RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC13A5 (Homo sapiens)

Ensembl gene IDs: ENSG00000141485

Ensembl transcript IDs: ENST00000293800.10, ENST00000381074.8, ENST00000433363.7, ENST00000570687.1, ENST00000572094.1, ENST00000572352.5, ENST00000572727.1, ENST00000573648.5, ENST00000574580.2, ENST00000574824.5, ENST00000575230.1

Found 728 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCTTGGCCCCCACCCAGAGGAGCGTGCGCAGGGCGATCCTCTTGTaGAGGTTCCAGCGCTCCACAGCCACGGCCACGATGAGGCCGCCC +
Preference number: 1 (lower is better)
Translates to: GLAPTQRSVRRAILL*RFQRSTATATMRPP
Trigger: GGGCGGCCTCATCGTGGCCGTGGCTGTGGAGCGCTGGAACCTGCACAAGAGGATCGCCCTGCGCACGCTCCTCTGGGTGGGGGCCAAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572094.1
ENST00000575230.1
3UTR GCA 90 bp GCACCACGTTGGGTCCCGTCCCGGTCAGGGTGGCGGTGCCCCCGATaGTGGCCGCGTAGCAGATGCACAGGGTCATGGCCTTACACAACC +
Preference number: 1 (lower is better)
Translates to: APRWVPSRSGWRCPR*WPRSRCTGSWPYTT
Trigger: GGTTGTGTAAGGCCATGACCCTGTGCATCTGCTACGCGGCCAGCATCGGGGGCACCGCCACCCTGACCGGGACGGGACCCAACGTGGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572094.1
3UTR CCA 90 bp GTCCACTCTGGGCCTCAGGTGAGGGAGGGCCTAGATAGCCCACTGTaGCCCCCAGAGCGCCATCACTGCCCATACTTGGAGTGTGATCCT +
Preference number: 1 (lower is better)
Translates to: VHSGPQVREGLDSPL*PPERHHCPYLECDP
Trigger: AGGATCACACTCCAAGTATGGGCAGTGATGGCGCTCTGGGGGCCACAGTGGGCTATCTAGGCCCTCCCTCACCTGAGGCCCAGAGTGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR TCA 90 bp GTGTGGGGGATGCTTGAGGCAGAGCGGGTACAGCAGCCTGCATCCTaGTCCCTCGGCTACCTGGCCTCCCTCACAGAGATAATGGCAAGG +
Preference number: 1 (lower is better)
Translates to: VWGMLEAERVQQPAS*SLGYLASLTEIMAR
Trigger: CCTTGCCATTATCTCTGTGAGGGAGGCCAGGTAGCCGAGGGATCAGGATGCAGGCTGCTGTACCCGCTCTGCCTCAAGCATCCCCCACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR GCA 90 bp CTTCAGGAGGCTCTGATTCCCACTCGCACTCCAGCAGTGGGAGGTTaGTCAAGACCAGGCATTCCGTCCCTGGCTGGGGTGTCCCTTCCA +
Preference number: 1 (lower is better)
Translates to: LQEALIPTRTPAVGG*SRPGIPSLAGVSLP
Trigger: TGGAAGGGACACCCCAGCCAGGGACGGAATGCCTGGTCTTGAGCAACCTCCCACTGCTGGAGTGCGAGTGGGAATCAGAGCCTCCTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR TCA 90 bp TTGGTGGTGGCCACAGGAGGAGTTCCCAGAGGCTTCAGGAGGCTCTaGTTCCCACTCGCACTCCAGCAGTGGGAGGTTGCTCAAGACCAG +
Preference number: 1 (lower is better)
Translates to: LVVATGGVPRGFRRL*FPLALQQWEVAQDQ
Trigger: CTGGTCTTGAGCAACCTCCCACTGCTGGAGTGCGAGTGGGAATCAGAGCCTCCTGAAGCCTCTGGGAACTCCTCCTGTGGCCACCACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR CCA 90 bp GCACTCCAGCAGTGGGAGGTTGCTCAAGACCAGGCATTCCGTCCCTaGCTGGGGTGTCCCTTCCAGAGTGACAGAGATGATCTGAGGCTG +
Preference number: 1 (lower is better)
Translates to: ALQQWEVAQDQAFRP*LGCPFQSDRDDLRL
Trigger: CAGCCTCAGATCATCTCTGTCACTCTGGAAGGGACACCCCAGCCAGGGACGGAATGCCTGGTCTTGAGCAACCTCCCACTGCTGGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR TCA 90 bp GGGAAAGATGGGTCCAGCAGCCCACTGAGGGGTTCCCTTCATTTCTaGGCCTACCCTCCAGCTGCCCATGACCATCTCTGCATCTGGGCT +
Preference number: 1 (lower is better)
Translates to: GKDGSSSPLRGSLHF*AYPPAAHDHLCIWA
Trigger: AGCCCAGATGCAGAGATGGTCATGGGCAGCTGGAGGGTAGGCTCAGAAATGAAGGGAACCCCTCAGTGGGCTGCTGGACCCATCTTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR TCA 90 bp GGCGTCTCGGCAAATGTTGACCCAGACAACAGGGGACCAAGGAGTTaGAGGAGGCTCACTGGAGAGGTGGGACAGGGGGCCAGTCGATTA +
Preference number: 1 (lower is better)
Translates to: GVSANVDPDNRGPRS*RRLTGEVGQGASRL
Trigger: TAATCGACTGGCCCCCTGTCCCACCTCTCCAGTGAGCCTCCTTCAACTCCTTGGTCCCCTGTTGTCTGGGTCAACATTTGCCGAGACGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR GCA 90 bp CTATCTAGGACGAAGCGAGTGAAAACCAGAGCCCTGTGTGGGGGATaGTTGAGGCAGAGCGGGTACAGCAGCCTGCATCCTGATCCCTCG +
Preference number: 1 (lower is better)
Translates to: LSRTKRVKTRALCGG*LRQSGYSSLHPDPS
Trigger: CGAGGGATCAGGATGCAGGCTGCTGTACCCGCTCTGCCTCAAGCATCCCCCACACAGGGCTCTGGTTTTCACTCGCTTCGTCCTAGATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR CCA 90 bp CCAGCTGCCCATGACCATCTCTGCATCTGGGCTTGGAGGAAGAGGTaGCCCATTGGCTGGGTTTTGGTGGTGTGTGGACATCGTTGGGTC +
Preference number: 1 (lower is better)
Translates to: PAAHDHLCIWAWRKR*PIGWVLVVCGHRWV
Trigger: GACCCAACGATGTCCACACACCACCAAAACCCAGCCAATGGGCCACCTCTTCCTCCAAGCCCAGATGCAGAGATGGTCATGGGCAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR TCA 90 bp ACTGAGGGGTTCCCTTCATTTCTGAGCCTACCCTCCAGCTGCCCATaGCCATCTCTGCATCTGGGCTTGGAGGAAGAGGTGGCCCATTGG +
Preference number: 1 (lower is better)
Translates to: TEGFPSFLSLPSSCP*PSLHLGLEEEVAHW
Trigger: CCAATGGGCCACCTCTTCCTCCAAGCCCAGATGCAGAGATGGTCATGGGCAGCTGGAGGGTAGGCTCAGAAATGAAGGGAACCCCTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR TCA 90 bp AGGTTGGCCTGTGGTGCACTGTGGGTGGCAAGCCAGGTGTCGTCCTaGAGTTGGCAACTCAGATTCCTCATCCTTTGGTGGTGGCCACAG +
Preference number: 1 (lower is better)
Translates to: RLACGALWVASQVSS*SWQLRFLILWWWPQ
Trigger: CTGTGGCCACCACCAAAGGATGAGGAATCTGAGTTGCCAACTTCAGGACGACACCTGGCTTGCCACCCACAGTGCACCACAGGCCAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR GCA 90 bp TTGATCTCCGCGAAGGACAAGGGCCCCAGCTTCCGGTACTCCTCCTaGAGCACCTTGAGGGCAGCCTTCTCGTTTTTCTTGCTCTCTAGC +
Preference number: 1 (lower is better)
Translates to: LISAKDKGPSFRYSS*STLRAAFSFFLLSS
Trigger: GCTAGAGAGCAAGAAAAACGAGAAGGCTGCCCTCAAGGTGCTGCAGGAGGAGTACCGGAAGCTGGGGCCCTTGTCCTTCGCGGAGATCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572094.1
3UTR CCA 90 bp CCCAGGAACAGCATGTTGGTGTCCTTCATGTACTGGACACACACCTaGAGCGTGGCACGAAGGCCTCATCAGGACTGTCCCTTGCCACAC +
Preference number: 1 (lower is better)
Translates to: PRNSMLVSFMYWTHT*SVARRPHQDCPLPH
Trigger: GTGTGGCAAGGGACAGTCCTGATGAGGCCTTCGTGCCACGCTCCAGGTGTGTGTCCAGTACATGAAGGACACCAACATGCTGTTCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575230.1
3UTR CCA 90 bp ACGATGAGGCCGCCCAGGAACAGCATGTTGGTGTCCTTCATGTACTaGACACACACCTGGAGCGTGGCACGAAGGCCTCATCAGGACTGT +
Preference number: 1 (lower is better)
Translates to: TMRPPRNSMLVSFMY*THTWSVARRPHQDC
Trigger: ACAGTCCTGATGAGGCCTTCGTGCCACGCTCCAGGTGTGTGTCCAGTACATGAAGGACACCAACATGCTGTTCCTGGGCGGCCTCATCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575230.1
3UTR CCA 90 bp ATCCCTCGGCTACCTGGCCTCCCTCACAGAGATAATGGCAAGGCTTaGGAAAGATGGGTCCAGCAGCCCACTGAGGGGTTCCCTTCATTT +
Preference number: 1 (lower is better)
Translates to: IPRLPGLPHRDNGKA*ERWVQQPTEGFPSF
Trigger: AAATGAAGGGAACCCCTCAGTGGGCTGCTGGACCCATCTTTCCCAAGCCTTGCCATTATCTCTGTGAGGGAGGCCAGGTAGCCGAGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR CCA 90 bp GGGGCCAGTCGATTAAAACAGAACCAAGTGATGAAGGGCGTAGGTTaGCCTGTGGTGCACTGTGGGTGGCAAGCCAGGTGTCGTCCTGAA +
Preference number: 1 (lower is better)
Translates to: GASRLKQNQVMKGVG*PVVHCGWQARCRPE
Trigger: TTCAGGACGACACCTGGCTTGCCACCCACAGTGCACCACAGGCCAACCTACGCCCTTCATCACTTGGTTCTGTTTTAATCGACTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR CCA 90 bp CTACCTGGCCTCCCTCACAGAGATAATGGCAAGGCTTGGGAAAGATaGGTCCAGCAGCCCACTGAGGGGTTCCCTTCATTTCTGAGCCTA +
Preference number: 1 (lower is better)
Translates to: LPGLPHRDNGKAWER*VQQPTEGFPSFLSL
Trigger: TAGGCTCAGAAATGAAGGGAACCCCTCAGTGGGCTGCTGGACCCATCTTTCCCAAGCCTTGCCATTATCTCTGTGAGGGAGGCCAGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR CCA 90 bp AACCAAGTGATGAAGGGCGTAGGTTGGCCTGTGGTGCACTGTGGGTaGCAAGCCAGGTGTCGTCCTGAAGTTGGCAACTCAGATTCCTCA +
Preference number: 1 (lower is better)
Translates to: NQVMKGVGWPVVHCG*QARCRPEVGNSDSS
Trigger: TGAGGAATCTGAGTTGCCAACTTCAGGACGACACCTGGCTTGCCACCCACAGTGCACCACAGGCCAACCTACGCCCTTCATCACTTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR CCA 90 bp ACAGCATGTTGGTGTCCTTCATGTACTGGACACACACCTGGAGCGTaGCACGAAGGCCTCATCAGGACTGTCCCTTGCCACACACTAGAG +
Preference number: 1 (lower is better)
Translates to: TACWCPSCTGHTPGA*HEGLIRTVPCHTLE
Trigger: CTCTAGTGTGTGGCAAGGGACAGTCCTGATGAGGCCTTCGTGCCACGCTCCAGGTGTGTGTCCAGTACATGAAGGACACCAACATGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575230.1
3UTR CCA 90 bp CAGAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTTaGGGATGGCAGGGGAAGCATCTCCCAGAAAAGATGACCTGCCTG +
Preference number: 1 (lower is better)
Translates to: QSAITAHTWSVILAI*GWQGKHLPEKMTCL
Trigger: CAGGCAGGTCATCTTTTCTGGGAGATGCTTCCCCTGCCATCCCCAAATAGCTAGGATCACACTCCAAGTATGGGCAGTGATGGCGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR CCA 90 bp TCCGCGGGAGACAGAGCATTTAATGAGAGCAAGAGCTGGACAGTGTaGTCAGGAATCGTCCCACCCAAGGAACCAGACACATACTCGGTC +
Preference number: 1 (lower is better)
Translates to: SAGDRAFNESKSWTV*SGIVPPKEPDTYSV
Trigger: GACCGAGTATGTGTCTGGTTCCTTGGGTGGGACGATTCCTGACCACACTGTCCAGCTCTTGCTCTCATTAAATGCTCTGTCTCCCGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433363.7
3UTR TCA 90 bp CCACCCAAGGAACCAGACACATACTCGGTCCTTGATGGGGTTTCCTaGGGCTCTCATACTTTCTCCTGCCCTGGAAAATGCCATCCAGGA +
Preference number: 1 (lower is better)
Translates to: PPKEPDTYSVLDGVS*GSHTFSCPGKCHPG
Trigger: TCCTGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAACCCCATCAAGGACCGAGTATGTGTCTGGTTCCTTGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR TCA 90 bp GTCAGGAATCGTCCCACCCAAGGAACCAGACACATACTCGGTCCTTaGTGGGGTTTCCTGAGGCTCTCATACTTTCTCCTGCCCTGGAAA +
Preference number: 1 (lower is better)
Translates to: VRNRPTQGTRHILGP*WGFLRLSYFLLPWK
Trigger: TTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAACCCCATCAAGGACCGAGTATGTGTCTGGTTCCTTGGGTGGGACGATTCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR CCA 90 bp CAAACTGGAGCCACAGCCAGGCGAACAGCAGCATCACCAGCATGTTaGGAAAGGCAAATGCAAACCAGGAAGCAAAGTTCACGAGGTCCT +
Preference number: 1 (lower is better)
Translates to: QTGATARRTAASPAC*ERQMQTRKQSSRGP
Trigger: AGGACCTCGTGAACTTTGCTTCCTGGTTTGCATTTGCCTTTCCCAACATGCTGGTGATGCTGCTGTTCGCCTGGCTGTGGCTCCAGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572094.1
3UTR GCA 90 bp CAGCCAGGCGAACAGCAGCATCACCAGCATGTTGGGAAAGGCAAATaGAAACCAGGAAGCAAAGTTCACGAGGTCCTTGCTGTCAGGAAA +
Preference number: 1 (lower is better)
Translates to: QPGEQQHHQHVGKGK*KPGSKVHEVLAVRK
Trigger: TTTCCTGACAGCAAGGACCTCGTGAACTTTGCTTCCTGGTTTGCATTTGCCTTTCCCAACATGCTGGTGATGCTGCTGTTCGCCTGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572094.1
3UTR TCA 90 bp CGCTGCTCAATCTCAACGATCCTCTGTTGTCACCAGCCATGGCTGTaGAGGCCAGTCAACAAAGGGAAGATTTTACCCAGAGGAGCTCAA +
Preference number: 1 (lower is better)
Translates to: RCSISTILCCHQPWL*RPVNKGKILPRGAQ
Trigger: TTGAGCTCCTCTGGGTAAAATCTTCCCTTTGTTGACTGGCCTTCACAGCCATGGCTGGTGACAACAGAGGATCGTTGAGATTGAGCAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR TCA 90 bp GTCAACAAAGGGAAGATTTTACCCAGAGGAGCTCAAACGCTGGCATaGAAGACTCTGAAGTGGCATAGCCAGTGGAAATTAACAGCTGTG +
Preference number: 1 (lower is better)
Translates to: VNKGKILPRGAQTLA*KTLKWHSQWKLTAV
Trigger: CACAGCTGTTAATTTCCACTGGCTATGCCACTTCAGAGTCTTTCATGCCAGCGTTTGAGCTCCTCTGGGTAAAATCTTCCCTTTGTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR GCA 90 bp TACTTTCTCCTGCCCTGGAAAATGCCATCCAGGAGCTCATCTCTTTaGTACTGCCTCTCTTCCAGAGCAGCACAAGAAGGAAATAAAATG +
Preference number: 1 (lower is better)
Translates to: YFLLPWKMPSRSSSL*YCLSSRAAQEGNKM
Trigger: CATTTTATTTCCTTCTTGTGCTGCTCTGGAAGAGAGGCAGTAGCAAAGAGATGAGCTCCTGGATGGCATTTTCCAGGGCAGGAGAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR TCA 90 bp AGGTCTGGATGTTCCGTGGCATTCCCAAGTCACATGACATCGTTTTaGAACTCTGTCATTCATAAATGGGGCATCCCTTATGACAACAGC +
Preference number: 1 (lower is better)
Translates to: RSGCSVAFPSHMTSF*NSVIHKWGIPYDNS
Trigger: GCTGTTGTCATAAGGGATGCCCCATTTATGAATGACAGAGTTTCAAAACGATGTCATGTGACTTGGGAATGCCACGGAACATCCAGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570687.1
3UTR TCA 90 bp ACAATGGCTACAGGTCTGGATGTTCCGTGGCATTCCCAAGTCACATaGCATCGTTTTGAAACTCTGTCATTCATAAATGGGGCATCCCTT +
Preference number: 1 (lower is better)
Translates to: TMATGLDVPWHSQVT*HRFETLSFINGASL
Trigger: AAGGGATGCCCCATTTATGAATGACAGAGTTTCAAAACGATGTCATGTGACTTGGGAATGCCACGGAACATCCAGACCTGTAGCCATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570687.1
3UTR CCA 90 bp AAAGAAGAAAAGCTGCATTATAAATGTCAACAATGGCTACAGGTCTaGATGTTCCGTGGCATTCCCAAGTCACATGACATCGTTTTGAAA +
Preference number: 1 (lower is better)
Translates to: KEEKLHYKCQQWLQV*MFRGIPKSHDIVLK
Trigger: TTTCAAAACGATGTCATGTGACTTGGGAATGCCACGGAACATCCAGACCTGTAGCCATTGTTGACATTTATAATGCAGCTTTTCTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570687.1
3UTR-3UTR TCA 90 bp AGCCCAGCATCAGCCGTGCAGGCTTGGCCCCCACCCAGAGGAGCGTGCGCAGGGCAGCCACGGCCACGATaGGGCCGCCCAGGAACAGCA +
Preference number: 2 (lower is better)
Translates to: SPASAVQAWPPPRGACAGQPRPR*GRPGTA
Trigger: TGCTGTTCCTGGGCGGCCTCATCGTGGCCGTGGCTG...CCCTGCGCACGCTCCTCTGGGTGGGGGCCAAGCCTGCACGGCTGATGCTGGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572094.1
ENST00000575230.1
3UTR-3UTR CCA 90 bp AGCCCAGCATCAGCCGTGCAGGCTTGGCCCCCACCCAGAGGAGCGTGCGCAGGGTACTGGACACACACCTaGAGCGTGGCACGAAGGCCT +
Preference number: 2 (lower is better)
Translates to: SPASAVQAWPPPRGACAGYWTHT*SVARRP
Trigger: AGGCCTTCGTGCCACGCTCCAGGTGTGTGTCCAGTA...CCCTGCGCACGCTCCTCTGGGTGGGGGCCAAGCCTGCACGGCTGATGCTGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575230.1
3UTR-3UTR GCA 90 bp AGCCCACTGTGGCCCCCAGAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTGGGGACCCCAGAGGGTaGCAGCCAAGGCGTCTCGGC +
Preference number: 2 (lower is better)
Translates to: SPLWPPERHHCPYLECDPGDPRG*QPRRLG
Trigger: GCCGAGACGCCTTGGCTGGCACCCTCTGGGGTCCCC...AGGATCACACTCCAAGTATGGGCAGTGATGGCGCTCTGGGGGCCACAGTGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR TCA 90 bp AGCCCACTGTGGCCCCCAGAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTCAGCAGCCTGCATCCTaGTCCCTCGGCTACCTGGCC +
Preference number: 2 (lower is better)
Translates to: SPLWPPERHHCPYLECDPQQPAS*SLGYLA
Trigger: GGCCAGGTAGCCGAGGGATCAGGATGCAGGCTGCTG...AGGATCACACTCCAAGTATGGGCAGTGATGGCGCTCTGGGGGCCACAGTGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR GCA 90 bp AGGTTCCAGCGCTCCACAGCCACGGCCACGATGAGGCCGCCCAGGAACAGCATGAGGGCGATCCTCTTGTaGAGGTTCCAGCGCTCCACA +
Preference number: 2 (lower is better)
Translates to: RFQRSTATATMRPPRNSMRAILL*RFQRST
Trigger: TGTGGAGCGCTGGAACCTGCACAAGAGGATCGCCCT...CATGCTGTTCCTGGGCGGCCTCATCGTGGCCGTGGCTGTGGAGCGCTGGAACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572094.1
ENST00000575230.1
3UTR-3UTR GCA 90 bp CGGCCTCGGTGGCTGCGCTTGTGGCTTCCATCTGCTGCAATATGGCCTCCACGACCACCCAGAGGAGCGTaGGCAGGGCGATCCTCTTGT +
Preference number: 2 (lower is better)
Translates to: RPRWLRLWLPSAAIWPPRPPRGA*AGRSSC
Trigger: ACAAGAGGATCGCCCTGCGCACGCTCCTCTGGGTGG...TCGTGGAGGCCATATTGCAGCAGATGGAAGCCACAAGCGCAGCCACCGAGGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572094.1
3UTR CAA 90 bp GCGAAGGACAAGGGCCCCAGCTTCCGGTACTCCTCCTGCAGCACCTaGAGGGCAGCCTTCTCGTTTTTCTTGCTCTCTAGCCCGCAGCCC +
Preference number: 2 (lower is better)
Translates to: AKDKGPSFRYSSCST*RAAFSFFLLSSPQP
Trigger: GGGCTGCGGGCTAGAGAGCAAGAAAAACGAGAAGGCTGCCCTCAAGGTGCTGCAGGAGGAGTACCGGAAGCTGGGGCCCTTGTCCTTCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572094.1
3UTR-3UTR TCA 90 bp TGTCCTTCATGTACTGGACACACACCTGGAGCGTGGCACGAAGGCCTCATCAGGCAGCCACGGCCACGATaGGGCCGCCCAGGAACAGCA +
Preference number: 2 (lower is better)
Translates to: CPSCTGHTPGAWHEGLIRQPRPR*GRPGTA
Trigger: TGCTGTTCCTGGGCGGCCTCATCGTGGCCGTGGCTG...CCTGATGAGGCCTTCGTGCCACGCTCCAGGTGTGTGTCCAGTACATGAAGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575230.1
3UTR-3UTR GCA 90 bp TTGGCCCCCACCCAGAGGAGCGTGCGCAGGGCGATCCTCTTGTGCAGGTTCCAGATCAGGACTGTCCCTTaGCACACACTAGAGCCACCC +
Preference number: 2 (lower is better)
Translates to: LAPTQRSVRRAILLCRFQIRTVP*HTLEPP
Trigger: GGGTGGCTCTAGTGTGTGGCAAGGGACAGTCCTGAT...CTGGAACCTGCACAAGAGGATCGCCCTGCGCACGCTCCTCTGGGTGGGGGCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575230.1
3UTR-3UTR CCA 90 bp AGGCAGAGCGGGTACAGCAGCCTGCATCCTGATCCCTCGGCTACCTGGCCTCCCAAGGCTTGGGAAAGATaGGTCCAGCAGCCCACTGAG +
Preference number: 2 (lower is better)
Translates to: RQSGYSSLHPDPSATWPPKAWER*VQQPTE
Trigger: CTCAGTGGGCTGCTGGACCCATCTTTCCCAAGCCTT...GGGAGGCCAGGTAGCCGAGGGATCAGGATGCAGGCTGCTGTACCCGCTCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CCA 90 bp CCAGAGTGGGGCCTTCAAAAATCACTTGACTCCCTGGCAGCTCCTTGGCCTTGCTCAGCCGTGCAGGCTTaGCCCCCACCCAGAGGAGCG +
Preference number: 2 (lower is better)
Translates to: PEWGLQKSLDSLAAPWPCSAVQA*PPPRGA
Trigger: CGCTCCTCTGGGTGGGGGCCAAGCCTGCACGGCTGA...GCAAGGCCAAGGAGCTGCCAGGGAGTCAAGTGATTTTTGAAGGCCCCACTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000572094.1
3UTR-3UTR TCA 90 bp GCCAGCCAAGGCGTCTCGGCAAATGTTGACCCAGACAACAGGGGACCAAGGAGTCCCTCCAGCTGCCCATaGCCATCTCTGCATCTGGGC +
Preference number: 2 (lower is better)
Translates to: ASQGVSANVDPDNRGPRSPSSCP*PSLHLG
Trigger: GCCCAGATGCAGAGATGGTCATGGGCAGCTGGAGGG...ACTCCTTGGTCCCCTGTTGTCTGGGTCAACATTTGCCGAGACGCCTTGGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR TCA 90 bp AGCCCACTGTGGCCCCCAGAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTGGCTTCAGGAGGCTCTaGTTCCCACTCGCACTCCAG +
Preference number: 2 (lower is better)
Translates to: SPLWPPERHHCPYLECDPGFRRL*FPLALQ
Trigger: CTGGAGTGCGAGTGGGAATCAGAGCCTCCTGAAGCC...AGGATCACACTCCAAGTATGGGCAGTGATGGCGCTCTGGGGGCCACAGTGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR CAA 90 bp TCTAGGACGAAGCGAGTGAAAACCAGAGCCCTGTGTGGGGGATGCTaGAGGCAGAGCGGGTACAGCAGCCTGCATCCTGATCCCTCGGCT +
Preference number: 2 (lower is better)
Translates to: SRTKRVKTRALCGGC*RQSGYSSLHPDPSA
Trigger: AGCCGAGGGATCAGGATGCAGGCTGCTGTACCCGCTCTGCCTCAAGCATCCCCCACACAGGGCTCTGGTTTTCACTCGCTTCGTCCTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR TCA 90 bp GCCAGCCAAGGCGTCTCGGCAAATGTTGACCCAGACAACAGGGGACCAAGGAGTTGTGTGGGGGATGCTTaGGGCAGAGCGGGTACAGCA +
Preference number: 2 (lower is better)
Translates to: ASQGVSANVDPDNRGPRSCVGDA*GRAGTA
Trigger: TGCTGTACCCGCTCTGCCTCAAGCATCCCCCACACA...ACTCCTTGGTCCCCTGTTGTCTGGGTCAACATTTGCCGAGACGCCTTGGCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR GCA 90 bp GAAGGGACATGGGCACTGGTAGGTGGTTGTCTTAGCTCTCAACCAGGGGATCCGGCCCTGTGTGGGGGATaGTTGAGGCAGAGCGGGTAC +
Preference number: 2 (lower is better)
Translates to: EGTWALVGGCLSSQPGDPALCGG*LRQSGY
Trigger: GTACCCGCTCTGCCTCAAGCATCCCCCACACAGGGC...CGGATCCCCTGGTTGAGAGCTAAGACAACCACCTACCAGTGCCCATGTCCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR GCA 90 bp ACAAACTGGAGCCACAGCCAGGCGAACAGCAGCATCACCAGCATGTTGGGAAAGGCCGGCCTCGGTGGCTaGGCTTGTGGCTTCCATCTG +
Preference number: 2 (lower is better)
Translates to: TNWSHSQANSSITSMLGKAGLGG*ACGFHL
Trigger: CAGATGGAAGCCACAAGCGCAGCCACCGAGGCCGGC...CTTTCCCAACATGCTGGTGATGCTGCTGTTCGCCTGGCTGTGGCTCCAGTTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572094.1
3UTR CAA 90 bp GGCCTGTGGTGCACTGTGGGTGGCAAGCCAGGTGTCGTCCTGAAGTaGGCAACTCAGATTCCTCATCCTTTGGTGGTGGCCACAGGAGGA +
Preference number: 2 (lower is better)
Translates to: GLWCTVGGKPGVVLK*ATQIPHPLVVATGG
Trigger: TCCTCCTGTGGCCACCACCAAAGGATGAGGAATCTGAGTTGCCAACTTCAGGACGACACCTGGCTTGCCACCCACAGTGCACCACAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR TCA 90 bp GCCATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTTGGGGATGGCAGGGGCCCTCCAGCTGCCCATaGCCATCTCTGCATCTGGGC +
Preference number: 2 (lower is better)
Translates to: AITAHTWSVILAIWGWQGPSSCP*PSLHLG
Trigger: GCCCAGATGCAGAGATGGTCATGGGCAGCTGGAGGG...CCCCTGCCATCCCCAAATAGCTAGGATCACACTCCAAGTATGGGCAGTGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR TCA 90 bp AGTAGATTGGCCCACGGGCAGGGGTTGTTTGCTGAGAGATCACCAAGCGCTGCTGGTCCAGCAGCCCACTaGGGGGTTCCCTTCATTTCT +
Preference number: 2 (lower is better)
Translates to: SRLAHGQGLFAERSPSAAGPAAH*GVPFIS
Trigger: AGAAATGAAGGGAACCCCTCAGTGGGCTGCTGGACC...AGCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGCCCGTGGGCCAATCTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR TCA 90 bp TGGACAGTGTGGTCAGGAATCGTCCCACCCAAGGAACCAGACACATACTCGGTCTGTGTGGGGGATGCTTaGGGCAGAGCGGGTACAGCA +
Preference number: 2 (lower is better)
Translates to: WTVWSGIVPPKEPDTYSVCVGDA*GRAGTA
Trigger: TGCTGTACCCGCTCTGCCTCAAGCATCCCCCACACA...GACCGAGTATGTGTCTGGTTCCTTGGGTGGGACGATTCCTGACCACACTGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR TCA 90 bp TTCCGTCCCTGGCTGGGGTGTCCCTTCCAGAGTGACAGAGATGATCTGAGGCTGCTAGGACGAAGCGAGTaGAAACCAGAGCCCTGTGTG +
Preference number: 2 (lower is better)
Translates to: FRPWLGCPFQSDRDDLRLLGRSE*KPEPCV
Trigger: CACACAGGGCTCTGGTTTTCACTCGCTTCGTCCTAG...CAGCCTCAGATCATCTCTGTCACTCTGGAAGGGACACCCCAGCCAGGGACGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CCA 90 bp ACCCAGACAACAGGGGACCAAGGAGTTGAAGGAGGCTCACTGGAGAGGTGGGACGAAGAGGTGGCCCATTaGCTGGGTTTTGGTGGTGTG +
Preference number: 2 (lower is better)
Translates to: TQTTGDQGVEGGSLERWDEEVAH*LGFGGV
Trigger: CACACCACCAAAACCCAGCCAATGGGCCACCTCTTC...GTCCCACCTCTCCAGTGAGCCTCCTTCAACTCCTTGGTCCCCTGTTGTCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CCA 90 bp GCCCACGGGCAGGGGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACTGCTCAAGGTGAGCTaGAAGGGACATGGGCACTGG +
Preference number: 2 (lower is better)
Translates to: AHGQGLFAERSPSAAQSQLLKVS*KGHGHW
Trigger: CCAGTGCCCATGTCCCTTCCAGCTCACCTTGAGCAG...TTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGCCCGTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CCA 90 bp GAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTTGGGGATGGCAGGCTCACTGGAGAGGTaGGACAGGGGGCCAGTCGAT +
Preference number: 2 (lower is better)
Translates to: ERHHCPYLECDPSYLGMAGSLER*DRGPVD
Trigger: ATCGACTGGCCCCCTGTCCCACCTCTCCAGTGAGCC...TGCCATCCCCAAATAGCTAGGATCACACTCCAAGTATGGGCAGTGATGGCGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CCA 90 bp GTGTGGTCAGGAATCGTCCCACCCAAGGAACCAGACACATACTCGGTCCTTGATCAGCTGTGTCCACTCTaGGCCTCAGGTGAGGGAGGG +
Preference number: 2 (lower is better)
Translates to: VWSGIVPPKEPDTYSVLDQLCPL*ASGEGG
Trigger: CCCTCCCTCACCTGAGGCCCAGAGTGGACACAGCTG...ATCAAGGACCGAGTATGTGTCTGGTTCCTTGGGTGGGACGATTCCTGACCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CCA 90 bp GTTGGGAAAGGCAAATGCAAACCAGGAAGCAAAGTTCACGAGGTCCTTGCTGTCCCAGGAGCACCACGTTaGGTCCCGTCCCGGTCAGGG +
Preference number: 2 (lower is better)
Translates to: VGKGKCKPGSKVHEVLAVPGAPR*VPSRSG
Trigger: CCCTGACCGGGACGGGACCCAACGTGGTGCTCCTGG...GACAGCAAGGACCTCGTGAACTTTGCTTCCTGGTTTGCATTTGCCTTTCCCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572094.1
3UTR CAA 90 bp CTCTGCATCTGGGCTTGGAGGAAGAGGTGGCCCATTGGCTGGGTTTaGGTGGTGTGTGGACATCGTTGGGTCATTTTGGGGTGTGAACCC +
Preference number: 2 (lower is better)
Translates to: LCIWAWRKRWPIGWV*VVCGHRWVILGCEP
Trigger: GGGTTCACACCCCAAAATGACCCAACGATGTCCACACACCACCAAAACCCAGCCAATGGGCCACCTCTTCCTCCAAGCCCAGATGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR CAA 90 bp AAGCCAGGTGTCGTCCTGAAGTTGGCAACTCAGATTCCTCATCCTTaGGTGGTGGCCACAGGAGGAGTTCCCAGAGGCTTCAGGAGGCTC +
Preference number: 2 (lower is better)
Translates to: KPGVVLKLATQIPHP*VVATGGVPRGFRRL
Trigger: GAGCCTCCTGAAGCCTCTGGGAACTCCTCCTGTGGCCACCACCAAAGGATGAGGAATCTGAGTTGCCAACTTCAGGACGACACCTGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR TCA 90 bp TGGACAGTGTGGTCAGGAATCGTCCCACCCAAGGAACCAGACACATACTCGGTCAGGGGACCAAGGAGTTaGAGGAGGCTCACTGGAGAG +
Preference number: 2 (lower is better)
Translates to: WTVWSGIVPPKEPDTYSVRGPRS*RRLTGE
Trigger: CTCTCCAGTGAGCCTCCTTCAACTCCTTGGTCCCCT...GACCGAGTATGTGTCTGGTTCCTTGGGTGGGACGATTCCTGACCACACTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR GCA 90 bp TGCCATCCAGGAGCTCATCTCTTTGCTACTGCCTCTCTTCCAGAGCAGCACAAGGCGGGTACAGCAGCCTaGATCCTGATCCCTCGGCTA +
Preference number: 2 (lower is better)
Translates to: CHPGAHLFATASLPEQHKAGTAA*ILIPRL
Trigger: TAGCCGAGGGATCAGGATGCAGGCTGCTGTACCCGC...CTTGTGCTGCTCTGGAAGAGAGGCAGTAGCAAAGAGATGAGCTCCTGGATGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR GCA 90 bp TGGACAGTGTGGTCAGGAATCGTCCCACCCAAGGAACCAGACACATACTCGGTCCCAGCAGTGGGAGGTTaGTCAAGACCAGGCATTCCG +
Preference number: 2 (lower is better)
Translates to: WTVWSGIVPPKEPDTYSVPAVGG*SRPGIP
Trigger: CGGAATGCCTGGTCTTGAGCAACCTCCCACTGCTGG...GACCGAGTATGTGTCTGGTTCCTTGGGTGGGACGATTCCTGACCACACTGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CCA 90 bp ACCCAGACAACAGGGGACCAAGGAGTTGAAGGAGGCTCACTGGAGAGGTGGGACTTGGCTGGGTTTTGGTaGTGTGTGGACATCGTTGGG +
Preference number: 2 (lower is better)
Translates to: TQTTGDQGVEGGSLERWDLAGFW*CVDIVG
Trigger: CCCAACGATGTCCACACACCACCAAAACCCAGCCAA...GTCCCACCTCTCCAGTGAGCCTCCTTCAACTCCTTGGTCCCCTGTTGTCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CCA 90 bp GCCCACGGGCAGGGGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAAAGGTGGCCCATTGGCTaGGTTTTGGTGGTGTGTGGA +
Preference number: 2 (lower is better)
Translates to: AHGQGLFAERSPSAAQSQRWPIG*VLVVCG
Trigger: TCCACACACCACCAAAACCCAGCCAATGGGCCACCT...TTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGCCCGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CCA 90 bp TTTCCTGAGGCTCTCATACTTTCTCCTGCCCTGGAAAATGCCATCCAGGAGCTCCAGGCATTCCGTCCCTaGCTGGGGTGTCCCTTCCAG +
Preference number: 2 (lower is better)
Translates to: FPEALILSPALENAIQELQAFRP*LGCPFQ
Trigger: CTGGAAGGGACACCCCAGCCAGGGACGGAATGCCTG...GAGCTCCTGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CCA 90 bp TTTCCTGAGGCTCTCATACTTTCTCCTGCCCTGGAAAATGCCATCCAGGAGCTCGCCTGTGGTGCACTGTaGGTGGCAAGCCAGGTGTCG +
Preference number: 2 (lower is better)
Translates to: FPEALILSPALENAIQELACGAL*VASQVS
Trigger: CGACACCTGGCTTGCCACCCACAGTGCACCACAGGC...GAGCTCCTGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CCA 90 bp TGTGGCCCCCAGAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTATGAAGGGCGTAGGTTaGCCTGTGGTGCACTGTGGG +
Preference number: 2 (lower is better)
Translates to: CGPQSAITAHTWSVILAIMKGVG*PVVHCG
Trigger: CCCACAGTGCACCACAGGCCAACCTACGCCCTTCAT...AATAGCTAGGATCACACTCCAAGTATGGGCAGTGATGGCGCTCTGGGGGCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR TCA 90 bp TGCCATCCAGGAGCTCATCTCTTTGCTACTGCCTCTCTTCCAGAGCAGCACAAGGGTCCAGCAGCCCACTaGGGGGTTCCCTTCATTTCT +
Preference number: 2 (lower is better)
Translates to: CHPGAHLFATASLPEQHKGPAAH*GVPFIS
Trigger: AGAAATGAAGGGAACCCCTCAGTGGGCTGCTGGACC...CTTGTGCTGCTCTGGAAGAGAGGCAGTAGCAAAGAGATGAGCTCCTGGATGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR TCA 90 bp GCCATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTTGGGGATGGCAGGGGCTAGGACGAAGCGAGTaGAAACCAGAGCCCTGTGTG +
Preference number: 2 (lower is better)
Translates to: AITAHTWSVILAIWGWQGLGRSE*KPEPCV
Trigger: CACACAGGGCTCTGGTTTTCACTCGCTTCGTCCTAG...CCCCTGCCATCCCCAAATAGCTAGGATCACACTCCAAGTATGGGCAGTGATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR TCA 90 bp AGTAGATTGGCCCACGGGCAGGGGTTGTTTGCTGAGAGATCACCAAGCGCTGCTAGCCAGGTGTCGTCCTaGAGTTGGCAACTCAGATTC +
Preference number: 2 (lower is better)
Translates to: SRLAHGQGLFAERSPSAASQVSS*SWQLRF
Trigger: GAATCTGAGTTGCCAACTTCAGGACGACACCTGGCT...AGCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGCCCGTGGGCCAATCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR TCA 90 bp TGCCATCCAGGAGCTCATCTCTTTGCTACTGCCTCTCTTCCAGAGCAGCACAAGAGGGGACCAAGGAGTTaGAGGAGGCTCACTGGAGAG +
Preference number: 2 (lower is better)
Translates to: CHPGAHLFATASLPEQHKRGPRS*RRLTGE
Trigger: CTCTCCAGTGAGCCTCCTTCAACTCCTTGGTCCCCT...CTTGTGCTGCTCTGGAAGAGAGGCAGTAGCAAAGAGATGAGCTCCTGGATGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR TCA 90 bp TGGGGTTTCCTGAGGCTCTCATACTTTCTCCTGCCCTGGAAAATGCCATCCAGGCACCAGCCATGGCTGTaGAGGCCAGTCAACAAAGGG +
Preference number: 2 (lower is better)
Translates to: WGFLRLSYFLLPWKMPSRHQPWL*RPVNKG
Trigger: CCCTTTGTTGACTGGCCTTCACAGCCATGGCTGGTG...CCTGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR GCA 90 bp TGTGGCCCCCAGAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTGCCCATGACCATCTCTaGATCTGGGCTTGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: CGPQSAITAHTWSVILAIAHDHL*IWAWRK
Trigger: CTTCCTCCAAGCCCAGATGCAGAGATGGTCATGGGC...AATAGCTAGGATCACACTCCAAGTATGGGCAGTGATGGCGCTCTGGGGGCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR GCA 90 bp GTTGGGAAAGGCAAATGCAAACCAGGAAGCAAAGTTCACGAGGTCCTTGCTGTCCGCTCTTGGTCTTCCTaGTGCCCCAGAGTGGGGCCT +
Preference number: 2 (lower is better)
Translates to: VGKGKCKPGSKVHEVLAVRSWSS*CPRVGP
Trigger: AGGCCCCACTCTGGGGCAGCAGGAAGACCAAGAGCG...GACAGCAAGGACCTCGTGAACTTTGCTTCCTGGTTTGCATTTGCCTTTCCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572094.1
3UTR-3UTR CCA 90 bp TGGACAGTGTGGTCAGGAATCGTCCCACCCAAGGAACCAGACACATACTCGGTCGCTTGGAGGAAGAGGTaGCCCATTGGCTGGGTTTTG +
Preference number: 2 (lower is better)
Translates to: WTVWSGIVPPKEPDTYSVAWRKR*PIGWVL
Trigger: CAAAACCCAGCCAATGGGCCACCTCTTCCTCCAAGC...GACCGAGTATGTGTCTGGTTCCTTGGGTGGGACGATTCCTGACCACACTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CCA 90 bp TGGGGTTTCCTGAGGCTCTCATACTTTCTCCTGCCCTGGAAAATGCCATCCAGGCTGCTCAAGGTGAGCTaGAAGGGACATGGGCACTGG +
Preference number: 2 (lower is better)
Translates to: WGFLRLSYFLLPWKMPSRLLKVS*KGHGHW
Trigger: CCAGTGCCCATGTCCCTTCCAGCTCACCTTGAGCAG...CCTGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CCA 90 bp TGCCATCCAGGAGCTCATCTCTTTGCTACTGCCTCTCTTCCAGAGCAGCACAAGCTCGCACTCCAGCAGTaGGAGGTTGCTCAAGACCAG +
Preference number: 2 (lower is better)
Translates to: CHPGAHLFATASLPEQHKLALQQ*EVAQDQ
Trigger: CTGGTCTTGAGCAACCTCCCACTGCTGGAGTGCGAG...CTTGTGCTGCTCTGGAAGAGAGGCAGTAGCAAAGAGATGAGCTCCTGGATGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CCA 90 bp TTTCCTGAGGCTCTCATACTTTCTCCTGCCCTGGAAAATGCCATCCAGGAGCTCGTGGTGCACTGTGGGTaGCAAGCCAGGTGTCGTCCT +
Preference number: 2 (lower is better)
Translates to: FPEALILSPALENAIQELVVHCG*QARCRP
Trigger: AGGACGACACCTGGCTTGCCACCCACAGTGCACCAC...GAGCTCCTGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CCA 90 bp TGCCATCCAGGAGCTCATCTCTTTGCTACTGCCTCTCTTCCAGAGCAGCACAAGATGAAGGGCGTAGGTTaGCCTGTGGTGCACTGTGGG +
Preference number: 2 (lower is better)
Translates to: CHPGAHLFATASLPEQHKMKGVG*PVVHCG
Trigger: CCCACAGTGCACCACAGGCCAACCTACGCCCTTCAT...CTTGTGCTGCTCTGGAAGAGAGGCAGTAGCAAAGAGATGAGCTCCTGGATGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CCA 90 bp GCCCACGGGCAGGGGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACTAGCTATTTGGGGATaGCAGGGGAAGCATCTCCCA +
