RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC13A3 (Homo sapiens)

Ensembl gene IDs: ENSG00000158296

Ensembl transcript IDs: ENST00000279027.9, ENST00000290317.9, ENST00000372121.5, ENST00000413164.6, ENST00000417157.2, ENST00000420568.5, ENST00000450298.5, ENST00000464518.1, ENST00000468915.5, ENST00000472148.5, ENST00000495082.5

Found 656 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCTTACCACTTAAGGTGGGGCATGGAGAGATCAAGGCCACCTGCTaGGACAAGCAGCAACTGACCGCCTTGCAGCCACAGAGGCCTATG +
Preference number: 1 (lower is better)
Translates to: CLPLKVGHGEIKATC*DKQQLTALQPQRPM
Trigger: CATAGGCCTCTGTGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCCAGCAGGTGGCCTTGATCTCTCCATGCCCCACCTTAAGTGGTAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR TCA 90 bp GGGATGCCAGAATGCTTCTGCTTGGAACAAAGAGGGATTAACCCTTaGAGGCAGACACCACTTCCAGCCTCGGGCTCACGGGGACGTCTC +
Preference number: 1 (lower is better)
Translates to: GMPECFCLEQRGINP*RQTPLPASGSRGRL
Trigger: GAGACGTCCCCGTGAGCCCGAGGCTGGAAGTGGTGTCTGCCTTCAAGGGTTAATCCCTCTTTGTTCCAAGCAGAAGCATTCTGGCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR CCA 90 bp ACCCTCAGAGGCTTAGGAAAGGGAAGTGTGACGAGTCAGGGCCCCTaGGCTGGTGTCTTTTCCAATACTGGGCTAATGCTGGGCCATTCC +
Preference number: 1 (lower is better)
Translates to: TLRGLGKGSVTSQGP*AGVFSNTGLMLGHS
Trigger: GGAATGGCCCAGCATTAGCCCAGTATTGGAAAAGACACCAGCCCAGGGGCCCTGACTCGTCACACTTCCCTTTCCTAAGCCTCTGAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR CCA 90 bp CAGAGGCTTAGGAAAGGGAAGTGTGACGAGTCAGGGCCCCTGGGCTaGTGTCTTTTCCAATACTGGGCTAATGCTGGGCCATTCCATTCA +
Preference number: 1 (lower is better)
Translates to: QRLRKGKCDESGPLG*CLFQYWANAGPFHS
Trigger: TGAATGGAATGGCCCAGCATTAGCCCAGTATTGGAAAAGACACCAGCCCAGGGGCCCTGACTCGTCACACTTCCCTTTCCTAAGCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR TCA 90 bp TTCCAACTCAGAGGGCCTCTCCCACTGCTCTCAGGGAAATGCCCATaGTTCACTTATGCTGTATCAACAACAAGTGCAGCTGGGCGCTGC +
Preference number: 1 (lower is better)
Translates to: FQLRGPLPLLSGKCP*FTYAVSTTSAAGRC
Trigger: GCAGCGCCCAGCTGCACTTGTTGTTGATACAGCATAAGTGAATCATGGGCATTTCCCTGAGAGCAGTGGGAGAGGCCCTCTGAGTTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR TCA 90 bp CGCATCTCCCACCAGCCCCAGTGGGTTGTAACTGTGATTCAACACTaGGTGCTCACTTGGAAAGGAGGTGGAGCTCAACTTCCAACTCAG +
Preference number: 1 (lower is better)
Translates to: RISHQPQWVVTVIQH*VLTWKGGGAQLPTQ
Trigger: CTGAGTTGGAAGTTGAGCTCCACCTCCTTTCCAAGTGAGCACTCAGTGTTGAATCACAGTTACAACCCACTGGGGCTGGTGGGAGATGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR GCA 90 bp CTTGGGTCGAGATGTCAGCTGCGGTTTCTAGAACTTCCCCTGGTATaGTCAGGAGCCCAGAGAAACAGCAAAGAGGCTTTGCACAGTCTC +
Preference number: 1 (lower is better)
Translates to: LGSRCQLRFLELPLV*SGAQRNSKEALHSL
Trigger: GAGACTGTGCAAAGCCTCTTTGCTGTTTCTCTGGGCTCCTGAGCATACCAGGGGAAGTTCTAGAAACCGCAGCTGACATCTCGACCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR CCA 90 bp GGTTGTAACTGTGATTCAACACTGAGTGCTCACTTGGAAAGGAGGTaGAGCTCAACTTCCAACTCAGAGGGCCTCTCCCACTGCTCTCAG +
Preference number: 1 (lower is better)
Translates to: GCNCDSTLSAHLERR*SSTSNSEGLSHCSQ
Trigger: CTGAGAGCAGTGGGAGAGGCCCTCTGAGTTGGAAGTTGAGCTCCACCTCCTTTCCAAGTGAGCACTCAGTGTTGAATCACAGTTACAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR GCA 90 bp TTCCCCTGGTATGCTCAGGAGCCCAGAGAAACAGCAAAGAGGCTTTaGACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGT +
Preference number: 1 (lower is better)
Translates to: FPWYAQEPRETAKRL*TVSCPWKAICPFPC
Trigger: ACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGCAAAGCCTCTTTGCTGTTTCTCTGGGCTCCTGAGCATACCAGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR GCA 90 bp GTTGTGTTCACTGAGGTAAATGATCCAAAGCCACAGGGGCAGATCTaGCATCTATCTCTCAAGATGTGGCTCCTGTCTTTGGGTCCCAGG +
Preference number: 1 (lower is better)
Translates to: VVFTEVNDPKPQGQI*HLSLKMWLLSLGPR
Trigger: CCTGGGACCCAAAGACAGGAGCCACATCTTGAGAGATAGATGGCAGATCTGCCCCTGTGGCTTTGGATCATTTACCTCAGTGAACACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417157.2
3UTR TCA 90 bp GAGAGGTCAACTCTGTGGAATCCCCAGCCCAGGAATTTGGGGCTTTaGAGCTCTCTTATGTTCAGAAAGGCAAATCATCTCCAGGTCCAA +
Preference number: 1 (lower is better)
Translates to: ERSTLWNPQPRNLGL*SSLMFRKANHLQVQ
Trigger: TTGGACCTGGAGATGATTTGCCTTTCTGAACATAAGAGAGCTTCAAAGCCCCAAATTCCTGGGCTGGGGATTCCACAGAGTTGACCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
3UTR CCA 90 bp GAAAATCAGAGAGGTCAACTCTGTGGAATCCCCAGCCCAGGAATTTaGGGCTTTGAAGCTCTCTTATGTTCAGAAAGGCAAATCATCTCC +
Preference number: 1 (lower is better)
Translates to: ENQRGQLCGIPSPGI*GFEALLCSERQIIS
Trigger: GGAGATGATTTGCCTTTCTGAACATAAGAGAGCTTCAAAGCCCCAAATTCCTGGGCTGGGGATTCCACAGAGTTGACCTCTCTGATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
3UTR TCA 90 bp AATCATGATTCATCTGGTTACAAATCCCATGAGTTTCTCTTTGAATaGACCTCTTGCTTCCAGTCCCATACAACGCATCTCCCACCAGCC +
Preference number: 1 (lower is better)
Translates to: NHDSSGYKSHEFLFE*TSCFQSHTTHLPPA
Trigger: GGCTGGTGGGAGATGCGTTGTATGGGACTGGAAGCAAGAGGTTCATTCAAAGAGAAACTCATGGGATTTGTAACCAGATGAATCATGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR TCA 90 bp GGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATTATTTaGTTGTTTTGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCT +
Preference number: 1 (lower is better)
Translates to: GHPCLLHIGLQKRII*LFCSVLAAGDGDSP
Trigger: AGGGCTGTCACCATCACCTGCTGCTAGGACACTACAAAACAATCAAATAATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
3UTR CAA 90 bp GGAGAGATCAAGGCCACCTGCTGGGACAAGCAGCAACTGACCGCCTaGCAGCCACAGAGGCCTATGGGGGCCACATGTAGGAGAGTCCTG +
Preference number: 2 (lower is better)
Translates to: GEIKATCWDKQQLTA*QPQRPMGATCRRVL
Trigger: CAGGACTCTCCTACATGTGGCCCCCATAGGCCTCTGTGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCCAGCAGGTGGCCTTGATCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR TCA 90 bp AAGGCCACCTGCTGGGACAAGCAGCAACTGACCGCCTTGCAGCCACAGAGGCCTATGGTGACAGCCCTTTaGGAGGGTTCAGCCTCAAGG +
Preference number: 2 (lower is better)
Translates to: KATCWDKQQLTALQPQRPMVTAL*EGSASR
Trigger: CCTTGAGGCTGAACCCTCTCAAAGGGCTGTCACCAT...AGGCCTCTGTGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCCAGCAGGTGGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR TCA 90 bp GGCAGACACCACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATAGGGACAAGCAGCAACTaGCCGCCTTGCAGCCACAGA +
Preference number: 2 (lower is better)
Translates to: GRHHFQPRAHGDVSVLPIGTSSN*PPCSHR
Trigger: TCTGTGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCC...TATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGTGGTGTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR CCA 90 bp ACCCTCAGAGGCTTAGGAAAGGGAAGTGTGACGAGTCAGGGCCCCTGGGCTGGTAGCCACAGAGGCCTATaGGGGCCACATGTAGGAGAG +
Preference number: 2 (lower is better)
Translates to: TLRGLGKGSVTSQGPWAGSHRGL*GPHVGE
Trigger: CTCTCCTACATGTGGCCCCCATAGGCCTCTGTGGCT...ACCAGCCCAGGGGCCCTGACTCGTCACACTTCCCTTTCCTAAGCCTCTGAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR TCA 90 bp GGAGAGATCAAGGCCACCTGCTGGGACAAGCAGCAACTGACCGCCTTGCAGCCAATGGTGACAGCCCTTTaGGAGGGTTCAGCCTCAAGG +
Preference number: 2 (lower is better)
Translates to: GEIKATCWDKQQLTALQPMVTAL*EGSASR
Trigger: CCTTGAGGCTGAACCCTCTCAAAGGGCTGTCACCAT...TGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCCAGCAGGTGGCCTTGATCTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR TCA 90 bp ACCCTCAGAGGCTTAGGAAAGGGAAGTGTGACGAGTCAGGGCCCCTGGGCTGGTAATGGCTCATGGACTTaGGTGGGCCACTGGAGGTCA +
Preference number: 2 (lower is better)
Translates to: TLRGLGKGSVTSQGPWAGNGSWT*VGHWRS
Trigger: TGACCTCCAGTGGCCCACTCAAGTCCATGAGCCATT...ACCAGCCCAGGGGCCCTGACTCGTCACACTTCCCTTTCCTAAGCCTCTGAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR CCA 90 bp GGCAGACACCACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATAGCTCATGGACTTGAGTaGGCCACTGGAGGTCACCCT +
Preference number: 2 (lower is better)
Translates to: GRHHFQPRAHGDVSVLPIAHGLE*ATGGHP
Trigger: AGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGC...TATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGTGGTGTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR TCA 90 bp AAGGCCACCTGCTGGGACAAGCAGCAACTGACCGCCTTGCAGCCACAGAGGCCTTGCAGCCCAGGAAAGTaGTCTTTAAAGACAAGGTGG +
Preference number: 2 (lower is better)
Translates to: KATCWDKQQLTALQPQRPCSPGK*SLKTRW
Trigger: CCACCTTGTCTTTAAAGATCACTTTCCTGGGCTGCA...AGGCCTCTGTGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCCAGCAGGTGGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR TCA 90 bp AATCAGAGAGGTCAACTCTGTGGAATCCCCAGCCCAGGAATTTGGGGCTTTGAATGGCTGGAGGGGTCATaGGTCACCCCATGGGAGGGC +
Preference number: 2 (lower is better)
Translates to: NQRGQLCGIPSPGIWGFEWLEGS*VTPWEG
Trigger: GCCCTCCCATGGGGTGACTCATGACCCCTCCAGCCA...TTCAAAGCCCCAAATTCCTGGGCTGGGGATTCCACAGAGTTGACCTCTCTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
3UTR-3UTR CCA 90 bp ACCCTCAGAGGCTTAGGAAAGGGAAGTGTGACGAGTCAGGGCCCCTGGGCTGGTCTGGAACAACTGGGTTaGAACATTGCAGCCCAGGAA +
Preference number: 2 (lower is better)
Translates to: TLRGLGKGSVTSQGPWAGLEQLG*NIAAQE
Trigger: TTCCTGGGCTGCAATGTTCCAACCCAGTTGTTCCAG...ACCAGCCCAGGGGCCCTGACTCGTCACACTTCCCTTTCCTAAGCCTCTGAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR GCA 90 bp AGCCACAGAGGCCTATGGGGGCCACATGTAGGAGAGTCCTGGCTGGAGGGGTCAAAAAGAATCTCTGACTaGTGGTTATCGGCAGGGGTA +
Preference number: 2 (lower is better)
Translates to: SHRGLWGPHVGESWLEGSKRISD*WLSAGV
Trigger: TACCCCTGCCGATAACCAGCAGTCAGAGATTCTTTT...TGACCCCTCCAGCCAGGACTCTCCTACATGTGGCCCCCATAGGCCTCTGTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR CCA 90 bp GGCAGACACCACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATAGCCCATGGGAATGAATaGCCTCCTATCCCAACTGTA +
Preference number: 2 (lower is better)
Translates to: GRHHFQPRAHGDVSVLPIAHGNE*PPIPTV
Trigger: TACAGTTGGGATAGGAGGCCATTCATTCCCATGGGC...TATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGTGGTGTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR TCA 90 bp ACCCTCAGAGGCTTAGGAAAGGGAAGTGTGACGAGTCAGGGCCCCTGGGCTGGTAATCTTTTGCTTGCCTaGGACATTTTACCCTGGCCT +
Preference number: 2 (lower is better)
Translates to: TLRGLGKGSVTSQGPWAGNLLLA*DILPWP
Trigger: AGGCCAGGGTAAAATGTCTCAGGCAAGCAAAAGATT...ACCAGCCCAGGGGCCCTGACTCGTCACACTTCCCTTTCCTAAGCCTCTGAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR CCA 90 bp TCACTGGGGGATAATGTTAGCTGTGCCCATGGGAATGAATGGCCTCCTATCCCAGCTCATGGACTTGAGTaGGCCACTGGAGGTCACCCT +
Preference number: 2 (lower is better)
Translates to: SLGDNVSCAHGNEWPPIPAHGLE*ATGGHP
Trigger: AGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGC...TGGGATAGGAGGCCATTCATTCCCATGGGCACAGCTAACATTATCCCCCAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR CCA 90 bp GGCAGACACCACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATACTGGTTGTGAACAGCTaGAACAACTGGGTTGGAACA +
Preference number: 2 (lower is better)
Translates to: GRHHFQPRAHGDVSVLPILVVNS*NNWVGT
Trigger: TGTTCCAACCCAGTTGTTCCAGCTGTTCACAACCAG...TATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGTGGTGTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR CCA 90 bp AGCCACAGAGGCCTATGGGGGCCACATGTAGGAGAGTCCTGGCTGGAGGGGTCAACAACTGGTGCAGAATaGGCACCAACTAAGCAAAAT +
Preference number: 2 (lower is better)
Translates to: SHRGLWGPHVGESWLEGSTTGAE*APTKQN
Trigger: ATTTTGCTTAGTTGGTGCCCATTCTGCACCAGTTGT...TGACCCCTCCAGCCAGGACTCTCCTACATGTGGCCCCCATAGGCCTCTGTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR CCA 90 bp ATTCACTTATGCTGTATCAACAACAAGTGCAGCTGGGCGCTGCCTTCCCAGCTGAGCCACAGAGGCCTATaGGGGCCACATGTAGGAGAG +
Preference number: 2 (lower is better)
Translates to: IHLCCINNKCSWALPSQLSHRGL*GPHVGE
Trigger: CTCTCCTACATGTGGCCCCCATAGGCCTCTGTGGCT...CAGCTGGGAAGGCAGCGCCCAGCTGCACTTGTTGTTGATACAGCATAAGTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR GCA 90 bp GGCAGACACCACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATAACTGGAGGTCACCCTTaGTTGCTGCATATTGGATTA +
Preference number: 2 (lower is better)
Translates to: GRHHFQPRAHGDVSVLPITGGHP*LLHIGL
Trigger: TAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGT...TATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGTGGTGTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR CCA 90 bp GCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGATGCTCATGGACTTGAGTaGGCCACTGGAGGTCACCCT +
Preference number: 2 (lower is better)
Translates to: AQSHVLGKLSVPFPVSKDAHGLE*ATGGHP
Trigger: AGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGC...ATCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR CCA 90 bp GGAGAGATCAAGGCCACCTGCTGGGACAAGCAGCAACTGACCGCCTTGCAGCCAGATCTGAGAGATACCTaGGCTTTGAACTGCATGAAA +
Preference number: 2 (lower is better)
Translates to: GEIKATCWDKQQLTALQPDLRDT*ALNCMK
Trigger: TTTCATGCAGTTCAAAGCCCAGGTATCTCTCAGATC...TGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCCAGCAGGTGGCCTTGATCTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR CCA 90 bp GGCAGACACCACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATAAGAATCTCTGACTGCTaGTTATCGGCAGGGGTAAAA +
Preference number: 2 (lower is better)
Translates to: GRHHFQPRAHGDVSVLPIRISDC*LSAGVK
Trigger: TTTTACCCCTGCCGATAACCAGCAGTCAGAGATTCT...TATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGTGGTGTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR CAA 90 bp CTTCCCCTGGTATGCTCAGGAGCCCAGAGAAACAGCAAAGAGGCTTaGCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTG +
Preference number: 2 (lower is better)
Translates to: LPLVCSGAQRNSKEA*HSLMSLESYLSLSL
Trigger: CAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGCAAAGCCTCTTTGCTGTTTCTCTGGGCTCCTGAGCATACCAGGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR GCA 90 bp AATCAGAGAGGTCAACTCTGTGGAATCCCCAGCCCAGGAATTTGGGGCTTTGAATGTATCAACAACAAGTaGAGCTGGGCGCTGCCTTCC +
Preference number: 2 (lower is better)
Translates to: NQRGQLCGIPSPGIWGFECINNK*SWALPS
Trigger: GGAAGGCAGCGCCCAGCTGCACTTGTTGTTGATACA...TTCAAAGCCCCAAATTCCTGGGCTGGGGATTCCACAGAGTTGACCTCTCTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
3UTR-3UTR CCA 90 bp ACCCTCAGAGGCTTAGGAAAGGGAAGTGTGACGAGTCAGGGCCCCTGGGCTGGTTCTTTAAAGACAAGGTaGTCTCTTCAGTGTAATCGA +
Preference number: 2 (lower is better)
Translates to: TLRGLGKGSVTSQGPWAGSLKTR*SLQCNR
Trigger: TCGATTACACTGAAGAGACCACCTTGTCTTTAAAGA...ACCAGCCCAGGGGCCCTGACTCGTCACACTTCCCTTTCCTAAGCCTCTGAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR CCA 90 bp GCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGATGCCCATGGGAATGAATaGCCTCCTATCCCAACTGTA +
Preference number: 2 (lower is better)
Translates to: AQSHVLGKLSVPFPVSKDAHGNE*PPIPTV
Trigger: TACAGTTGGGATAGGAGGCCATTCATTCCCATGGGC...ATCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR CCA 90 bp GGCAGACACCACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATATCTTTAAAGACAAGGTaGTCTCTTCAGTGTAATCGA +
Preference number: 2 (lower is better)
Translates to: GRHHFQPRAHGDVSVLPISLKTR*SLQCNR
Trigger: TCGATTACACTGAAGAGACCACCTTGTCTTTAAAGA...TATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGTGGTGTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR CCA 90 bp TGCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGAAACAGCTGGAACAACTaGGTTGGAACATTGCAGCCC +
Preference number: 2 (lower is better)
Translates to: CTVSCPWKAICPFPCLQGNSWNN*VGTLQP
Trigger: GGGCTGCAATGTTCCAACCCAGTTGTTCCAGCTGTT...TCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR CAA 90 bp AGAGAGGTCAACTCTGTGGAATCCCCAGCCCAGGAATTTGGGGCTTaGAAGCTCTCTTATGTTCAGAAAGGCAAATCATCTCCAGGTCCA +
Preference number: 2 (lower is better)
Translates to: REVNSVESPAQEFGA*KLSYVQKGKSSPGP
Trigger: TGGACCTGGAGATGATTTGCCTTTCTGAACATAAGAGAGCTTCAAAGCCCCAAATTCCTGGGCTGGGGATTCCACAGAGTTGACCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
3UTR-3UTR TCA 90 bp CTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGATATGGTGACAGCCCTTTaGGAGGGTTCAGCCTCAAGG +
Preference number: 2 (lower is better)
Translates to: LRDTWALNCMKERESILDMVTAL*EGSASR
Trigger: CCTTGAGGCTGAACCCTCTCAAAGGGCTGTCACCAT...ATCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
3UTR-3UTR CCA 90 bp TCACTGGGGGATAATGTTAGCTGTGCCCATGGGAATGAATGGCCTCCTATCCCAGATCTGAGAGATACCTaGGCTTTGAACTGCATGAAA +
Preference number: 2 (lower is better)
Translates to: SLGDNVSCAHGNEWPPIPDLRDT*ALNCMK
Trigger: TTTCATGCAGTTCAAAGCCCAGGTATCTCTCAGATC...TGGGATAGGAGGCCATTCATTCCCATGGGCACAGCTAACATTATCCCCCAGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR CCA 90 bp ATTCACTTATGCTGTATCAACAACAAGTGCAGCTGGGCGCTGCCTTCCCAGCTGACAGTCTCATGTCCTTaGAAAGCTATCTGTCCCTTT +
Preference number: 2 (lower is better)
Translates to: IHLCCINNKCSWALPSQLTVSCP*KAICPF
Trigger: AAAGGGACAGATAGCTTTCCAAGGACATGAGACTGT...CAGCTGGGAAGGCAGCGCCCAGCTGCACTTGTTGTTGATACAGCATAAGTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR TCA 90 bp AATCAGAGAGGTCAACTCTGTGGAATCCCCAGCCCAGGAATTTGGGGCTTTGAATCAGGGAAATGCCCATaGTTCACTTATGCTGTATCA +
Preference number: 2 (lower is better)
Translates to: NQRGQLCGIPSPGIWGFESGKCP*FTYAVS
Trigger: TGATACAGCATAAGTGAATCATGGGCATTTCCCTGA...TTCAAAGCCCCAAATTCCTGGGCTGGGGATTCCACAGAGTTGACCTCTCTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
3UTR-3UTR CCA 90 bp AATGAACAAAACAGACCCCAGATCAGAGGAAGAGATGGCTTTCTTGTTAATTCTAGCCACAGAGGCCTATaGGGGCCACATGTAGGAGAG +
Preference number: 2 (lower is better)
Translates to: NEQNRPQIRGRDGFLVNSSHRGL*GPHVGE
Trigger: CTCTCCTACATGTGGCCCCCATAGGCCTCTGTGGCT...AGAATTAACAAGAAAGCCATCTCTTCCTCTGATCTGGGGTCTGTTTTGTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
3UTR-3UTR CCA 90 bp AATCAGAGAGGTCAACTCTGTGGAATCCCCAGCCCAGGAATTTGGGGCTTTGAACAGAATGCTTCTGCTTaGAACAAAGAGGGATTAACC +
Preference number: 2 (lower is better)
Translates to: NQRGQLCGIPSPGIWGFEQNASA*NKEGLT
Trigger: GGTTAATCCCTCTTTGTTCCAAGCAGAAGCATTCTG...TTCAAAGCCCCAAATTCCTGGGCTGGGGATTCCACAGAGTTGACCTCTCTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
3UTR-3UTR TCA 90 bp AATGAACAAAACAGACCCCAGATCAGAGGAAGAGATGGCTTTCTTGTTAATTCTATGGTGACAGCCCTTTaGGAGGGTTCAGCCTCAAGG +
Preference number: 2 (lower is better)
Translates to: NEQNRPQIRGRDGFLVNSMVTAL*EGSASR
Trigger: CCTTGAGGCTGAACCCTCTCAAAGGGCTGTCACCAT...AGAATTAACAAGAAAGCCATCTCTTCCTCTGATCTGGGGTCTGTTTTGTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
3UTR-3UTR CCA 90 bp ATGATTCACTTATGCTGTATCAACAACAAGTGCAGCTGGGCGCTGCCTTCCCAGATCGAAAGTAATCACTaGGGGATAATGTTAGCTGTG +
Preference number: 2 (lower is better)
Translates to: MIHLCCINNKCSWALPSQIESNH*GIMLAV
Trigger: CACAGCTAACATTATCCCCCAGTGATTACTTTCGAT...CTGGGAAGGCAGCGCCCAGCTGCACTTGTTGTTGATACAGCATAAGTGAATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR GCA 90 bp TCTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGAGAGGTCACCCTTGCTTaGTGCATATTGGATTACAGA +
Preference number: 2 (lower is better)
Translates to: SERYLGFELHERERKYPREVTLA*CILDYR
Trigger: TCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTC...TCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
3UTR-3UTR GCA 90 bp AATGAACAAAACAGACCCCAGATCAGAGGAAGAGATGGCTTTCTTGTTAATTCTAGCTCTTCACTGGGATaGCAGAATGCTTCTGCTTGG +
Preference number: 2 (lower is better)
Translates to: NEQNRPQIRGRDGFLVNSSSSLG*QNASAW
Trigger: CCAAGCAGAAGCATTCTGGCATCCCAGTGAAGAGCT...AGAATTAACAAGAAAGCCATCTCTTCCTCTGATCTGGGGTCTGTTTTGTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
3UTR-3UTR CCA 90 bp TCTTCACTGGGATGCCAGAATGCTTCTGCTTGGAACAAAGAGGGATTAACCCTTTCTTTAAAGACAAGGTaGTCTCTTCAGTGTAATCGA +
Preference number: 2 (lower is better)
Translates to: SSLGCQNASAWNKEGLTLSLKTR*SLQCNR
Trigger: TCGATTACACTGAAGAGACCACCTTGTCTTTAAAGA...AAGGGTTAATCCCTCTTTGTTCCAAGCAGAAGCATTCTGGCATCCCAGTGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR GCA 90 bp CTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGATGTCACCCTTGCTTGCTaGATATTGGATTACAGAAAA +
Preference number: 2 (lower is better)
Translates to: LRDTWALNCMKERESILDVTLAC*ILDYRK
Trigger: TTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGAC...ATCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
3UTR-3UTR GCA 90 bp ACTGGGCTGTCTTGTATCCTAATGATAAAACAGCTAACTGATAAAGGAGCTTATGAGGTCACCCTTGCTTaGTGCATATTGGATTACAGA +
Preference number: 2 (lower is better)
Translates to: TGLSCILMIKQLTDKGAYEVTLA*CILDYR
Trigger: TCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTC...ATAAGCTCCTTTATCAGTTAGCTGTTTTATCATTAGGATACAAGACAGCCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
3UTR-3UTR GCA 90 bp ACTGGGCTGTCTTGTATCCTAATGATAAAACAGCTAACTGATAAAGGAGCTTATGTCACCCTTGCTTGCTaGATATTGGATTACAGAAAA +
Preference number: 2 (lower is better)
Translates to: TGLSCILMIKQLTDKGAYVTLAC*ILDYRK
Trigger: TTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGAC...ATAAGCTCCTTTATCAGTTAGCTGTTTTATCATTAGGATACAAGACAGCCCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
3UTR-3UTR CCA 90 bp ATCAGAAGTCTTAGAAATCATGATTCATCTGGTTACAAATCCCATGAGTTTCTCATCGAAAGTAATCACTaGGGGATAATGTTAGCTGTG +
Preference number: 2 (lower is better)
Translates to: IRSLRNHDSSGYKSHEFLIESNH*GIMLAV
Trigger: CACAGCTAACATTATCCCCCAGTGATTACTTTCGAT...GAGAAACTCATGGGATTTGTAACCAGATGAATCATGATTTCTAAGACTTCTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR TCA 72 bp GAGAGATCAAGGCCACCTGCTGGGACAAGCAGCAACTaGCCGCCTTGCAGCCACAGAGGCCTATGGGGGCCA +
Preference number: 3 (lower is better)
Translates to: ERSRPPAGTSSN*PPCSHRGLWGP
Trigger: TGGCCCCCATAGGCCTCTGTGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCCAGCAGGTGGCCTTGATCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR CAA 90 bp AAGGCCACCTGCTGGGACAAGCAGCAACTGACCGCCTTGCAGCCACAGAGGCCTGATGGTGACAGCCCTTaGAGAGGGTTCAGCCTCAAG +
Preference number: 3 (lower is better)
Translates to: KATCWDKQQLTALQPQRPDGDSP*RGFSLK
Trigger: CTTGAGGCTGAACCCTCTCAAAGGGCTGTCACCATC...AGGCCTCTGTGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCCAGCAGGTGGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR CAA 90 bp AGCCACAGAGGCCTATGGGGGCCACATGTAGGAGAGTCCTGGCTGGAGGGGTCAGCTGGAACAACTGGGTaGGAACATTGCAGCCCAGGA +
Preference number: 3 (lower is better)
Translates to: SHRGLWGPHVGESWLEGSAGTTG*EHCSPG
Trigger: TCCTGGGCTGCAATGTTCCAACCCAGTTGTTCCAGC...TGACCCCTCCAGCCAGGACTCTCCTACATGTGGCCCCCATAGGCCTCTGTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR CAA 90 bp GGCAGACACCACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATACAGCAACTGACCGCCTaGCAGCCACAGAGGCCTATG +
Preference number: 3 (lower is better)
Translates to: GRHHFQPRAHGDVSVLPIQQLTA*QPQRPM
Trigger: CATAGGCCTCTGTGGCTGCAAGGCGGTCAGTTGCTG...TATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGTGGTGTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR CAA 90 bp ACCCTCAGAGGCTTAGGAAAGGGAAGTGTGACGAGTCAGGGCCCCTGGGCTGGTGGAGGTCACCCTTGCTaGCTGCATATTGGATTACAG +
Preference number: 3 (lower is better)
Translates to: TLRGLGKGSVTSQGPWAGGGHPC*LHIGLQ
Trigger: CTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCC...ACCAGCCCAGGGGCCCTGACTCGTCACACTTCCCTTTCCTAAGCCTCTGAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR CCA 72 bp AGGAAAGGGAAGTGTGACGAGTCAGGGCCCCTGGGCTaGTGTCTTTTCCAATACTGGGCTAATGCTGGGCCA +
Preference number: 3 (lower is better)
Translates to: RKGKCDESGPLG*CLFQYWANAGP
Trigger: TGGCCCAGCATTAGCCCAGTATTGGAAAAGACACCAGCCCAGGGGCCCTGACTCGTCACACTTCCCTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR CCA 72 bp GAGTCAGGGCCCCTGGGCTGGTGTCTTTTCCAATACTaGGCTAATGCTGGGCCATTCCATTCAGCAGACACT +
Preference number: 3 (lower is better)
Translates to: ESGPLGWCLFQY*ANAGPFHSADT
Trigger: AGTGTCTGCTGAATGGAATGGCCCAGCATTAGCCCAGTATTGGAAAAGACACCAGCCCAGGGGCCCTGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR CCA 72 bp GGCTTAGGAAAGGGAAGTGTGACGAGTCAGGGCCCCTaGGCTGGTGTCTTTTCCAATACTGGGCTAATGCTG +
Preference number: 3 (lower is better)
Translates to: GLGKGSVTSQGP*AGVFSNTGLML
Trigger: CAGCATTAGCCCAGTATTGGAAAAGACACCAGCCCAGGGGCCCTGACTCGTCACACTTCCCTTTCCTAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR CAA 90 bp GGCAGACACCACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATAAGAATCCTAAATCTCTaGGGTCGAGATGTCAGCTGC +
Preference number: 3 (lower is better)
Translates to: GRHHFQPRAHGDVSVLPIRILNL*GRDVSC
Trigger: GCAGCTGACATCTCGACCCAAGAGATTTAGGATTCT...TATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGTGGTGTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR TCA 72 bp GAATGCTTCTGCTTGGAACAAAGAGGGATTAACCCTTaGAGGCAGACACCACTTCCAGCCTCGGGCTCACGG +
Preference number: 3 (lower is better)
Translates to: ECFCLEQRGINP*RQTPLPASGSR
Trigger: CCGTGAGCCCGAGGCTGGAAGTGGTGTCTGCCTTCAAGGGTTAATCCCTCTTTGTTCCAAGCAGAAGCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR CAA 90 bp TGCTGGTTATCGGCAGGGGTAAAACAACTGGTGCAGAATGGGCACCAACTAAGCGCTGGAACAACTGGGTaGGAACATTGCAGCCCAGGA +
Preference number: 3 (lower is better)
Translates to: CWLSAGVKQLVQNGHQLSAGTTG*EHCSPG
Trigger: TCCTGGGCTGCAATGTTCCAACCCAGTTGTTCCAGC...GCTTAGTTGGTGCCCATTCTGCACCAGTTGTTTTACCCCTGCCGATAACCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR CAA 90 bp TGTCTTTTCCAATACTGGGCTAATGCTGGGCCATTCCATTCAGCAGACACTTCCCAGCAACTGACCGCCTaGCAGCCACAGAGGCCTATG +
Preference number: 3 (lower is better)
Translates to: CLFQYWANAGPFHSADTSQQLTA*QPQRPM
Trigger: CATAGGCCTCTGTGGCTGCAAGGCGGTCAGTTGCTG...GGAAGTGTCTGCTGAATGGAATGGCCCAGCATTAGCCCAGTATTGGAAAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR CCA 72 bp TGTGATTCAACACTGAGTGCTCACTTGGAAAGGAGGTaGAGCTCAACTTCCAACTCAGAGGGCCTCTCCCAC +
Preference number: 3 (lower is better)
Translates to: CDSTLSAHLERR*SSTSNSEGLSH
Trigger: GTGGGAGAGGCCCTCTGAGTTGGAAGTTGAGCTCCACCTCCTTTCCAAGTGAGCACTCAGTGTTGAATCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR CAA 90 bp TGCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGAGCTGGAACAACTGGGTaGGAACATTGCAGCCCAGGA +
Preference number: 3 (lower is better)
Translates to: CTVSCPWKAICPFPCLQGAGTTG*EHCSPG
Trigger: TCCTGGGCTGCAATGTTCCAACCCAGTTGTTCCAGC...TCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR TCA 72 bp GAGAGAGAAAGTATCCTAGATAATGGCTCATGGACTTaGGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCA +
Preference number: 3 (lower is better)
Translates to: ERESILDNGSWT*VGHWRSPLLAA
Trigger: TGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGCCATTATCTAGGATACTTTCTCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
3UTR-3UTR CAA 90 bp GCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGATAACTGGGTTGGAACATaGCAGCCCAGGAAAGTGATC +
Preference number: 3 (lower is better)
Translates to: AQSHVLGKLSVPFPVSKDNWVGT*QPRKVI
Trigger: GATCACTTTCCTGGGCTGCAATGTTCCAACCCAGTT...ATCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR CCA 72 bp CTGGGGGATAATGTTAGCTGTGCCCATGGGAATGAATaGCCTCCTATCCCAACTGTACGAGACAAACACCAT +
Preference number: 3 (lower is better)
Translates to: LGDNVSCAHGNE*PPIPTVRDKHH
Trigger: ATGGTGTTTGTCTCGTACAGTTGGGATAGGAGGCCATTCATTCCCATGGGCACAGCTAACATTATCCCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR CAA 90 bp TGTCTTTTCCAATACTGGGCTAATGCTGGGCCATTCCATTCAGCAGACACTTCCGGAGGTCACCCTTGCTaGCTGCATATTGGATTACAG +
Preference number: 3 (lower is better)
Translates to: CLFQYWANAGPFHSADTSGGHPC*LHIGLQ
Trigger: CTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCC...GGAAGTGTCTGCTGAATGGAATGGCCCAGCATTAGCCCAGTATTGGAAAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR CAA 90 bp TCACTGGGGGATAATGTTAGCTGTGCCCATGGGAATGAATGGCCTCCTATCCCAAGAGATACCTGGGCTTaGAACTGCATGAAAGAGAGA +
Preference number: 3 (lower is better)
Translates to: SLGDNVSCAHGNEWPPIPRDTWA*NCMKER
Trigger: TCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCT...TGGGATAGGAGGCCATTCATTCCCATGGGCACAGCTAACATTATCCCCCAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR CAA 90 bp AATCAGAGAGGTCAACTCTGTGGAATCCCCAGCCCAGGAATTTGGGGCTTTGAACAGATTTGCTCACTGTaGATGACACTGGGCTGTCTT +
