RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC13A2 (Homo sapiens)

Ensembl gene IDs: ENSG00000007216

Ensembl transcript IDs: ENST00000314669.10, ENST00000444914.7, ENST00000459818.2, ENST00000545060.2, ENST00000577903.5, ENST00000579281.5

Found 829 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTTCCTGGGCATGGCCAGGCTGTGCCCCAGCCTAGGGGCTTGGTGTaGTGGTGTTGGCCAGGCTTGGCAGGCACTGGGCTGTGGTGTTGG +
Preference number: 1 (lower is better)
Translates to: LPGHGQAVPQPRGLV*WCWPGLAGTGLWCW
Trigger: CCAACACCACAGCCCAGTGCCTGCCAAGCCTGGCCAACACCACCACACCAAGCCCCTAGGCTGGGGCACAGCCTGGCCATGCCCAGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR CCA 90 bp TGGGTCTTCCTGGGCATGGCCAGGCTGTGCCCCAGCCTAGGGGCTTaGTGTGGTGGTGTTGGCCAGGCTTGGCAGGCACTGGGCTGTGGT +
Preference number: 1 (lower is better)
Translates to: WVFLGMARLCPSLGA*CGGVGQAWQALGCG
Trigger: ACCACAGCCCAGTGCCTGCCAAGCCTGGCCAACACCACCACACCAAGCCCCTAGGCTGGGGCACAGCCTGGCCATGCCCAGGAAGACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR GCA 90 bp TCGAAGGTGGGGTTGTTGCTGCCCTCCTCGACGTTGCTGCTGGCTTaGGAGCTGTGCAGCTGGTCCAGGACGGCATGTGCGATGGGCACC +
Preference number: 1 (lower is better)
Translates to: SKVGLLLPSSTLLLA*ELCSWSRTACAMGT
Trigger: GGTGCCCATCGCACATGCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAACCCCACCTTCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR GCA 90 bp CCTGGAGCTCGAAGGTGGGGTTGTTGCTGCCCTCCTCGACGTTGCTaGTGGCTTGCGAGCTGTGCAGCTGGTCCAGGACGGCATGTGCGA +
Preference number: 1 (lower is better)
Translates to: PGARRWGCCCPPRRC*WLASCAAGPGRHVR
Trigger: TCGCACATGCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR GCA 90 bp CAGGCTCATGCACTGGGTGAGGTGGAGATGCTTCTGGCTGAGATGTaGCCTCCCCTCCGAAGAGGCAGACGTGACAGGGAGGGCCTGCCC +
Preference number: 1 (lower is better)
Translates to: QAHALGEVEMLLAEM*PPLRRGRRDREGLP
Trigger: GGGCAGGCCCTCCCTGTCACGTCTGCCTCTTCGGAGGGGAGGGCACATCTCAGCCAGAAGCATCTCCACCTCACCCAGTGCATGAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR CCA 90 bp GGAGCTCGAAGGTGGGGTTGTTGCTGCCCTCCTCGACGTTGCTGCTaGCTTGCGAGCTGTGCAGCTGGTCCAGGACGGCATGTGCGATGG +
Preference number: 1 (lower is better)
Translates to: GARRWGCCCPPRRCC*LASCAAGPGRHVRW
Trigger: CCATCGCACATGCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAACCCCACCTTCGAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR GCA 90 bp GGGTTGTTGCTGCCCTCCTCGACGTTGCTGCTGGCTTGCGAGCTGTaGAGCTGGTCCAGGACGGCATGTGCGATGGGCACCATCATGGCT +
Preference number: 1 (lower is better)
Translates to: GLLLPSSTLLLACEL*SWSRTACAMGTIMA
Trigger: AGCCATGATGGTGCCCATCGCACATGCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR GCA 90 bp GTTCCTGGAGCTCGAAGGTGGGGTTGTTGCTGCCCTCCTCGACGTTaGTGCTGGCTTGCGAGCTGTGCAGCTGGTCCAGGACGGCATGTG +
Preference number: 1 (lower is better)
Translates to: VPGARRWGCCCPPRR*CWLASCAAGPGRHV
Trigger: CACATGCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR CCA 90 bp ACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTGGAGCTTaGGGTGTCCCCTCCGGGCTCAGAGGAGTGGGAATGGGGTGGGTC +
Preference number: 1 (lower is better)
Translates to: TRAFQPLAWSLELGA*GVPSGLRGVGMGWV
Trigger: GACCCACCCCATTCCCACTCCTCTGAGCCCGGAGGGGACACCCCAAGCTCCAAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
3UTR CCA 90 bp TTGCTGCCCTCCTCGACGTTGCTGCTGGCTTGCGAGCTGTGCAGCTaGTCCAGGACGGCATGTGCGATGGGCACCATCATGGCTGAGGTG +
Preference number: 1 (lower is better)
Translates to: LLPSSTLLLACELCS*SRTACAMGTIMAEV
Trigger: CACCTCAGCCATGATGGTGCCCATCGCACATGCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR GCA 90 bp CCTTCTGGGGACTTGGTTCCTGGAGCTCGAAGGTGGGGTTGTTGCTaGCCTCCTCGACGTTGCTGCTGGCTTGCGAGCTGTGCAGCTGGT +
Preference number: 1 (lower is better)
Translates to: PSGDLVPGARRWGCC*PPRRCCWLASCAAG
Trigger: ACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR GCA 90 bp CCTCCTTCTGGGGACTTGGTTCCTGGAGCTCGAAGGTGGGGTTGTTaGTGCCCTCCTCGACGTTGCTGCTGGCTTGCGAGCTGTGCAGCT +
Preference number: 1 (lower is better)
Translates to: PPSGDLVPGARRWGC*CPPRRCCWLASCAA
Trigger: AGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR CCA 90 bp GCTTGGTCACCTCCTTCTGGGGACTTGGTTCCTGGAGCTCGAAGGTaGGGTTGTTGCTGCCCTCCTCGACGTTGCTGCTGGCTTGCGAGC +
Preference number: 1 (lower is better)
Translates to: AWSPPSGDLVPGARR*GCCCPPRRCCWLAS
Trigger: GCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGGAGGTGACCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR CCA 90 bp GAGGGCCTGCCCATTATCAAGCTTGGTCACCTCCTTCTGGGGACTTaGTTCCTGGAGCTCGAAGGTGGGGTTGTTGCTGCCCTCCTCGAC +
Preference number: 1 (lower is better)
Translates to: EGLPIIKLGHLLLGT*FLELEGGVVAALLD
Trigger: GTCGAGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGCAGGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR CCA 90 bp TGCCCATTATCAAGCTTGGTCACCTCCTTCTGGGGACTTGGTTCCTaGAGCTCGAAGGTGGGGTTGTTGCTGCCCTCCTCGACGTTGCTG +
Preference number: 1 (lower is better)
Translates to: CPLSSLVTSFWGLGS*SSKVGLLLPSSTLL
Trigger: CAGCAACGTCGAGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR CCA 90 bp ACAGGGTGGAGGGTGGTGGAGATGAGCCTCTCCCATAGACAAGCCTaGGGAACCTTCATCCCCCACCAAGTGTTACCTCCTGTTCTGCAA +
Preference number: 1 (lower is better)
Translates to: TGWRVVEMSLSHRQA*GTFIPHQVLPPVLQ
Trigger: TTGCAGAACAGGAGGTAACACTTGGTGGGGGATGAAGGTTCCCCAGGCTTGTCTATGGGAGAGGCTCATCTCCACCACCCTCCACCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577903.5
3UTR GCA 90 bp CATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTaGCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTGGAGCTTGGGG +
Preference number: 1 (lower is better)
Translates to: HTPLPYRHARDYVHT*LSAFGLELGAWSLG
Trigger: CCCCAAGCTCCAAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
3UTR CCA 90 bp CAACATTCCCACAGACTGGCATTCCCCTGGGCTCTCGAAACTGGATaGAAATGGTCTCTGAATGATCTCAGAGGCATCCACGATGCCCAT +
Preference number: 1 (lower is better)
Translates to: QHSHRLAFPWALETG*KWSLNDLRGIHDAH
Trigger: ATGGGCATCGTGGATGCCTCTGAGATCATTCAGAGACCATTTCCATCCAGTTTCGAGAGCCCAGGGGAATGCCAGTCTGTGGGAATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459818.2
3UTR TCA 90 bp CGCACACACACATGCACACACCTTTTATTCCAGCACATAGGAAACTaGGCATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACA +
Preference number: 1 (lower is better)
Translates to: RTHTCTHLLFQHIGN*AYTPSLQTRKRLCT
Trigger: TGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATGCTCAGTTTCCTATGTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
3UTR TCA 90 bp CTCTCTGCTGATTCAGGAAGAAGTTTCTGTATAAGTATTGGAGGATaGCTTTGTGCCAGGCGTCATATTCTATGTGCTTCAAATGCTTTT +
Preference number: 1 (lower is better)
Translates to: LSADSGRSFCISIGG*LCARRHILCASNAF
Trigger: AAAAGCATTTGAAGCACATAGAATATGACGCCTGGCACAAAGTCATCCTCCAATACTTATACAGAAACTTCTTCCTGAATCAGCAGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR GCA 90 bp TATAAGTATTGGAGGATGACTTTGTGCCAGGCGTCATATTCTATGTaGTTCAAATGCTTTTACAAGTTGCATTTATTTGCTCTCAGAGGT +
Preference number: 1 (lower is better)
Translates to: YKYWRMTLCQASYSM*FKCFYKLHLFALRG
Trigger: ACCTCTGAGAGCAAATAAATGCAACTTGTAAAAGCATTTGAAGCACATAGAATATGACGCCTGGCACAAAGTCATCCTCCAATACTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR TCA 90 bp CATGGGGCCCAGCAGCCTGTGCTCGGTCTGGATGACGCAGTAGGCTGCCTGCTGCCGAAGAGGCAGACGTaGCAGGGAGGGCCTGCCCAT +
Preference number: 2 (lower is better)
Translates to: HGAQQPVLGLDDAVGCLLPKRQT*QGGPAH
Trigger: ATGGGCAGGCCCTCCCTGTCACGTCTGCCTCTTCGG...CAGCAGGCAGCCTACTGCGTCATCCAGACCGAGCACAGGCTGCTGGGCCCCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR GCA 90 bp CATGGGGCCCAGCAGCCTGTGCTCGGTCTGGATGACGCAGTAGGCTGCCTGCTGTGGCGATGCCCCCGATaGTGGCGGAGTAGCACACGC +
Preference number: 2 (lower is better)
Translates to: HGAQQPVLGLDDAVGCLLWRCPR*WRSSTR
Trigger: GCGTGTGCTACTCCGCCAGCATCGGGGGCATCGCCA...CAGCAGGCAGCCTACTGCGTCATCCAGACCGAGCACAGGCTGCTGGGCCCCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CCA 90 bp GATCTGGCCTTGCAGCACCAGGTTGGGTGCGGTGCCAGTCAGCGTGGCGATGCCCAGAGGCTGTTCCCGTaGCAGCTGCTGGCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: DLALQHQVGCGASQRGDAQRLFP*QLLAGP
Trigger: AGGGCCTGCCAGCAGCTGCCACGGGAACAGCCTCTG...GGCATCGCCACGCTGACTGGCACCGCACCCAACCTGGTGCTGCAAGGCCAGATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459818.2
3UTR-3UTR TCA 90 bp TTGGGGGAAGAGCGAGTTGATCTGGCCTTGCAGCACCAGGTTGGGTGCGGTGCCGCCGCACCCCAACGATaGGGAGGACACGGAGGGCGA +
Preference number: 2 (lower is better)
Translates to: LGEERVDLALQHQVGCGAAAPQR*GGHGGR
Trigger: TCGCCCTCCGTGTCCTCCTCATCGTTGGGGTGCGGC...GGCACCGCACCCAACCTGGTGCTGCAAGGCCAGATCAACTCGCTCTTCCCCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR TCA 90 bp GGCCCGATCGCTCACTGCCCTTGGCCAGGGCATAGCCACCACCCAGCAATAACAAGCCCGGCTCCCGGGTaGACCAGAGCAGCACCAGGA +
Preference number: 2 (lower is better)
Translates to: GPIAHCPWPGHSHHPAITSPAPG*TRAAPG
Trigger: TCCTGGTGCTGCTCTGGTTCACCCGGGAGCCGGGCT...TGTTATTGCTGGGTGGTGGCTATGCCCTGGCCAAGGGCAGTGAGCGATCGGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CCA 90 bp GATCTGGCCTTGCAGCACCAGGTTGGGTGCGGTGCCAGTCAGCGTGGCGATGCCTTGGAGCTTGGAGCTTaGGGTGTCCCCTCCGGGCTC +
Preference number: 2 (lower is better)
Translates to: DLALQHQVGCGASQRGDALELGA*GVPSGL
Trigger: GAGCCCGGAGGGGACACCCCAAGCTCCAAGCTCCAA...GGCATCGCCACGCTGACTGGCACCGCACCCAACCTGGTGCTGCAAGGCCAGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR CAA 90 bp CTCGAAGGTGGGGTTGTTGCTGCCCTCCTCGACGTTGCTGCTGGCTaGCGAGCTGTGCAGCTGGTCCAGGACGGCATGTGCGATGGGCAC +
Preference number: 2 (lower is better)
Translates to: LEGGVVAALLDVAAG*RAVQLVQDGMCDGH
Trigger: GTGCCCATCGCACATGCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAACCCCACCTTCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CCA 90 bp GATCTGGCCTTGCAGCACCAGGTTGGGTGCGGTGCCAGTCAGCGTGGCGATGCCCCTGGAGCTCGAAGGTaGGGTTGTTGCTGCCCTCCT +
Preference number: 2 (lower is better)
Translates to: DLALQHQVGCGASQRGDAPGARR*GCCCPP
Trigger: AGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGG...GGCATCGCCACGCTGACTGGCACCGCACCCAACCTGGTGCTGCAAGGCCAGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR CAA 90 bp GGTTCCTGGAGCTCGAAGGTGGGGTTGTTGCTGCCCTCCTCGACGTaGCTGCTGGCTTGCGAGCTGTGCAGCTGGTCCAGGACGGCATGT +
Preference number: 2 (lower is better)
Translates to: GSWSSKVGLLLPSST*LLACELCSWSRTAC
Trigger: ACATGCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR GCA 90 bp AAAGGTCATGGGGCCCAGCAGCCTGTGCTCGGTCTGGATGACGCAGTAGGCTGCCTGGCTTGCGAGCTGTaGAGCTGGTCCAGGACGGCA +
Preference number: 2 (lower is better)
Translates to: KGHGAQQPVLGLDDAVGCLACEL*SWSRTA
Trigger: TGCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAG...GCAGCCTACTGCGTCATCCAGACCGAGCACAGGCTGCTGGGCCCCATGACCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR GCA 90 bp TCTGCAATGGGGGCCCTATACCCTTCCCTCCTTCCCGAGCATGTGAGCCCCAGAGGGCCCAGCAGCCTGTaGTCGGTCTGGATGACGCAG +
Preference number: 2 (lower is better)
Translates to: SAMGALYPSLLPEHVSPRGPSSL*SVWMTQ
Trigger: CTGCGTCATCCAGACCGAGCACAGGCTGCTGGGCCC...TCTGGGGCTCACATGCTCGGGAAGGAGGGAAGGGTATAGGGCCCCCATTGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577903.5
3UTR-3UTR CCA 90 bp GCTGGCTTGCGAGCTGTGCAGCTGGTCCAGGACGGCATGTGCGATGGGCACCATCTGGAGCTTGGAGCTTaGAGCTTGGGGTGTCCCCTC +
Preference number: 2 (lower is better)
Translates to: AGLRAVQLVQDGMCDGHHLELGA*SLGCPL
Trigger: GAGGGGACACCCCAAGCTCCAAGCTCCAAGCTCCAG...ATGGTGCCCATCGCACATGCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CCA 90 bp CCCGAGCATGTGAGCCCCAGATGTGTCCTCCTCCCAACCCCTGCAACTCTCACCCTTGCAGCACCAGGTTaGGTGCGGTGCCAGTCAGCG +
Preference number: 2 (lower is better)
Translates to: PEHVSPRCVLLPTPATLTLAAPG*VRCQSA
Trigger: CGCTGACTGGCACCGCACCCAACCTGGTGCTGCAAG...GGTGAGAGTTGCAGGGGTTGGGAGGAGGACACATCTGGGGCTCACATGCTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577903.5
3UTR CAA 90 bp ACCTCCTTCTGGGGACTTGGTTCCTGGAGCTCGAAGGTGGGGTTGTaGCTGCCCTCCTCGACGTTGCTGCTGGCTTGCGAGCTGTGCAGC +
Preference number: 2 (lower is better)
Translates to: TSFWGLGSWSSKVGL*LPSSTLLLACELCS
Trigger: GCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR CAA 90 bp GTCACCTCCTTCTGGGGACTTGGTTCCTGGAGCTCGAAGGTGGGGTaGTTGCTGCCCTCCTCGACGTTGCTGCTGGCTTGCGAGCTGTGC +
Preference number: 2 (lower is better)
Translates to: VTSFWGLGSWSSKVG*LLPSSTLLLACELC
Trigger: GCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGGAGGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR TCA 90 bp GATGGCCTTTTCTGCAAAGGTCATGGGGCCCAGCAGCCTGTGCTCGGTCTGGATCCGAAGAGGCAGACGTaGCAGGGAGGGCCTGCCCAT +
Preference number: 2 (lower is better)
Translates to: DGLFCKGHGAQQPVLGLDPKRQT*QGGPAH
Trigger: ATGGGCAGGCCCTCCCTGTCACGTCTGCCTCTTCGG...ATCCAGACCGAGCACAGGCTGCTGGGCCCCATGACCTTTGCAGAAAAGGCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR TCA 90 bp GGCCCGATCGCTCACTGCCCTTGGCCAGGGCATAGCCACCACCCAGCAATAACAGGCTCATGCACTGGGTaGGGTGGAGATGCTTCTGGC +
Preference number: 2 (lower is better)
Translates to: GPIAHCPWPGHSHHPAITGSCTG*GGDASG
Trigger: GCCAGAAGCATCTCCACCTCACCCAGTGCATGAGCC...TGTTATTGCTGGGTGGTGGCTATGCCCTGGCCAAGGGCAGTGAGCGATCGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR TCA 90 bp AAAGGTCATGGGGCCCAGCAGCCTGTGCTCGGTCTGGATGACGCAGTAGGCTGCGGGGGAAGAGCGAGTTaGTCTGGCCTTGCAGCACCA +
Preference number: 2 (lower is better)
Translates to: KGHGAQQPVLGLDDAVGCGGRAS*SGLAAP
Trigger: TGGTGCTGCAAGGCCAGATCAACTCGCTCTTCCCCC...GCAGCCTACTGCGTCATCCAGACCGAGCACAGGCTGCTGGGCCCCATGACCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR GCA 90 bp GATCTGGCCTTGCAGCACCAGGTTGGGTGCGGTGCCAGTCAGCGTGGCGATGCCGGACACGGAGGGCGATaGGTTTATGCAGGTTCCAGT +
Preference number: 2 (lower is better)
Translates to: DLALQHQVGCGASQRGDAGHGGR*VYAGSS
Trigger: ACTGGAACCTGCATAAACGCATCGCCCTCCGTGTCC...GGCATCGCCACGCTGACTGGCACCGCACCCAACCTGGTGCTGCAAGGCCAGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR GCA 90 bp AAAGGTCATGGGGCCCAGCAGCCTGTGCTCGGTCTGGATGACGCAGTAGGCTGCCGAAGGTGGGGTTGTTaGTGCCCTCCTCGACGTTGC +
Preference number: 2 (lower is better)
Translates to: KGHGAQQPVLGLDDAVGCRRWGC*CPPRRC
Trigger: GCAACGTCGAGGAGGGCAGCAACAACCCCACCTTCG...GCAGCCTACTGCGTCATCCAGACCGAGCACAGGCTGCTGGGCCCCATGACCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR TCA 90 bp CCGATCGCTCACTGCCCTTGGCCAGGGCATAGCCACCACCCAGCAATAACACGAGGGGGAAGAGCGAGTTaGTCTGGCCTTGCAGCACCA +
Preference number: 2 (lower is better)
Translates to: PIAHCPWPGHSHHPAITRGGRAS*SGLAAP
Trigger: TGGTGCTGCAAGGCCAGATCAACTCGCTCTTCCCCC...TCGTGTTATTGCTGGGTGGTGGCTATGCCCTGGCCAAGGGCAGTGAGCGATCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR TCA 90 bp CCGATCGCTCACTGCCCTTGGCCAGGGCATAGCCACCACCCAGCAATAACACGATGTGCTCGGTCTGGATaGCGCAGTAGGCTGCCTGCT +
Preference number: 2 (lower is better)
Translates to: PIAHCPWPGHSHHPAITRCARSG*RSRLPA
Trigger: AGCAGGCAGCCTACTGCGTCATCCAGACCGAGCACA...TCGTGTTATTGCTGGGTGGTGGCTATGCCCTGGCCAAGGGCAGTGAGCGATCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR GCA 90 bp CATGGGGCCCAGCAGCCTGTGCTCGGTCTGGATGACGCAGTAGGCTGCCTGCTGAGGGCGATGCGTTTATaGAGGTTCCAGTGTTCCACC +
Preference number: 2 (lower is better)
Translates to: HGAQQPVLGLDDAVGCLLRAMRL*RFQCST
Trigger: GGTGGAACACTGGAACCTGCATAAACGCATCGCCCT...CAGCAGGCAGCCTACTGCGTCATCCAGACCGAGCACAGGCTGCTGGGCCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR GCA 90 bp GCTCACTGCCCTTGGCCAGGGCATAGCCACCACCCAGCAATAACACGATATTCCTGGCGATGCCCCCGATaGTGGCGGAGTAGCACACGC +
Preference number: 2 (lower is better)
Translates to: AHCPWPGHSHHPAITRYSWRCPR*WRSSTR
Trigger: GCGTGTGCTACTCCGCCAGCATCGGGGGCATCGCCA...GGAATATCGTGTTATTGCTGGGTGGTGGCTATGCCCTGGCCAAGGGCAGTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CCA 90 bp TTGGGGGAAGAGCGAGTTGATCTGGCCTTGCAGCACCAGGTTGGGTGCGGTGCCCTTTGGCCTGGAGCTTaGAGCTTGGAGCTTGGGGTG +
Preference number: 2 (lower is better)
Translates to: LGEERVDLALQHQVGCGALWPGA*SLELGV
Trigger: CACCCCAAGCTCCAAGCTCCAAGCTCCAGGCCAAAG...GGCACCGCACCCAACCTGGTGCTGCAAGGCCAGATCAACTCGCTCTTCCCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CCA 90 bp GCCGTTTTGGGGGAAGAGCGAGTTGATCTGGCCTTGCAGCACCAGGTTGGGTGCGGACGGCATGTGCGATaGGCACCATCATGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: AVLGEERVDLALQHQVGCGRHVR*APSWLR
Trigger: CCTCAGCCATGATGGTGCCCATCGCACATGCCGTCC...GCACCCAACCTGGTGCTGCAAGGCCAGATCAACTCGCTCTTCCCCCAAAACGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR CAA 90 bp GGAGGGCCTGCCCATTATCAAGCTTGGTCACCTCCTTCTGGGGACTaGGTTCCTGGAGCTCGAAGGTGGGGTTGTTGCTGCCCTCCTCGA +
Preference number: 2 (lower is better)
Translates to: GGPAHYQAWSPPSGD*VPGARRWGCCCPPR
Trigger: TCGAGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGCAGGCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR GCA 90 bp TTGGGGGAAGAGCGAGTTGATCTGGCCTTGCAGCACCAGGTTGGGTGCGGTGCCGTGACAGGGAGGGCCTaGCCATTATCAAGCTTGGTC +
Preference number: 2 (lower is better)
Translates to: LGEERVDLALQHQVGCGAVTGRA*PLSSLV
Trigger: GACCAAGCTTGATAATGGGCAGGCCCTCCCTGTCAC...GGCACCGCACCCAACCTGGTGCTGCAAGGCCAGATCAACTCGCTCTTCCCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR GCA 90 bp GGCCCGATCGCTCACTGCCCTTGGCCAGGGCATAGCCACCACCCAGCAATAACATGGGTGAGGTGGAGATaGTTCTGGCTGAGATGTGCC +
Preference number: 2 (lower is better)
Translates to: GPIAHCPWPGHSHHPAITWVRWR*FWLRCA
Trigger: GGCACATCTCAGCCAGAAGCATCTCCACCTCACCCA...TGTTATTGCTGGGTGGTGGCTATGCCCTGGCCAAGGGCAGTGAGCGATCGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CCA 90 bp GACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCCCTCCTCCTTTCAGCCTTTGGCCTaGAGCTTGGAGCTTGGAGCT +
Preference number: 2 (lower is better)
Translates to: DFNSPEAVPVAAAGRPSSFQPLA*SLELGA
Trigger: AGCTCCAAGCTCCAAGCTCCAGGCCAAAGGCTGAAA...GGAGGAGGGCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
3UTR-3UTR CCA 90 bp GATGGCCTTTTCTGCAAAGGTCATGGGGCCCAGCAGCCTGTGCTCGGTCTGGATCCTCGACGTTGCTGCTaGCTTGCGAGCTGTGCAGCT +
Preference number: 2 (lower is better)
Translates to: DGLFCKGHGAQQPVLGLDPRRCC*LASCAA
Trigger: AGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGG...ATCCAGACCGAGCACAGGCTGCTGGGCCCCATGACCTTTGCAGAAAAGGCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CCA 90 bp GGCCCGATCGCTCACTGCCCTTGGCCAGGGCATAGCCACCACCCAGCAATAACAGTCCTGGGTCAGCCCTaGGAACTTGGAGGGTATGAT +
Preference number: 2 (lower is better)
Translates to: GPIAHCPWPGHSHHPAITVLGQP*ELGGYD
Trigger: ATCATACCCTCCAAGTTCCCAGGGCTGACCCAGGAC...TGTTATTGCTGGGTGGTGGCTATGCCCTGGCCAAGGGCAGTGAGCGATCGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CCA 90 bp GAAGAGGGGGATGCCCCAGCTGTTGATGGCCAGTGCGATGATCAGGACTCCAATCCCAGCCTAGGGGCTTaGTGTGGTGGTGTTGGCCAG +
Preference number: 2 (lower is better)
Translates to: EEGDAPAVDGQCDDQDSNPSLGA*CGGVGQ
Trigger: CTGGCCAACACCACCACACCAAGCCCCTAGGCTGGG...ATTGGAGTCCTGATCATCGCACTGGCCATCAACAGCTGGGGCATCCCCCTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR TCA 90 bp GATCTGGCCTTGCAGCACCAGGTTGGGTGCGGTGCCAGTCAGCGTGGCGATGCCCAGCACATAGGAAACTaGGCATACACCCCTTCCTTA +
Preference number: 2 (lower is better)
Translates to: DLALQHQVGCGASQRGDAQHIGN*AYTPSL
Trigger: TAAGGAAGGGGTGTATGCTCAGTTTCCTATGTGCTG...GGCATCGCCACGCTGACTGGCACCGCACCCAACCTGGTGCTGCAAGGCCAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR GCA 90 bp GCCCTCCTCGACGTTGCTGCTGGCTTGCGAGCTGTGCAGCTGGTCCAGGACGGCGTGAACACACACGTGTaGACTGTCCAACATACATAC +
Preference number: 2 (lower is better)
Translates to: ALLDVAAGLRAVQLVQDGVNTHV*TVQHTY
Trigger: GTATGTATGTTGGACAGTGCACACGTGTGTGTTCAC...GCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR GCA 90 bp CCGATCGCTCACTGCCCTTGGCCAGGGCATAGCCACCACCCAGCAATAACACGAGGACACGGAGGGCGATaGGTTTATGCAGGTTCCAGT +
Preference number: 2 (lower is better)
Translates to: PIAHCPWPGHSHHPAITRGHGGR*VYAGSS
Trigger: ACTGGAACCTGCATAAACGCATCGCCCTCCGTGTCC...TCGTGTTATTGCTGGGTGGTGGCTATGCCCTGGCCAAGGGCAGTGAGCGATCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR GCA 90 bp GCTCACTGCCCTTGGCCAGGGCATAGCCACCACCCAGCAATAACACGATATTCCTGCCCTCCTCGACGTTaGTGCTGGCTTGCGAGCTGT +
Preference number: 2 (lower is better)
Translates to: AHCPWPGHSHHPAITRYSCPPRR*CWLASC
Trigger: ACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCA...GGAATATCGTGTTATTGCTGGGTGGTGGCTATGCCCTGGCCAAGGGCAGTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR GCA 90 bp AGGATGACGAATAGGATGCTGATGGCCTTTTCTGCAAAGGTCATGGGGCCCAGCTGGCGATGCCCCCGATaGTGGCGGAGTAGCACACGC +
Preference number: 2 (lower is better)
Translates to: RMTNRMLMAFSAKVMGPSWRCPR*WRSSTR
Trigger: GCGTGTGCTACTCCGCCAGCATCGGGGGCATCGCCA...GCTGGGCCCCATGACCTTTGCAGAAAAGGCCATCAGCATCCTATTCGTCATCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR GCA 90 bp CATAATTATGCCGATGAAGATGGCCACTGTCCCATCGGACACCATGCTCTCCCCCCAGGTTGGGTGCGGTaGCAGTCAGCGTGGCGATGC +
Preference number: 2 (lower is better)
Translates to: HNYADEDGHCPIGHHALPPGWVR*QSAWRC
Trigger: GCATCGCCACGCTGACTGGCACCGCACCCAACCTGG...GGGGAGAGCATGGTGTCCGATGGGACAGTGGCCATCTTCATCGGCATAATTATG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR GCA 90 bp CCGATCGCTCACTGCCCTTGGCCAGGGCATAGCCACCACCCAGCAATAACACGAGATGACGCAGTAGGCTaGCTGCTGTTGCTCCTGCAT +
Preference number: 2 (lower is better)
Translates to: PIAHCPWPGHSHHPAITRDDAVG*LLLLLH
Trigger: ATGCAGGAGCAACAGCAGGCAGCCTACTGCGTCATC...TCGTGTTATTGCTGGGTGGTGGCTATGCCCTGGCCAAGGGCAGTGAGCGATCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CCA 90 bp TGTCCCATCGGACACCATGCTCTCCCCCTTGGCATTGGGAAAAGCCAAATTGCCTGCGAGCTGTGCAGCTaGTCCAGGACGGCATGTGCG +
Preference number: 2 (lower is better)
Translates to: CPIGHHALPLGIGKSQIACELCS*SRTACA
Trigger: CGCACATGCCGTCCTGGACCAGCTGCACAGCTCGCA...GGCAATTTGGCTTTTCCCAATGCCAAGGGGGAGAGCATGGTGTCCGATGGGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CCA 90 bp GCCGTTTTGGGGGAAGAGCGAGTTGATCTGGCCTTGCAGCACCAGGTTGGGTGCCTCCTTCTGGGGACTTaGTTCCTGGAGCTCGAAGGT +
Preference number: 2 (lower is better)
Translates to: AVLGEERVDLALQHQVGCLLLGT*FLELEG
Trigger: ACCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGGAG...GCACCCAACCTGGTGCTGCAAGGCCAGATCAACTCGCTCTTCCCCCAAAACGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CCA 90 bp GCTCACTGCCCTTGGCCAGGGCATAGCCACCACCCAGCAATAACACGATATTCCGGCAATGGCTGGAGCTaGCACACTCTGCAGTGGGGT +
Preference number: 2 (lower is better)
Translates to: AHCPWPGHSHHPAITRYSGNGWS*HTLQWG
Trigger: ACCCCACTGCAGAGTGTGCCAGCTCCAGCCATTGCC...GGAATATCGTGTTATTGCTGGGTGGTGGCTATGCCCTGGCCAAGGGCAGTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR TCA 90 bp GCTGGCTTGCGAGCTGTGCAGCTGGTCCAGGACGGCATGTGCGATGGGCACCATGATGGAAATGGTCTCTaGATGATCTCAGAGGCATCC +
Preference number: 2 (lower is better)
Translates to: AGLRAVQLVQDGMCDGHHDGNGL*MISEAS
Trigger: GGATGCCTCTGAGATCATTCAGAGACCATTTCCATC...ATGGTGCCCATCGCACATGCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459818.2
3UTR-3UTR TCA 90 bp CATAGCCACCACCCAGCAATAACACGATATTCCACGGCATCTTCTGGTTCACCGCCGAAGAGGCAGACGTaGCAGGGAGGGCCTGCCCAT +
Preference number: 2 (lower is better)
Translates to: HSHHPAITRYSTASSGSPPKRQT*QGGPAH
Trigger: ATGGGCAGGCCCTCCCTGTCACGTCTGCCTCTTCGG...CGGTGAACCAGAAGATGCCGTGGAATATCGTGTTATTGCTGGGTGGTGGCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR GCA 90 bp GCTCACTGCCCTTGGCCAGGGCATAGCCACCACCCAGCAATAACACGATATTCCGAGTTGATCTGGCCTTaGAGCACCAGGTTGGGTGCG +
Preference number: 2 (lower is better)
Translates to: AHCPWPGHSHHPAITRYSELIWP*STRLGA
Trigger: CGCACCCAACCTGGTGCTGCAAGGCCAGATCAACTC...GGAATATCGTGTTATTGCTGGGTGGTGGCTATGCCCTGGCCAAGGGCAGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR GCA 90 bp CATGGGGCCCAGCAGCCTGTGCTCGGTCTGGATGACGCAGTAGGCTGCCTGCTGGCATCTTTTCCCCAATaGCAAAGTTCTTCCGGAAGT +
Preference number: 2 (lower is better)
Translates to: HGAQQPVLGLDDAVGCLLASFPQ*QSSSGS
Trigger: ACTTCCGGAAGAACTTTGGCATTGGGGAAAAGATGC...CAGCAGGCAGCCTACTGCGTCATCCAGACCGAGCACAGGCTGCTGGGCCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR GCA 90 bp GACTCCAATGATGTTGAGGAGGAATCCTGCCCGGGCCATATCCAACACTTTGAGGGCCCGATCGCTCACTaGCCTTGGCCAGGGCATAGC +
Preference number: 2 (lower is better)
Translates to: DSNDVEEESCPGHIQHFEGPIAH*PWPGHS
Trigger: GCTATGCCCTGGCCAAGGGCAGTGAGCGATCGGGCC...CTCAAAGTGTTGGATATGGCCCGGGCAGGATTCCTCCTCAACATCATTGGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CCA 90 bp TCCCATAGACAAGCCTGGGGAACCTTCATCCCCCACCAAGTGTTACCTCCTGTTTGCGAGCTGTGCAGCTaGTCCAGGACGGCATGTGCG +
Preference number: 2 (lower is better)
Translates to: SHRQAWGTFIPHQVLPPVCELCS*SRTACA
Trigger: CGCACATGCCGTCCTGGACCAGCTGCACAGCTCGCA...AACAGGAGGTAACACTTGGTGGGGGATGAAGGTTCCCCAGGCTTGTCTATGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577903.5
3UTR-3UTR CCA 90 bp CCGATCGCTCACTGCCCTTGGCCAGGGCATAGCCACCACCCAGCAATAACACGAGCCCATTATCAAGCTTaGTCACCTCCTTCTGGGGAC +
Preference number: 2 (lower is better)
Translates to: PIAHCPWPGHSHHPAITRAHYQA*SPPSGD
Trigger: GTCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGC...TCGTGTTATTGCTGGGTGGTGGCTATGCCCTGGCCAAGGGCAGTGAGCGATCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CCA 90 bp CAGTGCGATGATCAGGACTCCAATGATGTTGAGGAGGAATCCTGCCCGGGCCATAGATGGCCTGGGCCATaGAGGCTAGGATGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: QCDDQDSNDVEEESCPGHRWPGP*RLGWAG
Trigger: TCCTGCCCATCCTAGCCTCCATGGCCCAGGCCATCT...ATGGCCCGGGCAGGATTCCTCCTCAACATCATTGGAGTCCTGATCATCGCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CCA 90 bp GAGGGTATGATGAACATAATTATGCCGATGAAGATGGCCACTGTCCCATCGGACGGGCGCGGGGAGGGCTaGGTTAGCCGCTTGGGGTTG +
Preference number: 2 (lower is better)
Translates to: EGMMNIIMPMKMATVPSDGRGEG*VSRLGL
Trigger: CAACCCCAAGCGGCTAACCCAGCCCTCCCCGCGCCC...GTCCGATGGGACAGTGGCCATCTTCATCGGCATAATTATGTTCATCATACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577903.5
3UTR CAA 90 bp CTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGCCTTaGGCCTGGAGCTTGGAGCTTGGAGCTTGGGGTGTCCCCTCCGGG +
Preference number: 2 (lower is better)
Translates to: LTDTQEIMYTRAFQP*AWSLELGAWGVPSG
Trigger: CCCGGAGGGGACACCCCAAGCTCCAAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR TCA 90 bp CAGCCCTGGGAACTTGGAGGGTATGATGAACATAATTATGCCGATGAAGATGGCGCCGCACCCCAACGATaGGGAGGACACGGAGGGCGA +
Preference number: 2 (lower is better)
Translates to: QPWELGGYDEHNYADEDGAAPQR*GGHGGR
Trigger: TCGCCCTCCGTGTCCTCCTCATCGTTGGGGTGCGGC...GCCATCTTCATCGGCATAATTATGTTCATCATACCCTCCAAGTTCCCAGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR TCA 90 bp TGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACGGAGATGCTTCTGGCTaGGATGTGCCCTCCCCTCCG +
Preference number: 2 (lower is better)
Translates to: CRRTHMRTHTCTHLLFQHGDASG*DVPSPP
Trigger: CGGAGGGGAGGGCACATCTCAGCCAGAAGCATCTCC...GTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR TCA 90 bp CCAGGGCATAGCCACCACCCAGCAATAACACGATATTCCACGGCATCTTCTGGTGTTTCCCAGCCACTCTaGCAGGCCCGATCGCTCACT +
Preference number: 2 (lower is better)
Translates to: PGHSHHPAITRYSTASSGVSQPL*QARSLT
Trigger: AGTGAGCGATCGGGCCTGTCAGAGTGGCTGGGAAAC...ACCAGAAGATGCCGTGGAATATCGTGTTATTGCTGGGTGGTGGCTATGCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR GCA 90 bp CCAGGGCATAGCCACCACCCAGCAATAACACGATATTCCACGGCATCTTCTGGTGTCCAGGACGGCATGTaGGATGGGCACCATCATGGC +
Preference number: 2 (lower is better)
Translates to: PGHSHHPAITRYSTASSGVQDGM*DGHHHG
Trigger: GCCATGATGGTGCCCATCGCACATGCCGTCCTGGAC...ACCAGAAGATGCCGTGGAATATCGTGTTATTGCTGGGTGGTGGCTATGCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR GCA 90 bp AGGATGACGAATAGGATGCTGATGGCCTTTTCTGCAAAGGTCATGGGGCCCAGCTGCCCTCCTCGACGTTaGTGCTGGCTTGCGAGCTGT +
Preference number: 2 (lower is better)
Translates to: RMTNRMLMAFSAKVMGPSCPPRR*CWLASC
Trigger: ACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCA...GCTGGGCCCCATGACCTTTGCAGAAAAGGCCATCAGCATCCTATTCGTCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR GCA 90 bp CCAGGGCATAGCCACCACCCAGCAATAACACGATATTCCACGGCATCTTCTGGTCTTCTGGCTGAGATGTaGCCTCCCCTCCGAAGAGGC +
Preference number: 2 (lower is better)
Translates to: PGHSHHPAITRYSTASSGLLAEM*PPLRRG
Trigger: GCCTCTTCGGAGGGGAGGGCACATCTCAGCCAGAAG...ACCAGAAGATGCCGTGGAATATCGTGTTATTGCTGGGTGGTGGCTATGCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR GCA 90 bp CATAATTATGCCGATGAAGATGGCCACTGTCCCATCGGACACCATGCTCTCCCCCCCAGGAAGAGGATCTaGAGCCACAACCAGGCCAGC +
Preference number: 2 (lower is better)
Translates to: HNYADEDGHCPIGHHALPPRKRI*SHNQAS
Trigger: GCTGGCCTGGTTGTGGCTGCAGATCCTCTTCCTGGG...GGGGAGAGCATGGTGTCCGATGGGACAGTGGCCATCTTCATCGGCATAATTATG
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR GCA 90 bp GAAGAGGGGGATGCCCCAGCTGTTGATGGCCAGTGCGATGATCAGGACTCCAATGATGACGCAGTAGGCTaGCTGCTGTTGCTCCTGCAT +
Preference number: 2 (lower is better)
Translates to: EEGDAPAVDGQCDDQDSNDDAVG*LLLLLH
Trigger: ATGCAGGAGCAACAGCAGGCAGCCTACTGCGTCATC...ATTGGAGTCCTGATCATCGCACTGGCCATCAACAGCTGGGGCATCCCCCTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR GCA 90 bp CAGTGCGATGATCAGGACTCCAATGATGTTGAGGAGGAATCCTGCCCGGGCCATTCCCATCGGACACCATaGTCTCCCCCTTGGCATTGG +
Preference number: 2 (lower is better)
Translates to: QCDDQDSNDVEEESCPGHSHRTP*SPPWHW
Trigger: CCAATGCCAAGGGGGAGAGCATGGTGTCCGATGGGA...ATGGCCCGGGCAGGATTCCTCCTCAACATCATTGGAGTCCTGATCATCGCACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR GCA 90 bp CAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTGGCCCGATCGCTCACTaGCCTTGGCCAGGGCATAGC +
Preference number: 2 (lower is better)
Translates to: QEIMYTRAFQPLAWSLELGPIAH*PWPGHS
Trigger: GCTATGCCCTGGCCAAGGGCAGTGAGCGATCGGGCC...AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CCA 90 bp GACTCCAATGATGTTGAGGAGGAATCCTGCCCGGGCCATATCCAACACTTTGAGGGAGTGGGAATGGGGTaGGTCTTCCTGGGCATGGCC +
Preference number: 2 (lower is better)
Translates to: DSNDVEEESCPGHIQHFEGVGMG*VFLGMA
Trigger: GGCCATGCCCAGGAAGACCCACCCCATTCCCACTCC...CTCAAAGTGTTGGATATGGCCCGGGCAGGATTCCTCCTCAACATCATTGGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CCA 90 bp CATAGCCACCACCCAGCAATAACACGATATTCCACGGCATCTTCTGGTTCACCGGGAGTGGGAATGGGGTaGGTCTTCCTGGGCATGGCC +
Preference number: 2 (lower is better)
Translates to: HSHHPAITRYSTASSGSPGVGMG*VFLGMA
Trigger: GGCCATGCCCAGGAAGACCCACCCCATTCCCACTCC...CGGTGAACCAGAAGATGCCGTGGAATATCGTGTTATTGCTGGGTGGTGGCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CCA 90 bp TTTAATGTGACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCCTTTGGCCTGGAGCTTaGAGCTTGGAGCTTGGGGTG +
Preference number: 2 (lower is better)
Translates to: FNVTLTAQRLFPWQLLAGLWPGA*SLELGV
Trigger: CACCCCAAGCTCCAAGCTCCAAGCTCCAGGCCAAAG...GCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTCACATTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
3UTR-3UTR CCA 90 bp AGGATGACGAATAGGATGCTGATGGCCTTTTCTGCAAAGGTCATGGGGCCCAGCGGACGGCATGTGCGATaGGCACCATCATGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: RMTNRMLMAFSAKVMGPSGRHVR*APSWLR
Trigger: CCTCAGCCATGATGGTGCCCATCGCACATGCCGTCC...GCTGGGCCCCATGACCTTTGCAGAAAAGGCCATCAGCATCCTATTCGTCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CCA 90 bp CGCAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCCCTCGACGTTGCTGCTaGCTTGCGAGCTGTGCAGCT +
Preference number: 2 (lower is better)
Translates to: RKRLCTHVPFSLWPGAWSPRRCC*LASCAA
Trigger: AGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGG...GCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CCA 90 bp CCCACCAAGTGTTACCTCCTGTTCTGCAATGGGGGCCCTATACCCTTCCCTCCTTTTCTGCAAAGGTCATaGGGCCCAGCAGCCTGTGCT +
Preference number: 2 (lower is better)
Translates to: PTKCYLLFCNGGPIPFPPFLQRS*GPAACA
Trigger: AGCACAGGCTGCTGGGCCCCATGACCTTTGCAGAAA...AGGAGGGAAGGGTATAGGGCCCCCATTGCAGAACAGGAGGTAACACTTGGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577903.5
3UTR CAA 90 bp CAGCAGCCTGTGCTCGGTCTGGATGACGCAGTAGGCTGCCTGCTGTaGCTCCTGCATCTTTTCCCCAATGCCAAAGTTCTTCCGGAAGTT +
Preference number: 2 (lower is better)
Translates to: QQPVLGLDDAVGCLL*LLHLFPNAKVLPEV
Trigger: AACTTCCGGAAGAACTTTGGCATTGGGGAAAAGATGCAGGAGCAACAGCAGGCAGCCTACTGCGTCATCCAGACCGAGCACAGGCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR CAA 90 bp CCCCAGCTGTTGATGGCCAGTGCGATGATCAGGACTCCAATGATGTaGAGGAGGAATCCTGCCCGGGCCATATCCAACACTTTGAGGTCC +
Preference number: 2 (lower is better)
Translates to: PQLLMASAMIRTPMM*RRNPARAISNTLRS
Trigger: GGACCTCAAAGTGTTGGATATGGCCCGGGCAGGATTCCTCCTCAACATCATTGGAGTCCTGATCATCGCACTGGCCATCAACAGCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR TCA 90 bp CCAGGGCATAGCCACCACCCAGCAATAACACGATATTCCACGGCATCTTCTGGTGGAGGGTGGTGGAGATaGGCCTCTCCCATAGACAAG +
Preference number: 2 (lower is better)
Translates to: PGHSHHPAITRYSTASSGGGWWR*ASPIDK
Trigger: CTTGTCTATGGGAGAGGCTCATCTCCACCACCCTCC...ACCAGAAGATGCCGTGGAATATCGTGTTATTGCTGGGTGGTGGCTATGCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577903.5
3UTR-3UTR GCA 90 bp CCTTCTGGGGACTTGGTTCCTGGAGCTCGAAGGTGGGGTTGTTGCTGCCCTCCTGATTATGTACACACGTaGCTTTCAGCCTTTGGCCTG +
Preference number: 2 (lower is better)
Translates to: PSGDLVPGARRWGCCCPPDYVHT*LSAFGL
Trigger: CAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATC...AGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR GCA 90 bp CGCAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCCACCCCTCACATCCATaGAGGCGCACACATATGCGC +
Preference number: 2 (lower is better)
Translates to: RKRLCTHVPFSLWPGAWSHPSHP*RRTHMR
Trigger: GCGCATATGTGTGCGCCTGCATGGATGTGAGGGGTG...GCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR GCA 90 bp CCCACCAAGTGTTACCTCCTGTTCTGCAATGGGGGCCCTATACCCTTCCCTCCTAGGGCGATGCGTTTATaGAGGTTCCAGTGTTCCACC +
Preference number: 2 (lower is better)
Translates to: PTKCYLLFCNGGPIPFPPRAMRL*RFQCST
Trigger: GGTGGAACACTGGAACCTGCATAAACGCATCGCCCT...AGGAGGGAAGGGTATAGGGCCCCCATTGCAGAACAGGAGGTAACACTTGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577903.5
3UTR-3UTR GCA 90 bp GCTCACTGCCCTTGGCCAGGGCATAGCCACCACCCAGCAATAACACGATATTCCAGGGCGATGCGTTTATaGAGGTTCCAGTGTTCCACC +
Preference number: 2 (lower is better)
Translates to: AHCPWPGHSHHPAITRYSRAMRL*RFQCST
Trigger: GGTGGAACACTGGAACCTGCATAAACGCATCGCCCT...GGAATATCGTGTTATTGCTGGGTGGTGGCTATGCCCTGGCCAAGGGCAGTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR GCA 90 bp CAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTCTGGCTTGCGAGCTGTaGAGCTGGTCCAGGACGGCA +
Preference number: 2 (lower is better)
Translates to: QEIMYTRAFQPLAWSLELLACEL*SWSRTA
Trigger: TGCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAG...AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR GCA 90 bp TGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACCCTCCTCGACGTTGCTaGTGGCTTGCGAGCTGTGCA +
