Pregenerated sensors for SLC15A5 (Homo sapiens)
Ensembl gene IDs: ENSG00000188991Ensembl transcript IDs: ENST00000344941.3
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ATATGGTCACAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGTACGCTTTCAATGGCTaGACCATTGTAGAAAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: IWSQCNKVTCNKGSLSVLYAFNG*TIVESC Trigger: ACAGCTTTCTACAATGGTTCAGCCATTGAAAGCGTA...CAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTGTGACCATAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| 3UTR-3UTR CCA 90 bp | ATATGGTCACAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGGTCATACGCTTTCAATaGCTGAACCATTGTAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: IWSQCNKVTCNKGSLSVLVIRFQ*LNHCRK Trigger: CTTTCTACAATGGTTCAGCCATTGAAAGCGTATGAC...CAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTGTGACCATAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR CCA 90 bp | ATATGGTCACAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGCCAGTGGACAGACGATaGCTCTTACGCCTCCAATGC | + |
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Preference number: 4 (lower is better) Translates to: IWSQCNKVTCNKGSLSVLPVDRR*LLRLQC Trigger: GCATTGGAGGCGTAAGAGCCATCGTCTGTCCACTGG...CAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTGTGACCATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR TCA 90 bp | CAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGAAAGAGAGTAAGGGCCCAGGCCTGTaGGTGCTGGATGTAAGATAT | + |
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Preference number: 4 (lower is better) Translates to: QCNKVTCNKGSLSVLKESKGPGL*VLDVRY Trigger: ATATCTTACATCCAGCACTCACAGGCCTGGGCCCTT...ACTCTCTTTCAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR TCA 90 bp | ATATGGTCACAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGAGTGAGAACTTTTCCTaGAAGGGGCTGCTCCACTGC | + |
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Preference number: 4 (lower is better) Translates to: IWSQCNKVTCNKGSLSVLSENFS*KGLLHC Trigger: GCAGTGGAGCAGCCCCTTTCAGGAAAAGTTCTCACT...CAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTGTGACCATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR GCA 90 bp | CAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGAAAGAGAGTGGCTTGTCACGTCTCTaGCAAGATGGCAGTATTGCG | + |
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Preference number: 4 (lower is better) Translates to: QCNKVTCNKGSLSVLKESGLSRL*QDGSIA Trigger: CGCAATACTGCCATCTTGGCAGAGACGTGACAAGCC...ACTCTCTTTCAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR CCA 90 bp | ATATGGTCACAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGGCCAAAAGCACCCAGTaGACAGACGATGGCTCTTAC | + |
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Preference number: 4 (lower is better) Translates to: IWSQCNKVTCNKGSLSVLAKSTQ*TDDGSY Trigger: GTAAGAGCCATCGTCTGTCCACTGGGTGCTTTTGGC...CAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTGTGACCATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR CCA 90 bp | ATATGGTCACAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGACGTCTCTGCCAAGATaGCAGTATTGCGGGTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: IWSQCNKVTCNKGSLSVLTSLPR*QYCGWH Trigger: ATGCCACCCGCAATACTGCCATCTTGGCAGAGACGT...CAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTGTGACCATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR TCA 90 bp | ATATGGTCACAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGTGTGATCCATACTCCTaGAGGCCAAAAGCACCCAGT | + |
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Preference number: 4 (lower is better) Translates to: IWSQCNKVTCNKGSLSVLCDPYS*RPKAPS Trigger: ACTGGGTGCTTTTGGCCTTCAGGAGTATGGATCACA...CAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTGTGACCATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR GCA 90 bp | ATATGGTCACAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGCTCTTACGCCTCCAATaGCAAGGCAAATGGTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: IWSQCNKVTCNKGSLSVLLLRLQ*QGKWSA Trigger: TGCTGACCATTTGCCTTGGCATTGGAGGCGTAAGAG...CAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTGTGACCATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR GCA 90 bp | ATATGGTCACAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGTTTCCTGAAAGGGGCTaGTCCACTGCAGGGAAATGT | + |
