Pregenerated sensors for SLC16A13 (Homo sapiens)
Ensembl gene IDs: ENSG00000174327Ensembl transcript IDs: ENST00000308027.7, ENST00000575844.1
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGGCCTGCTCTAGGGGGAGGCAGATCAAGAATCTTAAGGCACTGTaGTTCTGTGGAGACCAAGACGTGGCAAGAGAAGACCTGGAGCTG | + |
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Preference number: 1 (lower is better) Translates to: QACSRGRQIKNLKAL*FCGDQDVAREDLEL Trigger: CAGCTCCAGGTCTTCTCTTGCCACGTCTTGGTCTCCACAGAACCACAGTGCCTTAAGATTCTTGATCTGCCTCCCCCTAGAGCAGGCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| 3UTR-3UTR CCA 90 bp | AGGCCTGCTCTAGGGGGAGGCAGATCAAGAATCTTAAGGCACTGTGGTTCTGTGGGAGCTGTCAAGCTTTaGCTTTCTGGGCCTGACTCT | + |
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Preference number: 2 (lower is better) Translates to: RPALGGGRSRILRHCGSVGAVKL*LSGPDS Trigger: AGAGTCAGGCCCAGAAAGCCAAAGCTTGACAGCTCC...CACAGAACCACAGTGCCTTAAGATTCTTGATCTGCCTCCCCCTAGAGCAGGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| 3UTR CCA 72 bp | TCTAGGGGGAGGCAGATCAAGAATCTTAAGGCACTGTaGTTCTGTGGAGACCAAGACGTGGCAAGAGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: SRGRQIKNLKAL*FCGDQDVARED Trigger: GTCTTCTCTTGCCACGTCTTGGTCTCCACAGAACCACAGTGCCTTAAGATTCTTGATCTGCCTCCCCCTAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR GCA 90 bp | GGCAAGAGAAGACCTGGAGCTGTCAAGCTTTGGCTTTCTGGGCCTGACTCTGTGGCCCACGCCTGTCAGTaGCAGCCCGGTGGCCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: GKRRPGAVKLWLSGPDSVAHACQ*QPGGQG Trigger: TCCCTGGCCACCGGGCTGGCACTGACAGGCGTGGGC...CACAGAGTCAGGCCCAGAAAGCCAAAGCTTGACAGCTCCAGGTCTTCTCTTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR GCA 90 bp | ACCAAGACGTGGCAAGAGAAGACCTGGAGCTGTCAAGCTTTGGCTTTCTGGGCCCCAGGAGACGCGCGCTaGCTGCTCCTCAAACGCCGC | + |
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Preference number: 4 (lower is better) Translates to: TKTWQEKTWSCQALAFWAPGDAR*LLLKRR Trigger: GCGGCGTTTGAGGAGCAGGCAGCGCGCGTCTCCTGG...GGCCCAGAAAGCCAAAGCTTGACAGCTCCAGGTCTTCTCTTGCCACGTCTTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR CCA 90 bp | ACCAAGACGTGGCAAGAGAAGACCTGGAGCTGTCAAGCTTTGGCTTTCTGGGCCAGTCTCCCGGGGGCGTaGTTCCGCGAGCTCGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: TKTWQEKTWSCQALAFWASLPGA*FRELGA Trigger: AGCTCCGAGCTCGCGGAACCACGCCCCCGGGAGACT...GGCCCAGAAAGCCAAAGCTTGACAGCTCCAGGTCTTCTCTTGCCACGTCTTGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR CCA 90 bp | CTAGGGGGAGGCAGATCAAGAATCTTAAGGCACTGTGGTTCTGTGGAGACCAAGAGACCTGGCCCGCGCTaGCCGGGCCAGAGTCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: LGGGRSRILRHCGSVETKRPGPR*PGQSLP Trigger: CGGGAGACTCTGGCCCGGCCAGCGCGGGCCAGGTCT...CTTGGTCTCCACAGAACCACAGTGCCTTAAGATTCTTGATCTGCCTCCCCCTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR CCA 90 bp | ACCAAGACGTGGCAAGAGAAGACCTGGAGCTGTCAAGCTTTGGCTTTCTGGGCCTCAGTGCCAGCCCGGTaGCCAGGGATCGTCGGCGAG | + |
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Preference number: 4 (lower is better) Translates to: TKTWQEKTWSCQALAFWASVPAR*PGIVGE Trigger: CTCGCCGACGATCCCTGGCCACCGGGCTGGCACTGA...GGCCCAGAAAGCCAAAGCTTGACAGCTCCAGGTCTTCTCTTGCCACGTCTTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR TCA 90 bp | CCCAGGCCTGCTCTAGGGGGAGGCAGATCAAGAATCTTAAGGCACTGTGGTTCTGCCAGAGGGTGGAACTaGGTTTGGGCCCCACCCCTG | + |
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Preference number: 4 (lower is better) Translates to: PRPALGGGRSRILRHCGSARGWN*VWAPPL Trigger: CAGGGGTGGGGCCCAAACTCAGTTCCACCCTCTGGC...AGAACCACAGTGCCTTAAGATTCTTGATCTGCCTCCCCCTAGAGCAGGCCTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR GCA 90 bp | AGGCCTGCTCTAGGGGGAGGCAGATCAAGAATCTTAAGGCACTGTGGTTCTGTGGCGGCGAGAGGCCCCTaGACCTTTTCCCAAGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: RPALGGGRSRILRHCGSVAARGP*TFSQGG Trigger: CCCGCCTTGGGAAAAGGTGCAGGGGCCTCTCGCCGC...CACAGAACCACAGTGCCTTAAGATTCTTGATCTGCCTCCCCCTAGAGCAGGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR CCA 90 bp | GCAAGAGAAGACCTGGAGCTGTCAAGCTTTGGCTTTCTGGGCCTGACTCTGTGGTTTGGGCCCCACCCCTaGAGCGCGCCAGTTTCCGTG | + |
