Pregenerated sensors for SLC16A11 (Homo sapiens)
Ensembl gene IDs: ENSG00000174326Ensembl transcript IDs: ENST00000308009.5, ENST00000447225.1, ENST00000573338.1, ENST00000574600.3, ENST00000662352.3, ENST00000673828.2
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGCTGGACCACAGGAGGGCAGCGCCCTGGGCAACCCTATGTAGATaGAGCTGCCGGAGAGGATCAAAGAACCAGACAGGAGGAAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: RLDHRRAAPWATLCR*SCRRGSKNQTGGKR Trigger: CCTCTTTCCTCCTGTCTGGTTCTTTGATCCTCTCCGGCAGCTTCATCTACATAGGGTTGCCCAGGGCGCTGCCCTCCTGTGGTCCAGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTCCAGAGTGGAGCCAGGGCCTCCTGGGGACAGCAAGACTGCCTGGGGAGCGTCTCTGGGGGAGGCGTaGCTGGAGGGGAGGCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: VSRVEPGPPGDSKTAWGASLGEA*LEGRLD Trigger: GTCCAGCCTCCCCTCCAGCCACGCCTCCCCCAGAGA...CGCTCCCCAGGCAGTCTTGCTGTCCCCAGGAGGCCCTGGCTCCACTCTGGACAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| 3UTR TCA 72 bp | CACAGGAGGGCAGCGCCCTGGGCAACCCTATGTAGATaGAGCTGCCGGAGAGGATCAAAGAACCAGACAGGA | + |
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Preference number: 3 (lower is better) Translates to: HRRAAPWATLCR*SCRRGSKNQTG Trigger: TCCTGTCTGGTTCTTTGATCCTCTCCGGCAGCTTCATCTACATAGGGTTGCCCAGGGCGCTGCCCTCCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS-3UTR TCA 90 bp | TGTCCAGAGTGGAGCCAGGGCCTCCTGGGGACAGCAAGACTGCCTGGGGAGCGGCCGGCAAGCCGCGCGTaGGGCCAGACGCCAGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: CPEWSQGLLGTARLPGERPASRA*GQTPVP Trigger: TGGGACTGGCGTCTGGCCTCACGCGCGGCTTGCCGG...CCGCTCCCCAGGCAGTCTTGCTGTCCCCAGGAGGCCCTGGCTCCACTCTGGACA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS-3UTR GCA 90 bp | TGTCCAGAGTGGAGCCAGGGCCTCCTGGGGACAGCAAGACTGCCTGGGGAGCGGGCGTGCTCAGGGCGCTaGCCACGGGGCTGGCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: CPEWSQGLLGTARLPGERACSGR*PRGWLP Trigger: AGGCAGCCAGCCCCGTGGGCAGCGCCCTGAGCACGC...CCGCTCCCCAGGCAGTCTTGCTGTCCCCAGGAGGCCCTGGCTCCACTCTGGACA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS-3UTR CCA 90 bp | GGTGTCCAGAGTGGAGCCAGGGCCTCCTGGGGACAGCAAGACTGCCTGGGGAGCCGCTGCCCACGGGGCTaGCTGCCTGCTGCACGGCCA | + |
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Preference number: 4 (lower is better) Translates to: GVQSGARASWGQQDCLGSRCPRG*LPAARP Trigger: TGGCCGTGCAGCAGGCAGCCAGCCCCGTGGGCAGCG...GCTCCCCAGGCAGTCTTGCTGTCCCCAGGAGGCCCTGGCTCCACTCTGGACACC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS-3UTR CCA 90 bp | TGTCCAGAGTGGAGCCAGGGCCTCCTGGGGACAGCAAGACTGCCTGGGGAGCGGAGGGGCACCCAGCCTTaGTCTGCCAGCCACCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: CPEWSQGLLGTARLPGERRGTQP*SASHPQ Trigger: CTGCGGGTGGCTGGCAGACCAAGGCTGGGTGCCCCT...CCGCTCCCCAGGCAGTCTTGCTGTCCCCAGGAGGCCCTGGCTCCACTCTGGACA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS-3UTR TCA 90 bp | GGTGTCCAGAGTGGAGCCAGGGCCTCCTGGGGACAGCAAGACTGCCTGGGGAGCAGGGCGGGGGCGAGCTaGAACAGCCAATCCGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: GVQSGARASWGQQDCLGSRAGAS*NSQSGK Trigger: CTTGCCGGATTGGCTGTTTCAGCTCGCCCCCGCCCT...GCTCCCCAGGCAGTCTTGCTGTCCCCAGGAGGCCCTGGCTCCACTCTGGACACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS-3UTR TCA 90 bp | TGGACCACAGGAGGGCAGCGCCCTGGGCAACCCTATGTAGATGAAGCTGCCGGAATCACCACAGGGGCCTaGGCCACCTGGGACGCGGGG | + |
