RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC15A2 (Homo sapiens)

Ensembl gene IDs: ENSG00000163406

Ensembl transcript IDs: ENST00000295605.6, ENST00000465060.1, ENST00000469013.1, ENST00000469422.1, ENST00000489711.6, ENST00000489886.1

Found 248 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGACGGGCAGACATAGAGTCTCTGGGGCCTTGTTTAAAGATGTACTaGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGG +
Preference number: 1 (lower is better)
Translates to: GRADIESLGPCLKMY*KTSPGTSVIGERWR
Trigger: CCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTTTAAACAAGGCCCCAGAGACTCTATGTCTGCCCGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
3UTR GCA 90 bp TATTTTCATGGTCATTTGGAGACACCAGGCCAGCTCCAGCAACACTaGACAAGTTTTAATGAGTTCACTGATGGACGGGCAGACATAGAG +
Preference number: 1 (lower is better)
Translates to: YFHGHLETPGQLQQH*TSFNEFTDGRADIE
Trigger: CTCTATGTCTGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCCTGGTGTCTCCAAATGACCATGAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489711.6
3UTR TCA 90 bp GTTACCTATAAAGGAATTCCCATAACTTTGCATACCCACAGAGAATaGTCTCCATTATACGTGTGTATTTTCATGGTCATTTGGAGACAC +
Preference number: 1 (lower is better)
Translates to: VTYKGIPITLHTHRE*SPLYVCIFMVIWRH
Trigger: GTGTCTCCAAATGACCATGAAAATACACACGTATAATGGAGATCATTCTCTGTGGGTATGCAAAGTTATGGGAATTCCTTTATAGGTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
3UTR-3UTR CCA 90 bp CAGGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGTGGAACTTCTGTCATTaGAGAAAGGTGGAGGAGATC +
Preference number: 2 (lower is better)
Translates to: QASSSNTAQVLMSSLMDGWNFCH*RKVEEI
Trigger: GATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCA...CCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
3UTR-3UTR CCA 90 bp CCAGGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGCTGGAAAACCAGTCCTaGAACTTCTGTCATTGGAGA +
Preference number: 2 (lower is better)
Translates to: PGQLQQHCTSFNEFTDGRLENQS*NFCHWR
Trigger: TCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAG...CCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
3UTR-3UTR GCA 90 bp ACTGATGGACGGGCAGACATAGAGTCTCTGGGGCCTTGTTTAAAGATGTACTGGTCAGCTCTGATATGCTaGTATCTCTCTTGTCTAATC +
Preference number: 2 (lower is better)
Translates to: TDGRADIESLGPCLKMYWSALIC*YLSCLI
Trigger: GATTAGACAAGAGAGATAGCAGCATATCAGAGCTGA...CCAGTACATCTTTAAACAAGGCCCCAGAGACTCTATGTCTGCCCGTCCATCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
3UTR CAA 90 bp CCACAGAGAATGATCTCCATTATACGTGTGTATTTTCATGGTCATTaGGAGACACCAGGCCAGCTCCAGCAACACTGCACAAGTTTTAAT +
Preference number: 2 (lower is better)
Translates to: PQRMISIIRVYFHGH*ETPGQLQQHCTSFN
Trigger: ATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCCTGGTGTCTCCAAATGACCATGAAAATACACACGTATAATGGAGATCATTCTCTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489711.6
3UTR-3UTR GCA 90 bp AAGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATCAGCTCTGATATaGTGCTATCTCTCTTGTCTA +
Preference number: 2 (lower is better)
Translates to: KMYWKTSPGTSVIGERWRRSALI*CYLSCL
Trigger: TAGACAAGAGAGATAGCAGCATATCAGAGCTGATCT...CCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
3UTR-3UTR GCA 90 bp TTAAAGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGATCAGCTCTGATATaGTGCTATCTCTCTTGTCTA +
Preference number: 2 (lower is better)
Translates to: LKMYWKTSPGTSVIGERWRSALI*CYLSCL
Trigger: TAGACAAGAGAGATAGCAGCATATCAGAGCTGATCT...CCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
3UTR CAA 90 bp CCAAAAACAACTCATGTTACCTTACACTGCATTAACAGAAGTGCATaGTTTGAAGAAAGGCAGGTGCTAGTTCTTCCAGTCAGACTACTT +
Preference number: 2 (lower is better)
Translates to: PKTTHVTLHCINRSA*FEERQVLVLPVRLL
Trigger: AAGTAGTCTGACTGGAAGAACTAGCACCTGCCTTTCTTCAAACAATGCACTTCTGTTAATGCAGTGTAAGGTAACATGAGTTGTTTTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489711.6
3UTR-3UTR GCA 90 bp TCTTCAGGATTTCTACAACTTACACCTGTTCCTGTTCTCCAGAACAATGTTTACTCAGCTCTGATATGCTaGTATCTCTCTTGTCTAATC +
Preference number: 2 (lower is better)
Translates to: SSGFLQLTPVPVLQNNVYSALIC*YLSCLI
Trigger: GATTAGACAAGAGAGATAGCAGCATATCAGAGCTGA...GTAAACATTGTTCTGGAGAACAGGAACAGGTGTAAGTTGTAGAAATCCTGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489711.6
3UTR GCA 72 bp GAGTGTGATGGCGTGATCTCGGCTCATTGCAACCTCTaGCTCCCGGGTTCAAGCAATTCTTCTGCTTCAGCC +
Preference number: 3 (lower is better)
Translates to: ECDGVISAHCNL*LPGSSNSSASA
Trigger: GGCTGAAGCAGAAGAATTGCTTGAACCCGGGAGGCAGAGGTTGCAATGAGCCGAGATCACGCCATCACACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489711.6
3UTR GCA 72 bp GGTCATTTGGAGACACCAGGCCAGCTCCAGCAACACTaGACAAGTTTTAATGAGTTCACTGATGGACGGGCA +
Preference number: 3 (lower is better)
Translates to: GHLETPGQLQQH*TSFNEFTDGRA
Trigger: TGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCCTGGTGTCTCCAAATGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
3UTR-3UTR CAA 90 bp ACTGATGGACGGGCAGACATAGAGTCTCTGGGGCCTTGTTTAAAGATGTACTGGCTGGAACTTCTGTCATaGGAGAAAGGTGGAGGAGAT +
Preference number: 3 (lower is better)
Translates to: TDGRADIESLGPCLKMYWLELLS*EKGGGD
Trigger: ATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAG...CCAGTACATCTTTAAACAAGGCCCCAGAGACTCTATGTCTGCCCGTCCATCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
3UTR-3UTR CAA 90 bp GTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATCATGCTGCTATCTCTCTaGTCTAATCCAGTAGAAGAA +
Preference number: 3 (lower is better)
Translates to: VLENQSWNFCHWRKVEEIMLLSL*SNPVEE
Trigger: TTCTTCTACTGGATTAGACAAGAGAGATAGCAGCAT...GATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
3UTR CCA 72 bp GACATAGAGTCTCTGGGGCCTTGTTTAAAGATGTACTaGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAA +
Preference number: 3 (lower is better)
Translates to: DIESLGPCLKMY*KTSPGTSVIGE
Trigger: TTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTTTAAACAAGGCCCCAGAGACTCTATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
3UTR CCA 72 bp TCTAAAGGAGTAGGGTCAGGTTCACATCAAGATATCTaGAAAAACTGGTTGGTCTGGCTGCCGCTCTTATAT +
Preference number: 3 (lower is better)
Translates to: SKGVGSGSHQDI*KNWLVWLPLLY
Trigger: ATATAAGAGCGGCAGCCAGACCAACCAGTTTTTCCAGATATCTTGATGTGAACCTGACCCTACTCCTTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489711.6
3UTR-3UTR CAA 90 bp TGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATATGCTGCTATCTCTCTaGTCTAATCCAGTAGAAGAA +
Preference number: 3 (lower is better)
Translates to: CTGKPVLELLSLEKGGGDMLLSL*SNPVEE
Trigger: TTCTTCTACTGGATTAGACAAGAGAGATAGCAGCAT...ATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
3UTR CCA 72 bp GAAAGGCAGGTGCTAGTTCTTCCAGTCAGACTACTTTaGAATGTTATATTTGACTCCAGGCACTTCATATTA +
Preference number: 3 (lower is better)
Translates to: ERQVLVLPVRLL*NVIFDSRHFIL
Trigger: TAATATGAAGTGCCTGGAGTCAAATATAACATTCCAAAGTAGTCTGACTGGAAGAACTAGCACCTGCCTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489711.6
3UTR GCA 72 bp CACATCAAGATATCTGGAAAAACTGGTTGGTCTGGCTaGCGCTCTTATATTTCTGAAATGCTTGTCATTAAA +
Preference number: 3 (lower is better)
Translates to: HIKISGKTGWSG*RSYISEMLVIK
Trigger: TTTAATGACAAGCATTTCAGAAATATAAGAGCGGCAGCCAGACCAACCAGTTTTTCCAGATATCTTGATGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489711.6
3UTR TCA 72 bp AAAGGAATTCCCATAACTTTGCATACCCACAGAGAATaGTCTCCATTATACGTGTGTATTTTCATGGTCATT +
Preference number: 3 (lower is better)
Translates to: KGIPITLHTHRE*SPLYVCIFMVI
Trigger: AATGACCATGAAAATACACACGTATAATGGAGATCATTCTCTGTGGGTATGCAAAGTTATGGGAATTCCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR CCA 90 bp GCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCAGACCACGAGTCAGCAATaGCTGCTCCCAGGATGGGAG +
Preference number: 4 (lower is better)
Translates to: ASSSNTAQVLMSSLMDGQTTSQQ*LLPGWE
Trigger: CTCCCATCCTGGGAGCAGCCATTGCTGACTCGTGGT...CTGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR GCA 90 bp CAGGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCACACTGCACAGTCGTaGCATTCCCGTGTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: QASSSNTAQVLMSSLMDGHTAQS*HSRVCP
Trigger: AGGACAGACACGGGAATGGCACGACTGTGCAGTGTG...CCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR CCA 90 bp GCCAGGCCCTGGCTGGACCAGATCACATCATACATACCAATTCTTGAGGCCCCTACAGATTGTCGGAGATaGCTTCTTTGGAGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: ARPWLDQITSYIPILEAPTDCRR*LLWRAR
Trigger: CCTAGCCCTCCAAAGAAGCCATCTCCGACAATCTGT...AGGGGCCTCAAGAATTGGTATGTATGATGTGATCTGGTCCAGCCAGGGCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR TCA 90 bp CCAGGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGCATCGTGAACCCTGCTaGTCCAAAAGAGCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: PGQLQQHCTSFNEFTDGRHREPC*SKRAQN
Trigger: GTTCTGGGCTCTTTTGGATCAGCAGGGTTCACGATG...CCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR GCA 90 bp AGAGCTGACAAGCCAGGCCCTGGCTGGACCAGATCACATCATACATACCAATTCGCCCAGTCTAGCCAGTaGTGTCGCTTTGGAATGTCT +
Preference number: 4 (lower is better)
Translates to: RADKPGPGWTRSHHTYQFAQSSQ*CRFGMS
Trigger: AGACATTCCAAAGCGACAGCACTGGCTAGACTGGGC...GAATTGGTATGTATGATGTGATCTGGTCCAGCCAGGGCCTGGCTTGTCAGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR CCA 90 bp CCAGGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCTAGGTGGTCGAGGTaGTACCTCTTCAATGGAGAC +
Preference number: 4 (lower is better)
Translates to: PGQLQQHCTSFNEFTDGRARWSR*YLFNGD
Trigger: GTCTCCATTGAAGAGGTACCACCTCGACCACCTAGC...CCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp AGAGCTGACAAGCCAGGCCCTGGCTGGACCAGATCACATCATACATACCAATTCGCTAGGTGGTCGAGGTaGTACCTCTTCAATGGAGAC +
Preference number: 4 (lower is better)
Translates to: RADKPGPGWTRSHHTYQFARWSR*YLFNGD
Trigger: GTCTCCATTGAAGAGGTACCACCTCGACCACCTAGC...GAATTGGTATGTATGATGTGATCTGGTCCAGCCAGGGCCTGGCTTGTCAGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR CCA 90 bp GATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGCGGAGATGGCTTCTTTaGAGGGCTAGGTGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: DVLENQSWNFCHWRKVEERRWLL*RARWSR
Trigger: CCTCGACCACCTAGCCCTCCAAAGAAGCCATCTCCG...CTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp GCCAGGCCCTGGCTGGACCAGATCACATCATACATACCAATTCTTGAGGCCCCTGAAGGCAATGCTCAGTaGATAGTTGGAGCCACAGAT +
Preference number: 4 (lower is better)
Translates to: ARPWLDQITSYIPILEAPEGNAQ*IVGATD