Preference number: 2 (lower is better)
Translates to: AHGQGLFAERSPSAAQSQLAIWG*QGKHLP
Trigger: TGGGAGATGCTTCCCCTGCCATCCCCAAATAGCTAG...TTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGCCCGTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CCA 90 bp ACAAACTGGAGCCACAGCCAGGCGAACAGCAGCATCACCAGCATGTTGGGAAAGCCATCTGCTGCAATATaGCCTCCACGATGGGCACCA +
Preference number: 2 (lower is better)
Translates to: TNWSHSQANSSITSMLGKPSAAI*PPRWAP
Trigger: TGGTGCCCATCGTGGAGGCCATATTGCAGCAGATGG...CTTTCCCAACATGCTGGTGATGCTGCTGTTCGCCTGGCTGTGGCTCCAGTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572094.1
3UTR CAA 90 bp GGTCAGGAATCGTCCCACCCAAGGAACCAGACACATACTCGGTCCTaGATGGGGTTTCCTGAGGCTCTCATACTTTCTCCTGCCCTGGAA +
Preference number: 2 (lower is better)
Translates to: GQESSHPRNQTHTRS*MGFPEALILSPALE
Trigger: TTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAACCCCATCAAGGACCGAGTATGTGTCTGGTTCCTTGGGTGGGACGATTCCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR TCA 90 bp TTTCCTGAGGCTCTCATACTTTCTCCTGCCCTGGAAAATGCCATCCAGGAGCTCCACCAGCCATGGCTGTaGAGGCCAGTCAACAAAGGG +
Preference number: 2 (lower is better)
Translates to: FPEALILSPALENAIQELHQPWL*RPVNKG
Trigger: CCCTTTGTTGACTGGCCTTCACAGCCATGGCTGGTG...GAGCTCCTGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR TCA 90 bp TTTCCTGAGGCTCTCATACTTTCTCCTGCCCTGGAAAATGCCATCCAGGAGCTCGCAGGGGTTGTTTGCTaGGAGATCACCAAGCGCTGC +
Preference number: 2 (lower is better)
Translates to: FPEALILSPALENAIQELAGVVC*EITKRC
Trigger: GCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGC...GAGCTCCTGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR GCA 90 bp CCAGCCATGGCTGTGAAGGCCAGTCAACAAAGGGAAGATTTTACCCAGAGGAGCGCCCATGACCATCTCTaGATCTGGGCTTGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: PAMAVKASQQREDFTQRSAHDHL*IWAWRK
Trigger: CTTCCTCCAAGCCCAGATGCAGAGATGGTCATGGGC...GCTCCTCTGGGTAAAATCTTCCCTTTGTTGACTGGCCTTCACAGCCATGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR GCA 90 bp AAGACTCTGAAGTGGCATAGCCAGTGGAAATTAACAGCTGTGTCCACTCTGGGCGCGGGTACAGCAGCCTaGATCCTGATCCCTCGGCTA +
Preference number: 2 (lower is better)
Translates to: KTLKWHSQWKLTAVSTLGAGTAA*ILIPRL
Trigger: TAGCCGAGGGATCAGGATGCAGGCTGCTGTACCCGC...GCCCAGAGTGGACACAGCTGTTAATTTCCACTGGCTATGCCACTTCAGAGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR GCA 90 bp TGGACAGTGTGGTCAGGAATCGTCCCACCCAAGGAACCAGACACATACTCGGTCCCAGAGCGCCATCACTaGCCATACTTGGAGTGTGAT +
Preference number: 2 (lower is better)
Translates to: WTVWSGIVPPKEPDTYSVPERHH*PYLECD
Trigger: ATCACACTCCAAGTATGGGCAGTGATGGCGCTCTGG...GACCGAGTATGTGTCTGGTTCCTTGGGTGGGACGATTCCTGACCACACTGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CCA 90 bp TGCCATCCAGGAGCTCATCTCTTTGCTACTGCCTCTCTTCCAGAGCAGCACAAGGCTTGGAGGAAGAGGTaGCCCATTGGCTGGGTTTTG +
Preference number: 2 (lower is better)
Translates to: CHPGAHLFATASLPEQHKAWRKR*PIGWVL
Trigger: CAAAACCCAGCCAATGGGCCACCTCTTCCTCCAAGC...CTTGTGCTGCTCTGGAAGAGAGGCAGTAGCAAAGAGATGAGCTCCTGGATGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CCA 90 bp TGGGGTTTCCTGAGGCTCTCATACTTTCTCCTGCCCTGGAAAATGCCATCCAGGAAGGCTTGGGAAAGATaGGTCCAGCAGCCCACTGAG +
Preference number: 2 (lower is better)
Translates to: WGFLRLSYFLLPWKMPSRKAWER*VQQPTE
Trigger: CTCAGTGGGCTGCTGGACCCATCTTTCCCAAGCCTT...CCTGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CCA 90 bp GGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACGATCCTCTGTTGGTGGTGCACTGTGGGTaGCAAGCCAGGTGTCGTCCT +
Preference number: 2 (lower is better)
Translates to: GCLLRDHQALLNLNDPLLVVHCG*QARCRP
Trigger: AGGACGACACCTGGCTTGCCACCCACAGTGCACCAC...CAACAGAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR GCA 90 bp TGGACAGTGTGGTCAGGAATCGTCCCACCCAAGGAACCAGACACATACTCGGTCGAGATCACCAAGCGCTaGTCAATCTCAACGATCCTC +
Preference number: 2 (lower is better)
Translates to: WTVWSGIVPPKEPDTYSVEITKR*SISTIL
Trigger: GAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTC...GACCGAGTATGTGTCTGGTTCCTTGGGTGGGACGATTCCTGACCACACTGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CCA 90 bp GTGTGGTCAGGAATCGTCCCACCCAAGGAACCAGACACATACTCGGTCCTTGATTTGGCTGGGTTTTGGTaGTGTGTGGACATCGTTGGG +
Preference number: 2 (lower is better)
Translates to: VWSGIVPPKEPDTYSVLDLAGFW*CVDIVG
Trigger: CCCAACGATGTCCACACACCACCAAAACCCAGCCAA...ATCAAGGACCGAGTATGTGTCTGGTTCCTTGGGTGGGACGATTCCTGACCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CCA 90 bp GCCATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTTGGGGATGGCAGGGGGATAATGGCAAGGCTTaGGAAAGATGGGTCCAGCAG +
Preference number: 2 (lower is better)
Translates to: AITAHTWSVILAIWGWQGDNGKA*ERWVQQ
Trigger: CTGCTGGACCCATCTTTCCCAAGCCTTGCCATTATC...CCCCTGCCATCCCCAAATAGCTAGGATCACACTCCAAGTATGGGCAGTGATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CCA 90 bp AAGACTCTGAAGTGGCATAGCCAGTGGAAATTAACAGCTGTGTCCACTCTGGGCCTCGCACTCCAGCAGTaGGAGGTTGCTCAAGACCAG +
Preference number: 2 (lower is better)
Translates to: KTLKWHSQWKLTAVSTLGLALQQ*EVAQDQ
Trigger: CTGGTCTTGAGCAACCTCCCACTGCTGGAGTGCGAG...GCCCAGAGTGGACACAGCTGTTAATTTCCACTGGCTATGCCACTTCAGAGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CCA 90 bp TGGGGTTTCCTGAGGCTCTCATACTTTCTCCTGCCCTGGAAAATGCCATCCAGGAGATTCCTCATCCTTTaGTGGTGGCCACAGGAGGAG +
Preference number: 2 (lower is better)
Translates to: WGFLRLSYFLLPWKMPSRRFLIL*WWPQEE
Trigger: CTCCTCCTGTGGCCACCACCAAAGGATGAGGAATCT...CCTGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CCA 90 bp TGGGGTTTCCTGAGGCTCTCATACTTTCTCCTGCCCTGGAAAATGCCATCCAGGCTAGCTATTTGGGGATaGCAGGGGAAGCATCTCCCA +
Preference number: 2 (lower is better)
Translates to: WGFLRLSYFLLPWKMPSRLAIWG*QGKHLP
Trigger: TGGGAGATGCTTCCCCTGCCATCCCCAAATAGCTAG...CCTGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR CAA 90 bp GTCTTTGTCCGAGTAACTTCAAGTAGATTGGCCCACGGGCAGGGGTaGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACGATCC +
Preference number: 2 (lower is better)
Translates to: VFVRVTSSRLAHGQG*FAERSPSAAQSQRS
Trigger: GGATCGTTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGCCCGTGGGCCAATCTACTTGAAGTTACTCGGACAAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR TCA 90 bp CCAGCCATGGCTGTGAAGGCCAGTCAACAAAGGGAAGATTTTACCCAGAGGAGCTGGCATGAAAGACTCTaGAGTGGCATAGCCAGTGGA +
Preference number: 2 (lower is better)
Translates to: PAMAVKASQQREDFTQRSWHERL*SGIASG
Trigger: TCCACTGGCTATGCCACTTCAGAGTCTTTCATGCCA...GCTCCTCTGGGTAAAATCTTCCCTTTGTTGACTGGCCTTCACAGCCATGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR GCA 90 bp AAATGCCATCCAGGAGCTCATCTCTTTGCTACTGCCTCTCTTCCAGAGCAGCACCCAGAGCGCCATCACTaGCCATACTTGGAGTGTGAT +
Preference number: 2 (lower is better)
Translates to: KCHPGAHLFATASLPEQHPERHH*PYLECD
Trigger: ATCACACTCCAAGTATGGGCAGTGATGGCGCTCTGG...GTGCTGCTCTGGAAGAGAGGCAGTAGCAAAGAGATGAGCTCCTGGATGGCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR GCA 90 bp TGCAAACCAGGAAGCAAAGTTCACGAGGTCCTTGCTGTCAGGAAACAACTCGTTTGGCCGCGTAGCAGATaGACAGGGTCATGGCCTTAC +
Preference number: 2 (lower is better)
Translates to: CKPGSKVHEVLAVRKQLVWPRSR*TGSWPY
Trigger: GTAAGGCCATGACCCTGTGCATCTGCTACGCGGCCA...AACGAGTTGTTTCCTGACAGCAAGGACCTCGTGAACTTTGCTTCCTGGTTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572094.1
3UTR-3UTR CCA 90 bp GGAAATAAAATGGACTTGCGGGGGAAAGAAGATGCTTGTCTCTCATGTCTGTCTCAGGCATTCCGTCCCTaGCTGGGGTGTCCCTTCCAG +
Preference number: 2 (lower is better)
Translates to: GNKMDLRGKEDACLSCLSQAFRP*LGCPFQ
Trigger: CTGGAAGGGACACCCCAGCCAGGGACGGAATGCCTG...AGACAGACATGAGAGACAAGCATCTTCTTTCCCCCGCAAGTCCATTTTATTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CCA 90 bp GGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACGATCCTCTGTTGCTCATCCTTTGGTGGTaGCCACAGGAGGAGTTCCCA +
Preference number: 2 (lower is better)
Translates to: GCLLRDHQALLNLNDPLLLILWW*PQEEFP
Trigger: TGGGAACTCCTCCTGTGGCCACCACCAAAGGATGAG...CAACAGAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CCA 90 bp TGGGGTTTCCTGAGGCTCTCATACTTTCTCCTGCCCTGGAAAATGCCATCCAGGGTTGTTGCCCCACTTTaGGGTCTTTGTCCGAGTAAC +
Preference number: 2 (lower is better)
Translates to: WGFLRLSYFLLPWKMPSRVVAPL*GLCPSN
Trigger: GTTACTCGGACAAAGACCCCAAAGTGGGGCAACAAC...CCTGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CCA 90 bp CAGGAAGCAAAGTTCACGAGGTCCTTGCTGTCAGGAAACAACTCGTTCATCTGGAATCACTTGACTCCCTaGCAGCTCCTTGGCCTTGCC +
Preference number: 2 (lower is better)
Translates to: QEAKFTRSLLSGNNSFIWNHLTP*QLLGLA
Trigger: GGCAAGGCCAAGGAGCTGCCAGGGAGTCAAGTGATT...CCAGATGAACGAGTTGTTTCCTGACAGCAAGGACCTCGTGAACTTTGCTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572094.1
3UTR CAA 90 bp TTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACGATCCTCTGTaGTCACCAGCCATGGCTGTGAAGGCCAGTCAACAAAGGGAAGAT +
Preference number: 2 (lower is better)
Translates to: LLRDHQALLNLNDPL*SPAMAVKASQQRED
Trigger: ATCTTCCCTTTGTTGACTGGCCTTCACAGCCATGGCTGGTGACAACAGAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR TCA 90 bp TTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACGATCCTCTGTTGTCACCAAGCCAGGTGTCGTCCTaGAGTTGGCAACTCAGATTC +
Preference number: 2 (lower is better)
Translates to: LLRDHQALLNLNDPLLSPSQVSS*SWQLRF
Trigger: GAATCTGAGTTGCCAACTTCAGGACGACACCTGGCT...TGGTGACAACAGAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CCA 90 bp GGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACGATCCTCTGTTGTTCCTCATCCTTTGGTaGTGGCCACAGGAGGAGTTC +
Preference number: 2 (lower is better)
Translates to: GCLLRDHQALLNLNDPLLFLILW*WPQEEF
Trigger: GAACTCCTCCTGTGGCCACCACCAAAGGATGAGGAA...CAACAGAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CCA 90 bp AAGACTCTGAAGTGGCATAGCCAGTGGAAATTAACAGCTGTGTCCACTCTGGGCTTCCTCATCCTTTGGTaGTGGCCACAGGAGGAGTTC +
Preference number: 2 (lower is better)
Translates to: KTLKWHSQWKLTAVSTLGFLILW*WPQEEF
Trigger: GAACTCCTCCTGTGGCCACCACCAAAGGATGAGGAA...GCCCAGAGTGGACACAGCTGTTAATTTCCACTGGCTATGCCACTTCAGAGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CCA 90 bp TTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACGATCCTCTGTTGTCACCAAGATTCCTCATCCTTTaGTGGTGGCCACAGGAGGAG +
Preference number: 2 (lower is better)
Translates to: LLRDHQALLNLNDPLLSPRFLIL*WWPQEE
Trigger: CTCCTCCTGTGGCCACCACCAAAGGATGAGGAATCT...TGGTGACAACAGAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CCA 90 bp CCAGCCATGGCTGTGAAGGCCAGTCAACAAAGGGAAGATTTTACCCAGAGGAGCGGTTTTGGTGGTGTGTaGACATCGTTGGGTCATTTT +
Preference number: 2 (lower is better)
Translates to: PAMAVKASQQREDFTQRSGFGGV*TSLGHF
Trigger: AAAATGACCCAACGATGTCCACACACCACCAAAACC...GCTCCTCTGGGTAAAATCTTCCCTTTGTTGACTGGCCTTCACAGCCATGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CCA 90 bp CAGGAAGCAAAGTTCACGAGGTCCTTGCTGTCAGGAAACAACTCGTTCATCTGGAGATGCACAGGGTCATaGCCTTACACAACCTCTTCC +
Preference number: 2 (lower is better)
Translates to: QEAKFTRSLLSGNNSFIWRCTGS*PYTTSS
Trigger: GGAAGAGGTTGTGTAAGGCCATGACCCTGTGCATCT...CCAGATGAACGAGTTGTTTCCTGACAGCAAGGACCTCGTGAACTTTGCTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572094.1
3UTR-3UTR CCA 90 bp TTTCCTGAGGCTCTCATACTTTCTCCTGCCCTGGAAAATGCCATCCAGGAGCTCAAGTGGCATAGCCAGTaGAAATTAACAGCTGTGTCC +
Preference number: 2 (lower is better)
Translates to: FPEALILSPALENAIQELKWHSQ*KLTAVS
Trigger: GGACACAGCTGTTAATTTCCACTGGCTATGCCACTT...GAGCTCCTGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CCA 90 bp CAACAATGGCTACAGGTCTGGATGTTCCGTGGCATTCCCAAGTCACATGACATCTCTGTCATTCATAAATaGGGCATCCCTTATGACAAC +
Preference number: 2 (lower is better)
Translates to: QQWLQVWMFRGIPKSHDISVIHK*GIPYDN
Trigger: GTTGTCATAAGGGATGCCCCATTTATGAATGACAGA...GATGTCATGTGACTTGGGAATGCCACGGAACATCCAGACCTGTAGCCATTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570687.1
3UTR-3UTR CCA 90 bp GGAAATAAAATGGACTTGCGGGGGAAAGAAGATGCTTGTCTCTCATGTCTGTCTGGTTTTGGTGGTGTGTaGACATCGTTGGGTCATTTT +
Preference number: 2 (lower is better)
Translates to: GNKMDLRGKEDACLSCLSGFGGV*TSLGHF
Trigger: AAAATGACCCAACGATGTCCACACACCACCAAAACC...AGACAGACATGAGAGACAAGCATCTTCTTTCCCCCGCAAGTCCATTTTATTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR GCA 72 bp CCCACCCAGAGGAGCGTGCGCAGGGCGATCCTCTTGTaGAGGTTCCAGCGCTCCACAGCCACGGCCACGATG +
Preference number: 3 (lower is better)
Translates to: PTQRSVRRAILL*RFQRSTATATM
Trigger: CATCGTGGCCGTGGCTGTGGAGCGCTGGAACCTGCACAAGAGGATCGCCCTGCGCACGCTCCTCTGGGTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572094.1
ENST00000575230.1
3UTR GCA 72 bp TCAGCCGTGCAGGCTTGGCCCCCACCCAGAGGAGCGTaGGCAGGGCGATCCTCTTGTGCAGGTTCCAGCGCT +
Preference number: 3 (lower is better)
Translates to: SAVQAWPPPRGA*AGRSSCAGSSA
Trigger: AGCGCTGGAACCTGCACAAGAGGATCGCCCTGCGCACGCTCCTCTGGGTGGGGGCCAAGCCTGCACGGCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572094.1
ENST00000575230.1
3UTR-3UTR CAA 90 bp CCAGCATCAGCCGTGCAGGCTTGGCCCCCACCCAGAGGAGCGTGCGCAGGGCGACATCAGGACTGTCCCTaGCCACACACTAGAGCCACC +
Preference number: 3 (lower is better)
Translates to: PASAVQAWPPPRGACAGRHQDCP*PHTRAT
Trigger: GGTGGCTCTAGTGTGTGGCAAGGGACAGTCCTGATG...TCGCCCTGCGCACGCTCCTCTGGGTGGGGGCCAAGCCTGCACGGCTGATGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575230.1
3UTR CCA 72 bp GAAACAACTCGTTCATCTGGCCCAGGAGCACCACGTTaGGTCCCGTCCCGGTCAGGGTGGCGGTGCCCCCGA +
Preference number: 3 (lower is better)
Translates to: ETTRSSGPGAPR*VPSRSGWRCPR
Trigger: TCGGGGGCACCGCCACCCTGACCGGGACGGGACCCAACGTGGTGCTCCTGGGCCAGATGAACGAGTTGTTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572094.1
3UTR-3UTR CAA 90 bp CCCACCCAGAGGAGCGTGCGCAGGGCGATCCTCTTGTGCAGGTTCCAGCGCTCCCCCAGGAACAGCATGTaGGTGTCCTTCATGTACTGG +
Preference number: 3 (lower is better)
Translates to: PTQRSVRRAILLCRFQRSPRNSM*VSFMYW
Trigger: CCAGTACATGAAGGACACCAACATGCTGTTCCTGGG...GGAGCGCTGGAACCTGCACAAGAGGATCGCCCTGCGCACGCTCCTCTGGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575230.1
3UTR GCA 72 bp GCTCTGATTCCCACTCGCACTCCAGCAGTGGGAGGTTaGTCAAGACCAGGCATTCCGTCCCTGGCTGGGGTG +
Preference number: 3 (lower is better)
Translates to: ALIPTRTPAVGG*SRPGIPSLAGV
Trigger: CACCCCAGCCAGGGACGGAATGCCTGGTCTTGAGCAACCTCCCACTGCTGGAGTGCGAGTGGGAATCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR TCA 72 bp GCCACAGGAGGAGTTCCCAGAGGCTTCAGGAGGCTCTaGTTCCCACTCGCACTCCAGCAGTGGGAGGTTGCT +
Preference number: 3 (lower is better)
Translates to: ATGGVPRGFRRL*FPLALQQWEVA
Trigger: AGCAACCTCCCACTGCTGGAGTGCGAGTGGGAATCAGAGCCTCCTGAAGCCTCTGGGAACTCCTCCTGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CAA 90 bp ACAAACTGGAGCCACAGCCAGGCGAACAGCAGCATCACCAGCATGTTGGGAAAGCGCAGGGCGATCCTCTaGTGCAGGTTCCAGCGCTCC +
Preference number: 3 (lower is better)
Translates to: TNWSHSQANSSITSMLGKRRAIL*CRFQRS
Trigger: GGAGCGCTGGAACCTGCACAAGAGGATCGCCCTGCG...CTTTCCCAACATGCTGGTGATGCTGCTGTTCGCCTGGCTGTGGCTCCAGTTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572094.1
3UTR TCA 72 bp ATGCTTGAGGCAGAGCGGGTACAGCAGCCTGCATCCTaGTCCCTCGGCTACCTGGCCTCCCTCACAGAGATA +
Preference number: 3 (lower is better)
Translates to: MLEAERVQQPAS*SLGYLASLTEI
Trigger: TATCTCTGTGAGGGAGGCCAGGTAGCCGAGGGATCAGGATGCAGGCTGCTGTACCCGCTCTGCCTCAAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR TCA 72 bp CCCAGAGGGTGCCAGCCAAGGCGTCTCGGCAAATGTTaGCCCAGACAACAGGGGACCAAGGAGTTGAAGGAG +
Preference number: 3 (lower is better)
Translates to: PRGCQPRRLGKC*PRQQGTKELKE
Trigger: CTCCTTCAACTCCTTGGTCCCCTGTTGTCTGGGTCAACATTTGCCGAGACGCCTTGGCTGGCACCCTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR GCA 72 bp ACGAAGCGAGTGAAAACCAGAGCCCTGTGTGGGGGATaGTTGAGGCAGAGCGGGTACAGCAGCCTGCATCCT +
Preference number: 3 (lower is better)
Translates to: TKRVKTRALCGG*LRQSGYSSLHP
Trigger: AGGATGCAGGCTGCTGTACCCGCTCTGCCTCAAGCATCCCCCACACAGGGCTCTGGTTTTCACTCGCTTCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CAA 90 bp GCCATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTTGGGGATGGCAGGGGCTGTGTGGGGGATGCTaGAGGCAGAGCGGGTACAGC +
Preference number: 3 (lower is better)
Translates to: AITAHTWSVILAIWGWQGLCGGC*RQSGYS
Trigger: GCTGTACCCGCTCTGCCTCAAGCATCCCCCACACAG...CCCCTGCCATCCCCAAATAGCTAGGATCACACTCCAAGTATGGGCAGTGATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CAA 90 bp GCCCACGGGCAGGGGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAAGCGTCTCGGCAAATGTaGACCCAGACAACAGGGGAC +
Preference number: 3 (lower is better)
Translates to: AHGQGLFAERSPSAAQSQASRQM*TQTTGD
Trigger: GTCCCCTGTTGTCTGGGTCAACATTTGCCGAGACGC...TTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGCCCGTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR TCA 72 bp TGGCAAGGCTTGGGAAAGATGGGTCCAGCAGCCCACTaGGGGGTTCCCTTCATTTCTGAGCCTACCCTCCAG +
Preference number: 3 (lower is better)
Translates to: WQGLGKMGPAAH*GVPFISEPTLQ
Trigger: CTGGAGGGTAGGCTCAGAAATGAAGGGAACCCCTCAGTGGGCTGCTGGACCCATCTTTCCCAAGCCTTGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR CCA 72 bp CTACCTGGCCTCCCTCACAGAGATAATGGCAAGGCTTaGGAAAGATGGGTCCAGCAGCCCACTGAGGGGTTC +
Preference number: 3 (lower is better)
Translates to: LPGLPHRDNGKA*ERWVQQPTEGF
Trigger: GAACCCCTCAGTGGGCTGCTGGACCCATCTTTCCCAAGCCTTGCCATTATCTCTGTGAGGGAGGCCAGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR CCA 72 bp CAGTGGGAGGTTGCTCAAGACCAGGCATTCCGTCCCTaGCTGGGGTGTCCCTTCCAGAGTGACAGAGATGAT +
Preference number: 3 (lower is better)
Translates to: QWEVAQDQAFRP*LGCPFQSDRDD
Trigger: ATCATCTCTGTCACTCTGGAAGGGACACCCCAGCCAGGGACGGAATGCCTGGTCTTGAGCAACCTCCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR CCA 72 bp TGGTGTCCTTCATGTACTGGACACACACCTGGAGCGTaGCACGAAGGCCTCATCAGGACTGTCCCTTGCCAC +
Preference number: 3 (lower is better)
Translates to: WCPSCTGHTPGA*HEGLIRTVPCH
Trigger: GTGGCAAGGGACAGTCCTGATGAGGCCTTCGTGCCACGCTCCAGGTGTGTGTCCAGTACATGAAGGACACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575230.1
3UTR CCA 72 bp CCGCCCAGGAACAGCATGTTGGTGTCCTTCATGTACTaGACACACACCTGGAGCGTGGCACGAAGGCCTCAT +
Preference number: 3 (lower is better)
Translates to: PPRNSMLVSFMY*THTWSVARRPH
Trigger: ATGAGGCCTTCGTGCCACGCTCCAGGTGTGTGTCCAGTACATGAAGGACACCAACATGCTGTTCCTGGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575230.1
3UTR CCA 72 bp AGCATGTTGGTGTCCTTCATGTACTGGACACACACCTaGAGCGTGGCACGAAGGCCTCATCAGGACTGTCCC +
Preference number: 3 (lower is better)
Translates to: SMLVSFMYWTHT*SVARRPHQDCP
Trigger: GGGACAGTCCTGATGAGGCCTTCGTGCCACGCTCCAGGTGTGTGTCCAGTACATGAAGGACACCAACATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575230.1
3UTR-3UTR CAA 90 bp GAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTTGGGGATGGCAGCGTCTCGGCAAATGTaGACCCAGACAACAGGGGAC +
Preference number: 3 (lower is better)
Translates to: ERHHCPYLECDPSYLGMAASRQM*TQTTGD
Trigger: GTCCCCTGTTGTCTGGGTCAACATTTGCCGAGACGC...TGCCATCCCCAAATAGCTAGGATCACACTCCAAGTATGGGCAGTGATGGCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR TCA 72 bp TGTGGTGCACTGTGGGTGGCAAGCCAGGTGTCGTCCTaGAGTTGGCAACTCAGATTCCTCATCCTTTGGTGG +
Preference number: 3 (lower is better)
Translates to: CGALWVASQVSS*SWQLRFLILWW
Trigger: CCACCAAAGGATGAGGAATCTGAGTTGCCAACTTCAGGACGACACCTGGCTTGCCACCCACAGTGCACCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CAA 90 bp CCAGCCATGGCTGTGAAGGCCAGTCAACAAAGGGAAGATTTTACCCAGAGGAGCCCCATTGGCTGGGTTTaGGTGGTGTGTGGACATCGT +
Preference number: 3 (lower is better)
Translates to: PAMAVKASQQREDFTQRSPIGWV*VVCGHR
Trigger: ACGATGTCCACACACCACCAAAACCCAGCCAATGGG...GCTCCTCTGGGTAAAATCTTCCCTTTGTTGACTGGCCTTCACAGCCATGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CAA 90 bp AGGGAAGATTTTACCCAGAGGAGCTCAAACGCTGGCATGAAAGACTCTGAAGTGCTGTGTGGGGGATGCTaGAGGCAGAGCGGGTACAGC +
Preference number: 3 (lower is better)
Translates to: REDFTQRSSNAGMKDSEVLCGGC*RQSGYS
Trigger: GCTGTACCCGCTCTGCCTCAAGCATCCCCCACACAG...CACTTCAGAGTCTTTCATGCCAGCGTTTGAGCTCCTCTGGGTAAAATCTTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CAA 90 bp CAACGATCCTCTGTTGTCACCAGCCATGGCTGTGAAGGCCAGTCAACAAAGGGACAGATTCCTCATCCTTaGGTGGTGGCCACAGGAGGA +
Preference number: 3 (lower is better)
Translates to: QRSSVVTSHGCEGQSTKGQIPHP*VVATGG
Trigger: TCCTCCTGTGGCCACCACCAAAGGATGAGGAATCTG...TCCCTTTGTTGACTGGCCTTCACAGCCATGGCTGGTGACAACAGAGGATCGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR CCA 72 bp CGATTAAAACAGAACCAAGTGATGAAGGGCGTAGGTTaGCCTGTGGTGCACTGTGGGTGGCAAGCCAGGTGT +
Preference number: 3 (lower is better)
Translates to: RLKQNQVMKGVG*PVVHCGWQARC
Trigger: ACACCTGGCTTGCCACCCACAGTGCACCACAGGCCAACCTACGCCCTTCATCACTTGGTTCTGTTTTAATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR CCA 72 bp TCCGCGGGAGACAGAGCATTTAATGAGAGCAAGAGCTaGACAGTGTGGTCAGGAATCGTCCCACCCAAGGAA +
Preference number: 3 (lower is better)
Translates to: SAGDRAFNESKS*TVWSGIVPPKE
Trigger: TTCCTTGGGTGGGACGATTCCTGACCACACTGTCCAGCTCTTGCTCTCATTAAATGCTCTGTCTCCCGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433363.7
3UTR-3UTR CAA 90 bp GGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACGATCCTCTGTTGTCTCTGCATCTGGGCTaGGAGGAAGAGGTGGCCCAT +
Preference number: 3 (lower is better)
Translates to: GCLLRDHQALLNLNDPLLSLHLG*EEEVAH
Trigger: ATGGGCCACCTCTTCCTCCAAGCCCAGATGCAGAGA...CAACAGAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CAA 90 bp TGGGGTTTCCTGAGGCTCTCATACTTTCTCCTGCCCTGGAAAATGCCATCCAGGTGTGATCCTAGCTATTaGGGGATGGCAGGGGAAGCA +
Preference number: 3 (lower is better)
Translates to: WGFLRLSYFLLPWKMPSRCDPSY*GMAGEA
Trigger: TGCTTCCCCTGCCATCCCCAAATAGCTAGGATCACA...CCTGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CAA 90 bp CAACGATCCTCTGTTGTCACCAGCCATGGCTGTGAAGGCCAGTCAACAAAGGGATGTGATCCTAGCTATTaGGGGATGGCAGGGGAAGCA +
Preference number: 3 (lower is better)
Translates to: QRSSVVTSHGCEGQSTKGCDPSY*GMAGEA
Trigger: TGCTTCCCCTGCCATCCCCAAATAGCTAGGATCACA...TCCCTTTGTTGACTGGCCTTCACAGCCATGGCTGGTGACAACAGAGGATCGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR GCA 72 bp CTGCCCTGGAAAATGCCATCCAGGAGCTCATCTCTTTaGTACTGCCTCTCTTCCAGAGCAGCACAAGAAGGA +
Preference number: 3 (lower is better)
Translates to: LPWKMPSRSSSL*YCLSSRAAQEG
Trigger: TCCTTCTTGTGCTGCTCTGGAAGAGAGGCAGTAGCAAAGAGATGAGCTCCTGGATGGCATTTTCCAGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR CCA 72 bp GCCACAGCCAGGCGAACAGCAGCATCACCAGCATGTTaGGAAAGGCAAATGCAAACCAGGAAGCAAAGTTCA +
Preference number: 3 (lower is better)
Translates to: ATARRTAASPAC*ERQMQTRKQSS
Trigger: TGAACTTTGCTTCCTGGTTTGCATTTGCCTTTCCCAACATGCTGGTGATGCTGCTGTTCGCCTGGCTGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572094.1
3UTR-3UTR CAA 90 bp AAGACTCTGAAGTGGCATAGCCAGTGGAAATTAACAGCTGTGTCCACTCTGGGCCAGATTCCTCATCCTTaGGTGGTGGCCACAGGAGGA +
Preference number: 3 (lower is better)
Translates to: KTLKWHSQWKLTAVSTLGQIPHP*VVATGG
Trigger: TCCTCCTGTGGCCACCACCAAAGGATGAGGAATCTG...GCCCAGAGTGGACACAGCTGTTAATTTCCACTGGCTATGCCACTTCAGAGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR TCA 72 bp GAACCAGACACATACTCGGTCCTTGATGGGGTTTCCTaGGGCTCTCATACTTTCTCCTGCCCTGGAAAATGC +
Preference number: 3 (lower is better)
Translates to: EPDTYSVLDGVS*GSHTFSCPGKC
Trigger: GCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAACCCCATCAAGGACCGAGTATGTGTCTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR CCA 72 bp TGGGGTTTCCTGAGGCTCTCATACTTTCTCCTGCCCTaGAAAATGCCATCCAGGAGCTCATCTCTTTGCTAC +
Preference number: 3 (lower is better)
Translates to: WGFLRLSYFLLP*KMPSRSSSLCY
Trigger: GTAGCAAAGAGATGAGCTCCTGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR CCA 72 bp GACAGAGCATTTAATGAGAGCAAGAGCTGGACAGTGTaGTCAGGAATCGTCCCACCCAAGGAACCAGACACA +
Preference number: 3 (lower is better)
Translates to: DRAFNESKSWTV*SGIVPPKEPDT
Trigger: TGTGTCTGGTTCCTTGGGTGGGACGATTCCTGACCACACTGTCCAGCTCTTGCTCTCATTAAATGCTCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CAA 90 bp GGAAATAAAATGGACTTGCGGGGGAAAGAAGATGCTTGTCTCTCATGTCTGTCTTCTCTGCATCTGGGCTaGGAGGAAGAGGTGGCCCAT +
Preference number: 3 (lower is better)
Translates to: GNKMDLRGKEDACLSCLSSLHLG*EEEVAH
Trigger: ATGGGCCACCTCTTCCTCCAAGCCCAGATGCAGAGA...AGACAGACATGAGAGACAAGCATCTTCTTTCCCCCGCAAGTCCATTTTATTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CAA 90 bp TTTCCTGAGGCTCTCATACTTTCTCCTGCCCTGGAAAATGCCATCCAGGAGCTCCATCACTGCCCATACTaGGAGTGTGATCCTAGCTAT +
Preference number: 3 (lower is better)
Translates to: FPEALILSPALENAIQELHHCPY*ECDPSY
Trigger: ATAGCTAGGATCACACTCCAAGTATGGGCAGTGATG...GAGCTCCTGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR GCA 72 bp CAAATGCAAACCAGGAAGCAAAGTTCACGAGGTCCTTaGTGTCAGGAAACAACTCGTTCATCTGGCCCAGGA +
Preference number: 3 (lower is better)
Translates to: QMQTRKQSSRGP*CQETTRSSGPG
Trigger: TCCTGGGCCAGATGAACGAGTTGTTTCCTGACAGCAAGGACCTCGTGAACTTTGCTTCCTGGTTTGCATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572094.1
3UTR GCA 72 bp GAACAGCAGCATCACCAGCATGTTGGGAAAGGCAAATaGAAACCAGGAAGCAAAGTTCACGAGGTCCTTGCT +
Preference number: 3 (lower is better)
Translates to: EQQHHQHVGKGK*KPGSKVHEVLA
Trigger: AGCAAGGACCTCGTGAACTTTGCTTCCTGGTTTGCATTTGCCTTTCCCAACATGCTGGTGATGCTGCTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572094.1
3UTR CCA 72 bp ATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTTaGGGATGGCAGGGGAAGCATCTCCCAGAAAAGATG +
Preference number: 3 (lower is better)
Translates to: ITAHTWSVILAI*GWQGKHLPEKM
Trigger: CATCTTTTCTGGGAGATGCTTCCCCTGCCATCCCCAAATAGCTAGGATCACACTCCAAGTATGGGCAGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR-3UTR CAA 90 bp GCAGCATCACCAGCATGTTGGGAAAGGCAAATGCAAACCAGGAAGCAAAGTTCAGCCTTCAAAAATCACTaGACTCCCTGGCAGCTCCTT +
Preference number: 3 (lower is better)
Translates to: AASPACWERQMQTRKQSSAFKNH*TPWQLL
Trigger: AAGGAGCTGCCAGGGAGTCAAGTGATTTTTGAAGGC...TGAACTTTGCTTCCTGGTTTGCATTTGCCTTTCCCAACATGCTGGTGATGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572094.1
3UTR TCA 72 bp GGGAAGATTTTACCCAGAGGAGCTCAAACGCTGGCATaGAAGACTCTGAAGTGGCATAGCCAGTGGAAATTA +
Preference number: 3 (lower is better)
Translates to: GKILPRGAQTLA*KTLKWHSQWKL
Trigger: TAATTTCCACTGGCTATGCCACTTCAGAGTCTTTCATGCCAGCGTTTGAGCTCCTCTGGGTAAAATCTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR GCA 72 bp TGGAAAATGCCATCCAGGAGCTCATCTCTTTGCTACTaGCTCTCTTCCAGAGCAGCACAAGAAGGAAATAAA +
Preference number: 3 (lower is better)
Translates to: WKMPSRSSSLCY*LSSRAAQEGNK
Trigger: TTTATTTCCTTCTTGTGCTGCTCTGGAAGAGAGGCAGTAGCAAAGAGATGAGCTCCTGGATGGCATTTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR TCA 72 bp ACAGGTCTGGATGTTCCGTGGCATTCCCAAGTCACATaGCATCGTTTTGAAACTCTGTCATTCATAAATGGG +
Preference number: 3 (lower is better)
Translates to: TGLDVPWHSQVT*HRFETLSFING
Trigger: CCCATTTATGAATGACAGAGTTTCAAAACGATGTCATGTGACTTGGGAATGCCACGGAACATCCAGACCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570687.1
3UTR TCA 72 bp TGTTCCGTGGCATTCCCAAGTCACATGACATCGTTTTaGAACTCTGTCATTCATAAATGGGGCATCCCTTAT +
Preference number: 3 (lower is better)
Translates to: CSVAFPSHMTSF*NSVIHKWGIPY
Trigger: ATAAGGGATGCCCCATTTATGAATGACAGAGTTTCAAAACGATGTCATGTGACTTGGGAATGCCACGGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570687.1
CDS-3UTR GCA 90 bp AGCCCAGCATCAGCCGTGCAGGCTTGGCCCCCACCCAGAGGAGCGTGCGCAGGGGCCGGCCTCGGTGGCTaGGCTTGTGGCTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: SPASAVQAWPPPRGACAGAGLGG*ACGFHL
Trigger: CAGATGGAAGCCACAAGCGCAGCCACCGAGGCCGGC...CCCTGCGCACGCTCCTCTGGGTGGGGGCCAAGCCTGCACGGCTGATGCTGGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR GCA 90 bp AGCCCAGCATCAGCCGTGCAGGCTTGGCCCCCACCCAGAGGAGCGTGCGCAGGGCCACCCAGAGGAGCGTaGGCAGGGCGATCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: SPASAVQAWPPPRGACAGPPRGA*AGRSSC
Trigger: ACAAGAGGATCGCCCTGCGCACGCTCCTCTGGGTGG...CCCTGCGCACGCTCCTCTGGGTGGGGGCCAAGCCTGCACGGCTGATGCTGGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572094.1
ENST00000575230.1
CDS-3UTR TCA 90 bp AGGCAGAGCGGGTACAGCAGCCTGCATCCTGATCCCTCGGCTACCTGGCCTCCCCAGCCACGGCCACGATaGGGCCGCCCAGGAACAGCA +
Preference number: 4 (lower is better)
Translates to: RQSGYSSLHPDPSATWPPQPRPR*GRPGTA
Trigger: TGCTGTTCCTGGGCGGCCTCATCGTGGCCGTGGCTG...GGGAGGCCAGGTAGCCGAGGGATCAGGATGCAGGCTGCTGTACCCGCTCTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR CAA 72 bp GGAAACAACTCGTTCATCTGGCCCAGGAGCACCACGTaGGGTCCCGTCCCGGTCAGGGTGGCGGTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: GNNSFIWPRSTT*GPVPVRVAVPP
Trigger: CGGGGGCACCGCCACCCTGACCGGGACGGGACCCAACGTGGTGCTCCTGGGCCAGATGAACGAGTTGTTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR GCA 90 bp TTCCAGCGCTCCACAGCCACGGCCACGATGAGGCCGCCCAGGAACAGCATGTTGGCCCAGCATCAGCCGTaGAGGCTTGGCCCCCACCCA +
Preference number: 4 (lower is better)
Translates to: FQRSTATATMRPPRNSMLAQHQP*RLGPHP
Trigger: TGGGTGGGGGCCAAGCCTGCACGGCTGATGCTGGGC...CAACATGCTGTTCCTGGGCGGCCTCATCGTGGCCGTGGCTGTGGAGCGCTGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572094.1
ENST00000575230.1
CDS-3UTR TCA 90 bp GCCCCCACCCAGAGGAGCGTGCGCAGGGCGATCCTCTTGTGCAGGTTCCAGCGCCCAGTCCCCAGATGCTaGCTTCAGGGACAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: APTQRSVRRAILLCRFQRPVPRC*LQGQLG
Trigger: TCCAAGCTGTCCCTGAAGTCAGCATCTGGGGACTGG...GCGCTGGAACCTGCACAAGAGGATCGCCCTGCGCACGCTCCTCTGGGTGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575230.1
CDS-3UTR GCA 90 bp GGCTTGGCCCCCACCCAGAGGAGCGTGCGCAGGGCGATCCTCTTGTGCAGGTTCTTCCGGTACTCCTCCTaGAGCACCTTGAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GLAPTQRSVRRAILLCRFFRYSS*STLRAA
Trigger: GGCTGCCCTCAAGGTGCTGCAGGAGGAGTACCGGAA...GAACCTGCACAAGAGGATCGCCCTGCGCACGCTCCTCTGGGTGGGGGCCAAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR CCA 90 bp CGGCCTCGGTGGCTGCGCTTGTGGCTTCCATCTGCTGCAATATGGCCTCCACGACCAGGAGCACCACGTTaGGTCCCGTCCCGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: RPRWLRLWLPSAAIWPPRPGAPR*VPSRSG
Trigger: CCCTGACCGGGACGGGACCCAACGTGGTGCTCCTGG...TCGTGGAGGCCATATTGCAGCAGATGGAAGCCACAAGCGCAGCCACCGAGGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR CCA 90 bp CCGTGCAGGCTTGGCCCCCACCCAGAGGAGCGTGCGCAGGGCGATCCTCTTGTGTACTGGACACACACCTaGAGCGTGGCACGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: PCRLGPHPEERAQGDPLVYWTHT*SVARRP