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Preference number: 4 (lower is better) Translates to: AREDLELSSFGFLGLTLWFGPHP*SAPVSV Trigger: CACGGAAACTGGCGCGCTCCAGGGGTGGGGCCCAAA...CCACAGAGTCAGGCCCAGAAAGCCAAAGCTTGACAGCTCCAGGTCTTCTCTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR TCA 90 bp | GGGAGGCAGATCAAGAATCTTAAGGCACTGTGGTTCTGTGGAGACCAAGACGTGCCGCGAGCTCGGAGCTaGGCTAGTTCAAGCCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: GRQIKNLKALWFCGDQDVPRARS*ASSSRG Trigger: GCCCCGGCTTGAACTAGCTCAGCTCCGAGCTCGCGG...CACGTCTTGGTCTCCACAGAACCACAGTGCCTTAAGATTCTTGATCTGCCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR GCA 90 bp | TCTAGGGGGAGGCAGATCAAGAATCTTAAGGCACTGTGGTTCTGTGGAGACCAATGGACGCCGCACCTCTaGACACCCACCCCCGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: SRGRQIKNLKALWFCGDQWTPHL*TPTPAA Trigger: GGCAGCGGGGGTGGGTGTGCAGAGGTGCGGCGTCCA...TTGGTCTCCACAGAACCACAGTGCCTTAAGATTCTTGATCTGCCTCCCCCTAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR GCA 90 bp | GGGGGAGGCAGATCAAGAATCTTAAGGCACTGTGGTTCTGTGGAGACCAAGACGGAGACGCGCGCTGCCTaGTCCTCAAACGCCGCCACA | + |
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Preference number: 4 (lower is better) Translates to: GGGRSRILRHCGSVETKTETRAA*SSNAAT Trigger: TGTGGCGGCGTTTGAGGAGCAGGCAGCGCGCGTCTC...CGTCTTGGTCTCCACAGAACCACAGTGCCTTAAGATTCTTGATCTGCCTCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR CCA 90 bp | AGGCCTGCTCTAGGGGGAGGCAGATCAAGAATCTTAAGGCACTGTGGTTCTGTGGCAGGAGCCGGGTTCTaGACGCCGCACCTCTGCACA | + |
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Preference number: 4 (lower is better) Translates to: RPALGGGRSRILRHCGSVAGAGF*TPHLCT Trigger: TGTGCAGAGGTGCGGCGTCCAGAACCCGGCTCCTGC...CACAGAACCACAGTGCCTTAAGATTCTTGATCTGCCTCCCCCTAGAGCAGGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR CCA 90 bp | CCCAGGCCTGCTCTAGGGGGAGGCAGATCAAGAATCTTAAGGCACTGTGGTTCTCCACAGGCCACTAGGTaGAGGGAGAGGGCAGACACC | + |
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Preference number: 4 (lower is better) Translates to: PRPALGGGRSRILRHCGSPQATR*RERADT Trigger: GGTGTCTGCCCTCTCCCTCCACCTAGTGGCCTGTGG...AGAACCACAGTGCCTTAAGATTCTTGATCTGCCTCCCCCTAGAGCAGGCCTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR GCA 90 bp | AAGAGAAGACCTGGAGCTGTCAAGCTTTGGCTTTCTGGGCCTGACTCTGTGGAGTGGGCCCGAACTTCGTaGTCAGGGCACTGCCTACCG | + |
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Preference number: 4 (lower is better) Translates to: KRRPGAVKLWLSGPDSVEWARTS*SGHCLP Trigger: CGGTAGGCAGTGCCCTGAGCACGAAGTTCGGGCCCA...CTCCACAGAGTCAGGCCCAGAAAGCCAAAGCTTGACAGCTCCAGGTCTTCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR CCA 90 bp | GCAAGAGAAGACCTGGAGCTGTCAAGCTTTGGCTTTCTGGGCCTGACTCTGTGGTCGTGTCACAGGCCCTaGGACTGCATCTCCCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: AREDLELSSFGFLGLTLWSCHRP*DCISQP Trigger: TGGCTGGGAGATGCAGTCCCAGGGCCTGTGACACGA...CCACAGAGTCAGGCCCAGAAAGCCAAAGCTTGACAGCTCCAGGTCTTCTCTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR TCA 90 bp | GGGGGAGGCAGATCAAGAATCTTAAGGCACTGTGGTTCTGTGGAGACCAAGACGCGGAGGAAGGGGCCATaGTGGAGGAGAGAGGTGAGT | + |
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Preference number: 4 (lower is better) Translates to: GGGRSRILRHCGSVETKTRRKGP*WRREVS Trigger: ACTCACCTCTCTCCTCCATCATGGCCCCTTCCTCCG...CGTCTTGGTCTCCACAGAACCACAGTGCCTTAAGATTCTTGATCTGCCTCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR TCA 90 bp | GGGAGGCAGATCAAGAATCTTAAGGCACTGTGGTTCTGTGGAGACCAAGACGTGAGGGCTGTGGGAGCCTaGGCTACAGGGAACAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: GRQIKNLKALWFCGDQDVRAVGA*ATGNRA Trigger: AGCCCTGTTCCCTGTAGCTCAGGCTCCCACAGCCCT...CACGTCTTGGTCTCCACAGAACCACAGTGCCTTAAGATTCTTGATCTGCCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR TCA 90 bp | GGCAGATCAAGAATCTTAAGGCACTGTGGTTCTGTGGAGACCAAGACGTGGCAAATCCCGGAGGTAGCCTaGGAGAGGAGGCCCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: GRSRILRHCGSVETKTWQIPEVA*ERRPQQ Trigger: CTGCTGGGGCCTCCTCTCTCAGGCTACCTCCGGGAT...TTGCCACGTCTTGGTCTCCACAGAACCACAGTGCCTTAAGATTCTTGATCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR GCA 90 bp | CAGGCCTGCTCTAGGGGGAGGCAGATCAAGAATCTTAAGGCACTGTGGTTCTGTTCGTGCTCAGGGCACTaGCTACCGGGCTCCCAAACT | + |
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Preference number: 4 (lower is better) Translates to: QACSRGRQIKNLKALWFCSCSGH*LPGSQT Trigger: AGTTTGGGAGCCCGGTAGGCAGTGCCCTGAGCACGA...ACAGAACCACAGTGCCTTAAGATTCTTGATCTGCCTCCCCCTAGAGCAGGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR GCA 90 bp | CAGGCCTGCTCTAGGGGGAGGCAGATCAAGAATCTTAAGGCACTGTGGTTCTGTGGTTGGCACACACATTaGAGGAGCCCCAGGCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: QACSRGRQIKNLKALWFCGWHTH*RSPRPA Trigger: AGCAGGCCTGGGGCTCCTGCAATGTGTGTGCCAACC...ACAGAACCACAGTGCCTTAAGATTCTTGATCTGCCTCCCCCTAGAGCAGGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR CCA 90 bp | AGAATCTTAAGGCACTGTGGTTCTGTGGAGACCAAGACGTGGCAAGAGAAGACCATAGGACTGAAGACCTaGCCCGCGCTGGCCGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: RILRHCGSVETKTWQEKTIGLKT*PALAGP Trigger: TGGCCCGGCCAGCGCGGGCCAGGTCTTCAGTCCTAT...GGTCTTCTCTTGCCACGTCTTGGTCTCCACAGAACCACAGTGCCTTAAGATTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR CCA 90 bp | CAGGCCTGCTCTAGGGGGAGGCAGATCAAGAATCTTAAGGCACTGTGGTTCTGTGCACCGCGATTCCTATaGAGGCGATCCAGGAGACGC | + |
