCTACTCTAAATATTAATACTGTGCTGCTTTTGGTCACTGATGTGGCCTaGCACAAGACGCCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: VVHKRLHPTLNINTVLLLVTDVA*HKTPKA
Trigger: GGCCTTGGGCGTCTTGTGTCAGGCCACATCAGTGAC...CAAAAGCAGCACAGTATTAATATTTAGAGTAGGATGCAGCCTCTTATGCACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp CGTGTCATCAGTCCTCCTCTACCTGCTGAGATGAAAGGAGTTTCTTCACATTTTCAGGGATGGAGTCACTaGTGTGGCCTGACACAAGAC +
Preference number: 4 (lower is better)
Translates to: RVISPPLPAEMKGVSSHFQGWSH*CGLTQD
Trigger: GTCTTGTGTCAGGCCACATCAGTGACTCCATCCCTG...AAAATGTGAAGAAACTCCTTTCATCTCAGCAGGTAGAGGAGGACTGATGACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp AGGTCTGGGAACAAGTGTGCTGGTGGCAAAAATGTAAATGCTGAGCAGGGTGGGTTCTTGAACATCCTTTaGTGCATCAGAGGGACGAAG +
Preference number: 4 (lower is better)
Translates to: RSGNKCAGGKNVNAEQGGFLNIL*CIRGTK
Trigger: CTTCGTCCCTCTGATGCATCAAAGGATGTTCAAGAA...CCCACCCTGCTCAGCATTTACATTTTTGCCACCAGCACACTTGTTCCCAGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp ATGGCAGCTCGTGTCATCAGTCCTCCTCTACCTGCTGAGATGAAAGGAGTTTCTCAAAAATGTAAATGCTaGGCAGGGTGGGATGAAGGG +
Preference number: 4 (lower is better)
Translates to: MAARVISPPLPAEMKGVSQKCKC*AGWDEG
Trigger: CCCTTCATCCCACCCTGCTCAGCATTTACATTTTTG...AGAAACTCCTTTCATCTCAGCAGGTAGAGGAGGACTGATGACACGAGCTGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp ATAAGGGCACTGCTTGTACCCAGTTCTTGGGAAGCCACAGTCATCAGCAACTCTGTTGATTATAGTGGGTaGCTAACAAGCTGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: IRALLVPSSWEATVISNSVDYSG*LTSWVQ
Trigger: CTGGACCCAGCTTGTTAGTCACCCACTATAATCAAC...AGAGTTGCTGATGACTGTGGCTTCCCAAGAACTGGGTACAAGCAGTGCCCTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp TTGTTGCTCCAGTATTTTCAGTGGTCTCTCCTGGGAGTTACAGGGCTCCTAGGGAAATATGGATGGCAATaGCCTCCTCAGCAAACAGAG +
Preference number: 4 (lower is better)
Translates to: LLLQYFQWSLLGVTGLLGKYGWQ*PPQQTE
Trigger: CTCTGTTTGCTGAGGAGGTCATTGCCATCCATATTT...CCCTAGGAGCCCTGTAACTCCCAGGAGAGACCACTGAAAATACTGGAGCAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp AATGACCTCCTCAGCAAACAGAGATTTGGGCCTACCCTATTAGGCTCCTGGGGAAAATATGGATGGCAATaGCCTCCTCAGCAAACAGAG +
Preference number: 4 (lower is better)
Translates to: NDLLSKQRFGPTLLGSWGKYGWQ*PPQQTE
Trigger: CTCTGTTTGCTGAGGAGGTCATTGCCATCCATATTT...TCCCCAGGAGCCTAATAGGGTAGGCCCAAATCTCTGTTTGCTGAGGAGGTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp AGCAGCATAAGAACAAACATGAAGGTACTCAGCACCTGGAAGGTTTGGGCCAGCGACTTTGGCCTTGAATaGAATCATTGGAGGCCAACC +
Preference number: 4 (lower is better)
Translates to: SSIRTNMKVLSTWKVWASDFGLE*NHWRPT
Trigger: GGTTGGCCTCCAATGATTTCATTCAAGGCCAAAGTC...GCTGGCCCAAACCTTCCAGGTGCTGAGTACCTTCATGTTTGTTCTTATGCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636771.1
CDS-3UTR TCA 90 bp GGGAAAGGGCACACAATGGCAAGAAAGGCATTAGATTGGTTCCTCAGGGTTGGGCCCGAACTCATTTTATaGGGCCAGCATCATTCTGAT +
Preference number: 4 (lower is better)
Translates to: GKGHTMARKALDWFLRVGPELIL*GQHHSD
Trigger: ATCAGAATGATGCTGGCCTCATAAAATGAGTTCGGG...CCCAACCCTGAGGAACCAATCTAATGCCTTTCTTGCCATTGTGTGCCCTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636771.1
CDS-3UTR GCA 90 bp GGGCTCAGGACTTTGGCCTTGAATGAAATCATTGGAGGCCAACCATGCCCCAGCTTGCTGGAATCTCTCTaGTCTTTCTTGAACATCCTT +
Preference number: 4 (lower is better)
Translates to: GLRTLALNEIIGGQPCPSLLESL*SFLNIL
Trigger: AAGGATGTTCAAGAAAGAGCAGAGAGATTCCAGCAA...GCTGGGGCATGGTTGGCCTCCAATGATTTCATTCAAGGCCAAAGTCCTGAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR GCA 90 bp TGCTGTGTGCGCAGGTCTGGGAACAAGTGTGCTGGTGGCAAAAATGTAAATGCTAACCCTATGTGCAACTaGTGCCTGTACCTTTTTGGG +
Preference number: 4 (lower is better)
Translates to: CCVRRSGNKCAGGKNVNANPMCN*CLYLFG
Trigger: CCCAAAAAGGTACAGGCAGCAGTTGCACATAGGGTT...AGCATTTACATTTTTGCCACCAGCACACTTGTTCCCAGACCTGCGCACACAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp GAATGGGGTGCTGGGAGGGCCTTGAGGTTAATGCCTTGGACTGTAAGATTTGTAAGAAAGGCATTAGATTaGTTCCTCAGGGTTGGGGGA +
Preference number: 4 (lower is better)
Translates to: EWGAGRALRLMPWTVRFVRKALD*FLRVGG
Trigger: TCCCCCAACCCTGAGGAACCAATCTAATGCCTTTCT...TACAAATCTTACAGTCCAAGGCATTAACCTCAAGGCCCTCCCAGCACCCCATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp TCCCAAGCTTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGAAAATTTAAAAGCAACCCTATTAGGCTCCTaGGGACACAGTAGCACCTTT +
Preference number: 4 (lower is better)
Translates to: SQAFPDPGRRKALENLKATLLGS*GHSSTF
Trigger: AAAGGTGCTACTGTGTCCCCAGGAGCCTAATAGGGT...TGCTTTTAAATTTTCCAGGGCCTTTCTCCTCCCAGGATCTGGGAAAGCTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp CTGAAATGCTGTGTGCGCAGGTCTGGGAACAAGTGTGCTGGTGGCAAAAATGTACAGCAAACAGAGATTTaGGCCTACCCTATTAGGCTC +
Preference number: 4 (lower is better)
Translates to: LKCCVRRSGNKCAGGKNVQQTEI*AYPIRL
Trigger: GAGCCTAATAGGGTAGGCCCAAATCTCTGTTTGCTG...TACATTTTTGCCACCAGCACACTTGTTCCCAGACCTGCGCACACAGCATTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp GCCATGGCAGCTCGTGTCATCAGTCCTCCTCTACCTGCTGAGATGAAAGGAGTTTCAGTGACTGGAACATaGAACACTGTGGTGTTTAAG +
Preference number: 4 (lower is better)
Translates to: AMAARVISPPLPAEMKGVSVTGT*NTVVFK
Trigger: CTTAAACACCACAGTGTTCCATGTTCCAGTCACTGA...AACTCCTTTCATCTCAGCAGGTAGAGGAGGACTGATGACACGAGCTGCCATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp GAAATGCTGTGTGCGCAGGTCTGGGAACAAGTGTGCTGGTGGCAAAAATGTAAAACAAGAATGGGGTGCTaGGAGGGCCTTGAGGTTAAT +
Preference number: 4 (lower is better)
Translates to: EMLCAQVWEQVCWWQKCKTRMGC*EGLEVN
Trigger: ATTAACCTCAAGGCCCTCCCAGCACCCCATTCTTGT...TTTACATTTTTGCCACCAGCACACTTGTTCCCAGACCTGCGCACACAGCATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp TTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGAAAATTTAAAAGCATTCTGGGGACAAGAATGGGGTGCTaGGAGGGCCTTGAGGTTAAT +
Preference number: 4 (lower is better)
Translates to: FPRSWEEKGPGKFKSILGTRMGC*EGLEVN
Trigger: ATTAACCTCAAGGCCCTCCCAGCACCCCATTCTTGT...CCCCAGAATGCTTTTAAATTTTCCAGGGCCTTTCTCCTCCCAGGATCTGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp CTACCCACAGAGCTAAGAACCAGTGGGTTTTCCTTTGGGGAGTTGATAAGAGCTACAAGAATGGGGTGCTaGGAGGGCCTTGAGGTTAAT +
Preference number: 4 (lower is better)
Translates to: LPTELRTSGFSFGELIRATRMGC*EGLEVN
Trigger: ATTAACCTCAAGGCCCTCCCAGCACCCCATTCTTGT...AGCTCTTATCAACTCCCCAAAGGAAAACCCACTGGTTCTTAGCTCTGTGGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp GCCACAGTCATCAGCAACTCTAAGACTAACCAAGGCTACTTGTCTCATTTTGCCTTGGTGAGAGTGAGGTaGGGAGAAATGGAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: ATVISNSKTNQGYLSHFALVRVR*GEMEAG
Trigger: CCCTGCTTCCATTTCTCCCCACCTCACTCTCACCAA...GGCAAAATGAGACAAGTAGCCTTGGTTAGTCTTAGAGTTGCTGATGACTGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp CGTGTCATCAGTCCTCCTCTACCTGCTGAGATGAAAGGAGTTTCTTCACATTTTAGGTTTGGGCCAGCTTaGTCTTATCCCCCAGCATTC +
Preference number: 4 (lower is better)
Translates to: RVISPPLPAEMKGVSSHFRFGPA*SYPPAF
Trigger: GAATGCTGGGGGATAAGATCAAGCTGGCCCAAACCT...AAAATGTGAAGAAACTCCTTTCATCTCAGCAGGTAGAGGAGGACTGATGACACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp TCCCAAGCTTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGAAAATTTAAAAGCAGGTCTCCTTGATTTCTaGGAACTCCTCCTCCACATA +
Preference number: 4 (lower is better)
Translates to: SQAFPDPGRRKALENLKAGLLDF*ELLLHI
Trigger: TATGTGGAGGAGGAGTTCTCAGAAATCAAGGAGACC...TGCTTTTAAATTTTCCAGGGCCTTTCTCCTCCCAGGATCTGGGAAAGCTTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp CGTGTCATCAGTCCTCCTCTACCTGCTGAGATGAAAGGAGTTTCTTCACATTTTGCACCCAGGTCTCCTTaGTTTCTGAGAACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RVISPPLPAEMKGVSSHFAPRSP*FLRTPP
Trigger: AGGAGGAGTTCTCAGAAATCAAGGAGACCTGGGTGC...AAAATGTGAAGAAACTCCTTTCATCTCAGCAGGTAGAGGAGGACTGATGACACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp GCCACAGTCATCAGCAACTCTAAGACTAACCAAGGCTACTTGTCTCATTTTGCCGAACACCTGGAGCTTTaGCTCCAAGGAGATTGTCAG +
Preference number: 4 (lower is better)
Translates to: ATVISNSKTNQGYLSHFAEHLEL*LQGDCQ
Trigger: CTGACAATCTCCTTGGAGTCAAAGCTCCAGGTGTTC...GGCAAAATGAGACAAGTAGCCTTGGTTAGTCTTAGAGTTGCTGATGACTGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp TTCCGGGTCCCTCCTTTCTTCAAGCACCCATGTGTCTATGACAGTCATACAAAGGTTGATTATAGTGGGTaGCTAACAAGCTGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: FRVPPFFKHPCVYDSHTKVDYSG*LTSWVQ
Trigger: CTGGACCCAGCTTGTTAGTCACCCACTATAATCAAC...CTTTGTATGACTGTCATAGACACATGGGTGCTTGAAGAAAGGAGGGACCCGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp CCCCAGAGCTTAGAAAGTATATGGAGAGGTTCCAAAGGCCAGGGGTGGTTCCCAGGTTTCTTCCCTATATaGTATTCTACTCTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: PQSLESIWRGSKGQGWFPGFFPI*YSTLPV
Trigger: GACTGGAAGAGTAGAATATCATATAGGGAAGAAACC...TGGGAACCACCCCTGGCCTTTGGAACCTCTCCATATACTTTCTAAGCTCTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp GGGTGGTTCCCAAGCTTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGAAAATTTGGTTTCTTCCCTATATaGTATTCTACTCTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: GWFPSFPRSWEEKGPGKFGFFPI*YSTLPV