Trigger: AGGCCTTCGTGCCACGCTCCAGGTGTGTGTCCAGTA...CACAAGAGGATCGCCCTGCGCACGCTCCTCTGGGTGGGGGCCAAGCCTGCACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575230.1
CDS-3UTR TCA 90 bp CCCACCCAGAGGAGCGTGCGCAGGGCGATCCTCTTGTGCAGGTTCCAGCGCTCCCCTCCTGCAGCACCTTaGGGGCAGCCTTCTCGTTTT +
Preference number: 4 (lower is better)
Translates to: PTQRSVRRAILLCRFQRSPPAAP*GQPSRF
Trigger: AAAACGAGAAGGCTGCCCTCAAGGTGCTGCAGGAGG...GGAGCGCTGGAACCTGCACAAGAGGATCGCCCTGCGCACGCTCCTCTGGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR GCA 90 bp AGCCCACTGTGGCCCCCAGAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTTGGCGGTGCCCCCGATaGTGGCCGCGTAGCAGATGC +
Preference number: 4 (lower is better)
Translates to: SPLWPPERHHCPYLECDPWRCPR*WPRSRC
Trigger: GCATCTGCTACGCGGCCAGCATCGGGGGCACCGCCA...AGGATCACACTCCAAGTATGGGCAGTGATGGCGCTCTGGGGGCCACAGTGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp CGTGCAGGCTTGGCCCCCACCCAGAGGAGCGTGCGCAGGGCGATCCTCTTGTGCCCTTCTCGTTTTTCTTaGTCTCTAGCCCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: RAGLAPTQRSVRRAILLCPSRFS*SLARSP
Trigger: GGGGCTGCGGGCTAGAGAGCAAGAAAAACGAGAAGG...GCACAAGAGGATCGCCCTGCGCACGCTCCTCTGGGTGGGGGCCAAGCCTGCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR GCA 90 bp AGGCAGAGCGGGTACAGCAGCCTGCATCCTGATCCCTCGGCTACCTGGCCTCCCTTCCGGTACTCCTCCTaGAGCACCTTGAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RQSGYSSLHPDPSATWPPFRYSS*STLRAA
Trigger: GGCTGCCCTCAAGGTGCTGCAGGAGGAGTACCGGAA...GGGAGGCCAGGTAGCCGAGGGATCAGGATGCAGGCTGCTGTACCCGCTCTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp ACCCAGACAACAGGGGACCAAGGAGTTGAAGGAGGCTCACTGGAGAGGTGGGACGGGGACCCCAGAGGGTaGCAGCCAAGGCGTCTCGGC +
Preference number: 4 (lower is better)
Translates to: TQTTGDQGVEGGSLERWDGDPRG*QPRRLG
Trigger: GCCGAGACGCCTTGGCTGGCACCCTCTGGGGTCCCC...GTCCCACCTCTCCAGTGAGCCTCCTTCAACTCCTTGGTCCCCTGTTGTCTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp CATCAGCCGTGCAGGCTTGGCCCCCACCCAGAGGAGCGTGCGCAGGGCGATCCTCCATCTGCTGCAATATaGCCTCCACGATGGGCACCA +
Preference number: 4 (lower is better)
Translates to: HQPCRLGPHPEERAQGDPPSAAI*PPRWAP
Trigger: TGGTGCCCATCGTGGAGGCCATATTGCAGCAGATGG...AGGATCGCCCTGCGCACGCTCCTCTGGGTGGGGGCCAAGCCTGCACGGCTGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR CCA 90 bp AGCCCACTGTGGCCCCCAGAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTCCAGGAGCACCACGTTaGGTCCCGTCCCGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: SPLWPPERHHCPYLECDPPGAPR*VPSRSG
Trigger: CCCTGACCGGGACGGGACCCAACGTGGTGCTCCTGG...AGGATCACACTCCAAGTATGGGCAGTGATGGCGCTCTGGGGGCCACAGTGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp AGGCAGAGCGGGTACAGCAGCCTGCATCCTGATCCCTCGGCTACCTGGCCTCCCCCTCCTGCAGCACCTTaGGGGCAGCCTTCTCGTTTT +
Preference number: 4 (lower is better)
Translates to: RQSGYSSLHPDPSATWPPPPAAP*GQPSRF
Trigger: AAAACGAGAAGGCTGCCCTCAAGGTGCTGCAGGAGG...GGGAGGCCAGGTAGCCGAGGGATCAGGATGCAGGCTGCTGTACCCGCTCTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp CATCAGCCGTGCAGGCTTGGCCCCCACCCAGAGGAGCGTGCGCAGGGCGATCCTGTGGCTTCCATCTGCTaGAATATGGCCTCCACGATG +
Preference number: 4 (lower is better)
Translates to: HQPCRLGPHPEERAQGDPVASIC*NMASTM
Trigger: CATCGTGGAGGCCATATTGCAGCAGATGGAAGCCAC...AGGATCGCCCTGCGCACGCTCCTCTGGGTGGGGGCCAAGCCTGCACGGCTGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR GCA 90 bp AGGCAGAGCGGGTACAGCAGCCTGCATCCTGATCCCTCGGCTACCTGGCCTCCCTGCAAGGGCTCCATCTaGTTCCCCATCCACACGGAC +
Preference number: 4 (lower is better)
Translates to: RQSGYSSLHPDPSATWPPCKGSI*FPIHTD
Trigger: GTCCGTGTGGATGGGGAAGCAGATGGAGCCCTTGCA...GGGAGGCCAGGTAGCCGAGGGATCAGGATGCAGGCTGCTGTACCCGCTCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp AAGACCAGGCATTCCGTCCCTGGCTGGGGTGTCCCTTCCAGAGTGACAGAGATGGGCTGCCGGGGGCACTaGGTGCAAGGGCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: KTRHSVPGWGVPSRVTEMGCRGH*VQGLHL
Trigger: CAGATGGAGCCCTTGCACGCAGTGCCCCCGGCAGCC...CATCTCTGTCACTCTGGAAGGGACACCCCAGCCAGGGACGGAATGCCTGGTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp CTGATCCCTCGGCTACCTGGCCTCCCTCACAGAGATAATGGCAAGGCTTGGGAAGGGGACCCCAGAGGGTaGCAGCCAAGGCGTCTCGGC +
Preference number: 4 (lower is better)
Translates to: LIPRLPGLPHRDNGKAWEGDPRG*QPRRLG
Trigger: GCCGAGACGCCTTGGCTGGCACCCTCTGGGGTCCCC...TTCCCAAGCCTTGCCATTATCTCTGTGAGGGAGGCCAGGTAGCCGAGGGATCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp CGCTCCACAGCCACGGCCACGATGAGGCCGCCCAGGAACAGCATGTTGGTGTCCCATCAGAATGACGAGTaGCAGCAGCAGGAGCGGGGT +
Preference number: 4 (lower is better)
Translates to: RSTATATMRPPRNSMLVSHQNDE*QQQERG
Trigger: ACCCCGCTCCTGCTGCTGCCACTCGTCATTCTGATG...GGACACCAACATGCTGTTCCTGGGCGGCCTCATCGTGGCCGTGGCTGTGGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572094.1
ENST00000575230.1
CDS-3UTR CCA 90 bp ACCCAGACAACAGGGGACCAAGGAGTTGAAGGAGGCTCACTGGAGAGGTGGGACCCAGGCCGGCCTCGGTaGCTGCGCTTGTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: TQTTGDQGVEGGSLERWDPGRPR*LRLWLP
Trigger: TGGAAGCCACAAGCGCAGCCACCGAGGCCGGCCTGG...GTCCCACCTCTCCAGTGAGCCTCCTTCAACTCCTTGGTCCCCTGTTGTCTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GCCCCCACCCAGAGGAGCGTGCGCAGGGCGATCCTCTTGTGCAGGTTCCAGCGCTGGTGTCTCCCTGCCTaGAGTCCAGAATCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: APTQRSVRRAILLCRFQRWCLPA*SPESGR
Trigger: TCTTCCAGATTCTGGACTCCAGGCAGGGAGACACCA...GCGCTGGAACCTGCACAAGAGGATCGCCCTGCGCACGCTCCTCTGGGTGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575230.1
CDS-3UTR TCA 90 bp GTGTCCTTCATGTACTGGACACACACCTGGAGCGTGGCACGAAGGCCTCATCAGCAGCCACGGCCACGATaGGGCCGCCCAGGAACAGCA +
Preference number: 4 (lower is better)
Translates to: VSFMYWTHTWSVARRPHQQPRPR*GRPGTA
Trigger: TGCTGTTCCTGGGCGGCCTCATCGTGGCCGTGGCTG...CTGATGAGGCCTTCGTGCCACGCTCCAGGTGTGTGTCCAGTACATGAAGGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575230.1
CDS-3UTR CCA 90 bp GATCTCCGCGAAGGACAAGGGCCCCAGCTTCCGGTACTCCTCCTGCAGCACCTTTCCCTGGCAGCTCCTTaGCCTTGCCCTTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: DLREGQGPQLPVLLLQHLSLAAP*PCPCPP
Trigger: TGGTGGACAAGGGCAAGGCCAAGGAGCTGCCAGGGA...AAGGTGCTGCAGGAGGAGTACCGGAAGCTGGGGCCCTTGTCCTTCGCGGAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR CCA 90 bp CGTGCAGGCTTGGCCCCCACCCAGAGGAGCGTGCGCAGGGCGATCCTCTTGTGCAGATGCACAGGGTCATaGCCTTACACAACCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RAGLAPTQRSVRRAILLCRCTGS*PYTTSS
Trigger: GGAAGAGGTTGTGTAAGGCCATGACCCTGTGCATCT...GCACAAGAGGATCGCCCTGCGCACGCTCCTCTGGGTGGGGGCCAAGCCTGCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR CCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGGCGCGGGAGGGAGACTaGCGGGCGAGACGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVAREGD*RARRVR
Trigger: CCTCACTCGTCTCGCCCGCCAGTCTCCCTCCCGCGC...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573648.5
CDS-3UTR TCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGCAGCCACGGCCACGATaGGGCCGCCCAGGAACAGCA +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVQPRPR*GRPGTA
Trigger: TGCTGTTCCTGGGCGGCCTCATCGTGGCCGTGGCTG...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR TCA 90 bp ACAAACTGGAGCCACAGCCAGGCGAACAGCAGCATCACCAGCATGTTGGGAAAGCAGCCACGGCCACGATaGGGCCGCCCAGGAACAGCA +
Preference number: 4 (lower is better)
Translates to: TNWSHSQANSSITSMLGKQPRPR*GRPGTA
Trigger: TGCTGTTCCTGGGCGGCCTCATCGTGGCCGTGGCTG...CTTTCCCAACATGCTGGTGATGCTGCTGTTCGCCTGGCTGTGGCTCCAGTTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR TCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGTCAGCCAGCCGGGCATaGAGCCGGGGTCTCGGGAGA +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVSASRA*SRGLGR
Trigger: TCTCCCGAGACCCCGGCTTCATGCCCGGCTGGCTGA...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR TCA 90 bp GAAGGGACATGGGCACTGGTAGGTGGTTGTCTTAGCTCTCAACCAGGGGATCCGCAGCAGCCTGCATCCTaGTCCCTCGGCTACCTGGCC +
Preference number: 4 (lower is better)
Translates to: EGTWALVGGCLSSQPGDPQQPAS*SLGYLA
Trigger: GGCCAGGTAGCCGAGGGATCAGGATGCAGGCTGCTG...CGGATCCCCTGGTTGAGAGCTAAGACAACCACCTACCAGTGCCCATGTCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp AGCCCACTGTGGCCCCCAGAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTTGTGTGGGGGATGCTTaGGGCAGAGCGGGTACAGCA +
Preference number: 4 (lower is better)
Translates to: SPLWPPERHHCPYLECDPCVGDA*GRAGTA
Trigger: TGCTGTACCCGCTCTGCCTCAAGCATCCCCCACACA...AGGATCACACTCCAAGTATGGGCAGTGATGGCGCTCTGGGGGCCACAGTGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp AGGCAGAGCGGGTACAGCAGCCTGCATCCTGATCCCTCGGCTACCTGGCCTCCCCTTGTGGCTTCCATCTaGTGCAATATGGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: RQSGYSSLHPDPSATWPPLVASI*CNMAST
Trigger: CGTGGAGGCCATATTGCAGCAGATGGAAGCCACAAG...GGGAGGCCAGGTAGCCGAGGGATCAGGATGCAGGCTGCTGTACCCGCTCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp ACCCAGACAACAGGGGACCAAGGAGTTGAAGGAGGCTCACTGGAGAGGTGGGACCGCTCTTGGTCTTCCTaGTGCCCCAGAGTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: TQTTGDQGVEGGSLERWDRSWSS*CPRVGP
Trigger: AGGCCCCACTCTGGGGCAGCAGGAAGACCAAGAGCG...GTCCCACCTCTCCAGTGAGCCTCCTTCAACTCCTTGGTCCCCTGTTGTCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp AGCCGTGCAGGCTTGGCCCCCACCCAGAGGAGCGTGCGCAGGGCGATCCTCTTGAGTTCACGAGGTCCTTaGTGTCAGGAAACAACTCGT +
Preference number: 4 (lower is better)
Translates to: SRAGLAPTQRSVRRAILLSSRGP*CQETTR
Trigger: ACGAGTTGTTTCCTGACAGCAAGGACCTCGTGAACT...CAAGAGGATCGCCCTGCGCACGCTCCTCTGGGTGGGGGCCAAGCCTGCACGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR GCA 90 bp CTGATCCCTCGGCTACCTGGCCTCCCTCACAGAGATAATGGCAAGGCTTGGGAAGCCGGGGGCACTGCGTaGAAGGGCTCCATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LIPRLPGLPHRDNGKAWEAGGTA*KGSICF
Trigger: GAAGCAGATGGAGCCCTTGCACGCAGTGCCCCCGGC...TTCCCAAGCCTTGCCATTATCTCTGTGAGGGAGGCCAGGTAGCCGAGGGATCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGGGCTGCCGGGGGCACTaGGTGCAAGGGCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVGCRGH*VQGLHL
Trigger: CAGATGGAGCCCTTGCACGCAGTGCCCCCGGCAGCC...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR GCA 90 bp GTGGCCCATTGGCTGGGTTTTGGTGGTGTGTGGACATCGTTGGGTCATTTTGGGGGCTGCCGGGGGCACTaGGTGCAAGGGCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: VAHWLGFGGVWTSLGHFGGCRGH*VQGLHL
Trigger: CAGATGGAGCCCTTGCACGCAGTGCCCCCGGCAGCC...CCCAAAATGACCCAACGATGTCCACACACCACCAAAACCCAGCCAATGGGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGGCCCAGCATCAGCCGTaGAGGCTTGGCCCCCACCCA +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVAQHQP*RLGPHP
Trigger: TGGGTGGGGGCCAAGCCTGCACGGCTGATGCTGGGC...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR GCA 90 bp CAGCATGTTGGTGTCCTTCATGTACTGGACACACACCTGGAGCGTGGCACGAAGGCCCAGCATCAGCCGTaGAGGCTTGGCCCCCACCCA +
Preference number: 4 (lower is better)
Translates to: QHVGVLHVLDTHLERGTKAQHQP*RLGPHP
Trigger: TGGGTGGGGGCCAAGCCTGCACGGCTGATGCTGGGC...CTTCGTGCCACGCTCCAGGTGTGTGTCCAGTACATGAAGGACACCAACATGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575230.1
CDS-3UTR CCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGCCAGGCCGGCCTCGGTaGCTGCGCTTGTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVPGRPR*LRLWLP
Trigger: TGGAAGCCACAAGCGCAGCCACCGAGGCCGGCCTGG...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CCA 90 bp TGTGGCCCCCAGAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTCCAGGAGCACCACGTTaGGTCCCGTCCCGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: CGPQSAITAHTWSVILAIPGAPR*VPSRSG
Trigger: CCCTGACCGGGACGGGACCCAACGTGGTGCTCCTGG...AATAGCTAGGATCACACTCCAAGTATGGGCAGTGATGGCGCTCTGGGGGCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGCCAGGAGCACCACGTTaGGTCCCGTCCCGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVPGAPR*VPSRSG
Trigger: CCCTGACCGGGACGGGACCCAACGTGGTGCTCCTGG...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CCA 90 bp AAGACCAGGCATTCCGTCCCTGGCTGGGGTGTCCCTTCCAGAGTGACAGAGATGGCCTGTGGTGCACTGTaGGTGGCAAGCCAGGTGTCG +
Preference number: 4 (lower is better)
Translates to: KTRHSVPGWGVPSRVTEMACGAL*VASQVS
Trigger: CGACACCTGGCTTGCCACCCACAGTGCACCACAGGC...CATCTCTGTCACTCTGGAAGGGACACCCCAGCCAGGGACGGAATGCCTGGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp TTCCGTCCCTGGCTGGGGTGTCCCTTCCAGAGTGACAGAGATGATCTGAGGCTGGCCTGTGGTGCACTGTaGGTGGCAAGCCAGGTGTCG +
Preference number: 4 (lower is better)
Translates to: FRPWLGCPFQSDRDDLRLACGAL*VASQVS
Trigger: CGACACCTGGCTTGCCACCCACAGTGCACCACAGGC...CAGCCTCAGATCATCTCTGTCACTCTGGAAGGGACACCCCAGCCAGGGACGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGTCAGCCGTGCAGGCTTaGCCCCCACCCAGAGGAGCG +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVSAVQA*PPPRGA
Trigger: CGCTCCTCTGGGTGGGGGCCAAGCCTGCACGGCTGA...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CCA 90 bp AGCATGTTGGTGTCCTTCATGTACTGGACACACACCTGGAGCGTGGCACGAAGGTCAGCCGTGCAGGCTTaGCCCCCACCCAGAGGAGCG +
Preference number: 4 (lower is better)
Translates to: SMLVSFMYWTHTWSVARRSAVQA*PPPRGA
Trigger: CGCTCCTCTGGGTGGGGGCCAAGCCTGCACGGCTGA...CCTTCGTGCCACGCTCCAGGTGTGTGTCCAGTACATGAAGGACACCAACATGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575230.1
3UTR CAA 72 bp TGGAGCGTGGCACGAAGGCCTCATCAGGACTGTCCCTaGCCACACACTAGAGCCACCCAGTCCCCAGATGCT +
Preference number: 4 (lower is better)
Translates to: WSVARRPHQDCP*PHTRATQSPDA
Trigger: AGCATCTGGGGACTGGGTGGCTCTAGTGTGTGGCAAGGGACAGTCCTGATGAGGCCTTCGTGCCACGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575230.1
CDS-3UTR TCA 90 bp TGCCATCCAGGAGCTCATCTCTTTGCTACTGCCTCTCTTCCAGAGCAGCACAAGCAGCCACGGCCACGATaGGGCCGCCCAGGAACAGCA +
Preference number: 4 (lower is better)
Translates to: CHPGAHLFATASLPEQHKQPRPR*GRPGTA
Trigger: TGCTGTTCCTGGGCGGCCTCATCGTGGCCGTGGCTG...CTTGTGCTGCTCTGGAAGAGAGGCAGTAGCAAAGAGATGAGCTCCTGGATGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGCAGCCACGGCCACGATaGGGCCGCCCAGGAACAGCA +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRQPRPR*GRPGTA
Trigger: TGCTGTTCCTGGGCGGCCTCATCGTGGCCGTGGCTG...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR TCA 90 bp AGCCCACTGTGGCCCCCAGAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTCCTCCTGCAGCACCTTaGGGGCAGCCTTCTCGTTTT +
Preference number: 4 (lower is better)
Translates to: SPLWPPERHHCPYLECDPPPAAP*GQPSRF
Trigger: AAAACGAGAAGGCTGCCCTCAAGGTGCTGCAGGAGG...AGGATCACACTCCAAGTATGGGCAGTGATGGCGCTCTGGGGGCCACAGTGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGTCAGCCAGCCGGGCATaGAGCCGGGGTCTCGGGAGA +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRSASRA*SRGLGR
Trigger: TCTCCCGAGACCCCGGCTTCATGCCCGGCTGGCTGA...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR TCA 90 bp AGGCAGAGCGGGTACAGCAGCCTGCATCCTGATCCCTCGGCTACCTGGCCTCCCGCCCAGTCAGGGAAATaGTCCAAGTCAAATATGGCC +
Preference number: 4 (lower is better)
Translates to: RQSGYSSLHPDPSATWPPAQSGK*SKSNMA
Trigger: GGCCATATTTGACTTGGATCATTTCCCTGACTGGGC...GGGAGGCCAGGTAGCCGAGGGATCAGGATGCAGGCTGCTGTACCCGCTCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp AGCCCACTGTGGCCCCCAGAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTAGGGCGATCCTCTTGTaGAGGTTCCAGCGCTCCACA +
Preference number: 4 (lower is better)
Translates to: SPLWPPERHHCPYLECDPRAILL*RFQRST
Trigger: TGTGGAGCGCTGGAACCTGCACAAGAGGATCGCCCT...AGGATCACACTCCAAGTATGGGCAGTGATGGCGCTCTGGGGGCCACAGTGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGTGGCGGTGCCCCCGATaGTGGCCGCGTAGCAGATGC +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRWRCPR*WPRSRC
Trigger: GCATCTGCTACGCGGCCAGCATCGGGGGCACCGCCA...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR GCA 90 bp GTGGCCCATTGGCTGGGTTTTGGTGGTGTGTGGACATCGTTGGGTCATTTTGGGGCCGGGGGCACTGCGTaGAAGGGCTCCATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: VAHWLGFGGVWTSLGHFGAGGTA*KGSICF
Trigger: GAAGCAGATGGAGCCCTTGCACGCAGTGCCCCCGGC...CCCAAAATGACCCAACGATGTCCACACACCACCAAAACCCAGCCAATGGGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGCCCAGCATCAGCCGTaGAGGCTTGGCCCCCACCCA +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRAQHQP*RLGPHP
Trigger: TGGGTGGGGGCCAAGCCTGCACGGCTGATGCTGGGC...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CCA 90 bp CCCACCCAGAGGAGCGTGCGCAGGGCGATCCTCTTGTGCAGGTTCCAGCGCTCCCCAGGAACAGCATGTTaGTGTCCTTCATGTACTGGA +
Preference number: 4 (lower is better)
Translates to: PTQRSVRRAILLCRFQRSPGTAC*CPSCTG
Trigger: TCCAGTACATGAAGGACACCAACATGCTGTTCCTGG...GGAGCGCTGGAACCTGCACAAGAGGATCGCCCTGCGCACGCTCCTCTGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572094.1
ENST00000575230.1
CDS-3UTR CCA 90 bp ATCTCCGCGAAGGACAAGGGCCCCAGCTTCCGGTACTCCTCCTGCAGCACCTTGCGGTGGCTGCGCTTGTaGCTTCCATCTGCTGCAATA +
Preference number: 4 (lower is better)
Translates to: ISAKDKGPSFRYSSCSTLRWLRL*LPSAAI
Trigger: TATTGCAGCAGATGGAAGCCACAAGCGCAGCCACCG...CAAGGTGCTGCAGGAGGAGTACCGGAAGCTGGGGCCCTTGTCCTTCGCGGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR CCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGCCAGGCCGGCCTCGGTaGCTGCGCTTGTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRPGRPR*LRLWLP
Trigger: TGGAAGCCACAAGCGCAGCCACCGAGGCCGGCCTGG...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CCA 90 bp GAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTTGGGGATGGCACCAGGCCGGCCTCGGTaGCTGCGCTTGTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: ERHHCPYLECDPSYLGMAPGRPR*LRLWLP
Trigger: TGGAAGCCACAAGCGCAGCCACCGAGGCCGGCCTGG...TGCCATCCCCAAATAGCTAGGATCACACTCCAAGTATGGGCAGTGATGGCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGCCAGGAGCACCACGTTaGGTCCCGTCCCGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRPGAPR*VPSRSG
Trigger: CCCTGACCGGGACGGGACCCAACGTGGTGCTCCTGG...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CCA 90 bp CCCACCCAGAGGAGCGTGCGCAGGGCGATCCTCTTGTGCAGGTTCCAGCGCTCCGCATCACCAGCATGTTaGGAAAGGCAAATGCAAACC +
Preference number: 4 (lower is better)
Translates to: PTQRSVRRAILLCRFQRSASPAC*ERQMQT
Trigger: GGTTTGCATTTGCCTTTCCCAACATGCTGGTGATGC...GGAGCGCTGGAACCTGCACAAGAGGATCGCCCTGCGCACGCTCCTCTGGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR CCA 90 bp GAAGGGACATGGGCACTGGTAGGTGGTTGTCTTAGCTCTCAACCAGGGGATCCGCAGGCATTCCGTCCCTaGCTGGGGTGTCCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: EGTWALVGGCLSSQPGDPQAFRP*LGCPFQ
Trigger: CTGGAAGGGACACCCCAGCCAGGGACGGAATGCCTG...CGGATCCCCTGGTTGAGAGCTAAGACAACCACCTACCAGTGCCCATGTCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp AGTAGATTGGCCCACGGGCAGGGGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAGCTGTGTCCACTCTaGGCCTCAGGTGAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: SRLAHGQGLFAERSPSAAQLCPL*ASGEGG
Trigger: CCCTCCCTCACCTGAGGCCCAGAGTGGACACAGCTG...AGCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGCCCGTGGGCCAATCTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGTCAGCCGTGCAGGCTTaGCCCCCACCCAGAGGAGCG +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRSAVQA*PPPRGA
Trigger: CGCTCCTCTGGGTGGGGGCCAAGCCTGCACGGCTGA...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
3UTR CAA 72 bp CCCCAGAGGGTGCCAGCCAAGGCGTCTCGGCAAATGTaGACCCAGACAACAGGGGACCAAGGAGTTGAAGGA +
Preference number: 4 (lower is better)
Translates to: PQRVPAKASRQM*TQTTGDQGVEG
Trigger: TCCTTCAACTCCTTGGTCCCCTGTTGTCTGGGTCAACATTTGCCGAGACGCCTTGGCTGGCACCCTCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp AGCCCACTGTGGCCCCCAGAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTAGCAGATCAGCACGTTaGTCTCCGCGAAGGACAAGG +
Preference number: 4 (lower is better)
Translates to: SPLWPPERHHCPYLECDPSRSAR*SPRRTR
Trigger: CCTTGTCCTTCGCGGAGATCAACGTGCTGATCTGCT...AGGATCACACTCCAAGTATGGGCAGTGATGGCGCTCTGGGGGCCACAGTGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp CTGATCCCTCGGCTACCTGGCCTCCCTCACAGAGATAATGGCAAGGCTTGGGAAAGGACAAGATCAAGGTaGTGGCTGCCGGGGGCACTG +
Preference number: 4 (lower is better)
Translates to: LIPRLPGLPHRDNGKAWERTRSR*WLPGAL
Trigger: CAGTGCCCCCGGCAGCCATCACCTTGATCTTGTCCT...TTCCCAAGCCTTGCCATTATCTCTGTGAGGGAGGCCAGGTAGCCGAGGGATCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp TGTGGCCCCCAGAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTCCCTCCAGCTGCCCATaGCCATCTCTGCATCTGGGC +
Preference number: 4 (lower is better)
Translates to: CGPQSAITAHTWSVILAIPSSCP*PSLHLG
Trigger: GCCCAGATGCAGAGATGGTCATGGGCAGCTGGAGGG...AATAGCTAGGATCACACTCCAAGTATGGGCAGTGATGGCGCTCTGGGGGCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp GAAGGGACATGGGCACTGGTAGGTGGTTGTCTTAGCTCTCAACCAGGGGATCCGTGTGTGGGGGATGCTTaGGGCAGAGCGGGTACAGCA +
Preference number: 4 (lower is better)
Translates to: EGTWALVGGCLSSQPGDPCVGDA*GRAGTA
Trigger: TGCTGTACCCGCTCTGCCTCAAGCATCCCCCACACA...CGGATCCCCTGGTTGAGAGCTAAGACAACCACCTACCAGTGCCCATGTCCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp AGCCCACTGTGGCCCCCAGAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTCTAGGACGAAGCGAGTaGAAACCAGAGCCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: SPLWPPERHHCPYLECDPLGRSE*KPEPCV
Trigger: CACACAGGGCTCTGGTTTTCACTCGCTTCGTCCTAG...AGGATCACACTCCAAGTATGGGCAGTGATGGCGCTCTGGGGGCCACAGTGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp GCCCACGGGCAGGGGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAAGGCTTCAGGAGGCTCTaGTTCCCACTCGCACTCCAG +
Preference number: 4 (lower is better)
Translates to: AHGQGLFAERSPSAAQSQGFRRL*FPLALQ
Trigger: CTGGAGTGCGAGTGGGAATCAGAGCCTCCTGAAGCC...TTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGCCCGTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp TTCCGTCCCTGGCTGGGGTGTCCCTTCCAGAGTGACAGAGATGATCTGAGGCTGAGGGGACCAAGGAGTTaGAGGAGGCTCACTGGAGAG +
Preference number: 4 (lower is better)
Translates to: FRPWLGCPFQSDRDDLRLRGPRS*RRLTGE
Trigger: CTCTCCAGTGAGCCTCCTTCAACTCCTTGGTCCCCT...CAGCCTCAGATCATCTCTGTCACTCTGGAAGGGACACCCCAGCCAGGGACGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp GGAACAGCATGTTGGTGTCCTTCATGTACTGGACACACACCTGGAGCGTGGCACCCACCCAGAGGAGCGTaGGCAGGGCGATCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: GTACWCPSCTGHTPGAWHPPRGA*AGRSSC
Trigger: ACAAGAGGATCGCCCTGCGCACGCTCCTCTGGGTGG...GTGCCACGCTCCAGGTGTGTGTCCAGTACATGAAGGACACCAACATGCTGTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575230.1
CDS-3UTR GCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGCCGGCCTCGGTGGCTaGGCTTGTGGCTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRAGLGG*ACGFHL
Trigger: CAGATGGAAGCCACAAGCGCAGCCACCGAGGCCGGC...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR GCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGCGCTCTTGGTCTTCCTaGTGCCCCAGAGTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVRSWSS*CPRVGP
Trigger: AGGCCCCACTCTGGGGCAGCAGGAAGACCAAGAGCG...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR GCA 90 bp TTTCCTGAGGCTCTCATACTTTCTCCTGCCCTGGAAAATGCCATCCAGGAGCTCTGGCGGTGCCCCCGATaGTGGCCGCGTAGCAGATGC +
Preference number: 4 (lower is better)
Translates to: FPEALILSPALENAIQELWRCPR*WPRSRC
Trigger: GCATCTGCTACGCGGCCAGCATCGGGGGCACCGCCA...GAGCTCCTGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGCCGGGGGCACTGCGTaGAAGGGCTCCATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRAGGTA*KGSICF
Trigger: GAAGCAGATGGAGCCCTTGCACGCAGTGCCCCCGGC...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR GCA 90 bp GCCATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTTGGGGATGGCAGGGGGCCCTGTGTGGGGGATaGTTGAGGCAGAGCGGGTAC +
Preference number: 4 (lower is better)
Translates to: AITAHTWSVILAIWGWQGALCGG*LRQSGY
Trigger: GTACCCGCTCTGCCTCAAGCATCCCCCACACAGGGC...CCCCTGCCATCCCCAAATAGCTAGGATCACACTCCAAGTATGGGCAGTGATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp GCCAGCCAAGGCGTCTCGGCAAATGTTGACCCAGACAACAGGGGACCAAGGAGTCCAGCAGTGGGAGGTTaGTCAAGACCAGGCATTCCG +
Preference number: 4 (lower is better)
Translates to: ASQGVSANVDPDNRGPRSPAVGG*SRPGIP
Trigger: CGGAATGCCTGGTCTTGAGCAACCTCCCACTGCTGG...ACTCCTTGGTCCCCTGTTGTCTGGGTCAACATTTGCCGAGACGCCTTGGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp AAGACCAGGCATTCCGTCCCTGGCTGGGGTGTCCCTTCCAGAGTGACAGAGATGCATCAGAATGACGAGTaGCAGCAGCAGGAGCGGGGT +
Preference number: 4 (lower is better)
Translates to: KTRHSVPGWGVPSRVTEMHQNDE*QQQERG
Trigger: ACCCCGCTCCTGCTGCTGCCACTCGTCATTCTGATG...CATCTCTGTCACTCTGGAAGGGACACCCCAGCCAGGGACGGAATGCCTGGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp TGGACAGTGTGGTCAGGAATCGTCCCACCCAAGGAACCAGACACATACTCGGTCTGTTACGTGCAGGCTTaGCCCCCACCCAGAGGAGCG +
Preference number: 4 (lower is better)
Translates to: WTVWSGIVPPKEPDTYSVCYVQA*PPPRGA
Trigger: CGCTCCTCTGGGTGGGGGCCAAGCCTGCACGTAACA...GACCGAGTATGTGTCTGGTTCCTTGGGTGGGACGATTCCTGACCACACTGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293800.10
CDS-3UTR CCA 90 bp AAGACCAGGCATTCCGTCCCTGGCTGGGGTGTCCCTTCCAGAGTGACAGAGATGCTCGCACTCCAGCAGTaGGAGGTTGCTCAAGACCAG +
Preference number: 4 (lower is better)
Translates to: KTRHSVPGWGVPSRVTEMLALQQ*EVAQDQ
Trigger: CTGGTCTTGAGCAACCTCCCACTGCTGGAGTGCGAG...CATCTCTGTCACTCTGGAAGGGACACCCCAGCCAGGGACGGAATGCCTGGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GCCAGCCAAGGCGTCTCGGCAAATGTTGACCCAGACAACAGGGGACCAAGGAGTATGAAGGGCGTAGGTTaGCCTGTGGTGCACTGTGGG +
Preference number: 4 (lower is better)
Translates to: ASQGVSANVDPDNRGPRSMKGVG*PVVHCG
Trigger: CCCACAGTGCACCACAGGCCAACCTACGCCCTTCAT...ACTCCTTGGTCCCCTGTTGTCTGGGTCAACATTTGCCGAGACGCCTTGGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp TTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACGATCCTCTGTTGTCACCATCAGCCAGCCGGGCATaGAGCCGGGGTCTCGGGAGA +
Preference number: 4 (lower is better)
Translates to: LLRDHQALLNLNDPLLSPSASRA*SRGLGR
Trigger: TCTCCCGAGACCCCGGCTTCATGCCCGGCTGGCTGA...TGGTGACAACAGAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGAGGACAAGATCAAGGTaGTGGCTGCCGGGGGCACTG +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVRTRSR*WLPGAL
Trigger: CAGTGCCCCCGGCAGCCATCACCTTGATCTTGTCCT...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR TCA 90 bp GCCAGCCAAGGCGTCTCGGCAAATGTTGACCCAGACAACAGGGGACCAAGGAGTTGCTTGTGCACTCAGTaGACACGGCAACGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: ASQGVSANVDPDNRGPRSCLCTQ*TRQRAR
Trigger: CCTTGCTCGTTGCCGTGTTCACTGAGTGCACAAGCA...ACTCCTTGGTCCCCTGTTGTCTGGGTCAACATTTGCCGAGACGCCTTGGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp CCAGCCATGGCTGTGAAGGCCAGTCAACAAAGGGAAGATTTTACCCAGAGGAGCCCCTCCAGCTGCCCATaGCCATCTCTGCATCTGGGC +
Preference number: 4 (lower is better)
Translates to: PAMAVKASQQREDFTQRSPSSCP*PSLHLG
Trigger: GCCCAGATGCAGAGATGGTCATGGGCAGCTGGAGGG...GCTCCTCTGGGTAAAATCTTCCCTTTGTTGACTGGCCTTCACAGCCATGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp AGTAGATTGGCCCACGGGCAGGGGTTGTTTGCTGAGAGATCACCAAGCGCTGCTAGGGGACCAAGGAGTTaGAGGAGGCTCACTGGAGAG +
Preference number: 4 (lower is better)
Translates to: SRLAHGQGLFAERSPSAARGPRS*RRLTGE
Trigger: CTCTCCAGTGAGCCTCCTTCAACTCCTTGGTCCCCT...AGCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGCCCGTGGGCCAATCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp GCCCACGGGCAGGGGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACACCAGCCATGGCTGTaGAGGCCAGTCAACAAAGGG +
Preference number: 4 (lower is better)
Translates to: AHGQGLFAERSPSAAQSQHQPWL*RPVNKG
Trigger: CCCTTTGTTGACTGGCCTTCACAGCCATGGCTGGTG...TTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGCCCGTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGCCACCCAGAGGAGCGTaGGCAGGGCGATCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRPPRGA*AGRSSC
Trigger: ACAAGAGGATCGCCCTGCGCACGCTCCTCTGGGTGG...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR GCA 90 bp GTGTGGTCAGGAATCGTCCCACCCAAGGAACCAGACACATACTCGGTCCTTGATCCACCCAGAGGAGCGTaGGCAGGGCGATCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: VWSGIVPPKEPDTYSVLDPPRGA*AGRSSC
Trigger: ACAAGAGGATCGCCCTGCGCACGCTCCTCTGGGTGG...ATCAAGGACCGAGTATGTGTCTGGTTCCTTGGGTGGGACGATTCCTGACCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp TTTCCTGAGGCTCTCATACTTTCTCCTGCCCTGGAAAATGCCATCCAGGAGCTCGCCGGCCTCGGTGGCTaGGCTTGTGGCTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: FPEALILSPALENAIQELAGLGG*ACGFHL
Trigger: CAGATGGAAGCCACAAGCGCAGCCACCGAGGCCGGC...GAGCTCCTGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGCGCTCTTGGTCTTCCTaGTGCCCCAGAGTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRRSWSS*CPRVGP
Trigger: AGGCCCCACTCTGGGGCAGCAGGAAGACCAAGAGCG...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR GCA 90 bp AGTAGATTGGCCCACGGGCAGGGGTTGTTTGCTGAGAGATCACCAAGCGCTGCTTGGCCGCGTAGCAGATaGACAGGGTCATGGCCTTAC +
Preference number: 4 (lower is better)
Translates to: SRLAHGQGLFAERSPSAAWPRSR*TGSWPY
Trigger: GTAAGGCCATGACCCTGTGCATCTGCTACGCGGCCA...AGCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGCCCGTGGGCCAATCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp GCCAGCCAAGGCGTCTCGGCAAATGTTGACCCAGACAACAGGGGACCAAGGAGTCCTTCTCGTTTTTCTTaGTCTCTAGCCCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: ASQGVSANVDPDNRGPRSPSRFS*SLARSP
Trigger: GGGGCTGCGGGCTAGAGAGCAAGAAAAACGAGAAGG...ACTCCTTGGTCCCCTGTTGTCTGGGTCAACATTTGCCGAGACGCCTTGGCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGTTCCGGTACTCCTCCTaGAGCACCTTGAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVFRYSS*STLRAA
Trigger: GGCTGCCCTCAAGGTGCTGCAGGAGGAGTACCGGAA...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR GCA 90 bp ACCCAGACAACAGGGGACCAAGGAGTTGAAGGAGGCTCACTGGAGAGGTGGGACCTAGTAGCAGCACGATaGCCCAGGGCACTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: TQTTGDQGVEGGSLERWDLVAAR*PRALSP
Trigger: AGGAGAAAGTGCCCTGGGGCATCGTGCTGCTACTAG...GTCCCACCTCTCCAGTGAGCCTCCTTCAACTCCTTGGTCCCCTGTTGTCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGGATCAAGGTGATGGCTaGCGGGGGCACTGCGTGCAA +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVDQGDG*RGHCVQ
Trigger: TTGCACGCAGTGCCCCCGGCAGCCATCACCTTGATC...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR GCA 90 bp GAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTTGGGGATGGCAGCCCTGTGTGGGGGATaGTTGAGGCAGAGCGGGTAC +
Preference number: 4 (lower is better)
Translates to: ERHHCPYLECDPSYLGMAALCGG*LRQSGY