Trigger: ATCTGTGGCTCCAACTATCCACTGAGCATTGCCTTC...AGGGGCCTCAAGAATTGGTATGTATGATGTGATCTGGTCCAGCCAGGGCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR TCA 90 bp TTTAATGAGTTCACTGATGGACGGGCAGACATAGAGTCTCTGGGGCCTTGTTTACTGCCACACAGGGTTTaGTGCCTCCTGTCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: FNEFTDGRADIESLGPCLLPHRV*CLLSPK
Trigger: CTTTGGGGACAGGAGGCATCAAACCCTGTGTGGCAG...TAAACAAGGCCCCAGAGACTCTATGTCTGCCCGTCCATCAGTGAACTCATTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR TCA 90 bp AGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGACTGCCACACAGGGTTTaGTGCCTCCTGTCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: RCTGKPVLELLSLEKGGGLPHRV*CLLSPK
Trigger: CTTTGGGGACAGGAGGCATCAAACCCTGTGTGGCAG...TCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR TCA 90 bp AGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAACTCCTGACCTCAGGTaGTCCACCTGTCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: RCTGKPVLELLSLEKGGGTPDLR*STCLSL
Trigger: GAGGCTGAGACAGGTGGATCACCTGAGGTCAGGAGT...TCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR GCA 90 bp GGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCACAGGCCACTGAACTGTaGCACAACAAGCACGATGAT +
Preference number: 4 (lower is better)
Translates to: GQLQQHCTSFNEFTDGRAQATEL*HNKHDD
Trigger: ATCATCGTGCTTGTTGTGGCACAGTTCAGTGGCCTG...TGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR GCA 90 bp CCAGGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGCAGGCCACTGAACTGTaGCACAACAAGCACGATGAT +
Preference number: 4 (lower is better)
Translates to: PGQLQQHCTSFNEFTDGRQATEL*HNKHDD
Trigger: ATCATCGTGCTTGTTGTGGCACAGTTCAGTGGCCTG...CCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR GCA 90 bp GCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCAGAGGAATGTGCTTATCTaGTGGACCCCGCATATCCTC +
Preference number: 4 (lower is better)
Translates to: ASSSNTAQVLMSSLMDGQRNVLI*WTPHIL
Trigger: GAGGATATGCGGGGTCCAGCAGATAAGCACATTCCT...CTGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR GCA 90 bp GGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCATTCCTAGTAACACACTaGACAGTCGTGCCATTCCCG +
Preference number: 4 (lower is better)
Translates to: GQLQQHCTSFNEFTDGRAFLVTH*TVVPFP
Trigger: CGGGAATGGCACGACTGTGCAGTGTGTTACTAGGAA...TGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR GCA 90 bp GCCAGGCCCTGGCTGGACCAGATCACATCATACATACCAATTCTTGAGGCCCCTACTGGTTGGTCTGGCTaGCGCTCTTATATTTCTGAA +
Preference number: 4 (lower is better)
Translates to: ARPWLDQITSYIPILEAPTGWSG*RSYISE
Trigger: TTCAGAAATATAAGAGCGGCAGCCAGACCAACCAGT...AGGGGCCTCAAGAATTGGTATGTATGATGTGATCTGGTCCAGCCAGGGCCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR CCA 90 bp TGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATCGGAGATGGCTTCTTTaGAGGGCTAGGTGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: CTGKPVLELLSLEKGGGDRRWLL*RARWSR
Trigger: CCTCGACCACCTAGCCCTCCAAAGAAGCCATCTCCG...ATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp AAGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGACCACGAGTCAGCAATaGCTGCTCCCAGGATGGGAG +
Preference number: 4 (lower is better)
Translates to: KMYWKTSPGTSVIGERWRTTSQQ*LLPGWE
Trigger: CTCCCATCCTGGGAGCAGCCATTGCTGACTCGTGGT...CCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp CCAGGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGCCAGTGCTGTCGCTTTaGAATGTCTCCAGAACGGTT +
Preference number: 4 (lower is better)
Translates to: PGQLQQHCTSFNEFTDGRPVLSL*NVSRTV
Trigger: AACCGTTCTGGAGACATTCCAAAGCGACAGCACTGG...CCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp GGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCAGGGACCTGGCTGGGCTaGGGCCATTTCATTTATTTT +
Preference number: 4 (lower is better)
Translates to: GQLQQHCTSFNEFTDGRAGTWLG*GHFIYF
Trigger: AAAATAAATGAAATGGCCCCAGCCCAGCCAGGTCCC...TGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp CCAGGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGATATCTGGAAAAACTaGTTGGTCTGGCTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: PGQLQQHCTSFNEFTDGRDIWKN*LVWLPL
Trigger: GAGCGGCAGCCAGACCAACCAGTTTTTCCAGATATC...CCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR TCA 90 bp CCAGGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGGACAGGTAGAAGACTaGGAAGTATCTAGTCCGTTC +
Preference number: 4 (lower is better)
Translates to: PGQLQQHCTSFNEFTDGRGQVED*EVSSPF
Trigger: GAACGGACTAGATACTTCTCAGTCTTCTACCTGTCC...CCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR TCA 90 bp GGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCAGGACAGGTAGAAGACTaGGAAGTATCTAGTCCGTTC +
Preference number: 4 (lower is better)
Translates to: GQLQQHCTSFNEFTDGRAGQVED*EVSSPF
Trigger: GAACGGACTAGATACTTCTCAGTCTTCTACCTGTCC...TGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR TCA 90 bp CCAGGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGCAAGTGCAATTACCATaGGCAGTCCTGGAACTCCAA +
Preference number: 4 (lower is better)
Translates to: PGQLQQHCTSFNEFTDGRQVQLP*AVLELQ
Trigger: TTGGAGTTCCAGGACTGCTCATGGTAATTGCACTTG...CCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR GCA 90 bp GTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATCCGAGTCAGCAATGGCTaGTCCCAGGATGGGAGTAAA +
Preference number: 4 (lower is better)
Translates to: VLENQSWNFCHWRKVEEIRVSNG*SQDGSK
Trigger: TTTACTCCCATCCTGGGAGCAGCCATTGCTGACTCG...GATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR GCA 90 bp CAGGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGTTCATCCTGATGGCTTaGAAAGTCCATCGTGAACCC +
Preference number: 4 (lower is better)
Translates to: QASSSNTAQVLMSSLMDGFILMA*KVHREP
Trigger: GGGTTCACGATGGACTTTGCAAGCCATCAGGATGAA...CCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR GCA 90 bp CAGGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCAAACAAAACCCTCATaGTCTACCATCCCTACTCCC +
Preference number: 4 (lower is better)
Translates to: QASSSNTAQVLMSSLMDGQTKPS*STIPTP
Trigger: GGGAGTAGGGATGGTAGAGCATGAGGGTTTTGTTTG...CCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR GCA 90 bp TGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATAGGCATGAGCCACTGTaGCTGGCCGGCTGTTATACT +
Preference number: 4 (lower is better)
Translates to: CTGKPVLELLSLEKGGGDRHEPL*LAGCYT
Trigger: AGTATAACAGCCGGCCAGGCACAGTGGCTCATGCCT...ATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR GCA 90 bp CCAGGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGTTCAAGCAATTCTTCTaGTTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: PGQLQQHCTSFNEFTDGRFKQFF*FSLPSS
Trigger: GCTACTCGGGAGGCTGAAGCAGAAGAATTGCTTGAA...CCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR CCA 90 bp GGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCATCTGGAAAGGATTCATaGCTGGCTCCTTACTCTCTC +
Preference number: 4 (lower is better)
Translates to: GQLQQHCTSFNEFTDGRASGKDS*LAPYSL
Trigger: GAGAGAGTAAGGAGCCAGCCATGAATCCTTTCCAGA...TGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp AAGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGCTTTGGAGGGCTAGGTaGTCGAGGTGGTACCTCTTC +
Preference number: 4 (lower is better)
Translates to: KMYWKTSPGTSVIGERWRLWRAR*SRWYLF
Trigger: GAAGAGGTACCACCTCGACCACCTAGCCCTCCAAAG...CCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp CCAGGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGTACCATGAGCAGTCCTaGAACTCCAAAAGCCAATGC +
Preference number: 4 (lower is better)
Translates to: PGQLQQHCTSFNEFTDGRYHEQS*NSKSQC
Trigger: GCATTGGCTTTTGGAGTTCCAGGACTGCTCATGGTA...CCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp ACTGATGGACGGGCAGACATAGAGTCTCTGGGGCCTTGTTTAAAGATGTACTGGGGGACCTGGCTGGGCTaGGGCCATTTCATTTATTTT +
Preference number: 4 (lower is better)
Translates to: TDGRADIESLGPCLKMYWGTWLG*GHFIYF
Trigger: AAAATAAATGAAATGGCCCCAGCCCAGCCAGGTCCC...CCAGTACATCTTTAAACAAGGCCCCAGAGACTCTATGTCTGCCCGTCCATCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp GGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCAGTAGCTGCCACGCAATaGACATTTTGTTGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: GQLQQHCTSFNEFTDGRAVAATQ*TFCWLE
Trigger: TTCCAGCCAACAAAATGTCCATTGCGTGGCAGCTAC...TGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp GCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCAGAATGTGCTTATCTGCTaGACCCCGCATATCCTCTGT +
Preference number: 4 (lower is better)
Translates to: ASSSNTAQVLMSSLMDGQNVLIC*TPHILC
Trigger: ACAGAGGATATGCGGGGTCCAGCAGATAAGCACATT...CTGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp GATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGAAGCCAGGCCCTGGCTaGACCAGATCACATCATACA +
Preference number: 4 (lower is better)
Translates to: DVLENQSWNFCHWRKVEEKPGPG*TRSHHT
Trigger: TGTATGATGTGATCTGGTCCAGCCAGGGCCTGGCTT...CTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR CCA 90 bp AGAGCTGACAAGCCAGGCCCTGGCTGGACCAGATCACATCATACATACCAATTCATGAGCCACTGTGCCTaGCCGGCTGTTATACTTATT +
Preference number: 4 (lower is better)
Translates to: RADKPGPGWTRSHHTYQFMSHCA*PAVILI
Trigger: AATAAGTATAACAGCCGGCCAGGCACAGTGGCTCAT...GAATTGGTATGTATGATGTGATCTGGTCCAGCCAGGGCCTGGCTTGTCAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR TCA 90 bp GTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATCTCAAGCTCCCTGCATTaGTGGACAGGTAGAAGACTG +
Preference number: 4 (lower is better)
Translates to: VLENQSWNFCHWRKVEEISSSLH*WTGRRL
Trigger: CAGTCTTCTACCTGTCCATCAATGCAGGGAGCTTGA...GATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR TCA 90 bp CAGGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGTCCCATCTTCACGAATaGCAAGACTGTACCAGTTCT +
Preference number: 4 (lower is better)
Translates to: QASSSNTAQVLMSSLMDGSHLHE*QDCTSS
Trigger: AGAACTGGTACAGTCTTGTCATTCGTGAAGATGGGA...CCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR TCA 90 bp AGAGCTGACAAGCCAGGCCCTGGCTGGACCAGATCACATCATACATACCAATTCTCCCATCTTCACGAATaGCAAGACTGTACCAGTTCT +
Preference number: 4 (lower is better)
Translates to: RADKPGPGWTRSHHTYQFSHLHE*QDCTSS
Trigger: AGAACTGGTACAGTCTTGTCATTCGTGAAGATGGGA...GAATTGGTATGTATGATGTGATCTGGTCCAGCCAGGGCCTGGCTTGTCAGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR TCA 90 bp ACTGATGGACGGGCAGACATAGAGTCTCTGGGGCCTTGTTTAAAGATGTACTGGCATAGTAGTAGCCCATaGTGGAGAAGATCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: TDGRADIESLGPCLKMYWHSSSP*WRRSGR