Preference number: 3 (lower is better)
Translates to: NQRGQLCGIPSPGIWGFEQICSL*MTLGCL
Trigger: AAGACAGCCCAGTGTCATCAACAGTGAGCAAATCTG...TTCAAAGCCCCAAATTCCTGGGCTGGGGATTCCACAGAGTTGACCTCTCTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
3UTR-3UTR CAA 90 bp GCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGATCAGATTTGCTCACTGTaGATGACACTGGGCTGTCTT +
Preference number: 3 (lower is better)
Translates to: AQSHVLGKLSVPFPVSKDQICSL*MTLGCL
Trigger: AAGACAGCCCAGTGTCATCAACAGTGAGCAAATCTG...ATCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR CAA 90 bp GGAACATTGCAGCCCAGGAAAGTGATCTTTAAAGACAAGGTGGTCTCTTCAGTGCACTGGAGGTCACCCTaGCTTGCTGCATATTGGATT +
Preference number: 3 (lower is better)
Translates to: GTLQPRKVIFKDKVVSSVHWRSP*LAAYWI
Trigger: AATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTG...CACTGAAGAGACCACCTTGTCTTTAAAGATCACTTTCCTGGGCTGCAATGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR TCA 72 bp ACTCTGTGGAATCCCCAGCCCAGGAATTTGGGGCTTTaGAGCTCTCTTATGTTCAGAAAGGCAAATCATCTC +
Preference number: 3 (lower is better)
Translates to: TLWNPQPRNLGL*SSLMFRKANHL
Trigger: GAGATGATTTGCCTTTCTGAACATAAGAGAGCTTCAAAGCCCCAAATTCCTGGGCTGGGGATTCCACAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
3UTR-3UTR CAA 90 bp GATGACACTGGGCTGTCTTGTATCCTAATGATAAAACAGCTAACTGATAAAGGAGATGGTGACAGCCCTTaGAGAGGGTTCAGCCTCAAG +
Preference number: 3 (lower is better)
Translates to: DDTGLSCILMIKQLTDKGDGDSP*RGFSLK
Trigger: CTTGAGGCTGAACCCTCTCAAAGGGCTGTCACCATC...TCCTTTATCAGTTAGCTGTTTTATCATTAGGATACAAGACAGCCCAGTGTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
3UTR-3UTR CAA 90 bp TCTTCACTGGGATGCCAGAATGCTTCTGCTTGGAACAAAGAGGGATTAACCCTTAGAGATACCTGGGCTTaGAACTGCATGAAAGAGAGA +
Preference number: 3 (lower is better)
Translates to: SSLGCQNASAWNKEGLTLRDTWA*NCMKER
Trigger: TCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCT...AAGGGTTAATCCCTCTTTGTTCCAAGCAGAAGCATTCTGGCATCCCAGTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR CAA 90 bp GGAACATTGCAGCCCAGGAAAGTGATCTTTAAAGACAAGGTGGTCTCTTCAGTGAACACCATGCCAGATTaGCTCACTGTTGATGACACT +
Preference number: 3 (lower is better)
Translates to: GTLQPRKVIFKDKVVSSVNTMPD*LTVDDT
Trigger: AGTGTCATCAACAGTGAGCAAATCTGGCATGGTGTT...CACTGAAGAGACCACCTTGTCTTTAAAGATCACTTTCCTGGGCTGCAATGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR GCA 72 bp CAGGCAGCAGATCTGAGAGATACCTGGGCTTTGAACTaGATGAAAGAGAGAGAAAGTATCCTAGATAATGGC +
Preference number: 3 (lower is better)
Translates to: QAADLRDTWALN*MKERESILDNG
Trigger: GCCATTATCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAGATCTGCTGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
3UTR CCA 72 bp CAAAATCACACACTGGTTGTGAACAGCTGGAACAACTaGGTTGGAACATTGCAGCCCAGGAAAGTGATCTTT +
Preference number: 3 (lower is better)
Translates to: QNHTLVVNSWNN*VGTLQPRKVIF
Trigger: AAAGATCACTTTCCTGGGCTGCAATGTTCCAACCCAGTTGTTCCAGCTGTTCACAACCAGTGTGTGATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR CCA 72 bp CAAGGTGGTCTCTTCAGTGTAATCGAAAGTAATCACTaGGGGATAATGTTAGCTGTGCCCATGGGAATGAAT +
Preference number: 3 (lower is better)
Translates to: QGGLFSVIESNH*GIMLAVPMGMN
Trigger: ATTCATTCCCATGGGCACAGCTAACATTATCCCCCAGTGATTACTTTCGATTACACTGAAGAGACCACCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR TCA 72 bp TCATCTGGTTACAAATCCCATGAGTTTCTCTTTGAATaGACCTCTTGCTTCCAGTCCCATACAACGCATCTC +
Preference number: 3 (lower is better)
Translates to: SSGYKSHEFLFE*TSCFQSHTTHL
Trigger: GAGATGCGTTGTATGGGACTGGAAGCAAGAGGTTCATTCAAAGAGAAACTCATGGGATTTGTAACCAGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR-3UTR CAA 90 bp ATCAGAAGTCTTAGAAATCATGATTCATCTGGTTACAAATCCCATGAGTTTCTCAGAGATACCTGGGCTTaGAACTGCATGAAAGAGAGA +
Preference number: 3 (lower is better)
Translates to: IRSLRNHDSSGYKSHEFLRDTWA*NCMKER
Trigger: TCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCT...GAGAAACTCATGGGATTTGTAACCAGATGAATCATGATTTCTAAGACTTCTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp AGCCACAGAGGCCTATGGGGGCCACATGTAGGAGAGTCCTGGCTGGAGGGGTCACGCTCCACACCTTCTTaGCCGCTGCTGCCAGCGCCG +
Preference number: 4 (lower is better)
Translates to: SHRGLWGPHVGESWLEGSRSTPS*PLLPAP
Trigger: CGGCGCTGGCAGCAGCGGCCAAGAAGGTGTGGAGCG...TGACCCCTCCAGCCAGGACTCTCCTACATGTGGCCCCCATAGGCCTCTGTGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279027.9
CDS-3UTR CCA 90 bp AAGGCCACCTGCTGGGACAAGCAGCAACTGACCGCCTTGCAGCCACAGAGGCCTGCACTCTCAGGCGGATaGCCAGCTCTGCCAGGACCG +
Preference number: 4 (lower is better)
Translates to: KATCWDKQQLTALQPQRPALSGG*PALPGP
Trigger: CGGTCCTGGCAGAGCTGGCCATCCGCCTGAGAGTGC...AGGCCTCTGTGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCCAGCAGGTGGCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp AGCCACAGAGGCCTATGGGGGCCACATGTAGGAGAGTCCTGGCTGGAGGGGTCAGCACTCTCAGGCGGATaGCCAGCTCTGCCAGGACCG +
Preference number: 4 (lower is better)
Translates to: SHRGLWGPHVGESWLEGSALSGG*PALPGP
Trigger: CGGTCCTGGCAGAGCTGGCCATCCGCCTGAGAGTGC...TGACCCCTCCAGCCAGGACTCTCCTACATGTGGCCCCCATAGGCCTCTGTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp ACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATATGCAGAAGGGCAGCAGCGCCGTCACTaGGAGCGGCAGGGCCTCCGT +
Preference number: 4 (lower is better)
Translates to: TSSLGLTGTSQFYPYAEGQQRRH*ERQGLR
Trigger: ACGGAGGCCCTGCCGCTCTCAGTGACGGCGCTGCTG...CCCTTCTGCATATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp AAGGCCACCTGCTGGGACAAGCAGCAACTGACCGCCTTGCAGCCACAGAGGCCTGTGCACTGGGAGGCTTaGGAGGCTGGTGTAGCAGGG +
Preference number: 4 (lower is better)
Translates to: KATCWDKQQLTALQPQRPVHWEA*EAGVAG
Trigger: CCCTGCTACACCAGCCTCCCAAGCCTCCCAGTGCAC...AGGCCTCTGTGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCCAGCAGGTGGCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp GGAGAGATCAAGGCCACCTGCTGGGACAAGCAGCAACTGACCGCCTTGCAGCCAGCACTCTCAGGCGGATaGCCAGCTCTGCCAGGACCG +
Preference number: 4 (lower is better)
Translates to: GEIKATCWDKQQLTALQPALSGG*PALPGP
Trigger: CGGTCCTGGCAGAGCTGGCCATCCGCCTGAGAGTGC...TGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCCAGCAGGTGGCCTTGATCTCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp GGAGAGATCAAGGCCACCTGCTGGGACAAGCAGCAACTGACCGCCTTGCAGCCACGCTGCCTTCCCAGCTaGCCAAGCGCTCCTAGGGGA +
Preference number: 4 (lower is better)
Translates to: GEIKATCWDKQQLTALQPRCLPS*PSAPRG
Trigger: TCCCCTAGGAGCGCTTGGCCAGCTGGGAAGGCAGCG...TGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCCAGCAGGTGGCCTTGATCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp GCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGACAGCAGCGCCGTCACTaGGAGCGGCAGGGCCTCCGT +
Preference number: 4 (lower is better)
Translates to: AHGLEWATGGHPCLLHIGQQRRH*ERQGLR
Trigger: ACGGAGGCCCTGCCGCTCTCAGTGACGGCGCTGCTG...TCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR TCA 90 bp GGCAGACACCACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATATGGCTGGAGGGGTCATaGGTCACCCCATGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: GRHHFQPRAHGDVSVLPIWLEGS*VTPWEG
Trigger: GCCCTCCCATGGGGTGACTCATGACCCCTCCAGCCA...TATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGTGGTGTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp GCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGAGCAGCGCGAGCGGCGTaGACAGCAGCACCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: AHGLEWATGGHPCLLHIGAARAA*TAAPAA
Trigger: GGCTGCTGGTGCTGCTGTTCACGCCGCTCGCGCTGC...TCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000413164.6
CDS-3UTR GCA 90 bp ACCCTCAGAGGCTTAGGAAAGGGAAGTGTGACGAGTCAGGGCCCCTGGGCTGGTGCGGATGGCCAGCTCTaGCAGGACCGGCAGGAAGAT +
Preference number: 4 (lower is better)
Translates to: TLRGLGKGSVTSQGPWAGADGQL*QDRQED
Trigger: ATCTTCCTGCCGGTCCTGGCAGAGCTGGCCATCCGC...ACCAGCCCAGGGGCCCTGACTCGTCACACTTCCCTTTCCTAAGCCTCTGAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR CAA 72 bp AAGGCCACCTGCTGGGACAAGCAGCAACTGACCGCCTaGCAGCCACAGAGGCCTATGGGGGCCACATGTAGG +
Preference number: 4 (lower is better)
Translates to: KATCWDKQQLTA*QPQRPMGATCR
Trigger: CCTACATGTGGCCCCCATAGGCCTCTGTGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCCAGCAGGTGGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp AGGGGCAGATCTGCCATCTATCTCTCAAGATGTGGCTCCTGTCTTTGGGTCCCACAGCAGCGCCGTCACTaGGAGCGGCAGGGCCTCCGT +
Preference number: 4 (lower is better)
Translates to: RGRSAIYLSRCGSCLWVPQQRRH*ERQGLR
Trigger: ACGGAGGCCCTGCCGCTCTCAGTGACGGCGCTGCTG...TGGGACCCAAAGACAGGAGCCACATCTTGAGAGATAGATGGCAGATCTGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS-3UTR TCA 90 bp GGAGAGATCAAGGCCACCTGCTGGGACAAGCAGCAACTGACCGCCTTGCAGCCATCTTCCTCCAGCCCCTaGAGCTCAGTCCCCCGTACA +
Preference number: 4 (lower is better)
Translates to: GEIKATCWDKQQLTALQPSSSSP*SSVPRT
Trigger: TGTACGGGGGACTGAGCTTCAGGGGCTGGAGGAAGA...TGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCCAGCAGGTGGCCTTGATCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp ACCCTCAGAGGCTTAGGAAAGGGAAGTGTGACGAGTCAGGGCCCCTGGGCTGGTGCCTCTCAGGGAAGGTaGCACCTGAGCAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: TLRGLGKGSVTSQGPWAGASQGR*HLSRDL
Trigger: CAAGTCCCTGCTCAGGTGTCACCTTCCCTGAGAGGC...ACCAGCCCAGGGGCCCTGACTCGTCACACTTCCCTTTCCTAAGCCTCTGAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
CDS-3UTR CCA 90 bp AGCCACAGAGGCCTATGGGGGCCACATGTAGGAGAGTCCTGGCTGGAGGGGTCAATGAGCCTGGCCGGCTaGACTCCAACAAGCATCAGG +
Preference number: 4 (lower is better)
Translates to: SHRGLWGPHVGESWLEGSMSLAG*TPTSIR
Trigger: CCTGATGCTTGTTGGAGTCCAGCCGGCCAGGCTCAT...TGACCCCTCCAGCCAGGACTCTCCTACATGTGGCCCCCATAGGCCTCTGTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp ACCCTCAGAGGCTTAGGAAAGGGAAGTGTGACGAGTCAGGGCCCCTGGGCTGGTAGGGCAAGATGCCCATaGAGGGGAAGAGGACGATGG +
Preference number: 4 (lower is better)
Translates to: TLRGLGKGSVTSQGPWAGRARCP*RGRGRW
Trigger: CCATCGTCCTCTTCCCCTTCATGGGCATCTTGCCCT...ACCAGCCCAGGGGCCCTGACTCGTCACACTTCCCTTTCCTAAGCCTCTGAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp GGAGAGATCAAGGCCACCTGCTGGGACAAGCAGCAACTGACCGCCTTGCAGCCACAAGCATCAGGATCTTaGGGGCGATTCGCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: GEIKATCWDKQQLTALQPQASGS*GRFAGA
Trigger: TGCACCGGCGAATCGCCCTCAAGATCCTGATGCTTG...TGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCCAGCAGGTGGCCTTGATCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp AGCCACAGAGGCCTATGGGGGCCACATGTAGGAGAGTCCTGGCTGGAGGGGTCACTGTGCCCATGGGAATaGATGGCCTCCTATCCCAAC +
Preference number: 4 (lower is better)
Translates to: SHRGLWGPHVGESWLEGSLCPWE*MASYPN
Trigger: GTTGGGATAGGAGGCCATTCATTCCCATGGGCACAG...TGACCCCTCCAGCCAGGACTCTCCTACATGTGGCCCCCATAGGCCTCTGTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp GGAGAGATCAAGGCCACCTGCTGGGACAAGCAGCAACTGACCGCCTTGCAGCCAAGGGCGATTCGCCGGTaGAGGTTCCACTCCTCAATG +
Preference number: 4 (lower is better)
Translates to: GEIKATCWDKQQLTALQPRAIRR*RFHSSM
Trigger: CATTGAGGAGTGGAACCTGCACCGGCGAATCGCCCT...TGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCCAGCAGGTGGCCTTGATCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp GGCAGACACCACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATACCCAGTCCGGGAAGGTaGCCAGCTGGAAGATGGTCT +
Preference number: 4 (lower is better)
Translates to: GRHHFQPRAHGDVSVLPIPSPGR*PAGRWS
Trigger: AGACCATCTTCCAGCTGGGCACCTTCCCGGACTGGG...TATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGTGGTGTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp GCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGATCAGCAGCGCCGTCACTaGGAGCGGCAGGGCCTCCGT +
Preference number: 4 (lower is better)
Translates to: AQSHVLGKLSVPFPVSKDQQRRH*ERQGLR
Trigger: ACGGAGGCCCTGCCGCTCTCAGTGACGGCGCTGCTG...ATCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp GGCAGACACCACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATACCTGTTCGGCAAACTTaGTGGGCCCCAGGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: GRHHFQPRAHGDVSVLPIPVRQT*WAPGSG
Trigger: ACCAGAACCTGGGGCCCATCAAGTTTGCCGAACAGG...TATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGTGGTGTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
CDS-3UTR GCA 90 bp GGCAGACACCACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATAGTGCTGGCGAGAAACTaGATCTCCGTGGGCACAGTG +
Preference number: 4 (lower is better)
Translates to: GRHHFQPRAHGDVSVLPIVLARN*ISVGTV
Trigger: CACTGTGCCCACGGAGATGCAGTTTCTCGCCAGCAC...TATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGTGGTGTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp GGCAGACACCACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATATCCAGGGGGTGCAGCTaGCCACCAATCCATACAGAC +
Preference number: 4 (lower is better)
Translates to: GRHHFQPRAHGDVSVLPISRGCS*PPIHTD
Trigger: GTCTGTATGGATTGGTGGGCAGCTGCACCCCCTGGA...TATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGTGGTGTCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp CAGGGGCAGATCTGCCATCTATCTCTCAAGATGTGGCTCCTGTCTTTGGGTCCCGTGCACTGGGAGGCTTaGGAGGCTGGTGTAGCAGGG +
Preference number: 4 (lower is better)
Translates to: QGQICHLSLKMWLLSLGPVHWEA*EAGVAG
Trigger: CCCTGCTACACCAGCCTCCCAAGCCTCCCAGTGCAC...GGGACCCAAAGACAGGAGCCACATCTTGAGAGATAGATGGCAGATCTGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS-3UTR CCA 90 bp AAGGCCACCTGCTGGGACAAGCAGCAACTGACCGCCTTGCAGCCACAGAGGCCTTGGACAAGAACGAGGTaGTCACCATCATCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: KATCWDKQQLTALQPQRPWTRTR*SPSSPG
Trigger: TCCTGGGGATGATGGTGACCACCTCGTTCTTGTCCA...AGGCCTCTGTGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCCAGCAGGTGGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp AGCCACAGAGGCCTATGGGGGCCACATGTAGGAGAGTCCTGGCTGGAGGGGTCATTCTCTTCACTCTCCTaGCTGGGGTCCTTTCGAACC +
Preference number: 4 (lower is better)
Translates to: SHRGLWGPHVGESWLEGSFSSLS*LGSFRT
Trigger: GGTTCGAAAGGACCCCAGCCAGGAGAGTGAAGAGAA...TGACCCCTCCAGCCAGGACTCTCCTACATGTGGCCCCCATAGGCCTCTGTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp ACCCTCAGAGGCTTAGGAAAGGGAAGTGTGACGAGTCAGGGCCCCTGGGCTGGTGAAACTGCATCTCCGTaGGCACAGTGTGTAGGCCGT +
Preference number: 4 (lower is better)
Translates to: TLRGLGKGSVTSQGPWAGETASP*AQCVGR
Trigger: ACGGCCTACACACTGTGCCCACGGAGATGCAGTTTC...ACCAGCCCAGGGGCCCTGACTCGTCACACTTCCCTTTCCTAAGCCTCTGAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp GGAGAGATCAAGGCCACCTGCTGGGACAAGCAGCAACTGACCGCCTTGCAGCCATCTGTCTCCCCAGGGTaGTCTTTGGCTTCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: GEIKATCWDKQQLTALQPSVSPG*SLASVL
Trigger: CAGCACAGAAGCCAAAGACCACCCTGGGGAGACAGA...TGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCCAGCAGGTGGCCTTGATCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCAGCCTCCACAGCCTTTGGCCATaGCGAAGCCCCCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: CSVLAAGDGDSPLRGFSLHSLWP*RSPLPG
Trigger: TCCTGGGAGGGGGCTTCGCCATGGCCAAAGGCTGTG...GAGGCTGAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp GGCAGACACCACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATAAGCCACAGAGGCCTATaGGGGCCACATGTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: GRHHFQPRAHGDVSVLPISHRGL*GPHVGE
Trigger: CTCTCCTACATGTGGCCCCCATAGGCCTCTGTGGCT...TATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGTGGTGTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp CATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTATGGCTGGAGGGGTCATaGGTCACCCCATGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: HGLEWATGGHPCLLHIGLWLEGS*VTPWEG
Trigger: GCCCTCCCATGGGGTGACTCATGACCCCTCCAGCCA...TAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp TGCTGGTTATCGGCAGGGGTAAAACAACTGGTGCAGAATGGGCACCAACTAAGCTGGCTGGAGGGGTCATaGGTCACCCCATGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: CWLSAGVKQLVQNGHQLSWLEGS*VTPWEG
Trigger: GCCCTCCCATGGGGTGACTCATGACCCCTCCAGCCA...GCTTAGTTGGTGCCCATTCTGCACCAGTTGTTTTACCCCTGCCGATAACCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp AAGGCCACCTGCTGGGACAAGCAGCAACTGACCGCCTTGCAGCCACAGAGGCCTGGTCTTTGGCTTCTGTaGTGGCGAGAAACTGCATCT +
Preference number: 4 (lower is better)
Translates to: KATCWDKQQLTALQPQRPGLWLL*WRETAS
Trigger: AGATGCAGTTTCTCGCCAGCACAGAAGCCAAAGACC...AGGCCTCTGTGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCCAGCAGGTGGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp GCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGACCCAGTCCGGGAAGGTaGCCAGCTGGAAGATGGTCT +
Preference number: 4 (lower is better)
Translates to: AHGLEWATGGHPCLLHIGPSPGR*PAGRWS
Trigger: AGACCATCTTCCAGCTGGGCACCTTCCCGGACTGGG...TCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp ATGGCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTAGGGGAAGAGGACGATaGGCAGCAGCGCCGTCACTG +
Preference number: 4 (lower is better)
Translates to: MAHGLEWATGGHPCLLHIRGRGR*AAAPSL
Trigger: CAGTGACGGCGCTGCTGCCCATCGTCCTCTTCCCCT...AATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp GGAGAGATCAAGGCCACCTGCTGGGACAAGCAGCAACTGACCGCCTTGCAGCCATGGACAAGAACGAGGTaGTCACCATCATCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: GEIKATCWDKQQLTALQPWTRTR*SPSSPG
Trigger: TCCTGGGGATGATGGTGACCACCTCGTTCTTGTCCA...TGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCCAGCAGGTGGCCTTGATCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp ACCCTCAGAGGCTTAGGAAAGGGAAGTGTGACGAGTCAGGGCCCCTGGGCTGGTATTCATCCTCCTTCCTaGAGTCAGCCGGCAGATCCA +
Preference number: 4 (lower is better)
Translates to: TLRGLGKGSVTSQGPWAGIHPPS*SQPADP
Trigger: TGGATCTGCCGGCTGACTCCAGGAAGGAGGATGAAT...ACCAGCCCAGGGGCCCTGACTCGTCACACTTCCCTTTCCTAAGCCTCTGAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp AGCCACAGAGGCCTATGGGGGCCACATGTAGGAGAGTCCTGGCTGGAGGGGTCATTGAGAGAGGGCCTTTaGGACGGGAAGAAGAACAAG +
Preference number: 4 (lower is better)
Translates to: SHRGLWGPHVGESWLEGSLREGL*DGKKNK
Trigger: CTTGTTCTTCTTCCCGTCCCAAAGGCCCTCTCTCAA...TGACCCCTCCAGCCAGGACTCTCCTACATGTGGCCCCCATAGGCCTCTGTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp ATGGCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTCGAAGGCGATGGAGTTaGGGGGCGTTGAGACCGGGA +
Preference number: 4 (lower is better)
Translates to: MAHGLEWATGGHPCLLHIRRRWS*GALRPG
Trigger: TCCCGGTCTCAACGCCCCCCAACTCCATCGCCTTCG...AATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp AAGGCCACCTGCTGGGACAAGCAGCAACTGACCGCCTTGCAGCCACAGAGGCCTTCCGAAATGTGTCATTaGCCAAGGTGGGTGGCAATG +
Preference number: 4 (lower is better)
Translates to: KATCWDKQQLTALQPQRPSEMCH*PRWVAM
Trigger: CATTGCCACCCACCTTGGCCAATGACACATTTCGGA...AGGCCTCTGTGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCCAGCAGGTGGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp GGCAGACACCACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATATCAGGGCCCCTGGGCTaGTGTCTTTTCCAATACTGG +
Preference number: 4 (lower is better)
Translates to: GRHHFQPRAHGDVSVLPISGPLG*CLFQYW
Trigger: CCAGTATTGGAAAAGACACCAGCCCAGGGGCCCTGA...TATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGTGGTGTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TCACTGGGGGATAATGTTAGCTGTGCCCATGGGAATGAATGGCCTCCTATCCCACGCTGCCTTCCCAGCTaGCCAAGCGCTCCTAGGGGA +
Preference number: 4 (lower is better)
Translates to: SLGDNVSCAHGNEWPPIPRCLPS*PSAPRG
Trigger: TCCCCTAGGAGCGCTTGGCCAGCTGGGAAGGCAGCG...TGGGATAGGAGGCCATTCATTCCCATGGGCACAGCTAACATTATCCCCCAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR CAA 72 bp TGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTaGAGAGGGTTCAGCCTCAAGGGAGTCCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: CSVLAAGDGDSP*RGFSLKGVLQG
Trigger: CCCCTGGAGGACTCCCTTGAGGCTGAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR TCA 90 bp TGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCAGCCTCAGGGCAAGATGCCCATaGAGGGGAAGAGGACGATGG +
Preference number: 4 (lower is better)
Translates to: CSVLAAGDGDSPLRGFSLRARCP*RGRGRW
Trigger: CCATCGTCCTCTTCCCCTTCATGGGCATCTTGCCCT...GAGGCTGAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR TCA 90 bp ATGGCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTTCTTCCTCCAGCCCCTaGAGCTCAGTCCCCCGTACA +
Preference number: 4 (lower is better)
Translates to: MAHGLEWATGGHPCLLHISSSSP*SSVPRT
Trigger: TGTACGGGGGACTGAGCTTCAGGGGCTGGAGGAAGA...AATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR GCA 90 bp TGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCAGCCTCTCCAGGGGGTGCAGCTaGCCACCAATCCATACAGAC +
Preference number: 4 (lower is better)
Translates to: CSVLAAGDGDSPLRGFSLSRGCS*PPIHTD
Trigger: GTCTGTATGGATTGGTGGGCAGCTGCACCCCCTGGA...GAGGCTGAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR GCA 90 bp AGCCACAGAGGCCTATGGGGGCCACATGTAGGAGAGTCCTGGCTGGAGGGGTCACTGGAAGATGGTCTGTaGCCAGGTATTCATAGCCAA +
Preference number: 4 (lower is better)
Translates to: SHRGLWGPHVGESWLEGSLEDGL*PGIHSQ
Trigger: TTGGCTATGAATACCTGGGCACAGACCATCTTCCAG...TGACCCCTCCAGCCAGGACTCTCCTACATGTGGCCCCCATAGGCCTCTGTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp ATGGCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTCCCAGTCCGGGAAGGTaGCCAGCTGGAAGATGGTCT +
Preference number: 4 (lower is better)
Translates to: MAHGLEWATGGHPCLLHIPSPGR*PAGRWS
Trigger: AGACCATCTTCCAGCTGGGCACCTTCCCGGACTGGG...AATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR GCA 90 bp GGCAGACACCACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATATGTATCAACAACAAGTaGAGCTGGGCGCTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: GRHHFQPRAHGDVSVLPICINNK*SWALPS
Trigger: GGAAGGCAGCGCCCAGCTGCACTTGTTGTTGATACA...TATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGTGGTGTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TGCTGGTTATCGGCAGGGGTAAAACAACTGGTGCAGAATGGGCACCAACTAAGCAGGGGAAGAGGACGATaGGCAGCAGCGCCGTCACTG +
Preference number: 4 (lower is better)
Translates to: CWLSAGVKQLVQNGHQLSRGRGR*AAAPSL
Trigger: CAGTGACGGCGCTGCTGCCCATCGTCCTCTTCCCCT...GCTTAGTTGGTGCCCATTCTGCACCAGTTGTTTTACCCCTGCCGATAACCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp ACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATATGCAGAAGGGCAATGGGAAGCATCATaGCAGTGGAGGCGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: TSSLGLTGTSQFYPYAEGQWEAS*QWRRCC
Trigger: GCAACACCGCCTCCACTGCCATGATGCTTCCCATTG...CCCTTCTGCATATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp GGAGAGATCAAGGCCACCTGCTGGGACAAGCAGCAACTGACCGCCTTGCAGCCATCCGAAATGTGTCATTaGCCAAGGTGGGTGGCAATG +
Preference number: 4 (lower is better)
Translates to: GEIKATCWDKQQLTALQPSEMCH*PRWVAM
Trigger: CATTGCCACCCACCTTGGCCAATGACACATTTCGGA...TGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCCAGCAGGTGGCCTTGATCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp GCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGAGCTCATGGACTTGAGTaGGCCACTGGAGGTCACCCT +
Preference number: 4 (lower is better)
Translates to: AHGLEWATGGHPCLLHIGAHGLE*ATGGHP
Trigger: AGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGC...TCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp ACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATATGCAGAAGGGTCAGGGCCCCTGGGCTaGTGTCTTTTCCAATACTGG +
Preference number: 4 (lower is better)
Translates to: TSSLGLTGTSQFYPYAEGSGPLG*CLFQYW
Trigger: CCAGTATTGGAAAAGACACCAGCCCAGGGGCCCTGA...CCCTTCTGCATATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp CAGATCTGCCATCTATCTCTCAAGATGTGGCTCCTGTCTTTGGGTCCCAGGTGCAGGGCAAGATGCCCATaGAGGGGAAGAGGACGATGG +
Preference number: 4 (lower is better)
Translates to: QICHLSLKMWLLSLGPRCRARCP*RGRGRW
Trigger: CCATCGTCCTCTTCCCCTTCATGGGCATCTTGCCCT...GCACCTGGGACCCAAAGACAGGAGCCACATCTTGAGAGATAGATGGCAGATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS-3UTR TCA 90 bp ATGGCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTCAAGCATCAGGATCTTaGGGGCGATTCGCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: MAHGLEWATGGHPCLLHIQASGS*GRFAGA
Trigger: TGCACCGGCGAATCGCCCTCAAGATCCTGATGCTTG...AATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR TCA 90 bp CCACAGGGGCAGATCTGCCATCTATCTCTCAAGATGTGGCTCCTGTCTTTGGGTCAAGCATCAGGATCTTaGGGGCGATTCGCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: PQGQICHLSLKMWLLSLGQASGS*GRFAGA
Trigger: TGCACCGGCGAATCGCCCTCAAGATCCTGATGCTTG...ACCCAAAGACAGGAGCCACATCTTGAGAGATAGATGGCAGATCTGCCCCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS-3UTR TCA 90 bp AGCCACAGAGGCCTATGGGGGCCACATGTAGGAGAGTCCTGGCTGGAGGGGTCAACATGCAGAAAAGGATaGAAACAGCCTGTTCGGCAA +
Preference number: 4 (lower is better)
Translates to: SHRGLWGPHVGESWLEGSTCRKG*KQPVRQ
Trigger: TTGCCGAACAGGCTGTTTTCATCCTTTTCTGCATGT...TGACCCCTCCAGCCAGGACTCTCCTACATGTGGCCCCCATAGGCCTCTGTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
CDS-3UTR TCA 90 bp TGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCAGCCTCATGGTGACAGCCCTTTaGGAGGGTTCAGCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: CSVLAAGDGDSPLRGFSLMVTAL*EGSASR
Trigger: CCTTGAGGCTGAACCCTCTCAAAGGGCTGTCACCAT...GAGGCTGAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR TCA 90 bp ACCCTCAGAGGCTTAGGAAAGGGAAGTGTGACGAGTCAGGGCCCCTGGGCTGGTTGCAGCCCAGGAAAGTaGTCTTTAAAGACAAGGTGG +
Preference number: 4 (lower is better)
Translates to: TLRGLGKGSVTSQGPWAGCSPGK*SLKTRW
Trigger: CCACCTTGTCTTTAAAGATCACTTTCCTGGGCTGCA...ACCAGCCCAGGGGCCCTGACTCGTCACACTTCCCTTTCCTAAGCCTCTGAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp CATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTAGGGACAAGCAGCAACTaGCCGCCTTGCAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: HGLEWATGGHPCLLHIGLGTSSN*PPCSHR
Trigger: TCTGTGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCC...TAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp TCACTGGGGGATAATGTTAGCTGTGCCCATGGGAATGAATGGCCTCCTATCCCAGGGACAAGCAGCAACTaGCCGCCTTGCAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: SLGDNVSCAHGNEWPPIPGTSSN*PPCSHR
Trigger: TCTGTGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCC...TGGGATAGGAGGCCATTCATTCCCATGGGCACAGCTAACATTATCCCCCAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp AACAGCTGGAACAACTGGGTTGGAACATTGCAGCCCAGGAAAGTGATCTTTAAAGCAGCGCGAGCGGCGTaGACAGCAGCACCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: NSWNNWVGTLQPRKVIFKAARAA*TAAPAA
Trigger: GGCTGCTGGTGCTGCTGTTCACGCCGCTCGCGCTGC...TTTAAAGATCACTTTCCTGGGCTGCAATGTTCCAACCCAGTTGTTCCAGCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279027.9
CDS-3UTR GCA 90 bp ATGGCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTAGGGCGATTCGCCGGTaGAGGTTCCACTCCTCAATG +
Preference number: 4 (lower is better)
Translates to: MAHGLEWATGGHPCLLHIRAIRR*RFHSSM
Trigger: CATTGAGGAGTGGAACCTGCACCGGCGAATCGCCCT...AATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR GCA 90 bp AGATCTGCCATCTATCTCTCAAGATGTGGCTCCTGTCTTTGGGTCCCAGGTGCCAGGGCGATTCGCCGGTaGAGGTTCCACTCCTCAATG +
Preference number: 4 (lower is better)
Translates to: RSAIYLSRCGSCLWVPGARAIRR*RFHSSM
Trigger: CATTGAGGAGTGGAACCTGCACCGGCGAATCGCCCT...GGCACCTGGGACCCAAAGACAGGAGCCACATCTTGAGAGATAGATGGCAGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS-3UTR GCA 90 bp ATGGCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTTCCAGGGGGTGCAGCTaGCCACCAATCCATACAGAC +
Preference number: 4 (lower is better)
Translates to: MAHGLEWATGGHPCLLHISRGCS*PPIHTD
Trigger: GTCTGTATGGATTGGTGGGCAGCTGCACCCCCTGGA...AATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR GCA 90 bp TGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCAGCCTCACATTCTCCAGGGGGTaGAGCTGCCCACCAATCCAT +
Preference number: 4 (lower is better)
Translates to: CSVLAAGDGDSPLRGFSLTFSRG*SCPPIH
Trigger: ATGGATTGGTGGGCAGCTGCACCCCCTGGAGAATGT...GAGGCTGAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR GCA 90 bp GCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGATGCGGATGGCCAGCTCTaGCAGGACCGGCAGGAAGAT +
Preference number: 4 (lower is better)
Translates to: AQSHVLGKLSVPFPVSKDADGQL*QDRQED
