RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC16A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000155380, ENSG00000281917

Ensembl transcript IDs: ENST00000369626.8, ENST00000429288.2, ENST00000443580.6, ENST00000458229.6, ENST00000478835.1, ENST00000481750.1, ENST00000538576.5, ENST00000627031.1, ENST00000627457.1, ENST00000628110.2, ENST00000629508.2, ENST00000629920.2, ENST00000630362.4, ENST00000679803.1, ENST00000679846.1

Found 321 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCAAACTaGGGCCAAGCCTGCCAATACTCTCAGCAGCAGTTTTCTCCTCTA +
Preference number: 1 (lower is better)
Translates to: QRLQTWVQRKLQSPN*GQACQYSQQQFSPL
Trigger: TAGAGGAGAAAACTGCTGCTGAGAGTATTGGCAGGCTTGGCCTCAGTTTGGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR TCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCTTCCTCTATCTGCCATaGTGCCCAGGCATACAAAGG +
Preference number: 2 (lower is better)
Translates to: EKKYAEVTDLGPKKITESFLYLP*CPGIQR
Trigger: CCTTTGTATGCCTGGGCATCATGGCAGATAGAGGAA...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR GCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCCACTCTTCCTCTATCTaGCATGATGCCCAGGCATAC +
Preference number: 2 (lower is better)
Translates to: EKKYAEVTDLGPKKITESHSSSI*HDAQAY
Trigger: GTATGCCTGGGCATCATGGCAGATAGAGGAAGAGTG...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR TCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGATTCCTCTATCTGCCATaGTGCCCAGGCATACAAAGG +
Preference number: 2 (lower is better)
Translates to: KREEVRRGYRLGSKENYRFLYLP*CPGIQR
Trigger: CCTTTGTATGCCTGGGCATCATGGCAGATAGAGGAA...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR GCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGACACTCTTCCTCTATCTaGCATGATGCCCAGGCATAC +
Preference number: 2 (lower is better)
Translates to: KREEVRRGYRLGSKENYRHSSSI*HDAQAY
Trigger: GTATGCCTGGGCATCATGGCAGATAGAGGAAGAGTG...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR TCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCAGATATCCTGGGTCATaGACTGCTCAATTTACCCTT +
Preference number: 2 (lower is better)
Translates to: EKKYAEVTDLGPKKITESRYPGS*TAQFTL
Trigger: AAGGGTAAATTGAGCAGTTCATGACCCAGGATATCT...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR TCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGACCAAGAAAAGGTACCTaGGAGGGGTTGACAAGTACA +
Preference number: 2 (lower is better)
Translates to: KREEVRRGYRLGSKENYRPRKGT*EGLTST
Trigger: TGTACTTGTCAACCCCTCTCAGGTACCTTTTCTTGG...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR GCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCTATTCGTTTGCCTGGTaGCAAATTTTTCTGGCCCTT +
Preference number: 2 (lower is better)
Translates to: EKKYAEVTDLGPKKITESYSFAW*QIFLAL
Trigger: AAGGGCCAGAAAAATTTGGCACCAGGCAAACGAATA...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR GCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCTTCCTTAAGGTTAACTaGTCTGGATGCTCTCAGTTC +
Preference number: 2 (lower is better)
Translates to: EKKYAEVTDLGPKKITESFLKVN*SGCSQF
Trigger: GAACTGAGAGCATCCAGAGCAGTTAACCTTAAGGAA...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR CCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCTTACAGTTTTCATTCTaGTCCACCTTCCCTCCTTAT +
Preference number: 2 (lower is better)
Translates to: EKKYAEVTDLGPKKITESLQFSF*STFPPY
Trigger: ATAAGGAGGGAAGGTGGACCAGAATGAAAACTGTAA...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR TCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAAGATATCCTGGGTCATaGACTGCTCAATTTACCCTT +
Preference number: 2 (lower is better)
Translates to: KREEVRRGYRLGSKENYRRYPGS*TAQFTL
Trigger: AAGGGTAAATTGAGCAGTTCATGACCCAGGATATCT...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR TCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATTTCCTCTATCTGCCATaGTGCCCAGGCATACAAAGG +
Preference number: 2 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHFLYLP*CPGIQR
Trigger: CCTTTGTATGCCTGGGCATCATGGCAGATAGAGGAA...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR TCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATTTACAGAGTCCAAACTaGGGCCAAGCCTGCCAATAC +
Preference number: 2 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHLQSPN*GQACQY
Trigger: GTATTGGCAGGCTTGGCCTCAGTTTGGACTCTGTAA...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR GCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGATATTCGTTTGCCTGGTaGCAAATTTTTCTGGCCCTT +
Preference number: 2 (lower is better)
Translates to: KREEVRRGYRLGSKENYRYSFAW*QIFLAL
Trigger: AAGGGCCAGAAAAATTTGGCACCAGGCAAACGAATA...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR GCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGATTCCTTAAGGTTAACTaGTCTGGATGCTCTCAGTTC +
Preference number: 2 (lower is better)
Translates to: KREEVRRGYRLGSKENYRFLKVN*SGCSQF
Trigger: GAACTGAGAGCATCCAGAGCAGTTAACCTTAAGGAA...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR GCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATCACTCTTCCTCTATCTaGCATGATGCCCAGGCATAC +
Preference number: 2 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHHSSSI*HDAQAY
Trigger: GTATGCCTGGGCATCATGGCAGATAGAGGAAGAGTG...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR TCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATCCAAGAAAAGGTACCTaGGAGGGGTTGACAAGTACA +
Preference number: 2 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHPRKGT*EGLTST
Trigger: TGTACTTGTCAACCCCTCTCAGGTACCTTTTCTTGG...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR CCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCATTTTTAGGTTTGTGTaGAGGGTAAAAATGCATCCA +
Preference number: 2 (lower is better)
Translates to: EKKYAEVTDLGPKKITESIFRFV*RVKMHP
Trigger: TGGATGCATTTTTACCCTCCACACAAACCTAAAAAT...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR TCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAAAGATATCCTGGGTCATaGACTGCTCAATTTACCCTT +
Preference number: 2 (lower is better)
Translates to: GGFNSINLARPKMKPGNERYPGS*TAQFTL
Trigger: AAGGGTAAATTGAGCAGTTCATGACCCAGGATATCT...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR GCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATTATTCGTTTGCCTGGTaGCAAATTTTTCTGGCCCTT +
Preference number: 2 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHYSFAW*QIFLAL
Trigger: AAGGGCCAGAAAAATTTGGCACCAGGCAAACGAATA...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR GCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAATATTCGTTTGCCTGGTaGCAAATTTTTCTGGCCCTT +
Preference number: 2 (lower is better)
Translates to: GGFNSINLARPKMKPGNEYSFAW*QIFLAL
Trigger: AAGGGCCAGAAAAATTTGGCACCAGGCAAACGAATA...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR GCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGACTATCTTTATTCGTTTaGCTGGTGCCAAATTTTTCT +
Preference number: 2 (lower is better)
Translates to: KREEVRRGYRLGSKENYRLSLFV*LVPNFS
Trigger: AGAAAAATTTGGCACCAGGCAAACGAATAAAGATAG...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR GCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATTTCCTTAAGGTTAACTaGTCTGGATGCTCTCAGTTC +
Preference number: 2 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHFLKVN*SGCSQF
Trigger: GAACTGAGAGCATCCAGAGCAGTTAACCTTAAGGAA...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR CCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAATTTTTAGGTTTGTGTaGAGGGTAAAAATGCATCCA +
Preference number: 2 (lower is better)
Translates to: KREEVRRGYRLGSKENYRIFRFV*RVKMHP
Trigger: TGGATGCATTTTTACCCTCCACACAAACCTAAAAAT...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR CCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATTTACAGTTTTCATTCTaGTCCACCTTCCCTCCTTAT +
Preference number: 2 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHLQFSF*STFPPY
Trigger: ATAAGGAGGGAAGGTGGACCAGAATGAAAACTGTAA...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR CCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATCAGAGGTTACAGACTTaGGTCCAAAGAAAATTACAG +
Preference number: 2 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHQRLQT*VQRKLQ
Trigger: CTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTG...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR CCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATATTTTTAGGTTTGTGTaGAGGGTAAAAATGCATCCA +
Preference number: 2 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHIFRFV*RVKMHP
Trigger: TGGATGCATTTTTACCCTCCACACAAACCTAAAAAT...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR CAA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCAAATTCCCCTCCTCCTaGCCTTACAGCAAAGAAGAG +
Preference number: 3 (lower is better)
Translates to: EKKYAEVTDLGPKKITESKFPSS*PYSKEE
Trigger: CTCTTCTTTGCTGTAAGGCAAGGAGGAGGGGAATTT...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR CAA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAAAATTCCCCTCCTCCTaGCCTTACAGCAAAGAAGAG +
Preference number: 3 (lower is better)
Translates to: KREEVRRGYRLGSKENYRKFPSS*PYSKEE
Trigger: CTCTTCTTTGCTGTAAGGCAAGGAGGAGGGGAATTT...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR CAA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCCCTATCTTTATTCGTTaGCCTGGTGCCAAATTTTTC +
Preference number: 3 (lower is better)
Translates to: EKKYAEVTDLGPKKITESPIFIR*PGAKFF
Trigger: GAAAAATTTGGCACCAGGCAAACGAATAAAGATAGG...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR CAA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCCTCAAATTCAGGCTATaGGTAAGGAGTCAAACAAAA +
Preference number: 3 (lower is better)
Translates to: EKKYAEVTDLGPKKITESLKFRL*VRSQTK
Trigger: TTTTGTTTGACTCCTTACCAATAGCCTGAATTTGAG...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR CAA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAATCTTTCCCCCATCCTTaGCTACCAATCATTCCCTCC +
Preference number: 3 (lower is better)
Translates to: GGFNSINLARPKMKPGNESFPHP*LPIIPS
Trigger: GGAGGGAATGATTGGTAGCAAAGGATGGGGGAAAGA...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR CAA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGACCTATCTTTATTCGTTaGCCTGGTGCCAAATTTTTC +
Preference number: 3 (lower is better)
Translates to: KREEVRRGYRLGSKENYRPIFIR*PGAKFF
Trigger: GAAAAATTTGGCACCAGGCAAACGAATAAAGATAGG...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR CAA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATAAATTCCCCTCCTCCTaGCCTTACAGCAAAGAAGAG +
Preference number: 3 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHKFPSS*PYSKEE
Trigger: CTCTTCTTTGCTGTAAGGCAAGGAGGAGGGGAATTT...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR CAA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGACTCAAATTCAGGCTATaGGTAAGGAGTCAAACAAAA +
Preference number: 3 (lower is better)
Translates to: KREEVRRGYRLGSKENYRLKFRL*VRSQTK
Trigger: TTTTGTTTGACTCCTTACCAATAGCCTGAATTTGAG...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR CAA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATGCAGAGGTTACAGACTaGGGTCCAAAGAAAATTACA +
Preference number: 3 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHAEVTD*GPKKIT
Trigger: TGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGC...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR CAA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAACCTATCTTTATTCGTTaGCCTGGTGCCAAATTTTTC +
Preference number: 3 (lower is better)
Translates to: GGFNSINLARPKMKPGNEPIFIR*PGAKFF
Trigger: GAAAAATTTGGCACCAGGCAAACGAATAAAGATAGG...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR CAA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATCTCAAATTCAGGCTATaGGTAAGGAGTCAAACAAAA +
Preference number: 3 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHLKFRL*VRSQTK
Trigger: TTTTGTTTGACTCCTTACCAATAGCCTGAATTTGAG...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
