RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC12A8 (Homo sapiens)

Ensembl gene IDs: ENSG00000221955

Ensembl transcript IDs: ENST00000393469.8, ENST00000430155.6, ENST00000461616.1, ENST00000462437.1, ENST00000465475.5, ENST00000465777.5, ENST00000469902.6, ENST00000473262.5, ENST00000479231.1, ENST00000479352.5, ENST00000479826.1, ENST00000481760.2, ENST00000483944.5, ENST00000485849.1, ENST00000485954.5, ENST00000495105.5

Found 630 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGCAAGTGCAGGGATCACTTTCTCCTGGGCAATGCACTGCAGGATaGGGGGAGCTCCATAAAGTCCTCCCATGCAGGAAGCCAGGGACG +
Preference number: 1 (lower is better)
Translates to: RQVQGSLSPGQCTAG*GELHKVLPCRKPGT
Trigger: CGTCCCTGGCTTCCTGCATGGGAGGACTTTATGGAGCTCCCCGCATCCTGCAGTGCATTGCCCAGGAGAAAGTGATCCCTGCACTTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR CCA 90 bp GCGTGCCCTCCAAGACTCTTTGGGCAGGTCCCTCAGAGCCGTAACTaGGAGCTTTCTCTAAGAGCAGGTGCTCAGAGCAGTGGAGGCCTT +
Preference number: 1 (lower is better)
Translates to: ACPPRLFGQVPQSRN*ELSLRAGAQSSGGL
Trigger: AAGGCCTCCACTGCTCTGAGCACCTGCTCTTAGAGAAAGCTCCCAGTTACGGCTCTGAGGGACCTGCCCAAAGAGTCTTGGAGGGCACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR GCA 90 bp ATGTACAGAAACCACCCAATGAAGGGCAGAGAAGCTTCTTCGAGATaGCAACAGCTGCCAGGGAGCCCAGGGGAATGCTGGCGGCAGGCT +
Preference number: 1 (lower is better)
Translates to: MYRNHPMKGREASSR*QQLPGSPGECWRQA
Trigger: AGCCTGCCGCCAGCATTCCCCTGGGCTCCCTGGCAGCTGTTGGCATCTCGAAGAAGCTTCTCTGCCCTTCATTGGGTGGTTTCTGTACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR GCA 90 bp GTTCACGAGGGAGGAGTGGTGGTAGCGATCCCGAGTGGCGAAGTCTaGATTCTCCTGGGTGAGCTGAGTCATCTCCATGTCAACCTTAGC +
Preference number: 1 (lower is better)
Translates to: VHEGGVVVAIPSGEV*ILLGELSHLHVNLS
Trigger: GCTAAGGTTGACATGGAGATGACTCAGCTCACCCAGGAGAATGCAGACTTCGCCACTCGGGATCGCTACCACCACTCCTCCCTCGTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR TCA 90 bp TGCCTGGGCTGGCTACTCTCAAGCTTCCTGGTTAGCTGGAGGAGCTaGTCCATGTCCTTGGTGAATTCCAGTAGCGTGCCCTCCAAGACT +
Preference number: 1 (lower is better)
Translates to: CLGWLLSSFLVSWRS*SMSLVNSSSVPSKT
Trigger: AGTCTTGGAGGGCACGCTACTGGAATTCACCAAGGACATGGATCAGCTCCTCCAGCTAACCAGGAAGCTTGAGAGTAGCCAGCCCAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR GCA 90 bp GGGCAATGCACTGCAGGATGCGGGGAGCTCCATAAAGTCCTCCCATaGAGGAAGCCAGGGACGAGATGTATAAGCCCAAAAGGAACAGGA +
Preference number: 1 (lower is better)
Translates to: GQCTAGCGELHKVLP*RKPGTRCISPKGTG
Trigger: TCCTGTTCCTTTTGGGCTTATACATCTCGTCCCTGGCTTCCTGCATGGGAGGACTTTATGGAGCTCCCCGCATCCTGCAGTGCATTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR TCA 90 bp TTGCACAGCTCAGGAACAAGTTGCTCTCCATATGTTCCCTCAGGCTaGGTCCCTTCGCTCTTGGAAGTCTGCTTGTTCCAGCAGGACTCC +
Preference number: 1 (lower is better)
Translates to: LHSSGTSCSPYVPSG*VPSLLEVCLFQQDS
Trigger: GGAGTCCTGCTGGAACAAGCAGACTTCCAAGAGCGAAGGGACTCAGCCTGAGGGAACATATGGAGAGCAACTTGTTCCTGAGCTGTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR GCA 90 bp CAGGCTGCAGGAACACATGGACAGGGAGAAGTAAGAGTAGTCCACTaGAACGTATGTCAGCATGAAGTTGATGGTGACGATGGGGGCCAG +
Preference number: 1 (lower is better)
Translates to: QAAGTHGQGEVRVVH*NVCQHEVDGDDGGQ
Trigger: CTGGCCCCCATCGTCACCATCAACTTCATGCTGACATACGTTGCAGTGGACTACTCTTACTTCTCCCTGTCCATGTGTTCCTGCAGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR CCA 90 bp CCAACAGGGAGACCCAGGGGTTGCACATGTGGGTATAGAAAGAAGTaGATCTTCTCCAGACATCTTGTTCTTGGAGCCTGGACTTCAGGA +
Preference number: 1 (lower is better)
Translates to: PTGRPRGCTCGYRKK*IFSRHLVLGAWTSG
Trigger: TCCTGAAGTCCAGGCTCCAAGAACAAGATGTCTGGAGAAGATCCACTTCTTTCTATACCCACATGTGCAACCCCTGGGTCTCCCTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR GCA 90 bp CTAGAGATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTaGAGAGCTGATTGTCATTGCAAAAGATTGGAAAGAATCCAAATG +
Preference number: 1 (lower is better)
Translates to: LEIHFMLAHLYKIIH*RADCHCKRLERIQM
Trigger: CATTTGGATTCTTTCCAATCTTTTGCAATGACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTATCTCTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
3UTR-3UTR TCA 90 bp CTAGTAGTGAGGCATCAGCTGCTCCCGGTTCACGAGGGAGGAGTGGTGGTAGCGGAGGCTGATCCAAGGTaGAGCCCTGGACTGGCCCGG +
Preference number: 2 (lower is better)
Translates to: LVVRHQLLPVHEGGVVVAEADPR*SPGLAR
Trigger: CCGGGCCAGTCCAGGGCTTCACCTTGGATCAGCCTC...CGCTACCACCACTCCTCCCTCGTGAACCGGGAGCAGCTGATGCCTCACTACTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR CCA 90 bp CTAGTAGTGAGGCATCAGCTGCTCCCGGTTCACGAGGGAGGAGTGGTGGTAGCGAGGTGCTCAGAGCAGTaGAGGCCTTCTGCGCCCTCC +
Preference number: 2 (lower is better)
Translates to: LVVRHQLLPVHEGGVVVARCSEQ*RPSAPS
Trigger: GGAGGGCGCAGAAGGCCTCCACTGCTCTGAGCACCT...CGCTACCACCACTCCTCCCTCGTGAACCGGGAGCAGCTGATGCCTCACTACTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR TCA 90 bp CCTGGGCAATGCACTGCAGGATGCGGGGAGCTCCATAAAGTCCTCCCATGCAGGGCTCCACGAAGGTCCTaGGCTTGGGTCCACTGTACA +
Preference number: 2 (lower is better)
Translates to: PGQCTAGCGELHKVLPCRAPRRS*AWVHCT
Trigger: TGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGC...CCTGCATGGGAGGACTTTATGGAGCTCCCCGCATCCTGCAGTGCATTGCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR GCA 90 bp CTCCCAGGAGGCAGCGGGCAACCTGTCAGAGATCTCGACAGGGAAAGAAGGAGGGAAGCTTCTTCGAGATaGCAACAGCTGCCAGGGAGC +
Preference number: 2 (lower is better)
Translates to: LPGGSGQPVRDLDRERRREASSR*QQLPGS
Trigger: GCTCCCTGGCAGCTGTTGGCATCTCGAAGAAGCTTC...CCTCCTTCTTTCCCTGTCGAGATCTCTGACAGGTTGCCCGCTGCCTCCTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR GCA 90 bp TTCCCTCAGGCTGAGTCCCTTCGCTCTTGGAAGTCTGCTTGTTCCAGCAGGACTGCACCGGGGTCAGGCTaGAGGAACACATGGACAGGG +
Preference number: 2 (lower is better)
Translates to: FPQAESLRSWKSACSSRTAPGSG*RNTWTG
Trigger: CCCTGTCCATGTGTTCCTGCAGCCTGACCCCGGTGC...AGTCCTGCTGGAACAAGCAGACTTCCAAGAGCGAAGGGACTCAGCCTGAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR CCA 90 bp TGGAGGCTGATCCAAGGTGAAGCCCTGGACTGGCCCGGCCAATGTAGAAATACACCTCTCGAGTGCAGATaGCGCCCAGGAGGAAGACGA +
Preference number: 2 (lower is better)
Translates to: WRLIQGEALDWPGQCRNTPLECR*RPGGRR
Trigger: TCGTCTTCCTCCTGGGCGCCATCTGCACTCGAGAGG...TGTATTTCTACATTGGCCGGGCCAGTCCAGGGCTTCACCTTGGATCAGCCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR TCA 90 bp AGTGCAGGGATCACTTTCTCCTGGGCAATGCACTGCAGGATGCGGGGAGCTCCATTCCATTGTCCAAAGTaGCAGCGGGAGGATGGGTCT +
Preference number: 2 (lower is better)
Translates to: SAGITFSWAMHCRMRGAPFHCPK*QREDGS
Trigger: AGACCCATCCTCCCGCTGTCACTTTGGACAATGGAA...TGGAGCTCCCCGCATCCTGCAGTGCATTGCCCAGGAGAAAGTGATCCCTGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR TCA 90 bp CTCCCAGGAGGCAGCGGGCAACCTGTCAGAGATCTCGACAGGGAAAGAAGGAGGGTTAGCTGGAGGAGCTaGTCCATGTCCTTGGTGAAT +
Preference number: 2 (lower is better)
Translates to: LPGGSGQPVRDLDRERRRVSWRS*SMSLVN
Trigger: ATTCACCAAGGACATGGATCAGCTCCTCCAGCTAAC...CCTCCTTCTTTCCCTGTCGAGATCTCTGACAGGTTGCCCGCTGCCTCCTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR GCA 90 bp CTGCATCTAGTAGTGAGGCATCAGCTGCTCCCGGTTCACGAGGGAGGAGTGGTGTTCTCTAAGAGCAGGTaGTCAGAGCAGTGGAGGCCT +
Preference number: 2 (lower is better)
Translates to: LHLVVRHQLLPVHEGGVVFSKSR*SEQWRP
Trigger: AGGCCTCCACTGCTCTGAGCACCTGCTCTTAGAGAA...CACCACTCCTCCCTCGTGAACCGGGAGCAGCTGATGCCTCACTACTAGATGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR CCA 90 bp GCGATCCCGAGTGGCGAAGTCTGCATTCTCCTGGGTGAGCTGAGTCATCTCCATGGTGAAGCCCTGGACTaGCCCGGCCAATGTAGAAAT +
Preference number: 2 (lower is better)
Translates to: AIPSGEVCILLGELSHLHGEALD*PGQCRN
Trigger: ATTTCTACATTGGCCGGGCCAGTCCAGGGCTTCACC...ATGGAGATGACTCAGCTCACCCAGGAGAATGCAGACTTCGCCACTCGGGATCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR CAA 90 bp GCGGGCAACCTGTCAGAGATCTCGACAGGGAAAGAAGGAGGGGATTaGAGGTCCAAGAGGAAGCTATCTTGTAGGGTCTGCTTGGTGGCC +
Preference number: 2 (lower is better)
Translates to: AGNLSEISTGKEGGD*RSKRKLSCRVCLVA
Trigger: GGCCACCAAGCAGACCCTACAAGATAGCTTCCTCTTGGACCTCAAATCCCCTCCTTCTTTCCCTGTCGAGATCTCTGACAGGTTGCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR TCA 90 bp GAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCCGGGAGGATGGGTCTTaGGTTTCTCAGGTTGGAGAA +
Preference number: 2 (lower is better)
Translates to: EASTIPDVTLGETWSSESREDGS*VSQVGE
Trigger: TTCTCCAACCTGAGAAACTCAAGACCCATCCTCCCG...GGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR-3UTR TCA 90 bp GAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCTTCCATTGTCCAAAGTaGCAGCGGGAGGATGGGTCT +
Preference number: 2 (lower is better)
Translates to: EASTIPDVTLGETWSSESFHCPK*QREDGS
Trigger: AGACCCATCCTCCCGCTGTCACTTTGGACAATGGAA...GGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR-3UTR CCA 90 bp GAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCGTAATCCCAGTACTTTaGGAGGCTGAGACGGGTGGA +
Preference number: 2 (lower is better)
Translates to: EASTIPDVTLGETWSSESVIPVL*EAETGG
Trigger: TCCACCCGTCTCAGCCTCCCAAAGTACTGGGATTAC...GGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR-3UTR CCA 90 bp CAGGCTGAGTCCCTTCGCTCTTGGAAGTCTGCTTGTTCCAGCAGGACTCCTGCCCAGGAACTGAGCAGGTaGAGAATAAGGATTGGAGGG +
Preference number: 2 (lower is better)
Translates to: QAESLRSWKSACSSRTPAQELSR*RIRIGG