Trigger: ATCTTCCTGCCGGTCCTGGCAGAGCTGGCCATCCGC...ATCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp CTGCCATCTATCTCTCAAGATGTGGCTCCTGTCTTTGGGTCCCAGGTGCCATCAATGAGCCTGGCCGGCTaGACTCCAACAAGCATCAGG +
Preference number: 4 (lower is better)
Translates to: LPSISQDVAPVFGSQVPSMSLAG*TPTSIR
Trigger: CCTGATGCTTGTTGGAGTCCAGCCGGCCAGGCTCAT...TGATGGCACCTGGGACCCAAAGACAGGAGCCACATCTTGAGAGATAGATGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS-3UTR CCA 90 bp AGCCACAGAGGCCTATGGGGGCCACATGTAGGAGAGTCCTGGCTGGAGGGGTCAAGAGACTTTTCAGGATaGCATTGGCAATGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SHRGLWGPHVGESWLEGSRDFSG*HWQWEA
Trigger: TGCTTCCCATTGCCAATGCCATCCTGAAAAGTCTCT...TGACCCCTCCAGCCAGGACTCTCCTACATGTGGCCCCCATAGGCCTCTGTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp GCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGAGAAACTGCATCTCCGTaGGCACAGTGTGTAGGCCGT +
Preference number: 4 (lower is better)
Translates to: AHGLEWATGGHPCLLHIGETASP*AQCVGR
Trigger: ACGGCCTACACACTGTGCCCACGGAGATGCAGTTTC...TCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCAGCCTCTCTGTCTCCCCAGGGTaGTCTTTGGCTTCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: CSVLAAGDGDSPLRGFSLSVSPG*SLASVL
Trigger: CAGCACAGAAGCCAAAGACCACCCTGGGGAGACAGA...GAGGCTGAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp ATTCACTTATGCTGTATCAACAACAAGTGCAGCTGGGCGCTGCCTTCCCAGCTGAGCCGGCAGATCCAGTaGAACCTCTGTCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: IHLCCINNKCSWALPSQLSRQIQ*NLCLPR
Trigger: CCTGGGGAGACAGAGGTTCCACTGGATCTGCCGGCT...CAGCTGGGAAGGCAGCGCCCAGCTGCACTTGTTGTTGATACAGCATAAGTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TCACTGGGGGATAATGTTAGCTGTGCCCATGGGAATGAATGGCCTCCTATCCCAAGCCGGCAGATCCAGTaGAACCTCTGTCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SLGDNVSCAHGNEWPPIPSRQIQ*NLCLPR
Trigger: CCTGGGGAGACAGAGGTTCCACTGGATCTGCCGGCT...TGGGATAGGAGGCCATTCATTCCCATGGGCACAGCTAACATTATCCCCCAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCAGCCTCCTGTGCCCCCAATACTaGCTGAGTAGGGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: CSVLAAGDGDSPLRGFSLLCPQY*LSRGWR
Trigger: TCTCCATCCCCTACTCAGCCAGTATTGGGGGCACAG...GAGGCTGAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp ACCCTCAGAGGCTTAGGAAAGGGAAGTGTGACGAGTCAGGGCCCCTGGGCTGGTATGGGCCCCAGGTTCTaGTATTCTTCCCGAATTACA +
Preference number: 4 (lower is better)
Translates to: TLRGLGKGSVTSQGPWAGMGPRF*YSSRIT
Trigger: TGTAATTCGGGAAGAATACCAGAACCTGGGGCCCAT...ACCAGCCCAGGGGCCCTGACTCGTCACACTTCCCTTTCCTAAGCCTCTGAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TCACTGGGGGATAATGTTAGCTGTGCCCATGGGAATGAATGGCCTCCTATCCCAGGGAAGGTGCCCAGCTaGAAGATGGTCTGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: SLGDNVSCAHGNEWPPIPGKVPS*KMVCAQ
Trigger: CTGGGCACAGACCATCTTCCAGCTGGGCACCTTCCC...TGGGATAGGAGGCCATTCATTCCCATGGGCACAGCTAACATTATCCCCCAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp GGCAGACACCACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATAAACAGCTGGAACAACTaGGTTGGAACATTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GRHHFQPRAHGDVSVLPINSWNN*VGTLQP
Trigger: GGGCTGCAATGTTCCAACCCAGTTGTTCCAGCTGTT...TATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGTGGTGTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp AGCCACAGAGGCCTATGGGGGCCACATGTAGGAGAGTCCTGGCTGGAGGGGTCAAGAATCTCTGACTGCTaGTTATCGGCAGGGGTAAAA +
Preference number: 4 (lower is better)
Translates to: SHRGLWGPHVGESWLEGSRISDC*LSAGVK
Trigger: TTTTACCCCTGCCGATAACCAGCAGTCAGAGATTCT...TGACCCCTCCAGCCAGGACTCTCCTACATGTGGCCCCCATAGGCCTCTGTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp AAGGCCACCTGCTGGGACAAGCAGCAACTGACCGCCTTGCAGCCACAGAGGCCTTGTCTTTTCCAATACTaGGCTAATGCTGGGCCATTC +
Preference number: 4 (lower is better)
Translates to: KATCWDKQQLTALQPQRPCLFQY*ANAGPF
Trigger: GAATGGCCCAGCATTAGCCCAGTATTGGAAAAGACA...AGGCCTCTGTGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCCAGCAGGTGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp TCACTGGGGGATAATGTTAGCTGTGCCCATGGGAATGAATGGCCTCCTATCCCAAGGGCAAGATGCCCATaGAGGGGAAGAGGACGATGG +
Preference number: 4 (lower is better)
Translates to: SLGDNVSCAHGNEWPPIPRARCP*RGRGRW
Trigger: CCATCGTCCTCTTCCCCTTCATGGGCATCTTGCCCT...TGGGATAGGAGGCCATTCATTCCCATGGGCACAGCTAACATTATCCCCCAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp CATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTAAGGGCAAGATGCCCATaGAGGGGAAGAGGACGATGG +
Preference number: 4 (lower is better)
Translates to: HGLEWATGGHPCLLHIGLRARCP*RGRGRW
Trigger: CCATCGTCCTCTTCCCCTTCATGGGCATCTTGCCCT...TAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR TCA 90 bp ATGATTCACTTATGCTGTATCAACAACAAGTGCAGCTGGGCGCTGCCTTCCCAGTCTTCCTCCAGCCCCTaGAGCTCAGTCCCCCGTACA +
Preference number: 4 (lower is better)
Translates to: MIHLCCINNKCSWALPSQSSSSP*SSVPRT
Trigger: TGTACGGGGGACTGAGCTTCAGGGGCTGGAGGAAGA...CTGGGAAGGCAGCGCCCAGCTGCACTTGTTGTTGATACAGCATAAGTGAATCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp AATCAGAGAGGTCAACTCTGTGGAATCCCCAGCCCAGGAATTTGGGGCTTTGAAGGGACAAGCAGCAACTaGCCGCCTTGCAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: NQRGQLCGIPSPGIWGFEGTSSN*PPCSHR
Trigger: TCTGTGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCC...TTCAAAGCCCCAAATTCCTGGGCTGGGGATTCCACAGAGTTGACCTCTCTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
CDS-3UTR TCA 90 bp GGAGAGATCAAGGCCACCTGCTGGGACAAGCAGCAACTGACCGCCTTGCAGCCAAATCTTTTGCTTGCCTaGGACATTTTACCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: GEIKATCWDKQQLTALQPNLLLA*DILPWP
Trigger: AGGCCAGGGTAAAATGTCTCAGGCAAGCAAAAGATT...TGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCCAGCAGGTGGCCTTGATCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp ACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATATGCAGAAGGGAGAGGGATTAACCCTTaGAGGCAGACACCACTTCCA +
Preference number: 4 (lower is better)
Translates to: TSSLGLTGTSQFYPYAEGRGINP*RQTPLP
Trigger: TGGAAGTGGTGTCTGCCTTCAAGGGTTAATCCCTCT...CCCTTCTGCATATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp AGCCACAGAGGCCTATGGGGGCCACATGTAGGAGAGTCCTGGCTGGAGGGGTCATCGAGCCCTATCTTCTaGATTGGTTCTTATCTCAGA +
Preference number: 4 (lower is better)
Translates to: SHRGLWGPHVGESWLEGSSSPIF*IGSYLR
Trigger: TCTGAGATAAGAACCAATGCAGAAGATAGGGCTCGA...TGACCCCTCCAGCCAGGACTCTCCTACATGTGGCCCCCATAGGCCTCTGTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp ATTCACTTATGCTGTATCAACAACAAGTGCAGCTGGGCGCTGCCTTCCCAGCTGATCAGATACAGGGGGTaGACTCTCAGGCGGATGGCC +
Preference number: 4 (lower is better)
Translates to: IHLCCINNKCSWALPSQLIRYRG*TLRRMA
Trigger: GGCCATCCGCCTGAGAGTGCACCCCCTGTATCTGAT...CAGCTGGGAAGGCAGCGCCCAGCTGCACTTGTTGTTGATACAGCATAAGTGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp TTGTTTTGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCCCCAGTCCGGGAAGGTaGCCAGCTGGAAGATGGTCT +
Preference number: 4 (lower is better)
Translates to: LFCSVLAAGDGDSPLRGFPSPGR*PAGRWS
Trigger: AGACCATCTTCCAGCTGGGCACCTTCCCGGACTGGG...GAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACAAAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR GCA 90 bp ACCCTCAGAGGCTTAGGAAAGGGAAGTGTGACGAGTCAGGGCCCCTGGGCTGGTACTGGAGGTCACCCTTaGTTGCTGCATATTGGATTA +
Preference number: 4 (lower is better)
Translates to: TLRGLGKGSVTSQGPWAGTGGHP*LLHIGL
Trigger: TAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGT...ACCAGCCCAGGGGCCCTGACTCGTCACACTTCCCTTTCCTAAGCCTCTGAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp TCACTGGGGGATAATGTTAGCTGTGCCCATGGGAATGAATGGCCTCCTATCCCAAGAGGGAACAGCACATaGGAAGGCCCTGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SLGDNVSCAHGNEWPPIPRGNST*EGPEAE
Trigger: CTCTGCCTCAGGGCCTTCGCATGTGCTGTTCCCTCT...TGGGATAGGAGGCCATTCATTCCCATGGGCACAGCTAACATTATCCCCCAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
CDS-3UTR CCA 90 bp CCAAAGCCACAGGGGCAGATCTGCCATCTATCTCTCAAGATGTGGCTCCTGTCTGTGTCGAGGAAGTACTaGGGGCAGACCTTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: PKPQGQICHLSLKMWLLSVSRKY*GQTLLE
Trigger: CTCCAACAAGGTCTGCCCCCAGTACTTCCTCGACAC...AGACAGGAGCCACATCTTGAGAGATAGATGGCAGATCTGCCCCTGTGGCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS-3UTR CCA 90 bp TCACTGGGGGATAATGTTAGCTGTGCCCATGGGAATGAATGGCCTCCTATCCCAATGAGCCTGGCCGGCTaGACTCCAACAAGCATCAGG +
Preference number: 4 (lower is better)
Translates to: SLGDNVSCAHGNEWPPIPMSLAG*TPTSIR
Trigger: CCTGATGCTTGTTGGAGTCCAGCCGGCCAGGCTCAT...TGGGATAGGAGGCCATTCATTCCCATGGGCACAGCTAACATTATCCCCCAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp ATTCACTTATGCTGTATCAACAACAAGTGCAGCTGGGCGCTGCCTTCCCAGCTGGAAGCATCATGGCAGTaGAGGCGGTGTTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: IHLCCINNKCSWALPSQLEASWQ*RRCCSA
Trigger: GGCTGAGCAACACCGCCTCCACTGCCATGATGCTTC...CAGCTGGGAAGGCAGCGCCCAGCTGCACTTGTTGTTGATACAGCATAAGTGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp AAGCCACAGGGGCAGATCTGCCATCTATCTCTCAAGATGTGGCTCCTGTCTTTGGAAGCATCATGGCAGTaGAGGCGGTGTTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: KPQGQICHLSLKMWLLSLEASWQ*RRCCSA
Trigger: GGCTGAGCAACACCGCCTCCACTGCCATGATGCTTC...CAAAGACAGGAGCCACATCTTGAGAGATAGATGGCAGATCTGCCCCTGTGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS-3UTR CCA 90 bp TGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCAGCCTCGGATGGCATTGGCAATaGGAAGCATCATGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: CSVLAAGDGDSPLRGFSLGWHWQ*EASWQW
Trigger: CCACTGCCATGATGCTTCCCATTGCCAATGCCATCC...GAGGCTGAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp GCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGAATTCATCCTCCTTCCTaGAGTCAGCCGGCAGATCCA +
Preference number: 4 (lower is better)
Translates to: AHGLEWATGGHPCLLHIGIHPPS*SQPADP
Trigger: TGGATCTGCCGGCTGACTCCAGGAAGGAGGATGAAT...TCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp TGTCTTTTCCAATACTGGGCTAATGCTGGGCCATTCCATTCAGCAGACACTTCCCACAGCCTTTGGCCATaGCGAAGCCCCCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: CLFQYWANAGPFHSADTSHSLWP*RSPLPG
Trigger: TCCTGGGAGGGGGCTTCGCCATGGCCAAAGGCTGTG...GGAAGTGTCTGCTGAATGGAATGGCCCAGCATTAGCCCAGTATTGGAAAAGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp GTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATCGAAGGCGATGGAGTTaGGGGGCGTTGAGACCGGGA +
Preference number: 4 (lower is better)
Translates to: VGHWRSPLLAAYWITEKNRRRWS*GALRPG
Trigger: TCCCGGTCTCAACGCCCCCCAACTCCATCGCCTTCG...ATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp TGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCAGCCTCTGCCCAGCTGGAAGATaGTCTGTGCCCAGGTATTCA +
Preference number: 4 (lower is better)
Translates to: CSVLAAGDGDSPLRGFSLCPAGR*SVPRYS
Trigger: TGAATACCTGGGCACAGACCATCTTCCAGCTGGGCA...GAGGCTGAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp TTGTTTTGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCGGGAAGGTGCCCAGCTaGAAGATGGTCTGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LFCSVLAAGDGDSPLRGFGKVPS*KMVCAQ
Trigger: CTGGGCACAGACCATCTTCCAGCTGGGCACCTTCCC...GAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACAAAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp AGCCACAGAGGCCTATGGGGGCCACATGTAGGAGAGTCCTGGCTGGAGGGGTCAGATCTGAGAGATACCTaGGCTTTGAACTGCATGAAA +
Preference number: 4 (lower is better)
Translates to: SHRGLWGPHVGESWLEGSDLRDT*ALNCMK
Trigger: TTTCATGCAGTTCAAAGCCCAGGTATCTCTCAGATC...TGACCCCTCCAGCCAGGACTCTCCTACATGTGGCCCCCATAGGCCTCTGTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp AAGGCCACCTGCTGGGACAAGCAGCAACTGACCGCCTTGCAGCCACAGAGGCCTACAGTCTCATGTCCTTaGAAAGCTATCTGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: KATCWDKQQLTALQPQRPTVSCP*KAICPF
Trigger: AAAGGGACAGATAGCTTTCCAAGGACATGAGACTGT...AGGCCTCTGTGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCCAGCAGGTGGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TGCTGGTTATCGGCAGGGGTAAAACAACTGGTGCAGAATGGGCACCAACTAAGCAGCCACAGAGGCCTATaGGGGCCACATGTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: CWLSAGVKQLVQNGHQLSSHRGL*GPHVGE
Trigger: CTCTCCTACATGTGGCCCCCATAGGCCTCTGTGGCT...GCTTAGTTGGTGCCCATTCTGCACCAGTTGTTTTACCCCTGCCGATAACCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp AATCAGAGAGGTCAACTCTGTGGAATCCCCAGCCCAGGAATTTGGGGCTTTGAACAAGCATCAGGATCTTaGGGGCGATTCGCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: NQRGQLCGIPSPGIWGFEQASGS*GRFAGA
Trigger: TGCACCGGCGAATCGCCCTCAAGATCCTGATGCTTG...TTCAAAGCCCCAAATTCCTGGGCTGGGGATTCCACAGAGTTGACCTCTCTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
CDS-3UTR TCA 90 bp GTTAGCTGTGCCCATGGGAATGAATGGCCTCCTATCCCAACTGTACGAGACAAACCTGTTCGGCAAACTTaGTGGGCCCCAGGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: VSCAHGNEWPPIPTVRDKPVRQT*WAPGSG
Trigger: ACCAGAACCTGGGGCCCATCAAGTTTGCCGAACAGG...TTTGTCTCGTACAGTTGGGATAGGAGGCCATTCATTCCCATGGGCACAGCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
CDS-3UTR TCA 90 bp GGCAGACACCACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATAACATGCAGAAAAGGATaGAAACAGCCTGTTCGGCAA +
Preference number: 4 (lower is better)
Translates to: GRHHFQPRAHGDVSVLPITCRKG*KQPVRQ
Trigger: TTGCCGAACAGGCTGTTTTCATCCTTTTCTGCATGT...TATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGTGGTGTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
CDS-3UTR TCA 90 bp GCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGATACTTCGGGTCCCGGGTaGAGAGGAGGATGGCAAACA +
Preference number: 4 (lower is better)
Translates to: AQSHVLGKLSVPFPVSKDTSGPG*RGGWQT
Trigger: TGTTTGCCATCCTCCTCTTCACCCGGGACCCGAAGT...ATCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
CDS-3UTR TCA 90 bp GCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGATTTGAGACCGGGAGCATaGAGGCAAAGGAGCAGCCGA +
Preference number: 4 (lower is better)
Translates to: AQSHVLGKLSVPFPVSKDLRPGA*RQRSSR
Trigger: TCGGCTGCTCCTTTGCCTTCATGCTCCCGGTCTCAA...ATCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp TGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCAGCCTCAGAGGGATTAACCCTTaGAGGCAGACACCACTTCCA +
Preference number: 4 (lower is better)
Translates to: CSVLAAGDGDSPLRGFSLRGINP*RQTPLP
Trigger: TGGAAGTGGTGTCTGCCTTCAAGGGTTAATCCCTCT...GAGGCTGAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp ATTCACTTATGCTGTATCAACAACAAGTGCAGCTGGGCGCTGCCTTCCCAGCTGTCAGCAGACACTTCCTaGGGGCCTGAGCTCTTCACT +
Preference number: 4 (lower is better)
Translates to: IHLCCINNKCSWALPSQLSADTS*GPELFT
Trigger: AGTGAAGAGCTCAGGCCCTCAGGAAGTGTCTGCTGA...CAGCTGGGAAGGCAGCGCCCAGCTGCACTTGTTGTTGATACAGCATAAGTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp CATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTATCAGCAGACACTTCCTaGGGGCCTGAGCTCTTCACT +
Preference number: 4 (lower is better)
Translates to: HGLEWATGGHPCLLHIGLSADTS*GPELFT
Trigger: AGTGAAGAGCTCAGGCCCTCAGGAAGTGTCTGCTGA...TAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp ACCCTCAGAGGCTTAGGAAAGGGAAGTGTGACGAGTCAGGGCCCCTGGGCTGGTTCAGGGAAATGCCCATaGTTCACTTATGCTGTATCA +
Preference number: 4 (lower is better)
Translates to: TLRGLGKGSVTSQGPWAGSGKCP*FTYAVS
Trigger: TGATACAGCATAAGTGAATCATGGGCATTTCCCTGA...ACCAGCCCAGGGGCCCTGACTCGTCACACTTCCCTTTCCTAAGCCTCTGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp TGTCTTTTCCAATACTGGGCTAATGCTGGGCCATTCCATTCAGCAGACACTTCCGCCTCTCAGGGAAGGTaGCACCTGAGCAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: CLFQYWANAGPFHSADTSASQGR*HLSRDL
Trigger: CAAGTCCCTGCTCAGGTGTCACCTTCCCTGAGAGGC...GGAAGTGTCTGCTGAATGGAATGGCCCAGCATTAGCCCAGTATTGGAAAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
CDS-3UTR TCA 90 bp TGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCAGCCTCCATCAGAAAGAAACTTaGTGGGCCCCAGGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: CSVLAAGDGDSPLRGFSLHQKET*WAPGSG
Trigger: ACCAGAACCTGGGGCCCATCAAGTTTCTTTCTGATG...GAGGCTGAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472148.5
CDS-3UTR GCA 90 bp TGCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGAGTGCTGGCGAGAAACTaGATCTCCGTGGGCACAGTG +
Preference number: 4 (lower is better)
Translates to: CTVSCPWKAICPFPCLQGVLARN*ISVGTV
Trigger: CACTGTGCCCACGGAGATGCAGTTTCTCGCCAGCAC...TCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp GCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGATATCAGATACAGGGGGTaGACTCTCAGGCGGATGGCC +
Preference number: 4 (lower is better)
Translates to: AQSHVLGKLSVPFPVSKDIRYRG*TLRRMA
Trigger: GGCCATCCGCCTGAGAGTGCACCCCCTGTATCTGAT...ATCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp ATGGCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTAGGAGCAGCCGACTGTaGCCGGAATCATCAGATACA +
Preference number: 4 (lower is better)
Translates to: MAHGLEWATGGHPCLLHIRSSRL*PESSDT
Trigger: TGTATCTGATGATTCCGGGCACAGTCGGCTGCTCCT...AATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR GCA 90 bp AAGGCCACCTGCTGGGACAAGCAGCAACTGACCGCCTTGCAGCCACAGAGGCCTGTCACCCTTGCTTGCTaGATATTGGATTACAGAAAA +
Preference number: 4 (lower is better)
Translates to: KATCWDKQQLTALQPQRPVTLAC*ILDYRK
Trigger: TTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGAC...AGGCCTCTGTGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCCAGCAGGTGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp GGCAGACACCACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATAGAGGTCACCCTTGCTTaGTGCATATTGGATTACAGA +
Preference number: 4 (lower is better)
Translates to: GRHHFQPRAHGDVSVLPIEVTLA*CILDYR
Trigger: TCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTC...TATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGTGGTGTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp TGCTGGTTATCGGCAGGGGTAAAACAACTGGTGCAGAATGGGCACCAACTAAGCGAGATCAAGGCCACCTaGTGGGACAAGCAGCAACTG +
Preference number: 4 (lower is better)
Translates to: CWLSAGVKQLVQNGHQLSEIKAT*WDKQQL
Trigger: CAGTTGCTGCTTGTCCCAGCAGGTGGCCTTGATCTC...GCTTAGTTGGTGCCCATTCTGCACCAGTTGTTTTACCCCTGCCGATAACCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TGCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGAATGAGCCTGGCCGGCTaGACTCCAACAAGCATCAGG +
Preference number: 4 (lower is better)
Translates to: CTVSCPWKAICPFPCLQGMSLAG*TPTSIR
Trigger: CCTGATGCTTGTTGGAGTCCAGCCGGCCAGGCTCAT...TCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCAGCCTCTGTTGCTCAGCCACATaGACAAGAACGAGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: CSVLAAGDGDSPLRGFSLCCSAT*TRTRWS
Trigger: TGACCACCTCGTTCTTGTCCATGTGGCTGAGCAACA...GAGGCTGAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp ATTCACTTATGCTGTATCAACAACAAGTGCAGCTGGGCGCTGCCTTCCCAGCTGCAATGGGAAGCATCATaGCAGTGGAGGCGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: IHLCCINNKCSWALPSQLQWEAS*QWRRCC
Trigger: GCAACACCGCCTCCACTGCCATGATGCTTCCCATTG...CAGCTGGGAAGGCAGCGCCCAGCTGCACTTGTTGTTGATACAGCATAAGTGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp GGCAGACACCACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATATTTCGAACCTCCTTCTaGCCAAAGAGACTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: GRHHFQPRAHGDVSVLPIFRTSF*PKRLFR
Trigger: CCTGAAAAGTCTCTTTGGCCAGAAGGAGGTTCGAAA...TATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGTGGTGTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp CCAAAGCCACAGGGGCAGATCTGCCATCTATCTCTCAAGATGTGGCTCCTGTCTTTCTCTTCACTCTCCTaGCTGGGGTCCTTTCGAACC +
Preference number: 4 (lower is better)
Translates to: PKPQGQICHLSLKMWLLSFSSLS*LGSFRT
Trigger: GGTTCGAAAGGACCCCAGCCAGGAGAGTGAAGAGAA...AGACAGGAGCCACATCTTGAGAGATAGATGGCAGATCTGCCCCTGTGGCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS-3UTR CCA 90 bp TGCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGACCCCAGGGTGGTCTTTaGCTTCTGTGCTGGCGAGAA +
Preference number: 4 (lower is better)
Translates to: CTVSCPWKAICPFPCLQGPQGGL*LLCWRE
Trigger: TTCTCGCCAGCACAGAAGCCAAAGACCACCCTGGGG...TCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp ATGGCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTATTCATCCTCCTTCCTaGAGTCAGCCGGCAGATCCA +
Preference number: 4 (lower is better)
Translates to: MAHGLEWATGGHPCLLHIIHPPS*SQPADP
Trigger: TGGATCTGCCGGCTGACTCCAGGAAGGAGGATGAAT...AATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp CATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACTGTGCCCCCAATACTaGCTGAGTAGGGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: HGLEWATGGHPCLLHIGLLCPQY*LSRGWR
Trigger: TCTCCATCCCCTACTCAGCCAGTATTGGGGGCACAG...TAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp GTTAGCTGTGCCCATGGGAATGAATGGCCTCCTATCCCAACTGTACGAGACAAAATTCCTCACAGCCTTTaGCCATGGCGAAGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: VSCAHGNEWPPIPTVRDKIPHSL*PWRSPL
Trigger: GAGGGGGCTTCGCCATGGCCAAAGGCTGTGAGGAAT...TTTGTCTCGTACAGTTGGGATAGGAGGCCATTCATTCCCATGGGCACAGCTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TGCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGAATTCCTCACAGCCTTTaGCCATGGCGAAGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: CTVSCPWKAICPFPCLQGIPHSL*PWRSPL
Trigger: GAGGGGGCTTCGCCATGGCCAAAGGCTGTGAGGAAT...TCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp GTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATGGGAAGGTGCCCAGCTaGAAGATGGTCTGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: VGHWRSPLLAAYWITEKNGKVPS*KMVCAQ
Trigger: CTGGGCACAGACCATCTTCCAGCTGGGCACCTTCCC...ATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp ATGATTCACTTATGCTGTATCAACAACAAGTGCAGCTGGGCGCTGCCTTCCCAGAACAACAAGTGCAGCTaGGCGCTGCCTTCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: MIHLCCINNKCSWALPSQNNKCS*ALPSQL
Trigger: CAGCTGGGAAGGCAGCGCCCAGCTGCACTTGTTGTT...CTGGGAAGGCAGCGCCCAGCTGCACTTGTTGTTGATACAGCATAAGTGAATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp GTTAGCTGTGCCCATGGGAATGAATGGCCTCCTATCCCAACTGTACGAGACAAAAACAACAAGTGCAGCTaGGCGCTGCCTTCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: VSCAHGNEWPPIPTVRDKNNKCS*ALPSQL
Trigger: CAGCTGGGAAGGCAGCGCCCAGCTGCACTTGTTGTT...TTTGTCTCGTACAGTTGGGATAGGAGGCCATTCATTCCCATGGGCACAGCTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TGCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGAAACAACAAGTGCAGCTaGGCGCTGCCTTCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: CTVSCPWKAICPFPCLQGNNKCS*ALPSQL
Trigger: CAGCTGGGAAGGCAGCGCCCAGCTGCACTTGTTGTT...TCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TCTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGACGCTCCACACCTTCTTaGCCGCTGCTGCCAGCGCCG +
Preference number: 4 (lower is better)
Translates to: SERYLGFELHERERKYPRRSTPS*PLLPAP
Trigger: CGGCGCTGGCAGCAGCGGCCAAGAAGGTGTGGAGCG...TCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000413164.6
CDS-3UTR CCA 90 bp AACAGCTGGAACAACTGGGTTGGAACATTGCAGCCCAGGAAAGTGATCTTTAAAAGCAGCGGCCTTCCTTaGGCGGGAGGGCGAAGACCA +
Preference number: 4 (lower is better)
Translates to: NSWNNWVGTLQPRKVIFKSSGLP*AGGRRP
Trigger: TGGTCTTCGCCCTCCCGCCCAAGGAAGGCCGCTGCT...TTTAAAGATCACTTTCCTGGGCTGCAATGTTCCAACCCAGTTGTTCCAGCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279027.9
CDS-3UTR TCA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGCAGCAGCGCCGTCACTaGGAGCGGCAGGGCCTCCGT +
Preference number: 4 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMQQRRH*ERQGLR
Trigger: ACGGAGGCCCTGCCGCTCTCAGTGACGGCGCTGCTG...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR TCA 90 bp GTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATTTGAGACCGGGAGCATaGAGGCAAAGGAGCAGCCGA +
Preference number: 4 (lower is better)
Translates to: VGHWRSPLLAAYWITEKNLRPGA*RQRSSR
Trigger: TCGGCTGCTCCTTTGCCTTCATGCTCCCGGTCTCAA...ATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR TCA 90 bp TGCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGAATGGTGACAGCCCTTTaGGAGGGTTCAGCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: CTVSCPWKAICPFPCLQGMVTAL*EGSASR
Trigger: CCTTGAGGCTGAACCCTCTCAAAGGGCTGTCACCAT...TCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp TTGTTTTGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCATGGTGACAGCCCTTTaGGAGGGTTCAGCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: LFCSVLAAGDGDSPLRGFMVTAL*EGSASR
Trigger: CCTTGAGGCTGAACCCTCTCAAAGGGCTGTCACCAT...GAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACAAAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR TCA 90 bp ACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATATGCAGAAGGGGAGTTTCTCTTTGAATaGACCTCTTGCTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: TSSLGLTGTSQFYPYAEGEFLFE*TSCFQS
Trigger: GGACTGGAAGCAAGAGGTTCATTCAAAGAGAAACTC...CCCTTCTGCATATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp TGTCTTTTCCAATACTGGGCTAATGCTGGGCCATTCCATTCAGCAGACACTTCCAGGGCGATTCGCCGGTaGAGGTTCCACTCCTCAATG +
Preference number: 4 (lower is better)
Translates to: CLFQYWANAGPFHSADTSRAIRR*RFHSSM
Trigger: CATTGAGGAGTGGAACCTGCACCGGCGAATCGCCCT...GGAAGTGTCTGCTGAATGGAATGGCCCAGCATTAGCCCAGTATTGGAAAAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp ATTCACTTATGCTGTATCAACAACAAGTGCAGCTGGGCGCTGCCTTCCCAGCTGGATCCAGAGCCAGCCTaGCAACAGGAACAACAGCAT +
Preference number: 4 (lower is better)
Translates to: IHLCCINNKCSWALPSQLDPEPA*QQEQQH
Trigger: ATGCTGTTGTTCCTGTTGGCAGGCTGGCTCTGGATC...CAGCTGGGAAGGCAGCGCCCAGCTGCACTTGTTGTTGATACAGCATAAGTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp GTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATTCCAGGGGGTGCAGCTaGCCACCAATCCATACAGAC +
Preference number: 4 (lower is better)
Translates to: VGHWRSPLLAAYWITEKNSRGCS*PPIHTD
Trigger: GTCTGTATGGATTGGTGGGCAGCTGCACCCCCTGGA...ATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR GCA 90 bp ATGATTCACTTATGCTGTATCAACAACAAGTGCAGCTGGGCGCTGCCTTCCCAGACATTCTCCAGGGGGTaGAGCTGCCCACCAATCCAT +
Preference number: 4 (lower is better)
Translates to: MIHLCCINNKCSWALPSQTFSRG*SCPPIH
Trigger: ATGGATTGGTGGGCAGCTGCACCCCCTGGAGAATGT...CTGGGAAGGCAGCGCCCAGCTGCACTTGTTGTTGATACAGCATAAGTGAATCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp ATTCACTTATGCTGTATCAACAACAAGTGCAGCTGGGCGCTGCCTTCCCAGCTGAGGAGCAGCCGACTGTaGCCGGAATCATCAGATACA +
Preference number: 4 (lower is better)
Translates to: IHLCCINNKCSWALPSQLRSSRL*PESSDT
Trigger: TGTATCTGATGATTCCGGGCACAGTCGGCTGCTCCT...CAGCTGGGAAGGCAGCGCCCAGCTGCACTTGTTGTTGATACAGCATAAGTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp GCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGACTGGAAGATGGTCTGTaGCCAGGTATTCATAGCCAA +
Preference number: 4 (lower is better)
Translates to: AHGLEWATGGHPCLLHIGLEDGL*PGIHSQ
Trigger: TTGGCTATGAATACCTGGGCACAGACCATCTTCCAG...TCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR GCA 90 bp ATGGCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTCAAGGTGGGTGGCAATaGTGTGACATTGACCGAGTA +
Preference number: 4 (lower is better)
Translates to: MAHGLEWATGGHPCLLHIQGGWQ*CDIDRV
Trigger: TACTCGGTCAATGTCACAGCATTGCCACCCACCTTG...AATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR GCA 90 bp GCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGATGAGATCAAGGCCACCTaGTGGGACAAGCAGCAACTG +
Preference number: 4 (lower is better)
Translates to: AQSHVLGKLSVPFPVSKDEIKAT*WDKQQL
Trigger: CAGTTGCTGCTTGTCCCAGCAGGTGGCCTTGATCTC...ATCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp GTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATAGAGGGAACAGCACATaGGAAGGCCCTGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: VGHWRSPLLAAYWITEKNRGNST*EGPEAE
Trigger: CTCTGCCTCAGGGCCTTCGCATGTGCTGTTCCCTCT...ATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
CDS-3UTR GCA 90 bp AGATCTGCCATCTATCTCTCAAGATGTGGCTCCTGTCTTTGGGTCCCAGGTGCCCCACAGGGGCAGATCTaGCATCTATCTCTCAAGATG +
Preference number: 4 (lower is better)
Translates to: RSAIYLSRCGSCLWVPGAPQGQI*HLSLKM