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Preference number: 4 (lower is better) Translates to: QACSRGRQIKNLKALWFCAPRFL*RRSRRR Trigger: GCGTCTCCTGGATCGCCTCCATAGGAATCGCGGTGC...ACAGAACCACAGTGCCTTAAGATTCTTGATCTGCCTCCCCCTAGAGCAGGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR TCA 90 bp | CAGGCCTGCTCTAGGGGGAGGCAGATCAAGAATCTTAAGGCACTGTGGTTCTGTTCCAGGCGTAGTGGCTaGGCAGCCACTGGAAAAAGG | + |
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Preference number: 4 (lower is better) Translates to: QACSRGRQIKNLKALWFCSRRSG*AATGKR Trigger: CCTTTTTCCAGTGGCTGCTCAGCCACTACGCCTGGA...ACAGAACCACAGTGCCTTAAGATTCTTGATCTGCCTCCCCCTAGAGCAGGCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR TCA 90 bp | CAGGCCTGCTCTAGGGGGAGGCAGATCAAGAATCTTAAGGCACTGTGGTTCTGTGAGAATGCCACTCCCTaGAAGAAGGAAGGCCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: QACSRGRQIKNLKALWFCENATP*KKEGPS Trigger: GCTGGGGCCTTCCTTCTTTCAGGGAGTGGCATTCTC...ACAGAACCACAGTGCCTTAAGATTCTTGATCTGCCTCCCCCTAGAGCAGGCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR GCA 90 bp | AGGCAGATCAAGAATCTTAAGGCACTGTGGTTCTGTGGAGACCAAGACGTGGCACACAGGCCCTGGGACTaGATCTCCCAGCCATCCGGA | + |
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Preference number: 4 (lower is better) Translates to: RQIKNLKALWFCGDQDVAHRPWD*ISQPSG Trigger: TCCGGATGGCTGGGAGATGCAGTCCCAGGGCCTGTG...TGCCACGTCTTGGTCTCCACAGAACCACAGTGCCTTAAGATTCTTGATCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR CCA 90 bp | GCAAGAGAAGACCTGGAGCTGTCAAGCTTTGGCTTTCTGGGCCTGACTCTGTGGAACACAAGCGCCGACTaGAAGAACGCTGAGAGCACC | + |
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Preference number: 4 (lower is better) Translates to: AREDLELSSFGFLGLTLWNTSAD*KNAEST Trigger: GGTGCTCTCAGCGTTCTTCCAGTCGGCGCTTGTGTT...CCACAGAGTCAGGCCCAGAAAGCCAAAGCTTGACAGCTCCAGGTCTTCTCTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR CCA 90 bp | GGCAAGAGAAGACCTGGAGCTGTCAAGCTTTGGCTTTCTGGGCCTGACTCTGTGGTGGAGACCAAGACGTaGCAAGAGAAGACCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: GKRRPGAVKLWLSGPDSVVETKT*QEKTWS Trigger: GCTCCAGGTCTTCTCTTGCCACGTCTTGGTCTCCAC...CACAGAGTCAGGCCCAGAAAGCCAAAGCTTGACAGCTCCAGGTCTTCTCTTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR CCA 90 bp | ACCAAGACGTGGCAAGAGAAGACCTGGAGCTGTCAAGCTTTGGCTTTCTGGGCCGGCACTGTGGTTCTGTaGAGACCAAGACGTGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: TKTWQEKTWSCQALAFWAGTVVL*RPRRGK Trigger: CTTGCCACGTCTTGGTCTCCACAGAACCACAGTGCC...GGCCCAGAAAGCCAAAGCTTGACAGCTCCAGGTCTTCTCTTGCCACGTCTTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR TCA 90 bp | AAGAGAAGACCTGGAGCTGTCAAGCTTTGGCTTTCTGGGCCTGACTCTGTGGAGTTGGCTTTCTGGGCCTaGCTCTGTGGAGTTCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: KRRPGAVKLWLSGPDSVELAFWA*LCGVQS Trigger: GGACTGAACTCCACAGAGTCAGGCCCAGAAAGCCAA...CTCCACAGAGTCAGGCCCAGAAAGCCAAAGCTTGACAGCTCCAGGTCTTCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR GCA 90 bp | CCCAGGCCTGCTCTAGGGGGAGGCAGATCAAGAATCTTAAGGCACTGTGGTTCTAAGAAGCCGTGTAGTTaGCTGTCACATCCCGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: PRPALGGGRSRILRHCGSKKPCS*LSHPGG Trigger: ACCTCCGGGATGTGACAGGCAACTACACGGCTTCTT...AGAACCACAGTGCCTTAAGATTCTTGATCTGCCTCCCCCTAGAGCAGGCCTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR CCA 90 bp | GGCAGATCAAGAATCTTAAGGCACTGTGGTTCTGTGGAGACCAAGACGTGGCAAGGTTCGGTGTTCGGCTaGGAGCCAGAGGGTGGAACT | + |
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Preference number: 4 (lower is better) Translates to: GRSRILRHCGSVETKTWQGSVFG*EPEGGT Trigger: AGTTCCACCCTCTGGCTCCCAGCCGAACACCGAACC...TTGCCACGTCTTGGTCTCCACAGAACCACAGTGCCTTAAGATTCTTGATCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR CCA 90 bp | ATCAAGAATCTTAAGGCACTGTGGTTCTGTGGAGACCAAGACGTGGCAAGAGAACTCAGCCAGGGAGGGTaGGCGGAGGAGAGCACCACA | + |
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Preference number: 4 (lower is better) Translates to: IKNLKALWFCGDQDVARELSQGG*AEESTT Trigger: TGTGGTGCTCTCCTCCGCCCACCCTCCCTGGCTGAG...TTCTCTTGCCACGTCTTGGTCTCCACAGAACCACAGTGCCTTAAGATTCTTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR CCA 90 bp | TCTAGGGGGAGGCAGATCAAGAATCTTAAGGCACTGTGGTTCTGTGGAGACCAAAGGAGAGAGGTGAGTTaGGCCCTGGGACCACCCACA | + |