Trigger: GACTGGAAGAGTAGAATATCATATAGGGAAGAAACC...AAATTTTCCAGGGCCTTTCTCCTCCCAGGATCTGGGAAAGCTTGGGAACCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp GAAATGCTGTGTGCGCAGGTCTGGGAACAAGTGTGCTGGTGGCAAAAATGTAAATCCTCCTCTACCTGCTaGGATGAAAGGAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: EMLCAQVWEQVCWWQKCKSSSTC*DERSFF
Trigger: GAAGAAACTCCTTTCATCTCAGCAGGTAGAGGAGGA...TTTACATTTTTGCCACCAGCACACTTGTTCCCAGACCTGCGCACACAGCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp TTCCGGGTCCCTCCTTTCTTCAAGCACCCATGTGTCTATGACAGTCATACAAAGAGCCCAAACGGTCAGTaGATATACTCACAATGGGAG +
Preference number: 4 (lower is better)
Translates to: FRVPPFFKHPCVYDSHTKSPNGQ*IYSQWE
Trigger: CTCCCATTGTGAGTATATTCACTGACCGTTTGGGCT...CTTTGTATGACTGTCATAGACACATGGGTGCTTGAAGAAAGGAGGGACCCGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp TTGTTCGTTCTAGATTTAACTGTGGTGCATAAGAGGCTGCATCCTACTCTAAATGGCTTAGGGAGCTGGTaGAGGAGCTGGTATGGAGGC +
Preference number: 4 (lower is better)
Translates to: LFVLDLTVVHKRLHPTLNGLGSW*RSWYGG
Trigger: GCCTCCATACCAGCTCCTTCACCAGCTCCCTAAGCC...ATTTAGAGTAGGATGCAGCCTCTTATGCACCACAGTTAAATCTAGAACGAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp CCCAGTTCTTGGGAAGCCACAGTCATCAGCAACTCTAAGACTAACCAAGGCTACCAGATTTGGGACCTATaGATGTCTTCCCTTCATCTG +
Preference number: 4 (lower is better)
Translates to: PSSWEATVISNSKTNQGYQIWDL*MSSLHL
Trigger: CAGATGAAGGGAAGACATTCATAGGTCCCAAATCTG...GTAGCCTTGGTTAGTCTTAGAGTTGCTGATGACTGTGGCTTCCCAAGAACTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp GGGTGGTTCCCAAGCTTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGAAAATTTAAATGTCCCATGTCTTaGGCTCTGAAATTTTGTTCG +
Preference number: 4 (lower is better)
Translates to: GWFPSFPRSWEEKGPGKFKCPMS*ALKFCS
Trigger: CGAACAAAATTTCAGAGCTCAAGACATGGGACATTT...AAATTTTCCAGGGCCTTTCTCCTCCCAGGATCTGGGAAAGCTTGGGAACCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR GCA 90 bp GTGGTGCATAAGAGGCTGCATCCTACTCTAAATATTAATACTGTGCTGCTTTTGTTCCGAAGGCCCAGATaGGGTAAGTGCGTTGGCGGA +
Preference number: 4 (lower is better)
Translates to: VVHKRLHPTLNINTVLLLFRRPR*GKCVGG
Trigger: TCCGCCAACGCACTTACCGCATCTGGGCCTTCGGAA...CAAAAGCAGCACAGTATTAATATTTAGAGTAGGATGCAGCCTCTTATGCACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR GCA 90 bp CTGATTGGCCCAAGTTCCGGGTCCCTCCTTTCTTCAAGCACCCATGTGTCTATGTTGCTGGAATCTCTCTaGTCTTTCTTGAACATCCTT +
Preference number: 4 (lower is better)
Translates to: LIGPSSGSLLSSSTHVSMLLESL*SFLNIL
Trigger: AAGGATGTTCAAGAAAGAGCAGAGAGATTCCAGCAA...CATAGACACATGGGTGCTTGAAGAAAGGAGGGACCCGGAACTTGGGCCAATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR GCA 90 bp CAGTCATCAGCAACTCTAAGACTAACCAAGGCTACTTGTCTCATTTTGCCTCCCTATACAAGAATGGGGTaGTGGGAGGGCCTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: QSSATLRLTKATCLILPPYTRMG*WEGLEV
Trigger: AACCTCAAGGCCCTCCCAGCACCCCATTCTTGTATA...GGGAGGCAAAATGAGACAAGTAGCCTTGGTTAGTCTTAGAGTTGCTGATGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR GCA 90 bp TTTTCCAACCCTATGTGCAACTGCTGCCTGTACCTTTTTGGGATCCAGGCTAGGTTTTCCAACCCTATGTaGAACTGCTGCCTGTACCTT +
Preference number: 4 (lower is better)
Translates to: FSNPMCNCCLYLFGIQARFSNPM*NCCLYL
Trigger: AAGGTACAGGCAGCAGTTGCACATAGGGTTGGAAAA...CCTAGCCTGGATCCCAAAAAGGTACAGGCAGCAGTTGCACATAGGGTTGGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR GCA 90 bp CTCCTAGGGCCCAGATTCTCCTGTTCCACTACTGTTAGAACTGACAGGATAGTAAGAGAAGTGGGCGACTaGCTGATTCTTAAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: LLGPRFSCSTTVRTDRIVREVGD*LILKSH
Trigger: ATGGCTCTTAAGAATCAGGCAGTCGCCCACTTCTCT...TACTATCCTGTCAGTTCTAACAGTAGTGGAACAGGAGAATCTGGGCCCTAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp GGCATTGTTGCTCCAGTATTTTCAGTGGTCTCTCCTGGGAGTTACAGGGCTCCTGAACATGGAACACTGTaGTGTTTAAGGTTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: GIVAPVFSVVSPGSYRAPEHGTL*CLRFLP
Trigger: GGGAAGAAACCTTAAACACCACAGTGTTCCATGTTC...AGGAGCCCTGTAACTCCCAGGAGAGACCACTGAAAATACTGGAGCAACAATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp AAGAACAAACATGAAGGTACTCAGCACCTGGAAGGTTTGGGCCAGCTTGATCTTATGTGTATACAAGAATaGGGTGCTGGGAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: KNKHEGTQHLEGLGQLDLMCIQE*GAGRAL
Trigger: CAAGGCCCTCCCAGCACCCCATTCTTGTATACACAT...AAGATCAAGCTGGCCCAAACCTTCCAGGTGCTGAGTACCTTCATGTTTGTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636771.1
CDS-3UTR CCA 90 bp CAGTCATCAGCAACTCTAAGACTAACCAAGGCTACTTGTCTCATTTTGCCTCCCCCTAGCCAGGGGCACTaGGAATGTTCTTCAGTAAGA +
Preference number: 4 (lower is better)
Translates to: QSSATLRLTKATCLILPPPSQGH*ECSSVR
Trigger: TCTTACTGAAGAACATTCCCAGTGCCCCTGGCTAGG...GGGAGGCAAAATGAGACAAGTAGCCTTGGTTAGTCTTAGAGTTGCTGATGACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp GTGGTGCATAAGAGGCTGCATCCTACTCTAAATATTAATACTGTGCTGCTTTTGGGAGTTGATAAGAGCTaGACTGGGACCAGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: VVHKRLHPTLNINTVLLLGVDKS*TGTSGG
Trigger: CCCTCCGCTGGTCCCAGTCCAGCTCTTATCAACTCC...CAAAAGCAGCACAGTATTAATATTTAGAGTAGGATGCAGCCTCTTATGCACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp TTTTGCCATGTGTATACAAGAATGGGGTGCTGGGAGGGCCTTGAGGTTAATGCCAGAGCTAAGAACCAGTaGGTTTTCCTTTGGGGAGTT +
Preference number: 4 (lower is better)
Translates to: FCHVYTRMGCWEGLEVNARAKNQ*VFLWGV
Trigger: AACTCCCCAAAGGAAAACCCACTGGTTCTTAGCTCT...GGCATTAACCTCAAGGCCCTCCCAGCACCCCATTCTTGTATACACATGGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp ACCAACCATACAATAAGGGCACTGCTTGTACCCAGTTCTTGGGAAGCCACAGTCATACCAAAGCCTGCTTaGAACTCCACTTGGCGATTT +
Preference number: 4 (lower is better)
Translates to: TNHTIRALLVPSSWEATVIPKPA*NSTWRF
Trigger: AAATCGCCAAGTGGAGTTCCAAGCAGGCTTTGGTAT...GACTGTGGCTTCCCAAGAACTGGGTACAAGCAGTGCCCTTATTGTATGGTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636771.1
CDS-3UTR TCA 90 bp AATGACCTCCTCAGCAAACAGAGATTTGGGCCTACCCTATTAGGCTCCTGGGGAGCACCCATGTGTCTATaGCAGTCATACAAAGAAATA +
Preference number: 4 (lower is better)
Translates to: NDLLSKQRFGPTLLGSWGAPMCL*QSYKEI
Trigger: TATTTCTTTGTATGACTGTCATAGACACATGGGTGC...TCCCCAGGAGCCTAATAGGGTAGGCCCAAATCTCTGTTTGCTGAGGAGGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp GGGAAAGGGCACACAATGGCAAGAAAGGCATTAGATTGGTTCCTCAGGGTTGGGGGTTTCTTCCCTATATaGTATTCTACTCTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: GKGHTMARKALDWFLRVGGFFPI*YSTLPV
Trigger: GACTGGAAGAGTAGAATATCATATAGGGAAGAAACC...CCCAACCCTGAGGAACCAATCTAATGCCTTTCTTGCCATTGTGTGCCCTTTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp ACCAACCATACAATAAGGGCACTGCTTGTACCCAGTTCTTGGGAAGCCACAGTCCTCTACCTGCTGAGATaGAAGGAGTTTCTTCACATT +
Preference number: 4 (lower is better)
Translates to: TNHTIRALLVPSSWEATVLYLLR*KEFLHI
Trigger: AATGTGAAGAAACTCCTTTCATCTCAGCAGGTAGAG...GACTGTGGCTTCCCAAGAACTGGGTACAAGCAGTGCCCTTATTGTATGGTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp CAAATATGGATGGCAATGACCTCCTCAGCAAACAGAGATTTGGGCCTACCCTATACCTGTCATGAAAACTaGGAGATGGGGCTCACCATA +
Preference number: 4 (lower is better)
Translates to: QIWMAMTSSANRDLGLPYTCHEN*EMGLTI
Trigger: TATGGTGAGCCCCATCTCTCAGTTTTCATGACAGGT...ATAGGGTAGGCCCAAATCTCTGTTTGCTGAGGAGGTCATTGCCATCCATATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp GAATGGGGTGCTGGGAGGGCCTTGAGGTTAATGCCTTGGACTGTAAGATTTGTAAATATAGACCTGTCATaGAAACTGAGAGATGGGGCT +
Preference number: 4 (lower is better)
Translates to: EWGAGRALRLMPWTVRFVNIDLS*KLRDGA
Trigger: AGCCCCATCTCTCAGTTTTCATGACAGGTCTATATT...TACAAATCTTACAGTCCAAGGCATTAACCTCAAGGCCCTCCCAGCACCCCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp AGCAGCATAAGAACAAACATGAAGGTACTCAGCACCTGGAAGGTTTGGGCCAGCTCCCACCATATTATGTaGCATCTGAATGGGCAGATT +
Preference number: 4 (lower is better)
Translates to: SSIRTNMKVLSTWKVWASSHHIM*HLNGQI
Trigger: AATCTGCCCATTCAGATGTCACATAATATGGTGGGA...GCTGGCCCAAACCTTCCAGGTGCTGAGTACCTTCATGTTTGTTCTTATGCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636771.1
CDS-3UTR GCA 90 bp ACCAACCATACAATAAGGGCACTGCTTGTACCCAGTTCTTGGGAAGCCACAGTCCCAACATCTTATCCTTaGTGGAATCTCTCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: TNHTIRALLVPSSWEATVPTSYP*WNLSAL
Trigger: AAGAGCAGAGAGATTCCAGCAAGGATAAGATGTTGG...GACTGTGGCTTCCCAAGAACTGGGTACAAGCAGTGCCCTTATTGTATGGTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR GCA 90 bp TCCCAAGCTTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGAAAATTTAAAAGCATTTTCCAACCCTATGTaGAACTGCTGCCTGTACCTT +
Preference number: 4 (lower is better)
Translates to: SQAFPDPGRRKALENLKAFSNPM*NCCLYL
Trigger: AAGGTACAGGCAGCAGTTGCACATAGGGTTGGAAAA...TGCTTTTAAATTTTCCAGGGCCTTTCTCCTCCCAGGATCTGGGAAAGCTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR GCA 90 bp CAACCATACAATAAGGGCACTGCTTGTACCCAGTTCTTGGGAAGCCACAGTCATACACAAGCTCACATGTaGACAACCACATGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: QPYNKGTACTQFLGSHSHTQAHM*TTTCVE