Trigger: GTACCCGCTCTGCCTCAAGCATCCCCCACACAGGGC...TGCCATCCCCAAATAGCTAGGATCACACTCCAAGTATGGGCAGTGATGGCGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp AGGCAGAGCGGGTACAGCAGCCTGCATCCTGATCCCTCGGCTACCTGGCCTCCCTCTCATACTTTCTCCTaGCCTGGAAAATGCCATCCA +
Preference number: 4 (lower is better)
Translates to: RQSGYSSLHPDPSATWPPSHTFS*PGKCHP
Trigger: TGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGA...GGGAGGCCAGGTAGCCGAGGGATCAGGATGCAGGCTGCTGTACCCGCTCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp GGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACGATCCTCTGTTGGCCCAGCATCAGCCGTaGAGGCTTGGCCCCCACCCA +
Preference number: 4 (lower is better)
Translates to: GCLLRDHQALLNLNDPLLAQHQP*RLGPHP
Trigger: TGGGTGGGGGCCAAGCCTGCACGGCTGATGCTGGGC...CAACAGAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433363.7
CDS-3UTR CCA 90 bp AAGACCAGGCATTCCGTCCCTGGCTGGGGTGTCCCTTCCAGAGTGACAGAGATGCGGTGGCTGCGCTTGTaGCTTCCATCTGCTGCAATA +
Preference number: 4 (lower is better)
Translates to: KTRHSVPGWGVPSRVTEMRWLRL*LPSAAI
Trigger: TATTGCAGCAGATGGAAGCCACAAGCGCAGCCACCG...CATCTCTGTCACTCTGGAAGGGACACCCCAGCCAGGGACGGAATGCCTGGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp CCAGGAAGCAAAGTTCACGAGGTCCTTGCTGTCAGGAAACAACTCGTTCATCTGCCAGGCCGGCCTCGGTaGCTGCGCTTGTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: PGSKVHEVLAVRKQLVHLPGRPR*LRLWLP
Trigger: TGGAAGCCACAAGCGCAGCCACCGAGGCCGGCCTGG...CAGATGAACGAGTTGTTTCCTGACAGCAAGGACCTCGTGAACTTTGCTTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR CCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGTCCCTGGCAGCTCCTTaGCCTTGCCCTTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVSLAAP*PCPCPP
Trigger: TGGTGGACAAGGGCAAGGCCAAGGAGCTGCCAGGGA...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CCA 90 bp ACCCAGACAACAGGGGACCAAGGAGTTGAAGGAGGCTCACTGGAGAGGTGGGACAATCACTTGACTCCCTaGCAGCTCCTTGGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: TQTTGDQGVEGGSLERWDNHLTP*QLLGLA
Trigger: GGCAAGGCCAAGGAGCTGCCAGGGAGTCAAGTGATT...GTCCCACCTCTCCAGTGAGCCTCCTTCAACTCCTTGGTCCCCTGTTGTCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GCCCACGGGCAGGGGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAAGGGTGGCCACAAAGATaGCCACAGTGGCATCGGAGA +
Preference number: 4 (lower is better)
Translates to: AHGQGLFAERSPSAAQSQGWPQR*PQWHRR
Trigger: TCTCCGATGCCACTGTGGCCATCTTTGTGGCCACCC...TTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGCCCGTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp AGCCCACTGTGGCCCCCAGAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTCAGGGCACTTTCTCCTaGGTTACCTTCCAATCCAGC +
Preference number: 4 (lower is better)
Translates to: SPLWPPERHHCPYLECDPQGTFS*VTFQSS
Trigger: GCTGGATTGGAAGGTAACCCAGGAGAAAGTGCCCTG...AGGATCACACTCCAAGTATGGGCAGTGATGGCGCTCTGGGGGCCACAGTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp ACCCAGACAACAGGGGACCAAGGAGTTGAAGGAGGCTCACTGGAGAGGTGGGACAAGGCTTGGGAAAGATaGGTCCAGCAGCCCACTGAG +
Preference number: 4 (lower is better)
Translates to: TQTTGDQGVEGGSLERWDKAWER*VQQPTE
Trigger: CTCAGTGGGCTGCTGGACCCATCTTTCCCAAGCCTT...GTCCCACCTCTCCAGTGAGCCTCCTTCAACTCCTTGGTCCCCTGTTGTCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GAAGGGACATGGGCACTGGTAGGTGGTTGTCTTAGCTCTCAACCAGGGGATCCGCTGCTCAAGGTGAGCTaGAAGGGACATGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: EGTWALVGGCLSSQPGDPLLKVS*KGHGHW
Trigger: CCAGTGCCCATGTCCCTTCCAGCTCACCTTGAGCAG...CGGATCCCCTGGTTGAGAGCTAAGACAACCACCTACCAGTGCCCATGTCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp CCAGCCATGGCTGTGAAGGCCAGTCAACAAAGGGAAGATTTTACCCAGAGGAGCCAGGCATTCCGTCCCTaGCTGGGGTGTCCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: PAMAVKASQQREDFTQRSQAFRP*LGCPFQ
Trigger: CTGGAAGGGACACCCCAGCCAGGGACGGAATGCCTG...GCTCCTCTGGGTAAAATCTTCCCTTTGTTGACTGGCCTTCACAGCCATGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp TTCCGTCCCTGGCTGGGGTGTCCCTTCCAGAGTGACAGAGATGATCTGAGGCTGCTCATCCTTTGGTGGTaGCCACAGGAGGAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: FRPWLGCPFQSDRDDLRLLILWW*PQEEFP
Trigger: TGGGAACTCCTCCTGTGGCCACCACCAAAGGATGAG...CAGCCTCAGATCATCTCTGTCACTCTGGAAGGGACACCCCAGCCAGGGACGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp TGTGGCCCCCAGAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTGTGGTGCACTGTGGGTaGCAAGCCAGGTGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: CGPQSAITAHTWSVILAIVVHCG*QARCRP
Trigger: AGGACGACACCTGGCTTGCCACCCACAGTGCACCAC...AATAGCTAGGATCACACTCCAAGTATGGGCAGTGATGGCGCTCTGGGGGCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp TGGGGTTTCCTGAGGCTCTCATACTTTCTCCTGCCCTGGAAAATGCCATCCAGGGGCTCACTGGAGAGGTaGGACAGGGGGCCAGTCGAT +
Preference number: 4 (lower is better)
Translates to: WGFLRLSYFLLPWKMPSRGSLER*DRGPVD
Trigger: ATCGACTGGCCCCCTGTCCCACCTCTCCAGTGAGCC...CCTGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAACCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GCCATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTTGGGGATGGCAGGGGCTAGATAGCCCACTGTaGCCCCCAGAGCGCCATCAC +
Preference number: 4 (lower is better)
Translates to: AITAHTWSVILAIWGWQGLDSPL*PPERHH
Trigger: GTGATGGCGCTCTGGGGGCCACAGTGGGCTATCTAG...CCCCTGCCATCCCCAAATAGCTAGGATCACACTCCAAGTATGGGCAGTGATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp TGCCATCCAGGAGCTCATCTCTTTGCTACTGCCTCTCTTCCAGAGCAGCACAAGCAGCTGTGTCCACTCTaGGCCTCAGGTGAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: CHPGAHLFATASLPEQHKQLCPL*ASGEGG
Trigger: CCCTCCCTCACCTGAGGCCCAGAGTGGACACAGCTG...CTTGTGCTGCTCTGGAAGAGAGGCAGTAGCAAAGAGATGAGCTCCTGGATGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp CAGCATGTTGGTGTCCTTCATGTACTGGACACACACCTGGAGCGTGGCACGAAGAGGGACAGCTTGGAGTaGGGATGCAGGCTCGAGTGG +
Preference number: 4 (lower is better)
Translates to: QHVGVLHVLDTHLERGTKRDSLE*GCRLEW
Trigger: CCACTCGAGCCTGCATCCCCACTCCAAGCTGTCCCT...CTTCGTGCCACGCTCCAGGTGTGTGTCCAGTACATGAAGGACACCAACATGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575230.1
CDS-3UTR TCA 90 bp AGCCCACTGTGGCCCCCAGAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTCCTTCAAAAATCACTTaGCTCCCTGGCAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SPLWPPERHHCPYLECDPPSKIT*LPGSSL
Trigger: CAAGGAGCTGCCAGGGAGTCAAGTGATTTTTGAAGG...AGGATCACACTCCAAGTATGGGCAGTGATGGCGCTCTGGGGGCCACAGTGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGAGGACAAGATCAAGGTaGTGGCTGCCGGGGGCACTG +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRRTRSR*WLPGAL
Trigger: CAGTGCCCCCGGCAGCCATCACCTTGATCTTGTCCT...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR TCA 90 bp GCCATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTTGGGGATGGCAGGGGGGTCCAGCAGCCCACTaGGGGGTTCCCTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: AITAHTWSVILAIWGWQGGPAAH*GVPFIS
Trigger: AGAAATGAAGGGAACCCCTCAGTGGGCTGCTGGACC...CCCCTGCCATCCCCAAATAGCTAGGATCACACTCCAAGTATGGGCAGTGATGGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGGCTTCAGGAGGCTCTaGTTCCCACTCGCACTCCAG +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRGFRRL*FPLALQ
Trigger: CTGGAGTGCGAGTGGGAATCAGAGCCTCCTGAAGCC...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp ACCCAGACAACAGGGGACCAAGGAGTTGAAGGAGGCTCACTGGAGAGGTGGGACAGCCAGGTGTCGTCCTaGAGTTGGCAACTCAGATTC +
Preference number: 4 (lower is better)
Translates to: TQTTGDQGVEGGSLERWDSQVSS*SWQLRF
Trigger: GAATCTGAGTTGCCAACTTCAGGACGACACCTGGCT...GTCCCACCTCTCCAGTGAGCCTCCTTCAACTCCTTGGTCCCCTGTTGTCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp TGGACAGTGTGGTCAGGAATCGTCCCACCCAAGGAACCAGACACATACTCGGTCGCAGGGGTTGTTTGCTaGGAGATCACCAAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: WTVWSGIVPPKEPDTYSVAGVVC*EITKRC
Trigger: GCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGC...GACCGAGTATGTGTCTGGTTCCTTGGGTGGGACGATTCCTGACCACACTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGAGGGCGATCCTCTTGTaGAGGTTCCAGCGCTCCACA +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVRAILL*RFQRST
Trigger: TGTGGAGCGCTGGAACCTGCACAAGAGGATCGCCCT...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR GCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGTCTTGGTCTTCCTGCTaGCCCAGAGTGGGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVSWSSC*PRVGPS
Trigger: TGAAGGCCCCACTCTGGGGCAGCAGGAAGACCAAGA...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR GCA 90 bp GCCAGGCGAACAGCAGCATCACCAGCATGTTGGGAAAGGCAAATGCAAACCAGGTCTTGGTCTTCCTGCTaGCCCAGAGTGGGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: ARRTAASPACWERQMQTRSWSSC*PRVGPS
Trigger: TGAAGGCCCCACTCTGGGGCAGCAGGAAGACCAAGA...CCTGGTTTGCATTTGCCTTTCCCAACATGCTGGTGATGCTGCTGTTCGCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR GCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGTGGCCGCGTAGCAGATaGACAGGGTCATGGCCTTAC +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVWPRSR*TGSWPY
Trigger: GTAAGGCCATGACCCTGTGCATCTGCTACGCGGCCA...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR GCA 90 bp GCAGCATCACCAGCATGTTGGGAAAGGCAAATGCAAACCAGGAAGCAAAGTTCATGGCGGTGCCCCCGATaGTGGCCGCGTAGCAGATGC +
Preference number: 4 (lower is better)
Translates to: AASPACWERQMQTRKQSSWRCPR*WPRSRC
Trigger: GCATCTGCTACGCGGCCAGCATCGGGGGCACCGCCA...TGAACTTTGCTTCCTGGTTTGCATTTGCCTTTCCCAACATGCTGGTGATGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR GCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGTTCCGGTACTCCTCCTaGAGCACCTTGAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRFRYSS*STLRAA
Trigger: GGCTGCCCTCAAGGTGCTGCAGGAGGAGTACCGGAA...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR GCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGTGCAAGGGCTCCATCTaGTTCCCCATCCACACGGAC +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVCKGSI*FPIHTD
Trigger: GTCCGTGTGGATGGGGAAGCAGATGGAGCCCTTGCA...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR GCA 90 bp GTGTGGTCAGGAATCGTCCCACCCAAGGAACCAGACACATACTCGGTCCTTGATGATCAAGGTGATGGCTaGCGGGGGCACTGCGTGCAA +
Preference number: 4 (lower is better)
Translates to: VWSGIVPPKEPDTYSVLDDQGDG*RGHCVQ
Trigger: TTGCACGCAGTGCCCCCGGCAGCCATCACCTTGATC...ATCAAGGACCGAGTATGTGTCTGGTTCCTTGGGTGGGACGATTCCTGACCACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp GCCCACGGGCAGGGGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAAGCCCATGACCATCTCTaGATCTGGGCTTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: AHGQGLFAERSPSAAQSQAHDHL*IWAWRK
Trigger: CTTCCTCCAAGCCCAGATGCAGAGATGGTCATGGGC...TTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGCCCGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp GAAGGGACATGGGCACTGGTAGGTGGTTGTCTTAGCTCTCAACCAGGGGATCCGGCCCATGACCATCTCTaGATCTGGGCTTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: EGTWALVGGCLSSQPGDPAHDHL*IWAWRK
Trigger: CTTCCTCCAAGCCCAGATGCAGAGATGGTCATGGGC...CGGATCCCCTGGTTGAGAGCTAAGACAACCACCTACCAGTGCCCATGTCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp CCAGCCATGGCTGTGAAGGCCAGTCAACAAAGGGAAGATTTTACCCAGAGGAGCGCGGGTACAGCAGCCTaGATCCTGATCCCTCGGCTA +
Preference number: 4 (lower is better)
Translates to: PAMAVKASQQREDFTQRSAGTAA*ILIPRL
Trigger: TAGCCGAGGGATCAGGATGCAGGCTGCTGTACCCGC...GCTCCTCTGGGTAAAATCTTCCCTTTGTTGACTGGCCTTCACAGCCATGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp AGCCCACTGTGGCCCCCAGAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTGAGATCACCAAGCGCTaGTCAATCTCAACGATCCTC +
Preference number: 4 (lower is better)
Translates to: SPLWPPERHHCPYLECDPEITKR*SISTIL
Trigger: GAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTC...AGGATCACACTCCAAGTATGGGCAGTGATGGCGCTCTGGGGGCCACAGTGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGCATCAGAATGACGAGTaGCAGCAGCAGGAGCGGGGT +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVHQNDE*QQQERG
Trigger: ACCCCGCTCCTGCTGCTGCCACTCGTCATTCTGATG...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CCA 90 bp ACCCAGACAACAGGGGACCAAGGAGTTGAAGGAGGCTCACTGGAGAGGTGGGACGGACACACACCTGCCTaGAGTCCAGAATCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: TQTTGDQGVEGGSLERWDGHTPA*SPESGR
Trigger: TCTTCCAGATTCTGGACTCCAGGCAGGTGTGTGTCC...GTCCCACCTCTCCAGTGAGCCTCCTTCAACTCCTTGGTCCCCTGTTGTCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp TTCCGTCCCTGGCTGGGGTGTCCCTTCCAGAGTGACAGAGATGATCTGAGGCTGGTGTCCTTCATGTACTaGACACACACCTGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: FRPWLGCPFQSDRDDLRLVSFMY*THTCLE
Trigger: CTCCAGGCAGGTGTGTGTCCAGTACATGAAGGACAC...CAGCCTCAGATCATCTCTGTCACTCTGGAAGGGACACCCCAGCCAGGGACGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp TTCCGTCCCTGGCTGGGGTGTCCCTTCCAGAGTGACAGAGATGATCTGAGGCTGCAGGGCACTTTCTCCTaGGTTACCTTCCAATCCAGC +
Preference number: 4 (lower is better)
Translates to: FRPWLGCPFQSDRDDLRLQGTFS*VTFQSS
Trigger: GCTGGATTGGAAGGTAACCCAGGAGAAAGTGCCCTG...CAGCCTCAGATCATCTCTGTCACTCTGGAAGGGACACCCCAGCCAGGGACGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GCCCACGGGCAGGGGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACGATGGAGCGAGACATaGAGGCAAAGATGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: AHGQGLFAERSPSAAQSQRWSET*RQRWAG
Trigger: TCCTGCCCATCTTTGCCTCCATGTCTCGCTCCATCG...TTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGCCCGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp CTGATCCCTCGGCTACCTGGCCTCCCTCACAGAGATAATGGCAAGGCTTGGGAAAGGTGGCCCATTGGCTaGGTTTTGGTGGTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: LIPRLPGLPHRDNGKAWERWPIG*VLVVCG
Trigger: TCCACACACCACCAAAACCCAGCCAATGGGCCACCT...TTCCCAAGCCTTGCCATTATCTCTGTGAGGGAGGCCAGGTAGCCGAGGGATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GCCCACGGGCAGGGGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAAAAGGCTTGGGAAAGATaGGTCCAGCAGCCCACTGAG +
Preference number: 4 (lower is better)
Translates to: AHGQGLFAERSPSAAQSQKAWER*VQQPTE
Trigger: CTCAGTGGGCTGCTGGACCCATCTTTCCCAAGCCTT...TTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGCCCGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp AGTAGATTGGCCCACGGGCAGGGGTTGTTTGCTGAGAGATCACCAAGCGCTGCTGAGCTGGAAGGGACATaGGCACTGGTAGGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: SRLAHGQGLFAERSPSAAELEGT*ALVGGC
Trigger: ACAACCACCTACCAGTGCCCATGTCCCTTCCAGCTC...AGCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGCCCGTGGGCCAATCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GAAGGGACATGGGCACTGGTAGGTGGTTGTCTTAGCTCTCAACCAGGGGATCCGGAGCTGGAAGGGACATaGGCACTGGTAGGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: EGTWALVGGCLSSQPGDPELEGT*ALVGGC
Trigger: ACAACCACCTACCAGTGCCCATGTCCCTTCCAGCTC...CGGATCCCCTGGTTGAGAGCTAAGACAACCACCTACCAGTGCCCATGTCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp ACCCAGACAACAGGGGACCAAGGAGTTGAAGGAGGCTCACTGGAGAGGTGGGACCTAGCTATTTGGGGATaGCAGGGGAAGCATCTCCCA +
Preference number: 4 (lower is better)
Translates to: TQTTGDQGVEGGSLERWDLAIWG*QGKHLP
Trigger: TGGGAGATGCTTCCCCTGCCATCCCCAAATAGCTAG...GTCCCACCTCTCCAGTGAGCCTCCTTCAACTCCTTGGTCCCCTGTTGTCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp CCAGCCATGGCTGTGAAGGCCAGTCAACAAAGGGAAGATTTTACCCAGAGGAGCCTAGATAGCCCACTGTaGCCCCCAGAGCGCCATCAC +
Preference number: 4 (lower is better)
Translates to: PAMAVKASQQREDFTQRSLDSPL*PPERHH
Trigger: GTGATGGCGCTCTGGGGGCCACAGTGGGCTATCTAG...GCTCCTCTGGGTAAAATCTTCCCTTTGTTGACTGGCCTTCACAGCCATGGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp TTGGGAAAGGCAAATGCAAACCAGGAAGCAAAGTTCACGAGGTCCTTGCTGTCATCAGCCGTGCAGGCTTaGCCCCCACCCAGAGGAGCG +
Preference number: 4 (lower is better)
Translates to: LGKANANQEAKFTRSLLSSAVQA*PPPRGA
Trigger: CGCTCCTCTGGGTGGGGGCCAAGCCTGCACGGCTGA...TGACAGCAAGGACCTCGTGAACTTTGCTTCCTGGTTTGCATTTGCCTTTCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR TCA 90 bp GATCTCCGCGAAGGACAAGGGCCCCAGCTTCCGGTACTCCTCCTGCAGCACCTTAGATCACGAAGGACTTaGACTTGGAGACATAGCTCA +
Preference number: 4 (lower is better)
Translates to: DLREGQGPQLPVLLLQHLRSRRT*TWRHSS
Trigger: TGAGCTATGTCTCCAAGTTCAAGTCCTTCGTGATCT...AAGGTGCTGCAGGAGGAGTACCGGAAGCTGGGGCCCTTGTCCTTCGCGGAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR TCA 90 bp CTGTCAGGAAACAACTCGTTCATCTGGCCCAGGAGCACCACGTTGGGTCCCGTCCCTTCAAAAATCACTTaGCTCCCTGGCAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LSGNNSFIWPRSTTLGPVPSKIT*LPGSSL
Trigger: CAAGGAGCTGCCAGGGAGTCAAGTGATTTTTGAAGG...GACGGGACCCAACGTGGTGCTCCTGGGCCAGATGAACGAGTTGTTTCCTGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR TCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGCCTCCTGCAGCACCTTaGGGGCAGCCTTCTCGTTTT +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRPPAAP*GQPSRF
Trigger: AAAACGAGAAGGCTGCCCTCAAGGTGCTGCAGGAGG...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR TCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGTGCTTGTGCACTCAGTaGACACGGCAACGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVCLCTQ*TRQRAR
Trigger: CCTTGCTCGTTGCCGTGTTCACTGAGTGCACAAGCA...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR TCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGCCCGTCCCCAGGTGTTaGCAGCCAAAAACACACAGA +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVPVPRC*QPKTHR
Trigger: TCTGTGTGTTTTTGGCTGTCAACACCTGGGGACGGG...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR TCA 90 bp GTGTGGTCAGGAATCGTCCCACCCAAGGAACCAGACACATACTCGGTCCTTGATCGTCTCGGCAAATGTTaGCCCAGACAACAGGGGACC +
Preference number: 4 (lower is better)
Translates to: VWSGIVPPKEPDTYSVLDRLGKC*PRQQGT
Trigger: GGTCCCCTGTTGTCTGGGTCAACATTTGCCGAGACG...ATCAAGGACCGAGTATGTGTCTGGTTCCTTGGGTGGGACGATTCCTGACCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp AAGACCAGGCATTCCGTCCCTGGCTGGGGTGTCCCTTCCAGAGTGACAGAGATGTGGCATGAAAGACTCTaGAGTGGCATAGCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: KTRHSVPGWGVPSRVTEMWHERL*SGIASG
Trigger: TCCACTGGCTATGCCACTTCAGAGTCTTTCATGCCA...CATCTCTGTCACTCTGGAAGGGACACCCCAGCCAGGGACGGAATGCCTGGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp ACCCAGACAACAGGGGACCAAGGAGTTGAAGGAGGCTCACTGGAGAGGTGGGACGCTCAAACGCTGGCATaGAAGACTCTGAAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: TQTTGDQGVEGGSLERWDAQTLA*KTLKWH
Trigger: ATGCCACTTCAGAGTCTTTCATGCCAGCGTTTGAGC...GTCCCACCTCTCCAGTGAGCCTCCTTCAACTCCTTGGTCCCCTGTTGTCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp GCCATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTTGGGGATGGCAGGGGCACATACTCGGTCCTTaGTGGGGTTTCCTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: AITAHTWSVILAIWGWQGHILGP*WGFLRL
Trigger: GAGCCTCAGGAAACCCCATCAAGGACCGAGTATGTG...CCCCTGCCATCCCCAAATAGCTAGGATCACACTCCAAGTATGGGCAGTGATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp AAGACTCTGAAGTGGCATAGCCAGTGGAAATTAACAGCTGTGTCCACTCTGGGCCCACCCAGAGGAGCGTaGGCAGGGCGATCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: KTLKWHSQWKLTAVSTLGPPRGA*AGRSSC
Trigger: ACAAGAGGATCGCCCTGCGCACGCTCCTCTGGGTGG...GCCCAGAGTGGACACAGCTGTTAATTTCCACTGGCTATGCCACTTCAGAGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp TGTGGCCCCCAGAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTCATCATGGCCGTGGTTaGCGTGTTACGTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: CGPQSAITAHTWSVILAIHHGRG*RVTCRL
Trigger: AAGCCTGCACGTAACACGGCAACCACGGCCATGATG...AATAGCTAGGATCACACTCCAAGTATGGGCAGTGATGGCGCTCTGGGGGCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293800.10
CDS-3UTR GCA 90 bp AGTAGATTGGCCCACGGGCAGGGGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCTTGTGGCTTCCATCTaGTGCAATATGGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: SRLAHGQGLFAERSPSAALVASI*CNMAST
Trigger: CGTGGAGGCCATATTGCAGCAGATGGAAGCCACAAG...AGCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGCCCGTGGGCCAATCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp AGGGAAGATTTTACCCAGAGGAGCTCAAACGCTGGCATGAAAGACTCTGAAGTGGCCGGCCTCGGTGGCTaGGCTTGTGGCTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: REDFTQRSSNAGMKDSEVAGLGG*ACGFHL
Trigger: CAGATGGAAGCCACAAGCGCAGCCACCGAGGCCGGC...CACTTCAGAGTCTTTCATGCCAGCGTTTGAGCTCCTCTGGGTAAAATCTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp TGGGGTTTCCTGAGGCTCTCATACTTTCTCCTGCCCTGGAAAATGCCATCCAGGTCTTGGTCTTCCTGCTaGCCCAGAGTGGGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: WGFLRLSYFLLPWKMPSRSWSSC*PRVGPS
Trigger: TGAAGGCCCCACTCTGGGGCAGCAGGAAGACCAAGA...CCTGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp GTGTGGTCAGGAATCGTCCCACCCAAGGAACCAGACACATACTCGGTCCTTGATTCTTGGTCTTCCTGCTaGCCCAGAGTGGGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: VWSGIVPPKEPDTYSVLDSWSSC*PRVGPS
Trigger: TGAAGGCCCCACTCTGGGGCAGCAGGAAGACCAAGA...ATCAAGGACCGAGTATGTGTCTGGTTCCTTGGGTGGGACGATTCCTGACCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGTCTTGGTCTTCCTGCTaGCCCAGAGTGGGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRSWSSC*PRVGPS
Trigger: TGAAGGCCCCACTCTGGGGCAGCAGGAAGACCAAGA...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR GCA 90 bp AAGACTCTGAAGTGGCATAGCCAGTGGAAATTAACAGCTGTGTCCACTCTGGGCCGCTCTTGGTCTTCCTaGTGCCCCAGAGTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: KTLKWHSQWKLTAVSTLGRSWSS*CPRVGP
Trigger: AGGCCCCACTCTGGGGCAGCAGGAAGACCAAGAGCG...GCCCAGAGTGGACACAGCTGTTAATTTCCACTGGCTATGCCACTTCAGAGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp TGGGAAAGGCAAATGCAAACCAGGAAGCAAAGTTCACGAGGTCCTTGCTGTCAGCGCTCTTGGTCTTCCTaGTGCCCCAGAGTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: WERQMQTRKQSSRGPCCQRSWSS*CPRVGP
Trigger: AGGCCCCACTCTGGGGCAGCAGGAAGACCAAGAGCG...CTGACAGCAAGGACCTCGTGAACTTTGCTTCCTGGTTTGCATTTGCCTTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR GCA 90 bp GAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTTGGGGATGGCATGGCCGCGTAGCAGATaGACAGGGTCATGGCCTTAC +
Preference number: 4 (lower is better)
Translates to: ERHHCPYLECDPSYLGMAWPRSR*TGSWPY
Trigger: GTAAGGCCATGACCCTGTGCATCTGCTACGCGGCCA...TGCCATCCCCAAATAGCTAGGATCACACTCCAAGTATGGGCAGTGATGGCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGTGGCCGCGTAGCAGATaGACAGGGTCATGGCCTTAC +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRWPRSR*TGSWPY
Trigger: GTAAGGCCATGACCCTGTGCATCTGCTACGCGGCCA...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR GCA 90 bp GCCATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTTGGGGATGGCAGGGGCCTTCTCGTTTTTCTTaGTCTCTAGCCCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: AITAHTWSVILAIWGWQGPSRFS*SLARSP
Trigger: GGGGCTGCGGGCTAGAGAGCAAGAAAAACGAGAAGG...CCCCTGCCATCCCCAAATAGCTAGGATCACACTCCAAGTATGGGCAGTGATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGCTAGTAGCAGCACGATaGCCCAGGGCACTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVLVAAR*PRALSP
Trigger: AGGAGAAAGTGCCCTGGGGCATCGTGCTGCTACTAG...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR GCA 90 bp TGCCATCCAGGAGCTCATCTCTTTGCTACTGCCTCTCTTCCAGAGCAGCACAAGTGCAAGGGCTCCATCTaGTTCCCCATCCACACGGAC +
Preference number: 4 (lower is better)
Translates to: CHPGAHLFATASLPEQHKCKGSI*FPIHTD
Trigger: GTCCGTGTGGATGGGGAAGCAGATGGAGCCCTTGCA...CTTGTGCTGCTCTGGAAGAGAGGCAGTAGCAAAGAGATGAGCTCCTGGATGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp CAACGATCCTCTGTTGTCACCAGCCATGGCTGTGAAGGCCAGTCAACAAAGGGACCAGCAGTGGGAGGTTaGTCAAGACCAGGCATTCCG +
Preference number: 4 (lower is better)
Translates to: QRSSVVTSHGCEGQSTKGPAVGG*SRPGIP
Trigger: CGGAATGCCTGGTCTTGAGCAACCTCCCACTGCTGG...TCCCTTTGTTGACTGGCCTTCACAGCCATGGCTGGTGACAACAGAGGATCGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp AGTAGATTGGCCCACGGGCAGGGGTTGTTTGCTGAGAGATCACCAAGCGCTGCTTCCTGCCCTGGAAAATaGCATCCAGGAGCTCATCTC +
Preference number: 4 (lower is better)
Translates to: SRLAHGQGLFAERSPSAASCPGK*HPGAHL
Trigger: GAGATGAGCTCCTGGATGGCATTTTCCAGGGCAGGA...AGCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGCCCGTGGGCCAATCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp TTGGTGTCCTTCATGTACTGGACACACACCTGGAGCGTGGCACGAAGGCCTCATATCAGGACTGTCCCTTaGCACACACTAGAGCCACCC +
Preference number: 4 (lower is better)
Translates to: LVSFMYWTHTWSVARRPHIRTVP*HTLEPP
Trigger: GGGTGGCTCTAGTGTGTGGCAAGGGACAGTCCTGAT...ATGAGGCCTTCGTGCCACGCTCCAGGTGTGTGTCCAGTACATGAAGGACACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575230.1
CDS-3UTR CCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGCCATCTGCTGCAATATaGCCTCCACGATGGGCACCA +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVPSAAI*PPRWAP
Trigger: TGGTGCCCATCGTGGAGGCCATATTGCAGCAGATGG...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CCA 90 bp GTGGCCCATTGGCTGGGTTTTGGTGGTGTGTGGACATCGTTGGGTCATTTTGGGCCATCTGCTGCAATATaGCCTCCACGATGGGCACCA +
Preference number: 4 (lower is better)
Translates to: VAHWLGFGGVWTSLGHFGPSAAI*PPRWAP
Trigger: TGGTGCCCATCGTGGAGGCCATATTGCAGCAGATGG...CCCAAAATGACCCAACGATGTCCACACACCACCAAAACCCAGCCAATGGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp AAATGCCATCCAGGAGCTCATCTCTTTGCTACTGCCTCTCTTCCAGAGCAGCACTCCCTGGCAGCTCCTTaGCCTTGCCCTTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: KCHPGAHLFATASLPEQHSLAAP*PCPCPP
Trigger: TGGTGGACAAGGGCAAGGCCAAGGAGCTGCCAGGGA...GTGCTGCTCTGGAAGAGAGGCAGTAGCAAAGAGATGAGCTCCTGGATGGCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGAATCACTTGACTCCCTaGCAGCTCCTTGGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVNHLTP*QLLGLA
Trigger: GGCAAGGCCAAGGAGCTGCCAGGGAGTCAAGTGATT...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CCA 90 bp AGTAGATTGGCCCACGGGCAGGGGTTGTTTGCTGAGAGATCACCAAGCGCTGCTAACAACTCGTTCATCTaGCCCAGGAGCACCACGTTG +
Preference number: 4 (lower is better)
Translates to: SRLAHGQGLFAERSPSAANNSFI*PRSTTL
Trigger: CAACGTGGTGCTCCTGGGCCAGATGAACGAGTTGTT...AGCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGCCCGTGGGCCAATCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGGGTGGCCACAAAGATaGCCACAGTGGCATCGGAGA +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRGWPQR*PQWHRR
Trigger: TCTCCGATGCCACTGTGGCCATCTTTGTGGCCACCC...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGCGATGGAGCGAGACATaGAGGCAAAGATGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVRWSET*RQRWAG
Trigger: TCCTGCCCATCTTTGCCTCCATGTCTCGCTCCATCG...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
CDS-3UTR CCA 90 bp TGTGGCCCCCAGAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTCGATGGAGCGAGACATaGAGGCAAAGATGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: CGPQSAITAHTWSVILAIRWSET*RQRWAG
Trigger: TCCTGCCCATCTTTGCCTCCATGTCTCGCTCCATCG...AATAGCTAGGATCACACTCCAAGTATGGGCAGTGATGGCGCTCTGGGGGCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTTGGGGATGGCAATGAAGGGCGTAGGTTaGCCTGTGGTGCACTGTGGG +
Preference number: 4 (lower is better)
Translates to: ERHHCPYLECDPSYLGMAMKGVG*PVVHCG
Trigger: CCCACAGTGCACCACAGGCCAACCTACGCCCTTCAT...TGCCATCCCCAAATAGCTAGGATCACACTCCAAGTATGGGCAGTGATGGCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GCCAGCCAAGGCGTCTCGGCAAATGTTGACCCAGACAACAGGGGACCAAGGAGTGTGATCCTAGCTATTTaGGGATGGCAGGGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: ASQGVSANVDPDNRGPRSVILAI*GWQGKH
Trigger: ATGCTTCCCCTGCCATCCCCAAATAGCTAGGATCAC...ACTCCTTGGTCCCCTGTTGTCTGGGTCAACATTTGCCGAGACGCCTTGGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp AGTAGATTGGCCCACGGGCAGGGGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCCTTCAAAAATCACTTaGCTCCCTGGCAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SRLAHGQGLFAERSPSAAPSKIT*LPGSSL
Trigger: CAAGGAGCTGCCAGGGAGTCAAGTGATTTTTGAAGG...AGCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGCCCGTGGGCCAATCTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGAGCAGATCAGCACGTTaGTCTCCGCGAAGGACAAGG +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRSRSAR*SPRRTR
Trigger: CCTTGTCCTTCGCGGAGATCAACGTGCTGATCTGCT...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR TCA 90 bp AGTAGATTGGCCCACGGGCAGGGGTTGTTTGCTGAGAGATCACCAAGCGCTGCTTCTGTGAAGGCACAATaGATAGCAGGGTGGCCACAA +
Preference number: 4 (lower is better)
Translates to: SRLAHGQGLFAERSPSAASVKAQ*IAGWPQ
Trigger: TTGTGGCCACCCTGCTATTCATTGTGCCTTCACAGA...AGCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGCCCGTGGGCCAATCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp GGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACGATCCTCTGTTGAGGACAAGATCAAGGTaGTGGCTGCCGGGGGCACTG +
Preference number: 4 (lower is better)
Translates to: GCLLRDHQALLNLNDPLLRTRSR*WLPGAL
Trigger: CAGTGCCCCCGGCAGCCATCACCTTGATCTTGTCCT...CAACAGAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGTGCTTGTGCACTCAGTaGACACGGCAACGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRCLCTQ*TRQRAR
Trigger: CCTTGCTCGTTGCCGTGTTCACTGAGTGCACAAGCA...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR TCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGCCCGTCCCCAGGTGTTaGCAGCCAAAAACACACAGA +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRPVPRC*QPKTHR
Trigger: TCTGTGTGTTTTTGGCTGTCAACACCTGGGGACGGG...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR TCA 90 bp TTTCCTGAGGCTCTCATACTTTCTCCTGCCCTGGAAAATGCCATCCAGGAGCTCGGTCCAGCAGCCCACTaGGGGGTTCCCTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: FPEALILSPALENAIQELGPAAH*GVPFIS
Trigger: AGAAATGAAGGGAACCCCTCAGTGGGCTGCTGGACC...GAGCTCCTGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp GAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTTGGGGATGGCACTAGGACGAAGCGAGTaGAAACCAGAGCCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: ERHHCPYLECDPSYLGMALGRSE*KPEPCV
Trigger: CACACAGGGCTCTGGTTTTCACTCGCTTCGTCCTAG...TGCCATCCCCAAATAGCTAGGATCACACTCCAAGTATGGGCAGTGATGGCGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp GTGGCCCATTGGCTGGGTTTTGGTGGTGTGTGGACATCGTTGGGTCATTTTGGGAGCCAGGTGTCGTCCTaGAGTTGGCAACTCAGATTC +
Preference number: 4 (lower is better)
Translates to: VAHWLGFGGVWTSLGHFGSQVSS*SWQLRF
Trigger: GAATCTGAGTTGCCAACTTCAGGACGACACCTGGCT...CCCAAAATGACCCAACGATGTCCACACACCACCAAAACCCAGCCAATGGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGTACTGGACACACACCTaGCTGGAGTCCAGAATCTGG +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVYWTHT*LESRIW
Trigger: CCAGATTCTGGACTCCAGGCAGGTGTGTGTCCAGTA...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293800.10
ENST00000433363.7