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Preference number: 4 (lower is better) Translates to: WTTGGQRPGQPYVDEAAGITTGA*ATWDAG Trigger: CCCCGCGTCCCAGGTGGCTCAGGCCCCTGTGGTGAT...TCCGGCAGCTTCATCTACATAGGGTTGCCCAGGGCGCTGCCCTCCTGTGGTCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS-3UTR TCA 90 bp | TGGACCACAGGAGGGCAGCGCCCTGGGCAACCCTATGTAGATGAAGCTGCCGGAAGAAGGCCCGGCGTGTaGACAGACTCAGGCCGAGGG | + |
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Preference number: 4 (lower is better) Translates to: WTTGGQRPGQPYVDEAAGRRPGV*TDSGRG Trigger: CCCTCGGCCTGAGTCTGTTCACACGCCGGGCCTTCT...TCCGGCAGCTTCATCTACATAGGGTTGCCCAGGGCGCTGCCCTCCTGTGGTCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS-3UTR GCA 90 bp | GGTGTCCAGAGTGGAGCCAGGGCCTCCTGGGGACAGCAAGACTGCCTGGGGAGCGCGCTTCGGTCAAAGTaGTCGGCAAGGTCAGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: GVQSGARASWGQQDCLGSALRSK*SARSGK Trigger: CTTCCCTGACCTTGCCGAGCACTTTGACCGAAGCGC...GCTCCCCAGGCAGTCTTGCTGTCCCCAGGAGGCCCTGGCTCCACTCTGGACACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS-3UTR CCA 90 bp | TGTCCAGAGTGGAGCCAGGGCCTCCTGGGGACAGCAAGACTGCCTGGGGAGCGGATCCACGCAGTGTCCTaGGCGCTTCGGTCAAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: CPEWSQGLLGTARLPGERIHAVS*ALRSKC Trigger: GCACTTTGACCGAAGCGCCCAGGACACTGCGTGGAT...CCGCTCCCCAGGCAGTCTTGCTGTCCCCAGGAGGCCCTGGCTCCACTCTGGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS-3UTR CCA 90 bp | GTGTCCAGAGTGGAGCCAGGGCCTCCTGGGGACAGCAAGACTGCCTGGGGAGCGCGATGGAGCCCAACTTaGACGGGCTCTCTCGGTAAA | + |
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Preference number: 4 (lower is better) Translates to: VSRVEPGPPGDSKTAWGARWSPT*TGSLGK Trigger: TTTACCGAGAGAGCCCGTCCAAGTTGGGCTCCATCG...CGCTCCCCAGGCAGTCTTGCTGTCCCCAGGAGGCCCTGGCTCCACTCTGGACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS-3UTR CCA 90 bp | TGTCCAGAGTGGAGCCAGGGCCTCCTGGGGACAGCAAGACTGCCTGGGGAGCGGGATGCAGCAGATCGCTaGCGAAAGCCGAGAAGACGA | + |
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Preference number: 4 (lower is better) Translates to: CPEWSQGLLGTARLPGERDAADR*RKPRRR Trigger: TCGTCTTCTCGGCTTTCGCCAGCGATCTGCTGCATC...CCGCTCCCCAGGCAGTCTTGCTGTCCCCAGGAGGCCCTGGCTCCACTCTGGACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS-3UTR TCA 90 bp | GGCTCAAACAAGAAAATAATCAACAAGTGGTGTCCAGAGTGGAGCCAGGGCCTCAGGCCCCGTTGCCGGTaGGCGCCAGCCCCACCGCCA | + |
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Preference number: 4 (lower is better) Translates to: GSNKKIINKWCPEWSQGLRPRCR*APAPPP Trigger: TGGCGGTGGGGCTGGCGCTCACCGGCAACGGGGCCT...GAGGCCCTGGCTCCACTCTGGACACCACTTGTTGATTATTTTCTTGTTTGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS-3UTR GCA 90 bp | GATGAAGCTGCCGGAGAGGATCAAAGAACCAGACAGGAGGAAAGAGGCGGTGAAGACCTCTCCGGGCGGTaGGGGGAGGGGAAGGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: DEAAGEDQRTRQEERGGEDLSGR*GEGKGE Trigger: CTCACCCTTCCCCTCCCCGCACCGCCCGGAGAGGTC...TTCACCGCCTCTTTCCTCCTGTCTGGTTCTTTGATCCTCTCCGGCAGCTTCATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS-3UTR TCA 90 bp | AAACAAGAAAATAATCAACAAGTGGTGTCCAGAGTGGAGCCAGGGCCTCCTGGGCCAGGGCCAGGGCGCTaGTCCACGCAGTGTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: KQENNQQVVSRVEPGPPGPGPGR*STQCPG Trigger: CCCAGGACACTGCGTGGATCAGCGCCCTGGCCCTGG...CCCAGGAGGCCCTGGCTCCACTCTGGACACCACTTGTTGATTATTTTCTTGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS-3UTR TCA 90 bp | TGGACCACAGGAGGGCAGCGCCCTGGGCAACCCTATGTAGATGAAGCTGCCGGAGCAACCCTATGTAGATaGAGCTGCCGGAGAGGATCA | + |