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Preference number: 4 (lower is better) Translates to: SRGRQIKNLKALWFCGDQRREVS*ALGPPT Trigger: TGTGGGTGGTCCCAGGGCCCAACTCACCTCTCTCCT...TTGGTCTCCACAGAACCACAGTGCCTTAAGATTCTTGATCTGCCTCCCCCTAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR CCA 90 bp | CAGGCCTGCTCTAGGGGGAGGCAGATCAAGAATCTTAAGGCACTGTGGTTCTGTACACCCCAGTCAAGGTaGTCCAGAGCATCAGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: QACSRGRQIKNLKALWFCTPQSR*SRASGV Trigger: GACTCCTGATGCTCTGGACCACCTTGACTGGGGTGT...ACAGAACCACAGTGCCTTAAGATTCTTGATCTGCCTCCCCCTAGAGCAGGCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR GCA 90 bp | AGGCAGATCAAGAATCTTAAGGCACTGTGGTTCTGTGGAGACCAAGACGTGGCAGGGCTCCCAAACTGCTaGACCGCGATTCCTATGGAG | + |
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Preference number: 4 (lower is better) Translates to: RQIKNLKALWFCGDQDVAGLPNC*TAIPME Trigger: CTCCATAGGAATCGCGGTGCAGCAGTTTGGGAGCCC...TGCCACGTCTTGGTCTCCACAGAACCACAGTGCCTTAAGATTCTTGATCTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR GCA 90 bp | AGATCAAGAATCTTAAGGCACTGTGGTTCTGTGGAGACCAAGACGTGGCAAGAGCCAGCGCAGCCAAGATaGCTCCAGTCATCACCACGG | + |
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Preference number: 4 (lower is better) Translates to: RSRILRHCGSVETKTWQEPAQPR*LQSSPR Trigger: CCGTGGTGATGACTGGAGGCATCTTGGCTGCGCTGG...CTCTTGCCACGTCTTGGTCTCCACAGAACCACAGTGCCTTAAGATTCTTGATCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR CCA 90 bp | TCAAGAATCTTAAGGCACTGTGGTTCTGTGGAGACCAAGACGTGGCAAGAGAAGTCCCAATCCAGGTCCTaGAGATGGGCCACCAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SRILRHCGSVETKTWQEKSQSRS*RWATRW Trigger: CCACCTGGTGGCCCATCTCCAGGACCTGGATTGGGA...CTTCTCTTGCCACGTCTTGGTCTCCACAGAACCACAGTGCCTTAAGATTCTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR CCA 90 bp | GGGGGAGGCAGATCAAGAATCTTAAGGCACTGTGGTTCTGTGGAGACCAAGACGTCTGTTACAAGGTCCTaGGGCCCGGAGGTAGTAGTT | + |
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Preference number: 4 (lower is better) Translates to: GGGRSRILRHCGSVETKTSVTRS*GPEVVV Trigger: AACTACTACCTCCGGGCCCCAGGACCTTGTAACAGA...CGTCTTGGTCTCCACAGAACCACAGTGCCTTAAGATTCTTGATCTGCCTCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR CCA 90 bp | CCCAGGCCTGCTCTAGGGGGAGGCAGATCAAGAATCTTAAGGCACTGTGGTTCTTGGCAAGAGAAGACCTaGAGCTGTCAAGCTTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: PRPALGGGRSRILRHCGSWQEKT*SCQALA Trigger: AGCCAAAGCTTGACAGCTCCAGGTCTTCTCTTGCCA...AGAACCACAGTGCCTTAAGATTCTTGATCTGCCTCCCCCTAGAGCAGGCCTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR TCA 90 bp | ATCAAGAATCTTAAGGCACTGTGGTTCTGTGGAGACCAAGACGTGGCAAGAGAACGACTGGAAGAACGCTaGGAGCACCACCACCCATCC | + |
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Preference number: 4 (lower is better) Translates to: IKNLKALWFCGDQDVARERLEER*EHHHPS Trigger: GGATGGGTGGTGGTGCTCTCAGCGTTCTTCCAGTCG...TTCTCTTGCCACGTCTTGGTCTCCACAGAACCACAGTGCCTTAAGATTCTTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR CCA 90 bp | ATCAAGAATCTTAAGGCACTGTGGTTCTGTGGAGACCAAGACGTGGCAAGAGAATCATCACCACGGGCCTaGGCCCGAACTTCGTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: IKNLKALWFCGDQDVARESSPRA*ARTSCS Trigger: TGAGCACGAAGTTCGGGCCCAGGCCCGTGGTGATGA...TTCTCTTGCCACGTCTTGGTCTCCACAGAACCACAGTGCCTTAAGATTCTTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR CCA 90 bp | GGCAGATCAAGAATCTTAAGGCACTGTGGTTCTGTGGAGACCAAGACGTGGCAACTGGGCCTGACTCTGTaGAGTTCAGTCCTCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: GRSRILRHCGSVETKTWQLGLTL*SSVLFQ Trigger: CTGGAAGAGGACTGAACTCCACAGAGTCAGGCCCAG...TTGCCACGTCTTGGTCTCCACAGAACCACAGTGCCTTAAGATTCTTGATCTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR GCA 90 bp | ATCAAGAATCTTAAGGCACTGTGGTTCTGTGGAGACCAAGACGTGGCAAGAGAAACCGGGCTCCCAAACTaGTGCACCGCGATTCCTATG | + |
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Preference number: 4 (lower is better) Translates to: IKNLKALWFCGDQDVARETGLPN*CTAIPM Trigger: CATAGGAATCGCGGTGCAGCAGTTTGGGAGCCCGGT...TTCTCTTGCCACGTCTTGGTCTCCACAGAACCACAGTGCCTTAAGATTCTTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR CCA 90 bp | TCTAGGGGGAGGCAGATCAAGAATCTTAAGGCACTGTGGTTCTGTGGAGACCAAGGAGCTGTCAAGCTTTaGCTTTCTGGGCCTGACTCT | + |
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Preference number: 4 (lower is better) Translates to: SRGRQIKNLKALWFCGDQGAVKL*LSGPDS Trigger: AGAGTCAGGCCCAGAAAGCCAAAGCTTGACAGCTCC...TTGGTCTCCACAGAACCACAGTGCCTTAAGATTCTTGATCTGCCTCCCCCTAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR GCA 90 bp | AGGCAGATCAAGAATCTTAAGGCACTGTGGTTCTGTGGAGACCAAGACGTGGCAATGCTCTCTATCATCTaGAACAGTCCCAGGCCACAG | + |