ENST00000573648.5
CDS-3UTR GCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGGTGGCTTCCATCTGCTaGAATATGGCCTCCACGATG +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVVASIC*NMASTM
Trigger: CATCGTGGAGGCCATATTGCAGCAGATGGAAGCCAC...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR GCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGCTTGTGGCTTCCATCTaGTGCAATATGGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVLVASI*CNMAST
Trigger: CGTGGAGGCCATATTGCAGCAGATGGAAGCCACAAG...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR GCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGCCTTCTCGTTTTTCTTaGTCTCTAGCCCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRPSRFS*SLARSP
Trigger: GGGGCTGCGGGCTAGAGAGCAAGAAAAACGAGAAGG...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR GCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGCTAGTAGCAGCACGATaGCCCAGGGCACTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRLVAAR*PRALSP
Trigger: AGGAGAAAGTGCCCTGGGGCATCGTGCTGCTACTAG...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR GCA 90 bp GGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACGATCCTCTGTTGGCGGGTACAGCAGCCTaGATCCTGATCCCTCGGCTA +
Preference number: 4 (lower is better)
Translates to: GCLLRDHQALLNLNDPLLAGTAA*ILIPRL
Trigger: TAGCCGAGGGATCAGGATGCAGGCTGCTGTACCCGC...CAACAGAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp GAAGGGACATGGGCACTGGTAGGTGGTTGTCTTAGCTCTCAACCAGGGGATCCGGCGGGGGAAAGAAGATaGTTGTCTCTCATGTCTGTC +
Preference number: 4 (lower is better)
Translates to: EGTWALVGGCLSSQPGDPAGERR*LSLMSV
Trigger: GACAGACATGAGAGACAAGCATCTTCTTTCCCCCGC...CGGATCCCCTGGTTGAGAGCTAAGACAACCACCTACCAGTGCCCATGTCCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp AAGACCAGGCATTCCGTCCCTGGCTGGGGTGTCCCTTCCAGAGTGACAGAGATGTCATCTCTTTGCTACTaGCTCTCTTCCAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: KTRHSVPGWGVPSRVTEMSSLCY*LSSRAA
Trigger: TGCTGCTCTGGAAGAGAGGCAGTAGCAAAGAGATGA...CATCTCTGTCACTCTGGAAGGGACACCCCAGCCAGGGACGGAATGCCTGGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp GCCAGCCAAGGCGTCTCGGCAAATGTTGACCCAGACAACAGGGGACCAAGGAGTTCATCTCTTTGCTACTaGCTCTCTTCCAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: ASQGVSANVDPDNRGPRSSSLCY*LSSRAA
Trigger: TGCTGCTCTGGAAGAGAGGCAGTAGCAAAGAGATGA...ACTCCTTGGTCCCCTGTTGTCTGGGTCAACATTTGCCGAGACGCCTTGGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp AAATGCCATCCAGGAGCTCATCTCTTTGCTACTGCCTCTCTTCCAGAGCAGCACCATCAGAATGACGAGTaGCAGCAGCAGGAGCGGGGT +
Preference number: 4 (lower is better)
Translates to: KCHPGAHLFATASLPEQHHQNDE*QQQERG
Trigger: ACCCCGCTCCTGCTGCTGCCACTCGTCATTCTGATG...GTGCTGCTCTGGAAGAGAGGCAGTAGCAAAGAGATGAGCTCCTGGATGGCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGGGACACACACCTGCCTaGAGTCCAGAATCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVGHTPA*SPESGR
Trigger: TCTTCCAGATTCTGGACTCCAGGCAGGTGTGTGTCC...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293800.10
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CCA 90 bp TTCCGTCCCTGGCTGGGGTGTCCCTTCCAGAGTGACAGAGATGATCTGAGGCTGCCAGGAACAGCATGTTaGTGTCCTTCATGTACTGGA +
Preference number: 4 (lower is better)
Translates to: FRPWLGCPFQSDRDDLRLPGTAC*CPSCTG
Trigger: TCCAGTACATGAAGGACACCAACATGCTGTTCCTGG...CAGCCTCAGATCATCTCTGTCACTCTGGAAGGGACACCCCAGCCAGGGACGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGCCATCTGCTGCAATATaGCCTCCACGATGGGCACCA +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRPSAAI*PPRWAP
Trigger: TGGTGCCCATCGTGGAGGCCATATTGCAGCAGATGG...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGCGGTGGCTGCGCTTGTaGCTTCCATCTGCTGCAATA +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRRWLRL*LPSAAI
Trigger: TATTGCAGCAGATGGAAGCCACAAGCGCAGCCACCG...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CCA 90 bp AAGACTCTGAAGTGGCATAGCCAGTGGAAATTAACAGCTGTGTCCACTCTGGGCTCCCTGGCAGCTCCTTaGCCTTGCCCTTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: KTLKWHSQWKLTAVSTLGSLAAP*PCPCPP
Trigger: TGGTGGACAAGGGCAAGGCCAAGGAGCTGCCAGGGA...GCCCAGAGTGGACACAGCTGTTAATTTCCACTGGCTATGCCACTTCAGAGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGAACAACTCGTTCATCTaGCCCAGGAGCACCACGTTG +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVNNSFI*PRSTTL
Trigger: CAACGTGGTGCTCCTGGGCCAGATGAACGAGTTGTT...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGCAGGGCACTTTCTCCTaGGTTACCTTCCAATCCAGC +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVQGTFS*VTFQSS
Trigger: GCTGGATTGGAAGGTAACCCAGGAGAAAGTGCCCTG...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CCA 90 bp AGCCCACTGTGGCCCCCAGAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTGTGTGTGTGGTCTTGTaGCTCTTCCTAAGTCTCAAT +
Preference number: 4 (lower is better)
Translates to: SPLWPPERHHCPYLECDPVCVVL*LFLSLN
Trigger: ATTGAGACTTAGGAAGAGCCACAAGACCACACACAC...AGGATCACACTCCAAGTATGGGCAGTGATGGCGCTCTGGGGGCCACAGTGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp CCAGCCATGGCTGTGAAGGCCAGTCAACAAAGGGAAGATTTTACCCAGAGGAGCGAAGAGGTGGCCCATTaGCTGGGTTTTGGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: PAMAVKASQQREDFTQRSEEVAH*LGFGGV
Trigger: CACACCACCAAAACCCAGCCAATGGGCCACCTCTTC...GCTCCTCTGGGTAAAATCTTCCCTTTGTTGACTGGCCTTCACAGCCATGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp TGGACAGTGTGGTCAGGAATCGTCCCACCCAAGGAACCAGACACATACTCGGTCCTAGCTATTTGGGGATaGCAGGGGAAGCATCTCCCA +
Preference number: 4 (lower is better)
Translates to: WTVWSGIVPPKEPDTYSVLAIWG*QGKHLP
Trigger: TGGGAGATGCTTCCCCTGCCATCCCCAAATAGCTAG...GACCGAGTATGTGTCTGGTTCCTTGGGTGGGACGATTCCTGACCACACTGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTGTCCTTCATGTACTaGACACACACCTTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRVSFMY*THTLAG
Trigger: GCCCGCCAAGGTGTGTGTCCAGTACATGAAGGACAC...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381074.8
CDS-3UTR CCA 90 bp GGAAATAAAATGGACTTGCGGGGGAAAGAAGATGCTTGTCTCTCATGTCTGTCTTCAGCCGTGCAGGCTTaGCCCCCACCCAGAGGAGCG +
Preference number: 4 (lower is better)
Translates to: GNKMDLRGKEDACLSCLSSAVQA*PPPRGA
Trigger: CGCTCCTCTGGGTGGGGGCCAAGCCTGCACGGCTGA...AGACAGACATGAGAGACAAGCATCTTCTTTCCCCCGCAAGTCCATTTTATTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433363.7
3UTR CAA 72 bp TCGATTAAAACAGAACCAAGTGATGAAGGGCGTAGGTaGGCCTGTGGTGCACTGTGGGTGGCAAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SIKTEPSDEGRR*ACGALWVASQV
Trigger: CACCTGGCTTGCCACCCACAGTGCACCACAGGCCAACCTACGCCCTTCATCACTTGGTTCTGTTTTAATCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGCCTTCAAAAATCACTTaGCTCCCTGGCAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVPSKIT*LPGSSL
Trigger: CAAGGAGCTGCCAGGGAGTCAAGTGATTTTTGAAGG...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR TCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGTCTGTGAAGGCACAATaGATAGCAGGGTGGCCACAA +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVSVKAQ*IAGWPQ
Trigger: TTGTGGCCACCCTGCTATTCATTGTGCCTTCACAGA...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR TCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGGCCCAGTCAGGGAAATaGTCCAAGTCAAATATGGCC +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVAQSGK*SKSNMA
Trigger: GGCCATATTTGACTTGGATCATTTCCCTGACTGGGC...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR TCA 90 bp TTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACGATCCTCTGTTGTCACCACGTCTCGGCAAATGTTaGCCCAGACAACAGGGGACC +
Preference number: 4 (lower is better)
Translates to: LLRDHQALLNLNDPLLSPRLGKC*PRQQGT
Trigger: GGTCCCCTGTTGTCTGGGTCAACATTTGCCGAGACG...TGGTGACAACAGAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp TGGACAGTGTGGTCAGGAATCGTCCCACCCAAGGAACCAGACACATACTCGGTCTGGCATGAAAGACTCTaGAGTGGCATAGCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: WTVWSGIVPPKEPDTYSVWHERL*SGIASG
Trigger: TCCACTGGCTATGCCACTTCAGAGTCTTTCATGCCA...GACCGAGTATGTGTCTGGTTCCTTGGGTGGGACGATTCCTGACCACACTGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp AAGACTCTGAAGTGGCATAGCCAGTGGAAATTAACAGCTGTGTCCACTCTGGGCGCAGGGGTTGTTTGCTaGGAGATCACCAAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: KTLKWHSQWKLTAVSTLGAGVVC*EITKRC
Trigger: GCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGC...GCCCAGAGTGGACACAGCTGTTAATTTCCACTGGCTATGCCACTTCAGAGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp TGTGGCCCCCAGAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTCTTGATGGGGTTTCCTaGGGCTCTCATACTTTCTCC +
Preference number: 4 (lower is better)
Translates to: CGPQSAITAHTWSVILAILDGVS*GSHTFS
Trigger: GGAGAAAGTATGAGAGCCTCAGGAAACCCCATCAAG...AATAGCTAGGATCACACTCCAAGTATGGGCAGTGATGGCGCTCTGGGGGCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp CAACGATCCTCTGTTGTCACCAGCCATGGCTGTGAAGGCCAGTCAACAAAGGGATACTGGACACACACCTaGCTGGAGTCCAGAATCTGG +
Preference number: 4 (lower is better)
Translates to: QRSSVVTSHGCEGQSTKGYWTHT*LESRIW
Trigger: CCAGATTCTGGACTCCAGGCAGGTGTGTGTCCAGTA...TCCCTTTGTTGACTGGCCTTCACAGCCATGGCTGGTGACAACAGAGGATCGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp TGCCATCCAGGAGCTCATCTCTTTGCTACTGCCTCTCTTCCAGAGCAGCACAAGGTGGCTTCCATCTGCTaGAATATGGCCTCCACGATG +
Preference number: 4 (lower is better)
Translates to: CHPGAHLFATASLPEQHKVASIC*NMASTM
Trigger: CATCGTGGAGGCCATATTGCAGCAGATGGAAGCCAC...CTTGTGCTGCTCTGGAAGAGAGGCAGTAGCAAAGAGATGAGCTCCTGGATGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp TGGGGTTTCCTGAGGCTCTCATACTTTCTCCTGCCCTGGAAAATGCCATCCAGGGTGGCTTCCATCTGCTaGAATATGGCCTCCACGATG +
Preference number: 4 (lower is better)
Translates to: WGFLRLSYFLLPWKMPSRVASIC*NMASTM
Trigger: CATCGTGGAGGCCATATTGCAGCAGATGGAAGCCAC...CCTGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTGGCTTCCATCTGCTaGAATATGGCCTCCACGATG +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRVASIC*NMASTM
Trigger: CATCGTGGAGGCCATATTGCAGCAGATGGAAGCCAC...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR GCA 90 bp CACAGCCAGGCGAACAGCAGCATCACCAGCATGTTGGGAAAGGCAAATGCAAACCTTGTGGCTTCCATCTaGTGCAATATGGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: HSQANSSITSMLGKANANLVASI*CNMAST
Trigger: CGTGGAGGCCATATTGCAGCAGATGGAAGCCACAAG...GTTTGCATTTGCCTTTCCCAACATGCTGGTGATGCTGCTGTTCGCCTGGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR GCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGCTTGTGGCTTCCATCTaGTGCAATATGGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRLVASI*CNMAST
Trigger: CGTGGAGGCCATATTGCAGCAGATGGAAGCCACAAG...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR GCA 90 bp AGGGAAGATTTTACCCAGAGGAGCTCAAACGCTGGCATGAAAGACTCTGAAGTGGATCAAGGTGATGGCTaGCGGGGGCACTGCGTGCAA +
Preference number: 4 (lower is better)
Translates to: REDFTQRSSNAGMKDSEVDQGDG*RGHCVQ
Trigger: TTGCACGCAGTGCCCCCGGCAGCCATCACCTTGATC...CACTTCAGAGTCTTTCATGCCAGCGTTTGAGCTCCTCTGGGTAAAATCTTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp CCAGCCATGGCTGTGAAGGCCAGTCAACAAAGGGAAGATTTTACCCAGAGGAGCCCAGAGCGCCATCACTaGCCATACTTGGAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: PAMAVKASQQREDFTQRSPERHH*PYLECD
Trigger: ATCACACTCCAAGTATGGGCAGTGATGGCGCTCTGG...GCTCCTCTGGGTAAAATCTTCCCTTTGTTGACTGGCCTTCACAGCCATGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGCCTCTCTGGAGTTGTTaGCCCACTTTGGGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRPLWSC*PTLGSL
Trigger: CAAAGACCCCAAAGTGGGGCAACAACTCCAGAGAGG...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp TGGACAGTGTGGTCAGGAATCGTCCCACCCAAGGAACCAGACACATACTCGGTCGCGGGGGAAAGAAGATaGTTGTCTCTCATGTCTGTC +
Preference number: 4 (lower is better)
Translates to: WTVWSGIVPPKEPDTYSVAGERR*LSLMSV
Trigger: GACAGACATGAGAGACAAGCATCTTCTTTCCCCCGC...GACCGAGTATGTGTCTGGTTCCTTGGGTGGGACGATTCCTGACCACACTGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTTGGGGATGGCAGTGTCCTTCATGTACTaGACACACACCTGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: ERHHCPYLECDPSYLGMAVSFMY*THTCLE
Trigger: CTCCAGGCAGGTGTGTGTCCAGTACATGAAGGACAC...TGCCATCCCCAAATAGCTAGGATCACACTCCAAGTATGGGCAGTGATGGCGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTGTCCTTCATGTACTaGACACACACCTGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRVSFMY*THTCLE
Trigger: CTCCAGGCAGGTGTGTGTCCAGTACATGAAGGACAC...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293800.10
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CCA 90 bp AGTAGATTGGCCCACGGGCAGGGGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCCAGGAACAGCATGTTaGTGTCCTTCATGTACTGGA +
Preference number: 4 (lower is better)
Translates to: SRLAHGQGLFAERSPSAAPGTAC*CPSCTG
Trigger: TCCAGTACATGAAGGACACCAACATGCTGTTCCTGG...AGCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGCCCGTGGGCCAATCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGAGATGCACAGGGTCATaGCCTTACACAACCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVRCTGS*PYTTSS
Trigger: GGAAGAGGTTGTGTAAGGCCATGACCCTGTGCATCT...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CCA 90 bp TGTGGCCCCCAGAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTAGATGCACAGGGTCATaGCCTTACACAACCTCTTCC +
Preference number: 4 (lower is better)
Translates to: CGPQSAITAHTWSVILAIRCTGS*PYTTSS
Trigger: GGAAGAGGTTGTGTAAGGCCATGACCCTGTGCATCT...AATAGCTAGGATCACACTCCAAGTATGGGCAGTGATGGCGCTCTGGGGGCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGAACAACTCGTTCATCTaGCCCAGGAGCACCACGTTG +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRNNSFI*PRSTTL
Trigger: CAACGTGGTGCTCCTGGGCCAGATGAACGAGTTGTT...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CCA 90 bp CGTAGCAGATGCACAGGGTCATGGCCTTACACAACCTCTTCCGCTCTTGGTCTTAACAACTCGTTCATCTaGCCCAGGAGCACCACGTTG +
Preference number: 4 (lower is better)
Translates to: RSRCTGSWPYTTSSALGLNNSFI*PRSTTL
Trigger: CAACGTGGTGCTCCTGGGCCAGATGAACGAGTTGTT...AAGACCAAGAGCGGAAGAGGTTGTGTAAGGCCATGACCCTGTGCATCTGCTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR CCA 90 bp GCCCACGGGCAGGGGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAAGCATCACCAGCATGTTaGGAAAGGCAAATGCAAACC +
Preference number: 4 (lower is better)
Translates to: AHGQGLFAERSPSAAQSQASPAC*ERQMQT
Trigger: GGTTTGCATTTGCCTTTCCCAACATGCTGGTGATGC...TTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGCCCGTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACGATCCTCTGTTGGGGTGGCCACAAAGATaGCCACAGTGGCATCGGAGA +
Preference number: 4 (lower is better)
Translates to: GCLLRDHQALLNLNDPLLGWPQR*PQWHRR
Trigger: TCTCCGATGCCACTGTGGCCATCTTTGTGGCCACCC...CAACAGAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGCAGGGCACTTTCTCCTaGGTTACCTTCCAATCCAGC +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRQGTFS*VTFQSS
Trigger: GCTGGATTGGAAGGTAACCCAGGAGAAAGTGCCCTG...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CCA 90 bp GGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACGATCCTCTGTTGCTCGCACTCCAGCAGTaGGAGGTTGCTCAAGACCAG +
Preference number: 4 (lower is better)
Translates to: GCLLRDHQALLNLNDPLLLALQQ*EVAQDQ
Trigger: CTGGTCTTGAGCAACCTCCCACTGCTGGAGTGCGAG...CAACAGAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTTGGGGATGGCATTCCTCATCCTTTGGTaGTGGCCACAGGAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: ERHHCPYLECDPSYLGMAFLILW*WPQEEF
Trigger: GAACTCCTCCTGTGGCCACCACCAAAGGATGAGGAA...TGCCATCCCCAAATAGCTAGGATCACACTCCAAGTATGGGCAGTGATGGCGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTTGGGGATGGCAAGATTCCTCATCCTTTaGTGGTGGCCACAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: ERHHCPYLECDPSYLGMARFLIL*WWPQEE
Trigger: CTCCTCCTGTGGCCACCACCAAAGGATGAGGAATCT...TGCCATCCCCAAATAGCTAGGATCACACTCCAAGTATGGGCAGTGATGGCGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGGTGATCCTAGCTATTTaGGGATGGCAGGGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVVILAI*GWQGKH
Trigger: ATGCTTCCCCTGCCATCCCCAAATAGCTAGGATCAC...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GCCCACGGGCAGGGGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAAAATGAGAGCAAGAGCTaGACAGTGTGGTCAGGAATC +
Preference number: 4 (lower is better)
Translates to: AHGQGLFAERSPSAAQSQNESKS*TVWSGI
Trigger: GATTCCTGACCACACTGTCCAGCTCTTGCTCTCATT...TTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGCCCGTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp TGGCCGCGTAGCAGATGCACAGGGTCATGGCCTTACACAACCTCTTCCGCTCTTTACTGGACACACACCTaGAGTCCAGAATCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: WPRSRCTGSWPYTTSSALYWTHT*SPESGR
Trigger: TCTTCCAGATTCTGGACTCCAGGTGTGTGTCCAGTA...AAGAGCGGAAGAGGTTGTGTAAGGCCATGACCCTGTGCATCTGCTACGCGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572094.1
3UTR CAA 72 bp GATCACCAAGCGCTGCTCAATCTCAACGATCCTCTGTaGTCACCAGCCATGGCTGTGAAGGCCAGTCAACAA +
Preference number: 4 (lower is better)
Translates to: DHQALLNLNDPL*SPAMAVKASQQ
Trigger: TTGTTGACTGGCCTTCACAGCCATGGCTGGTGACAACAGAGGATCGTTGAGATTGAGCAGCGCTTGGTGATC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR CAA 72 bp CGAGTAACTTCAAGTAGATTGGCCCACGGGCAGGGGTaGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCT +
Preference number: 4 (lower is better)
Translates to: RVTSSRLAHGQG*FAERSPSAAQS
Trigger: AGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGCCCGTGGGCCAATCTACTTGAAGTTACTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR CAA 72 bp TCGTCCCACCCAAGGAACCAGACACATACTCGGTCCTaGATGGGGTTTCCTGAGGCTCTCATACTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SSHPRNQTHTRS*MGFPEALILSP
Trigger: AGGAGAAAGTATGAGAGCCTCAGGAAACCCCATCAAGGACCGAGTATGTGTCTGGTTCCTTGGGTGGGACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGTCTGTGAAGGCACAATaGATAGCAGGGTGGCCACAA +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRSVKAQ*IAGWPQ
Trigger: TTGTGGCCACCCTGCTATTCATTGTGCCTTCACAGA...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR TCA 90 bp GGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACGATCCTCTGTTGTGCTTGTGCACTCAGTaGACACGGCAACGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: GCLLRDHQALLNLNDPLLCLCTQ*TRQRAR
Trigger: CCTTGCTCGTTGCCGTGTTCACTGAGTGCACAAGCA...CAACAGAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp CAATGGCTACAGGTCTGGATGTTCCGTGGCATTCCCAAGTCACATGACATCGTTTGCTTGTGCACTCAGTaGACACGGCAACGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: QWLQVWMFRGIPKSHDIVCLCTQ*TRQRAR
Trigger: CCTTGCTCGTTGCCGTGTTCACTGAGTGCACAAGCA...AACGATGTCATGTGACTTGGGAATGCCACGGAACATCCAGACCTGTAGCCATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570687.1
CDS-3UTR TCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGCCCAGTCAGGGAAATaGTCCAAGTCAAATATGGCC +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRAQSGK*SKSNMA
Trigger: GGCCATATTTGACTTGGATCATTTCCCTGACTGGGC...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR TCA 90 bp AAGACTCTGAAGTGGCATAGCCAGTGGAAATTAACAGCTGTGTCCACTCTGGGCCACATACTCGGTCCTTaGTGGGGTTTCCTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: KTLKWHSQWKLTAVSTLGHILGP*WGFLRL
Trigger: GAGCCTCAGGAAACCCCATCAAGGACCGAGTATGTG...GCCCAGAGTGGACACAGCTGTTAATTTCCACTGGCTATGCCACTTCAGAGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGAGTTCACGAGGTCCTTaGTGTCAGGAAACAACTCGT +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVSSRGP*CQETTR
Trigger: ACGAGTTGTTTCCTGACAGCAAGGACCTCGTGAACT...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR GCA 90 bp ACCCAGACAACAGGGGACCAAGGAGTTGAAGGAGGCTCACTGGAGAGGTGGGACGTTGGGAAAGGCAAATaGAAACCAGGAAGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: TQTTGDQGVEGGSLERWDVGKGK*KPGSKV
Trigger: AACTTTGCTTCCTGGTTTGCATTTGCCTTTCCCAAC...GTCCCACCTCTCCAGTGAGCCTCCTTCAACTCCTTGGTCCCCTGTTGTCTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp GTGTGGTCAGGAATCGTCCCACCCAAGGAACCAGACACATACTCGGTCCTTGATGAGATCACCAAGCGCTaGTCAATCTCAACGATCCTC +
Preference number: 4 (lower is better)
Translates to: VWSGIVPPKEPDTYSVLDEITKR*SISTIL
Trigger: GAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTC...ATCAAGGACCGAGTATGTGTCTGGTTCCTTGGGTGGGACGATTCCTGACCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp GTGGCCCATTGGCTGGGTTTTGGTGGTGTGTGGACATCGTTGGGTCATTTTGGGAGGAGCTCATCTCTTTaGTACTGCCTCTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: VAHWLGFGGVWTSLGHFGRSSSL*YCLSSR
Trigger: TCTGGAAGAGAGGCAGTAGCAAAGAGATGAGCTCCT...CCCAAAATGACCCAACGATGTCCACACACCACCAAAACCCAGCCAATGGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp TTGGGAAAGGCAAATGCAAACCAGGAAGCAAAGTTCACGAGGTCCTTGCTGTCACATCAGAATGACGAGTaGCAGCAGCAGGAGCGGGGT +
Preference number: 4 (lower is better)
Translates to: LGKANANQEAKFTRSLLSHQNDE*QQQERG
Trigger: ACCCCGCTCCTGCTGCTGCCACTCGTCATTCTGATG...TGACAGCAAGGACCTCGTGAACTTTGCTTCCTGGTTTGCATTTGCCTTTCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR CCA 90 bp AGGGAAGATTTTACCCAGAGGAGCTCAAACGCTGGCATGAAAGACTCTGAAGTGGCACCATCATGGCCGTaGTTGCCGTGTTACGTGCAG +
Preference number: 4 (lower is better)
Translates to: REDFTQRSSNAGMKDSEVAPSWP*LPCYVQ
Trigger: CTGCACGTAACACGGCAACCACGGCCATGATGGTGC...CACTTCAGAGTCTTTCATGCCAGCGTTTGAGCTCCTCTGGGTAAAATCTTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293800.10
CDS-3UTR CCA 90 bp GTTGGGAAAGGCAAATGCAAACCAGGAAGCAAAGTTCACGAGGTCCTTGCTGTCAATCACTTGACTCCCTaGCAGCTCCTTGGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: VGKGKCKPGSKVHEVLAVNHLTP*QLLGLA
Trigger: GGCAAGGCCAAGGAGCTGCCAGGGAGTCAAGTGATT...GACAGCAAGGACCTCGTGAACTTTGCTTCCTGGTTTGCATTTGCCTTTCCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR CCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGAGATGCACAGGGTCATaGCCTTACACAACCTCTTCC +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRRCTGS*PYTTSS
Trigger: GGAAGAGGTTGTGTAAGGCCATGACCCTGTGCATCT...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGGCATCACCAGCATGTTaGGAAAGGCAAATGCAAACC +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVASPAC*ERQMQT
Trigger: GGTTTGCATTTGCCTTTCCCAACATGCTGGTGATGC...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGCAAAGATGGCCACAGTaGCATCGGAGACATACTTTG +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVQRWPQ*HRRHTL
Trigger: CAAAGTATGTCTCCGATGCCACTGTGGCCATCTTTG...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CCA 90 bp TGGACAGTGTGGTCAGGAATCGTCCCACCCAAGGAACCAGACACATACTCGGTCCAAAGATGGCCACAGTaGCATCGGAGACATACTTTG +
Preference number: 4 (lower is better)
Translates to: WTVWSGIVPPKEPDTYSVQRWPQ*HRRHTL
Trigger: CAAAGTATGTCTCCGATGCCACTGTGGCCATCTTTG...GACCGAGTATGTGTCTGGTTCCTTGGGTGGGACGATTCCTGACCACACTGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GAAGGGACATGGGCACTGGTAGGTGGTTGTCTTAGCTCTCAACCAGGGGATCCGCTTTCTTCCTCAGTCTaGCTGCGGAAGTTAAACTTG +
Preference number: 4 (lower is better)
Translates to: EGTWALVGGCLSSQPGDPLSSSV*LRKLNL
Trigger: CAAGTTTAACTTCCGCAGCCAGACTGAGGAAGAAAG...CGGATCCCCTGGTTGAGAGCTAAGACAACCACCTACCAGTGCCCATGTCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GCCCACGGGCAGGGGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAAGGTTTTGGTGGTGTGTaGACATCGTTGGGTCATTTT +
Preference number: 4 (lower is better)
Translates to: AHGQGLFAERSPSAAQSQGFGGV*TSLGHF
Trigger: AAAATGACCCAACGATGTCCACACACCACCAAAACC...TTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGCCCGTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp AAATGCCATCCAGGAGCTCATCTCTTTGCTACTGCCTCTCTTCCAGAGCAGCACTTGGCTGGGTTTTGGTaGTGTGTGGACATCGTTGGG +
Preference number: 4 (lower is better)
Translates to: KCHPGAHLFATASLPEQHLAGFW*CVDIVG
Trigger: CCCAACGATGTCCACACACCACCAAAACCCAGCCAA...GTGCTGCTCTGGAAGAGAGGCAGTAGCAAAGAGATGAGCTCCTGGATGGCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACGATCCTCTGTTGAGGTGGCCCATTGGCTaGGTTTTGGTGGTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: GCLLRDHQALLNLNDPLLRWPIG*VLVVCG
Trigger: TCCACACACCACCAAAACCCAGCCAATGGGCCACCT...CAACAGAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp TTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACGATCCTCTGTTGTCACCAGCTTGGAGGAAGAGGTaGCCCATTGGCTGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: LLRDHQALLNLNDPLLSPAWRKR*PIGWVL
Trigger: CAAAACCCAGCCAATGGGCCACCTCTTCCTCCAAGC...TGGTGACAACAGAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACGATCCTCTGTTGGCTTGGAGGAAGAGGTaGCCCATTGGCTGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: GCLLRDHQALLNLNDPLLAWRKR*PIGWVL
Trigger: CAAAACCCAGCCAATGGGCCACCTCTTCCTCCAAGC...CAACAGAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp TGCCATCCAGGAGCTCATCTCTTTGCTACTGCCTCTCTTCCAGAGCAGCACAAGGATAATGGCAAGGCTTaGGAAAGATGGGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: CHPGAHLFATASLPEQHKDNGKA*ERWVQQ
Trigger: CTGCTGGACCCATCTTTCCCAAGCCTTGCCATTATC...CTTGTGCTGCTCTGGAAGAGAGGCAGTAGCAAAGAGATGAGCTCCTGGATGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GTGTGGTCAGGAATCGTCCCACCCAAGGAACCAGACACATACTCGGTCCTTGATGATAATGGCAAGGCTTaGGAAAGATGGGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: VWSGIVPPKEPDTYSVLDDNGKA*ERWVQQ
Trigger: CTGCTGGACCCATCTTTCCCAAGCCTTGCCATTATC...ATCAAGGACCGAGTATGTGTCTGGTTCCTTGGGTGGGACGATTCCTGACCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp AAGACTCTGAAGTGGCATAGCCAGTGGAAATTAACAGCTGTGTCCACTCTGGGCCTCATCCTTTGGTGGTaGCCACAGGAGGAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: KTLKWHSQWKLTAVSTLGLILWW*PQEEFP
Trigger: TGGGAACTCCTCCTGTGGCCACCACCAAAGGATGAG...GCCCAGAGTGGACACAGCTGTTAATTTCCACTGGCTATGCCACTTCAGAGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp TTTCCTGAGGCTCTCATACTTTCTCCTGCCCTGGAAAATGCCATCCAGGAGCTCTTCCTCATCCTTTGGTaGTGGCCACAGGAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: FPEALILSPALENAIQELFLILW*WPQEEF
Trigger: GAACTCCTCCTGTGGCCACCACCAAAGGATGAGGAA...GAGCTCCTGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTTGTTGCCCCACTTTaGGGTCTTTGTCCGAGTAAC +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRVVAPL*GLCPSN
Trigger: GTTACTCGGACAAAGACCCCAAAGTGGGGCAACAAC...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GTGGCCCATTGGCTGGGTTTTGGTGGTGTGTGGACATCGTTGGGTCATTTTGGGAATGAGAGCAAGAGCTaGACAGTGTGGTCAGGAATC +
Preference number: 4 (lower is better)
Translates to: VAHWLGFGGVWTSLGHFGNESKS*TVWSGI
Trigger: GATTCCTGACCACACTGTCCAGCTCTTGCTCTCATT...CCCAAAATGACCCAACGATGTCCACACACCACCAAAACCCAGCCAATGGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGCTCCTGTTTTCACCATaGAGGCAAAGATGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRLLFSP*RQRWAG
Trigger: TCCTGCCCATCTTTGCCTCCATGGTGAAAACAGGAG...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573648.5
CDS-3UTR TCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGAGATCACGAAGGACTTaGACTTGGAGACATAGCTCA +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVRSRRT*TWRHSS
Trigger: TGAGCTATGTCTCCAAGTTCAAGTCCTTCGTGATCT...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR TCA 90 bp AGGGAAGATTTTACCCAGAGGAGCTCAAACGCTGGCATGAAAGACTCTGAAGTGCCCGTCCCCAGGTGTTaGCAGCCAAAAACACACAGA +
Preference number: 4 (lower is better)
Translates to: REDFTQRSSNAGMKDSEVPVPRC*QPKTHR
Trigger: TCTGTGTGTTTTTGGCTGTCAACACCTGGGGACGGG...CACTTCAGAGTCTTTCATGCCAGCGTTTGAGCTCCTCTGGGTAAAATCTTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp AAATGCCATCCAGGAGCTCATCTCTTTGCTACTGCCTCTCTTCCAGAGCAGCACCTTGATGGGGTTTCCTaGGGCTCTCATACTTTCTCC +
Preference number: 4 (lower is better)
Translates to: KCHPGAHLFATASLPEQHLDGVS*GSHTFS
Trigger: GGAGAAAGTATGAGAGCCTCAGGAAACCCCATCAAG...GTGCTGCTCTGGAAGAGAGGCAGTAGCAAAGAGATGAGCTCCTGGATGGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp GGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACGATCCTCTGTTGTACTGGACACACACCTaGCTGGAGTCCAGAATCTGG +
Preference number: 4 (lower is better)
Translates to: GCLLRDHQALLNLNDPLLYWTHT*LESRIW
Trigger: CCAGATTCTGGACTCCAGGCAGGTGTGTGTCCAGTA...CAACAGAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp AAACCAGGAAGCAAAGTTCACGAGGTCCTTGCTGTCAGGAAACAACTCGTTCATTGGCCGCGTAGCAGATaGACAGGGTCATGGCCTTAC +
Preference number: 4 (lower is better)
Translates to: KPGSKVHEVLAVRKQLVHWPRSR*TGSWPY
Trigger: GTAAGGCCATGACCCTGTGCATCTGCTACGCGGCCA...ATGAACGAGTTGTTTCCTGACAGCAAGGACCTCGTGAACTTTGCTTCCTGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR GCA 90 bp GTGTGGTCAGGAATCGTCCCACCCAAGGAACCAGACACATACTCGGTCCTTGATAGTTCACGAGGTCCTTaGTGTCAGGAAACAACTCGT +
Preference number: 4 (lower is better)
Translates to: VWSGIVPPKEPDTYSVLDSSRGP*CQETTR
Trigger: ACGAGTTGTTTCCTGACAGCAAGGACCTCGTGAACT...ATCAAGGACCGAGTATGTGTCTGGTTCCTTGGGTGGGACGATTCCTGACCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp GGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACGATCCTCTGTTGCCTCTCTGGAGTTGTTaGCCCACTTTGGGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: GCLLRDHQALLNLNDPLLPLWSC*PTLGSL
Trigger: CAAAGACCCCAAAGTGGGGCAACAACTCCAGAGAGG...CAACAGAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp TTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACGATCCTCTGTTGTCACCATCCTGCCCTGGAAAATaGCATCCAGGAGCTCATCTC +
Preference number: 4 (lower is better)
Translates to: LLRDHQALLNLNDPLLSPSCPGK*HPGAHL
Trigger: GAGATGAGCTCCTGGATGGCATTTTCCAGGGCAGGA...TGGTGACAACAGAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACGATCCTCTGTTGGGACACACACCTGCCTaGAGTCCAGAATCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: GCLLRDHQALLNLNDPLLGHTPA*SPESGR
Trigger: TCTTCCAGATTCTGGACTCCAGGCAGGTGTGTGTCC...CAACAGAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGCCAGGAACAGCATGTTaGTGTCCTTCATGTACTGGA +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRPGTAC*CPSCTG
Trigger: TCCAGTACATGAAGGACACCAACATGCTGTTCCTGG...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CCA 90 bp AGGGAAGATTTTACCCAGAGGAGCTCAAACGCTGGCATGAAAGACTCTGAAGTGCGGTGGCTGCGCTTGTaGCTTCCATCTGCTGCAATA +
Preference number: 4 (lower is better)
Translates to: REDFTQRSSNAGMKDSEVRWLRL*LPSAAI
Trigger: TATTGCAGCAGATGGAAGCCACAAGCGCAGCCACCG...CACTTCAGAGTCTTTCATGCCAGCGTTTGAGCTCCTCTGGGTAAAATCTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp AGGGAAGATTTTACCCAGAGGAGCTCAAACGCTGGCATGAAAGACTCTGAAGTGAATCACTTGACTCCCTaGCAGCTCCTTGGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: REDFTQRSSNAGMKDSEVNHLTP*QLLGLA