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Preference number: 4 (lower is better) Translates to: IWSQCNKVTCNKGSLSVLFPERG*STAGKC Trigger: ACATTTCCCTGCAGTGGAGCAGCCCCTTTCAGGAAA...CAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTGTGACCATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR GCA 90 bp | ATATGGTCACAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGCAACTTCACCAGCAGTaGCCCTGTGAAACAGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: IWSQCNKVTCNKGSLSVLQLHQQ*PCETAK Trigger: TTTGGCTGTTTCACAGGGGCACTGCTGGTGAAGTTG...CAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTGTGACCATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR CCA 90 bp | ATATGGTCACAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGTTGGCATGGTCTAACTaGCTTGTCACGTCTCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: IWSQCNKVTCNKGSLSVLLAWSN*LVTSLP Trigger: TGGCAGAGACGTGACAAGCCAGTTAGACCATGCCAA...CAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTGTGACCATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR TCA 90 bp | ATATGGTCACAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGGAAACAGGCAGGTGCTaGAATACTCCAGAAAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: IWSQCNKVTCNKGSLSVLETGRC*NTPEKE Trigger: CTCCTTTTCTGGAGTATTTCAGCACCTGCCTGTTTC...CAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTGTGACCATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR TCA 90 bp | CAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGAAAGAGAGTGCATGGAGGAAACAGTaGGAACTTTTCCTGAAAGGG | + |
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Preference number: 4 (lower is better) Translates to: QCNKVTCNKGSLSVLKESAWRKQ*ELFLKG Trigger: CCCTTTCAGGAAAAGTTCTCACTGTTTCCTCCATGC...ACTCTCTTTCAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR GCA 90 bp | ATATGGTCACAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGGTGGCATGTTTTCAGTaGACTAACCAACACCCCAAC | + |
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Preference number: 4 (lower is better) Translates to: IWSQCNKVTCNKGSLSVLVACFQ*TNQHPN Trigger: GTTGGGGTGTTGGTTAGTGCACTGAAAACATGCCAC...CAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTGTGACCATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR GCA 90 bp | CAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGAAAGAGAGTCCAAGATGGCAGTATTaGGGGTGGCATGTTTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: QCNKVTCNKGSLSVLKESPRWQY*GWHVFS Trigger: ACTGAAAACATGCCACCCGCAATACTGCCATCTTGG...ACTCTCTTTCAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR CCA 90 bp | ATATGGTCACAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGTGGCAGTATTGCGGGTaGCATGTTTTCAGTGCACTA | + |
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Preference number: 4 (lower is better) Translates to: IWSQCNKVTCNKGSLSVLWQYCG*HVFSAL Trigger: TAGTGCACTGAAAACATGCCACCCGCAATACTGCCA...CAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTGTGACCATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR CCA 90 bp | ATATGGTCACAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGTATTACAGAGAGGGCTaGGTTTACCAGTGTTTCCGC | + |
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Preference number: 4 (lower is better) Translates to: IWSQCNKVTCNKGSLSVLYYREG*VYQCFR Trigger: GCGGAAACACTGGTAAACCCAGCCCTCTCTGTAATA...CAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTGTGACCATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| 3UTR CAA 72 bp | CAATGGCTTTTAAACCTTAGGGAACATGAGAATGATTaGGGTGTGCTTATTAAAACCACCAATTGCTGGACC | + |