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Preference number: 4 (lower is better) Translates to: WTTGGQRPGQPYVDEAAGATLCR*SCRRGS Trigger: TGATCCTCTCCGGCAGCTTCATCTACATAGGGTTGC...TCCGGCAGCTTCATCTACATAGGGTTGCCCAGGGCGCTGCCCTCCTGTGGTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS-3UTR GCA 90 bp | GATGAAGCTGCCGGAGAGGATCAAAGAACCAGACAGGAGGAAAGAGGCGGTGAAGTTTATCGCGAAGGCTaGGGCCGCCACCACCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: DEAAGEDQRTRQEERGGEVYREG*GRHHPA Trigger: GGCTGGGTGGTGGCGGCCGCAGCCTTCGCGATAAAC...TTCACCGCCTCTTTCCTCCTGTCTGGTTCTTTGATCCTCTCCGGCAGCTTCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS-3UTR GCA 90 bp | ATGAAGCTGCCGGAGAGGATCAAAGAACCAGACAGGAGGAAAGAGGCGGTGAAGAGTAACGCGAGAGGGTaGCTAGGGCGGGGGCGAACA | + |
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Preference number: 4 (lower is better) Translates to: MKLPERIKEPDRRKEAVKSNARG*LGRGRT Trigger: TGTTCGCCCCCGCCCTAGGCACCCTCTCGCGTTACT...CTTCACCGCCTCTTTCCTCCTGTCTGGTTCTTTGATCCTCTCCGGCAGCTTCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS-3UTR GCA 90 bp | AAACAAGAAAATAATCAACAAGTGGTGTCCAGAGTGGAGCCAGGGCCTCCTGGGACCAGCCCTGTGGCCTaGACCACACCTCCGACGCCC | + |
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Preference number: 4 (lower is better) Translates to: KQENNQQVVSRVEPGPPGTSPVA*TTPPTP Trigger: GGGCGTCGGAGGTGTGGTGCAGGCCACAGGGCTGGT...CCCAGGAGGCCCTGGCTCCACTCTGGACACCACTTGTTGATTATTTTCTTGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS-3UTR CCA 90 bp | TATGTAGATGAAGCTGCCGGAGAGGATCAAAGAACCAGACAGGAGGAAAGAGGCCCACAGGGGGTGAGGTaGAGGGTGATCGCGCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: YVDEAAGEDQRTRQEERGPQGVR*RVIAPR Trigger: CCTCGGCGCGATCACCCTCCACCTCACCCCCTGTGG...GCCTCTTTCCTCCTGTCTGGTTCTTTGATCCTCTCCGGCAGCTTCATCTACATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS-3UTR CCA 90 bp | GGCTCAAACAAGAAAATAATCAACAAGTGGTGTCCAGAGTGGAGCCAGGGCCTCTCTCTGGGGGAGGCGTaGCTGGAGGGGAGGCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: GSNKKIINKWCPEWSQGLSLGEA*LEGRLD Trigger: GTCCAGCCTCCCCTCCAGCCACGCCTCCCCCAGAGA...GAGGCCCTGGCTCCACTCTGGACACCACTTGTTGATTATTTTCTTGTTTGAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS-3UTR CCA 90 bp | GATGAAGCTGCCGGAGAGGATCAAAGAACCAGACAGGAGGAAAGAGGCGGTGAAGACAGCAAGACTGCCTaGGGAGCGGGAAGCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: DEAAGEDQRTRQEERGGEDSKTA*GAGSSS Trigger: GGAGCTGCTTCCCGCTCCCCAGGCAGTCTTGCTGTC...TTCACCGCCTCTTTCCTCCTGTCTGGTTCTTTGATCCTCTCCGGCAGCTTCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS-3UTR CCA 90 bp | GATGAAGCTGCCGGAGAGGATCAAAGAACCAGACAGGAGGAAAGAGGCGGTGAATCATCACCAGCCCTGTaGCCTGCACCACACCTCCGA | + |
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Preference number: 4 (lower is better) Translates to: DEAAGEDQRTRQEERGGESSPAL*PAPHLR Trigger: TCGGAGGTGTGGTGCAGGCCACAGGGCTGGTGATGA...TTCACCGCCTCTTTCCTCCTGTCTGGTTCTTTGATCCTCTCCGGCAGCTTCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS-3UTR CCA 90 bp | AAACAAGAAAATAATCAACAAGTGGTGTCCAGAGTGGAGCCAGGGCCTCCTGGGGGAGCCAGGGCCTCCTaGGGACAGCAAGACTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: KQENNQQVVSRVEPGPPGGARAS*GQQDCL Trigger: CAGGCAGTCTTGCTGTCCCCAGGAGGCCCTGGCTCC...CCCAGGAGGCCCTGGCTCCACTCTGGACACCACTTGTTGATTATTTTCTTGTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS-3UTR GCA 90 bp | TCAAACAAGAAAATAATCAACAAGTGGTGTCCAGAGTGGAGCCAGGGCCTCCTGCACCCAGCCTTGGTCTaGCAGCCACCCGCAGACCAG | + |