Preference number: 2 (lower is better)
Translates to: CRRTHMRTHTCTHLLFQHPPRRC*WLASCA
Trigger: TGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGG...GTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR GCA 90 bp CAGTGCGATGATCAGGACTCCAATGATGTTGAGGAGGAATCCTGCCCGGGCCATCGAAGTTCACCACGTTaGCGTTTTGGGGGAAGAGCG +
Preference number: 2 (lower is better)
Translates to: QCDDQDSNDVEEESCPGHRSSPR*RFGGRA
Trigger: CGCTCTTCCCCCAAAACGGCAACGTGGTGAACTTCG...ATGGCCCGGGCAGGATTCCTCCTCAACATCATTGGAGTCCTGATCATCGCACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR GCA 90 bp TGTCCCATCGGACACCATGCTCTCCCCCTTGGCATTGGGAAAAGCCAAATTGCCGCTGATGGCCTTTTCTaGAAAGGTCATGGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: CPIGHHALPLGIGKSQIAADGLF*KGHGAQ
Trigger: CTGGGCCCCATGACCTTTGCAGAAAAGGCCATCAGC...GGCAATTTGGCTTTTCCCAATGCCAAGGGGGAGAGCATGGTGTCCGATGGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CCA 90 bp AAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTGCCGGGCTCAGAGGAGTaGGAATGGGGTGGGTCTTCC +
Preference number: 2 (lower is better)
Translates to: KRLCTHVPFSLWPGAWSLPGSEE*EWGGSS
Trigger: GGAAGACCCACCCCATTCCCACTCCTCTGAGCCCGG...CAAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CCA 90 bp CACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGAGCTTGGAGCTTaGGGTGTCCCCTCCGGGCTC +
Preference number: 2 (lower is better)
Translates to: HPFLTDTQEIMYTRAFQPLELGA*GVPSGL
Trigger: GAGCCCGGAGGGGACACCCCAAGCTCCAAGCTCCAA...AGGCTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CCA 90 bp CAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTTTGGAGCTTGGAGCTTaGGGTGTCCCCTCCGGGCTC +
Preference number: 2 (lower is better)
Translates to: QEIMYTRAFQPLAWSLELLELGA*GVPSGL
Trigger: GAGCCCGGAGGGGACACCCCAAGCTCCAAGCTCCAA...AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CCA 90 bp CCAAGTGTTACCTCCTGTTCTGCAATGGGGGCCCTATACCCTTCCCTCCTTCCCATGCACTGGGTGAGGTaGAGATGCTTCTGGCTGAGA +
Preference number: 2 (lower is better)
Translates to: PSVTSCSAMGALYPSLLPMHWVR*RCFWLR
Trigger: TCTCAGCCAGAAGCATCTCCACCTCACCCAGTGCAT...GGGAAGGAGGGAAGGGTATAGGGCCCCCATTGCAGAACAGGAGGTAACACTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577903.5
3UTR-3UTR CCA 90 bp AACCAGGAGGCGAAGTTCACCACGTTGCCGTTTTGGGGGAAGAGCGAGTTGATCCACAGGCTCATGCACTaGGTGAGGTGGAGATGCTTC +
Preference number: 2 (lower is better)
Translates to: NQEAKFTTLPFWGKSELIHRLMH*VRWRCF
Trigger: GAAGCATCTCCACCTCACCCAGTGCATGAGCCTGTG...GATCAACTCGCTCTTCCCCCAAAACGGCAACGTGGTGAACTTCGCCTCCTGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CCA 90 bp TGTCCCATCGGACACCATGCTCTCCCCCTTGGCATTGGGAAAAGCCAAATTGCCCACAGGCTCATGCACTaGGTGAGGTGGAGATGCTTC +
Preference number: 2 (lower is better)
Translates to: CPIGHHALPLGIGKSQIAHRLMH*VRWRCF
Trigger: GAAGCATCTCCACCTCACCCAGTGCATGAGCCTGTG...GGCAATTTGGCTTTTCCCAATGCCAAGGGGGAGAGCATGGTGTCCGATGGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CCA 90 bp CAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTCTTGCAGCACCAGGTTaGGTGCGGTGCCAGTCAGCG +
Preference number: 2 (lower is better)
Translates to: QEIMYTRAFQPLAWSLELLAAPG*VRCQSA
Trigger: CGCTGACTGGCACCGCACCCAACCTGGTGCTGCAAG...AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CCA 90 bp GCTCACTGCCCTTGGCCAGGGCATAGCCACCACCCAGCAATAACACGATATTCCTCTCCCCCTTGGCATTaGGAAAAGCCAAATTGCCCC +
Preference number: 2 (lower is better)
Translates to: AHCPWPGHSHHPAITRYSSPPWH*EKPNCP
Trigger: GGGGCAATTTGGCTTTTCCCAATGCCAAGGGGGAGA...GGAATATCGTGTTATTGCTGGGTGGTGGCTATGCCCTGGCCAAGGGCAGTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR GCA 90 bp TGCATCTTTTCCCCAATGCCAAAGTTCTTCCGGAAGTTGAAGCCCAGGAAGAGGGTCCAGGACGGCATGTaGGATGGGCACCATCATGGC +
Preference number: 2 (lower is better)
Translates to: CIFSPMPKFFRKLKPRKRVQDGM*DGHHHG
Trigger: GCCATGATGGTGCCCATCGCACATGCCGTCCTGGAC...CCTCTTCCTGGGCTTCAACTTCCGGAAGAACTTTGGCATTGGGGAAAAGATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR GCA 90 bp GAGGGTATGATGAACATAATTATGCCGATGAAGATGGCCACTGTCCCATCGGACCTGGCTTGCGAGCTGTaGAGCTGGTCCAGGACGGCA +
Preference number: 2 (lower is better)
Translates to: EGMMNIIMPMKMATVPSDLACEL*SWSRTA
Trigger: TGCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAG...GTCCGATGGGACAGTGGCCATCTTCATCGGCATAATTATGTTCATCATACCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR GCA 90 bp CAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTAGGTGGGGTTGTTGCTaGCCTCCTCGACGTTGCTGC +
Preference number: 2 (lower is better)
Translates to: QEIMYTRAFQPLAWSLELRWGCC*PPRRCC
Trigger: GCAGCAACGTCGAGGAGGGCAGCAACAACCCCACCT...AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR GCA 90 bp TGCATCTTTTCCCCAATGCCAAAGTTCTTCCGGAAGTTGAAGCCCAGGAAGAGGCTTCTGGCTGAGATGTaGCCTCCCCTCCGAAGAGGC +
Preference number: 2 (lower is better)
Translates to: CIFSPMPKFFRKLKPRKRLLAEM*PPLRRG
Trigger: GCCTCTTCGGAGGGGAGGGCACATCTCAGCCAGAAG...CCTCTTCCTGGGCTTCAACTTCCGGAAGAACTTTGGCATTGGGGAAAAGATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR GCA 90 bp TCCCATAGACAAGCCTGGGGAACCTTCATCCCCCACCAAGTGTTACCTCCTGTTCGAAGTTCACCACGTTaGCGTTTTGGGGGAAGAGCG +
Preference number: 2 (lower is better)
Translates to: SHRQAWGTFIPHQVLPPVRSSPR*RFGGRA
Trigger: CGCTCTTCCCCCAAAACGGCAACGTGGTGAACTTCG...AACAGGAGGTAACACTTGGTGGGGGATGAAGGTTCCCCAGGCTTGTCTATGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000577903.5
3UTR-3UTR CCA 90 bp CAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTCTGGAGCTTGGAGCTTaGAGCTTGGGGTGTCCCCTC +
Preference number: 2 (lower is better)
Translates to: QEIMYTRAFQPLAWSLELLELGA*SLGCPL
Trigger: GAGGGGACACCCCAAGCTCCAAGCTCCAAGCTCCAG...AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CCA 90 bp GACTCCAATGATGTTGAGGAGGAATCCTGCCCGGGCCATATCCAACACTTTGAGAGGTGGAGATGCTTCTaGCTGAGATGTGCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: DSNDVEEESCPGHIQHFERWRCF*LRCALP
Trigger: GGGGAGGGCACATCTCAGCCAGAAGCATCTCCACCT...CTCAAAGTGTTGGATATGGCCCGGGCAGGATTCCTCCTCAACATCATTGGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CCA 90 bp TGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACCGAAAGAGAAGACGATaGCATTGGGCGGGGTGGCCA +
Preference number: 2 (lower is better)
Translates to: CRRTHMRTHTCTHLLFQHRKRRR*HWAGWP
Trigger: TGGCCACCCCGCCCAATGCCATCGTCTTCTCTTTCG...GTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR TCA 90 bp GCTCACTGCCCTTGGCCAGGGCATAGCCACCACCCAGCAATAACACGATATTCCAGTAGGCCTCTCTGCTaGTTCAGGAAGAAGTTTCTG +
Preference number: 2 (lower is better)
Translates to: AHCPWPGHSHHPAITRYSSRPLC*FRKKFL
Trigger: CAGAAACTTCTTCCTGAATCAGCAGAGAGGCCTACT...GGAATATCGTGTTATTGCTGGGTGGTGGCTATGCCCTGGCCAAGGGCAGTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR TCA 90 bp CGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACATAGGAGTTTCCCAGCCACTCTaGCAGGCCCGATCGCTCACT +
Preference number: 2 (lower is better)
Translates to: RTHMRTHTCTHLLFQHIGVSQPL*QARSLT
Trigger: AGTGAGCGATCGGGCCTGTCAGAGTGGCTGGGAAAC...TCCTATGTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR GCA 90 bp GAGGGTATGATGAACATAATTATGCCGATGAAGATGGCCACTGTCCCATCGGACTGCCCTCCTCGACGTTaGTGCTGGCTTGCGAGCTGT +
Preference number: 2 (lower is better)
Translates to: EGMMNIIMPMKMATVPSDCPPRR*CWLASC
Trigger: ACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCA...GTCCGATGGGACAGTGGCCATCTTCATCGGCATAATTATGTTCATCATACCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR GCA 90 bp GAGGGTATGATGAACATAATTATGCCGATGAAGATGGCCACTGTCCCATCGGACCTTCTGGCTGAGATGTaGCCTCCCCTCCGAAGAGGC +
Preference number: 2 (lower is better)
Translates to: EGMMNIIMPMKMATVPSDLLAEM*PPLRRG
Trigger: GCCTCTTCGGAGGGGAGGGCACATCTCAGCCAGAAG...GTCCGATGGGACAGTGGCCATCTTCATCGGCATAATTATGTTCATCATACCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR GCA 90 bp CAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTTCCCATCGGACACCATaGTCTCCCCCTTGGCATTGG +
Preference number: 2 (lower is better)
Translates to: QEIMYTRAFQPLAWSLELSHRTP*SPPWHW
Trigger: CCAATGCCAAGGGGGAGAGCATGGTGTCCGATGGGA...AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CCA 90 bp ATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGGGAGTGGGAATGGGGTaGGTCTTCCTGGGCATGGCC +
Preference number: 2 (lower is better)
Translates to: IHPFLTDTQEIMYTRAFQGVGMG*VFLGMA
Trigger: GGCCATGCCCAGGAAGACCCACCCCATTCCCACTCC...CTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CCA 90 bp CATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCATTGGAGCTTGGAGCTTaGGGTGTCCCCTCCGGGCTC +
Preference number: 2 (lower is better)
Translates to: HTPLPYRHARDYVHTCLSLELGA*GVPSGL
Trigger: GAGCCCGGAGGGGACACCCCAAGCTCCAAGCTCCAA...TGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CCA 90 bp CGGGTGAACCAGAGCAGCACCAGGATGACGAATAGGATGCTGATGGCCTTTTCTTTTCAGCCTTTGGCCTaGAGCTTGGAGCTTGGAGCT +
Preference number: 2 (lower is better)
Translates to: RVNQSSTRMTNRMLMAFSFQPLA*SLELGA
Trigger: AGCTCCAAGCTCCAAGCTCCAGGCCAAAGGCTGAAA...AGAAAAGGCCATCAGCATCCTATTCGTCATCCTGGTGCTGCTCTGGTTCACCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CCA 90 bp GAGGGTATGATGAACATAATTATGCCGATGAAGATGGCCACTGTCCCATCGGACCCTGGAGCTCGAAGGTaGGGTTGTTGCTGCCCTCCT +
Preference number: 2 (lower is better)
Translates to: EGMMNIIMPMKMATVPSDPGARR*GCCCPP
Trigger: AGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGG...GTCCGATGGGACAGTGGCCATCTTCATCGGCATAATTATGTTCATCATACCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CCA 90 bp CACCCAGCAATAACACGATATTCCACGGCATCTTCTGGTTCACCGTCTTCCAGTAGGTGGAGATGCTTCTaGCTGAGATGTGCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: HPAITRYSTASSGSPSSSRWRCF*LRCALP
Trigger: GGGGAGGGCACATCTCAGCCAGAAGCATCTCCACCT...ACTGGAAGACGGTGAACCAGAAGATGCCGTGGAATATCGTGTTATTGCTGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CCA 90 bp AGGATGACGAATAGGATGCTGATGGCCTTTTCTGCAAAGGTCATGGGGCCCAGCAAGAGCGAGTTGATCTaGCCTTGCAGCACCAGGTTG +
Preference number: 2 (lower is better)
Translates to: RMTNRMLMAFSAKVMGPSKSELI*PCSTRL
Trigger: CAACCTGGTGCTGCAAGGCCAGATCAACTCGCTCTT...GCTGGGCCCCATGACCTTTGCAGAAAAGGCCATCAGCATCCTATTCGTCATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CCA 90 bp AGGATGACGAATAGGATGCTGATGGCCTTTTCTGCAAAGGTCATGGGGCCCAGCACCACGTTGCCGTTTTaGGGGAAGAGCGAGTTGATC +
Preference number: 2 (lower is better)
Translates to: RMTNRMLMAFSAKVMGPSTTLPF*GKSELI
Trigger: GATCAACTCGCTCTTCCCCCAAAACGGCAACGTGGT...GCTGGGCCCCATGACCTTTGCAGAAAAGGCCATCAGCATCCTATTCGTCATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CCA 90 bp CAGTGCGATGATCAGGACTCCAATGATGTTGAGGAGGAATCCTGCCCGGGCCATCCATGCTCTCCCCCTTaGCATTGGGAAAAGCCAAAT +
Preference number: 2 (lower is better)
Translates to: QCDDQDSNDVEEESCPGHPCSPP*HWEKPN
Trigger: ATTTGGCTTTTCCCAATGCCAAGGGGGAGAGCATGG...ATGGCCCGGGCAGGATTCCTCCTCAACATCATTGGAGTCCTGATCATCGCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR GCA 90 bp CAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTGGGGCACCAGAGAGGGATTATGTACACACGTaGCTTTCAGCCTTTGGCCTG +
Preference number: 2 (lower is better)
Translates to: QVSLVTKLGIPRPGAPERDYVHT*LSAFGL
Trigger: CAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATC...CCTCTCTGGTGCCCCAGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR GCA 90 bp TTTAATGTGACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCGATTATGTACACACGTaGCTTTCAGCCTTTGGCCTG +
Preference number: 2 (lower is better)
Translates to: FNVTLTAQRLFPWQLLAGDYVHT*LSAFGL
Trigger: CAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATC...GCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTCACATTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
3UTR-3UTR CCA 90 bp CGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACATAGGACTTTGGCCTGGAGCTTaGAGCTTGGAGCTTGGGGTG +
Preference number: 2 (lower is better)
Translates to: RTHMRTHTCTHLLFQHIGLWPGA*SLELGV
Trigger: CACCCCAAGCTCCAAGCTCCAAGCTCCAGGCCAAAG...TCCTATGTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CCA 90 bp CACCCAGCAATAACACGATATTCCACGGCATCTTCTGGTTCACCGTCTTCCAGTAACATTCCCACAGACTaGCATTCCCCTGGGCTCTCG +
Preference number: 2 (lower is better)
Translates to: HPAITRYSTASSGSPSSSNIPTD*HSPGLS
Trigger: CGAGAGCCCAGGGGAATGCCAGTCTGTGGGAATGTT...ACTGGAAGACGGTGAACCAGAAGATGCCGTGGAATATCGTGTTATTGCTGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459818.2
3UTR-3UTR CCA 90 bp ATGATGAACATAATTATGCCGATGAAGATGGCCACTGTCCCATCGGACACCATGCCTGGAGCTCGAAGGTaGGGTTGTTGCTGCCCTCCT +
Preference number: 2 (lower is better)
Translates to: MMNIIMPMKMATVPSDTMPGARR*GCCCPP
Trigger: AGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGG...CATGGTGTCCGATGGGACAGTGGCCATCTTCATCGGCATAATTATGTTCATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CCA 90 bp GAGGGTATGATGAACATAATTATGCCGATGAAGATGGCCACTGTCCCATCGGACGGCCTTCAGCTTCCCTaGGTTTTCTGGGTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: EGMMNIIMPMKMATVPSDGLQLP*VFWVLG
Trigger: ACCCAGGACCCAGAAAACCCAGGGAAGCTGAAGGCC...GTCCGATGGGACAGTGGCCATCTTCATCGGCATAATTATGTTCATCATACCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR CAA 90 bp TTCAGCTTCCCTGGGTTTTCTGGGTCCTGGGTCAGCCCTGGGAACTaGGAGGGTATGATGAACATAATTATGCCGATGAAGATGGCCACT +
Preference number: 2 (lower is better)
Translates to: FSFPGFSGSWVSPGN*EGMMNIIMPMKMAT
Trigger: AGTGGCCATCTTCATCGGCATAATTATGTTCATCATACCCTCCAAGTTCCCAGGGCTGACCCAGGACCCAGAAAACCCAGGGAAGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR TCA 90 bp CAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTGGGGCACCAGAGAGGATGTTGTATTGTCTGTaGACACACACGTGTGCACTG +
Preference number: 2 (lower is better)
Translates to: QVSLVTKLGIPRPGAPERMLYCL*THTCAL
Trigger: CAGTGCACACGTGTGTGTTCACAGACAATACAACAT...CCTCTCTGGTGCCCCAGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR TCA 90 bp GAAGAGGGGGATGCCCCAGCTGTTGATGGCCAGTGCGATGATCAGGACTCCAATAGGCCACTCCAAGCCTaGATTTCAATAAATACAGTG +
Preference number: 2 (lower is better)
Translates to: EEGDAPAVDGQCDDQDSNRPLQA*ISINTV
Trigger: CACTGTATTTATTGAAATTCAGGCTTGGAGTGGCCT...ATTGGAGTCCTGATCATCGCACTGGCCATCAACAGCTGGGGCATCCCCCTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459818.2
3UTR-3UTR TCA 90 bp TCCCATAGACAAGCCTGGGGAACCTTCATCCCCCACCAAGTGTTACCTCCTGTTAGTAGGCCTCTCTGCTaGTTCAGGAAGAAGTTTCTG +
Preference number: 2 (lower is better)
Translates to: SHRQAWGTFIPHQVLPPVSRPLC*FRKKFL
Trigger: CAGAAACTTCTTCCTGAATCAGCAGAGAGGCCTACT...AACAGGAGGTAACACTTGGTGGGGGATGAAGGTTCCCCAGGCTTGTCTATGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577903.5
3UTR-3UTR GCA 90 bp TTTAATGTGACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCGTGAACACACACGTGTaGACTGTCCAACATACATAC +
Preference number: 2 (lower is better)
Translates to: FNVTLTAQRLFPWQLLAGVNTHV*TVQHTY
Trigger: GTATGTATGTTGGACAGTGCACACGTGTGTGTTCAC...GCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTCACATTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
3UTR-3UTR GCA 90 bp TTGGGGGAAGAGCGAGTTGATCTGGCCTTGCAGCACCAGGTTGGGTGCGGTGCCGCGTCATATTCTATGTaGTTCAAATGCTTTTACAAG +
Preference number: 2 (lower is better)
Translates to: LGEERVDLALQHQVGCGAASYSM*FKCFYK
Trigger: CTTGTAAAAGCATTTGAAGCACATAGAATATGACGC...GGCACCGCACCCAACCTGGTGCTGCAAGGCCAGATCAACTCGCTCTTCCCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR GCA 90 bp GAGGGTATGATGAACATAATTATGCCGATGAAGATGGCCACTGTCCCATCGGACCGAAGTTCACCACGTTaGCGTTTTGGGGGAAGAGCG +
Preference number: 2 (lower is better)
Translates to: EGMMNIIMPMKMATVPSDRSSPR*RFGGRA
Trigger: CGCTCTTCCCCCAAAACGGCAACGTGGTGAACTTCG...GTCCGATGGGACAGTGGCCATCTTCATCGGCATAATTATGTTCATCATACCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR GCA 90 bp GCATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCGATGACGCAGTAGGCTaGCTGCTGTTGCTCCTGCAT +
Preference number: 2 (lower is better)
Translates to: AYTPSLQTRKRLCTHVPFDDAVG*LLLLLH
Trigger: ATGCAGGAGCAACAGCAGGCAGCCTACTGCGTCATC...GAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR GCA 90 bp CGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACATAGGAGGAGCTGGCACACTCTaGAGTGGGGTCAGCTTGTTT +
Preference number: 2 (lower is better)
Translates to: RTHMRTHTCTHLLFQHIGGAGTL*SGVSLF
Trigger: AAACAAGCTGACCCCACTGCAGAGTGTGCCAGCTCC...TCCTATGTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CCA 90 bp TCAATAAATACAGTGCAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTGGAGTGGGAATGGGGTaGGTCTTCCTGGGCATGGCC +
Preference number: 2 (lower is better)
Translates to: SINTVQVSLVTKLGIPRPGVGMG*VFLGMA
Trigger: GGCCATGCCCAGGAAGACCCACCCCATTCCCACTCC...AGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTGCACTGTATTTATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CCA 90 bp ATGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCATTTCAGCCTTTGGCCTaGAGCTTGGAGCTTGGAGCT +
Preference number: 2 (lower is better)
Translates to: MQAHTYAHTHMHTPFIPAFQPLA*SLELGA
Trigger: AGCTCCAAGCTCCAAGCTCCAGGCCAAAGGCTGAAA...TGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CCA 90 bp CAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTTTTCAGCCTTTGGCCTaGAGCTTGGAGCTTGGAGCT +
Preference number: 2 (lower is better)
Translates to: QEIMYTRAFQPLAWSLELFQPLA*SLELGA
Trigger: AGCTCCAAGCTCCAAGCTCCAGGCCAAAGGCTGAAA...AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CCA 90 bp GAGGGTATGATGAACATAATTATGCCGATGAAGATGGCCACTGTCCCATCGGACTTGGTCACCTCCTTCTaGGGACTTGGTTCCTGGAGC +
Preference number: 2 (lower is better)
Translates to: EGMMNIIMPMKMATVPSDLVTSF*GLGSWS
Trigger: GCTCCAGGAACCAAGTCCCCAGAAGGAGGTGACCAA...GTCCGATGGGACAGTGGCCATCTTCATCGGCATAATTATGTTCATCATACCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CCA 90 bp GACTCCAATGATGTTGAGGAGGAATCCTGCCCGGGCCATATCCAACACTTTGAGCCATGCTCTCCCCCTTaGCATTGGGAAAAGCCAAAT +
Preference number: 2 (lower is better)
Translates to: DSNDVEEESCPGHIQHFEPCSPP*HWEKPN
Trigger: ATTTGGCTTTTCCCAATGCCAAGGGGGAGAGCATGG...CTCAAAGTGTTGGATATGGCCCGGGCAGGATTCCTCCTCAACATCATTGGAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CCA 90 bp GACTCCAATGATGTTGAGGAGGAATCCTGCCCGGGCCATATCCAACACTTTGAGCTCACCTCTCCCCCTTaGCATTGGGAAAAGCCAAAT +
Preference number: 2 (lower is better)
Translates to: DSNDVEEESCPGHIQHFELTSPP*HWEKPN
Trigger: ATTTGGCTTTTCCCAATGCCAAGGGGGAGAGGTGAG...CTCAAAGTGTTGGATATGGCCCGGGCAGGATTCCTCCTCAACATCATTGGAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577903.5
3UTR-3UTR TCA 90 bp TGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACCAGCACATAGGAAACTaGGCATACACCCCTTCCTTA +
Preference number: 2 (lower is better)
Translates to: CRRTHMRTHTCTHLLFQHQHIGN*AYTPSL
Trigger: TAAGGAAGGGGTGTATGCTCAGTTTCCTATGTGCTG...GTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR TCA 90 bp GACTCCAATGATGTTGAGGAGGAATCCTGCCCGGGCCATATCCAACACTTTGAGCAGCACATAGGAAACTaGGCATACACCCCTTCCTTA +
Preference number: 2 (lower is better)
Translates to: DSNDVEEESCPGHIQHFEQHIGN*AYTPSL
Trigger: TAAGGAAGGGGTGTATGCTCAGTTTCCTATGTGCTG...CTCAAAGTGTTGGATATGGCCCGGGCAGGATTCCTCCTCAACATCATTGGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR TCA 90 bp TGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACCCATATCCAACACTTTaGGGTCCCCGAAAGAGAAGA +
Preference number: 2 (lower is better)
Translates to: CRRTHMRTHTCTHLLFQHPYPTL*GPRKRR
Trigger: TCTTCTCTTTCGGGGACCTCAAAGTGTTGGATATGG...GTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR GCA 90 bp CTTGGAGGGTATGATGAACATAATTATGCCGATGAAGATGGCCACTGTCCCATCGTGACAGGGAGGGCCTaGCCATTATCAAGCTTGGTC +
Preference number: 2 (lower is better)
Translates to: LGGYDEHNYADEDGHCPIVTGRA*PLSSLV
Trigger: GACCAAGCTTGATAATGGGCAGGCCCTCCCTGTCAC...GATGGGACAGTGGCCATCTTCATCGGCATAATTATGTTCATCATACCCTCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR GCA 90 bp ATGATGAACATAATTATGCCGATGAAGATGGCCACTGTCCCATCGGACACCATGGTGACAGGGAGGGCCTaGCCATTATCAAGCTTGGTC +
Preference number: 2 (lower is better)
Translates to: MMNIIMPMKMATVPSDTMVTGRA*PLSSLV
Trigger: GACCAAGCTTGATAATGGGCAGGCCCTCCCTGTCAC...CATGGTGTCCGATGGGACAGTGGCCATCTTCATCGGCATAATTATGTTCATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR GCA 90 bp ATGATGAACATAATTATGCCGATGAAGATGGCCACTGTCCCATCGGACACCATGTGGGTGAGGTGGAGATaGTTCTGGCTGAGATGTGCC +
Preference number: 2 (lower is better)
Translates to: MMNIIMPMKMATVPSDTMWVRWR*FWLRCA
Trigger: GGCACATCTCAGCCAGAAGCATCTCCACCTCACCCA...CATGGTGTCCGATGGGACAGTGGCCATCTTCATCGGCATAATTATGTTCATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR GCA 90 bp CAGCCCTGGGAACTTGGAGGGTATGATGAACATAATTATGCCGATGAAGATGGCGCCTGCTGTTGCTCCTaGATCTTTTCCCCAATGCCA +
Preference number: 2 (lower is better)
Translates to: QPWELGGYDEHNYADEDGACCCS*IFSPMP
Trigger: TGGCATTGGGGAAAAGATGCAGGAGCAACAGCAGGC...GCCATCTTCATCGGCATAATTATGTTCATCATACCCTCCAAGTTCCCAGGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR GCA 90 bp ATGATGAACATAATTATGCCGATGAAGATGGCCACTGTCCCATCGGACACCATGGCTGATGGCCTTTTCTaGAAAGGTCATGGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: MMNIIMPMKMATVPSDTMADGLF*KGHGAQ
Trigger: CTGGGCCCCATGACCTTTGCAGAAAAGGCCATCAGC...CATGGTGTCCGATGGGACAGTGGCCATCTTCATCGGCATAATTATGTTCATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CCA 90 bp TCAATAAATACAGTGCAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTCTGGAGCTTGGAGCTTaGAGCTTGGGGTGTCCCCTC +
Preference number: 2 (lower is better)
Translates to: SINTVQVSLVTKLGIPRPLELGA*SLGCPL
Trigger: GAGGGGACACCCCAAGCTCCAAGCTCCAAGCTCCAG...AGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTGCACTGTATTTATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CCA 90 bp CTTGGAGGGTATGATGAACATAATTATGCCGATGAAGATGGCCACTGTCCCATCAGACTGGCATTCCCCTaGGCTCTCGAAACTGGATGG +
Preference number: 2 (lower is better)
Translates to: LGGYDEHNYADEDGHCPIRLAFP*ALETGW
Trigger: CCATCCAGTTTCGAGAGCCCAGGGGAATGCCAGTCT...GATGGGACAGTGGCCATCTTCATCGGCATAATTATGTTCATCATACCCTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459818.2
3UTR-3UTR CCA 90 bp ATGATGAACATAATTATGCCGATGAAGATGGCCACTGTCCCATCGGACACCATGCTCCTTCTGGGGACTTaGTTCCTGGAGCTCGAAGGT +
Preference number: 2 (lower is better)
Translates to: MMNIIMPMKMATVPSDTMLLLGT*FLELEG
Trigger: ACCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGGAG...CATGGTGTCCGATGGGACAGTGGCCATCTTCATCGGCATAATTATGTTCATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CCA 90 bp CTTGGAGGGTATGATGAACATAATTATGCCGATGAAGATGGCCACTGTCCCATCTTGGTCACCTCCTTCTaGGGACTTGGTTCCTGGAGC +
Preference number: 2 (lower is better)
Translates to: LGGYDEHNYADEDGHCPILVTSF*GLGSWS
Trigger: GCTCCAGGAACCAAGTCCCCAGAAGGAGGTGACCAA...GATGGGACAGTGGCCATCTTCATCGGCATAATTATGTTCATCATACCCTCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CCA 90 bp ATGATGAACATAATTATGCCGATGAAGATGGCCACTGTCCCATCGGACACCATGTTGGTCACCTCCTTCTaGGGACTTGGTTCCTGGAGC +
Preference number: 2 (lower is better)
Translates to: MMNIIMPMKMATVPSDTMLVTSF*GLGSWS
Trigger: GCTCCAGGAACCAAGTCCCCAGAAGGAGGTGACCAA...CATGGTGTCCGATGGGACAGTGGCCATCTTCATCGGCATAATTATGTTCATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CCA 90 bp CAGCCCTGGGAACTTGGAGGGTATGATGAACATAATTATGCCGATGAAGATGGCACCACGTTGCCGTTTTaGGGGAAGAGCGAGTTGATC +
Preference number: 2 (lower is better)
Translates to: QPWELGGYDEHNYADEDGTTLPF*GKSELI
Trigger: GATCAACTCGCTCTTCCCCCAAAACGGCAACGTGGT...GCCATCTTCATCGGCATAATTATGTTCATCATACCCTCCAAGTTCCCAGGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR TCA 90 bp CAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTAGTAGGCCTCTCTGCTaGTTCAGGAAGAAGTTTCTG +
Preference number: 2 (lower is better)
Translates to: QEIMYTRAFQPLAWSLELSRPLC*FRKKFL
Trigger: CAGAAACTTCTTCCTGAATCAGCAGAGAGGCCTACT...AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR GCA 90 bp TCAATAAATACAGTGCAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTCACCCCTCACATCCATaGAGGCGCACACATATGCGC +
Preference number: 2 (lower is better)
Translates to: SINTVQVSLVTKLGIPRPHPSHP*RRTHMR
Trigger: GCGCATATGTGTGCGCCTGCATGGATGTGAGGGGTG...AGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTGCACTGTATTTATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CCA 90 bp TGCATCTTTTCCCCAATGCCAAAGTTCTTCCGGAAGTTGAAGCCCAGGAAGAGGCTGGGCTCTCGAAACTaGATGGAAATGGTCTCTGAA +
Preference number: 2 (lower is better)
Translates to: CIFSPMPKFFRKLKPRKRLGSRN*MEMVSE
Trigger: TTCAGAGACCATTTCCATCCAGTTTCGAGAGCCCAG...CCTCTTCCTGGGCTTCAACTTCCGGAAGAACTTTGGCATTGGGGAAAAGATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459818.2
3UTR-3UTR TCA 90 bp TGCATCTTTTCCCCAATGCCAAAGTTCTTCCGGAAGTTGAAGCCCAGGAAGAGGATGTTGTATTGTCTGTaGACACACACGTGTGCACTG +
Preference number: 2 (lower is better)
Translates to: CIFSPMPKFFRKLKPRKRMLYCL*THTCAL
Trigger: CAGTGCACACGTGTGTGTTCACAGACAATACAACAT...CCTCTTCCTGGGCTTCAACTTCCGGAAGAACTTTGGCATTGGGGAAAAGATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR GCA 90 bp ATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGGCGTCATATTCTATGTaGTTCAAATGCTTTTACAAG +
Preference number: 2 (lower is better)
Translates to: IHPFLTDTQEIMYTRAFQASYSM*FKCFYK
Trigger: CTTGTAAAAGCATTTGAAGCACATAGAATATGACGC...CTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR GCA 90 bp TCAATAAATACAGTGCAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTGCGTCATATTCTATGTaGTTCAAATGCTTTTACAAG +
Preference number: 2 (lower is better)
Translates to: SINTVQVSLVTKLGIPRPASYSM*FKCFYK
Trigger: CTTGTAAAAGCATTTGAAGCACATAGAATATGACGC...AGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTGCACTGTATTTATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR GCA 72 bp CTGCCCTCCTCGACGTTGCTGCTGGCTTGCGAGCTGTaGAGCTGGTCCAGGACGGCATGTGCGATGGGCACC +
Preference number: 3 (lower is better)
Translates to: LPSSTLLLACEL*SWSRTACAMGT
Trigger: GGTGCCCATCGCACATGCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR GCA 72 bp TGGGTGCGGTGCCAGTCAGCGTGGCGATGCCCCCGATaGTGGCGGAGTAGCACACGCACAGGCTCATGCACT +
Preference number: 3 (lower is better)
Translates to: WVRCQSAWRCPR*WRSSTRTGSCT
Trigger: AGTGCATGAGCCTGTGCGTGTGCTACTCCGCCAGCATCGGGGGCATCGCCACGCTGACTGGCACCGCACCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CAA 90 bp GACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCCCTCCTCCCTTGGAGCTTGGAGCTaGGGGTGTCCCCTCCGGGCT +
Preference number: 3 (lower is better)
Translates to: DFNSPEAVPVAAAGRPSSLGAWS*GCPLRA
Trigger: AGCCCGGAGGGGACACCCCAAGCTCCAAGCTCCAAG...GGAGGAGGGCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
3UTR GCA 72 bp GGGTTGTTGCTGCCCTCCTCGACGTTGCTGCTGGCTTaGGAGCTGTGCAGCTGGTCCAGGACGGCATGTGCG +
Preference number: 3 (lower is better)
Translates to: GLLLPSSTLLLA*ELCSWSRTACA
Trigger: CGCACATGCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAACCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR GCA 72 bp CGAAGGTGGGGTTGTTGCTGCCCTCCTCGACGTTGCTaGTGGCTTGCGAGCTGTGCAGCTGGTCCAGGACGG +
Preference number: 3 (lower is better)
Translates to: RRWGCCCPPRRC*WLASCAAGPGR
Trigger: CCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAACCCCACCTTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR TCA 72 bp AGCCCAGGATTAGCGGGGCAGGCCGCACCCCAACGATaGGGAGGACACGGAGGGCGATGCGTTTATGCAGGT +
Preference number: 3 (lower is better)
Translates to: SPGLAGQAAPQR*GGHGGRCVYAG
Trigger: ACCTGCATAAACGCATCGCCCTCCGTGTCCTCCTCATCGTTGGGGTGCGGCCTGCCCCGCTAATCCTGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR TCA 72 bp ACTCTGCAGTGGGGTCAGCTTGTTTCCCAGCCACTCTaGCAGGCCCGATCGCTCACTGCCCTTGGCCAGGGC +
Preference number: 3 (lower is better)
Translates to: TLQWGQLVSQPL*QARSLTALGQG
Trigger: GCCCTGGCCAAGGGCAGTGAGCGATCGGGCCTGTCAGAGTGGCTGGGAAACAAGCTGACCCCACTGCAGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR GCA 72 bp GCTCGAAGGTGGGGTTGTTGCTGCCCTCCTCGACGTTaGTGCTGGCTTGCGAGCTGTGCAGCTGGTCCAGGA +
Preference number: 3 (lower is better)
Translates to: ARRWGCCCPPRR*CWLASCAAGPG
Trigger: TCCTGGACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAACCCCACCTTCGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR GCA 72 bp GGGGACTTGGTTCCTGGAGCTCGAAGGTGGGGTTGTTaGTGCCCTCCTCGACGTTGCTGCTGGCTTGCGAGC +
Preference number: 3 (lower is better)
Translates to: GDLVPGARRWGC*CPPRRCCWLAS
Trigger: GCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGGAACCAAGTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR CCA 72 bp AGGTGGGGTTGTTGCTGCCCTCCTCGACGTTGCTGCTaGCTTGCGAGCTGTGCAGCTGGTCCAGGACGGCAT +
Preference number: 3 (lower is better)
Translates to: RWGCCCPPRRCC*LASCAAGPGRH
Trigger: ATGCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAACCCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CAA 90 bp GGCCCGATCGCTCACTGCCCTTGGCCAGGGCATAGCCACCACCCAGCAATAACAAGCTCGAAGGTGGGGTaGTTGCTGCCCTCCTCGACG +
Preference number: 3 (lower is better)
Translates to: GPIAHCPWPGHSHHPAITSSKVG*LLPSST
Trigger: CGTCGAGGAGGGCAGCAACAACCCCACCTTCGAGCT...TGTTATTGCTGGGTGGTGGCTATGCCCTGGCCAAGGGCAGTGAGCGATCGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CAA 90 bp TTGTTGCTGCCCTCCTCGACGTTGCTGCTGGCTTGCGAGCTGTGCAGCTGGTCCCCTTTGGCCTGGAGCTaGGAGCTTGGAGCTTGGGGT +
Preference number: 3 (lower is better)
Translates to: LLLPSSTLLLACELCSWSPLAWS*ELGAWG
Trigger: ACCCCAAGCTCCAAGCTCCAAGCTCCAGGCCAAAGG...GGACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CAA 90 bp TCCCGAGCATGTGAGCCCCAGATGTGTCCTCCTCCCAACCCCTGCAACTCTCACGACGTTGCTGCTGGCTaGCGAGCTGTGCAGCTGGTC +
Preference number: 3 (lower is better)
Translates to: SRACEPQMCPPPNPCNSHDVAAG*RAVQLV
Trigger: GACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTC...GTGAGAGTTGCAGGGGTTGGGAGGAGGACACATCTGGGGCTCACATGCTCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577903.5
3UTR-3UTR CAA 90 bp GATGGCCTTTTCTGCAAAGGTCATGGGGCCCAGCAGCCTGTGCTCGGTCTGGATCTGCCCTCCTCGACGTaGCTGCTGGCTTGCGAGCTG +
Preference number: 3 (lower is better)
Translates to: DGLFCKGHGAQQPVLGLDLPSST*LLACEL
Trigger: CAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAG...ATCCAGACCGAGCACAGGCTGCTGGGCCCCATGACCTTTGCAGAAAAGGCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CAA 90 bp CCCGAGCATGTGAGCCCCAGATGTGTCCTCCTCCCAACCCCTGCAACTCTCACCTCGAAGGTGGGGTTGTaGCTGCCCTCCTCGACGTTG +
Preference number: 3 (lower is better)
Translates to: PEHVSPRCVLLPTPATLTSKVGL*LPSSTL
Trigger: CAACGTCGAGGAGGGCAGCAACAACCCCACCTTCGA...GGTGAGAGTTGCAGGGGTTGGGAGGAGGACACATCTGGGGCTCACATGCTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000577903.5
3UTR-3UTR CAA 90 bp GAAGAGGGGGATGCCCCAGCTGTTGATGGCCAGTGCGATGATCAGGACTCCAATTCGGACACCATGCTGTaGGTGGAGGGGGCGCGGGGA +
Preference number: 3 (lower is better)
Translates to: EEGDAPAVDGQCDDQDSNSDTML*VEGARG
Trigger: TCCCCGCGCCCCCTCCACCAACAGCATGGTGTCCGA...ATTGGAGTCCTGATCATCGCACTGGCCATCAACAGCTGGGGCATCCCCCTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000577903.5
3UTR TCA 72 bp AGGTCATGGGGCCCAGCAGCCTGTGCTCGGTCTGGATaGCGCAGTAGGCTGCCTGCTGTTGCTCCTGCATCT +
Preference number: 3 (lower is better)
Translates to: RSWGPAACARSG*RSRLPAVAPAS
Trigger: AGATGCAGGAGCAACAGCAGGCAGCCTACTGCGTCATCCAGACCGAGCACAGGCTGCTGGGCCCCATGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR GCA 72 bp GCACTGGGTGAGGTGGAGATGCTTCTGGCTGAGATGTaGCCTCCCCTCCGAAGAGGCAGACGTGACAGGGAG +
Preference number: 3 (lower is better)
Translates to: ALGEVEMLLAEM*PPLRRGRRDRE
Trigger: CTCCCTGTCACGTCTGCCTCTTCGGAGGGGAGGGCACATCTCAGCCAGAAGCATCTCCACCTCACCCAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR CCA 72 bp TCCTCGACGTTGCTGCTGGCTTGCGAGCTGTGCAGCTaGTCCAGGACGGCATGTGCGATGGGCACCATCATG +
Preference number: 3 (lower is better)
Translates to: SSTLLLACELCS*SRTACAMGTIM
Trigger: CATGATGGTGCCCATCGCACATGCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR CCA 72 bp CCTCCTTCTGGGGACTTGGTTCCTGGAGCTCGAAGGTaGGGTTGTTGCTGCCCTCCTCGACGTTGCTGCTGG +
Preference number: 3 (lower is better)
Translates to: PPSGDLVPGARR*GCCCPPRRCCW
Trigger: CCAGCAGCAACGTCGAGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CAA 90 bp CCTTCTGGGGACTTGGTTCCTGGAGCTCGAAGGTGGGGTTGTTGCTGCCCTCCTCCTTTGGCCTGGAGCTaGGAGCTTGGAGCTTGGGGT +
Preference number: 3 (lower is better)
Translates to: PSGDLVPGARRWGCCCPPPLAWS*ELGAWG
Trigger: ACCCCAAGCTCCAAGCTCCAAGCTCCAGGCCAAAGG...AGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR GCA 72 bp CCAACGATGAGGAGGACACGGAGGGCGATGCGTTTATaGAGGTTCCAGTGTTCCACCGCGATGGCCACCAGC +
Preference number: 3 (lower is better)
Translates to: PTMRRTRRAMRL*RFQCSTAMATS
Trigger: GCTGGTGGCCATCGCGGTGGAACACTGGAACCTGCATAAACGCATCGCCCTCCGTGTCCTCCTCATCGTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR GCA 72 bp GACTTGGTTCCTGGAGCTCGAAGGTGGGGTTGTTGCTaGCCTCCTCGACGTTGCTGCTGGCTTGCGAGCTGT +
Preference number: 3 (lower is better)
Translates to: DLVPGARRWGCC*PPRRCCWLASC
Trigger: ACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGGAACCAAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR CCA 72 bp CACAGGCTCATGCACTGGGTGAGGTGGAGATGCTTCTaGCTGAGATGTGCCCTCCCCTCCGAAGAGGCAGAC +
Preference number: 3 (lower is better)
Translates to: HRLMHWVRWRCF*LRCALPSEEAD
Trigger: GTCTGCCTCTTCGGAGGGGAGGGCACATCTCAGCCAGAAGCATCTCCACCTCACCCAGTGCATGAGCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CAA 90 bp CCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGTGCACCTTGGAGCTTGGAGCTaGGGGTGTCCCCTCCGGGCT +
Preference number: 3 (lower is better)
Translates to: PGAPERACCIVCEHTRVHLGAWS*GCPLRA
Trigger: AGCCCGGAGGGGACACCCCAAGCTCCAAGCTCCAAG...GTGCACACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CAA 90 bp AAAGGTCATGGGGCCCAGCAGCCTGTGCTCGGTCTGGATGACGCAGTAGGCTGCCACCACGTTGCCGTTTaGGGGGAAGAGCGAGTTGAT +
Preference number: 3 (lower is better)
Translates to: KGHGAQQPVLGLDDAVGCHHVAV*GEERVD
Trigger: ATCAACTCGCTCTTCCCCCAAAACGGCAACGTGGTG...GCAGCCTACTGCGTCATCCAGACCGAGCACAGGCTGCTGGGCCCCATGACCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR GCA 72 bp CAGCAGCCTGTGCTCGGTCTGGATGACGCAGTAGGCTaGCTGCTGTTGCTCCTGCATCTTTTCCCCAATGCC +
Preference number: 3 (lower is better)
Translates to: QQPVLGLDDAVG*LLLLLHLFPNA
Trigger: GGCATTGGGGAAAAGATGCAGGAGCAACAGCAGGCAGCCTACTGCGTCATCCAGACCGAGCACAGGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR CCA 72 bp TTTAATGTGACTTTAACAGCCCAGAGGCTGTTCCCGTaGCAGCTGCTGGCAGGCCCTCCTCCCAGGCCACTC +
Preference number: 3 (lower is better)
Translates to: FNVTLTAQRLFP*QLLAGPPPRPL
Trigger: GAGTGGCCTGGGAGGAGGGCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTCACATTAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