3UTR-3UTR CAA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAACTCAAATTCAGGCTATaGGTAAGGAGTCAAACAAAA +
Preference number: 3 (lower is better)
Translates to: GGFNSINLARPKMKPGNELKFRL*VRSQTK
Trigger: TTTTGTTTGACTCCTTACCAATAGCCTGAATTTGAG...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR GCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCGGGGTCCGCGCCGCGTaGCGCCGGCTGTTACCCAAC +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESGVRAA*RRLLPN
Trigger: GTTGGGTAACAGCCGGCGGCACGCGGCGCGGACCCC...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR GCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCGACCACGATGCCCTCTaGTGGGCCGCCTCCCTCCGC +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESDHDAL*WAASLR
Trigger: GCGGAGGGAGGCGGCCCAGCAGAGGGCATCGTGGTC...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR GCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCCCGGGCCAGCGAGGCTaGCTTATAACCCGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESPGQRG*LITRRG
Trigger: GCCCCGGCGGGTTATAAGGCAGCCTCGCTGGCCCGG...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000630362.4
CDS-3UTR TCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGACGCCGAGCGTGTGCGTaGCGTGGTGGCGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRRRACA*RGGAGW
Trigger: CCAGCCTGCGCCACCACGTCACGCACACGCTCGGCG...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369626.8
ENST00000458229.6
ENST00000630362.4
CDS-3UTR TCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCCCACGCGGCTGCCTGTaGCCACGATGCCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESPRGCL*PRCPLL
Trigger: CAGCAGAGGGCATCGTGGTCACAGGCAGCCGCGTGG...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR GCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGGGGTCCGCGCCGCGTaGCGCCGGCTGTTACCCAAC +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRGVRAA*RRLLPN
Trigger: GTTGGGTAACAGCCGGCGGCACGCGGCGCGGACCCC...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR GCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCGGCGGACGCGTTATATaGGCGGATCGCAGCGCCGAG +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESGGRVI*ADRSAE
Trigger: CTCGGCGCTGCGATCCGCGCATATAACGCGTCCGCC...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458229.6
CDS-3UTR GCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGACCACGATGCCCTCTaGTGGGCCGCCTCCCTCCGC +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRDHDAL*WAASLR
Trigger: GCGGAGGGAGGCGGCCCAGCAGAGGGCATCGTGGTC...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR CCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGACGTGGTGGCGCAGGCTaGAGTTCCACGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRRGGAG*SSTGPR
Trigger: CCTGGGCCCCGTGGAACTCCAGCCTGCGCCACCACG...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369626.8
ENST00000458229.6
ENST00000630362.4
CDS-3UTR TCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCGCCCGATTGGTCGCATaGGGGCTCCAGCAACACAGC +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESARLVA*GLQQHS
Trigger: GCTGTGTTGCTGGAGCCCTCATGCGACCAATCGGGC...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR TCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCGCCGCCTTAAGTCCATaGGTAGAAGGGCGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESAALSP*VEGRCG
Trigger: GCCGCAGCGCCCTTCTACTCATGGACTTAAGGCGGC...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
CDS-3UTR GCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGACAGGAGTCTGCGGGCTaGCCCGTCCCCTCCGCAAAG +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRQESAG*PVPSAK
Trigger: CTTTGCGGAGGGGACGGGGCAGCCCGCAGACTCCTG...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR CCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCGTGTGCGTGACGTGGTaGCGCAGGCTGGAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESVCVTW*RRLEFH
Trigger: GTGGAACTCCAGCCTGCGCCACCACGTCACGCACAC...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369626.8
ENST00000458229.6
ENST00000630362.4
CDS-3UTR CCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCAGCGTGTGCGTGACGTaGTGGCGCAGGCTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESSVCVT*WRRLEF
Trigger: GAACTCCAGCCTGCGCCACCACGTCACGCACACGCT...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369626.8
ENST00000458229.6
ENST00000630362.4
CDS-3UTR CCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCTGGCTTGGGCCCGATTaGTCGCATGAGGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESWLGPD*SHEGSS
Trigger: GCTGGAGCCCTCATGCGACCAATCGGGCCCAAGCCA...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCGTCACGCCTTGGCTGTaGGGAATGCGGCTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESVTPWL*GMRLSA
Trigger: TGCGGAGAGCCGCATTCCCCACAGCCAAGGCGTGAC...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR TCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAACGCCGAGCGTGTGCGTaGCGTGGTGGCGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNERRACA*RGGAGW
Trigger: CCAGCCTGCGCCACCACGTCACGCACACGCTCGGCG...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369626.8
ENST00000458229.6
ENST00000630362.4
CDS-3UTR GCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCAGAGGAACACAGGGCTaGCTGCCATGGCCAGTCCGT +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESRGTQG*LPWPVR
Trigger: ACGGACTGGCCATGGCAGGCAGCCCTGTGTTCCTCT...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR GCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGACTCCTTCACCAGCACTaGAGTCCGAGGCCACGCGGC +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRLLHQH*SPRPRG
Trigger: GCCGCGTGGCCTCGGACTGCAGTGCTGGTGAAGGAG...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR CCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGACTCCTCGGCCAGGCCTaGGACCGGCATCTTAGCACG +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRLLGQA*DRHLST
Trigger: CGTGCTAAGATGCCGGTCCCAGGCCTGGCCGAGGAG...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR CCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCGCGGCCAGGAGAGTCTaGAGGTACCACATGCAGCAG +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESAARRV*RYHMQQ
Trigger: CTGCTGCATGTGGTACCTCCAGACTCTCCTGGCCGC...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR CCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGATCGCAAGTCACCAGGTaGGGCAAGGATCGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRSQVTR*GKDRRA
Trigger: GGCCCGCCGATCCTTGCCCCACCTGGTGACTTGCGA...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR CCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGCTCACCACTTTGTCTaGCCGGGCCAGCGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRAHHFV*PGQRGC
Trigger: GCAGCCTCGCTGGCCCGGCCAGACAAAGTGGTGAGC...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630362.4
CDS-3UTR TCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGCCCGATTGGTCGCATaGGGGCTCCAGCAACACAGC +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRARLVA*GLQQHS
Trigger: GCTGTGTTGCTGGAGCCCTCATGCGACCAATCGGGC...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR TCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCCTCATCGGGAGGTCCTaGTGGGAGAACCCATGCAAC +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESLIGRS*WENPCN
Trigger: GTTGCATGGGTTCTCCCATCAGGACCTCCCGATGAG...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429288.2
CDS-3UTR TCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGCCGCCTTAAGTCCATaGGTAGAAGGGCGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRAALSP*VEGRCG
Trigger: GCCGCAGCGCCCTTCTACTCATGGACTTAAGGCGGC...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
CDS-3UTR TCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCCTGGCAGCCACAGGTTaGATGACAAAGAGCCCCCGT +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESLAATG*MTKSPR
Trigger: ACGGGGGCTCTTTGTCATTCAACCTGTGGCTGCCAG...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR GCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCCCGTCCTTCGCTCGCTaGCTCGTTTGCTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESPSFAR*LVCLFQ
Trigger: CTGGAACAAGCAAACGAGGCAGCGAGCGAAGGACGG...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369626.8
ENST00000458229.6
ENST00000630362.4
CDS-3UTR GCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATGCAGCGCCGAGCGTGTaGGTGACGTGGTGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHAAPSV*VTWWRR
Trigger: CCTGCGCCACCACGTCACGCACACGCTCGGCGCTGC...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369626.8
ENST00000458229.6
ENST00000630362.4
CDS-3UTR CCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAACGTGGTGGCGCAGGCTaGAGTTCCACGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNERGGAG*SSTGPR
Trigger: CCTGGGCCCCGTGGAACTCCAGCCTGCGCCACCACG...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369626.8
ENST00000458229.6
ENST00000630362.4
CDS-3UTR CCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAAGCGTGTGCGTGACGTaGTGGCGCAGGCTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRSVCVT*WRRLEF
Trigger: GAACTCCAGCCTGCGCCACCACGTCACGCACACGCT...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369626.8
ENST00000458229.6
ENST00000630362.4
CDS-3UTR CCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGATGGCTTGGGCCCGATTaGTCGCATGAGGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRWLGPD*SHEGSS
Trigger: GCTGGAGCCCTCATGCGACCAATCGGGCCCAAGCCA...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCCCAATCCCACAGCGCTaGAGAACCTCTGGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESPIPQR*RTSGVQ
Trigger: TTGGACCCCAGAGGTTCTCCAGCGCTGTGGGATTGG...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR TCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATCCACGCGGCTGCCTGTaGCCACGATGCCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHPRGCL*PRCPLL
Trigger: CAGCAGAGGGCATCGTGGTCACAGGCAGCCGCGTGG...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR GCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAAGAGGAACACAGGGCTaGCTGCCATGGCCAGTCCGT +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRRGTQG*LPWPVR
Trigger: ACGGACTGGCCATGGCAGGCAGCCCTGTGTTCCTCT...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR GCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCCAACTAACCGTTATATaGGCGGATCGCAGCGCCGAG +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESQLTVI*ADRSAE
Trigger: CTCGGCGCTGCGATCCGCGCATATAACGGTTAGTTG...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR GCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCAGTCTACTCGAACCCTaGAGTCACGCCTTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESSLLEP*SHALAV
Trigger: CACAGCCAAGGCGTGACTGCAGGGTTCGAGTAGACT...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR GCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATCAGGAGTCTGCGGGCTaGCCCGTCCCCTCCGCAAAG +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHQESAG*PVPSAK
Trigger: CTTTGCGGAGGGGACGGGGCAGCCCGCAGACTCCTG...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR CCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGCGGCCAGGAGAGTCTaGAGGTACCACATGCAGCAG +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRAARRV*RYHMQQ
Trigger: CTGCTGCATGTGGTACCTCCAGACTCTCCTGGCCGC...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR TCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGACTGGCAGCCACAGGTTaGATGACAAAGAGCCCCCGT +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRLAATG*MTKSPR
Trigger: ACGGGGGCTCTTTGTCATTCAACCTGTGGCTGCCAG...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR GCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGCTCGCTGCCTCGTTTaGTTGTTCCAGTACCCACGC +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRARCLV*LFQYPR
Trigger: GCGTGGGTACTGGAACAAGCAAACGAGGCAGCGAGC...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369626.8
ENST00000458229.6
ENST00000630362.4