Trigger: CCCTCCAATCCTTATTCTCCACCTGCTCAGTTCCTG...GGCAGGAGTCCTGCTGGAACAAGCAGACTTCCAAGAGCGAAGGGACTCAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR CCA 90 bp GGTGTCGTGTTGCAGAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGACTCCTGTAGCCGCTaGGAAGAAAACCCCAAAGAC +
Preference number: 2 (lower is better)
Translates to: GVVLQRLAPFLMSPWVRRDSCSR*EENPKD
Trigger: GTCTTTGGGGTTTTCTTCCCAGCGGCTACAGGAGTC...ACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTGCAACACGACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR CCA 90 bp GGTGAGCTGAGTCATCTCCATGTCAACCTTAGCCAGGGACGGCGCCAAGATGATCACGGGTGTTTTGTTTaGCCCCTTCCCTTGTCCCAG +
Preference number: 2 (lower is better)
Translates to: GELSHLHVNLSQGRRQDDHGCFV*PLPLSQ
Trigger: CTGGGACAAGGGAAGGGGCCAAACAAAACACCCGTG...ATCATCTTGGCGCCGTCCCTGGCTAAGGTTGACATGGAGATGACTCAGCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR CCA 90 bp CTGCATCTAGTAGTGAGGCATCAGCTGCTCCCGGTTCACGAGGGAGGAGTGGTGCAAAAACAAAGGCCATaGTCACCAAGCTGGTCAGGC +
Preference number: 2 (lower is better)
Translates to: LHLVVRHQLLPVHEGGVVQKQRP*SPSWSG
Trigger: GCCTGACCAGCTTGGTGACCATGGCCTTTGTTTTTG...CACCACTCCTCCCTCGTGAACCGGGAGCAGCTGATGCCTCACTACTAGATGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR CCA 90 bp CTAGTAGTGAGGCATCAGCTGCTCCCGGTTCACGAGGGAGGAGTGGTGGTAGCGCAGACATCTTGTTCTTaGAGCCTGGACTTCAGGAAG +
Preference number: 2 (lower is better)
Translates to: LVVRHQLLPVHEGGVVVAQTSCS*SLDFRK
Trigger: CTTCCTGAAGTCCAGGCTCCAAGAACAAGATGTCTG...CGCTACCACCACTCCTCCCTCGTGAACCGGGAGCAGCTGATGCCTCACTACTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR TCA 90 bp CAGAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATGGCAGGAGAATTGCTTaGACTCGGGAAGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: QRLAPFLMSPWVRRGPQNGRRIA*TREAEV
Trigger: AACCTCTGCTTCCCGAGTTCAAGCAATTCTCCTGCC...ATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR-3UTR GCA 90 bp GGTGTCGTGTTGCAGAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTCTGAGGCAGGAGAATTaGTTGAACTCGGGAAGCAGA +
Preference number: 2 (lower is better)
Translates to: GVVLQRLAPFLMSPWVRRLRQEN*LNSGSR
Trigger: TCTGCTTCCCGAGTTCAAGCAATTCTCCTGCCTCAG...ACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTGCAACACGACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR-3UTR CCA 90 bp CTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCAGATTTCCTGATGTCACCCTaGGTGAGACGTGGTCCTCAG +
Preference number: 2 (lower is better)
Translates to: LAPFLMSPWVRRGPQNPDFLMSP*VRRGPQ
Trigger: CTGAGGACCACGTCTCACCCAGGGTGACATCAGGAA...ATCTGGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR-3UTR CCA 90 bp CCTGGGCAATGCACTGCAGGATGCGGGGAGCTCCATAAAGTCCTCCCATGCAGGAATGAAACCATGTTCTaGGTCCAGGTGGGTGAAAGA +
Preference number: 2 (lower is better)
Translates to: PGQCTAGCGELHKVLPCRNETMF*VQVGER
Trigger: TCTTTCACCCACCTGGACCCAGAACATGGTTTCATT...CCTGCATGGGAGGACTTTATGGAGCTCCCCGCATCCTGCAGTGCATTGCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR CCA 90 bp TTCCCTCAGGCTGAGTCCCTTCGCTCTTGGAAGTCTGCTTGTTCCAGCAGGACTGGGATCACTTTCTCCTaGGCAATGCACTGCAGGATG +
Preference number: 2 (lower is better)
Translates to: FPQAESLRSWKSACSSRTGITFS*AMHCRM
Trigger: CATCCTGCAGTGCATTGCCCAGGAGAAAGTGATCCC...AGTCCTGCTGGAACAAGCAGACTTCCAAGAGCGAAGGGACTCAGCCTGAGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR CCA 90 bp GGTGAGCTGAGTCATCTCCATGTCAACCTTAGCCAGGGACGGCGCCAAGATGATGAGTCCCTTCGCTCTTaGAAGTCTGCTTGTTCCAGC +
Preference number: 2 (lower is better)
Translates to: GELSHLHVNLSQGRRQDDESLRS*KSACSS
Trigger: GCTGGAACAAGCAGACTTCCAAGAGCGAAGGGACTC...ATCATCTTGGCGCCGTCCCTGGCTAAGGTTGACATGGAGATGACTCAGCTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR CAA 90 bp TTGAGTTTCTCAGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTaGGGTCCACTGTACATGGGACAGCTCCAAAAGAGGAAGGTCCCA +
Preference number: 2 (lower is better)
Translates to: LSFSGWRSSSTKVLS*GPLYMGQLQKRKVP
Trigger: TGGGACCTTCCTCTTTTGGAGCTGTCCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCTGAGAAACTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR-3UTR TCA 90 bp TCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGTTGGCTCCACGAAGGTCCTaGGCTTGGGTCCACTGTACA +
Preference number: 2 (lower is better)
Translates to: SPASLSTCIELFRLGVVLAPRRS*AWVHCT
Trigger: TGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGC...CAACACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR-3UTR TCA 90 bp AGAGCTCTTCAGACTGGGTGTCGTGTTGCAGAGGCTAGCACCATTCCTGATGTCCGGGAGGATGGGTCTTaGGTTTCTCAGGTTGGAGAA +
Preference number: 2 (lower is better)
Translates to: RALQTGCRVAEASTIPDVREDGS*VSQVGE
Trigger: TTCTCCAACCTGAGAAACTCAAGACCCATCCTCCCG...GACATCAGGAATGGTGCTAGCCTCTGCAACACGACACCCAGTCTGAAGAGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR-3UTR GCA 90 bp AGAGCTCTTCAGACTGGGTGTCGTGTTGCAGAGGCTAGCACCATTCCTGATGTCCAATGCACTGCAGGATaGGGGGAGCTCCATAAAGTC +
Preference number: 2 (lower is better)
Translates to: RALQTGCRVAEASTIPDVQCTAG*GELHKV
Trigger: GACTTTATGGAGCTCCCCGCATCCTGCAGTGCATTG...GACATCAGGAATGGTGCTAGCCTCTGCAACACGACACCCAGTCTGAAGAGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR CCA 90 bp CCGAGTGGCGAAGTCTGCATTCTCCTGGGTGAGCTGAGTCATCTCCATGTCAACTGGGTCCACTGTACATaGGACAGCTCCAAAAGAGGA +
Preference number: 2 (lower is better)
Translates to: PSGEVCILLGELSHLHVNWVHCT*DSSKRG
Trigger: TCCTCTTTTGGAGCTGTCCCATGTACAGTGGACCCA...GTTGACATGGAGATGACTCAGCTCACCCAGGAGAATGCAGACTTCGCCACTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR CCA 90 bp CCTCTGCACAAGCAATCTGGTTGTGCAGAGTCTTGGTGTCCCCTGCTAGTCTTATTCCTGATGTCACCCTaGGTGAGACGTGGTCCTCAG +
Preference number: 2 (lower is better)
Translates to: PLHKQSGCAESWCPLLVLFLMSP*VRRGPQ
Trigger: CTGAGGACCACGTCTCACCCAGGGTGACATCAGGAA...TAAGACTAGCAGGGGACACCAAGACTCTGCACAACCAGATTGCTTGTGCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR-3UTR CCA 90 bp GTGTCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGTTCCTGATGTCACCCTaGGTGAGACGTGGTCCTCAG +
Preference number: 2 (lower is better)
Translates to: VSPASLSTCIELFRLGVVFLMSP*VRRGPQ
Trigger: CTGAGGACCACGTCTCACCCAGGGTGACATCAGGAA...CACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR CAA 90 bp GCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGTaGCAGAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGT +
Preference number: 2 (lower is better)
Translates to: ASLSTCIELFRLGVV*QRLAPFLMSPWVRR
Trigger: ACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTGCAACACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR-3UTR TCA 90 bp CCTCTGCACAAGCAATCTGGTTGTGCAGAGTCTTGGTGTCCCCTGCTAGTCTTAGGAACAGGAAGCCCATaGGGGATACCTTTTCCGCTA +
Preference number: 2 (lower is better)
Translates to: PLHKQSGCAESWCPLLVLGTGSP*GIPFPL
Trigger: TAGCGGAAAAGGTATCCCTCATGGGCTTCCTGTTCC...TAAGACTAGCAGGGGACACCAAGACTCTGCACAACCAGATTGCTTGTGCAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR CCA 90 bp GTGTCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGGTAATCCCAGTACTTTaGGAGGCTGAGACGGGTGGA +
Preference number: 2 (lower is better)
Translates to: VSPASLSTCIELFRLGVVVIPVL*EAETGG
Trigger: TCCACCCGTCTCAGCCTCCCAAAGTACTGGGATTAC...CACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR-3UTR CCA 90 bp CTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCAGATGGTTGTGCAGAGTCTTaGTGTCCCCTGCTAGTCTTA +
Preference number: 2 (lower is better)
Translates to: LAPFLMSPWVRRGPQNPDGCAES*CPLLVL
Trigger: TAAGACTAGCAGGGGACACCAAGACTCTGCACAACC...ATCTGGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR-3UTR CCA 90 bp CACTGTATCACAAACATGATGAGAAGGGACCCAACAGCCCCCAACAGGGAGACCCTTGTAGGGTCTGCTTaGTGGCCTTCTTGCTTTTCC +
Preference number: 2 (lower is better)
Translates to: HCITNMMRRDPTAPNRETLVGSA*WPSCFS
Trigger: GGAAAAGCAAGAAGGCCACCAAGCAGACCCTACAAG...GGTCTCCCTGTTGGGGGCTGTTGGGTCCCTTCTCATCATGTTTGTGATACAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR TCA 90 bp TCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGTTGTTCCATTGTCCAAAGTaGCAGCGGGAGGATGGGTCT +
Preference number: 2 (lower is better)
Translates to: SPASLSTCIELFRLGVVLFHCPK*QREDGS
Trigger: AGACCCATCCTCCCGCTGTCACTTTGGACAATGGAA...CAACACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR-3UTR TCA 90 bp TCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGTTGGGCAGGAGAATTGCTTaGACTCGGGAAGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: SPASLSTCIELFRLGVVLGRRIA*TREAEV
Trigger: AACCTCTGCTTCCCGAGTTCAAGCAATTCTCCTGCC...CAACACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR-3UTR CCA 90 bp TCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGTTGGTAATCCCAGTACTTTaGGAGGCTGAGACGGGTGGA +
Preference number: 2 (lower is better)
Translates to: SPASLSTCIELFRLGVVLVIPVL*EAETGG
Trigger: TCCACCCGTCTCAGCCTCCCAAAGTACTGGGATTAC...CAACACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR CAA 90 bp AAATGTAGATTTCCATTGTCCAAAGTGACAGCGGGAGGATGGGTCTaGAGTTTCTCAGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGC +
Preference number: 2 (lower is better)
Translates to: KCRFPLSKVTAGGWV*SFSGWRSSSTKVLS
Trigger: GCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCTGAGAAACTCAAGACCCATCCTCCCGCTGTCACTTTGGACAATGGAAATCTACATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR-3UTR GCA 90 bp CAAGCAATCTGGTTGTGCAGAGTCTTGGTGTCCCCTGCTAGTCTTAGTACCTGTCTGAGGCAGGAGAATTaGTTGAACTCGGGAAGCAGA +