Trigger: TCTGCCTGATCTTCTCCATCATGGGCTACTACTATG...CCAGTACATCTTTAAACAAGGCCCCAGAGACTCTATGTCTGCCCGTCCATCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR TCA 90 bp CAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCAGACATAGAGAGGCACCCAAGGACTTaGTCACATGGCCAAGCACAT +
Preference number: 4 (lower is better)
Translates to: QQHCTSFNEFTDGRADIERHPRT*SHGQAH
Trigger: ATGTGCTTGGCCATGTGATCAAGTCCTTGGGTGCCT...CTCTATGTCTGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR TCA 90 bp GCCAGGCCCTGGCTGGACCAGATCACATCATACATACCAATTCTTGAGGCCCCTATGATCTATCCATACTaGGAAAGGAGGGTTTGGATA +
Preference number: 4 (lower is better)
Translates to: ARPWLDQITSYIPILEAPMIYPY*ERRVWI
Trigger: TATCCAAACCCTCCTTTCTCAGTATGGATAGATCAT...AGGGGCCTCAAGAATTGGTATGTATGATGTGATCTGGTCCAGCCAGGGCCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR GCA 90 bp AGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGCCCAGTCTAGCCAGTaGTGTCGCTTTGGAATGTCT +
Preference number: 4 (lower is better)
Translates to: RCTGKPVLELLSLEKGGGAQSSQ*CRFGMS
Trigger: AGACATTCCAAAGCGACAGCACTGGCTAGACTGGGC...TCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR GCA 90 bp CCAGGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGTTTTATCTCTACAGCTaGCGCAACTGCAAATGCCAG +
Preference number: 4 (lower is better)
Translates to: PGQLQQHCTSFNEFTDGRFYLYS*RNCKCQ
Trigger: CTGGCATTTGCAGTTGCGGCAGCTGTAGAGATAAAA...CCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR GCA 90 bp CCAGGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGTGTTCTACAGTGCACTaGAGGGTATTCTCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: PGQLQQHCTSFNEFTDGRCSTVH*RVFSSL
Trigger: CAAAGAGGAGAATACCCTGCAGTGCACTGTAGAACA...CCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp GTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATCCCAGTGCTGTCGCTTTaGAATGTCTCCAGAACGGTT +
Preference number: 4 (lower is better)
Translates to: VLENQSWNFCHWRKVEEIPVLSL*NVSRTV
Trigger: AACCGTTCTGGAGACATTCCAAAGCGACAGCACTGG...GATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp ACTGATGGACGGGCAGACATAGAGTCTCTGGGGCCTTGTTTAAAGATGTACTGGGTAGCTGCCACGCAATaGACATTTTGTTGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: TDGRADIESLGPCLKMYWVAATQ*TFCWLE
Trigger: TTCCAGCCAACAAAATGTCCATTGCGTGGCAGCTAC...CCAGTACATCTTTAAACAAGGCCCCAGAGACTCTATGTCTGCCCGTCCATCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp CCAGGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGAATAGCCAAGCTGCCTaGAGCACAGATTTCATGCTA +
Preference number: 4 (lower is better)
Translates to: PGQLQQHCTSFNEFTDGRNSQAA*STDFML
Trigger: TAGCATGAAATCTGTGCTCCAGGCAGCTTGGCTATT...CCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp GCCAGGCCCTGGCTGGACCAGATCACATCATACATACCAATTCTTGAGGCCCCTTCACATCAAGATATCTaGAAAAACTGGTTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: ARPWLDQITSYIPILEAPSHQDI*KNWLVW
Trigger: CCAGACCAACCAGTTTTTCCAGATATCTTGATGTGA...AGGGGCCTCAAGAATTGGTATGTATGATGTGATCTGGTCCAGCCAGGGCCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR TCA 90 bp AGAGCTGACAAGCCAGGCCCTGGCTGGACCAGATCACATCATACATACCAATTCATTCATTCACCACAATaGAGGCAATGCTCAGTGGAT +
Preference number: 4 (lower is better)
Translates to: RADKPGPGWTRSHHTYQFIHSPQ*RQCSVD
Trigger: ATCCACTGAGCATTGCCTTCATTGTGGTGAATGAAT...GAATTGGTATGTATGATGTGATCTGGTCCAGCCAGGGCCTGGCTTGTCAGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR TCA 90 bp GGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCAAATTCCTATTCATCCTaGTGGCTTGCAAAGTCCATC +
Preference number: 4 (lower is better)
Translates to: GQLQQHCTSFNEFTDGRANSYSS*WLAKSI
Trigger: GATGGACTTTGCAAGCCATCAGGATGAATAGGAATT...TGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR TCA 90 bp CAGGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGAATTCCTATTCATCCTaGTGGCTTGCAAAGTCCATC +
Preference number: 4 (lower is better)
Translates to: QASSSNTAQVLMSSLMDGNSYSS*WLAKSI
Trigger: GATGGACTTTGCAAGCCATCAGGATGAATAGGAATT...CCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR TCA 90 bp ACTGATGGACGGGCAGACATAGAGTCTCTGGGGCCTTGTTTAAAGATGTACTGGCCACAACAAGCACGATaGTATTCCCAACTGCAATTG +
Preference number: 4 (lower is better)
Translates to: TDGRADIESLGPCLKMYWPQQAR*YSQLQL
Trigger: CAATTGCAGTTGGGAATATCATCGTGCTTGTTGTGG...CCAGTACATCTTTAAACAAGGCCCCAGAGACTCTATGTCTGCCCGTCCATCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR TCA 90 bp GATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGGGAGGAGATCAGCTCTaGTATGCTGCTATCTCTCTT +
Preference number: 4 (lower is better)
Translates to: DVLENQSWNFCHWRKVEEGGDQL*YAAISL
Trigger: AAGAGAGATAGCAGCATATCAGAGCTGATCTCCTCC...CTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR TCA 90 bp GCCAGGCCCTGGCTGGACCAGATCACATCATACATACCAATTCTTGAGGCCCCTCTAATCTGGTTTCCATaGTCTATCCATACTGAGAAA +
Preference number: 4 (lower is better)
Translates to: ARPWLDQITSYIPILEAPLIWFP*SIHTEK
Trigger: TTTCTCAGTATGGATAGATCATGGAAACCAGATTAG...AGGGGCCTCAAGAATTGGTATGTATGATGTGATCTGGTCCAGCCAGGGCCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR TCA 90 bp GCCAGGCCCTGGCTGGACCAGATCACATCATACATACCAATTCTTGAGGCCCCTAGGTGCCTGTTAACATaGACATTGTTACGTATTAAC +
Preference number: 4 (lower is better)
Translates to: ARPWLDQITSYIPILEAPRCLLT*TLLRIN
Trigger: GTTAATACGTAACAATGTTCATGTTAACAGGCACCT...AGGGGCCTCAAGAATTGGTATGTATGATGTGATCTGGTCCAGCCAGGGCCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR GCA 90 bp CAGGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGAGAAATCAAGCTCCCTaGATTGATGGACAGGTAGAA +
Preference number: 4 (lower is better)
Translates to: QASSSNTAQVLMSSLMDGRNQAP*IDGQVE
Trigger: TTCTACCTGTCCATCAATGCAGGGAGCTTGATTTCT...CCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR GCA 90 bp CAGGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGTGCAAACACAACAAGTaGAATTACCATGAGCAGTCC +
Preference number: 4 (lower is better)
Translates to: QASSSNTAQVLMSSLMDGCKHNK*NYHEQS
Trigger: GGACTGCTCATGGTAATTGCACTTGTTGTGTTTGCA...CCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR GCA 90 bp AAGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGGAATGTGCTTATCTaGTGGACCCCGCATATCCTC +
Preference number: 4 (lower is better)
Translates to: KMYWKTSPGTSVIGERWRRNVLI*WTPHIL
Trigger: GAGGATATGCGGGGTCCAGCAGATAAGCACATTCCT...CCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp GTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATCTCTGGAAAGGATTCATaGCTGGCTCCTTACTCTCTC +
Preference number: 4 (lower is better)
Translates to: VLENQSWNFCHWRKVEEISGKDS*LAPYSL
Trigger: GAGAGAGTAAGGAGCCAGCCATGAATCCTTTCCAGA...GATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp AAGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGACAGATTGTCGGAGATaGCTTCTTTGGAGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: KMYWKTSPGTSVIGERWRTDCRR*LLWRAR
Trigger: CCTAGCCCTCCAAAGAAGCCATCTCCGACAATCTGT...CCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp CAGGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGAAAGGAATAGTACCCTaGTCAGTGCCTTTACATCCA +
Preference number: 4 (lower is better)
Translates to: QASSSNTAQVLMSSLMDGKGIVP*SVPLHP
Trigger: TGGATGTAAAGGCACTGACCAGGGTACTATTCCTTT...CCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp AGAGCTGACAAGCCAGGCCCTGGCTGGACCAGATCACATCATACATACCAATTCAAAGGAATAGTACCCTaGTCAGTGCCTTTACATCCA +
Preference number: 4 (lower is better)
Translates to: RADKPGPGWTRSHHTYQFKGIVP*SVPLHP
Trigger: TGGATGTAAAGGCACTGACCAGGGTACTATTCCTTT...GAATTGGTATGTATGATGTGATCTGGTCCAGCCAGGGCCTGGCTTGTCAGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR CCA 90 bp CCAGGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGCCTTTACCATCATGCTaGAGATACTGTTCCCATCTT +
Preference number: 4 (lower is better)
Translates to: PGQLQQHCTSFNEFTDGRPLPSC*RYCSHL
Trigger: AAGATGGGAACAGTATCTCCAGCATGATGGTAAAGG...CCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp GATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGAATGTGCTTATCTGCTaGACCCCGCATATCCTCTGT +
Preference number: 4 (lower is better)
Translates to: DVLENQSWNFCHWRKVEENVLIC*TPHILC
Trigger: ACAGAGGATATGCGGGGTCCAGCAGATAAGCACATT...CTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR TCA 90 bp GGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCATCAATGATAGGACTTTaGATTTTCCCAACCACGAGT +
Preference number: 4 (lower is better)
Translates to: GQLQQHCTSFNEFTDGRASMIGL*IFPTTS
Trigger: ACTCGTGGTTGGGAAAATTCAAAGTCCTATCATTGA...TGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295605.6
CDS-3UTR TCA 90 bp CAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCAGACATAGAGCAAGTGCAATTACCATaGGCAGTCCTGGAACTCCAA +
Preference number: 4 (lower is better)
Translates to: QQHCTSFNEFTDGRADIEQVQLP*AVLELQ
Trigger: TTGGAGTTCCAGGACTGCTCATGGTAATTGCACTTG...CTCTATGTCTGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR TCA 90 bp GTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATCTCTTGGTCTCTAGTTTaGTCATGTTCCCCTGGATGT +
Preference number: 4 (lower is better)
Translates to: VLENQSWNFCHWRKVEEISWSLV*SCSPGC
Trigger: ACATCCAGGGGAACATGATCAAACTAGAGACCAAGA...GATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR TCA 90 bp TCTTCAGGATTTCTACAACTTACACCTGTTCCTGTTCTCCAGAACAATGTTTACTCAAACCTAGAGAGCTaGCAAGCCAGGCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SSGFLQLTPVPVLQNNVYSNLES*QARPWL
Trigger: CAGCCAGGGCCTGGCTTGTCAGCTCTCTAGGTTTGA...GTAAACATTGTTCTGGAGAACAGGAACAGGTGTAAGTTGTAGAAATCCTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR GCA 90 bp GGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCAAACTCCAAAAGCCAATaGATAGCAGTCTTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: GQLQQHCTSFNEFTDGRANSKSQ*IAVFSK
Trigger: TTTGGAGAAGACTGCTATGCATTGGCTTTTGGAGTT...TGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR GCA 90 bp AAGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGTTCATCCTGATGGCTTaGAAAGTCCATCGTGAACCC +
Preference number: 4 (lower is better)
Translates to: KMYWKTSPGTSVIGERWRFILMA*KVHREP
Trigger: GGGTTCACGATGGACTTTGCAAGCCATCAGGATGAA...CCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR GCA 90 bp CAGGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGTATCCTTTACCATCATaGTGGAGATACTGTTCCCAT +