Trigger: CATCTTGAGAGATAGATGGCAGATCTGCCCCTGTGG...GGCACCTGGGACCCAAAGACAGGAGCCACATCTTGAGAGATAGATGGCAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS-3UTR CCA 90 bp GCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGATGTGTCGAGGAAGTACTaGGGGCAGACCTTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: AQSHVLGKLSVPFPVSKDVSRKY*GQTLLE
Trigger: CTCCAACAAGGTCTGCCCCCAGTACTTCCTCGACAC...ATCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TTGTTTTGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCGTGTCGAGGAAGTACTaGGGGCAGACCTTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: LFCSVLAAGDGDSPLRGFVSRKY*GQTLLE
Trigger: CTCCAACAAGGTCTGCCCCCAGTACTTCCTCGACAC...GAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACAAAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp ATTCACTTATGCTGTATCAACAACAAGTGCAGCTGGGCGCTGCCTTCCCAGCTGTGGACAAGAACGAGGTaGTCACCATCATCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: IHLCCINNKCSWALPSQLWTRTR*SPSSPG
Trigger: TCCTGGGGATGATGGTGACCACCTCGTTCTTGTCCA...CAGCTGGGAAGGCAGCGCCCAGCTGCACTTGTTGTTGATACAGCATAAGTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp AGGGGCAGATCTGCCATCTATCTCTCAAGATGTGGCTCCTGTCTTTGGGTCCCATGTTGCTCAGCCACATaGACAAGAACGAGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: RGRSAIYLSRCGSCLWVPCCSAT*TRTRWS
Trigger: TGACCACCTCGTTCTTGTCCATGTGGCTGAGCAACA...TGGGACCCAAAGACAGGAGCCACATCTTGAGAGATAGATGGCAGATCTGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS-3UTR CCA 90 bp GCCATCTATCTCTCAAGATGTGGCTCCTGTCTTTGGGTCCCAGGTGCCATCATAGGATGGCATTGGCAATaGGAAGCATCATGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: AIYLSRCGSCLWVPGAIIGWHWQ*EASWQW
Trigger: CCACTGCCATGATGCTTCCCATTGCCAATGCCATCC...TATGATGGCACCTGGGACCCAAAGACAGGAGCCACATCTTGAGAGATAGATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS-3UTR CCA 90 bp ACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATATGCAGAAGGGTTTTCAGGATGGCATTaGCAATGGGAAGCATCATGG +
Preference number: 4 (lower is better)
Translates to: TSSLGLTGTSQFYPYAEGFSGWH*QWEASW
Trigger: CCATGATGCTTCCCATTGCCAATGCCATCCTGAAAA...CCCTTCTGCATATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp CATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTATTCTCTTCACTCTCCTaGCTGGGGTCCTTTCGAACC +
Preference number: 4 (lower is better)
Translates to: HGLEWATGGHPCLLHIGLFSSLS*LGSFRT
Trigger: GGTTCGAAAGGACCCCAGCCAGGAGAGTGAAGAGAA...TAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp ATTCACTTATGCTGTATCAACAACAAGTGCAGCTGGGCGCTGCCTTCCCAGCTGATTCATCCTCCTTCCTaGAGTCAGCCGGCAGATCCA +
Preference number: 4 (lower is better)
Translates to: IHLCCINNKCSWALPSQLIHPPS*SQPADP
Trigger: TGGATCTGCCGGCTGACTCCAGGAAGGAGGATGAAT...CAGCTGGGAAGGCAGCGCCCAGCTGCACTTGTTGTTGATACAGCATAAGTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp AATCAGAGAGGTCAACTCTGTGGAATCCCCAGCCCAGGAATTTGGGGCTTTGAACTGTGCCCCCAATACTaGCTGAGTAGGGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: NQRGQLCGIPSPGIWGFELCPQY*LSRGWR
Trigger: TCTCCATCCCCTACTCAGCCAGTATTGGGGGCACAG...TTCAAAGCCCCAAATTCCTGGGCTGGGGATTCCACAGAGTTGACCTCTCTGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
CDS-3UTR CCA 90 bp GCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGAATGGGCCCCAGGTTCTaGTATTCTTCCCGAATTACA +
Preference number: 4 (lower is better)
Translates to: AHGLEWATGGHPCLLHIGMGPRF*YSSRIT
Trigger: TGTAATTCGGGAAGAATACCAGAACCTGGGGCCCAT...TCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp CTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGATGCACTCTCAGGCGGATaGCCAGCTCTGCCAGGACCG +
Preference number: 4 (lower is better)
Translates to: LRDTWALNCMKERESILDALSGG*PALPGP
Trigger: CGGTCCTGGCAGAGCTGGCCATCCGCCTGAGAGTGC...ATCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp ATGGCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTATTGGCCAAGGTGGGTaGCAATGCTGTGACATTGAC +
Preference number: 4 (lower is better)
Translates to: MAHGLEWATGGHPCLLHIIGQGG*QCCDID
Trigger: GTCAATGTCACAGCATTGCCACCCACCTTGGCCAAT...AATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp GGAGAGATCAAGGCCACCTGCTGGGACAAGCAGCAACTGACCGCCTTGCAGCCAATCGAAAGTAATCACTaGGGGATAATGTTAGCTGTG +
Preference number: 4 (lower is better)
Translates to: GEIKATCWDKQQLTALQPIESNH*GIMLAV
Trigger: CACAGCTAACATTATCCCCCAGTGATTACTTTCGAT...TGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCCAGCAGGTGGCCTTGATCTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TCTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGACGCTGCCTTCCCAGCTaGCCAAGCGCTCCTAGGGGA +
Preference number: 4 (lower is better)
Translates to: SERYLGFELHERERKYPRRCLPS*PSAPRG
Trigger: TCCCCTAGGAGCGCTTGGCCAGCTGGGAAGGCAGCG...TCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp GTTAGCTGTGCCCATGGGAATGAATGGCCTCCTATCCCAACTGTACGAGACAAAGGCAGAGTATGTAGCTaGAGAGGGGAGGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: VSCAHGNEWPPIPTVRDKGRVCS*RGEGRA
Trigger: TGCTCTTCCCTCCCCTCTCCAGCTACATACTCTGCC...TTTGTCTCGTACAGTTGGGATAGGAGGCCATTCATTCCCATGGGCACAGCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
CDS-3UTR CCA 90 bp CTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGATAGCAGCGGCCTTCCTTaGGCGGGAGGGCGAAGACCA +
Preference number: 4 (lower is better)
Translates to: LRDTWALNCMKERESILDSSGLP*AGGRRP
Trigger: TGGTCTTCGCCCTCCCGCCCAAGGAAGGCCGCTGCT...ATCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000413164.6
CDS-3UTR TCA 90 bp GCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGAACATGCAGAAAAGGATaGAAACAGCCTGTTCGGCAA +
Preference number: 4 (lower is better)
Translates to: AHGLEWATGGHPCLLHIGTCRKG*KQPVRQ
Trigger: TTGCCGAACAGGCTGTTTTCATCCTTTTCTGCATGT...TCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
CDS-3UTR TCA 90 bp TGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATTTTGAGACCGGGAGCATaGAGGCAAAGGAGCAGCCGA +
Preference number: 4 (lower is better)
Translates to: WATGGHPCLLHIGLQKRILRPGA*RQRSSR
Trigger: TCGGCTGCTCCTTTGCCTTCATGCTCCCGGTCTCAA...AATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR TCA 90 bp GTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATAATGGCTCATGGACTTaGGTGGGCCACTGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: VGHWRSPLLAAYWITEKNNGSWT*VGHWRS
Trigger: TGACCTCCAGTGGCCCACTCAAGTCCATGAGCCATT...ATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR TCA 90 bp CATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTAAGAGGGATTAACCCTTaGAGGCAGACACCACTTCCA +
Preference number: 4 (lower is better)
Translates to: HGLEWATGGHPCLLHIGLRGINP*RQTPLP
Trigger: TGGAAGTGGTGTCTGCCTTCAAGGGTTAATCCCTCT...TAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp CAGATCTGCCATCTATCTCTCAAGATGTGGCTCCTGTCTTTGGGTCCCAGGTGCATCACAAGGGGAGCTTaGAGTTTCAGCCTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: QICHLSLKMWLLSLGPRCITRGA*SFSLSS
Trigger: TGAGGAAAGGCTGAAACTTCAAGCTCCCCTTGTGAT...GCACCTGGGACCCAAAGACAGGAGCCACATCTTGAGAGATAGATGGCAGATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS-3UTR GCA 90 bp TTGTTTTGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCGATCCAGAGCCAGCCTaGCAACAGGAACAACAGCAT +
Preference number: 4 (lower is better)
Translates to: LFCSVLAAGDGDSPLRGFDPEPA*QQEQQH
Trigger: ATGCTGTTGTTCCTGTTGGCAGGCTGGCTCTGGATC...GAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACAAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp TCTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGAGCGGATGGCCAGCTCTaGCAGGACCGGCAGGAAGAT +
Preference number: 4 (lower is better)
Translates to: SERYLGFELHERERKYPRADGQL*QDRQED
Trigger: ATCTTCCTGCCGGTCCTGGCAGAGCTGGCCATCCGC...TCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR GCA 90 bp TCTTCACTGGGATGCCAGAATGCTTCTGCTTGGAACAAAGAGGGATTAACCCTTATCAGATACAGGGGGTaGACTCTCAGGCGGATGGCC +
Preference number: 4 (lower is better)
Translates to: SSLGCQNASAWNKEGLTLIRYRG*TLRRMA
Trigger: GGCCATCCGCCTGAGAGTGCACCCCCTGTATCTGAT...AAGGGTTAATCCCTCTTTGTTCCAAGCAGAAGCATTCTGGCATCCCAGTGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp AATCAGAGAGGTCAACTCTGTGGAATCCCCAGCCCAGGAATTTGGGGCTTTGAAAGGAGCAGCCGACTGTaGCCGGAATCATCAGATACA +
Preference number: 4 (lower is better)
Translates to: NQRGQLCGIPSPGIWGFERSSRL*PESSDT
Trigger: TGTATCTGATGATTCCGGGCACAGTCGGCTGCTCCT...TTCAAAGCCCCAAATTCCTGGGCTGGGGATTCCACAGAGTTGACCTCTCTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
CDS-3UTR GCA 90 bp GTTAGCTGTGCCCATGGGAATGAATGGCCTCCTATCCCAACTGTACGAGACAAAAGGAGCAGCCGACTGTaGCCGGAATCATCAGATACA +
Preference number: 4 (lower is better)
Translates to: VSCAHGNEWPPIPTVRDKRSSRL*PESSDT
Trigger: TGTATCTGATGATTCCGGGCACAGTCGGCTGCTCCT...TTTGTCTCGTACAGTTGGGATAGGAGGCCATTCATTCCCATGGGCACAGCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp GGCAGACACCACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATAGTCACCCTTGCTTGCTaGATATTGGATTACAGAAAA +
Preference number: 4 (lower is better)
Translates to: GRHHFQPRAHGDVSVLPIVTLAC*ILDYRK
Trigger: TTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGAC...TATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGTGGTGTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp TGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCAGCCTCAAAAGAATCTCTGACTaGTGGTTATCGGCAGGGGTA +
Preference number: 4 (lower is better)
Translates to: CSVLAAGDGDSPLRGFSLKRISD*WLSAGV
Trigger: TACCCCTGCCGATAACCAGCAGTCAGAGATTCTTTT...GAGGCTGAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp TTGTTTTGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCTGTATCAACAACAAGTaGAGCTGGGCGCTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: LFCSVLAAGDGDSPLRGFCINNK*SWALPS
Trigger: GGAAGGCAGCGCCCAGCTGCACTTGTTGTTGATACA...GAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACAAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TGCTGGTTATCGGCAGGGGTAAAACAACTGGTGCAGAATGGGCACCAACTAAGCTGTTGCTCAGCCACATaGACAAGAACGAGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: CWLSAGVKQLVQNGHQLSCCSAT*TRTRWS
Trigger: TGACCACCTCGTTCTTGTCCATGTGGCTGAGCAACA...GCTTAGTTGGTGCCCATTCTGCACCAGTTGTTTTACCCCTGCCGATAACCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TTGTTTTGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCGGATGGCATTGGCAATaGGAAGCATCATGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LFCSVLAAGDGDSPLRGFGWHWQ*EASWQW
Trigger: CCACTGCCATGATGCTTCCCATTGCCAATGCCATCC...GAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACAAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp GCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGATGGATGGCATTGGCAATaGGAAGCATCATGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: AQSHVLGKLSVPFPVSKDGWHWQ*EASWQW
Trigger: CCACTGCCATGATGCTTCCCATTGCCAATGCCATCC...ATCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp CAGGGGCAGATCTGCCATCTATCTCTCAAGATGTGGCTCCTGTCTTTGGGTCCCTTTTCAGGATGGCATTaGCAATGGGAAGCATCATGG +
Preference number: 4 (lower is better)
Translates to: QGQICHLSLKMWLLSLGPFSGWH*QWEASW
Trigger: CCATGATGCTTCCCATTGCCAATGCCATCCTGAAAA...GGGACCCAAAGACAGGAGCCACATCTTGAGAGATAGATGGCAGATCTGCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS-3UTR CCA 90 bp TTGTTTTGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCCTTTGGCTTCTGTGCTaGCGAGAAACTGCATCTCCG +
Preference number: 4 (lower is better)
Translates to: LFCSVLAAGDGDSPLRGFLWLLC*RETASP
Trigger: CGGAGATGCAGTTTCTCGCCAGCACAGAAGCCAAAG...GAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACAAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TCTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGACGAAGGCGATGGAGTTaGGGGGCGTTGAGACCGGGA +
Preference number: 4 (lower is better)
Translates to: SERYLGFELHERERKYPRRRRWS*GALRPG
Trigger: TCCCGGTCTCAACGCCCCCCAACTCCATCGCCTTCG...TCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp ATGATTCACTTATGCTGTATCAACAACAAGTGCAGCTGGGCGCTGCCTTCCCAGTGCCCAGCTGGAAGATaGTCTGTGCCCAGGTATTCA +
Preference number: 4 (lower is better)
Translates to: MIHLCCINNKCSWALPSQCPAGR*SVPRYS
Trigger: TGAATACCTGGGCACAGACCATCTTCCAGCTGGGCA...CTGGGAAGGCAGCGCCCAGCTGCACTTGTTGTTGATACAGCATAAGTGAATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp GTTAGCTGTGCCCATGGGAATGAATGGCCTCCTATCCCAACTGTACGAGACAAATGCCCAGCTGGAAGATaGTCTGTGCCCAGGTATTCA +
Preference number: 4 (lower is better)
Translates to: VSCAHGNEWPPIPTVRDKCPAGR*SVPRYS
Trigger: TGAATACCTGGGCACAGACCATCTTCCAGCTGGGCA...TTTGTCTCGTACAGTTGGGATAGGAGGCCATTCATTCCCATGGGCACAGCTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TCACTGGGGGATAATGTTAGCTGTGCCCATGGGAATGAATGGCCTCCTATCCCAATTGGCCAAGGTGGGTaGCAATGCTGTGACATTGAC +
Preference number: 4 (lower is better)
Translates to: SLGDNVSCAHGNEWPPIPIGQGG*QCCDID
Trigger: GTCAATGTCACAGCATTGCCACCCACCTTGGCCAAT...TGGGATAGGAGGCCATTCATTCCCATGGGCACAGCTAACATTATCCCCCAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp ATTCACTTATGCTGTATCAACAACAAGTGCAGCTGGGCGCTGCCTTCCCAGCTGGCCCATGGGAATGAATaGCCTCCTATCCCAACTGTA +
Preference number: 4 (lower is better)
Translates to: IHLCCINNKCSWALPSQLAHGNE*PPIPTV
Trigger: TACAGTTGGGATAGGAGGCCATTCATTCCCATGGGC...CAGCTGGGAAGGCAGCGCCCAGCTGCACTTGTTGTTGATACAGCATAAGTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TGCTGGTTATCGGCAGGGGTAAAACAACTGGTGCAGAATGGGCACCAACTAAGCAACAGCTGGAACAACTaGGTTGGAACATTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: CWLSAGVKQLVQNGHQLSNSWNN*VGTLQP
Trigger: GGGCTGCAATGTTCCAACCCAGTTGTTCCAGCTGTT...GCTTAGTTGGTGCCCATTCTGCACCAGTTGTTTTACCCCTGCCGATAACCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp ACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATATGCAGAAGGGCAGAATGCTTCTGCTTaGAACAAAGAGGGATTAACC +
Preference number: 4 (lower is better)
Translates to: TSSLGLTGTSQFYPYAEGQNASA*NKEGLT
Trigger: GGTTAATCCCTCTTTGTTCCAAGCAGAAGCATTCTG...CCCTTCTGCATATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TGTCTTTTCCAATACTGGGCTAATGCTGGGCCATTCCATTCAGCAGACACTTCCTCAGGGCCCCTGGGCTaGTGTCTTTTCCAATACTGG +
Preference number: 4 (lower is better)
Translates to: CLFQYWANAGPFHSADTSSGPLG*CLFQYW
Trigger: CCAGTATTGGAAAAGACACCAGCCCAGGGGCCCTGA...GGAAGTGTCTGCTGAATGGAATGGCCCAGCATTAGCCCAGTATTGGAAAAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp AATCAGAGAGGTCAACTCTGTGGAATCCCCAGCCCAGGAATTTGGGGCTTTGAAGAGAGGTCAACTCTGTaGAATCCCCAGCCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: NQRGQLCGIPSPGIWGFEERSTL*NPQPRN
Trigger: ATTCCTGGGCTGGGGATTCCACAGAGTTGACCTCTC...TTCAAAGCCCCAAATTCCTGGGCTGGGGATTCCACAGAGTTGACCTCTCTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
CDS-3UTR CCA 90 bp AAAGCCACAGGGGCAGATCTGCCATCTATCTCTCAAGATGTGGCTCCTGTCTTTTGTGGCTCCTGTCTTTaGGTCCCAGGTGCCATCATA +
Preference number: 4 (lower is better)
Translates to: KATGADLPSISQDVAPVFCGSCL*VPGAII
Trigger: TATGATGGCACCTGGGACCCAAAGACAGGAGCCACA...AAAGACAGGAGCCACATCTTGAGAGATAGATGGCAGATCTGCCCCTGTGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS-3UTR TCA 90 bp TGTCTTTTCCAATACTGGGCTAATGCTGGGCCATTCCATTCAGCAGACACTTCCAGTAGGGGATGGAGATaGGGAAGCCCTTCCAGATGT +
Preference number: 4 (lower is better)
Translates to: CLFQYWANAGPFHSADTSSRGWR*GSPSRC
Trigger: ACATCTGGAAGGGCTTCCTCATCTCCATCCCCTACT...GGAAGTGTCTGCTGAATGGAATGGCCCAGCATTAGCCCAGTATTGGAAAAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp TGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATTCTGTGCCCATGGGAATaGATGGCCTCCTATCCCAAC +
Preference number: 4 (lower is better)
Translates to: WATGGHPCLLHIGLQKRILCPWE*MASYPN
Trigger: GTTGGGATAGGAGGCCATTCATTCCCATGGGCACAG...AATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp GCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATCAGGGAAATGCCCATaGTTCACTTATGCTGTATCA +
Preference number: 4 (lower is better)
Translates to: AHGLEWATGGHPCLLHIGSGKCP*FTYAVS
Trigger: TGATACAGCATAAGTGAATCATGGGCATTTCCCTGA...TCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp GTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATGATCCAGAGCCAGCCTaGCAACAGGAACAACAGCAT +
Preference number: 4 (lower is better)
Translates to: VGHWRSPLLAAYWITEKNDPEPA*QQEQQH
Trigger: ATGCTGTTGTTCCTGTTGGCAGGCTGGCTCTGGATC...ATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp AATCAGAGAGGTCAACTCTGTGGAATCCCCAGCCCAGGAATTTGGGGCTTTGAACAAGGTGGGTGGCAATaGTGTGACATTGACCGAGTA +
Preference number: 4 (lower is better)
Translates to: NQRGQLCGIPSPGIWGFEQGGWQ*CDIDRV
Trigger: TACTCGGTCAATGTCACAGCATTGCCACCCACCTTG...TTCAAAGCCCCAAATTCCTGGGCTGGGGATTCCACAGAGTTGACCTCTCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
CDS-3UTR GCA 90 bp TGCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGAAGCTCTTCACTGGGATaGCAGAATGCTTCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: CTVSCPWKAICPFPCLQGSSSLG*QNASAW
Trigger: CCAAGCAGAAGCATTCTGGCATCCCAGTGAAGAGCT...TCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp AGGGGCAGATCTGCCATCTATCTCTCAAGATGTGGCTCCTGTCTTTGGGTCCCATCTTTGGGTCCCAGGTaGCATCATATTCACATTCCA +
Preference number: 4 (lower is better)
Translates to: RGRSAIYLSRCGSCLWVPSLGPR*HHIHIP
Trigger: TGGAATGTGAATATGATGGCACCTGGGACCCAAAGA...TGGGACCCAAAGACAGGAGCCACATCTTGAGAGATAGATGGCAGATCTGCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS-3UTR CCA 90 bp TCTTCACTGGGATGCCAGAATGCTTCTGCTTGGAACAAAGAGGGATTAACCCTTGTGTCGAGGAAGTACTaGGGGCAGACCTTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: SSLGCQNASAWNKEGLTLVSRKY*GQTLLE
Trigger: CTCCAACAAGGTCTGCCCCCAGTACTTCCTCGACAC...AAGGGTTAATCCCTCTTTGTTCCAAGCAGAAGCATTCTGGCATCCCAGTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TGTCTTTTCCAATACTGGGCTAATGCTGGGCCATTCCATTCAGCAGACACTTCCGGATGGCATTGGCAATaGGAAGCATCATGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: CLFQYWANAGPFHSADTSGWHWQ*EASWQW
Trigger: CCACTGCCATGATGCTTCCCATTGCCAATGCCATCC...GGAAGTGTCTGCTGAATGGAATGGCCCAGCATTAGCCCAGTATTGGAAAAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp ATGGCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTAGAGACTTTTCAGGATaGCATTGGCAATGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: MAHGLEWATGGHPCLLHIRDFSG*HWQWEA
Trigger: TGCTTCCCATTGCCAATGCCATCCTGAAAAGTCTCT...AATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp AGGGGCAGATCTGCCATCTATCTCTCAAGATGTGGCTCCTGTCTTTGGGTCCCAAGAGACTTTTCAGGATaGCATTGGCAATGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: RGRSAIYLSRCGSCLWVPRDFSG*HWQWEA
Trigger: TGCTTCCCATTGCCAATGCCATCCTGAAAAGTCTCT...TGGGACCCAAAGACAGGAGCCACATCTTGAGAGATAGATGGCAGATCTGCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS-3UTR CCA 90 bp CCACAGGGGCAGATCTGCCATCTATCTCTCAAGATGTGGCTCCTGTCTTTGGGTTTTCGAACCTCCTTCTaGCCAAAGAGACTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: PQGQICHLSLKMWLLSLGFRTSF*PKRLFR
Trigger: CCTGAAAAGTCTCTTTGGCCAGAAGGAGGTTCGAAA...ACCCAAAGACAGGAGCCACATCTTGAGAGATAGATGGCAGATCTGCCCCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS-3UTR CCA 90 bp TCTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGAAGCCGGCAGATCCAGTaGAACCTCTGTCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SERYLGFELHERERKYPRSRQIQ*NLCLPR
Trigger: CCTGGGGAGACAGAGGTTCCACTGGATCTGCCGGCT...TCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp ACCCTCAGAGGCTTAGGAAAGGGAAGTGTGACGAGTCAGGGCCCCTGGGCTGGTCCCTATCTTCTGCATTaGTTCTTATCTCAGATTTAT +
Preference number: 4 (lower is better)
Translates to: TLRGLGKGSVTSQGPWAGPYLLH*FLSQIY
Trigger: ATAAATCTGAGATAAGAACCAATGCAGAAGATAGGG...ACCAGCCCAGGGGCCCTGACTCGTCACACTTCCCTTTCCTAAGCCTCTGAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp GTTAGCTGTGCCCATGGGAATGAATGGCCTCCTATCCCAACTGTACGAGACAAATTGAGAGAGGGCCTTTaGGACGGGAAGAAGAACAAG +
Preference number: 4 (lower is better)
Translates to: VSCAHGNEWPPIPTVRDKLREGL*DGKKNK
Trigger: CTTGTTCTTCTTCCCGTCCCAAAGGCCCTCTCTCAA...TTTGTCTCGTACAGTTGGGATAGGAGGCCATTCATTCCCATGGGCACAGCTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TCACTGGGGGATAATGTTAGCTGTGCCCATGGGAATGAATGGCCTCCTATCCCACTGGTTGTGAACAGCTaGAACAACTGGGTTGGAACA +
Preference number: 4 (lower is better)
Translates to: SLGDNVSCAHGNEWPPIPLVVNS*NNWVGT
Trigger: TGTTCCAACCCAGTTGTTCCAGCTGTTCACAACCAG...TGGGATAGGAGGCCATTCATTCCCATGGGCACAGCTAACATTATCCCCCAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCAGCCTCACAACTGGTGCAGAATaGGCACCAACTAAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: CSVLAAGDGDSPLRGFSLTTGAE*APTKQN
Trigger: ATTTTGCTTAGTTGGTGCCCATTCTGCACCAGTTGT...GAGGCTGAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TTGTTTTGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCGCTTACCACTTAAGGTaGGGCATGGAGAGATCAAGG +
Preference number: 4 (lower is better)
Translates to: LFCSVLAAGDGDSPLRGFAYHLR*GMERSR
Trigger: CCTTGATCTCTCCATGCCCCACCTTAAGTGGTAAGC...GAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACAAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp GGAACATTGCAGCCCAGGAAAGTGATCTTTAAAGACAAGGTGGTCTCTTCAGTGACGAGTCAGGGCCCCTaGGCTGGTGTCTTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: GTLQPRKVIFKDKVVSSVTSQGP*AGVFSN
Trigger: ATTGGAAAAGACACCAGCCCAGGGGCCCTGACTCGT...CACTGAAGAGACCACCTTGTCTTTAAAGATCACTTTCCTGGGCTGCAATGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATTACGAGTCAGGGCCCCTaGGCTGGTGTCTTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: WATGGHPCLLHIGLQKRITSQGP*AGVFSN
Trigger: ATTGGAAAAGACACCAGCCCAGGGGCCCTGACTCGT...AATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TTGTTTTGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCTCCCACCAGCCCCAGTaGGTTGTAACTGTGATTCAA +
Preference number: 4 (lower is better)
Translates to: LFCSVLAAGDGDSPLRGFSHQPQ*VVTVIQ
Trigger: TTGAATCACAGTTACAACCCACTGGGGCTGGTGGGA...GAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACAAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TGTCTTTTCCAATACTGGGCTAATGCTGGGCCATTCCATTCAGCAGACACTTCCGAGAGGTCAACTCTGTaGAATCCCCAGCCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: CLFQYWANAGPFHSADTSERSTL*NPQPRN
Trigger: ATTCCTGGGCTGGGGATTCCACAGAGTTGACCTCTC...GGAAGTGTCTGCTGAATGGAATGGCCCAGCATTAGCCCAGTATTGGAAAAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
CDS-3UTR CCA 90 bp GGAACATTGCAGCCCAGGAAAGTGATCTTTAAAGACAAGGTGGTCTCTTCAGTGGGCAGAGTATGTAGCTaGAGAGGGGAGGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: GTLQPRKVIFKDKVVSSVGRVCS*RGEGRA
Trigger: TGCTCTTCCCTCCCCTCTCCAGCTACATACTCTGCC...CACTGAAGAGACCACCTTGTCTTTAAAGATCACTTTCCTGGGCTGCAATGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
CDS-3UTR TCA 90 bp TGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATTAGTAGGGGATGGAGATaGGGAAGCCCTTCCAGATGT +
Preference number: 4 (lower is better)
Translates to: WATGGHPCLLHIGLQKRISRGWR*GSPSRC
Trigger: ACATCTGGAAGGGCTTCCTCATCTCCATCCCCTACT...AATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR TCA 90 bp GGAACATTGCAGCCCAGGAAAGTGATCTTTAAAGACAAGGTGGTCTCTTCAGTGAGTAGGGGATGGAGATaGGGAAGCCCTTCCAGATGT +
Preference number: 4 (lower is better)
Translates to: GTLQPRKVIFKDKVVSSVSRGWR*GSPSRC
Trigger: ACATCTGGAAGGGCTTCCTCATCTCCATCCCCTACT...CACTGAAGAGACCACCTTGTCTTTAAAGATCACTTTCCTGGGCTGCAATGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp CTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGATCCTGTTCGGCAAACTTaGTGGGCCCCAGGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: LRDTWALNCMKERESILDPVRQT*WAPGSG
Trigger: ACCAGAACCTGGGGCCCATCAAGTTTGCCGAACAGG...ATCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
CDS-3UTR TCA 90 bp TCTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGAACTTCGGGTCCCGGGTaGAGAGGAGGATGGCAAACA +
Preference number: 4 (lower is better)
Translates to: SERYLGFELHERERKYPRTSGPG*RGGWQT
Trigger: TGTTTGCCATCCTCCTCTTCACCCGGGACCCGAAGT...TCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
CDS-3UTR TCA 90 bp CTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGATACTTCGGGTCCCGGGTaGAGAGGAGGATGGCAAACA +
Preference number: 4 (lower is better)
Translates to: LRDTWALNCMKERESILDTSGPG*RGGWQT
Trigger: TGTTTGCCATCCTCCTCTTCACCCGGGACCCGAAGT...ATCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
CDS-3UTR TCA 90 bp TCTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGATTGAGACCGGGAGCATaGAGGCAAAGGAGCAGCCGA +
Preference number: 4 (lower is better)
Translates to: SERYLGFELHERERKYPRLRPGA*RQRSSR
Trigger: TCGGCTGCTCCTTTGCCTTCATGCTCCCGGTCTCAA...TCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR TCA 90 bp AACAGCTGGAACAACTGGGTTGGAACATTGCAGCCCAGGAAAGTGATCTTTAAAATGGTGACAGCCCTTTaGGAGGGTTCAGCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: NSWNNWVGTLQPRKVIFKMVTAL*EGSASR
Trigger: CCTTGAGGCTGAACCCTCTCAAAGGGCTGTCACCAT...TTTAAAGATCACTTTCCTGGGCTGCAATGTTCCAACCCAGTTGTTCCAGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp CATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTAAATCTTTTGCTTGCCTaGGACATTTTACCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: HGLEWATGGHPCLLHIGLNLLLA*DILPWP
Trigger: AGGCCAGGGTAAAATGTCTCAGGCAAGCAAAAGATT...TAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp GTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATGGTCTTTGGCTTCTGTaGTGGCGAGAAACTGCATCT +
Preference number: 4 (lower is better)
Translates to: VGHWRSPLLAAYWITEKNGLWLL*WRETAS
Trigger: AGATGCAGTTTCTCGCCAGCACAGAAGCCAAAGACC...ATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp TGCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGATTCACCACGTCACACTaGGGAAAGAAACTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: CTVSCPWKAICPFPCLQGFTTSH*GKKLLS
Trigger: GCTCAAGAGTTTCTTTCCGCAGTGTGACGTGGTGAA...TCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp AATCAGAGAGGTCAACTCTGTGGAATCCCCAGCCCAGGAATTTGGGGCTTTGAATTCACCACGTCACACTaGGGAAAGAAACTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: NQRGQLCGIPSPGIWGFEFTTSH*GKKLLS
Trigger: GCTCAAGAGTTTCTTTCCGCAGTGTGACGTGGTGAA...TTCAAAGCCCCAAATTCCTGGGCTGGGGATTCCACAGAGTTGACCTCTCTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
CDS-3UTR GCA 90 bp TGTCTTTTCCAATACTGGGCTAATGCTGGGCCATTCCATTCAGCAGACACTTCCCAAGGTGGGTGGCAATaGTGTGACATTGACCGAGTA +
Preference number: 4 (lower is better)
Translates to: CLFQYWANAGPFHSADTSQGGWQ*CDIDRV
Trigger: TACTCGGTCAATGTCACAGCATTGCCACCCACCTTG...GGAAGTGTCTGCTGAATGGAATGGCCCAGCATTAGCCCAGTATTGGAAAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp GTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATCAAGGTGGGTGGCAATaGTGTGACATTGACCGAGTA +
Preference number: 4 (lower is better)
Translates to: VGHWRSPLLAAYWITEKNQGGWQ*CDIDRV
Trigger: TACTCGGTCAATGTCACAGCATTGCCACCCACCTTG...ATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR GCA 90 bp TCACTGGGGGATAATGTTAGCTGTGCCCATGGGAATGAATGGCCTCCTATCCCAGAGGTCACCCTTGCTTaGTGCATATTGGATTACAGA +
Preference number: 4 (lower is better)
Translates to: SLGDNVSCAHGNEWPPIPEVTLA*CILDYR
Trigger: TCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTC...TGGGATAGGAGGCCATTCATTCCCATGGGCACAGCTAACATTATCCCCCAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp CATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTAGAGGTCACCCTTGCTTaGTGCATATTGGATTACAGA +
Preference number: 4 (lower is better)
Translates to: HGLEWATGGHPCLLHIGLEVTLA*CILDYR
Trigger: TCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTC...TAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR GCA 90 bp ATTCACTTATGCTGTATCAACAACAAGTGCAGCTGGGCGCTGCCTTCCCAGCTGAAAAGAATCTCTGACTaGTGGTTATCGGCAGGGGTA +
Preference number: 4 (lower is better)
Translates to: IHLCCINNKCSWALPSQLKRISD*WLSAGV
Trigger: TACCCCTGCCGATAACCAGCAGTCAGAGATTCTTTT...CAGCTGGGAAGGCAGCGCCCAGCTGCACTTGTTGTTGATACAGCATAAGTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp AACAGCTGGAACAACTGGGTTGGAACATTGCAGCCCAGGAAAGTGATCTTTAAAGAGATCAAGGCCACCTaGTGGGACAAGCAGCAACTG +
Preference number: 4 (lower is better)
Translates to: NSWNNWVGTLQPRKVIFKEIKAT*WDKQQL