3UTR CCA 72 bp TCAAGCTTGGTCACCTCCTTCTGGGGACTTGGTTCCTaGAGCTCGAAGGTGGGGTTGTTGCTGCCCTCCTCG +
Preference number: 3 (lower is better)
Translates to: SSLVTSFWGLGS*SSKVGLLLPSS
Trigger: CGAGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGGAGGTGACCAAGCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CAA 90 bp TGTCCCATCGGACACCATGCTCTCCCCCTTGGCATTGGGAAAAGCCAAATTGCCGACGTTGCTGCTGGCTaGCGAGCTGTGCAGCTGGTC +
Preference number: 3 (lower is better)
Translates to: CPIGHHALPLGIGKSQIADVAAG*RAVQLV
Trigger: GACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTC...GGCAATTTGGCTTTTCCCAATGCCAAGGGGGAGAGCATGGTGTCCGATGGGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CAA 90 bp CGCAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCCCTTGCAGCACCAGGTaGGGTGCGGTGCCAGTCAGC +
Preference number: 3 (lower is better)
Translates to: RKRLCTHVPFSLWPGAWSPCSTR*GAVPVS
Trigger: GCTGACTGGCACCGCACCCAACCTGGTGCTGCAAGG...GCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CAA 90 bp CCAAGTGTTACCTCCTGTTCTGCAATGGGGGCCCTATACCCTTCCCTCCTTCCCCGAGTTGATCTGGCCTaGCAGCACCAGGTTGGGTGC +
Preference number: 3 (lower is better)
Translates to: PSVTSCSAMGALYPSLLPRVDLA*QHQVGC
Trigger: GCACCCAACCTGGTGCTGCAAGGCCAGATCAACTCG...GGGAAGGAGGGAAGGGTATAGGGCCCCCATTGCAGAACAGGAGGTAACACTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577903.5
3UTR-3UTR CAA 90 bp GAAGAGGGGGATGCCCCAGCTGTTGATGGCCAGTGCGATGATCAGGACTCCAATGGGATGCCCCAGCTGTaGATGGCCAGTGCGATGATC +
Preference number: 3 (lower is better)
Translates to: EEGDAPAVDGQCDDQDSNGMPQL*MASAMI
Trigger: GATCATCGCACTGGCCATCAACAGCTGGGGCATCCC...ATTGGAGTCCTGATCATCGCACTGGCCATCAACAGCTGGGGCATCCCCCTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CAA 90 bp CCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGTGCACCCTTTGGCCTGGAGCTaGGAGCTTGGAGCTTGGGGT +
Preference number: 3 (lower is better)
Translates to: PGAPERACCIVCEHTRVHPLAWS*ELGAWG
Trigger: ACCCCAAGCTCCAAGCTCCAAGCTCCAGGCCAAAGG...GTGCACACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CAA 90 bp CCAGGGCATAGCCACCACCCAGCAATAACACGATATTCCACGGCATCTTCTGGTGACGTTGCTGCTGGCTaGCGAGCTGTGCAGCTGGTC +
Preference number: 3 (lower is better)
Translates to: PGHSHHPAITRYSTASSGDVAAG*RAVQLV
Trigger: GACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTC...ACCAGAAGATGCCGTGGAATATCGTGTTATTGCTGGGTGGTGGCTATGCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CAA 90 bp ATTATGCCGATGAAGATGGCCACTGTCCCATCGGACACCATGCTCTCCCCCTTGCCTCCTTCTGGGGACTaGGTTCCTGGAGCTCGAAGG +
Preference number: 3 (lower is better)
Translates to: IMPMKMATVPSDTMLSPLPPSGD*VPGARR
Trigger: CCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGGAGG...CAAGGGGGAGAGCATGGTGTCCGATGGGACAGTGGCCATCTTCATCGGCATAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CAA 90 bp AACCAGGAGGCGAAGTTCACCACGTTGCCGTTTTGGGGGAAGAGCGAGTTGATCCCTCCTTCTGGGGACTaGGTTCCTGGAGCTCGAAGG +
Preference number: 3 (lower is better)
Translates to: NQEAKFTTLPFWGKSELIPPSGD*VPGARR
Trigger: CCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGGAGG...GATCAACTCGCTCTTCCCCCAAAACGGCAACGTGGTGAACTTCGCCTCCTGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CAA 90 bp CAGTGCGATGATCAGGACTCCAATGATGTTGAGGAGGAATCCTGCCCGGGCCATTGGGGGAAGAGCGAGTaGATCTGGCCTTGCAGCACC +
Preference number: 3 (lower is better)
Translates to: QCDDQDSNDVEEESCPGHWGKSE*IWPCST
Trigger: GGTGCTGCAAGGCCAGATCAACTCGCTCTTCCCCCA...ATGGCCCGGGCAGGATTCCTCCTCAACATCATTGGAGTCCTGATCATCGCACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR GCA 72 bp GAGAGGATGATGGCAATGGCTGGAGCTGGCACACTCTaGAGTGGGGTCAGCTTGTTTCCCAGCCACTCTGAC +
Preference number: 3 (lower is better)
Translates to: ERMMAMAGAGTL*SGVSLFPSHSD
Trigger: GTCAGAGTGGCTGGGAAACAAGCTGACCCCACTGCAGAGTGTGCCAGCTCCAGCCATTGCCATCATCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CAA 90 bp TGCATCTTTTCCCCAATGCCAAAGTTCTTCCGGAAGTTGAAGCCCAGGAAGAGGCTTGGAGCTTGGAGCTaGGGGTGTCCCCTCCGGGCT +
Preference number: 3 (lower is better)
Translates to: CIFSPMPKFFRKLKPRKRLGAWS*GCPLRA
Trigger: AGCCCGGAGGGGACACCCCAAGCTCCAAGCTCCAAG...CCTCTTCCTGGGCTTCAACTTCCGGAAGAACTTTGGCATTGGGGAAAAGATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CAA 90 bp CACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGCCTCTTGGAGCTTGGAGCTaGGGGTGTCCCCTCCGGGCT +
Preference number: 3 (lower is better)
Translates to: HPFLTDTQEIMYTRAFQPLGAWS*GCPLRA
Trigger: AGCCCGGAGGGGACACCCCAAGCTCCAAGCTCCAAG...AGGCTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CAA 90 bp CAAGACCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGCCTTTGGCCTGGAGCTaGGAGCTTGGAGCTTGGGGT +
Preference number: 3 (lower is better)
Translates to: QDLGHQRGHVVLSVNTHVPLAWS*ELGAWG
Trigger: ACCCCAAGCTCCAAGCTCCAAGCTCCAGGCCAAAGG...CACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGGTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CAA 90 bp CAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTGGGGCACCAGAGAGGCGTGCCTTTCAGCCTTaGGCCTGGAGCTTGGAGCTT +
Preference number: 3 (lower is better)
Translates to: QVSLVTKLGIPRPGAPERRAFQP*AWSLEL
Trigger: AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACG...CCTCTCTGGTGCCCCAGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CAA 90 bp AACCAGGAGGCGAAGTTCACCACGTTGCCGTTTTGGGGGAAGAGCGAGTTGATCCGTGCCTTTCAGCCTTaGGCCTGGAGCTTGGAGCTT +
Preference number: 3 (lower is better)
Translates to: NQEAKFTTLPFWGKSELIRAFQP*AWSLEL
Trigger: AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACG...GATCAACTCGCTCTTCCCCCAAAACGGCAACGTGGTGAACTTCGCCTCCTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CAA 90 bp GGCCCGATCGCTCACTGCCCTTGGCCAGGGCATAGCCACCACCCAGCAATAACAAGAGGGCATGTTGTATaGTCTGTGAACACACACGTG +
Preference number: 3 (lower is better)
Translates to: GPIAHCPWPGHSHHPAITRGHVV*SVNTHV
Trigger: CACGTGTGTGTTCACAGACAATACAACATGCCCTCT...TGTTATTGCTGGGTGGTGGCTATGCCCTGGCCAAGGGCAGTGAGCGATCGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CAA 90 bp AGGATGACGAATAGGATGCTGATGGCCTTTTCTGCAAAGGTCATGGGGCCCAGCCCTCCTTCTGGGGACTaGGTTCCTGGAGCTCGAAGG +
Preference number: 3 (lower is better)
Translates to: RMTNRMLMAFSAKVMGPSPPSGD*VPGARR
Trigger: CCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGGAGG...GCTGGGCCCCATGACCTTTGCAGAAAAGGCCATCAGCATCCTATTCGTCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CAA 90 bp CACCCAGCAATAACACGATATTCCACGGCATCTTCTGGTTCACCGTCTTCCAGTCCTTGCAGCACCAGGTaGGGTGCGGTGCCAGTCAGC +
Preference number: 3 (lower is better)
Translates to: HPAITRYSTASSGSPSSSPCSTR*GAVPVS
Trigger: GCTGACTGGCACCGCACCCAACCTGGTGCTGCAAGG...ACTGGAAGACGGTGAACCAGAAGATGCCGTGGAATATCGTGTTATTGCTGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CAA 90 bp CACCCAGCAATAACACGATATTCCACGGCATCTTCTGGTTCACCGTCTTCCAGTGTTAGCCGCTTGGGGTaGCTCAGGGCCACAGGGTGG +
Preference number: 3 (lower is better)
Translates to: HPAITRYSTASSGSPSSSVSRLG*LRATGW
Trigger: CCACCCTGTGGCCCTGAGCAACCCCAAGCGGCTAAC...ACTGGAAGACGGTGAACCAGAAGATGCCGTGGAATATCGTGTTATTGCTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577903.5
3UTR GCA 72 bp GAACCTTCATCCCCCACCAAGTGTTACCTCCTGTTCTaGAATGGGGGCCCTATACCCTTCCCTCCTTCCCGA +
Preference number: 3 (lower is better)
Translates to: EPSSPTKCYLLF*NGGPIPFPPSR
Trigger: TCGGGAAGGAGGGAAGGGTATAGGGCCCCCATTGCAGAACAGGAGGTAACACTTGGTGGGGGATGAAGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000577903.5
3UTR CCA 72 bp CCCATTATCAAGCTTGGTCACCTCCTTCTGGGGACTTaGTTCCTGGAGCTCGAAGGTGGGGTTGTTGCTGCC +
Preference number: 3 (lower is better)
Translates to: PIIKLGHLLLGT*FLELEGGVVAA
Trigger: GGCAGCAACAACCCCACCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGGAGGTGACCAAGCTTGATAATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR CCA 72 bp TTCATCCCCCACCAAGTGTTACCTCCTGTTCTGCAATaGGGGCCCTATACCCTTCCCTCCTTCCCGAGCATG +
Preference number: 3 (lower is better)
Translates to: FIPHQVLPPVLQ*GPYTLPSFPSM
Trigger: CATGCTCGGGAAGGAGGGAAGGGTATAGGGCCCCCATTGCAGAACAGGAGGTAACACTTGGTGGGGGATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577903.5
3UTR-3UTR CAA 90 bp ATGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACCTGGAGCTTGGAGCTaGGAGCTTGGGGTGTCCCCT +
Preference number: 3 (lower is better)
Translates to: MQAHTYAHTHMHTPFIPAPGAWS*ELGVSP
Trigger: AGGGGACACCCCAAGCTCCAAGCTCCAAGCTCCAGG...TGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CAA 90 bp AAAGGTCATGGGGCCCAGCAGCCTGTGCTCGGTCTGGATGACGCAGTAGGCTGCTATTGGAGGATGACTTaGTGCCAGGCGTCATATTCT +
Preference number: 3 (lower is better)
Translates to: KGHGAQQPVLGLDDAVGCYWRMT*CQASYS
Trigger: AGAATATGACGCCTGGCACAAAGTCATCCTCCAATA...GCAGCCTACTGCGTCATCCAGACCGAGCACAGGCTGCTGGGCCCCATGACCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CAA 90 bp GAAGAGGGGGATGCCCCAGCTGTTGATGGCCAGTGCGATGATCAGGACTCCAATTGCCCATTATCAAGCTaGGTCACCTCCTTCTGGGGA +
Preference number: 3 (lower is better)
Translates to: EEGDAPAVDGQCDDQDSNCPLSS*VTSFWG
Trigger: TCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGCA...ATTGGAGTCCTGATCATCGCACTGGCCATCAACAGCTGGGGCATCCCCCTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CAA 90 bp GCATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCCCCCAGCCTAGGGGCTaGGTGTGGTGGTGTTGGCCA +
Preference number: 3 (lower is better)
Translates to: AYTPSLQTRKRLCTHVPFPQPRG*VWWCWP
Trigger: TGGCCAACACCACCACACCAAGCCCCTAGGCTGGGG...GAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CAA 90 bp GAAGAGGGGGATGCCCCAGCTGTTGATGGCCAGTGCGATGATCAGGACTCCAATTCTCACCTCTCCCCCTaGGCATTGGGAAAAGCCAAA +
Preference number: 3 (lower is better)
Translates to: EEGDAPAVDGQCDDQDSNSHLSP*ALGKAK
Trigger: TTTGGCTTTTCCCAATGCCAAGGGGGAGAGGTGAGA...ATTGGAGTCCTGATCATCGCACTGGCCATCAACAGCTGGGGCATCCCCCTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000577903.5
3UTR GCA 72 bp AAGTTCTTCCGGAAGTTGAAGCCCAGGAAGAGGATCTaGAGCCACAACCAGGCCAGCAGCAGCAAGATGACC +
Preference number: 3 (lower is better)
Translates to: KFFRKLKPRKRI*SHNQASSSKMT
Trigger: GGTCATCTTGCTGCTGCTGGCCTGGTTGTGGCTGCAGATCCTCTTCCTGGGCTTCAACTTCCGGAAGAACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR GCA 72 bp GCTGAAGAGGGGGATGCCCCAGCTGTTGATGGCCAGTaGGATGATCAGGACTCCAATGATGTTGAGGAGGAA +
Preference number: 3 (lower is better)
Translates to: AEEGDAPAVDGQ*DDQDSNDVEEE
Trigger: TTCCTCCTCAACATCATTGGAGTCCTGATCATCGCACTGGCCATCAACAGCTGGGGCATCCCCCTCTTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR CCA 72 bp CCACCCAGCAATAACACGATATTCCACGGCATCTTCTaGTTCACCGTCTTCCAGTCGAGGAGGCCAAGAGGG +
Preference number: 3 (lower is better)
Translates to: PPSNNTIFHGIF*FTVFQSRRPRG
Trigger: CCCTCTTGGCCTCCTCGACTGGAAGACGGTGAACCAGAAGATGCCGTGGAATATCGTGTTATTGCTGGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CAA 90 bp GCTCACTGCCCTTGGCCAGGGCATAGCCACCACCCAGCAATAACACGATATTCCAAGTTCTTCCGGAAGTaGAAGCCCAGGAAGAGGATC +
Preference number: 3 (lower is better)
Translates to: AHCPWPGHSHHPAITRYSKFFRK*KPRKRI
Trigger: GATCCTCTTCCTGGGCTTCAACTTCCGGAAGAACTT...GGAATATCGTGTTATTGCTGGGTGGTGGCTATGCCCTGGCCAAGGGCAGTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CAA 90 bp CACCCAGCAATAACACGATATTCCACGGCATCTTCTGGTTCACCGTCTTCCAGTCGTGCCTTTCAGCCTTaGGCCTGGAGCTTGGAGCTT +
Preference number: 3 (lower is better)
Translates to: HPAITRYSTASSGSPSSSRAFQP*AWSLEL
Trigger: AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACG...ACTGGAAGACGGTGAACCAGAAGATGCCGTGGAATATCGTGTTATTGCTGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CAA 90 bp CGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACATAGGATCGAAGGTGGGGTTGTaGCTGCCCTCCTCGACGTTG +
Preference number: 3 (lower is better)
Translates to: RTHMRTHTCTHLLFQHIGSKVGL*LPSSTL
Trigger: CAACGTCGAGGAGGGCAGCAACAACCCCACCTTCGA...TCCTATGTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CAA 90 bp ATGATGAACATAATTATGCCGATGAAGATGGCCACTGTCCCATCGGACACCATGAGCTCGAAGGTGGGGTaGTTGCTGCCCTCCTCGACG +
Preference number: 3 (lower is better)
Translates to: MMNIIMPMKMATVPSDTMSSKVG*LLPSST
Trigger: CGTCGAGGAGGGCAGCAACAACCCCACCTTCGAGCT...CATGGTGTCCGATGGGACAGTGGCCATCTTCATCGGCATAATTATGTTCATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CAA 90 bp CATAGCCACCACCCAGCAATAACACGATATTCCACGGCATCTTCTGGTTCACCGCACCACGTTGCCGTTTaGGGGGAAGAGCGAGTTGAT +
Preference number: 3 (lower is better)
Translates to: HSHHPAITRYSTASSGSPHHVAV*GEERVD
Trigger: ATCAACTCGCTCTTCCCCCAAAACGGCAACGTGGTG...CGGTGAACCAGAAGATGCCGTGGAATATCGTGTTATTGCTGGGTGGTGGCTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR GCA 72 bp TCACACACCCCTCACATCCATGCAGGCGCACACATATaGGCACACACACATGCACACACCTTTTATTCCAGC +
Preference number: 3 (lower is better)
Translates to: SHTPHIHAGAHI*AHTHAHTFYSS
Trigger: GCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCATGGATGTGAGGGGTGTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
3UTR CCA 72 bp CAGCTTCCCTGGGTTTTCTGGGTCCTGGGTCAGCCCTaGGAACTTGGAGGGTATGATGAACATAATTATGCC +
Preference number: 3 (lower is better)
Translates to: QLPWVFWVLGQP*ELGGYDEHNYA
Trigger: GGCATAATTATGTTCATCATACCCTCCAAGTTCCCAGGGCTGACCCAGGACCCAGAAAACCCAGGGAAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CAA 90 bp GAGGGTATGATGAACATAATTATGCCGATGAAGATGGCCACTGTCCCATCGGACGCGAAGTTCACCACGTaGCCGTTTTGGGGGAAGAGC +
Preference number: 3 (lower is better)
Translates to: EGMMNIIMPMKMATVPSDAKFTT*PFWGKS
Trigger: GCTCTTCCCCCAAAACGGCAACGTGGTGAACTTCGC...GTCCGATGGGACAGTGGCCATCTTCATCGGCATAATTATGTTCATCATACCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CAA 90 bp CAGCCCTGGGAACTTGGAGGGTATGATGAACATAATTATGCCGATGAAGATGGCGCGAAGTTCACCACGTaGCCGTTTTGGGGGAAGAGC +
Preference number: 3 (lower is better)
Translates to: QPWELGGYDEHNYADEDGAKFTT*PFWGKS
Trigger: GCTCTTCCCCCAAAACGGCAACGTGGTGAACTTCGC...GCCATCTTCATCGGCATAATTATGTTCATCATACCCTCCAAGTTCCCAGGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CAA 90 bp TCCCATAGACAAGCCTGGGGAACCTTCATCCCCCACCAAGTGTTACCTCCTGTTAAGTTCTTCCGGAAGTaGAAGCCCAGGAAGAGGATC +
Preference number: 3 (lower is better)
Translates to: SHRQAWGTFIPHQVLPPVKFFRK*KPRKRI
Trigger: GATCCTCTTCCTGGGCTTCAACTTCCGGAAGAACTT...AACAGGAGGTAACACTTGGTGGGGGATGAAGGTTCCCCAGGCTTGTCTATGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577903.5
3UTR-3UTR CAA 90 bp CCAGGGCATAGCCACCACCCAGCAATAACACGATATTCCACGGCATCTTCTGGTGTCAGCCCTGGGAACTaGGAGGGTATGATGAACATA +
Preference number: 3 (lower is better)
Translates to: PGHSHHPAITRYSTASSGVSPGN*EGMMNI
Trigger: TATGTTCATCATACCCTCCAAGTTCCCAGGGCTGAC...ACCAGAAGATGCCGTGGAATATCGTGTTATTGCTGGGTGGTGGCTATGCCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CAA 90 bp CAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTTGCCCATTATCAAGCTaGGTCACCTCCTTCTGGGGA +
Preference number: 3 (lower is better)
Translates to: QEIMYTRAFQPLAWSLELCPLSS*VTSFWG
Trigger: TCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGCA...AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CAA 90 bp GCATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCCACCACGTTGCCGTTTaGGGGGAAGAGCGAGTTGAT +
Preference number: 3 (lower is better)
Translates to: AYTPSLQTRKRLCTHVPFHHVAV*GEERVD
Trigger: ATCAACTCGCTCTTCCCCCAAAACGGCAACGTGGTG...GAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR CCA 72 bp GTCCTTAAGATACTCGACGGCAACATTCCCACAGACTaGCATTCCCCTGGGCTCTCGAAACTGGATGGAAAT +
Preference number: 3 (lower is better)
Translates to: VLKILDGNIPTD*HSPGLSKLDGN
Trigger: ATTTCCATCCAGTTTCGAGAGCCCAGGGGAATGCCAGTCTGTGGGAATGTTGCCGTCGAGTATCTTAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459818.2
3UTR-3UTR CAA 90 bp GACTCCAATGATGTTGAGGAGGAATCCTGCCCGGGCCATATCCAACACTTTGAGAGAGGGCATGTTGTATaGTCTGTGAACACACACGTG +
Preference number: 3 (lower is better)
Translates to: DSNDVEEESCPGHIQHFERGHVV*SVNTHV
Trigger: CACGTGTGTGTTCACAGACAATACAACATGCCCTCT...CTCAAAGTGTTGGATATGGCCCGGGCAGGATTCCTCCTCAACATCATTGGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CAA 90 bp GAGGGTATGATGAACATAATTATGCCGATGAAGATGGCCACTGTCCCATCGGACACCATGCTCTCCCCCTaGGCATTGGGAAAAGCCAAA +
Preference number: 3 (lower is better)
Translates to: EGMMNIIMPMKMATVPSDTMLSP*ALGKAK
Trigger: TTTGGCTTTTCCCAATGCCAAGGGGGAGAGCATGGT...GTCCGATGGGACAGTGGCCATCTTCATCGGCATAATTATGTTCATCATACCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CAA 90 bp TCAATAAATACAGTGCAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTCGTGCCTTTCAGCCTTaGGCCTGGAGCTTGGAGCTT +
Preference number: 3 (lower is better)
Translates to: SINTVQVSLVTKLGIPRPRAFQP*AWSLEL
Trigger: AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACG...AGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTGCACTGTATTTATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CAA 90 bp CGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACATAGGAAGAGGGCATGTTGTATaGTCTGTGAACACACACGTG +
Preference number: 3 (lower is better)
Translates to: RTHMRTHTCTHLLFQHIGRGHVV*SVNTHV
Trigger: CACGTGTGTGTTCACAGACAATACAACATGCCCTCT...TCCTATGTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
3UTR-3UTR CAA 90 bp TGCATCTTTTCCCCAATGCCAAAGTTCTTCCGGAAGTTGAAGCCCAGGAAGAGGTATTGGAGGATGACTTaGTGCCAGGCGTCATATTCT +
Preference number: 3 (lower is better)
Translates to: CIFSPMPKFFRKLKPRKRYWRMT*CQASYS
Trigger: AGAATATGACGCCTGGCACAAAGTCATCCTCCAATA...CCTCTTCCTGGGCTTCAACTTCCGGAAGAACTTTGGCATTGGGGAAAAGATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR-3UTR CAA 90 bp GCATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCTATTGGAGGATGACTTaGTGCCAGGCGTCATATTCT +
Preference number: 3 (lower is better)
Translates to: AYTPSLQTRKRLCTHVPFYWRMT*CQASYS
Trigger: AGAATATGACGCCTGGCACAAAGTCATCCTCCAATA...GAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR TCA 72 bp ACATGCACACACCTTTTATTCCAGCACATAGGAAACTaGGCATACACCCCTTCCTTACAGACACGCAAGAGA +
Preference number: 3 (lower is better)
Translates to: TCTHLLFQHIGN*AYTPSLQTRKR
Trigger: TCTCTTGCGTGTCTGTAAGGAAGGGGTGTATGCTCAGTTTCCTATGTGCTGGAATAAAAGGTGTGTGCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
3UTR GCA 72 bp AAGAAGTTTCTGTATAAGTATTGGAGGATGACTTTGTaGCAGGCGTCATATTCTATGTGCTTCAAATGCTTT +
Preference number: 3 (lower is better)
Translates to: KKFLYKYWRMTL*QASYSMCFKCF
Trigger: AAAGCATTTGAAGCACATAGAATATGACGCCTGGCACAAAGTCATCCTCCAATACTTATACAGAAACTTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR TCA 90 bp GCCCTCCTCGACGTTGCTGCTGGCTTGCGAGCTGTGCAGCTGGTCCAGGACGGCCCGAAGAGGCAGACGTaGCAGGGAGGGCCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: ALLDVAAGLRAVQLVQDGPKRQT*QGGPAH
Trigger: ATGGGCAGGCCCTCCCTGTCACGTCTGCCTCTTCGG...GCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR TCA 90 bp CATGGGGCCCAGCAGCCTGTGCTCGGTCTGGATGACGCAGTAGGCTGCCTGCTGAGCCCGGCTCCCGGGTaGACCAGAGCAGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: HGAQQPVLGLDDAVGCLLSPAPG*TRAAPG
Trigger: TCCTGGTGCTGCTCTGGTTCACCCGGGAGCCGGGCT...CAGCAGGCAGCCTACTGCGTCATCCAGACCGAGCACAGGCTGCTGGGCCCCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp GCCCTCCTCGACGTTGCTGCTGGCTTGCGAGCTGTGCAGCTGGTCCAGGACGGCGGCCCGATCGCTCACTaGCCTTGGCCAGGGCATAGC +
Preference number: 4 (lower is better)
Translates to: ALLDVAAGLRAVQLVQDGGPIAH*PWPGHS
Trigger: GCTATGCCCTGGCCAAGGGCAGTGAGCGATCGGGCC...GCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp AGGATTAGCGGGGCAGGCCGCACCCCAACGATGAGGAGGACACGGAGGGCGATGCGGACACCATGCTGTTaGTGGAGGGGGCGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: RISGAGRTPTMRRTRRAMRTPCC*WRGRGE
Trigger: CTCCCCGCGCCCCCTCCACCAACAGCATGGTGTCCG...CATCGCCCTCCGTGTCCTCCTCATCGTTGGGGTGCGGCCTGCCCCGCTAATCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000577903.5
CDS-3UTR TCA 90 bp GCCCTCCTCGACGTTGCTGCTGGCTTGCGAGCTGTGCAGCTGGTCCAGGACGGCGGAGATGCTTCTGGCTaGGATGTGCCCTCCCCTCCG +
Preference number: 4 (lower is better)
Translates to: ALLDVAAGLRAVQLVQDGGDASG*DVPSPP
Trigger: CGGAGGGGAGGGCACATCTCAGCCAGAAGCATCTCC...GCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp CCCGAGCATGTGAGCCCCAGATGTGTCCTCCTCCCAACCCCTGCAACTCTCACCGGGCGCGGGGAGGGCTaGGTTAGCCGCTTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: PEHVSPRCVLLPTPATLTGRGEG*VSRLGL
Trigger: CAACCCCAAGCGGCTAACCCAGCCCTCCCCGCGCCC...GGTGAGAGTTGCAGGGGTTGGGAGGAGGACACATCTGGGGCTCACATGCTCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000577903.5
3UTR CAA 72 bp GGGAAGAGCGAGTTGATCTGGCCTTGCAGCACCAGGTaGGGTGCGGTGCCAGTCAGCGTGGCGATGCCCCCG +
Preference number: 4 (lower is better)
Translates to: GKSELIWPCSTR*GAVPVSVAMPP
Trigger: CGGGGGCATCGCCACGCTGACTGGCACCGCACCCAACCTGGTGCTGCAAGGCCAGATCAACTCGCTCTTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp GCCCTCCTCGACGTTGCTGCTGGCTTGCGAGCTGTGCAGCTGGTCCAGGACGGCGGCAATGGCTGGAGCTaGCACACTCTGCAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: ALLDVAAGLRAVQLVQDGGNGWS*HTLQWG
Trigger: ACCCCACTGCAGAGTGTGCCAGCTCCAGCCATTGCC...GCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp GACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCCCTCCTCCCAGAGGCTGTTCCCGTaGCAGCTGCTGGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: DFNSPEAVPVAAAGRPSSQRLFP*QLLAGP
Trigger: AGGGCCTGCCAGCAGCTGCCACGGGAACAGCCTCTG...GGAGGAGGGCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
3UTR CAA 72 bp GGGGTTGTTGCTGCCCTCCTCGACGTTGCTGCTGGCTaGCGAGCTGTGCAGCTGGTCCAGGACGGCATGTGC +
Preference number: 4 (lower is better)
Translates to: GVVAALLDVAAG*RAVQLVQDGMC
Trigger: GCACATGCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAACCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR TCA 90 bp GCCGTTTTGGGGGAAGAGCGAGTTGATCTGGCCTTGCAGCACCAGGTTGGGTGCGCCGCACCCCAACGATaGGGAGGACACGGAGGGCGA +
Preference number: 4 (lower is better)
Translates to: AVLGEERVDLALQHQVGCAAPQR*GGHGGR
Trigger: TCGCCCTCCGTGTCCTCCTCATCGTTGGGGTGCGGC...GCACCCAACCTGGTGCTGCAAGGCCAGATCAACTCGCTCTTCCCCCAAAACGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR TCA 90 bp TTGTTGCTGCCCTCCTCGACGTTGCTGCTGGCTTGCGAGCTGTGCAGCTGGTCCCCGAAGAGGCAGACGTaGCAGGGAGGGCCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: LLLPSSTLLLACELCSWSPKRQT*QGGPAH
Trigger: ATGGGCAGGCCCTCCCTGTCACGTCTGCCTCTTCGG...GGACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR TCA 90 bp CATGGGGCCCAGCAGCCTGTGCTCGGTCTGGATGACGCAGTAGGCTGCCTGCTGGGCTCATGCACTGGGTaGGGTGGAGATGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: HGAQQPVLGLDDAVGCLLGSCTG*GGDASG
Trigger: GCCAGAAGCATCTCCACCTCACCCAGTGCATGAGCC...CAGCAGGCAGCCTACTGCGTCATCCAGACCGAGCACAGGCTGCTGGGCCCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR TCA 90 bp GACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCCCTCCTCCGAGTGCAGGGGAGCATaGCGTAGAGAGGGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: DFNSPEAVPVAAAGRPSSECRGA*RREGGG
Trigger: GCCTCCACCCTCTCTACGTCATGCTCCCCTGCACTC...GGAGGAGGGCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS-3UTR GCA 90 bp AGGATTAGCGGGGCAGGCCGCACCCCAACGATGAGGAGGACACGGAGGGCGATGCCTCCTCGACGTTGCTaGTGGCTTGCGAGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: RISGAGRTPTMRRTRRAMPPRRC*WLASCA
Trigger: TGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGG...CATCGCCCTCCGTGTCCTCCTCATCGTTGGGGTGCGGCCTGCCCCGCTAATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp GATCTGGCCTTGCAGCACCAGGTTGGGTGCGGTGCCAGTCAGCGTGGCGATGCCAGGTGGGGTTGTTGCTaGCCTCCTCGACGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: DLALQHQVGCGASQRGDARWGCC*PPRRCC
Trigger: GCAGCAACGTCGAGGAGGGCAGCAACAACCCCACCT...GGCATCGCCACGCTGACTGGCACCGCACCCAACCTGGTGCTGCAAGGCCAGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp TTGTTGCTGCCCTCCTCGACGTTGCTGCTGGCTTGCGAGCTGTGCAGCTGGTCCTGGCGATGCCCCCGATaGTGGCGGAGTAGCACACGC +
Preference number: 4 (lower is better)
Translates to: LLLPSSTLLLACELCSWSWRCPR*WRSSTR
Trigger: GCGTGTGCTACTCCGCCAGCATCGGGGGCATCGCCA...GGACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp TCTGCAATGGGGGCCCTATACCCTTCCCTCCTTCCCGAGCATGTGAGCCCCAGAGGCATGGCCAGGCTGTaGCCCAGCCTAGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SAMGALYPSLLPEHVSPRGMARL*PSLGAW
Trigger: CCAAGCCCCTAGGCTGGGGCACAGCCTGGCCATGCC...TCTGGGGCTCACATGCTCGGGAAGGAGGGAAGGGTATAGGGCCCCCATTGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000577903.5
CDS-3UTR CCA 90 bp CATGGGGCCCAGCAGCCTGTGCTCGGTCTGGATGACGCAGTAGGCTGCCTGCTGCCTCGACGTTGCTGCTaGCTTGCGAGCTGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: HGAQQPVLGLDDAVGCLLPRRCC*LASCAA
Trigger: AGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGG...CAGCAGGCAGCCTACTGCGTCATCCAGACCGAGCACAGGCTGCTGGGCCCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp GACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCCCTCCTCCCCCAGCCTAGGGGCTTaGTGTGGTGGTGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: DFNSPEAVPVAAAGRPSSPSLGA*CGGVGQ
Trigger: CTGGCCAACACCACCACACCAAGCCCCTAGGCTGGG...GGAGGAGGGCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
3UTR CAA 72 bp AGCTCGAAGGTGGGGTTGTTGCTGCCCTCCTCGACGTaGCTGCTGGCTTGCGAGCTGTGCAGCTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SSKVGLLLPSST*LLACELCSWSR
Trigger: CCTGGACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAACCCCACCTTCGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR TCA 90 bp GCTGGCTTGCGAGCTGTGCAGCTGGTCCAGGACGGCATGTGCGATGGGCACCATGTTTCCCAGCCACTCTaGCAGGCCCGATCGCTCACT +
Preference number: 4 (lower is better)
Translates to: AGLRAVQLVQDGMCDGHHVSQPL*QARSLT
Trigger: AGTGAGCGATCGGGCCTGTCAGAGTGGCTGGGAAAC...ATGGTGCCCATCGCACATGCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp GACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCCCTCCTCCTGGAGCAGCAAGGGCTaGTACAGCCACTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: DFNSPEAVPVAAAGRPSSWSSKG*YSHCLQ
Trigger: CTGGAGGCAGTGGCTGTAGCAGCCCTTGCTGCTCCA...GGAGGAGGGCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314669.10
ENST00000444914.7
CDS-3UTR GCA 90 bp GCGAGCTGTGCAGCTGGTCCAGGACGGCATGTGCGATGGGCACCATCATGGCTGGTCCAGGACGGCATGTaGGATGGGCACCATCATGGC +
Preference number: 4 (lower is better)
Translates to: ASCAAGPGRHVRWAPSWLVQDGM*DGHHHG
Trigger: GCCATGATGGTGCCCATCGCACATGCCGTCCTGGAC...CAGCCATGATGGTGCCCATCGCACATGCCGTCCTGGACCAGCTGCACAGCTCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp GACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCCCTCCTCCTGCCCTCCTCGACGTTaGTGCTGGCTTGCGAGCTGT +
Preference number: 4 (lower is better)
Translates to: DFNSPEAVPVAAAGRPSSCPPRR*CWLASC
Trigger: ACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCA...GGAGGAGGGCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS-3UTR GCA 90 bp GACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCCCTCCTCCCGAAGGTGGGGTTGTTaGTGCCCTCCTCGACGTTGC +
Preference number: 4 (lower is better)
Translates to: DFNSPEAVPVAAAGRPSSRRWGC*CPPRRC
Trigger: GCAACGTCGAGGAGGGCAGCAACAACCCCACCTTCG...GGAGGAGGGCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS-3UTR GCA 90 bp GCCCTCCTCGACGTTGCTGCTGGCTTGCGAGCTGTGCAGCTGGTCCAGGACGGCGTGACAGGGAGGGCCTaGCCATTATCAAGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: ALLDVAAGLRAVQLVQDGVTGRA*PLSSLV
Trigger: GACCAAGCTTGATAATGGGCAGGCCCTCCCTGTCAC...GCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp CCTTCTGGGGACTTGGTTCCTGGAGCTCGAAGGTGGGGTTGTTGCTGCCCTCCTCCAGGTTGGGTGCGGTaGCAGTCAGCGTGGCGATGC +
Preference number: 4 (lower is better)
Translates to: PSGDLVPGARRWGCCCPPPGWVR*QSAWRC
Trigger: GCATCGCCACGCTGACTGGCACCGCACCCAACCTGG...AGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp GCGAGCTGTGCAGCTGGTCCAGGACGGCATGTGCGATGGGCACCATCATGGCTGCCCAGGAAGAGGATCTaGAGCCACAACCAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: ASCAAGPGRHVRWAPSWLPRKRI*SHNQAS
Trigger: GCTGGCCTGGTTGTGGCTGCAGATCCTCTTCCTGGG...CAGCCATGATGGTGCCCATCGCACATGCCGTCCTGGACCAGCTGCACAGCTCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp CATGGGGCCCAGCAGCCTGTGCTCGGTCTGGATGACGCAGTAGGCTGCCTGCTGTCCCATCGGACACCATaGTCTCCCCCTTGGCATTGG +
Preference number: 4 (lower is better)
Translates to: HGAQQPVLGLDDAVGCLLSHRTP*SPPWHW
Trigger: CCAATGCCAAGGGGGAGAGCATGGTGTCCGATGGGA...CAGCAGGCAGCCTACTGCGTCATCCAGACCGAGCACAGGCTGCTGGGCCCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp GACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCCCTCCTCCCAGGTGGCCATGGTGTaGAGCAGCAAGGGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: DFNSPEAVPVAAAGRPSSQVAMV*SSKGCY
Trigger: GTAGCAGCCCTTGCTGCTCCACACCATGGCCACCTG...GGAGGAGGGCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314669.10
ENST00000444914.7
CDS-3UTR CCA 90 bp GACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCCCTCCTCCCCTCGACGTTGCTGCTaGCTTGCGAGCTGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: DFNSPEAVPVAAAGRPSSPRRCC*LASCAA
Trigger: AGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGG...GGAGGAGGGCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS-3UTR CCA 90 bp GCCCTCCTCGACGTTGCTGCTGGCTTGCGAGCTGTGCAGCTGGTCCAGGACGGCCACAGGCTCATGCACTaGGTGAGGTGGAGATGCTTC +
Preference number: 4 (lower is better)
Translates to: ALLDVAAGLRAVQLVQDGHRLMH*VRWRCF
Trigger: GAAGCATCTCCACCTCACCCAGTGCATGAGCCTGTG...GCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp GCTGGCTTGCGAGCTGTGCAGCTGGTCCAGGACGGCATGTGCGATGGGCACCATGGCAATGGCTGGAGCTaGCACACTCTGCAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: AGLRAVQLVQDGMCDGHHGNGWS*HTLQWG
Trigger: ACCCCACTGCAGAGTGTGCCAGCTCCAGCCATTGCC...ATGGTGCCCATCGCACATGCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp GCCCTCCTCGACGTTGCTGCTGGCTTGCGAGCTGTGCAGCTGGTCCAGGACGGCGATGATGGCAATGGCTaGAGCTGGCACACTCTGCAG +
Preference number: 4 (lower is better)
Translates to: ALLDVAAGLRAVQLVQDGDDGNG*SWHTLQ
Trigger: CTGCAGAGTGTGCCAGCTCCAGCCATTGCCATCATC...GCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp GACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCCCTCCTCCTGGAGGCAGATGGCCTaGGCCATGGAGGCTAGGATG +
Preference number: 4 (lower is better)
Translates to: DFNSPEAVPVAAAGRPSSWRQMA*AMEARM
Trigger: CATCCTAGCCTCCATGGCCCAGGCCATCTGCCTCCA...GGAGGAGGGCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS-3UTR CCA 90 bp AAAGGTCATGGGGCCCAGCAGCCTGTGCTCGGTCTGGATGACGCAGTAGGCTGCGCAGGCACTGGGCTGTaGTGTTGGACTGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: KGHGAQQPVLGLDDAVGCAGTGL*CWTVPR
Trigger: CCTGGGCACAGTCCAACACCACAGCCCAGTGCCTGC...GCAGCCTACTGCGTCATCCAGACCGAGCACAGGCTGCTGGGCCCCATGACCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp GATCTGGCCTTGCAGCACCAGGTTGGGTGCGGTGCCAGTCAGCGTGGCGATGCCAGGCTTGGCAGGCACTaGGCTGTGGTGTTGGACTGT +
Preference number: 4 (lower is better)
Translates to: DLALQHQVGCGASQRGDARLGRH*AVVLDC
Trigger: ACAGTCCAACACCACAGCCCAGTGCCTGCCAAGCCT...GGCATCGCCACGCTGACTGGCACCGCACCCAACCTGGTGCTGCAAGGCCAGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp TTGTTGCTGCCCTCCTCGACGTTGCTGCTGGCTTGCGAGCTGTGCAGCTGGTCCCCGGGCTCAGAGGAGTaGGAATGGGGTGGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LLLPSSTLLLACELCSWSPGSEE*EWGGSS
Trigger: GGAAGACCCACCCCATTCCCACTCCTCTGAGCCCGG...GGACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp GGTTGTTGCTGCCCTCCTCGACGTTGCTGCTGGCTTGCGAGCTGTGCAGCTGGTTTGGAGCTTGGAGCTTaGGGTGTCCCCTCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: GCCCPPRRCCWLASCAAGLELGA*GVPSGL
Trigger: GAGCCCGGAGGGGACACCCCAAGCTCCAAGCTCCAA...ACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR TCA 90 bp AAAGGTCATGGGGCCCAGCAGCCTGTGCTCGGTCTGGATGACGCAGTAGGCTGCGGCTCATGCACTGGGTaGGGTGGAGATGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: KGHGAQQPVLGLDDAVGCGSCTG*GGDASG
Trigger: GCCAGAAGCATCTCCACCTCACCCAGTGCATGAGCC...GCAGCCTACTGCGTCATCCAGACCGAGCACAGGCTGCTGGGCCCCATGACCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR TCA 90 bp GGTTGTTGCTGCCCTCCTCGACGTTGCTGCTGGCTTGCGAGCTGTGCAGCTGGTTGTGCTCGGTCTGGATaGCGCAGTAGGCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GCCCPPRRCCWLASCAAGCARSG*RSRLPA
Trigger: AGCAGGCAGCCTACTGCGTCATCCAGACCGAGCACA...ACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR TCA 90 bp GCCGTTTTGGGGGAAGAGCGAGTTGATCTGGCCTTGCAGCACCAGGTTGGGTGCGAGTGCAGGGGAGCATaGCGTAGAGAGGGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: AVLGEERVDLALQHQVGCECRGA*RREGGG
Trigger: GCCTCCACCCTCTCTACGTCATGCTCCCCTGCACTC...GCACCCAACCTGGTGCTGCAAGGCCAGATCAACTCGCTCTTCCCCCAAAACGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR TCA 90 bp GCCGTTTTGGGGGAAGAGCGAGTTGATCTGGCCTTGCAGCACCAGGTTGGGTGCGGAAAGAGTGCAGGCTaGAGAGGGGGATGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: AVLGEERVDLALQHQVGCGKSAG*RGGCPS
Trigger: GCTGGGGCATCCCCCTCTTCAGCCTGCACTCTTTCC...GCACCCAACCTGGTGCTGCAAGGCCAGATCAACTCGCTCTTCCCCCAAAACGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp CCCGAGCATGTGAGCCCCAGATGTGTCCTCCTCCCAACCCCTGCAACTCTCACCCCTCCTCGACGTTGCTaGTGGCTTGCGAGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: PEHVSPRCVLLPTPATLTPPRRC*WLASCA
Trigger: TGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGG...GGTGAGAGTTGCAGGGGTTGGGAGGAGGACACATCTGGGGCTCACATGCTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000577903.5
CDS-3UTR GCA 90 bp GACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCCCTCCTCCTCCCATCGGACACCATaGTCTCCCCCTTGGCATTGG +
Preference number: 4 (lower is better)
Translates to: DFNSPEAVPVAAAGRPSSSHRTP*SPPWHW
Trigger: CCAATGCCAAGGGGGAGAGCATGGTGTCCGATGGGA...GGAGGAGGGCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS-3UTR GCA 90 bp CCGATCGCTCACTGCCCTTGGCCAGGGCATAGCCACCACCCAGCAATAACACGATCCCATCGGACACCATaGTGTTGGTGGAGGGGGCGC +
Preference number: 4 (lower is better)
Translates to: PIAHCPWPGHSHHPAITRSHRTP*CWWRGR
Trigger: GCGCCCCCTCCACCAACAGCATGGTGTCCGATGGGA...TCGTGTTATTGCTGGGTGGTGGCTATGCCCTGGCCAAGGGCAGTGAGCGATCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577903.5
CDS-3UTR CCA 90 bp TTGGGGGAAGAGCGAGTTGATCTGGCCTTGCAGCACCAGGTTGGGTGCGGTGCCGGACGGCATGTGCGATaGGCACCATCATGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LGEERVDLALQHQVGCGAGRHVR*APSWLR
Trigger: CCTCAGCCATGATGGTGCCCATCGCACATGCCGTCC...GGCACCGCACCCAACCTGGTGCTGCAAGGCCAGATCAACTCGCTCTTCCCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp GGTTGTTGCTGCCCTCCTCGACGTTGCTGCTGGCTTGCGAGCTGTGCAGCTGGTCCTGGAGCTCGAAGGTaGGGTTGTTGCTGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GCCCPPRRCCWLASCAAGPGARR*GCCCPP