Preference number: 4 (lower is better)
Translates to: QASSSNTAQVLMSSLMDGYPLPS*WRYCSH
Trigger: ATGGGAACAGTATCTCCAGCATGATGGTAAAGGATA...CCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR GCA 90 bp GGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCATATCCTTTACCATCATaGTGGAGATACTGTTCCCAT +
Preference number: 4 (lower is better)
Translates to: GQLQQHCTSFNEFTDGRAYPLPS*WRYCSH
Trigger: ATGGGAACAGTATCTCCAGCATGATGGTAAAGGATA...TGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp AGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGAAGGCAATGCTCAGTaGATAGTTGGAGCCACAGAT +
Preference number: 4 (lower is better)
Translates to: RCTGKPVLELLSLEKGGGEGNAQ*IVGATD
Trigger: ATCTGTGGCTCCAACTATCCACTGAGCATTGCCTTC...TCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp GTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATCAGGCTGCTGAAGGCATaGTATATAGATGTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: VLENQSWNFCHWRKVEEIRLLKA*YIDVEV
Trigger: TACCTCCACATCTATATACCATGCCTTCAGCAGCCT...GATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp TGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATTACCATGAGCAGTCCTaGAACTCCAAAAGCCAATGC +
Preference number: 4 (lower is better)
Translates to: CTGKPVLELLSLEKGGGDYHEQS*NSKSQC
Trigger: GCATTGGCTTTTGGAGTTCCAGGACTGCTCATGGTA...ATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp GTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATCCATAATGAGCTGCTTTaGATATTTCTCAGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: VLENQSWNFCHWRKVEEIHNELL*IFLSRP
Trigger: TGGGCGGCTGAGAAATATCCAAAGCAGCTCATTATG...GATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp ACTGATGGACGGGCAGACATAGAGTCTCTGGGGCCTTGTTTAAAGATGTACTGGCCTTTACCATCATGCTaGAGATACTGTTCCCATCTT +
Preference number: 4 (lower is better)
Translates to: TDGRADIESLGPCLKMYWPLPSC*RYCSHL
Trigger: AAGATGGGAACAGTATCTCCAGCATGATGGTAAAGG...CCAGTACATCTTTAAACAAGGCCCCAGAGACTCTATGTCTGCCCGTCCATCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp GTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATCAAGGACTTGATCACATaGCCAAGCACATACACCAAG +
Preference number: 4 (lower is better)
Translates to: VLENQSWNFCHWRKVEEIKDLIT*PSTYTK
Trigger: CTTGGTGTATGTGCTTGGCCATGTGATCAAGTCCTT...GATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR CCA 90 bp CAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCAGACATAGAGTCTGGAAAAACTGGTTaGTCTGGCTGCCGCTCTTAT +
Preference number: 4 (lower is better)
Translates to: QQHCTSFNEFTDGRADIESGKTG*SGCRSY
Trigger: ATAAGAGCGGCAGCCAGACCAACCAGTTTTTCCAGA...CTCTATGTCTGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR TCA 90 bp GTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATCAGACCAGACGATAAATaGCAAAGTCAAACAACGGGA +
Preference number: 4 (lower is better)
Translates to: VLENQSWNFCHWRKVEEIRPDDK*QSQTTG
Trigger: TCCCGTTGTTTGACTTTGTCATTTATCGTCTGGTCT...GATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR TCA 90 bp GCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCAGTATTTCAGGTGGAAGTaGAAATCCTGGCTTTTTGTT +
Preference number: 4 (lower is better)
Translates to: ASSSNTAQVLMSSLMDGQYFRWK*KSWLFV
Trigger: AACAAAAAGCCAGGATTTTCACTTCCACCTGAAATA...CTGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR TCA 90 bp GATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGAGTCTTCACCAACATTaGGAGAGGTATCTGTACTCA +
Preference number: 4 (lower is better)
Translates to: DVLENQSWNFCHWRKVEESLHQH*ERYLYS
Trigger: TGAGTACAGATACCTCTCTCAATGTTGGTGAAGACT...CTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR TCA 90 bp AGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGACCACAACAAGCACGATaGTATTCCCAACTGCAATTG +
Preference number: 4 (lower is better)
Translates to: RCTGKPVLELLSLEKGGGPQQAR*YSQLQL
Trigger: CAATTGCAGTTGGGAATATCATCGTGCTTGTTGTGG...TCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR TCA 90 bp CAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCAGACATAGAGTCTTGGTCTCTAGTTTaGTCATGTTCCCCTGGATGT +
Preference number: 4 (lower is better)
Translates to: QQHCTSFNEFTDGRADIESWSLV*SCSPGC
Trigger: ACATCCAGGGGAACATGATCAAACTAGAGACCAAGA...CTCTATGTCTGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR TCA 90 bp CAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCAGACATAGAGCTGGATCAGCAAGGTTaGCAAGACAAGGTTGCAAAT +
Preference number: 4 (lower is better)
Translates to: QQHCTSFNEFTDGRADIELDQQG*QDKVAN
Trigger: ATTTGCAACCTTGTCTTGTCAACCTTGCTGATCCAG...CTCTATGTCTGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR TCA 90 bp TGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATACAAATTATGCCTGGTaGGGAACCATTACAGGAACC +
Preference number: 4 (lower is better)
Translates to: CTGKPVLELLSLEKGGGDTNYAW*GTITGT
Trigger: GGTTCCTGTAATGGTTCCTCACCAGGCATAATTTGT...ATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR TCA 90 bp AGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGACAGAAGTGCATTGTTTaGAGAAAGGCAGGTGCTAGT +
Preference number: 4 (lower is better)
Translates to: RCTGKPVLELLSLEKGGGQKCIV*RKAGAS
Trigger: ACTAGCACCTGCCTTTCTTCAAACAATGCACTTCTG...TCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR GCA 90 bp ACTGATGGACGGGCAGACATAGAGTCTCTGGGGCCTTGTTTAAAGATGTACTGGTCTAGTCCGTTCCTCTaGATGTTTTTCTTCAAACTG +
Preference number: 4 (lower is better)
Translates to: TDGRADIESLGPCLKMYWSSPFL*MFFFKL
Trigger: CAGTTTGAAGAAAAACATGCAGAGGAACGGACTAGA...CCAGTACATCTTTAAACAAGGCCCCAGAGACTCTATGTCTGCCCGTCCATCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR GCA 90 bp AAGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGTTTTATCTCTACAGCTaGCGCAACTGCAAATGCCAG +
Preference number: 4 (lower is better)
Translates to: KMYWKTSPGTSVIGERWRFYLYS*RNCKCQ
Trigger: CTGGCATTTGCAGTTGCGGCAGCTGTAGAGATAAAA...CCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR GCA 90 bp CAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCAGACATAGAGGCATATTGTGGTAGCTaGCACGCAATGGACATTTTG +
Preference number: 4 (lower is better)
Translates to: QQHCTSFNEFTDGRADIEAYCGS*HAMDIL
Trigger: CAAAATGTCCATTGCGTGGCAGCTACCACAATATGC...CTCTATGTCTGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR GCA 90 bp ACTGATGGACGGGCAGACATAGAGTCTCTGGGGCCTTGTTTAAAGATGTACTGGAGATCAGCTCTGATATaGTGCTATCTCTCTTGTCTA +
Preference number: 4 (lower is better)
Translates to: TDGRADIESLGPCLKMYWRSALI*CYLSCL
Trigger: TAGACAAGAGAGATAGCAGCATATCAGAGCTGATCT...CCAGTACATCTTTAAACAAGGCCCCAGAGACTCTATGTCTGCCCGTCCATCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR GCA 90 bp GTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATCCAGCTCCAGCAACACTaGACAAGTTTTAATGAGTTC +
Preference number: 4 (lower is better)
Translates to: VLENQSWNFCHWRKVEEIQLQQH*TSFNEF
Trigger: GAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTG...GATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR GCA 90 bp TGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATCCTCACATAGGACCATaGTCCTCTATTGACATTTCC +
Preference number: 4 (lower is better)
Translates to: CTGKPVLELLSLEKGGGDPHIGP*SSIDIS
Trigger: GGAAATGTCAATAGAGGAGCATGGTCCTATGTGAGG...ATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR CCA 90 bp AGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGACATAATGAGCTGCTTTaGATATTTCTCAGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: RCTGKPVLELLSLEKGGGHNELL*IFLSRP
Trigger: TGGGCGGCTGAGAAATATCCAAAGCAGCTCATTATG...TCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp CAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCAGACATAGAGAATAGCCAAGCTGCCTaGAGCACAGATTTCATGCTA +
Preference number: 4 (lower is better)
Translates to: QQHCTSFNEFTDGRADIENSQAA*STDFML
Trigger: TAGCATGAAATCTGTGCTCCAGGCAGCTTGGCTATT...CTCTATGTCTGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp TTTAATGAGTTCACTGATGGACGGGCAGACATAGAGTCTCTGGGGCCTTGTTTATGGAACTTCTGTCATTaGAGAAAGGTGGAGGAGATC +
Preference number: 4 (lower is better)
Translates to: FNEFTDGRADIESLGPCLWNFCH*RKVEEI
Trigger: GATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCA...TAAACAAGGCCCCAGAGACTCTATGTCTGCCCGTCCATCAGTGAACTCATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp AAGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGTGGAACTTCTGTCATTaGAGAAAGGTGGAGGAGATC +
Preference number: 4 (lower is better)
Translates to: KMYWKTSPGTSVIGERWRWNFCH*RKVEEI
Trigger: GATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCA...CCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp TGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATCTGGAAAACCAGTCCTaGAACTTCTGTCATTGGAGA +
Preference number: 4 (lower is better)
Translates to: CTGKPVLELLSLEKGGGDLENQS*NFCHWR
Trigger: TCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAG...ATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp GGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCATGTTTAAAGATGTACTaGAAAACCAGTCCTGGAACT +
Preference number: 4 (lower is better)
Translates to: GQLQQHCTSFNEFTDGRACLKMY*KTSPGT
Trigger: AGTTCCAGGACTGGTTTTCCAGTACATCTTTAAACA...TGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp GATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGACGTGTGTATTTTCATaGTCATTTGGAGACACCAGG +
Preference number: 4 (lower is better)
Translates to: DVLENQSWNFCHWRKVEETCVFS*SFGDTR
Trigger: CCTGGTGTCTCCAAATGACCATGAAAATACACACGT...CTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489711.6
3UTR CAA 72 bp ATGATCTCCATTATACGTGTGTATTTTCATGGTCATTaGGAGACACCAGGCCAGCTCCAGCAACACTGCACA +
Preference number: 4 (lower is better)
Translates to: MISIIRVYFHGH*ETPGQLQQHCT
Trigger: TGTGCAGTGTTGCTGGAGCTGGCCTGGTGTCTCCAAATGACCATGAAAATACACACGTATAATGGAGATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR TCA 90 bp TCTTCAGGATTTCTACAACTTACACCTGTTCCTGTTCTCCAGAACAATGTTTACCATCGTGAACCCTGCTaGTCCAAAAGAGCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: SSGFLQLTPVPVLQNNVYHREPC*SKRAQN
Trigger: GTTCTGGGCTCTTTTGGATCAGCAGGGTTCACGATG...GTAAACATTGTTCTGGAGAACAGGAACAGGTGTAAGTTGTAGAAATCCTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR TCA 90 bp TGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATAGACCAGACGATAAATaGCAAAGTCAAACAACGGGA +
Preference number: 4 (lower is better)
Translates to: CTGKPVLELLSLEKGGGDRPDDK*QSQTTG