Trigger: CAGTTGCTGCTTGTCCCAGCAGGTGGCCTTGATCTC...TTTAAAGATCACTTTCCTGGGCTGCAATGTTCCAACCCAGTTGTTCCAGCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp GTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATAGCTCTTCACTGGGATaGCAGAATGCTTCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: VGHWRSPLLAAYWITEKNSSSLG*QNASAW
Trigger: CCAAGCAGAAGCATTCTGGCATCCCAGTGAAGAGCT...ATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp CTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGATATGAGCCTGGCCGGCTaGACTCCAACAAGCATCAGG +
Preference number: 4 (lower is better)
Translates to: LRDTWALNCMKERESILDMSLAG*TPTSIR
Trigger: CCTGATGCTTGTTGGAGTCCAGCCGGCCAGGCTCAT...ATCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp GTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATTGTTGCTCAGCCACATaGACAAGAACGAGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: VGHWRSPLLAAYWITEKNCCSAT*TRTRWS
Trigger: TGACCACCTCGTTCTTGTCCATGTGGCTGAGCAACA...ATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp TCTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGAGAAGCATCATGGCAGTaGAGGCGGTGTTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SERYLGFELHERERKYPREASWQ*RRCCSA
Trigger: GGCTGAGCAACACCGCCTCCACTGCCATGATGCTTC...TCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp CATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTATTTCGAACCTCCTTCTaGCCAAAGAGACTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: HGLEWATGGHPCLLHIGLFRTSF*PKRLFR
Trigger: CCTGAAAAGTCTCTTTGGCCAGAAGGAGGTTCGAAA...TAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp AACAGCTGGAACAACTGGGTTGGAACATTGCAGCCCAGGAAAGTGATCTTTAAAGAAACTGCATCTCCGTaGGCACAGTGTGTAGGCCGT +
Preference number: 4 (lower is better)
Translates to: NSWNNWVGTLQPRKVIFKETASP*AQCVGR
Trigger: ACGGCCTACACACTGTGCCCACGGAGATGCAGTTTC...TTTAAAGATCACTTTCCTGGGCTGCAATGTTCCAACCCAGTTGTTCCAGCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp GTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATTTGAGAGAGGGCCTTTaGGACGGGAAGAAGAACAAG +
Preference number: 4 (lower is better)
Translates to: VGHWRSPLLAAYWITEKNLREGL*DGKKNK
Trigger: CTTGTTCTTCTTCCCGTCCCAAAGGCCCTCTCTCAA...ATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp AATGAACAAAACAGACCCCAGATCAGAGGAAGAGATGGCTTTCTTGTTAATTCTCACAGCCTTTGGCCATaGCGAAGCCCCCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: NEQNRPQIRGRDGFLVNSHSLWP*RSPLPG
Trigger: TCCTGGGAGGGGGCTTCGCCATGGCCAAAGGCTGTG...AGAATTAACAAGAAAGCCATCTCTTCCTCTGATCTGGGGTCTGTTTTGTTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
CDS-3UTR CCA 90 bp CTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGATGCTCATGGACTTGAGTaGGCCACTGGAGGTCACCCT +
Preference number: 4 (lower is better)
Translates to: LRDTWALNCMKERESILDAHGLE*ATGGHP
Trigger: AGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGC...ATCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp GTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATGCCCATGGGAATGAATaGCCTCCTATCCCAACTGTA +
Preference number: 4 (lower is better)
Translates to: VGHWRSPLLAAYWITEKNAHGNE*PPIPTV
Trigger: TACAGTTGGGATAGGAGGCCATTCATTCCCATGGGC...ATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp ATGATTCACTTATGCTGTATCAACAACAAGTGCAGCTGGGCGCTGCCTTCCCAGCTGGTTGTGAACAGCTaGAACAACTGGGTTGGAACA +
Preference number: 4 (lower is better)
Translates to: MIHLCCINNKCSWALPSQLVVNS*NNWVGT
Trigger: TGTTCCAACCCAGTTGTTCCAGCTGTTCACAACCAG...CTGGGAAGGCAGCGCCCAGCTGCACTTGTTGTTGATACAGCATAAGTGAATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp CTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGATAGCCACAGAGGCCTATaGGGGCCACATGTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: LRDTWALNCMKERESILDSHRGL*GPHVGE
Trigger: CTCTCCTACATGTGGCCCCCATAGGCCTCTGTGGCT...ATCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp GTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATGCTTACCACTTAAGGTaGGGCATGGAGAGATCAAGG +
Preference number: 4 (lower is better)
Translates to: VGHWRSPLLAAYWITEKNAYHLR*GMERSR
Trigger: CCTTGATCTCTCCATGCCCCACCTTAAGTGGTAAGC...ATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp GCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGATCACTTGGAAAGGAGGTaGAGCTCAACTTCCAACTCA +
Preference number: 4 (lower is better)
Translates to: AQSHVLGKLSVPFPVSKDHLERR*SSTSNS
Trigger: TGAGTTGGAAGTTGAGCTCCACCTCCTTTCCAAGTG...ATCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp GTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATTCCCACCAGCCCCAGTaGGTTGTAACTGTGATTCAA +
Preference number: 4 (lower is better)
Translates to: VGHWRSPLLAAYWITEKNSHQPQ*VVTVIQ
Trigger: TTGAATCACAGTTACAACCCACTGGGGCTGGTGGGA...ATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
3UTR CAA 72 bp AGAAACAGCAAAGAGGCTTTGCACAGTCTCATGTCCTaGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: RNSKEALHSLMS*ESYLSLSLSPR
Trigger: CCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGCAAAGCCTCTTTGCTGTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGTCTTCCTCCAGCCCCTaGAGCTCAGTCCCCCGTACA +
Preference number: 4 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMSSSSP*SSVPRT
Trigger: TGTACGGGGGACTGAGCTTCAGGGGCTGGAGGAAGA...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR TCA 90 bp CTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGATAATGGCTCATGGACTTaGGTGGGCCACTGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: LRDTWALNCMKERESILDNGSWT*VGHWRS
Trigger: TGACCTCCAGTGGCCCACTCAAGTCCATGAGCCATT...ATCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR TCA 90 bp TGCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGAAATCTTTTGCTTGCCTaGGACATTTTACCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: CTVSCPWKAICPFPCLQGNLLLA*DILPWP
Trigger: AGGCCAGGGTAAAATGTCTCAGGCAAGCAAAAGATT...TCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp GTTAGCTGTGCCCATGGGAATGAATGGCCTCCTATCCCAACTGTACGAGACAAAGAGTTTCTCTTTGAATaGACCTCTTGCTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: VSCAHGNEWPPIPTVRDKEFLFE*TSCFQS
Trigger: GGACTGGAAGCAAGAGGTTCATTCAAAGAGAAACTC...TTTGTCTCGTACAGTTGGGATAGGAGGCCATTCATTCCCATGGGCACAGCTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp TTGTTTTGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCGAGTTTCTCTTTGAATaGACCTCTTGCTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: LFCSVLAAGDGDSPLRGFEFLFE*TSCFQS
Trigger: GGACTGGAAGCAAGAGGTTCATTCAAAGAGAAACTC...GAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACAAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp ATGGCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGTCACCCTTGCTTGCTaGATATTGGATTACAGAAAA +
Preference number: 4 (lower is better)
Translates to: MAHGLEWATGGHPCLLHIVTLAC*ILDYRK
Trigger: TTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGAC...AATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR GCA 90 bp ATGATTCACTTATGCTGTATCAACAACAAGTGCAGCTGGGCGCTGCCTTCCCAGACTGGGATGCCAGAATaGTTCTGCTTGGAACAAAGA +
Preference number: 4 (lower is better)
Translates to: MIHLCCINNKCSWALPSQTGMPE*FCLEQR
Trigger: TCTTTGTTCCAAGCAGAAGCATTCTGGCATCCCAGT...CTGGGAAGGCAGCGCCCAGCTGCACTTGTTGTTGATACAGCATAAGTGAATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp GCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGATACTGGGATGCCAGAATaGTTCTGCTTGGAACAAAGA +
Preference number: 4 (lower is better)
Translates to: AQSHVLGKLSVPFPVSKDTGMPE*FCLEQR
Trigger: TCTTTGTTCCAAGCAGAAGCATTCTGGCATCCCAGT...ATCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TCTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGAGTGTCGAGGAAGTACTaGGGGCAGACCTTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: SERYLGFELHERERKYPRVSRKY*GQTLLE
Trigger: CTCCAACAAGGTCTGCCCCCAGTACTTCCTCGACAC...TCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp TCTTCACTGGGATGCCAGAATGCTTCTGCTTGGAACAAAGAGGGATTAACCCTTTGTTGCTCAGCCACATaGACAAGAACGAGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: SSLGCQNASAWNKEGLTLCCSAT*TRTRWS
Trigger: TGACCACCTCGTTCTTGTCCATGTGGCTGAGCAACA...AAGGGTTAATCCCTCTTTGTTCCAAGCAGAAGCATTCTGGCATCCCAGTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TCTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGACAATGGGAAGCATCATaGCAGTGGAGGCGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: SERYLGFELHERERKYPRQWEAS*QWRRCC
Trigger: GCAACACCGCCTCCACTGCCATGATGCTTCCCATTG...TCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp TTGTTTTGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCAGAGACTTTTCAGGATaGCATTGGCAATGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: LFCSVLAAGDGDSPLRGFRDFSG*HWQWEA
Trigger: TGCTTCCCATTGCCAATGCCATCCTGAAAAGTCTCT...GAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACAAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp ATGATTCACTTATGCTGTATCAACAACAAGTGCAGCTGGGCGCTGCCTTCCCAGTTTCGAACCTCCTTCTaGCCAAAGAGACTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: MIHLCCINNKCSWALPSQFRTSF*PKRLFR
Trigger: CCTGAAAAGTCTCTTTGGCCAGAAGGAGGTTCGAAA...CTGGGAAGGCAGCGCCCAGCTGCACTTGTTGTTGATACAGCATAAGTGAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TTGTTTTGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCTTTCGAACCTCCTTCTaGCCAAAGAGACTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: LFCSVLAAGDGDSPLRGFFRTSF*PKRLFR
Trigger: CCTGAAAAGTCTCTTTGGCCAGAAGGAGGTTCGAAA...GAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACAAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGAGCCGGCAGATCCAGTaGAACCTCTGTCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMSRQIQ*NLCLPR
Trigger: CCTGGGGAGACAGAGGTTCCACTGGATCTGCCGGCT...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR CCA 90 bp TGTCTTTTCCAATACTGGGCTAATGCTGGGCCATTCCATTCAGCAGACACTTCCATGGGCCCCAGGTTCTaGTATTCTTCCCGAATTACA +
Preference number: 4 (lower is better)
Translates to: CLFQYWANAGPFHSADTSMGPRF*YSSRIT
Trigger: TGTAATTCGGGAAGAATACCAGAACCTGGGGCCCAT...GGAAGTGTCTGCTGAATGGAATGGCCCAGCATTAGCCCAGTATTGGAAAAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp GATGACACTGGGCTGTCTTGTATCCTAATGATAAAACAGCTAACTGATAAAGGAGGGAAGGTGCCCAGCTaGAAGATGGTCTGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: DDTGLSCILMIKQLTDKGGKVPS*KMVCAQ
Trigger: CTGGGCACAGACCATCTTCCAGCTGGGCACCTTCCC...TCCTTTATCAGTTAGCTGTTTTATCATTAGGATACAAGACAGCCCAGTGTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp TCTTCACTGGGATGCCAGAATGCTTCTGCTTGGAACAAAGAGGGATTAACCCTTGCCCATGGGAATGAATaGCCTCCTATCCCAACTGTA +
Preference number: 4 (lower is better)
Translates to: SSLGCQNASAWNKEGLTLAHGNE*PPIPTV
Trigger: TACAGTTGGGATAGGAGGCCATTCATTCCCATGGGC...AAGGGTTAATCCCTCTTTGTTCCAAGCAGAAGCATTCTGGCATCCCAGTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TCTTCACTGGGATGCCAGAATGCTTCTGCTTGGAACAAAGAGGGATTAACCCTTCTGGAACAACTGGGTTaGAACATTGCAGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: SSLGCQNASAWNKEGLTLLEQLG*NIAAQE
Trigger: TTCCTGGGCTGCAATGTTCCAACCCAGTTGTTCCAG...AAGGGTTAATCCCTCTTTGTTCCAAGCAGAAGCATTCTGGCATCCCAGTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TCTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGAACGAGTCAGGGCCCCTaGGCTGGTGTCTTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: SERYLGFELHERERKYPRTSQGP*AGVFSN
Trigger: ATTGGAAAAGACACCAGCCCAGGGGCCCTGACTCGT...TCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TCTTCACTGGGATGCCAGAATGCTTCTGCTTGGAACAAAGAGGGATTAACCCTTTCCCACCAGCCCCAGTaGGTTGTAACTGTGATTCAA +
Preference number: 4 (lower is better)
Translates to: SSLGCQNASAWNKEGLTLSHQPQ*VVTVIQ
Trigger: TTGAATCACAGTTACAACCCACTGGGGCTGGTGGGA...AAGGGTTAATCCCTCTTTGTTCCAAGCAGAAGCATTCTGGCATCCCAGTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGAGGGCAAGATGCCCATaGAGGGGAAGAGGACGATGG +
Preference number: 4 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMRARCP*RGRGRW
Trigger: CCATCGTCCTCTTCCCCTTCATGGGCATCTTGCCCT...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR TCA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGCAAGCATCAGGATCTTaGGGGCGATTCGCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMQASGS*GRFAGA
Trigger: TGCACCGGCGAATCGCCCTCAAGATCCTGATGCTTG...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR TCA 90 bp ACTGGGCTGTCTTGTATCCTAATGATAAAACAGCTAACTGATAAAGGAGCTTATTCTTCCTCCAGCCCCTaGAGCTCAGTCCCCCGTACA +
Preference number: 4 (lower is better)
Translates to: TGLSCILMIKQLTDKGAYSSSSP*SSVPRT
Trigger: TGTACGGGGGACTGAGCTTCAGGGGCTGGAGGAAGA...ATAAGCTCCTTTATCAGTTAGCTGTTTTATCATTAGGATACAAGACAGCCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR TCA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGCCTGTTCGGCAAACTTaGTGGGCCCCAGGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMPVRQT*WAPGSG
Trigger: ACCAGAACCTGGGGCCCATCAAGTTTGCCGAACAGG...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR TCA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGACTTCGGGTCCCGGGTaGAGAGGAGGATGGCAAACA +
Preference number: 4 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMTSGPG*RGGWQT
Trigger: TGTTTGCCATCCTCCTCTTCACCCGGGACCCGAAGT...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR GCA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGAGGGCGATTCGCCGGTaGAGGTTCCACTCCTCAATG +
Preference number: 4 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMRAIRR*RFHSSM
Trigger: CATTGAGGAGTGGAACCTGCACCGGCGAATCGCCCT...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR GCA 90 bp GGAACATTGCAGCCCAGGAAAGTGATCTTTAAAGACAAGGTGGTCTCTTCAGTGTTCACCACGTCACACTaGGGAAAGAAACTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: GTLQPRKVIFKDKVVSSVFTTSH*GKKLLS
Trigger: GCTCAAGAGTTTCTTTCCGCAGTGTGACGTGGTGAA...CACTGAAGAGACCACCTTGTCTTTAAAGATCACTTTCCTGGGCTGCAATGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp TTGTTTTGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCTCGAGCCCTATCTTCTaGATTGGTTCTTATCTCAGA +
Preference number: 4 (lower is better)
Translates to: LFCSVLAAGDGDSPLRGFSSPIF*IGSYLR
Trigger: TCTGAGATAAGAACCAATGCAGAAGATAGGGCTCGA...GAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACAAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR GCA 90 bp TCTTCACTGGGATGCCAGAATGCTTCTGCTTGGAACAAAGAGGGATTAACCCTTCTGGAAGATGGTCTGTaGCCAGGTATTCATAGCCAA +
Preference number: 4 (lower is better)
Translates to: SSLGCQNASAWNKEGLTLLEDGL*PGIHSQ
Trigger: TTGGCTATGAATACCTGGGCACAGACCATCTTCCAG...AAGGGTTAATCCCTCTTTGTTCCAAGCAGAAGCATTCTGGCATCCCAGTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp TGTCTTTTCCAATACTGGGCTAATGCTGGGCCATTCCATTCAGCAGACACTTCCAAAAGAATCTCTGACTaGTGGTTATCGGCAGGGGTA +
Preference number: 4 (lower is better)
Translates to: CLFQYWANAGPFHSADTSKRISD*WLSAGV
Trigger: TACCCCTGCCGATAACCAGCAGTCAGAGATTCTTTT...GGAAGTGTCTGCTGAATGGAATGGCCCAGCATTAGCCCAGTATTGGAAAAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp ATGGCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTTCAGTTTTACCCATATaGAGAAGGGGACAATCTTTT +
Preference number: 4 (lower is better)
Translates to: MAHGLEWATGGHPCLLHISVLPI*RRGQSF
Trigger: AAAAGATTGTCCCCTTCTGCATATGGGTAAAACTGA...AATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp ATCAGAAGTCTTAGAAATCATGATTCATCTGGTTACAAATCCCATGAGTTTCTCAGGGGAAGAGGACGATaGGCAGCAGCGCCGTCACTG +
Preference number: 4 (lower is better)
Translates to: IRSLRNHDSSGYKSHEFLRGRGR*AAAPSL
Trigger: CAGTGACGGCGCTGCTGCCCATCGTCCTCTTCCCCT...GAGAAACTCATGGGATTTGTAACCAGATGAATCATGATTTCTAAGACTTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGATGAGCCTGGCCGGCTaGACTCCAACAAGCATCAGG +
Preference number: 4 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMMSLAG*TPTSIR
Trigger: CCTGATGCTTGTTGGAGTCCAGCCGGCCAGGCTCAT...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR CCA 90 bp AATGAACAAAACAGACCCCAGATCAGAGGAAGAGATGGCTTTCTTGTTAATTCTGAAGCATCATGGCAGTaGAGGCGGTGTTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: NEQNRPQIRGRDGFLVNSEASWQ*RRCCSA
Trigger: GGCTGAGCAACACCGCCTCCACTGCCATGATGCTTC...AGAATTAACAAGAAAGCCATCTCTTCCTCTGATCTGGGGTCTGTTTTGTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
CDS-3UTR CCA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGGAAGCATCATGGCAGTaGAGGCGGTGTTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMEASWQ*RRCCSA
Trigger: GGCTGAGCAACACCGCCTCCACTGCCATGATGCTTC...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR CCA 90 bp GTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATTTTTCAGGATGGCATTaGCAATGGGAAGCATCATGG +
Preference number: 4 (lower is better)
Translates to: VGHWRSPLLAAYWITEKNFSGWH*QWEASW
Trigger: CCATGATGCTTCCCATTGCCAATGCCATCCTGAAAA...ATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp CTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGATTTCTCTTCACTCTCCTaGCTGGGGTCCTTTCGAACC +
Preference number: 4 (lower is better)
Translates to: LRDTWALNCMKERESILDFSSLS*LGSFRT
Trigger: GGTTCGAAAGGACCCCAGCCAGGAGAGTGAAGAGAA...ATCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp TCTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGACTTTGGCTTCTGTGCTaGCGAGAAACTGCATCTCCG +
Preference number: 4 (lower is better)
Translates to: SERYLGFELHERERKYPRLWLLC*RETASP
Trigger: CGGAGATGCAGTTTCTCGCCAGCACAGAAGCCAAAG...TCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp GATGACACTGGGCTGTCTTGTATCCTAATGATAAAACAGCTAACTGATAAAGGACCCCAGGGTGGTCTTTaGCTTCTGTGCTGGCGAGAA +
Preference number: 4 (lower is better)
Translates to: DDTGLSCILMIKQLTDKGPQGGL*LLCWRE
Trigger: TTCTCGCCAGCACAGAAGCCAAAGACCACCCTGGGG...TCCTTTATCAGTTAGCTGTTTTATCATTAGGATACAAGACAGCCCAGTGTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp ACTGGGCTGTCTTGTATCCTAATGATAAAACAGCTAACTGATAAAGGAGCTTATAGCCGGCAGATCCAGTaGAACCTCTGTCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: TGLSCILMIKQLTDKGAYSRQIQ*NLCLPR
Trigger: CCTGGGGAGACAGAGGTTCCACTGGATCTGCCGGCT...ATAAGCTCCTTTATCAGTTAGCTGTTTTATCATTAGGATACAAGACAGCCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp GTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATAAGAAACTCTTGAGCTaGCCAAGCAGGATGAGGTTA +
Preference number: 4 (lower is better)
Translates to: VGHWRSPLLAAYWITEKNKKLLS*PSRMRL
Trigger: TAACCTCATCCTGCTTGGCCAGCTCAAGAGTTTCTT...ATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp GATGACACTGGGCTGTCTTGTATCCTAATGATAAAACAGCTAACTGATAAAGGAATTCCTCACAGCCTTTaGCCATGGCGAAGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: DDTGLSCILMIKQLTDKGIPHSL*PWRSPL
Trigger: GAGGGGGCTTCGCCATGGCCAAAGGCTGTGAGGAAT...TCCTTTATCAGTTAGCTGTTTTATCATTAGGATACAAGACAGCCCAGTGTCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp TCTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGATGCCCAGCTGGAAGATaGTCTGTGCCCAGGTATTCA +
Preference number: 4 (lower is better)
Translates to: SERYLGFELHERERKYPRCPAGR*SVPRYS
Trigger: TGAATACCTGGGCACAGACCATCTTCCAGCTGGGCA...TCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp TTGTTTTGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCGATCTGAGAGATACCTaGGCTTTGAACTGCATGAAA +
Preference number: 4 (lower is better)
Translates to: LFCSVLAAGDGDSPLRGFDLRDT*ALNCMK
Trigger: TTTCATGCAGTTCAAAGCCCAGGTATCTCTCAGATC...GAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACAAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp ATGATTCACTTATGCTGTATCAACAACAAGTGCAGCTGGGCGCTGCCTTCCCAGGATCTGAGAGATACCTaGGCTTTGAACTGCATGAAA +
Preference number: 4 (lower is better)
Translates to: MIHLCCINNKCSWALPSQDLRDT*ALNCMK
Trigger: TTTCATGCAGTTCAAAGCCCAGGTATCTCTCAGATC...CTGGGAAGGCAGCGCCCAGCTGCACTTGTTGTTGATACAGCATAAGTGAATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp GCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGATACAACTGGTGCAGAATaGGCACCAACTAAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: AQSHVLGKLSVPFPVSKDTTGAE*APTKQN
Trigger: ATTTTGCTTAGTTGGTGCCCATTCTGCACCAGTTGT...ATCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp AACAGCTGGAACAACTGGGTTGGAACATTGCAGCCCAGGAAAGTGATCTTTAAAGCTTACCACTTAAGGTaGGGCATGGAGAGATCAAGG +
Preference number: 4 (lower is better)
Translates to: NSWNNWVGTLQPRKVIFKAYHLR*GMERSR
Trigger: CCTTGATCTCTCCATGCCCCACCTTAAGTGGTAAGC...TTTAAAGATCACTTTCCTGGGCTGCAATGTTCCAACCCAGTTGTTCCAGCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp GTTAGCTGTGCCCATGGGAATGAATGGCCTCCTATCCCAACTGTACGAGACAAACAGAATGCTTCTGCTTaGAACAAAGAGGGATTAACC +
Preference number: 4 (lower is better)
Translates to: VSCAHGNEWPPIPTVRDKQNASA*NKEGLT
Trigger: GGTTAATCCCTCTTTGTTCCAAGCAGAAGCATTCTG...TTTGTCTCGTACAGTTGGGATAGGAGGCCATTCATTCCCATGGGCACAGCTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp CTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATTATTTGATAATGGCTCATGGACTTaGGTGGGCCACTGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: LEVTLACCILDYRKELFDNGSWT*VGHWRS
Trigger: TGACCTCCAGTGGCCCACTCAAGTCCATGAGCCATT...ATCAAATAATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR TCA 90 bp CTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATTATTTGATCTGTGCCCATGGGAATaGATGGCCTCCTATCCCAAC +
Preference number: 4 (lower is better)
Translates to: LEVTLACCILDYRKELFDLCPWE*MASYPN
Trigger: GTTGGGATAGGAGGCCATTCATTCCCATGGGCACAG...ATCAAATAATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp CTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATTATTTGATTCAGCAGACACTTCCTaGGGGCCTGAGCTCTTCACT +
Preference number: 4 (lower is better)
Translates to: LEVTLACCILDYRKELFDSADTS*GPELFT
Trigger: AGTGAAGAGCTCAGGCCCTCAGGAAGTGTCTGCTGA...ATCAAATAATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGTTTTGCATCCAGGATTaGAGAGGCTGGCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMFCIQD*RGWPSQ
Trigger: CTGGCTGGGCCAGCCTCTTCAATCCTGGATGCAAAA...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR GCA 90 bp CTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGATGGTCTTTGGCTTCTGTaGTGGCGAGAAACTGCATCT +
Preference number: 4 (lower is better)
Translates to: LRDTWALNCMKERESILDGLWLL*WRETAS
Trigger: AGATGCAGTTTCTCGCCAGCACAGAAGCCAAAGACC...ATCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp AATGAACAAAACAGACCCCAGATCAGAGGAAGAGATGGCTTTCTTGTTAATTCTACATTCTCCAGGGGGTaGAGCTGCCCACCAATCCAT +
Preference number: 4 (lower is better)
Translates to: NEQNRPQIRGRDGFLVNSTFSRG*SCPPIH
Trigger: ATGGATTGGTGGGCAGCTGCACCCCCTGGAGAATGT...AGAATTAACAAGAAAGCCATCTCTTCCTCTGATCTGGGGTCTGTTTTGTTCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
CDS-3UTR GCA 90 bp CTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATTATTTGATACATTCTCCAGGGGGTaGAGCTGCCCACCAATCCAT +
Preference number: 4 (lower is better)
Translates to: LEVTLACCILDYRKELFDTFSRG*SCPPIH
Trigger: ATGGATTGGTGGGCAGCTGCACCCCCTGGAGAATGT...ATCAAATAATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR GCA 90 bp ACTGGGCTGTCTTGTATCCTAATGATAAAACAGCTAACTGATAAAGGAGCTTATATCAGATACAGGGGGTaGACTCTCAGGCGGATGGCC +
Preference number: 4 (lower is better)
Translates to: TGLSCILMIKQLTDKGAYIRYRG*TLRRMA
Trigger: GGCCATCCGCCTGAGAGTGCACCCCCTGTATCTGAT...ATAAGCTCCTTTATCAGTTAGCTGTTTTATCATTAGGATACAAGACAGCCCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR GCA 90 bp AACAGCTGGAACAACTGGGTTGGAACATTGCAGCCCAGGAAAGTGATCTTTAAACTGGAAGATGGTCTGTaGCCAGGTATTCATAGCCAA +
Preference number: 4 (lower is better)
Translates to: NSWNNWVGTLQPRKVIFKLEDGL*PGIHSQ
Trigger: TTGGCTATGAATACCTGGGCACAGACCATCTTCCAG...TTTAAAGATCACTTTCCTGGGCTGCAATGTTCCAACCCAGTTGTTCCAGCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp TCTTCACTGGGATGCCAGAATGCTTCTGCTTGGAACAAAGAGGGATTAACCCTTGAGGTCACCCTTGCTTaGTGCATATTGGATTACAGA +
Preference number: 4 (lower is better)
Translates to: SSLGCQNASAWNKEGLTLEVTLA*CILDYR
Trigger: TCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTC...AAGGGTTAATCCCTCTTTGTTCCAAGCAGAAGCATTCTGGCATCCCAGTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGGTGTCGAGGAAGTACTaGGGGCAGACCTTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMVSRKY*GQTLLE
Trigger: CTCCAACAAGGTCTGCCCCCAGTACTTCCTCGACAC...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR CCA 90 bp CTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATTATTTGATCAATGGGAAGCATCATaGCAGTGGAGGCGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: LEVTLACCILDYRKELFDQWEAS*QWRRCC
Trigger: GCAACACCGCCTCCACTGCCATGATGCTTCCCATTG...ATCAAATAATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp CCTATGGTTTCATGGATAATGCTTGTTGTGTTCACTGAGGTAAATGATCCAAAGCAATGGGAAGCATCATaGCAGTGGAGGCGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: PMVSWIMLVVFTEVNDPKQWEAS*QWRRCC
Trigger: GCAACACCGCCTCCACTGCCATGATGCTTCCCATTG...CTTTGGATCATTTACCTCAGTGAACACAACAAGCATTATCCATGAAACCATAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS-3UTR CCA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGCAATGGGAAGCATCATaGCAGTGGAGGCGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMQWEAS*QWRRCC
Trigger: GCAACACCGCCTCCACTGCCATGATGCTTCCCATTG...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR CCA 90 bp TGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATTTTTTCAGGATGGCATTaGCAATGGGAAGCATCATGG +
Preference number: 4 (lower is better)
Translates to: WATGGHPCLLHIGLQKRIFSGWH*QWEASW
Trigger: CCATGATGCTTCCCATTGCCAATGCCATCCTGAAAA...AATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGCTGTGCCCCCAATACTaGCTGAGTAGGGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMLCPQY*LSRGWR
Trigger: TCTCCATCCCCTACTCAGCCAGTATTGGGGGCACAG...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR CCA 90 bp CTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGATATTGGCCAAGGTGGGTaGCAATGCTGTGACATTGAC +
Preference number: 4 (lower is better)
Translates to: LRDTWALNCMKERESILDIGQGG*QCCDID
Trigger: GTCAATGTCACAGCATTGCCACCCACCTTGGCCAAT...ATCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp CTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGATTCCGAAATGTGTCATTaGCCAAGGTGGGTGGCAATG +
Preference number: 4 (lower is better)
Translates to: LRDTWALNCMKERESILDSEMCH*PRWVAM
Trigger: CATTGCCACCCACCTTGGCCAATGACACATTTCGGA...ATCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp TCTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGATCCGAAATGTGTCATTaGCCAAGGTGGGTGGCAATG +
Preference number: 4 (lower is better)
Translates to: SERYLGFELHERERKYPRSEMCH*PRWVAM
Trigger: CATTGCCACCCACCTTGGCCAATGACACATTTCGGA...TCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp TGCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGAATCGAAAGTAATCACTaGGGGATAATGTTAGCTGTG +
Preference number: 4 (lower is better)
Translates to: CTVSCPWKAICPFPCLQGIESNH*GIMLAV
Trigger: CACAGCTAACATTATCCCCCAGTGATTACTTTCGAT...TCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp GCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGATATCGAAAGTAATCACTaGGGGATAATGTTAGCTGTG +
Preference number: 4 (lower is better)
Translates to: AQSHVLGKLSVPFPVSKDIESNH*GIMLAV
Trigger: CACAGCTAACATTATCCCCCAGTGATTACTTTCGAT...ATCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TGCTGGTTATCGGCAGGGGTAAAACAACTGGTGCAGAATGGGCACCAACTAAGCTCTTTAAAGACAAGGTaGTCTCTTCAGTGTAATCGA +
Preference number: 4 (lower is better)
Translates to: CWLSAGVKQLVQNGHQLSSLKTR*SLQCNR
Trigger: TCGATTACACTGAAGAGACCACCTTGTCTTTAAAGA...GCTTAGTTGGTGCCCATTCTGCACCAGTTGTTTTACCCCTGCCGATAACCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATTTGTCTTTTCCAATACTaGGCTAATGCTGGGCCATTC +
Preference number: 4 (lower is better)
Translates to: WATGGHPCLLHIGLQKRICLFQY*ANAGPF
Trigger: GAATGGCCCAGCATTAGCCCAGTATTGGAAAAGACA...AATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TCTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGAAGCAGAGTAAGGGGGTaGAGAGTAATGAGGGTGACA +
Preference number: 4 (lower is better)
Translates to: SERYLGFELHERERKYPRSRVRG*RVMRVT
Trigger: TGTCACCCTCATTACTCTCCACCCCCTTACTCTGCT...TCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