CDS-3UTR GCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCAGACTTATCTTTCCCTaGCTTGGTTGGCTTGGGCCC +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESRLIFP*LGWLGP
Trigger: GGGCCCAAGCCAACCAAGGCAGGGAAAGATAAGTCT...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR GCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATCTCCTTCACCAGCACTaGAGTCCGAGGCCACGCGGC +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHLLHQH*SPRPRG
Trigger: GCCGCGTGGCCTCGGACTGCAGTGCTGGTGAAGGAG...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR CCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGACCAATCCCACAGCGCTaGAGAACCTCTGGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRPIPQR*RTSGVQ
Trigger: TTGGACCCCAGAGGTTCTCCAGCGCTGTGGGATTGG...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCGACAGCATTCCACAATaGTCACCAATCCCACAGCGC +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESDSIPQ*SPIPQR
Trigger: GCGCTGTGGGATTGGTGACCATTGTGGAATGCTGTC...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCGACTTTCCTCCTCCTTaGGCCCTCCATCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESDFPPP*ALHLCL
Trigger: AAGACACAGATGGAGGGCCCAAGGAGGAGGAAAGTC...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCCCCATGGATTCAGACTaGACTTTCCTCCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESPMDSD*TFLLLG
Trigger: CCCAAGGAGGAGGAAAGTCCAGTCTGAATCCATGGG...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATCTCCTCGGCCAGGCCTaGGACCGGCATCTTAGCACG +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHLLGQA*DRHLST
Trigger: CGTGCTAAGATGCCGGTCCCAGGCCTGGCCGAGGAG...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR CCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAATCGCAAGTCACCAGGTaGGGCAAGGATCGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNESQVTR*GKDRRA
Trigger: GGCCCGCCGATCCTTGCCCCACCTGGTGACTTGCGA...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR TCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATGCCCGATTGGTCGCATaGGGGCTCCAGCAACACAGC +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHARLVA*GLQQHS
Trigger: GCTGTGTTGCTGGAGCCCTCATGCGACCAATCGGGC...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR TCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAAGCCCGATTGGTCGCATaGGGGCTCCAGCAACACAGC +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNEARLVA*GLQQHS
Trigger: GCTGTGTTGCTGGAGCCCTCATGCGACCAATCGGGC...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR TCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCTTACAGAGTCCAAACTaGGGCCAAGCCTGCCAATAC +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESLQSPN*GQACQY
Trigger: GTATTGGCAGGCTTGGCCTCAGTTTGGACTCTGTAA...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR TCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATGCCGCCTTAAGTCCATaGGTAGAAGGGCGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHAALSP*VEGRCG
Trigger: GCCGCAGCGCCCTTCTACTCATGGACTTAAGGCGGC...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
CDS-3UTR GCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGACAACTAACCGTTATATaGGCGGATCGCAGCGCCGAG +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRQLTVI*ADRSAE
Trigger: CTCGGCGCTGCGATCCGCGCATATAACGGTTAGTTG...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR GCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCTCTGGAGGTACCACATaGAGCAGCCTCATGTTATCC +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESSGGTT*SSLMLS
Trigger: GGATAACATGAGGCTGCTGCATGTGGTACCTCCAGA...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR GCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATCACAGACATCCGAACTaGAGCCCGCGCCTCCACACG +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHHRHPN*SPRLHT
Trigger: CGTGTGGAGGCGCGGGCTGCAGTTCGGATGTCTGTG...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630362.4
CDS-3UTR CCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATGTGTGCGTGACGTGGTaGCGCAGGCTGGAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHVCVTW*RRLEFH
Trigger: GTGGAACTCCAGCCTGCGCCACCACGTCACGCACAC...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369626.8
ENST00000458229.6
ENST00000630362.4
CDS-3UTR CCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAAGTGTGCGTGACGTGGTaGCGCAGGCTGGAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNEVCVTW*RRLEFH
Trigger: GTGGAACTCCAGCCTGCGCCACCACGTCACGCACAC...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369626.8
ENST00000458229.6
ENST00000630362.4
CDS-3UTR CCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATAGCGTGTGCGTGACGTaGTGGCGCAGGCTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHSVCVT*WRRLEF
Trigger: GAACTCCAGCCTGCGCCACCACGTCACGCACACGCT...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369626.8
ENST00000458229.6
ENST00000630362.4
CDS-3UTR CCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAATGGCTTGGGCCCGATTaGTCGCATGAGGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNEWLGPD*SHEGSS
Trigger: GCTGGAGCCCTCATGCGACCAATCGGGCCCAAGCCA...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATTGGCTTGGGCCCGATTaGTCGCATGAGGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHWLGPD*SHEGSS
Trigger: GCTGGAGCCCTCATGCGACCAATCGGGCCCAAGCCA...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCCCATCTGTGTCTTTCTaGTCCGGAGATTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESPSVSF*SGDSAA
Trigger: AGCAGCAGAATCTCCGGACCAGAAAGACACAGATGG...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCTACCCTTCAGCCCCATaGATTCAGACTGGACTTTCC +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESYPSAP*IQTGLS
Trigger: GGAAAGTCCAGTCTGAATCCATGGGGCTGAAGGGTA...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAACAGGCCCGCGGCGGTTaGCGCCTGGTGGGTATTAAA +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNEQARGG*RLVGIK
Trigger: TTTAATACCCACCAGGCGCCAACCGCCGCGGGCCTG...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429288.2
CDS-3UTR CCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATGTCACGCCTTGGCTGTaGGGAATGCGGCTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHVTPWL*GMRLSA
Trigger: TGCGGAGAGCCGCATTCCCCACAGCCAAGGCGTGAC...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR CCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATCCTGCAGTCACGCCTTaGCTGTGGGGAATGCGGCTC +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHPAVTP*LWGMRL
Trigger: GAGCCGCATTCCCCACAGCCAAGGCGTGACTGCAGG...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR CCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAACCTGCAGTCACGCCTTaGCTGTGGGGAATGCGGCTC +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNEPAVTP*LWGMRL
Trigger: GAGCCGCATTCCCCACAGCCAAGGCGTGACTGCAGG...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR CCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCTTCTCACAGCAACCCTaGGAGGTAGGCCTTATGGTT +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESFSQQP*EVGLMV
Trigger: AACCATAAGGCCTACCTCCCAGGGTTGCTGTGAGAA...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679803.1
CDS-3UTR TCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCAAAAGCCTCTGTGGGTaGATAGGGTTAAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESKSLCG*IGLSPG
Trigger: TCCTGGACTTAACCCTATTCACCCACAGAGGCTTTT...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR TCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGACAAACAATACGGAGCTaGGCCACCCGAAGGCAAATC +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRQTIRS*ATRRQI
Trigger: GATTTGCCTTCGGGTGGCTCAGCTCCGTATTGTTTG...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR TCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCCTCCATACATGTCATTaGGCCGACCTAAAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESLHTCH*ADLKVV
Trigger: CACCACTTTTAGGTCGGCTCAATGACATGTATGGAG...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR TCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCCCAAGAAAAGGTACCTaGGAGGGGTTGACAAGTACA +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESPRKGT*EGLTST
Trigger: TGTACTTGTCAACCCCTCTCAGGTACCTTTTCTTGG...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR GCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAAAGAGGAACACAGGGCTaGCTGCCATGGCCAGTCCGT +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNERGTQG*LPWPVR
Trigger: ACGGACTGGCCATGGCAGGCAGCCCTGTGTTCCTCT...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR GCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATCTTGGCTGTGGGGAATaGGGCTCTCCGCACCACTCT +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHLGCGE*GSPHHS
Trigger: AGAGTGGTGCGGAGAGCCGCATTCCCCACAGCCAAG...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR CCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCCAGTCCGTTGGCCAATaGTCGCCTCTTGTAGAAATA +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESQSVGQ*SPLVEI
Trigger: TATTTCTACAAGAGGCGACCATTGGCCAACGGACTG...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGACAGCATTCCACAATaGTCACCAATCCCACAGCGC +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRDSIPQ*SPIPQR
Trigger: GCGCTGTGGGATTGGTGACCATTGTGGAATGCTGTC...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGACTTTCCTCCTCCTTaGGCCCTCCATCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRDFPPP*ALHLCL
Trigger: AAGACACAGATGGAGGGCCCAAGGAGGAGGAAAGTC...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGACCCATGGATTCAGACTaGACTTTCCTCCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRPMDSD*TFLLLG
Trigger: CCCAAGGAGGAGGAAAGTCCAGTCTGAATCCATGGG...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR TCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCGCCGCAAAGAAATACTaGATTCGAGGTCTTATTGGC +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESAAKKY*IRGLIG
Trigger: GCCAATAAGACCTCGAATTCAGTATTTCTTTGCGGC...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR TCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATCAGCCACAGGTTGAATaGCAAAGAGCCCCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHQPQVE*QRAPVS
Trigger: GCTGACGGGGGCTCTTTGTCATTCAACCTGTGGCTG...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR GCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAAGCTCGCTGCCTCGTTTaGTTGTTCCAGTACCCACGC +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNEARCLV*LFQYPR
Trigger: GCGTGGGTACTGGAACAAGCAAACGAGGCAGCGAGC...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369626.8
ENST00000458229.6
ENST00000630362.4
CDS-3UTR GCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAACCGTCCTTCGCTCGCTaGCTCGTTTGCTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNEPSFAR*LVCLFQ
Trigger: CTGGAACAAGCAAACGAGGCAGCGAGCGAAGGACGG...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369626.8
ENST00000458229.6
ENST00000630362.4
CDS-3UTR GCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCATGACACACTCCATTTaGAACAACGGAAGCCGCAAA +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESMTHSI*NNGSRK
Trigger: TTTGCGGCTTCCGTTGTTGCAAATGGAGTGTGTCAT...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR GCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCGTCCGGAGATTCTGCTaGTTTGGTAACTTCATTTGG +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESVRRFC*FGNFIW
Trigger: CCAAATGAAGTTACCAAAGCAGCAGAATCTCCGGAC...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR GCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCCTGGTCCGGAGATTCTaGTGCTTTGGTAACTTCATT +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESLVRRF*CFGNFI
Trigger: AATGAAGTTACCAAAGCAGCAGAATCTCCGGACCAG...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR GCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGATCTGGAGGTACCACATaGAGCAGCCTCATGTTATCC +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRSGGTT*SSLMLS