Preference number: 2 (lower is better)
Translates to: QAIWLCRVLVSPASLSTCLRQEN*LNSGSR
Trigger: TCTGCTTCCCGAGTTCAAGCAATTCTCCTGCCTCAG...ACAGGTACTAAGACTAGCAGGGGACACCAAGACTCTGCACAACCAGATTGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR-3UTR TCA 90 bp TTCTCCAGACATCTTGTTCTTGGAGCCTGGACTTCAGGAAGAAATCTTCTCCACGGCAGGAGAATTGCTTaGACTCGGGAAGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: FSRHLVLGAWTSGRNLLHGRRIA*TREAEV
Trigger: AACCTCTGCTTCCCGAGTTCAAGCAATTCTCCTGCC...GTGGAGAAGATTTCTTCCTGAAGTCCAGGCTCCAAGAACAAGATGTCTGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR TCA 90 bp CCCAAAAGGAACAGGAAGCCCATGAGGGATACCTTTTCCGCTATCAGGAAGTCAGGAGGAAGACGAAGATaGTGTACAGAAACCACCCAA +
Preference number: 2 (lower is better)
Translates to: PKRNRKPMRDTFSAIRKSGGRRR*CTETTQ
Trigger: TTGGGTGGTTTCTGTACATCATCTTCGTCTTCCTCC...TGACTTCCTGATAGCGGAAAAGGTATCCCTCATGGGCTTCCTGTTCCTTTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR TCA 90 bp GTTAACCAGGGTATACACCCACTGTATCACAAACATGATGAGAAGGGACCCAACGATCCATGTCCTTGGTaGATTCCAGTAGCGTGCCCT +
Preference number: 2 (lower is better)
Translates to: VNQGIHPLYHKHDEKGPNDPCPW*IPVACP
Trigger: AGGGCACGCTACTGGAATTCACCAAGGACATGGATC...GTTGGGTCCCTTCTCATCATGTTTGTGATACAGTGGGTGTATACCCTGGTTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR TCA 90 bp GTTAACCAGGGTATACACCCACTGTATCACAAACATGATGAGAAGGGACCCAACTTCTCCACTGGACTCTaGTTGGTTGCACAGCTCAGG +
Preference number: 2 (lower is better)
Translates to: VNQGIHPLYHKHDEKGPNFSTGL*LVAQLR
Trigger: CCTGAGCTGTGCAACCAATCAGAGTCCAGTGGAGAA...GTTGGGTCCCTTCTCATCATGTTTGTGATACAGTGGGTGTATACCCTGGTTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR GCA 90 bp GAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCTACAAGATTATTCACTaGAGAGCTGATTGTCATTGC +
Preference number: 2 (lower is better)
Translates to: EASTIPDVTLGETWSSESYKIIH*RADCHC
Trigger: GCAATGACAATCAGCTCTGCAGTGAATAATCTTGTA...GGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
3UTR-3UTR GCA 90 bp GTTAACCAGGGTATACACCCACTGTATCACAAACATGATGAGAAGGGACCCAACGGGAGACCCAGGGGTTaGACATGTGGGTATAGAAAG +
Preference number: 2 (lower is better)
Translates to: VNQGIHPLYHKHDEKGPNGRPRG*TCGYRK
Trigger: CTTTCTATACCCACATGTGCAACCCCTGGGTCTCCC...GTTGGGTCCCTTCTCATCATGTTTGTGATACAGTGGGTGTATACCCTGGTTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR CCA 90 bp AGAGCTCTTCAGACTGGGTGTCGTGTTGCAGAGGCTAGCACCATTCCTGATGTCAACATACACTTATTGTaGCCCTCTGCACAAGCAATC +
Preference number: 2 (lower is better)
Translates to: RALQTGCRVAEASTIPDVNIHLL*PSAQAI
Trigger: GATTGCTTGTGCAGAGGGCCACAATAAGTGTATGTT...GACATCAGGAATGGTGCTAGCCTCTGCAACACGACACCCAGTCTGAAGAGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR-3UTR CCA 90 bp CTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCAGATGTGGAGAATAAGGATTaGAGGGAGACTTTTCACTCT +
Preference number: 2 (lower is better)
Translates to: LAPFLMSPWVRRGPQNPDVENKD*RETFHS
Trigger: AGAGTGAAAAGTCTCCCTCCAATCCTTATTCTCCAC...ATCTGGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR-3UTR CCA 90 bp GGTGAGCTGAGTCATCTCCATGTCAACCTTAGCCAGGGACGGCGCCAAGATGATGGGTATAGAAAGAAGTaGATCTTCTCCAGACATCTT +
Preference number: 2 (lower is better)
Translates to: GELSHLHVNLSQGRRQDDGYRKK*IFSRHL
Trigger: AAGATGTCTGGAGAAGATCCACTTCTTTCTATACCC...ATCATCTTGGCGCCGTCCCTGGCTAAGGTTGACATGGAGATGACTCAGCTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR GCA 90 bp TTCAGGAAGAAATCTTCTCCACTGGACTCTGATTGGTTGCACAGCTCAGGAACACTGAGGCAGGAGAATTaGTTGAACTCGGGAAGCAGA +
Preference number: 2 (lower is better)
Translates to: FRKKSSPLDSDWLHSSGTLRQEN*LNSGSR
Trigger: TCTGCTTCCCGAGTTCAAGCAATTCTCCTGCCTCAG...TGTTCCTGAGCTGTGCAACCAATCAGAGTCCAGTGGAGAAGATTTCTTCCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR CCA 90 bp GAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCACTCTATATATCTTTTaGGTGTGGAAACATGTGAGT +
Preference number: 2 (lower is better)
Translates to: EASTIPDVTLGETWSSESTLYIF*VWKHVS
Trigger: ACTCACATGTTTCCACACCCAAAAGATATATAGAGT...GGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR-3UTR TCA 90 bp AGAGCTCTTCAGACTGGGTGTCGTGTTGCAGAGGCTAGCACCATTCCTGATGTCAATGCATGTACCTTTTaGTCCTGCAATTCCACTTTT +
Preference number: 2 (lower is better)
Translates to: RALQTGCRVAEASTIPDVNACTF*SCNSTF
Trigger: AAAAGTGGAATTGCAGGATCAAAAGGTACATGCATT...GACATCAGGAATGGTGCTAGCCTCTGCAACACGACACCCAGTCTGAAGAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
3UTR-3UTR TCA 90 bp GTTAACCAGGGTATACACCCACTGTATCACAAACATGATGAGAAGGGACCCAACACAGAAACCACCCAATaGAGGGCAGAGAAGCTTCTT +
Preference number: 2 (lower is better)
Translates to: VNQGIHPLYHKHDEKGPNTETTQ*RAEKLL
Trigger: AAGAAGCTTCTCTGCCCTTCATTGGGTGGTTTCTGT...GTTGGGTCCCTTCTCATCATGTTTGTGATACAGTGGGTGTATACCCTGGTTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR CCA 90 bp AAACATACACTTATTGTGGCCCTCTGCACAAGCAATCTGGTTGTGCAGAGTCTTTGGGTCCACTGTACATaGGACAGCTCCAAAAGAGGA +
Preference number: 2 (lower is better)
Translates to: KHTLIVALCTSNLVVQSLWVHCT*DSSKRG
Trigger: TCCTCTTTTGGAGCTGTCCCATGTACAGTGGACCCA...AAGACTCTGCACAACCAGATTGCTTGTGCAGAGGGCCACAATAAGTGTATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR-3UTR CCA 90 bp CAGGTGGAGAATAAGGATTGGAGGGAGACTTTTCACTCTATATATCTTTTGGGTAGCTGGTCAGGCAGATaGCAGCCACGGGTGTTTTGT +
Preference number: 2 (lower is better)
Translates to: QVENKDWRETFHSIYLLGSWSGR*QPRVFC
Trigger: ACAAAACACCCGTGGCTGCCATCTGCCTGACCAGCT...ACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCCAATCCTTATTCTCCACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR TCA 90 bp GGAGGGAGACTTTTCACTCTATATATCTTTTGGGTGTGGAAACATGTGAGTGTACTGCATTCTCCTGGGTaGGCTGAGTCATCTCCATGT +
Preference number: 2 (lower is better)
Translates to: GGRLFTLYIFWVWKHVSVLHSPG*AESSPC
Trigger: ACATGGAGATGACTCAGCTCACCCAGGAGAATGCAG...TACACTCACATGTTTCCACACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR GCA 90 bp AAACATACACTTATTGTGGCCCTCTGCACAAGCAATCTGGTTGTGCAGAGTCTTCTTATTGTGGCCCTCTaGACAAGCAATCTGGTTGTG +
Preference number: 2 (lower is better)
Translates to: KHTLIVALCTSNLVVQSLLIVAL*TSNLVV
Trigger: CACAACCAGATTGCTTGTGCAGAGGGCCACAATAAG...AAGACTCTGCACAACCAGATTGCTTGTGCAGAGGGCCACAATAAGTGTATGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR-3UTR TCA 90 bp ATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTGCTCCACGAAGGTCCTaGGCTTGGGTCCACTGTACA +
Preference number: 2 (lower is better)
Translates to: IHFMLAHLYKIIHCRADCAPRRS*AWVHCT
Trigger: TGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGC...ACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
3UTR-3UTR CCA 90 bp GATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGCTTGCGTGACAGCGGGAGGATaGGTCTTGAGTTTCTCAGGT +
Preference number: 2 (lower is better)
Translates to: DPAIPLLGIYPRDTLYACVTAGG*VLSFSG
Trigger: ACCTGAGAAACTCAAGACCCATCCTCCCGCTGTCAC...GCAAGCATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
3UTR-3UTR CCA 90 bp GATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGCTTGCTGGGTCCACTGTACATaGGACAGCTCCAAAAGAGGA +
Preference number: 2 (lower is better)
Translates to: DPAIPLLGIYPRDTLYACWVHCT*DSSKRG
Trigger: TCCTCTTTTGGAGCTGTCCCATGTACAGTGGACCCA...GCAAGCATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
3UTR-3UTR CCA 90 bp ATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTTTCCTGATGTCACCCTaGGTGAGACGTGGTCCTCAG +
Preference number: 2 (lower is better)
Translates to: IHFMLAHLYKIIHCRADCFLMSP*VRRGPQ
Trigger: CTGAGGACCACGTCTCACCCAGGGTGACATCAGGAA...ACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
3UTR-3UTR CCA 90 bp AAACATACACTTATTGTGGCCCTCTGCACAAGCAATCTGGTTGTGCAGAGTCTTAACATACACTTATTGTaGCCCTCTGCACAAGCAATC +
Preference number: 2 (lower is better)
Translates to: KHTLIVALCTSNLVVQSLNIHLL*PSAQAI
Trigger: GATTGCTTGTGCAGAGGGCCACAATAAGTGTATGTT...AAGACTCTGCACAACCAGATTGCTTGTGCAGAGGGCCACAATAAGTGTATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR-3UTR TCA 90 bp ATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTTTCCATTGTCCAAAGTaGCAGCGGGAGGATGGGTCT +
Preference number: 2 (lower is better)
Translates to: IHFMLAHLYKIIHCRADCFHCPK*QREDGS
Trigger: AGACCCATCCTCCCGCTGTCACTTTGGACAATGGAA...ACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
3UTR-3UTR GCA 90 bp AGAGCTGATTGTCATTGCAAAAGATTGGAAAGAATCCAAATGCTCATCATTGTGCAAGCAATCTGGTTGTaGAGAGTCTTGGTGTCCCCT +
Preference number: 2 (lower is better)
Translates to: RADCHCKRLERIQMLIIVQAIWL*RVLVSP
Trigger: AGGGGACACCAAGACTCTGCACAACCAGATTGCTTG...CACAATGATGAGCATTTGGATTCTTTCCAATCTTTTGCAATGACAATCAGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
3UTR-3UTR GCA 90 bp ACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTCATTCAAGCAATCTGGTTGTaGAGAGTCTTGGTGTCCCCT +
Preference number: 2 (lower is better)
Translates to: TLCLHICTRLFTAELIVIQAIWL*RVLVSP
Trigger: AGGGGACACCAAGACTCTGCACAACCAGATTGCTTG...AATGACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
3UTR-3UTR CCA 90 bp ACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTCATTTGGGTCCACTGTACATaGGACAGCTCCAAAAGAGGA +
Preference number: 2 (lower is better)