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Preference number: 4 (lower is better) Translates to: RQIKNLKALWFCGDQDVAMLSII*NSPRPQ Trigger: CTGTGGCCTGGGACTGTTGCAGATGATAGAGAGCAT...TGCCACGTCTTGGTCTCCACAGAACCACAGTGCCTTAAGATTCTTGATCTGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR CCA 90 bp | TCAAGAATCTTAAGGCACTGTGGTTCTGTGGAGACCAAGACGTGGCAAGAGAAGTGGCTGAGCAGCCACTaGAAAAAGGGGGCAAATGTG | + |
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Preference number: 4 (lower is better) Translates to: SRILRHCGSVETKTWQEKWLSSH*KKGANV Trigger: CACATTTGCCCCCTTTTTCCAGTGGCTGCTCAGCCA...CTTCTCTTGCCACGTCTTGGTCTCCACAGAACCACAGTGCCTTAAGATTCTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR CCA 90 bp | GGGGGAGGCAGATCAAGAATCTTAAGGCACTGTGGTTCTGTGGAGACCAAGACGATACTCAGGTATAGGTaGGTCAAGGAAGTAGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: GGGRSRILRHCGSVETKTILRYR*VKEVAK Trigger: TTTTGCTACTTCCTTGACCCACCTATACCTGAGTAT...CGTCTTGGTCTCCACAGAACCACAGTGCCTTAAGATTCTTGATCTGCCTCCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR CCA 90 bp | AGGCAGATCAAGAATCTTAAGGCACTGTGGTTCTGTGGAGACCAAGACGTGGCAAATCTTAAGGCACTGTaGTTCTGTGGAGACCAAGAC | + |
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Preference number: 4 (lower is better) Translates to: RQIKNLKALWFCGDQDVANLKAL*FCGDQD Trigger: GTCTTGGTCTCCACAGAACCACAGTGCCTTAAGATT...TGCCACGTCTTGGTCTCCACAGAACCACAGTGCCTTAAGATTCTTGATCTGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS TCA 90 bp | GCCGGGCCAGAGTCTCCCGGGGGCGTGGTTCCGCGAGCTCGGAGCTaGGCTAGTTCAAGCCGGGGCCGGATCGGTCCCGGTTCGGTGTTC | + |
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Preference number: 5 (lower is better) Translates to: AGPESPGGVVPRARS*ASSSRGRIGPGSVF Trigger: GAACACCGAACCGGGACCGATCCGGCCCCGGCTTGAACTAGCTCAGCTCCGAGCTCGCGGAACCACGCCCCCGGGAGACTCTGGCCCGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS TCA 90 bp | GGGCCTGGGCCCGAACTTCGTGCTCAGGGCACTGCCTACCGGGCCTaGGGAAGTGGAAGGGGCGCTGCGAGAAGATCTCAGGGGTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: GPGPELRAQGTAYRA*GSGRGAARRSQGSP Trigger: GGGAGACCCCTGAGATCTTCTCGCAGCGCCCCTTCCACTTCCTCAGGCCCGGTAGGCAGTGCCCTGAGCACGAAGTTCGGGCCCAGGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000575844.1 |
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| CDS GCA 90 bp | GTCGCAGTCCGCCAGATCCAGGCGCCGCACTCACTCCCAAACTGCTaGACCGCGATTCCTATGGAGGCGATCCAGGAGACGCGCGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: VAVRQIQAPHSLPNC*TAIPMEAIQETRAA Trigger: GGCAGCGCGCGTCTCCTGGATCGCCTCCATAGGAATCGCGGTGCAGCAGTTTGGGAGTGAGTGCGGCGCCTGGATCTGGCGGACTGCGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000575844.1 |
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| CDS CCA 90 bp | GGGCACTGCCTACCGGGCTCCCAAACTGCTGCACCGCGATTCCTATaGAGGCGATCCAGGAGACGCGCGCTGCCTGCTCCTCAAACGCCG | + |
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Preference number: 5 (lower is better) Translates to: GHCLPGSQTAAPRFL*RRSRRRALPAPQTP Trigger: CGGCGTTTGAGGAGCAGGCAGCGCGCGTCTCCTGGATCGCCTCCATAGGAATCGCGGTGCAGCAGTTTGGGAGCCCGGTAGGCAGTGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS GCA 90 bp | AGGGTCGCAGTCCGCCAGATCCAGGCGCCGCACTCACTCCCAAACTaGTGCACCGCGATTCCTATGGAGGCGATCCAGGAGACGCGCGCT | + |
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Preference number: 5 (lower is better) Translates to: RVAVRQIQAPHSLPN*CTAIPMEAIQETRA Trigger: AGCGCGCGTCTCCTGGATCGCCTCCATAGGAATCGCGGTGCAGCAGTTTGGGAGTGAGTGCGGCGCCTGGATCTGGCGGACTGCGACCCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000575844.1 |
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| CDS CCA 90 bp | TCCAGGCGCCGCACTCACTCCCAAACTGCTGCACCGCGATTCCTATaGAGGCGATCCAGGAGACGCGCGCTGCCTGCTCCTCAAACGCCG | + |
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Preference number: 5 (lower is better) Translates to: SRRRTHSQTAAPRFL*RRSRRRALPAPQTP Trigger: CGGCGTTTGAGGAGCAGGCAGCGCGCGTCTCCTGGATCGCCTCCATAGGAATCGCGGTGCAGCAGTTTGGGAGTGAGTGCGGCGCCTGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000575844.1 |
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| CDS CCA 90 bp | CCCAGTCAAGGTGGTCCAGAGCATCAGGAGTCGTGTCACAGGCCCTaGGACTGCATCTCCCAGCCATCCGGAGACCACACGCCCCACGAG | + |