Trigger: GGATAACATGAGGCTGCTGCATGTGGTACCTCCAGA...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR GCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCATCATAAATAACTTCTaGCCCGAGTCCCTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESIINNF*PESLPL
Trigger: CAAGGGAAGGGACTCGGGGCAGAAGTTATTTATGAT...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR CCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCACACTTCGCTGGTGGTaGCATGGAATATACCTTCAA +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESTLRWW*HGIYLQ
Trigger: TTGAAGGTATATTCCATGCCACCACCAGCGAAGTGT...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCATGACACTTCGCTGGTaGTGGCATGGAATATACCTT +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESMTLRW*WHGIYL
Trigger: AAGGTATATTCCATGCCACCACCAGCGAAGTGTCAT...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCAGCAAAAAGCCTCTGTaGGTGAATAGGGTTAAGTCC +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESSKKPL*VNRVKS
Trigger: GGACTTAACCCTATTCACCCACAGAGGCTTTTTGCT...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAAGCGCTGGAGAACCTCTaGGGTCCAACAAGGTCCATC +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNEALENL*GPTRSI
Trigger: GATGGACCTTGTTGGACCCCAGAGGTTCTCCAGCGC...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATCCAATCCCACAGCGCTaGAGAACCTCTGGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHPIPQR*RTSGVQ
Trigger: TTGGACCCCAGAGGTTCTCCAGCGCTGTGGGATTGG...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAACCAATCCCACAGCGCTaGAGAACCTCTGGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNEPIPQR*RTSGVQ
Trigger: TTGGACCCCAGAGGTTCTCCAGCGCTGTGGGATTGG...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGACCATCTGTGTCTTTCTaGTCCGGAGATTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRPSVSF*SGDSAA
Trigger: AGCAGCAGAATCTCCGGACCAGAAAGACACAGATGG...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGATACCCTTCAGCCCCATaGATTCAGACTGGACTTTCC +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRYPSAP*IQTGLS
Trigger: GGAAAGTCCAGTCTGAATCCATGGGGCTGAAGGGTA...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAAGCGGGCCAAGAAGGTTaGGGCGGACAATGTCACGAA +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNEAGQEG*GGQCHE
Trigger: TTCGTGACATTGTCCGCCCCAACCTTCTTGGCCCGC...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR CCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATGCGGGCCAAGAAGGTTaGGGCGGACAATGTCACGAA +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHAGQEG*GGQCHE
Trigger: TTCGTGACATTGTCCGCCCCAACCTTCTTGGCCCGC...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR TCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGACTCCATACATGTCATTaGGCCGACCTAAAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRLHTCH*ADLKVV
Trigger: CACCACTTTTAGGTCGGCTCAATGACATGTATGGAG...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR GCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATAGTCTACTCGAACCCTaGAGTCACGCCTTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHSLLEP*SHALAV
Trigger: CACAGCCAAGGCGTGACTGCAGGGTTCGAGTAGACT...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR CCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGACAGTCCGTTGGCCAATaGTCGCCTCTTGTAGAAATA +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRQSVGQ*SPLVEI
Trigger: TATTTCTACAAGAGGCGACCATTGGCCAACGGACTG...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGATACAAGTCCCATAGATaGTCGGGCTACCATGTCAAC +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRYKSHR*SGYHVN
Trigger: GTTGACATGGTAGCCCGACCATCTATGGGACTTGTA...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR TCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCAGCCACCAACAATCATaGCTATACGACTTCCATATT +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESSHQQS*LYDFHI
Trigger: AATATGGAAGTCGTATAGTCATGATTGTTGGTGGCT...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR TCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGCCGCAAAGAAATACTaGATTCGAGGTCTTATTGGC +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRAAKKY*IRGLIG
Trigger: GCCAATAAGACCTCGAATTCAGTATTTCTTTGCGGC...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR TCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATCAAACAATACGGAGCTaGGCCACCCGAAGGCAAATC +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHQTIRS*ATRRQI
Trigger: GATTTGCCTTCGGGTGGCTCAGCTCCGTATTGTTTG...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR TCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAACAAACAATACGGAGCTaGGCCACCCGAAGGCAAATC +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNEQTIRS*ATRRQI
Trigger: GATTTGCCTTCGGGTGGCTCAGCTCCGTATTGTTTG...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR GCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATCCAAATATCGTTATATaGGCGGATCGCAGCGCCGAG +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHPNIVI*ADRSAE
Trigger: CTCGGCGCTGCGATCCGCGCATATAACGATATTTGG...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369626.8
ENST00000630362.4
CDS-3UTR GCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAAAGACTTATCTTTCCCTaGCTTGGTTGGCTTGGGCCC +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNERLIFP*LGWLGP
Trigger: GGGCCCAAGCCAACCAAGGCAGGGAAAGATAAGTCT...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR GCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATAGACTTATCTTTCCCTaGCTTGGTTGGCTTGGGCCC +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHRLIFP*LGWLGP
Trigger: GGGCCCAAGCCAACCAAGGCAGGGAAAGATAAGTCT...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR GCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCAGCTTTCTCAAGGGATaGTTTAGACTTATCTTTCCC +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESSFLKG*FRLIFP
Trigger: GGGAAAGATAAGTCTAAAGCATCCCTTGAGAAAGCT...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR GCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAATGACACACTCCATTTaGAACAACGGAAGCCGCAAA +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRMTHSI*NNGSRK
Trigger: TTTGCGGCTTCCGTTGTTGCAAATGGAGTGTGTCAT...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR GCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGACTGGTCCGGAGATTCTaGTGCTTTGGTAACTTCATT +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRLVRRF*CFGNFI
Trigger: AATGAAGTTACCAAAGCAGCAGAATCTCCGGACCAG...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAACACTTCGCTGGTGGTaGCATGGAATATACCTTCAA +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRTLRWW*HGIYLQ
Trigger: TTGAAGGTATATTCCATGCCACCACCAGCGAAGTGT...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAATGACACTTCGCTGGTaGTGGCATGGAATATACCTT +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRMTLRW*WHGIYL
Trigger: AAGGTATATTCCATGCCACCACCAGCGAAGTGTCAT...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAAGCAAAAAGCCTCTGTaGGTGAATAGGGTTAAGTCC +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRSKKPL*VNRVKS
Trigger: GGACTTAACCCTATTCACCCACAGAGGCTTTTTGCT...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATGACAGCATTCCACAATaGTCACCAATCCCACAGCGC +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHDSIPQ*SPIPQR
Trigger: GCGCTGTGGGATTGGTGACCATTGTGGAATGCTGTC...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAAGACAGCATTCCACAATaGTCACCAATCCCACAGCGC +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNEDSIPQ*SPIPQR
Trigger: GCGCTGTGGGATTGGTGACCATTGTGGAATGCTGTC...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAAGACTTTCCTCCTCCTTaGGCCCTCCATCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNEDFPPP*ALHLCL
Trigger: AAGACACAGATGGAGGGCCCAAGGAGGAGGAAAGTC...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATGACTTTCCTCCTCCTTaGGCCCTCCATCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHDFPPP*ALHLCL
Trigger: AAGACACAGATGGAGGGCCCAAGGAGGAGGAAAGTC...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATCCCATGGATTCAGACTaGACTTTCCTCCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHPMDSD*TFLLLG
Trigger: CCCAAGGAGGAGGAAAGTCCAGTCTGAATCCATGGG...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAACCCATGGATTCAGACTaGACTTTCCTCCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNEPMDSD*TFLLLG
Trigger: CCCAAGGAGGAGGAAAGTCCAGTCTGAATCCATGGG...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCCAGAGGTTACAGACTTaGGTCCAAAGAAAATTACAG +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESQRLQT*VQRKLQ
Trigger: CTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTG...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR TCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCGTTAAGTCCAGGAACTaGTTAATTGTTTGGAAGACT +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESVKSRN*LIVWKT
Trigger: AGTCTTCCAAACAATTAATCAGTTCCTGGACTTAAC...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR TCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAATTCCTCTATCTGCCATaGTGCCCAGGCATACAAAGG +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNEFLYLP*CPGIQR
Trigger: CCTTTGTATGCCTGGGCATCATGGCAGATAGAGGAA...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR TCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAATTACAGAGTCCAAACTaGGGCCAAGCCTGCCAATAC +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNELQSPN*GQACQY
Trigger: GTATTGGCAGGCTTGGCCTCAGTTTGGACTCTGTAA...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR TCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCATTCCTTTGTTTCTCTaGACTTCATTCTGGATGGTT +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESIPLFL*TSFWMV
Trigger: AACCATCCAGAATGAAGTTCAGAGAAACAAAGGAAT...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443580.6
CDS-3UTR GCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCATACAGACGTATAGTTaGTGTACGGTGTTACAGAAA +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESIQTYS*CTVLQK
Trigger: TTTCTGTAACACCGTACAGCAACTATACGTCTGTAT...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR GCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAACACTCTTCCTCTATCTaGCATGATGCCCAGGCATAC +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNEHSSSI*HDAQAY
Trigger: GTATGCCTGGGCATCATGGCAGATAGAGGAAGAGTG...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCTTTGGTAACTTCATTTaGCTTCCCAGCAACATCTAT +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESFGNFI*LPSNIY
Trigger: ATAGATGTTGCTGGGAAGCCAAATGAAGTTACCAAA...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAACCATCTGTGTCTTTCTaGTCCGGAGATTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNEPSVSF*SGDSAA
Trigger: AGCAGCAGAATCTCCGGACCAGAAAGACACAGATGG...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATCCATCTGTGTCTTTCTaGTCCGGAGATTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHPSVSF*SGDSAA
Trigger: AGCAGCAGAATCTCCGGACCAGAAAGACACAGATGG...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATTACCCTTCAGCCCCATaGATTCAGACTGGACTTTCC +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHYPSAP*IQTGLS
Trigger: GGAAAGTCCAGTCTGAATCCATGGGGCTGAAGGGTA...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAATACCCTTCAGCCCCATaGATTCAGACTGGACTTTCC +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNEYPSAP*IQTGLS
Trigger: GGAAAGTCCAGTCTGAATCCATGGGGCTGAAGGGTA...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR TCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATAAAAGCCTCTGTGGGTaGATAGGGTTAAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHKSLCG*IGLSPG
Trigger: TCCTGGACTTAACCCTATTCACCCACAGAGGCTTTT...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR TCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAAAAAAGCCTCTGTGGGTaGATAGGGTTAAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNEKSLCG*IGLSPG