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Preference number: 4 (lower is better) Translates to: SNKKIINKWCPEWSQGLLHPALV*QPPADQ Trigger: CTGGTCTGCGGGTGGCTGGCAGACCAAGGCTGGGTG...CAGGAGGCCCTGGCTCCACTCTGGACACCACTTGTTGATTATTTTCTTGTTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS-3UTR CCA 90 bp | CTCAAACAAGAAAATAATCAACAAGTGGTGTCCAGAGTGGAGCCAGGGCCTCCTGAGCGAGGGCAGCGATaGAGCCCAACTTGGACGGGC | + |
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Preference number: 4 (lower is better) Translates to: LKQENNQQVVSRVEPGPPERGQR*SPTWTG Trigger: GCCCGTCCAAGTTGGGCTCCATCGCTGCCCTCGCTC...AGGAGGCCCTGGCTCCACTCTGGACACCACTTGTTGATTATTTTCTTGTTTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS-3UTR GCA 90 bp | TCAAACAAGAAAATAATCAACAAGTGGTGTCCAGAGTGGAGCCAGGGCCTCCTGTGGGGACAGCAAGACTaGCTGGGGAGCGGGAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: SNKKIINKWCPEWSQGLLWGQQD*LGSGKQ Trigger: CTGCTTCCCGCTCCCCAGGCAGTCTTGCTGTCCCCA...CAGGAGGCCCTGGCTCCACTCTGGACACCACTTGTTGATTATTTTCTTGTTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS-3UTR CCA 90 bp | TCAAACAAGAAAATAATCAACAAGTGGTGTCCAGAGTGGAGCCAGGGCCTCCTGAAGTGGTGTCCAGAGTaGAGCCAGGGCCTCCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: SNKKIINKWCPEWSQGLLKWCPE*SQGLLG Trigger: CCCCAGGAGGCCCTGGCTCCACTCTGGACACCACTT...CAGGAGGCCCTGGCTCCACTCTGGACACCACTTGTTGATTATTTTCTTGTTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS-3UTR GCA 90 bp | TCAAACAAGAAAATAATCAACAAGTGGTGTCCAGAGTGGAGCCAGGGCCTCCTGGTATCGAGAAGAAGCTaGAAGGCGGGCGCCAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: SNKKIINKWCPEWSQGLLVSRRS*KAGARS Trigger: GCTCCTGGCGCCCGCCTTGCAGCTTCTTCTCGATAC...CAGGAGGCCCTGGCTCCACTCTGGACACCACTTGTTGATTATTTTCTTGTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS-3UTR GCA 90 bp | GGCTCAAACAAGAAAATAATCAACAAGTGGTGTCCAGAGTGGAGCCAGGGCCTCCCCCAACCAGGGCTGTaGCTAGAGCAAAGATTGAGA | + |
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Preference number: 4 (lower is better) Translates to: GSNKKIINKWCPEWSQGLPQPGL*LEQRLR Trigger: TCTCAATCTTTGCTCTAGGCACAGCCCTGGTTGGGG...GAGGCCCTGGCTCCACTCTGGACACCACTTGTTGATTATTTTCTTGTTTGAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS-3UTR CCA 90 bp | GGCTCAAACAAGAAAATAATCAACAAGTGGTGTCCAGAGTGGAGCCAGGGCCTCGGAAGCCTGAGGAGATaGGTAAGGGCATTTAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: GSNKKIINKWCPEWSQGLGSLRR*VRAFRS Trigger: GCTTCTAAATGCCCTTACCCATCTCCTCAGGCTTCC...GAGGCCCTGGCTCCACTCTGGACACCACTTGTTGATTATTTTCTTGTTTGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS-3UTR TCA 90 bp | GGCTCAAACAAGAAAATAATCAACAAGTGGTGTCCAGAGTGGAGCCAGGGCCTCCAGTCCCACGGGGATTaGATTATGTACACACACAAC | + |
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Preference number: 4 (lower is better) Translates to: GSNKKIINKWCPEWSQGLQSHGD*IMYTHN Trigger: GTTGTGTGTGTACATAATTCAATCCCCGTGGGACTG...GAGGCCCTGGCTCCACTCTGGACACCACTTGTTGATTATTTTCTTGTTTGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS-3UTR CCA 90 bp | TATGTAGATGAAGCTGCCGGAGAGGATCAAAGAACCAGACAGGAGGAAAGAGGCAAAATAATCAACAAGTaGTGTCCAGAGTGGAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: YVDEAAGEDQRTRQEERGKIINK*CPEWSQ Trigger: CTGGCTCCACTCTGGACACCACTTGTTGATTATTTT...GCCTCTTTCCTCCTGTCTGGTTCTTTGATCCTCTCCGGCAGCTTCATCTACATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS CCA 90 bp | CCGTCACTCCGAGCGCGATGGCGCGGGGCGGAGGGAGCCGGAGCCTaGCCTAGGGCTGGAACTCCCGGGTCCGCGCGAGGTACGGGGACG | + |