Trigger: TTCCACACATGTGGTTGTGCACATGTGAGCTTGTGT...ATGACTGTGGCTTCCCAAGAACTGGGTACAAGCAGTGCCCTTATTGTATGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp ACCAACCATACAATAAGGGCACTGCTTGTACCCAGTTCTTGGGAAGCCACAGTCAGCTTAGAAAGTATATaGAGAGGTTCCAAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: TNHTIRALLVPSSWEATVSLESI*RGSKGQ
Trigger: CTGGCCTTTGGAACCTCTCCATATACTTTCTAAGCT...GACTGTGGCTTCCCAAGAACTGGGTACAAGCAGTGCCCTTATTGTATGGTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp GGAGACACATTGGGTGGTAAAGGCTGGGATGGCTTCCCCTTCCCAAAAGAAATTAGCTTAGAAAGTATATaGAGAGGTTCCAAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GDTLGGKGWDGFPFPKEISLESI*RGSKGQ
Trigger: CTGGCCTTTGGAACCTCTCCATATACTTTCTAAGCT...AATTTCTTTTGGGAAGGGGAAGCCATCCCAGCCTTTACCACCCAATGTGTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp AATATGGATGGCAATGACCTCCTCAGCAAACAGAGATTTGGGCCTACCCTATTAACCCTATTAGGCTCCTaGGGACACAGTAGCACCTTT +
Preference number: 4 (lower is better)
Translates to: NMDGNDLLSKQRFGPTLLTLLGS*GHSSTF
Trigger: AAAGGTGCTACTGTGTCCCCAGGAGCCTAATAGGGT...TAATAGGGTAGGCCCAAATCTCTGTTTGCTGAGGAGGTCATTGCCATCCATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp ACCAACCATACAATAAGGGCACTGCTTGTACCCAGTTCTTGGGAAGCCACAGTCTCAGTGACTGGAACATaGAACACTGTGGTGTTTAAG +
Preference number: 4 (lower is better)
Translates to: TNHTIRALLVPSSWEATVSVTGT*NTVVFK
Trigger: CTTAAACACCACAGTGTTCCATGTTCCAGTCACTGA...GACTGTGGCTTCCCAAGAACTGGGTACAAGCAGTGCCCTTATTGTATGGTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp TTTTGCCATGTGTATACAAGAATGGGGTGCTGGGAGGGCCTTGAGGTTAATGCCTCAGTGACTGGAACATaGAACACTGTGGTGTTTAAG +
Preference number: 4 (lower is better)
Translates to: FCHVYTRMGCWEGLEVNASVTGT*NTVVFK
Trigger: CTTAAACACCACAGTGTTCCATGTTCCAGTCACTGA...GGCATTAACCTCAAGGCCCTCCCAGCACCCCATTCTTGTATACACATGGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp TCTTCACATTTTGCCATGTGTATACAAGAATGGGGTGCTGGGAGGGCCTTGAGGTCAGAGGGATCAAAGTaGTTCAGAGTCTACCTTTCA +
Preference number: 4 (lower is better)
Translates to: SSHFAMCIQEWGAGRALRSEGSK*FRVYLS
Trigger: TGAAAGGTAGACTCTGAACCACTTTGATCCCTCTGA...CCTCAAGGCCCTCCCAGCACCCCATTCTTGTATACACATGGCAAAATGTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp GTCTTGAGCTCTGAAATTTTGTTCGTTCTAGATTTAACTGTGGTGCATAAGAGGGGAGTTGATAAGAGCTaGACTGGGACCAGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: VLSSEILFVLDLTVVHKRGVDKS*TGTSGG
Trigger: CCCTCCGCTGGTCCCAGTCCAGCTCTTATCAACTCC...CCTCTTATGCACCACAGTTAAATCTAGAACGAACAAAATTTCAGAGCTCAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp AAGAACAAACATGAAGGTACTCAGCACCTGGAAGGTTTGGGCCAGCTTGATCTTCAGTGGGTTTTCCTTTaGGGAGTTGATAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KNKHEGTQHLEGLGQLDLQWVFL*GVDKSW
Trigger: CCAGCTCTTATCAACTCCCCAAAGGAAAACCCACTG...AAGATCAAGCTGGCCCAAACCTTCCAGGTGCTGAGTACCTTCATGTTTGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636771.1
3UTR CAA 72 bp TGCCTGTTTGTAACGGAAAATCATGAGTGGGAACTATaGTCTTCTTTGGAGCCCCTCAGGACAACCTCATCC +
Preference number: 4 (lower is better)
Translates to: CLFVTENHEWEL*SSLEPLRTTSS
Trigger: GGATGAGGTTGTCCTGAGGGGCTCCAAAGAAGACAATAGTTCCCACTCATGATTTTCCGTTACAAACAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR CAA 72 bp AAGAACAAACATGAAGGTACTCAGCACCTGGAAGGTTaGGGCCAGCTTGATCTTATCCCCCAGCATTCTGAT +
Preference number: 4 (lower is better)
Translates to: KNKHEGTQHLEG*GQLDLIPQHSD
Trigger: ATCAGAATGCTGGGGGATAAGATCAAGCTGGCCCAAACCTTCCAGGTGCTGAGTACCTTCATGTTTGTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636771.1
CDS-3UTR TCA 90 bp ATGGGCAGATTTGGGACCTATGAATGTCTTCCCTTCATCTGGAGAGAAGTGGGCGCACCCATGTGTCTATaGCAGTCATACAAAGAAATA +
Preference number: 4 (lower is better)
Translates to: MGRFGTYECLPFIWREVGAPMCL*QSYKEI
Trigger: TATTTCTTTGTATGACTGTCATAGACACATGGGTGC...GCCCACTTCTCTCCAGATGAAGGGAAGACATTCATAGGTCCCAAATCTGCCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp CTACCCACAGAGCTAAGAACCAGTGGGTTTTCCTTTGGGGAGTTGATAAGAGCTCTCTACCTGCTGAGATaGAAGGAGTTTCTTCACATT +
Preference number: 4 (lower is better)
Translates to: LPTELRTSGFSFGELIRALYLLR*KEFLHI
Trigger: AATGTGAAGAAACTCCTTTCATCTCAGCAGGTAGAG...AGCTCTTATCAACTCCCCAAAGGAAAACCCACTGGTTCTTAGCTCTGTGGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp CGTGTCATCAGTCCTCCTCTACCTGCTGAGATGAAAGGAGTTTCTTCACATTTTTCAGGACTTTGGCCTTaGATGAAATCATTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: RVISPPLPAEMKGVSSHFSGLWP*MKSLEA
Trigger: GGCCTCCAATGATTTCATTCAAGGCCAAAGTCCTGA...AAAATGTGAAGAAACTCCTTTCATCTCAGCAGGTAGAGGAGGACTGATGACACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR GCA 90 bp ACAAGAATGGGGTGCTGGGAGGGCCTTGAGGTTAATGCCTTGGACTGTAAGATTTTGCTGGAATCTCTCTaGTCTTTCTTGAACATCCTT +
Preference number: 4 (lower is better)
Translates to: TRMGCWEGLEVNALDCKILLESL*SFLNIL
Trigger: AAGGATGTTCAAGAAAGAGCAGAGAGATTCCAGCAA...AATCTTACAGTCCAAGGCATTAACCTCAAGGCCCTCCCAGCACCCCATTCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR GCA 90 bp CTCCTAGGGCCCAGATTCTCCTGTTCCACTACTGTTAGAACTGACAGGATAGTACCAACATCTTATCCTTaGTGGAATCTCTCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: LLGPRFSCSTTVRTDRIVPTSYP*WNLSAL
Trigger: AAGAGCAGAGAGATTCCAGCAAGGATAAGATGTTGG...TACTATCCTGTCAGTTCTAACAGTAGTGGAACAGGAGAATCTGGGCCCTAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp TGGTGTTTAAGGTTTCTTCCCTATATGATATTCTACTCTTCCAGTCTAGGATTATTGGTTCCTCAGGGTTaGGGGAGCCCGGCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: WCLRFLPYMIFYSSSLGLLVPQG*GSPAVA
Trigger: AGCTACTGCCGGGCTCCCCCAACCCTGAGGAACCAA...TAATCCTAGACTGGAAGAGTAGAATATCATATAGGGAAGAAACCTTAAACACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp CAACCATACAATAAGGGCACTGCTTGTACCCAGTTCTTGGGAAGCCACAGTCATTCAGAGGGATCAAAGTaGTTCAGAGTCTACCTTTCA +
Preference number: 4 (lower is better)
Translates to: QPYNKGTACTQFLGSHSHSEGSK*FRVYLS
Trigger: TGAAAGGTAGACTCTGAACCACTTTGATCCCTCTGA...ATGACTGTGGCTTCCCAAGAACTGGGTACAAGCAGTGCCCTTATTGTATGGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp CTTCAGAGGGATCAAAGTGGTTCAGAGTCTACCTTTCATGGCACCTTTAATGCCAACTATTGTCTTCTTTaGAGCCCCTCAGGACAACCT +
Preference number: 4 (lower is better)
Translates to: LQRDQSGSESTFHGTFNANYCLL*SPSGQP
Trigger: AGGTTGTCCTGAGGGGCTCCAAAGAAGACAATAGTT...GGCATTAAAGGTGCCATGAAAGGTAGACTCTGAACCACTTTGATCCCTCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp AAGAACAAACATGAAGGTACTCAGCACCTGGAAGGTTTGGGCCAGCTTGATCTTAACTATTGTCTTCTTTaGAGCCCCTCAGGACAACCT +
Preference number: 4 (lower is better)
Translates to: KNKHEGTQHLEGLGQLDLNYCLL*SPSGQP
Trigger: AGGTTGTCCTGAGGGGCTCCAAAGAAGACAATAGTT...AAGATCAAGCTGGCCCAAACCTTCCAGGTGCTGAGTACCTTCATGTTTGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636771.1
CDS-3UTR CCA 90 bp TTTGTAACGGAAAATCATGAGTGGGAACTATTGTCTTCTTTGGAGCCCCTCAGGCAGTGGGTTTTCCTTTaGGGAGTTGATAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: FVTENHEWELLSSLEPLRQWVFL*GVDKSW
Trigger: CCAGCTCTTATCAACTCCCCAAAGGAAAACCCACTG...CCTGAGGGGCTCCAAAGAAGACAATAGTTCCCACTCATGATTTTCCGTTACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp GTCACCTACTTCAGAGGGATCAAAGTGGTTCAGAGTCTACCTTTCATGGCACCTTATGTGACATCTGAATaGGCAGATTTGGGACCTATG +
Preference number: 4 (lower is better)
Translates to: VTYFRGIKVVQSLPFMAPYVTSE*ADLGPM
Trigger: CATAGGTCCCAAATCTGCCCATTCAGATGTCACATA...AGGTGCCATGAAAGGTAGACTCTGAACCACTTTGATCCCTCTGAAGTAGGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp TTCCGGGTCCCTCCTTTCTTCAAGCACCCATGTGTCTATGACAGTCATACAAAGTATGTGACATCTGAATaGGCAGATTTGGGACCTATG +
Preference number: 4 (lower is better)
Translates to: FRVPPFFKHPCVYDSHTKYVTSE*ADLGPM
Trigger: CATAGGTCCCAAATCTGCCCATTCAGATGTCACATA...CTTTGTATGACTGTCATAGACACATGGGTGCTTGAAGAAAGGAGGGACCCGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR CAA 72 bp GCCATGTGTATACAAGAATGGGGTGCTGGGAGGGCCTaGAGGTTAATGCCTTGGACTGTAAGATTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: AMCIQEWGAGRA*RLMPWTVRFVK
Trigger: TTTTACAAATCTTACAGTCCAAGGCATTAACCTCAAGGCCCTCCCAGCACCCCATTCTTGTATACACATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp CTAGATTTAACTGTGGTGCATAAGAGGCTGCATCCTACTCTAAATATTAATACTAAGACGCCCAAGGCCTaGGGTAGCCCCAATACACAC +
Preference number: 4 (lower is better)
Translates to: LDLTVVHKRLHPTLNINTKTPKA*GSPNTH
Trigger: GTGTGTATTGGGGCTACCTCAGGCCTTGGGCGTCTT...AGTATTAATATTTAGAGTAGGATGCAGCCTCTTATGCACCACAGTTAAATCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp GAAATGCTGTGTGCGCAGGTCTGGGAACAAGTGTGCTGGTGGCAAAAATGTAAATGTAACGGAAAATCATaGGTGGGAACTATTGTCTTC +
Preference number: 4 (lower is better)
Translates to: EMLCAQVWEQVCWWQKCKCNGKS*VGTIVF
Trigger: GAAGACAATAGTTCCCACTCATGATTTTCCGTTACA...TTTACATTTTTGCCACCAGCACACTTGTTCCCAGACCTGCGCACACAGCATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp CAAATATGGATGGCAATGACCTCCTCAGCAAACAGAGATTTGGGCCTACCCTATATATTATGTGACATCTaGATGGGCAGATTTGGGACC +
Preference number: 4 (lower is better)