Trigger: AGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGG...ACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp GCGAGCTGTGCAGCTGGTCCAGGACGGCATGTGCGATGGGCACCATCATGGCTGGGGTTTTCTGGGTCCTaGGTCAGCCCTGGGAACTTG +
Preference number: 4 (lower is better)
Translates to: ASCAAGPGRHVRWAPSWLGFSGS*VSPGNL
Trigger: CAAGTTCCCAGGGCTGACCCAGGACCCAGAAAACCC...CAGCCATGATGGTGCCCATCGCACATGCCGTCCTGGACCAGCTGCACAGCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp CATGGGGCCCAGCAGCCTGTGCTCGGTCTGGATGACGCAGTAGGCTGCCTGCTGGATGATGGCAATGGCTaGAGCTGGCACACTCTGCAG +
Preference number: 4 (lower is better)
Translates to: HGAQQPVLGLDDAVGCLLDDGNG*SWHTLQ
Trigger: CTGCAGAGTGTGCCAGCTCCAGCCATTGCCATCATC...CAGCAGGCAGCCTACTGCGTCATCCAGACCGAGCACAGGCTGCTGGGCCCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp GGCCCGATCGCTCACTGCCCTTGGCCAGGGCATAGCCACCACCCAGCAATAACATGGAGGCAGATGGCCTaGGCCATGGAGGCTAGGATG +
Preference number: 4 (lower is better)
Translates to: GPIAHCPWPGHSHHPAITWRQMA*AMEARM
Trigger: CATCCTAGCCTCCATGGCCCAGGCCATCTGCCTCCA...TGTTATTGCTGGGTGGTGGCTATGCCCTGGCCAAGGGCAGTGAGCGATCGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp GCGAGCTGTGCAGCTGGTCCAGGACGGCATGTGCGATGGGCACCATCATGGCTGTTGGTGTGGTGGTGTTaGCCAGGCTTGGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: ASCAAGPGRHVRWAPSWLLVWWC*PGLAGT
Trigger: AGTGCCTGCCAAGCCTGGCCAACACCACCACACCAA...CAGCCATGATGGTGCCCATCGCACATGCCGTCCTGGACCAGCTGCACAGCTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR CAA 72 bp TGGGGACTTGGTTCCTGGAGCTCGAAGGTGGGGTTGTaGCTGCCCTCCTCGACGTTGCTGCTGGCTTGCGAG +
Preference number: 4 (lower is better)
Translates to: WGLGSWSSKVGL*LPSSTLLLACE
Trigger: CTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGGAACCAAGTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR TCA 90 bp GCCCATTATCAAGCTTGGTCACCTCCTTCTGGGGACTTGGTTCCTGGAGCTCGAGCCGCACCCCAACGATaGGGAGGACACGGAGGGCGA +
Preference number: 4 (lower is better)
Translates to: AHYQAWSPPSGDLVPGARAAPQR*GGHGGR
Trigger: TCGCCCTCCGTGTCCTCCTCATCGTTGGGGTGCGGC...TCGAGCTCCAGGAACCAAGTCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR TCA 90 bp GAAGAGGGGGATGCCCCAGCTGTTGATGGCCAGTGCGATGATCAGGACTCCAATCCGAAGAGGCAGACGTaGCAGGGAGGGCCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: EEGDAPAVDGQCDDQDSNPKRQT*QGGPAH
Trigger: ATGGGCAGGCCCTCCCTGTCACGTCTGCCTCTTCGG...ATTGGAGTCCTGATCATCGCACTGGCCATCAACAGCTGGGGCATCCCCCTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR TCA 90 bp AACCAGGAGGCGAAGTTCACCACGTTGCCGTTTTGGGGGAAGAGCGAGTTGATCAGCCCGGCTCCCGGGTaGACCAGAGCAGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: NQEAKFTTLPFWGKSELISPAPG*TRAAPG
Trigger: TCCTGGTGCTGCTCTGGTTCACCCGGGAGCCGGGCT...GATCAACTCGCTCTTCCCCCAAAACGGCAACGTGGTGAACTTCGCCTCCTGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR TCA 90 bp GCCGTTTTGGGGGAAGAGCGAGTTGATCTGGCCTTGCAGCACCAGGTTGGGTGCTCCTTCCCGAGCATGTaGGCCCCAGATGTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: AVLGEERVDLALQHQVGCSFPSM*APDVSS
Trigger: GGAGGACACATCTGGGGCTCACATGCTCGGGAAGGA...GCACCCAACCTGGTGCTGCAAGGCCAGATCAACTCGCTCTTCCCCCAAAACGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000577903.5
CDS-3UTR GCA 90 bp TCTGCAATGGGGGCCCTATACCCTTCCCTCCTTCCCGAGCATGTGAGCCCCAGAGTCCAGGACGGCATGTaGGATGGGCACCATCATGGC +
Preference number: 4 (lower is better)
Translates to: SAMGALYPSLLPEHVSPRVQDGM*DGHHHG
Trigger: GCCATGATGGTGCCCATCGCACATGCCGTCCTGGAC...TCTGGGGCTCACATGCTCGGGAAGGAGGGAAGGGTATAGGGCCCCCATTGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577903.5
CDS-3UTR GCA 90 bp CCTTCTGGGGACTTGGTTCCTGGAGCTCGAAGGTGGGGTTGTTGCTGCCCTCCTTGCCCTCCTCGACGTTaGTGCTGGCTTGCGAGCTGT +
Preference number: 4 (lower is better)
Translates to: PSGDLVPGARRWGCCCPPCPPRR*CWLASC
Trigger: ACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCA...AGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp GAAGAGGGGGATGCCCCAGCTGTTGATGGCCAGTGCGATGATCAGGACTCCAATCAGCACCAGGTTGGGTaGGGTGCCAGTCAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: EEGDAPAVDGQCDDQDSNQHQVG*GASQRG
Trigger: GCCACGCTGACTGGCACCGCACCCAACCTGGTGCTG...ATTGGAGTCCTGATCATCGCACTGGCCATCAACAGCTGGGGCATCCCCCTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp GATCTGGCCTTGCAGCACCAGGTTGGGTGCGGTGCCAGTCAGCGTGGCGATGCCGCCTGCTGTTGCTCCTaGATCTTTTCCCCAATGCCA +
Preference number: 4 (lower is better)
Translates to: DLALQHQVGCGASQRGDAACCCS*IFSPMP
Trigger: TGGCATTGGGGAAAAGATGCAGGAGCAACAGCAGGC...GGCATCGCCACGCTGACTGGCACCGCACCCAACCTGGTGCTGCAAGGCCAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp TGCCCATTATCAAGCTTGGTCACCTCCTTCTGGGGACTTGGTTCCTGGAGCTCGGGCATGGCCAGGCTGTaGCCCAGCCTAGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: CPLSSLVTSFWGLGSWSSGMARL*PSLGAW
Trigger: CCAAGCCCCTAGGCTGGGGCACAGCCTGGCCATGCC...CGAGCTCCAGGAACCAAGTCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp CCTTCTGGGGACTTGGTTCCTGGAGCTCGAAGGTGGGGTTGTTGCTGCCCTCCTTTAGCCGCTTGGGGTTaGTCAGGGCCACAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: PSGDLVPGARRWGCCCPPLAAWG*SGPQGG
Trigger: TCCACCCTGTGGCCCTGAGCAACCCCAAGCGGCTAA...AGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000577903.5
CDS-3UTR CCA 90 bp TCCCGAGCATGTGAGCCCCAGATGTGTCCTCCTCCCAACCCCTGCAACTCTCACCCTGGAGCTCGAAGGTaGGGTTGTTGCTGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: SRACEPQMCPPPNPCNSHPGARR*GCCCPP
Trigger: AGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGG...GTGAGAGTTGCAGGGGTTGGGAGGAGGACACATCTGGGGCTCACATGCTCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577903.5
CDS-3UTR CCA 90 bp CCCGAGCATGTGAGCCCCAGATGTGTCCTCCTCCCAACCCCTGCAACTCTCACCAGGTGGAGATGCTTCTaGCTGAGATGTGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: PEHVSPRCVLLPTPATLTRWRCF*LRCALP
Trigger: GGGGAGGGCACATCTCAGCCAGAAGCATCTCCACCT...GGTGAGAGTTGCAGGGGTTGGGAGGAGGACACATCTGGGGCTCACATGCTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577903.5
CDS-3UTR CCA 90 bp GACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCCCTCCTCCGTCCTGGGTCAGCCCTaGGAACTTGGAGGGTATGAT +
Preference number: 4 (lower is better)
Translates to: DFNSPEAVPVAAAGRPSSVLGQP*ELGGYD
Trigger: ATCATACCCTCCAAGTTCCCAGGGCTGACCCAGGAC...GGAGGAGGGCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS-3UTR CCA 90 bp GGCCCGATCGCTCACTGCCCTTGGCCAGGGCATAGCCACCACCCAGCAATAACAGGCCTTCAGCTTCCCTaGGTTTTCTGGGTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GPIAHCPWPGHSHHPAITGLQLP*VFWVLG
Trigger: ACCCAGGACCCAGAAAACCCAGGGAAGCTGAAGGCC...TGTTATTGCTGGGTGGTGGCTATGCCCTGGCCAAGGGCAGTGAGCGATCGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp GCCGTTTTGGGGGAAGAGCGAGTTGATCTGGCCTTGCAGCACCAGGTTGGGTGCTGGAGGCAGATGGCCTaGGCCATGGAGGCTAGGATG +
Preference number: 4 (lower is better)
Translates to: AVLGEERVDLALQHQVGCWRQMA*AMEARM
Trigger: CATCCTAGCCTCCATGGCCCAGGCCATCTGCCTCCA...GCACCCAACCTGGTGCTGCAAGGCCAGATCAACTCGCTCTTCCCCCAAAACGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp TTGGGGGAAGAGCGAGTTGATCTGGCCTTGCAGCACCAGGTTGGGTGCGGTGCCAGGCTTGGCAGGCACTaGGCTGTGGTGTTGGACTGT +
Preference number: 4 (lower is better)
Translates to: LGEERVDLALQHQVGCGARLGRH*AVVLDC
Trigger: ACAGTCCAACACCACAGCCCAGTGCCTGCCAAGCCT...GGCACCGCACCCAACCTGGTGCTGCAAGGCCAGATCAACTCGCTCTTCCCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp GATGGCCTTTTCTGCAAAGGTCATGGGGCCCAGCAGCCTGTGCTCGGTCTGGATCCCAGCCTAGGGGCTTaGTGTGGTGGTGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: DGLFCKGHGAQQPVLGLDPSLGA*CGGVGQ
Trigger: CTGGCCAACACCACCACACCAAGCCCCTAGGCTGGG...ATCCAGACCGAGCACAGGCTGCTGGGCCCCATGACCTTTGCAGAAAAGGCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp GATGGCCTTTTCTGCAAAGGTCATGGGGCCCAGCAGCCTGTGCTCGGTCTGGATTTGGAGCTTGGAGCTTaGGGTGTCCCCTCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: DGLFCKGHGAQQPVLGLDLELGA*GVPSGL
Trigger: GAGCCCGGAGGGGACACCCCAAGCTCCAAGCTCCAA...ATCCAGACCGAGCACAGGCTGCTGGGCCCCATGACCTTTGCAGAAAAGGCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
3UTR CAA 72 bp CTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTGGAGCTaGGGGTGTCCCCTCCGGGCTCAGAGGAGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: LSAFGLELGAWS*GCPLRAQRSGN
Trigger: ATTCCCACTCCTCTGAGCCCGGAGGGGACACCCCAAGCTCCAAGCTCCAAGCTCCAGGCCAAAGGCTGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
3UTR CAA 72 bp TTCTGGGGACTTGGTTCCTGGAGCTCGAAGGTGGGGTaGTTGCTGCCCTCCTCGACGTTGCTGCTGGCTTGC +
Preference number: 4 (lower is better)
Translates to: FWGLGSWSSKVG*LLPSSTLLLAC
Trigger: GCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGGAACCAAGTCCCCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR CAA 72 bp GTTGCCGTTTTGGGGGAAGAGCGAGTTGATCTGGCCTaGCAGCACCAGGTTGGGTGCGGTGCCAGTCAGCGT +
Preference number: 4 (lower is better)
Translates to: VAVLGEERVDLA*QHQVGCGASQR
Trigger: ACGCTGACTGGCACCGCACCCAACCTGGTGCTGCAAGGCCAGATCAACTCGCTCTTCCCCCAAAACGGCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR TCA 90 bp CCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGTGCACCCGAAGAGGCAGACGTaGCAGGGAGGGCCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: PGAPERACCIVCEHTRVHPKRQT*QGGPAH
Trigger: ATGGGCAGGCCCTCCCTGTCACGTCTGCCTCTTCGG...GTGCACACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR TCA 90 bp GCTCACTGCCCTTGGCCAGGGCATAGCCACCACCCAGCAATAACACGATATTCCGGAAAGAGTGCAGGCTaGAGAGGGGGATGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: AHCPWPGHSHHPAITRYSGKSAG*RGGCPS
Trigger: GCTGGGGCATCCCCCTCTTCAGCCTGCACTCTTTCC...GGAATATCGTGTTATTGCTGGGTGGTGGCTATGCCCTGGCCAAGGGCAGTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR TCA 90 bp CCAAGTGTTACCTCCTGTTCTGCAATGGGGGCCCTATACCCTTCCCTCCTTCCCGGAAAGAGTGCAGGCTaGAGAGGGGGATGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PSVTSCSAMGALYPSLLPGKSAG*RGGCPS
Trigger: GCTGGGGCATCCCCCTCTTCAGCCTGCACTCTTTCC...GGGAAGGAGGGAAGGGTATAGGGCCCCCATTGCAGAACAGGAGGTAACACTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000577903.5
CDS-3UTR GCA 90 bp GCCCATTATCAAGCTTGGTCACCTCCTTCTGGGGACTTGGTTCCTGGAGCTCGATGGCGATGCCCCCGATaGTGGCGGAGTAGCACACGC +
Preference number: 4 (lower is better)
Translates to: AHYQAWSPPSGDLVPGARWRCPR*WRSSTR
Trigger: GCGTGTGCTACTCCGCCAGCATCGGGGGCATCGCCA...TCGAGCTCCAGGAACCAAGTCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp GCCGTTTTGGGGGAAGAGCGAGTTGATCTGGCCTTGCAGCACCAGGTTGGGTGCGAGTTGATCTGGCCTTaGAGCACCAGGTTGGGTGCG +
Preference number: 4 (lower is better)
Translates to: AVLGEERVDLALQHQVGCELIWP*STRLGA
Trigger: CGCACCCAACCTGGTGCTGCAAGGCCAGATCAACTC...GCACCCAACCTGGTGCTGCAAGGCCAGATCAACTCGCTCTTCCCCCAAAACGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp GACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCCCTCCTCCGCCTGCTGTTGCTCCTaGATCTTTTCCCCAATGCCA +
Preference number: 4 (lower is better)
Translates to: DFNSPEAVPVAAAGRPSSACCCS*IFSPMP
Trigger: TGGCATTGGGGAAAAGATGCAGGAGCAACAGCAGGC...GGAGGAGGGCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS-3UTR GCA 90 bp CCCGAGCATGTGAGCCCCAGATGTGTCCTCCTCCCAACCCCTGCAACTCTCACCGCTGATGGCCTTTTCTaGAAAGGTCATGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PEHVSPRCVLLPTPATLTADGLF*KGHGAQ
Trigger: CTGGGCCCCATGACCTTTGCAGAAAAGGCCATCAGC...GGTGAGAGTTGCAGGGGTTGGGAGGAGGACACATCTGGGGCTCACATGCTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000577903.5
CDS-3UTR GCA 90 bp GCCGTTTTGGGGGAAGAGCGAGTTGATCTGGCCTTGCAGCACCAGGTTGGGTGCTCCCATCGGACACCATaGTCTCCCCCTTGGCATTGG +
Preference number: 4 (lower is better)
Translates to: AVLGEERVDLALQHQVGCSHRTP*SPPWHW
Trigger: CCAATGCCAAGGGGGAGAGCATGGTGTCCGATGGGA...GCACCCAACCTGGTGCTGCAAGGCCAGATCAACTCGCTCTTCCCCCAAAACGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp TTTAATGTGACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCGGCCCGATCGCTCACTaGCCTTGGCCAGGGCATAGC +
Preference number: 4 (lower is better)
Translates to: FNVTLTAQRLFPWQLLAGGPIAH*PWPGHS
Trigger: GCTATGCCCTGGCCAAGGGCAGTGAGCGATCGGGCC...GCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTCACATTAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS-3UTR GCA 90 bp CAGTGCGATGATCAGGACTCCAATGATGTTGAGGAGGAATCCTGCCCGGGCCATGGCCCGATCGCTCACTaGCCTTGGCCAGGGCATAGC +
Preference number: 4 (lower is better)
Translates to: QCDDQDSNDVEEESCPGHGPIAH*PWPGHS
Trigger: GCTATGCCCTGGCCAAGGGCAGTGAGCGATCGGGCC...ATGGCCCGGGCAGGATTCCTCCTCAACATCATTGGAGTCCTGATCATCGCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp TTGGGGGAAGAGCGAGTTGATCTGGCCTTGCAGCACCAGGTTGGGTGCGGTGCCGGAGCTGGCACACTCTaGAGTGGGGTCAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: LGEERVDLALQHQVGCGAGAGTL*SGVSLF
Trigger: AAACAAGCTGACCCCACTGCAGAGTGTGCCAGCTCC...GGCACCGCACCCAACCTGGTGCTGCAAGGCCAGATCAACTCGCTCTTCCCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp CATGGGGCCCAGCAGCCTGTGCTCGGTCTGGATGACGCAGTAGGCTGCCTGCTGGCTGTTGATGGCCAGTaGGATGATCAGGACTCCAAT +
Preference number: 4 (lower is better)
Translates to: HGAQQPVLGLDDAVGCLLAVDGQ*DDQDSN
Trigger: ATTGGAGTCCTGATCATCGCACTGGCCATCAACAGC...CAGCAGGCAGCCTACTGCGTCATCCAGACCGAGCACAGGCTGCTGGGCCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp CCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGTGCACTGTTCCCGTGGCAGCTaGTGGCAGGCCCTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: PGAPERACCIVCEHTRVHCSRGS*WQALLP
Trigger: TGGGAGGAGGGCCTGCCAGCAGCTGCCACGGGAACA...GTGCACACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS-3UTR CCA 90 bp GCCGTTTTGGGGGAAGAGCGAGTTGATCTGGCCTTGCAGCACCAGGTTGGGTGCTGGGGACTTGGTTCCTaGAGCTCGAAGGTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: AVLGEERVDLALQHQVGCWGLGS*SSKVGL
Trigger: CAACCCCACCTTCGAGCTCCAGGAACCAAGTCCCCA...GCACCCAACCTGGTGCTGCAAGGCCAGATCAACTCGCTCTTCCCCCAAAACGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp CCTTCTGGGGACTTGGTTCCTGGAGCTCGAAGGTGGGGTTGTTGCTGCCCTCCTTGGGGACTTGGTTCCTaGAGCTCGAAGGTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: PSGDLVPGARRWGCCCPPWGLGS*SSKVGL
Trigger: CAACCCCACCTTCGAGCTCCAGGAACCAAGTCCCCA...AGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp TTGTTGCTGCCCTCCTCGACGTTGCTGCTGGCTTGCGAGCTGTGCAGCTGGTCCCTCCTTCTGGGGACTTaGTTCCTGGAGCTCGAAGGT +
Preference number: 4 (lower is better)
Translates to: LLLPSSTLLLACELCSWSLLLGT*FLELEG
Trigger: ACCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGGAG...GGACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp TTGGGGGAAGAGCGAGTTGATCTGGCCTTGCAGCACCAGGTTGGGTGCGGTGCCCTCCTTCTGGGGACTTaGTTCCTGGAGCTCGAAGGT +
Preference number: 4 (lower is better)
Translates to: LGEERVDLALQHQVGCGALLLGT*FLELEG
Trigger: ACCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGGAG...GGCACCGCACCCAACCTGGTGCTGCAAGGCCAGATCAACTCGCTCTTCCCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp TTGTTGCTGCCCTCCTCGACGTTGCTGCTGGCTTGCGAGCTGTGCAGCTGGTCCTTGGTCACCTCCTTCTaGGGACTTGGTTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LLLPSSTLLLACELCSWSLVTSF*GLGSWS
Trigger: GCTCCAGGAACCAAGTCCCCAGAAGGAGGTGACCAA...GGACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp GCTCACTGCCCTTGGCCAGGGCATAGCCACCACCCAGCAATAACACGATATTCCCTTGCAGCACCAGGTTaGGTGCGGTGCCAGTCAGCG +
Preference number: 4 (lower is better)
Translates to: AHCPWPGHSHHPAITRYSLAAPG*VRCQSA
Trigger: CGCTGACTGGCACCGCACCCAACCTGGTGCTGCAAG...GGAATATCGTGTTATTGCTGGGTGGTGGCTATGCCCTGGCCAAGGGCAGTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp GAAGAGGGGGATGCCCCAGCTGTTGATGGCCAGTGCGATGATCAGGACTCCAATCTTGCAGCACCAGGTTaGGTGCGGTGCCAGTCAGCG +
Preference number: 4 (lower is better)
Translates to: EEGDAPAVDGQCDDQDSNLAAPG*VRCQSA
Trigger: CGCTGACTGGCACCGCACCCAACCTGGTGCTGCAAG...ATTGGAGTCCTGATCATCGCACTGGCCATCAACAGCTGGGGCATCCCCCTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp GACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCCCTCCTCCAAGAGCGAGTTGATCTaGCCTTGCAGCACCAGGTTG +
Preference number: 4 (lower is better)
Translates to: DFNSPEAVPVAAAGRPSSKSELI*PCSTRL
Trigger: CAACCTGGTGCTGCAAGGCCAGATCAACTCGCTCTT...GGAGGAGGGCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS-3UTR CCA 90 bp GGTTGTTGCTGCCCTCCTCGACGTTGCTGCTGGCTTGCGAGCTGTGCAGCTGGTTTTCTGCAAAGGTCATaGGGCCCAGCAGCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: GCCCPPRRCCWLASCAAGFLQRS*GPAACA
Trigger: AGCACAGGCTGCTGGGCCCCATGACCTTTGCAGAAA...ACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp TTGTTGCTGCCCTCCTCGACGTTGCTGCTGGCTTGCGAGCTGTGCAGCTGGTCCGTCCTGGGTCAGCCCTaGGAACTTGGAGGGTATGAT +
Preference number: 4 (lower is better)
Translates to: LLLPSSTLLLACELCSWSVLGQP*ELGGYD
Trigger: ATCATACCCTCCAAGTTCCCAGGGCTGACCCAGGAC...GGACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp GATGGCCTTTTCTGCAAAGGTCATGGGGCCCAGCAGCCTGTGCTCGGTCTGGATATCGCTCACTGCCCTTaGCCAGGGCATAGCCACCAC +
Preference number: 4 (lower is better)
Translates to: DGLFCKGHGAQQPVLGLDIAHCP*PGHSHH
Trigger: GTGGTGGCTATGCCCTGGCCAAGGGCAGTGAGCGAT...ATCCAGACCGAGCACAGGCTGCTGGGCCCCATGACCTTTGCAGAAAAGGCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp TCTGCAATGGGGGCCCTATACCCTTCCCTCCTTCCCGAGCATGTGAGCCCCAGATTGGTGTGGTGGTGTTaGCCAGGCTTGGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: SAMGALYPSLLPEHVSPRLVWWC*PGLAGT
Trigger: AGTGCCTGCCAAGCCTGGCCAACACCACCACACCAA...TCTGGGGCTCACATGCTCGGGAAGGAGGGAAGGGTATAGGGCCCCCATTGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577903.5
CDS-3UTR CCA 90 bp GCTGGCTTGCGAGCTGTGCAGCTGGTCCAGGACGGCATGTGCGATGGGCACCATTTTCAGCCTTTGGCCTaGAGCTTGGAGCTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: AGLRAVQLVQDGMCDGHHFQPLA*SLELGA
Trigger: AGCTCCAAGCTCCAAGCTCCAGGCCAAAGGCTGAAA...ATGGTGCCCATCGCACATGCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR TCA 90 bp ATTATGCCGATGAAGATGGCCACTGTCCCATCGGACACCATGCTCTCCCCCTTGGGAGATGCTTCTGGCTaGGATGTGCCCTCCCCTCCG +
Preference number: 4 (lower is better)
Translates to: IMPMKMATVPSDTMLSPLGDASG*DVPSPP
Trigger: CGGAGGGGAGGGCACATCTCAGCCAGAAGCATCTCC...CAAGGGGGAGAGCATGGTGTCCGATGGGACAGTGGCCATCTTCATCGGCATAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR TCA 90 bp CAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTGGGGCACCAGAGAGGGGAGATGCTTCTGGCTaGGATGTGCCCTCCCCTCCG +
Preference number: 4 (lower is better)
Translates to: QVSLVTKLGIPRPGAPERGDASG*DVPSPP
Trigger: CGGAGGGGAGGGCACATCTCAGCCAGAAGCATCTCC...CCTCTCTGGTGCCCCAGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTGGGGCACCAGAGAGGCTGGCTTGCGAGCTGTaGAGCTGGTCCAGGACGGCA +
Preference number: 4 (lower is better)
Translates to: QVSLVTKLGIPRPGAPERLACEL*SWSRTA
Trigger: TGCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAG...CCTCTCTGGTGCCCCAGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp TGCCCATTATCAAGCTTGGTCACCTCCTTCTGGGGACTTGGTTCCTGGAGCTCGCTGGCTTGCGAGCTGTaGAGCTGGTCCAGGACGGCA +
Preference number: 4 (lower is better)
Translates to: CPLSSLVTSFWGLGSWSSLACEL*SWSRTA
Trigger: TGCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAG...CGAGCTCCAGGAACCAAGTCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp AGGATGACGAATAGGATGCTGATGGCCTTTTCTGCAAAGGTCATGGGGCCCAGCCAGCACCAGGTTGGGTaGGGTGCCAGTCAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: RMTNRMLMAFSAKVMGPSQHQVG*GASQRG
Trigger: GCCACGCTGACTGGCACCGCACCCAACCTGGTGCTG...GCTGGGCCCCATGACCTTTGCAGAAAAGGCCATCAGCATCCTATTCGTCATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp CCTTCTGGGGACTTGGTTCCTGGAGCTCGAAGGTGGGGTTGTTGCTGCCCTCCTCGAAGTTCACCACGTTaGCGTTTTGGGGGAAGAGCG +
Preference number: 4 (lower is better)
Translates to: PSGDLVPGARRWGCCCPPRSSPR*RFGGRA
Trigger: CGCTCTTCCCCCAAAACGGCAACGTGGTGAACTTCG...AGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp CAAGACCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGGGCCCGATCGCTCACTaGCCTTGGCCAGGGCATAGC +
Preference number: 4 (lower is better)
Translates to: QDLGHQRGHVVLSVNTHVGPIAH*PWPGHS
Trigger: GCTATGCCCTGGCCAAGGGCAGTGAGCGATCGGGCC...CACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGGTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CATAGCCACCACCCAGCAATAACACGATATTCCACGGCATCTTCTGGTTCACCGGGCATGGCCAGGCTGTaGCCCAGCCTAGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: HSHHPAITRYSTASSGSPGMARL*PSLGAW
Trigger: CCAAGCCCCTAGGCTGGGGCACAGCCTGGCCATGCC...CGGTGAACCAGAAGATGCCGTGGAATATCGTGTTATTGCTGGGTGGTGGCTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp AACCAGGAGGCGAAGTTCACCACGTTGCCGTTTTGGGGGAAGAGCGAGTTGATCTGCGAGCTGTGCAGCTaGTCCAGGACGGCATGTGCG +
Preference number: 4 (lower is better)
Translates to: NQEAKFTTLPFWGKSELICELCS*SRTACA
Trigger: CGCACATGCCGTCCTGGACCAGCTGCACAGCTCGCA...GATCAACTCGCTCTTCCCCCAAAACGGCAACGTGGTGAACTTCGCCTCCTGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp CCTTCTGGGGACTTGGTTCCTGGAGCTCGAAGGTGGGGTTGTTGCTGCCCTCCTTTGGTCACCTCCTTCTaGGGACTTGGTTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PSGDLVPGARRWGCCCPPLVTSF*GLGSWS
Trigger: GCTCCAGGAACCAAGTCCCCAGAAGGAGGTGACCAA...AGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp AACCAGGAGGCGAAGTTCACCACGTTGCCGTTTTGGGGGAAGAGCGAGTTGATCCTTGCAGCACCAGGTTaGGTGCGGTGCCAGTCAGCG +
Preference number: 4 (lower is better)
Translates to: NQEAKFTTLPFWGKSELILAAPG*VRCQSA
Trigger: CGCTGACTGGCACCGCACCCAACCTGGTGCTGCAAG...GATCAACTCGCTCTTCCCCCAAAACGGCAACGTGGTGAACTTCGCCTCCTGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp GGTTGTTGCTGCCCTCCTCGACGTTGCTGCTGGCTTGCGAGCTGTGCAGCTGGTTTCCACGGCATCTTCTaGTTCACCGTCTTCCAGTCG +
Preference number: 4 (lower is better)
Translates to: GCCCPPRRCCWLASCAAGFHGIF*FTVFQS
Trigger: CGACTGGAAGACGGTGAACCAGAAGATGCCGTGGAA...ACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp GCTCACTGCCCTTGGCCAGGGCATAGCCACCACCCAGCAATAACACGATATTCCAGATGGCCTGGGCCATaGAGGCTAGGATGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: AHCPWPGHSHHPAITRYSRWPGP*RLGWAG
Trigger: TCCTGCCCATCCTAGCCTCCATGGCCCAGGCCATCT...GGAATATCGTGTTATTGCTGGGTGGTGGCTATGCCCTGGCCAAGGGCAGTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp CAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTGGGGCACCAGAGAGGGCAGGCACTGGGCTGTaGTGTTGGACTGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QVSLVTKLGIPRPGAPERAGTGL*CWTVPR
Trigger: CCTGGGCACAGTCCAACACCACAGCCCAGTGCCTGC...CCTCTCTGGTGCCCCAGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTGGGGCACCAGAGAGGGGAGTGGGAATGGGGTaGGTCTTCCTGGGCATGGCC +
Preference number: 4 (lower is better)
Translates to: QVSLVTKLGIPRPGAPERGVGMG*VFLGMA
Trigger: GGCCATGCCCAGGAAGACCCACCCCATTCCCACTCC...CCTCTCTGGTGCCCCAGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR TCA 90 bp ATGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCAGCCGCACCCCAACGATaGGGAGGACACGGAGGGCGA +
Preference number: 4 (lower is better)
Translates to: MQAHTYAHTHMHTPFIPAAAPQR*GGHGGR
Trigger: TCGCCCTCCGTGTCCTCCTCATCGTTGGGGTGCGGC...TGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR TCA 90 bp CAAGACCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGGGAGATGCTTCTGGCTaGGATGTGCCCTCCCCTCCG +
Preference number: 4 (lower is better)
Translates to: QDLGHQRGHVVLSVNTHVGDASG*DVPSPP
Trigger: CGGAGGGGAGGGCACATCTCAGCCAGAAGCATCTCC...CACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGGTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR TCA 90 bp CAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTGGGGCACCAGAGAGGGGCTCATGCACTGGGTaGGGTGGAGATGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: QVSLVTKLGIPRPGAPERGSCTG*GGDASG
Trigger: GCCAGAAGCATCTCCACCTCACCCAGTGCATGAGCC...CCTCTCTGGTGCCCCAGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR TCA 90 bp TGCCCATTATCAAGCTTGGTCACCTCCTTCTGGGGACTTGGTTCCTGGAGCTCGGGCTCATGCACTGGGTaGGGTGGAGATGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: CPLSSLVTSFWGLGSWSSGSCTG*GGDASG
Trigger: GCCAGAAGCATCTCCACCTCACCCAGTGCATGAGCC...CGAGCTCCAGGAACCAAGTCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR TCA 90 bp CCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGTGCACGGGGGAAGAGCGAGTTaGTCTGGCCTTGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: PGAPERACCIVCEHTRVHGGRAS*SGLAAP
Trigger: TGGTGCTGCAAGGCCAGATCAACTCGCTCTTCCCCC...GTGCACACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR TCA 90 bp TTTAATGTGACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCGGGGGAAGAGCGAGTTaGTCTGGCCTTGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: FNVTLTAQRLFPWQLLAGGGRAS*SGLAAP
Trigger: TGGTGCTGCAAGGCCAGATCAACTCGCTCTTCCCCC...GCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTCACATTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS-3UTR TCA 90 bp AACCAGGAGGCGAAGTTCACCACGTTGCCGTTTTGGGGGAAGAGCGAGTTGATCGGGGGAAGAGCGAGTTaGTCTGGCCTTGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: NQEAKFTTLPFWGKSELIGGRAS*SGLAAP
Trigger: TGGTGCTGCAAGGCCAGATCAACTCGCTCTTCCCCC...GATCAACTCGCTCTTCCCCCAAAACGGCAACGTGGTGAACTTCGCCTCCTGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR TCA 90 bp TTTAATGTGACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCGTTTCCCAGCCACTCTaGCAGGCCCGATCGCTCACT +
Preference number: 4 (lower is better)
Translates to: FNVTLTAQRLFPWQLLAGVSQPL*QARSLT
Trigger: AGTGAGCGATCGGGCCTGTCAGAGTGGCTGGGAAAC...GCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTCACATTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS-3UTR TCA 90 bp CCAGGGCATAGCCACCACCCAGCAATAACACGATATTCCACGGCATCTTCTGGTGAGTGCAGGGGAGCATaGCGTAGAGAGGGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: PGHSHHPAITRYSTASSGECRGA*RREGGG
Trigger: GCCTCCACCCTCTCTACGTCATGCTCCCCTGCACTC...ACCAGAAGATGCCGTGGAATATCGTGTTATTGCTGGGTGGTGGCTATGCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR TCA 90 bp CAAGACCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGGAGTGCAGGGGAGCATaGCGTAGAGAGGGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: QDLGHQRGHVVLSVNTHVECRGA*RREGGG
Trigger: GCCTCCACCCTCTCTACGTCATGCTCCCCTGCACTC...CACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGGTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR TCA 90 bp GCTGGCTTGCGAGCTGTGCAGCTGGTCCAGGACGGCATGTGCGATGGGCACCATCCATATCCAACACTTTaGGGTCCCCGAAAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: AGLRAVQLVQDGMCDGHHPYPTL*GPRKRR
Trigger: TCTTCTCTTTCGGGGACCTCAAAGTGTTGGATATGG...ATGGTGCCCATCGCACATGCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR TCA 90 bp GACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCCCTCCTCCCAGCACATAGGAAACTaGGCATACACCCCTTCCTTA +
Preference number: 4 (lower is better)
Translates to: DFNSPEAVPVAAAGRPSSQHIGN*AYTPSL
Trigger: TAAGGAAGGGGTGTATGCTCAGTTTCCTATGTGCTG...GGAGGAGGGCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS-3UTR TCA 90 bp GACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCCCTCCTCCGATGGAAATGGTCTCTaGATGATCTCAGAGGCATCC +
Preference number: 4 (lower is better)
Translates to: DFNSPEAVPVAAAGRPSSDGNGL*MISEAS
Trigger: GGATGCCTCTGAGATCATTCAGAGACCATTTCCATC...GGAGGAGGGCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444914.7
ENST00000459818.2
CDS-3UTR GCA 90 bp CAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTGGGGCACCAGAGAGGGGCTGCTACAGCCACTaGCTCCAGGAGCTGGGTAAC +
Preference number: 4 (lower is better)
Translates to: QVSLVTKLGIPRPGAPERGCYSH*LQELGN
Trigger: GTTACCCAGCTCCTGGAGGCAGTGGCTGTAGCAGCC...CCTCTCTGGTGCCCCAGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314669.10
ENST00000444914.7
CDS-3UTR GCA 90 bp CCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGTGCACAGGTGGGGTTGTTGCTaGCCTCCTCGACGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: PGAPERACCIVCEHTRVHRWGCC*PPRRCC
Trigger: GCAGCAACGTCGAGGAGGGCAGCAACAACCCCACCT...GTGCACACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTGGGGCACCAGAGAGGAGGTGGGGTTGTTGCTaGCCTCCTCGACGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: QVSLVTKLGIPRPGAPERRWGCC*PPRRCC
Trigger: GCAGCAACGTCGAGGAGGGCAGCAACAACCCCACCT...CCTCTCTGGTGCCCCAGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CAGTGCGATGATCAGGACTCCAATGATGTTGAGGAGGAATCCTGCCCGGGCCATCGAAGGTGGGGTTGTTaGTGCCCTCCTCGACGTTGC +
Preference number: 4 (lower is better)
Translates to: QCDDQDSNDVEEESCPGHRRWGC*CPPRRC
Trigger: GCAACGTCGAGGAGGGCAGCAACAACCCCACCTTCG...ATGGCCCGGGCAGGATTCCTCCTCAACATCATTGGAGTCCTGATCATCGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp CCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGTGCACCGAAGGTGGGGTTGTTaGTGCCCTCCTCGACGTTGC +
Preference number: 4 (lower is better)
Translates to: PGAPERACCIVCEHTRVHRRWGC*CPPRRC
Trigger: GCAACGTCGAGGAGGGCAGCAACAACCCCACCTTCG...GTGCACACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp TGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACTGGCGATGCCCCCGATaGTGGCGGAGTAGCACACGC +
Preference number: 4 (lower is better)
Translates to: CRRTHMRTHTCTHLLFQHWRCPR*WRSSTR
Trigger: GCGTGTGCTACTCCGCCAGCATCGGGGGCATCGCCA...GTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CATAGCCACCACCCAGCAATAACACGATATTCCACGGCATCTTCTGGTTCACCGCCAGGTTGGGTGCGGTaGCAGTCAGCGTGGCGATGC +
Preference number: 4 (lower is better)
Translates to: HSHHPAITRYSTASSGSPPGWVR*QSAWRC
Trigger: GCATCGCCACGCTGACTGGCACCGCACCCAACCTGG...CGGTGAACCAGAAGATGCCGTGGAATATCGTGTTATTGCTGGGTGGTGGCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp TGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACCAGCACCAGGTTGGGTaGGGTGCCAGTCAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: CRRTHMRTHTCTHLLFQHQHQVG*GASQRG
Trigger: GCCACGCTGACTGGCACCGCACCCAACCTGGTGCTG...GTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp GAAGAGGGGGATGCCCCAGCTGTTGATGGCCAGTGCGATGATCAGGACTCCAATGAGTTGATCTGGCCTTaGAGCACCAGGTTGGGTGCG +
Preference number: 4 (lower is better)
Translates to: EEGDAPAVDGQCDDQDSNELIWP*STRLGA
Trigger: CGCACCCAACCTGGTGCTGCAAGGCCAGATCAACTC...ATTGGAGTCCTGATCATCGCACTGGCCATCAACAGCTGGGGCATCCCCCTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp TTTAATGTGACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCCCCAGGAAGAGGATCTaGAGCCACAACCAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: FNVTLTAQRLFPWQLLAGPRKRI*SHNQAS
Trigger: GCTGGCCTGGTTGTGGCTGCAGATCCTCTTCCTGGG...GCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTCACATTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS-3UTR GCA 90 bp AGGATTAGCGGGGCAGGCCGCACCCCAACGATGAGGAGGACACGGAGGGCGATGGCATCTTTTCCCCAATaGCAAAGTTCTTCCGGAAGT +
Preference number: 4 (lower is better)
Translates to: RISGAGRTPTMRRTRRAMASFPQ*QSSSGS
Trigger: ACTTCCGGAAGAACTTTGGCATTGGGGAAAAGATGC...CATCGCCCTCCGTGTCCTCCTCATCGTTGGGGTGCGGCCTGCCCCGCTAATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp CCTTCTGGGGACTTGGTTCCTGGAGCTCGAAGGTGGGGTTGTTGCTGCCCTCCTTGTTACCTCCTGTTCTaGAATGGGGGCCCTATACCC +
Preference number: 4 (lower is better)
Translates to: PSGDLVPGARRWGCCCPPCYLLF*NGGPIP
Trigger: GGGTATAGGGCCCCCATTGCAGAACAGGAGGTAACA...AGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000577903.5
CDS-3UTR CCA 90 bp CAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTGGGGCACCAGAGAGGGGACGGCATGTGCGATaGGCACCATCATGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: QVSLVTKLGIPRPGAPERGRHVR*APSWLR
Trigger: CCTCAGCCATGATGGTGCCCATCGCACATGCCGTCC...CCTCTCTGGTGCCCCAGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CGCAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTGCGAGCTGTGCAGCTaGTCCAGGACGGCATGTGCG +
Preference number: 4 (lower is better)
Translates to: RKRLCTHVPFSLWPGAWSCELCS*SRTACA
Trigger: CGCACATGCCGTCCTGGACCAGCTGCACAGCTCGCA...GCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CGGGTGAACCAGAGCAGCACCAGGATGACGAATAGGATGCTGATGGCCTTTTCTTGCGAGCTGTGCAGCTaGTCCAGGACGGCATGTGCG +
Preference number: 4 (lower is better)
Translates to: RVNQSSTRMTNRMLMAFSCELCS*SRTACA
Trigger: CGCACATGCCGTCCTGGACCAGCTGCACAGCTCGCA...AGAAAAGGCCATCAGCATCCTATTCGTCATCCTGGTGCTGCTCTGGTTCACCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp CCTTCTGGGGACTTGGTTCCTGGAGCTCGAAGGTGGGGTTGTTGCTGCCCTCCTGCCCATTATCAAGCTTaGTCACCTCCTTCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: PSGDLVPGARRWGCCCPPAHYQA*SPPSGD
Trigger: GTCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGC...AGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp TCCCGAGCATGTGAGCCCCAGATGTGTCCTCCTCCCAACCCCTGCAACTCTCACTCTCCCCCTTGGCATTaGGAAAAGCCAAATTGCCCC +
Preference number: 4 (lower is better)
Translates to: SRACEPQMCPPPNPCNSHSPPWH*EKPNCP
Trigger: GGGGCAATTTGGCTTTTCCCAATGCCAAGGGGGAGA...GTGAGAGTTGCAGGGGTTGGGAGGAGGACACATCTGGGGCTCACATGCTCGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000577903.5
CDS-3UTR CCA 90 bp GAAGAGGGGGATGCCCCAGCTGTTGATGGCCAGTGCGATGATCAGGACTCCAATGGCCTTCAGCTTCCCTaGGTTTTCTGGGTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: EEGDAPAVDGQCDDQDSNGLQLP*VFWVLG
Trigger: ACCCAGGACCCAGAAAACCCAGGGAAGCTGAAGGCC...ATTGGAGTCCTGATCATCGCACTGGCCATCAACAGCTGGGGCATCCCCCTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp CAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTGGGGCACCAGAGAGGATCGCTCACTGCCCTTaGCCAGGGCATAGCCACCAC +
Preference number: 4 (lower is better)
Translates to: QVSLVTKLGIPRPGAPERIAHCP*PGHSHH
Trigger: GTGGTGGCTATGCCCTGGCCAAGGGCAGTGAGCGAT...CCTCTCTGGTGCCCCAGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTGGGGCACCAGAGAGGAGATGGCCTGGGCCATaGAGGCTAGGATGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: QVSLVTKLGIPRPGAPERRWPGP*RLGWAG
Trigger: TCCTGCCCATCCTAGCCTCCATGGCCCAGGCCATCT...CCTCTCTGGTGCCCCAGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CGCAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCGCAGGCACTGGGCTGTaGTGTTGGACTGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RKRLCTHVPFSLWPGAWSAGTGL*CWTVPR
Trigger: CCTGGGCACAGTCCAACACCACAGCCCAGTGCCTGC...GCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGTGCACCCTAGGGGCTTGGTGTaGTGGTGTTGGCCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: PGAPERACCIVCEHTRVHPRGLV*WCWPGL
Trigger: CAAGCCTGGCCAACACCACCACACCAAGCCCCTAGG...GTGCACACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CGCAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCCCCAGCCTAGGGGCTTaGTGTGGTGGTGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: RKRLCTHVPFSLWPGAWSPSLGA*CGGVGQ
Trigger: CTGGCCAACACCACCACACCAAGCCCCTAGGCTGGG...GCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp GCATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCGCGGCGGGAAGACCCTaGAGTCTCCCACGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: AYTPSLQTRKRLCTHVPFAAGRP*SLPRCP