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Preference number: 5 (lower is better) Translates to: PSQGGPEHQESCHRP*DCISQPSGDHTPHE Trigger: CTCGTGGGGCGTGTGGTCTCCGGATGGCTGGGAGATGCAGTCCCAGGGCCTGTGACACGACTCCTGATGCTCTGGACCACCTTGACTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS GCA 90 bp | CTGCTGCACCGCGATTCCTATGGAGGCGATCCAGGAGACGCGCGCTaGCTGCTCCTCAAACGCCGCCACAAACTCCACGAAGAAGACCCC | + |
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Preference number: 5 (lower is better) Translates to: LLHRDSYGGDPGDAR*LLLKRRHKLHEEDP Trigger: GGGGTCTTCTTCGTGGAGTTTGTGGCGGCGTTTGAGGAGCAGGCAGCGCGCGTCTCCTGGATCGCCTCCATAGGAATCGCGGTGCAGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000308027.7 ENST00000575844.1 |
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| CDS GCA 90 bp | TGCACCGCGATTCCTATGGAGGCGATCCAGGAGACGCGCGCTGCCTaGTCCTCAAACGCCGCCACAAACTCCACGAAGAAGACCCCAAAG | + |
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Preference number: 5 (lower is better) Translates to: CTAIPMEAIQETRAA*SSNAATNSTKKTPK Trigger: CTTTGGGGTCTTCTTCGTGGAGTTTGTGGCGGCGTTTGAGGAGCAGGCAGCGCGCGTCTCCTGGATCGCCTCCATAGGAATCGCGGTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000308027.7 ENST00000575844.1 |
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| CDS GCA 90 bp | GAAAAAGGGGGCAAATGTGAAGGAGGAGAGGCCCACGCCTGTCAGTaGCAGCCCGGTGGCCAGGGATCGTCGGCGAGAGAAATAACAGGA | + |
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Preference number: 5 (lower is better) Translates to: EKGGKCEGGEAHACQ*QPGGQGSSAREITG Trigger: TCCTGTTATTTCTCTCGCCGACGATCCCTGGCCACCGGGCTGGCACTGACAGGCGTGGGCCTCTCCTCCTTCACATTTGCCCCCTTTTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS CCA 90 bp | GAGCCTGAGCTACAGGGAACAGGGCTAGTGACACCCCAGTCAAGGTaGTCCAGAGCATCAGGAGTCGTGTCACAGGCCCTGGGACTGCAT | + |
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Preference number: 5 (lower is better) Translates to: EPELQGTGLVTPQSR*SRASGVVSQALGLH Trigger: ATGCAGTCCCAGGGCCTGTGACACGACTCCTGATGCTCTGGACCACCTTGACTGGGGTGTCACTAGCCCTGTTCCCTGTAGCTCAGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR CAA 90 bp | CTAGGGGGAGGCAGATCAAGAATCTTAAGGCACTGTGGTTCTGTGGAGACCAAGAGGGTGGAACTGAGTTaGGGCCCCACCCCTGGAGCG | + |
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Preference number: 5 (lower is better) Translates to: LGGGRSRILRHCGSVETKRVELS*GPTPGA Trigger: CGCTCCAGGGGTGGGGCCCAAACTCAGTTCCACCCT...CTTGGTCTCCACAGAACCACAGTGCCTTAAGATTCTTGATCTGCCTCCCCCTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR CAA 90 bp | GGGAGGCAGATCAAGAATCTTAAGGCACTGTGGTTCTGTGGAGACCAAGACGTGGAGGAGAGAGGTGAGTaGGGCCCTGGGACCACCCAC | + |
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Preference number: 5 (lower is better) Translates to: GRQIKNLKALWFCGDQDVEERGE*GPGTTH Trigger: GTGGGTGGTCCCAGGGCCCAACTCACCTCTCTCCTC...CACGTCTTGGTCTCCACAGAACCACAGTGCCTTAAGATTCTTGATCTGCCTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS-3UTR CAA 90 bp | AGGCAGATCAAGAATCTTAAGGCACTGTGGTTCTGTGGAGACCAAGACGTGGCAGGGTTGGCACACACATaGCAGGAGCCCCAGGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: RQIKNLKALWFCGDQDVAGLAHT*QEPQAC Trigger: GCAGGCCTGGGGCTCCTGCAATGTGTGTGCCAACCC...TGCCACGTCTTGGTCTCCACAGAACCACAGTGCCTTAAGATTCTTGATCTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS CCA 90 bp | AAAGCCCAGCCAGAGCCTGACAGCAACCCAATACTCAGGTATAGGTaGGTCAAGGAAGTAGCAAAAGAGGCGAGCAGCATCCCCAGCGCA | + |
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Preference number: 5 (lower is better) Translates to: KAQPEPDSNPILRYR*VKEVAKEASSIPSA Trigger: TGCGCTGGGGATGCTGCTCGCCTCTTTTGCTACTTCCTTGACCCACCTATACCTGAGTATTGGGTTGCTGTCAGGCTCTGGCTGGGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS CCA 90 bp | TGGAGACCAAGACGTGGCAAGAGAAGACCTGGAGCTGTCAAGCTTTaGCTTTCTGGGCCTGACTCTGTGGAGTTCAGTCCTCTTCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: WRPRRGKRRPGAVKL*LSGPDSVEFSPLPA Trigger: GGCTGGAAGAGGACTGAACTCCACAGAGTCAGGCCCAGAAAGCCAAAGCTTGACAGCTCCAGGTCTTCTCTTGCCACGTCTTGGTCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS CCA 90 bp | TTGTGCAGGCTCTCACCTGACAGCAACCCAATACTCAGGTATAGGTaGGTCAAGGAAGTAGCAAAAGAGGCGAGCAGCATCCCCAGCGCA | + |
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Preference number: 5 (lower is better) Translates to: LCRLSPDSNPILRYR*VKEVAKEASSIPSA Trigger: TGCGCTGGGGATGCTGCTCGCCTCTTTTGCTACTTCCTTGACCCACCTATACCTGAGTATTGGGTTGCTGTCAGGTGAGAGCCTGCACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000575844.1 |