Translates to: QIWMAMTSSANRDLGLPYILCDI*MGRFGT
Trigger: GGTCCCAAATCTGCCCATTCAGATGTCACATAATAT...ATAGGGTAGGCCCAAATCTCTGTTTGCTGAGGAGGTCATTGCCATCCATATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR GCA 90 bp CTAGATTTAACTGTGGTGCATAAGAGGCTGCATCCTACTCTAAATATTAATACTGTCAGGTGGCTGAAATaGTGTGTGCGCAGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: LDLTVVHKRLHPTLNINTVRWLK*CVRRSG
Trigger: CCCAGACCTGCGCACACAGCATTTCAGCCACCTGAC...AGTATTAATATTTAGAGTAGGATGCAGCCTCTTATGCACCACAGTTAAATCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp GAGAATTTAGTTAATGAGTTTGGAACACCTGGAGCTTTGACTCCAAGGAGATTGAGCACCTGGAAGGTTTaGGCCAGCTTGATCTTATCC +
Preference number: 4 (lower is better)
Translates to: ENLVNEFGTPGALTPRRLSTWKV*ASLILS
Trigger: GGATAAGATCAAGCTGGCCCAAACCTTCCAGGTGCT...CAATCTCCTTGGAGTCAAAGCTCCAGGTGTTCCAAACTCATTAACTAAATTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp GTCTTGAGCTCTGAAATTTTGTTCGTTCTAGATTTAACTGTGGTGCATAAGAGGATGGAGTCACTGATGTaGCCTGACACAAGACGCCCA +
Preference number: 4 (lower is better)
Translates to: VLSSEILFVLDLTVVHKRMESLM*PDTRRP
Trigger: TGGGCGTCTTGTGTCAGGCCACATCAGTGACTCCAT...CCTCTTATGCACCACAGTTAAATCTAGAACGAACAAAATTTCAGAGCTCAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp CAGTCATCAGCAACTCTAAGACTAACCAAGGCTACTTGTCTCATTTTGCCTCCCGAACATGGAACACTGTaGTGTTTAAGGTTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: QSSATLRLTKATCLILPPEHGTL*CLRFLP
Trigger: GGGAAGAAACCTTAAACACCACAGTGTTCCATGTTC...GGGAGGCAAAATGAGACAAGTAGCCTTGGTTAGTCTTAGAGTTGCTGATGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp ATGGGCAGATTTGGGACCTATGAATGTCTTCCCTTCATCTGGAGAGAAGTGGGCACGGAAAATCATGAGTaGGAACTATTGTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: MGRFGTYECLPFIWREVGTENHE*ELLSSL
Trigger: CAAAGAAGACAATAGTTCCCACTCATGATTTTCCGT...GCCCACTTCTCTCCAGATGAAGGGAAGACATTCATAGGTCCCAAATCTGCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp TCAGCAACTCTAAGACTAACCAAGGCTACTTGTCTCATTTTGCCTCCCTGCCCCACGGAAAATCATGAGTaGGAACTATTGTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: SATLRLTKATCLILPPCPTENHE*ELLSSL
Trigger: CAAAGAAGACAATAGTTCCCACTCATGATTTTCCGT...GGGGCAGGGAGGCAAAATGAGACAAGTAGCCTTGGTTAGTCTTAGAGTTGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
3UTR CAA 72 bp ATCCCACCATATTATGTGACATCTGAATGGGCAGATTaGGGACCTATGAATGTCTTCCCTTCATCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: IPPYYVTSEWAD*GPMNVFPSSGE
Trigger: CTCTCCAGATGAAGGGAAGACATTCATAGGTCCCAAATCTGCCCATTCAGATGTCACATAATATGGTGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp GTCTTGAGCTCTGAAATTTTGTTCGTTCTAGATTTAACTGTGGTGCATAAGAGGGGGCCGGTAGGTGAGTaGAAGCAGCATAAGAACAAA +
Preference number: 4 (lower is better)
Translates to: VLSSEILFVLDLTVVHKRGPVGE*KQHKNK
Trigger: TTTGTTCTTATGCTGCTTTCACTCACCTACCGGCCC...CCTCTTATGCACCACAGTTAAATCTAGAACGAACAAAATTTCAGAGCTCAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp GAGAATTTAGTTAATGAGTTTGGAACACCTGGAGCTTTGACTCCAAGGAGATTGCAAAAATGTAAATGCTaGGCAGGGTGGGATGAAGGG +
Preference number: 4 (lower is better)
Translates to: ENLVNEFGTPGALTPRRLQKCKC*AGWDEG
Trigger: CCCTTCATCCCACCCTGCTCAGCATTTACATTTTTG...CAATCTCCTTGGAGTCAAAGCTCCAGGTGTTCCAAACTCATTAACTAAATTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp CAAATATGGATGGCAATGACCTCCTCAGCAAACAGAGATTTGGGCCTACCCTATGCACCCATGTGTCTATaGCAGTCATACAAAGAAATA +
Preference number: 4 (lower is better)
Translates to: QIWMAMTSSANRDLGLPYAPMCL*QSYKEI
Trigger: TATTTCTTTGTATGACTGTCATAGACACATGGGTGC...ATAGGGTAGGCCCAAATCTCTGTTTGCTGAGGAGGTCATTGCCATCCATATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR TCA 90 bp TTTGTAACGGAAAATCATGAGTGGGAACTATTGTCTTCTTTGGAGCCCCTCAGGTCCCACCATATTATGTaGCATCTGAATGGGCAGATT +
Preference number: 4 (lower is better)
Translates to: FVTENHEWELLSSLEPLRSHHIM*HLNGQI
Trigger: AATCTGCCCATTCAGATGTCACATAATATGGTGGGA...CCTGAGGGGCTCCAAAGAAGACAATAGTTCCCACTCATGATTTTCCGTTACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR GCA 90 bp CGTGTCATCAGTCCTCCTCTACCTGCTGAGATGAAAGGAGTTTCTTCACATTTTCCAACATCTTATCCTTaGTGGAATCTCTCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: RVISPPLPAEMKGVSSHFPTSYP*WNLSAL
Trigger: AAGAGCAGAGAGATTCCAGCAAGGATAAGATGTTGG...AAAATGTGAAGAAACTCCTTTCATCTCAGCAGGTAGAGGAGGACTGATGACACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR GCA 90 bp CGTGTCATCAGTCCTCCTCTACCTGCTGAGATGAAAGGAGTTTCTTCACATTTTGTCTGGGAACAAGTGTaGTGGTGGCAAAAATGTAAA +
Preference number: 4 (lower is better)
Translates to: RVISPPLPAEMKGVSSHFVWEQV*WWQKCK
Trigger: TTTACATTTTTGCCACCAGCACACTTGTTCCCAGAC...AAAATGTGAAGAAACTCCTTTCATCTCAGCAGGTAGAGGAGGACTGATGACACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR GCA 90 bp TTTGTAACGGAAAATCATGAGTGGGAACTATTGTCTTCTTTGGAGCCCCTCAGGGTCTGGGAACAAGTGTaGTGGTGGCAAAAATGTAAA +
Preference number: 4 (lower is better)
Translates to: FVTENHEWELLSSLEPLRVWEQV*WWQKCK
Trigger: TTTACATTTTTGCCACCAGCACACTTGTTCCCAGAC...CCTGAGGGGCTCCAAAGAAGACAATAGTTCCCACTCATGATTTTCCGTTACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR GCA 90 bp CTGAAATGCTGTGTGCGCAGGTCTGGGAACAAGTGTGCTGGTGGCAAAAATGTATTCTTAAGAGCCATCTaGATCTTAAGCAACAAAAGA +
Preference number: 4 (lower is better)
Translates to: LKCCVRRSGNKCAGGKNVFLRAI*ILSNKR
Trigger: TCTTTTGTTGCTTAAGATGCAGATGGCTCTTAAGAA...TACATTTTTGCCACCAGCACACTTGTTCCCAGACCTGCGCACACAGCATTTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR GCA 90 bp TTTTCCAACCCTATGTGCAACTGCTGCCTGTACCTTTTTGGGATCCAGGCTAGGTTCTTAAGAGCCATCTaGATCTTAAGCAACAAAAGA +
Preference number: 4 (lower is better)
Translates to: FSNPMCNCCLYLFGIQARFLRAI*ILSNKR
Trigger: TCTTTTGTTGCTTAAGATGCAGATGGCTCTTAAGAA...CCTAGCCTGGATCCCAAAAAGGTACAGGCAGCAGTTGCACATAGGGTTGGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp TGGTGTTTAAGGTTTCTTCCCTATATGATATTCTACTCTTCCAGTCTAGGATTACCTCCTCTAGCAGCATaGAGTAGAGGATCCCGACAG +
Preference number: 4 (lower is better)
Translates to: WCLRFLPYMIFYSSSLGLPPLAA*SRGSRQ
Trigger: CTGTCGGGATCCTCTACTCCATGCTGCTAGAGGAGG...TAATCCTAGACTGGAAGAGTAGAATATCATATAGGGAAGAAACCTTAAACACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp CGTGTCATCAGTCCTCCTCTACCTGCTGAGATGAAAGGAGTTTCTTCACATTTTAAGTCCAAGACCAGATaGATTCACAGCCGAATTCTA +
Preference number: 4 (lower is better)
Translates to: RVISPPLPAEMKGVSSHFKSKTR*IHSRIL
Trigger: TAGAATTCGGCTGTGAATCCATCTGGTCTTGGACTT...AAAATGTGAAGAAACTCCTTTCATCTCAGCAGGTAGAGGAGGACTGATGACACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636771.1
CDS-3UTR TCA 90 bp AATACTGTGCTGCTTTTGCCAATCAACATTCTCTCCAAAAGCACACAAGCTCACCTCTACCTGCTGAGATaGAAGGAGTTTCTTCACATT +
Preference number: 4 (lower is better)
Translates to: NTVLLLPINILSKSTQAHLYLLR*KEFLHI
Trigger: AATGTGAAGAAACTCCTTTCATCTCAGCAGGTAGAG...GTGAGCTTGTGTGCTTTTGGAGAGAATGTTGATTGGCAAAAGCAGCACAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp TTTGTAACGGAAAATCATGAGTGGGAACTATTGTCTTCTTTGGAGCCCCTCAGGCCATGTCTTGAGCTCTaGAATTTTGTTCGTTCTAGA +
Preference number: 4 (lower is better)
Translates to: FVTENHEWELLSSLEPLRPCLEL*NFVRSR
Trigger: TCTAGAACGAACAAAATTTCAGAGCTCAAGACATGG...CCTGAGGGGCTCCAAAGAAGACAATAGTTCCCACTCATGATTTTCCGTTACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR GCA 90 bp TGGTGTTTAAGGTTTCTTCCCTATATGATATTCTACTCTTCCAGTCTAGGATTACGACAGAGTTATGGATaGCGAAGATGGAGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: WCLRFLPYMIFYSSSLGLRQSYG*RRWSRC
Trigger: GCAACGGCTCCATCTTCGGCATCCATAACTCTGTCG...TAATCCTAGACTGGAAGAGTAGAATATCATATAGGGAAGAAACCTTAAACACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp TGGTGTTTAAGGTTTCTTCCCTATATGATATTCTACTCTTCCAGTCTAGGATTAATGAAGGGGAAGAGCTaGGAAAGGGCACACAATGGC +
Preference number: 4 (lower is better)
Translates to: WCLRFLPYMIFYSSSLGLMKGKS*ERAHNG
Trigger: GCCATTGTGTGCCCTTTCCCAGCTCTTCCCCTTCAT...TAATCCTAGACTGGAAGAGTAGAATATCATATAGGGAAGAAACCTTAAACACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CCA 90 bp GTGGTGCATAAGAGGCTGCATCCTACTCTAAATATTAATACTGTGCTGCTTTTGGAACATGGAACACTGTaGTGTTTAAGGTTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: VVHKRLHPTLNINTVLLLEHGTL*CLRFLP
Trigger: GGGAAGAAACCTTAAACACCACAGTGTTCCATGTTC...CAAAAGCAGCACAGTATTAATATTTAGAGTAGGATGCAGCCTCTTATGCACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp GAGAATTTAGTTAATGAGTTTGGAACACCTGGAGCTTTGACTCCAAGGAGATTGTGTAACGGAAAATCATaGGTGGGAACTATTGTCTTC +
Preference number: 4 (lower is better)
Translates to: ENLVNEFGTPGALTPRRLCNGKS*VGTIVF
Trigger: GAAGACAATAGTTCCCACTCATGATTTTCCGTTACA...CAATCTCCTTGGAGTCAAAGCTCCAGGTGTTCCAAACTCATTAACTAAATTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR TCA 90 bp CTAGATTTAACTGTGGTGCATAAGAGGCTGCATCCTACTCTAAATATTAATACTTCAGGACTTTGGCCTTaGATGAAATCATTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: LDLTVVHKRLHPTLNINTSGLWP*MKSLEA