Trigger: GGGGCACCGTGGGAGACTCCAGGGTCTTCCCGCCGC...GAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444914.7
CDS-3UTR CCA 90 bp GATGGCCTTTTCTGCAAAGGTCATGGGGCCCAGCAGCCTGTGCTCGGTCTGGATTCCCATAGACAAGCCTaGGGAACCTTCATCCCCCAC +
Preference number: 4 (lower is better)
Translates to: DGLFCKGHGAQQPVLGLDSHRQA*GTFIPH
Trigger: GTGGGGGATGAAGGTTCCCCAGGCTTGTCTATGGGA...ATCCAGACCGAGCACAGGCTGCTGGGCCCCATGACCTTTGCAGAAAAGGCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000577903.5
CDS-3UTR TCA 90 bp AGGATGACGAATAGGATGCTGATGGCCTTTTCTGCAAAGGTCATGGGGCCCAGCTGTGCTCGGTCTGGATaGCGCAGTAGGCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: RMTNRMLMAFSAKVMGPSCARSG*RSRLPA
Trigger: AGCAGGCAGCCTACTGCGTCATCCAGACCGAGCACA...GCTGGGCCCCATGACCTTTGCAGAAAAGGCCATCAGCATCCTATTCGTCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR TCA 90 bp GCATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGCCCGGCTCCCGGGTaGACCAGAGCAGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: AYTPSLQTRKRLCTHVPFSPAPG*TRAAPG
Trigger: TCCTGGTGCTGCTCTGGTTCACCCGGGAGCCGGGCT...GAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR TCA 90 bp AGGATGACGAATAGGATGCTGATGGCCTTTTCTGCAAAGGTCATGGGGCCCAGCGTTTCCCAGCCACTCTaGCAGGCCCGATCGCTCACT +
Preference number: 4 (lower is better)
Translates to: RMTNRMLMAFSAKVMGPSVSQPL*QARSLT
Trigger: AGTGAGCGATCGGGCCTGTCAGAGTGGCTGGGAAAC...GCTGGGCCCCATGACCTTTGCAGAAAAGGCCATCAGCATCCTATTCGTCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR TCA 90 bp ATGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCAAGGTGGAGACATGGCTaGGCGGCGGGAAGACCCTGG +
Preference number: 4 (lower is better)
Translates to: MQAHTYAHTHMHTPFIPARWRHG*AAGRPW
Trigger: CCAGGGTCTTCCCGCCGCTCAGCCATGTCTCCACCT...TGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444914.7
CDS-3UTR GCA 90 bp CAAGACCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGTGCCCTCCTCGACGTTaGTGCTGGCTTGCGAGCTGT +
Preference number: 4 (lower is better)
Translates to: QDLGHQRGHVVLSVNTHVCPPRR*CWLASC
Trigger: ACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCA...CACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGGTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp AAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTGCCAGGTTGGGTGCGGTaGCAGTCAGCGTGGCGATGC +
Preference number: 4 (lower is better)
Translates to: KRLCTHVPFSLWPGAWSLPGWVR*QSAWRC
Trigger: GCATCGCCACGCTGACTGGCACCGCACCCAACCTGG...CAAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CAAGACCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGCCCAGGAAGAGGATCTaGAGCCACAACCAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QDLGHQRGHVVLSVNTHVPRKRI*SHNQAS
Trigger: GCTGGCCTGGTTGTGGCTGCAGATCCTCTTCCTGGG...CACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGGTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CGGGTGAACCAGAGCAGCACCAGGATGACGAATAGGATGCTGATGGCCTTTTCTCCCAGGAAGAGGATCTaGAGCCACAACCAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RVNQSSTRMTNRMLMAFSPRKRI*SHNQAS
Trigger: GCTGGCCTGGTTGTGGCTGCAGATCCTCTTCCTGGG...AGAAAAGGCCATCAGCATCCTATTCGTCATCCTGGTGCTGCTCTGGTTCACCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp CAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTGGGCCCAGCAGCCTGTaGTCGGTCTGGATGACGCAG +
Preference number: 4 (lower is better)
Translates to: QEIMYTRAFQPLAWSLELGPSSL*SVWMTQ
Trigger: CTGCGTCATCCAGACCGAGCACAGGCTGCTGGGCCC...AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp TGCATCTTTTCCCCAATGCCAAAGTTCTTCCGGAAGTTGAAGCCCAGGAAGAGGGGGCCCAGCAGCCTGTaGTCGGTCTGGATGACGCAG +
Preference number: 4 (lower is better)
Translates to: CIFSPMPKFFRKLKPRKRGPSSL*SVWMTQ
Trigger: CTGCGTCATCCAGACCGAGCACAGGCTGCTGGGCCC...CCTCTTCCTGGGCTTCAACTTCCGGAAGAACTTTGGCATTGGGGAAAAGATGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp GCATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCGGCATGGCCAGGCTGTaGCCCAGCCTAGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: AYTPSLQTRKRLCTHVPFGMARL*PSLGAW
Trigger: CCAAGCCCCTAGGCTGGGGCACAGCCTGGCCATGCC...GAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp AACCAGGAGGCGAAGTTCACCACGTTGCCGTTTTGGGGGAAGAGCGAGTTGATCCACCCCTCACATCCATaGAGGCGCACACATATGCGC +
Preference number: 4 (lower is better)
Translates to: NQEAKFTTLPFWGKSELIHPSHP*RRTHMR
Trigger: GCGCATATGTGTGCGCCTGCATGGATGTGAGGGGTG...GATCAACTCGCTCTTCCCCCAAAACGGCAACGTGGTGAACTTCGCCTCCTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGCCTTGTTCCCGTGGCAGCTaGTGGCAGGCCCTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: HPFLTDTQEIMYTRAFQPCSRGS*WQALLP
Trigger: TGGGAGGAGGGCCTGCCAGCAGCTGCCACGGGAACA...AGGCTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS-3UTR GCA 90 bp CAAGACCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGTGGAGTCTCCCACGGTaGCCCCGAGGTTATGGGATG +
Preference number: 4 (lower is better)
Translates to: QDLGHQRGHVVLSVNTHVWSLPR*PRGYGM
Trigger: CATCCCATAACCTCGGGGGCACCGTGGGAGACTCCA...CACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGGTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444914.7
CDS-3UTR CCA 90 bp CAAGACCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGCAGGTGGCCATGGTGTaGAGCAGCAAGGGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: QDLGHQRGHVVLSVNTHVQVAMV*SSKGCY
Trigger: GTAGCAGCCCTTGCTGCTCCACACCATGGCCACCTG...CACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGGTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314669.10
ENST00000444914.7
CDS-3UTR CCA 90 bp CCAGGGCATAGCCACCACCCAGCAATAACACGATATTCCACGGCATCTTCTGGTCCTCGACGTTGCTGCTaGCTTGCGAGCTGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PGHSHHPAITRYSTASSGPRRCC*LASCAA
Trigger: AGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGG...ACCAGAAGATGCCGTGGAATATCGTGTTATTGCTGGGTGGTGGCTATGCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp CAAGACCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGCCTGGAGCTCGAAGGTaGGGTTGTTGCTGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: QDLGHQRGHVVLSVNTHVPGARR*GCCCPP
Trigger: AGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGG...CACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGGTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp GCCCATTATCAAGCTTGGTCACCTCCTTCTGGGGACTTGGTTCCTGGAGCTCGATGGGGACTTGGTTCCTaGAGCTCGAAGGTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: AHYQAWSPPSGDLVPGARWGLGS*SSKVGL
Trigger: CAACCCCACCTTCGAGCTCCAGGAACCAAGTCCCCA...TCGAGCTCCAGGAACCAAGTCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp GCCCATTATCAAGCTTGGTCACCTCCTTCTGGGGACTTGGTTCCTGGAGCTCGAAGGTGGAGATGCTTCTaGCTGAGATGTGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: AHYQAWSPPSGDLVPGARRWRCF*LRCALP
Trigger: GGGGAGGGCACATCTCAGCCAGAAGCATCTCCACCT...TCGAGCTCCAGGAACCAAGTCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp TGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACCTTGCAGCACCAGGTTaGGTGCGGTGCCAGTCAGCG +
Preference number: 4 (lower is better)
Translates to: CRRTHMRTHTCTHLLFQHLAAPG*VRCQSA
Trigger: CGCTGACTGGCACCGCACCCAACCTGGTGCTGCAAG...GTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp AACCAGGAGGCGAAGTTCACCACGTTGCCGTTTTGGGGGAAGAGCGAGTTGATCGGGTTTTCTGGGTCCTaGGTCAGCCCTGGGAACTTG +
Preference number: 4 (lower is better)
Translates to: NQEAKFTTLPFWGKSELIGFSGS*VSPGNL
Trigger: CAAGTTCCCAGGGCTGACCCAGGACCCAGAAAACCC...GATCAACTCGCTCTTCCCCCAAAACGGCAACGTGGTGAACTTCGCCTCCTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp CGCAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCATCGCTCACTGCCCTTaGCCAGGGCATAGCCACCAC +
Preference number: 4 (lower is better)
Translates to: RKRLCTHVPFSLWPGAWSIAHCP*PGHSHH
Trigger: GTGGTGGCTATGCCCTGGCCAAGGGCAGTGAGCGAT...GCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CGCAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTGGAGGCAGATGGCCTaGGCCATGGAGGCTAGGATG +
Preference number: 4 (lower is better)
Translates to: RKRLCTHVPFSLWPGAWSWRQMA*AMEARM
Trigger: CATCCTAGCCTCCATGGCCCAGGCCATCTGCCTCCA...GCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp TGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACGCAGGCACTGGGCTGTaGTGTTGGACTGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: CRRTHMRTHTCTHLLFQHAGTGL*CWTVPR
Trigger: CCTGGGCACAGTCCAACACCACAGCCCAGTGCCTGC...GTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp TGCCCATTATCAAGCTTGGTCACCTCCTTCTGGGGACTTGGTTCCTGGAGCTCGAGGCTTGGCAGGCACTaGGCTGTGGTGTTGGACTGT +
Preference number: 4 (lower is better)
Translates to: CPLSSLVTSFWGLGSWSSRLGRH*AVVLDC
Trigger: ACAGTCCAACACCACAGCCCAGTGCCTGCCAAGCCT...CGAGCTCCAGGAACCAAGTCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp CATAATTATGCCGATGAAGATGGCCACTGTCCCATCGGACACCATGCTCTCCCCCCTAGGGGCTTGGTGTaGTGGTGTTGGCCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: HNYADEDGHCPIGHHALPPRGLV*WCWPGL
Trigger: CAAGCCTGGCCAACACCACCACACCAAGCCCCTAGG...GGGGAGAGCATGGTGTCCGATGGGACAGTGGCCATCTTCATCGGCATAATTATG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CATAGCCACCACCCAGCAATAACACGATATTCCACGGCATCTTCTGGTTCACCGCCCAGCCTAGGGGCTTaGTGTGGTGGTGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: HSHHPAITRYSTASSGSPPSLGA*CGGVGQ
Trigger: CTGGCCAACACCACCACACCAAGCCCCTAGGCTGGG...CGGTGAACCAGAAGATGCCGTGGAATATCGTGTTATTGCTGGGTGGTGGCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp GACTCCAATGATGTTGAGGAGGAATCCTGCCCGGGCCATATCCAACACTTTGAGCCGGGCTCAGAGGAGTaGGAATGGGGTGGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: DSNDVEEESCPGHIQHFEPGSEE*EWGGSS
Trigger: GGAAGACCCACCCCATTCCCACTCCTCTGAGCCCGG...CTCAAAGTGTTGGATATGGCCCGGGCAGGATTCCTCCTCAACATCATTGGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTCAGAGGCTGTTCCCGTaGCAGCTGCTGGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: QEIMYTRAFQPLAWSLELQRLFP*QLLAGP
Trigger: AGGGCCTGCCAGCAGCTGCCACGGGAACAGCCTCTG...AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
3UTR CAA 72 bp GCCCATTATCAAGCTTGGTCACCTCCTTCTGGGGACTaGGTTCCTGGAGCTCGAAGGTGGGGTTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: AHYQAWSPPSGD*VPGARRWGCCC
Trigger: GCAGCAACAACCCCACCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR TCA 90 bp ATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGGCCGCACCCCAACGATaGGGAGGACACGGAGGGCGA +
Preference number: 4 (lower is better)
Translates to: IHPFLTDTQEIMYTRAFQAAPQR*GGHGGR
Trigger: TCGCCCTCCGTGTCCTCCTCATCGTTGGGGTGCGGC...CTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR TCA 90 bp CGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACATAGGACCGAAGAGGCAGACGTaGCAGGGAGGGCCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: RTHMRTHTCTHLLFQHIGPKRQT*QGGPAH
Trigger: ATGGGCAGGCCCTCCCTGTCACGTCTGCCTCTTCGG...TCCTATGTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR TCA 90 bp CACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGCCTGGAGATGCTTCTGGCTaGGATGTGCCCTCCCCTCCG +
Preference number: 4 (lower is better)
Translates to: HPFLTDTQEIMYTRAFQPGDASG*DVPSPP
Trigger: CGGAGGGGAGGGCACATCTCAGCCAGAAGCATCTCC...AGGCTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR TCA 90 bp ATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGAGCCCGGCTCCCGGGTaGACCAGAGCAGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: IHPFLTDTQEIMYTRAFQSPAPG*TRAAPG
Trigger: TCCTGGTGCTGCTCTGGTTCACCCGGGAGCCGGGCT...CTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR TCA 90 bp ATGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCAGAGTGCAGGGGAGCATaGCGTAGAGAGGGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: MQAHTYAHTHMHTPFIPAECRGA*RREGGG
Trigger: GCCTCCACCCTCTCTACGTCATGCTCCCCTGCACTC...TGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR TCA 90 bp AAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTGGGAAAGAGTGCAGGCTaGAGAGGGGGATGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: KRLCTHVPFSLWPGAWSLGKSAG*RGGCPS
Trigger: GCTGGGGCATCCCCCTCTTCAGCCTGCACTCTTTCC...CAAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp AACCAGGAGGCGAAGTTCACCACGTTGCCGTTTTGGGGGAAGAGCGAGTTGATCGGACACGGAGGGCGATaGGTTTATGCAGGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: NQEAKFTTLPFWGKSELIGHGGR*VYAGSS
Trigger: ACTGGAACCTGCATAAACGCATCGCCCTCCGTGTCC...GATCAACTCGCTCTTCCCCCAAAACGGCAACGTGGTGAACTTCGCCTCCTGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp TGTCCCATCGGACACCATGCTCTCCCCCTTGGCATTGGGAAAAGCCAAATTGCCGGACACGGAGGGCGATaGGTTTATGCAGGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: CPIGHHALPLGIGKSQIAGHGGR*VYAGSS
Trigger: ACTGGAACCTGCATAAACGCATCGCCCTCCGTGTCC...GGCAATTTGGCTTTTCCCAATGCCAAGGGGGAGAGCATGGTGTCCGATGGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp AAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTGCTGGCTTGCGAGCTGTaGAGCTGGTCCAGGACGGCA +
Preference number: 4 (lower is better)
Translates to: KRLCTHVPFSLWPGAWSLLACEL*SWSRTA
Trigger: TGCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAG...CAAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp TGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACTGCCCTCCTCGACGTTaGTGCTGGCTTGCGAGCTGT +
Preference number: 4 (lower is better)
Translates to: CRRTHMRTHTCTHLLFQHCPPRR*CWLASC
Trigger: ACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCA...GTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp ATTATGCCGATGAAGATGGCCACTGTCCCATCGGACACCATGCTCTCCCCCTTGTGGGTGAGGTGGAGATaGTTCTGGCTGAGATGTGCC +
Preference number: 4 (lower is better)
Translates to: IMPMKMATVPSDTMLSPLWVRWR*FWLRCA
Trigger: GGCACATCTCAGCCAGAAGCATCTCCACCTCACCCA...CAAGGGGGAGAGCATGGTGTCCGATGGGACAGTGGCCATCTTCATCGGCATAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp GCATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCCCAGGTTGGGTGCGGTaGCAGTCAGCGTGGCGATGC +
Preference number: 4 (lower is better)
Translates to: AYTPSLQTRKRLCTHVPFPGWVR*QSAWRC
Trigger: GCATCGCCACGCTGACTGGCACCGCACCCAACCTGG...GAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CAAGACCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGGAGTTGATCTGGCCTTaGAGCACCAGGTTGGGTGCG +
Preference number: 4 (lower is better)
Translates to: QDLGHQRGHVVLSVNTHVELIWP*STRLGA
Trigger: CGCACCCAACCTGGTGCTGCAAGGCCAGATCAACTC...CACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGGTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp TGTCCCATCGGACACCATGCTCTCCCCCTTGGCATTGGGAAAAGCCAAATTGCCCGAAGTTCACCACGTTaGCGTTTTGGGGGAAGAGCG +
Preference number: 4 (lower is better)
Translates to: CPIGHHALPLGIGKSQIARSSPR*RFGGRA
Trigger: CGCTCTTCCCCCAAAACGGCAACGTGGTGAACTTCG...GGCAATTTGGCTTTTCCCAATGCCAAGGGGGAGAGCATGGTGTCCGATGGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp TGCCCATTATCAAGCTTGGTCACCTCCTTCTGGGGACTTGGTTCCTGGAGCTCGCGAAGTTCACCACGTTaGCGTTTTGGGGGAAGAGCG +
Preference number: 4 (lower is better)
Translates to: CPLSSLVTSFWGLGSWSSRSSPR*RFGGRA
Trigger: CGCTCTTCCCCCAAAACGGCAACGTGGTGAACTTCG...CGAGCTCCAGGAACCAAGTCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp CCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGTGCACGATGACGCAGTAGGCTaGCTGCTGTTGCTCCTGCAT +
Preference number: 4 (lower is better)
Translates to: PGAPERACCIVCEHTRVHDDAVG*LLLLLH
Trigger: ATGCAGGAGCAACAGCAGGCAGCCTACTGCGTCATC...GTGCACACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp TGTCCCATCGGACACCATGCTCTCCCCCTTGGCATTGGGAAAAGCCAAATTGCCGATGACGCAGTAGGCTaGCTGCTGTTGCTCCTGCAT +
Preference number: 4 (lower is better)
Translates to: CPIGHHALPLGIGKSQIADDAVG*LLLLLH
Trigger: ATGCAGGAGCAACAGCAGGCAGCCTACTGCGTCATC...GGCAATTTGGCTTTTCCCAATGCCAAGGGGGAGAGCATGGTGTCCGATGGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp GCATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCGGGCCCAGCAGCCTGTaGTCGGTCTGGATGACGCAG +
Preference number: 4 (lower is better)
Translates to: AYTPSLQTRKRLCTHVPFGPSSL*SVWMTQ
Trigger: CTGCGTCATCCAGACCGAGCACAGGCTGCTGGGCCC...GAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CAGTGCGATGATCAGGACTCCAATGATGTTGAGGAGGAATCCTGCCCGGGCCATGCTGATGGCCTTTTCTaGAAAGGTCATGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: QCDDQDSNDVEEESCPGHADGLF*KGHGAQ
Trigger: CTGGGCCCCATGACCTTTGCAGAAAAGGCCATCAGC...ATGGCCCGGGCAGGATTCCTCCTCAACATCATTGGAGTCCTGATCATCGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp CCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGTGCACGGAGCTGGCACACTCTaGAGTGGGGTCAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: PGAPERACCIVCEHTRVHGAGTL*SGVSLF
Trigger: AAACAAGCTGACCCCACTGCAGAGTGTGCCAGCTCC...GTGCACACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp ATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGGGCATGGCCAGGCTGTaGCCCAGCCTAGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: IHPFLTDTQEIMYTRAFQGMARL*PSLGAW
Trigger: CCAAGCCCCTAGGCTGGGGCACAGCCTGGCCATGCC...CTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp AGGATGACGAATAGGATGCTGATGGCCTTTTCTGCAAAGGTCATGGGGCCCAGCCACCCCTCACATCCATaGAGGCGCACACATATGCGC +
Preference number: 4 (lower is better)
Translates to: RMTNRMLMAFSAKVMGPSHPSHP*RRTHMR
Trigger: GCGCATATGTGTGCGCCTGCATGGATGTGAGGGGTG...GCTGGGCCCCATGACCTTTGCAGAAAAGGCCATCAGCATCCTATTCGTCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp TTGGGGGAAGAGCGAGTTGATCTGGCCTTGCAGCACCAGGTTGGGTGCGGTGCCGTGAACACACACGTGTaGACTGTCCAACATACATAC +
Preference number: 4 (lower is better)
Translates to: LGEERVDLALQHQVGCGAVNTHV*TVQHTY
Trigger: GTATGTATGTTGGACAGTGCACACGTGTGTGTTCAC...GGCACCGCACCCAACCTGGTGCTGCAAGGCCAGATCAACTCGCTCTTCCCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp TTTAATGTGACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCCAGAAGGACCAAAGATaGAGCCAAGCAGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: FNVTLTAQRLFPWQLLAGQKDQR*SQAGRW
Trigger: CCACCTGCCTGCTTGGCTGCATCTTTGGTCCTTCTG...GCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTCACATTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444914.7
CDS-3UTR CCA 90 bp CATAGCCACCACCCAGCAATAACACGATATTCCACGGCATCTTCTGGTTCACCGCCTCGACGTTGCTGCTaGCTTGCGAGCTGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: HSHHPAITRYSTASSGSPPRRCC*LASCAA
Trigger: AGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGG...CGGTGAACCAGAAGATGCCGTGGAATATCGTGTTATTGCTGGGTGGTGGCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp TGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACCCTGGAGCTCGAAGGTaGGGTTGTTGCTGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: CRRTHMRTHTCTHLLFQHPGARR*GCCCPP
Trigger: AGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGG...GTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp GCCCATTATCAAGCTTGGTCACCTCCTTCTGGGGACTTGGTTCCTGGAGCTCGATTGGTCACCTCCTTCTaGGGACTTGGTTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: AHYQAWSPPSGDLVPGARLVTSF*GLGSWS
Trigger: GCTCCAGGAACCAAGTCCCCAGAAGGAGGTGACCAA...TCGAGCTCCAGGAACCAAGTCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp CCCACCAAGTGTTACCTCCTGTTCTGCAATGGGGGCCCTATACCCTTCCCTCCTAAGAGCGAGTTGATCTaGCCTTGCAGCACCAGGTTG +
Preference number: 4 (lower is better)
Translates to: PTKCYLLFCNGGPIPFPPKSELI*PCSTRL
Trigger: CAACCTGGTGCTGCAAGGCCAGATCAACTCGCTCTT...AGGAGGGAAGGGTATAGGGCCCCCATTGCAGAACAGGAGGTAACACTTGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577903.5
CDS-3UTR CCA 90 bp GAAGAGGGGGATGCCCCAGCTGTTGATGGCCAGTGCGATGATCAGGACTCCAATACCACGTTGCCGTTTTaGGGGAAGAGCGAGTTGATC +
Preference number: 4 (lower is better)
Translates to: EEGDAPAVDGQCDDQDSNTTLPF*GKSELI
Trigger: GATCAACTCGCTCTTCCCCCAAAACGGCAACGTGGT...ATTGGAGTCCTGATCATCGCACTGGCCATCAACAGCTGGGGCATCCCCCTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp TTTAATGTGACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCTTTCTGCAAAGGTCATaGGGCCCAGCAGCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: FNVTLTAQRLFPWQLLAGFLQRS*GPAACA
Trigger: AGCACAGGCTGCTGGGCCCCATGACCTTTGCAGAAA...GCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTCACATTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS-3UTR CCA 90 bp CCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGTGCACGTCCTGGGTCAGCCCTaGGAACTTGGAGGGTATGAT +
Preference number: 4 (lower is better)
Translates to: PGAPERACCIVCEHTRVHVLGQP*ELGGYD
Trigger: ATCATACCCTCCAAGTTCCCAGGGCTGACCCAGGAC...GTGCACACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CGCAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCCGAAAGAGAAGACGATaGCATTGGGCGGGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: RKRLCTHVPFSLWPGAWSRKRRR*HWAGWP
Trigger: TGGCCACCCCGCCCAATGCCATCGTCTTCTCTTTCG...GCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CGGGTGAACCAGAGCAGCACCAGGATGACGAATAGGATGCTGATGGCCTTTTCTCGAAAGAGAAGACGATaGCATTGGGCGGGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: RVNQSSTRMTNRMLMAFSRKRRR*HWAGWP
Trigger: TGGCCACCCCGCCCAATGCCATCGTCTTCTCTTTCG...AGAAAAGGCCATCAGCATCCTATTCGTCATCCTGGTGCTGCTCTGGTTCACCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp CAAGACCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGTTGGTGTGGTGGTGTTaGCCAGGCTTGGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: QDLGHQRGHVVLSVNTHVLVWWC*PGLAGT
Trigger: AGTGCCTGCCAAGCCTGGCCAACACCACCACACCAA...CACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGGTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTCCCAGCCTAGGGGCTTaGTGTGGTGGTGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: QEIMYTRAFQPLAWSLELPSLGA*CGGVGQ
Trigger: CTGGCCAACACCACCACACCAAGCCCCTAGGCTGGG...AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTCCGGGCTCAGAGGAGTaGGAATGGGGTGGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: QEIMYTRAFQPLAWSLELPGSEE*EWGGSS
Trigger: GGAAGACCCACCCCATTCCCACTCCTCTGAGCCCGG...AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp AAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTGTTGGAGCTTGGAGCTTaGGGTGTCCCCTCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: KRLCTHVPFSLWPGAWSLLELGA*GVPSGL
Trigger: GAGCCCGGAGGGGACACCCCAAGCTCCAAGCTCCAA...CAAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp TTTAATGTGACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCGTCTGGTCACTAAGCTaGGGATACCAAGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: FNVTLTAQRLFPWQLLAGVWSLS*GYQDLG
Trigger: CCCCAGGTCTTGGTATCCCCAGCTTAGTGACCAGAC...GCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTCACATTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS-3UTR CCA 90 bp CAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTGGGGCACCAGAGAGGGTCTGGTCACTAAGCTaGGGATACCAAGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: QVSLVTKLGIPRPGAPERVWSLS*GYQDLG
Trigger: CCCCAGGTCTTGGTATCCCCAGCTTAGTGACCAGAC...CCTCTCTGGTGCCCCAGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGCCTCCAAGCCACCTCCGCTaGCCCGGCCTTTCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: HPFLTDTQEIMYTRAFQPPSHLR*PGLSFL
Trigger: CAGAAAGGAAAGGCCGGGCCAGCGGAGGTGGCTTGG...AGGCTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444914.7
CDS-3UTR CCA 90 bp CACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGCCTTGGCAGGTGGAGACATaGCTGAGCGGCGGGAAGACC +
Preference number: 4 (lower is better)
Translates to: HPFLTDTQEIMYTRAFQPWQVET*LSGGKT
Trigger: GGTCTTCCCGCCGCTCAGCCATGTCTCCACCTGCCA...AGGCTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444914.7
CDS-3UTR CCA 90 bp CCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGTGCACAACATTCCCACAGACTaGCATTCCCCTGGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: PGAPERACCIVCEHTRVHNIPTD*HSPGLS
Trigger: CGAGAGCCCAGGGGAATGCCAGTCTGTGGGAATGTT...GTGCACACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459818.2
CDS-3UTR CCA 90 bp ATGATGAACATAATTATGCCGATGAAGATGGCCACTGTCCCATCGGACACCATGACACCATGCTGTTGGTaGAGGGGGCGCGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: MMNIIMPMKMATVPSDTMTPCCW*RGRGEG
Trigger: GCCCTCCCCGCGCCCCCTCCACCAACAGCATGGTGT...CATGGTGTCCGATGGGACAGTGGCCATCTTCATCGGCATAATTATGTTCATCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577903.5
3UTR CAA 72 bp TTGAGGAGGAATCCTGCCCGGGCCATATCCAACACTTaGAGGTCCCCGAAAGAGAAGACGATGGCATTGGGC +
Preference number: 4 (lower is better)
Translates to: LRRNPARAISNT*RSPKEKTMALG
Trigger: GCCCAATGCCATCGTCTTCTCTTTCGGGGACCTCAAAGTGTTGGATATGGCCCGGGCAGGATTCCTCCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR CAA 72 bp AAAGAGTGCAGGCTGAAGAGGGGGATGCCCCAGCTGTaGATGGCCAGTGCGATGATCAGGACTCCAATGATG +
Preference number: 4 (lower is better)
Translates to: KECRLKRGMPQL*MASAMIRTPMM
Trigger: CATCATTGGAGTCCTGATCATCGCACTGGCCATCAACAGCTGGGGCATCCCCCTCTTCAGCCTGCACTCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR TCA 90 bp AAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTGTGTGCTCGGTCTGGATaGCGCAGTAGGCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: KRLCTHVPFSLWPGAWSLCARSG*RSRLPA
Trigger: AGCAGGCAGCCTACTGCGTCATCCAGACCGAGCACA...CAAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR TCA 90 bp ATGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCATGTGCTCGGTCTGGATaGCGCAGTAGGCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: MQAHTYAHTHMHTPFIPACARSG*RSRLPA
Trigger: AGCAGGCAGCCTACTGCGTCATCCAGACCGAGCACA...TGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR TCA 90 bp CCTTCTGGGGACTTGGTTCCTGGAGCTCGAAGGTGGGGTTGTTGCTGCCCTCCTATGTTGTATTGTCTGTaGACACACACGTGTGCACTG +
Preference number: 4 (lower is better)
Translates to: PSGDLVPGARRWGCCCPPMLYCL*THTCAL
Trigger: CAGTGCACACGTGTGTGTTCACAGACAATACAACAT...AGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGTGCACAGGGCGATGCGTTTATaGAGGTTCCAGTGTTCCACC +
Preference number: 4 (lower is better)
Translates to: PGAPERACCIVCEHTRVHRAMRL*RFQCST
Trigger: GGTGGAACACTGGAACCTGCATAAACGCATCGCCCT...GTGCACACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp ATGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACCTCCTCGACGTTGCTaGTGGCTTGCGAGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: MQAHTYAHTHMHTPFIPAPPRRC*WLASCA
Trigger: TGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGG...TGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGCCTCCTCCTCGACGTTGCTaGTGGCTTGCGAGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: HPFLTDTQEIMYTRAFQPPPRRC*WLASCA
Trigger: TGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGG...AGGCTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp TGCATCTTTTCCCCAATGCCAAAGTTCTTCCGGAAGTTGAAGCCCAGGAAGAGGAGGTGGGGTTGTTGCTaGCCTCCTCGACGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: CIFSPMPKFFRKLKPRKRRWGCC*PPRRCC
Trigger: GCAGCAACGTCGAGGAGGGCAGCAACAACCCCACCT...CCTCTTCCTGGGCTTCAACTTCCGGAAGAACTTTGGCATTGGGGAAAAGATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp ATGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCAAGGTGGGGTTGTTGCTaGCCTCCTCGACGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: MQAHTYAHTHMHTPFIPARWGCC*PPRRCC
Trigger: GCAGCAACGTCGAGGAGGGCAGCAACAACCCCACCT...TGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp AAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTGCGAAGGTGGGGTTGTTaGTGCCCTCCTCGACGTTGC +
Preference number: 4 (lower is better)
Translates to: KRLCTHVPFSLWPGAWSLRRWGC*CPPRRC
Trigger: GCAACGTCGAGGAGGGCAGCAACAACCCCACCTTCG...CAAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CAAGACCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGGTGACAGGGAGGGCCTaGCCATTATCAAGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: QDLGHQRGHVVLSVNTHVVTGRA*PLSSLV
Trigger: GACCAAGCTTGATAATGGGCAGGCCCTCCCTGTCAC...CACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGGTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CCAGGGCATAGCCACCACCCAGCAATAACACGATATTCCACGGCATCTTCTGGTGTGACAGGGAGGGCCTaGCCATTATCAAGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: PGHSHHPAITRYSTASSGVTGRA*PLSSLV
Trigger: GACCAAGCTTGATAATGGGCAGGCCCTCCCTGTCAC...ACCAGAAGATGCCGTGGAATATCGTGTTATTGCTGGGTGGTGGCTATGCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp TCCCATAGACAAGCCTGGGGAACCTTCATCCCCCACCAAGTGTTACCTCCTGTTGTGACAGGGAGGGCCTaGCCATTATCAAGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: SHRQAWGTFIPHQVLPPVVTGRA*PLSSLV
Trigger: GACCAAGCTTGATAATGGGCAGGCCCTCCCTGTCAC...AACAGGAGGTAACACTTGGTGGGGGATGAAGGTTCCCCAGGCTTGTCTATGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577903.5
CDS-3UTR GCA 90 bp ATGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACTTCTGGCTGAGATGTaGCCTCCCCTCCGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: MQAHTYAHTHMHTPFIPALLAEM*PPLRRG
Trigger: GCCTCTTCGGAGGGGAGGGCACATCTCAGCCAGAAG...TGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGCCTCTTCTGGCTGAGATGTaGCCTCCCCTCCGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: HPFLTDTQEIMYTRAFQPLLAEM*PPLRRG
Trigger: GCCTCTTCGGAGGGGAGGGCACATCTCAGCCAGAAG...AGGCTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTCTTCTGGCTGAGATGTaGCCTCCCCTCCGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: QEIMYTRAFQPLAWSLELLLAEM*PPLRRG
Trigger: GCCTCTTCGGAGGGGAGGGCACATCTCAGCCAGAAG...AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CGCAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTGGGTGAGGTGGAGATaGTTCTGGCTGAGATGTGCC +
Preference number: 4 (lower is better)
Translates to: RKRLCTHVPFSLWPGAWSWVRWR*FWLRCA
Trigger: GGCACATCTCAGCCAGAAGCATCTCCACCTCACCCA...GCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CGGGTGAACCAGAGCAGCACCAGGATGACGAATAGGATGCTGATGGCCTTTTCTTGGGTGAGGTGGAGATaGTTCTGGCTGAGATGTGCC +
Preference number: 4 (lower is better)
Translates to: RVNQSSTRMTNRMLMAFSWVRWR*FWLRCA
Trigger: GGCACATCTCAGCCAGAAGCATCTCCACCTCACCCA...AGAAAAGGCCATCAGCATCCTATTCGTCATCCTGGTGCTGCTCTGGTTCACCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp TCCCATAGACAAGCCTGGGGAACCTTCATCCCCCACCAAGTGTTACCTCCTGTTTGGGTGAGGTGGAGATaGTTCTGGCTGAGATGTGCC +
Preference number: 4 (lower is better)
Translates to: SHRQAWGTFIPHQVLPPVWVRWR*FWLRCA
Trigger: GGCACATCTCAGCCAGAAGCATCTCCACCTCACCCA...AACAGGAGGTAACACTTGGTGGGGGATGAAGGTTCCCCAGGCTTGTCTATGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577903.5
CDS-3UTR GCA 90 bp CATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCACAGCACCAGGTTGGGTaGGGTGCCAGTCAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: HTPLPYRHARDYVHTCLSQHQVG*GASQRG
Trigger: GCCACGCTGACTGGCACCGCACCCAACCTGGTGCTG...TGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp TGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACGAGTTGATCTGGCCTTaGAGCACCAGGTTGGGTGCG +
Preference number: 4 (lower is better)
Translates to: CRRTHMRTHTCTHLLFQHELIWP*STRLGA
Trigger: CGCACCCAACCTGGTGCTGCAAGGCCAGATCAACTC...GTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CGCAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCCGAAGTTCACCACGTTaGCGTTTTGGGGGAAGAGCG +
Preference number: 4 (lower is better)
Translates to: RKRLCTHVPFSLWPGAWSRSSPR*RFGGRA
Trigger: CGCTCTTCCCCCAAAACGGCAACGTGGTGAACTTCG...GCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp TTTAATGTGACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCGCCTGCTGTTGCTCCTaGATCTTTTCCCCAATGCCA +
Preference number: 4 (lower is better)
Translates to: FNVTLTAQRLFPWQLLAGACCCS*IFSPMP
Trigger: TGGCATTGGGGAAAAGATGCAGGAGCAACAGCAGGC...GCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTCACATTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS-3UTR GCA 90 bp CATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGGGCCCAGCAGCCTGTaGTCGGTCTGGATGACGCAG +
Preference number: 4 (lower is better)
Translates to: HTPLPYRHARDYVHTCLSGPSSL*SVWMTQ
Trigger: CTGCGTCATCCAGACCGAGCACAGGCTGCTGGGCCC...TGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp TGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACCACCCCTCACATCCATaGAGGCGCACACATATGCGC +
Preference number: 4 (lower is better)
Translates to: CRRTHMRTHTCTHLLFQHHPSHP*RRTHMR
Trigger: GCGCATATGTGTGCGCCTGCATGGATGTGAGGGGTG...GTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCATGTTCCCGTGGCAGCTaGTGGCAGGCCCTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: HTPLPYRHARDYVHTCLSCSRGS*WQALLP
Trigger: TGGGAGGAGGGCCTGCCAGCAGCTGCCACGGGAACA...TGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS-3UTR CCA 90 bp CAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTGGACGGCATGTGCGATaGGCACCATCATGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: QEIMYTRAFQPLAWSLELGRHVR*APSWLR
Trigger: CCTCAGCCATGATGGTGCCCATCGCACATGCCGTCC...AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGCCTCCTCGACGTTGCTGCTaGCTTGCGAGCTGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: HPFLTDTQEIMYTRAFQPPRRCC*LASCAA
Trigger: AGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGG...AGGCTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CAAGACCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGCTCCTTCTGGGGACTTaGTTCCTGGAGCTCGAAGGT +
Preference number: 4 (lower is better)
Translates to: QDLGHQRGHVVLSVNTHVLLLGT*FLELEG
Trigger: ACCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGGAG...CACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGGTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTGGGGCACCAGAGAGGGCCCATTATCAAGCTTaGTCACCTCCTTCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: QVSLVTKLGIPRPGAPERAHYQA*SPPSGD
Trigger: GTCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGC...CCTCTCTGGTGCCCCAGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp TTTAATGTGACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCGCCCATTATCAAGCTTaGTCACCTCCTTCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: FNVTLTAQRLFPWQLLAGAHYQA*SPPSGD
Trigger: GTCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGC...GCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTCACATTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS-3UTR CCA 90 bp TGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACAGGTGGAGATGCTTCTaGCTGAGATGTGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: CRRTHMRTHTCTHLLFQHRWRCF*LRCALP
Trigger: GGGGAGGGCACATCTCAGCCAGAAGCATCTCCACCT...GTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp TTTAATGTGACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCATGCACTGGGTGAGGTaGAGATGCTTCTGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: FNVTLTAQRLFPWQLLAGMHWVR*RCFWLR