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| CDS CCA 90 bp | TTGGGTAGGGGAACTTTAGTATCTAGTGCTTCTGTTACAAGGTCCTaGGGCCCGGAGGTAGTAGTTGAGAAGCAGAAGAAGTGGGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: LGRGTLVSSASVTRS*GPEVVVEKQKKWGR Trigger: CCTGCCCCACTTCTTCTGCTTCTCAACTACTACCTCCGGGCCCCAGGACCTTGTAACAGAAGCACTAGATACTAAAGTTCCCCTACCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS GCA 90 bp | GAGGTGAACATCCAACGATCTAAGCATTTGACTCTCCTGCCCTTGTaGAGGCTCTCACCTGACAGCAACCCAATACTCAGGTATAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: EVNIQRSKHLTLLPL*RLSPDSNPILRYRW Trigger: CCACCTATACCTGAGTATTGGGTTGCTGTCAGGTGAGAGCCTGCACAAGGGCAGGAGAGTCAAATGCTTAGATCGTTGGATGTTCACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000575844.1 |
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| CDS-3UTR CAA 90 bp | AGGCAGATCAAGAATCTTAAGGCACTGTGGTTCTGTGGAGACCAAGACGTGGCATCTTCCAGCCCCTCCTaGGGTAGGGGAACTTTAGTA | + |
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Preference number: 5 (lower is better) Translates to: RQIKNLKALWFCGDQDVASSSPS*GRGTLV Trigger: TACTAAAGTTCCCCTACCCAAGGAGGGGCTGGAAGA...TGCCACGTCTTGGTCTCCACAGAACCACAGTGCCTTAAGATTCTTGATCTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS GCA 72 bp | GCCTCTGCAGGAGCCGGGTTCTGGACGCCGCACCTCTaGACACCCACCCCCGCTGCCGGGTGGCTCGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: ASAGAGFWTPHL*TPTPAAGWLGA Trigger: GGCCCCGAGCCACCCGGCAGCGGGGGTGGGTGTGCAGAGGTGCGGCGTCCAGAACCCGGCTCCTGCAGAGGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000308027.7 ENST00000575844.1 |
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| CDS TCA 72 bp | GAGTCTCCCGGGGGCGTGGTTCCGCGAGCTCGGAGCTaGGCTAGTTCAAGCCGGGGCCGGATCGGTCCCGGT | + |
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Preference number: 6 (lower is better) Translates to: ESPGGVVPRARS*ASSSRGRIGPG Trigger: ACCGGGACCGATCCGGCCCCGGCTTGAACTAGCTCAGCTCCGAGCTCGCGGAACCACGCCCCCGGGAGACTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS CCA 72 bp | AGCCGGGGCCGGATCGGTCCCGGTTCGGTGTTCGGCTaGGAGCCAGAGGGTGGAACTGAGTTTGGGCCCCAC | + |
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Preference number: 6 (lower is better) Translates to: SRGRIGPGSVFG*EPEGGTEFGPH Trigger: GTGGGGCCCAAACTCAGTTCCACCCTCTGGCTCCCAGCCGAACACCGAACCGGGACCGATCCGGCCCCGGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS GCA 72 bp | GGCAAATGTGAAGGAGGAGAGGCCCACGCCTGTCAGTaGCAGCCCGGTGGCCAGGGATCGTCGGCGAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: GKCEGGEAHACQ*QPGGQGSSARE Trigger: TTCTCTCGCCGACGATCCCTGGCCACCGGGCTGGCACTGACAGGCGTGGGCCTCTCCTCCTTCACATTTGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS CCA 72 bp | CTACCGGGCTCCCAAACTGCTGCACCGCGATTCCTATaGAGGCGATCCAGGAGACGCGCGCTGCCTGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LPGSQTAAPRFL*RRSRRRALPAP Trigger: AGGAGCAGGCAGCGCGCGTCTCCTGGATCGCCTCCATAGGAATCGCGGTGCAGCAGTTTGGGAGCCCGGTAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS GCA 72 bp | CGCCAGATCCAGGCGCCGCACTCACTCCCAAACTGCTaGACCGCGATTCCTATGGAGGCGATCCAGGAGACG | + |
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Preference number: 6 (lower is better) Translates to: RQIQAPHSLPNC*TAIPMEAIQET Trigger: CGTCTCCTGGATCGCCTCCATAGGAATCGCGGTGCAGCAGTTTGGGAGTGAGTGCGGCGCCTGGATCTGGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000575844.1 |
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| CDS GCA 72 bp | GTCCGCCAGATCCAGGCGCCGCACTCACTCCCAAACTaGTGCACCGCGATTCCTATGGAGGCGATCCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: VRQIQAPHSLPN*CTAIPMEAIQE Trigger: CTCCTGGATCGCCTCCATAGGAATCGCGGTGCAGCAGTTTGGGAGTGAGTGCGGCGCCTGGATCTGGCGGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000575844.1 |
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| CDS CCA 72 bp | AGGAGGAGAGGCCCACGCCTGTCAGTGCCAGCCCGGTaGCCAGGGATCGTCGGCGAGAGAAATAACAGGACA | + |
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Preference number: 6 (lower is better) Translates to: RRRGPRLSVPAR*PGIVGERNNRT Trigger: TGTCCTGTTATTTCTCTCGCCGACGATCCCTGGCCACCGGGCTGGCACTGACAGGCGTGGGCCTCTCCTCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS CCA 72 bp | GGTGGTCCAGAGCATCAGGAGTCGTGTCACAGGCCCTaGGACTGCATCTCCCAGCCATCCGGAGACCACACG | + |
|
Preference number: 6 (lower is better) Translates to: GGPEHQESCHRP*DCISQPSGDHT Trigger: CGTGTGGTCTCCGGATGGCTGGGAGATGCAGTCCCAGGGCCTGTGACACGACTCCTGATGCTCTGGACCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS CCA 72 bp | CGCACTCACTCCCAAACTGCTGCACCGCGATTCCTATaGAGGCGATCCAGGAGACGCGCGCTGCCTGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: RTHSQTAAPRFL*RRSRRRALPAP Trigger: AGGAGCAGGCAGCGCGCGTCTCCTGGATCGCCTCCATAGGAATCGCGGTGCAGCAGTTTGGGAGTGAGTGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000575844.1 |