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Preference number: 5 (lower is better) Translates to: PSLRARWRGAEGAGA*PRAGTPGSARGTGT Trigger: CGTCCCCGTACCTCGCGCGGACCCGGGAGTTCCAGCCCTAGGCCAGGCTCCGGCTCCCTCCGCCCCGCGCCATCGCGCTCGGAGTGACGG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000308009.5 ENST00000447225.1 ENST00000662352.3 |
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| CDS CCA 90 bp | GCCTGTGCTTCCGCTGGGGAGCTGGCATCCCTGAGATCCAGCCTCTaGCTGCTCGCCCGGGGTGGGCCCGTCACTCCGAGCGCGATGGCG | + |
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Preference number: 5 (lower is better) Translates to: ACASAGELASLRSSL*LLARGGPVTPSAMA Trigger: CGCCATCGCGCTCGGAGTGACGGGCCCACCCCGGGCGAGCAGCCAGAGGCTGGATCTCAGGGATGCCAGCTCCCCAGCGGAAGCACAGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000308009.5 ENST00000447225.1 ENST00000662352.3 |
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| CDS-3UTR CAA 90 bp | GGTGTCCAGAGTGGAGCCAGGGCCTCCTGGGGACAGCAAGACTGCCTGGGGAGCAGCGAGGAGGCCCCGTaGCCGGTGAGCGCCAGCCCC | + |
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Preference number: 5 (lower is better) Translates to: GVQSGARASWGQQDCLGSSEEAP*PVSASP Trigger: GGGGCTGGCGCTCACCGGCAACGGGGCCTCCTCGCT...GCTCCCCAGGCAGTCTTGCTGTCCCCAGGAGGCCCTGGCTCCACTCTGGACACC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS TCA 90 bp | CCTGAGCCACCTGGGACGCGGGGTGTACGGAGGGCGGGGGCGAGCTaGAACAGCCAATCCGGCAAGCCGCGCGTGAGGCCAGACGCCAGT | + |
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Preference number: 5 (lower is better) Translates to: PEPPGTRGVRRAGAS*NSQSGKPRVRPDAS Trigger: ACTGGCGTCTGGCCTCACGCGCGGCTTGCCGGATTGGCTGTTTCAGCTCGCCCCCGCCCTCCGTACACCCCGCGTCCCAGGTGGCTCAGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000574600.3 ENST00000662352.3 ENST00000673828.2 |
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| CDS TCA 90 bp | AGAGAAGCCTCCACGCCTGTGCTTCCGCTGGGGAGCTGGCATCCCTaGGATCCAGCCTCTGGCTGCTCGCCCGGGGTGGGCCCGTCACTC | + |
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Preference number: 5 (lower is better) Translates to: REASTPVLPLGSWHP*DPASGCSPGVGPSL Trigger: GAGTGACGGGCCCACCCCGGGCGAGCAGCCAGAGGCTGGATCTCAGGGATGCCAGCTCCCCAGCGGAAGCACAGGCGTGGAGGCTTCTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000308009.5 ENST00000447225.1 ENST00000662352.3 |
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| CDS GCA 90 bp | GCCCCACCGCCAAGACTCGACGGCGGGAGAAGTAACGCGAGAGGGTaGCTAGGGCGGGGGCGAACACCAGGGCCCAACCAAAGCCAGCGA | + |
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Preference number: 5 (lower is better) Translates to: APPPRLDGGRSNARG*LGRGRTPGPNQSQR Trigger: TCGCTGGCTTTGGTTGGGCCCTGGTGTTCGCCCCCGCCCTAGGCACCCTCTCGCGTTACTTCTCCCGCCGTCGAGTCTTGGCGGTGGGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000308009.5 ENST00000447225.1 ENST00000574600.3 ENST00000662352.3 ENST00000673828.2 |
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| CDS CCA 90 bp | GCCTGCTGCACGGCCAGGGCCAGGGCGCTGATCCACGCAGTGTCCTaGGCGCTTCGGTCAAAGTGCTCGGCAAGGTCAGGGAAGGCAAGG | + |