Trigger: TCCCGTTGTTTGACTTTGTCATTTATCGTCTGGTCT...ATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR TCA 90 bp ACTGATGGACGGGCAGACATAGAGTCTCTGGGGCCTTGTTTAAAGATGTACTGGTTTTCTGAAAGGATTTaGTGGACTCTATCAACAGAG +
Preference number: 4 (lower is better)
Translates to: TDGRADIESLGPCLKMYWFSERI*WTLSTE
Trigger: CTCTGTTGATAGAGTCCATCAAATCCTTTCAGAAAA...CCAGTACATCTTTAAACAAGGCCCCAGAGACTCTATGTCTGCCCGTCCATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR TCA 90 bp ACTGATGGACGGGCAGACATAGAGTCTCTGGGGCCTTGTTTAAAGATGTACTGGTATTTCAGGTGGAAGTaGAAATCCTGGCTTTTTGTT +
Preference number: 4 (lower is better)
Translates to: TDGRADIESLGPCLKMYWYFRWK*KSWLFV
Trigger: AACAAAAAGCCAGGATTTTCACTTCCACCTGAAATA...CCAGTACATCTTTAAACAAGGCCCCAGAGACTCTATGTCTGCCCGTCCATCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR TCA 90 bp TTAAAGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGGGAGGAGATCAGCTCTaGTATGCTGCTATCTCTCTT +
Preference number: 4 (lower is better)
Translates to: LKMYWKTSPGTSVIGERWGGDQL*YAAISL
Trigger: AAGAGAGATAGCAGCATATCAGAGCTGATCTCCTCC...CCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR TCA 90 bp CAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCAGACATAGAGCATACCCACAGAGAATaGTCTCCATTATACGTGTGT +
Preference number: 4 (lower is better)
Translates to: QQHCTSFNEFTDGRADIEHTHRE*SPLYVC
Trigger: ACACACGTATAATGGAGATCATTCTCTGTGGGTATG...CTCTATGTCTGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR GCA 90 bp TCTTCAGGATTTCTACAACTTACACCTGTTCCTGTTCTCCAGAACAATGTTTACCGAGTCAGCAATGGCTaGTCCCAGGATGGGAGTAAA +
Preference number: 4 (lower is better)
Translates to: SSGFLQLTPVPVLQNNVYRVSNG*SQDGSK
Trigger: TTTACTCCCATCCTGGGAGCAGCCATTGCTGACTCG...GTAAACATTGTTCTGGAGAACAGGAACAGGTGTAAGTTGTAGAAATCCTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR GCA 90 bp GTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATCTCAGCTCTGATATGCTaGTATCTCTCTTGTCTAATC +
Preference number: 4 (lower is better)
Translates to: VLENQSWNFCHWRKVEEISALIC*YLSCLI
Trigger: GATTAGACAAGAGAGATAGCAGCATATCAGAGCTGA...GATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp TGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATAAAGAGCCCAGAACATaGGCAATGGGATATAAAGGA +
Preference number: 4 (lower is better)
Translates to: CTGKPVLELLSLEKGGGDKEPRT*AMGYKG
Trigger: TCCTTTATATCCCATTGCCCATGTTCTGGGCTCTTT...ATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp ACTGATGGACGGGCAGACATAGAGTCTCTGGGGCCTTGTTTAAAGATGTACTGGTTTTCAGGTGCAGTTTaGAATAGTGTGGTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: TDGRADIESLGPCLKMYWFSGAV*NSVVFS
Trigger: AGAAAACACCACACTATTCCAAACTGCACCTGAAAA...CCAGTACATCTTTAAACAAGGCCCCAGAGACTCTATGTCTGCCCGTCCATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp AGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGACGGTTGTCATCCCATTaGTTGTTCTGCTTTCTGTAT +
Preference number: 4 (lower is better)
Translates to: RCTGKPVLELLSLEKGGGRLSSH*LFCFLY
Trigger: ATACAGAAAGCAGAACAACCAATGGGATGACAACCG...TCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp GATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGGGACATTTTGTTGGCTaGAATGTCTTCAATCTTCCA +
Preference number: 4 (lower is better)
Translates to: DVLENQSWNFCHWRKVEEGHFVG*NVFNLP
Trigger: TGGAAGATTGAAGACATTCCAGCCAACAAAATGTCC...CTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp AGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAAAAAACTGGTTGGTCTaGCTGCCGCTCTTATATTTC +
Preference number: 4 (lower is better)
Translates to: RCTGKPVLELLSLEKGGGKNWLV*LPLLYF
Trigger: GAAATATAAGAGCGGCAGCCAGACCAACCAGTTTTT...TCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR TCA 90 bp GTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATCTTTTCTGAAAGGATTTaGTGGACTCTATCAACAGAG +
Preference number: 4 (lower is better)
Translates to: VLENQSWNFCHWRKVEEIFSERI*WTLSTE
Trigger: CTCTGTTGATAGAGTCCATCAAATCCTTTCAGAAAA...GATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR TCA 90 bp TTTAATGAGTTCACTGATGGACGGGCAGACATAGAGTCTCTGGGGCCTTGTTTATACTCAGGGAGATGTTaGCATCTTTATGCAAAGTGT +
Preference number: 4 (lower is better)
Translates to: FNEFTDGRADIESLGPCLYSGRC*HLYAKC
Trigger: ACACTTTGCATAAAGATGTCAACATCTCCCTGAGTA...TAAACAAGGCCCCAGAGACTCTATGTCTGCCCGTCCATCAGTGAACTCATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR TCA 90 bp CCTTGTTTAAAGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAACATAGTAGTAGCCCATaGTGGAGAAGATCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: PCLKMYWKTSPGTSVIGEHSSSP*WRRSGR
Trigger: TCTGCCTGATCTTCTCCATCATGGGCTACTACTATG...TTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTTTAAACAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR TCA 90 bp TGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATTACTCTGTAAAAGAATaGCTGGCTCTTCAGGATTTC +
Preference number: 4 (lower is better)
Translates to: CTGKPVLELLSLEKGGGDYSVKE*LALQDF
Trigger: GAAATCCTGAAGAGCCAGTCATTCTTTTACAGAGTA...ATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR TCA 90 bp AGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGATGCAGTTTCAGTCAATaGCAGACCAAATATGTGATG +
Preference number: 4 (lower is better)
Translates to: RCTGKPVLELLSLEKGGGCSFSQ*QTKYVM
Trigger: CATCACATATTTGGTCTGTCATTGACTGAAACTGCA...TCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR GCA 90 bp TTAAAGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGGCATATTGTGGTAGCTaGCACGCAATGGACATTTTG +
Preference number: 4 (lower is better)
Translates to: LKMYWKTSPGTSVIGERWAYCGS*HAMDIL
Trigger: CAAAATGTCCATTGCGTGGCAGCTACCACAATATGC...CCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR GCA 90 bp AGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGATCAGCTCTGATATGCTaGTATCTCTCTTGTCTAATC +
Preference number: 4 (lower is better)
Translates to: RCTGKPVLELLSLEKGGGSALIC*YLSCLI
Trigger: GATTAGACAAGAGAGATAGCAGCATATCAGAGCTGA...TCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR GCA 90 bp ACTGATGGACGGGCAGACATAGAGTCTCTGGGGCCTTGTTTAAAGATGTACTGGCCATTGTGTTACAATTaGCTACAGCATTTAATACAG +
Preference number: 4 (lower is better)
Translates to: TDGRADIESLGPCLKMYWPLCYN*LQHLIQ
Trigger: CTGTATTAAATGCTGTAGGCAATTGTAACACAATGG...CCAGTACATCTTTAAACAAGGCCCCAGAGACTCTATGTCTGCCCGTCCATCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR CCA 90 bp AAGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGGGACATTTTGTTGGCTaGAATGTCTTCAATCTTCCA +
Preference number: 4 (lower is better)
Translates to: KMYWKTSPGTSVIGERWRGHFVG*NVFNLP
Trigger: TGGAAGATTGAAGACATTCCAGCCAACAAAATGTCC...CCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp GATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGCAATGGACATTTTGTTaGCTGGAATGTCTTCAATCT +
Preference number: 4 (lower is better)
Translates to: DVLENQSWNFCHWRKVEEQWTFC*LECLQS
Trigger: AGATTGAAGACATTCCAGCCAACAAAATGTCCATTG...CTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp GATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGTGTTTAAAGATGTACTaGAAAACCAGTCCTGGAACT +
Preference number: 4 (lower is better)
Translates to: DVLENQSWNFCHWRKVEECLKMY*KTSPGT
Trigger: AGTTCCAGGACTGGTTTTCCAGTACATCTTTAAACA...CTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp AAGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGGCCATCAGTCCTAAATaGCAGTTACCTATAAAGGAA +
Preference number: 4 (lower is better)
Translates to: KMYWKTSPGTSVIGERWRAISPK*QLPIKE
Trigger: TTCCTTTATAGGTAACTGCCATTTAGGACTGATGGC...CCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR TCA 90 bp AGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGACAAACCAGATACATTTaGAAACTTGAGCCACTATGT +
Preference number: 4 (lower is better)
Translates to: RCTGKPVLELLSLEKGGGQTRYI*KLEPLC
Trigger: ACATAGTGGCTCAAGTTTTCAAATGTATCTGGTTTG...TCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR TCA 90 bp TTTAATGAGTTCACTGATGGACGGGCAGACATAGAGTCTCTGGGGCCTTGTTTACAAACCAGATACATTTaGAAACTTGAGCCACTATGT +
Preference number: 4 (lower is better)
Translates to: FNEFTDGRADIESLGPCLQTRYI*KLEPLC
Trigger: ACATAGTGGCTCAAGTTTTCAAATGTATCTGGTTTG...TAAACAAGGCCCCAGAGACTCTATGTCTGCCCGTCCATCAGTGAACTCATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR GCA 90 bp CCTTGTTTAAAGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAATGTTCTACAGTGCACTaGAGGGTATTCTCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: PCLKMYWKTSPGTSVIGECSTVH*RVFSSL
Trigger: CAAAGAGGAGAATACCCTGCAGTGCACTGTAGAACA...TTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTTTAAACAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR GCA 90 bp AAGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGATCTTGTGTCTTTACTaGAGGATATCTCAGAGTCTT +
Preference number: 4 (lower is better)
Translates to: KMYWKTSPGTSVIGERWRILCLY*RISQSL
Trigger: AAGACTCTGAGATATCCTGCAGTAAAGACACAAGAT...CCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR GCA 90 bp GTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATCTCCAAACCAATGTTCTaGAGCGTACATGTTAATTTA +
Preference number: 4 (lower is better)
Translates to: VLENQSWNFCHWRKVEEISKPMF*SVHVNL
Trigger: TAAATTAACATGTACGCTGCAGAACATTGGTTTGGA...GATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR CCA 90 bp CCTTGTTTAAAGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGCTGCTGAAGGCATaGTATATAGATGTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: PCLKMYWKTSPGTSVIGERLLKA*YIDVEV
Trigger: TACCTCCACATCTATATACCATGCCTTCAGCAGCCT...TTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTTTAAACAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp CAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCAGACATAGAGGTTTCCTTCAGGGGGTaGTTTATTGTATATTTTGCT +
Preference number: 4 (lower is better)
Translates to: QQHCTSFNEFTDGRADIEVSFRG*FIVYFA
Trigger: AGCAAAATATACAATAAACCACCCCCTGAAGGAAAC...CTCTATGTCTGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp AAGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGGTTTCCTTCAGGGGGTaGTTTATTGTATATTTTGCT +
Preference number: 4 (lower is better)
Translates to: KMYWKTSPGTSVIGERWRVSFRG*FIVYFA
Trigger: AGCAAAATATACAATAAACCACCCCCTGAAGGAAAC...CCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp GATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGCAGTTTGGAATAGTGTaGTGTTTTCTGAAAGGATTT +