Trigger: GGCCTCCAATGATTTCATTCAAGGCCAAAGTCCTGA...AGTATTAATATTTAGAGTAGGATGCAGCCTCTTATGCACCACAGTTAAATCTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR GCA 90 bp GTCTTGAGCTCTGAAATTTTGTTCGTTCTAGATTTAACTGTGGTGCATAAGAGGGTCTGGGAACAAGTGTaGTGGTGGCAAAAATGTAAA +
Preference number: 4 (lower is better)
Translates to: VLSSEILFVLDLTVVHKRVWEQV*WWQKCK
Trigger: TTTACATTTTTGCCACCAGCACACTTGTTCCCAGAC...CCTCTTATGCACCACAGTTAAATCTAGAACGAACAAAATTTCAGAGCTCAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CCA 90 bp CTAGATTTAACTGTGGTGCATAAGAGGCTGCATCCTACTCTAAATATTAATACTCAGCAAACAGAGATTTaGGCCTACCCTATTAGGCTC +
Preference number: 4 (lower is better)
Translates to: LDLTVVHKRLHPTLNINTQQTEI*AYPIRL
Trigger: GAGCCTAATAGGGTAGGCCCAAATCTCTGTTTGCTG...AGTATTAATATTTAGAGTAGGATGCAGCCTCTTATGCACCACAGTTAAATCTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS GCA 90 bp CGCGCGGTGCCGCGGGTCTCTACCGTAGGCGTGGGCTCGGGTTCGTaGACCCGCTCGGACTCGAACTCCAGCTCCGGCAGGGGTGCGGGG +
Preference number: 5 (lower is better)
Translates to: RAVPRVSTVGVGSGS*TRSDSNSSSGRGAG
Trigger: CCCCGCACCCCTGCCGGAGCTGGAGTTCGAGTCCGAGCGGGTGCACGAACCCGAGCCCACGCCTACGGTAGAGACCCGCGGCACCGCGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587091.6
CDS CCA 90 bp GTGGCAGCGAACACCACCACCCAGCCGAAGCCACCTTCGGGAGGCTaGAAGCCGCGCGCGGTGCCGCGGGTCTCTACCGTAGGCGTGGGC +
Preference number: 5 (lower is better)
Translates to: VAANTTTQPKPPSGG*KPRAVPRVSTVGVG
Trigger: GCCCACGCCTACGGTAGAGACCCGCGGCACCGCGCGCGGCTTCCAGCCTCCCGAAGGTGGCTTCGGCTGGGTGGTGGTGTTCGCTGCCAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587091.6
CDS GCA 90 bp AGCCGCTTTGTGGCTGGTACTTGTTTCTGCTGCTGCAGCTGCTGCTaGTCGGAGGGCTGCTGCTGCCGCTGCCGCTGCCTCCTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: SRFVAGTCFCCCSCC*SEGCCCRCRCLLLQ
Trigger: CTGGAGGAGGAGGCAGCGGCAGCGGCAGCAGCAGCCCTCCGAGCAGCAGCAGCTGCAGCAGCAGAAACAAGTACCAGCCACAAAGCGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587091.6
CDS GCA 90 bp AGGAGCCGCTTTGTGGCTGGTACTTGTTTCTGCTGCTGCAGCTGCTaGTGCTCGGAGGGCTGCTGCTGCCGCTGCCGCTGCCTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: RSRFVAGTCFCCCSC*CSEGCCCRCRCLLL
Trigger: GAGGAGGAGGCAGCGGCAGCGGCAGCAGCAGCCCTCCGAGCAGCAGCAGCTGCAGCAGCAGAAACAAGTACCAGCCACAAAGCGGCTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587091.6
CDS GCA 90 bp CAGAGGAGCCGCTTTGTGGCTGGTACTTGTTTCTGCTGCTGCAGCTaGTGCTGCTCGGAGGGCTGCTGCTGCCGCTGCCGCTGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: QRSRFVAGTCFCCCS*CCSEGCCCRCRCLL
Trigger: GAGGAGGCAGCGGCAGCGGCAGCAGCAGCCCTCCGAGCAGCAGCAGCTGCAGCAGCAGAAACAAGTACCAGCCACAAAGCGGCTCCTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587091.6
CDS GCA 90 bp TTGGGCCAGAGGAGCCGCTTTGTGGCTGGTACTTGTTTCTGCTGCTaGAGCTGCTGCTGCTCGGAGGGCTGCTGCTGCCGCTGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: LGQRSRFVAGTCFCC*SCCCSEGCCCRCRC
Trigger: GCAGCGGCAGCGGCAGCAGCAGCCCTCCGAGCAGCAGCAGCTGCAGCAGCAGAAACAAGTACCAGCCACAAAGCGGCTCCTCTGGCCCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587091.6
CDS GCA 90 bp TGCTTGGGCCAGAGGAGCCGCTTTGTGGCTGGTACTTGTTTCTGCTaGTGCAGCTGCTGCTGCTCGGAGGGCTGCTGCTGCCGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: CLGQRSRFVAGTCFC*CSCCCSEGCCCRCR
Trigger: GCGGCAGCGGCAGCAGCAGCCCTCCGAGCAGCAGCAGCTGCAGCAGCAGAAACAAGTACCAGCCACAAAGCGGCTCCTCTGGCCCAAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587091.6
CDS GCA 90 bp GGCTGCTTGGGCCAGAGGAGCCGCTTTGTGGCTGGTACTTGTTTCTaGTGCTGCAGCTGCTGCTGCTCGGAGGGCTGCTGCTGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: GCLGQRSRFVAGTCF*CCSCCCSEGCCCRC
Trigger: GCAGCGGCAGCAGCAGCCCTCCGAGCAGCAGCAGCTGCAGCAGCAGAAACAAGTACCAGCCACAAAGCGGCTCCTCTGGCCCAAGCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587091.6
CDS-3UTR CAA 90 bp GGAGTGGACTGGGACAAGGTGAGGCTGATTGGCCCAAGTTCCGGGTCCCTCCTTGCAGACACCACACCATaGGCCAGACCCAGGCGGCGT +
Preference number: 5 (lower is better)
Translates to: GVDWDKVRLIGPSSGSLLADTTP*ARPRRR
Trigger: ACGCCGCCTGGGTCTGGCCAATGGTGTGGTGTCTGC...AAGGAGGGACCCGGAACTTGGGCCAATCAGCCTCACCTTGTCCCAGTCCACTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CAA 90 bp GACAAGGTGAGGCTGATTGGCCCAAGTTCCGGGTCCCTCCTTTCTTCAAGCACCGGGGCCCAGCAATCATaGGCAGGGCCATCATGCCCA +
Preference number: 5 (lower is better)
Translates to: DKVRLIGPSSGSLLSSSTGAQQS*AGPSCP
Trigger: TGGGCATGATGGCCCTGCCAATGATTGCTGGGCCCC...GGTGCTTGAAGAAAGGAGGGACCCGGAACTTGGGCCAATCAGCCTCACCTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp GACAAGGTGAGGCTGATTGGCCCAAGTTCCGGGTCCCTCCTTTCTTCAAGCACCCAGACCCAGGCGGCGTaGAAAGTAGTGGCCCAGGAT +
Preference number: 5 (lower is better)
Translates to: DKVRLIGPSSGSLLSSSTQTQAA*KVVAQD
Trigger: ATCCTGGGCCACTACTTTCAACGCCGCCTGGGTCTG...GGTGCTTGAAGAAAGGAGGGACCCGGAACTTGGGCCAATCAGCCTCACCTTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CAA 90 bp GAAATGCTGTGTGCGCAGGTCTGGGAACAAGTGTGCTGGTGGCAAAAATGTAAACTCGCTCGCCTGGCTTaGCAGCGCCATCGCGGCGGG +
Preference number: 5 (lower is better)
Translates to: EMLCAQVWEQVCWWQKCKLARLA*QRHRGG
Trigger: CCCGCCGCGATGGCGCTGCAAAGCCAGGCGAGCGAG...TTTACATTTTTGCCACCAGCACACTTGTTCCCAGACCTGCGCACACAGCATTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587091.6
CDS-3UTR CAA 90 bp CCCTCTAAGCAAAGTGGCCTAGGATGCCCAGCATGGGAGACACATTGGGTGGTACAGACCCAGGCGGCGTaGAAAGTAGTGGCCCAGGAT +
Preference number: 5 (lower is better)
Translates to: PSKQSGLGCPAWETHWVVQTQAA*KVVAQD
Trigger: ATCCTGGGCCACTACTTTCAACGCCGCCTGGGTCTG...TACCACCCAATGTGTCTCCCATGCTGGGCATCCTAGGCCACTTTGCTTAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp TTCCGGGTCCCTCCTTTCTTCAAGCACCCATGTGTCTATGACAGTCATACAAAGCCTGCCAGGGCCCCTTaGCTTCCTCGCTCGCCTGGC +
Preference number: 5 (lower is better)
Translates to: FRVPPFFKHPCVYDSHTKPARAP*LPRSPG
Trigger: GCCAGGCGAGCGAGGAAGCAAAGGGGCCCTGGCAGG...CTTTGTATGACTGTCATAGACACATGGGTGCTTGAAGAAAGGAGGGACCCGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587091.6
CDS-3UTR CAA 90 bp GATTGGCCCAAGTTCCGGGTCCCTCCTTTCTTCAAGCACCCATGTGTCTATGACCAGACCCAGGCGGCGTaGAAAGTAGTGGCCCAGGAT +
Preference number: 5 (lower is better)
Translates to: DWPKFRVPPFFKHPCVYDQTQAA*KVVAQD
Trigger: ATCCTGGGCCACTACTTTCAACGCCGCCTGGGTCTG...GTCATAGACACATGGGTGCTTGAAGAAAGGAGGGACCCGGAACTTGGGCCAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CAA 90 bp TGCTGTGTGCGCAGGTCTGGGAACAAGTGTGCTGGTGGCAAAAATGTAAATGCTGCAGACACCACACCATaGGCCAGACCCAGGCGGCGT +
Preference number: 5 (lower is better)
Translates to: CCVRRSGNKCAGGKNVNAADTTP*ARPRRR
Trigger: ACGCCGCCTGGGTCTGGCCAATGGTGTGGTGTCTGC...AGCATTTACATTTTTGCCACCAGCACACTTGTTCCCAGACCTGCGCACACAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CAA 90 bp GGGCTCCTAGGGCCCAGATTCTCCTGTTCCACTACTGTTAGAACTGACAGGATAGTGCGGACACCTCTCTaGCTTGGGGTGTCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: GLLGPRFSCSTTVRTDRIVRTPL*LGVSWE
Trigger: CTCCCAGGACACCCCAAGCAAGAGAGGTGTCCGCAC...TATCCTGTCAGTTCTAACAGTAGTGGAACAGGAGAATCTGGGCCCTAGGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp CCTCCCGCCATGGCAGCTCGTGTCATCAGTCCTCCTCTACCTGCTGAGATGAAAGGTGGCAAGTTACTGTaGGCTCCAAGTGACAGCCAG +
Preference number: 5 (lower is better)
Translates to: PPAMAARVISPPLPAEMKGGKLL*APSDSQ
Trigger: CTGGCTGTCACTTGGAGCCAACAGTAACTTGCCACC...TTTCATCTCAGCAGGTAGAGGAGGACTGATGACACGAGCTGCCATGGCGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp CAGTGGGTTTTCCTTTGGGGAGTTGATAAGAGCTGGACTGGGACCAGCGGAGGGGGTGGCAAGTTACTGTaGGCTCCAAGTGACAGCCAG +
Preference number: 5 (lower is better)
Translates to: QWVFLWGVDKSWTGTSGGGGKLL*APSDSQ
Trigger: CTGGCTGTCACTTGGAGCCAACAGTAACTTGCCACC...CCCTCCGCTGGTCCCAGTCCAGCTCTTATCAACTCCCCAAAGGAAAACCCACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp CCTCCCGCCATGGCAGCTCGTGTCATCAGTCCTCCTCTACCTGCTGAGATGAAACAGCACCTGGAAGGTTaGGGCCAGCTTGATCTTATC +
Preference number: 5 (lower is better)
Translates to: PPAMAARVISPPLPAEMKQHLEG*GQLDLI
Trigger: GATAAGATCAAGCTGGCCCAAACCTTCCAGGTGCTG...TTTCATCTCAGCAGGTAGAGGAGGACTGATGACACGAGCTGCCATGGCGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CAA 90 bp GGAGTGGACTGGGACAAGGTGAGGCTGATTGGCCCAAGTTCCGGGTCCCTCCTTGACACAGTAGCACCTTaGGCAGTTGATTATAGTGGG +
Preference number: 5 (lower is better)
Translates to: GVDWDKVRLIGPSSGSLLDTVAP*AVDYSG
Trigger: CCCACTATAATCAACTGCCAAAGGTGCTACTGTGTC...AAGGAGGGACCCGGAACTTGGGCCAATCAGCCTCACCTTGTCCCAGTCCACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CAA 90 bp GGAGTGGACTGGGACAAGGTGAGGCTGATTGGCCCAAGTTCCGGGTCCCTCCTTACTAACCAAGGCTACTaGTCTCATTTTGCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: GVDWDKVRLIGPSSGSLLTNQGY*SHFASL
Trigger: CAGGGAGGCAAAATGAGACAAGTAGCCTTGGTTAGT...AAGGAGGGACCCGGAACTTGGGCCAATCAGCCTCACCTTGTCCCAGTCCACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CAA 90 bp GGGTGGTTCCCAAGCTTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGAAAATTTGGTGCTGGGAGGGCCTaGAGGTTAATGCCTTGGACT +
Preference number: 5 (lower is better)
Translates to: GWFPSFPRSWEEKGPGKFGAGRA*RLMPWT