Translates to: TLCLHICTRLFTAELIVIWVHCT*DSSKRG
Trigger: TCCTCTTTTGGAGCTGTCCCATGTACAGTGGACCCA...AATGACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
3UTR-3UTR CCA 90 bp TTTGATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGCTCAGGAACTGAGCAGGTaGAGAATAAGGATTGGAGGG +
Preference number: 2 (lower is better)
Translates to: FDPAIPLLGIYPRDTLYAQELSR*RIRIGG
Trigger: CCCTCCAATCCTTATTCTCCACCTGCTCAGTTCCTG...AGCATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
3UTR-3UTR GCA 90 bp ACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTCATTCTTATTGTGGCCCTCTaGACAAGCAATCTGGTTGTG +
Preference number: 2 (lower is better)
Translates to: TLCLHICTRLFTAELIVILIVAL*TSNLVV
Trigger: CACAACCAGATTGCTTGTGCAGAGGGCCACAATAAG...AATGACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
3UTR-3UTR CCA 90 bp CCTTTTGATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATTCTGCACAAGCAATCTaGTTGTGCAGAGTCTTGGTG +
Preference number: 2 (lower is better)
Translates to: PFDPAIPLLGIYPRDTLYSAQAI*LCRVLV
Trigger: CACCAAGACTCTGCACAACCAGATTGCTTGTGCAGA...ATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATCAAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
3UTR-3UTR CCA 90 bp ATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTTCTGCACAAGCAATCTaGTTGTGCAGAGTCTTGGTG +
Preference number: 2 (lower is better)
Translates to: IHFMLAHLYKIIHCRADCSAQAI*LCRVLV
Trigger: CACCAAGACTCTGCACAACCAGATTGCTTGTGCAGA...ACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
3UTR-3UTR CCA 90 bp TTTGATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGCTTCTGCACAAGCAATCTaGTTGTGCAGAGTCTTGGTG +
Preference number: 2 (lower is better)
Translates to: FDPAIPLLGIYPRDTLYASAQAI*LCRVLV
Trigger: CACCAAGACTCTGCACAACCAGATTGCTTGTGCAGA...AGCATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
3UTR-3UTR CCA 90 bp AGAGCTGATTGTCATTGCAAAAGATTGGAAAGAATCCAAATGCTCATCATTGTGGTGGAGAATAAGGATTaGAGGGAGACTTTTCACTCT +
Preference number: 2 (lower is better)
Translates to: RADCHCKRLERIQMLIIVVENKD*RETFHS
Trigger: AGAGTGAAAAGTCTCCCTCCAATCCTTATTCTCCAC...CACAATGATGAGCATTTGGATTCTTTCCAATCTTTTGCAATGACAATCAGCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
3UTR TCA 72 bp ACCTTAGCCAGGGACGGCGCCAAGATGATCTGCTCCTaGGGGGACCGCAAGCTCCTGCAGGAGGGGAGCAAG +
Preference number: 3 (lower is better)
Translates to: TLARDGAKMICS*GDRKLLQEGSK
Trigger: CTTGCTCCCCTCCTGCAGGAGCTTGCGGTCCCCTCAGGAGCAGATCATCTTGGCGCCGTCCCTGGCTAAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR CAA 90 bp CAGGCTGAGTCCCTTCGCTCTTGGAAGTCTGCTTGTTCCAGCAGGACTCCTGCCGCCCTCCAAGACTCTTaGGGCAGGTCCCTCAGAGCC +
Preference number: 3 (lower is better)
Translates to: QAESLRSWKSACSSRTPAALQDS*GRSLRA
Trigger: GGCTCTGAGGGACCTGCCCAAAGAGTCTTGGAGGGC...GGCAGGAGTCCTGCTGGAACAAGCAGACTTCCAAGAGCGAAGGGACTCAGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR CAA 90 bp CAGGCTGAGTCCCTTCGCTCTTGGAAGTCTGCTTGTTCCAGCAGGACTCCTGCCGCAGCCACGGGTGTTTaGTTTGGCCCCTTCCCTTGT +
Preference number: 3 (lower is better)
Translates to: QAESLRSWKSACSSRTPAAATGV*FGPFPC
Trigger: ACAAGGGAAGGGGCCAAACAAAACACCCGTGGCTGC...GGCAGGAGTCCTGCTGGAACAAGCAGACTTCCAAGAGCGAAGGGACTCAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR TCA 72 bp TCCCGAGTGGCGAAGTCTGCATTCTCCTGGGTGAGCTaGGTCATCTCCATGTCAACCTTAGCCAGGGACGGC +
Preference number: 3 (lower is better)
Translates to: SRVAKSAFSWVS*VISMSTLARDG
Trigger: GCCGTCCCTGGCTAAGGTTGACATGGAGATGACTCAGCTCACCCAGGAGAATGCAGACTTCGCCACTCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR GCA 72 bp AACCACCCAATGAAGGGCAGAGAAGCTTCTTCGAGATaGCAACAGCTGCCAGGGAGCCCAGGGGAATGCTGG +
Preference number: 3 (lower is better)
Translates to: NHPMKGREASSR*QQLPGSPGECW
Trigger: CCAGCATTCCCCTGGGCTCCCTGGCAGCTGTTGGCATCTCGAAGAAGCTTCTCTGCCCTTCATTGGGTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR CAA 90 bp GAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCGCTGAGGCAGGAGAATaGCTTGAACTCGGGAAGCAG +
Preference number: 3 (lower is better)
Translates to: EASTIPDVTLGETWSSESAEAGE*LELGKQ
Trigger: CTGCTTCCCGAGTTCAAGCAATTCTCCTGCCTCAGC...GGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR-3UTR CAA 90 bp AGGAGGCAGCGGGCAACCTGTCAGAGATCTCGACAGGGAAAGAAGGAGGGGATTAGACTGGGTGTCGTGTaGCAGAGGCTAGCACCATTC +
Preference number: 3 (lower is better)
Translates to: RRQRATCQRSRQGKKEGIRLGVV*QRLAPF
Trigger: GAATGGTGCTAGCCTCTGCAACACGACACCCAGTCT...AATCCCCTCCTTCTTTCCCTGTCGAGATCTCTGACAGGTTGCCCGCTGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR CAA 90 bp TTCCCTCAGGCTGAGTCCCTTCGCTCTTGGAAGTCTGCTTGTTCCAGCAGGACTCCACGGGTGTTTTGTTaGGCCCCTTCCCTTGTCCCA +
Preference number: 3 (lower is better)
Translates to: FPQAESLRSWKSACSSRTPRVFC*APSLVP
Trigger: TGGGACAAGGGAAGGGGCCAAACAAAACACCCGTGG...AGTCCTGCTGGAACAAGCAGACTTCCAAGAGCGAAGGGACTCAGCCTGAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR GCA 72 bp CAGGGATCACTTTCTCCTGGGCAATGCACTGCAGGATaGGGGGAGCTCCATAAAGTCCTCCCATGCAGGAAG +
Preference number: 3 (lower is better)
Translates to: QGSLSPGQCTAG*GELHKVLPCRK
Trigger: CTTCCTGCATGGGAGGACTTTATGGAGCTCCCCGCATCCTGCAGTGCATTGCCCAGGAGAAAGTGATCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR GCA 72 bp GGGACCCAACAGCCCCCAACAGGGAGACCCAGGGGTTaGACATGTGGGTATAGAAAGAAGTGGATCTTCTCC +
Preference number: 3 (lower is better)
Translates to: GTQQPPTGRPRG*TCGYRKKWIFS
Trigger: GGAGAAGATCCACTTCTTTCTATACCCACATGTGCAACCCCTGGGTCTCCCTGTTGGGGGCTGTTGGGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR CCA 72 bp CTCCATATGTTCCCTCAGGCTGAGTCCCTTCGCTCTTaGAAGTCTGCTTGTTCCAGCAGGACTCCTGCCCCT +
Preference number: 3 (lower is better)
Translates to: LHMFPQAESLRS*KSACSSRTPAP
Trigger: AGGGGCAGGAGTCCTGCTGGAACAAGCAGACTTCCAAGAGCGAAGGGACTCAGCCTGAGGGAACATATGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR CAA 90 bp CAGGCTGAGTCCCTTCGCTCTTGGAAGTCTGCTTGTTCCAGCAGGACTCCTGCCGGCCAGAACGTTCACTaGACCCACAAAAACAAAGGC +
Preference number: 3 (lower is better)
Translates to: QAESLRSWKSACSSRTPAGQNVH*THKNKG
Trigger: GCCTTTGTTTTTGTGGGTCAAGTGAACGTTCTGGCC...GGCAGGAGTCCTGCTGGAACAAGCAGACTTCCAAGAGCGAAGGGACTCAGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR TCA 72 bp AGGGGAGCAAGAGAGACCTCATCCACCGGAAAAAGCTaGAGTTGGAGGCTGATCCAAGGTGAAGCCCTGGAC +
Preference number: 3 (lower is better)
Translates to: RGARETSSTGKS*SWRLIQGEALD
Trigger: GTCCAGGGCTTCACCTTGGATCAGCCTCCAACTTCAGCTTTTTCCGGTGGATGAGGTCTCTCTTGCTCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR CCA 72 bp AAACAAAGGCCATGGTCACCAAGCTGGTCAGGCAGATaGCAGCCACGGGTGTTTTGTTTGGCCCCTTCCCTT +
Preference number: 3 (lower is better)
Translates to: KQRPWSPSWSGR*QPRVFCLAPSL
Trigger: AAGGGAAGGGGCCAAACAAAACACCCGTGGCTGCCATCTGCCTGACCAGCTTGGTGACCATGGCCTTTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR CCA 72 bp CCAAGACTCTTTGGGCAGGTCCCTCAGAGCCGTAACTaGGAGCTTTCTCTAAGAGCAGGTGCTCAGAGCAGT +
Preference number: 3 (lower is better)
Translates to: PRLFGQVPQSRN*ELSLRAGAQSS
Trigger: ACTGCTCTGAGCACCTGCTCTTAGAGAAAGCTCCCAGTTACGGCTCTGAGGGACCTGCCCAAAGAGTCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR CAA 90 bp CACTGTATCACAAACATGATGAGAAGGGACCCAACAGCCCCCAACAGGGAGACCACGAAGGTCCTGAGCTaGGGTCCACTGTACATGGGA +
Preference number: 3 (lower is better)
Translates to: HCITNMMRRDPTAPNRETTKVLS*GPLYMG
Trigger: TCCCATGTACAGTGGACCCAAGCTCAGGACCTTCGT...GGTCTCCCTGTTGGGGGCTGTTGGGTCCCTTCTCATCATGTTTGTGATACAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR CAA 90 bp CCTCCAAGACTCTTTGGGCAGGTCCCTCAGAGCCGTAACTGGGAGCTTTCTCTAAGGCAGGAGAATTGCTaGAACTCGGGAAGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: PPRLFGQVPQSRNWELSLRQENC*NSGSRG
Trigger: ACCTCTGCTTCCCGAGTTCAAGCAATTCTCCTGCCT...TAGAGAAAGCTCCCAGTTACGGCTCTGAGGGACCTGCCCAAAGAGTCTTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR TCA 72 bp GTTTCTCAGGTTGGAGAAGCAGCTCCACGAAGGTCCTaGGCTTGGGTCCACTGTACATGGGACAGCTCCAAA +
Preference number: 3 (lower is better)
Translates to: VSQVGEAAPRRS*AWVHCTWDSSK
Trigger: TTTGGAGCTGTCCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCTGAGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR TCA 72 bp TCCTGGTTAGCTGGAGGAGCTGATCCATGTCCTTGGTaGATTCCAGTAGCGTGCCCTCCAAGACTCTTTGGG +
Preference number: 3 (lower is better)
Translates to: SWLAGGADPCPW*IPVACPPRLFG
Trigger: CCCAAAGAGTCTTGGAGGGCACGCTACTGGAATTCACCAAGGACATGGATCAGCTCCTCCAGCTAACCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR TCA 72 bp TGGCTACTCTCAAGCTTCCTGGTTAGCTGGAGGAGCTaGTCCATGTCCTTGGTGAATTCCAGTAGCGTGCCC +
Preference number: 3 (lower is better)
Translates to: WLLSSFLVSWRS*SMSLVNSSSVP
Trigger: GGGCACGCTACTGGAATTCACCAAGGACATGGATCAGCTCCTCCAGCTAACCAGGAAGCTTGAGAGTAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR GCA 72 bp ACTGCAGGATGCGGGGAGCTCCATAAAGTCCTCCCATaGAGGAAGCCAGGGACGAGATGTATAAGCCCAAAA +
Preference number: 3 (lower is better)
Translates to: TAGCGELHKVLP*RKPGTRCISPK
Trigger: TTTTGGGCTTATACATCTCGTCCCTGGCTTCCTGCATGGGAGGACTTTATGGAGCTCCCCGCATCCTGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR CAA 90 bp AGAGCTCTTCAGACTGGGTGTCGTGTTGCAGAGGCTAGCACCATTCCTGATGTCTGGTTGTGCAGAGTCTaGGTGTCCCCTGCTAGTCTT +
Preference number: 3 (lower is better)