Preference number: 4 (lower is better)
Translates to: DVLENQSWNFCHWRKVEEQFGIV*CFLKGF
Trigger: AAATCCTTTCAGAAAACACCACACTATTCCAAACTG...CTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp GTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATCCAGTTTGGAATAGTGTaGTGTTTTCTGAAAGGATTT +
Preference number: 4 (lower is better)
Translates to: VLENQSWNFCHWRKVEEIQFGIV*CFLKGF
Trigger: AAATCCTTTCAGAAAACACCACACTATTCCAAACTG...GATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp AAGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGCAATGGACATTTTGTTaGCTGGAATGTCTTCAATCT +
Preference number: 4 (lower is better)
Translates to: KMYWKTSPGTSVIGERWRQWTFC*LECLQS
Trigger: AGATTGAAGACATTCCAGCCAACAAAATGTCCATTG...CCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp CAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCAGACATAGAGCCAGTCAGACTACTTTaGAATGTTATATTTGACTCC +
Preference number: 4 (lower is better)
Translates to: QQHCTSFNEFTDGRADIEPVRLL*NVIFDS
Trigger: GGAGTCAAATATAACATTCCAAAGTAGTCTGACTGG...CTCTATGTCTGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR TCA 90 bp CCTTGTTTAAAGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAATTCATTCACCACAATaGAGGCAATGCTCAGTGGAT +
Preference number: 4 (lower is better)
Translates to: PCLKMYWKTSPGTSVIGEIHSPQ*RQCSVD
Trigger: ATCCACTGAGCATTGCCTTCATTGTGGTGAATGAAT...TTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTTTAAACAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR GCA 90 bp TTTAATGAGTTCACTGATGGACGGGCAGACATAGAGTCTCTGGGGCCTTGTTTATATTTTGCTTCCCATTaGAAACACAACAAGTGCAAT +
Preference number: 4 (lower is better)
Translates to: FNEFTDGRADIESLGPCLYFASH*KHNKCN
Trigger: ATTGCACTTGTTGTGTTTGCAATGGGAAGCAAAATA...TAAACAAGGCCCCAGAGACTCTATGTCTGCCCGTCCATCAGTGAACTCATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR GCA 90 bp CCTTGTTTAAAGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAACAGCTCCAGCAACACTaGACAAGTTTTAATGAGTTC +
Preference number: 4 (lower is better)
Translates to: PCLKMYWKTSPGTSVIGEQLQQH*TSFNEF
Trigger: GAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTG...TTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTTTAAACAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp CCTTGTTTAAAGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAAAGAGCCCAGAACATaGGCAATGGGATATAAAGGA +
Preference number: 4 (lower is better)
Translates to: PCLKMYWKTSPGTSVIGEKEPRT*AMGYKG
Trigger: TCCTTTATATCCCATTGCCCATGTTCTGGGCTCTTT...TTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTTTAAACAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CCA 90 bp CCTTGTTTAAAGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAACGGTTGTCATCCCATTaGTTGTTCTGCTTTCTGTAT +
Preference number: 4 (lower is better)
Translates to: PCLKMYWKTSPGTSVIGERLSSH*LFCFLY
Trigger: ATACAGAAAGCAGAACAACCAATGGGATGACAACCG...TTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTTTAAACAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR TCA 90 bp CCTTGTTTAAAGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAATACTCAGGGAGATGTTaGCATCTTTATGCAAAGTGT +
Preference number: 4 (lower is better)
Translates to: PCLKMYWKTSPGTSVIGEYSGRC*HLYAKC
Trigger: ACACTTTGCATAAAGATGTCAACATCTCCCTGAGTA...TTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTTTAAACAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR TCA 90 bp TCTTCAGGATTTCTACAACTTACACCTGTTCCTGTTCTCCAGAACAATGTTTACAGTCTTCACCAACATTaGGAGAGGTATCTGTACTCA +
Preference number: 4 (lower is better)
Translates to: SSGFLQLTPVPVLQNNVYSLHQH*ERYLYS
Trigger: TGAGTACAGATACCTCTCTCAATGTTGGTGAAGACT...GTAAACATTGTTCTGGAGAACAGGAACAGGTGTAAGTTGTAGAAATCCTGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR GCA 90 bp CCTTGTTTAAAGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAATATTTTGCTTCCCATTaGAAACACAACAAGTGCAAT +
Preference number: 4 (lower is better)
Translates to: PCLKMYWKTSPGTSVIGEYFASH*KHNKCN
Trigger: ATTGCACTTGTTGTGTTTGCAATGGGAAGCAAAATA...TTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTTTAAACAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CAA 90 bp CCAGGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCTGCCACACAGGGTTaGATGCCTCCTGTCCCCAAA +
Preference number: 5 (lower is better)
Translates to: PGQLQQHCTSFNEFTDGRAATQG*MPPVPK
Trigger: TTTGGGGACAGGAGGCATCAAACCCTGTGTGGCAGC...CCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CAA 90 bp CAGGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGGCCAGTGCTGTCGCTTaGGAATGTCTCCAGAACGGT +
Preference number: 5 (lower is better)
Translates to: QASSSNTAQVLMSSLMDGASAVA*ECLQNG
Trigger: ACCGTTCTGGAGACATTCCAAAGCGACAGCACTGGC...CCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CAA 90 bp GCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCAGAAGGCACCCAAGGACTaGATCACATGGCCAAGCACA +
Preference number: 5 (lower is better)
Translates to: ASSSNTAQVLMSSLMDGQKAPKD*ITWPST
Trigger: TGTGCTTGGCCATGTGATCAAGTCCTTGGGTGCCTT...CTGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR CAA 90 bp CAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCAGACATAGAGGCTGCCACACAGGGTTaGATGCCTCCTGTCCCCAAA +
Preference number: 5 (lower is better)
Translates to: QQHCTSFNEFTDGRADIEAATQG*MPPVPK
Trigger: TTTGGGGACAGGAGGCATCAAACCCTGTGTGGCAGC...CTCTATGTCTGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS TCA 90 bp GACCCCGCATATCCTCTGTCTTTACAGGAACATAGTAGTAGCCCATaGTGGAGAAGATCAGGCAGATCACCAGCAGGAGGCAGGAAAACA +
Preference number: 5 (lower is better)
Translates to: DPAYPLSLQEHSSSP*WRRSGRSPAGGRKT
Trigger: TGTTTTCCTGCCTCCTGCTGGTGATCTGCCTGATCTTCTCCATCATGGGCTACTACTATGTTCCTGTAAAGACAGAGGATATGCGGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295605.6
ENST00000469422.1
ENST00000489711.6
CDS-3UTR CAA 90 bp AAGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGGCCAGTGCTGTCGCTTaGGAATGTCTCCAGAACGGT +
Preference number: 5 (lower is better)
Translates to: KMYWKTSPGTSVIGERWRASAVA*ECLQNG
Trigger: ACCGTTCTGGAGACATTCCAAAGCGACAGCACTGGC...CCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CAA 90 bp CAGGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCTGGAACTTCTGTCATaGGAGAAAGGTGGAGGAGAT +
Preference number: 5 (lower is better)
Translates to: QASSSNTAQVLMSSLMDGLELLS*EKGGGD
Trigger: ATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAG...CCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CAA 90 bp AGAGCTGACAAGCCAGGCCCTGGCTGGACCAGATCACATCATACATACCAATTCCTGGAACTTCTGTCATaGGAGAAAGGTGGAGGAGAT +
Preference number: 5 (lower is better)
Translates to: RADKPGPGWTRSHHTYQFLELLS*EKGGGD
Trigger: ATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAG...GAATTGGTATGTATGATGTGATCTGGTCCAGCCAGGGCCTGGCTTGTCAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR CAA 90 bp AGAGCTGACAAGCCAGGCCCTGGCTGGACCAGATCACATCATACATACCAATTCGCTGGATCAGCAAGGTaGACAAGACAAGGTTGCAAA +
Preference number: 5 (lower is better)
Translates to: RADKPGPGWTRSHHTYQFAGSAR*TRQGCK
Trigger: TTTGCAACCTTGTCTTGTCAACCTTGCTGATCCAGC...GAATTGGTATGTATGATGTGATCTGGTCCAGCCAGGGCCTGGCTTGTCAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS GCA 90 bp GAGAACATGACCTCCCCAGCTGTAACCAGGGCATATTGTGGTAGCTaGCACGCAATGGACATTTTGTTGGCTGGAATGTCTTCAATCTTC +
Preference number: 5 (lower is better)
Translates to: ENMTSPAVTRAYCGS*HAMDILLAGMSSIF
Trigger: GAAGATTGAAGACATTCCAGCCAACAAAATGTCCATTGCGTGGCAGCTACCACAATATGCCCTGGTTACAGCTGGGGAGGTCATGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295605.6
ENST00000469422.1
ENST00000489711.6
CDS-3UTR CAA 90 bp GGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCAGTCTTCTCCAAAACATaGCACATCTCCTCTCAGCAT +
Preference number: 5 (lower is better)
Translates to: GQLQQHCTSFNEFTDGRAVFSKT*HISSQH
Trigger: ATGCTGAGAGGAGATGTGCAATGTTTTGGAGAAGAC...TGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CAA 90 bp CAGGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGGTCTTCTCCAAAACATaGCACATCTCCTCTCAGCAT +
Preference number: 5 (lower is better)
Translates to: QASSSNTAQVLMSSLMDGVFSKT*HISSQH
Trigger: ATGCTGAGAGGAGATGTGCAATGTTTTGGAGAAGAC...CCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CAA 90 bp GGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCAACGGTTGTCATCCCATaGGTTGTTCTGCTTTCTGTA +
Preference number: 5 (lower is better)
Translates to: GQLQQHCTSFNEFTDGRATVVIP*VVLLSV
Trigger: TACAGAAAGCAGAACAACCAATGGGATGACAACCGT...TGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CAA 90 bp CCAGGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGCACGCAATGGACATTTaGTTGGCTGGAATGTCTTCA +
Preference number: 5 (lower is better)
Translates to: PGQLQQHCTSFNEFTDGRHAMDI*LAGMSS
Trigger: TGAAGACATTCCAGCCAACAAAATGTCCATTGCGTG...CCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CAA 90 bp AAGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGCTTGTCCTCCCAGTATaGGTAAGGCACCCAAGGACT +
Preference number: 5 (lower is better)
Translates to: KMYWKTSPGTSVIGERWRLVLPV*VRHPRT
Trigger: AGTCCTTGGGTGCCTTACCAATACTGGGAGGACAAG...CCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS GCA 90 bp ATAATGAGCTGCTTTGGATATTTCTCAGCCGCCCAGTCTAGCCAGTaGTGTCGCTTTGGAATGTCTCCAGAACGGTTCTTGAAACGATTG +
Preference number: 5 (lower is better)
Translates to: IMSCFGYFSAAQSSQ*CRFGMSPERFLKRL
Trigger: CAATCGTTTCAAGAACCGTTCTGGAGACATTCCAAAGCGACAGCACTGGCTAGACTGGGCGGCTGAGAAATATCCAAAGCAGCTCATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295605.6
ENST00000489711.6
ENST00000489886.1
CDS-3UTR CAA 90 bp CAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCAGACATAGAGAGTTGGAGCCACAGATaGTCGGAGATGGCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: QQHCTSFNEFTDGRADIESWSHR*SEMASL
Trigger: CAAAGAAGCCATCTCCGACAATCTGTGGCTCCAACT...CTCTATGTCTGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CAA 90 bp GCCAGGCCCTGGCTGGACCAGATCACATCATACATACCAATTCTTGAGGCCCCTGATACATTTGAAAACTaGAGCCACTATGTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: ARPWLDQITSYIPILEAPDTFEN*SHYVSF
Trigger: GAAGGAAACATAGTGGCTCAAGTTTTCAAATGTATC...AGGGGCCTCAAGAATTGGTATGTATGATGTGATCTGGTCCAGCCAGGGCCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR CAA 90 bp GGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCATTGTCATCCCATTGGTaGTTCTGCTTTCTGTATCCT +