Trigger: AGTCCAAGGCATTAACCTCAAGGCCCTCCCAGCACC...AAATTTTCCAGGGCCTTTCTCCTCCCAGGATCTGGGAAAGCTTGGGAACCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CAA 90 bp GATTGGCCCAAGTTCCGGGTCCCTCCTTTCTTCAAGCACCCATGTGTCTATGACGGTGCTGGGAGGGCCTaGAGGTTAATGCCTTGGACT +
Preference number: 5 (lower is better)
Translates to: DWPKFRVPPFFKHPCVYDGAGRA*RLMPWT
Trigger: AGTCCAAGGCATTAACCTCAAGGCCCTCCCAGCACC...GTCATAGACACATGGGTGCTTGAAGAAAGGAGGGACCCGGAACTTGGGCCAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CAA 90 bp GGAGACACATTGGGTGGTAAAGGCTGGGATGGCTTCCCCTTCCCAAAAGAAATTGGGGCCCAGCAATCATaGGCAGGGCCATCATGCCCA +
Preference number: 5 (lower is better)
Translates to: GDTLGGKGWDGFPFPKEIGAQQS*AGPSCP
Trigger: TGGGCATGATGGCCCTGCCAATGATTGCTGGGCCCC...AATTTCTTTTGGGAAGGGGAAGCCATCCCAGCCTTTACCACCCAATGTGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp TTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGAAAATTTAAAAGCATTCTGGGGGTGCGGACACCTCTCTaGCTTGGGGTGTCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: FPRSWEEKGPGKFKSILGVRTPL*LGVSWE
Trigger: CTCCCAGGACACCCCAAGCAAGAGAGGTGTCCGCAC...CCCCAGAATGCTTTTAAATTTTCCAGGGCCTTTCTCCTCCCAGGATCTGGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CAA 90 bp GATTGGCCCAAGTTCCGGGTCCCTCCTTTCTTCAAGCACCCATGTGTCTATGACGATGCGGTAAGTGCGTaGGCGGAACACTCGCATGTT +
Preference number: 5 (lower is better)
Translates to: DWPKFRVPPFFKHPCVYDDAVSA*AEHSHV
Trigger: AACATGCGAGTGTTCCGCCAACGCACTTACCGCATC...GTCATAGACACATGGGTGCTTGAAGAAAGGAGGGACCCGGAACTTGGGCCAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CAA 90 bp GGGTGGTTCCCAAGCTTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGAAAATTTGATGCGGTAAGTGCGTaGGCGGAACACTCGCATGTT +
Preference number: 5 (lower is better)
Translates to: GWFPSFPRSWEEKGPGKFDAVSA*AEHSHV
Trigger: AACATGCGAGTGTTCCGCCAACGCACTTACCGCATC...AAATTTTCCAGGGCCTTTCTCCTCCCAGGATCTGGGAAAGCTTGGGAACCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CAA 90 bp GTCACCTACTTCAGAGGGATCAAAGTGGTTCAGAGTCTACCTTTCATGGCACCTCCGAAGATGGAGCCGTaGCACCAGGTGGCAGCGAAC +
Preference number: 5 (lower is better)
Translates to: VTYFRGIKVVQSLPFMAPPKMEP*HQVAAN
Trigger: GTTCGCTGCCACCTGGTGCAACGGCTCCATCTTCGG...AGGTGCCATGAAAGGTAGACTCTGAACCACTTTGATCCCTCTGAAGTAGGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp CCCCAGAGCTTAGAAAGTATATGGAGAGGTTCCAAAGGCCAGGGGTGGTTCCCATCCGACCCATGCTGCTaGGAACTCCACTTGGCGATT +
Preference number: 5 (lower is better)
Translates to: PQSLESIWRGSKGQGWFPSDPCC*ELHLAI
Trigger: AATCGCCAAGTGGAGTTCCAAGCAGCATGGGTCGGA...TGGGAACCACCCCTGGCCTTTGGAACCTCTCCATATACTTTCTAAGCTCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587091.6
CDS-3UTR CAA 90 bp TTTTGCCATGTGTATACAAGAATGGGGTGCTGGGAGGGCCTTGAGGTTAATGCCCCTGTGAGGCCTGCATaGGGCCCACCAGCTCAAATG +
Preference number: 5 (lower is better)
Translates to: FCHVYTRMGCWEGLEVNAPVRPA*GPPAQM
Trigger: CATTTGAGCTGGTGGGCCCAATGCAGGCCTCACAGG...GGCATTAACCTCAAGGCCCTCCCAGCACCCCATTCTTGTATACACATGGCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp CAGTGGGTTTTCCTTTGGGGAGTTGATAAGAGCTGGACTGGGACCAGCGGAGGGGCTGCCTGTACCTTTTaGGGATCCAGGCTAGGAATT +
Preference number: 5 (lower is better)
Translates to: QWVFLWGVDKSWTGTSGGAACTF*GSRLGI
Trigger: AATTCCTAGCCTGGATCCCAAAAAGGTACAGGCAGC...CCCTCCGCTGGTCCCAGTCCAGCTCTTATCAACTCCCCAAAGGAAAACCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp GTTTGGAACACCTGGAGCTTTGACTCCAAGGAGATTGTCAGGTGGCTGAAATGCCCACCCTCTGGTGACTaGGTGAGAGTGAGGTGGGGA +
Preference number: 5 (lower is better)
Translates to: VWNTWSFDSKEIVRWLKCPPSGD*VRVRWG
Trigger: TCCCCACCTCACTCTCACCAAGTCACCAGAGGGTGG...GCATTTCAGCCACCTGACAATCTCCTTGGAGTCAAAGCTCCAGGTGTTCCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp GCCATGGCAGCTCGTGTCATCAGTCCTCCTCTACCTGCTGAGATGAAAGGAGTTCAGCACCTGGAAGGTTaGGGCCAGCTTGATCTTATC +
Preference number: 5 (lower is better)
Translates to: AMAARVISPPLPAEMKGVQHLEG*GQLDLI
Trigger: GATAAGATCAAGCTGGCCCAAACCTTCCAGGTGCTG...AACTCCTTTCATCTCAGCAGGTAGAGGAGGACTGATGACACGAGCTGCCATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CAA 90 bp TGCTGTGTGCGCAGGTCTGGGAACAAGTGTGCTGGTGGCAAAAATGTAAATGCTGCTACTTGTCTCATTTaGCCTCCCTGCCCCTCCACC +
Preference number: 5 (lower is better)
Translates to: CCVRRSGNKCAGGKNVNAATCLI*PPCPST
Trigger: GGTGGAGGGGCAGGGAGGCAAAATGAGACAAGTAGC...AGCATTTACATTTTTGCCACCAGCACACTTGTTCCCAGACCTGCGCACACAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CAA 90 bp AAAGGGCACACAATGGCAAGAAAGGCATTAGATTGGTTCCTCAGGGTTGGGGGAGCTACTTGTCTCATTTaGCCTCCCTGCCCCTCCACC +
Preference number: 5 (lower is better)
Translates to: KGHTMARKALDWFLRVGGATCLI*PPCPST
Trigger: GGTGGAGGGGCAGGGAGGCAAAATGAGACAAGTAGC...TCCCCCAACCCTGAGGAACCAATCTAATGCCTTTCTTGCCATTGTGTGCCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CAA 90 bp AGCAGCATAAGAACAAACATGAAGGTACTCAGCACCTGGAAGGTTTGGGCCAGCGGTGCTGGGAGGGCCTaGAGGTTAATGCCTTGGACT +
Preference number: 5 (lower is better)
Translates to: SSIRTNMKVLSTWKVWASGAGRA*RLMPWT
Trigger: AGTCCAAGGCATTAACCTCAAGGCCCTCCCAGCACC...GCTGGCCCAAACCTTCCAGGTGCTGAGTACCTTCATGTTTGTTCTTATGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636771.1
CDS-3UTR CAA 90 bp GGGCTCCTAGGGCCCAGATTCTCCTGTTCCACTACTGTTAGAACTGACAGGATAGCCAGAGGAGCCGCTTaGTGGCTGGTACTTGTTTCT +
Preference number: 5 (lower is better)
Translates to: GLLGPRFSCSTTVRTDRIARGAA*WLVLVS
Trigger: AGAAACAAGTACCAGCCACAAAGCGGCTCCTCTGGC...TATCCTGTCAGTTCTAACAGTAGTGGAACAGGAGAATCTGGGCCCTAGGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587091.6
CDS-3UTR CAA 90 bp CAACCATACAATAAGGGCACTGCTTGTACCCAGTTCTTGGGAAGCCACAGTCATCCTGTGAGGCCTGCATaGGGCCCACCAGCTCAAATG +
Preference number: 5 (lower is better)
Translates to: QPYNKGTACTQFLGSHSHPVRPA*GPPAQM
Trigger: CATTTGAGCTGGTGGGCCCAATGCAGGCCTCACAGG...ATGACTGTGGCTTCCCAAGAACTGGGTACAAGCAGTGCCCTTATTGTATGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp GGGTGGTTCCCAAGCTTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGAAAATTTAGCATGGGAGACACATaGGGTGGTAAAGGCTGGGAT +
Preference number: 5 (lower is better)
Translates to: GWFPSFPRSWEEKGPGKFSMGDT*GGKGWD
Trigger: ATCCCAGCCTTTACCACCCAATGTGTCTCCCATGCT...AAATTTTCCAGGGCCTTTCTCCTCCCAGGATCTGGGAAAGCTTGGGAACCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp GGGCTCAGGACTTTGGCCTTGAATGAAATCATTGGAGGCCAACCATGCCCCAGCTCTTCAGTAAGACTGTaGCCAGAGCCTGGGCATAAG +
Preference number: 5 (lower is better)
Translates to: GLRTLALNEIIGGQPCPSSSVRL*PEPGHK
Trigger: CTTATGCCCAGGCTCTGGCAACAGTCTTACTGAAGA...GCTGGGGCATGGTTGGCCTCCAATGATTTCATTCAAGGCCAAAGTCCTGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp GACAAGGTGAGGCTGATTGGCCCAAGTTCCGGGTCCCTCCTTTCTTCAAGCACCCTCAGGACTTTGGCCTaGAATGAAATCATTGGAGGC +
Preference number: 5 (lower is better)
Translates to: DKVRLIGPSSGSLLSSSTLRTLA*NEIIGG
Trigger: GCCTCCAATGATTTCATTCAAGGCCAAAGTCCTGAG...GGTGCTTGAAGAAAGGAGGGACCCGGAACTTGGGCCAATCAGCCTCACCTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp AATGACCTCCTCAGCAAACAGAGATTTGGGCCTACCCTATTAGGCTCCTGGGGAAGCACCCAGGTCTCCTaGATTTCTGAGAACTCCTCC +
Preference number: 5 (lower is better)
Translates to: NDLLSKQRFGPTLLGSWGSTQVS*ISENSS
Trigger: GGAGGAGTTCTCAGAAATCAAGGAGACCTGGGTGCT...TCCCCAGGAGCCTAATAGGGTAGGCCCAAATCTCTGTTTGCTGAGGAGGTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CAA 90 bp CTGATTGGCCCAAGTTCCGGGTCCCTCCTTTCTTCAAGCACCCATGTGTCTATGAAGAAAGGCATTAGATaGGTTCCTCAGGGTTGGGGG +
Preference number: 5 (lower is better)
Translates to: LIGPSSGSLLSSSTHVSMKKGIR*VPQGWG
Trigger: CCCCCAACCCTGAGGAACCAATCTAATGCCTTTCTT...CATAGACACATGGGTGCTTGAAGAAAGGAGGGACCCGGAACTTGGGCCAATCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CAA 90 bp GGCCAGGGGTGGTTCCCAAGCTTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGACTTGAGGTTAATGCCTaGGACTGTAAGATTTGTAAA +
Preference number: 5 (lower is better)
Translates to: GQGWFPSFPRSWEEKGPGLEVNA*DCKICK
Trigger: TTTACAAATCTTACAGTCCAAGGCATTAACCTCAAG...TCCAGGGCCTTTCTCCTCCCAGGATCTGGGAAAGCTTGGGAACCACCCCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CAA 90 bp GATTGGCCCAAGTTCCGGGTCCCTCCTTTCTTCAAGCACCCATGTGTCTATGACGCTGCCTGTACCTTTTaGGGATCCAGGCTAGGAATT +
Preference number: 5 (lower is better)
Translates to: DWPKFRVPPFFKHPCVYDAACTF*GSRLGI
Trigger: AATTCCTAGCCTGGATCCCAAAAAGGTACAGGCAGC...GTCATAGACACATGGGTGCTTGAAGAAAGGAGGGACCCGGAACTTGGGCCAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp GGGTGGTTCCCAAGCTTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGAAAATTTGAACTATTGTCTTCTTaGGAGCCCCTCAGGACAACC +
Preference number: 5 (lower is better)
Translates to: GWFPSFPRSWEEKGPGKFELLSS*EPLRTT
Trigger: GGTTGTCCTGAGGGGCTCCAAAGAAGACAATAGTTC...AAATTTTCCAGGGCCTTTCTCCTCCCAGGATCTGGGAAAGCTTGGGAACCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp GGGCTCAGGACTTTGGCCTTGAATGAAATCATTGGAGGCCAACCATGCCCCAGCCTCAGGACTTTGGCCTaGAATGAAATCATTGGAGGC +
Preference number: 5 (lower is better)