Trigger: TCCTGGACTTAACCCTATTCACCCACAGAGGCTTTT...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR TCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAACTCCATACATGTCATTaGGCCGACCTAAAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNELHTCH*ADLKVV
Trigger: CACCACTTTTAGGTCGGCTCAATGACATGTATGGAG...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR TCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATCTCCATACATGTCATTaGGCCGACCTAAAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHLHTCH*ADLKVV
Trigger: CACCACTTTTAGGTCGGCTCAATGACATGTATGGAG...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR TCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAACCAAGAAAAGGTACCTaGGAGGGGTTGACAAGTACA +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNEPRKGT*EGLTST
Trigger: TGTACTTGTCAACCCCTCTCAGGTACCTTTTCTTGG...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR GCA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCCTATCTTTATTCGTTTaGCTGGTGCCAAATTTTTCT +
Preference number: 4 (lower is better)
Translates to: EKKYAEVTDLGPKKITESLSLFV*LVPNFS
Trigger: AGAAAAATTTGGCACCAGGCAAACGAATAAAGATAG...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATCAGTCCGTTGGCCAATaGTCGCCTCTTGTAGAAATA +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHQSVGQ*SPLVEI
Trigger: TATTTCTACAAGAGGCGACCATTGGCCAACGGACTG...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAACAGTCCGTTGGCCAATaGTCGCCTCTTGTAGAAATA +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNEQSVGQ*SPLVEI
Trigger: TATTTCTACAAGAGGCGACCATTGGCCAACGGACTG...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATTACAAGTCCCATAGATaGTCGGGCTACCATGTCAAC +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHYKSHR*SGYHVN
Trigger: GTTGACATGGTAGCCCGACCATCTATGGGACTTGTA...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAATACAAGTCCCATAGATaGTCGGGCTACCATGTCAAC +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNEYKSHR*SGYHVN
Trigger: GTTGACATGGTAGCCCGACCATCTATGGGACTTGTA...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGATTACAGTTTTCATTCTaGTCCACCTTCCCTCCTTAT +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRLQFSF*STFPPY
Trigger: ATAAGGAGGGAAGGTGGACCAGAATGAAAACTGTAA...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGACAGAGGTTACAGACTTaGGTCCAAAGAAAATTACAG +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRQRLQT*VQRKLQ
Trigger: CTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTG...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR TCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTTAAGTCCAGGAACTaGTTAATTGTTTGGAAGACT +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRVKSRN*LIVWKT
Trigger: AGTCTTCCAAACAATTAATCAGTTCCTGGACTTAAC...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR TCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATGCCGCAAAGAAATACTaGATTCGAGGTCTTATTGGC +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHAAKKY*IRGLIG
Trigger: GCCAATAAGACCTCGAATTCAGTATTTCTTTGCGGC...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR TCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAAGCCGCAAAGAAATACTaGATTCGAGGTCTTATTGGC +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNEAAKKY*IRGLIG
Trigger: GCCAATAAGACCTCGAATTCAGTATTTCTTTGCGGC...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR GCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAATACAGACGTATAGTTaGTGTACGGTGTTACAGAAA +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRIQTYS*CTVLQK
Trigger: TTTCTGTAACACCGTACAGCAACTATACGTCTGTAT...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR GCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATATGACACACTCCATTTaGAACAACGGAAGCCGCAAA +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHMTHSI*NNGSRK
Trigger: TTTGCGGCTTCCGTTGTTGCAAATGGAGTGTGTCAT...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR GCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAAATGACACACTCCATTTaGAACAACGGAAGCCGCAAA +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNEMTHSI*NNGSRK
Trigger: TTTGCGGCTTCCGTTGTTGCAAATGGAGTGTGTCAT...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR GCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAAGTCCGGAGATTCTGCTaGTTTGGTAACTTCATTTGG +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNEVRRFC*FGNFIW
Trigger: CCAAATGAAGTTACCAAAGCAGCAGAATCTCCGGAC...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR GCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATGTCCGGAGATTCTGCTaGTTTGGTAACTTCATTTGG +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHVRRFC*FGNFIW
Trigger: CCAAATGAAGTTACCAAAGCAGCAGAATCTCCGGAC...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR GCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAACTGGTCCGGAGATTCTaGTGCTTTGGTAACTTCATT +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNELVRRF*CFGNFI
Trigger: AATGAAGTTACCAAAGCAGCAGAATCTCCGGACCAG...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR GCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATCTGGTCCGGAGATTCTaGTGCTTTGGTAACTTCATT +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHLVRRF*CFGNFI
Trigger: AATGAAGTTACCAAAGCAGCAGAATCTCCGGACCAG...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAAACACTTCGCTGGTGGTaGCATGGAATATACCTTCAA +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNETLRWW*HGIYLQ
Trigger: TTGAAGGTATATTCCATGCCACCACCAGCGAAGTGT...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAAATGACACTTCGCTGGTaGTGGCATGGAATATACCTT +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNEMTLRW*WHGIYL
Trigger: AAGGTATATTCCATGCCACCACCAGCGAAGTGTCAT...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATATGACACTTCGCTGGTaGTGGCATGGAATATACCTT +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHMTLRW*WHGIYL
Trigger: AAGGTATATTCCATGCCACCACCAGCGAAGTGTCAT...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAAAGCAAAAAGCCTCTGTaGGTGAATAGGGTTAAGTCC +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNESKKPL*VNRVKS
Trigger: GGACTTAACCCTATTCACCCACAGAGGCTTTTTGCT...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATAGCAAAAAGCCTCTGTaGGTGAATAGGGTTAAGTCC +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHSKKPL*VNRVKS
Trigger: GGACTTAACCCTATTCACCCACAGAGGCTTTTTGCT...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGATTTGGTAACTTCATTTaGCTTCCCAGCAACATCTAT +
Preference number: 4 (lower is better)
Translates to: KREEVRRGYRLGSKENYRFGNFI*LPSNIY
Trigger: ATAGATGTTGCTGGGAAGCCAAATGAAGTTACCAAA...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR TCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATAGATATCCTGGGTCATaGACTGCTCAATTTACCCTT +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHRYPGS*TAQFTL
Trigger: AAGGGTAAATTGAGCAGTTCATGACCCAGGATATCT...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR GCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAATTCCTTAAGGTTAACTaGTCTGGATGCTCTCAGTTC +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNEFLKVN*SGCSQF
Trigger: GAACTGAGAGCATCCAGAGCAGTTAACCTTAAGGAA...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR TCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAAAGCCACCAACAATCATaGCTATACGACTTCCATATT +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNESHQQS*LYDFHI
Trigger: AATATGGAAGTCGTATAGTCATGATTGTTGGTGGCT...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR TCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATAGCCACCAACAATCATaGCTATACGACTTCCATATT +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHSHQQS*LYDFHI
Trigger: AATATGGAAGTCGTATAGTCATGATTGTTGGTGGCT...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR GCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATAGCTTTCTCAAGGGATaGTTTAGACTTATCTTTCCC +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHSFLKG*FRLIFP
Trigger: GGGAAAGATAAGTCTAAAGCATCCCTTGAGAAAGCT...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR GCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAAAGCTTTCTCAAGGGATaGTTTAGACTTATCTTTCCC +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNESFLKG*FRLIFP
Trigger: GGGAAAGATAAGTCTAAAGCATCCCTTGAGAAAGCT...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAATTACAGTTTTCATTCTaGTCCACCTTCCCTCCTTAT +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNELQFSF*STFPPY
Trigger: ATAAGGAGGGAAGGTGGACCAGAATGAAAACTGTAA...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAACAGAGGTTACAGACTTaGGTCCAAAGAAAATTACAG +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNEQRLQT*VQRKLQ
Trigger: CTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTG...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR TCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAAGTTAAGTCCAGGAACTaGTTAATTGTTTGGAAGACT +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNEVKSRN*LIVWKT
Trigger: AGTCTTCCAAACAATTAATCAGTTCCTGGACTTAAC...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR TCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATGTTAAGTCCAGGAACTaGTTAATTGTTTGGAAGACT +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHVKSRN*LIVWKT
Trigger: AGTCTTCCAAACAATTAATCAGTTCCTGGACTTAAC...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR GCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATATACAGACGTATAGTTaGTGTACGGTGTTACAGAAA +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHIQTYS*CTVLQK
Trigger: TTTCTGTAACACCGTACAGCAACTATACGTCTGTAT...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR GCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAATATGTCTTCAAATATTaGTTCTCCCCCATTCTCTCT +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNEYVFKY*FSPILS
Trigger: AGAGAGAATGGGGGAGAAGCAATATTTGAAGACATA...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443580.6
CDS-3UTR CCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAATTTGGTAACTTCATTTaGCTTCCCAGCAACATCTAT +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNEFGNFI*LPSNIY
Trigger: ATAGATGTTGCTGGGAAGCCAAATGAAGTTACCAAA...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATTTTGGTAACTTCATTTaGCTTCCCAGCAACATCTAT +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHFGNFI*LPSNIY
Trigger: ATAGATGTTGCTGGGAAGCCAAATGAAGTTACCAAA...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR GCA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATCTATCTTTATTCGTTTaGCTGGTGCCAAATTTTTCT +
Preference number: 4 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHLSLFV*LVPNFS
Trigger: AGAAAAATTTGGCACCAGGCAAACGAATAAAGATAG...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR GCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAACTATCTTTATTCGTTTaGCTGGTGCCAAATTTTTCT +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNELSLFV*LVPNFS
Trigger: AGAAAAATTTGGCACCAGGCAAACGAATAAAGATAG...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CCA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAAATTTTTAGGTTTGTGTaGAGGGTAAAAATGCATCCA +
Preference number: 4 (lower is better)
Translates to: GGFNSINLARPKMKPGNEIFRFV*RVKMHP
Trigger: TGGATGCATTTTTACCCTCCACACAAACCTAAAAAT...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS TCA 90 bp CGGCGGACGCGTTATATGCGCGGATCGCAGCGCCGAGCGTGTGCGTaGCGTGGTGGCGCAGGCTGGAGTTCCACGGGGCCCAGGGTCCGG +
Preference number: 5 (lower is better)
Translates to: RRTRYMRGSQRRACA*RGGAGWSSTGPRVR
Trigger: CCGGACCCTGGGCCCCGTGGAACTCCAGCCTGCGCCACCACGTCACGCACACGCTCGGCGCTGCGATCCGCGCATATAACGCGTCCGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458229.6
CDS GCA 90 bp GCTGCGGCGGACGCGTTATATGCGCGGATCGCAGCGCCGAGCGTGTaGGTGACGTGGTGGCGCAGGCTGGAGTTCCACGGGGCCCAGGGT +
Preference number: 5 (lower is better)
Translates to: AAADALYARIAAPSV*VTWWRRLEFHGAQG
Trigger: ACCCTGGGCCCCGTGGAACTCCAGCCTGCGCCACCACGTCACGCACACGCTCGGCGCTGCGATCCGCGCATATAACGCGTCCGCCGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458229.6