Translates to: RALQTGCRVAEASTIPDVWLCRV*VSPASL
Trigger: AAGACTAGCAGGGGACACCAAGACTCTGCACAACCA...GACATCAGGAATGGTGCTAGCCTCTGCAACACGACACCCAGTCTGAAGAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR CCA 72 bp GTGTTGCAGAGGCTAGCACCATTCCTGATGTCACCCTaGGTGAGACGTGGTCCTCAGAATCCAGATTTCCTT +
Preference number: 3 (lower is better)
Translates to: VLQRLAPFLMSP*VRRGPQNPDFL
Trigger: AAGGAAATCTGGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTGCAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR-3UTR CAA 90 bp GTTAACCAGGGTATACACCCACTGTATCACAAACATGATGAGAAGGGACCCAACGTTTGGCCCCTTCCCTaGTCCCAGACAGGCAAGTGC +
Preference number: 3 (lower is better)
Translates to: VNQGIHPLYHKHDEKGPNVWPLP*SQTGKC
Trigger: GCACTTGCCTGTCTGGGACAAGGGAAGGGGCCAAAC...GTTGGGTCCCTTCTCATCATGTTTGTGATACAGTGGGTGTATACCCTGGTTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR CAA 90 bp GAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCAAATGTAGATTTCCATaGTCCAAAGTGACAGCGGGA +
Preference number: 3 (lower is better)
Translates to: EASTIPDVTLGETWSSESKCRFP*SKVTAG
Trigger: TCCCGCTGTCACTTTGGACAATGGAAATCTACATTT...GGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR TCA 72 bp AAGTTGATGGTGACGATGGGGGCCAGAACGTTCACTTaGCCCACAAAAACAAAGGCCATGGTCACCAAGCTG +
Preference number: 3 (lower is better)
Translates to: KLMVTMGARTFT*PTKTKAMVTKL
Trigger: CAGCTTGGTGACCATGGCCTTTGTTTTTGTGGGTCAAGTGAACGTTCTGGCCCCCATCGTCACCATCAACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR CCA 72 bp TGTAGATTTCCATTGTCCAAAGTGACAGCGGGAGGATaGGTCTTGAGTTTCTCAGGTTGGAGAAGCAGCTCC +
Preference number: 3 (lower is better)
Translates to: CRFPLSKVTAGG*VLSFSGWRSSS
Trigger: GGAGCTGCTTCTCCAACCTGAGAAACTCAAGACCCATCCTCCCGCTGTCACTTTGGACAATGGAAATCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR CCA 72 bp AGACCCAGGGGTTGCACATGTGGGTATAGAAAGAAGTaGATCTTCTCCAGACATCTTGTTCTTGGAGCCTGG +
Preference number: 3 (lower is better)
Translates to: RPRGCTCGYRKK*IFSRHLVLGAW
Trigger: CCAGGCTCCAAGAACAAGATGTCTGGAGAAGATCCACTTCTTTCTATACCCACATGTGCAACCCCTGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR CAA 90 bp GTTAACCAGGGTATACACCCACTGTATCACAAACATGATGAGAAGGGACCCAACTATGTCAGCATGAAGTaGATGGTGACGATGGGGGCC +
Preference number: 3 (lower is better)
Translates to: VNQGIHPLYHKHDEKGPNYVSMK*MVTMGA
Trigger: GGCCCCCATCGTCACCATCAACTTCATGCTGACATA...GTTGGGTCCCTTCTCATCATGTTTGTGATACAGTGGGTGTATACCCTGGTTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR CCA 72 bp AACATACACTTATTGTGGCCCTCTGCACAAGCAATCTaGTTGTGCAGAGTCTTGGTGTCCCCTGCTAGTCTT +
Preference number: 3 (lower is better)
Translates to: NIHLLWPSAQAI*LCRVLVSPASL
Trigger: AAGACTAGCAGGGGACACCAAGACTCTGCACAACCAGATTGCTTGTGCAGAGGGCCACAATAAGTGTATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR CCA 72 bp TTACCTCTAGGCCAGGGTAGACAGGAACTGAGCAGGTaGAGAATAAGGATTGGAGGGAGACTTTTCACTCTA +
Preference number: 3 (lower is better)
Translates to: LPLGQGRQELSR*RIRIGGRLFTL
Trigger: TAGAGTGAAAAGTCTCCCTCCAATCCTTATTCTCCACCTGCTCAGTTCCTGTCTACCCTGGCCTAGAGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR-3UTR CAA 90 bp AAACATACACTTATTGTGGCCCTCTGCACAAGCAATCTGGTTGTGCAGAGTCTTGCACAAGCAATCTGGTaGTGCAGAGTCTTGGTGTCC +
Preference number: 3 (lower is better)
Translates to: KHTLIVALCTSNLVVQSLAQAIW*CRVLVS
Trigger: GGACACCAAGACTCTGCACAACCAGATTGCTTGTGC...AAGACTCTGCACAACCAGATTGCTTGTGCAGAGGGCCACAATAAGTGTATGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR-3UTR CAA 90 bp CAGGTGGAGAATAAGGATTGGAGGGAGACTTTTCACTCTATATATCTTTTGGGTGCTGAGGCAGGAGAATaGCTTGAACTCGGGAAGCAG +
Preference number: 3 (lower is better)
Translates to: QVENKDWRETFHSIYLLGAEAGE*LELGKQ
Trigger: CTGCTTCCCGAGTTCAAGCAATTCTCCTGCCTCAGC...ACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCCAATCCTTATTCTCCACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR-3UTR CAA 90 bp CAGGTGGAGAATAAGGATTGGAGGGAGACTTTTCACTCTATATATCTTTTGGGTAGACTGGGTGTCGTGTaGCAGAGGCTAGCACCATTC +
Preference number: 3 (lower is better)
Translates to: QVENKDWRETFHSIYLLGRLGVV*QRLAPF
Trigger: GAATGGTGCTAGCCTCTGCAACACGACACCCAGTCT...ACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCCAATCCTTATTCTCCACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR-3UTR CAA 90 bp CTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCAGATTGTCATTGCAAAAGATaGGAAAGAATCCAAATGCTC +
Preference number: 3 (lower is better)
Translates to: LAPFLMSPWVRRGPQNPDCHCKR*ERIQML
Trigger: GAGCATTTGGATTCTTTCCAATCTTTTGCAATGACA...ATCTGGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
3UTR GCA 72 bp GGAACACATGGACAGGGAGAAGTAAGAGTAGTCCACTaGAACGTATGTCAGCATGAAGTTGATGGTGACGAT +
Preference number: 3 (lower is better)
Translates to: GTHGQGEVRVVH*NVCQHEVDGDD
Trigger: ATCGTCACCATCAACTTCATGCTGACATACGTTGCAGTGGACTACTCTTACTTCTCCCTGTCCATGTGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR-3UTR CAA 90 bp GATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGCTTGCACGAAGGTCCTGAGCTaGGGTCCACTGTACATGGGA +
Preference number: 3 (lower is better)
Translates to: DPAIPLLGIYPRDTLYACTKVLS*GPLYMG
Trigger: TCCCATGTACAGTGGACCCAAGCTCAGGACCTTCGT...GCAAGCATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
3UTR-3UTR CAA 90 bp CAGGTGGAGAATAAGGATTGGAGGGAGACTTTTCACTCTATATATCTTTTGGGTAGGCAGGAGAATTGCTaGAACTCGGGAAGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: QVENKDWRETFHSIYLLGRQENC*NSGSRG
Trigger: ACCTCTGCTTCCCGAGTTCAAGCAATTCTCCTGCCT...ACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCCAATCCTTATTCTCCACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR-3UTR CAA 90 bp GGAGGGAGACTTTTCACTCTATATATCTTTTGGGTGTGGAAACATGTGAGTGTAGCACAAGCAATCTGGTaGTGCAGAGTCTTGGTGTCC +
Preference number: 3 (lower is better)
Translates to: GGRLFTLYIFWVWKHVSVAQAIW*CRVLVS
Trigger: GGACACCAAGACTCTGCACAACCAGATTGCTTGTGC...TACACTCACATGTTTCCACACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR-3UTR CAA 90 bp AGAGCTGATTGTCATTGCAAAAGATTGGAAAGAATCCAAATGCTCATCATTGTGACGAAGGTCCTGAGCTaGGGTCCACTGTACATGGGA +
Preference number: 3 (lower is better)
Translates to: RADCHCKRLERIQMLIIVTKVLS*GPLYMG
Trigger: TCCCATGTACAGTGGACCCAAGCTCAGGACCTTCGT...CACAATGATGAGCATTTGGATTCTTTCCAATCTTTTGCAATGACAATCAGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
3UTR-3UTR CAA 90 bp ATCCTAGAGATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAACGAAGGTCCTGAGCTaGGGTCCACTGTACATGGGA +
Preference number: 3 (lower is better)
Translates to: ILEIHFMLAHLYKIIHCRTKVLS*GPLYMG
Trigger: TCCCATGTACAGTGGACCCAAGCTCAGGACCTTCGT...TCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTATCTCTAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
3UTR-3UTR CAA 90 bp ATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTGCTGAGGCAGGAGAATaGCTTGAACTCGGGAAGCAG +
Preference number: 3 (lower is better)
Translates to: IHFMLAHLYKIIHCRADCAEAGE*LELGKQ
Trigger: CTGCTTCCCGAGTTCAAGCAATTCTCCTGCCTCAGC...ACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
3UTR-3UTR CAA 90 bp TTTGATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGCTAGACTGGGTGTCGTGTaGCAGAGGCTAGCACCATTC +
Preference number: 3 (lower is better)
Translates to: FDPAIPLLGIYPRDTLYARLGVV*QRLAPF
Trigger: GAATGGTGCTAGCCTCTGCAACACGACACCCAGTCT...AGCATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
3UTR-3UTR CAA 90 bp ATCCTAGAGATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAAGGCAGGAGAATTGCTaGAACTCGGGAAGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: ILEIHFMLAHLYKIIHCRRQENC*NSGSRG
Trigger: ACCTCTGCTTCCCGAGTTCAAGCAATTCTCCTGCCT...TCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTATCTCTAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
3UTR-3UTR CAA 90 bp CCTTTTGATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATAGGCAGGAGAATTGCTaGAACTCGGGAAGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: PFDPAIPLLGIYPRDTLYRQENC*NSGSRG
Trigger: ACCTCTGCTTCCCGAGTTCAAGCAATTCTCCTGCCT...ATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATCAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
3UTR-3UTR CAA 90 bp ATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTTGGTTGTGCAGAGTCTaGGTGTCCCCTGCTAGTCTT +
Preference number: 3 (lower is better)
Translates to: IHFMLAHLYKIIHCRADCWLCRV*VSPASL
Trigger: AAGACTAGCAGGGGACACCAAGACTCTGCACAACCA...ACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
3UTR GCA 72 bp CACTTTATGCTTGCACATTTGTACAAGATTATTCACTaGAGAGCTGATTGTCATTGCAAAAGATTGGAAAGA +
Preference number: 3 (lower is better)
Translates to: HFMLAHLYKIIH*RADCHCKRLER
Trigger: TCTTTCCAATCTTTTGCAATGACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR GCA 90 bp CCTGGGCAATGCACTGCAGGATGCGGGGAGCTCCATAAAGTCCTCCCATGCAGGCGCCACCGCTGCCGATaGTGCTGCGCTCCCCGACGC +
Preference number: 4 (lower is better)
Translates to: PGQCTAGCGELHKVLPCRRHRCR*CCAPRR
Trigger: GCGTCGGGGAGCGCAGCAGCATCGGCAGCGGTGGCG...CCTGCATGGGAGGACTTTATGGAGCTCCCCGCATCCTGCAGTGCATTGCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR GCA 90 bp GCTTTCTCTAAGAGCAGGTGCTCAGAGCAGTGGAGGCCTTCTGCGCCCTCCCTGCGCTGCCGATGCTGCTaGGCTCCCCGACGCCAATGC +
Preference number: 4 (lower is better)
Translates to: AFSKSRCSEQWRPSAPSLRCRCC*APRRQC