Preference number: 5 (lower is better)
Translates to: GQLQQHCTSFNEFTDGRALSSHW*FCFLYP
Trigger: AGGATACAGAAAGCAGAACAACCAATGGGATGACAA...TGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CAA 90 bp CAGGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGGTACTCAGGGAGATGTaGACATCTTTATGCAAAGTG +
Preference number: 5 (lower is better)
Translates to: QASSSNTAQVLMSSLMDGVLREM*TSLCKV
Trigger: CACTTTGCATAAAGATGTCAACATCTCCCTGAGTAC...CCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CAA 90 bp GGCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCAAGGGTATTCTCCTCTTaGCACAGTTCTATAAGCAGA +
Preference number: 5 (lower is better)
Translates to: GQLQQHCTSFNEFTDGRARVFSS*HSSISR
Trigger: TCTGCTTATAGAACTGTGCAAAGAGGAGAATACCCT...TGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CAA 90 bp AGAGCTGACAAGCCAGGCCCTGGCTGGACCAGATCACATCATACATACCAATTCGCAATGGACATTTTGTaGGCTGGAATGTCTTCAATC +
Preference number: 5 (lower is better)
Translates to: RADKPGPGWTRSHHTYQFAMDIL*AGMSSI
Trigger: GATTGAAGACATTCCAGCCAACAAAATGTCCATTGC...GAATTGGTATGTATGATGTGATCTGGTCCAGCCAGGGCCTGGCTTGTCAGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR CAA 90 bp GTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATCTATTTTCATGGTCATTaGGAGACACCAGGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: VLENQSWNFCHWRKVEEIYFHGH*ETPGQL
Trigger: GAGCTGGCCTGGTGTCTCCAAATGACCATGAAAATA...GATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR CAA 90 bp TGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATATCTGGAAAAACTGGTaGGTCTGGCTGCCGCTCTTA +
Preference number: 5 (lower is better)
Translates to: CTGKPVLELLSLEKGGGDIWKNW*VWLPLL
Trigger: TAAGAGCGGCAGCCAGACCAACCAGTTTTTCCAGAT...ATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS GCA 90 bp ATAGATGATTGTCTTGAATTTTCCCAACCACGAGTCAGCAATGGCTaGTCCCAGGATGGGAGTAAAATAACAGAGGCTGCTGAAGGCATG +
Preference number: 5 (lower is better)
Translates to: IDDCLEFSQPRVSNG*SQDGSKITEAAEGM
Trigger: CATGCCTTCAGCAGCCTCTGTTATTTTACTCCCATCCTGGGAGCAGCCATTGCTGACTCGTGGTTGGGAAAATTCAAGACAATCATCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469013.1
ENST00000489711.6
CDS-3UTR CAA 90 bp GCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCAGCGGTTCTTGAAACGATaGGAAATAGCAAACCAGATA +
Preference number: 5 (lower is better)
Translates to: ASSSNTAQVLMSSLMDGQRFLKR*EIANQI
Trigger: TATCTGGTTTGCTATTTCCAATCGTTTCAAGAACCG...CTGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CAA 90 bp GCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCAGATGCTGCTATCTCTCTaGTCTAATCCAGTAGAAGAA +
Preference number: 5 (lower is better)
Translates to: ASSSNTAQVLMSSLMDGQMLLSL*SNPVEE
Trigger: TTCTTCTACTGGATTAGACAAGAGAGATAGCAGCAT...CTGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS TCA 90 bp TCATTCCATAATAGGAAAAGCGCTCGCAGAATTCATTCACCACAATaGAGGCAATGCTCAGTGGATAGTTGGAGCCACAGATTGTCGGAG +
Preference number: 5 (lower is better)
Translates to: SFHNRKSARRIHSPQ*RQCSVDSWSHRLSE
Trigger: CTCCGACAATCTGTGGCTCCAACTATCCACTGAGCATTGCCTTCATTGTGGTGAATGAATTCTGCGAGCGCTTTTCCTATTATGGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CAA 90 bp ACTGATGGACGGGCAGACATAGAGTCTCTGGGGCCTTGTTTAAAGATGTACTGGATCAATGATAGGACTTaGAATTTTCCCAACCACGAG +
Preference number: 5 (lower is better)
Translates to: TDGRADIESLGPCLKMYWINDRT*NFPNHE
Trigger: CTCGTGGTTGGGAAAATTCAAAGTCCTATCATTGAT...CCAGTACATCTTTAAACAAGGCCCCAGAGACTCTATGTCTGCCCGTCCATCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295605.6
CDS-3UTR CAA 90 bp GATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGTCTCCAGAACGGTTCTaGAAACGATTGGAAATAGCA +
Preference number: 5 (lower is better)
Translates to: DVLENQSWNFCHWRKVEESPERF*KRLEIA
Trigger: TGCTATTTCCAATCGTTTCAAGAACCGTTCTGGAGA...CTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CAA 90 bp GCCAGCTCCAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCAGTCTATCAACAGAGAATaGTTTTCATTTCCCACCACT +
Preference number: 5 (lower is better)
Translates to: ASSSNTAQVLMSSLMDGQSINRE*FSFPTT
Trigger: AGTGGTGGGAAATGAAAACAATTCTCTGTTGATAGA...CTGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTGGAGCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CAA 90 bp AGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGACACGCAATGGACATTTaGTTGGCTGGAATGTCTTCA +
Preference number: 5 (lower is better)
Translates to: RCTGKPVLELLSLEKGGGHAMDI*LAGMSS
Trigger: TGAAGACATTCCAGCCAACAAAATGTCCATTGCGTG...TCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CAA 90 bp AGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGATTCTTGGTCTCTAGTTaGATCATGTTCCCCTGGATG +
Preference number: 5 (lower is better)
Translates to: RCTGKPVLELLSLEKGGGFLVSS*IMFPWM
Trigger: CATCCAGGGGAACATGATCAAACTAGAGACCAAGAA...TCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CAA 90 bp CAGCAACACTGCACAAGTTTTAATGAGTTCACTGATGGACGGGCAGACATAGAGTTCTTGGTCTCTAGTTaGATCATGTTCCCCTGGATG +
Preference number: 5 (lower is better)
Translates to: QQHCTSFNEFTDGRADIEFLVSS*IMFPWM
Trigger: CATCCAGGGGAACATGATCAAACTAGAGACCAAGAA...CTCTATGTCTGCCCGTCCATCAGTGAACTCATTAAAACTTGTGCAGTGTTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CAA 90 bp AAGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGAGTCTCTGGGGCCTaGTTTAAAGATGTACTGGAA +
Preference number: 5 (lower is better)
Translates to: KMYWKTSPGTSVIGERWRRVSGA*FKDVLE
Trigger: TTCCAGTACATCTTTAAACAAGGCCCCAGAGACTCT...CCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CAA 90 bp TTTAATGAGTTCACTGATGGACGGGCAGACATAGAGTCTCTGGGGCCTTGTTTAAGAGTCTCTGGGGCCTaGTTTAAAGATGTACTGGAA +
Preference number: 5 (lower is better)
Translates to: FNEFTDGRADIESLGPCLRVSGA*FKDVLE
Trigger: TTCCAGTACATCTTTAAACAAGGCCCCAGAGACTCT...TAAACAAGGCCCCAGAGACTCTATGTCTGCCCGTCCATCAGTGAACTCATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS TCA 90 bp AAATGTAGAAATCAAGCTCCCTGCATTGATGGACAGGTAGAAGACTaGGAAGTATCTAGTCCGTTCCTCTGCCTTTCAAACTCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: KCRNQAPCIDGQVED*EVSSPFLCLSNSRA
Trigger: TGCTCTGGAGTTTGAAAGGCAGAGGAACGGACTAGATACTTCTCAGTCTTCTACCTGTCCATCAATGCAGGGAGCTTGATTTCTACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489886.1
CDS GCA 90 bp AACAAGTGCAATTACCATGAGCAGTCCTGGAACTCCAAAAGCCAATaGATAGCAGTCTTCTCCAAAACATTGCACATCTCCTCTCAGCAT +
Preference number: 5 (lower is better)
Translates to: NKCNYHEQSWNSKSQ*IAVFSKTLHISSQH
Trigger: ATGCTGAGAGGAGATGTGCAATGTTTTGGAGAAGACTGCTATGCATTGGCTTTTGGAGTTCCAGGACTGCTCATGGTAATTGCACTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295605.6
ENST00000489711.6
ENST00000489886.1
CDS CCA 90 bp GCTTCCCATTGCAAACACAACAAGTGCAATTACCATGAGCAGTCCTaGAACTCCAAAAGCCAATGCATAGCAGTCTTCTCCAAAACATTG +
Preference number: 5 (lower is better)
Translates to: ASHCKHNKCNYHEQS*NSKSQCIAVFSKTL
Trigger: CAATGTTTTGGAGAAGACTGCTATGCATTGGCTTTTGGAGTTCCAGGACTGCTCATGGTAATTGCACTTGTTGTGTTTGCAATGGGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295605.6
ENST00000489711.6
ENST00000489886.1
CDS-3UTR CAA 90 bp CCTTGTTTAAAGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGTTGGAGCCACAGATaGTCGGAGATGGCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: PCLKMYWKTSPGTSVIGESWSHR*SEMASL
Trigger: CAAAGAAGCCATCTCCGACAATCTGTGGCTCCAACT...TTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTTTAAACAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CAA 90 bp TTTAATGAGTTCACTGATGGACGGGCAGACATAGAGTCTCTGGGGCCTTGTTTATCTCCAGAACGGTTCTaGAAACGATTGGAAATAGCA +
Preference number: 5 (lower is better)
Translates to: FNEFTDGRADIESLGPCLSPERF*KRLEIA
Trigger: TGCTATTTCCAATCGTTTCAAGAACCGTTCTGGAGA...TAAACAAGGCCCCAGAGACTCTATGTCTGCCCGTCCATCAGTGAACTCATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CAA 90 bp TGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATTTGTCATCCCATTGGTaGTTCTGCTTTCTGTATCCT +
Preference number: 5 (lower is better)
Translates to: CTGKPVLELLSLEKGGGDLSSHW*FCFLYP
Trigger: AGGATACAGAAAGCAGAACAACCAATGGGATGACAA...ATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CAA 90 bp TGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATGTACTCAGGGAGATGTaGACATCTTTATGCAAAGTG +
Preference number: 5 (lower is better)
Translates to: CTGKPVLELLSLEKGGGDVLREM*TSLCKV
Trigger: CACTTTGCATAAAGATGTCAACATCTCCCTGAGTAC...ATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CAA 90 bp TTTAATGAGTTCACTGATGGACGGGCAGACATAGAGTCTCTGGGGCCTTGTTTAAGGGTATTCTCCTCTTaGCACAGTTCTATAAGCAGA +
Preference number: 5 (lower is better)
Translates to: FNEFTDGRADIESLGPCLRVFSS*HSSISR
Trigger: TCTGCTTATAGAACTGTGCAAAGAGGAGAATACCCT...TAAACAAGGCCCCAGAGACTCTATGTCTGCCCGTCCATCAGTGAACTCATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CAA 90 bp TTTAATGAGTTCACTGATGGACGGGCAGACATAGAGTCTCTGGGGCCTTGTTTAGCAATGGACATTTTGTaGGCTGGAATGTCTTCAATC +
Preference number: 5 (lower is better)
Translates to: FNEFTDGRADIESLGPCLAMDIL*AGMSSI
Trigger: GATTGAAGACATTCCAGCCAACAAAATGTCCATTGC...TAAACAAGGCCCCAGAGACTCTATGTCTGCCCGTCCATCAGTGAACTCATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CAA 90 bp AAGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGGGAGTCATCAGAGTTTaGTCTTCTTGGTCTCTAGTT +
Preference number: 5 (lower is better)
Translates to: KMYWKTSPGTSVIGERWRGVIRV*SSWSLV
Trigger: AACTAGAGACCAAGAAGACAAAACTCTGATGACTCC...CCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CAA 90 bp GATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATGCTGCTATCTCTCTaGTCTAATCCAGTAGAAGAA +
Preference number: 5 (lower is better)
Translates to: DVLENQSWNFCHWRKVEEMLLSL*SNPVEE
Trigger: TTCTTCTACTGGATTAGACAAGAGAGATAGCAGCAT...CTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CAA 90 bp GTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATCCTTTACCTTGAATACTaGATGATTAGGGAAGAGCCA +
Preference number: 5 (lower is better)
Translates to: VLENQSWNFCHWRKVEEILYLEY*MIREEP
Trigger: TGGCTCTTCCCTAATCATCAAGTATTCAAGGTAAAG...GATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS GCA 90 bp CTGCTGAAGGCATGGTATATAGATGTGGAGGTATCTTCATTCCAGTaGAGGAAATACAGGAAATACAGGATCAGCACAGCTTTCATTCCA +
Preference number: 5 (lower is better)
Translates to: LLKAWYIDVEVSSFQ*RKYRKYRISTAFIP
Trigger: TGGAATGAAAGCTGTGCTGATCCTGTATTTCCTGTATTTCCTGCACTGGAATGAAGATACCTCCACATCTATATACCATGCCTTCAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295605.6