CDS CCA 90 bp GCGTTATATGCGCGGATCGCAGCGCCGAGCGTGTGCGTGACGTGGTaGCGCAGGCTGGAGTTCCACGGGGCCCAGGGTCCGGCTCCCGTC +
Preference number: 5 (lower is better)
Translates to: ALYARIAAPSVCVTW*RRLEFHGAQGPAPV
Trigger: GACGGGAGCCGGACCCTGGGCCCCGTGGAACTCCAGCCTGCGCCACCACGTCACGCACACGCTCGGCGCTGCGATCCGCGCATATAACGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458229.6
CDS CCA 90 bp GACGCGTTATATGCGCGGATCGCAGCGCCGAGCGTGTGCGTGACGTaGTGGCGCAGGCTGGAGTTCCACGGGGCCCAGGGTCCGGCTCCC +
Preference number: 5 (lower is better)
Translates to: DALYARIAAPSVCVT*WRRLEFHGAQGPAP
Trigger: GGGAGCCGGACCCTGGGCCCCGTGGAACTCCAGCCTGCGCCACCACGTCACGCACACGCTCGGCGCTGCGATCCGCGCATATAACGCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458229.6
CDS GCA 90 bp ACTGCAGTCCGAGGCCACGCGGCTGCCTGTGACCACGATGCCCTCTaGTGGGCCGCCTCCCTCCGCCGGAGACAAAGTCTCCCAACCCCG +
Preference number: 5 (lower is better)
Translates to: TAVRGHAAACDHDAL*WAASLRRRQSLPTP
Trigger: CGGGGTTGGGAGACTTTGTCTCCGGCGGAGGGAGGCGGCCCAGCAGAGGGCATCGTGGTCACAGGCAGCCGCGTGGCCTCGGACTGCAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538576.5
ENST00000628110.2
ENST00000629920.2
ENST00000679846.1
CDS GCA 90 bp AGTCACGTCGCAGCTCACCACTTTGTCTGGCCGGGCCAGCGAGGCTaGCTTATAACCCGCCGGGGCCGGAGCATGCGCGCAGGGGGCGGA +
Preference number: 5 (lower is better)
Translates to: SHVAAHHFVWPGQRG*LITRRGRSMRAGGG
Trigger: TCCGCCCCCTGCGCGCATGCTCCGGCCCCGGCGGGTTATAAGGCAGCCTCGCTGGCCCGGCCAGACAAAGTGGTGAGCTGCGACGTGACT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630362.4
CDS CCA 90 bp TCGTTATATGCGCGGATCGCAGCGCCGAGCGTGTGCGTGACGTGGTaGCGCAGGCTGGAGTTCCACGGGGCCCAGGGTCCGGCTCCCGTC +
Preference number: 5 (lower is better)
Translates to: SLYARIAAPSVCVTW*RRLEFHGAQGPAPV
Trigger: GACGGGAGCCGGACCCTGGGCCCCGTGGAACTCCAGCCTGCGCCACCACGTCACGCACACGCTCGGCGCTGCGATCCGCGCATATAACGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369626.8
ENST00000478835.1
ENST00000627457.1
ENST00000630362.4
CDS CCA 90 bp ATATCGTTATATGCGCGGATCGCAGCGCCGAGCGTGTGCGTGACGTaGTGGCGCAGGCTGGAGTTCCACGGGGCCCAGGGTCCGGCTCCC +
Preference number: 5 (lower is better)
Translates to: ISLYARIAAPSVCVT*WRRLEFHGAQGPAP
Trigger: GGGAGCCGGACCCTGGGCCCCGTGGAACTCCAGCCTGCGCCACCACGTCACGCACACGCTCGGCGCTGCGATCCGCGCATATAACGATAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369626.8
ENST00000478835.1
ENST00000627457.1
ENST00000630362.4
CDS CCA 90 bp GTACCCACGCAGCTAGCCAGTCACGTCGCAGCTCACCACTTTGTCTaGCCGGGCCAGCGAGGCTGCCTTATAACCCGCCGGGGCCGGAGC +
Preference number: 5 (lower is better)
Translates to: VPTQLASHVAAHHFV*PGQRGCLITRRGRS
Trigger: GCTCCGGCCCCGGCGGGTTATAAGGCAGCCTCGCTGGCCCGGCCAGACAAAGTGGTGAGCTGCGACGTGACTGGCTAGCTGCGTGGGTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630362.4
CDS TCA 90 bp TCCAAATATCGTTATATGCGCGGATCGCAGCGCCGAGCGTGTGCGTaGCGTGGTGGCGCAGGCTGGAGTTCCACGGGGCCCAGGGTCCGG +
Preference number: 5 (lower is better)
Translates to: SKYRYMRGSQRRACA*RGGAGWSSTGPRVR
Trigger: CCGGACCCTGGGCCCCGTGGAACTCCAGCCTGCGCCACCACGTCACGCACACGCTCGGCGCTGCGATCCGCGCATATAACGATATTTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369626.8
ENST00000478835.1
ENST00000627457.1
ENST00000630362.4
CDS GCA 90 bp ATGACAAAGAGCCCCCGTCAGCACCACTCCCAGGAGTCTGCGGGCTaGCCCGTCCCCTCCGCAAAGTCTACTCGAACCCTGCAGTCACGC +
Preference number: 5 (lower is better)
Translates to: MTKSPRQHHSQESAG*PVPSAKSTRTLQSR
Trigger: GCGTGACTGCAGGGTTCGAGTAGACTTTGCGGAGGGGACGGGGCAGCCCGCAGACTCCTGGGAGTGGTGCTGACGGGGGCTCTTTGTCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000538576.5
ENST00000628110.2
ENST00000629920.2
ENST00000679846.1
CDS CCA 90 bp CTGTGGGGAATGCGGCTCTCCGCACCACTCTCGCAAGTCACCAGGTaGGGCAAGGATCGGCGGGCCAAGAAGGTTGGGGCGGACAATGTC +
Preference number: 5 (lower is better)
Translates to: LWGMRLSAPLSQVTR*GKDRRAKKVGADNV
Trigger: GACATTGTCCGCCCCAACCTTCTTGGCCCGCCGATCCTTGCCCCACCTGGTGACTTGCGAGAGTGGTGCGGAGAGCCGCATTCCCCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000538576.5
ENST00000628110.2
ENST00000629920.2
ENST00000679846.1
CDS TCA 90 bp TCCATGAGTAGAAGGGCGCTGCGGCGGACGCTGGCAGCCACAGGTTaGATGACAAAGAGCCCCCGTCAGCACCACTCCCAGGAGTCTGCG +
Preference number: 5 (lower is better)
Translates to: SMSRRALRRTLAATG*MTKSPRQHHSQESA
Trigger: CGCAGACTCCTGGGAGTGGTGCTGACGGGGGCTCTTTGTCATTCAACCTGTGGCTGCCAGCGTCCGCCGCAGCGCCCTTCTACTCATGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000538576.5
ENST00000628110.2
ENST00000629920.2
ENST00000679846.1
CDS CCA 90 bp CCCCTCCGCAAAGTCTACTCGAACCCTGCAGTCACGCCTTGGCTGTaGGGAATGCGGCTCTCCGCACCACTCTCGCAAGTCACCAGGTGG +
Preference number: 5 (lower is better)
Translates to: PLRKVYSNPAVTPWL*GMRLSAPLSQVTRW
Trigger: CCACCTGGTGACTTGCGAGAGTGGTGCGGAGAGCCGCATTCCCCACAGCCAAGGCGTGACTGCAGGGTTCGAGTAGACTTTGCGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538576.5
ENST00000628110.2
ENST00000629920.2
ENST00000679846.1
CDS GCA 90 bp CAAATCCAAATATCGTTATATGCGCGGATCGCAGCGCCGAGCGTGTaGGTGACGTGGTGGCGCAGGCTGGAGTTCCACGGGGCCCAGGGT +
Preference number: 5 (lower is better)
Translates to: QIQISLYARIAAPSV*VTWWRRLEFHGAQG
Trigger: ACCCTGGGCCCCGTGGAACTCCAGCCTGCGCCACCACGTCACGCACACGCTCGGCGCTGCGATCCGCGCATATAACGATATTTGGATTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369626.8
ENST00000478835.1
ENST00000627457.1
ENST00000630362.4
CDS GCA 90 bp GCAAAGTCTACTCGAACCCTGCAGTCACGCCTTGGCTGTGGGGAATaGGGCTCTCCGCACCACTCTCGCAAGTCACCAGGTGGGGCAAGG +
Preference number: 5 (lower is better)
Translates to: AKSTRTLQSRLGCGE*GSPHHSRKSPGGAR
Trigger: CCTTGCCCCACCTGGTGACTTGCGAGAGTGGTGCGGAGAGCCGCATTCCCCACAGCCAAGGCGTGACTGCAGGGTTCGAGTAGACTTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000538576.5
ENST00000628110.2
ENST00000629920.2
ENST00000679846.1
CDS GCA 90 bp CCAAGAAGGTTGGGGCGGACAATGTCACGAATCATAAATAACTTCTaGCCCGAGTCCCTTCCCTTGGGGCAGAAGCGGCCAGGAGAGTCT +
Preference number: 5 (lower is better)
Translates to: PRRLGRTMSRIINNF*PESLPLGQKRPGES
Trigger: AGACTCTCCTGGCCGCTTCTGCCCCAAGGGAAGGGACTCGGGGCAGAAGTTATTTATGATTCGTGACATTGTCCGCCCCAACCTTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000538576.5
ENST00000628110.2
ENST00000629920.2
ENST00000679846.1
CDS-3UTR CAA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCCCCTGCAGTCACGCCTaGGCTGTGGGGAATGCGGCT +
Preference number: 5 (lower is better)
Translates to: EKKYAEVTDLGPKKITESPCSHA*AVGNAA
Trigger: AGCCGCATTCCCCACAGCCAAGGCGTGACTGCAGGG...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS GCA 90 bp AGATTTTCCAGCTTTCTCAAGGGATGCTTTAGACTTATCTTTCCCTaGCTTGGTTGGCTTGGGCCCGATTGGTCGCATGAGGGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: RFSSFLKGCFRLIFP*LGWLGPDWSHEGSS
Trigger: GCTGGAGCCCTCATGCGACCAATCGGGCCCAAGCCAACCAAGGCAGGGAAAGATAAGTCTAAAGCATCCCTTGAGAAAGCTGGAAAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000629508.2
ENST00000629920.2
ENST00000630362.4
ENST00000679803.1
ENST00000679846.1
CDS CCA 90 bp GGAGGACAGGACAGCATTCCACAATGGTCACCAATCCCACAGCGCTaGAGAACCTCTGGGGTCCAACAAGGTCCATCAATGTTTCAAACA +
Preference number: 5 (lower is better)
Translates to: GGQDSIPQWSPIPQR*RTSGVQQGPSMFQT
Trigger: TGTTTGAAACATTGATGGACCTTGTTGGACCCCAGAGGTTCTCCAGCGCTGTGGGATTGGTGACCATTGTGGAATGCTGTCCTGTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000629920.2
ENST00000630362.4
ENST00000679803.1
ENST00000679846.1
CDS-3UTR CAA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCCCTGCCTTGGTTGGCTaGGGCCCGATTGGTCGCATG +
Preference number: 5 (lower is better)
Translates to: EKKYAEVTDLGPKKITESPALVG*GPIGRM
Trigger: CATGCGACCAATCGGGCCCAAGCCAACCAAGGCAGG...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CAA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCGGCGGGCCAAGAAGGTaGGGGCGGACAATGTCACGA +
Preference number: 5 (lower is better)
Translates to: EKKYAEVTDLGPKKITESGGPRR*GRTMSR
Trigger: TCGTGACATTGTCCGCCCCAACCTTCTTGGCCCGCC...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR CAA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCCGCTGCCTCGTTTGCTaGTTCCAGTACCCACGCAGC +
Preference number: 5 (lower is better)
Translates to: EKKYAEVTDLGPKKITESRCLVC*FQYPRS
Trigger: GCTGCGTGGGTACTGGAACAAGCAAACGAGGCAGCG...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369626.8
ENST00000458229.6
ENST00000630362.4
CDS-3UTR CAA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGACCCTGCAGTCACGCCTaGGCTGTGGGGAATGCGGCT +
Preference number: 5 (lower is better)
Translates to: KREEVRRGYRLGSKENYRPCSHA*AVGNAA
Trigger: AGCCGCATTCCCCACAGCCAAGGCGTGACTGCAGGG...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR CAA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCGCTGGCAGCCACAGGTaGAATGACAAAGAGCCCCCG +
Preference number: 5 (lower is better)
Translates to: EKKYAEVTDLGPKKITESAGSHR*NDKEPP
Trigger: CGGGGGCTCTTTGTCATTCAACCTGTGGCTGCCAGC...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS GCA 90 bp CTCCTTGGGCCCTCCATCTGTGTCTTTCTGGTCCGGAGATTCTGCTaGTTTGGTAACTTCATTTGGCTTCCCAGCAACATCTATACTGGT +
Preference number: 5 (lower is better)
Translates to: LLGPSICVFLVRRFC*FGNFIWLPSNIYTG
Trigger: ACCAGTATAGATGTTGCTGGGAAGCCAAATGAAGTTACCAAAGCAGCAGAATCTCCGGACCAGAAAGACACAGATGGAGGGCCCAAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS GCA 90 bp CTCCTCCTTGGGCCCTCCATCTGTGTCTTTCTGGTCCGGAGATTCTaGTGCTTTGGTAACTTCATTTGGCTTCCCAGCAACATCTATACT +
Preference number: 5 (lower is better)
Translates to: LLLGPSICVFLVRRF*CFGNFIWLPSNIYT
Trigger: AGTATAGATGTTGCTGGGAAGCCAAATGAAGTTACCAAAGCAGCAGAATCTCCGGACCAGAAAGACACAGATGGAGGGCCCAAGGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CAA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGACCTGCCTTGGTTGGCTaGGGCCCGATTGGTCGCATG +
Preference number: 5 (lower is better)
Translates to: KREEVRRGYRLGSKENYRPALVG*GPIGRM
Trigger: CATGCGACCAATCGGGCCCAAGCCAACCAAGGCAGG...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CAA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGGCGGGCCAAGAAGGTaGGGGCGGACAATGTCACGA +
Preference number: 5 (lower is better)
Translates to: KREEVRRGYRLGSKENYRGGPRR*GRTMSR
Trigger: TCGTGACATTGTCCGCCCCAACCTTCTTGGCCCGCC...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR CAA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGACGCTCGCTGCCTCGTTaGCTTGTTCCAGTACCCACG +
Preference number: 5 (lower is better)
Translates to: KREEVRRGYRLGSKENYRRSLPR*LVPVPT
Trigger: CGTGGGTACTGGAACAAGCAAACGAGGCAGCGAGCG...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369626.8
ENST00000458229.6
ENST00000630362.4
CDS-3UTR CAA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATCCCGAGTCCCTTCCCTaGGGGCAGAAGCGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHPESLP*GQKRPG
Trigger: TCCTGGCCGCTTCTGCCCCAAGGGAAGGGACTCGGG...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538576.5
ENST00000628110.2
CDS-3UTR CAA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAATCGCAGCTCACCACTTaGTCTGGCCGGGCCAGCGAG +
Preference number: 5 (lower is better)
Translates to: GGFNSINLARPKMKPGNESQLTT*SGRASE
Trigger: CTCGCTGGCCCGGCCAGACAAAGTGGTGAGCTGCGA...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630362.4
CDS-3UTR CAA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATCCTGCCTTGGTTGGCTaGGGCCCGATTGGTCGCATG +
Preference number: 5 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHPALVG*GPIGRM
Trigger: CATGCGACCAATCGGGCCCAAGCCAACCAAGGCAGG...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CAA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAACCTGCCTTGGTTGGCTaGGGCCCGATTGGTCGCATG +
Preference number: 5 (lower is better)
Translates to: GGFNSINLARPKMKPGNEPALVG*GPIGRM
Trigger: CATGCGACCAATCGGGCCCAAGCCAACCAAGGCAGG...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CAA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAACGCTGCCTCGTTTGCTaGTTCCAGTACCCACGCAGC +
Preference number: 5 (lower is better)
Translates to: GGFNSINLARPKMKPGNERCLVC*FQYPRS