CDS-3UTR CCA 90 bp CTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATTATTTGATGCCAGCCTCTTGAGCTaGCCAAGCAGGATGAGGTTA +
Preference number: 4 (lower is better)
Translates to: LEVTLACCILDYRKELFDASLLS*PSRMRL
Trigger: TAACCTCATCCTGCTTGGCCAGCTCAAGAGGCTGGC...ATCAAATAATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413164.6
CDS-3UTR CCA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGGCCAGCCTCTTGAGCTaGCCAAGCAGGATGAGGTTA +
Preference number: 4 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMASLLS*PSRMRL
Trigger: TAACCTCATCCTGCTTGGCCAGCTCAAGAGGCTGGC...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR TCA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGAGTAGGGGATGGAGATaGGGAAGCCCTTCCAGATGT +
Preference number: 4 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMSRGWR*GSPSRC
Trigger: ACATCTGGAAGGGCTTCCTCATCTCCATCCCCTACT...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR TCA 90 bp ACTGGGCTGTCTTGTATCCTAATGATAAAACAGCTAACTGATAAAGGAGCTTATAATGGCTCATGGACTTaGGTGGGCCACTGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: TGLSCILMIKQLTDKGAYNGSWT*VGHWRS
Trigger: TGACCTCCAGTGGCCCACTCAAGTCCATGAGCCATT...ATAAGCTCCTTTATCAGTTAGCTGTTTTATCATTAGGATACAAGACAGCCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR TCA 90 bp TCTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGATGCAGCCCAGGAAAGTaGTCTTTAAAGACAAGGTGG +
Preference number: 4 (lower is better)
Translates to: SERYLGFELHERERKYPRCSPGK*SLKTRW
Trigger: CCACCTTGTCTTTAAAGATCACTTTCCTGGGCTGCA...TCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp GTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATGTCACCCTTGCTTGCTaGATATTGGATTACAGAAAA +
Preference number: 4 (lower is better)
Translates to: VGHWRSPLLAAYWITEKNVTLAC*ILDYRK
Trigger: TTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGAC...ATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR GCA 90 bp GTTAGCTGTGCCCATGGGAATGAATGGCCTCCTATCCCAACTGTACGAGACAAATCAGTTTTACCCATATaGAGAAGGGGACAATCTTTT +
Preference number: 4 (lower is better)
Translates to: VSCAHGNEWPPIPTVRDKSVLPI*RRGQSF
Trigger: AAAAGATTGTCCCCTTCTGCATATGGGTAAAACTGA...TTTGTCTCGTACAGTTGGGATAGGAGGCCATTCATTCCCATGGGCACAGCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp GCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGATTCAGTTTTACCCATATaGAGAAGGGGACAATCTTTT +
Preference number: 4 (lower is better)
Translates to: AQSHVLGKLSVPFPVSKDSVLPI*RRGQSF
Trigger: AAAAGATTGTCCCCTTCTGCATATGGGTAAAACTGA...ATCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp CCTATGGTTTCATGGATAATGCTTGTTGTGTTCACTGAGGTAAATGATCCAAAGTGGACAAGAACGAGGTaGTCACCATCATCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: PMVSWIMLVVFTEVNDPKWTRTR*SPSSPG
Trigger: TCCTGGGGATGATGGTGACCACCTCGTTCTTGTCCA...CTTTGGATCATTTACCTCAGTGAACACAACAAGCATTATCCATGAAACCATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS-3UTR CCA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGTGGACAAGAACGAGGTaGTCACCATCATCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMWTRTR*SPSSPG
Trigger: TCCTGGGGATGATGGTGACCACCTCGTTCTTGTCCA...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR CCA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGGGATGGCATTGGCAATaGGAAGCATCATGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMGWHWQ*EASWQW
Trigger: CCACTGCCATGATGCTTCCCATTGCCAATGCCATCC...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR CCA 90 bp GATGACACTGGGCTGTCTTGTATCCTAATGATAAAACAGCTAACTGATAAAGGATTCTCTTCACTCTCCTaGCTGGGGTCCTTTCGAACC +
Preference number: 4 (lower is better)
Translates to: DDTGLSCILMIKQLTDKGFSSLS*LGSFRT
Trigger: GGTTCGAAAGGACCCCAGCCAGGAGAGTGAAGAGAA...TCCTTTATCAGTTAGCTGTTTTATCATTAGGATACAAGACAGCCCAGTGTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGTTCTCTTCACTCTCCTaGCTGGGGTCCTTTCGAACC +
Preference number: 4 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMFSSLS*LGSFRT
Trigger: GGTTCGAAAGGACCCCAGCCAGGAGAGTGAAGAGAA...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR CCA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGATTCATCCTCCTTCCTaGAGTCAGCCGGCAGATCCA +
Preference number: 4 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMIHPPS*SQPADP
Trigger: TGGATCTGCCGGCTGACTCCAGGAAGGAGGATGAAT...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR CCA 90 bp TCTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGAATGGGCCCCAGGTTCTaGTATTCTTCCCGAATTACA +
Preference number: 4 (lower is better)
Translates to: SERYLGFELHERERKYPRMGPRF*YSSRIT
Trigger: TGTAATTCGGGAAGAATACCAGAACCTGGGGCCCAT...TCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp ATCAGAAGTCTTAGAAATCATGATTCATCTGGTTACAAATCCCATGAGTTTCTCATTCCTCACAGCCTTTaGCCATGGCGAAGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: IRSLRNHDSSGYKSHEFLIPHSL*PWRSPL
Trigger: GAGGGGGCTTCGCCATGGCCAAAGGCTGTGAGGAAT...GAGAAACTCATGGGATTTGTAACCAGATGAATCATGATTTCTAAGACTTCTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TGCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGATCTTTAAAGACAAGGTaGTCTCTTCAGTGTAATCGA +
Preference number: 4 (lower is better)
Translates to: CTVSCPWKAICPFPCLQGSLKTR*SLQCNR
Trigger: TCGATTACACTGAAGAGACCACCTTGTCTTTAAAGA...TCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp AACAGCTGGAACAACTGGGTTGGAACATTGCAGCCCAGGAAAGTGATCTTTAAAAGAATCTCTGACTGCTaGTTATCGGCAGGGGTAAAA +
Preference number: 4 (lower is better)
Translates to: NSWNNWVGTLQPRKVIFKRISDC*LSAGVK
Trigger: TTTTACCCCTGCCGATAACCAGCAGTCAGAGATTCT...TTTAAAGATCACTTTCCTGGGCTGCAATGTTCCAACCCAGTTGTTCCAGCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TCTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGACACTTGGAAAGGAGGTaGAGCTCAACTTCCAACTCA +
Preference number: 4 (lower is better)
Translates to: SERYLGFELHERERKYPRHLERR*SSTSNS
Trigger: TGAGTTGGAAGTTGAGCTCCACCTCCTTTCCAAGTG...TCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp ACTGGGCTGTCTTGTATCCTAATGATAAAACAGCTAACTGATAAAGGAGCTTATAGTAGGGGATGGAGATaGGGAAGCCCTTCCAGATGT +
Preference number: 4 (lower is better)
Translates to: TGLSCILMIKQLTDKGAYSRGWR*GSPSRC
Trigger: ACATCTGGAAGGGCTTCCTCATCTCCATCCCCTACT...ATAAGCTCCTTTATCAGTTAGCTGTTTTATCATTAGGATACAAGACAGCCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR GCA 90 bp TCTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGAACTGGGATGCCAGAATaGTTCTGCTTGGAACAAAGA +
Preference number: 4 (lower is better)
Translates to: SERYLGFELHERERKYPRTGMPE*FCLEQR
Trigger: TCTTTGTTCCAAGCAGAAGCATTCTGGCATCCCAGT...TCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp ACTGGGCTGTCTTGTATCCTAATGATAAAACAGCTAACTGATAAAGGAGCTTATTGGACAAGAACGAGGTaGTCACCATCATCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: TGLSCILMIKQLTDKGAYWTRTR*SPSSPG
Trigger: TCCTGGGGATGATGGTGACCACCTCGTTCTTGTCCA...ATAAGCTCCTTTATCAGTTAGCTGTTTTATCATTAGGATACAAGACAGCCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGTGTTGCTCAGCCACATaGACAAGAACGAGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMCCSAT*TRTRWS
Trigger: TGACCACCTCGTTCTTGTCCATGTGGCTGAGCAACA...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR CCA 90 bp ACTGGGCTGTCTTGTATCCTAATGATAAAACAGCTAACTGATAAAGGAGCTTATCTTTGGCTTCTGTGCTaGCGAGAAACTGCATCTCCG +
Preference number: 4 (lower is better)
Translates to: TGLSCILMIKQLTDKGAYLWLLC*RETASP
Trigger: CGGAGATGCAGTTTCTCGCCAGCACAGAAGCCAAAG...ATAAGCTCCTTTATCAGTTAGCTGTTTTATCATTAGGATACAAGACAGCCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp ATCAGAAGTCTTAGAAATCATGATTCATCTGGTTACAAATCCCATGAGTTTCTCTCTGTCTCCCCAGGGTaGTCTTTGGCTTCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: IRSLRNHDSSGYKSHEFLSVSPG*SLASVL
Trigger: CAGCACAGAAGCCAAAGACCACCCTGGGGAGACAGA...GAGAAACTCATGGGATTTGTAACCAGATGAATCATGATTTCTAAGACTTCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp TGTCTTTTCCAATACTGGGCTAATGCTGGGCCATTCCATTCAGCAGACACTTCCTCTTTAAAGACAAGGTaGTCTCTTCAGTGTAATCGA +
Preference number: 4 (lower is better)
Translates to: CLFQYWANAGPFHSADTSSLKTR*SLQCNR
Trigger: TCGATTACACTGAAGAGACCACCTTGTCTTTAAAGA...GGAAGTGTCTGCTGAATGGAATGGCCCAGCATTAGCCCAGTATTGGAAAAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp AATGAACAAAACAGACCCCAGATCAGAGGAAGAGATGGCTTTCTTGTTAATTCTCTGGAACAACTGGGTTaGAACATTGCAGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: NEQNRPQIRGRDGFLVNSLEQLG*NIAAQE
Trigger: TTCCTGGGCTGCAATGTTCCAACCCAGTTGTTCCAG...AGAATTAACAAGAAAGCCATCTCTTCCTCTGATCTGGGGTCTGTTTTGTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
CDS-3UTR CCA 90 bp AATGAACAAAACAGACCCCAGATCAGAGGAAGAGATGGCTTTCTTGTTAATTCTAACAGCTGGAACAACTaGGTTGGAACATTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: NEQNRPQIRGRDGFLVNSNSWNN*VGTLQP
Trigger: GGGCTGCAATGTTCCAACCCAGTTGTTCCAGCTGTT...AGAATTAACAAGAAAGCCATCTCTTCCTCTGATCTGGGGTCTGTTTTGTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
CDS-3UTR CCA 90 bp TCTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGATGTCTTTTCCAATACTaGGCTAATGCTGGGCCATTC +
Preference number: 4 (lower is better)
Translates to: SERYLGFELHERERKYPRCLFQY*ANAGPF
Trigger: GAATGGCCCAGCATTAGCCCAGTATTGGAAAAGACA...TCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp GATGACACTGGGCTGTCTTGTATCCTAATGATAAAACAGCTAACTGATAAAGGATCTGTCTCCCCAGGGTaGTCTTTGCTGTGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: DDTGLSCILMIKQLTDKGSVSPG*SLLCSL
Trigger: AAGAGAACACAGCAAAGACCACCCTGGGGAGACAGA...TCCTTTATCAGTTAGCTGTTTTATCATTAGGATACAAGACAGCCCAGTGTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413164.6
CDS-3UTR CCA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGTCTGTCTCCCCAGGGTaGTCTTTGCTGTGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMSVSPG*SLLCSL
Trigger: AAGAGAACACAGCAAAGACCACCCTGGGGAGACAGA...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR CCA 90 bp CCTATGGTTTCATGGATAATGCTTGTTGTGTTCACTGAGGTAAATGATCCAAAGCTATCTCTCAAGATGTaGCTCCTGTCTTTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: PMVSWIMLVVFTEVNDPKLSLKM*LLSLGP
Trigger: GGGACCCAAAGACAGGAGCCACATCTTGAGAGATAG...CTTTGGATCATTTACCTCAGTGAACACAACAAGCATTATCCATGAAACCATAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS-3UTR CCA 90 bp AAAGCCACAGGGGCAGATCTGCCATCTATCTCTCAAGATGTGGCTCCTGTCTTTAAACCTATGGTTTCATaGATAATGCTTGTTGTGTTC +
Preference number: 4 (lower is better)
Translates to: KATGADLPSISQDVAPVFKPMVS*IMLVVF
Trigger: GAACACAACAAGCATTATCCATGAAACCATAGGTTT...AAAGACAGGAGCCACATCTTGAGAGATAGATGGCAGATCTGCCCCTGTGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS-3UTR GCA 90 bp TCTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGATCGAGCCCTATCTTCTaGATTGGTTCTTATCTCAGA +
Preference number: 4 (lower is better)
Translates to: SERYLGFELHERERKYPRSSPIF*IGSYLR
Trigger: TCTGAGATAAGAACCAATGCAGAAGATAGGGCTCGA...TCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGATGGGCCCCAGGTTCTaGTATTCTTCCCGAATTACA +
Preference number: 4 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMMGPRF*YSSRIT
Trigger: TGTAATTCGGGAAGAATACCAGAACCTGGGGCCCAT...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR CCA 90 bp CTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATTATTTGATCTGGTTGTGAACAGCTaGAACAACTGGGTTGGAACA +
Preference number: 4 (lower is better)
Translates to: LEVTLACCILDYRKELFDLVVNS*NNWVGT
Trigger: TGTTCCAACCCAGTTGTTCCAGCTGTTCACAACCAG...ATCAAATAATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp CTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGATACAGTCTCATGTCCTTaGAAAGCTATCTGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: LRDTWALNCMKERESILDTVSCP*KAICPF
Trigger: AAAGGGACAGATAGCTTTCCAAGGACATGAGACTGT...ATCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGACATGCAGAAAAGGATaGAAACAGCCTGTTCGGCAA +
Preference number: 4 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMTCRKG*KQPVRQ
Trigger: TTGCCGAACAGGCTGTTTTCATCCTTTTCTGCATGT...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR TCA 90 bp ACTGGGCTGTCTTGTATCCTAATGATAAAACAGCTAACTGATAAAGGAGCTTATTGCAGCCCAGGAAAGTaGTCTTTAAAGACAAGGTGG +
Preference number: 4 (lower is better)
Translates to: TGLSCILMIKQLTDKGAYCSPGK*SLKTRW
Trigger: CCACCTTGTCTTTAAAGATCACTTTCCTGGGCTGCA...ATAAGCTCCTTTATCAGTTAGCTGTTTTATCATTAGGATACAAGACAGCCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp CTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATTATTTGATACTGGAGGTCACCCTTaGTTGCTGCATATTGGATTA +
Preference number: 4 (lower is better)
Translates to: LEVTLACCILDYRKELFDTGGHP*LLHIGL
Trigger: TAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGT...ATCAAATAATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp GATGACACTGGGCTGTCTTGTATCCTAATGATAAAACAGCTAACTGATAAAGGATTTTCAGGATGGCATTaGCAATGGGAAGCATCATGG +
Preference number: 4 (lower is better)
Translates to: DDTGLSCILMIKQLTDKGFSGWH*QWEASW
Trigger: CCATGATGCTTCCCATTGCCAATGCCATCCTGAAAA...TCCTTTATCAGTTAGCTGTTTTATCATTAGGATACAAGACAGCCCAGTGTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGTTTTCAGGATGGCATTaGCAATGGGAAGCATCATGG +
Preference number: 4 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMFSGWH*QWEASW
Trigger: CCATGATGCTTCCCATTGCCAATGCCATCCTGAAAA...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR CCA 90 bp CTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATTATTTGATAGAGACTTTTCAGGATaGCATTGGCAATGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: LEVTLACCILDYRKELFDRDFSG*HWQWEA
Trigger: TGCTTCCCATTGCCAATGCCATCCTGAAAAGTCTCT...ATCAAATAATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGAGAGACTTTTCAGGATaGCATTGGCAATGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMRDFSG*HWQWEA
Trigger: TGCTTCCCATTGCCAATGCCATCCTGAAAAGTCTCT...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR CCA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGTTTCGAACCTCCTTCTaGCCAAAGAGACTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMFRTSF*PKRLFR
Trigger: CCTGAAAAGTCTCTTTGGCCAGAAGGAGGTTCGAAA...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR CCA 90 bp CTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATTATTTGATAAGAAACTCTTGAGCTaGCCAAGCAGGATGAGGTTA +
Preference number: 4 (lower is better)
Translates to: LEVTLACCILDYRKELFDKKLLS*PSRMRL
Trigger: TAACCTCATCCTGCTTGGCCAGCTCAAGAGTTTCTT...ATCAAATAATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp ATCAGAAGTCTTAGAAATCATGATTCATCTGGTTACAAATCCCATGAGTTTCTCCTGGAACAACTGGGTTaGAACATTGCAGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: IRSLRNHDSSGYKSHEFLLEQLG*NIAAQE
Trigger: TTCCTGGGCTGCAATGTTCCAACCCAGTTGTTCCAG...GAGAAACTCATGGGATTTGTAACCAGATGAATCATGATTTCTAAGACTTCTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGTCGAGCCCTATCTTCTaGATTGGTTCTTATCTCAGA +
Preference number: 4 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMSSPIF*IGSYLR
Trigger: TCTGAGATAAGAACCAATGCAGAAGATAGGGCTCGA...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR GCA 90 bp ACTGGGCTGTCTTGTATCCTAATGATAAAACAGCTAACTGATAAAGGAGCTTATACTGGAGGTCACCCTTaGTTGCTGCATATTGGATTA +
Preference number: 4 (lower is better)
Translates to: TGLSCILMIKQLTDKGAYTGGHP*LLHIGL
Trigger: TAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGT...ATAAGCTCCTTTATCAGTTAGCTGTTTTATCATTAGGATACAAGACAGCCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp ACTGGGCTGTCTTGTATCCTAATGATAAAACAGCTAACTGATAAAGGAGCTTATAAGAAACTCTTGAGCTaGCCAAGCAGGATGAGGTTA +
Preference number: 4 (lower is better)
Translates to: TGLSCILMIKQLTDKGAYKKLLS*PSRMRL
Trigger: TAACCTCATCCTGCTTGGCCAGCTCAAGAGTTTCTT...ATAAGCTCCTTTATCAGTTAGCTGTTTTATCATTAGGATACAAGACAGCCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp GATGACACTGGGCTGTCTTGTATCCTAATGATAAAACAGCTAACTGATAAAGGAGATCTGAGAGATACCTaGGCTTTGAACTGCATGAAA +
Preference number: 4 (lower is better)
Translates to: DDTGLSCILMIKQLTDKGDLRDT*ALNCMK
Trigger: TTTCATGCAGTTCAAAGCCCAGGTATCTCTCAGATC...TCCTTTATCAGTTAGCTGTTTTATCATTAGGATACAAGACAGCCCAGTGTCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp CTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATTATTTGATACAACTGGTGCAGAATaGGCACCAACTAAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: LEVTLACCILDYRKELFDTTGAE*APTKQN
Trigger: ATTTTGCTTAGTTGGTGCCCATTCTGCACCAGTTGT...ATCAAATAATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CCA 90 bp CTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATTATTTGATACAGTCTCATGTCCTTaGAAAGCTATCTGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: LEVTLACCILDYRKELFDTVSCP*KAICPF
Trigger: AAAGGGACAGATAGCTTTCCAAGGACATGAGACTGT...ATCAAATAATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR TCA 90 bp ACTGGGCTGTCTTGTATCCTAATGATAAAACAGCTAACTGATAAAGGAGCTTATTCAGGGAAATGCCCATaGTTCACTTATGCTGTATCA +
Preference number: 4 (lower is better)
Translates to: TGLSCILMIKQLTDKGAYSGKCP*FTYAVS
Trigger: TGATACAGCATAAGTGAATCATGGGCATTTCCCTGA...ATAAGCTCCTTTATCAGTTAGCTGTTTTATCATTAGGATACAAGACAGCCCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR GCA 90 bp ACTGGGCTGTCTTGTATCCTAATGATAAAACAGCTAACTGATAAAGGAGCTTATTCGAGCCCTATCTTCTaGATTGGTTCTTATCTCAGA +
Preference number: 4 (lower is better)
Translates to: TGLSCILMIKQLTDKGAYSSPIF*IGSYLR
Trigger: TCTGAGATAAGAACCAATGCAGAAGATAGGGCTCGA...ATAAGCTCCTTTATCAGTTAGCTGTTTTATCATTAGGATACAAGACAGCCCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp CTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGATCCCTATCTTCTGCATTaGTTCTTATCTCAGATTTAT +
Preference number: 4 (lower is better)
Translates to: LRDTWALNCMKERESILDPYLLH*FLSQIY
Trigger: ATAAATCTGAGATAAGAACCAATGCAGAAGATAGGG...ATCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp TCTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGACCCTATCTTCTGCATTaGTTCTTATCTCAGATTTAT +
Preference number: 4 (lower is better)
Translates to: SERYLGFELHERERKYPRPYLLH*FLSQIY
Trigger: ATAAATCTGAGATAAGAACCAATGCAGAAGATAGGG...TCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR TCA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGATCAGAATTAGAGACTaGGATTTAGCTGATCTTCAC +
Preference number: 4 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMIRIRD*DLADLH
Trigger: GTGAAGATCAGCTAAATCTCAGTCTCTAATTCTGAT...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR CCA 90 bp GATGACACTGGGCTGTCTTGTATCCTAATGATAAAACAGCTAACTGATAAAGGACCCTATCTTCTGCATTaGTTCTTATCTCAGATTTAT +
Preference number: 4 (lower is better)
Translates to: DDTGLSCILMIKQLTDKGPYLLH*FLSQIY
Trigger: ATAAATCTGAGATAAGAACCAATGCAGAAGATAGGG...TCCTTTATCAGTTAGCTGTTTTATCATTAGGATACAAGACAGCCCAGTGTCATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CCA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGCCCTATCTTCTGCATTaGTTCTTATCTCAGATTTAT +
Preference number: 4 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMPYLLH*FLSQIY
Trigger: ATAAATCTGAGATAAGAACCAATGCAGAAGATAGGG...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS GCA 90 bp CAGCACCAGCAGCCGCCGCGCGCTCCACACCTTCTTGGCCGCTGCTaGCAGCGCCGCCATCAGCGCGATCGCCTGGCGGTACGGGCCGGC +
Preference number: 5 (lower is better)
Translates to: QHQQPPRAPHLLGRC*QRRHQRDRLAVRAG
Trigger: GCCGGCCCGTACCGCCAGGCGATCGCGCTGATGGCGGCGCTGGCAGCAGCGGCCAAGAAGGTGTGGAGCGCGCGGCGGCTGCTGGTGCTG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000413164.6
CDS GCA 90 bp CAGCAGCACCAGCAGCCGCCGCGCGCTCCACACCTTCTTGGCCGCTaGTGCCAGCGCCGCCATCAGCGCGATCGCCTGGCGGTACGGGCC +
Preference number: 5 (lower is better)
Translates to: QQHQQPPRAPHLLGR*CQRRHQRDRLAVRA
Trigger: GGCCCGTACCGCCAGGCGATCGCGCTGATGGCGGCGCTGGCAGCAGCGGCCAAGAAGGTGTGGAGCGCGCGGCGGCTGCTGGTGCTGCTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000413164.6
CDS TCA 90 bp CCTTGGGCGGGAGGGCGAAGACCACCGGCAGCAGCGCGAGCGGCGTaGACAGCAGCACCAGCAGCCGCCGCGCGCTCCACACCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: PWAGGRRPPAAARAA*TAAPAAAARSTPSW
Trigger: CCAAGAAGGTGTGGAGCGCGCGGCGGCTGCTGGTGCTGCTGTTCACGCCGCTCGCGCTGCTGCCGGTGGTCTTCGCCCTCCCGCCCAAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000413164.6
CDS TCA 90 bp CGAGGAAGTACTGGGGGCAGACCTTGTTGGAGGGCAAGATGCCCATaGAGGGGAAGAGGACGATGGGCAGCAGCGCCGTCACTGAGAGCG +
Preference number: 5 (lower is better)
Translates to: RGSTGGRPCWRARCP*RGRGRWAAAPSLRA
Trigger: CGCTCTCAGTGACGGCGCTGCTGCCCATCGTCCTCTTCCCCTTCATGGGCATCTTGCCCTCCAACAAGGTCTGCCCCCAGTACTTCCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000372121.5
ENST00000413164.6
ENST00000417157.2
ENST00000420568.5
ENST00000468915.5
ENST00000472148.5
ENST00000495082.5
CDS GCA 90 bp CAGTACACCGCCATGAGCAGGATGACAAACAAGCAGCGGCCTTCCTaGAGGAGGAGATGCATGCTCAGAGGGTCAGCGGGGCTCGGGGCA +
Preference number: 5 (lower is better)
Translates to: QYTAMSRMTNKQRPS*RRRCMLRGSAGLGA
Trigger: TGCCCCGAGCCCCGCTGACCCTCTGAGCATGCATCTCCTCCTGCAGGAAGGCCGCTGCTTGTTTGTCATCCTGCTCATGGCGGTGTACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495082.5
CDS TCA 90 bp CCTCACAGCCTTTGGCCATGGCGAAGCCCCCTCCCAGGAGAAGGATaGTGTTCCAGGGCACTGTCTCCTGGGCCTTCTTCCAGGTCAGCA +
Preference number: 5 (lower is better)
Translates to: PHSLWPWRSPLPGEG*CSRALSPGPSSRSA
Trigger: TGCTGACCTGGAAGAAGGCCCAGGAGACAGTGCCCTGGAACATCATCCTTCTCCTGGGAGGGGGCTTCGCCATGGCCAAAGGCTGTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000468915.5
ENST00000472148.5
ENST00000495082.5
CDS GCA 90 bp GGCTGGACTCCAACAAGCATCAGGATCTTGAGGGCGATTCGCCGGTaGAGGTTCCACTCCTCAATGGCGCTGGCCATGATCAGCCCACTG +
Preference number: 5 (lower is better)
Translates to: GWTPTSIRILRAIRR*RFHSSMALAMISPL
Trigger: CAGTGGGCTGATCATGGCCAGCGCCATTGAGGAGTGGAACCTGCACCGGCGAATCGCCCTCAAGATCCTGATGCTTGTTGGAGTCCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000372121.5
ENST00000413164.6
ENST00000417157.2
ENST00000420568.5
ENST00000468915.5
ENST00000472148.5
ENST00000495082.5
CDS-3UTR CAA 90 bp ACCCTCAGAGGCTTAGGAAAGGGAAGTGTGACGAGTCAGGGCCCCTGGGCTGGTACAAGCATCAGGATCTaGAGGGCGATTCGCCGGTGC +
Preference number: 5 (lower is better)
Translates to: TLRGLGKGSVTSQGPWAGTSIRI*RAIRRC
Trigger: GCACCGGCGAATCGCCCTCAAGATCCTGATGCTTGT...ACCAGCCCAGGGGCCCTGACTCGTCACACTTCCCTTTCCTAAGCCTCTGAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp AAGGCCACCTGCTGGGACAAGCAGCAACTGACCGCCTTGCAGCCACAGAGGCCTGTCCGCACCATGTCTTaGACCAGCAAGTGTCCAGAG +
Preference number: 5 (lower is better)
Translates to: KATCWDKQQLTALQPQRPVRTMS*TSKCPE
Trigger: CTCTGGACACTTGCTGGTCAAAGACATGGTGCGGAC...AGGCCTCTGTGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCCAGCAGGTGGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS GCA 90 bp TCTGTCTCCCCAGGGTGGTCTTTGGCTTCTGTGCTGGCGAGAAACTaGATCTCCGTGGGCACAGTGTGTAGGCCGTTTCTCCGCACAGCA +
Preference number: 5 (lower is better)
Translates to: SVSPGWSLASVLARN*ISVGTVCRPFLRTA
Trigger: TGCTGTGCGGAGAAACGGCCTACACACTGTGCCCACGGAGATGCAGTTTCTCGCCAGCACAGAAGCCAAAGACCACCCTGGGGAGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000450298.5
ENST00000468915.5
ENST00000472148.5
ENST00000495082.5
CDS-3UTR CAA 90 bp ACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATATGCAGAAGGGCAGCAACTGACCGCCTaGCAGCCACAGAGGCCTATG +
Preference number: 5 (lower is better)
Translates to: TSSLGLTGTSQFYPYAEGQQLTA*QPQRPM
Trigger: CATAGGCCTCTGTGGCTGCAAGGCGGTCAGTTGCTG...CCCTTCTGCATATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp CATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTAAAGCAGCGGCCTTCCTaGGGCGGGAGGGCGAAGACC +
Preference number: 5 (lower is better)
Translates to: HGLEWATGGHPCLLHIGLKQRPS*GGRAKT
Trigger: GGTCTTCGCCCTCCCGCCCAAGGAAGGCCGCTGCTT...TAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000413164.6
CDS CCA 90 bp CAGGGTGGTCTTTGGCTTCTGTGCTGGCGAGAAACTGCATCTCCGTaGGCACAGTGTGTAGGCCGTTTCTCCGCACAGCAGCTGTGTTCT +
Preference number: 5 (lower is better)
Translates to: QGGLWLLCWRETASP*AQCVGRFSAQQLCS
Trigger: AGAACACAGCTGCTGTGCGGAGAAACGGCCTACACACTGTGCCCACGGAGATGCAGTTTCTCGCCAGCACAGAAGCCAAAGACCACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000468915.5
ENST00000472148.5
ENST00000495082.5
CDS-3UTR CAA 90 bp TGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCAGCCTCTCCCCAGGGTGGTCTTaGGCTTCTGTGCTGGCGAGA +
Preference number: 5 (lower is better)
Translates to: CSVLAAGDGDSPLRGFSLSPGWS*ASVLAR
Trigger: TCTCGCCAGCACAGAAGCCAAAGACCACCCTGGGGA...GAGGCTGAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp AGCCACAGAGGCCTATGGGGGCCACATGTAGGAGAGTCCTGGCTGGAGGGGTCACACTGGAGGTCACCCTaGCTTGCTGCATATTGGATT +
Preference number: 5 (lower is better)
Translates to: SHRGLWGPHVGESWLEGSHWRSP*LAAYWI
Trigger: AATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTG...TGACCCCTCCAGCCAGGACTCTCCTACATGTGGCCCCCATAGGCCTCTGTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp TGTCTTTTCCAATACTGGGCTAATGCTGGGCCATTCCATTCAGCAGACACTTCCGCGCTCCACACCTTCTaGGCCGCTGCTGCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: CLFQYWANAGPFHSADTSALHTF*AAAASA
Trigger: GGCGCTGGCAGCAGCGGCCAAGAAGGTGTGGAGCGC...GGAAGTGTCTGCTGAATGGAATGGCCCAGCATTAGCCCAGTATTGGAAAAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279027.9
CDS GCA 90 bp CATATCAGCCCAGTCCGGGAAGGTGCCCAGCTGGAAGATGGTCTGTaGCCAGGTATTCATAGCCAAACTGAGCAGCAGGACACCCATCAG +
Preference number: 5 (lower is better)
Translates to: HISPVREGAQLEDGL*PGIHSQTEQQDTHQ
Trigger: CTGATGGGTGTCCTGCTGCTCAGTTTGGCTATGAATACCTGGGCACAGACCATCTTCCAGCTGGGCACCTTCCCGGACTGGGCTGATATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
ENST00000495082.5
CDS-3UTR CAA 90 bp ATGATTCACTTATGCTGTATCAACAACAAGTGCAGCTGGGCGCTGCCTTCCCAGGGTGCACTGGGAGGCTaGGGAGGCTGGTGTAGCAGG +
Preference number: 5 (lower is better)
Translates to: MIHLCCINNKCSWALPSQGALGG*GGWCSR
Trigger: CCTGCTACACCAGCCTCCCAAGCCTCCCAGTGCACC...CTGGGAAGGCAGCGCCCAGCTGCACTTGTTGTTGATACAGCATAAGTGAATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp AAAGCCACAGGGGCAGATCTGCCATCTATCTCTCAAGATGTGGCTCCTGTCTTTGGTGCACTGGGAGGCTaGGGAGGCTGGTGTAGCAGG +
Preference number: 5 (lower is better)
Translates to: KATGADLPSISQDVAPVFGALGG*GGWCSR
Trigger: CCTGCTACACCAGCCTCCCAAGCCTCCCAGTGCACC...AAAGACAGGAGCCACATCTTGAGAGATAGATGGCAGATCTGCCCCTGTGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS-3UTR CAA 90 bp GGAGAGATCAAGGCCACCTGCTGGGACAAGCAGCAACTGACCGCCTTGCAGCCAAACTGGGTTGGAACATaGCAGCCCAGGAAAGTGATC +
Preference number: 5 (lower is better)
Translates to: GEIKATCWDKQQLTALQPNWVGT*QPRKVI
Trigger: GATCACTTTCCTGGGCTGCAATGTTCCAACCCAGTT...TGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCCAGCAGGTGGCCTTGATCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS CCA 90 bp ATGATCAGCCCACTGAGGAAGAGGAAGTTGGTGTCGAGGAAGTACTaGGGGCAGACCTTGTTGGAGGGCAAGATGCCCATGAAGGGGAAG +
Preference number: 5 (lower is better)
Translates to: MISPLRKRKLVSRKY*GQTLLEGKMPMKGK
Trigger: CTTCCCCTTCATGGGCATCTTGCCCTCCAACAAGGTCTGCCCCCAGTACTTCCTCGACACCAACTTCCTCTTCCTCAGTGGGCTGATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000372121.5
ENST00000413164.6
ENST00000417157.2
ENST00000420568.5
ENST00000468915.5
ENST00000472148.5
ENST00000495082.5
CDS CCA 90 bp GGCCGTTTCTCCGCACAGCAGCTGTGTTCTCTTCACTCTCCTGGCTaGGGTCCTTTCGAACCTCCTTCTGGCCAAAGAGACTTTTCAGGA +
Preference number: 5 (lower is better)
Translates to: GRFSAQQLCSLHSPG*GPFEPPSGQRDFSG
Trigger: TCCTGAAAAGTCTCTTTGGCCAGAAGGAGGTTCGAAAGGACCCCAGCCAGGAGAGTGAAGAGAACACAGCTGCTGTGCGGAGAAACGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000468915.5
ENST00000472148.5
ENST00000495082.5
CDS-3UTR CAA 90 bp ATTCACTTATGCTGTATCAACAACAAGTGCAGCTGGGCGCTGCCTTCCCAGCTGTGGGGGCAGACCTTGTaGGAGGGCAAGATGCCCATG +
Preference number: 5 (lower is better)
Translates to: IHLCCINNKCSWALPSQLWGQTL*EGKMPM
Trigger: CATGGGCATCTTGCCCTCCAACAAGGTCTGCCCCCA...CAGCTGGGAAGGCAGCGCCCAGCTGCACTTGTTGTTGATACAGCATAAGTGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp ATGGCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTACAAGCATCAGGATCTaGAGGGCGATTCGCCGGTGC +
Preference number: 5 (lower is better)