Trigger: GGCAAGGCCAAGGAGCTGCCAGGGAGTCAAGTGATT...CACTTCAGAGTCTTTCATGCCAGCGTTTGAGCTCCTCTGGGTAAAATCTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp AAATGCCATCCAGGAGCTCATCTCTTTGCTACTGCCTCTCTTCCAGAGCAGCACAGATGCACAGGGTCATaGCCTTACACAACCTCTTCC +
Preference number: 4 (lower is better)
Translates to: KCHPGAHLFATASLPEQHRCTGS*PYTTSS
Trigger: GGAAGAGGTTGTGTAAGGCCATGACCCTGTGCATCT...GTGCTGCTCTGGAAGAGAGGCAGTAGCAAAGAGATGAGCTCCTGGATGGCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp TTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACGATCCTCTGTTGTCACCAAACAACTCGTTCATCTaGCCCAGGAGCACCACGTTG +
Preference number: 4 (lower is better)
Translates to: LLRDHQALLNLNDPLLSPNNSFI*PRSTTL
Trigger: CAACGTGGTGCTCCTGGGCCAGATGAACGAGTTGTT...TGGTGACAACAGAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGCATCACCAGCATGTTaGGAAAGGCAAATGCAAACC +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRASPAC*ERQMQT
Trigger: GGTTTGCATTTGCCTTTCCCAACATGCTGGTGATGC...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGCAAAGATGGCCACAGTaGCATCGGAGACATACTTTG +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRQRWPQ*HRRHTL
Trigger: CAAAGTATGTCTCCGATGCCACTGTGGCCATCTTTG...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGCTTTCTTCCTCAGTCTaGCTGCGGAAGTTAAACTTG +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVLSSSV*LRKLNL
Trigger: CAAGTTTAACTTCCGCAGCCAGACTGAGGAAGAAAG...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CCA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGGTGTGTGTGGTCTTGTaGCTCTTCCTAAGTCTCAAT +
Preference number: 4 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVVCVVL*LFLSLN
Trigger: ATTGAGACTTAGGAAGAGCCACAAGACCACACACAC...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CCA 90 bp AAGACTCTGAAGTGGCATAGCCAGTGGAAATTAACAGCTGTGTCCACTCTGGGCTTGGCTGGGTTTTGGTaGTGTGTGGACATCGTTGGG +
Preference number: 4 (lower is better)
Translates to: KTLKWHSQWKLTAVSTLGLAGFW*CVDIVG
Trigger: CCCAACGATGTCCACACACCACCAAAACCCAGCCAA...GCCCAGAGTGGACACAGCTGTTAATTTCCACTGGCTATGCCACTTCAGAGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACGATCCTCTGTTGAGATTCCTCATCCTTTaGTGGTGGCCACAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GCLLRDHQALLNLNDPLLRFLIL*WWPQEE
Trigger: CTCCTCCTGTGGCCACCACCAAAGGATGAGGAATCT...CAACAGAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GTGGCCCATTGGCTGGGTTTTGGTGGTGTGTGGACATCGTTGGGTCATTTTGGGAAGTGGCATAGCCAGTaGAAATTAACAGCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: VAHWLGFGGVWTSLGHFGKWHSQ*KLTAVS
Trigger: GGACACAGCTGTTAATTTCCACTGGCTATGCCACTT...CCCAAAATGACCCAACGATGTCCACACACCACCAAAACCCAGCCAATGGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR CAA 72 bp CACTTTGGGGTCTTTGTCCGAGTAACTTCAAGTAGATaGGCCCACGGGCAGGGGTTGTTTGCTGAGAGATCA +
Preference number: 4 (lower is better)
Translates to: HFGVFVRVTSSR*AHGQGLFAERS
Trigger: TGATCTCTCAGCAAACAACCCCTGCCCGTGGGCCAATCTACTTGAAGTTACTCGGACAAAGACCCCAAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
3UTR CAA 72 bp GCAAATGCAAACCAGGAAGCAAAGTTCACGAGGTCCTaGCTGTCAGGAAACAACTCGTTCATCTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: ANANQEAKFTRS*LSGNNSFIWPR
Trigger: CCTGGGCCAGATGAACGAGTTGTTTCCTGACAGCAAGGACCTCGTGAACTTTGCTTCCTGGTTTGCATTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR TCA 90 bp GAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTTGGGGATGGCAAGATCACGAAGGACTTaGACTTGGAGACATAGCTCA +
Preference number: 4 (lower is better)
Translates to: ERHHCPYLECDPSYLGMARSRRT*TWRHSS
Trigger: TGAGCTATGTCTCCAAGTTCAAGTCCTTCGTGATCT...TGCCATCCCCAAATAGCTAGGATCACACTCCAAGTATGGGCAGTGATGGCGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp TGGGGTTTCCTGAGGCTCTCATACTTTCTCCTGCCCTGGAAAATGCCATCCAGGAGATCACGAAGGACTTaGACTTGGAGACATAGCTCA +
Preference number: 4 (lower is better)
Translates to: WGFLRLSYFLLPWKMPSRRSRRT*TWRHSS
Trigger: TGAGCTATGTCTCCAAGTTCAAGTCCTTCGTGATCT...CCTGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGAGATCACGAAGGACTTaGACTTGGAGACATAGCTCA +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRRSRRT*TWRHSS
Trigger: TGAGCTATGTCTCCAAGTTCAAGTCCTTCGTGATCT...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR TCA 90 bp GGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACGATCCTCTGTTGTCTGTGAAGGCACAATaGATAGCAGGGTGGCCACAA +
Preference number: 4 (lower is better)
Translates to: GCLLRDHQALLNLNDPLLSVKAQ*IAGWPQ
Trigger: TTGTGGCCACCCTGCTATTCATTGTGCCTTCACAGA...CAACAGAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp AAGACTCTGAAGTGGCATAGCCAGTGGAAATTAACAGCTGTGTCCACTCTGGGCGCTCAAACGCTGGCATaGAAGACTCTGAAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: KTLKWHSQWKLTAVSTLGAQTLA*KTLKWH
Trigger: ATGCCACTTCAGAGTCTTTCATGCCAGCGTTTGAGC...GCCCAGAGTGGACACAGCTGTTAATTTCCACTGGCTATGCCACTTCAGAGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp CAATGGCTACAGGTCTGGATGTTCCGTGGCATTCCCAAGTCACATGACATCGTTATGGGGCATCCCTTATaGCAACAGCGTTATAGTCCG +
Preference number: 4 (lower is better)
Translates to: QWLQVWMFRGIPKSHDIVMGHPL*QQRYSP
Trigger: CGGACTATAACGCTGTTGTCATAAGGGATGCCCCAT...AACGATGTCATGTGACTTGGGAATGCCACGGAACATCCAGACCTGTAGCCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570687.1
CDS-3UTR GCA 90 bp TGGGGTTTCCTGAGGCTCTCATACTTTCTCCTGCCCTGGAAAATGCCATCCAGGTCTCATACTTTCTCCTaGCCTGGAAAATGCCATCCA +
Preference number: 4 (lower is better)
Translates to: WGFLRLSYFLLPWKMPSRSHTFS*PGKCHP
Trigger: TGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGA...CCTGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp AAATGCCATCCAGGAGCTCATCTCTTTGCTACTGCCTCTCTTCCAGAGCAGCACGCATCACCAGCATGTTaGGAAAGGCAAATGCAAACC +
Preference number: 4 (lower is better)
Translates to: KCHPGAHLFATASLPEQHASPAC*ERQMQT
Trigger: GGTTTGCATTTGCCTTTCCCAACATGCTGGTGATGC...GTGCTGCTCTGGAAGAGAGGCAGTAGCAAAGAGATGAGCTCCTGGATGGCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp TGGGGTTTCCTGAGGCTCTCATACTTTCTCCTGCCCTGGAAAATGCCATCCAGGCTTTCTTCCTCAGTCTaGCTGCGGAAGTTAAACTTG +
Preference number: 4 (lower is better)
Translates to: WGFLRLSYFLLPWKMPSRLSSSV*LRKLNL
Trigger: CAAGTTTAACTTCCGCAGCCAGACTGAGGAAGAAAG...CCTGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGCTTTCTTCCTCAGTCTaGCTGCGGAAGTTAAACTTG +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRLSSSV*LRKLNL
Trigger: CAAGTTTAACTTCCGCAGCCAGACTGAGGAAGAAAG...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTGTGTGTGGTCTTGTaGCTCTTCCTAAGTCTCAAT +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRVCVVL*LFLSLN
Trigger: ATTGAGACTTAGGAAGAGCCACAAGACCACACACAC...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGGTTTTGGTGGTGTGTaGACATCGTTGGGTCATTTT +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRGFGGV*TSLGHF
Trigger: AAAATGACCCAACGATGTCCACACACCACCAAAACC...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGAAGTGGCATAGCCAGTaGAAATTAACAGCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRKWHSQ*KLTAVS
Trigger: GGACACAGCTGTTAATTTCCACTGGCTATGCCACTT...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp TTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACGATCCTCTGTTGTCACCAAGTTCACGAGGTCCTTaGTGTCAGGAAACAACTCGT +
Preference number: 4 (lower is better)
Translates to: LLRDHQALLNLNDPLLSPSSRGP*CQETTR
Trigger: ACGAGTTGTTTCCTGACAGCAAGGACCTCGTGAACT...TGGTGACAACAGAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTTGGGAAAGGCAAATaGAAACCAGGAAGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRVGKGK*KPGSKV
Trigger: AACTTTGCTTCCTGGTTTGCATTTGCCTTTCCCAAC...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CCA 90 bp GGAAATAAAATGGACTTGCGGGGGAAAGAAGATGCTTGTCTCTCATGTCTGTCTCCATCTGCTGCAATATaGCCTCCACGATGGGCACCA +
Preference number: 4 (lower is better)
Translates to: GNKMDLRGKEDACLSCLSPSAAI*PPRWAP
Trigger: TGGTGCCCATCGTGGAGGCCATATTGCAGCAGATGG...AGACAGACATGAGAGACAAGCATCTTCTTTCCCCCGCAAGTCCATTTTATTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GGAAATAAAATGGACTTGCGGGGGAAAGAAGATGCTTGTCTCTCATGTCTGTCTGAAGAGGTGGCCCATTaGCTGGGTTTTGGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: GNKMDLRGKEDACLSCLSEEVAH*LGFGGV
Trigger: CACACCACCAAAACCCAGCCAATGGGCCACCTCTTC...AGACAGACATGAGAGACAAGCATCTTCTTTCCCCCGCAAGTCCATTTTATTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp AGGGAAGATTTTACCCAGAGGAGCTCAAACGCTGGCATGAAAGACTCTGAAGTGGTTGTTGCCCCACTTTaGGGTCTTTGTCCGAGTAAC +
Preference number: 4 (lower is better)
Translates to: REDFTQRSSNAGMKDSEVVVAPL*GLCPSN
Trigger: GTTACTCGGACAAAGACCCCAAAGTGGGGCAACAAC...CACTTCAGAGTCTTTCATGCCAGCGTTTGAGCTCCTCTGGGTAAAATCTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GAAAGGCAAATGCAAACCAGGAAGCAAAGTTCACGAGGTCCTTGCTGTCAGGAAGTGTCCTTCATGTACTaGACACACACCTGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: ERQMQTRKQSSRGPCCQEVSFMY*THTWSP
Trigger: TGGACTCCAGGTGTGTGTCCAGTACATGAAGGACAC...TTCCTGACAGCAAGGACCTCGTGAACTTTGCTTCCTGGTTTGCATTTGCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR GCA 90 bp AGGGAAGATTTTACCCAGAGGAGCTCAAACGCTGGCATGAAAGACTCTGAAGTGAGGAGCTCATCTCTTTaGTACTGCCTCTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: REDFTQRSSNAGMKDSEVRSSSL*YCLSSR
Trigger: TCTGGAAGAGAGGCAGTAGCAAAGAGATGAGCTCCT...CACTTCAGAGTCTTTCATGCCAGCGTTTGAGCTCCTCTGGGTAAAATCTTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CCA 90 bp GCAGCATCACCAGCATGTTGGGAAAGGCAAATGCAAACCAGGAAGCAAAGTTCACCAGGAACAGCATGTTaGTGTCCTTCATGTACTGGA +
Preference number: 4 (lower is better)
Translates to: AASPACWERQMQTRKQSSPGTAC*CPSCTG
Trigger: TCCAGTACATGAAGGACACCAACATGCTGTTCCTGG...TGAACTTTGCTTCCTGGTTTGCATTTGCCTTTCCCAACATGCTGGTGATGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR CCA 90 bp ATTATAAATGTCAACAATGGCTACAGGTCTGGATGTTCCGTGGCATTCCCAAGTCGATGGAGCGAGACATaGAGGCAAAGATGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: IINVNNGYRSGCSVAFPSRWSET*RQRWAG
Trigger: TCCTGCCCATCTTTGCCTCCATGTCTCGCTCCATCG...ACTTGGGAATGCCACGGAACATCCAGACCTGTAGCCATTGTTGACATTTATAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570687.1
CDS-3UTR TCA 90 bp GGAAATAAAATGGACTTGCGGGGGAAAGAAGATGCTTGTCTCTCATGTCTGTCTGCCCAGTCAGGGAAATaGTCCAAGTCAAATATGGCC +
Preference number: 4 (lower is better)
Translates to: GNKMDLRGKEDACLSCLSAQSGK*SKSNMA
Trigger: GGCCATATTTGACTTGGATCATTTCCCTGACTGGGC...AGACAGACATGAGAGACAAGCATCTTCTTTCCCCCGCAAGTCCATTTTATTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR TCA 90 bp AACAATGGCTACAGGTCTGGATGTTCCGTGGCATTCCCAAGTCACATGACATCGCATTCCCAAGTCACATaGCATCGTTTTGAAACTCTG +
Preference number: 4 (lower is better)
Translates to: NNGYRSGCSVAFPSHMTSHSQVT*HRFETL
Trigger: CAGAGTTTCAAAACGATGTCATGTGACTTGGGAATG...CGATGTCATGTGACTTGGGAATGCCACGGAACATCCAGACCTGTAGCCATTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570687.1
CDS-3UTR GCA 90 bp GGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACGATCCTCTGTTGGTTGGGAAAGGCAAATaGAAACCAGGAAGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: GCLLRDHQALLNLNDPLLVGKGK*KPGSKV
Trigger: AACTTTGCTTCCTGGTTTGCATTTGCCTTTCCCAAC...CAACAGAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR GCA 90 bp ACCAGCATGTTGGGAAAGGCAAATGCAAACCAGGAAGCAAAGTTCACGAGGTCCGTTGGGAAAGGCAAATaGAAACCAGGAAGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: TSMLGKANANQEAKFTRSVGKGK*KPGSKV
Trigger: AACTTTGCTTCCTGGTTTGCATTTGCCTTTCCCAAC...GGACCTCGTGAACTTTGCTTCCTGGTTTGCATTTGCCTTTCCCAACATGCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR CCA 90 bp ATTATAAATGTCAACAATGGCTACAGGTCTGGATGTTCCGTGGCATTCCCAAGTCAATGGCTACAGGTCTaGATGTTCCGTGGCATTCCC +
Preference number: 4 (lower is better)
Translates to: IINVNNGYRSGCSVAFPSQWLQV*MFRGIP
Trigger: GGGAATGCCACGGAACATCCAGACCTGTAGCCATTG...ACTTGGGAATGCCACGGAACATCCAGACCTGTAGCCATTGTTGACATTTATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570687.1
CDS-3UTR CCA 90 bp AACAATGGCTACAGGTCTGGATGTTCCGTGGCATTCCCAAGTCACATGACATCGTCTGTCATTCATAAATaGGGCATCCCTTATGACAAC +
Preference number: 4 (lower is better)
Translates to: NNGYRSGCSVAFPSHMTSSVIHK*GIPYDN
Trigger: GTTGTCATAAGGGATGCCCCATTTATGAATGACAGA...CGATGTCATGTGACTTGGGAATGCCACGGAACATCCAGACCTGTAGCCATTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570687.1
CDS-3UTR CCA 90 bp ATAAATGTCAACAATGGCTACAGGTCTGGATGTTCCGTGGCATTCCCAAGTCACTATAAATGTCAACAATaGCTACAGGTCTGGATGTTC +
Preference number: 4 (lower is better)
Translates to: INVNNGYRSGCSVAFPSHYKCQQ*LQVWMF
Trigger: GAACATCCAGACCTGTAGCCATTGTTGACATTTATA...GTGACTTGGGAATGCCACGGAACATCCAGACCTGTAGCCATTGTTGACATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570687.1
CDS GCA 90 bp GGAGGACAAAGGGTCGGCTCACTGGGCCTCGATGTCCCTGTGCCATaGTCTGTCCCTGGCTGGGGTGTCCCGACCCCCAGGACAGTGCGA +
Preference number: 5 (lower is better)
Translates to: GGQRVGSLGLDVPVP*SVPGWGVPTPRTVR
Trigger: TCGCACTGTCCTGGGGGTCGGGACACCCCAGCCAGGGACAGAGCATGGCACAGGGACATCGAGGCCCAGTGAGCCGACCCTTTGTCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS CCA 90 bp GGCTCACTGGGCCTCGATGTCCCTGTGCCATGCTCTGTCCCTGGCTaGGGTGTCCCGACCCCCAGGACAGTGCGACTTCATGTCCCCCAG +
Preference number: 5 (lower is better)
Translates to: GSLGLDVPVPCSVPG*GVPTPRTVRLHVPQ
Trigger: CTGGGGGACATGAAGTCGCACTGTCCTGGGGGTCGGGACACCCCAGCCAGGGACAGAGCATGGCACAGGGACATCGAGGCCCAGTGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS GCA 90 bp AGAGAGGAGGACAAAGGGTCGGCTCACTGGGCCTCGATGTCCCTGTaGCATGCTCTGTCCCTGGCTGGGGTGTCCCGACCCCCAGGACAG +
Preference number: 5 (lower is better)
Translates to: REEDKGSAHWASMSL*HALSLAGVSRPPGQ
Trigger: CTGTCCTGGGGGTCGGGACACCCCAGCCAGGGACAGAGCATGGCACAGGGACATCGAGGCCCAGTGAGCCGACCCTTTGTCCTCCTCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS-3UTR CAA 90 bp AGGCAGAGCGGGTACAGCAGCCTGCATCCTGATCCCTCGGCTACCTGGCCTCCCCTGTGTGGGGGATGCTaGAGGCAGAGCGGGTACAGC +
Preference number: 5 (lower is better)
Translates to: RQSGYSSLHPDPSATWPPLCGGC*RQSGYS
Trigger: GCTGTACCCGCTCTGCCTCAAGCATCCCCCACACAG...GGGAGGCCAGGTAGCCGAGGGATCAGGATGCAGGCTGCTGTACCCGCTCTGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp CCAGCATCAGCCGTGCAGGCTTGGCCCCCACCCAGAGGAGCGTGCGCAGGGCGACCCAGGAACAGCATGTaGGTGTCCTTCATGTACTGG +
Preference number: 5 (lower is better)
Translates to: PASAVQAWPPPRGACAGRPRNSM*VSFMYW
Trigger: CCAGTACATGAAGGACACCAACATGCTGTTCCTGGG...TCGCCCTGCGCACGCTCCTCTGGGTGGGGGCCAAGCCTGCACGGCTGATGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572094.1
ENST00000575230.1
CDS-3UTR CAA 90 bp ATCTCCGCGAAGGACAAGGGCCCCAGCTTCCGGTACTCCTCCTGCAGCACCTTGCGCAGGGCGATCCTCTaGTGCAGGTTCCAGCGCTCC +
Preference number: 5 (lower is better)
Translates to: ISAKDKGPSFRYSSCSTLRRAIL*CRFQRS
Trigger: GGAGCGCTGGAACCTGCACAAGAGGATCGCCCTGCG...CAAGGTGCTGCAGGAGGAGTACCGGAAGCTGGGGCCCTTGTCCTTCGCGGAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR CAA 90 bp CGCTCCACAGCCACGGCCACGATGAGGCCGCCCAGGAACAGCATGTTGGTGTCCGACTTCAGGGACAGCTaGGAGTGGGGATGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: RSTATATMRPPRNSMLVSDFRDS*EWGCRL
Trigger: GAGCCTGCATCCCCACTCCAAGCTGTCCCTGAAGTC...GGACACCAACATGCTGTTCCTGGGCGGCCTCATCGTGGCCGTGGCTGTGGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575230.1
CDS GCA 90 bp GGCAACGAGCAAGGACAAGATCAAGGTGATGGCTGCCGGGGGCACTaGGTGCAAGGGCTCCATCTGCTTCCCCATCCACACGGACAGCCC +
Preference number: 5 (lower is better)
Translates to: GNEQGQDQGDGCRGH*VQGLHLLPHPHGQP
Trigger: GGGCTGTCCGTGTGGATGGGGAAGCAGATGGAGCCCTTGCACGCAGTGCCCCCGGCAGCCATCACCTTGATCTTGTCCTTGCTCGTTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000572727.1
ENST00000573648.5
CDS CCA 90 bp CTGGGGACTAGTGCTCTCAGAGAGGAGGACAAAGGGTCGGCTCACTaGGCCTCGATGTCCCTGTGCCATGCTCTGTCCCTGGCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: LGTSALREEDKGSAH*ASMSLCHALSLAGV
Trigger: CACCCCAGCCAGGGACAGAGCATGGCACAGGGACATCGAGGCCCAGTGAGCCGACCCTTTGTCCTCCTCTCTGAGAGCACTAGTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS-3UTR CAA 90 bp CGTGCAGGCTTGGCCCCCACCCAGAGGAGCGTGCGCAGGGCGATCCTCTTGTGCCCCAGGAACAGCATGTaGGTGTCCTTCATGTACTGG +
Preference number: 5 (lower is better)
Translates to: RAGLAPTQRSVRRAILLCPRNSM*VSFMYW
Trigger: CCAGTACATGAAGGACACCAACATGCTGTTCCTGGG...GCACAAGAGGATCGCCCTGCGCACGCTCCTCTGGGTGGGGGCCAAGCCTGCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572094.1
ENST00000575230.1
CDS CCA 90 bp GCCCAGCTCTTCGCTGGCGCGTCTCCCCGACCATCCTCGTTTTCCTaGCTGTGGGTACCTCATGGTGTCTGCACCTCACACTCCTCTGCA +
Preference number: 5 (lower is better)
Translates to: AQLFAGASPRPSSFS*LWVPHGVCTSHSSA
Trigger: TGCAGAGGAGTGTGAGGTGCAGACACCATGAGGTACCCACAGCCAGGAAAACGAGGATGGTCGGGGAGACGCGCCAGCGAAGAGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS CCA 90 bp CTCTCTCCTTGGGCTGTGAGCAGGGCAGGGCCTGACTCTGCTCTGTaGCTCTACATGCCCCAGCTGTCCAAGGCTAGGGACAGAAGGAGC +
Preference number: 5 (lower is better)
Translates to: LSPWAVSRAGPDSAL*LYMPQLSKARDRRS
Trigger: GCTCCTTCTGTCCCTAGCCTTGGACAGCTGGGGCATGTAGAGCCACAGAGCAGAGTCAGGCCCTGCCCTGCTCACAGCCCAAGGAGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574824.5
CDS-3UTR CAA 90 bp ATCTCCGCGAAGGACAAGGGCCCCAGCTTCCGGTACTCCTCCTGCAGCACCTTGCAACCTCTTCCGCTCTaGGTCTTCCTGCTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: ISAKDKGPSFRYSSCSTLQPLPL*VFLLPQ
Trigger: CTGGGGCAGCAGGAAGACCAAGAGCGGAAGAGGTTG...CAAGGTGCTGCAGGAGGAGTACCGGAAGCTGGGGCCCTTGTCCTTCGCGGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR CAA 90 bp GCCATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTTGGGGATGGCAGGGGCCCAGGAGCACCACGTaGGGTCCCGTCCCGGTCAGG +
Preference number: 5 (lower is better)
Translates to: AITAHTWSVILAIWGWQGPRSTT*GPVPVR
Trigger: CCTGACCGGGACGGGACCCAACGTGGTGCTCCTGGG...CCCCTGCCATCCCCAAATAGCTAGGATCACACTCCAAGTATGGGCAGTGATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGCCCAGGAGCACCACGTaGGGTCCCGTCCCGGTCAGG +
Preference number: 5 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVPRSTT*GPVPVR
Trigger: CCTGACCGGGACGGGACCCAACGTGGTGCTCCTGGG...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CAA 90 bp TGTTGGTGTCCTTCATGTACTGGACACACACCTGGAGCGTGGCACGAAGGCCTCCGCAGGGCGATCCTCTaGTGCAGGTTCCAGCGCTCC +
Preference number: 5 (lower is better)
Translates to: CWCPSCTGHTPGAWHEGLRRAIL*CRFQRS
Trigger: GGAGCGCTGGAACCTGCACAAGAGGATCGCCCTGCG...GAGGCCTTCGTGCCACGCTCCAGGTGTGTGTCCAGTACATGAAGGACACCAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575230.1
CDS-3UTR CAA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGCCCAGGAGCACCACGTaGGGTCCCGTCCCGGTCAGG +
Preference number: 5 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRPRSTT*GPVPVR
Trigger: CCTGACCGGGACGGGACCCAACGTGGTGCTCCTGGG...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CAA 90 bp AGCCCACTGTGGCCCCCAGAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTGCCCACGGGCAGGGGTaGTTTGCTGAGAGATCACCA +
Preference number: 5 (lower is better)
Translates to: SPLWPPERHHCPYLECDPAHGQG*FAERSP
Trigger: TGGTGATCTCTCAGCAAACAACCCCTGCCCGTGGGC...AGGATCACACTCCAAGTATGGGCAGTGATGGCGCTCTGGGGGCCACAGTGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp AGGCAGAGCGGGTACAGCAGCCTGCATCCTGATCCCTCGGCTACCTGGCCTCCCACACATACTCGGTCCTaGATGGGGTTTCCTGAGGCT +
Preference number: 5 (lower is better)
Translates to: RQSGYSSLHPDPSATWPPTHTRS*MGFPEA
Trigger: AGCCTCAGGAAACCCCATCAAGGACCGAGTATGTGT...GGGAGGCCAGGTAGCCGAGGGATCAGGATGCAGGCTGCTGTACCCGCTCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp TCCACAGCCACGGCCACGATGAGGCCGCCCAGGAACAGCATGTTGGTGTCCTTCCATCAGGACTGTCCCTaGCCACACACTAGAGCCACC +
Preference number: 5 (lower is better)
Translates to: STATATMRPPRNSMLVSFHQDCP*PHTRAT
Trigger: GGTGGCTCTAGTGTGTGGCAAGGGACAGTCCTGATG...GAAGGACACCAACATGCTGTTCCTGGGCGGCCTCATCGTGGCCGTGGCTGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575230.1
CDS GCA 90 bp GGCACCAAGGGTGCCTCACATACAGGTGACTCCCAGGACAGGCAGTaGCTTGGACAACCGGAGACCATACTCAGAGGAGCAAGGTGGCAG +
Preference number: 5 (lower is better)
Translates to: GTKGASHTGDSQDRQ*LGQPETILRGARWQ
Trigger: CTGCCACCTTGCTCCTCTGAGTATGGTCTCCGGTTGTCCAAGGCACTGCCTGTCCTGGGAGTCACCTGTATGTGAGGCACCCTTGGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574824.5
CDS GCA 90 bp CCTGCTCAAACAACATCCCTCCTCTGGGACCACGCTCTCAGTGTGTaGACCAGGTGGGGCTGGCCTGACCCTTCTCAATCCTTCCCCCTA +
Preference number: 5 (lower is better)
Translates to: PAQTTSLLWDHALSV*TRWGWPDPSQSFPL
Trigger: TAGGGGGAAGGATTGAGAAGGGTCAGGCCAGCCCCACCTGGTGCACACACTGAGAGCGTGGTCCCAGAGGAGGGATGTTGTTTGAGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574824.5
CDS CCA 90 bp ACTCCTCATGGTCCTTCAGAGCCTGCTCAAACAACATCCCTCCTCTaGGACCACGCTCTCAGTGTGTGCACCAGGTGGGGCTGGCCTGAC +
Preference number: 5 (lower is better)
Translates to: TPHGPSEPAQTTSLL*DHALSVCTRWGWPD
Trigger: GTCAGGCCAGCCCCACCTGGTGCACACACTGAGAGCGTGGTCCCAGAGGAGGGATGTTGTTTGAGCAGGCTCTGAAGGACCATGAGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574824.5
CDS-3UTR CAA 90 bp TGTGGCCCCCAGAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTCGCAGGGCGATCCTCTaGTGCAGGTTCCAGCGCTCC +
Preference number: 5 (lower is better)
Translates to: CGPQSAITAHTWSVILAIRRAIL*CRFQRS
Trigger: GGAGCGCTGGAACCTGCACAAGAGGATCGCCCTGCG...AATAGCTAGGATCACACTCCAAGTATGGGCAGTGATGGCGCTCTGGGGGCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGCGCAGGGCGATCCTCTaGTGCAGGTTCCAGCGCTCC +
Preference number: 5 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVRRAIL*CRFQRS
Trigger: GGAGCGCTGGAACCTGCACAAGAGGATCGCCCTGCG...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CAA 90 bp AGGCAGAGCGGGTACAGCAGCCTGCATCCTGATCCCTCGGCTACCTGGCCTCCCGCCTTCAAAAATCACTaGACTCCCTGGCAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: RQSGYSSLHPDPSATWPPAFKNH*TPWQLL
Trigger: AAGGAGCTGCCAGGGAGTCAAGTGATTTTTGAAGGC...GGGAGGCCAGGTAGCCGAGGGATCAGGATGCAGGCTGCTGTACCCGCTCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS GCA 90 bp CGACCCCCAGGACAGTGCGACTTCATGTCCCCCAGGTATCCTCAGTaGTCAAGGCATCCCTGGGAAGTAGGCAGAGTGGATGGGTTCTCT +
Preference number: 5 (lower is better)
Translates to: RPPGQCDFMSPRYPQ*SRHPWEVGRVDGFS
Trigger: AGAGAACCCATCCACTCTGCCTACTTCCCAGGGATGCCTTGAGCACTGAGGATACCTGGGGGACATGAAGTCGCACTGTCCTGGGGGTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS CCA 90 bp GCATGCTGCAGAATGAAACCCACTGGAGTGGCCTCCCACCCAAGCTaGCCACTCAAGGGAGCCAAGCAGAAGAATTCTGAGGGCCCTGAG +
Preference number: 5 (lower is better)
Translates to: ACCRMKPTGVASHPS*PLKGAKQKNSEGPE
Trigger: CTCAGGGCCCTCAGAATTCTTCTGCTTGGCTCCCTTGAGTGGCCAGCTTGGGTGGGAGGCCACTCCAGTGGGTTTCATTCTGCAGCATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574824.5
CDS CCA 90 bp GCTGTGCTGGGTTCAAAGCACCTGTTTCCATGTCTGCTCTCTCCTTaGGCTGTGAGCAGGGCAGGGCCTGACTCTGCTCTGTGGCTCTAC +
Preference number: 5 (lower is better)
Translates to: AVLGSKHLFPCLLSP*AVSRAGPDSALWLY
Trigger: GTAGAGCCACAGAGCAGAGTCAGGCCCTGCCCTGCTCACAGCCCAAGGAGAGAGCAGACATGGAAACAGGTGCTTTGAACCCAGCACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574824.5
CDS-3UTR CAA 90 bp CTGATCCCTCGGCTACCTGGCCTCCCTCACAGAGATAATGGCAAGGCTTGGGAACCATCATGGCCGTGGTaGCCGTGTTACGTGCAGGCT +
Preference number: 5 (lower is better)
Translates to: LIPRLPGLPHRDNGKAWEPSWPW*PCYVQA
Trigger: AGCCTGCACGTAACACGGCAACCACGGCCATGATGG...TTCCCAAGCCTTGCCATTATCTCTGTGAGGGAGGCCAGGTAGCCGAGGGATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293800.10
CDS-3UTR CAA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGCCTCGGTGGCTGCGCTaGTGGCTTCCATCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVPRWLR*WLPSAA
Trigger: TGCAGCAGATGGAAGCCACAAGCGCAGCCACCGAGG...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CAA 90 bp AAGACTCTGAAGTGGCATAGCCAGTGGAAATTAACAGCTGTGTCCACTCTGGGCCCCAGGAGCACCACGTaGGGTCCCGTCCCGGTCAGG +
Preference number: 5 (lower is better)
Translates to: KTLKWHSQWKLTAVSTLGPRSTT*GPVPVR
Trigger: CCTGACCGGGACGGGACCCAACGTGGTGCTCCTGGG...GCCCAGAGTGGACACAGCTGTTAATTTCCACTGGCTATGCCACTTCAGAGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp AGCCCACTGTGGCCCCCAGAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTCAGATTCCTCATCCTTaGGTGGTGGCCACAGGAGGA +
Preference number: 5 (lower is better)
Translates to: SPLWPPERHHCPYLECDPQIPHP*VVATGG
Trigger: TCCTCCTGTGGCCACCACCAAAGGATGAGGAATCTG...AGGATCACACTCCAAGTATGGGCAGTGATGGCGCTCTGGGGGCCACAGTGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp AGTAGATTGGCCCACGGGCAGGGGTTGTTTGCTGAGAGATCACCAAGCGCTGCTGATGAAGGGCGTAGGTaGGCCTGTGGTGCACTGTGG +
Preference number: 5 (lower is better)
Translates to: SRLAHGQGLFAERSPSAADEGRR*ACGALW
Trigger: CCACAGTGCACCACAGGCCAACCTACGCCCTTCATC...AGCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGCCCGTGGGCCAATCTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp GCCCACGGGCAGGGGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAAGCCCACGGGCAGGGGTaGTTTGCTGAGAGATCACCA +
Preference number: 5 (lower is better)
Translates to: AHGQGLFAERSPSAAQSQAHGQG*FAERSP
Trigger: TGGTGATCTCTCAGCAAACAACCCCTGCCCGTGGGC...TTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGCCCGTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS GCA 90 bp CCCCGACCATCCTCGTTTTCCTGGCTGTGGGTACCTCATGGTGTCTaGACCTCACACTCCTCTGCAGCCCAGCTCAATGACCATCACCTT +
Preference number: 5 (lower is better)
Translates to: PRPSSFSWLWVPHGV*TSHSSAAQLNDHHL
Trigger: AAGGTGATGGTCATTGAGCTGGGCTGCAGAGGAGTGTGAGGTGCAGACACCATGAGGTACCCACAGCCAGGAAAACGAGGATGGTCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS GCA 90 bp CCGATTGGTCCCAGGTACATTTCTGGCCTCTTGGGCTCAAACACTTaGCTCTTTCCCAGCCCAGAGCTGCAAAGCTGCCCTTCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: PIGPRYISGLLGSNT*LFPSPELQSCPSPS
Trigger: GCTGGGAGAAGGGCAGCTTTGCAGCTCTGGGCTGGGAAAGAGGCAAGTGTTTGAGCCCAAGAGGCCAGAAATGTACCTGGGACCAATCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS-3UTR CAA 90 bp ACCCAGACAACAGGGGACCAAGGAGTTGAAGGAGGCTCACTGGAGAGGTGGGACGCACACCTGACAAACTaGGCGGGCATCAGAATGACG +
Preference number: 5 (lower is better)
Translates to: TQTTGDQGVEGGSLERWDAHLTN*AGIRMT
Trigger: CGTCATTCTGATGCCCGCCAAGTTTGTCAGGTGTGC...GTCCCACCTCTCCAGTGAGCCTCCTTCAACTCCTTGGTCCCCTGTTGTCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGCAACCTCTTCCGCTCTaGGTCTTCCTGCTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVQPLPL*VFLLPQ
Trigger: CTGGGGCAGCAGGAAGACCAAGAGCGGAAGAGGTTG...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CAA 90 bp TGGACAGTGTGGTCAGGAATCGTCCCACCCAAGGAACCAGACACATACTCGGTCCAACCTCTTCCGCTCTaGGTCTTCCTGCTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: WTVWSGIVPPKEPDTYSVQPLPL*VFLLPQ
Trigger: CTGGGGCAGCAGGAAGACCAAGAGCGGAAGAGGTTG...GACCGAGTATGTGTCTGGTTCCTTGGGTGGGACGATTCCTGACCACACTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp TTGGGAAAGGCAAATGCAAACCAGGAAGCAAAGTTCACGAGGTCCTTGCTGTCACCCAGGAGCACCACGTaGGGTCCCGTCCCGGTCAGG +
Preference number: 5 (lower is better)
Translates to: LGKANANQEAKFTRSLLSPRSTT*GPVPVR
Trigger: CCTGACCGGGACGGGACCCAACGTGGTGCTCCTGGG...TGACAGCAAGGACCTCGTGAACTTTGCTTCCTGGTTTGCATTTGCCTTTCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR CAA 90 bp CGGCCTCGGTGGCTGCGCTTGTGGCTTCCATCTGCTGCAATATGGCCTCCACGAAAGTTCACGAGGTCCTaGCTGTCAGGAAACAACTCG +
Preference number: 5 (lower is better)
Translates to: RPRWLRLWLPSAAIWPPRKFTRS*LSGNNS
Trigger: CGAGTTGTTTCCTGACAGCAAGGACCTCGTGAACTT...TCGTGGAGGCCATATTGCAGCAGATGGAAGCCACAAGCGCAGCCACCGAGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR CAA 90 bp GGTCCTTGCTGTCAGGAAACAACTCGTTCATCTGGCCCAGGAGCACCACGTTGGGCCTTCTCGTTTTTCTaGCTCTCTAGCCCGCAGCCC +
Preference number: 5 (lower is better)
Translates to: GPCCQETTRSSGPGAPRWAFSFF*LSSPQP
Trigger: GGGCTGCGGGCTAGAGAGCAAGAAAAACGAGAAGGC...CCAACGTGGTGCTCCTGGGCCAGATGAACGAGTTGTTTCCTGACAGCAAGGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR CAA 90 bp GCCCACGGGCAGGGGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAATCCTCCTGCAGCACCTaGAGGGCAGCCTTCTCGTTT +
Preference number: 5 (lower is better)
Translates to: AHGQGLFAERSPSAAQSQSSCST*RAAFSF
Trigger: AAACGAGAAGGCTGCCCTCAAGGTGCTGCAGGAGGA...TTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGCCCGTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp AGCCCACTGTGGCCCCCAGAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTAAGCAGATCAGCACGTaGATCTCCGCGAAGGACAAG +
Preference number: 5 (lower is better)
Translates to: SPLWPPERHHCPYLECDPKQIST*ISAKDK
Trigger: CTTGTCCTTCGCGGAGATCAACGTGCTGATCTGCTT...AGGATCACACTCCAAGTATGGGCAGTGATGGCGCTCTGGGGGCCACAGTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp TGCCATCCAGGAGCTCATCTCTTTGCTACTGCCTCTCTTCCAGAGCAGCACAAGCTGTGTGGGGGATGCTaGAGGCAGAGCGGGTACAGC +
Preference number: 5 (lower is better)
Translates to: CHPGAHLFATASLPEQHKLCGGC*RQSGYS
Trigger: GCTGTACCCGCTCTGCCTCAAGCATCCCCCACACAG...CTTGTGCTGCTCTGGAAGAGAGGCAGTAGCAAAGAGATGAGCTCCTGGATGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp GTGGCCCATTGGCTGGGTTTTGGTGGTGTGTGGACATCGTTGGGTCATTTTGGGGATGAAGGGCGTAGGTaGGCCTGTGGTGCACTGTGG +
Preference number: 5 (lower is better)
Translates to: VAHWLGFGGVWTSLGHFGDEGRR*ACGALW
Trigger: CCACAGTGCACCACAGGCCAACCTACGCCCTTCATC...CCCAAAATGACCCAACGATGTCCACACACCACCAAAACCCAGCCAATGGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp GCCAGCCAAGGCGTCTCGGCAAATGTTGACCCAGACAACAGGGGACCAAGGAGTCTCAACGATCCTCTGTaGTCACCAGCCATGGCTGTG +
Preference number: 5 (lower is better)
Translates to: ASQGVSANVDPDNRGPRSLNDPL*SPAMAV
Trigger: CACAGCCATGGCTGGTGACAACAGAGGATCGTTGAG...ACTCCTTGGTCCCCTGTTGTCTGGGTCAACATTTGCCGAGACGCCTTGGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp GAAGGGACATGGGCACTGGTAGGTGGTTGTCTTAGCTCTCAACCAGGGGATCCGACGGGCAGGGGTTGTTaGCTGAGAGATCACCAAGCG +
Preference number: 5 (lower is better)
Translates to: EGTWALVGGCLSSQPGDPTGRGC*LRDHQA
Trigger: CGCTTGGTGATCTCTCAGCAAACAACCCCTGCCCGT...CGGATCCCCTGGTTGAGAGCTAAGACAACCACCTACCAGTGCCCATGTCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS TCA 90 bp TCCCTTTTGCCACGTCTCTGGCAGATAATTCCACCTACGGAACACTaGAGGCTGAGGTCAGAGGCCACCTGCCCTAGAAGGCCTTACCCC +
Preference number: 5 (lower is better)
Translates to: SLLPRLWQIIPPTEH*RLRSEATCPRRPYP
Trigger: GGGGTAAGGCCTTCTAGGGCAGGTGGCCTCTGACCTCAGCCTTCAGTGTTCCGTAGGTGGAATTATCTGCCAGAGACGTGGCAAAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS CCA 90 bp GACGTAGGCACACCTGACAAACTTGGCGGGCATCAGAATGACGAGTaGCAGCAGCAGGAGCGGGGTGACGAACAAGATCACGAAGGACTT +