Translates to: GLRTLALNEIIGGQPCPSLRTLA*NEIIGG
Trigger: GCCTCCAATGATTTCATTCAAGGCCAAAGTCCTGAG...GCTGGGGCATGGTTGGCCTCCAATGATTTCATTCAAGGCCAAAGTCCTGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp AATGACCTCCTCAGCAAACAGAGATTTGGGCCTACCCTATTAGGCTCCTGGGGAAAGGTTTGGGCCAGCTaGATCTTATCCCCCAGCATT +
Preference number: 5 (lower is better)
Translates to: NDLLSKQRFGPTLLGSWGKVWAS*ILSPSI
Trigger: AATGCTGGGGGATAAGATCAAGCTGGCCCAAACCTT...TCCCCAGGAGCCTAATAGGGTAGGCCCAAATCTCTGTTTGCTGAGGAGGTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CAA 90 bp GAAATGCTGTGTGCGCAGGTCTGGGAACAAGTGTGCTGGTGGCAAAAATGTAAAGATGCGGTAAGTGCGTaGGCGGAACACTCGCATGTT +
Preference number: 5 (lower is better)
Translates to: EMLCAQVWEQVCWWQKCKDAVSA*AEHSHV
Trigger: AACATGCGAGTGTTCCGCCAACGCACTTACCGCATC...TTTACATTTTTGCCACCAGCACACTTGTTCCCAGACCTGCGCACACAGCATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CAA 90 bp ACCAACCATACAATAAGGGCACTGCTTGTACCCAGTTCTTGGGAAGCCACAGTCAGCACCCAGGTCTCCTaGATTTCTGAGAACTCCTCC +
Preference number: 5 (lower is better)
Translates to: TNHTIRALLVPSSWEATVSTQVS*ISENSS
Trigger: GGAGGAGTTCTCAGAAATCAAGGAGACCTGGGTGCT...GACTGTGGCTTCCCAAGAACTGGGTACAAGCAGTGCCCTTATTGTATGGTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CAA 90 bp GGCATAAGGAGGCATCAGTCACCTACTTCAGAGGGATCAAAGTGGTTCAGAGTCAGCACCCAGGTCTCCTaGATTTCTGAGAACTCCTCC +
Preference number: 5 (lower is better)
Translates to: GIRRHQSPTSEGSKWFRVSTQVS*ISENSS
Trigger: GGAGGAGTTCTCAGAAATCAAGGAGACCTGGGTGCT...GACTCTGAACCACTTTGATCCCTCTGAAGTAGGTGACTGATGCCTCCTTATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp CTGAAATGCTGTGTGCGCAGGTCTGGGAACAAGTGTGCTGGTGGCAAAAATGTACTTTGTGGCTGGTACTaGTTTCTGCTGCTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: LKCCVRRSGNKCAGGKNVLCGWY*FLLLQL
Trigger: CAGCTGCAGCAGCAGAAACAAGTACCAGCCACAAAG...TACATTTTTGCCACCAGCACACTTGTTCCCAGACCTGCGCACACAGCATTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587091.6
CDS-3UTR CAA 90 bp ATGAGTGGGACTGATGCTAGTGTTAGGAGTGGACTGGGACAAGGTGAGGCTGATTCTTCAGTAAGACTGTaGCCAGAGCCTGGGCATAAG +
Preference number: 5 (lower is better)
Translates to: MSGTDASVRSGLGQGEADSSVRL*PEPGHK
Trigger: CTTATGCCCAGGCTCTGGCAACAGTCTTACTGAAGA...ATCAGCCTCACCTTGTCCCAGTCCACTCCTAACACTAGCATCAGTCCCACTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp TTGTTGCTCCAGTATTTTCAGTGGTCTCTCCTGGGAGTTACAGGGCTCCTAGGGGAACTATTGTCTTCTTaGGAGCCCCTCAGGACAACC +
Preference number: 5 (lower is better)
Translates to: LLLQYFQWSLLGVTGLLGELLSS*EPLRTT
Trigger: GGTTGTCCTGAGGGGCTCCAAAGAAGACAATAGTTC...CCCTAGGAGCCCTGTAACTCCCAGGAGAGACCACTGAAAATACTGGAGCAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp CCCCAGAGCTTAGAAAGTATATGGAGAGGTTCCAAAGGCCAGGGGTGGTTCCCAATGGAAGCAGGGGCATaGTTGCTCCAGTATTTTCAG +
Preference number: 5 (lower is better)
Translates to: PQSLESIWRGSKGQGWFPMEAGA*LLQYFQ
Trigger: CTGAAAATACTGGAGCAACAATGCCCCTGCTTCCAT...TGGGAACCACCCCTGGCCTTTGGAACCTCTCCATATACTTTCTAAGCTCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp TTTGTAACGGAAAATCATGAGTGGGAACTATTGTCTTCTTTGGAGCCCCTCAGGCCACCCTCTGGTGACTaGGTGAGAGTGAGGTGGGGA +
Preference number: 5 (lower is better)
Translates to: FVTENHEWELLSSLEPLRPPSGD*VRVRWG
Trigger: TCCCCACCTCACTCTCACCAAGTCACCAGAGGGTGG...CCTGAGGGGCTCCAAAGAAGACAATAGTTCCCACTCATGATTTTCCGTTACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp TTTTGCCATGTGTATACAAGAATGGGGTGCTGGGAGGGCCTTGAGGTTAATGCCAAGGTTTGGGCCAGCTaGATCTTATCCCCCAGCATT +
Preference number: 5 (lower is better)
Translates to: FCHVYTRMGCWEGLEVNAKVWAS*ILSPSI
Trigger: AATGCTGGGGGATAAGATCAAGCTGGCCCAAACCTT...GGCATTAACCTCAAGGCCCTCCCAGCACCCCATTCTTGTATACACATGGCAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CAA 90 bp GTTTGGAACACCTGGAGCTTTGACTCCAAGGAGATTGTCAGGTGGCTGAAATGCAAGGTTTGGGCCAGCTaGATCTTATCCCCCAGCATT +
Preference number: 5 (lower is better)
Translates to: VWNTWSFDSKEIVRWLKCKVWAS*ILSPSI
Trigger: AATGCTGGGGGATAAGATCAAGCTGGCCCAAACCTT...GCATTTCAGCCACCTGACAATCTCCTTGGAGTCAAAGCTCCAGGTGTTCCAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CAA 90 bp TTGTTGCTCCAGTATTTTCAGTGGTCTCTCCTGGGAGTTACAGGGCTCCTAGGGGCCAACATCTTATCCTaGCTGGAATCTCTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: LLLQYFQWSLLGVTGLLGANILS*LESLCS
Trigger: AGAGCAGAGAGATTCCAGCAAGGATAAGATGTTGGC...CCCTAGGAGCCCTGTAACTCCCAGGAGAGACCACTGAAAATACTGGAGCAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp TCTTCACATTTTGCCATGTGTATACAAGAATGGGGTGCTGGGAGGGCCTTGAGGAAGAAAGGCATTAGATaGGTTCCTCAGGGTTGGGGG +
Preference number: 5 (lower is better)
Translates to: SSHFAMCIQEWGAGRALRKKGIR*VPQGWG
Trigger: CCCCCAACCCTGAGGAACCAATCTAATGCCTTTCTT...CCTCAAGGCCCTCCCAGCACCCCATTCTTGTATACACATGGCAAAATGTGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CAA 90 bp GAAATGCTGTGTGCGCAGGTCTGGGAACAAGTGTGCTGGTGGCAAAAATGTAAAAGCATGGGAGACACATaGGGTGGTAAAGGCTGGGAT +
Preference number: 5 (lower is better)
Translates to: EMLCAQVWEQVCWWQKCKSMGDT*GGKGWD
Trigger: ATCCCAGCCTTTACCACCCAATGTGTCTCCCATGCT...TTTACATTTTTGCCACCAGCACACTTGTTCCCAGACCTGCGCACACAGCATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp AAAGGGCACACAATGGCAAGAAAGGCATTAGATTGGTTCCTCAGGGTTGGGGGACATGAGTGGGAACTATaGTCTTCTTTGGAGCCCCTC +
Preference number: 5 (lower is better)
Translates to: KGHTMARKALDWFLRVGGHEWEL*SSLEPL
Trigger: GAGGGGCTCCAAAGAAGACAATAGTTCCCACTCATG...TCCCCCAACCCTGAGGAACCAATCTAATGCCTTTCTTGCCATTGTGTGCCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636771.1
CDS-3UTR CAA 90 bp TTTTGCCATGTGTATACAAGAATGGGGTGCTGGGAGGGCCTTGAGGTTAATGCCGAAGCAGGGGCATTGTaGCTCCAGTATTTTCAGTGG +
Preference number: 5 (lower is better)
Translates to: FCHVYTRMGCWEGLEVNAEAGAL*LQYFQW
Trigger: CCACTGAAAATACTGGAGCAACAATGCCCCTGCTTC...GGCATTAACCTCAAGGCCCTCCCAGCACCCCATTCTTGTATACACATGGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp AAATGCAATGGGGGCCATGATGGTGATGAAGAAGCCATCGCAAAGGCCCAGGAAATGGAAGCAGGGGCATaGTTGCTCCAGTATTTTCAG +
Preference number: 5 (lower is better)
Translates to: KCNGGHDGDEEAIAKAQEMEAGA*LLQYFQ
Trigger: CTGAAAATACTGGAGCAACAATGCCCCTGCTTCCAT...TTCCTGGGCCTTTGCGATGGCTTCTTCATCACCATCATGGCCCCCATTGCATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636771.1
CDS-3UTR CAA 90 bp AGCAGCATAAGAACAAACATGAAGGTACTCAGCACCTGGAAGGTTTGGGCCAGCGCCAACATCTTATCCTaGCTGGAATCTCTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: SSIRTNMKVLSTWKVWASANILS*LESLCS
Trigger: AGAGCAGAGAGATTCCAGCAAGGATAAGATGTTGGC...GCTGGCCCAAACCTTCCAGGTGCTGAGTACCTTCATGTTTGTTCTTATGCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636771.1
CDS-3UTR CAA 90 bp TCCGGGTCCCTCCTTTCTTCAAGCACCCATGTGTCTATGACAGTCATACAAAGAGGAACACCTGGAGCTTaGACTCCAAGGAGATTGTCA +
Preference number: 5 (lower is better)
Translates to: SGSLLSSSTHVSMTVIQRGTPGA*TPRRLS
Trigger: TGACAATCTCCTTGGAGTCAAAGCTCCAGGTGTTCC...TCTTTGTATGACTGTCATAGACACATGGGTGCTTGAAGAAAGGAGGGACCCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CAA 90 bp GGAGACACATTGGGTGGTAAAGGCTGGGATGGCTTCCCCTTCCCAAAAGAAATTGACACAGTAGCACCTTaGGCAGTTGATTATAGTGGG +
Preference number: 5 (lower is better)
Translates to: GDTLGGKGWDGFPFPKEIDTVAP*AVDYSG
Trigger: CCCACTATAATCAACTGCCAAAGGTGCTACTGTGTC...AATTTCTTTTGGGAAGGGGAAGCCATCCCAGCCTTTACCACCCAATGTGTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp AATACTGTGCTGCTTTTGCCAATCAACATTCTCTCCAAAAGCACACAAGCTCACGCTACTTGTCTCATTTaGCCTCCCTGCCCCTCCACC +
Preference number: 5 (lower is better)
Translates to: NTVLLLPINILSKSTQAHATCLI*PPCPST
Trigger: GGTGGAGGGGCAGGGAGGCAAAATGAGACAAGTAGC...GTGAGCTTGTGTGCTTTTGGAGAGAATGTTGATTGGCAAAAGCAGCACAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp ATAAGGGCACTGCTTGTACCCAGTTCTTGGGAAGCCACAGTCATCAGCAACTCTACTAACCAAGGCTACTaGTCTCATTTTGCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: IRALLVPSSWEATVISNSTNQGY*SHFASL
Trigger: CAGGGAGGCAAAATGAGACAAGTAGCCTTGGTTAGT...AGAGTTGCTGATGACTGTGGCTTCCCAAGAACTGGGTACAAGCAGTGCCCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CAA 90 bp CACTGCTTGTACCCAGTTCTTGGGAAGCCACAGTCATCAGCAACTCTAAGACTAGAAGCAGGGGCATTGTaGCTCCAGTATTTTCAGTGG +
Preference number: 5 (lower is better)
Translates to: HCLYPVLGKPQSSATLRLEAGAL*LQYFQW
Trigger: CCACTGAAAATACTGGAGCAACAATGCCCCTGCTTC...TAGTCTTAGAGTTGCTGATGACTGTGGCTTCCCAAGAACTGGGTACAAGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp AAATGCAATGGGGGCCATGATGGTGATGAAGAAGCCATCGCAAAGGCCCAGGAATCTGAATGGGCAGATTaGGGACCTATGAATGTCTTC +
Preference number: 5 (lower is better)
Translates to: KCNGGHDGDEEAIAKAQESEWAD*GPMNVF
Trigger: GAAGACATTCATAGGTCCCAAATCTGCCCATTCAGA...TTCCTGGGCCTTTGCGATGGCTTCTTCATCACCATCATGGCCCCCATTGCATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636771.1
CDS-3UTR CAA 90 bp GTCACCTACTTCAGAGGGATCAAAGTGGTTCAGAGTCTACCTTTCATGGCACCTGATACCAAAGCCTGCTaGGAACTCCACTTGGCGATT +
Preference number: 5 (lower is better)
Translates to: VTYFRGIKVVQSLPFMAPDTKAC*ELHLAI