Translates to: MAHGLEWATGGHPCLLHITSIRI*RAIRRC
Trigger: GCACCGGCGAATCGCCCTCAAGATCCTGATGCTTGT...AATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CAA 90 bp ACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATATGCAGAAGGGTGCGGAAAGAAACTCTaGAGCTGGCCAAGCAGGATG +
Preference number: 5 (lower is better)
Translates to: TSSLGLTGTSQFYPYAEGCGKKL*SWPSRM
Trigger: CATCCTGCTTGGCCAGCTCAAGAGTTTCTTTCCGCA...CCCTTCTGCATATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp ACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATATGCAGAAGGGGTCCGAAATGTGTCATaGGCCAAGGTGGGTGGCAAT +
Preference number: 5 (lower is better)
Translates to: TSSLGLTGTSQFYPYAEGVRNVS*AKVGGN
Trigger: ATTGCCACCCACCTTGGCCAATGACACATTTCGGAC...CCCTTCTGCATATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp TGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCAGCCTCGATGGTGACAGCCCTTaGAGAGGGTTCAGCCTCAAG +
Preference number: 5 (lower is better)
Translates to: CSVLAAGDGDSPLRGFSLDGDSP*RGFSLK
Trigger: CTTGAGGCTGAACCCTCTCAAAGGGCTGTCACCATC...GAGGCTGAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CAA 90 bp AAGGCCACCTGCTGGGACAAGCAGCAACTGACCGCCTTGCAGCCACAGAGGCCTAACACCATGCCAGATTaGCTCACTGTTGATGACACT +
Preference number: 5 (lower is better)
Translates to: KATCWDKQQLTALQPQRPNTMPD*LTVDDT
Trigger: AGTGTCATCAACAGTGAGCAAATCTGGCATGGTGTT...AGGCCTCTGTGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCCAGCAGGTGGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp GGCAGACACCACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATAAACTGGGTTGGAACATaGCAGCCCAGGAAAGTGATC +
Preference number: 5 (lower is better)
Translates to: GRHHFQPRAHGDVSVLPINWVGT*QPRKVI
Trigger: GATCACTTTCCTGGGCTGCAATGTTCCAACCCAGTT...TATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGTGGTGTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS GCA 90 bp CCTGAAGCTCAGTCCCCCGTACAGGAAGGAGATCCAGAGCCAGCCTaGCAACAGGAACAACAGCATAAGAGGGAAGGCGAAAATGAACCA +
Preference number: 5 (lower is better)
Translates to: PEAQSPVQEGDPEPA*QQEQQHKREGENEP
Trigger: TGGTTCATTTTCGCCTTCCCTCTTATGCTGTTGTTCCTGTTGGCAGGCTGGCTCTGGATCTCCTTCCTGTACGGGGGACTGAGCTTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000450298.5
ENST00000468915.5
ENST00000472148.5
ENST00000495082.5
CDS GCA 90 bp GACTCAGAGGGTCCGAAATGTGTCATTGGCCAAGGTGGGTGGCAATaGTGTGACATTGACCGAGTACATATCAGCCCAGTCCGGGAAGGT +
Preference number: 5 (lower is better)
Translates to: DSEGPKCVIGQGGWQ*CDIDRVHISPVREG
Trigger: ACCTTCCCGGACTGGGCTGATATGTACTCGGTCAATGTCACAGCATTGCCACCCACCTTGGCCAATGACACATTTCGGACCCTCTGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
ENST00000495082.5
CDS GCA 90 bp TGCCATCTATCTCTCAAGATGTGGCTCCTGTCTTTGGGTCCCAGGTaGCATCATATTCACATTCCACCCGGCAGGAAGGACAGAACCCGG +
Preference number: 5 (lower is better)
Translates to: CHLSLKMWLLSLGPR*HHIHIPPGRKDRTR
Trigger: CCGGGTTCTGTCCTTCCTGCCGGGTGGAATGTGAATATGATGGCACCTGGGACCCAAAGACAGGAGCCACATCTTGAGAGATAGATGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS CCA 90 bp TGGGGTCCTTTCGAACCTCCTTCTGGCCAAAGAGACTTTTCAGGATaGCATTGGCAATGGGAAGCATCATGGCAGTGGAGGCGGTGTTGC +
Preference number: 5 (lower is better)
Translates to: WGPFEPPSGQRDFSG*HWQWEASWQWRRCC
Trigger: GCAACACCGCCTCCACTGCCATGATGCTTCCCATTGCCAATGCCATCCTGAAAAGTCTCTTTGGCCAGAAGGAGGTTCGAAAGGACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000372121.5
ENST00000413164.6
ENST00000417157.2
ENST00000420568.5
ENST00000468915.5
ENST00000472148.5
ENST00000495082.5
CDS CCA 90 bp AGGGGCAGATCTGCCATCTATCTCTCAAGATGTGGCTCCTGTCTTTaGGTCCCAGGTGCCATCATATTCACATTCCACCCGGCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: RGRSAIYLSRCGSCL*VPGAIIFTFHPAGR
Trigger: CCTTCCTGCCGGGTGGAATGTGAATATGATGGCACCTGGGACCCAAAGACAGGAGCCACATCTTGAGAGATAGATGGCAGATCTGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS-3UTR CAA 90 bp TCTTCACTGGGATGCCAGAATGCTTCTGCTTGGAACAAAGAGGGATTAACCCTTGGTGCACTGGGAGGCTaGGGAGGCTGGTGTAGCAGG +
Preference number: 5 (lower is better)
Translates to: SSLGCQNASAWNKEGLTLGALGG*GGWCSR
Trigger: CCTGCTACACCAGCCTCCCAAGCCTCCCAGTGCACC...AAGGGTTAATCCCTCTTTGTTCCAAGCAGAAGCATTCTGGCATCCCAGTGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp TGCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGAGCCTGTTCGGCAAACTaGATGGGCCCCAGGTTCTGG +
Preference number: 5 (lower is better)
Translates to: CTVSCPWKAICPFPCLQGACSAN*MGPRFW
Trigger: CCAGAACCTGGGGCCCATCAAGTTTGCCGAACAGGC...TCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
CDS-3UTR CAA 90 bp GCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGACTTGAGAGAGGGCCTTaGGGACGGGAAGAAGAACAA +
Preference number: 5 (lower is better)
Translates to: AHGLEWATGGHPCLLHIGLERGP*GREEEQ
Trigger: TTGTTCTTCTTCCCGTCCCAAAGGCCCTCTCTCAAG...TCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CAA 90 bp GCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGAAAGTCAAACCACCACTaGAGAGAGGGCCTTTGGGAC +
Preference number: 5 (lower is better)
Translates to: AHGLEWATGGHPCLLHIGKSNHH*REGLWD
Trigger: GTCCCAAAGGCCCTCTCTCAAGTGGTGGTTTGACTT...TCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CAA 90 bp GTTAGCTGTGCCCATGGGAATGAATGGCCTCCTATCCCAACTGTACGAGACAAAGATTCCTCACAGCCTTaGGCCATGGCGAAGCCCCCT +
Preference number: 5 (lower is better)
Translates to: VSCAHGNEWPPIPTVRDKDSSQP*AMAKPP
Trigger: AGGGGGCTTCGCCATGGCCAAAGGCTGTGAGGAATC...TTTGTCTCGTACAGTTGGGATAGGAGGCCATTCATTCCCATGGGCACAGCTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp TTGTTTTGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCGATTCCTCACAGCCTTaGGCCATGGCGAAGCCCCCT +
Preference number: 5 (lower is better)
Translates to: LFCSVLAAGDGDSPLRGFDSSQP*AMAKPP
Trigger: AGGGGGCTTCGCCATGGCCAAAGGCTGTGAGGAATC...GAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACAAAACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CAA 90 bp GCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGAATGATGGTCGCCGTGTaGCTGGCAAACTCAGTGAAG +
Preference number: 5 (lower is better)
Translates to: AHGLEWATGGHPCLLHIGMMVAV*LANSVK
Trigger: CTTCACTGAGTTTGCCAGCAACACGGCGACCATCAT...TCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CAA 90 bp TGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCAGCCTCGTCCGAAATGTGTCATaGGCCAAGGTGGGTGGCAAT +
Preference number: 5 (lower is better)
Translates to: CSVLAAGDGDSPLRGFSLVRNVS*AKVGGN
Trigger: ATTGCCACCCACCTTGGCCAATGACACATTTCGGAC...GAGGCTGAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CAA 90 bp ATGGCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGATGGTGACAGCCCTTaGAGAGGGTTCAGCCTCAAG +
Preference number: 5 (lower is better)
Translates to: MAHGLEWATGGHPCLLHIDGDSP*RGFSLK
Trigger: CTTGAGGCTGAACCCTCTCAAAGGGCTGTCACCATC...AATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CAA 90 bp GGAGAGATCAAGGCCACCTGCTGGGACAAGCAGCAACTGACCGCCTTGCAGCCAGGGACAATCTTTTGCTaGCCTGAGACATTTTACCCT +
Preference number: 5 (lower is better)
Translates to: GEIKATCWDKQQLTALQPGTIFC*PETFYP
Trigger: AGGGTAAAATGTCTCAGGCAAGCAAAAGATTGTCCC...TGGCTGCAAGGCGGTCAGTTGCTGCTTGTCCCAGCAGGTGGCCTTGATCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp CTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGATGCGCTCCACACCTTCTaGGCCGCTGCTGCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: LRDTWALNCMKERESILDALHTF*AAAASA
Trigger: GGCGCTGGCAGCAGCGGCCAAGAAGGTGTGGAGCGC...ATCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000413164.6
CDS CCA 90 bp GTGTTGGGAGCTTTGAAGTCAAACCACCACTTGAGAGAGGGCCTTTaGGACGGGAAGAAGAACAAGATGGTGACAATAGCCACGCCGGTG +
Preference number: 5 (lower is better)
Translates to: VLGALKSNHHLREGL*DGKKNKMVTIATPV
Trigger: CACCGGCGTGGCTATTGTCACCATCTTGTTCTTCTTCCCGTCCCAAAGGCCCTCTCTCAAGTGGTGGTTTGACTTCAAAGCTCCCAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000468915.5
ENST00000472148.5
ENST00000495082.5
CDS-3UTR CAA 90 bp TGTCTTTTCCAATACTGGGCTAATGCTGGGCCATTCCATTCAGCAGACACTTCCTGGGGGCAGACCTTGTaGGAGGGCAAGATGCCCATG +
Preference number: 5 (lower is better)
Translates to: CLFQYWANAGPFHSADTSWGQTL*EGKMPM
Trigger: CATGGGCATCTTGCCCTCCAACAAGGTCTGCCCCCA...GGAAGTGTCTGCTGAATGGAATGGCCCAGCATTAGCCCAGTATTGGAAAAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp CTGCCATCTATCTCTCAAGATGTGGCTCCTGTCTTTGGGTCCCAGGTGCCATCACTGAGGAAGAGGAAGTaGGTGTCGAGGAAGTACTGG +
Preference number: 5 (lower is better)
Translates to: LPSISQDVAPVFGSQVPSLRKRK*VSRKYW
Trigger: CCAGTACTTCCTCGACACCAACTTCCTCTTCCTCAG...TGATGGCACCTGGGACCCAAAGACAGGAGCCACATCTTGAGAGATAGATGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS-3UTR CAA 90 bp AAAGCCACAGGGGCAGATCTGCCATCTATCTCTCAAGATGTGGCTCCTGTCTTTACAAGCATCAGGATCTaGAGGGCGATTCGCCGGTGC +
Preference number: 5 (lower is better)
Translates to: KATGADLPSISQDVAPVFTSIRI*RAIRRC
Trigger: GCACCGGCGAATCGCCCTCAAGATCCTGATGCTTGT...AAAGACAGGAGCCACATCTTGAGAGATAGATGGCAGATCTGCCCCTGTGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS-3UTR CAA 90 bp TGTCTTTTCCAATACTGGGCTAATGCTGGGCCATTCCATTCAGCAGACACTTCCTCCCCAGGGTGGTCTTaGGCTTCTGTGCTGGCGAGA +
Preference number: 5 (lower is better)
Translates to: CLFQYWANAGPFHSADTSSPGWS*ASVLAR
Trigger: TCTCGCCAGCACAGAAGCCAAAGACCACCCTGGGGA...GGAAGTGTCTGCTGAATGGAATGGCCCAGCATTAGCCCAGTATTGGAAAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp GCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGAGGCTCTGTCTCTGTGTaGGGAGCTTTGAAGTCAAAC +
Preference number: 5 (lower is better)
Translates to: AHGLEWATGGHPCLLHIGGSVSV*GALKSN
Trigger: GTTTGACTTCAAAGCTCCCAACACAGAGACAGAGCC...TCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CAA 90 bp GTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATGATTCCTCACAGCCTTaGGCCATGGCGAAGCCCCCT +
Preference number: 5 (lower is better)
Translates to: VGHWRSPLLAAYWITEKNDSSQP*AMAKPP
Trigger: AGGGGGCTTCGCCATGGCCAAAGGCTGTGAGGAATC...ATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CAA 90 bp TGTCTTTTCCAATACTGGGCTAATGCTGGGCCATTCCATTCAGCAGACACTTCCGATTCCTCACAGCCTTaGGCCATGGCGAAGCCCCCT +
Preference number: 5 (lower is better)
Translates to: CLFQYWANAGPFHSADTSDSSQP*AMAKPP
Trigger: AGGGGGCTTCGCCATGGCCAAAGGCTGTGAGGAATC...GGAAGTGTCTGCTGAATGGAATGGCCCAGCATTAGCCCAGTATTGGAAAAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp ATTCACTTATGCTGTATCAACAACAAGTGCAGCTGGGCGCTGCCTTCCCAGCTGGTCCGCACCATGTCTTaGACCAGCAAGTGTCCAGAG +
Preference number: 5 (lower is better)
Translates to: IHLCCINNKCSWALPSQLVRTMS*TSKCPE
Trigger: CTCTGGACACTTGCTGGTCAAAGACATGGTGCGGAC...CAGCTGGGAAGGCAGCGCCCAGCTGCACTTGTTGTTGATACAGCATAAGTGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp ACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATATGCAGAAGGGCAGATTTGCTCACTGTaGATGACACTGGGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: TSSLGLTGTSQFYPYAEGQICSL*MTLGCL
Trigger: AAGACAGCCCAGTGTCATCAACAGTGAGCAAATCTG...CCCTTCTGCATATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp ACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATATGCAGAAGGGCACAGTCTCATGTCCTaGGAAAGCTATCTGTCCCTT +
Preference number: 5 (lower is better)
Translates to: TSSLGLTGTSQFYPYAEGHSLMS*ESYLSL
Trigger: AAGGGACAGATAGCTTTCCAAGGACATGAGACTGTG...CCCTTCTGCATATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp TGTCTTTTCCAATACTGGGCTAATGCTGGGCCATTCCATTCAGCAGACACTTCCACAAGCATCAGGATCTaGAGGGCGATTCGCCGGTGC +
Preference number: 5 (lower is better)
Translates to: CLFQYWANAGPFHSADTSTSIRI*RAIRRC
Trigger: GCACCGGCGAATCGCCCTCAAGATCCTGATGCTTGT...GGAAGTGTCTGCTGAATGGAATGGCCCAGCATTAGCCCAGTATTGGAAAAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp TCACTGGGGGATAATGTTAGCTGTGCCCATGGGAATGAATGGCCTCCTATCCCAATGATGGTCGCCGTGTaGCTGGCAAACTCAGTGAAG +
Preference number: 5 (lower is better)
Translates to: SLGDNVSCAHGNEWPPIPMMVAV*LANSVK
Trigger: CTTCACTGAGTTTGCCAGCAACACGGCGACCATCAT...TGGGATAGGAGGCCATTCATTCCCATGGGCACAGCTAACATTATCCCCCAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp CATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTAATGATGGTCGCCGTGTaGCTGGCAAACTCAGTGAAG +
Preference number: 5 (lower is better)
Translates to: HGLEWATGGHPCLLHIGLMMVAV*LANSVK
Trigger: CTTCACTGAGTTTGCCAGCAACACGGCGACCATCAT...TAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CAA 90 bp ATGGCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTCACTGGAGGTCACCCTaGCTTGCTGCATATTGGATT +
Preference number: 5 (lower is better)
Translates to: MAHGLEWATGGHPCLLHIHWRSP*LAAYWI
Trigger: AATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTG...AATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CAA 90 bp GCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGACAGATTTGCTCACTGTaGATGACACTGGGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: AHGLEWATGGHPCLLHIGQICSL*MTLGCL
Trigger: AAGACAGCCCAGTGTCATCAACAGTGAGCAAATCTG...TCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CAA 90 bp AATCAGAGAGGTCAACTCTGTGGAATCCCCAGCCCAGGAATTTGGGGCTTTGAAGCTGGAACAACTGGGTaGGAACATTGCAGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: NQRGQLCGIPSPGIWGFEAGTTG*EHCSPG
Trigger: TCCTGGGCTGCAATGTTCCAACCCAGTTGTTCCAGC...TTCAAAGCCCCAAATTCCTGGGCTGGGGATTCCACAGAGTTGACCTCTCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
CDS-3UTR CAA 90 bp GCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGAAGAATCCTAAATCTCTaGGGTCGAGATGTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: AHGLEWATGGHPCLLHIGRILNL*GRDVSC
Trigger: GCAGCTGACATCTCGACCCAAGAGATTTAGGATTCT...TCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp GGAACATTGCAGCCCAGGAAAGTGATCTTTAAAGACAAGGTGGTCTCTTCAGTGCAGCAACTGACCGCCTaGCAGCCACAGAGGCCTATG +
Preference number: 5 (lower is better)
Translates to: GTLQPRKVIFKDKVVSSVQQLTA*QPQRPM
Trigger: CATAGGCCTCTGTGGCTGCAAGGCGGTCAGTTGCTG...CACTGAAGAGACCACCTTGTCTTTAAAGATCACTTTCCTGGGCTGCAATGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp TGCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGACTGAGGAAGAGGAAGTaGGTGTCGAGGAAGTACTGG +
Preference number: 5 (lower is better)
Translates to: CTVSCPWKAICPFPCLQGLRKRK*VSRKYW
Trigger: CCAGTACTTCCTCGACACCAACTTCCTCTTCCTCAG...TCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp TTGTTTTGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCCTTGAGAGAGGGCCTTaGGGACGGGAAGAAGAACAA +
Preference number: 5 (lower is better)
Translates to: LFCSVLAAGDGDSPLRGFLERGP*GREEEQ
Trigger: TTGTTCTTCTTCCCGTCCCAAAGGCCCTCTCTCAAG...GAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACAAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CAA 90 bp ATGGCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTTCTGTGTTGGGAGCTTaGAAGTCAAACCACCACTTG +
Preference number: 5 (lower is better)
Translates to: MAHGLEWATGGHPCLLHISVLGA*KSNHHL
Trigger: CAAGTGGTGGTTTGACTTCAAAGCTCCCAACACAGA...AATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CAA 90 bp TGCTGGTTATCGGCAGGGGTAAAACAACTGGTGCAGAATGGGCACCAACTAAGCGGCTCTGTCTCTGTGTaGGGAGCTTTGAAGTCAAAC +
Preference number: 5 (lower is better)
Translates to: CWLSAGVKQLVQNGHQLSGSVSV*GALKSN
Trigger: GTTTGACTTCAAAGCTCCCAACACAGAGACAGAGCC...GCTTAGTTGGTGCCCATTCTGCACCAGTTGTTTTACCCCTGCCGATAACCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp ATGATTCACTTATGCTGTATCAACAACAAGTGCAGCTGGGCGCTGCCTTCCCAGATGATGGTCGCCGTGTaGCTGGCAAACTCAGTGAAG +
Preference number: 5 (lower is better)
Translates to: MIHLCCINNKCSWALPSQMMVAV*LANSVK
Trigger: CTTCACTGAGTTTGCCAGCAACACGGCGACCATCAT...CTGGGAAGGCAGCGCCCAGCTGCACTTGTTGTTGATACAGCATAAGTGAATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp TCACTGGGGGATAATGTTAGCTGTGCCCATGGGAATGAATGGCCTCCTATCCCAGGAGGTCACCCTTGCTaGCTGCATATTGGATTACAG +
Preference number: 5 (lower is better)
Translates to: SLGDNVSCAHGNEWPPIPGGHPC*LHIGLQ
Trigger: CTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCC...TGGGATAGGAGGCCATTCATTCCCATGGGCACAGCTAACATTATCCCCCAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp GCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGAAACACCATGCCAGATTaGCTCACTGTTGATGACACT +
Preference number: 5 (lower is better)
Translates to: AHGLEWATGGHPCLLHIGNTMPD*LTVDDT
Trigger: AGTGTCATCAACAGTGAGCAAATCTGGCATGGTGTT...TCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp TGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCAGCCTCGGGACAATCTTTTGCTaGCCTGAGACATTTTACCCT +
Preference number: 5 (lower is better)
Translates to: CSVLAAGDGDSPLRGFSLGTIFC*PETFYP
Trigger: AGGGTAAAATGTCTCAGGCAAGCAAAAGATTGTCCC...GAGGCTGAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp GCCATCTATCTCTCAAGATGTGGCTCCTGTCTTTGGGTCCCAGGTGCCATCATAGACAGAACCCGGAAGTaGCACACATCATTTCCACTC +
Preference number: 5 (lower is better)
Translates to: AIYLSRCGSCLWVPGAIIDRTRK*HTSFPL
Trigger: GAGTGGAAATGATGTGTGCAACTTCCGGGTTCTGTC...TATGATGGCACCTGGGACCCAAAGACAGGAGCCACATCTTGAGAGATAGATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS-3UTR CAA 90 bp GTTAGCTGTGCCCATGGGAATGAATGGCCTCCTATCCCAACTGTACGAGACAAAGCATCAGAAAGAAACTaGATGGGCCCCAGGTTCTGG +
Preference number: 5 (lower is better)
Translates to: VSCAHGNEWPPIPTVRDKASERN*MGPRFW
Trigger: CCAGAACCTGGGGCCCATCAAGTTTCTTTCTGATGC...TTTGTCTCGTACAGTTGGGATAGGAGGCCATTCATTCCCATGGGCACAGCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472148.5
CDS CCA 90 bp CAAGGGGAGCTTGAAGTTTCAGCCTTTCCTCAGAGAGGAAAGTATTaGGTTCTATTCCTGTGTTCTCTTCACTCTCCTGGCTGGGGTCCT +
Preference number: 5 (lower is better)
Translates to: QGELEVSAFPQRGKY*VLFLCSLHSPGWGP
Trigger: AGGACCCCAGCCAGGAGAGTGAAGAGAACACAGGAATAGAACCCAATACTTTCCTCTCTGAGGAAAGGCTGAAACTTCAAGCTCCCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS-3UTR CAA 90 bp TGTCTTTTCCAATACTGGGCTAATGCTGGGCCATTCCATTCAGCAGACACTTCCTGCGGAAAGAAACTCTaGAGCTGGCCAAGCAGGATG +
Preference number: 5 (lower is better)
Translates to: CLFQYWANAGPFHSADTSCGKKL*SWPSRM
Trigger: CATCCTGCTTGGCCAGCTCAAGAGTTTCTTTCCGCA...GGAAGTGTCTGCTGAATGGAATGGCCCAGCATTAGCCCAGTATTGGAAAAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp ATTCACTTATGCTGTATCAACAACAAGTGCAGCTGGGCGCTGCCTTCCCAGCTGTCTGTGTTGGGAGCTTaGAAGTCAAACCACCACTTG +
Preference number: 5 (lower is better)
Translates to: IHLCCINNKCSWALPSQLSVLGA*KSNHHL
Trigger: CAAGTGGTGGTTTGACTTCAAAGCTCCCAACACAGA...CAGCTGGGAAGGCAGCGCCCAGCTGCACTTGTTGTTGATACAGCATAAGTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp TGCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGAGGCTCTGTCTCTGTGTaGGGAGCTTTGAAGTCAAAC +
Preference number: 5 (lower is better)
Translates to: CTVSCPWKAICPFPCLQGGSVSV*GALKSN
Trigger: GTTTGACTTCAAAGCTCCCAACACAGAGACAGAGCC...TCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp GGAACATTGCAGCCCAGGAAAGTGATCTTTAAAGACAAGGTGGTCTCTTCAGTGGATGGTGACAGCCCTTaGAGAGGGTTCAGCCTCAAG +
Preference number: 5 (lower is better)
Translates to: GTLQPRKVIFKDKVVSSVDGDSP*RGFSLK
Trigger: CTTGAGGCTGAACCCTCTCAAAGGGCTGTCACCATC...CACTGAAGAGACCACCTTGTCTTTAAAGATCACTTTCCTGGGCTGCAATGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp ATGATTCACTTATGCTGTATCAACAACAAGTGCAGCTGGGCGCTGCCTTCCCAGCACTGGAGGTCACCCTaGCTTGCTGCATATTGGATT +
Preference number: 5 (lower is better)
Translates to: MIHLCCINNKCSWALPSQHWRSP*LAAYWI
Trigger: AATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTG...CTGGGAAGGCAGCGCCCAGCTGCACTTGTTGTTGATACAGCATAAGTGAATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp CATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGATTTGCTCACTGTaGATGACACTGGGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: HGLEWATGGHPCLLHIGLQICSL*MTLGCL
Trigger: AAGACAGCCCAGTGTCATCAACAGTGAGCAAATCTG...TAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CAA 90 bp ACTTCCAGCCTCGGGCTCACGGGGACGTCTCAGTTTTACCCATATGCAGAAGGGGAAGAGATGGCTTTCTaGTTAATTCTGGAGCAGATT +
Preference number: 5 (lower is better)
Translates to: TSSLGLTGTSQFYPYAEGEEMAF*LILEQI
Trigger: AATCTGCTCCAGAATTAACAAGAAAGCCATCTCTTC...CCCTTCTGCATATGGGTAAAACTGAGACGTCCCCGTGAGCCCGAGGCTGGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
CDS CCA 90 bp ATGAGCAGGATGACAAACAAGCAGCGGCCTTCAGTTCAGCATGGCTaGGGATGCCTCAGAAAACTTATAATCATGGCAGATGGGGAAACA +
Preference number: 5 (lower is better)
Translates to: MSRMTNKQRPSVQHG*GCLRKLIIMADGET
Trigger: TGTTTCCCCATCTGCCATGATTATAAGTTTTCTGAGGCATCCCCAGCCATGCTGAACTGAAGGCCGCTGCTTGTTTGTCATCCTGCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372121.5
CDS CCA 90 bp GGAAAGTATTGGGTTCTATTCCTGTGTTCTCTTCACTCTCCTGGCTaGGGTCCTTTCGAACCTCCTTCTGGCCAAAGAGACTTTTCAGGA +
Preference number: 5 (lower is better)
Translates to: GKYWVLFLCSLHSPG*GPFEPPSGQRDFSG
Trigger: TCCTGAAAAGTCTCTTTGGCCAGAAGGAGGTTCGAAAGGACCCCAGCCAGGAGAGTGAAGAGAACACAGGAATAGAACCCAATACTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS-3UTR CAA 90 bp TGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATTTGCGGAAAGAAACTCTaGAGCTGGCCAAGCAGGATG +
Preference number: 5 (lower is better)
Translates to: WATGGHPCLLHIGLQKRICGKKL*SWPSRM
Trigger: CATCCTGCTTGGCCAGCTCAAGAGTTTCTTTCCGCA...AATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp TCTTCACTGGGATGCCAGAATGCTTCTGCTTGGAACAAAGAGGGATTAACCCTTCTTGAGAGAGGGCCTTaGGGACGGGAAGAAGAACAA +
Preference number: 5 (lower is better)
Translates to: SSLGCQNASAWNKEGLTLLERGP*GREEEQ
Trigger: TTGTTCTTCTTCCCGTCCCAAAGGCCCTCTCTCAAG...AAGGGTTAATCCCTCTTTGTTCCAAGCAGAAGCATTCTGGCATCCCAGTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp GGAACATTGCAGCCCAGGAAAGTGATCTTTAAAGACAAGGTGGTCTCTTCAGTGAAGTCAAACCACCACTaGAGAGAGGGCCTTTGGGAC +
Preference number: 5 (lower is better)
Translates to: GTLQPRKVIFKDKVVSSVKSNHH*REGLWD
Trigger: GTCCCAAAGGCCCTCTCTCAAGTGGTGGTTTGACTT...CACTGAAGAGACCACCTTGTCTTTAAAGATCACTTTCCTGGGCTGCAATGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp GCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGATTCTGTGTTGGGAGCTTaGAAGTCAAACCACCACTTG +
Preference number: 5 (lower is better)
Translates to: AQSHVLGKLSVPFPVSKDSVLGA*KSNHHL
Trigger: CAAGTGGTGGTTTGACTTCAAAGCTCCCAACACAGA...ATCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp GTTAGCTGTGCCCATGGGAATGAATGGCCTCCTATCCCAACTGTACGAGACAAATCTGTGTTGGGAGCTTaGAAGTCAAACCACCACTTG +
Preference number: 5 (lower is better)
Translates to: VSCAHGNEWPPIPTVRDKSVLGA*KSNHHL
Trigger: CAAGTGGTGGTTTGACTTCAAAGCTCCCAACACAGA...TTTGTCTCGTACAGTTGGGATAGGAGGCCATTCATTCCCATGGGCACAGCTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp TGTCTTTTCCAATACTGGGCTAATGCTGGGCCATTCCATTCAGCAGACACTTCCCACTGGAGGTCACCCTaGCTTGCTGCATATTGGATT +
Preference number: 5 (lower is better)
Translates to: CLFQYWANAGPFHSADTSHWRSP*LAAYWI
Trigger: AATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTG...GGAAGTGTCTGCTGAATGGAATGGCCCAGCATTAGCCCAGTATTGGAAAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp TGCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGACACAGTCTCATGTCCTaGGAAAGCTATCTGTCCCTT +
Preference number: 5 (lower is better)
Translates to: CTVSCPWKAICPFPCLQGHSLMS*ESYLSL
Trigger: AAGGGACAGATAGCTTTCCAAGGACATGAGACTGTG...TCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp GTTAGCTGTGCCCATGGGAATGAATGGCCTCCTATCCCAACTGTACGAGACAAAAGAATCCTAAATCTCTaGGGTCGAGATGTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: VSCAHGNEWPPIPTVRDKRILNL*GRDVSC
Trigger: GCAGCTGACATCTCGACCCAAGAGATTTAGGATTCT...TTTGTCTCGTACAGTTGGGATAGGAGGCCATTCATTCCCATGGGCACAGCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp GCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGATAGAATCCTAAATCTCTaGGGTCGAGATGTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: AQSHVLGKLSVPFPVSKDRILNL*GRDVSC
Trigger: GCAGCTGACATCTCGACCCAAGAGATTTAGGATTCT...ATCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp TCACTGGGGGATAATGTTAGCTGTGCCCATGGGAATGAATGGCCTCCTATCCCAGGGACAATCTTTTGCTaGCCTGAGACATTTTACCCT +
Preference number: 5 (lower is better)
Translates to: SLGDNVSCAHGNEWPPIPGTIFC*PETFYP
Trigger: AGGGTAAAATGTCTCAGGCAAGCAAAAGATTGTCCC...TGGGATAGGAGGCCATTCATTCCCATGGGCACAGCTAACATTATCCCCCAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp GCTCATGGACTTGAGTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGAGAAGAGATGGCTTTCTaGTTAATTCTGGAGCAGATT +
Preference number: 5 (lower is better)
Translates to: AHGLEWATGGHPCLLHIGEEMAF*LILEQI
Trigger: AATCTGCTCCAGAATTAACAAGAAAGCCATCTCTTC...TCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCACTCAAGTCCATGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
CDS-3UTR CAA 90 bp ATCAGAAGTCTTAGAAATCATGATTCATCTGGTTACAAATCCCATGAGTTTCTCAAGCAGCGGCCTTCCTaGGGCGGGAGGGCGAAGACC +
Preference number: 5 (lower is better)
Translates to: IRSLRNHDSSGYKSHEFLKQRPS*GGRAKT
Trigger: GGTCTTCGCCCTCCCGCCCAAGGAAGGCCGCTGCTT...GAGAAACTCATGGGATTTGTAACCAGATGAATCATGATTTCTAAGACTTCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279027.9
CDS-3UTR CAA 90 bp GATGACACTGGGCTGTCTTGTATCCTAATGATAAAACAGCTAACTGATAAAGGAGCCTGTTCGGCAAACTaGATGGGCCCCAGGTTCTGG +
Preference number: 5 (lower is better)
Translates to: DDTGLSCILMIKQLTDKGACSAN*MGPRFW
Trigger: CCAGAACCTGGGGCCCATCAAGTTTGCCGAACAGGC...TCCTTTATCAGTTAGCTGTTTTATCATTAGGATACAAGACAGCCCAGTGTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
CDS-3UTR CAA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGGCCTGTTCGGCAAACTaGATGGGCCCCAGGTTCTGG +
Preference number: 5 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMACSAN*MGPRFW
Trigger: CCAGAACCTGGGGCCCATCAAGTTTGCCGAACAGGC...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR CAA 90 bp GCACAGTCTCATGTCCTTGGAAAGCTATCTGTCCCTTTCCCTGTCTCCAAGGATAGAGATACCTGGGCTTaGAACTGCATGAAAGAGAGA +
Preference number: 5 (lower is better)
Translates to: AQSHVLGKLSVPFPVSKDRDTWA*NCMKER
Trigger: TCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCT...ATCCTTGGAGACAGGGAAAGGGACAGATAGCTTTCCAAGGACATGAGACTGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp AATCAGAGAGGTCAACTCTGTGGAATCCCCAGCCCAGGAATTTGGGGCTTTGAAAGAGATACCTGGGCTTaGAACTGCATGAAAGAGAGA +
Preference number: 5 (lower is better)
Translates to: NQRGQLCGIPSPGIWGFERDTWA*NCMKER
Trigger: TCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCT...TTCAAAGCCCCAAATTCCTGGGCTGGGGATTCCACAGAGTTGACCTCTCTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000290317.9
CDS-3UTR CAA 90 bp TTGTTTTGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCAGAGATACCTGGGCTTaGAACTGCATGAAAGAGAGA +
Preference number: 5 (lower is better)
Translates to: LFCSVLAAGDGDSPLRGFRDTWA*NCMKER
Trigger: TCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCT...GAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACAAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CAA 90 bp TTGTTTTGTAGTGTCCTAGCAGCAGGTGATGGTGACAGCCCTTTGAGAGGGTTCAACACCATGCCAGATTaGCTCACTGTTGATGACACT +
Preference number: 5 (lower is better)
Translates to: LFCSVLAAGDGDSPLRGFNTMPD*LTVDDT
Trigger: AGTGTCATCAACAGTGAGCAAATCTGGCATGGTGTT...GAACCCTCTCAAAGGGCTGTCACCATCACCTGCTGCTAGGACACTACAAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp TCTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGAGCTGGAACAACTGGGTaGGAACATTGCAGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: SERYLGFELHERERKYPRAGTTG*EHCSPG
Trigger: TCCTGGGCTGCAATGTTCCAACCCAGTTGTTCCAGC...TCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp GATGACACTGGGCTGTCTTGTATCCTAATGATAAAACAGCTAACTGATAAAGGATCCAGAGCCAGCCTCTaGAGCTGGCCAAGCAGGATG +
Preference number: 5 (lower is better)
Translates to: DDTGLSCILMIKQLTDKGSRASL*SWPSRM
Trigger: CATCCTGCTTGGCCAGCTCAAGAGGCTGGCTCTGGA...TCCTTTATCAGTTAGCTGTTTTATCATTAGGATACAAGACAGCCCAGTGTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413164.6
CDS-3UTR CAA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGTCCAGAGCCAGCCTCTaGAGCTGGCCAAGCAGGATG +
Preference number: 5 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMSRASL*SWPSRM