Trigger: TCTCAGCCAGAAGCATCTCCACCTCACCCAGTGCAT...GCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTCACATTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS-3UTR CCA 90 bp CAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTGGGGCACCAGAGAGGATGCACTGGGTGAGGTaGAGATGCTTCTGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: QVSLVTKLGIPRPGAPERMHWVR*RCFWLR
Trigger: TCTCAGCCAGAAGCATCTCCACCTCACCCAGTGCAT...CCTCTCTGGTGCCCCAGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CGGGTGAACCAGAGCAGCACCAGGATGACGAATAGGATGCTGATGGCCTTTTCTCACAGGCTCATGCACTaGGTGAGGTGGAGATGCTTC +
Preference number: 4 (lower is better)
Translates to: RVNQSSTRMTNRMLMAFSHRLMH*VRWRCF
Trigger: GAAGCATCTCCACCTCACCCAGTGCATGAGCCTGTG...AGAAAAGGCCATCAGCATCCTATTCGTCATCCTGGTGCTGCTCTGGTTCACCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp GCATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCCTTGCAGCACCAGGTTaGGTGCGGTGCCAGTCAGCG +
Preference number: 4 (lower is better)
Translates to: AYTPSLQTRKRLCTHVPFLAAPG*VRCQSA
Trigger: CGCTGACTGGCACCGCACCCAACCTGGTGCTGCAAG...GAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CGCAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTTCTGCAAAGGTCATaGGGCCCAGCAGCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: RKRLCTHVPFSLWPGAWSFLQRS*GPAACA
Trigger: AGCACAGGCTGCTGGGCCCCATGACCTTTGCAGAAA...GCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTGGGGCACCAGAGAGGTCTCCCCCTTGGCATTaGGAAAAGCCAAATTGCCCC +
Preference number: 4 (lower is better)
Translates to: QVSLVTKLGIPRPGAPERSPPWH*EKPNCP
Trigger: GGGGCAATTTGGCTTTTCCCAATGCCAAGGGGGAGA...CCTCTCTGGTGCCCCAGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CGCAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCGTCCTGGGTCAGCCCTaGGAACTTGGAGGGTATGAT +
Preference number: 4 (lower is better)
Translates to: RKRLCTHVPFSLWPGAWSVLGQP*ELGGYD
Trigger: ATCATACCCTCCAAGTTCCCAGGGCTGACCCAGGAC...GCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGCCTGGCAATGGCTGGAGCTaGCACACTCTGCAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: HPFLTDTQEIMYTRAFQPGNGWS*HTLQWG
Trigger: ACCCCACTGCAGAGTGTGCCAGCTCCAGCCATTGCC...AGGCTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp ATGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCAGGCAATGGCTGGAGCTaGCACACTCTGCAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: MQAHTYAHTHMHTPFIPAGNGWS*HTLQWG
Trigger: ACCCCACTGCAGAGTGTGCCAGCTCCAGCCATTGCC...TGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp ATGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCATGGAGGCAGATGGCCTaGGCCATGGAGGCTAGGATG +
Preference number: 4 (lower is better)
Translates to: MQAHTYAHTHMHTPFIPAWRQMA*AMEARM
Trigger: CATCCTAGCCTCCATGGCCCAGGCCATCTGCCTCCA...TGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CACCCAGCAATAACACGATATTCCACGGCATCTTCTGGTTCACCGTCTTCCAGTCCTAGGGGCTTGGTGTaGTGGTGTTGGCCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: HPAITRYSTASSGSPSSSPRGLV*WCWPGL
Trigger: CAAGCCTGGCCAACACCACCACACCAAGCCCCTAGG...ACTGGAAGACGGTGAACCAGAAGATGCCGTGGAATATCGTGTTATTGCTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp CAGCCCTGGGAACTTGGAGGGTATGATGAACATAATTATGCCGATGAAGATGGCGGAGTGGGAATGGGGTaGGTCTTCCTGGGCATGGCC +
Preference number: 4 (lower is better)
Translates to: QPWELGGYDEHNYADEDGGVGMG*VFLGMA
Trigger: GGCCATGCCCAGGAAGACCCACCCCATTCCCACTCC...GCCATCTTCATCGGCATAATTATGTTCATCATACCCTCCAAGTTCCCAGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGCCTCTGGAGCTTGGAGCTTaGAGCTTGGGGTGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: HPFLTDTQEIMYTRAFQPLELGA*SLGCPL
Trigger: GAGGGGACACCCCAAGCTCCAAGCTCCAAGCTCCAG...AGGCTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGTGCACTTTCAGCCTTTGGCCTaGAGCTTGGAGCTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: PGAPERACCIVCEHTRVHFQPLA*SLELGA
Trigger: AGCTCCAAGCTCCAAGCTCCAGGCCAAAGGCTGAAA...GTGCACACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CAAGACCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGGTCTGGTCACTAAGCTaGGGATACCAAGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: QDLGHQRGHVVLSVNTHVVWSLS*GYQDLG
Trigger: CCCCAGGTCTTGGTATCCCCAGCTTAGTGACCAGAC...CACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGGTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp ATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGCAGAGGCTGTTCCCGTaGCAGCTGCTGGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: IHPFLTDTQEIMYTRAFQQRLFP*QLLAGP
Trigger: AGGGCCTGCCAGCAGCTGCCACGGGAACAGCCTCTG...CTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS-3UTR CCA 90 bp TGCCCATTATCAAGCTTGGTCACCTCCTTCTGGGGACTTGGTTCCTGGAGCTCGCATTTCACAGCTTACTaGGGACGAGGATGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: CPLSSLVTSFWGLGSWSSHFTAY*GRGWAE
Trigger: CTCTGCCCATCCTCGTCCCCAGTAAGCTGTGAAATG...CGAGCTCCAGGAACCAAGTCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR TCA 90 bp TCAATAAATACAGTGCAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTGCCGCACCCCAACGATaGGGAGGACACGGAGGGCGA +
Preference number: 4 (lower is better)
Translates to: SINTVQVSLVTKLGIPRPAAPQR*GGHGGR
Trigger: TCGCCCTCCGTGTCCTCCTCATCGTTGGGGTGCGGC...AGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTGCACTGTATTTATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR TCA 90 bp GAGGGTATGATGAACATAATTATGCCGATGAAGATGGCCACTGTCCCATCGGACGTTTCCCAGCCACTCTaGCAGGCCCGATCGCTCACT +
Preference number: 4 (lower is better)
Translates to: EGMMNIIMPMKMATVPSDVSQPL*QARSLT
Trigger: AGTGAGCGATCGGGCCTGTCAGAGTGGCTGGGAAAC...GTCCGATGGGACAGTGGCCATCTTCATCGGCATAATTATGTTCATCATACCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR TCA 90 bp CATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGGAAAGAGTGCAGGCTaGAGAGGGGGATGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: HTPLPYRHARDYVHTCLSGKSAG*RGGCPS
Trigger: GCTGGGGCATCCCCCTCTTCAGCCTGCACTCTTTCC...TGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp TGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACGGACACGGAGGGCGATaGGTTTATGCAGGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: CRRTHMRTHTCTHLLFQHGHGGR*VYAGSS
Trigger: ACTGGAACCTGCATAAACGCATCGCCCTCCGTGTCC...GTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp GACTCCAATGATGTTGAGGAGGAATCCTGCCCGGGCCATATCCAACACTTTGAGGGACACGGAGGGCGATaGGTTTATGCAGGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: DSNDVEEESCPGHIQHFEGHGGR*VYAGSS
Trigger: ACTGGAACCTGCATAAACGCATCGCCCTCCGTGTCC...CTCAAAGTGTTGGATATGGCCCGGGCAGGATTCCTCCTCAACATCATTGGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp GCATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCGTCCAGGACGGCATGTaGGATGGGCACCATCATGGC +
Preference number: 4 (lower is better)
Translates to: AYTPSLQTRKRLCTHVPFVQDGM*DGHHHG
Trigger: GCCATGATGGTGCCCATCGCACATGCCGTCCTGGAC...GAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACATAGGAGTCCAGGACGGCATGTaGGATGGGCACCATCATGGC +
Preference number: 4 (lower is better)
Translates to: RTHMRTHTCTHLLFQHIGVQDGM*DGHHHG
Trigger: GCCATGATGGTGCCCATCGCACATGCCGTCCTGGAC...TCCTATGTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp ATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGCTGGCTTGCGAGCTGTaGAGCTGGTCCAGGACGGCA +
Preference number: 4 (lower is better)
Translates to: IHPFLTDTQEIMYTRAFQLACEL*SWSRTA
Trigger: TGCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAG...CTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CACCCAGCAATAACACGATATTCCACGGCATCTTCTGGTTCACCGTCTTCCAGTGAGTTGATCTGGCCTTaGAGCACCAGGTTGGGTGCG +
Preference number: 4 (lower is better)
Translates to: HPAITRYSTASSGSPSSSELIWP*STRLGA
Trigger: CGCACCCAACCTGGTGCTGCAAGGCCAGATCAACTC...ACTGGAAGACGGTGAACCAGAAGATGCCGTGGAATATCGTGTTATTGCTGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp TGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACCGAAGTTCACCACGTTaGCGTTTTGGGGGAAGAGCG +
Preference number: 4 (lower is better)
Translates to: CRRTHMRTHTCTHLLFQHRSSPR*RFGGRA
Trigger: CGCTCTTCCCCCAAAACGGCAACGTGGTGAACTTCG...GTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CAGCCCTGGGAACTTGGAGGGTATGATGAACATAATTATGCCGATGAAGATGGCCCCAGGAAGAGGATCTaGAGCCACAACCAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QPWELGGYDEHNYADEDGPRKRI*SHNQAS
Trigger: GCTGGCCTGGTTGTGGCTGCAGATCCTCTTCCTGGG...GCCATCTTCATCGGCATAATTATGTTCATCATACCCTCCAAGTTCCCAGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp GATGGCCTTTTCTGCAAAGGTCATGGGGCCCAGCAGCCTGTGCTCGGTCTGGATGCATCTTTTCCCCAATaGCAAAGTTCTTCCGGAAGT +
Preference number: 4 (lower is better)
Translates to: DGLFCKGHGAQQPVLGLDASFPQ*QSSSGS
Trigger: ACTTCCGGAAGAACTTTGGCATTGGGGAAAAGATGC...ATCCAGACCGAGCACAGGCTGCTGGGCCCCATGACCTTTGCAGAAAAGGCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp TGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACGCTGATGGCCTTTTCTaGAAAGGTCATGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: CRRTHMRTHTCTHLLFQHADGLF*KGHGAQ
Trigger: CTGGGCCCCATGACCTTTGCAGAAAAGGCCATCAGC...GTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp GACTCCAATGATGTTGAGGAGGAATCCTGCCCGGGCCATATCCAACACTTTGAGGCTGATGGCCTTTTCTaGAAAGGTCATGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: DSNDVEEESCPGHIQHFEADGLF*KGHGAQ
Trigger: CTGGGCCCCATGACCTTTGCAGAAAAGGCCATCAGC...CTCAAAGTGTTGGATATGGCCCGGGCAGGATTCCTCCTCAACATCATTGGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp GACTCCAATGATGTTGAGGAGGAATCCTGCCCGGGCCATATCCAACACTTTGAGGTTGAGGAGGAATCCTaGCCGGGCCATATCCAACAC +
Preference number: 4 (lower is better)
Translates to: DSNDVEEESCPGHIQHFEVEEES*PGHIQH
Trigger: GTGTTGGATATGGCCCGGGCAGGATTCCTCCTCAAC...CTCAAAGTGTTGGATATGGCCCGGGCAGGATTCCTCCTCAACATCATTGGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp CATGGGGCCCAGCAGCCTGTGCTCGGTCTGGATGACGCAGTAGGCTGCCTGCTGGCGTCATATTCTATGTaGTTCAAATGCTTTTACAAG +
Preference number: 4 (lower is better)
Translates to: HGAQQPVLGLDDAVGCLLASYSM*FKCFYK
Trigger: CTTGTAAAAGCATTTGAAGCACATAGAATATGACGC...CAGCAGGCAGCCTACTGCGTCATCCAGACCGAGCACAGGCTGCTGGGCCCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp AGGATTAGCGGGGCAGGCCGCACCCCAACGATGAGGAGGACACGGAGGGCGATGGCGTCATATTCTATGTaGTTCAAATGCTTTTACAAG +
Preference number: 4 (lower is better)
Translates to: RISGAGRTPTMRRTRRAMASYSM*FKCFYK
Trigger: CTTGTAAAAGCATTTGAAGCACATAGAATATGACGC...CATCGCCCTCCGTGTCCTCCTCATCGTTGGGGTGCGGCCTGCCCCGCTAATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp CATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCATGCGAGCTGTGCAGCTaGTCCAGGACGGCATGTGCG +
Preference number: 4 (lower is better)
Translates to: HTPLPYRHARDYVHTCLSCELCS*SRTACA
Trigger: CGCACATGCCGTCCTGGACCAGCTGCACAGCTCGCA...TGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp ATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGTGCGAGCTGTGCAGCTaGTCCAGGACGGCATGTGCG +
Preference number: 4 (lower is better)
Translates to: IHPFLTDTQEIMYTRAFQCELCS*SRTACA
Trigger: CGCACATGCCGTCCTGGACCAGCTGCACAGCTCGCA...CTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp GCATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCCCTGGAGCTCGAAGGTaGGGTTGTTGCTGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: AYTPSLQTRKRLCTHVPFPGARR*GCCCPP
Trigger: AGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGG...GAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGCCTTGGGGACTTGGTTCCTaGAGCTCGAAGGTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: HPFLTDTQEIMYTRAFQPWGLGS*SSKVGL
Trigger: CAACCCCACCTTCGAGCTCCAGGAACCAAGTCCCCA...AGGCTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp ATGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCAAGGTGGAGATGCTTCTaGCTGAGATGTGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: MQAHTYAHTHMHTPFIPARWRCF*LRCALP
Trigger: GGGGAGGGCACATCTCAGCCAGAAGCATCTCCACCT...TGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp TCCCATAGACAAGCCTGGGGAACCTTCATCCCCCACCAAGTGTTACCTCCTGTTATGCACTGGGTGAGGTaGAGATGCTTCTGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: SHRQAWGTFIPHQVLPPVMHWVR*RCFWLR
Trigger: TCTCAGCCAGAAGCATCTCCACCTCACCCAGTGCAT...AACAGGAGGTAACACTTGGTGGGGGATGAAGGTTCCCCAGGCTTGTCTATGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577903.5
CDS-3UTR CCA 90 bp GACTCCAATGATGTTGAGGAGGAATCCTGCCCGGGCCATATCCAACACTTTGAGCACAGGCTCATGCACTaGGTGAGGTGGAGATGCTTC +
Preference number: 4 (lower is better)
Translates to: DSNDVEEESCPGHIQHFEHRLMH*VRWRCF
Trigger: GAAGCATCTCCACCTCACCCAGTGCATGAGCCTGTG...CTCAAAGTGTTGGATATGGCCCGGGCAGGATTCCTCCTCAACATCATTGGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp CGCAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCAAGAGCGAGTTGATCTaGCCTTGCAGCACCAGGTTG +
Preference number: 4 (lower is better)
Translates to: RKRLCTHVPFSLWPGAWSKSELI*PCSTRL
Trigger: CAACCTGGTGCTGCAAGGCCAGATCAACTCGCTCTT...GCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp TCCCATAGACAAGCCTGGGGAACCTTCATCCCCCACCAAGTGTTACCTCCTGTTACCACGTTGCCGTTTTaGGGGAAGAGCGAGTTGATC +
Preference number: 4 (lower is better)
Translates to: SHRQAWGTFIPHQVLPPVTTLPF*GKSELI
Trigger: GATCAACTCGCTCTTCCCCCAAAACGGCAACGTGGT...AACAGGAGGTAACACTTGGTGGGGGATGAAGGTTCCCCAGGCTTGTCTATGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000577903.5
CDS-3UTR CCA 90 bp ATGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCAGGGTTTTCTGGGTCCTaGGTCAGCCCTGGGAACTTG +
Preference number: 4 (lower is better)
Translates to: MQAHTYAHTHMHTPFIPAGFSGS*VSPGNL
Trigger: CAAGTTCCCAGGGCTGACCCAGGACCCAGAAAACCC...TGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp AAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTGGGCCTTCAGCTTCCCTaGGTTTTCTGGGTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: KRLCTHVPFSLWPGAWSLGLQLP*VFWVLG
Trigger: ACCCAGGACCCAGAAAACCCAGGGAAGCTGAAGGCC...CAAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp GCATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCATCGCTCACTGCCCTTaGCCAGGGCATAGCCACCAC +
Preference number: 4 (lower is better)
Translates to: AYTPSLQTRKRLCTHVPFIAHCP*PGHSHH
Trigger: GTGGTGGCTATGCCCTGGCCAAGGGCAGTGAGCGAT...GAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp GACTCCAATGATGTTGAGGAGGAATCCTGCCCGGGCCATATCCAACACTTTGAGGATGATGGCAATGGCTaGAGCTGGCACACTCTGCAG +
Preference number: 4 (lower is better)
Translates to: DSNDVEEESCPGHIQHFEDDGNG*SWHTLQ
Trigger: CTGCAGAGTGTGCCAGCTCCAGCCATTGCCATCATC...CTCAAAGTGTTGGATATGGCCCGGGCAGGATTCCTCCTCAACATCATTGGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp GCATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGATGGCCTGGGCCATaGAGGCTAGGATGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: AYTPSLQTRKRLCTHVPFRWPGP*RLGWAG
Trigger: TCCTGCCCATCCTAGCCTCCATGGCCCAGGCCATCT...GAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp AAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTGTTGGTGTGGTGGTGTTaGCCAGGCTTGGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: KRLCTHVPFSLWPGAWSLLVWWC*PGLAGT
Trigger: AGTGCCTGCCAAGCCTGGCCAACACCACCACACCAA...CAAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp GCATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCCCTAGGGGCTTGGTGTaGTGGTGTTGGCCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: AYTPSLQTRKRLCTHVPFPRGLV*WCWPGL
Trigger: CAAGCCTGGCCAACACCACCACACCAAGCCCCTAGG...GAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp ATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGCCGGGCTCAGAGGAGTaGGAATGGGGTGGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: IHPFLTDTQEIMYTRAFQPGSEE*EWGGSS
Trigger: GGAAGACCCACCCCATTCCCACTCCTCTGAGCCCGG...CTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTCTTTGGCCTGGAGCTTaGAGCTTGGAGCTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: QEIMYTRAFQPLAWSLELLWPGA*SLELGV
Trigger: CACCCCAAGCTCCAAGCTCCAAGCTCCAGGCCAAAG...AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CACCCAGCAATAACACGATATTCCACGGCATCTTCTGGTTCACCGTCTTCCAGTCTTTGGCCTGGAGCTTaGAGCTTGGAGCTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: HPAITRYSTASSGSPSSSLWPGA*SLELGV
Trigger: CACCCCAAGCTCCAAGCTCCAAGCTCCAGGCCAAAG...ACTGGAAGACGGTGAACCAGAAGATGCCGTGGAATATCGTGTTATTGCTGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CAAGACCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGTTTCAGCCTTTGGCCTaGAGCTTGGAGCTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: QDLGHQRGHVVLSVNTHVFQPLA*SLELGA
Trigger: AGCTCCAAGCTCCAAGCTCCAGGCCAAAGGCTGAAA...CACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGGTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTGGGGCACCAGAGAGGAGCCAAGCAGGCAGGTaGCAGGCTTATATAAAGCCA +
Preference number: 4 (lower is better)
Translates to: QVSLVTKLGIPRPGAPERSQAGR*QAYIKP
Trigger: TGGCTTTATATAAGCCTGCCACCTGCCTGCTTGGCT...CCTCTCTGGTGCCCCAGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444914.7
CDS-3UTR CCA 90 bp AAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTGTACTCGACGGCAACCTaGCAGGTGGAGACATGGCTG +
Preference number: 4 (lower is better)
Translates to: KRLCTHVPFSLWPGAWSLYSTAT*QVETWL
Trigger: CAGCCATGTCTCCACCTGCCAGGTTGCCGTCGAGTA...CAAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444914.7
3UTR CAA 72 bp TTGATGGCCAGTGCGATGATCAGGACTCCAATGATGTaGAGGAGGAATCCTGCCCGGGCCATATCCAACACT +
Preference number: 4 (lower is better)
Translates to: LMASAMIRTPMM*RRNPARAISNT
Trigger: AGTGTTGGATATGGCCCGGGCAGGATTCCTCCTCAACATCATTGGAGTCCTGATCATCGCACTGGCCATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR TCA 90 bp CATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGGCTCATGCACTGGGTaGGGTGGAGATGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: HTPLPYRHARDYVHTCLSGSCTG*GGDASG
Trigger: GCCAGAAGCATCTCCACCTCACCCAGTGCATGAGCC...TGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR TCA 90 bp ATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGGTTTCCCAGCCACTCTaGCAGGCCCGATCGCTCACT +
Preference number: 4 (lower is better)
Translates to: IHPFLTDTQEIMYTRAFQVSQPL*QARSLT
Trigger: AGTGAGCGATCGGGCCTGTCAGAGTGGCTGGGAAAC...CTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR TCA 90 bp TGTCCCATCGGACACCATGCTCTCCCCCTTGGCATTGGGAAAAGCCAAATTGCCCCATATCCAACACTTTaGGGTCCCCGAAAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: CPIGHHALPLGIGKSQIAPYPTL*GPRKRR
Trigger: TCTTCTCTTTCGGGGACCTCAAAGTGTTGGATATGG...GGCAATTTGGCTTTTCCCAATGCCAAGGGGGAGAGCATGGTGTCCGATGGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR TCA 90 bp CAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTGGGGCACCAGAGAGGCAGCACATAGGAAACTaGGCATACACCCCTTCCTTA +
Preference number: 4 (lower is better)
Translates to: QVSLVTKLGIPRPGAPERQHIGN*AYTPSL
Trigger: TAAGGAAGGGGTGTATGCTCAGTTTCCTATGTGCTG...CCTCTCTGGTGCCCCAGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR TCA 90 bp TGCCCATTATCAAGCTTGGTCACCTCCTTCTGGGGACTTGGTTCCTGGAGCTCGCAGCACATAGGAAACTaGGCATACACCCCTTCCTTA +
Preference number: 4 (lower is better)
Translates to: CPLSSLVTSFWGLGSWSSQHIGN*AYTPSL
Trigger: TAAGGAAGGGGTGTATGCTCAGTTTCCTATGTGCTG...CGAGCTCCAGGAACCAAGTCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR TCA 90 bp CAGTGCGATGATCAGGACTCCAATGATGTTGAGGAGGAATCCTGCCCGGGCCATAGTAGGCCTCTCTGCTaGTTCAGGAAGAAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: QCDDQDSNDVEEESCPGHSRPLC*FRKKFL
Trigger: CAGAAACTTCTTCCTGAATCAGCAGAGAGGCCTACT...ATGGCCCGGGCAGGATTCCTCCTCAACATCATTGGAGTCCTGATCATCGCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp CAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTGGACACGGAGGGCGATaGGTTTATGCAGGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: QEIMYTRAFQPLAWSLELGHGGR*VYAGSS
Trigger: ACTGGAACCTGCATAAACGCATCGCCCTCCGTGTCC...AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGTCCAGGACGGCATGTaGGATGGGCACCATCATGGC +
Preference number: 4 (lower is better)
Translates to: HTPLPYRHARDYVHTCLSVQDGM*DGHHHG
Trigger: GCCATGATGGTGCCCATCGCACATGCCGTCCTGGAC...TGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp ATGATGAACATAATTATGCCGATGAAGATGGCCACTGTCCCATCGGACACCATGCCTCCTCGACGTTGCTaGTGGCTTGCGAGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: MMNIIMPMKMATVPSDTMPPRRC*WLASCA
Trigger: TGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGG...CATGGTGTCCGATGGGACAGTGGCCATCTTCATCGGCATAATTATGTTCATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp ATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGTGCCCTCCTCGACGTTaGTGCTGGCTTGCGAGCTGT +
Preference number: 4 (lower is better)
Translates to: IHPFLTDTQEIMYTRAFQCPPRR*CWLASC
Trigger: ACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCA...CTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCACGAAGGTGGGGTTGTTaGTGCCCTCCTCGACGTTGC +
Preference number: 4 (lower is better)
Translates to: HTPLPYRHARDYVHTCLSRRWGC*CPPRRC
Trigger: GCAACGTCGAGGAGGGCAGCAACAACCCCACCTTCG...TGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp TCAATAAATACAGTGCAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTGGGCCCAGCAGCCTGTaGTCGGTCTGGATGACGCAG +
Preference number: 4 (lower is better)
Translates to: SINTVQVSLVTKLGIPRPGPSSL*SVWMTQ
Trigger: CTGCGTCATCCAGACCGAGCACAGGCTGCTGGGCCC...AGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTGCACTGTATTTATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGCCTGCTGATGGCCTTTTCTaGAAAGGTCATGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: HPFLTDTQEIMYTRAFQPADGLF*KGHGAQ
Trigger: CTGGGCCCCATGACCTTTGCAGAAAAGGCCATCAGC...AGGCTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTGTTGAGGAGGAATCCTaGCCGGGCCATATCCAACAC +
Preference number: 4 (lower is better)
Translates to: QEIMYTRAFQPLAWSLELVEEES*PGHIQH
Trigger: GTGTTGGATATGGCCCGGGCAGGATTCCTCCTCAAC...AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp TCCCATAGACAAGCCTGGGGAACCTTCATCCCCCACCAAGTGTTACCTCCTGTTGCTGTTGATGGCCAGTaGGATGATCAGGACTCCAAT +
Preference number: 4 (lower is better)
Translates to: SHRQAWGTFIPHQVLPPVAVDGQ*DDQDSN
Trigger: ATTGGAGTCCTGATCATCGCACTGGCCATCAACAGC...AACAGGAGGTAACACTTGGTGGGGGATGAAGGTTCCCCAGGCTTGTCTATGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577903.5
CDS-3UTR GCA 90 bp CCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGTGCACGATTATGTACACACGTaGCTTTCAGCCTTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: PGAPERACCIVCEHTRVHDYVHT*LSAFGL
Trigger: CAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATC...GTGCACACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CAGTGCGATGATCAGGACTCCAATGATGTTGAGGAGGAATCCTGCCCGGGCCATGATTATGTACACACGTaGCTTTCAGCCTTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: QCDDQDSNDVEEESCPGHDYVHT*LSAFGL
Trigger: CAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATC...ATGGCCCGGGCAGGATTCCTCCTCAACATCATTGGAGTCCTGATCATCGCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp ATTATGCCGATGAAGATGGCCACTGTCCCATCGGACACCATGCTCTCCCCCTTGGATTATGTACACACGTaGCTTTCAGCCTTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: IMPMKMATVPSDTMLSPLDYVHT*LSAFGL
Trigger: CAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATC...CAAGGGGGAGAGCATGGTGTCCGATGGGACAGTGGCCATCTTCATCGGCATAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CTTGGAGGGTATGATGAACATAATTATGCCGATGAAGATGGCCACTGTCCCATCGGACGGCATGTGCGATaGGCACCATCATGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LGGYDEHNYADEDGHCPIGRHVR*APSWLR
Trigger: CCTCAGCCATGATGGTGCCCATCGCACATGCCGTCC...GATGGGACAGTGGCCATCTTCATCGGCATAATTATGTTCATCATACCCTCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp CACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGCCTCACAGGCTCATGCACTaGGTGAGGTGGAGATGCTTC +
Preference number: 4 (lower is better)
Translates to: HPFLTDTQEIMYTRAFQPHRLMH*VRWRCF
Trigger: GAAGCATCTCCACCTCACCCAGTGCATGAGCCTGTG...AGGCTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTCACAGGCTCATGCACTaGGTGAGGTGGAGATGCTTC +
Preference number: 4 (lower is better)
Translates to: QEIMYTRAFQPLAWSLELHRLMH*VRWRCF
Trigger: GAAGCATCTCCACCTCACCCAGTGCATGAGCCTGTG...AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CCAGGGCATAGCCACCACCCAGCAATAACACGATATTCCACGGCATCTTCTGGTCCATGCTCTCCCCCTTaGCATTGGGAAAAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: PGHSHHPAITRYSTASSGPCSPP*HWEKPN
Trigger: ATTTGGCTTTTCCCAATGCCAAGGGGGAGAGCATGG...ACCAGAAGATGCCGTGGAATATCGTGTTATTGCTGGGTGGTGGCTATGCCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACATAGGAGGGTTTTCTGGGTCCTaGGTCAGCCCTGGGAACTTG +
Preference number: 4 (lower is better)
Translates to: RTHMRTHTCTHLLFQHIGGFSGS*VSPGNL
Trigger: CAAGTTCCCAGGGCTGACCCAGGACCCAGAAAACCC...TCCTATGTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CTTGGAGGGTATGATGAACATAATTATGCCGATGAAGATGGCCACTGTCCCATCGGCAATGGCTGGAGCTaGCACACTCTGCAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: LGGYDEHNYADEDGHCPIGNGWS*HTLQWG
Trigger: ACCCCACTGCAGAGTGTGCCAGCTCCAGCCATTGCC...GATGGGACAGTGGCCATCTTCATCGGCATAATTATGTTCATCATACCCTCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp ATGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCAGATGATGGCAATGGCTaGAGCTGGCACACTCTGCAG +
Preference number: 4 (lower is better)
Translates to: MQAHTYAHTHMHTPFIPADDGNG*SWHTLQ
Trigger: CTGCAGAGTGTGCCAGCTCCAGCCATTGCCATCATC...TGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAAGATGGCCTGGGCCATaGAGGCTAGGATGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: HTPLPYRHARDYVHTCLSRWPGP*RLGWAG
Trigger: TCCTGCCCATCCTAGCCTCCATGGCCCAGGCCATCT...TGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACATAGGACGAAAGAGAAGACGATaGCATTGGGCGGGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: RTHMRTHTCTHLLFQHIGRKRRR*HWAGWP
Trigger: TGGCCACCCCGCCCAATGCCATCGTCTTCTCTTTCG...TCCTATGTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CAGCCCTGGGAACTTGGAGGGTATGATGAACATAATTATGCCGATGAAGATGGCCGAAAGAGAAGACGATaGCATTGGGCGGGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: QPWELGGYDEHNYADEDGRKRRR*HWAGWP
Trigger: TGGCCACCCCGCCCAATGCCATCGTCTTCTCTTTCG...GCCATCTTCATCGGCATAATTATGTTCATCATACCCTCCAAGTTCCCAGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp GCATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGGCTTGGCAGGCACTaGGCTGTGGTGTTGGACTGT +
Preference number: 4 (lower is better)
Translates to: AYTPSLQTRKRLCTHVPFRLGRH*AVVLDC
Trigger: ACAGTCCAACACCACAGCCCAGTGCCTGCCAAGCCT...GAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACATAGGATTGGTGTGGTGGTGTTaGCCAGGCTTGGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: RTHMRTHTCTHLLFQHIGLVWWC*PGLAGT
Trigger: AGTGCCTGCCAAGCCTGGCCAACACCACCACACCAA...TCCTATGTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCACTGGAGCTTGGAGCTTaGAGCTTGGGGTGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: HTPLPYRHARDYVHTCLSLELGA*SLGCPL
Trigger: GAGGGGACACCCCAAGCTCCAAGCTCCAAGCTCCAG...TGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp ATGATGAACATAATTATGCCGATGAAGATGGCCACTGTCCCATCGGACACCATGCTGGAGCTTGGAGCTTaGAGCTTGGGGTGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: MMNIIMPMKMATVPSDTMLELGA*SLGCPL
Trigger: GAGGGGACACCCCAAGCTCCAAGCTCCAAGCTCCAG...CATGGTGTCCGATGGGACAGTGGCCATCTTCATCGGCATAATTATGTTCATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp TGCCCATTATCAAGCTTGGTCACCTCCTTCTGGGGACTTGGTTCCTGGAGCTCGCTGGGCTCTCGAAACTaGATGGAAATGGTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: CPLSSLVTSFWGLGSWSSLGSRN*MEMVSE
Trigger: TTCAGAGACCATTTCCATCCAGTTTCGAGAGCCCAG...CGAGCTCCAGGAACCAAGTCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459818.2
CDS-3UTR CCA 90 bp AAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTGAGACTGGCATTCCCCTaGGCTCTCGAAACTGGATGG +
Preference number: 4 (lower is better)
Translates to: KRLCTHVPFSLWPGAWSLRLAFP*ALETGW
Trigger: CCATCCAGTTTCGAGAGCCCAGGGGAATGCCAGTCT...CAAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444914.7
ENST00000459818.2
CDS-3UTR TCA 90 bp CCAGGGCATAGCCACCACCCAGCAATAACACGATATTCCACGGCATCTTCTGGTCAGCACATAGGAAACTaGGCATACACCCCTTCCTTA +
Preference number: 4 (lower is better)
Translates to: PGHSHHPAITRYSTASSGQHIGN*AYTPSL
Trigger: TAAGGAAGGGGTGTATGCTCAGTTTCCTATGTGCTG...ACCAGAAGATGCCGTGGAATATCGTGTTATTGCTGGGTGGTGGCTATGCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR TCA 90 bp CTTGGAGGGTATGATGAACATAATTATGCCGATGAAGATGGCCACTGTCCCATCGGAGGGTGGTGGAGATaGGCCTCTCCCATAGACAAG +
Preference number: 4 (lower is better)
Translates to: LGGYDEHNYADEDGHCPIGGWWR*ASPIDK
Trigger: CTTGTCTATGGGAGAGGCTCATCTCCACCACCCTCC...GATGGGACAGTGGCCATCTTCATCGGCATAATTATGTTCATCATACCCTCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577903.5
CDS-3UTR GCA 90 bp CGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACATAGGATGGGTGAGGTGGAGATaGTTCTGGCTGAGATGTGCC +
Preference number: 4 (lower is better)
Translates to: RTHMRTHTCTHLLFQHIGWVRWR*FWLRCA
Trigger: GGCACATCTCAGCCAGAAGCATCTCCACCTCACCCA...TCCTATGTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGTGCACGCATCTTTTCCCCAATaGCAAAGTTCTTCCGGAAGT +
Preference number: 4 (lower is better)
Translates to: PGAPERACCIVCEHTRVHASFPQ*QSSSGS
Trigger: ACTTCCGGAAGAACTTTGGCATTGGGGAAAAGATGC...GTGCACACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCATCCCATCGGACACCATaGTCTCCCCCTTGGCATTGG +
Preference number: 4 (lower is better)
Translates to: HTPLPYRHARDYVHTCLSSHRTP*SPPWHW
Trigger: CCAATGCCAAGGGGGAGAGCATGGTGTCCGATGGGA...TGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CAGCCCTGGGAACTTGGAGGGTATGATGAACATAATTATGCCGATGAAGATGGCGGAGCTGGCACACTCTaGAGTGGGGTCAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: QPWELGGYDEHNYADEDGGAGTL*SGVSLF
Trigger: AAACAAGCTGACCCCACTGCAGAGTGTGCCAGCTCC...GCCATCTTCATCGGCATAATTATGTTCATCATACCCTCCAAGTTCCCAGGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp CGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACATAGGAGTTGAGGAGGAATCCTaGCCGGGCCATATCCAACAC +
Preference number: 4 (lower is better)
Translates to: RTHMRTHTCTHLLFQHIGVEEES*PGHIQH
Trigger: GTGTTGGATATGGCCCGGGCAGGATTCCTCCTCAAC...TCCTATGTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CAGCCCTGGGAACTTGGAGGGTATGATGAACATAATTATGCCGATGAAGATGGCGTTGAGGAGGAATCCTaGCCGGGCCATATCCAACAC +
Preference number: 4 (lower is better)
Translates to: QPWELGGYDEHNYADEDGVEEES*PGHIQH
Trigger: GTGTTGGATATGGCCCGGGCAGGATTCCTCCTCAAC...GCCATCTTCATCGGCATAATTATGTTCATCATACCCTCCAAGTTCCCAGGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp CCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGTGCACGTGAACACACACGTGTaGACTGTCCAACATACATAC +
Preference number: 4 (lower is better)
Translates to: PGAPERACCIVCEHTRVHVNTHV*TVQHTY
Trigger: GTATGTATGTTGGACAGTGCACACGTGTGTGTTCAC...GTGCACACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGCCTGAGGCAGCAGGAGAATaGGCACGAAGAACACGATCA +
Preference number: 4 (lower is better)
Translates to: HPFLTDTQEIMYTRAFQPEAAGE*ARRTRS
Trigger: TGATCGTGTTCTTCGTGCCCATTCTCCTGCTGCCTC...AGGCTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTGAGGCAGCAGGAGAATaGGCACGAAGAACACGATCA +
Preference number: 4 (lower is better)
Translates to: QEIMYTRAFQPLAWSLELEAAGE*ARRTRS
Trigger: TGATCGTGTTCTTCGTGCCCATTCTCCTGCTGCCTC...AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp GAGGGTATGATGAACATAATTATGCCGATGAAGATGGCCACTGTCCCATCGGACCTCCTTCTGGGGACTTaGTTCCTGGAGCTCGAAGGT +
Preference number: 4 (lower is better)
Translates to: EGMMNIIMPMKMATVPSDLLLGT*FLELEG
Trigger: ACCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGGAG...GTCCGATGGGACAGTGGCCATCTTCATCGGCATAATTATGTTCATCATACCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp GCATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCTTGGTCACCTCCTTCTaGGGACTTGGTTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: AYTPSLQTRKRLCTHVPFLVTSF*GLGSWS
Trigger: GCTCCAGGAACCAAGTCCCCAGAAGGAGGTGACCAA...GAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp ATGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCAAAGAGCGAGTTGATCTaGCCTTGCAGCACCAGGTTG +
Preference number: 4 (lower is better)
Translates to: MQAHTYAHTHMHTPFIPAKSELI*PCSTRL
Trigger: CAACCTGGTGCTGCAAGGCCAGATCAACTCGCTCTT...TGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp AAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTGAAGAGCGAGTTGATCTaGCCTTGCAGCACCAGGTTG +
Preference number: 4 (lower is better)
Translates to: KRLCTHVPFSLWPGAWSLKSELI*PCSTRL
Trigger: CAACCTGGTGCTGCAAGGCCAGATCAACTCGCTCTT...CAAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGCCTACCACGTTGCCGTTTTaGGGGAAGAGCGAGTTGATC +
Preference number: 4 (lower is better)
Translates to: HPFLTDTQEIMYTRAFQPTTLPF*GKSELI
Trigger: GATCAACTCGCTCTTCCCCCAAAACGGCAACGTGGT...AGGCTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp TGCATCTTTTCCCCAATGCCAAAGTTCTTCCGGAAGTTGAAGCCCAGGAAGAGGACCACGTTGCCGTTTTaGGGGAAGAGCGAGTTGATC +
Preference number: 4 (lower is better)
Translates to: CIFSPMPKFFRKLKPRKRTTLPF*GKSELI
Trigger: GATCAACTCGCTCTTCCCCCAAAACGGCAACGTGGT...CCTCTTCCTGGGCTTCAACTTCCGGAAGAACTTTGGCATTGGGGAAAAGATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp CGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACATAGGATTTCTGCAAAGGTCATaGGGCCCAGCAGCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: RTHMRTHTCTHLLFQHIGFLQRS*GPAACA
Trigger: AGCACAGGCTGCTGGGCCCCATGACCTTTGCAGAAA...TCCTATGTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTTCTCCCCCTTGGCATTaGGAAAAGCCAAATTGCCCC +
Preference number: 4 (lower is better)
Translates to: QEIMYTRAFQPLAWSLELSPPWH*EKPNCP
Trigger: GGGGCAATTTGGCTTTTCCCAATGCCAAGGGGGAGA...AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp TGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACCCATGCTCTCCCCCTTaGCATTGGGAAAAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: CRRTHMRTHTCTHLLFQHPCSPP*HWEKPN
Trigger: ATTTGGCTTTTCCCAATGCCAAGGGGGAGAGCATGG...GTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp ATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGGGCCTTCAGCTTCCCTaGGTTTTCTGGGTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: IHPFLTDTQEIMYTRAFQGLQLP*VFWVLG