Preference number: 5 (lower is better)
Translates to: DVGTPDKLGGHQNDE*QQQERGDEQDHEGL
Trigger: AAGTCCTTCGTGATCTTGTTCGTCACCCCGCTCCTGCTGCTGCCACTCGTCATTCTGATGCCCGCCAAGTTTGTCAGGTGTGCCTACGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293800.10
ENST00000433363.7
ENST00000572094.1
ENST00000573648.5
ENST00000575230.1
CDS CCA 90 bp TGCGACTTCATGTCCCCCAGGTATCCTCAGTGCTCAAGGCATCCCTaGGAAGTAGGCAGAGTGGATGGGTTCTCTATGCCCGTGCGCATT +
Preference number: 5 (lower is better)
Translates to: CDFMSPRYPQCSRHP*EVGRVDGFSMPVRI
Trigger: AATGCGCACGGGCATAGAGAACCCATCCACTCTGCCTACTTCCCAGGGATGCCTTGAGCACTGAGGATACCTGGGGGACATGAAGTCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS-3UTR CAA 90 bp GCCCACGGGCAGGGGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAAGCACACCTGACAAACTaGGCGGGCATCAGAATGACG +
Preference number: 5 (lower is better)
Translates to: AHGQGLFAERSPSAAQSQAHLTN*AGIRMT
Trigger: CGTCATTCTGATGCCCGCCAAGTTTGTCAGGTGTGC...TTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGCCCGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp TTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACGATCCTCTGTTGTCACCAGTGTTACGTGCAGGCTaGGCCCCCACCCAGAGGAGC +
Preference number: 5 (lower is better)
Translates to: LLRDHQALLNLNDPLLSPVLRAG*APTQRS
Trigger: GCTCCTCTGGGTGGGGGCCAAGCCTGCACGTAACAC...TGGTGACAACAGAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293800.10
CDS-3UTR CAA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGGCCTTCTCGTTTTTCTaGCTCTCTAGCCCGCAGCCC +
Preference number: 5 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVAFSFF*LSSPQP
Trigger: GGGCTGCGGGCTAGAGAGCAAGAAAAACGAGAAGGC...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CAA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGTCCTCCTGCAGCACCTaGAGGGCAGCCTTCTCGTTT +
Preference number: 5 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVSSCST*RAAFSF
Trigger: AAACGAGAAGGCTGCCCTCAAGGTGCTGCAGGAGGA...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CAA 90 bp GCCACAGCCAGGCGAACAGCAGCATCACCAGCATGTTGGGAAAGGCAAATGCAATCCTCCTGCAGCACCTaGAGGGCAGCCTTCTCGTTT +
Preference number: 5 (lower is better)
Translates to: ATARRTAASPACWERQMQSSCST*RAAFSF
Trigger: AAACGAGAAGGCTGCCCTCAAGGTGCTGCAGGAGGA...TTGCATTTGCCTTTCCCAACATGCTGGTGATGCTGCTGTTCGCCTGGCTGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR CAA 90 bp GAAGGGACATGGGCACTGGTAGGTGGTTGTCTTAGCTCTCAACCAGGGGATCCGATGATGTACAGCGGATaGAGGCCGATGGAGCGAGAC +
Preference number: 5 (lower is better)
Translates to: EGTWALVGGCLSSQPGDPMMYSG*RPMERD
Trigger: GTCTCGCTCCATCGGCCTCAATCCGCTGTACATCAT...CGGATCCCCTGGTTGAGAGCTAAGACAACCACCTACCAGTGCCCATGTCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGGCCCGTCCCCAGGTGTaGACAGCCAAAAACACACAG +
Preference number: 5 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVARPQV*TAKNTQ
Trigger: CTGTGTGTTTTTGGCTGTCAACACCTGGGGACGGGC...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CAA 90 bp GAAGGGACATGGGCACTGGTAGGTGGTTGTCTTAGCTCTCAACCAGGGGATCCGCCCATTGGCTGGGTTTaGGTGGTGTGTGGACATCGT +
Preference number: 5 (lower is better)
Translates to: EGTWALVGGCLSSQPGDPPIGWV*VVCGHR
Trigger: ACGATGTCCACACACCACCAAAACCCAGCCAATGGG...CGGATCCCCTGGTTGAGAGCTAAGACAACCACCTACCAGTGCCCATGTCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS TCA 90 bp TACAAGGACGTGCCAGCTTCCCTGTGGACCTCCTCAGGCTCTTTCTaGTGCCTGCTCTGCAAGCTTCCCTCATGGTCACTAACCATCGCT +
Preference number: 5 (lower is better)
Translates to: YKDVPASLWTSSGSF*CLLCKLPSWSLTIA
Trigger: AGCGATGGTTAGTGACCATGAGGGAAGCTTGCAGAGCAGGCATCAGAAAGAGCCTGAGGAGGTCCACAGGGAAGCTGGCACGTCCTTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS GCA 90 bp CAGGTTCATTGCTCACCCCAGTGCCTTAACTATCCTACAAGGACGTaGCAGCTTCCCTGTGGACCTCCTCAGGCTCTTTCTGATGCCTGC +
Preference number: 5 (lower is better)
Translates to: QVHCSPQCLNYPTRT*QLPCGPPQALSDAC
Trigger: GCAGGCATCAGAAAGAGCCTGAGGAGGTCCACAGGGAAGCTGGCACGTCCTTGTAGGATAGTTAAGGCACTGGGGTGAGCAATGAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS GCA 90 bp AGCATGTGTGAACTTGGGTTTGGAAGTGGAAGCTCTCCAGCATGCTaGAGAATGAAACCCACTGGAGTGGCCTCCCACCCAAGCTGGCCA +
Preference number: 5 (lower is better)
Translates to: SMCELGFGSGSSPAC*RMKPTGVASHPSWP
Trigger: TGGCCAGCTTGGGTGGGAGGCCACTCCAGTGGGTTTCATTCTGCAGCATGCTGGAGAGCTTCCACTTCCAAACCCAAGTTCACACATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574824.5
CDS CCA 90 bp CTTCATGTACTGGACACACACCTTGGCGGGCATCAGAATGACGAGTaGCAGCAGCAGGAGCGGGGTGACGAACAAGATCACGAAGGACTT +
Preference number: 5 (lower is better)
Translates to: LHVLDTHLGGHQNDE*QQQERGDEQDHEGL
Trigger: AAGTCCTTCGTGATCTTGTTCGTCACCCCGCTCCTGCTGCTGCCACTCGTCATTCTGATGCCCGCCAAGGTGTGTGTCCAGTACATGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381074.8
CDS-3UTR CAA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGGCACACCTGACAAACTaGGCGGGCATCAGAATGACG +
Preference number: 5 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVAHLTN*AGIRMT
Trigger: CGTCATTCTGATGCCCGCCAAGTTTGTCAGGTGTGC...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293800.10
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CAA 90 bp CACGATGAGGCCGCCCAGGAACAGCATGTTGGTGTCCTTCATGTACTGGACACAGCACACCTGACAAACTaGGCGGGCATCAGAATGACG +
Preference number: 5 (lower is better)
Translates to: HDEAAQEQHVGVLHVLDTAHLTN*AGIRMT
Trigger: CGTCATTCTGATGCCCGCCAAGTTTGTCAGGTGTGC...TGTGTCCAGTACATGAAGGACACCAACATGCTGTTCCTGGGCGGCCTCATCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575230.1
CDS-3UTR CAA 90 bp CAACGATCCTCTGTTGTCACCAGCCATGGCTGTGAAGGCCAGTCAACAAAGGGAGCCTTCTCGTTTTTCTaGCTCTCTAGCCCGCAGCCC +
Preference number: 5 (lower is better)
Translates to: QRSSVVTSHGCEGQSTKGAFSFF*LSSPQP
Trigger: GGGCTGCGGGCTAGAGAGCAAGAAAAACGAGAAGGC...TCCCTTTGTTGACTGGCCTTCACAGCCATGGCTGGTGACAACAGAGGATCGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp TGGGGTTTCCTGAGGCTCTCATACTTTCTCCTGCCCTGGAAAATGCCATCCAGGGCCTTCTCGTTTTTCTaGCTCTCTAGCCCGCAGCCC +
Preference number: 5 (lower is better)
Translates to: WGFLRLSYFLLPWKMPSRAFSFF*LSSPQP
Trigger: GGGCTGCGGGCTAGAGAGCAAGAAAAACGAGAAGGC...CCTGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAACCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGCCTTCTCGTTTTTCTaGCTCTCTAGCCCGCAGCCC +
Preference number: 5 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRAFSFF*LSSPQP
Trigger: GGGCTGCGGGCTAGAGAGCAAGAAAAACGAGAAGGC...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CAA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGTCCTCCTGCAGCACCTaGAGGGCAGCCTTCTCGTTT +
Preference number: 5 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRSSCST*RAAFSF
Trigger: AAACGAGAAGGCTGCCCTCAAGGTGCTGCAGGAGGA...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CAA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGCATCGGAGACATACTTaGTCTCACCCTCCACCCAGG +
Preference number: 5 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVHRRHT*SHPPPR
Trigger: CCTGGGTGGAGGGTGAGACAAAGTATGTCTCCGATG...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CAA 90 bp CAACGATCCTCTGTTGTCACCAGCCATGGCTGTGAAGGCCAGTCAACAAAGGGAGCCCGTCCCCAGGTGTaGACAGCCAAAAACACACAG +
Preference number: 5 (lower is better)
Translates to: QRSSVVTSHGCEGQSTKGARPQV*TAKNTQ
Trigger: CTGTGTGTTTTTGGCTGTCAACACCTGGGGACGGGC...TCCCTTTGTTGACTGGCCTTCACAGCCATGGCTGGTGACAACAGAGGATCGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp TGCCATCCAGGAGCTCATCTCTTTGCTACTGCCTCTCTTCCAGAGCAGCACAAGGCCCGTCCCCAGGTGTaGACAGCCAAAAACACACAG +
Preference number: 5 (lower is better)
Translates to: CHPGAHLFATASLPEQHKARPQV*TAKNTQ
Trigger: CTGTGTGTTTTTGGCTGTCAACACCTGGGGACGGGC...CTTGTGCTGCTCTGGAAGAGAGGCAGTAGCAAAGAGATGAGCTCCTGGATGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp TGGGGTTTCCTGAGGCTCTCATACTTTCTCCTGCCCTGGAAAATGCCATCCAGGTCTCTGCATCTGGGCTaGGAGGAAGAGGTGGCCCAT +
Preference number: 5 (lower is better)
Translates to: WGFLRLSYFLLPWKMPSRSLHLG*EEEVAH
Trigger: ATGGGCCACCTCTTCCTCCAAGCCCAGATGCAGAGA...CCTGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp CCAGCCATGGCTGTGAAGGCCAGTCAACAAAGGGAAGATTTTACCCAGAGGAGCCAGGGGACCAAGGAGTaGAAGGAGGCTCACTGGAGA +
Preference number: 5 (lower is better)
Translates to: PAMAVKASQQREDFTQRSQGTKE*KEAHWR
Trigger: TCTCCAGTGAGCCTCCTTCAACTCCTTGGTCCCCTG...GCTCCTCTGGGTAAAATCTTCCCTTTGTTGACTGGCCTTCACAGCCATGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp GTGTGGTCAGGAATCGTCCCACCCAAGGAACCAGACACATACTCGGTCCTTGATGCGTCTCGGCAAATGTaGACCCAGACAACAGGGGAC +
Preference number: 5 (lower is better)
Translates to: VWSGIVPPKEPDTYSVLDASRQM*TQTTGD
Trigger: GTCCCCTGTTGTCTGGGTCAACATTTGCCGAGACGC...ATCAAGGACCGAGTATGTGTCTGGTTCCTTGGGTGGGACGATTCCTGACCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGCGTCTCGGCAAATGTaGACCCAGACAACAGGGGAC +
Preference number: 5 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRASRQM*TQTTGD
Trigger: GTCCCCTGTTGTCTGGGTCAACATTTGCCGAGACGC...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp TGGACAGTGTGGTCAGGAATCGTCCCACCCAAGGAACCAGACACATACTCGGTCGTAACTTCAAGTAGATaGGCCCACGGGCAGGGGTTG +
Preference number: 5 (lower is better)
Translates to: WTVWSGIVPPKEPDTYSVVTSSR*AHGQGL
Trigger: CAACCCCTGCCCGTGGGCCAATCTACTTGAAGTTAC...GACCGAGTATGTGTCTGGTTCCTTGGGTGGGACGATTCCTGACCACACTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGTACTGGACACACACCTaGGCGGGCATCAGAATGACG +
Preference number: 5 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVYWTHT*AGIRMT
Trigger: CGTCATTCTGATGCCCGCCAAGGTGTGTGTCCAGTA...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381074.8
CDS TCA 90 bp CTCGGGTCTTCTGACTGCGAGACCAGGGATCTTTCCATACTACCCTaGAGCTGGTACGTCATGGAGGCAAAGATGGGCAGGAACAAGGTG +
Preference number: 5 (lower is better)
Translates to: LGSSDCETRDLSILP*SWYVMEAKMGRNKV
Trigger: CACCTTGTTCCTGCCCATCTTTGCCTCCATGACGTACCAGCTTCAGGGTAGTATGGAAAGATCCCTGGTCTCGCAGTCAGAAGACCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572727.1
CDS GCA 90 bp CAGGGCAGCATGATGTACAGCGGATTGAGGCCGATGGAGCGAGACTaGGGAAAAACAGCACTGCAACATCACCGTACAGAACACAGAAGC +
Preference number: 5 (lower is better)
Translates to: QGSMMYSGLRPMERD*GKTALQHHRTEHRS
Trigger: GCTTCTGTGTTCTGTACGGTGATGTTGCAGTGCTGTTTTTCCGCAGTCTCGCTCCATCGGCCTCAATCCGCTGTACATCATGCTGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS GCA 90 bp AGAAGCATGTGTGAACTTGGGTTTGGAAGTGGAAGCTCTCCAGCATaGTGCAGAATGAAACCCACTGGAGTGGCCTCCCACCCAAGCTGG +
Preference number: 5 (lower is better)
Translates to: RSMCELGFGSGSSPA*CRMKPTGVASHPSW
Trigger: CCAGCTTGGGTGGGAGGCCACTCCAGTGGGTTTCATTCTGCAGCATGCTGGAGAGCTTCCACTTCCAAACCCAAGTTCACACATGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574824.5
CDS GCA 90 bp TACTCCCTGGGAAGCAACTGGGGACTGGGTCCACCCCTGCAGGGATaGACAGGTGTTGAGGCCAATTCAAGATCAGATATTGGAATAGGG +
Preference number: 5 (lower is better)
Translates to: YSLGSNWGLGPPLQG*TGVEANSRSDIGIG
Trigger: CCCTATTCCAATATCTGATCTTGAATTGGCCTCAACACCTGTGCATCCCTGCAGGGGTGGACCCAGTCCCCAGTTGCTTCCCAGGGAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574824.5
CDS CCA 90 bp AGGCATCACCACCACGTGCCCAGTATCAAAAGGTGCTCCTTCTACTaGGCGTCTGTTTGGACAGTCTGCTTAGGAGAAGAGGAGACAGGC +
Preference number: 5 (lower is better)
Translates to: RHHHHVPSIKRCSFY*ASVWTVCLGEEETG
Trigger: GCCTGTCTCCTCTTCTCCTAAGCAGACTGTCCAAACAGACGCCCAGTAGAAGGAGCACCTTTTGATACTGGGCACGTGGTGGTGATGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS CCA 90 bp GTAACCCCTGCTCCCTTCTCTGCTGTCTATCAGGAAGACTCCTCATaGTCCTTCAGAGCCTGCTCAAACAACATCCCTCCTCTGGGACCA +
Preference number: 5 (lower is better)
Translates to: VTPAPFSAVYQEDSS*SFRACSNNIPPLGP
Trigger: TGGTCCCAGAGGAGGGATGTTGTTTGAGCAGGCTCTGAAGGACCATGAGGAGTCTTCCTGATAGACAGCAGAGAAGGGAGCAGGGGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574824.5
CDS-3UTR CAA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGCCCAGGAACAGCATGTaGGTGTCCTTCATGTACTGG +
Preference number: 5 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVPRNSM*VSFMYW
Trigger: CCAGTACATGAAGGACACCAACATGCTGTTCCTGGG...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CAA 90 bp AGGGAAGATTTTACCCAGAGGAGCTCAAACGCTGGCATGAAAGACTCTGAAGTGCCTCGGTGGCTGCGCTaGTGGCTTCCATCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: REDFTQRSSNAGMKDSEVPRWLR*WLPSAA
Trigger: TGCAGCAGATGGAAGCCACAAGCGCAGCCACCGAGG...CACTTCAGAGTCTTTCATGCCAGCGTTTGAGCTCCTCTGGGTAAAATCTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp CAAACCAGGAAGCAAAGTTCACGAGGTCCTTGCTGTCAGGAAACAACTCGTTCACCTCGGTGGCTGCGCTaGTGGCTTCCATCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: QTRKQSSRGPCCQETTRSPRWLR*WLPSAA
Trigger: TGCAGCAGATGGAAGCCACAAGCGCAGCCACCGAGG...TGAACGAGTTGTTTCCTGACAGCAAGGACCTCGTGAACTTTGCTTCCTGGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR CAA 90 bp GAAGGGACATGGGCACTGGTAGGTGGTTGTCTTAGCTCTCAACCAGGGGATCCGGCCTTCAAAAATCACTaGACTCCCTGGCAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: EGTWALVGGCLSSQPGDPAFKNH*TPWQLL
Trigger: AAGGAGCTGCCAGGGAGTCAAGTGATTTTTGAAGGC...CGGATCCCCTGGTTGAGAGCTAAGACAACCACCTACCAGTGCCCATGTCCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp CCAGAGTGGGGCCTTCAAAAATCACTTGACTCCCTGGCAGCTCCTTGGCCTTGCGCCTTCAAAAATCACTaGACTCCCTGGCAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: PEWGLQKSLDSLAAPWPCAFKNH*TPWQLL
Trigger: AAGGAGCTGCCAGGGAGTCAAGTGATTTTTGAAGGC...GCAAGGCCAAGGAGCTGCCAGGGAGTCAAGTGATTTTTGAAGGCCCCACTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR CAA 90 bp TTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACGATCCTCTGTTGTCACCACAACCTCTTCCGCTCTaGGTCTTCCTGCTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: LLRDHQALLNLNDPLLSPQPLPL*VFLLPQ
Trigger: CTGGGGCAGCAGGAAGACCAAGAGCGGAAGAGGTTG...TGGTGACAACAGAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGAAGCAGATCAGCACGTaGATCTCCGCGAAGGACAAG +
Preference number: 5 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVKQIST*ISAKDK
Trigger: CTTGTCCTTCGCGGAGATCAACGTGCTGATCTGCTT...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CAA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGCATCGGAGACATACTTaGTCTCACCCTCCACCCAGG +
Preference number: 5 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRHRRHT*SHPPPR
Trigger: CCTGGGTGGAGGGTGAGACAAAGTATGTCTCCGATG...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CAA 90 bp GTGTGGTCAGGAATCGTCCCACCCAAGGAACCAGACACATACTCGGTCCTTGATCATCGGAGACATACTTaGTCTCACCCTCCACCCAGG +
Preference number: 5 (lower is better)
Translates to: VWSGIVPPKEPDTYSVLDHRRHT*SHPPPR
Trigger: CCTGGGTGGAGGGTGAGACAAAGTATGTCTCCGATG...ATCAAGGACCGAGTATGTGTCTGGTTCCTTGGGTGGGACGATTCCTGACCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGATGATGTACAGCGGATaGAGGCCGATGGAGCGAGAC +
Preference number: 5 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRMMYSG*RPMERD
Trigger: GTCTCGCTCCATCGGCCTCAATCCGCTGTACATCAT...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
CDS-3UTR CAA 90 bp TGCCATCCAGGAGCTCATCTCTTTGCTACTGCCTCTCTTCCAGAGCAGCACAAGATGATGTACAGCGGATaGAGGCCGATGGAGCGAGAC +
Preference number: 5 (lower is better)
Translates to: CHPGAHLFATASLPEQHKMMYSG*RPMERD
Trigger: GTCTCGCTCCATCGGCCTCAATCCGCTGTACATCAT...CTTGTGCTGCTCTGGAAGAGAGGCAGTAGCAAAGAGATGAGCTCCTGGATGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp GTGGCCCATTGGCTGGGTTTTGGTGGTGTGTGGACATCGTTGGGTCATTTTGGGGCTGTGTGTGTGGTCTaGTGGCTCTTCCTAAGTCTC +
Preference number: 5 (lower is better)
Translates to: VAHWLGFGGVWTSLGHFGAVCVV*WLFLSL
Trigger: GAGACTTAGGAAGAGCCACAAGACCACACACACAGC...CCCAAAATGACCCAACGATGTCCACACACCACCAAAACCCAGCCAATGGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGGCTGTGTGTGTGGTCTaGTGGCTCTTCCTAAGTCTC +
Preference number: 5 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVAVCVV*WLFLSL
Trigger: GAGACTTAGGAAGAGCCACAAGACCACACACACAGC...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CAA 90 bp GCCATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTTGGGGATGGCAGGGGGCTGTGTGTGTGGTCTaGTGGCTCTTCCTAAGTCTC +
Preference number: 5 (lower is better)
Translates to: AITAHTWSVILAIWGWQGAVCVV*WLFLSL
Trigger: GAGACTTAGGAAGAGCCACAAGACCACACACACAGC...CCCCTGCCATCCCCAAATAGCTAGGATCACACTCCAAGTATGGGCAGTGATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp TTTCCTGAGGCTCTCATACTTTCTCCTGCCCTGGAAAATGCCATCCAGGAGCTCTCTCTGCATCTGGGCTaGGAGGAAGAGGTGGCCCAT +
Preference number: 5 (lower is better)
Translates to: FPEALILSPALENAIQELSLHLG*EEEVAH
Trigger: ATGGGCCACCTCTTCCTCCAAGCCCAGATGCAGAGA...GAGCTCCTGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp TTTCCTGAGGCTCTCATACTTTCTCCTGCCCTGGAAAATGCCATCCAGGAGCTCCAGGGGACCAAGGAGTaGAAGGAGGCTCACTGGAGA +
Preference number: 5 (lower is better)
Translates to: FPEALILSPALENAIQELQGTKE*KEAHWR
Trigger: TCTCCAGTGAGCCTCCTTCAACTCCTTGGTCCCCTG...GAGCTCCTGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp GTGGCCCATTGGCTGGGTTTTGGTGGTGTGTGGACATCGTTGGGTCATTTTGGGTGTGATCCTAGCTATTaGGGGATGGCAGGGGAAGCA +
Preference number: 5 (lower is better)
Translates to: VAHWLGFGGVWTSLGHFGCDPSY*GMAGEA
Trigger: TGCTTCCCCTGCCATCCCCAAATAGCTAGGATCACA...CCCAAAATGACCCAACGATGTCCACACACCACCAAAACCCAGCCAATGGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGTGTGATCCTAGCTATTaGGGGATGGCAGGGGAAGCA +
Preference number: 5 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVCDPSY*GMAGEA
Trigger: TGCTTCCCCTGCCATCCCCAAATAGCTAGGATCACA...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp AAGACCAGGCATTCCGTCCCTGGCTGGGGTGTCCCTTCCAGAGTGACAGAGATGCATCACTGCCCATACTaGGAGTGTGATCCTAGCTAT +
Preference number: 5 (lower is better)
Translates to: KTRHSVPGWGVPSRVTEMHHCPY*ECDPSY
Trigger: ATAGCTAGGATCACACTCCAAGTATGGGCAGTGATG...CATCTCTGTCACTCTGGAAGGGACACCCCAGCCAGGGACGGAATGCCTGGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp TTTCCTGAGGCTCTCATACTTTCTCCTGCCCTGGAAAATGCCATCCAGGAGCTCACGGGCAGGGGTTGTTaGCTGAGAGATCACCAAGCG +
Preference number: 5 (lower is better)
Translates to: FPEALILSPALENAIQELTGRGC*LRDHQA
Trigger: CGCTTGGTGATCTCTCAGCAAACAACCCCTGCCCGT...GAGCTCCTGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp AAGACCAGGCATTCCGTCCCTGGCTGGGGTGTCCCTTCCAGAGTGACAGAGATGGGGGAAAGAAGATGCTaGTCTCTCATGTCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: KTRHSVPGWGVPSRVTEMGERRC*SLMSVS
Trigger: AGAGACAGACATGAGAGACAAGCATCTTCTTTCCCC...CATCTCTGTCACTCTGGAAGGGACACCCCAGCCAGGGACGGAATGCCTGGTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS GCA 90 bp CTAGGAGAGAGGAGGCATCACCACCACGTGCCCAGTATCAAAAGGTaGTCCTTCTACTGGGCGTCTGTTTGGACAGTCTGCTTAGGAGAA +
Preference number: 5 (lower is better)
Translates to: LGERRHHHHVPSIKR*SFYWASVWTVCLGE
Trigger: TTCTCCTAAGCAGACTGTCCAAACAGACGCCCAGTAGAAGGAGCACCTTTTGATACTGGGCACGTGGTGGTGATGCCTCCTCTCTCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS GCA 90 bp TTCTCTGCTGTCTATCAGGAAGACTCCTCATGGTCCTTCAGAGCCTaGTCAAACAACATCCCTCCTCTGGGACCACGCTCTCAGTGTGTG +
Preference number: 5 (lower is better)
Translates to: FSAVYQEDSSWSFRA*SNNIPPLGPRSQCV
Trigger: CACACACTGAGAGCGTGGTCCCAGAGGAGGGATGTTGTTTGAGCAGGCTCTGAAGGACCATGAGGAGTCTTCCTGATAGACAGCAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574824.5
CDS CCA 90 bp GAGATAACGAACACCCGATTGGTCCCAGGTACATTTCTGGCCTCTTaGGCTCAAACACTTGCCTCTTTCCCAGCCCAGAGCTGCAAAGCT +
Preference number: 5 (lower is better)
Translates to: EITNTRLVPGTFLAS*AQTLASFPAQSCKA
Trigger: AGCTTTGCAGCTCTGGGCTGGGAAAGAGGCAAGTGTTTGAGCCCAAGAGGCCAGAAATGTACCTGGGACCAATCGGGTGTTCGTTATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS-3UTR CAA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGAAGTTCACGAGGTCCTaGCTGTCAGGAAACAACTCG +
Preference number: 5 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVKFTRS*LSGNNS
Trigger: CGAGTTGTTTCCTGACAGCAAGGACCTCGTGAACTT...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CAA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGAAGCAGATCAGCACGTaGATCTCCGCGAAGGACAAG +
Preference number: 5 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRKQIST*ISAKDK
Trigger: CTTGTCCTTCGCGGAGATCAACGTGCTGATCTGCTT...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CAA 90 bp TCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGTAAGGGCTGTGCTGCGGAAGTTAAACTaGGGCTTCTGTGAAGGCACA +
Preference number: 5 (lower is better)
Translates to: SVQGVPEGSVVLRRVRAVLRKLN*GFCEGT
Trigger: TGTGCCTTCACAGAAGCCCAAGTTTAACTTCCGCAG...CACAGCCCTTACCCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CAA 90 bp AAATGCCATCCAGGAGCTCATCTCTTTGCTACTGCCTCTCTTCCAGAGCAGCACCTCAACGATCCTCTGTaGTCACCAGCCATGGCTGTG +
Preference number: 5 (lower is better)
Translates to: KCHPGAHLFATASLPEQHLNDPL*SPAMAV
Trigger: CACAGCCATGGCTGGTGACAACAGAGGATCGTTGAG...GTGCTGCTCTGGAAGAGAGGCAGTAGCAAAGAGATGAGCTCCTGGATGGCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp TTTCCTGAGGCTCTCATACTTTCTCCTGCCCTGGAAAATGCCATCCAGGAGCTCGTAACTTCAAGTAGATaGGCCCACGGGCAGGGGTTG +
Preference number: 5 (lower is better)
Translates to: FPEALILSPALENAIQELVTSSR*AHGQGL
Trigger: CAACCCCTGCCCGTGGGCCAATCTACTTGAAGTTAC...GAGCTCCTGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp GCCCACGGGCAGGGGTTGTTTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAAGGGGAAAGAAGATGCTaGTCTCTCATGTCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: AHGQGLFAERSPSAAQSQGERRC*SLMSVS
Trigger: AGAGACAGACATGAGAGACAAGCATCTTCTTTCCCC...TTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAAACAACCCCTGCCCGTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp CCAGCCATGGCTGTGAAGGCCAGTCAACAAAGGGAAGATTTTACCCAGAGGAGCACACATACTCGGTCCTaGATGGGGTTTCCTGAGGCT +
Preference number: 5 (lower is better)
Translates to: PAMAVKASQQREDFTQRSTHTRS*MGFPEA
Trigger: AGCCTCAGGAAACCCCATCAAGGACCGAGTATGTGT...GCTCCTCTGGGTAAAATCTTCCCTTTGTTGACTGGCCTTCACAGCCATGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS GCA 90 bp TTGGGCTCAAACACTTGCCTCTTTCCCAGCCCAGAGCTGCAAAGCTaGCCTTCTCCCAGCAAAGGTGACAGAGCTAATGAAGAGTTCTTC +
Preference number: 5 (lower is better)
Translates to: LGSNTCLFPSPELQS*PSPSKGDRANEEFF
Trigger: GAAGAACTCTTCATTAGCTCTGTCACCTTTGCTGGGAGAAGGGCAGCTTTGCAGCTCTGGGCTGGGAAAGAGGCAAGTGTTTGAGCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS-3UTR CAA 90 bp CAGGAAGCAAAGTTCACGAGGTCCTTGCTGTCAGGAAACAACTCGTTCATCTGGGCACACCTGACAAACTaGGCGGGCATCAGAATGACG +
Preference number: 5 (lower is better)
Translates to: QEAKFTRSLLSGNNSFIWAHLTN*AGIRMT
Trigger: CGTCATTCTGATGCCCGCCAAGTTTGTCAGGTGTGC...CCAGATGAACGAGTTGTTTCCTGACAGCAAGGACCTCGTGAACTTTGCTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572094.1
CDS-3UTR CAA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGGCCTTCAAAAATCACTaGACTCCCTGGCAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRAFKNH*TPWQLL
Trigger: AAGGAGCTGCCAGGGAGTCAAGTGATTTTTGAAGGC...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CAA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGAAGTTCACGAGGTCCTaGCTGTCAGGAAACAACTCG +
Preference number: 5 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRKFTRS*LSGNNS
Trigger: CGAGTTGTTTCCTGACAGCAAGGACCTCGTGAACTT...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CAA 90 bp GAGCGCCATCACTGCCCATACTTGGAGTGTGATCCTAGCTATTTGGGGATGGCAAAGTTCACGAGGTCCTaGCTGTCAGGAAACAACTCG +
Preference number: 5 (lower is better)
Translates to: ERHHCPYLECDPSYLGMAKFTRS*LSGNNS
Trigger: CGAGTTGTTTCCTGACAGCAAGGACCTCGTGAACTT...TGCCATCCCCAAATAGCTAGGATCACACTCCAAGTATGGGCAGTGATGGCGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp AAATGCCATCCAGGAGCTCATCTCTTTGCTACTGCCTCTCTTCCAGAGCAGCACAAGCAGATCAGCACGTaGATCTCCGCGAAGGACAAG +
Preference number: 5 (lower is better)
Translates to: KCHPGAHLFATASLPEQHKQIST*ISAKDK
Trigger: CTTGTCCTTCGCGGAGATCAACGTGCTGATCTGCTT...GTGCTGCTCTGGAAGAGAGGCAGTAGCAAAGAGATGAGCTCCTGGATGGCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp TGGGGTTTCCTGAGGCTCTCATACTTTCTCCTGCCCTGGAAAATGCCATCCAGGCTGCGGAAGTTAAACTaGGGCTTCTGTGAAGGCACA +
Preference number: 5 (lower is better)
Translates to: WGFLRLSYFLLPWKMPSRLRKLN*GFCEGT
Trigger: TGTGCCTTCACAGAAGCCCAAGTTTAACTTCCGCAG...CCTGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp GAACCCCAAAACTCTGTACAAGGTGTGCCAGAAGGTTCGGTAGTCCTGAGGAGGCTGCGGAAGTTAAACTaGGGCTTCTGTGAAGGCACA +
Preference number: 5 (lower is better)
Translates to: EPQNSVQGVPEGSVVLRRLRKLN*GFCEGT
Trigger: TGTGCCTTCACAGAAGCCCAAGTTTAACTTCCGCAG...CCTCCTCAGGACTACCGAACCTTCTGGCACACCTTGTACAGAGTTTTGGGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
CDS-3UTR CAA 90 bp CCAGCCATGGCTGTGAAGGCCAGTCAACAAAGGGAAGATTTTACCCAGAGGAGCCTGCGGAAGTTAAACTaGGGCTTCTGTGAAGGCACA +
Preference number: 5 (lower is better)
Translates to: PAMAVKASQQREDFTQRSLRKLN*GFCEGT
Trigger: TGTGCCTTCACAGAAGCCCAAGTTTAACTTCCGCAG...GCTCCTCTGGGTAAAATCTTCCCTTTGTTGACTGGCCTTCACAGCCATGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp TGTCAACAATGGCTACAGGTCTGGATGTTCCGTGGCATTCCCAAGTCACATGACATGATGTACAGCGGATaGAGGCCGATGGAGCGAGAC +
Preference number: 5 (lower is better)
Translates to: CQQWLQVWMFRGIPKSHDMMYSG*RPMERD
Trigger: GTCTCGCTCCATCGGCCTCAATCCGCTGTACATCAT...GTCATGTGACTTGGGAATGCCACGGAACATCCAGACCTGTAGCCATTGTTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570687.1
CDS-3UTR CAA 90 bp TTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACGATCCTCTGTTGTCACCACCCATTGGCTGGGTTTaGGTGGTGTGTGGACATCGT +
Preference number: 5 (lower is better)
Translates to: LLRDHQALLNLNDPLLSPPIGWV*VVCGHR
Trigger: ACGATGTCCACACACCACCAAAACCCAGCCAATGGG...TGGTGACAACAGAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp TTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACGATCCTCTGTTGTCACCACAGATTCCTCATCCTTaGGTGGTGGCCACAGGAGGA +
Preference number: 5 (lower is better)
Translates to: LLRDHQALLNLNDPLLSPQIPHP*VVATGG
Trigger: TCCTCCTGTGGCCACCACCAAAGGATGAGGAATCTG...TGGTGACAACAGAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS TCA 90 bp ACCCAGGCTAGGAGGAGGGGGAGAGTTTGCATGAATGGAGTTGTCTaGGAAGAACCAAGGCTTCTACATGATATCTCAAGGCACCAAGGG +
Preference number: 5 (lower is better)
Translates to: TQARRRGRVCMNGVV*EEPRLLHDISRHQG
Trigger: CCCTTGGTGCCTTGAGATATCATGTAGAAGCCTTGGTTCTTCTCAGACAACTCCATTCATGCAAACTCTCCCCCTCCTCCTAGCCTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574824.5
CDS TCA 90 bp AAGCAACTGGGGACTGGGTCCACCCCTGCAGGGATGCACAGGTGTTaGGGCCAATTCAAGATCAGATATTGGAATAGGGATGACGGTTTT +
Preference number: 5 (lower is better)
Translates to: KQLGTGSTPAGMHRC*GQFKIRYWNRDDGF
Trigger: AAAACCGTCATCCCTATTCCAATATCTGATCTTGAATTGGCCTCAACACCTGTGCATCCCTGCAGGGGTGGACCCAGTCCCCAGTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574824.5
CDS GCA 90 bp TCTGAAAAGGATTCTCTGAATGTGCCGGGTACGTTTGAACCTCTGTaGCTCAGTCTTGGTTCCTCTCCCTTTTGCCACGTCTCTGGCAGA +
Preference number: 5 (lower is better)
Translates to: SEKDSLNVPGTFEPL*LSLGSSPFCHVSGR
Trigger: TCTGCCAGAGACGTGGCAAAAGGGAGAGGAACCAAGACTGAGGCACAGAGGTTCAAACGTACCCGGCACATTCAGAGAATCCTTTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS GCA 90 bp TTCAGAAGAAACACTCCCTTTGCTTGTAACCCCTGCTCCCTTCTCTaGTGTCTATCAGGAAGACTCCTCATGGTCCTTCAGAGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: FRRNTPFACNPCSLL*CLSGRLLMVLQSLL
Trigger: GAGCAGGCTCTGAAGGACCATGAGGAGTCTTCCTGATAGACAGCAGAGAAGGGAGCAGGGGTTACAAGCAAAGGGAGTGTTTCTTCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574824.5
CDS CCA 90 bp CACGTGCCCAGTATCAAAAGGTGCTCCTTCTACTGGGCGTCTGTTTaGACAGTCTGCTTAGGAGAAGAGGAGACAGGCCACTTTGCTATT +
Preference number: 5 (lower is better)
Translates to: HVPSIKRCSFYWASV*TVCLGEEETGHFAI
Trigger: AATAGCAAAGTGGCCTGTCTCCTCTTCTCCTAAGCAGACTGTCCAAACAGACGCCCAGTAGAAGGAGCACCTTTTGATACTGGGCACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS-3UTR CAA 90 bp TTGCTGAGAGATCACCAAGCGCTGCTCAATCTCAACGATCCTCTGTTGTCACCACCCAGGAACAGCATGTaGGTGTCCTTCATGTACTGG +
Preference number: 5 (lower is better)
Translates to: LLRDHQALLNLNDPLLSPPRNSM*VSFMYW
Trigger: CCAGTACATGAAGGACACCAACATGCTGTTCCTGGG...TGGTGACAACAGAGGATCGTTGAGATTGAGCAGCGCTTGGTGATCTCTCAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS-3UTR CAA 90 bp TGGGGTTTCCTGAGGCTCTCATACTTTCTCCTGCCCTGGAAAATGCCATCCAGGCATCACTGCCCATACTaGGAGTGTGATCCTAGCTAT +
Preference number: 5 (lower is better)
Translates to: WGFLRLSYFLLPWKMPSRHHCPY*ECDPSY
Trigger: ATAGCTAGGATCACACTCCAAGTATGGGCAGTGATG...CCTGGATGGCATTTTCCAGGGCAGGAGAAAGTATGAGAGCCTCAGGAAACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS TCA 90 bp CTCGGGTCTTCTGACTGCGAGACCAGGGATCTTTCCATACTACCCTaGAGCTGGTACGTCTTTGCAATGGATGACAGAAGGAAATGCAAA +
Preference number: 5 (lower is better)
Translates to: LGSSDCETRDLSILP*SWYVFAMDDRRKCK
Trigger: TTTGCATTTCCTTCTGTCATCCATTGCAAAGACGTACCAGCTTCAGGGTAGTATGGAAAGATCCCTGGTCTCGCAGTCAGAAGACCCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS CCA 90 bp GGAAAAACAGCACTGCAACATCACCGTACAGAACACAGAAGCTCTTaGGGACGTGATTCTGAAAAGGATTCTCTGAATGTGCCGGGTACG +
Preference number: 5 (lower is better)
Translates to: GKTALQHHRTEHRSS*GRDSEKDSLNVPGT
Trigger: CGTACCCGGCACATTCAGAGAATCCTTTTCAGAATCACGTCCCCAAGAGCTTCTGTGTTCTGTACGGTGATGTTGCAGTGCTGTTTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS CCA 90 bp TCATTAGCATCCCCCTGCTGCCTAAGCCTGCCCTGCCTATCTTCATaGTTCTTGCTAATTTGTCAAGTTCATCCTTGGCCATATGAGTCC +
Preference number: 5 (lower is better)
Translates to: SLASPCCLSLPCLSS*FLLICQVHPWPYES
Trigger: GGACTCATATGGCCAAGGATGAACTTGACAAATTAGCAAGAACCATGAAGATAGGCAGGGCAGGCTTAGGCAGCAGGGGGATGCTAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS TCA 90 bp CCTTCTCCCAGCAAAGGTGACAGAGCTAATGAAGAGTTCTTCCTCTaGCTACATTTGTTTCCAAGGCATCATCTACTCCCAGGCAGTGCT +
Preference number: 5 (lower is better)
Translates to: PSPSKGDRANEEFFL*LHLFPRHHLLPGSA
Trigger: AGCACTGCCTGGGAGTAGATGATGCCTTGGAAACAAATGTAGTCAGAGGAAGAACTCTTCATTAGCTCTGTCACCTTTGCTGGGAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS TCA 90 bp AGTTTGCATGAATGGAGTTGTCTGAGAAGAACCAAGGCTTCTACATaGTATCTCAAGGCACCAAGGGTGCCTCACATACAGGTGACTCCC +
Preference number: 5 (lower is better)
Translates to: SLHEWSCLRRTKAST*YLKAPRVPHIQVTP