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Preference number: 5 (lower is better) Translates to: ACCTARARALIHAVS*ALRSKCSARSGKAR Trigger: CCTTGCCTTCCCTGACCTTGCCGAGCACTTTGACCGAAGCGCCCAGGACACTGCGTGGATCAGCGCCCTGGCCCTGGCCGTGCAGCAGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000308009.5 ENST00000447225.1 ENST00000573338.1 ENST00000574600.3 ENST00000662352.3 ENST00000673828.2 |
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| CDS CCA 90 bp | AGCCAGCGAGGAGGCCCAGGCCGAGGTAGAGATGCAGCAGATCGCTaGCGAAAGCCGAGAAGACGAAGCCCAGCGAGGCGAGGACGCCCC | + |
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Preference number: 5 (lower is better) Translates to: SQRGGPGRGRDAADR*RKPRRRSPARRGRP Trigger: GGGGCGTCCTCGCCTCGCTGGGCTTCGTCTTCTCGGCTTTCGCCAGCGATCTGCTGCATCTCTACCTCGGCCTGGGCCTCCTCGCTGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000308009.5 ENST00000447225.1 ENST00000573338.1 ENST00000574600.3 ENST00000662352.3 ENST00000673828.2 |
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| CDS TCA 90 bp | CAACCAGGGCTGTGCCTAGAGCAAAGATTGAGAAGGCCCGGCGTGTaGACAGACTCAGGCCGAGGGCAGCTAGGGGACTACGCGGTGGGG | + |
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Preference number: 5 (lower is better) Translates to: QPGLCLEQRLRRPGV*TDSGRGQLGDYAVG Trigger: CCCCACCGCGTAGTCCCCTAGCTGCCCTCGGCCTGAGTCTGTTCACACGCCGGGCCTTCTCAATCTTTGCTCTAGGCACAGCCCTGGTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000308009.5 ENST00000447225.1 ENST00000574600.3 ENST00000662352.3 ENST00000673828.2 |
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| CDS TCA 90 bp | GGAGGGCGGGGGCGAGCTGAAACAGCCAATCCGGCAAGCCGCGCGTaGGGCCAGACGCCAGTCCCACGGGGATTGAATTATGTACACACA | + |
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Preference number: 5 (lower is better) Translates to: GGRGRAETANPASRA*GQTPVPRGLNYVHT Trigger: TGTGTGTACATAATTCAATCCCCGTGGGACTGGCGTCTGGCCTCACGCGCGGCTTGCCGGATTGGCTGTTTCAGCTCGCCCCCGCCCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000574600.3 ENST00000662352.3 ENST00000673828.2 |
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| CDS CCA 90 bp | TTTTCTAGAGCCGGTTGCCCTTTCTCAGGTTGTCGGGTAATCAGGTaGGTCTCCCATCCCTCCACTCACGGCTCCTCCTCCCCGTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: FSRAGCPFSGCRVIR*VSHPSTHGSSSPFL Trigger: CAGGAACGGGGAGGAGGAGCCGTGAGTGGAGGGATGGGAGACCCACCTGATTACCCGACAACCTGAGAAAGGGCAACCGGCTCTAGAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573338.1 |
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| CDS TCA 90 bp | AGCTGCCGGAGAGGATCAAAGAACCAGACAGGAGGAAAGAGGCGGTaGAGTCTCCTGTCTCATCCCTTAGGAAGCCTGACAGGGGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: SCRRGSKNQTGGKRR*SLLSHPLGSLTGEG Trigger: GCCCTCCCCTGTCAGGCTTCCTAAGGGATGAGACAGGAGACTTCACCGCCTCTTTCCTCCTGTCTGGTTCTTTGATCCTCTCCGGCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000308009.5 ENST00000447225.1 ENST00000574600.3 ENST00000662352.3 |
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| CDS TCA 90 bp | AGCTGCCGGAGAGGATCAAAGAACCAGACAGGAGGAAAGAGGCGGTaGAGTCTCCTGTCTCATCCCTTAGGAAGCCAGCGAGGAGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: SCRRGSKNQTGGKRR*SLLSHPLGSQRGGP Trigger: TGGGCCTCCTCGCTGGCTTCCTAAGGGATGAGACAGGAGACTTCACCGCCTCTTTCCTCCTGTCTGGTTCTTTGATCCTCTCCGGCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573338.1 |
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| CDS-3UTR CAA 90 bp | TCAAACAAGAAAATAATCAACAAGTGGTGTCCAGAGTGGAGCCAGGGCCTCCTGGAGGGGCACCCAGCCTaGGTCTGCCAGCCACCCGCA | + |