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Preference number: 4 (lower is better) Translates to: QWLLNLREHEND*GVLIKTTNCWT Trigger: GGTCCAGCAATTGGTGGTTTTAATAAGCACACCCAAATCATTCTCATGTTCCCTAAGGTTTAAAAGCCATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR TCA 90 bp | CAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGAAAGAGAGTAGAGAGGGAGAAGGGTaGGGAAAAATGTTGTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: QCNKVTCNKGSLSVLKESREGEG*GKMLCL Trigger: AAGACACAACATTTTTCCTCACCCTTCTCCCTCTCT...ACTCTCTTTCAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR TCA 90 bp | ATATGGTCACAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGGTAATGGTAGGCTGCTaGTGGCATTCATTACTGCAA | + |
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Preference number: 4 (lower is better) Translates to: IWSQCNKVTCNKGSLSVLVMVGC*WHSLLQ Trigger: TTGCAGTAATGAATGCCATCAGCAGCCTACCATTAC...CAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTGTGACCATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR TCA 90 bp | ATATGGTCACAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGTCATGGAGGTTCCTCTaGCATTGCTTGGAACAAATC | + |
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Preference number: 4 (lower is better) Translates to: IWSQCNKVTCNKGSLSVLSWRFL*HCLEQI Trigger: GATTTGTTCCAAGCAATGTCAGAGGAACCTCCATGA...CAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTGTGACCATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR GCA 90 bp | ATATGGTCACAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGGCAAATGGTCAGCAGTaGTACATAAAACAGCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: IWSQCNKVTCNKGSLSVLANGQQ*YIKQPV Trigger: CACAGGCTGTTTTATGTAGCACTGCTGACCATTTGC...CAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTGTGACCATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR TCA 90 bp | ATATGGTCACAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGTGGAACAAATCTGTATaGTATTACAGAGAGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: IWSQCNKVTCNKGSLSVLWNKSV*YYREGW Trigger: CCAGCCCTCTCTGTAATATCATACAGATTTGTTCCA...CAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTGTGACCATAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR TCA 90 bp | CAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGAAAGAGAGTCTGTCCTATCCAACATaGATTGTCCTGGAAAGCAAT | + |
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Preference number: 4 (lower is better) Translates to: QCNKVTCNKGSLSVLKESLSYPT*IVLESN Trigger: ATTGCTTTCCAGGACAATTCATGTTGGATAGGACAG...ACTCTCTTTCAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR GCA 90 bp | CAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGAAAGAGAGTAAAAGGGGATCATGTTaGAGACGACTTCAAAGAACG | + |
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Preference number: 4 (lower is better) Translates to: QCNKVTCNKGSLSVLKESKRGSC*RRLQRT Trigger: CGTTCTTTGAAGTCGTCTGCAACATGATCCCCTTTT...ACTCTCTTTCAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR GCA 90 bp | CAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGAAAGAGAGTGATGGCATTCATTACTaGAATCGGCAGAAGAAATCC | + |
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Preference number: 4 (lower is better) Translates to: QCNKVTCNKGSLSVLKESDGIHY*NRQKKS Trigger: GGATTTCTTCTGCCGATTGCAGTAATGAATGCCATC...ACTCTCTTTCAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR CCA 90 bp | CAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGAAAGAGAGTCAATGCCAAGGCAAATaGTCAGCAGTGCTACATAAA | + |
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Preference number: 4 (lower is better) Translates to: QCNKVTCNKGSLSVLKESQCQGK*SAVLHK Trigger: TTTATGTAGCACTGCTGACCATTTGCCTTGGCATTG...ACTCTCTTTCAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR CCA 90 bp | CAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGAAAGAGAGTCATCTCTATTTGGTTTaGTCACTTACCCTCCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: QCNKVTCNKGSLSVLKESHLYLV*SLTLLS Trigger: TGAGAGGAGGGTAAGTGACCAAACCAAATAGAGATG...ACTCTCTTTCAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR TCA 90 bp | CAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGAAAGAGAGTAATTGCCATCTGAGATaGGATATACCAACTTCACCA | + |