Trigger: ACCCAGGACCCAGAAAACCCAGGGAAGCTGAAGGCC...CTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGGCCTTCAGCTTCCCTaGGTTTTCTGGGTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: HTPLPYRHARDYVHTCLSGLQLP*VFWVLG
Trigger: ACCCAGGACCCAGAAAACCCAGGGAAGCTGAAGGCC...TGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp TCAATAAATACAGTGCAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTTTGGAGCTTGGAGCTTaGGGTGTCCCCTCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: SINTVQVSLVTKLGIPRPLELGA*GVPSGL
Trigger: GAGCCCGGAGGGGACACCCCAAGCTCCAAGCTCCAA...AGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTGCACTGTATTTATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp ATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGCTTTGGCCTGGAGCTTaGAGCTTGGAGCTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: IHPFLTDTQEIMYTRAFQLWPGA*SLELGV
Trigger: CACCCCAAGCTCCAAGCTCCAAGCTCCAGGCCAAAG...CTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGCCTTTTCAGCCTTTGGCCTaGAGCTTGGAGCTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: HPFLTDTQEIMYTRAFQPFQPLA*SLELGA
Trigger: AGCTCCAAGCTCCAAGCTCCAGGCCAAAGGCTGAAA...AGGCTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp GCATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCGTCTGGTCACTAAGCTaGGGATACCAAGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: AYTPSLQTRKRLCTHVPFVWSLS*GYQDLG
Trigger: CCCCAGGTCTTGGTATCCCCAGCTTAGTGACCAGAC...GAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp ATGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCAAACTCCTTCTGTTCTTaGAGGCTGCTGAGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: MQAHTYAHTHMHTPFIPANSFCS*RLLRVV
Trigger: CACCACCCTCAGCAGCCTCCAAGAACAGAAGGAGTT...TGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444914.7
CDS-3UTR CCA 90 bp GCATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGACTGGCATTCCCCTaGGCTCTCGAAACTGGATGG +
Preference number: 4 (lower is better)
Translates to: AYTPSLQTRKRLCTHVPFRLAFP*ALETGW
Trigger: CCATCCAGTTTCGAGAGCCCAGGGGAATGCCAGTCT...GAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444914.7
ENST00000459818.2
CDS-3UTR CCA 90 bp CACCCAGCAATAACACGATATTCCACGGCATCTTCTGGTTCACCGTCTTCCAGTCATTTCACAGCTTACTaGGGACGAGGATGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: HPAITRYSTASSGSPSSSHFTAY*GRGWAE
Trigger: CTCTGCCCATCCTCGTCCCCAGTAAGCTGTGAAATG...ACTGGAAGACGGTGAACCAGAAGATGCCGTGGAATATCGTGTTATTGCTGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp CTTGGAGGGTATGATGAACATAATTATGCCGATGAAGATGGCCACTGTCCCATCCCTCCTGTTCTGCAATaGGGGCCCTATACCCTTCCC +
Preference number: 4 (lower is better)
Translates to: LGGYDEHNYADEDGHCPIPPVLQ*GPYTLP
Trigger: GGGAAGGGTATAGGGCCCCCATTGCAGAACAGGAGG...GATGGGACAGTGGCCATCTTCATCGGCATAATTATGTTCATCATACCCTCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577903.5
3UTR CAA 72 bp CCTGGGTTTTCTGGGTCCTGGGTCAGCCCTGGGAACTaGGAGGGTATGATGAACATAATTATGCCGATGAAG +
Preference number: 4 (lower is better)
Translates to: PGFSGSWVSPGN*EGMMNIIMPMK
Trigger: CTTCATCGGCATAATTATGTTCATCATACCCTCCAAGTTCCCAGGGCTGACCCAGGACCCAGAAAACCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR TCA 90 bp TCAATAAATACAGTGCAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTGGGGGAAGAGCGAGTTaGTCTGGCCTTGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: SINTVQVSLVTKLGIPRPGGRAS*SGLAAP
Trigger: TGGTGCTGCAAGGCCAGATCAACTCGCTCTTCCCCC...AGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTGCACTGTATTTATTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR TCA 90 bp TCAATAAATACAGTGCAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTTGTGCTCGGTCTGGATaGCGCAGTAGGCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: SINTVQVSLVTKLGIPRPCARSG*RSRLPA
Trigger: AGCAGGCAGCCTACTGCGTCATCCAGACCGAGCACA...AGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTGCACTGTATTTATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR TCA 90 bp TTTAATGTGACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCAGGCCACTCCAAGCCTaGATTTCAATAAATACAGTG +
Preference number: 4 (lower is better)
Translates to: FNVTLTAQRLFPWQLLAGRPLQA*ISINTV
Trigger: CACTGTATTTATTGAAATTCAGGCTTGGAGTGGCCT...GCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTCACATTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS-3UTR TCA 90 bp GCCCATTATCAAGCTTGGTCACCTCCTTCTGGGGACTTGGTTCCTGGAGCTCGAAGGCCACTCCAAGCCTaGATTTCAATAAATACAGTG +
Preference number: 4 (lower is better)
Translates to: AHYQAWSPPSGDLVPGARRPLQA*ISINTV
Trigger: CACTGTATTTATTGAAATTCAGGCTTGGAGTGGCCT...TCGAGCTCCAGGAACCAAGTCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459818.2
CDS-3UTR GCA 90 bp TCAATAAATACAGTGCAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTTGGAGCAGCAAGGGCTaGTACAGCCACTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SINTVQVSLVTKLGIPRPWSSKG*YSHCLQ
Trigger: CTGGAGGCAGTGGCTGTAGCAGCCCTTGCTGCTCCA...AGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTGCACTGTATTTATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314669.10
ENST00000444914.7
CDS-3UTR GCA 90 bp ATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGGTGACAGGGAGGGCCTaGCCATTATCAAGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: IHPFLTDTQEIMYTRAFQVTGRA*PLSSLV
Trigger: GACCAAGCTTGATAATGGGCAGGCCCTCCCTGTCAC...CTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp GAGGGTATGATGAACATAATTATGCCGATGAAGATGGCCACTGTCCCATCGGACGCCTGCTGTTGCTCCTaGATCTTTTCCCCAATGCCA +
Preference number: 4 (lower is better)
Translates to: EGMMNIIMPMKMATVPSDACCCS*IFSPMP
Trigger: TGGCATTGGGGAAAAGATGCAGGAGCAACAGCAGGC...GTCCGATGGGACAGTGGCCATCTTCATCGGCATAATTATGTTCATCATACCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp CATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGTTGAGGAGGAATCCTaGCCGGGCCATATCCAACAC +
Preference number: 4 (lower is better)
Translates to: HTPLPYRHARDYVHTCLSVEEES*PGHIQH
Trigger: GTGTTGGATATGGCCCGGGCAGGATTCCTCCTCAAC...TGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp AAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTGGCTGTTGATGGCCAGTaGGATGATCAGGACTCCAAT +
Preference number: 4 (lower is better)
Translates to: KRLCTHVPFSLWPGAWSLAVDGQ*DDQDSN
Trigger: ATTGGAGTCCTGATCATCGCACTGGCCATCAACAGC...CAAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp TCAATAAATACAGTGCAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTGGACGGCATGTGCGATaGGCACCATCATGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SINTVQVSLVTKLGIPRPGRHVR*APSWLR
Trigger: CCTCAGCCATGATGGTGCCCATCGCACATGCCGTCC...AGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTGCACTGTATTTATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCACTCCTTCTGGGGACTTaGTTCCTGGAGCTCGAAGGT +
Preference number: 4 (lower is better)
Translates to: HTPLPYRHARDYVHTCLSLLLGT*FLELEG
Trigger: ACCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGGAG...TGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp GCATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCGCCCATTATCAAGCTTaGTCACCTCCTTCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: AYTPSLQTRKRLCTHVPFAHYQA*SPPSGD
Trigger: GTCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGC...GAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACATAGGAATGCACTGGGTGAGGTaGAGATGCTTCTGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: RTHMRTHTCTHLLFQHIGMHWVR*RCFWLR
Trigger: TCTCAGCCAGAAGCATCTCCACCTCACCCAGTGCAT...TCCTATGTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACATAGGATCTCCCCCTTGGCATTaGGAAAAGCCAAATTGCCCC +
Preference number: 4 (lower is better)
Translates to: RTHMRTHTCTHLLFQHIGSPPWH*EKPNCP
Trigger: GGGGCAATTTGGCTTTTCCCAATGCCAAGGGGGAGA...TCCTATGTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp TCAATAAATACAGTGCAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTATCGCTCACTGCCCTTaGCCAGGGCATAGCCACCAC +
Preference number: 4 (lower is better)
Translates to: SINTVQVSLVTKLGIPRPIAHCP*PGHSHH
Trigger: GTGGTGGCTATGCCCTGGCCAAGGGCAGTGAGCGAT...AGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTGCACTGTATTTATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGATGATGGCAATGGCTaGAGCTGGCACACTCTGCAG +
Preference number: 4 (lower is better)
Translates to: HTPLPYRHARDYVHTCLSDDGNG*SWHTLQ
Trigger: CTGCAGAGTGTGCCAGCTCCAGCCATTGCCATCATC...TGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp TCAATAAATACAGTGCAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTAGATGGCCTGGGCCATaGAGGCTAGGATGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SINTVQVSLVTKLGIPRPRWPGP*RLGWAG
Trigger: TCCTGCCCATCCTAGCCTCCATGGCCCAGGCCATCT...AGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTGCACTGTATTTATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp TCAATAAATACAGTGCAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTCCTAGGGGCTTGGTGTaGTGGTGTTGGCCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: SINTVQVSLVTKLGIPRPPRGLV*WCWPGL
Trigger: CAAGCCTGGCCAACACCACCACACCAAGCCCCTAGG...AGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTGCACTGTATTTATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp TGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACCTGGGCTCTCGAAACTaGATGGAAATGGTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: CRRTHMRTHTCTHLLFQHLGSRN*MEMVSE
Trigger: TTCAGAGACCATTTCCATCCAGTTTCGAGAGCCCAG...GTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444914.7
ENST00000459818.2
CDS-3UTR TCA 90 bp ATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGATGGGATGCAGTCACTaGCATTCCCACAGACTGGCA +
Preference number: 4 (lower is better)
Translates to: IHPFLTDTQEIMYTRAFQMGCSH*HSHRLA
Trigger: TGCCAGTCTGTGGGAATGTCAGTGACTGCATCCCAT...CTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444914.7
CDS-3UTR GCA 90 bp TTGTGCCAGGCGTCATATTCTATGTGCTTCAAATGCTTTTACAAGTTGCATTTACCAGGTTGGGTGCGGTaGCAGTCAGCGTGGCGATGC +
Preference number: 4 (lower is better)
Translates to: LCQASYSMCFKCFYKLHLPGWVR*QSAWRC
Trigger: GCATCGCCACGCTGACTGGCACCGCACCCAACCTGG...TAAATGCAACTTGTAAAAGCATTTGAAGCACATAGAATATGACGCCTGGCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp ATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGGCCTGCTGTTGCTCCTaGATCTTTTCCCCAATGCCA +
Preference number: 4 (lower is better)
Translates to: IHPFLTDTQEIMYTRAFQACCCS*IFSPMP
Trigger: TGGCATTGGGGAAAAGATGCAGGAGCAACAGCAGGC...CTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp TTGTGCCAGGCGTCATATTCTATGTGCTTCAAATGCTTTTACAAGTTGCATTTAGGCCCGATCGCTCACTaGCCTTGGCCAGGGCATAGC +
Preference number: 4 (lower is better)
Translates to: LCQASYSMCFKCFYKLHLGPIAH*PWPGHS
Trigger: GCTATGCCCTGGCCAAGGGCAGTGAGCGATCGGGCC...TAAATGCAACTTGTAAAAGCATTTGAAGCACATAGAATATGACGCCTGGCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp CATAGCCACCACCCAGCAATAACACGATATTCCACGGCATCTTCTGGTTCACCGGTGAACACACACGTGTaGACTGTCCAACATACATAC +
Preference number: 4 (lower is better)
Translates to: HSHHPAITRYSTASSGSPVNTHV*TVQHTY
Trigger: GTATGTATGTTGGACAGTGCACACGTGTGTGTTCAC...CGGTGAACCAGAAGATGCCGTGGAATATCGTGTTATTGCTGGGTGGTGGCTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp TCAATAAATACAGTGCAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTTGGGGACTTGGTTCCTaGAGCTCGAAGGTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: SINTVQVSLVTKLGIPRPWGLGS*SSKVGL
Trigger: CAACCCCACCTTCGAGCTCCAGGAACCAAGTCCCCA...AGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTGCACTGTATTTATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp ATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGGCCCATTATCAAGCTTaGTCACCTCCTTCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: IHPFLTDTQEIMYTRAFQAHYQA*SPPSGD
Trigger: GTCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGC...CTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAATGCACTGGGTGAGGTaGAGATGCTTCTGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: HTPLPYRHARDYVHTCLSMHWVR*RCFWLR
Trigger: TCTCAGCCAGAAGCATCTCCACCTCACCCAGTGCAT...TGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp ATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGACCACGTTGCCGTTTTaGGGGAAGAGCGAGTTGATC +
Preference number: 4 (lower is better)
Translates to: IHPFLTDTQEIMYTRAFQTTLPF*GKSELI
Trigger: GATCAACTCGCTCTTCCCCCAAAACGGCAACGTGGT...CTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACATAGGACCATGCTCTCCCCCTTaGCATTGGGAAAAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: RTHMRTHTCTHLLFQHIGPCSPP*HWEKPN
Trigger: ATTTGGCTTTTCCCAATGCCAAGGGGGAGAGCATGG...TCCTATGTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCATTCCACGGCATCTTCTaGTTCACCGTCTTCCAGTCG +
Preference number: 4 (lower is better)
Translates to: HTPLPYRHARDYVHTCLSFHGIF*FTVFQS
Trigger: CGACTGGAAGACGGTGAACCAGAAGATGCCGTGGAA...TGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp TCAATAAATACAGTGCAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTGACATTCCCACAGACTaGCATTCCCCTGGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: SINTVQVSLVTKLGIPRPDIPTD*HSPGLS
Trigger: CGAGAGCCCAGGGGAATGCCAGTCTGTGGGAATGTC...AGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTGCACTGTATTTATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444914.7
CDS-3UTR CCA 90 bp CATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGTGCCCCCGAGGTTATaGGATGCAGTCACTGACATT +
Preference number: 4 (lower is better)
Translates to: HTPLPYRHARDYVHTCLSVPPRL*DAVTDI
Trigger: AATGTCAGTGACTGCATCCCATAACCTCGGGGGCAC...TGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444914.7
CDS-3UTR CCA 90 bp CATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCACATTTCACAGCTTACTaGGGACGAGGATGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: HTPLPYRHARDYVHTCLSHFTAY*GRGWAE
Trigger: CTCTGCCCATCCTCGTCCCCAGTAAGCTGTGAAATG...TGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR TCA 90 bp GCATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCCCATATCCAACACTTTaGGGTCCCCGAAAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: AYTPSLQTRKRLCTHVPFPYPTL*GPRKRR
Trigger: TCTTCTCTTTCGGGGACCTCAAAGTGTTGGATATGG...GAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTGCATCTTTTCCCCAATaGCAAAGTTCTTCCGGAAGT +
Preference number: 4 (lower is better)
Translates to: QEIMYTRAFQPLAWSLELASFPQ*QSSSGS
Trigger: ACTTCCGGAAGAACTTTGGCATTGGGGAAAAGATGC...AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp TCAATAAATACAGTGCAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTGGAGCTGGCACACTCTaGAGTGGGGTCAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: SINTVQVSLVTKLGIPRPGAGTL*SGVSLF
Trigger: AAACAAGCTGACCCCACTGCAGAGTGTGCCAGCTCC...AGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTGCACTGTATTTATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGCTGTTGATGGCCAGTaGGATGATCAGGACTCCAAT +
Preference number: 4 (lower is better)
Translates to: HTPLPYRHARDYVHTCLSAVDGQ*DDQDSN
Trigger: ATTGGAGTCCTGATCATCGCACTGGCCATCAACAGC...TGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp CACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGCCTGTGAACACACACGTGTaGACTGTCCAACATACATAC +
Preference number: 4 (lower is better)
Translates to: HPFLTDTQEIMYTRAFQPVNTHV*TVQHTY
Trigger: GTATGTATGTTGGACAGTGCACACGTGTGTGTTCAC...AGGCTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp TCAATAAATACAGTGCAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTTTGGTCACCTCCTTCTaGGGACTTGGTTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SINTVQVSLVTKLGIPRPLVTSF*GLGSWS
Trigger: GCTCCAGGAACCAAGTCCCCAGAAGGAGGTGACCAA...AGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTGCACTGTATTTATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp CATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCACCATGCTCTCCCCCTTaGCATTGGGAAAAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: HTPLPYRHARDYVHTCLSPCSPP*HWEKPN
Trigger: ATTTGGCTTTTCCCAATGCCAAGGGGGAGAGCATGG...TGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp TTGTGCCAGGCGTCATATTCTATGTGCTTCAAATGCTTTTACAAGTTGCATTTAGCAGGCACTGGGCTGTaGTGTTGGACTGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LCQASYSMCFKCFYKLHLAGTGL*CWTVPR
Trigger: CCTGGGCACAGTCCAACACCACAGCCCAGTGCCTGC...TAAATGCAACTTGTAAAAGCATTTGAAGCACATAGAATATGACGCCTGGCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp ATGATGAACATAATTATGCCGATGAAGATGGCCACTGTCCCATCGGACACCATGCTCACCTCTCCCCCTTaGCATTGGGAAAAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: MMNIIMPMKMATVPSDTMLTSPP*HWEKPN
Trigger: ATTTGGCTTTTCCCAATGCCAAGGGGGAGAGGTGAG...CATGGTGTCCGATGGGACAGTGGCCATCTTCATCGGCATAATTATGTTCATCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577903.5
CDS-3UTR TCA 90 bp CTTGGAGGGTATGATGAACATAATTATGCCGATGAAGATGGCCACTGTCCCATCCCATATCCAACACTTTaGGGTCCCCGAAAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: LGGYDEHNYADEDGHCPIPYPTL*GPRKRR
Trigger: TCTTCTCTTTCGGGGACCTCAAAGTGTTGGATATGG...GATGGGACAGTGGCCATCTTCATCGGCATAATTATGTTCATCATACCCTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR TCA 90 bp CGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACATAGGAATGTTGTATTGTCTGTaGACACACACGTGTGCACTG +
Preference number: 4 (lower is better)
Translates to: RTHMRTHTCTHLLFQHIGMLYCL*THTCAL
Trigger: CAGTGCACACGTGTGTGTTCACAGACAATACAACAT...TCCTATGTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR TCA 90 bp GCATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCATGTTGTATTGTCTGTaGACACACACGTGTGCACTG +
Preference number: 4 (lower is better)
Translates to: AYTPSLQTRKRLCTHVPFMLYCL*THTCAL
Trigger: CAGTGCACACGTGTGTGTTCACAGACAATACAACAT...GAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR TCA 90 bp ATGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCAAGGCCACTCCAAGCCTaGATTTCAATAAATACAGTG +
Preference number: 4 (lower is better)
Translates to: MQAHTYAHTHMHTPFIPARPLQA*ISINTV
Trigger: CACTGTATTTATTGAAATTCAGGCTTGGAGTGGCCT...TGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS-3UTR GCA 90 bp TCAATAAATACAGTGCAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTAGGGCGATGCGTTTATaGAGGTTCCAGTGTTCCACC +
Preference number: 4 (lower is better)
Translates to: SINTVQVSLVTKLGIPRPRAMRL*RFQCST
Trigger: GGTGGAACACTGGAACCTGCATAAACGCATCGCCCT...AGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTGCACTGTATTTATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp TCAATAAATACAGTGCAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTACTGCCTCCAGGAGCTaGGTAACAGAAGGACCAAAG +
Preference number: 4 (lower is better)
Translates to: SINTVQVSLVTKLGIPRPTASRS*VTEGPK
Trigger: CTTTGGTCCTTCTGTTACCCAGCTCCTGGAGGCAGT...AGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTGCACTGTATTTATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314669.10
ENST00000444914.7
CDS-3UTR CCA 90 bp TCAATAAATACAGTGCAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTTTCCACGGCATCTTCTaGTTCACCGTCTTCCAGTCG +
Preference number: 4 (lower is better)
Translates to: SINTVQVSLVTKLGIPRPFHGIF*FTVFQS
Trigger: CGACTGGAAGACGGTGAACCAGAAGATGCCGTGGAA...AGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTGCACTGTATTTATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp TTGTGCCAGGCGTCATATTCTATGTGCTTCAAATGCTTTTACAAGTTGCATTTACTGGAGCTTGGAGCTTaGAGCTTGGGGTGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: LCQASYSMCFKCFYKLHLLELGA*SLGCPL
Trigger: GAGGGGACACCCCAAGCTCCAAGCTCCAAGCTCCAG...TAAATGCAACTTGTAAAAGCATTTGAAGCACATAGAATATGACGCCTGGCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR GCA 90 bp TCCCATAGACAAGCCTGGGGAACCTTCATCCCCCACCAAGTGTTACCTCCTGTTGCGTCATATTCTATGTaGTTCAAATGCTTTTACAAG +
Preference number: 4 (lower is better)
Translates to: SHRQAWGTFIPHQVLPPVASYSM*FKCFYK
Trigger: CTTGTAAAAGCATTTGAAGCACATAGAATATGACGC...AACAGGAGGTAACACTTGGTGGGGGATGAAGGTTCCCCAGGCTTGTCTATGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000577903.5
CDS-3UTR CCA 90 bp CATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAACCATTGACCCAGTCTaGCAATCAGAGTGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: HTPLPYRHARDYVHTCLSTIDPV*QSECFW
Trigger: CCAAAAACACTCTGATTGCCAGACTGGGTCAATGGT...TGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444914.7
CDS-3UTR TCA 90 bp TCAATAAATACAGTGCAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTGATGGAAATGGTCTCTaGATGATCTCAGAGGCATCC +
Preference number: 4 (lower is better)
Translates to: SINTVQVSLVTKLGIPRPDGNGL*MISEAS
Trigger: GGATGCCTCTGAGATCATTCAGAGACCATTTCCATC...AGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTGCACTGTATTTATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444914.7
ENST00000459818.2
CDS-3UTR TCA 90 bp TCAATAAATACAGTGCAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTAGTAGGCCTCTCTGCTaGTTCAGGAAGAAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: SINTVQVSLVTKLGIPRPSRPLC*FRKKFL
Trigger: CAGAAACTTCTTCCTGAATCAGCAGAGAGGCCTACT...AGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTGCACTGTATTTATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CCA 90 bp TTGTGCCAGGCGTCATATTCTATGTGCTTCAAATGCTTTTACAAGTTGCATTTATTTCTGCAAAGGTCATaGGGCCCAGCAGCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: LCQASYSMCFKCFYKLHLFLQRS*GPAACA
Trigger: AGCACAGGCTGCTGGGCCCCATGACCTTTGCAGAAA...TAAATGCAACTTGTAAAAGCATTTGAAGCACATAGAATATGACGCCTGGCACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CCA 90 bp TCAATAAATACAGTGCAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTGAGTGTTTTTGGAGTTaGGGAGGTGAGAGTAAGGAG +
Preference number: 4 (lower is better)
Translates to: SINTVQVSLVTKLGIPRPECFWS*GGESKE
Trigger: CTCCTTACTCTCACCTCCCCAACTCCAAAAACACTC...AGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTGCACTGTATTTATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444914.7
CDS-3UTR TCA 90 bp GCATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCTTATATAAAGCCAGTTaGGTGTTAACCATTGACCCA +
Preference number: 4 (lower is better)
Translates to: AYTPSLQTRKRLCTHVPFLYKAS*VLTIDP
Trigger: TGGGTCAATGGTTAACACTCAACTGGCTTTATATAA...GAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444914.7
CDS-3UTR TCA 90 bp TTGTGCCAGGCGTCATATTCTATGTGCTTCAAATGCTTTTACAAGTTGCATTTAAGTAGGCCTCTCTGCTaGTTCAGGAAGAAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LCQASYSMCFKCFYKLHLSRPLC*FRKKFL
Trigger: CAGAAACTTCTTCCTGAATCAGCAGAGAGGCCTACT...TAAATGCAACTTGTAAAAGCATTTGAAGCACATAGAATATGACGCCTGGCACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR GCA 90 bp TTGTGCCAGGCGTCATATTCTATGTGCTTCAAATGCTTTTACAAGTTGCATTTAGCATCTTTTCCCCAATaGCAAAGTTCTTCCGGAAGT +
Preference number: 4 (lower is better)
Translates to: LCQASYSMCFKCFYKLHLASFPQ*QSSSGS
Trigger: ACTTCCGGAAGAACTTTGGCATTGGGGAAAAGATGC...TAAATGCAACTTGTAAAAGCATTTGAAGCACATAGAATATGACGCCTGGCACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
3UTR CAA 72 bp AGGAAGAAGTTTCTGTATAAGTATTGGAGGATGACTTaGTGCCAGGCGTCATATTCTATGTGCTTCAAATGC +
Preference number: 4 (lower is better)
Translates to: RKKFLYKYWRMT*CQASYSMCFKC
Trigger: GCATTTGAAGCACATAGAATATGACGCCTGGCACAAAGTCATCCTCCAATACTTATACAGAAACTTCTTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp GATCTGGCCTTGCAGCACCAGGTTGGGTGCGGTGCCAGTCAGCGTGGCGATGCCCCTGGAGCTTGGAGCTaGGAGCTTGGGGTGTCCCCT +
Preference number: 5 (lower is better)
Translates to: DLALQHQVGCGASQRGDAPGAWS*ELGVSP
Trigger: AGGGGACACCCCAAGCTCCAAGCTCCAAGCTCCAGG...GGCATCGCCACGCTGACTGGCACCGCACCCAACCTGGTGCTGCAAGGCCAGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp GCGAGCTGTGCAGCTGGTCCAGGACGGCATGTGCGATGGGCACCATCATGGCTGGTTAGCCGCTTGGGGTaGCTCAGGGCCACAGGGTGG +
Preference number: 5 (lower is better)
Translates to: ASCAAGPGRHVRWAPSWLVSRLG*LRATGW
Trigger: CCACCCTGTGGCCCTGAGCAACCCCAAGCGGCTAAC...CAGCCATGATGGTGCCCATCGCACATGCCGTCCTGGACCAGCTGCACAGCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577903.5
CDS CCA 90 bp ACACGATCAGGTAGGAGCGATAGGCCCACAGGGCCTGCCAGCAGGTaGCCATGGTGTGGAGCAGCAAGGGCTGCTACAGCCACTGCCTCC +
Preference number: 5 (lower is better)
Translates to: TRSGRSDRPTGPASR*PWCGAARAATATAS
Trigger: GGAGGCAGTGGCTGTAGCAGCCCTTGCTGCTCCACACCATGGCCACCTGCTGGCAGGCCCTGTGGGCCTATCGCTCCTACCTGATCGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000545060.2
CDS-3UTR CAA 90 bp GCTGGCTTGCGAGCTGTGCAGCTGGTCCAGGACGGCATGTGCGATGGGCACCATGACGTTGCTGCTGGCTaGCGAGCTGTGCAGCTGGTC +
Preference number: 5 (lower is better)
Translates to: AGLRAVQLVQDGMCDGHHDVAAG*RAVQLV
Trigger: GACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTC...ATGGTGCCCATCGCACATGCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp GATCTGGCCTTGCAGCACCAGGTTGGGTGCGGTGCCAGTCAGCGTGGCGATGCCTCGAAGGTGGGGTTGTaGCTGCCCTCCTCGACGTTG +
Preference number: 5 (lower is better)
Translates to: DLALQHQVGCGASQRGDASKVGL*LPSSTL
Trigger: CAACGTCGAGGAGGGCAGCAACAACCCCACCTTCGA...GGCATCGCCACGCTGACTGGCACCGCACCCAACCTGGTGCTGCAAGGCCAGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp AAAGGTCATGGGGCCCAGCAGCCTGTGCTCGGTCTGGATGACGCAGTAGGCTGCCCCCAGCCTAGGGGCTaGGTGTGGTGGTGTTGGCCA +
Preference number: 5 (lower is better)
Translates to: KGHGAQQPVLGLDDAVGCPQPRG*VWWCWP
Trigger: TGGCCAACACCACCACACCAAGCCCCTAGGCTGGGG...GCAGCCTACTGCGTCATCCAGACCGAGCACAGGCTGCTGGGCCCCATGACCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS CCA 90 bp AGCGGCGGGAAGACCCTGGAGTCTCCCACGGTGCCCCCGAGGTTATaGGATGCAGTCACTGACATTCCCACAGACTGGCATTCCCCTGGG +
Preference number: 5 (lower is better)
Translates to: SGGKTLESPTVPPRL*DAVTDIPTDWHSPG
Trigger: CCCAGGGGAATGCCAGTCTGTGGGAATGTCAGTGACTGCATCCCATAACCTCGGGGGCACCGTGGGAGACTCCAGGGTCTTCCCGCCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444914.7
CDS CCA 90 bp TTGGAGTCCTTAAGATACTCGACGGCAACCTGGCAGGTGGAGACATaGCTGAGCGGCGGGAAGACCCTGGAGTCTCCCACGGTGCCCCCG +
Preference number: 5 (lower is better)
Translates to: LESLRYSTATWQVET*LSGGKTLESPTVPP
Trigger: CGGGGGCACCGTGGGAGACTCCAGGGTCTTCCCGCCGCTCAGCCATGTCTCCACCTGCCAGGTTGCCGTCGAGTATCTTAAGGACTCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444914.7
CDS-3UTR CAA 90 bp TTGTTGCTGCCCTCCTCGACGTTGCTGCTGGCTTGCGAGCTGTGCAGCTGGTCCGACGTTGCTGCTGGCTaGCGAGCTGTGCAGCTGGTC +
Preference number: 5 (lower is better)
Translates to: LLLPSSTLLLACELCSWSDVAAG*RAVQLV
Trigger: GACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTC...GGACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp CCGATCGCTCACTGCCCTTGGCCAGGGCATAGCCACCACCCAGCAATAACACGACTGCCCTCCTCGACGTaGCTGCTGGCTTGCGAGCTG +
Preference number: 5 (lower is better)
Translates to: PIAHCPWPGHSHHPAITRLPSST*LLACEL
Trigger: CAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAG...TCGTGTTATTGCTGGGTGGTGGCTATGCCCTGGCCAAGGGCAGTGAGCGATCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp GACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCCCTCCTCCTCGAAGGTGGGGTTGTaGCTGCCCTCCTCGACGTTG +
Preference number: 5 (lower is better)
Translates to: DFNSPEAVPVAAAGRPSSSKVGL*LPSSTL
Trigger: CAACGTCGAGGAGGGCAGCAACAACCCCACCTTCGA...GGAGGAGGGCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS-3UTR CAA 90 bp TTGTTGCTGCCCTCCTCGACGTTGCTGCTGGCTTGCGAGCTGTGCAGCTGGTCCAGCTCGAAGGTGGGGTaGTTGCTGCCCTCCTCGACG +
Preference number: 5 (lower is better)
Translates to: LLLPSSTLLLACELCSWSSSKVG*LLPSST
Trigger: CGTCGAGGAGGGCAGCAACAACCCCACCTTCGAGCT...GGACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp GCGAGCTGTGCAGCTGGTCCAGGACGGCATGTGCGATGGGCACCATCATGGCTGGGGATGCCCCAGCTGTaGATGGCCAGTGCGATGATC +
Preference number: 5 (lower is better)
Translates to: ASCAAGPGRHVRWAPSWLGMPQL*MASAMI
Trigger: GATCATCGCACTGGCCATCAACAGCTGGGGCATCCC...CAGCCATGATGGTGCCCATCGCACATGCCGTCCTGGACCAGCTGCACAGCTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp GGTTGTTGCTGCCCTCCTCGACGTTGCTGCTGGCTTGCGAGCTGTGCAGCTGGTCTTGGTGTGGTGGTGTaGGCCAGGCTTGGCAGGCAC +
Preference number: 5 (lower is better)
Translates to: GCCCPPRRCCWLASCAAGLGVVV*ARLGRH
Trigger: GTGCCTGCCAAGCCTGGCCAACACCACCACACCAAG...ACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp TTGGGGGAAGAGCGAGTTGATCTGGCCTTGCAGCACCAGGTTGGGTGCGGTGCCCCTGGAGCTTGGAGCTaGGAGCTTGGGGTGTCCCCT +
Preference number: 5 (lower is better)
Translates to: LGEERVDLALQHQVGCGAPGAWS*ELGVSP
Trigger: AGGGGACACCCCAAGCTCCAAGCTCCAAGCTCCAGG...GGCACCGCACCCAACCTGGTGCTGCAAGGCCAGATCAACTCGCTCTTCCCCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp GACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCCCTCCTCCCCTTTGGCCTGGAGCTaGGAGCTTGGAGCTTGGGGT +
Preference number: 5 (lower is better)
Translates to: DFNSPEAVPVAAAGRPSSPLAWS*ELGAWG
Trigger: ACCCCAAGCTCCAAGCTCCAAGCTCCAGGCCAAAGG...GGAGGAGGGCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS GCA 90 bp CACAGGGCCTGCCAGCAGGTGGCCATGGTGTGGAGCAGCAAGGGCTaGTACAGCCACTGCCTCCAGGAGCTGGGTAACAGAAGGACCAAA +
Preference number: 5 (lower is better)
Translates to: HRACQQVAMVWSSKG*YSHCLQELGNRRTK
Trigger: TTTGGTCCTTCTGTTACCCAGCTCCTGGAGGCAGTGGCTGTAGCAGCCCTTGCTGCTCCACACCATGGCCACCTGCTGGCAGGCCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000545060.2
CDS-3UTR CAA 90 bp TTGGGGGAAGAGCGAGTTGATCTGGCCTTGCAGCACCAGGTTGGGTGCGGTGCCCCTCCTTCTGGGGACTaGGTTCCTGGAGCTCGAAGG +
Preference number: 5 (lower is better)
Translates to: LGEERVDLALQHQVGCGAPPSGD*VPGARR
Trigger: CCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGGAGG...GGCACCGCACCCAACCTGGTGCTGCAAGGCCAGATCAACTCGCTCTTCCCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp TTGGGGGAAGAGCGAGTTGATCTGGCCTTGCAGCACCAGGTTGGGTGCGGTGCCCGAGTTGATCTGGCCTaGCAGCACCAGGTTGGGTGC +
Preference number: 5 (lower is better)
Translates to: LGEERVDLALQHQVGCGARVDLA*QHQVGC
Trigger: GCACCCAACCTGGTGCTGCAAGGCCAGATCAACTCG...GGCACCGCACCCAACCTGGTGCTGCAAGGCCAGATCAACTCGCTCTTCCCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp GATCTGGCCTTGCAGCACCAGGTTGGGTGCGGTGCCAGTCAGCGTGGCGATGCCCACCACGTTGCCGTTTaGGGGGAAGAGCGAGTTGAT +
Preference number: 5 (lower is better)
Translates to: DLALQHQVGCGASQRGDAHHVAV*GEERVD
Trigger: ATCAACTCGCTCTTCCCCCAAAACGGCAACGTGGTG...GGCATCGCCACGCTGACTGGCACCGCACCCAACCTGGTGCTGCAAGGCCAGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp GACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCCCTCCTCCGCGAAGTTCACCACGTaGCCGTTTTGGGGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: DFNSPEAVPVAAAGRPSSAKFTT*PFWGKS
Trigger: GCTCTTCCCCCAAAACGGCAACGTGGTGAACTTCGC...GGAGGAGGGCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS-3UTR CAA 90 bp AAAGGTCATGGGGCCCAGCAGCCTGTGCTCGGTCTGGATGACGCAGTAGGCTGCGGGATGCCCCAGCTGTaGATGGCCAGTGCGATGATC +
Preference number: 5 (lower is better)
Translates to: KGHGAQQPVLGLDDAVGCGMPQL*MASAMI
Trigger: GATCATCGCACTGGCCATCAACAGCTGGGGCATCCC...GCAGCCTACTGCGTCATCCAGACCGAGCACAGGCTGCTGGGCCCCATGACCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp CCTTCTGGGGACTTGGTTCCTGGAGCTCGAAGGTGGGGTTGTTGCTGCCCTCCTCTTGGTGTGGTGGTGTaGGCCAGGCTTGGCAGGCAC +
Preference number: 5 (lower is better)
Translates to: PSGDLVPGARRWGCCCPPLGVVV*ARLGRH
Trigger: GTGCCTGCCAAGCCTGGCCAACACCACCACACCAAG...AGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp GATGGCCTTTTCTGCAAAGGTCATGGGGCCCAGCAGCCTGTGCTCGGTCTGGATCTTGGAGCTTGGAGCTaGGGGTGTCCCCTCCGGGCT +
Preference number: 5 (lower is better)
Translates to: DGLFCKGHGAQQPVLGLDLGAWS*GCPLRA
Trigger: AGCCCGGAGGGGACACCCCAAGCTCCAAGCTCCAAG...ATCCAGACCGAGCACAGGCTGCTGGGCCCCATGACCTTTGCAGAAAAGGCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp GACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCCCTCCTCCCGTGCCTTTCAGCCTTaGGCCTGGAGCTTGGAGCTT +
Preference number: 5 (lower is better)
Translates to: DFNSPEAVPVAAAGRPSSRAFQP*AWSLEL
Trigger: AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACG...GGAGGAGGGCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS CCA 90 bp AGGCCTCCTTACTGGGGACGAGGATGGGCAGAGGCAGCAGGAGAATaGGCACGAAGAACACGATCAGGTAGGAGCGATAGGCCCACAGGG +
Preference number: 5 (lower is better)
Translates to: RPPYWGRGWAEAAGE*ARRTRSGRSDRPTG
Trigger: CCCTGTGGGCCTATCGCTCCTACCTGATCGTGTTCTTCGTGCCCATTCTCCTGCTGCCTCTGCCCATCCTCGTCCCCAGTAAGGAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000545060.2
CDS-3UTR CAA 90 bp GAAGAGGGGGATGCCCCAGCTGTTGATGGCCAGTGCGATGATCAGGACTCCAATCTGCCCTCCTCGACGTaGCTGCTGGCTTGCGAGCTG +
Preference number: 5 (lower is better)
Translates to: EEGDAPAVDGQCDDQDSNLPSST*LLACEL
Trigger: CAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAG...ATTGGAGTCCTGATCATCGCACTGGCCATCAACAGCTGGGGCATCCCCCTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp CCTTCTGGGGACTTGGTTCCTGGAGCTCGAAGGTGGGGTTGTTGCTGCCCTCCTTGGGGGAAGAGCGAGTaGATCTGGCCTTGCAGCACC +
Preference number: 5 (lower is better)
Translates to: PSGDLVPGARRWGCCCPPWGKSE*IWPCST
Trigger: GGTGCTGCAAGGCCAGATCAACTCGCTCTTCCCCCA...AGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp CCCGAGCATGTGAGCCCCAGATGTGTCCTCCTCCCAACCCCTGCAACTCTCACCGCGAAGTTCACCACGTaGCCGTTTTGGGGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: PEHVSPRCVLLPTPATLTAKFTT*PFWGKS
Trigger: GCTCTTCCCCCAAAACGGCAACGTGGTGAACTTCGC...GGTGAGAGTTGCAGGGGTTGGGAGGAGGACACATCTGGGGCTCACATGCTCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000577903.5
CDS-3UTR CAA 90 bp AGGATTAGCGGGGCAGGCCGCACCCCAACGATGAGGAGGACACGGAGGGCGATGTCTCACCTCTCCCCCTaGGCATTGGGAAAAGCCAAA +
Preference number: 5 (lower is better)
Translates to: RISGAGRTPTMRRTRRAMSHLSP*ALGKAK
Trigger: TTTGGCTTTTCCCAATGCCAAGGGGGAGAGGTGAGA...CATCGCCCTCCGTGTCCTCCTCATCGTTGGGGTGCGGCCTGCCCCGCTAATCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000577903.5
CDS-3UTR CAA 90 bp CCAAGTGTTACCTCCTGTTCTGCAATGGGGGCCCTATACCCTTCCCTCCTTCCCGGCTGGGTTAGCCGCTaGGGGTTGCTCAGGGCCACA +
Preference number: 5 (lower is better)
Translates to: PSVTSCSAMGALYPSLLPGWVSR*GLLRAT
Trigger: TGTGGCCCTGAGCAACCCCAAGCGGCTAACCCAGCC...GGGAAGGAGGGAAGGGTATAGGGCCCCCATTGCAGAACAGGAGGTAACACTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577903.5
CDS TCA 90 bp CCTGGAGTCTCCCACGGTGCCCCCGAGGTTATGGGATGCAGTCACTaGCATTCCCACAGACTGGCATTCCCCTGGGCTCTCGAAACTGGA +
Preference number: 5 (lower is better)
Translates to: PGVSHGAPEVMGCSH*HSHRLAFPWALETG
Trigger: TCCAGTTTCGAGAGCCCAGGGGAATGCCAGTCTGTGGGAATGTCAGTGACTGCATCCCATAACCTCGGGGGCACCGTGGGAGACTCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444914.7
CDS CCA 90 bp TGGTGTGGAGCAGCAAGGGCTGCTACAGCCACTGCCTCCAGGAGCTaGGTAACAGAAGGACCAAAGATGCAGCCAAGCAGGCAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: WCGAARAATATASRS*VTEGPKMQPSRQVA