Trigger: GCTGCGTGGGTACTGGAACAAGCAAACGAGGCAGCG...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369626.8
ENST00000458229.6
ENST00000630362.4
CDS-3UTR CAA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATCGCTGCCTCGTTTGCTaGTTCCAGTACCCACGCAGC +
Preference number: 5 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHRCLVC*FQYPRS
Trigger: GCTGCGTGGGTACTGGAACAAGCAAACGAGGCAGCG...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369626.8
ENST00000458229.6
ENST00000630362.4
CDS-3UTR CAA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAACGCTCGCTGCCTCGTTaGCTTGTTCCAGTACCCACG +
Preference number: 5 (lower is better)
Translates to: GGFNSINLARPKMKPGNERSLPR*LVPVPT
Trigger: CGTGGGTACTGGAACAAGCAAACGAGGCAGCGAGCG...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369626.8
ENST00000458229.6
ENST00000630362.4
CDS-3UTR CAA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCGAGGTCTTATTGGCTTaGTGTTGGCTACAAGTCCCA +
Preference number: 5 (lower is better)
Translates to: EKKYAEVTDLGPKKITESEVLLA*CWLQVP
Trigger: TGGGACTTGTAGCCAACACAAAGCCAATAAGACCTC...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CAA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCTATGACACACTCCATTaGCAACAACGGAAGCCGCAA +
Preference number: 5 (lower is better)
Translates to: EKKYAEVTDLGPKKITESYDTLH*QQRKPQ
Trigger: TTGCGGCTTCCGTTGTTGCAAATGGAGTGTGTCATA...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS CCA 90 bp TGTGTCTTTCTGGTCCGGAGATTCTGCTGCTTTGGTAACTTCATTTaGCTTCCCAGCAACATCTATACTGGTCTCTTCCTCTTTACTTTC +
Preference number: 5 (lower is better)
Translates to: CVFLVRRFCCFGNFI*LPSNIYTGLFLFTF
Trigger: GAAAGTAAAGAGGAAGAGACCAGTATAGATGTTGCTGGGAAGCCAAATGAAGTTACCAAAGCAGCAGAATCTCCGGACCAGAAAGACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CAA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCTCTCCATACATGTCATaGAGCCGACCTAAAAGTGGT +
Preference number: 5 (lower is better)
Translates to: EKKYAEVTDLGPKKITESSPYMS*SRPKSG
Trigger: ACCACTTTTAGGTCGGCTCAATGACATGTATGGAGA...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CAA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCGGAGATTCTGCTGCTTaGGTAACTTCATTTGGCTTC +
Preference number: 5 (lower is better)
Translates to: EKKYAEVTDLGPKKITESGDSAA*VTSFGF
Trigger: GAAGCCAAATGAAGTTACCAAAGCAGCAGAATCTCC...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CAA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGATCTTTCCCCCATCCTTaGCTACCAATCATTCCCTCC +
Preference number: 5 (lower is better)
Translates to: KREEVRRGYRLGSKENYRSFPHP*LPIIPS
Trigger: GGAGGGAATGATTGGTAGCAAAGGATGGGGGAAAGA...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CAA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGAGGTCTTATTGGCTTaGTGTTGGCTACAAGTCCCA +
Preference number: 5 (lower is better)
Translates to: KREEVRRGYRLGSKENYREVLLA*CWLQVP
Trigger: TGGGACTTGTAGCCAACACAAAGCCAATAAGACCTC...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CAA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGATATGACACACTCCATTaGCAACAACGGAAGCCGCAA +
Preference number: 5 (lower is better)
Translates to: KREEVRRGYRLGSKENYRYDTLH*QQRKPQ
Trigger: TTGCGGCTTCCGTTGTTGCAAATGGAGTGTGTCATA...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CAA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCCCTTTTTCTGCTCGTTaGCTTTCTGTTCTTTTGCCA +
Preference number: 5 (lower is better)
Translates to: EKKYAEVTDLGPKKITESPFSAR*LSVLLP
Trigger: TGGCAAAAGAACAGAAAGCAAACGAGCAGAAAAAGG...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CAA 90 bp GAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGTCCGCAGAGGTTACAGACTaGGGTCCAAAGAAAATTACA +
Preference number: 5 (lower is better)
Translates to: EKKYAEVTDLGPKKITESAEVTD*GPKKIT
Trigger: TGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGC...GGACTCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CAA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGATCTCCATACATGTCATaGAGCCGACCTAAAAGTGGT +
Preference number: 5 (lower is better)
Translates to: KREEVRRGYRLGSKENYRSPYMS*SRPKSG
Trigger: ACCACTTTTAGGTCGGCTCAATGACATGTATGGAGA...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CAA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGGAGATTCTGCTGCTTaGGTAACTTCATTTGGCTTC +
Preference number: 5 (lower is better)
Translates to: KREEVRRGYRLGSKENYRGDSAA*VTSFGF
Trigger: GAAGCCAAATGAAGTTACCAAAGCAGCAGAATCTCC...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CAA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGACCTTTTTCTGCTCGTTaGCTTTCTGTTCTTTTGCCA +
Preference number: 5 (lower is better)
Translates to: KREEVRRGYRLGSKENYRPFSAR*LSVLLP
Trigger: TGGCAAAAGAACAGAAAGCAAACGAGCAGAAAAAGG...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CAA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATTCTTTCCCCCATCCTTaGCTACCAATCATTCCCTCC +
Preference number: 5 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHSFPHP*LPIIPS
Trigger: GGAGGGAATGATTGGTAGCAAAGGATGGGGGAAAGA...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CAA 90 bp AAGAGAGAAGAAGTACGCAGAGGTTACAGACTTGGGTCCAAAGAAAATTACAGAGCAGAGGTTACAGACTaGGGTCCAAAGAAAATTACA +
Preference number: 5 (lower is better)
Translates to: KREEVRRGYRLGSKENYRAEVTD*GPKKIT
Trigger: TGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGC...TCTGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGCGTACTTCTTCTCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CAA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAAGAGGTCTTATTGGCTTaGTGTTGGCTACAAGTCCCA +
Preference number: 5 (lower is better)
Translates to: GGFNSINLARPKMKPGNEEVLLA*CWLQVP
Trigger: TGGGACTTGTAGCCAACACAAAGCCAATAAGACCTC...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CAA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATGAGGTCTTATTGGCTTaGTGTTGGCTACAAGTCCCA +
Preference number: 5 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHEVLLA*CWLQVP
Trigger: TGGGACTTGTAGCCAACACAAAGCCAATAAGACCTC...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CAA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATTATGACACACTCCATTaGCAACAACGGAAGCCGCAA +
Preference number: 5 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHYDTLH*QQRKPQ
Trigger: TTGCGGCTTCCGTTGTTGCAAATGGAGTGTGTCATA...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CAA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAATATGACACACTCCATTaGCAACAACGGAAGCCGCAA +
Preference number: 5 (lower is better)
Translates to: GGFNSINLARPKMKPGNEYDTLH*QQRKPQ
Trigger: TTGCGGCTTCCGTTGTTGCAAATGGAGTGTGTCATA...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CAA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAAAAATTCCCCTCCTCCTaGCCTTACAGCAAAGAAGAG +
Preference number: 5 (lower is better)
Translates to: GGFNSINLARPKMKPGNEKFPSS*PYSKEE
Trigger: CTCTTCTTTGCTGTAAGGCAAGGAGGAGGGGAATTT...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CAA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATTCTCCATACATGTCATaGAGCCGACCTAAAAGTGGT +
Preference number: 5 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHSPYMS*SRPKSG
Trigger: ACCACTTTTAGGTCGGCTCAATGACATGTATGGAGA...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CAA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAAGGAGATTCTGCTGCTTaGGTAACTTCATTTGGCTTC +
Preference number: 5 (lower is better)
Translates to: GGFNSINLARPKMKPGNEGDSAA*VTSFGF
Trigger: GAAGCCAAATGAAGTTACCAAAGCAGCAGAATCTCC...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CAA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATGGAGATTCTGCTGCTTaGGTAACTTCATTTGGCTTC +
Preference number: 5 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHGDSAA*VTSFGF
Trigger: GAAGCCAAATGAAGTTACCAAAGCAGCAGAATCTCC...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CAA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAACCTTTTTCTGCTCGTTaGCTTTCTGTTCTTTTGCCA +
Preference number: 5 (lower is better)
Translates to: GGFNSINLARPKMKPGNEPFSAR*LSVLLP
Trigger: TGGCAAAAGAACAGAAAGCAAACGAGCAGAAAAAGG...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CAA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAAGCAGAGGTTACAGACTaGGGTCCAAAGAAAATTACA +
Preference number: 5 (lower is better)
Translates to: GGFNSINLARPKMKPGNEAEVTD*GPKKIT
Trigger: TGTAATTTTCTTTGGACCCAAGTCTGTAACCTCTGC...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CAA 90 bp TTTCAGATTTCCTTTACTTACATTCCTTATTCCCTCACCAACAGTAATCCTCATCCTATCTTTATTCGTTaGCCTGGTGCCAAATTTTTC +
Preference number: 5 (lower is better)
Translates to: FQISFTYIPYSLTNSNPHPIFIR*PGAKFF
Trigger: GAAAAATTTGGCACCAGGCAAACGAATAAAGATAGG...ATGAGGATTACTGTTGGTGAGGGAATAAGGAATGTAAGTAAAGGAAATCTGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS-3UTR CAA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAATTATGTCTTCAAATATaGCTTCTCCCCCATTCTCTC +
Preference number: 5 (lower is better)
Translates to: GGFNSINLARPKMKPGNELCLQI*LLPHSL
Trigger: GAGAGAATGGGGGAGAAGCAATATTTGAAGACATAA...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443580.6
CDS GCA 90 bp AATAGCTCACTAATGTTTGCTTTCTGTCAGCATTCCCATCTTACATaGTTGTTTTGTAATAGACCCACATTAGTAGGGAGATATACTATA +
Preference number: 5 (lower is better)
Translates to: NSSLMFAFCQHSHLT*LFCNRPTLVGRYTI
Trigger: TATAGTATATCTCCCTACTAATGTGGGTCTATTACAAAACAAGCATGTAAGATGGGAATGCTGACAGAAAGCAAACATTAGTGAGCTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679846.1
CDS-3UTR CAA 90 bp GGAGGATTTAATTCAATCAATTTAGCAAGGCCCAAAATGAAACCTGGTAATGAAACTCTCCCTTCTATGTaGTCATGTTATCATTCATTC +
Preference number: 5 (lower is better)
Translates to: GGFNSINLARPKMKPGNETLPSM*SCYHSF
Trigger: GAATGAATGATAACATGACAACATAGAAGGGAGAGT...TTCATTACCAGGTTTCATTTTGGGCCTTGCTAAATTGATTGAATTAAATCCTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443580.6
CDS CCA 72 bp GCGCGGATCGCAGCGCCGAGCGTGTGCGTGACGTGGTaGCGCAGGCTGGAGTTCCACGGGGCCCAGGGTCCG +
Preference number: 6 (lower is better)
Translates to: ARIAAPSVCVTW*RRLEFHGAQGP
Trigger: CGGACCCTGGGCCCCGTGGAACTCCAGCCTGCGCCACCACGTCACGCACACGCTCGGCGCTGCGATCCGCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369626.8
ENST00000458229.6
ENST00000478835.1
ENST00000627457.1
ENST00000630362.4
CDS GCA 72 bp CGAGGCCACGCGGCTGCCTGTGACCACGATGCCCTCTaGTGGGCCGCCTCCCTCCGCCGGAGACAAAGTCTC +
Preference number: 6 (lower is better)
Translates to: RGHAAACDHDAL*WAASLRRRQSL
Trigger: GAGACTTTGTCTCCGGCGGAGGGAGGCGGCCCAGCAGAGGGCATCGTGGTCACAGGCAGCCGCGTGGCCTCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538576.5
ENST00000628110.2
ENST00000629920.2
ENST00000679846.1
CDS TCA 72 bp CGTTATATGCGCGGATCGCAGCGCCGAGCGTGTGCGTaGCGTGGTGGCGCAGGCTGGAGTTCCACGGGGCCC +
Preference number: 6 (lower is better)
Translates to: RYMRGSQRRACA*RGGAGWSSTGP
Trigger: GGGCCCCGTGGAACTCCAGCCTGCGCCACCACGTCACGCACACGCTCGGCGCTGCGATCCGCGCATATAACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369626.8
ENST00000458229.6
ENST00000478835.1
ENST00000627457.1
ENST00000630362.4
CDS GCA 72 bp GCAGCTCACCACTTTGTCTGGCCGGGCCAGCGAGGCTaGCTTATAACCCGCCGGGGCCGGAGCATGCGCGCA +
Preference number: 6 (lower is better)
Translates to: AAHHFVWPGQRG*LITRRGRSMRA
Trigger: TGCGCGCATGCTCCGGCCCCGGCGGGTTATAAGGCAGCCTCGCTGGCCCGGCCAGACAAAGTGGTGAGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630362.4
CDS GCA 72 bp GACGCGTTATATGCGCGGATCGCAGCGCCGAGCGTGTaGGTGACGTGGTGGCGCAGGCTGGAGTTCCACGGG +
Preference number: 6 (lower is better)
Translates to: DALYARIAAPSV*VTWWRRLEFHG
Trigger: CCCGTGGAACTCCAGCCTGCGCCACCACGTCACGCACACGCTCGGCGCTGCGATCCGCGCATATAACGCGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458229.6
CDS GCA 72 bp AGCCCCCGTCAGCACCACTCCCAGGAGTCTGCGGGCTaGCCCGTCCCCTCCGCAAAGTCTACTCGAACCCTG +
Preference number: 6 (lower is better)
Translates to: SPRQHHSQESAG*PVPSAKSTRTL
Trigger: CAGGGTTCGAGTAGACTTTGCGGAGGGGACGGGGCAGCCCGCAGACTCCTGGGAGTGGTGCTGACGGGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000538576.5