Trigger: GCATTGGCGTCGGGGAGCGCAGCAGCATCGGCAGCG...CAGGGAGGGCGCAGAAGGCCTCCACTGCTCTGAGCACCTGCTCTTAGAGAAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR TCA 90 bp GGTGTCGTGTTGCAGAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTCTTCTGCGCCCTCCCTaGGCACCGGCTCAGGCACCG +
Preference number: 4 (lower is better)
Translates to: GVVLQRLAPFLMSPWVRRLLRPP*APAQAP
Trigger: CGGTGCCTGAGCCGGTGCTCAGGGAGGGCGCAGAAG...ACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTGCAACACGACACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp TTCCCTCAGGCTGAGTCCCTTCGCTCTTGGAAGTCTGCTTGTTCCAGCAGGACTCTTCTGCGCCCTCCCTaGGCACCGGCTCAGGCACCG +
Preference number: 4 (lower is better)
Translates to: FPQAESLRSWKSACSSRTLLRPP*APAQAP
Trigger: CGGTGCCTGAGCCGGTGCTCAGGGAGGGCGCAGAAG...AGTCCTGCTGGAACAAGCAGACTTCCAAGAGCGAAGGGACTCAGCCTGAGGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR GCA 90 bp GGTGTCGTGTTGCAGAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTCACCGCTGCCGATGCTaGTGCGCTCCCCGACGCCAA +
Preference number: 4 (lower is better)
Translates to: GVVLQRLAPFLMSPWVRRHRCRC*CAPRRQ
Trigger: TTGGCGTCGGGGAGCGCAGCAGCATCGGCAGCGGTG...ACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTGCAACACGACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp TATCAGGAAGTCATAGCGAAGGGCCTCTCGAGTGCAGATGGCGCCCAGGAGGAACACCGCTGCCGATGCTaGTGCGCTCCCCGACGCCAA +
Preference number: 4 (lower is better)
Translates to: YQEVIAKGLSSADGAQEEHRCRC*CAPRRQ
Trigger: TTGGCGTCGGGGAGCGCAGCAGCATCGGCAGCGGTG...TTCCTCCTGGGCGCCATCTGCACTCGAGAGGCCCTTCGCTATGACTTCCTGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR GCA 90 bp AGAGCTCTTCAGACTGGGTGTCGTGTTGCAGAGGCTAGCACCATTCCTGATGTCCGCCACCGCTGCCGATaGTGCTGCGCTCCCCGACGC +
Preference number: 4 (lower is better)
Translates to: RALQTGCRVAEASTIPDVRHRCR*CCAPRR
Trigger: GCGTCGGGGAGCGCAGCAGCATCGGCAGCGGTGGCG...GACATCAGGAATGGTGCTAGCCTCTGCAACACGACACCCAGTCTGAAGAGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp CCTGGGCAATGCACTGCAGGATGCGGGGAGCTCCATAAAGTCCTCCCATGCAGGAGGTGCTCAGAGCAGTaGAGGCCTTCTGCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PGQCTAGCGELHKVLPCRRCSEQ*RPSAPS
Trigger: GGAGGGCGCAGAAGGCCTCCACTGCTCTGAGCACCT...CCTGCATGGGAGGACTTTATGGAGCTCCCCGCATCCTGCAGTGCATTGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR TCA 90 bp AGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTACATGGGGAGGCTGATCCAAGGTaGAGCCCTGGACTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: RLEKQLHEGPELGSTVHGEADPR*SPGLAR
Trigger: CCGGGCCAGTCCAGGGCTTCACCTTGGATCAGCCTC...CCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp TATCAGGAAGTCATAGCGAAGGGCCTCTCGAGTGCAGATGGCGCCCAGGAGGAAGAGGCTGATCCAAGGTaGAGCCCTGGACTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: YQEVIAKGLSSADGAQEEEADPR*SPGLAR
Trigger: CCGGGCCAGTCCAGGGCTTCACCTTGGATCAGCCTC...TTCCTCCTGGGCGCCATCTGCACTCGAGAGGCCCTTCGCTATGACTTCCTGATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR GCA 90 bp CAGAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCGCTGCCGATGCTGCTaGGCTCCCCGACGCCAATGC +
Preference number: 4 (lower is better)
Translates to: QRLAPFLMSPWVRRGPQNRCRCC*APRRQC
Trigger: GCATTGGCGTCGGGGAGCGCAGCAGCATCGGCAGCG...ATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp CAGAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCACCGCTGCCGATGCTaGTGCGCTCCCCGACGCCAA +
Preference number: 4 (lower is better)
Translates to: QRLAPFLMSPWVRRGPQNHRCRC*CAPRRQ
Trigger: TTGGCGTCGGGGAGCGCAGCAGCATCGGCAGCGGTG...ATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp CTAGTAGTGAGGCATCAGCTGCTCCCGGTTCACGAGGGAGGAGTGGTGGTAGCGAAGATGATCTGCTCCTaGGGGGACCGCAAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LVVRHQLLPVHEGGVVVAKMICS*GDRKLL
Trigger: CAGGAGCTTGCGGTCCCCTCAGGAGCAGATCATCTT...CGCTACCACCACTCCTCCCTCGTGAACCGGGAGCAGCTGATGCCTCACTACTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR GCA 90 bp AGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTACATGGGGCACCGGGGTCAGGCTaGAGGAACACATGGACAGGG +
Preference number: 4 (lower is better)
Translates to: RLEKQLHEGPELGSTVHGAPGSG*RNTWTG
Trigger: CCCTGTCCATGTGTTCCTGCAGCCTGACCCCGGTGC...CCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp GAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCCATAGAGCAGCCCGATaGTGCCTCCCGTCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: EASTIPDVTLGETWSSESHRAAR*CLPSAH
Trigger: GTGGGCAGACGGGAGGCACCATCGGGCTGCTCTATG...GGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp AGTGCAGGGATCACTTTCTCCTGGGCAATGCACTGCAGGATGCGGGGAGCTCCAGCTGAAGTTGGAGGCTaGTCCAAGGTGAAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SAGITFSWAMHCRMRGAPAEVGG*SKVKPW
Trigger: CCAGGGCTTCACCTTGGATCAGCCTCCAACTTCAGC...TGGAGCTCCCCGCATCCTGCAGTGCATTGCCCAGGAGAAAGTGATCCCTGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR GCA 90 bp TTTCTCAGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTAAGTAGACGCCACCGCTaGCGATGCTGCTGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: FLRLEKQLHEGPELGSTVSRRHR*RCCCAP
Trigger: GGGAGCGCAGCAGCATCGGCAGCGGTGGCGTCTACT...TACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCTGAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp TTTCTCAGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTAATGGTGCCTCCCGTCTaGCCACCCAGGACCGAGGAG +
Preference number: 4 (lower is better)
Translates to: FLRLEKQLHEGPELGSTVMVPPV*PPRTEE
Trigger: CTCCTCGGTCCTGGGTGGGCAGACGGGAGGCACCAT...TACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCTGAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp CTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCAGATATGGTGCCTCCCGTCTaGCCACCCAGGACCGAGGAG +
Preference number: 4 (lower is better)
Translates to: LAPFLMSPWVRRGPQNPDMVPPV*PPRTEE
Trigger: CTCCTCGGTCCTGGGTGGGCAGACGGGAGGCACCAT...ATCTGGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp GAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCCGAGATGCCAACAGCTaGCAGGGAGCCCAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: EASTIPDVTLGETWSSESRDANS*QGAQGN
Trigger: ATTCCCCTGGGCTCCCTGGCAGCTGTTGGCATCTCG...GGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp CAGGCTGAGTCCCTTCGCTCTTGGAAGTCTGCTTGTTCCAGCAGGACTCCTGCCCTTTCTCCTGGGCAATaGACTGCAGGATGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: QAESLRSWKSACSSRTPALSPGQ*TAGCGE
Trigger: CTCCCCGCATCCTGCAGTGCATTGCCCAGGAGAAAG...GGCAGGAGTCCTGCTGGAACAAGCAGACTTCCAAGAGCGAAGGGACTCAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR GCA 90 bp GAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCTCTGGACAGGGAGACTaGTCTGCTCCTGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: EASTIPDVTLGETWSSESSGQGD*SAPGTA
Trigger: GGCTGTCCCAGGAGCAGAGCAGTCTCCCTGTCCAGA...GGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469902.6
CDS-3UTR CCA 90 bp CCTGGGCAATGCACTGCAGGATGCGGGGAGCTCCATAAAGTCCTCCCATGCAGGCACGGGTGTTTTGTTTaGCCCCTTCCCTTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: PGQCTAGCGELHKVLPCRHGCFV*PLPLSQ
Trigger: CTGGGACAAGGGAAGGGGCCAAACAAAACACCCGTG...CCTGCATGGGAGGACTTTATGGAGCTCCCCGCATCCTGCAGTGCATTGCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR CCA 90 bp AGTGCAGGGATCACTTTCTCCTGGGCAATGCACTGCAGGATGCGGGGAGCTCCATCCAAGGTGAAGCCCTaGACTGGCCCGGCCAATGTA +
Preference number: 4 (lower is better)
Translates to: SAGITFSWAMHCRMRGAPSKVKP*TGPANV
Trigger: TACATTGGCCGGGCCAGTCCAGGGCTTCACCTTGGA...TGGAGCTCCCCGCATCCTGCAGTGCATTGCCCAGGAGAAAGTGATCCCTGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR TCA 90 bp GTGTCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGGAGGCTGATCCAAGGTaGAGCCCTGGACTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: VSPASLSTCIELFRLGVVEADPR*SPGLAR
Trigger: CCGGGCCAGTCCAGGGCTTCACCTTGGATCAGCCTC...CACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp AGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTACATGGGGCTGAAGTTGGAGGCTaGTCCAAGGTGAAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RLEKQLHEGPELGSTVHGAEVGG*SKVKPW
Trigger: CCAGGGCTTCACCTTGGATCAGCCTCCAACTTCAGC...CCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp GAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCAAGATGATCTGCTCCTaGGGGGACCGCAAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: EASTIPDVTLGETWSSESKMICS*GDRKLL
Trigger: CAGGAGCTTGCGGTCCCCTCAGGAGCAGATCATCTT...GGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp GGTGTCGTGTTGCAGAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGCTCCACGAAGGTCCTaGGCTTGGGTCCACTGTACA +
Preference number: 4 (lower is better)
Translates to: GVVLQRLAPFLMSPWVRRAPRRS*AWVHCT
Trigger: TGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGC...ACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTGCAACACGACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp TGTAGATTTCCATTGTCCAAAGTGACAGCGGGAGGATGGGTCTTGAGTTTCTCACGCCACCGCTGCCGATaGTGCTGCGCTCCCCGACGC +
Preference number: 4 (lower is better)
Translates to: CRFPLSKVTAGGWVLSFSRHRCR*CCAPRR
Trigger: GCGTCGGGGAGCGCAGCAGCATCGGCAGCGGTGGCG...TGAGAAACTCAAGACCCATCCTCCCGCTGTCACTTTGGACAATGGAAATCTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp CCTCTGCACAAGCAATCTGGTTGTGCAGAGTCTTGGTGTCCCCTGCTAGTCTTAAGAGCAGCCCGATGGTaGCTCCCGTCTGCCCACCCA +