Trigger: GGGAGTCACCTGTATGTGAGGCACCCTTGGTGCCTTGAGATATCATGTAGAAGCCTTGGTTCTTCTCAGACAACTCCATTCATGCAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574824.5
CDS CCA 90 bp CTCATTTTGCAGTCTACAGAGGCTTTTCATAGCCCTCATCTTACTTaGCCATCAGCACAGCTCTCGGAAGAAAGAACTGAAGGGCCATGT +
Preference number: 5 (lower is better)
Translates to: LILQSTEAFHSPHLT*PSAQLSEERTEGPC
Trigger: ACATGGCCCTTCAGTTCTTTCTTCCGAGAGCTGTGCTGATGGCCAAGTAAGATGAGGGCTATGAAAAGCCTCTGTAGACTGCAAAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS-3UTR CAA 90 bp GGAAATAAAATGGACTTGCGGGGGAAAGAAGATGCTTGTCTCTCATGTCTGTCTCCCAGGAACAGCATGTaGGTGTCCTTCATGTACTGG +
Preference number: 5 (lower is better)
Translates to: GNKMDLRGKEDACLSCLSPRNSM*VSFMYW
Trigger: CCAGTACATGAAGGACACCAACATGCTGTTCCTGGG...AGACAGACATGAGAGACAAGCATCTTCTTTCCCCCGCAAGTCCATTTTATTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS GCA 90 bp AGTATCAAAAGGTGCTCCTTCTACTGGGCGTCTGTTTGGACAGTCTaGTTAGGAGAAGAGGAGACAGGCCACTTTGCTATTTTGAACACT +
Preference number: 5 (lower is better)
Translates to: SIKRCSFYWASVWTV*LGEEETGHFAILNT
Trigger: AGTGTTCAAAATAGCAAAGTGGCCTGTCTCCTCTTCTCCTAAGCAGACTGTCCAAACAGACGCCCAGTAGAAGGAGCACCTTTTGATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS GCA 90 bp ACACAAACAGTATTCAGAAGAAACACTCCCTTTGCTTGTAACCCCTaGTCCCTTCTCTGCTGTCTATCAGGAAGACTCCTCATGGTCCTT +
Preference number: 5 (lower is better)
Translates to: TQTVFRRNTPFACNP*SLLCCLSGRLLMVL
Trigger: AAGGACCATGAGGAGTCTTCCTGATAGACAGCAGAGAAGGGAGCAGGGGTTACAAGCAAAGGGAGTGTTTCTTCTGAATACTGTTTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574824.5
CDS CCA 90 bp CACTTAGGTTTGCTTTTTATACATGCAGACGCCCAGGCAGCCGAATaGAAATTCACCACCTTCAATCCTGTGTTCAGGCCCTCTGTAAAT +
Preference number: 5 (lower is better)
Translates to: HLGLLFIHADAQAAE*KFTTFNPVFRPSVN
Trigger: ATTTACAGAGGGCCTGAACACAGGATTGAAGGTGGTGAATTTCCATTCGGCTGCCTGGGCGTCTGCATGTATAAAAAGCAAACCTAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS-3UTR CAA 90 bp GGAAATAAAATGGACTTGCGGGGGAAAGAAGATGCTTGTCTCTCATGTCTGTCTAAGTTCACGAGGTCCTaGCTGTCAGGAAACAACTCG +
Preference number: 5 (lower is better)
Translates to: GNKMDLRGKEDACLSCLSKFTRS*LSGNNS
Trigger: CGAGTTGTTTCCTGACAGCAAGGACCTCGTGAACTT...AGACAGACATGAGAGACAAGCATCTTCTTTCCCCCGCAAGTCCATTTTATTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293800.10
ENST00000433363.7
CDS TCA 90 bp CCAGGTGGGAGAGTCTATAACCCACCTCAGAGAAAGAACAGTGTGTaGGGCTTGAGATCATCTCAGAAAAAGAAGAAAAGCTGCATTATA +
Preference number: 5 (lower is better)
Translates to: PGGRVYNPPQRKNSV*GLRSSQKKKKSCII
Trigger: TATAATGCAGCTTTTCTTCTTTTTCTGAGATGATCTCAAGCCTCACACACTGTTCTTTCTCTGAGGTGGGTTATAGACTCTCCCACCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS GCA 90 bp GTCTGTTTGGACAGTCTGCTTAGGAGAAGAGGAGACAGGCCACTTTaGTATTTTGAACACTTTCACCTCCTTGCTATTTTTAACACTTTC +
Preference number: 5 (lower is better)
Translates to: VCLDSLLRRRGDRPL*YFEHFHLLAIFNTF
Trigger: GAAAGTGTTAAAAATAGCAAGGAGGTGAAAGTGTTCAAAATAGCAAAGTGGCCTGTCTCCTCTTCTCCTAAGCAGACTGTCCAAACAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS CCA 90 bp ATCATCTCAGAAAAAGAAGAAAAGCTGCATTATAAATGTCAACAATaGCTACAGGTCTGGATGTTCCGTGGCATTCCCAAGTCACATGAC +
Preference number: 5 (lower is better)
Translates to: IISEKEEKLHYKCQQ*LQVWMFRGIPKSHD
Trigger: GTCATGTGACTTGGGAATGCCACGGAACATCCAGACCTGTAGCCATTGTTGACATTTATAATGCAGCTTTTCTTCTTTTTCTGAGATGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS GCA 90 bp AATCTATCAAATCAATCATGTATCATGCACATGAGGGCAGACACATaGAAACATGTTTGTTGCAACCATGTAACGGCAAAACACAGGAAG +
Preference number: 5 (lower is better)
Translates to: NLSNQSCIMHMRADT*KHVCCNHVTAKHRK
Trigger: CTTCCTGTGTTTTGCCGTTACATGGTTGCAACAAACATGTTTGCATGTGTCTGCCCTCATGTGCATGATACATGATTGATTTGATAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS GCA 72 bp AGGGTCGGCTCACTGGGCCTCGATGTCCCTGTGCCATaGTCTGTCCCTGGCTGGGGTGTCCCGACCCCCAGG +
Preference number: 6 (lower is better)
Translates to: RVGSLGLDVPVP*SVPGWGVPTPR
Trigger: CCTGGGGGTCGGGACACCCCAGCCAGGGACAGAGCATGGCACAGGGACATCGAGGCCCAGTGAGCCGACCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS GCA 72 bp GACAAAGGGTCGGCTCACTGGGCCTCGATGTCCCTGTaGCATGCTCTGTCCCTGGCTGGGGTGTCCCGACCC +
Preference number: 6 (lower is better)
Translates to: DKGSAHWASMSL*HALSLAGVSRP
Trigger: GGGTCGGGACACCCCAGCCAGGGACAGAGCATGGCACAGGGACATCGAGGCCCAGTGAGCCGACCCTTTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS GCA 72 bp TGTTACGTGCAGGCTTGGCCCCCACCCAGAGGAGCGTaGGCAGGGCGATCCTCTTGTGCAGGTTCCAGCGCT +
Preference number: 6 (lower is better)
Translates to: CYVQAWPPPRGA*AGRSSCAGSSA
Trigger: AGCGCTGGAACCTGCACAAGAGGATCGCCCTGCGCACGCTCCTCTGGGTGGGGGCCAAGCCTGCACGTAACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293800.10
CDS CCA 72 bp GGCCTCGATGTCCCTGTGCCATGCTCTGTCCCTGGCTaGGGTGTCCCGACCCCCAGGACAGTGCGACTTCAT +
Preference number: 6 (lower is better)
Translates to: GLDVPVPCSVPG*GVPTPRTVRLH
Trigger: ATGAAGTCGCACTGTCCTGGGGGTCGGGACACCCCAGCCAGGGACAGAGCATGGCACAGGGACATCGAGGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS CCA 72 bp TGGGCTGTGAGCAGGGCAGGGCCTGACTCTGCTCTGTaGCTCTACATGCCCCAGCTGTCCAAGGCTAGGGAC +
Preference number: 6 (lower is better)
Translates to: WAVSRAGPDSAL*LYMPQLSKARD
Trigger: GTCCCTAGCCTTGGACAGCTGGGGCATGTAGAGCCACAGAGCAGAGTCAGGCCCTGCCCTGCTCACAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574824.5
CDS GCA 72 bp GACAAGATCAAGGTGATGGCTGCCGGGGGCACTGCGTaGAAGGGCTCCATCTGCTTCCCCATCCACACGGAC +
Preference number: 6 (lower is better)
Translates to: DKIKVMAAGGTA*KGSICFPIHTD
Trigger: GTCCGTGTGGATGGGGAAGCAGATGGAGCCCTTGCACGCAGTGCCCCCGGCAGCCATCACCTTGATCTTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000572727.1
ENST00000573648.5
CDS GCA 72 bp GCAGGGCAGGGCCTGACTCTGCTCTGTGGCTCTACATaGCCCAGCTGTCCAAGGCTAGGGACAGAAGGAGCT +
Preference number: 6 (lower is better)
Translates to: AGQGLTLLCGST*PSCPRLGTEGA
Trigger: AGCTCCTTCTGTCCCTAGCCTTGGACAGCTGGGGCATGTAGAGCCACAGAGCAGAGTCAGGCCCTGCCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574824.5
CDS CCA 72 bp CTCCTCTGGGACCACGCTCTCAGTGTGTGCACCAGGTaGGGCTGGCCTGACCCTTCTCAATCCTTCCCCCTA +
Preference number: 6 (lower is better)
Translates to: LLWDHALSVCTR*GWPDPSQSFPL
Trigger: TAGGGGGAAGGATTGAGAAGGGTCAGGCCAGCCCCACCTGGTGCACACACTGAGAGCGTGGTCCCAGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574824.5
CDS CCA 72 bp CAGTCCCCAGATGCTGACTTCAGGGACAGCTTGGAGTaGGGATGCAGGCTCGAGTGGTGTCTCCCTGCCTGG +
Preference number: 6 (lower is better)
Translates to: QSPDADFRDSLE*GCRLEWCLPAW
Trigger: CCAGGCAGGGAGACACCACTCGAGCCTGCATCCCCACTCCAAGCTGTCCCTGAAGTCAGCATCTGGGGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575230.1
CDS CCA 72 bp CCACCCAGTCCCCAGATGCTGACTTCAGGGACAGCTTaGAGTGGGGATGCAGGCTCGAGTGGTGTCTCCCTG +
Preference number: 6 (lower is better)
Translates to: PPSPQMLTSGTA*SGDAGSSGVSL
Trigger: CAGGGAGACACCACTCGAGCCTGCATCCCCACTCCAAGCTGTCCCTGAAGTCAGCATCTGGGGACTGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575230.1
CDS CAA 72 bp GCCACCCAGTCCCCAGATGCTGACTTCAGGGACAGCTaGGAGTGGGGATGCAGGCTCGAGTGGTGTCTCCCT +
Preference number: 6 (lower is better)
Translates to: ATQSPDADFRDS*EWGCRLEWCLP
Trigger: AGGGAGACACCACTCGAGCCTGCATCCCCACTCCAAGCTGTCCCTGAAGTCAGCATCTGGGGACTGGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575230.1
CDS GCA 72 bp CAAGGACAAGATCAAGGTGATGGCTGCCGGGGGCACTaGGTGCAAGGGCTCCATCTGCTTCCCCATCCACAC +
Preference number: 6 (lower is better)
Translates to: QGQDQGDGCRGH*VQGLHLLPHPH
Trigger: GTGTGGATGGGGAAGCAGATGGAGCCCTTGCACGCAGTGCCCCCGGCAGCCATCACCTTGATCTTGTCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000572727.1
ENST00000573648.5
CDS GCA 72 bp ACAACATCCCTCCTCTGGGACCACGCTCTCAGTGTGTaGACCAGGTGGGGCTGGCCTGACCCTTCTCAATCC +
Preference number: 6 (lower is better)
Translates to: TTSLLWDHALSV*TRWGWPDPSQS
Trigger: GGATTGAGAAGGGTCAGGCCAGCCCCACCTGGTGCACACACTGAGAGCGTGGTCCCAGAGGAGGGATGTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574824.5
CDS CCA 72 bp TTCGCTGGCGCGTCTCCCCGACCATCCTCGTTTTCCTaGCTGTGGGTACCTCATGGTGTCTGCACCTCACAC +
Preference number: 6 (lower is better)
Translates to: FAGASPRPSSFS*LWVPHGVCTSH
Trigger: GTGTGAGGTGCAGACACCATGAGGTACCCACAGCCAGGAAAACGAGGATGGTCGGGGAGACGCGCCAGCGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS CCA 72 bp AGTGCTCTCAGAGAGGAGGACAAAGGGTCGGCTCACTaGGCCTCGATGTCCCTGTGCCATGCTCTGTCCCTG +
Preference number: 6 (lower is better)
Translates to: SALREEDKGSAH*ASMSLCHALSL
Trigger: CAGGGACAGAGCATGGCACAGGGACATCGAGGCCCAGTGAGCCGACCCTTTGTCCTCCTCTCTGAGAGCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS CCA 72 bp GGTCCTTCAGAGCCTGCTCAAACAACATCCCTCCTCTaGGACCACGCTCTCAGTGTGTGCACCAGGTGGGGC +
Preference number: 6 (lower is better)
Translates to: GPSEPAQTTSLL*DHALSVCTRWG
Trigger: GCCCCACCTGGTGCACACACTGAGAGCGTGGTCCCAGAGGAGGGATGTTGTTTGAGCAGGCTCTGAAGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574824.5
CDS CAA 90 bp CCCGATTGGTCCCAGGTACATTTCTGGCCTCTTGGGCTCAAACACTaGCCTCTTTCCCAGCCCAGAGCTGCAAAGCTGCCCTTCTCCCAG +
Preference number: 6 (lower is better)
Translates to: PDWSQVHFWPLGLKH*PLSQPRAAKLPFSQ
Trigger: CTGGGAGAAGGGCAGCTTTGCAGCTCTGGGCTGGGAAAGAGGCAAGTGTTTGAGCCCAAGAGGCCAGAAATGTACCTGGGACCAATCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS TCA 72 bp GGTTTGGAAGTGGAAGCTCTCCAGCATGCTGCAGAATaGAACCCACTGGAGTGGCCTCCCACCCAAGCTGGC +
Preference number: 6 (lower is better)
Translates to: GLEVEALQHAAE*NPLEWPPTQAG
Trigger: GCCAGCTTGGGTGGGAGGCCACTCCAGTGGGTTTCATTCTGCAGCATGCTGGAGAGCTTCCACTTCCAAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574824.5
CDS GCA 72 bp GGTGCCTCACATACAGGTGACTCCCAGGACAGGCAGTaGCTTGGACAACCGGAGACCATACTCAGAGGAGCA +
Preference number: 6 (lower is better)
Translates to: GASHTGDSQDRQ*LGQPETILRGA
Trigger: TGCTCCTCTGAGTATGGTCTCCGGTTGTCCAAGGCACTGCCTGTCCTGGGAGTCACCTGTATGTGAGGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574824.5
CDS GCA 72 bp ACTCCCTGGGAAGCAACTGGGGACTGGGTCCACCCCTaGAGGGATGCACAGGTGTTGAGGCCAATTCAAGAT +
Preference number: 6 (lower is better)
Translates to: TPWEATGDWVHP*RDAQVLRPIQD
Trigger: ATCTTGAATTGGCCTCAACACCTGTGCATCCCTGCAGGGGTGGACCCAGTCCCCAGTTGCTTCCCAGGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574824.5
CDS CCA 72 bp CCGTTTTCAAAGAGCCCGTTAGGGCCTGCATTTGCCTaGTTGGAACCCTCGGTGCTCCCAGTTAGGGCTGGA +
Preference number: 6 (lower is better)
Translates to: PFSKSPLGPAFA*LEPSVLPVRAG
Trigger: TCCAGCCCTAACTGGGAGCACCGAGGGTTCCAACCAGGCAAATGCAGGCCCTAACGGGCTCTTTGAAAACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS TCA 72 bp CCACGTCTCTGGCAGATAATTCCACCTACGGAACACTaGAGGCTGAGGTCAGAGGCCACCTGCCCTAGAAGG +
Preference number: 6 (lower is better)
Translates to: PRLWQIIPPTEH*RLRSEATCPRR
Trigger: CCTTCTAGGGCAGGTGGCCTCTGACCTCAGCCTTCAGTGTTCCGTAGGTGGAATTATCTGCCAGAGACGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS TCA 72 bp GTGCCAGCTTCCCTGTGGACCTCCTCAGGCTCTTTCTaGTGCCTGCTCTGCAAGCTTCCCTCATGGTCACTA +
Preference number: 6 (lower is better)
Translates to: VPASLWTSSGSF*CLLCKLPSWSL
Trigger: TAGTGACCATGAGGGAAGCTTGCAGAGCAGGCATCAGAAAGAGCCTGAGGAGGTCCACAGGGAAGCTGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS GCA 72 bp TCCTCGTTTTCCTGGCTGTGGGTACCTCATGGTGTCTaGACCTCACACTCCTCTGCAGCCCAGCTCAATGAC +
Preference number: 6 (lower is better)
Translates to: SSFSWLWVPHGV*TSHSSAAQLND
Trigger: GTCATTGAGCTGGGCTGCAGAGGAGTGTGAGGTGCAGACACCATGAGGTACCCACAGCCAGGAAAACGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS GCA 72 bp AACCTTACAGTGCCGCGTGCACATGTCTGTCTGTCTTaGCACAGACTGAGAGAGCCTAGAGGCCAGGGACCA +
Preference number: 6 (lower is better)
Translates to: NLTVPRAHVCLS*HRLREPRGQGP
Trigger: TGGTCCCTGGCCTCTAGGCTCTCTCAGTCTGTGGCAAGACAGACAGACATGTGCACGCGGCACTGTAAGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS GCA 72 bp GGACAGTGCGACTTCATGTCCCCCAGGTATCCTCAGTaGTCAAGGCATCCCTGGGAAGTAGGCAGAGTGGAT +
Preference number: 6 (lower is better)
Translates to: GQCDFMSPRYPQ*SRHPWEVGRVD
Trigger: ATCCACTCTGCCTACTTCCCAGGGATGCCTTGAGCACTGAGGATACCTGGGGGACATGAAGTCGCACTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS CCA 72 bp ATGTCCCCCAGGTATCCTCAGTGCTCAAGGCATCCCTaGGAAGTAGGCAGAGTGGATGGGTTCTCTATGCCC +
Preference number: 6 (lower is better)
Translates to: MSPRYPQCSRHP*EVGRVDGFSMP
Trigger: GGGCATAGAGAACCCATCCACTCTGCCTACTTCCCAGGGATGCCTTGAGCACTGAGGATACCTGGGGGACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS CAA 72 bp GCACTCAGGGTACAGGGCAGCATGATGTACAGCGGATaGAGGCCGATGGAGCGAGACTGCGGAAAAACAGCA +
Preference number: 6 (lower is better)
Translates to: ALRVQGSMMYSG*RPMERDCGKTA
Trigger: TGCTGTTTTTCCGCAGTCTCGCTCCATCGGCCTCAATCCGCTGTACATCATGCTGCCCTGTACCCTGAGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS CAA 72 bp ATGTACTGGACACACACCTGCCTGGAGTCCAGAATCTaGGCGGGCATCAGAATGACGAGTGGCAGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: MYWTHTCLESRI*AGIRMTSGSSR
Trigger: CCTGCTGCTGCCACTCGTCATTCTGATGCCCGCCAAGATTCTGGACTCCAGGCAGGTGTGTGTCCAGTACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572352.5
CDS CAA 90 bp AAAAGCCCGTTTTCAAAGAGCCCGTTAGGGCCTGCATTTGCCTGGTaGGAACCCTCGGTGCTCCCAGTTAGGGCTGGAGATGACAAAGCC +
Preference number: 6 (lower is better)
Translates to: KSPFSKSPLGPAFAW*EPSVLPVRAGDDKA
Trigger: GGCTTTGTCATCTCCAGCCCTAACTGGGAGCACCGAGGGTTCCAACCAGGCAAATGCAGGCCCTAACGGGCTCTTTGAAAACGGGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS CAA 90 bp GCAAAGGAGGCACTCAGGGTACAGGGCAGCATGATGTACAGCGGATaGAGGCCGATGGAGCGAGACTGCGGAAAAACAGCACTGCAACAT +
Preference number: 6 (lower is better)
Translates to: AKEALRVQGSMMYSG*RPMERDCGKTALQH
Trigger: ATGTTGCAGTGCTGTTTTTCCGCAGTCTCGCTCCATCGGCCTCAATCCGCTGTACATCATGCTGCCCTGTACCCTGAGTGCCTCCTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS TCA 72 bp CCATTCAGGGAAACGGTCACAGAGCCCAGTGTTCCGTaGGTCCAGGTTCATTGCTCACCCCAGTGCCTTAAC +
Preference number: 6 (lower is better)
Translates to: PFRETVTEPSVP*VQVHCSPQCLN
Trigger: GTTAAGGCACTGGGGTGAGCAATGAACCTGGACTCACGGAACACTGGGCTCTGTGACCGTTTCCCTGAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS GCA 72 bp AGGAGGCATCACCACCACGTGCCCAGTATCAAAAGGTaGTCCTTCTACTGGGCGTCTGTTTGGACAGTCTGC +
Preference number: 6 (lower is better)
Translates to: RRHHHHVPSIKR*SFYWASVWTVC
Trigger: GCAGACTGTCCAAACAGACGCCCAGTAGAAGGAGCACCTTTTGATACTGGGCACGTGGTGGTGATGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS GCA 72 bp CTAGAAAAGCCCGTTTTCAAAGAGCCCGTTAGGGCCTaGATTTGCCTGGTTGGAACCCTCGGTGCTCCCAGT +
Preference number: 6 (lower is better)
Translates to: LEKPVFKEPVRA*ICLVGTLGAPS
Trigger: ACTGGGAGCACCGAGGGTTCCAACCAGGCAAATGCAGGCCCTAACGGGCTCTTTGAAAACGGGCTTTTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS GCA 72 bp TCTACTCCCAGGCAGTGCTCTCTCTCTCCCTCTCCCTaGTTCTACCTCTTCAGGCACCCCTACAAATCTCTG +
Preference number: 6 (lower is better)
Translates to: STPRQCSLSPSP*FYLFRHPYKSL
Trigger: CAGAGATTTGTAGGGGTGCCTGAAGAGGTAGAAGCAGGGAGAGGGAGAGAGAGAGCACTGCCTGGGAGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS GCA 72 bp TGCTCACCCCAGTGCCTTAACTATCCTACAAGGACGTaGCAGCTTCCCTGTGGACCTCCTCAGGCTCTTTCT +
Preference number: 6 (lower is better)
Translates to: CSPQCLNYPTRT*QLPCGPPQALS
Trigger: AGAAAGAGCCTGAGGAGGTCCACAGGGAAGCTGGCACGTCCTTGTAGGATAGTTAAGGCACTGGGGTGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS GCA 72 bp GAACTTGGGTTTGGAAGTGGAAGCTCTCCAGCATGCTaGAGAATGAAACCCACTGGAGTGGCCTCCCACCCA +
Preference number: 6 (lower is better)
Translates to: ELGFGSGSSPAC*RMKPTGVASHP
Trigger: TGGGTGGGAGGCCACTCCAGTGGGTTTCATTCTGCAGCATGCTGGAGAGCTTCCACTTCCAAACCCAAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574824.5
CDS CCA 72 bp AACACCCGATTGGTCCCAGGTACATTTCTGGCCTCTTaGGCTCAAACACTTGCCTCTTTCCCAGCCCAGAGC +
Preference number: 6 (lower is better)
Translates to: NTRLVPGTFLAS*AQTLASFPAQS
Trigger: GCTCTGGGCTGGGAAAGAGGCAAGTGTTTGAGCCCAAGAGGCCAGAAATGTACCTGGGACCAATCGGGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS CAA 72 bp TTTTCAAAGAGCCCGTTAGGGCCTGCATTTGCCTGGTaGGAACCCTCGGTGCTCCCAGTTAGGGCTGGAGAT +
Preference number: 6 (lower is better)
Translates to: FSKSPLGPAFAW*EPSVLPVRAGD
Trigger: ATCTCCAGCCCTAACTGGGAGCACCGAGGGTTCCAACCAGGCAAATGCAGGCCCTAACGGGCTCTTTGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS CAA 90 bp GTCCCTGAGATACCCAGCAGAGGCTCTGAGATAACGAACACCCGATaGGTCCCAGGTACATTTCTGGCCTCTTGGGCTCAAACACTTGCC +
Preference number: 6 (lower is better)
Translates to: VPEIPSRGSEITNTR*VPGTFLASWAQTLA
Trigger: GGCAAGTGTTTGAGCCCAAGAGGCCAGAAATGTACCTGGGACCAATCGGGTGTTCGTTATCTCAGAGCCTCTGCTGGGTATCTCAGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS TCA 72 bp TCTGACTGCGAGACCAGGGATCTTTCCATACTACCCTaGAGCTGGTACGTCATGGAGGCAAAGATGGGCAGG +
Preference number: 6 (lower is better)
Translates to: SDCETRDLSILP*SWYVMEAKMGR
Trigger: CCTGCCCATCTTTGCCTCCATGACGTACCAGCTTCAGGGTAGTATGGAAAGATCCCTGGTCTCGCAGTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572727.1
CDS GCA 72 bp GTCTATCAGGAAGACTCCTCATGGTCCTTCAGAGCCTaGTCAAACAACATCCCTCCTCTGGGACCACGCTCT +
Preference number: 6 (lower is better)
Translates to: VYQEDSSWSFRA*SNNIPPLGPRS
Trigger: AGAGCGTGGTCCCAGAGGAGGGATGTTGTTTGAGCAGGCTCTGAAGGACCATGAGGAGTCTTCCTGATAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574824.5
CDS GCA 72 bp GGAAGCAACTGGGGACTGGGTCCACCCCTGCAGGGATaGACAGGTGTTGAGGCCAATTCAAGATCAGATATT +
Preference number: 6 (lower is better)
Translates to: GSNWGLGPPLQG*TGVEANSRSDI
Trigger: AATATCTGATCTTGAATTGGCCTCAACACCTGTGCATCCCTGCAGGGGTGGACCCAGTCCCCAGTTGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574824.5
CDS CCA 72 bp GTGCTCAAGGCATCCCTGGGAAGTAGGCAGAGTGGATaGGTTCTCTATGCCCGTGCGCATTTGGAAAATGAC +
Preference number: 6 (lower is better)
Translates to: VLKASLGSRQSG*VLYARAHLEND
Trigger: GTCATTTTCCAAATGCGCACGGGCATAGAGAACCCATCCACTCTGCCTACTTCCCAGGGATGCCTTGAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS CAA 72 bp GAGCCAACGCGCCTGGCCCTAAGCCAGCGATTTCTATaGAATCCAAGACTTACTTTGTCTCACCCTCCACCC +
Preference number: 6 (lower is better)
Translates to: EPTRLALSQRFL*NPRLTLSHPPP
Trigger: GGGTGGAGGGTGAGACAAAGTAAGTCTTGGATTCAATAGAAATCGCTGGCTTAGGGCCAGGCGCGTTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574824.5
CDS TCA 72 bp TGCTTCTACCTCTTCAGGCACCCCTACAAATCTCTGTaGCTGTCATTAGCATCCCCCTGCTGCCTAAGCCTG +
Preference number: 6 (lower is better)
Translates to: CFYLFRHPYKSL*LSLASPCCLSL
Trigger: CAGGCTTAGGCAGCAGGGGGATGCTAATGACAGTCACAGAGATTTGTAGGGGTGCCTGAAGAGGTAGAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS GCA 72 bp GATTCTCTGAATGTGCCGGGTACGTTTGAACCTCTGTaGCTCAGTCTTGGTTCCTCTCCCTTTTGCCACGTC +
Preference number: 6 (lower is better)
Translates to: DSLNVPGTFEPL*LSLGSSPFCHV
Trigger: GACGTGGCAAAAGGGAGAGGAACCAAGACTGAGGCACAGAGGTTCAAACGTACCCGGCACATTCAGAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS GCA 72 bp AACACTTGCCTCTTTCCCAGCCCAGAGCTGCAAAGCTaGCCTTCTCCCAGCAAAGGTGACAGAGCTAATGAA +
Preference number: 6 (lower is better)
Translates to: NTCLFPSPELQS*PSPSKGDRANE
Trigger: TTCATTAGCTCTGTCACCTTTGCTGGGAGAAGGGCAGCTTTGCAGCTCTGGGCTGGGAAAGAGGCAAGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS GCA 72 bp CCTCCGCCCCGCACATACACTTTGACCCCTCCATGCTaGAGTGGAGCTATCACACAAACAGTATTCAGAAGA +
Preference number: 6 (lower is better)
Translates to: PPPRTYTLTPPC*SGAITQTVFRR
Trigger: TCTTCTGAATACTGTTTGTGTGATAGCTCCACTGCAGCATGGAGGGGTCAAAGTGTATGTGCGGGGCGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574824.5
CDS CCA 72 bp CACCACGTGCCCAGTATCAAAAGGTGCTCCTTCTACTaGGCGTCTGTTTGGACAGTCTGCTTAGGAGAAGAG +
Preference number: 6 (lower is better)
Translates to: HHVPSIKRCSFY*ASVWTVCLGEE
Trigger: CTCTTCTCCTAAGCAGACTGTCCAAACAGACGCCCAGTAGAAGGAGCACCTTTTGATACTGGGCACGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS CAA 72 bp AGGCAGAGTGGATGGGTTCTCTATGCCCGTGCGCATTaGGAAAATGACCTCAGAGAAGTGACAGGAGGCAAC +
Preference number: 6 (lower is better)
Translates to: RQSGWVLYARAH*ENDLREVTGGN
Trigger: GTTGCCTCCTGTCACTTCTCTGAGGTCATTTTCCAAATGCGCACGGGCATAGAGAACCCATCCACTCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS CAA 90 bp CCACGTGCCCAGTATCAAAAGGTGCTCCTTCTACTGGGCGTCTGTTaGGACAGTCTGCTTAGGAGAAGAGGAGACAGGCCACTTTGCTAT +
Preference number: 6 (lower is better)
Translates to: PRAQYQKVLLLLGVC*DSLLRRRGDRPLCY
Trigger: ATAGCAAAGTGGCCTGTCTCCTCTTCTCCTAAGCAGACTGTCCAAACAGACGCCCAGTAGAAGGAGCACCTTTTGATACTGGGCACGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS TCA 72 bp AATGACCATCACCTTTTCCTTTCTCATAGGTGGGCGTaGGACAGGAGTGTGATGGGCCTTAGAGGTAGCTGG +
Preference number: 6 (lower is better)
Translates to: NDHHLFLSHRWA*DRSVMGLRGSW
Trigger: CCAGCTACCTCTAAGGCCCATCACACTCCTGTCTCACGCCCACCTATGAGAAAGGAAAAGGTGATGGTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS GCA 72 bp AGGTGCTCCTTCTACTGGGCGTCTGTTTGGACAGTCTaGTTAGGAGAAGAGGAGACAGGCCACTTTGCTATT +
Preference number: 6 (lower is better)
Translates to: RCSFYWASVWTV*LGEEETGHFAI
Trigger: AATAGCAAAGTGGCCTGTCTCCTCTTCTCCTAAGCAGACTGTCCAAACAGACGCCCAGTAGAAGGAGCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS GCA 72 bp ATGATGTACAGCGGATTGAGGCCGATGGAGCGAGACTaGGGAAAAACAGCACTGCAACATCACCGTACAGAA +
Preference number: 6 (lower is better)
Translates to: MMYSGLRPMERD*GKTALQHHRTE
Trigger: TTCTGTACGGTGATGTTGCAGTGCTGTTTTTCCGCAGTCTCGCTCCATCGGCCTCAATCCGCTGTACATCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS CCA 72 bp TCCCCCTGCTGCCTAAGCCTGCCCTGCCTATCTTCATaGTTCTTGCTAATTTGTCAAGTTCATCCTTGGCCA +
Preference number: 6 (lower is better)
Translates to: SPCCLSLPCLSS*FLLICQVHPWP
Trigger: TGGCCAAGGATGAACTTGACAAATTAGCAAGAACCATGAAGATAGGCAGGGCAGGCTTAGGCAGCAGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS CAA 72 bp AAAGAACTGAAGGGCCATGTTCAGAGATCCCACATCTaGAACTCGGGTCTTCTGACTGCGAGACCAGGGATC +
Preference number: 6 (lower is better)
Translates to: KELKGHVQRSHI*NSGLLTARPGI
Trigger: GATCCCTGGTCTCGCAGTCAGAAGACCCGAGTTCAAGATGTGGGATCTCTGAACATGGCCCTTCAGTTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS TCA 72 bp TCTGACTGCGAGACCAGGGATCTTTCCATACTACCCTaGAGCTGGTACGTCTTTGCAATGGATGACAGAAGG +
Preference number: 6 (lower is better)
Translates to: SDCETRDLSILP*SWYVFAMDDRR
Trigger: CCTTCTGTCATCCATTGCAAAGACGTACCAGCTTCAGGGTAGTATGGAAAGATCCCTGGTCTCGCAGTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS TCA 72 bp GAAGCTCTTGGGGACGTGATTCTGAAAAGGATTCTCTaGATGTGCCGGGTACGTTTGAACCTCTGTGCCTCA +
Preference number: 6 (lower is better)
Translates to: EALGDVILKRIL*MCRVRLNLCAS
Trigger: TGAGGCACAGAGGTTCAAACGTACCCGGCACATTCAGAGAATCCTTTTCAGAATCACGTCCCCAAGAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS TCA 72 bp GTTCTTGCTAATTTGTCAAGTTCATCCTTGGCCATATaGGTCCCTCAGCCCCACCTTCACCCCTTCCAAGGA +
Preference number: 6 (lower is better)
Translates to: VLANLSSSSLAI*VPQPHLHPFQG
Trigger: TCCTTGGAAGGGGTGAAGGTGGGGCTGAGGGACTCATATGGCCAAGGATGAACTTGACAAATTAGCAAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS CCA 72 bp TTGCTTTTTATACATGCAGACGCCCAGGCAGCCGAATaGAAATTCACCACCTTCAATCCTGTGTTCAGGCCC +
Preference number: 6 (lower is better)
Translates to: LLFIHADAQAAE*KFTTFNPVFRP
Trigger: GGGCCTGAACACAGGATTGAAGGTGGTGAATTTCCATTCGGCTGCCTGGGCGTCTGCATGTATAAAAAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS CCA 72 bp GCCCCGCACATACACTTTGACCCCTCCATGCTGCAGTaGAGCTATCACACAAACAGTATTCAGAAGAAACAC +
Preference number: 6 (lower is better)
Translates to: APHIHFDPSMLQ*SYHTNSIQKKH
Trigger: GTGTTTCTTCTGAATACTGTTTGTGTGATAGCTCCACTGCAGCATGGAGGGGTCAAAGTGTATGTGCGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574824.5
CDS TCA 72 bp GTCTCAATATGTGTCACATTAGCCCAGTCAGGGAAATaGTCCAAGTCAAATATGGCCCGTCCCCAGGTGTTG +
Preference number: 6 (lower is better)
Translates to: VSICVTLAQSGK*SKSNMARPQVL
Trigger: CAACACCTGGGGACGGGCCATATTTGACTTGGATCATTTCCCTGACTGGGCTAATGTGACACATATTGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
ENST00000574580.2
CDS CCA 72 bp TCTTCATGGTTCTTGCTAATTTGTCAAGTTCATCCTTaGCCATATGAGTCCCTCAGCCCCACCTTCACCCCT +
Preference number: 6 (lower is better)
Translates to: SSWFLLICQVHP*PYESLSPTFTP
Trigger: AGGGGTGAAGGTGGGGCTGAGGGACTCATATGGCCAAGGATGAACTTGACAAATTAGCAAGAACCATGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS CAA 90 bp AATGGAGTTTTCCTTTCTTCCTCAGTCTGGCTGCGGAAGTTAAACTaGGGCTTCTGTGAAGGCACAATGAATAGCAGGGTGGCCACAAAG +
Preference number: 6 (lower is better)
Translates to: NGVFLSSSVWLRKLN*GFCEGTMNSRVATK
Trigger: CTTTGTGGCCACCCTGCTATTCATTGTGCCTTCACAGAAGCCCAAGTTTAACTTCCGCAGCCAGACTGAGGAAGAAAGGAAAACTCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000572727.1
ENST00000573648.5
CDS CAA 90 bp GCAGTGGAGCTATCACACAAACAGTATTCAGAAGAAACACTCCCTTaGCTTGTAACCCCTGCTCCCTTCTCTGCTGTCTATCAGGAAGAC +
Preference number: 6 (lower is better)
Translates to: AVELSHKQYSEETLP*LVTPAPFSAVYQED
Trigger: GTCTTCCTGATAGACAGCAGAGAAGGGAGCAGGGGTTACAAGCAAAGGGAGTGTTTCTTCTGAATACTGTTTGTGTGATAGCTCCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574824.5
CDS TCA 72 bp AGGAGGAGGGGGAGAGTTTGCATGAATGGAGTTGTCTaGGAAGAACCAAGGCTTCTACATGATATCTCAAGG +
Preference number: 6 (lower is better)
Translates to: RRRGRVCMNGVV*EEPRLLHDISR
Trigger: CCTTGAGATATCATGTAGAAGCCTTGGTTCTTCTCAGACAACTCCATTCATGCAAACTCTCCCCCTCCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574824.5
CDS CCA 72 bp GCACTGCAACATCACCGTACAGAACACAGAAGCTCTTaGGGACGTGATTCTGAAAAGGATTCTCTGAATGTG +
Preference number: 6 (lower is better)
Translates to: ALQHHRTEHRSS*GRDSEKDSLNV
Trigger: CACATTCAGAGAATCCTTTTCAGAATCACGTCCCCAAGAGCTTCTGTGTTCTGTACGGTGATGTTGCAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS CCA 72 bp GCTTCACTACCCTGTTGTAGATATTTTACTGGGGATTaGAGTCAAGTTTGCAGTCCATGGTTTCTGGGACCC +
Preference number: 6 (lower is better)
Translates to: ASLPCCRYFTGD*SQVCSPWFLGP
Trigger: GGGTCCCAGAAACCATGGACTGCAAACTTGACTCCAATCCCCAGTAAAATATCTACAACAGGGTAGTGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS CAA 72 bp CATGCACATGAGGGCAGACACATGCAAACATGTTTGTaGCAACCATGTAACGGCAAAACACAGGAAGCCAAC +
Preference number: 6 (lower is better)
Translates to: HAHEGRHMQTCL*QPCNGKTQEAN
Trigger: GTTGGCTTCCTGTGTTTTGCCGTTACATGGTTGCAACAAACATGTTTGCATGTGTCTGCCCTCATGTGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS CAA 72 bp TATCATGCACATGAGGGCAGACACATGCAAACATGTTaGTTGCAACCATGTAACGGCAAAACACAGGAAGCC +
Preference number: 6 (lower is better)
Translates to: YHAHEGRHMQTC*LQPCNGKTQEA
Trigger: GGCTTCCTGTGTTTTGCCGTTACATGGTTGCAACAAACATGTTTGCATGTGTCTGCCCTCATGTGCATGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS CAA 90 bp ATCATGTATCATGCACATGAGGGCAGACACATGCAAACATGTTTGTaGCAACCATGTAACGGCAAAACACAGGAAGCCAACTCAATGGTC +
Preference number: 6 (lower is better)
Translates to: IMYHAHEGRHMQTCL*QPCNGKTQEANSMV
Trigger: GACCATTGAGTTGGCTTCCTGTGTTTTGCCGTTACATGGTTGCAACAAACATGTTTGCATGTGTCTGCCCTCATGTGCATGATACATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS TCA 72 bp AATGATCCAAGTCAAATATGGCCCGTCCCCAGGTGTTaGCAGCCAAAAACACACAGAAGACTCCAATTATGT +
Preference number: 6 (lower is better)
Translates to: NDPSQIWPVPRC*QPKTHRRLQLC
Trigger: ACATAATTGGAGTCTTCTGTGTGTTTTTGGCTGTCAACACCTGGGGACGGGCCATATTTGACTTGGATCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000293800.10
ENST00000381074.8
ENST00000433363.7
ENST00000573648.5
ENST00000574580.2
CDS CAA 72 bp CTATCACACAAACAGTATTCAGAAGAAACACTCCCTTaGCTTGTAACCCCTGCTCCCTTCTCTGCTGTCTAT +
Preference number: 6 (lower is better)
Translates to: LSHKQYSEETLP*LVTPAPFSAVY
Trigger: ATAGACAGCAGAGAAGGGAGCAGGGGTTACAAGCAAAGGGAGTGTTTCTTCTGAATACTGTTTGTGTGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574824.5
CDS CAA 90 bp TCAATCATGTATCATGCACATGAGGGCAGACACATGCAAACATGTTaGTTGCAACCATGTAACGGCAAAACACAGGAAGCCAACTCAATG +
Preference number: 6 (lower is better)
Translates to: SIMYHAHEGRHMQTC*LQPCNGKTQEANSM
Trigger: CATTGAGTTGGCTTCCTGTGTTTTGCCGTTACATGGTTGCAACAAACATGTTTGCATGTGTCTGCCCTCATGTGCATGATACATGATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS TCA 72 bp ATATTCCCAGACATGAAATTGCTGAGTCAAGGGGTCTaGGCAGGTTTAATGTTACGGTTCCTGTTGGTAAAC +
Preference number: 6 (lower is better)
Translates to: IFPDMKLLSQGV*AGLMLRFLLVN
Trigger: GTTTACCAACAGGAACCGTAACATTAAACCTGCTCAGACCCCTTGACTCAGCAATTTCATGTCTGGGAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS TCA 72 bp AGCAAAGGTGACAGAGCTAATGAAGAGTTCTTCCTCTaGCTACATTTGTTTCCAAGGCATCATCTACTCCCA +
Preference number: 6 (lower is better)
Translates to: SKGDRANEEFFL*LHLFPRHHLLP
Trigger: TGGGAGTAGATGATGCCTTGGAAACAAATGTAGTCAGAGGAAGAACTCTTCATTAGCTCTGTCACCTTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS CAA 72 bp AATTCCAGAATAATGACAGCCTCTCCCATGCTCATTTaGCAGTCTACAGAGGCTTTTCATAGCCCTCATCTT +
Preference number: 6 (lower is better)
Translates to: NSRIMTASPMLI*QSTEAFHSPHL
Trigger: AAGATGAGGGCTATGAAAAGCCTCTGTAGACTGCAAAATGAGCATGGGAGAGGCTGTCATTATTCTGGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS TCA 72 bp AGAGTCTATAACCCACCTCAGAGAAAGAACAGTGTGTaGGGCTTGAGATCATCTCAGAAAAAGAAGAAAAGC +
Preference number: 6 (lower is better)
Translates to: RVYNPPQRKNSV*GLRSSQKKKKS
Trigger: GCTTTTCTTCTTTTTCTGAGATGATCTCAAGCCTCACACACTGTTCTTTCTCTGAGGTGGGTTATAGACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS CAA 90 bp TGGACAGTCTGCTTAGGAGAAGAGGAGACAGGCCACTTTGCTATTTaGAACACTTTCACCTCCTTGCTATTTTTAACACTTTCATCTTCA +
Preference number: 6 (lower is better)
Translates to: WTVCLGEEETGHFAI*NTFTSLLFLTLSSS
Trigger: TGAAGATGAAAGTGTTAAAAATAGCAAGGAGGTGAAAGTGTTCAAAATAGCAAAGTGGCCTGTCTCCTCTTCTCCTAAGCAGACTGTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS GCA 72 bp AATCAATCATGTATCATGCACATGAGGGCAGACACATaGAAACATGTTTGTTGCAACCATGTAACGGCAAAA +
Preference number: 6 (lower is better)
Translates to: NQSCIMHMRADT*KHVCCNHVTAK
Trigger: TTTTGCCGTTACATGGTTGCAACAAACATGTTTGCATGTGTCTGCCCTCATGTGCATGATACATGATTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574580.2
CDS TCA 72 bp CCTAAAATCTATCAAATCAATCATGTATCATGCACATaGGGGCAGACACATGCAAACATGTTTGTTGCAACC +
Preference number: 6 (lower is better)
Translates to: PKIYQINHVSCT*GQTHANMFVAT
Trigger: GGTTGCAACAAACATGTTTGCATGTGTCTGCCCTCATGTGCATGATACATGATTGATTTGATAGATTTTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574580.2