ENST00000628110.2
ENST00000629920.2
ENST00000679846.1
CDS CAA 90 bp CACGGGGCCCAGGGTCCGGCTCCCGTCCTTCGCTCGCTGCCTCGTTaGCTTGTTCCAGTACCCACGCAGCTAGCCAGTCACGTCGCAGCT +
Preference number: 6 (lower is better)
Translates to: HGAQGPAPVLRSLPR*LVPVPTQLASHVAA
Trigger: AGCTGCGACGTGACTGGCTAGCTGCGTGGGTACTGGAACAAGCAAACGAGGCAGCGAGCGAAGGACGGGAGCCGGACCCTGGGCCCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369626.8
ENST00000458229.6
ENST00000630362.4
CDS TCA 72 bp GGGCGCTGCGGCGGACGCTGGCAGCCACAGGTTGAATaGCAAAGAGCCCCCGTCAGCACCACTCCCAGGAGT +
Preference number: 6 (lower is better)
Translates to: GRCGGRWQPQVE*QRAPVSTTPRS
Trigger: ACTCCTGGGAGTGGTGCTGACGGGGGCTCTTTGTCATTCAACCTGTGGCTGCCAGCGTCCGCCGCAGCGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000538576.5
ENST00000628110.2
ENST00000629920.2
ENST00000679846.1
CDS CCA 72 bp ATGCGGCTCTCCGCACCACTCTCGCAAGTCACCAGGTaGGGCAAGGATCGGCGGGCCAAGAAGGTTGGGGCG +
Preference number: 6 (lower is better)
Translates to: MRLSAPLSQVTR*GKDRRAKKVGA
Trigger: CGCCCCAACCTTCTTGGCCCGCCGATCCTTGCCCCACCTGGTGACTTGCGAGAGTGGTGCGGAGAGCCGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538576.5
ENST00000628110.2
ENST00000629920.2
ENST00000679846.1
CDS TCA 72 bp AGAAGGGCGCTGCGGCGGACGCTGGCAGCCACAGGTTaGATGACAAAGAGCCCCCGTCAGCACCACTCCCAG +
Preference number: 6 (lower is better)
Translates to: RRALRRTLAATG*MTKSPRQHHSQ
Trigger: CTGGGAGTGGTGCTGACGGGGGCTCTTTGTCATTCAACCTGTGGCTGCCAGCGTCCGCCGCAGCGCCCTTCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000538576.5
ENST00000628110.2
ENST00000629920.2
ENST00000679846.1
CDS CCA 72 bp CAGCTAGCCAGTCACGTCGCAGCTCACCACTTTGTCTaGCCGGGCCAGCGAGGCTGCCTTATAACCCGCCGG +
Preference number: 6 (lower is better)
Translates to: QLASHVAAHHFV*PGQRGCLITRR
Trigger: CCGGCGGGTTATAAGGCAGCCTCGCTGGCCCGGCCAGACAAAGTGGTGAGCTGCGACGTGACTGGCTAGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630362.4
CDS GCA 72 bp ATATCGTTATATGCGCGGATCGCAGCGCCGAGCGTGTaGGTGACGTGGTGGCGCAGGCTGGAGTTCCACGGG +
Preference number: 6 (lower is better)
Translates to: ISLYARIAAPSV*VTWWRRLEFHG
Trigger: CCCGTGGAACTCCAGCCTGCGCCACCACGTCACGCACACGCTCGGCGCTGCGATCCGCGCATATAACGATAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369626.8
ENST00000478835.1
ENST00000627457.1
ENST00000630362.4
CDS CAA 72 bp CAGGGTCCGGCTCCCGTCCTTCGCTCGCTGCCTCGTTaGCTTGTTCCAGTACCCACGCAGCTAGCCAGTCAC +
Preference number: 6 (lower is better)
Translates to: QGPAPVLRSLPR*LVPVPTQLASH
Trigger: GTGACTGGCTAGCTGCGTGGGTACTGGAACAAGCAAACGAGGCAGCGAGCGAAGGACGGGAGCCGGACCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369626.8
ENST00000458229.6
ENST00000478835.1
ENST00000627457.1
ENST00000630362.4
CDS GCA 72 bp ACTCGAACCCTGCAGTCACGCCTTGGCTGTGGGGAATaGGGCTCTCCGCACCACTCTCGCAAGTCACCAGGT +
Preference number: 6 (lower is better)
Translates to: TRTLQSRLGCGE*GSPHHSRKSPG
Trigger: ACCTGGTGACTTGCGAGAGTGGTGCGGAGAGCCGCATTCCCCACAGCCAAGGCGTGACTGCAGGGTTCGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538576.5
ENST00000628110.2
ENST00000629920.2
ENST00000679846.1
CDS CCA 72 bp CTCCGCAAAGTCTACTCGAACCCTGCAGTCACGCCTTaGCTGTGGGGAATGCGGCTCTCCGCACCACTCTCG +
Preference number: 6 (lower is better)
Translates to: LRKVYSNPAVTP*LWGMRLSAPLS
Trigger: CGAGAGTGGTGCGGAGAGCCGCATTCCCCACAGCCAAGGCGTGACTGCAGGGTTCGAGTAGACTTTGCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538576.5
ENST00000628110.2
ENST00000629920.2
ENST00000679846.1
CDS CAA 72 bp CCTCCGCAAAGTCTACTCGAACCCTGCAGTCACGCCTaGGCTGTGGGGAATGCGGCTCTCCGCACCACTCTC +
Preference number: 6 (lower is better)
Translates to: PPQSLLEPCSHA*AVGNAALRTTL
Trigger: GAGAGTGGTGCGGAGAGCCGCATTCCCCACAGCCAAGGCGTGACTGCAGGGTTCGAGTAGACTTTGCGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538576.5
ENST00000628110.2
ENST00000629920.2
ENST00000679846.1
CDS TCA 72 bp CTCCAGATTTCTCTCAACAGGGCCGCCTTAAGTCCATaGGTAGAAGGGCGCTGCGGCGGACGCTGGCAGCCA +
Preference number: 6 (lower is better)
Translates to: LQISLNRAALSP*VEGRCGGRWQP
Trigger: TGGCTGCCAGCGTCCGCCGCAGCGCCCTTCTACTCATGGACTTAAGGCGGCCCTGTTGAGAGAAATCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538576.5
ENST00000628110.2
ENST00000629920.2
ENST00000679846.1
CDS CCA 72 bp GTCCCTTCCCTTGGGGCAGAAGCGGCCAGGAGAGTCTaGAGGTACCACATGCAGCAGCCTCATGTTATCCCT +
Preference number: 6 (lower is better)
Translates to: VPSLGAEAARRV*RYHMQQPHVIP
Trigger: AGGGATAACATGAGGCTGCTGCATGTGGTACCTCCAGACTCTCCTGGCCGCTTCTGCCCCAAGGGAAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538576.5
ENST00000628110.2
ENST00000629920.2
ENST00000679846.1
CDS CCA 72 bp AAAGTCTACTCGAACCCTGCAGTCACGCCTTGGCTGTaGGGAATGCGGCTCTCCGCACCACTCTCGCAAGTC +
Preference number: 6 (lower is better)
Translates to: KVYSNPAVTPWL*GMRLSAPLSQV
Trigger: GACTTGCGAGAGTGGTGCGGAGAGCCGCATTCCCCACAGCCAAGGCGTGACTGCAGGGTTCGAGTAGACTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538576.5
ENST00000628110.2
ENST00000629920.2
ENST00000679846.1
CDS TCA 72 bp CTCCAGATTTCTCTCAACAGGGCCGCCTTAAGTCCATaGGTAGAAGGGCGCTGCGGCGGACGCGTTATATGC +
Preference number: 6 (lower is better)
Translates to: LQISLNRAALSP*VEGRCGGRVIC
Trigger: GCATATAACGCGTCCGCCGCAGCGCCCTTCTACTCATGGACTTAAGGCGGCCCTGTTGAGAGAAATCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458229.6
CDS GCA 72 bp TTGGGGCGGACAATGTCACGAATCATAAATAACTTCTaGCCCGAGTCCCTTCCCTTGGGGCAGAAGCGGCCA +
Preference number: 6 (lower is better)
Translates to: LGRTMSRIINNF*PESLPLGQKRP
Trigger: TGGCCGCTTCTGCCCCAAGGGAAGGGACTCGGGGCAGAAGTTATTTATGATTCGTGACATTGTCCGCCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000538576.5
ENST00000628110.2
ENST00000629920.2
ENST00000679846.1
CDS CCA 72 bp CAGCCCCATGGATTCAGACTGGACTTTCCTCCTCCTTaGGCCCTCCATCTGTGTCTTTCTGGTCCGGAGATT +
Preference number: 6 (lower is better)
Translates to: QPHGFRLDFPPP*ALHLCLSGPEI
Trigger: AATCTCCGGACCAGAAAGACACAGATGGAGGGCCCAAGGAGGAGGAAAGTCCAGTCTGAATCCATGGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS CCA 72 bp GACAGCATTCCACAATGGTCACCAATCCCACAGCGCTaGAGAACCTCTGGGGTCCAACAAGGTCCATCAATG +
Preference number: 6 (lower is better)
Translates to: DSIPQWSPIPQR*RTSGVQQGPSM
Trigger: CATTGATGGACCTTGTTGGACCCCAGAGGTTCTCCAGCGCTGTGGGATTGGTGACCATTGTGGAATGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000629920.2
ENST00000630362.4
ENST00000679803.1
ENST00000679846.1
CDS CCA 72 bp CTGCTCAATTTACCCTTCAGCCCCATGGATTCAGACTaGACTTTCCTCCTCCTTGGGCCCTCCATCTGTGTC +
Preference number: 6 (lower is better)
Translates to: LLNLPFSPMDSD*TFLLLGPSICV
Trigger: GACACAGATGGAGGGCCCAAGGAGGAGGAAAGTCCAGTCTGAATCCATGGGGCTGAAGGGTAAATTGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS CAA 72 bp TCACCAGGTGGGGCAAGGATCGGCGGGCCAAGAAGGTaGGGGCGGACAATGTCACGAATCATAAATAACTTC +
Preference number: 6 (lower is better)
Translates to: SPGGARIGGPRR*GRTMSRIINNF
Trigger: GAAGTTATTTATGATTCGTGACATTGTCCGCCCCAACCTTCTTGGCCCGCCGATCCTTGCCCCACCTGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000538576.5
ENST00000628110.2
ENST00000629920.2
ENST00000679846.1
CDS CAA 90 bp ATTTACCCTTCAGCCCCATGGATTCAGACTGGACTTTCCTCCTCCTaGGGCCCTCCATCTGTGTCTTTCTGGTCCGGAGATTCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: IYPSAPWIQTGLSSS*GPPSVSFWSGDSAA
Trigger: AGCAGCAGAATCTCCGGACCAGAAAGACACAGATGGAGGGCCCAAGGAGGAGGAAAGTCCAGTCTGAATCCATGGGGCTGAAGGGTAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS GCA 72 bp GGGCCCTCCATCTGTGTCTTTCTGGTCCGGAGATTCTaGTGCTTTGGTAACTTCATTTGGCTTCCCAGCAAC +
Preference number: 6 (lower is better)
Translates to: GPSICVFLVRRF*CFGNFIWLPSN
Trigger: GTTGCTGGGAAGCCAAATGAAGTTACCAAAGCAGCAGAATCTCCGGACCAGAAAGACACAGATGGAGGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS GCA 72 bp CCCTCCATCTGTGTCTTTCTGGTCCGGAGATTCTGCTaGTTTGGTAACTTCATTTGGCTTCCCAGCAACATC +
Preference number: 6 (lower is better)
Translates to: PSICVFLVRRFC*FGNFIWLPSNI
Trigger: GATGTTGCTGGGAAGCCAAATGAAGTTACCAAAGCAGCAGAATCTCCGGACCAGAAAGACACAGATGGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS CCA 72 bp CTTTCCTCCTCCTTGGGCCCTCCATCTGTGTCTTTCTaGTCCGGAGATTCTGCTGCTTTGGTAACTTCATTT +
Preference number: 6 (lower is better)
Translates to: LSSSLGPPSVSF*SGDSAALVTSF
Trigger: AAATGAAGTTACCAAAGCAGCAGAATCTCCGGACCAGAAAGACACAGATGGAGGGCCCAAGGAGGAGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS CAA 90 bp TTGGGCCCTCCATCTGTGTCTTTCTGGTCCGGAGATTCTGCTGCTTaGGTAACTTCATTTGGCTTCCCAGCAACATCTATACTGGTCTCT +
Preference number: 6 (lower is better)
Translates to: LGPPSVSFWSGDSAA*VTSFGFPATSILVS
Trigger: AGAGACCAGTATAGATGTTGCTGGGAAGCCAAATGAAGTTACCAAAGCAGCAGAATCTCCGGACCAGAAAGACACAGATGGAGGGCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS CCA 72 bp CTGGTCCGGAGATTCTGCTGCTTTGGTAACTTCATTTaGCTTCCCAGCAACATCTATACTGGTCTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: LVRRFCCFGNFI*LPSNIYTGLFL
Trigger: GAGGAAGAGACCAGTATAGATGTTGCTGGGAAGCCAAATGAAGTTACCAAAGCAGCAGAATCTCCGGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS CCA 72 bp GCAGGTCAAATCCAAATATCTGATGAGATTCCAGGTTaGTCATTGCATCCATGTGCAGGGAGGATAGCATAC +
Preference number: 6 (lower is better)
Translates to: AGQIQISDEIPG*SLHPCAGRIAY
Trigger: GTATGCTATCCTCCCTGCACATGGATGCAATGACCAACCTGGAATCTCATCAGATATTTGGATTTGACCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679846.1
CDS CAA 72 bp CCATCTGTGTCTTTCTGGTCCGGAGATTCTGCTGCTTaGGTAACTTCATTTGGCTTCCCAGCAACATCTATA +
Preference number: 6 (lower is better)
Translates to: PSVSFWSGDSAA*VTSFGFPATSI
Trigger: TATAGATGTTGCTGGGAAGCCAAATGAAGTTACCAAAGCAGCAGAATCTCCGGACCAGAAAGACACAGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369626.8
ENST00000429288.2
ENST00000443580.6
ENST00000458229.6
ENST00000538576.5
ENST00000628110.2
ENST00000630362.4
ENST00000679803.1
CDS CAA 90 bp CCCATTCTCTCTTTTCACTTTTCTCAGACTCCAACTGGATATGGGTaGGACCTTCCCATGCTATCTACTCTCTTACTCTCCCTTCTATGT +
Preference number: 6 (lower is better)
Translates to: PILSFHFSQTPTGYG*DLPMLSTLLLSLLC
Trigger: ACATAGAAGGGAGAGTAAGAGAGTAGATAGCATGGGAAGGTCCAACCCATATCCAGTTGGAGTCTGAGAAAAGTGAAAAGAGAGAATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443580.6
ENST00000629508.2
CDS CAA 72 bp TCTTTTCACTTTTCTCAGACTCCAACTGGATATGGGTaGGACCTTCCCATGCTATCTACTCTCTTACTCTCC +
Preference number: 6 (lower is better)
Translates to: SFHFSQTPTGYG*DLPMLSTLLLS
Trigger: GGAGAGTAAGAGAGTAGATAGCATGGGAAGGTCCAACCCATATCCAGTTGGAGTCTGAGAAAAGTGAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443580.6
ENST00000629508.2
CDS CAA 72 bp CAAATCCAAATATCTGATGAGATTCCAGGTTGGTCATaGCATCCATGTGCAGGGAGGATAGCATACCCCAAT +
Preference number: 6 (lower is better)
Translates to: QIQISDEIPGWS*HPCAGRIAYPN
Trigger: ATTGGGGTATGCTATCCTCCCTGCACATGGATGCAATGACCAACCTGGAATCTCATCAGATATTTGGATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679846.1
CDS CCA 72 bp TCTCTCTTTTCACTTTTCTCAGACTCCAACTGGATATaGGTTGGACCTTCCCATGCTATCTACTCTCTTACT +
Preference number: 6 (lower is better)
Translates to: SLFSLFSDSNWI*VGPSHAIYSLT
Trigger: AGTAAGAGAGTAGATAGCATGGGAAGGTCCAACCCATATCCAGTTGGAGTCTGAGAAAAGTGAAAAGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443580.6
ENST00000629508.2
CDS CAA 90 bp AGCTCACTAATGTTTGCTTTCTGTCAGCATTCCCATCTTACATGCTaGTTTTGTAATAGACCCACATTAGTAGGGAGATATACTATACCT +
Preference number: 6 (lower is better)
Translates to: SSLMFAFCQHSHLTC*FCNRPTLVGRYTIP
Trigger: AGGTATAGTATATCTCCCTACTAATGTGGGTCTATTACAAAACAAGCATGTAAGATGGGAATGCTGACAGAAAGCAAACATTAGTGAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679846.1
CDS TCA 72 bp TATAAAGGAAACTGCTCCCTCACATCTACACAAGTATaGATGACAATGAATGACAAATCCTCCAAAATAAAC +
Preference number: 6 (lower is better)
Translates to: YKGNCSLTSTQV*MTMNDKSSKIN
Trigger: GTTTATTTTGGAGGATTTGTCATTCATTGTCATTCATACTTGTGTAGATGTGAGGGAGCAGTTTCCTTTATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481750.1
ENST00000627031.1