Preference number: 4 (lower is better)
Translates to: PLHKQSGCAESWCPLLVLRAARW*LPSAHP
Trigger: TGGGTGGGCAGACGGGAGGCACCATCGGGCTGCTCT...TAAGACTAGCAGGGGACACCAAGACTCTGCACAACCAGATTGCTTGTGCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp TTTCTCAGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTAGAAGGGCCTCTCGAGTaGAGATGGCGCCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: FLRLEKQLHEGPELGSTVEGPLE*RWRPGG
Trigger: TCCTCCTGGGCGCCATCTGCACTCGAGAGGCCCTTC...TACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCTGAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp AGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTACATGGGTCCCACATGAACAGCTaGGTCTTCCACCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RLEKQLHEGPELGSTVHGSHMNS*VFHQGW
Trigger: CCAGCCCTGGTGGAAGACCCAGCTGTTCATGTGGGA...CCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp AGAGCTCTTCAGACTGGGTGTCGTGTTGCAGAGGCTAGCACCATTCCTGATGTCCATAGAGCAGCCCGATaGTGCCTCCCGTCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: RALQTGCRVAEASTIPDVHRAAR*CLPSAH
Trigger: GTGGGCAGACGGGAGGCACCATCGGGCTGCTCTATG...GACATCAGGAATGGTGCTAGCCTCTGCAACACGACACCCAGTCTGAAGAGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp CAGAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCTCTCGAGTGCAGATaGCGCCCAGGAGGAAGACGA +
Preference number: 4 (lower is better)
Translates to: QRLAPFLMSPWVRRGPQNPLECR*RPGGRR
Trigger: TCGTCTTCCTCCTGGGCGCCATCTGCACTCGAGAGG...ATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp TTTCTCAGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTAAGGTGCTCAGAGCAGTaGAGGCCTTCTGCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: FLRLEKQLHEGPELGSTVRCSEQ*RPSAPS
Trigger: GGAGGGCGCAGAAGGCCTCCACTGCTCTGAGCACCT...TACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCTGAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp CAGAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCCTCCAAGACTCTTTaGGCAGGTCCCTCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: QRLAPFLMSPWVRRGPQNPSKTL*AGPSEP
Trigger: CGGCTCTGAGGGACCTGCCCAAAGAGTCTTGGAGGG...ATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp TTTCTCAGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTAAGACTGCTCTGCTCCTaGGACAGCCAGCTCCCAGCG +
Preference number: 4 (lower is better)
Translates to: FLRLEKQLHEGPELGSTVRLLCS*DSQLPA
Trigger: CGCTGGGAGCTGGCTGTCCCAGGAGCAGAGCAGTCT...TACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCTGAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469902.6
CDS-3UTR TCA 90 bp AGAGCTCTTCAGACTGGGTGTCGTGTTGCAGAGGCTAGCACCATTCCTGATGTCGCACAGGCTCCCACATaGACAGCTGGGTCTTCCACC +
Preference number: 4 (lower is better)
Translates to: RALQTGCRVAEASTIPDVAQAPT*TAGSST
Trigger: GGTGGAAGACCCAGCTGTTCATGTGGGAGCCTGTGC...GACATCAGGAATGGTGCTAGCCTCTGCAACACGACACCCAGTCTGAAGAGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp AGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTACATGGGACAGCTCCAAAAGGCTCCACGAAGGTCCTaGGCTTGGGTCCACTGTACA +
Preference number: 4 (lower is better)
Translates to: SSTKVLSLGPLYMGQLQKAPRRS*AWVHCT
Trigger: TGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGC...CTTTTGGAGCTGTCCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp TTCCCTCAGGCTGAGTCCCTTCGCTCTTGGAAGTCTGCTTGTTCCAGCAGGACTGCTCCACGAAGGTCCTaGGCTTGGGTCCACTGTACA +
Preference number: 4 (lower is better)
Translates to: FPQAESLRSWKSACSSRTAPRRS*AWVHCT
Trigger: TGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGC...AGTCCTGCTGGAACAAGCAGACTTCCAAGAGCGAAGGGACTCAGCCTGAGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR TCA 90 bp CCTGGGCAATGCACTGCAGGATGCGGGGAGCTCCATAAAGTCCTCCCATGCAGGATTCAGCAAAGCCGGTaGTATACATGGCACCTGTCC +
Preference number: 4 (lower is better)
Translates to: PGQCTAGCGELHKVLPCRIQQSR*YTWHLS
Trigger: GGACAGGTGCCATGTATATCACCGGCTTTGCTGAAT...CCTGCATGGGAGGACTTTATGGAGCTCCCCGCATCCTGCAGTGCATTGCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR GCA 90 bp GAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCTCATGGAAGAGCTCCTaGACCTGGGACATCTGGGTC +
Preference number: 4 (lower is better)
Translates to: EASTIPDVTLGETWSSESSWKSS*TWDIWV
Trigger: GACCCAGATGTCCCAGGTGCAGGAGCTCTTCCATGA...GGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393469.8
ENST00000469902.6
CDS-3UTR GCA 90 bp CTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCAGATGGCATCCTGCTGGGCTaGCTCATGGAAGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LAPFLMSPWVRRGPQNPDGILLG*LMEELL
Trigger: CAGGAGCTCTTCCATGAGGCAGCCCAGCAGGATGCC...ATCTGGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393469.8
ENST00000469902.6
CDS-3UTR GCA 90 bp CAAGCAATCTGGTTGTGCAGAGTCTTGGTGTCCCCTGCTAGTCTTAGTACCTGTAGAGCAGCCCGATGGTaGCTCCCGTCTGCCCACCCA +
Preference number: 4 (lower is better)
Translates to: QAIWLCRVLVSPASLSTCRAARW*LPSAHP
Trigger: TGGGTGGGCAGACGGGAGGCACCATCGGGCTGCTCT...ACAGGTACTAAGACTAGCAGGGGACACCAAGACTCTGCACAACCAGATTGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp CCTCTGCACAAGCAATCTGGTTGTGCAGAGTCTTGGTGTCCCCTGCTAGTCTTAGGGACCGCAAGCTCCTaGAGGAGGGGAGCAAGAGAG +
Preference number: 4 (lower is better)
Translates to: PLHKQSGCAESWCPLLVLGTASS*RRGARE
Trigger: CTCTCTTGCTCCCCTCCTGCAGGAGCTTGCGGTCCC...TAAGACTAGCAGGGGACACCAAGACTCTGCACAACCAGATTGCTTGTGCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp GAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCCACGGGTGTTTTGTTTaGCCCCTTCCCTTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: EASTIPDVTLGETWSSESHGCFV*PLPLSQ
Trigger: CTGGGACAAGGGAAGGGGCCAAACAAAACACCCGTG...GGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp AGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTACATGGGAGCTGGTCAGGCAGATaGCAGCCACGGGTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: RLEKQLHEGPELGSTVHGSWSGR*QPRVFC
Trigger: ACAAAACACCCGTGGCTGCCATCTGCCTGACCAGCT...CCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp AGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTACATGGGTCTCCTTGCCTGGGCTaGCTACTCTCAAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: RLEKQLHEGPELGSTVHGSPCLG*LLSSFL
Trigger: CAGGAAGCTTGAGAGTAGCCAGCCCAGGCAAGGAGA...CCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp AGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTACATGGGGGTGAAGCCCTGGACTaGCCCGGCCAATGTAGAAAT +
Preference number: 4 (lower is better)
Translates to: RLEKQLHEGPELGSTVHGGEALD*PGQCRN
Trigger: ATTTCTACATTGGCCGGGCCAGTCCAGGGCTTCACC...CCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp TATCAGGAAGTCATAGCGAAGGGCCTCTCGAGTGCAGATGGCGCCCAGGAGGAATTCCTGATGTCACCCTaGGTGAGACGTGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: YQEVIAKGLSSADGAQEEFLMSP*VRRGPQ
Trigger: CTGAGGACCACGTCTCACCCAGGGTGACATCAGGAA...TTCCTCCTGGGCGCCATCTGCACTCGAGAGGCCCTTCGCTATGACTTCCTGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR TCA 90 bp AGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTACATGGGACAGCTCCAAAAGCAGAAGCACCGCAACTaGAATTCCTCGCACAGCCCA +
Preference number: 4 (lower is better)
Translates to: SSTKVLSLGPLYMGQLQKQKHRN*NSSHSP
Trigger: TGGGCTGTGCGAGGAATTTCAGTTGCGGTGCTTCTG...CTTTTGGAGCTGTCCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp AGAGCTCTTCAGACTGGGTGTCGTGTTGCAGAGGCTAGCACCATTCCTGATGTCAAGATGATCTGCTCCTaGGGGGACCGCAAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: RALQTGCRVAEASTIPDVKMICS*GDRKLL
Trigger: CAGGAGCTTGCGGTCCCCTCAGGAGCAGATCATCTT...GACATCAGGAATGGTGCTAGCCTCTGCAACACGACACCCAGTCTGAAGAGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp AGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTACATGGGCTGCATTCTCCTGGGTaGGCTGAGTCATCTCCATGT +
Preference number: 4 (lower is better)
Translates to: RLEKQLHEGPELGSTVHGLHSPG*AESSPC
Trigger: ACATGGAGATGACTCAGCTCACCCAGGAGAATGCAG...CCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp GGTGTCGTGTTGCAGAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTCTGCATTCTCCTGGGTaGGCTGAGTCATCTCCATGT +
Preference number: 4 (lower is better)
Translates to: GVVLQRLAPFLMSPWVRRLHSPG*AESSPC
Trigger: ACATGGAGATGACTCAGCTCACCCAGGAGAATGCAG...ACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTGCAACACGACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp GTGTCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGTCCTGGGCAATGCACTaGAGGATGCGGGGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: VSPASLSTCIELFRLGVVSWAMH*RMRGAP
Trigger: TGGAGCTCCCCGCATCCTGCAGTGCATTGCCCAGGA...CACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp AGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTACATGGGTTCTCTAAGAGCAGGTaGTCAGAGCAGTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: RLEKQLHEGPELGSTVHGFSKSR*SEQWRP
Trigger: AGGCCTCCACTGCTCTGAGCACCTGCTCTTAGAGAA...CCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp CAGAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCTGTTACCCTCTCCTTaGCTGGGCTGGCTACTCTCA +
Preference number: 4 (lower is better)
Translates to: QRLAPFLMSPWVRRGPQNLLPSP*LGWLLS