ENST00000469013.1
ENST00000489711.6
CDS-3UTR CAA 90 bp TTAAAGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGACGGTTGTCATCCCATaGGTTGTTCTGCTTTCTGTA +
Preference number: 5 (lower is better)
Translates to: LKMYWKTSPGTSVIGERWTVVIP*VVLLSV
Trigger: TACAGAAAGCAGAACAACCAATGGGATGACAACCGT...CCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CAA 90 bp TTTAATGAGTTCACTGATGGACGGGCAGACATAGAGTCTCTGGGGCCTTGTTTACAGAGTTTTGTCTTCTaGGTCTCTAGTTTGATCATG +
Preference number: 5 (lower is better)
Translates to: FNEFTDGRADIESLGPCLQSFVF*VSSLIM
Trigger: CATGATCAAACTAGAGACCAAGAAGACAAAACTCTG...TAAACAAGGCCCCAGAGACTCTATGTCTGCCCGTCCATCAGTGAACTCATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CAA 90 bp TGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATATATTTTGCTTCCCATaGCAAACACAACAAGTGCAA +
Preference number: 5 (lower is better)
Translates to: CTGKPVLELLSLEKGGGDIFCFP*QTQQVQ
Trigger: TTGCACTTGTTGTGTTTGCAATGGGAAGCAAAATAT...ATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CAA 90 bp AGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATACATTTGAAAACTaGAGCCACTATGTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: RCTGKPVLELLSLEKGGGDTFEN*SHYVSF
Trigger: GAAGGAAACATAGTGGCTCAAGTTTTCAAATGTATC...TCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CAA 90 bp TGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAAAGGTGGAGGAGATTCTATCAACAGAGAATaGTTTTCATTTCCCACCACT +
Preference number: 5 (lower is better)
Translates to: CTGKPVLELLSLEKGGGDSINRE*FSFPTT
Trigger: AGTGGTGGGAAATGAAAACAATTCTCTGTTGATAGA...ATCTCCTCCACCTTTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS TCA 90 bp AAATGTAGAAATCAAGCTCCCTGCATTGATGGACAGGTAGAAGACTaGGAAGTATCTAGTCCGTTCCTCTGCATGTTTTTCTTCAAACTG +
Preference number: 5 (lower is better)
Translates to: KCRNQAPCIDGQVED*EVSSPFLCMFFFKL
Trigger: CAGTTTGAAGAAAAACATGCAGAGGAACGGACTAGATACTTCTCAGTCTTCTACCTGTCCATCAATGCAGGGAGCTTGATTTCTACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295605.6
ENST00000469013.1
ENST00000489711.6
CDS-3UTR CAA 90 bp CCTTGTTTAAAGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAACTACTCCCACAAATTTaGATAGGAACCTCACATAGG +
Preference number: 5 (lower is better)
Translates to: PCLKMYWKTSPGTSVIGELLPQI*IGTSHR
Trigger: CCTATGTGAGGTTCCTATCAAAATTTGTGGGAGTAG...TTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTTTAAACAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR CAA 90 bp CCTTGTTTAAAGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAACAGAGTTTTGTCTTCTaGGTCTCTAGTTTGATCATG +
Preference number: 5 (lower is better)
Translates to: PCLKMYWKTSPGTSVIGEQSFVF*VSSLIM
Trigger: CATGATCAAACTAGAGACCAAGAAGACAAAACTCTG...TTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTTTAAACAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS-3UTR CAA 90 bp TCTTCAGGATTTCTACAACTTACACCTGTTCCTGTTCTCCAGAACAATGTTTACGGAGTCATCAGAGTTTaGTCTTCTTGGTCTCTAGTT +
Preference number: 5 (lower is better)
Translates to: SSGFLQLTPVPVLQNNVYGVIRV*SSWSLV
Trigger: AACTAGAGACCAAGAAGACAAAACTCTGATGACTCC...GTAAACATTGTTCTGGAGAACAGGAACAGGTGTAAGTTGTAGAAATCCTGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS-3UTR CAA 90 bp CCTTGTTTAAAGATGTACTGGAAAACCAGTCCTGGAACTTCTGTCATTGGAGAATGTTATTCTGCAATTTaGCCTCTAAATCAGCACCTC +
Preference number: 5 (lower is better)
Translates to: PCLKMYWKTSPGTSVIGECYSAI*PLNQHL
Trigger: GAGGTGCTGATTTAGAGGCAAAATTGCAGAATAACA...TTCTCCAATGACAGAAGTTCCAGGACTGGTTTTCCAGTACATCTTTAAACAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489711.6
CDS GCA 72 bp TGCTTTGGATATTTCTCAGCCGCCCAGTCTAGCCAGTaGTGTCGCTTTGGAATGTCTCCAGAACGGTTCTTG +
Preference number: 6 (lower is better)
Translates to: CFGYFSAAQSSQ*CRFGMSPERFL
Trigger: CAAGAACCGTTCTGGAGACATTCCAAAGCGACAGCACTGGCTAGACTGGGCGGCTGAGAAATATCCAAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295605.6
ENST00000489711.6
ENST00000489886.1
CDS GCA 72 bp ACCTCCCCAGCTGTAACCAGGGCATATTGTGGTAGCTaGCACGCAATGGACATTTTGTTGGCTGGAATGTCT +
Preference number: 6 (lower is better)
Translates to: TSPAVTRAYCGS*HAMDILLAGMS
Trigger: AGACATTCCAGCCAACAAAATGTCCATTGCGTGGCAGCTACCACAATATGCCCTGGTTACAGCTGGGGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295605.6
ENST00000469422.1
ENST00000489711.6
CDS CCA 72 bp ATAGTTGGAGCCACAGATTGTCGGAGATGGCTTCTTTaGAGGGCTAGGTGGTCGAGGTGGTACCTCTTCAAT +
Preference number: 6 (lower is better)
Translates to: IVGATDCRRWLL*RARWSRWYLFN
Trigger: ATTGAAGAGGTACCACCTCGACCACCTAGCCCTCCAAAGAAGCCATCTCCGACAATCTGTGGCTCCAACTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295605.6
ENST00000489711.6
CDS TCA 72 bp CTTGTCCTCCCAGTATTGGTAAGGCACCCAAGGACTTaGTCACATGGCCAAGCACATACACCAAGGAGAGAT +
Preference number: 6 (lower is better)
Translates to: LVLPVLVRHPRT*SHGQAHTPRRD
Trigger: ATCTCTCCTTGGTGTATGTGCTTGGCCATGTGATCAAGTCCTTGGGTGCCTTACCAATACTGGGAGGACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469013.1
ENST00000489711.6
CDS GCA 72 bp GATCATGTTCCCCTGGATGTGAGGAATGTGCTTATCTaGTGGACCCCGCATATCCTCTGTCTTTACAGGAAC +
Preference number: 6 (lower is better)
Translates to: DHVPLDVRNVLI*WTPHILCLYRN
Trigger: GTTCCTGTAAAGACAGAGGATATGCGGGGTCCAGCAGATAAGCACATTCCTCACATCCAGGGGAACATGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295605.6
ENST00000469422.1
ENST00000489711.6
CDS CAA 72 bp ACTTGTCCTCCCAGTATTGGTAAGGCACCCAAGGACTaGATCACATGGCCAAGCACATACACCAAGGAGAGA +
Preference number: 6 (lower is better)
Translates to: TCPPSIGKAPKD*ITWPSTYTKER
Trigger: TCTCTCCTTGGTGTATGTGCTTGGCCATGTGATCAAGTCCTTGGGTGCCTTACCAATACTGGGAGGACAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469013.1
ENST00000489711.6
CDS GCA 72 bp GACTTTGAATTTTCCCAACCACGAGTCAGCAATGGCTaGTCCCAGGATGGGAGTAAAATAACAGAGGCTGCT +
Preference number: 6 (lower is better)
Translates to: DFEFSQPRVSNG*SQDGSKITEAA
Trigger: AGCAGCCTCTGTTATTTTACTCCCATCCTGGGAGCAGCCATTGCTGACTCGTGGTTGGGAAAATTCAAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295605.6
CDS GCA 72 bp TGTCTTGAATTTTCCCAACCACGAGTCAGCAATGGCTaGTCCCAGGATGGGAGTAAAATAACAGAGGCTGCT +
Preference number: 6 (lower is better)
Translates to: CLEFSQPRVSNG*SQDGSKITEAA
Trigger: AGCAGCCTCTGTTATTTTACTCCCATCCTGGGAGCAGCCATTGCTGACTCGTGGTTGGGAAAATTCAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469013.1
ENST00000489711.6
CDS CCA 72 bp CATGTTCCCCTGGATGTGAGGAATGTGCTTATCTGCTaGACCCCGCATATCCTCTGTCTTTACAGGAACATA +
Preference number: 6 (lower is better)
Translates to: HVPLDVRNVLIC*TPHILCLYRNI
Trigger: TATGTTCCTGTAAAGACAGAGGATATGCGGGGTCCAGCAGATAAGCACATTCCTCACATCCAGGGGAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295605.6
ENST00000469422.1
ENST00000489711.6
CDS CCA 72 bp CATATTGTGGTAGCTGCCACGCAATGGACATTTTGTTaGCTGGAATGTCTTCAATCTTCCAGGCCTGAAGAC +
Preference number: 6 (lower is better)
Translates to: HIVVAATQWTFC*LECLQSSRPED
Trigger: GTCTTCAGGCCTGGAAGATTGAAGACATTCCAGCCAACAAAATGTCCATTGCGTGGCAGCTACCACAATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295605.6
ENST00000469422.1
ENST00000489711.6
CDS TCA 72 bp AATAGGAAAAGCGCTCGCAGAATTCATTCACCACAATaGAGGCAATGCTCAGTGGATAGTTGGAGCCACAGA +
Preference number: 6 (lower is better)
Translates to: NRKSARRIHSPQ*RQCSVDSWSHR
Trigger: TCTGTGGCTCCAACTATCCACTGAGCATTGCCTTCATTGTGGTGAATGAATTCTGCGAGCGCTTTTCCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295605.6
ENST00000469013.1
ENST00000489711.6
CDS TCA 72 bp TGCTTCCCATTGCAAACACAACAAGTGCAATTACCATaGGCAGTCCTGGAACTCCAAAAGCCAATGCATAGC +
Preference number: 6 (lower is better)
Translates to: CFPLQTQQVQLP*AVLELQKPMHS
Trigger: GCTATGCATTGGCTTTTGGAGTTCCAGGACTGCTCATGGTAATTGCACTTGTTGTGTTTGCAATGGGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295605.6
ENST00000489711.6
ENST00000489886.1
CDS TCA 72 bp CCATCATGCTGGAGATACTGTTCCCATCTTCACGAATaGCAAGACTGTACCAGTTCTTCTCCTGCACAGAAT +
Preference number: 6 (lower is better)
Translates to: PSCWRYCSHLHE*QDCTSSSPAQN
Trigger: ATTCTGTGCAGGAGAAGAACTGGTACAGTCTTGTCATTCGTGAAGATGGGAACAGTATCTCCAGCATGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295605.6
ENST00000465060.1
ENST00000489711.6
CDS TCA 72 bp AATCAAGCTCCCTGCATTGATGGACAGGTAGAAGACTaGGAAGTATCTAGTCCGTTCCTCTGCCTTTCAAAC +
Preference number: 6 (lower is better)
Translates to: NQAPCIDGQVED*EVSSPFLCLSN
Trigger: GTTTGAAAGGCAGAGGAACGGACTAGATACTTCTCAGTCTTCTACCTGTCCATCAATGCAGGGAGCTTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489886.1
CDS CCA 72 bp TGCAAACACAACAAGTGCAATTACCATGAGCAGTCCTaGAACTCCAAAAGCCAATGCATAGCAGTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: CKHNKCNYHEQS*NSKSQCIAVFS
Trigger: GGAGAAGACTGCTATGCATTGGCTTTTGGAGTTCCAGGACTGCTCATGGTAATTGCACTTGTTGTGTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295605.6
ENST00000489711.6
ENST00000489886.1
CDS TCA 72 bp AATCAAGCTCCCTGCATTGATGGACAGGTAGAAGACTaGGAAGTATCTAGTCCGTTCCTCTGCATGTTTTTC +
Preference number: 6 (lower is better)
Translates to: NQAPCIDGQVED*EVSSPFLCMFF
Trigger: GAAAAACATGCAGAGGAACGGACTAGATACTTCTCAGTCTTCTACCTGTCCATCAATGCAGGGAGCTTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295605.6
ENST00000469013.1
ENST00000489711.6
CDS GCA 72 bp AATTACCATGAGCAGTCCTGGAACTCCAAAAGCCAATaGATAGCAGTCTTCTCCAAAACATTGCACATCTCC +
Preference number: 6 (lower is better)
Translates to: NYHEQSWNSKSQ*IAVFSKTLHIS
Trigger: GGAGATGTGCAATGTTTTGGAGAAGACTGCTATGCATTGGCTTTTGGAGTTCCAGGACTGCTCATGGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295605.6
ENST00000489711.6
ENST00000489886.1
CDS CAA 72 bp CCAACATTGAGAGAGGTATCTGTACTCAGGGAGATGTaGACATCTTTATGCAAAGTGTTAACAAACCTCACG +
Preference number: 6 (lower is better)
Translates to: PTLREVSVLREM*TSLCKVLTNLT
Trigger: CGTGAGGTTTGTTAACACTTTGCATAAAGATGTCAACATCTCCCTGAGTACAGATACCTCTCTCAATGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295605.6
ENST00000465060.1
ENST00000489711.6
CDS CAA 72 bp ACTATGTTTCCTTCAGGGGGTGGTTTATTGTATATTTaGCTTCCCATTGCAAACACAACAAGTGCAATTACC +
Preference number: 6 (lower is better)
Translates to: TMFPSGGGLLYI*LPIANTTSAIT
Trigger: GGTAATTGCACTTGTTGTGTTTGCAATGGGAAGCAAAATATACAATAAACCACCCCCTGAAGGAAACATAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295605.6
ENST00000489711.6
ENST00000489886.1