Trigger: TGCCACCTGCCTGCTTGGCTGCATCTTTGGTCCTTCTGTTACCCAGCTCCTGGAGGCAGTGGCTGTAGCAGCCCTTGCTGCTCCACACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444914.7
CDS-3UTR CAA 90 bp GCGAGCTGTGCAGCTGGTCCAGGACGGCATGTGCGATGGGCACCATCATGGCTGTGCCCATTATCAAGCTaGGTCACCTCCTTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: ASCAAGPGRHVRWAPSWLCPLSS*VTSFWG
Trigger: TCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGCA...CAGCCATGATGGTGCCCATCGCACATGCCGTCCTGGACCAGCTGCACAGCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp GCCCATTATCAAGCTTGGTCACCTCCTTCTGGGGACTTGGTTCCTGGAGCTCGACCTTGCAGCACCAGGTaGGGTGCGGTGCCAGTCAGC +
Preference number: 5 (lower is better)
Translates to: AHYQAWSPPSGDLVPGARPCSTR*GAVPVS
Trigger: GCTGACTGGCACCGCACCCAACCTGGTGCTGCAAGG...TCGAGCTCCAGGAACCAAGTCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp TTTAATGTGACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCCTTGGAGCTTGGAGCTaGGGGTGTCCCCTCCGGGCT +
Preference number: 5 (lower is better)
Translates to: FNVTLTAQRLFPWQLLAGLGAWS*GCPLRA
Trigger: AGCCCGGAGGGGACACCCCAAGCTCCAAGCTCCAAG...GCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTCACATTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS CCA 90 bp TTCACAGCTTACTGGGGACGAGGATGGGCAGAGGCAGCAGGAGAATaGGCACGAAGAACACGATCAGGTAGGAGCGATAGGCCCACAGGG +
Preference number: 5 (lower is better)
Translates to: FTAYWGRGWAEAAGE*ARRTRSGRSDRPTG
Trigger: CCCTGTGGGCCTATCGCTCCTACCTGATCGTGTTCTTCGTGCCCATTCTCCTGCTGCCTCTGCCCATCCTCGTCCCCAGTAAGCTGTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577903.5
CDS-3UTR CAA 90 bp CAAGACCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGCTGCCCTCCTCGACGTaGCTGCTGGCTTGCGAGCTG +
Preference number: 5 (lower is better)
Translates to: QDLGHQRGHVVLSVNTHVLPSST*LLACEL
Trigger: CAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAG...CACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGGTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp TTTAATGTGACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCAGCTCGAAGGTGGGGTaGTTGCTGCCCTCCTCGACG +
Preference number: 5 (lower is better)
Translates to: FNVTLTAQRLFPWQLLAGSSKVG*LLPSST
Trigger: CGTCGAGGAGGGCAGCAACAACCCCACCTTCGAGCT...GCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTCACATTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS-3UTR CAA 90 bp TGCCCATTATCAAGCTTGGTCACCTCCTTCTGGGGACTTGGTTCCTGGAGCTCGAGCTCGAAGGTGGGGTaGTTGCTGCCCTCCTCGACG +
Preference number: 5 (lower is better)
Translates to: CPLSSLVTSFWGLGSWSSSSKVG*LLPSST
Trigger: CGTCGAGGAGGGCAGCAACAACCCCACCTTCGAGCT...CGAGCTCCAGGAACCAAGTCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp GGCCCGATCGCTCACTGCCCTTGGCCAGGGCATAGCCACCACCCAGCAATAACATGCCCATTATCAAGCTaGGTCACCTCCTTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: GPIAHCPWPGHSHHPAITCPLSS*VTSFWG
Trigger: TCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGCA...TGTTATTGCTGGGTGGTGGCTATGCCCTGGCCAAGGGCAGTGAGCGATCGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp CAAGACCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGCCTTGCAGCACCAGGTaGGGTGCGGTGCCAGTCAGC +
Preference number: 5 (lower is better)
Translates to: QDLGHQRGHVVLSVNTHVPCSTR*GAVPVS
Trigger: GCTGACTGGCACCGCACCCAACCTGGTGCTGCAAGG...CACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGGTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp GAAGAGGGGGATGCCCCAGCTGTTGATGGCCAGTGCGATGATCAGGACTCCAATCGAGTTGATCTGGCCTaGCAGCACCAGGTTGGGTGC +
Preference number: 5 (lower is better)
Translates to: EEGDAPAVDGQCDDQDSNRVDLA*QHQVGC
Trigger: GCACCCAACCTGGTGCTGCAAGGCCAGATCAACTCG...ATTGGAGTCCTGATCATCGCACTGGCCATCAACAGCTGGGGCATCCCCCTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp CCGATCGCTCACTGCCCTTGGCCAGGGCATAGCCACCACCCAGCAATAACACGACACCACGTTGCCGTTTaGGGGGAAGAGCGAGTTGAT +
Preference number: 5 (lower is better)
Translates to: PIAHCPWPGHSHHPAITRHHVAV*GEERVD
Trigger: ATCAACTCGCTCTTCCCCCAAAACGGCAACGTGGTG...TCGTGTTATTGCTGGGTGGTGGCTATGCCCTGGCCAAGGGCAGTGAGCGATCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp GCTGGCTTGCGAGCTGTGCAGCTGGTCCAGGACGGCATGTGCGATGGGCACCATGTCAGCCCTGGGAACTaGGAGGGTATGATGAACATA +
Preference number: 5 (lower is better)
Translates to: AGLRAVQLVQDGMCDGHHVSPGN*EGMMNI
Trigger: TATGTTCATCATACCCTCCAAGTTCCCAGGGCTGAC...ATGGTGCCCATCGCACATGCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp GCTGGCTTGCGAGCTGTGCAGCTGGTCCAGGACGGCATGTGCGATGGGCACCATGCCATATCCAACACTTaGAGGTCCCCGAAAGAGAAG +
Preference number: 5 (lower is better)
Translates to: AGLRAVQLVQDGMCDGHHAISNT*RSPKEK
Trigger: CTTCTCTTTCGGGGACCTCAAAGTGTTGGATATGGC...ATGGTGCCCATCGCACATGCCGTCCTGGACCAGCTGCACAGCTCGCAAGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp CCTTCTGGGGACTTGGTTCCTGGAGCTCGAAGGTGGGGTTGTTGCTGCCCTCCTAGGACTCCAATGATGTaGAGGAGGAATCCTGCCCGG +
Preference number: 5 (lower is better)
Translates to: PSGDLVPGARRWGCCCPPRTPMM*RRNPAR
Trigger: CCGGGCAGGATTCCTCCTCAACATCATTGGAGTCCT...AGGAGGGCAGCAACAACCCCACCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp CAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTGGGGCACCAGAGAGGCTTGGTGTGGTGGTGTaGGCCAGGCTTGGCAGGCAC +
Preference number: 5 (lower is better)
Translates to: QVSLVTKLGIPRPGAPERLGVVV*ARLGRH
Trigger: GTGCCTGCCAAGCCTGGCCAACACCACCACACCAAG...CCTCTCTGGTGCCCCAGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp CAAGACCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGCCCCAGCCTAGGGGCTaGGTGTGGTGGTGTTGGCCA +
Preference number: 5 (lower is better)
Translates to: QDLGHQRGHVVLSVNTHVPQPRG*VWWCWP
Trigger: TGGCCAACACCACCACACCAAGCCCCTAGGCTGGGG...CACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGGTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp CAAGACCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGGACGTTGCTGCTGGCTaGCGAGCTGTGCAGCTGGTC +
Preference number: 5 (lower is better)
Translates to: QDLGHQRGHVVLSVNTHVDVAAG*RAVQLV
Trigger: GACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTC...CACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGGTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp TGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACCTGCCCTCCTCGACGTaGCTGCTGGCTTGCGAGCTG +
Preference number: 5 (lower is better)
Translates to: CRRTHMRTHTCTHLLFQHLPSST*LLACEL
Trigger: CAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAG...GTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp GCCCATTATCAAGCTTGGTCACCTCCTTCTGGGGACTTGGTTCCTGGAGCTCGATCGAAGGTGGGGTTGTaGCTGCCCTCCTCGACGTTG +
Preference number: 5 (lower is better)
Translates to: AHYQAWSPPSGDLVPGARSKVGL*LPSSTL
Trigger: CAACGTCGAGGAGGGCAGCAACAACCCCACCTTCGA...TCGAGCTCCAGGAACCAAGTCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp CCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGTGCACCCTCCTTCTGGGGACTaGGTTCCTGGAGCTCGAAGG +
Preference number: 5 (lower is better)
Translates to: PGAPERACCIVCEHTRVHPPSGD*VPGARR
Trigger: CCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGGAGG...GTGCACACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp TTTAATGTGACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCCGAGTTGATCTGGCCTaGCAGCACCAGGTTGGGTGC +
Preference number: 5 (lower is better)
Translates to: FNVTLTAQRLFPWQLLAGRVDLA*QHQVGC
Trigger: GCACCCAACCTGGTGCTGCAAGGCCAGATCAACTCG...GCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTCACATTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS-3UTR CAA 90 bp AACCAGGAGGCGAAGTTCACCACGTTGCCGTTTTGGGGGAAGAGCGAGTTGATCCGAGTTGATCTGGCCTaGCAGCACCAGGTTGGGTGC +
Preference number: 5 (lower is better)
Translates to: NQEAKFTTLPFWGKSELIRVDLA*QHQVGC
Trigger: GCACCCAACCTGGTGCTGCAAGGCCAGATCAACTCG...GATCAACTCGCTCTTCCCCCAAAACGGCAACGTGGTGAACTTCGCCTCCTGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp GATGGCCTTTTCTGCAAAGGTCATGGGGCCCAGCAGCCTGTGCTCGGTCTGGATCACCACGTTGCCGTTTaGGGGGAAGAGCGAGTTGAT +
Preference number: 5 (lower is better)
Translates to: DGLFCKGHGAQQPVLGLDHHVAV*GEERVD
Trigger: ATCAACTCGCTCTTCCCCCAAAACGGCAACGTGGTG...ATCCAGACCGAGCACAGGCTGCTGGGCCCCATGACCTTTGCAGAAAAGGCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp TTGTTGCTGCCCTCCTCGACGTTGCTGCTGGCTTGCGAGCTGTGCAGCTGGTCCAAGTTCTTCCGGAAGTaGAAGCCCAGGAAGAGGATC +
Preference number: 5 (lower is better)
Translates to: LLLPSSTLLLACELCSWSKFFRK*KPRKRI
Trigger: GATCCTCTTCCTGGGCTTCAACTTCCGGAAGAACTT...GGACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp CAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTGGGGCACCAGAGAGGGGGATGCCCCAGCTGTaGATGGCCAGTGCGATGATC +
Preference number: 5 (lower is better)
Translates to: QVSLVTKLGIPRPGAPERGMPQL*MASAMI
Trigger: GATCATCGCACTGGCCATCAACAGCTGGGGCATCCC...CCTCTCTGGTGCCCCAGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp CATAGCCACCACCCAGCAATAACACGATATTCCACGGCATCTTCTGGTTCACCGCCCCAGCCTAGGGGCTaGGTGTGGTGGTGTTGGCCA +
Preference number: 5 (lower is better)
Translates to: HSHHPAITRYSTASSGSPPQPRG*VWWCWP
Trigger: TGGCCAACACCACCACACCAAGCCCCTAGGCTGGGG...CGGTGAACCAGAAGATGCCGTGGAATATCGTGTTATTGCTGGGTGGTGGCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp TGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACCTTGGAGCTTGGAGCTaGGGGTGTCCCCTCCGGGCT +
Preference number: 5 (lower is better)
Translates to: CRRTHMRTHTCTHLLFQHLGAWS*GCPLRA
Trigger: AGCCCGGAGGGGACACCCCAAGCTCCAAGCTCCAAG...GTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp GACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCCCTCCTCCAGAGGGCATGTTGTATaGTCTGTGAACACACACGTG +
Preference number: 5 (lower is better)
Translates to: DFNSPEAVPVAAAGRPSSRGHVV*SVNTHV
Trigger: CACGTGTGTGTTCACAGACAATACAACATGCCCTCT...GGAGGAGGGCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS-3UTR CAA 90 bp TGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACGACGTTGCTGCTGGCTaGCGAGCTGTGCAGCTGGTC +
Preference number: 5 (lower is better)
Translates to: CRRTHMRTHTCTHLLFQHDVAAG*RAVQLV
Trigger: GACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTC...GTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp CAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTCTGCCCTCCTCGACGTaGCTGCTGGCTTGCGAGCTG +
Preference number: 5 (lower is better)
Translates to: QEIMYTRAFQPLAWSLELLPSST*LLACEL
Trigger: CAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAG...AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp CCAGGGCATAGCCACCACCCAGCAATAACACGATATTCCACGGCATCTTCTGGTTCGAAGGTGGGGTTGTaGCTGCCCTCCTCGACGTTG +
Preference number: 5 (lower is better)
Translates to: PGHSHHPAITRYSTASSGSKVGL*LPSSTL
Trigger: CAACGTCGAGGAGGGCAGCAACAACCCCACCTTCGA...ACCAGAAGATGCCGTGGAATATCGTGTTATTGCTGGGTGGTGGCTATGCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp TGCCCATTATCAAGCTTGGTCACCTCCTTCTGGGGACTTGGTTCCTGGAGCTCGGCGAAGTTCACCACGTaGCCGTTTTGGGGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: CPLSSLVTSFWGLGSWSSAKFTT*PFWGKS
Trigger: GCTCTTCCCCCAAAACGGCAACGTGGTGAACTTCGC...CGAGCTCCAGGAACCAAGTCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp CCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGTGCACTGCAGTGGGGTCAGCTaGTTTCCCAGCCACTCTGAC +
Preference number: 5 (lower is better)
Translates to: PGAPERACCIVCEHTRVHCSGVS*FPSHSD
Trigger: GTCAGAGTGGCTGGGAAACAAGCTGACCCCACTGCA...GTGCACACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp TTTAATGTGACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCTGCAGTGGGGTCAGCTaGTTTCCCAGCCACTCTGAC +
Preference number: 5 (lower is better)
Translates to: FNVTLTAQRLFPWQLLAGCSGVS*FPSHSD
Trigger: GTCAGAGTGGCTGGGAAACAAGCTGACCCCACTGCA...GCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTCACATTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS-3UTR CAA 90 bp GAAGAGGGGGATGCCCCAGCTGTTGATGGCCAGTGCGATGATCAGGACTCCAATAGGACTCCAATGATGTaGAGGAGGAATCCTGCCCGG +
Preference number: 5 (lower is better)
Translates to: EEGDAPAVDGQCDDQDSNRTPMM*RRNPAR
Trigger: CCGGGCAGGATTCCTCCTCAACATCATTGGAGTCCT...ATTGGAGTCCTGATCATCGCACTGGCCATCAACAGCTGGGGCATCCCCCTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp CAAGACCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGGGGATGCCCCAGCTGTaGATGGCCAGTGCGATGATC +
Preference number: 5 (lower is better)
Translates to: QDLGHQRGHVVLSVNTHVGMPQL*MASAMI
Trigger: GATCATCGCACTGGCCATCAACAGCTGGGGCATCCC...CACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGGTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp CGCAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCGGGATGCCCCAGCTGTaGATGGCCAGTGCGATGATC +
Preference number: 5 (lower is better)
Translates to: RKRLCTHVPFSLWPGAWSGMPQL*MASAMI
Trigger: GATCATCGCACTGGCCATCAACAGCTGGGGCATCCC...GCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp CAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTCCCCAGCCTAGGGGCTaGGTGTGGTGGTGTTGGCCA +
Preference number: 5 (lower is better)
Translates to: QEIMYTRAFQPLAWSLELPQPRG*VWWCWP
Trigger: TGGCCAACACCACCACACCAAGCCCCTAGGCTGGGG...AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp ATGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACTTGGAGCTTGGAGCTaGGGGTGTCCCCTCCGGGCT +
Preference number: 5 (lower is better)
Translates to: MQAHTYAHTHMHTPFIPALGAWS*GCPLRA
Trigger: AGCCCGGAGGGGACACCCCAAGCTCCAAGCTCCAAG...TGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp CGCAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCCCTTTGGCCTGGAGCTaGGAGCTTGGAGCTTGGGGT +
Preference number: 5 (lower is better)
Translates to: RKRLCTHVPFSLWPGAWSPLAWS*ELGAWG
Trigger: ACCCCAAGCTCCAAGCTCCAAGCTCCAGGCCAAAGG...GCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp GCCCATTATCAAGCTTGGTCACCTCCTTCTGGGGACTTGGTTCCTGGAGCTCGACGTGCCTTTCAGCCTTaGGCCTGGAGCTTGGAGCTT +
Preference number: 5 (lower is better)
Translates to: AHYQAWSPPSGDLVPGARRAFQP*AWSLEL
Trigger: AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACG...TCGAGCTCCAGGAACCAAGTCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp GGTTGTTGCTGCCCTCCTCGACGTTGCTGCTGGCTTGCGAGCTGTGCAGCTGGTAGAGGGCATGTTGTATaGTCTGTGAACACACACGTG +
Preference number: 5 (lower is better)
Translates to: GCCCPPRRCCWLASCAAGRGHVV*SVNTHV
Trigger: CACGTGTGTGTTCACAGACAATACAACATGCCCTCT...ACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTCGAGGAGGGCAGCAACAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp GCGAGCTGTGCAGCTGGTCCAGGACGGCATGTGCGATGGGCACCATCATGGCTGTATTGGAGGATGACTTaGTGCCAGGCGTCATATTCT +
Preference number: 5 (lower is better)
Translates to: ASCAAGPGRHVRWAPSWLYWRMT*CQASYS
Trigger: AGAATATGACGCCTGGCACAAAGTCATCCTCCAATA...CAGCCATGATGGTGCCCATCGCACATGCCGTCCTGGACCAGCTGCACAGCTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp CAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTGACGTTGCTGCTGGCTaGCGAGCTGTGCAGCTGGTC +
Preference number: 5 (lower is better)
Translates to: QEIMYTRAFQPLAWSLELDVAAG*RAVQLV
Trigger: GACCAGCTGCACAGCTCGCAAGCCAGCAGCAACGTC...AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp CAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTAGCTCGAAGGTGGGGTaGTTGCTGCCCTCCTCGACG +
Preference number: 5 (lower is better)
Translates to: QEIMYTRAFQPLAWSLELSSKVG*LLPSST
Trigger: CGTCGAGGAGGGCAGCAACAACCCCACCTTCGAGCT...AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp GCATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCCCTTGCAGCACCAGGTaGGGTGCGGTGCCAGTCAGC +
Preference number: 5 (lower is better)
Translates to: AYTPSLQTRKRLCTHVPFPCSTR*GAVPVS
Trigger: GCTGACTGGCACCGCACCCAACCTGGTGCTGCAAGG...GAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp GACTCCAATGATGTTGAGGAGGAATCCTGCCCGGGCCATATCCAACACTTTGAGTGGGGGAAGAGCGAGTaGATCTGGCCTTGCAGCACC +
Preference number: 5 (lower is better)
Translates to: DSNDVEEESCPGHIQHFEWGKSE*IWPCST
Trigger: GGTGCTGCAAGGCCAGATCAACTCGCTCTTCCCCCA...CTCAAAGTGTTGGATATGGCCCGGGCAGGATTCCTCCTCAACATCATTGGAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp CAAGACCTGGGGCACCAGAGAGGGCATGTTGTATTGTCTGTGAACACACACGTGTGCAGTGGGGTCAGCTaGTTTCCCAGCCACTCTGAC +
Preference number: 5 (lower is better)
Translates to: QDLGHQRGHVVLSVNTHVCSGVS*FPSHSD
Trigger: GTCAGAGTGGCTGGGAAACAAGCTGACCCCACTGCA...CACGTGTGTGTTCACAGACAATACAACATGCCCTCTCTGGTGCCCCAGGTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp ATGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACTTGGTGTGGTGGTGTaGGCCAGGCTTGGCAGGCAC +
Preference number: 5 (lower is better)
Translates to: MQAHTYAHTHMHTPFIPALGVVV*ARLGRH
Trigger: GTGCCTGCCAAGCCTGGCCAACACCACCACACCAAG...TGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp CAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTCTTGGTGTGGTGGTGTaGGCCAGGCTTGGCAGGCAC +
Preference number: 5 (lower is better)
Translates to: QEIMYTRAFQPLAWSLELLGVVV*ARLGRH
Trigger: GTGCCTGCCAAGCCTGGCCAACACCACCACACCAAG...AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp AAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTGCCTGGAGCTTGGAGCTaGGAGCTTGGGGTGTCCCCT +
Preference number: 5 (lower is better)
Translates to: KRLCTHVPFSLWPGAWSLPGAWS*ELGVSP
Trigger: AGGGGACACCCCAAGCTCCAAGCTCCAAGCTCCAGG...CAAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp CTTGGAGGGTATGATGAACATAATTATGCCGATGAAGATGGCCACTGTCCCATCTCGGACACCATGCTGTaGGTGGAGGGGGCGCGGGGA +
Preference number: 5 (lower is better)
Translates to: LGGYDEHNYADEDGHCPISDTML*VEGARG
Trigger: TCCCCGCGCCCCCTCCACCAACAGCATGGTGTCCGA...GATGGGACAGTGGCCATCTTCATCGGCATAATTATGTTCATCATACCCTCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577903.5
CDS-3UTR CAA 90 bp AAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTGCCTCCTTCTGGGGACTaGGTTCCTGGAGCTCGAAGG +
Preference number: 5 (lower is better)
Translates to: KRLCTHVPFSLWPGAWSLPPSGD*VPGARR
Trigger: CCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGGAGG...CAAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp TGCATCTTTTCCCCAATGCCAAAGTTCTTCCGGAAGTTGAAGCCCAGGAAGAGGCCTCCTTCTGGGGACTaGGTTCCTGGAGCTCGAAGG +
Preference number: 5 (lower is better)
Translates to: CIFSPMPKFFRKLKPRKRPPSGD*VPGARR
Trigger: CCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGGAGG...CCTCTTCCTGGGCTTCAACTTCCGGAAGAACTTTGGCATTGGGGAAAAGATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp ATGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACGAGTTGATCTGGCCTaGCAGCACCAGGTTGGGTGC +
Preference number: 5 (lower is better)
Translates to: MQAHTYAHTHMHTPFIPARVDLA*QHQVGC
Trigger: GCACCCAACCTGGTGCTGCAAGGCCAGATCAACTCG...TGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp CACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGCCTTGGGGGAAGAGCGAGTaGATCTGGCCTTGCAGCACC +
Preference number: 5 (lower is better)
Translates to: HPFLTDTQEIMYTRAFQPWGKSE*IWPCST
Trigger: GGTGCTGCAAGGCCAGATCAACTCGCTCTTCCCCCA...AGGCTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp CAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTGGGGCACCAGAGAGGACCATGCTCTCCCCCTaGGCATTGGGAAAAGCCAAA +
Preference number: 5 (lower is better)
Translates to: QVSLVTKLGIPRPGAPERTMLSP*ALGKAK
Trigger: TTTGGCTTTTCCCAATGCCAAGGGGGAGAGCATGGT...CCTCTCTGGTGCCCCAGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp CCCACCAAGTGTTACCTCCTGTTCTGCAATGGGGGCCCTATACCCTTCCCTCCTGCCATATCCAACACTTaGAGGTCCCCGAAAGAGAAG +
Preference number: 5 (lower is better)
Translates to: PTKCYLLFCNGGPIPFPPAISNT*RSPKEK
Trigger: CTTCTCTTTCGGGGACCTCAAAGTGTTGGATATGGC...AGGAGGGAAGGGTATAGGGCCCCCATTGCAGAACAGGAGGTAACACTTGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577903.5
CDS-3UTR CAA 90 bp ATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGCCCCAGCCTAGGGGCTaGGTGTGGTGGTGTTGGCCA +
Preference number: 5 (lower is better)
Translates to: IHPFLTDTQEIMYTRAFQPQPRG*VWWCWP
Trigger: TGGCCAACACCACCACACCAAGCCCCTAGGCTGGGG...CTGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp GCATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCCCTGGAGCTTGGAGCTaGGAGCTTGGGGTGTCCCCT +
Preference number: 5 (lower is better)
Translates to: AYTPSLQTRKRLCTHVPFPGAWS*ELGVSP
Trigger: AGGGGACACCCCAAGCTCCAAGCTCCAAGCTCCAGG...GAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp ATGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACCTTTGGCCTGGAGCTaGGAGCTTGGAGCTTGGGGT +
Preference number: 5 (lower is better)
Translates to: MQAHTYAHTHMHTPFIPAPLAWS*ELGAWG
Trigger: ACCCCAAGCTCCAAGCTCCAAGCTCCAGGCCAAAGG...TGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp CATAATTATGCCGATGAAGATGGCCACTGTCCCATCGGACACCATGCTCTCCCCTGCCCATTATCAAGCTaGGTCACCTCCTTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: HNYADEDGHCPIGHHALPCPLSS*VTSFWG
Trigger: TCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGCA...GGGGAGAGCATGGTGTCCGATGGGACAGTGGCCATCTTCATCGGCATAATTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp CACCCAGCAATAACACGATATTCCACGGCATCTTCTGGTTCACCGTCTTCCAGTGCGAAGTTCACCACGTaGCCGTTTTGGGGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: HPAITRYSTASSGSPSSSAKFTT*PFWGKS
Trigger: GCTCTTCCCCCAAAACGGCAACGTGGTGAACTTCGC...ACTGGAAGACGGTGAACCAGAAGATGCCGTGGAATATCGTGTTATTGCTGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp TTTAATGTGACTTTAACAGCCCAGAGGCTGTTCCCGTGGCAGCTGCTGGCAGGCGTCAGCCCTGGGAACTaGGAGGGTATGATGAACATA +
Preference number: 5 (lower is better)
Translates to: FNVTLTAQRLFPWQLLAGVSPGN*EGMMNI
Trigger: TATGTTCATCATACCCTCCAAGTTCCCAGGGCTGAC...GCCTGCCAGCAGCTGCCACGGGAACAGCCTCTGGGCTGTTAAAGTCACATTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
CDS-3UTR CAA 90 bp GACTCCAATGATGTTGAGGAGGAATCCTGCCCGGGCCATATCCAACACTTTGAGAGGACTCCAATGATGTaGAGGAGGAATCCTGCCCGG +
Preference number: 5 (lower is better)
Translates to: DSNDVEEESCPGHIQHFERTPMM*RRNPAR
Trigger: CCGGGCAGGATTCCTCCTCAACATCATTGGAGTCCT...CTCAAAGTGTTGGATATGGCCCGGGCAGGATTCCTCCTCAACATCATTGGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp CAGCCCTGGGAACTTGGAGGGTATGATGAACATAATTATGCCGATGAAGATGGCCCTTTGGCCTGGAGCTaGGAGCTTGGAGCTTGGGGT +
Preference number: 5 (lower is better)
Translates to: QPWELGGYDEHNYADEDGPLAWS*ELGAWG
Trigger: ACCCCAAGCTCCAAGCTCCAAGCTCCAGGCCAAAGG...GCCATCTTCATCGGCATAATTATGTTCATCATACCCTCCAAGTTCCCAGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp CATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCATCGAAGGTGGGGTTGTaGCTGCCCTCCTCGACGTTG +
Preference number: 5 (lower is better)
Translates to: HTPLPYRHARDYVHTCLSSKVGL*LPSSTL
Trigger: CAACGTCGAGGAGGGCAGCAACAACCCCACCTTCGA...TGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp CATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCACCTCCTTCTGGGGACTaGGTTCCTGGAGCTCGAAGG +
Preference number: 5 (lower is better)
Translates to: HTPLPYRHARDYVHTCLSPPSGD*VPGARR
Trigger: CCTTCGAGCTCCAGGAACCAAGTCCCCAGAAGGAGG...TGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp CATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCATGGGGGAAGAGCGAGTaGATCTGGCCTTGCAGCACC +
Preference number: 5 (lower is better)
Translates to: HTPLPYRHARDYVHTCLSWGKSE*IWPCST
Trigger: GGTGCTGCAAGGCCAGATCAACTCGCTCTTCCCCCA...TGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp CAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTCACCACGTTGCCGTTTaGGGGGAAGAGCGAGTTGAT +
Preference number: 5 (lower is better)
Translates to: QEIMYTRAFQPLAWSLELHHVAV*GEERVD
Trigger: ATCAACTCGCTCTTCCCCCAAAACGGCAACGTGGTG...AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp AAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTGCACCACGTTGCCGTTTaGGGGGAAGAGCGAGTTGAT +
Preference number: 5 (lower is better)
Translates to: KRLCTHVPFSLWPGAWSLHHVAV*GEERVD
Trigger: ATCAACTCGCTCTTCCCCCAAAACGGCAACGTGGTG...CAAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp CGGGTGAACCAGAGCAGCACCAGGATGACGAATAGGATGCTGATGGCCTTTTCTGTCAGCCCTGGGAACTaGGAGGGTATGATGAACATA +
Preference number: 5 (lower is better)
Translates to: RVNQSSTRMTNRMLMAFSVSPGN*EGMMNI
Trigger: TATGTTCATCATACCCTCCAAGTTCCCAGGGCTGAC...AGAAAAGGCCATCAGCATCCTATTCGTCATCCTGGTGCTGCTCTGGTTCACCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp GCTCACTGCCCTTGGCCAGGGCATAGCCACCACCCAGCAATAACACGATATTCCTATTGGAGGATGACTTaGTGCCAGGCGTCATATTCT +
Preference number: 5 (lower is better)
Translates to: AHCPWPGHSHHPAITRYSYWRMT*CQASYS
Trigger: AGAATATGACGCCTGGCACAAAGTCATCCTCCAATA...GGAATATCGTGTTATTGCTGGGTGGTGGCTATGCCCTGGCCAAGGGCAGTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp GAAGAGGGGGATGCCCCAGCTGTTGATGGCCAGTGCGATGATCAGGACTCCAATTATTGGAGGATGACTTaGTGCCAGGCGTCATATTCT +
Preference number: 5 (lower is better)
Translates to: EEGDAPAVDGQCDDQDSNYWRMT*CQASYS
Trigger: AGAATATGACGCCTGGCACAAAGTCATCCTCCAATA...ATTGGAGTCCTGATCATCGCACTGGCCATCAACAGCTGGGGCATCCCCCTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp AAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTGTGCCCATTATCAAGCTaGGTCACCTCCTTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: KRLCTHVPFSLWPGAWSLCPLSS*VTSFWG
Trigger: TCCCCAGAAGGAGGTGACCAAGCTTGATAATGGGCA...CAAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp CAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTACCATGCTCTCCCCCTaGGCATTGGGAAAAGCCAAA +
Preference number: 5 (lower is better)
Translates to: QEIMYTRAFQPLAWSLELTMLSP*ALGKAK
Trigger: TTTGGCTTTTCCCAATGCCAAGGGGGAGAGCATGGT...AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp ATGATGAACATAATTATGCCGATGAAGATGGCCACTGTCCCATCGGACACCATGTGCAGTGGGGTCAGCTaGTTTCCCAGCCACTCTGAC +
Preference number: 5 (lower is better)
Translates to: MMNIIMPMKMATVPSDTMCSGVS*FPSHSD
Trigger: GTCAGAGTGGCTGGGAAACAAGCTGACCCCACTGCA...CATGGTGTCCGATGGGACAGTGGCCATCTTCATCGGCATAATTATGTTCATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp TGCAGGCGCACACATATGCGCACACACACATGCACACACCTTTTATTCCAGCACGCCATATCCAACACTTaGAGGTCCCCGAAAGAGAAG +
Preference number: 5 (lower is better)
Translates to: CRRTHMRTHTCTHLLFQHAISNT*RSPKEK
Trigger: CTTCTCTTTCGGGGACCTCAAAGTGTTGGATATGGC...GTGCTGGAATAAAAGGTGTGTGCATGTGTGTGTGCGCATATGTGTGCGCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp GACTCCAATGATGTTGAGGAGGAATCCTGCCCGGGCCATATCCAACACTTTGAGGCCATATCCAACACTTaGAGGTCCCCGAAAGAGAAG +
Preference number: 5 (lower is better)
Translates to: DSNDVEEESCPGHIQHFEAISNT*RSPKEK
Trigger: CTTCTCTTTCGGGGACCTCAAAGTGTTGGATATGGC...CTCAAAGTGTTGGATATGGCCCGGGCAGGATTCCTCCTCAACATCATTGGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp GCATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGGACTCCAATGATGTaGAGGAGGAATCCTGCCCGG +
Preference number: 5 (lower is better)
Translates to: AYTPSLQTRKRLCTHVPFRTPMM*RRNPAR
Trigger: CCGGGCAGGATTCCTCCTCAACATCATTGGAGTCCT...GAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp CATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCACGTGCCTTTCAGCCTTaGGCCTGGAGCTTGGAGCTT +
Preference number: 5 (lower is better)
Translates to: HTPLPYRHARDYVHTCLSRAFQP*AWSLEL
Trigger: AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACG...TGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS CCA 90 bp GGTAATAACTATTGTTCACATTTCACAGCTTACTGGGGACGAGGATaGGCAGAGGCAGCAGGAGAATGGGCACGAAGAACACGATCAGGT +
Preference number: 5 (lower is better)
Translates to: GNNYCSHFTAYWGRG*AEAAGEWARRTRSG
Trigger: ACCTGATCGTGTTCTTCGTGCCCATTCTCCTGCTGCCTCTGCCCATCCTCGTCCCCAGTAAGCTGTGAAATGTGAACAATAGTTATTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp GCATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCACCATGCTCTCCCCCTaGGCATTGGGAAAAGCCAAA +
Preference number: 5 (lower is better)
Translates to: AYTPSLQTRKRLCTHVPFTMLSP*ALGKAK
Trigger: TTTGGCTTTTCCCAATGCCAAGGGGGAGAGCATGGT...GAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp CAAGAGATTATGTACACACGTGCCTTTCAGCCTTTGGCCTGGAGCTTGGAGCTTGTCAGCCCTGGGAACTaGGAGGGTATGATGAACATA +
Preference number: 5 (lower is better)
Translates to: QEIMYTRAFQPLAWSLELVSPGN*EGMMNI
Trigger: TATGTTCATCATACCCTCCAAGTTCCCAGGGCTGAC...AAGCTCCAAGCTCCAGGCCAAAGGCTGAAAGGCACGTGTGTACATAATCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp CATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAAGGACTCCAATGATGTaGAGGAGGAATCCTGCCCGG +
Preference number: 5 (lower is better)
Translates to: HTPLPYRHARDYVHTCLSRTPMM*RRNPAR
Trigger: CCGGGCAGGATTCCTCCTCAACATCATTGGAGTCCT...TGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS CCA 90 bp TTTGCTCTCAGAGGTAATAACTATTGTTCACATTTCACAGCTTACTaGGGACGAGGATGGGCAGAGGCAGCAGGAGAATGGGCACGAAGA +
Preference number: 5 (lower is better)
Translates to: FALRGNNYCSHFTAY*GRGWAEAAGEWARR
Trigger: TCTTCGTGCCCATTCTCCTGCTGCCTCTGCCCATCCTCGTCCCCAGTAAGCTGTGAAATGTGAACAATAGTTATTACCTCTGAGAGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp TTGTGCCAGGCGTCATATTCTATGTGCTTCAAATGCTTTTACAAGTTGCATTTACCTTGCAGCACCAGGTaGGGTGCGGTGCCAGTCAGC +
Preference number: 5 (lower is better)
Translates to: LCQASYSMCFKCFYKLHLPCSTR*GAVPVS
Trigger: GCTGACTGGCACCGCACCCAACCTGGTGCTGCAAGG...TAAATGCAACTTGTAAAAGCATTTGAAGCACATAGAATATGACGCCTGGCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS-3UTR CAA 90 bp TCAATAAATACAGTGCAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTGCGAAGTTCACCACGTaGCCGTTTTGGGGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: SINTVQVSLVTKLGIPRPAKFTT*PFWGKS
Trigger: GCTCTTCCCCCAAAACGGCAACGTGGTGAACTTCGC...AGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTGCACTGTATTTATTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp GCATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAAGTTCTTCCGGAAGTaGAAGCCCAGGAAGAGGATC +
Preference number: 5 (lower is better)
Translates to: AYTPSLQTRKRLCTHVPFKFFRK*KPRKRI
Trigger: GATCCTCTTCCTGGGCTTCAACTTCCGGAAGAACTT...GAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS TCA 90 bp AAGATGCAGCCAAGCAGGCAGGTGGCAGGCTTATATAAAGCCAGTTaGGTGTTAACCATTGACCCAGTCTGGCAATCAGAGTGTTTTTGG +
Preference number: 5 (lower is better)
Translates to: KMQPSRQVAGLYKAS*VLTIDPVWQSECFW
Trigger: CCAAAAACACTCTGATTGCCAGACTGGGTCAATGGTTAACACTCAACTGGCTTTATATAAGCCTGCCACCTGCCTGCTTGGCTGCATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444914.7
CDS-3UTR CAA 90 bp CATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAAAGTTCTTCCGGAAGTaGAAGCCCAGGAAGAGGATC +
Preference number: 5 (lower is better)
Translates to: HTPLPYRHARDYVHTCLSKFFRK*KPRKRI
Trigger: GATCCTCTTCCTGGGCTTCAACTTCCGGAAGAACTT...TGAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp GCATACACCCCTTCCTTACAGACACGCAAGAGATTATGTACACACGTGCCTTTCAGAGGGCATGTTGTATaGTCTGTGAACACACACGTG +
Preference number: 5 (lower is better)
Translates to: AYTPSLQTRKRLCTHVPFRGHVV*SVNTHV
Trigger: CACGTGTGTGTTCACAGACAATACAACATGCCCTCT...GAAAGGCACGTGTGTACATAATCTCTTGCGTGTCTGTAAGGAAGGGGTGTATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp TCAATAAATACAGTGCAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTAAGTTCTTCCGGAAGTaGAAGCCCAGGAAGAGGATC +
Preference number: 5 (lower is better)
Translates to: SINTVQVSLVTKLGIPRPKFFRK*KPRKRI
Trigger: GATCCTCTTCCTGGGCTTCAACTTCCGGAAGAACTT...AGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTGCACTGTATTTATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp TCAATAAATACAGTGCAAGTAAGTCTGGTCACTAAGCTGGGGATACCAAGACCTGTCAGCCCTGGGAACTaGGAGGGTATGATGAACATA +
Preference number: 5 (lower is better)
Translates to: SINTVQVSLVTKLGIPRPVSPGN*EGMMNI
Trigger: TATGTTCATCATACCCTCCAAGTTCCCAGGGCTGAC...AGGTCTTGGTATCCCCAGCTTAGTGACCAGACTTACTTGCACTGTATTTATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000459818.2
ENST00000579281.5
CDS-3UTR CAA 90 bp TTGTGCCAGGCGTCATATTCTATGTGCTTCAAATGCTTTTACAAGTTGCATTTATGCAGTGGGGTCAGCTaGTTTCCCAGCCACTCTGAC +
Preference number: 5 (lower is better)
Translates to: LCQASYSMCFKCFYKLHLCSGVS*FPSHSD
Trigger: GTCAGAGTGGCTGGGAAACAAGCTGACCCCACTGCA...TAAATGCAACTTGTAAAAGCATTTGAAGCACATAGAATATGACGCCTGGCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS TCA 72 bp TCCCACGGTGCCCCCGAGGTTATGGGATGCAGTCACTaGCATTCCCACAGACTGGCATTCCCCTGGGCTCTC +
Preference number: 6 (lower is better)
Translates to: SHGAPEVMGCSH*HSHRLAFPWAL
Trigger: GAGAGCCCAGGGGAATGCCAGTCTGTGGGAATGTCAGTGACTGCATCCCATAACCTCGGGGGCACCGTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444914.7
CDS CCA 72 bp CATACGCGCAGTAGGCCTCCTTACTGGGGACGAGGATaGGCAGAGGCAGCAGGAGAATGGGCACGAAGAACA +
Preference number: 6 (lower is better)
Translates to: HTRSRPPYWGRG*AEAAGEWARRT
Trigger: TGTTCTTCGTGCCCATTCTCCTGCTGCCTCTGCCCATCCTCGTCCCCAGTAAGGAGGCCTACTGCGCGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314669.10
ENST00000444914.7
ENST00000545060.2
CDS CCA 72 bp AGGAGGTTGGAGTCCTTAAGATACTCGACGGCAACCTaGCAGGTGGAGACATGGCTGAGCGGCGGGAAGACC +
Preference number: 6 (lower is better)
Translates to: RRLESLRYSTAT*QVETWLSGGKT
Trigger: GGTCTTCCCGCCGCTCAGCCATGTCTCCACCTGCCAGGTTGCCGTCGAGTATCTTAAGGACTCCAACCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444914.7
CDS CCA 72 bp AAGACCCTGGAGTCTCCCACGGTGCCCCCGAGGTTATaGGATGCAGTCACTGACATTCCCACAGACTGGCAT +
Preference number: 6 (lower is better)
Translates to: KTLESPTVPPRL*DAVTDIPTDWH
Trigger: ATGCCAGTCTGTGGGAATGTCAGTGACTGCATCCCATAACCTCGGGGGCACCGTGGGAGACTCCAGGGTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444914.7
CDS CCA 72 bp TATTGTTCACATTTCACAGCTTACTGGGGACGAGGATaGGCAGAGGCAGCAGGAGAATGGGCACGAAGAACA +
Preference number: 6 (lower is better)
Translates to: YCSHFTAYWGRG*AEAAGEWARRT
Trigger: TGTTCTTCGTGCCCATTCTCCTGCTGCCTCTGCCCATCCTCGTCCCCAGTAAGCTGTGAAATGTGAACAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5
CDS TCA 72 bp CCAAGCAGGCAGGTGGCAGGCTTATATAAAGCCAGTTaGGTGTTAACCATTGACCCAGTCTGGCAATCAGAG +
Preference number: 6 (lower is better)
Translates to: PSRQVAGLYKAS*VLTIDPVWQSE
Trigger: CTCTGATTGCCAGACTGGGTCAATGGTTAACACTCAACTGGCTTTATATAAGCCTGCCACCTGCCTGCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444914.7
CDS CAA 90 bp TTGTGCCAGGCGTCATATTCTATGTGCTTCAAATGCTTTTACAAGTaGCATTTATTTGCTCTCAGAGGTAATAACTATTGTTCACATTTC +
Preference number: 6 (lower is better)
Translates to: LCQASYSMCFKCFYK*HLFALRGNNYCSHF
Trigger: GAAATGTGAACAATAGTTATTACCTCTGAGAGCAAATAAATGCAACTTGTAAAAGCATTTGAAGCACATAGAATATGACGCCTGGCACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459818.2
ENST00000577903.5
ENST00000579281.5