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Preference number: 4 (lower is better) Translates to: QCNKVTCNKGSLSVLKESNCHLR*DIPTSP Trigger: TGGTGAAGTTGGTATATCTCATCTCAGATGGCAATT...ACTCTCTTTCAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR TCA 90 bp | CAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGAAAGAGAGTTCCTCAACCAAATGTTaGCAAATACTGCTACTGAGA | + |
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Preference number: 4 (lower is better) Translates to: QCNKVTCNKGSLSVLKESSSTKC*QILLLR Trigger: TCTCAGTAGCAGTATTTGTCAACATTTGGTTGAGGA...ACTCTCTTTCAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR GCA 90 bp | CAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGAAAGAGAGTTGGTATGTTGTTAACTaGATGGTAAGTGCCCAGATA | + |
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Preference number: 4 (lower is better) Translates to: QCNKVTCNKGSLSVLKESWYVVN*MVSAQI Trigger: TATCTGGGCACTTACCATGCAGTTAACAACATACCA...ACTCTCTTTCAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR GCA 90 bp | CAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGAAAGAGAGTAGGGAGGTGCATAATTaGAGAATAATTTGCAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: QCNKVTCNKGSLSVLKESREVHN*RIICSQ Trigger: CTGACTGCAAATTATTCTGCAATTATGCACCTCCCT...ACTCTCTTTCAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR CCA 90 bp | CAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGAAAGAGAGTTTAAGCATCTCTATTTaGTTTGGTCACTTACCCTCC | + |
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Preference number: 4 (lower is better) Translates to: QCNKVTCNKGSLSVLKESLSISI*FGHLPS Trigger: GGAGGGTAAGTGACCAAACCAAATAGAGATGCTTAA...ACTCTCTTTCAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR CCA 90 bp | ATATGGTCACAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGCATCTGAATTGGCAGTaGAGACCGAAAGATGTTATT | + |
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Preference number: 4 (lower is better) Translates to: IWSQCNKVTCNKGSLSVLHLNWQ*RPKDVI Trigger: AATAACATCTTTCGGTCTCCACTGCCAATTCAGATG...CAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTGTGACCATAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR TCA 90 bp | ATATGGTCACAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGTCCTTCTCAATGCTGTaGTATAAGTGTACTTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: IWSQCNKVTCNKGSLSVLSFSML*YKCTFS Trigger: TGAGAAAGTACACTTATATCACAGCATTGAGAAGGA...CAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTGTGACCATAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR TCA 90 bp | CAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGAAAGAGAGTCACAGGGGTAAGTATTaGAGTTCCAATAAAACACAA | + |
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Preference number: 4 (lower is better) Translates to: QCNKVTCNKGSLSVLKESHRGKY*SSNKTQ Trigger: TTGTGTTTTATTGGAACTTCAATACTTACCCCTGTG...ACTCTCTTTCAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR TCA 90 bp | CAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGAAAGAGAGTTTGCAGATAATATCCTaGAGGAATCTGCATAATGCA | + |
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Preference number: 4 (lower is better) Translates to: QCNKVTCNKGSLSVLKESLQIIS*RNLHNA Trigger: TGCATTATGCAGATTCCTTCAGGATATTATCTGCAA...ACTCTCTTTCAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR TCA 90 bp | ATATGGTCACAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGAAACCAATTGCCATCTaGGATGAGATATACCAACTT | + |