Trigger: CATCCTGCTTGGCCAGCTCAAGAGGCTGGCTCTGGA...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR CAA 90 bp CTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGATCTGAGGAAGAGGAAGTaGGTGTCGAGGAAGTACTGG +
Preference number: 5 (lower is better)
Translates to: LRDTWALNCMKERESILDLRKRK*VSRKYW
Trigger: CCAGTACTTCCTCGACACCAACTTCCTCTTCCTCAG...ATCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CAA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGACAAGCATCAGGATCTaGAGGGCGATTCGCCGGTGC +
Preference number: 5 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMTSIRI*RAIRRC
Trigger: GCACCGGCGAATCGCCCTCAAGATCCTGATGCTTGT...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR CAA 90 bp CTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGATAAGTCAAACCACCACTaGAGAGAGGGCCTTTGGGAC +
Preference number: 5 (lower is better)
Translates to: LRDTWALNCMKERESILDKSNHH*REGLWD
Trigger: GTCCCAAAGGCCCTCTCTCAAGTGGTGGTTTGACTT...ATCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CAA 90 bp GTGGGCCACTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATAGAGATACCTGGGCTTaGAACTGCATGAAAGAGAGA +
Preference number: 5 (lower is better)
Translates to: VGHWRSPLLAAYWITEKNRDTWA*NCMKER
Trigger: TCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCT...ATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAGTGGCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CAA 90 bp GGAACATTGCAGCCCAGGAAAGTGATCTTTAAAGACAAGGTGGTCTCTTCAGTGCAGATTTGCTCACTGTaGATGACACTGGGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: GTLQPRKVIFKDKVVSSVQICSL*MTLGCL
Trigger: AAGACAGCCCAGTGTCATCAACAGTGAGCAAATCTG...CACTGAAGAGACCACCTTGTCTTTAAAGATCACTTTCCTGGGCTGCAATGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp TCTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGATCCCCAGGGTGGTCTTaGCTGTGTTCTCTTCACTCT +
Preference number: 5 (lower is better)
Translates to: SERYLGFELHERERKYPRSPGWS*LCSLHS
Trigger: AGAGTGAAGAGAACACAGCAAAGACCACCCTGGGGA...TCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413164.6
CDS GCA 90 bp CAGGTTCTGGTATTCTTCCCGAATTACAGCTCGAGCCCTATCTTCTaGATTGGTTCTTATCTCAGATTTATTCTTCCTCCAGCCCCTGAA +
Preference number: 5 (lower is better)
Translates to: QVLVFFPNYSSSPIF*IGSYLRFILPPAPE
Trigger: TTCAGGGGCTGGAGGAAGAATAAATCTGAGATAAGAACCAATGCAGAAGATAGGGCTCGAGCTGTAATTCGGGAAGAATACCAGAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000372121.5
ENST00000413164.6
ENST00000420568.5
ENST00000450298.5
ENST00000468915.5
ENST00000472148.5
ENST00000495082.5
CDS-3UTR CAA 90 bp GTTAGCTGTGCCCATGGGAATGAATGGCCTCCTATCCCAACTGTACGAGACAAAGCCCTATCTTCTGCATaGGTTCTTATCTCAGATTTA +
Preference number: 5 (lower is better)
Translates to: VSCAHGNEWPPIPTVRDKALSSA*VLISDL
Trigger: TAAATCTGAGATAAGAACCAATGCAGAAGATAGGGC...TTTGTCTCGTACAGTTGGGATAGGAGGCCATTCATTCCCATGGGCACAGCTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp CTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATTATTTGATGTCCGCACCATGTCTTaGACCAGCAAGTGTCCAGAG +
Preference number: 5 (lower is better)
Translates to: LEVTLACCILDYRKELFDVRTMS*TSKCPE
Trigger: CTCTGGACACTTGCTGGTCAAAGACATGGTGCGGAC...ATCAAATAATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CAA 90 bp CTGAGAGATACCTGGGCTTTGAACTGCATGAAAGAGAGAGAAAGTATCCTAGATAACTGGGTTGGAACATaGCAGCCCAGGAAAGTGATC +
Preference number: 5 (lower is better)
Translates to: LRDTWALNCMKERESILDNWVGT*QPRKVI
Trigger: GATCACTTTCCTGGGCTGCAATGTTCCAACCCAGTT...ATCTAGGATACTTTCTCTCTCTTTCATGCAGTTCAAAGCCCAGGTATCTCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp AACAGCTGGAACAACTGGGTTGGAACATTGCAGCCCAGGAAAGTGATCTTTAAACACAGTCTCATGTCCTaGGAAAGCTATCTGTCCCTT +
Preference number: 5 (lower is better)
Translates to: NSWNNWVGTLQPRKVIFKHSLMS*ESYLSL
Trigger: AAGGGACAGATAGCTTTCCAAGGACATGAGACTGTG...TTTAAAGATCACTTTCCTGGGCTGCAATGTTCCAACCCAGTTGTTCCAGCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGCTGAGGAAGAGGAAGTaGGTGTCGAGGAAGTACTGG +
Preference number: 5 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMLRKRK*VSRKYW
Trigger: CCAGTACTTCCTCGACACCAACTTCCTCTTCCTCAG...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR CAA 90 bp GATGACACTGGGCTGTCTTGTATCCTAATGATAAAACAGCTAACTGATAAAGGAAAGTCAAACCACCACTaGAGAGAGGGCCTTTGGGAC +
Preference number: 5 (lower is better)
Translates to: DDTGLSCILMIKQLTDKGKSNHH*REGLWD
Trigger: GTCCCAAAGGCCCTCTCTCAAGTGGTGGTTTGACTT...TCCTTTATCAGTTAGCTGTTTTATCATTAGGATACAAGACAGCCCAGTGTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CAA 90 bp CTGGAGGTCACCCTTGCTTGCTGCATATTGGATTACAGAAAAGAATTATTTGATGTCCGAAATGTGTCATaGGCCAAGGTGGGTGGCAAT +
Preference number: 5 (lower is better)
Translates to: LEVTLACCILDYRKELFDVRNVS*AKVGGN
Trigger: ATTGCCACCCACCTTGGCCAATGACACATTTCGGAC...ATCAAATAATTCTTTTCTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CAA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGTCCCCAGGGTGGTCTTaGCTGTGTTCTCTTCACTCT +
Preference number: 5 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMSPGWS*LCSLHS
Trigger: AGAGTGAAGAGAACACAGCAAAGACCACCCTGGGGA...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR CAA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGATTTTGCATCCAGGATaGAAGAGGCTGGCCCAGCCA +
Preference number: 5 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMILHPG*KRLAQP
Trigger: TGGCTGGGCCAGCCTCTTCAATCCTGGATGCAAAAT...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR CAA 90 bp ACTGGGCTGTCTTGTATCCTAATGATAAAACAGCTAACTGATAAAGGAGCTTATCTGAGGAAGAGGAAGTaGGTGTCGAGGAAGTACTGG +
Preference number: 5 (lower is better)
Translates to: TGLSCILMIKQLTDKGAYLRKRK*VSRKYW
Trigger: CCAGTACTTCCTCGACACCAACTTCCTCTTCCTCAG...ATAAGCTCCTTTATCAGTTAGCTGTTTTATCATTAGGATACAAGACAGCCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CAA 90 bp TCTTCACTGGGATGCCAGAATGCTTCTGCTTGGAACAAAGAGGGATTAACCCTTGCCCTATCTTCTGCATaGGTTCTTATCTCAGATTTA +
Preference number: 5 (lower is better)
Translates to: SSLGCQNASAWNKEGLTLALSSA*VLISDL
Trigger: TAAATCTGAGATAAGAACCAATGCAGAAGATAGGGC...AAGGGTTAATCCCTCTTTGTTCCAAGCAGAAGCATTCTGGCATCCCAGTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp ACTGGGCTGTCTTGTATCCTAATGATAAAACAGCTAACTGATAAAGGAGCTTATCTTGAGAGAGGGCCTTaGGGACGGGAAGAAGAACAA +
Preference number: 5 (lower is better)
Translates to: TGLSCILMIKQLTDKGAYLERGP*GREEEQ
Trigger: TTGTTCTTCTTCCCGTCCCAAAGGCCCTCTCTCAAG...ATAAGCTCCTTTATCAGTTAGCTGTTTTATCATTAGGATACAAGACAGCCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CAA 90 bp GATGACACTGGGCTGTCTTGTATCCTAATGATAAAACAGCTAACTGATAAAGGAGGAGGTCACCCTTGCTaGCTGCATATTGGATTACAG +
Preference number: 5 (lower is better)
Translates to: DDTGLSCILMIKQLTDKGGGHPC*LHIGLQ
Trigger: CTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCC...TCCTTTATCAGTTAGCTGTTTTATCATTAGGATACAAGACAGCCCAGTGTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CAA 90 bp AACAGCTGGAACAACTGGGTTGGAACATTGCAGCCCAGGAAAGTGATCTTTAAAGCCCTATCTTCTGCATaGGTTCTTATCTCAGATTTA +
Preference number: 5 (lower is better)
Translates to: NSWNNWVGTLQPRKVIFKALSSA*VLISDL
Trigger: TAAATCTGAGATAAGAACCAATGCAGAAGATAGGGC...TTTAAAGATCACTTTCCTGGGCTGCAATGTTCCAACCCAGTTGTTCCAGCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp ACTGGGCTGTCTTGTATCCTAATGATAAAACAGCTAACTGATAAAGGAGCTTATGGCTCTGTCTCTGTGTaGGGAGCTTTGAAGTCAAAC +
Preference number: 5 (lower is better)
Translates to: TGLSCILMIKQLTDKGAYGSVSV*GALKSN
Trigger: GTTTGACTTCAAAGCTCCCAACACAGAGACAGAGCC...ATAAGCTCCTTTATCAGTTAGCTGTTTTATCATTAGGATACAAGACAGCCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CAA 90 bp ATCAGAAGTCTTAGAAATCATGATTCATCTGGTTACAAATCCCATGAGTTTCTCGTCCGAAATGTGTCATaGGCCAAGGTGGGTGGCAAT +
Preference number: 5 (lower is better)
Translates to: IRSLRNHDSSGYKSHEFLVRNVS*AKVGGN
Trigger: ATTGCCACCCACCTTGGCCAATGACACATTTCGGAC...GAGAAACTCATGGGATTTGTAACCAGATGAATCATGATTTCTAAGACTTCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000472148.5
CDS-3UTR CAA 90 bp ACTGGGCTGTCTTGTATCCTAATGATAAAACAGCTAACTGATAAAGGAGCTTATGGAGGTCACCCTTGCTaGCTGCATATTGGATTACAG +
Preference number: 5 (lower is better)
Translates to: TGLSCILMIKQLTDKGAYGGHPC*LHIGLQ
Trigger: CTGTAATCCAATATGCAGCAAGCAAGGGTGACCTCC...ATAAGCTCCTTTATCAGTTAGCTGTTTTATCATTAGGATACAAGACAGCCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CAA 90 bp CCTATGGTTTCATGGATAATGCTTGTTGTGTTCACTGAGGTAAATGATCCAAAGTATCACAAGGGGAGCTaGAAGTTTCAGCCTTTCCTC +
Preference number: 5 (lower is better)
Translates to: PMVSWIMLVVFTEVNDPKYHKGS*KFQPFL
Trigger: GAGGAAAGGCTGAAACTTCAAGCTCCCCTTGTGATA...CTTTGGATCATTTACCTCAGTGAACACAACAAGCATTATCCATGAAACCATAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS-3UTR CAA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGCTTATAATGCCCATTTaGCATCCAGGATTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMLIMPI*HPGLKR
Trigger: CCTCTTCAATCCTGGATGCAAAATGGGCATTATAAG...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS-3UTR CAA 90 bp GATGACACTGGGCTGTCTTGTATCCTAATGATAAAACAGCTAACTGATAAAGGAGCCCTATCTTCTGCATaGGTTCTTATCTCAGATTTA +
Preference number: 5 (lower is better)
Translates to: DDTGLSCILMIKQLTDKGALSSA*VLISDL
Trigger: TAAATCTGAGATAAGAACCAATGCAGAAGATAGGGC...TCCTTTATCAGTTAGCTGTTTTATCATTAGGATACAAGACAGCCCAGTGTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
CDS-3UTR CAA 90 bp AGTTTAACAAGTCTTGACAAATGTATGCAGTCCGATAACAGCGTGATCACAATGGCCCTATCTTCTGCATaGGTTCTTATCTCAGATTTA +
Preference number: 5 (lower is better)
Translates to: SLTSLDKCMQSDNSVITMALSSA*VLISDL
Trigger: TAAATCTGAGATAAGAACCAATGCAGAAGATAGGGC...CATTGTGATCACGCTGTTATCGGACTGCATACATTTGTCAAGACTTGTTAAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420568.5
CDS GCA 72 bp CAGCAGCCGCCGCGCGCTCCACACCTTCTTGGCCGCTaGTGCCAGCGCCGCCATCAGCGCGATCGCCTGGCG +
Preference number: 6 (lower is better)
Translates to: QQPPRAPHLLGR*CQRRHQRDRLA
Trigger: CGCCAGGCGATCGCGCTGATGGCGGCGCTGGCAGCAGCGGCCAAGAAGGTGTGGAGCGCGCGGCGGCTGCTG
75% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000413164.6
CDS GCA 72 bp CAGCCGCCGCGCGCTCCACACCTTCTTGGCCGCTGCTaGCAGCGCCGCCATCAGCGCGATCGCCTGGCGGTA +
Preference number: 6 (lower is better)
Translates to: QPPRAPHLLGRC*QRRHQRDRLAV
Trigger: TACCGCCAGGCGATCGCGCTGATGGCGGCGCTGGCAGCAGCGGCCAAGAAGGTGTGGAGCGCGCGGCGGCTG
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279027.9
ENST00000413164.6
CDS GCA 72 bp CAAACAAGCAGCGGCCTTCCTGCAGGAGGAGATGCATaGTCAGAGGGTCAGCGGGGCTCGGGGCAGAAGGGG +
Preference number: 6 (lower is better)
Translates to: QTSSGLPAGGDA*SEGQRGSGQKG
Trigger: CCCCTTCTGCCCCGAGCCCCGCTGACCCTCTGAGCATGCATCTCCTCCTGCAGGAAGGCCGCTGCTTGTTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495082.5
CDS GCA 72 bp GCCATGAGCAGGATGACAAACAAGCAGCGGCCTTCCTaGAGGAGGAGATGCATGCTCAGAGGGTCAGCGGGG +
Preference number: 6 (lower is better)
Translates to: AMSRMTNKQRPS*RRRCMLRGSAG
Trigger: CCCCGCTGACCCTCTGAGCATGCATCTCCTCCTGCAGGAAGGCCGCTGCTTGTTTGTCATCCTGCTCATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495082.5
CDS CAA 90 bp GCAGCGGCCTTCCTTGCTTGTCTCCTAGAAGGTGCACTGGGAGGCTaGGGAGGCTGGTGTAGCAGGGACCACCCATATGTAGCTTCCTTT +
Preference number: 6 (lower is better)
Translates to: AAAFLACLLEGALGG*GGWCSRDHPYVASF
Trigger: AAAGGAAGCTACATATGGGTGGTCCCTGCTACACCAGCCTCCCAAGCCTCCCAGTGCACCTTCTAGGAGACAAGCAAGGAAGGCCGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290317.9
ENST00000417157.2
ENST00000468915.5
ENST00000472148.5
CDS CAA 90 bp AGGAAGAGGAAGTTGGTGTCGAGGAAGTACTGGGGGCAGACCTTGTaGGAGGGCAAGATGCCCATGAAGGGGAAGAGGACGATGGGCAGC +
Preference number: 6 (lower is better)
Translates to: RKRKLVSRKYWGQTL*EGKMPMKGKRTMGS
Trigger: GCTGCCCATCGTCCTCTTCCCCTTCATGGGCATCTTGCCCTCCAACAAGGTCTGCCCCCAGTACTTCCTCGACACCAACTTCCTCTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000372121.5
ENST00000413164.6
ENST00000417157.2
ENST00000420568.5
ENST00000468915.5
ENST00000472148.5
ENST00000495082.5
CDS CAA 90 bp TCCTCAATGGCGCTGGCCATGATCAGCCCACTGAGGAAGAGGAAGTaGGTGTCGAGGAAGTACTGGGGGCAGACCTTGTTGGAGGGCAAG +
Preference number: 6 (lower is better)
Translates to: SSMALAMISPLRKRK*VSRKYWGQTLLEGK
Trigger: CTTGCCCTCCAACAAGGTCTGCCCCCAGTACTTCCTCGACACCAACTTCCTCTTCCTCAGTGGGCTGATCATGGCCAGCGCCATTGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000372121.5
ENST00000413164.6
ENST00000417157.2
ENST00000420568.5
ENST00000468915.5
ENST00000472148.5
ENST00000495082.5
CDS CAA 90 bp GTCCTCACTGAGCCCACCGAGACCCCAGCCTTGACCACCTTACCTTaGAAGTCAAACCACCACTTGAGAGAGGGCCTTTGGGACGGGAAG +
Preference number: 6 (lower is better)
Translates to: VLTEPTETPALTTLP*KSNHHLREGLWDGK
Trigger: CTTCCCGTCCCAAAGGCCCTCTCTCAAGTGGTGGTTTGACTTCAAAGGTAAGGTGGTCAAGGCTGGGGTCTCGGTGGGCTCAGTGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464518.1
CDS GCA 72 bp CCAACAAGCATCAGGATCTTGAGGGCGATTCGCCGGTaGAGGTTCCACTCCTCAATGGCGCTGGCCATGATC +
Preference number: 6 (lower is better)
Translates to: PTSIRILRAIRR*RFHSSMALAMI
Trigger: GATCATGGCCAGCGCCATTGAGGAGTGGAACCTGCACCGGCGAATCGCCCTCAAGATCCTGATGCTTGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000372121.5
ENST00000413164.6
ENST00000417157.2
ENST00000420568.5
ENST00000468915.5
ENST00000472148.5
ENST00000495082.5
CDS GCA 72 bp CCAGGGTGGTCTTTGGCTTCTGTGCTGGCGAGAAACTaGATCTCCGTGGGCACAGTGTGTAGGCCGTTTCTC +
Preference number: 6 (lower is better)
Translates to: PGWSLASVLARN*ISVGTVCRPFL
Trigger: GAGAAACGGCCTACACACTGTGCCCACGGAGATGCAGTTTCTCGCCAGCACAGAAGCCAAAGACCACCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000450298.5
ENST00000468915.5
ENST00000472148.5
ENST00000495082.5
CDS GCA 72 bp CCAGTCCGGGAAGGTGCCCAGCTGGAAGATGGTCTGTaGCCAGGTATTCATAGCCAAACTGAGCAGCAGGAC +
Preference number: 6 (lower is better)
Translates to: PVREGAQLEDGL*PGIHSQTEQQD
Trigger: GTCCTGCTGCTCAGTTTGGCTATGAATACCTGGGCACAGACCATCTTCCAGCTGGGCACCTTCCCGGACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
ENST00000495082.5
CDS CCA 72 bp CTTTGGCTTCTGTGCTGGCGAGAAACTGCATCTCCGTaGGCACAGTGTGTAGGCCGTTTCTCCGCACAGCAG +
Preference number: 6 (lower is better)
Translates to: LWLLCWRETASP*AQCVGRFSAQQ
Trigger: CTGCTGTGCGGAGAAACGGCCTACACACTGTGCCCACGGAGATGCAGTTTCTCGCCAGCACAGAAGCCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000450298.5
ENST00000468915.5
ENST00000472148.5
ENST00000495082.5
CDS CAA 72 bp GCGCTGGCCATGATCAGCCCACTGAGGAAGAGGAAGTaGGTGTCGAGGAAGTACTGGGGGCAGACCTTGTTG +
Preference number: 6 (lower is better)
Translates to: ALAMISPLRKRK*VSRKYWGQTLL
Trigger: CAACAAGGTCTGCCCCCAGTACTTCCTCGACACCAACTTCCTCTTCCTCAGTGGGCTGATCATGGCCAGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000372121.5
ENST00000413164.6
ENST00000417157.2
ENST00000420568.5
ENST00000468915.5
ENST00000472148.5
ENST00000495082.5
CDS CAA 90 bp GTCCGAAATGTGTCATTGGCCAAGGTGGGTGGCAATGCTGTGACATaGACCGAGTACATATCAGCCCAGTCCGGGAAGGTGCCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: VRNVSLAKVGGNAVT*TEYISAQSGKVPSW
Trigger: CCAGCTGGGCACCTTCCCGGACTGGGCTGATATGTACTCGGTCAATGTCACAGCATTGCCACCCACCTTGGCCAATGACACATTTCGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
ENST00000495082.5
CDS GCA 72 bp CAGTCCCCCGTACAGGAAGGAGATCCAGAGCCAGCCTaGCAACAGGAACAACAGCATAAGAGGGAAGGCGAA +
Preference number: 6 (lower is better)
Translates to: QSPVQEGDPEPA*QQEQQHKREGE
Trigger: TTCGCCTTCCCTCTTATGCTGTTGTTCCTGTTGGCAGGCTGGCTCTGGATCTCCTTCCTGTACGGGGGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000450298.5
ENST00000468915.5
ENST00000472148.5
ENST00000495082.5
CDS CCA 72 bp CCACTGAGGAAGAGGAAGTTGGTGTCGAGGAAGTACTaGGGGCAGACCTTGTTGGAGGGCAAGATGCCCATG +
Preference number: 6 (lower is better)
Translates to: PLRKRKLVSRKY*GQTLLEGKMPM
Trigger: CATGGGCATCTTGCCCTCCAACAAGGTCTGCCCCCAGTACTTCCTCGACACCAACTTCCTCTTCCTCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000372121.5
ENST00000413164.6
ENST00000417157.2
ENST00000420568.5
ENST00000468915.5
ENST00000472148.5
ENST00000495082.5
CDS CCA 72 bp TCCGCACAGCAGCTGTGTTCTCTTCACTCTCCTGGCTaGGGTCCTTTCGAACCTCCTTCTGGCCAAAGAGAC +
Preference number: 6 (lower is better)
Translates to: SAQQLCSLHSPG*GPFEPPSGQRD
Trigger: GTCTCTTTGGCCAGAAGGAGGTTCGAAAGGACCCCAGCCAGGAGAGTGAAGAGAACACAGCTGCTGTGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000468915.5
ENST00000472148.5
ENST00000495082.5
CDS CCA 72 bp CCCAGGGTGGTCTTTGCTGTGTTCTCTTCACTCTCCTaGCTGGGGTCCTTTCGAACCTCCTTCTGGCCAAAG +
Preference number: 6 (lower is better)
Translates to: PRVVFAVFSSLS*LGSFRTSFWPK
Trigger: CTTTGGCCAGAAGGAGGTTCGAAAGGACCCCAGCCAGGAGAGTGAAGAGAACACAGCAAAGACCACCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372121.5
ENST00000413164.6
ENST00000420568.5
CDS CAA 72 bp AAGTTGGTGTCGAGGAAGTACTGGGGGCAGACCTTGTaGGAGGGCAAGATGCCCATGAAGGGGAAGAGGACG +
Preference number: 6 (lower is better)
Translates to: KLVSRKYWGQTL*EGKMPMKGKRT
Trigger: CGTCCTCTTCCCCTTCATGGGCATCTTGCCCTCCAACAAGGTCTGCCCCCAGTACTTCCTCGACACCAACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000372121.5
ENST00000413164.6
ENST00000417157.2
ENST00000420568.5
ENST00000468915.5
ENST00000472148.5
ENST00000495082.5
CDS CCA 72 bp TGTCTCCTAGAAGGTGCACTGGGAGGCTTGGGAGGCTaGTGTAGCAGGGACCACCCATATGTAGCTTCCTTT +
Preference number: 6 (lower is better)
Translates to: CLLEGALGGLGG*CSRDHPYVASF
Trigger: AAAGGAAGCTACATATGGGTGGTCCCTGCTACACCAGCCTCCCAAGCCTCCCAGTGCACCTTCTAGGAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290317.9
ENST00000417157.2
ENST00000468915.5
ENST00000472148.5
CDS CCA 72 bp TTTCTCCGCACAGCAGCTGTGTTCTCTTCACTCTCCTaGCTGGGGTCCTTTCGAACCTCCTTCTGGCCAAAG +
Preference number: 6 (lower is better)
Translates to: FLRTAAVFSSLS*LGSFRTSFWPK
Trigger: CTTTGGCCAGAAGGAGGTTCGAAAGGACCCCAGCCAGGAGAGTGAAGAGAACACAGCTGCTGTGCGGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000468915.5
ENST00000472148.5
ENST00000495082.5
CDS CCA 72 bp GGGTGGTCTTTGCTGTGTTCTCTTCACTCTCCTGGCTaGGGTCCTTTCGAACCTCCTTCTGGCCAAAGAGAC +
Preference number: 6 (lower is better)
Translates to: GWSLLCSLHSPG*GPFEPPSGQRD
Trigger: GTCTCTTTGGCCAGAAGGAGGTTCGAAAGGACCCCAGCCAGGAGAGTGAAGAGAACACAGCAAAGACCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372121.5
ENST00000413164.6
ENST00000420568.5
CDS CAA 90 bp TCAAGGGAGTCCTCCAGGGGGACTCAGAGGGTCCGAAATGTGTCATaGGCCAAGGTGGGTGGCAATGCTGTGACATTGACCGAGTACATA +
Preference number: 6 (lower is better)
Translates to: SRESSRGTQRVRNVS*AKVGGNAVTLTEYI
Trigger: TATGTACTCGGTCAATGTCACAGCATTGCCACCCACCTTGGCCAATGACACATTTCGGACCCTCTGAGTCCCCCTGGAGGACTCCCTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
ENST00000495082.5
CDS CAA 90 bp CAGGGGCAGATCTGCCATCTATCTCTCAAGATGTGGCTCCTGTCTTaGGGTCCCAGGTGCCATCATATTCACATTCCACCCGGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: QGQICHLSLKMWLLS*GPRCHHIHIPPGRK
Trigger: CTTCCTGCCGGGTGGAATGTGAATATGATGGCACCTGGGACCCAAAGACAGGAGCCACATCTTGAGAGATAGATGGCAGATCTGCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS GCA 72 bp TCTCTCAAGATGTGGCTCCTGTCTTTGGGTCCCAGGTaGCATCATATTCACATTCCACCCGGCAGGAAGGAC +
Preference number: 6 (lower is better)
Translates to: SLKMWLLSLGPR*HHIHIPPGRKD
Trigger: GTCCTTCCTGCCGGGTGGAATGTGAATATGATGGCACCTGGGACCCAAAGACAGGAGCCACATCTTGAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS CCA 72 bp CCTTCCAGATGTTCCGACGATATTCATCCTCCTTCCTaGAGTCAGCCGGCAGATCCAGTGGAACCTCTGTCT +
Preference number: 6 (lower is better)
Translates to: PSRCSDDIHPPS*SQPADPVEPLS
Trigger: AGACAGAGGTTCCACTGGATCTGCCGGCTGACTCCAGGAAGGAGGATGAATATCGTCGGAACATCTGGAAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000372121.5
ENST00000413164.6
ENST00000420568.5
ENST00000450298.5
ENST00000468915.5
ENST00000472148.5
ENST00000495082.5
CDS CCA 72 bp GAGTACATATCAGCCCAGTCCGGGAAGGTGCCCAGCTaGAAGATGGTCTGTGCCCAGGTATTCATAGCCAAA +
Preference number: 6 (lower is better)
Translates to: EYISAQSGKVPS*KMVCAQVFIAK
Trigger: TTTGGCTATGAATACCTGGGCACAGACCATCTTCCAGCTGGGCACCTTCCCGGACTGGGCTGATATGTACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
ENST00000495082.5
CDS CCA 72 bp TTGAAACCCAGCTTGTGTTTTCCATGTGTGGCTCCCTaGGCAACCAAGGTGCAACTCCTGCTTTGGGCCAAG +
Preference number: 6 (lower is better)
Translates to: LKPSLCFPCVAP*ATKVQLLLWAK
Trigger: CTTGGCCCAAAGCAGGAGTTGCACCTTGGTTGCCCAGGGAGCCACACATGGAAAACACAAGCTGGGTTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464518.1
CDS CAA 72 bp ACCTCCTTCTGGCCAAAGAGACTTTTCAGGATGGCATaGGCAATGGGAAGCATCATGGCAGTGGAGGCGGTG +
Preference number: 6 (lower is better)
Translates to: TSFWPKRLFRMA*AMGSIMAVEAV
Trigger: CACCGCCTCCACTGCCATGATGCTTCCCATTGCCAATGCCATCCTGAAAAGTCTCTTTGGCCAGAAGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000372121.5
ENST00000413164.6
ENST00000417157.2
ENST00000420568.5
ENST00000468915.5
ENST00000472148.5
ENST00000495082.5
CDS CAA 90 bp TCCTTTCGAACCTCCTTCTGGCCAAAGAGACTTTTCAGGATGGCATaGGCAATGGGAAGCATCATGGCAGTGGAGGCGGTGTTGCTCAGC +
Preference number: 6 (lower is better)
Translates to: SFRTSFWPKRLFRMA*AMGSIMAVEAVLLS
Trigger: GCTGAGCAACACCGCCTCCACTGCCATGATGCTTCCCATTGCCAATGCCATCCTGAAAAGTCTCTTTGGCCAGAAGGAGGTTCGAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000372121.5
ENST00000413164.6
ENST00000417157.2
ENST00000420568.5
ENST00000468915.5
ENST00000472148.5
ENST00000495082.5
CDS TCA 72 bp CTGTGCCCCCAATACTGGCTGAGTAGGGGATGGAGATaGGGAAGCCCTTCCAGATGTTCCGACGATATTCAT +
Preference number: 6 (lower is better)
Translates to: LCPQYWLSRGWR*GSPSRCSDDIH
Trigger: ATGAATATCGTCGGAACATCTGGAAGGGCTTCCTCATCTCCATCCCCTACTCAGCCAGTATTGGGGGCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000372121.5
ENST00000413164.6
ENST00000420568.5
ENST00000450298.5
ENST00000468915.5
ENST00000472148.5
ENST00000495082.5
CDS GCA 72 bp GGTCCGAAATGTGTCATTGGCCAAGGTGGGTGGCAATaGTGTGACATTGACCGAGTACATATCAGCCCAGTC +
Preference number: 6 (lower is better)
Translates to: GPKCVIGQGGWQ*CDIDRVHISPV
Trigger: GACTGGGCTGATATGTACTCGGTCAATGTCACAGCATTGCCACCCACCTTGGCCAATGACACATTTCGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
ENST00000495082.5
CDS CCA 72 bp TCTGGCCAAAGAGACTTTTCAGGATGGCATTGGCAATaGGAAGCATCATGGCAGTGGAGGCGGTGTTGCTCA +
Preference number: 6 (lower is better)
Translates to: SGQRDFSGWHWQ*EASWQWRRCCS
Trigger: TGAGCAACACCGCCTCCACTGCCATGATGCTTCCCATTGCCAATGCCATCCTGAAAAGTCTCTTTGGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000372121.5
ENST00000413164.6
ENST00000417157.2
ENST00000420568.5
ENST00000468915.5
ENST00000472148.5
ENST00000495082.5
CDS CCA 72 bp ACAGCCTGTTCGGCAAACTTGATGGGCCCCAGGTTCTaGTATTCTTCCCGAATTACAGCTCGAGCCCTATCT +
Preference number: 6 (lower is better)
Translates to: TACSANLMGPRF*YSSRITARALS
Trigger: AGATAGGGCTCGAGCTGTAATTCGGGAAGAATACCAGAACCTGGGGCCCATCAAGTTTGCCGAACAGGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000372121.5
ENST00000413164.6
ENST00000420568.5
ENST00000450298.5
ENST00000468915.5
ENST00000495082.5
CDS CCA 72 bp TGGGTTCTATTCCTGTGTTCTCTTCACTCTCCTGGCTaGGGTCCTTTCGAACCTCCTTCTGGCCAAAGAGAC +
Preference number: 6 (lower is better)
Translates to: WVLFLCSLHSPG*GPFEPPSGQRD
Trigger: GTCTCTTTGGCCAGAAGGAGGTTCGAAAGGACCCCAGCCAGGAGAGTGAAGAGAACACAGGAATAGAACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS CCA 72 bp TTCGAACCTCCTTCTGGCCAAAGAGACTTTTCAGGATaGCATTGGCAATGGGAAGCATCATGGCAGTGGAGG +
Preference number: 6 (lower is better)
Translates to: FEPPSGQRDFSG*HWQWEASWQWR
Trigger: CCTCCACTGCCATGATGCTTCCCATTGCCAATGCCATCCTGAAAAGTCTCTTTGGCCAGAAGGAGGTTCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000372121.5
ENST00000413164.6
ENST00000417157.2
ENST00000420568.5
ENST00000468915.5
ENST00000472148.5
ENST00000495082.5
CDS CCA 72 bp TCAGAGGGTCCGAAATGTGTCATTGGCCAAGGTGGGTaGCAATGCTGTGACATTGACCGAGTACATATCAGC +
Preference number: 6 (lower is better)
Translates to: SEGPKCVIGQGG*QCCDIDRVHIS
Trigger: GCTGATATGTACTCGGTCAATGTCACAGCATTGCCACCCACCTTGGCCAATGACACATTTCGGACCCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000472148.5
ENST00000495082.5
CDS CCA 72 bp TCTGCCATCTATCTCTCAAGATGTGGCTCCTGTCTTTaGGTCCCAGGTGCCATCATATTCACATTCCACCCG +
Preference number: 6 (lower is better)
Translates to: SAIYLSRCGSCL*VPGAIIFTFHP
Trigger: CGGGTGGAATGTGAATATGATGGCACCTGGGACCCAAAGACAGGAGCCACATCTTGAGAGATAGATGGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS CAA 72 bp GTCTCTGTGTTGGGAGCTTTGAAGTCAAACCACCACTaGAGAGAGGGCCTTTGGGACGGGAAGAAGAACAAG +
Preference number: 6 (lower is better)
Translates to: VSVLGALKSNHH*REGLWDGKKNK
Trigger: CTTGTTCTTCTTCCCGTCCCAAAGGCCCTCTCTCAAGTGGTGGTTTGACTTCAAAGCTCCCAACACAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000468915.5
ENST00000472148.5
ENST00000495082.5
CDS CAA 72 bp GCCTTGACCACCTTACCTTTGAAGTCAAACCACCACTaGAGAGAGGGCCTTTGGGACGGGAAGAAGAACAAG +
Preference number: 6 (lower is better)
Translates to: ALTTLPLKSNHH*REGLWDGKKNK
Trigger: CTTGTTCTTCTTCCCGTCCCAAAGGCCCTCTCTCAAGTGGTGGTTTGACTTCAAAGGTAAGGTGGTCAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464518.1
CDS CCA 72 bp GCTTTGAAGTCAAACCACCACTTGAGAGAGGGCCTTTaGGACGGGAAGAAGAACAAGATGGTGACAATAGCC +
Preference number: 6 (lower is better)
Translates to: ALKSNHHLREGL*DGKKNKMVTIA
Trigger: GGCTATTGTCACCATCTTGTTCTTCTTCCCGTCCCAAAGGCCCTCTCTCAAGTGGTGGTTTGACTTCAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000413164.6
ENST00000468915.5
ENST00000472148.5
ENST00000495082.5
CDS CCA 72 bp CAGGATGACAAACAAGCAGCGGCCTTCAGTTCAGCATaGCTGGGGATGCCTCAGAAAACTTATAATCATGGC +
Preference number: 6 (lower is better)
Translates to: QDDKQAAAFSSA*LGMPQKTYNHG
Trigger: GCCATGATTATAAGTTTTCTGAGGCATCCCCAGCCATGCTGAACTGAAGGCCGCTGCTTGTTTGTCATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372121.5
CDS CCA 72 bp CCTTTGAAGTCAAACCACCACTTGAGAGAGGGCCTTTaGGACGGGAAGAAGAACAAGATGGTGACAATAGCC +
Preference number: 6 (lower is better)
Translates to: PLKSNHHLREGL*DGKKNKMVTIA
Trigger: GGCTATTGTCACCATCTTGTTCTTCTTCCCGTCCCAAAGGCCCTCTCTCAAGTGGTGGTTTGACTTCAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464518.1
CDS CCA 72 bp ATGACAAACAAGCAGCGGCCTTCAGTTCAGCATGGCTaGGGATGCCTCAGAAAACTTATAATCATGGCAGAT +
Preference number: 6 (lower is better)
Translates to: MTNKQRPSVQHG*GCLRKLIIMAD
Trigger: ATCTGCCATGATTATAAGTTTTCTGAGGCATCCCCAGCCATGCTGAACTGAAGGCCGCTGCTTGTTTGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372121.5
CDS CAA 90 bp TTCTGGTATTCTTCCCGAATTACAGCTCGAGCCCTATCTTCTGCATaGGTTCTTATCTCAGATTTATTCTTCCTCCAGCCCCTGAAGCTC +
Preference number: 6 (lower is better)
Translates to: FWYSSRITARALSSA*VLISDLFFLQPLKL
Trigger: GAGCTTCAGGGGCTGGAGGAAGAATAAATCTGAGATAAGAACCAATGCAGAAGATAGGGCTCGAGCTGTAATTCGGGAAGAATACCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000372121.5
ENST00000413164.6
ENST00000420568.5
ENST00000450298.5
ENST00000468915.5
ENST00000472148.5
ENST00000495082.5
CDS CCA 72 bp CTTGAAGTTTCAGCCTTTCCTCAGAGAGGAAAGTATTaGGTTCTATTCCTGTGTTCTCTTCACTCTCCTGGC +
Preference number: 6 (lower is better)
Translates to: LEVSAFPQRGKY*VLFLCSLHSPG
Trigger: GCCAGGAGAGTGAAGAGAACACAGGAATAGAACCCAATACTTTCCTCTCTGAGGAAAGGCTGAAACTTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS CAA 90 bp TTGACCAGACTCAGTTATCTGACCAAGTCTTATCACAAGGGGAGCTaGAAGTTTCAGCCTTTCCTCAGAGAGGAAAGTATTGGGTTCTAT +
Preference number: 6 (lower is better)
Translates to: LTRLSYLTKSYHKGS*KFQPFLREESIGFY
Trigger: ATAGAACCCAATACTTTCCTCTCTGAGGAAAGGCTGAAACTTCAAGCTCCCCTTGTGATAAGACTTGGTCAGATAACTGAGTCTGGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417157.2
CDS GCA 72 bp GTATTCTTCCCGAATTACAGCTCGAGCCCTATCTTCTaGATTGGTTCTTATCTCAGATTTATTCTTCCTCCA +
Preference number: 6 (lower is better)
Translates to: VFFPNYSSSPIF*IGSYLRFILPP
Trigger: TGGAGGAAGAATAAATCTGAGATAAGAACCAATGCAGAAGATAGGGCTCGAGCTGTAATTCGGGAAGAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279027.9
ENST00000290317.9
ENST00000372121.5
ENST00000413164.6
ENST00000420568.5
ENST00000450298.5
ENST00000468915.5
ENST00000472148.5
ENST00000495082.5