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Preference number: 5 (lower is better) Translates to: SNKKIINKWCPEWSQGLLEGHPA*VCQPPA Trigger: TGCGGGTGGCTGGCAGACCAAGGCTGGGTGCCCCTC...CAGGAGGCCCTGGCTCCACTCTGGACACCACTTGTTGATTATTTTCTTGTTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS-3UTR CAA 90 bp | ATGAAGCTGCCGGAGAGGATCAAAGAACCAGACAGGAGGAAAGAGGCGGTGAAGCCAGTCCCACGGGGATaGAATTATGTACACACACAA | + |
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Preference number: 5 (lower is better) Translates to: MKLPERIKEPDRRKEAVKPVPRG*NYVHTQ Trigger: TTGTGTGTGTACATAATTCAATCCCCGTGGGACTGG...CTTCACCGCCTCTTTCCTCCTGTCTGGTTCTTTGATCCTCTCCGGCAGCTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673828.2 |
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| CDS TCA 90 bp | TTCTCATTGGCTGTTTGCCTCCCTCGAACTAATGGTTCTTCTCCTTaGCCTCAAGATGCACTCTTTTCTAGAGCCGGTTGCCCTTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: FSLAVCLPRTNGSSP*PQDALFSRAGCPFS Trigger: TGAGAAAGGGCAACCGGCTCTAGAAAAGAGTGCATCTTGAGGTCAAGGAGAAGAACCATTAGTTCGAGGGAGGCAAACAGCCAATGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573338.1 |
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| CDS TCA 72 bp | CCTGGGACGCGGGGTGTACGGAGGGCGGGGGCGAGCTaGAACAGCCAATCCGGCAAGCCGCGCGTGAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: PGTRGVRRAGAS*NSQSGKPRVRP Trigger: TGGCCTCACGCGCGGCTTGCCGGATTGGCTGTTTCAGCTCGCCCCCGCCCTCCGTACACCCCGCGTCCCAGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000574600.3 ENST00000662352.3 ENST00000673828.2 |
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| CDS CCA 72 bp | ACCAGGGGTAGCAGCAGGGCGCCACAGGGGGTGAGGTaGAGGGTGATCGCGCCGAGGAGGAGCAGAGCGCCC | + |
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Preference number: 6 (lower is better) Translates to: TRGSSRAPQGVR*RVIAPRRSRAP Trigger: GGGCGCTCTGCTCCTCCTCGGCGCGATCACCCTCCACCTCACCCCCTGTGGCGCCCTGCTGCTACCCCTGGT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000308009.5 ENST00000447225.1 ENST00000574600.3 ENST00000662352.3 ENST00000673828.2 |
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| CDS TCA 72 bp | TCCACGCCTGTGCTTCCGCTGGGGAGCTGGCATCCCTaGGATCCAGCCTCTGGCTGCTCGCCCGGGGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: STPVLPLGSWHP*DPASGCSPGVG Trigger: GCCCACCCCGGGCGAGCAGCCAGAGGCTGGATCTCAGGGATGCCAGCTCCCCAGCGGAAGCACAGGCGTGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000308009.5 ENST00000447225.1 ENST00000662352.3 |
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| CDS CCA 72 bp | ACGGCCAGGGCCAGGGCGCTGATCCACGCAGTGTCCTaGGCGCTTCGGTCAAAGTGCTCGGCAAGGTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: TARARALIHAVS*ALRSKCSARSG Trigger: CCCTGACCTTGCCGAGCACTTTGACCGAAGCGCCCAGGACACTGCGTGGATCAGCGCCCTGGCCCTGGCCGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000308009.5 ENST00000447225.1 ENST00000573338.1 ENST00000574600.3 ENST00000662352.3 ENST00000673828.2 |
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| CDS TCA 72 bp | GCCGCGCGTGAGGCCAGACGCCAGTCCCACGGGGATTaGATTATGTACACACACAACCCCCAGGCCCGGGGG | + |
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Preference number: 6 (lower is better) Translates to: AAREARRQSHGD*IMYTHNPQARG Trigger: CCCCCGGGCCTGGGGGTTGTGTGTGTACATAATTCAATCCCCGTGGGACTGGCGTCTGGCCTCACGCGCGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000574600.3 ENST00000662352.3 ENST00000673828.2 |