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Preference number: 4 (lower is better) Translates to: IWSQCNKVTCNKGSLSVLKPIAI*DEIYQL Trigger: AAGTTGGTATATCTCATCTCAGATGGCAATTGGTTT...CAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTGTGACCATAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR CCA 90 bp | ATATGGTCACAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGTTCAGAGATTTTTCGTaGAGGAGAAGTGTTTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: IWSQCNKVTCNKGSLSVLFRDFS*RRSVSS Trigger: TGAAGAAACACTTCTCCTCCACGAAAAATCTCTGAA...CAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTGTGACCATAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR GCA 90 bp | ATATGGTCACAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGCAGATAACAAAGCAGTaGCTAGAAAATGTAGAAACA | + |
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Preference number: 4 (lower is better) Translates to: IWSQCNKVTCNKGSLSVLQITKQ*LENVET Trigger: TGTTTCTACATTTTCTAGGCACTGCTTTGTTATCTG...CAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTGTGACCATAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR CCA 90 bp | CAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGAAAGAGAGTCAACATGAATTGTCCTaGAAAGCAATGGCTTTTAAA | + |
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Preference number: 4 (lower is better) Translates to: QCNKVTCNKGSLSVLKESQHELS*KAMAFK Trigger: TTTAAAAGCCATTGCTTTCCAGGACAATTCATGTTG...ACTCTCTTTCAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS GCA 90 bp | GGCCAAAAGCACCCAGTGGACAGACGATGGCTCTTACGCCTCCAATaGCAAGGCAAATGGTCAGCAGTGCTACATAAAACAGCCTGTGCT | + |
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Preference number: 5 (lower is better) Translates to: GQKHPVDRRWLLRLQ*QGKWSAVLHKTACA Trigger: AGCACAGGCTGTTTTATGTAGCACTGCTGACCATTTGCCTTGGCATTGGAGGCGTAAGAGCCATCGTCTGTCCACTGGGTGCTTTTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS CCA 90 bp | GTGATCCATACTCCTGAAGGCCAAAAGCACCCAGTGGACAGACGATaGCTCTTACGCCTCCAATGCCAAGGCAAATGGTCAGCAGTGCTA | + |
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Preference number: 5 (lower is better) Translates to: VIHTPEGQKHPVDRR*LLRLQCQGKWSAVL Trigger: TAGCACTGCTGACCATTTGCCTTGGCATTGGAGGCGTAAGAGCCATCGTCTGTCCACTGGGTGCTTTTGGCCTTCAGGAGTATGGATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS GCA 90 bp | CACGTCTCTGCCAAGATGGCAGTATTGCGGGTGGCATGTTTTCAGTaGACTAACCAACACCCCAACGCCTGTCAGGAGAGAACAACGTTT | + |
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Preference number: 5 (lower is better) Translates to: HVSAKMAVLRVACFQ*TNQHPNACQERTTF Trigger: AAACGTTGTTCTCTCCTGACAGGCGTTGGGGTGTTGGTTAGTGCACTGAAAACATGCCACCCGCAATACTGCCATCTTGGCAGAGACGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS CCA 90 bp | CCAGTGGACAGACGATGGCTCTTACGCCTCCAATGCCAAGGCAAATaGTCAGCAGTGCTACATAAAACAGCCTGTGCTGCTCTGTTTTTG | + |
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Preference number: 5 (lower is better) Translates to: PVDRRWLLRLQCQGK*SAVLHKTACAALFL Trigger: CAAAAACAGAGCAGCACAGGCTGTTTTATGTAGCACTGCTGACCATTTGCCTTGGCATTGGAGGCGTAAGAGCCATCGTCTGTCCACTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS CCA 90 bp | TTTTCTTTGGCATGGTCTAACTGGCTTGTCACGTCTCTGCCAAGATaGCAGTATTGCGGGTGGCATGTTTTCAGTGCACTAACCAACACC | + |
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Preference number: 5 (lower is better) Translates to: FSLAWSNWLVTSLPR*QYCGWHVFSALTNT Trigger: GGTGTTGGTTAGTGCACTGAAAACATGCCACCCGCAATACTGCCATCTTGGCAGAGACGTGACAAGCCAGTTAGACCATGCCAAAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS GCA 90 bp | GACGATGGCTCTTACGCCTCCAATGCCAAGGCAAATGGTCAGCAGTaGTACATAAAACAGCCTGTGCTGCTCTGTTTTTGGTATGTTGTT | + |
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Preference number: 5 (lower is better) Translates to: DDGSYASNAKANGQQ*YIKQPVLLCFWYVV Trigger: AACAACATACCAAAAACAGAGCAGCACAGGCTGTTTTATGTAGCACTGCTGACCATTTGCCTTGGCATTGGAGGCGTAAGAGCCATCGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR CAA 90 bp | ATATGGTCACAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGGCCAAGATGGCAGTATaGCGGGTGGCATGTTTTCAG | + |
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Preference number: 5 (lower is better) Translates to: IWSQCNKVTCNKGSLSVLAKMAV*RVACFQ Trigger: CTGAAAACATGCCACCCGCAATACTGCCATCTTGGC...CAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTGTGACCATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR CAA 90 bp | ATATGGTCACAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGCATGGTCTAACTGGCTaGTCACGTCTCTGCCAAGAT | + |