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| CDS GCA 72 bp | CGCGATTCCTATGGAGGCGATCCAGGAGACGCGCGCTaGCTGCTCCTCAAACGCCGCCACAAACTCCACGAA | + |
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Preference number: 6 (lower is better) Translates to: RDSYGGDPGDAR*LLLKRRHKLHE Trigger: TTCGTGGAGTTTGTGGCGGCGTTTGAGGAGCAGGCAGCGCGCGTCTCCTGGATCGCCTCCATAGGAATCGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000308027.7 ENST00000575844.1 |
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| CDS CCA 72 bp | CCAAAGGAGCGGAGCACCCCAAACACAAGCGCCGACTaGAAGAACGCTGAGAGCACCACCACCCATCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: PKERSTPNTSAD*KNAESTTTHPQ Trigger: CTGGGGATGGGTGGTGGTGCTCTCAGCGTTCTTCCAGTCGGCGCTTGTGTTTGGGGTGCTCCGCTCCTTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000308027.7 ENST00000575844.1 |
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| CDS GCA 72 bp | GGAAGGCCCCAGCCACCACAAAAGAAGCCGTGTAGTTaGCTGTCACATCCCGGAGGTAGCCTGAGAGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GRPQPPQKKPCS*LSHPGGSLREE Trigger: CTCCTCTCTCAGGCTACCTCCGGGATGTGACAGGCAACTACACGGCTTCTTTTGTGGTGGCTGGGGCCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS CCA 72 bp | CTACAGGGAACAGGGCTAGTGACACCCCAGTCAAGGTaGTCCAGAGCATCAGGAGTCGTGTCACAGGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LQGTGLVTPQSR*SRASGVVSQAL Trigger: CAGGGCCTGTGACACGACTCCTGATGCTCTGGACCACCTTGACTGGGGTGTCACTAGCCCTGTTCCCTGTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS TCA 72 bp | AAGACCTGGAGCTGTCAAGCTTTGGCTTTCTGGGCCTaGCTCTGTGGAGTTCAGTCCTCTTCCAGCCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: KTWSCQALAFWA*LCGVQSSSSPS Trigger: GGAGGGGCTGGAAGAGGACTGAACTCCACAGAGTCAGGCCCAGAAAGCCAAAGCTTGACAGCTCCAGGTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS CCA 72 bp | AGACGTGGCAAGAGAAGACCTGGAGCTGTCAAGCTTTaGCTTTCTGGGCCTGACTCTGTGGAGTTCAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RRGKRRPGAVKL*LSGPDSVEFSP Trigger: AGGACTGAACTCCACAGAGTCAGGCCCAGAAAGCCAAAGCTTGACAGCTCCAGGTCTTCTCTTGCCACGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS CCA 72 bp | CCAGAGCCTGACAGCAACCCAATACTCAGGTATAGGTaGGTCAAGGAAGTAGCAAAAGAGGCGAGCAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: PEPDSNPILRYR*VKEVAKEASSI Trigger: GATGCTGCTCGCCTCTTTTGCTACTTCCTTGACCCACCTATACCTGAGTATTGGGTTGCTGTCAGGCTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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| CDS CAA 72 bp | AGCAGGAAGGAGGTGAACATCCAACGATCTAAGCATTaGACTCTCCTGCCCTTGTGCAGGCTCTCACCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: SRKEVNIQRSKH*TLLPLCRLSPD Trigger: GTCAGGTGAGAGCCTGCACAAGGGCAGGAGAGTCAAATGCTTAGATCGTTGGATGTTCACCTCCTTCCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000575844.1 |
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| CDS CAA 90 bp | TTTGGAAGGAGCAGGAAGGAGGTGAACATCCAACGATCTAAGCATTaGACTCTCCTGCCCTTGTGCAGGCTCTCACCTGACAGCAACCCA | + |
|
Preference number: 6 (lower is better) Translates to: FGRSRKEVNIQRSKH*TLLPLCRLSPDSNP Trigger: TGGGTTGCTGTCAGGTGAGAGCCTGCACAAGGGCAGGAGAGTCAAATGCTTAGATCGTTGGATGTTCACCTCCTTCCTGCTCCTTCCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000575844.1 |
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| CDS CCA 72 bp | CTCTCACCTGACAGCAACCCAATACTCAGGTATAGGTaGGTCAAGGAAGTAGCAAAAGAGGCGAGCAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: LSPDSNPILRYR*VKEVAKEASSI Trigger: GATGCTGCTCGCCTCTTTTGCTACTTCCTTGACCCACCTATACCTGAGTATTGGGTTGCTGTCAGGTGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000575844.1 |
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| CDS CAA 90 bp | AAGGAGGTGAACATCCAACGATCTAAGCATTTGACTCTCCTGCCCTaGTGCAGGCTCTCACCTGACAGCAACCCAATACTCAGGTATAGG | + |
|
Preference number: 6 (lower is better) Translates to: KEVNIQRSKHLTLLP*CRLSPDSNPILRYR Trigger: CCTATACCTGAGTATTGGGTTGCTGTCAGGTGAGAGCCTGCACAAGGGCAGGAGAGTCAAATGCTTAGATCGTTGGATGTTCACCTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000575844.1 |
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| CDS CCA 72 bp | GGAACTTTAGTATCTAGTGCTTCTGTTACAAGGTCCTaGGGCCCGGAGGTAGTAGTTGAGAAGCAGAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GTLVSSASVTRS*GPEVVVEKQKK Trigger: CTTCTTCTGCTTCTCAACTACTACCTCCGGGCCCCAGGACCTTGTAACAGAAGCACTAGATACTAAAGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308027.7 |
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