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| CDS GCA 72 bp | CCAAGACTCGACGGCGGGAGAAGTAACGCGAGAGGGTaGCTAGGGCGGGGGCGAACACCAGGGCCCAACCAA | + |
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Preference number: 6 (lower is better) Translates to: PRLDGGRSNARG*LGRGRTPGPNQ Trigger: TTGGTTGGGCCCTGGTGTTCGCCCCCGCCCTAGGCACCCTCTCGCGTTACTTCTCCCGCCGTCGAGTCTTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000308009.5 ENST00000447225.1 ENST00000574600.3 ENST00000662352.3 ENST00000673828.2 |
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| CDS CCA 72 bp | GGAGGCCCAGGCCGAGGTAGAGATGCAGCAGATCGCTaGCGAAAGCCGAGAAGACGAAGCCCAGCGAGGCGA | + |
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Preference number: 6 (lower is better) Translates to: GGPGRGRDAADR*RKPRRRSPARR Trigger: TCGCCTCGCTGGGCTTCGTCTTCTCGGCTTTCGCCAGCGATCTGCTGCATCTCTACCTCGGCCTGGGCCTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000308009.5 ENST00000447225.1 ENST00000573338.1 ENST00000574600.3 ENST00000662352.3 ENST00000673828.2 |
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| CDS TCA 72 bp | GGGCGAGCTGAAACAGCCAATCCGGCAAGCCGCGCGTaGGGCCAGACGCCAGTCCCACGGGGATTGAATTAT | + |
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Preference number: 6 (lower is better) Translates to: GRAETANPASRA*GQTPVPRGLNY Trigger: ATAATTCAATCCCCGTGGGACTGGCGTCTGGCCTCACGCGCGGCTTGCCGGATTGGCTGTTTCAGCTCGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000574600.3 ENST00000662352.3 ENST00000673828.2 |
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| CDS CCA 72 bp | CCCGAAGGGGAGCGAGGGCAGCGATGGAGCCCAACTTaGACGGGCTCTCTCGGTAAACAGAGATCACCACAG | + |
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Preference number: 6 (lower is better) Translates to: PEGERGQRWSPT*TGSLGKQRSPQ Trigger: CTGTGGTGATCTCTGTTTACCGAGAGAGCCCGTCCAAGTTGGGCTCCATCGCTGCCCTCGCTCCCCTTCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000574600.3 ENST00000662352.3 ENST00000673828.2 |
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| CDS CCA 72 bp | GCCGGTTGCCCTTTCTCAGGTTGTCGGGTAATCAGGTaGGTCTCCCATCCCTCCACTCACGGCTCCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: AGCPFSGCRVIR*VSHPSTHGSSS Trigger: GGAGGAGGAGCCGTGAGTGGAGGGATGGGAGACCCACCTGATTACCCGACAACCTGAGAAAGGGCAACCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573338.1 |
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| CDS TCA 72 bp | CTGTGCCTAGAGCAAAGATTGAGAAGGCCCGGCGTGTaGACAGACTCAGGCCGAGGGCAGCTAGGGGACTAC | + |
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Preference number: 6 (lower is better) Translates to: LCLEQRLRRPGV*TDSGRGQLGDY Trigger: GTAGTCCCCTAGCTGCCCTCGGCCTGAGTCTGTTCACACGCCGGGCCTTCTCAATCTTTGCTCTAGGCACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000308009.5 ENST00000447225.1 ENST00000574600.3 ENST00000662352.3 ENST00000673828.2 |
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| CDS TCA 72 bp | GCTGTTTGCCTCCCTCGAACTAATGGTTCTTCTCCTTaGCCTCAAGATGCACTCTTTTCTAGAGCCGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: AVCLPRTNGSSP*PQDALFSRAGC Trigger: GCAACCGGCTCTAGAAAAGAGTGCATCTTGAGGTCAAGGAGAAGAACCATTAGTTCGAGGGAGGCAAACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573338.1 |
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