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Preference number: 5 (lower is better) Translates to: IWSQCNKVTCNKGSLSVLHGLTG*SRLCQD Trigger: ATCTTGGCAGAGACGTGACAAGCCAGTTAGACCATG...CAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTGTGACCATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR CAA 90 bp | ATATGGTCACAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGGCATCTCTATTTGGTTaGGTCACTTACCCTCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: IWSQCNKVTCNKGSLSVLASLFG*VTYPPL Trigger: GAGAGGAGGGTAAGTGACCAAACCAAATAGAGATGC...CAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTGTGACCATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR CAA 90 bp | CAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGAAAGAGAGTCAAAAGGGGATCATGTaGCAGACGACTTCAAAGAAC | + |
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Preference number: 5 (lower is better) Translates to: QCNKVTCNKGSLSVLKESQKGIM*QTTSKN Trigger: GTTCTTTGAAGTCGTCTGCAACATGATCCCCTTTTG...ACTCTCTTTCAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR CAA 90 bp | CAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGAAAGAGAGTGAGGTTCCTCTGACATaGCTTGGAACAAATCTGTAT | + |
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Preference number: 5 (lower is better) Translates to: QCNKVTCNKGSLSVLKESEVPLT*LGTNLY Trigger: ATACAGATTTGTTCCAAGCAATGTCAGAGGAACCTC...ACTCTCTTTCAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR CAA 90 bp | CAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGAAAGAGAGTGTCCTCAACCAAATGTaGACAAATACTGCTACTGAG | + |
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Preference number: 5 (lower is better) Translates to: QCNKVTCNKGSLSVLKESVLNQM*TNTATE Trigger: CTCAGTAGCAGTATTTGTCAACATTTGGTTGAGGAC...ACTCTCTTTCAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR CAA 90 bp | ATATGGTCACAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGCCATCCAAATTCAGGTaGGAATTCATAGTTTGCAGA | + |
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Preference number: 5 (lower is better) Translates to: IWSQCNKVTCNKGSLSVLPSKFR*EFIVCR Trigger: TCTGCAAACTATGAATTCCAACCTGAATTTGGATGG...CAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTGTGACCATAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR CAA 90 bp | ATATGGTCACAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGTTTAAGCATCTCTATTaGGTTTGGTCACTTACCCTC | + |
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Preference number: 5 (lower is better) Translates to: IWSQCNKVTCNKGSLSVLFKHLY*VWSLTL Trigger: GAGGGTAAGTGACCAAACCAAATAGAGATGCTTAAA...CAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTGTGACCATAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR CAA 90 bp | CAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGAAAGAGAGTCTTTGTTTAATGTGTTaGGAAACCAATTGCCATCTG | + |
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Preference number: 5 (lower is better) Translates to: QCNKVTCNKGSLSVLKESLCLMC*ETNCHL Trigger: CAGATGGCAATTGGTTTCCAAACACATTAAACAAAG...ACTCTCTTTCAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS-3UTR CAA 90 bp | ATATGGTCACAATGTAATAAGGTCACGTGTAATAAGGGATCACTAAGTGTATTGGAACATGAGAATGATTaGGGTGTGCTTATTAAAACC | + |
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Preference number: 5 (lower is better) Translates to: IWSQCNKVTCNKGSLSVLEHEND*GVLIKT Trigger: GGTTTTAATAAGCACACCCAAATCATTCTCATGTTC...CAATACACTTAGTGATCCCTTATTACACGTGACCTTATTACATTGTGACCATAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS GCA 72 bp | GCCAAGATGGCAGTATTGCGGGTGGCATGTTTTCAGTaGACTAACCAACACCCCAACGCCTGTCAGGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: AKMAVLRVACFQ*TNQHPNACQER Trigger: TCTCTCCTGACAGGCGTTGGGGTGTTGGTTAGTGCACTGAAAACATGCCACCCGCAATACTGCCATCTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS CCA 72 bp | ACTCCTGAAGGCCAAAAGCACCCAGTGGACAGACGATaGCTCTTACGCCTCCAATGCCAAGGCAAATGGTCA | + |