Trigger: AATCGCCAAGTGGAGTTCCAAGCAGGCTTTGGTATC...AGGTGCCATGAAAGGTAGACTCTGAACCACTTTGATCCCTCTGAAGTAGGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636771.1
CDS-3UTR CAA 90 bp CTTCAGAGGGATCAAAGTGGTTCAGAGTCTACCTTTCATGGCACCTTTAATGCCAAGAAAGGCATTAGATaGGTTCCTCAGGGTTGGGGG +
Preference number: 5 (lower is better)
Translates to: LQRDQSGSESTFHGTFNAKKGIR*VPQGWG
Trigger: CCCCCAACCCTGAGGAACCAATCTAATGCCTTTCTT...GGCATTAAAGGTGCCATGAAAGGTAGACTCTGAACCACTTTGATCCCTCTGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp CAAATATGGATGGCAATGACCTCCTCAGCAAACAGAGATTTGGGCCTACCCTATGGAACACCTGGAGCTTaGACTCCAAGGAGATTGTCA +
Preference number: 5 (lower is better)
Translates to: QIWMAMTSSANRDLGLPYGTPGA*TPRRLS
Trigger: TGACAATCTCCTTGGAGTCAAAGCTCCAGGTGTTCC...ATAGGGTAGGCCCAAATCTCTGTTTGCTGAGGAGGTCATTGCCATCCATATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CAA 90 bp CTCCTAGGGCCCAGATTCTCCTGTTCCACTACTGTTAGAACTGACAGGATAGTAGACACAGTAGCACCTTaGGCAGTTGATTATAGTGGG +
Preference number: 5 (lower is better)
Translates to: LLGPRFSCSTTVRTDRIVDTVAP*AVDYSG
Trigger: CCCACTATAATCAACTGCCAAAGGTGCTACTGTGTC...TACTATCCTGTCAGTTCTAACAGTAGTGGAACAGGAGAATCTGGGCCCTAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp TCAGCAACTCTAAGACTAACCAAGGCTACTTGTCTCATTTTGCCTCCCTGCCCCTCTGAATGGGCAGATTaGGGACCTATGAATGTCTTC +
Preference number: 5 (lower is better)
Translates to: SATLRLTKATCLILPPCPSEWAD*GPMNVF
Trigger: GAAGACATTCATAGGTCCCAAATCTGCCCATTCAGA...GGGGCAGGGAGGCAAAATGAGACAAGTAGCCTTGGTTAGTCTTAGAGTTGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp ATAAGGGCACTGCTTGTACCCAGTTCTTGGGAAGCCACAGTCATCAGCAACTCTTTTCTTGAACATCCTTaGATGCATCAGAGGGACGAA +
Preference number: 5 (lower is better)
Translates to: IRALLVPSSWEATVISNSFLEHP*MHQRDE
Trigger: TTCGTCCCTCTGATGCATCAAAGGATGTTCAAGAAA...AGAGTTGCTGATGACTGTGGCTTCCCAAGAACTGGGTACAAGCAGTGCCCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CAA 90 bp CTAGATTTAACTGTGGTGCATAAGAGGCTGCATCCTACTCTAAATATTAATACTCCGAAGATGGAGCCGTaGCACCAGGTGGCAGCGAAC +
Preference number: 5 (lower is better)
Translates to: LDLTVVHKRLHPTLNINTPKMEP*HQVAAN
Trigger: GTTCGCTGCCACCTGGTGCAACGGCTCCATCTTCGG...AGTATTAATATTTAGAGTAGGATGCAGCCTCTTATGCACCACAGTTAAATCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp AATATGGATGGCAATGACCTCCTCAGCAAACAGAGATTTGGGCCTACCCTATTACATGAGTGGGAACTATaGTCTTCTTTGGAGCCCCTC +
Preference number: 5 (lower is better)
Translates to: NMDGNDLLSKQRFGPTLLHEWEL*SSLEPL
Trigger: GAGGGGCTCCAAAGAAGACAATAGTTCCCACTCATG...TAATAGGGTAGGCCCAAATCTCTGTTTGCTGAGGAGGTCATTGCCATCCATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp CAGTCATCAGCAACTCTAAGACTAACCAAGGCTACTTGTCTCATTTTGCCTCCCAGGGGGCTCAGGACTTaGGCCTTGAATGAAATCATT +
Preference number: 5 (lower is better)
Translates to: QSSATLRLTKATCLILPPRGLRT*ALNEII
Trigger: AATGATTTCATTCAAGGCCAAAGTCCTGAGCCCCCT...GGGAGGCAAAATGAGACAAGTAGCCTTGGTTAGTCTTAGAGTTGCTGATGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp CAGTCATCAGCAACTCTAAGACTAACCAAGGCTACTTGTCTCATTTTGCCTCCCTTTCTTGAACATCCTTaGATGCATCAGAGGGACGAA +
Preference number: 5 (lower is better)
Translates to: QSSATLRLTKATCLILPPFLEHP*MHQRDE
Trigger: TTCGTCCCTCTGATGCATCAAAGGATGTTCAAGAAA...GGGAGGCAAAATGAGACAAGTAGCCTTGGTTAGTCTTAGAGTTGCTGATGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CAA 90 bp GAATGGGGTGCTGGGAGGGCCTTGAGGTTAATGCCTTGGACTGTAAGATTTGTACTAGGATTATATAGCTaGAGCGAAAAAGTGAGATGT +
Preference number: 5 (lower is better)
Translates to: EWGAGRALRLMPWTVRFVLGLYS*SEKVRC
Trigger: ACATCTCACTTTTTCGCTCAAGCTATATAATCCTAG...TACAAATCTTACAGTCCAAGGCATTAACCTCAAGGCCCTCCCAGCACCCCATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CAA 90 bp TTGTTCGTTCTAGATTTAACTGTGGTGCATAAGAGGCTGCATCCTACTCTAAATGGAACACCTGGAGCTTaGACTCCAAGGAGATTGTCA +
Preference number: 5 (lower is better)
Translates to: LFVLDLTVVHKRLHPTLNGTPGA*TPRRLS
Trigger: TGACAATCTCCTTGGAGTCAAAGCTCCAGGTGTTCC...ATTTAGAGTAGGATGCAGCCTCTTATGCACCACAGTTAAATCTAGAACGAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp TCCCAAGCTTTCCCAGATCCTGGGAGGAGAAAGGCCCTGGAAAATTTAAAAGCACTTGAGGTTAATGCCTaGGACTGTAAGATTTGTAAA +
Preference number: 5 (lower is better)
Translates to: SQAFPDPGRRKALENLKALEVNA*DCKICK
Trigger: TTTACAAATCTTACAGTCCAAGGCATTAACCTCAAG...TGCTTTTAAATTTTCCAGGGCCTTTCTCCTCCCAGGATCTGGGAAAGCTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CAA 90 bp TTGTTCGTTCTAGATTTAACTGTGGTGCATAAGAGGCTGCATCCTACTCTAAATACTAACCAAGGCTACTaGTCTCATTTTGCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: LFVLDLTVVHKRLHPTLNTNQGY*SHFASL
Trigger: CAGGGAGGCAAAATGAGACAAGTAGCCTTGGTTAGT...ATTTAGAGTAGGATGCAGCCTCTTATGCACCACAGTTAAATCTAGAACGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp CAAATATGGATGGCAATGACCTCCTCAGCAAACAGAGATTTGGGCCTACCCTATCTAGGATTATATAGCTaGAGCGAAAAAGTGAGATGT +
Preference number: 5 (lower is better)
Translates to: QIWMAMTSSANRDLGLPYLGLYS*SEKVRC
Trigger: ACATCTCACTTTTTCGCTCAAGCTATATAATCCTAG...ATAGGGTAGGCCCAAATCTCTGTTTGCTGAGGAGGTCATTGCCATCCATATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CAA 90 bp GCCACAGTCATCAGCAACTCTAAGACTAACCAAGGCTACTTGTCTCATTTTGCCCTTGAGGTTAATGCCTaGGACTGTAAGATTTGTAAA +
Preference number: 5 (lower is better)
Translates to: ATVISNSKTNQGYLSHFALEVNA*DCKICK
Trigger: TTTACAAATCTTACAGTCCAAGGCATTAACCTCAAG...GGCAAAATGAGACAAGTAGCCTTGGTTAGTCTTAGAGTTGCTGATGACTGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CAA 90 bp TGGTGTTTAAGGTTTCTTCCCTATATGATATTCTACTCTTCCAGTCTAGGATTAGCCAACATCTTATCCTaGCTGGAATCTCTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: WCLRFLPYMIFYSSSLGLANILS*LESLCS
Trigger: AGAGCAGAGAGATTCCAGCAAGGATAAGATGTTGGC...TAATCCTAGACTGGAAGAGTAGAATATCATATAGGGAAGAAACCTTAAACACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587091.6
ENST00000590447.1
ENST00000636771.1
CDS-3UTR CAA 90 bp TGGTGTTTAAGGTTTCTTCCCTATATGATATTCTACTCTTCCAGTCTAGGATTAAGGGGGCTCAGGACTTaGGCCTTGAATGAAATCATT +
Preference number: 5 (lower is better)
Translates to: WCLRFLPYMIFYSSSLGLRGLRT*ALNEII
Trigger: AATGATTTCATTCAAGGCCAAAGTCCTGAGCCCCCT...TAATCCTAGACTGGAAGAGTAGAATATCATATAGGGAAGAAACCTTAAACACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS-3UTR CAA 90 bp CTAGATTTAACTGTGGTGCATAAGAGGCTGCATCCTACTCTAAATATTAATACTCTAGGATTATATAGCTaGAGCGAAAAAGTGAGATGT +
Preference number: 5 (lower is better)
Translates to: LDLTVVHKRLHPTLNINTLGLYS*SEKVRC
Trigger: ACATCTCACTTTTTCGCTCAAGCTATATAATCCTAG...AGTATTAATATTTAGAGTAGGATGCAGCCTCTTATGCACCACAGTTAAATCTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587091.6
ENST00000636771.1
CDS GCA 72 bp TGCTGCTGCAGCTGCTGCTGCTCGGAGGGCTGCTGCTaGCGCTGCCGCTGCCTCCTCCTCCAGGCTCCGCGC +
Preference number: 6 (lower is better)
Translates to: CCCSCCCSEGCC*RCRCLLLQAPR
Trigger: GCGCGGAGCCTGGAGGAGGAGGCAGCGGCAGCGGCAGCAGCAGCCCTCCGAGCAGCAGCAGCTGCAGCAGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587091.6
CDS GCA 72 bp CCGCGGGTCTCTACCGTAGGCGTGGGCTCGGGTTCGTaGACCCGCTCGGACTCGAACTCCAGCTCCGGCAGG +
Preference number: 6 (lower is better)
Translates to: PRVSTVGVGSGS*TRSDSNSSSGR
Trigger: CCTGCCGGAGCTGGAGTTCGAGTCCGAGCGGGTGCACGAACCCGAGCCCACGCCTACGGTAGAGACCCGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587091.6
CDS GCA 72 bp AGGAGCCGCTTTGTGGCTGGTACTTGTTTCTGCTGCTaGAGCTGCTGCTGCTCGGAGGGCTGCTGCTGCCGC +
Preference number: 6 (lower is better)
Translates to: RSRFVAGTCFCC*SCCCSEGCCCR
Trigger: GCGGCAGCAGCAGCCCTCCGAGCAGCAGCAGCTGCAGCAGCAGAAACAAGTACCAGCCACAAAGCGGCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587091.6
CDS GCA 72 bp CAGAGGAGCCGCTTTGTGGCTGGTACTTGTTTCTGCTaGTGCAGCTGCTGCTGCTCGGAGGGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: QRSRFVAGTCFC*CSCCCSEGCCC
Trigger: GCAGCAGCAGCCCTCCGAGCAGCAGCAGCTGCAGCAGCAGAAACAAGTACCAGCCACAAAGCGGCTCCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587091.6
CDS CAA 72 bp CTGCTTGGGCCAGAGGAGCCGCTTTGTGGCTGGTACTaGTTTCTGCTGCTGCAGCTGCTGCTGCTCGGAGGG +
Preference number: 6 (lower is better)
Translates to: LLGPEEPLCGWY*FLLLQLLLLGG
Trigger: CCCTCCGAGCAGCAGCAGCTGCAGCAGCAGAAACAAGTACCAGCCACAAAGCGGCTCCTCTGGCCCAAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587091.6
CDS TCA 72 bp TCCTCCCGAACTCATTTTATGAGGCCAGCATCATTCTaGTACCAAAGCCTGCTTGGAACTCCACTTGGCGAT +
Preference number: 6 (lower is better)
Translates to: SSRTHFMRPASF*YQSLLGTPLGD
Trigger: ATCGCCAAGTGGAGTTCCAAGCAGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTCGGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636771.1
CDS TCA 72 bp AATAGAAAAAGAGGGAATCCTCCCGAACTCATTTTATaGGGCCAGCATCATTCTGATACCAAAGCCTGCTTG +
Preference number: 6 (lower is better)
Translates to: NRKRGNPPELIL*GQHHSDTKACL
Trigger: CAAGCAGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTCGGGAGGATTCCCTCTTTTTCTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636771.1