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Preference number: 6 (lower is better) Translates to: TPEGQKHPVDRR*LLRLQCQGKWS Trigger: TGACCATTTGCCTTGGCATTGGAGGCGTAAGAGCCATCGTCTGTCCACTGGGTGCTTTTGGCCTTCAGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS GCA 72 bp | CACCCAGTGGACAGACGATGGCTCTTACGCCTCCAATaGCAAGGCAAATGGTCAGCAGTGCTACATAAAACA | + |
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Preference number: 6 (lower is better) Translates to: HPVDRRWLLRLQ*QGKWSAVLHKT Trigger: TGTTTTATGTAGCACTGCTGACCATTTGCCTTGGCATTGGAGGCGTAAGAGCCATCGTCTGTCCACTGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS GCA 72 bp | AACTGGCTTGTCACGTCTCTGCCAAGATGGCAGTATTaGGGGTGGCATGTTTTCAGTGCACTAACCAACACC | + |
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Preference number: 6 (lower is better) Translates to: NWLVTSLPRWQY*GWHVFSALTNT Trigger: GGTGTTGGTTAGTGCACTGAAAACATGCCACCCGCAATACTGCCATCTTGGCAGAGACGTGACAAGCCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS CCA 72 bp | AGACGATGGCTCTTACGCCTCCAATGCCAAGGCAAATaGTCAGCAGTGCTACATAAAACAGCCTGTGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: RRWLLRLQCQGK*SAVLHKTACAA Trigger: AGCAGCACAGGCTGTTTTATGTAGCACTGCTGACCATTTGCCTTGGCATTGGAGGCGTAAGAGCCATCGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS CCA 72 bp | GCATGGTCTAACTGGCTTGTCACGTCTCTGCCAAGATaGCAGTATTGCGGGTGGCATGTTTTCAGTGCACTA | + |
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Preference number: 6 (lower is better) Translates to: AWSNWLVTSLPR*QYCGWHVFSAL Trigger: TAGTGCACTGAAAACATGCCACCCGCAATACTGCCATCTTGGCAGAGACGTGACAAGCCAGTTAGACCATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS TCA 72 bp | AAAAGGGGATCATGTTGCAGACGACTTCAAAGAACGTaGACCTCTCACACAGCTCCACCAGAAGCAAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: KRGSCCRRLQRT*TSHTAPPEASR Trigger: TCTGCTTGCTTCTGGTGGAGCTGTGTGAGAGGTTCACGTTCTTTGAAGTCGTCTGCAACATGATCCCCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS GCA 72 bp | TTTCTTTGGCATGGTCTAACTGGCTTGTCACGTCTCTaGCAAGATGGCAGTATTGCGGGTGGCATGTTTTCA | + |
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Preference number: 6 (lower is better) Translates to: FLWHGLTGLSRL*QDGSIAGGMFS Trigger: TGAAAACATGCCACCCGCAATACTGCCATCTTGGCAGAGACGTGACAAGCCAGTTAGACCATGCCAAAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS TCA 72 bp | CCAGAAAAGGAGCCAGAATTAGTAATGGTAGGCTGCTaGTGGCATTCATTACTGCAATCGGCAGAAGAAATC | + |
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Preference number: 6 (lower is better) Translates to: PEKEPELVMVGC*WHSLLQSAEEI Trigger: GATTTCTTCTGCCGATTGCAGTAATGAATGCCATCAGCAGCCTACCATTACTAATTCTGGCTCCTTTTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS TCA 72 bp | GGAGGTTCCTCTGACATTGCTTGGAACAAATCTGTATaGTATTACAGAGAGGGCTGGGTTTACCAGTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: GGSSDIAWNKSV*YYREGWVYQCF Trigger: GAAACACTGGTAAACCCAGCCCTCTCTGTAATATCATACAGATTTGTTCCAAGCAATGTCAGAGGAACCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS CAA 90 bp | AATCCATTGAACAGTGTCAGAAAATTCATGGAGGTTCCTCTGACATaGCTTGGAACAAATCTGTATGATATTACAGAGAGGGCTGGGTTT | + |
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Preference number: 6 (lower is better) Translates to: NPLNSVRKFMEVPLT*LGTNLYDITERAGF Trigger: AAACCCAGCCCTCTCTGTAATATCATACAGATTTGTTCCAAGCAATGTCAGAGGAACCTCCATGAATTTTCTGACACTGTTCAATGGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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| CDS CAA 72 bp | AACAGTGTCAGAAAATTCATGGAGGTTCCTCTGACATaGCTTGGAACAAATCTGTATGATATTACAGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: NSVRKFMEVPLT*LGTNLYDITER Trigger: CCTCTCTGTAATATCATACAGATTTGTTCCAAGCAATGTCAGAGGAACCTCCATGAATTTTCTGACACTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344941.3 |
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