Trigger: TGAGAGTAGCCAGCCCAGGCAAGGAGAGGGTAACAG...ATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp CCCAAAAGGAACAGGAAGCCCATGAGGGATACCTTTTCCGCTATCAGGAAGTCAGGGACCGCAAGCTCCTaGAGGAGGGGAGCAAGAGAG +
Preference number: 4 (lower is better)
Translates to: PKRNRKPMRDTFSAIRKSGTASS*RRGARE
Trigger: CTCTCTTGCTCCCCTCCTGCAGGAGCTTGCGGTCCC...TGACTTCCTGATAGCGGAAAAGGTATCCCTCATGGGCTTCCTGTTCCTTTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR GCA 90 bp AGTGCAGGGATCACTTTCTCCTGGGCAATGCACTGCAGGATGCGGGGAGCTCCACTGAGGCAGGAGAATTaGTTGAACTCGGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: SAGITFSWAMHCRMRGAPLRQEN*LNSGSR
Trigger: TCTGCTTCCCGAGTTCAAGCAATTCTCCTGCCTCAG...TGGAGCTCCCCGCATCCTGCAGTGCATTGCCCAGGAGAAAGTGATCCCTGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR GCA 90 bp CTCCCAGGAGGCAGCGGGCAACCTGTCAGAGATCTCGACAGGGAAAGAAGGAGGCTTATTGTGGCCCTCTaGACAAGCAATCTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: LPGGSGQPVRDLDRERRRLIVAL*TSNLVV
Trigger: CACAACCAGATTGCTTGTGCAGAGGGCCACAATAAG...CCTCCTTCTTTCCCTGTCGAGATCTCTGACAGGTTGCCCGCTGCCTCCTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR GCA 90 bp GATCACTTTCTCCTGGGCAATGCACTGCAGGATGCGGGGAGCTCCATAAAGTCCGAAGCTTCTTCGAGATaGCAACAGCTGCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: DHFLLGNALQDAGSSIKSEASSR*QQLPGS
Trigger: GCTCCCTGGCAGCTGTTGGCATCTCGAAGAAGCTTC...GGACTTTATGGAGCTCCCCGCATCCTGCAGTGCATTGCCCAGGAGAAAGTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR CCA 90 bp GCGATCCCGAGTGGCGAAGTCTGCATTCTCCTGGGTGAGCTGAGTCATCTCCATGGGATCACTTTCTCCTaGGCAATGCACTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: AIPSGEVCILLGELSHLHGITFS*AMHCRM
Trigger: CATCCTGCAGTGCATTGCCCAGGAGAAAGTGATCCC...ATGGAGATGACTCAGCTCACCCAGGAGAATGCAGACTTCGCCACTCGGGATCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR CCA 90 bp AGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTACATGGGACAGCTCCAAAAGCACGGGTGTTTTGTTTaGCCCCTTCCCTTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: SSTKVLSLGPLYMGQLQKHGCFV*PLPLSQ
Trigger: CTGGGACAAGGGAAGGGGCCAAACAAAACACCCGTG...CTTTTGGAGCTGTCCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp CAGAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATAGCTGGTCAGGCAGATaGCAGCCACGGGTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: QRLAPFLMSPWVRRGPQNSWSGR*QPRVFC
Trigger: ACAAAACACCCGTGGCTGCCATCTGCCTGACCAGCT...ATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp GGTGTCGTGTTGCAGAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGAGTCCCTTCGCTCTTaGAAGTCTGCTTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GVVLQRLAPFLMSPWVRRESLRS*KSACSS
Trigger: GCTGGAACAAGCAGACTTCCAAGAGCGAAGGGACTC...ACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTGCAACACGACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp CTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCAGATTCCAAGGTGAAGCCCTaGACTGGCCCGGCCAATGTA +
Preference number: 4 (lower is better)
Translates to: LAPFLMSPWVRRGPQNPDSKVKP*TGPANV
Trigger: TACATTGGCCGGGCCAGTCCAGGGCTTCACCTTGGA...ATCTGGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp GAAGGTCCTGAGCTTGGGTCCACTGTACATGGGACAGCTCCAAAAGAGGAAGGTTCCAAGGTGAAGCCCTaGACTGGCCCGGCCAATGTA +
Preference number: 4 (lower is better)
Translates to: EGPELGSTVHGTAPKEEGSKVKP*TGPANV
Trigger: TACATTGGCCGGGCCAGTCCAGGGCTTCACCTTGGA...ACCTTCCTCTTTTGGAGCTGTCCCATGTACAGTGGACCCAAGCTCAGGACCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp TATCAGGAAGTCATAGCGAAGGGCCTCTCGAGTGCAGATGGCGCCCAGGAGGAAGTAATCCCAGTACTTTaGGAGGCTGAGACGGGTGGA +
Preference number: 4 (lower is better)
Translates to: YQEVIAKGLSSADGAQEEVIPVL*EAETGG
Trigger: TCCACCCGTCTCAGCCTCCCAAAGTACTGGGATTAC...TTCCTCCTGGGCGCCATCTGCACTCGAGAGGCCCTTCGCTATGACTTCCTGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR CCA 90 bp AGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTACATGGGACAGCTCCAAAAGTTCCTGATGTCACCCTaGGTGAGACGTGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SSTKVLSLGPLYMGQLQKFLMSP*VRRGPQ
Trigger: CTGAGGACCACGTCTCACCCAGGGTGACATCAGGAA...CTTTTGGAGCTGTCCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR CAA 72 bp TCAGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTaGGGTCCACTGTACATGGGACAGCTCCAAAAGAGG +
Preference number: 4 (lower is better)
Translates to: SGWRSSSTKVLS*GPLYMGQLQKR
Trigger: CCTCTTTTGGAGCTGTCCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp TCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGTTGGCACAGGCTCCCACATaGACAGCTGGGTCTTCCACC +
Preference number: 4 (lower is better)
Translates to: SPASLSTCIELFRLGVVLAQAPT*TAGSST
Trigger: GGTGGAAGACCCAGCTGTTCATGTGGGAGCCTGTGC...CAACACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp CAGGCTGAGTCCCTTCGCTCTTGGAAGTCTGCTTGTTCCAGCAGGACTCCTGCCCGGGTGAATATCCAATaGAACCATGTTCTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: QAESLRSWKSACSSRTPARVNIQ*NHVLGP
Trigger: TGGACCCAGAACATGGTTTCATTGGATATTCACCCG...GGCAGGAGTCCTGCTGGAACAAGCAGACTTCCAAGAGCGAAGGGACTCAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR TCA 90 bp CAGAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATGGAACAGGAAGCCCATaGGGGATACCTTTTCCGCTA +
Preference number: 4 (lower is better)
Translates to: QRLAPFLMSPWVRRGPQNGTGSP*GIPFPL
Trigger: TAGCGGAAAAGGTATCCCTCATGGGCTTCCTGTTCC...ATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp CCTCCAAGACTCTTTGGGCAGGTCCCTCAGAGCCGTAACTGGGAGCTTTCTCTAGGAACAGGAAGCCCATaGGGGATACCTTTTCCGCTA +
Preference number: 4 (lower is better)
Translates to: PPRLFGQVPQSRNWELSLGTGSP*GIPFPL
Trigger: TAGCGGAAAAGGTATCCCTCATGGGCTTCCTGTTCC...TAGAGAAAGCTCCCAGTTACGGCTCTGAGGGACCTGCCCAAAGAGTCTTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR TCA 90 bp AGGAGGCAGCGGGCAACCTGTCAGAGATCTCGACAGGGAAAGAAGGAGGGGATTGTTAGCTGGAGGAGCTaGTCCATGTCCTTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: RRQRATCQRSRQGKKEGIVSWRS*SMSLVN
Trigger: ATTCACCAAGGACATGGATCAGCTCCTCCAGCTAAC...AATCCCCTCCTTCTTTCCCTGTCGAGATCTCTGACAGGTTGCCCGCTGCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR TCA 90 bp CCTCCAAGACTCTTTGGGCAGGTCCCTCAGAGCCGTAACTGGGAGCTTTCTCTATTCTCCACTGGACTCTaGTTGGTTGCACAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PPRLFGQVPQSRNWELSLFSTGL*LVAQLR
Trigger: CCTGAGCTGTGCAACCAATCAGAGTCCAGTGGAGAA...TAGAGAAAGCTCCCAGTTACGGCTCTGAGGGACCTGCCCAAAGAGTCTTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR TCA 90 bp AGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTACATGGGTCCACCGGAAAAAGCTaGAGTTGGAGGCTGATCCAA +
Preference number: 4 (lower is better)
Translates to: RLEKQLHEGPELGSTVHGSTGKS*SWRLIQ
Trigger: TTGGATCAGCCTCCAACTTCAGCTTTTTCCGGTGGA...CCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp CCCCCAACAGGGAGACCCAGGGGTTGCACATGTGGGTATAGAAAGAAGTGGATCTTCCATTGTCCAAAGTaGCAGCGGGAGGATGGGTCT +
Preference number: 4 (lower is better)
Translates to: PPTGRPRGCTCGYRKKWIFHCPK*QREDGS
Trigger: AGACCCATCCTCCCGCTGTCACTTTGGACAATGGAA...GATCCACTTCTTTCTATACCCACATGTGCAACCCCTGGGTCTCCCTGTTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR TCA 90 bp AGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTACATGGGACAGCTCCAAAAGGGCAGGAGAATTGCTTaGACTCGGGAAGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SSTKVLSLGPLYMGQLQKGRRIA*TREAEV
Trigger: AACCTCTGCTTCCCGAGTTCAAGCAATTCTCCTGCC...CTTTTGGAGCTGTCCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp TGGAGGCTGATCCAAGGTGAAGCCCTGGACTGGCCCGGCCAATGTAGAAATACAGGCAGGAGAATTGCTTaGACTCGGGAAGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: WRLIQGEALDWPGQCRNTGRRIA*TREAEV
Trigger: AACCTCTGCTTCCCGAGTTCAAGCAATTCTCCTGCC...TGTATTTCTACATTGGCCGGGCCAGTCCAGGGCTTCACCTTGGATCAGCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR TCA 90 bp CAAGCAATCTGGTTGTGCAGAGTCTTGGTGTCCCCTGCTAGTCTTAGTACCTGTGCCGGCCATGACTCCTaGAAGACACCCAGATGGGGA +
Preference number: 4 (lower is better)
Translates to: QAIWLCRVLVSPASLSTCAGHDS*KTPRWG
Trigger: TCCCCATCTGGGTGTCTTTCAGGAGTCATGGCCGGC...ACAGGTACTAAGACTAGCAGGGGACACCAAGACTCTGCACAACCAGATTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430155.6
CDS-3UTR GCA 90 bp TGTAGATTTCCATTGTCCAAAGTGACAGCGGGAGGATGGGTCTTGAGTTTCTCAAGTAGACGCCACCGCTaGCGATGCTGCTGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: CRFPLSKVTAGGWVLSFSSRRHR*RCCCAP
Trigger: GGGAGCGCAGCAGCATCGGCAGCGGTGGCGTCTACT...TGAGAAACTCAAGACCCATCCTCCCGCTGTCACTTTGGACAATGGAAATCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp TCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGTTGCGAGATGCCAACAGCTaGCAGGGAGCCCAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: SPASLSTCIELFRLGVVLRDANS*QGAQGN
Trigger: ATTCCCCTGGGCTCCCTGGCAGCTGTTGGCATCTCG...CAACACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp CAGAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCAATGCACTGCAGGATaGGGGGAGCTCCATAAAGTC +
Preference number: 4 (lower is better)
Translates to: QRLAPFLMSPWVRRGPQNQCTAG*GELHKV
Trigger: GACTTTATGGAGCTCCCCGCATCCTGCAGTGCATTG...ATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp GTGTCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGCTTTCTCCTGGGCAATaGACTGCAGGATGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: VSPASLSTCIELFRLGVVLSPGQ*TAGCGE
Trigger: CTCCCCGCATCCTGCAGTGCATTGCCCAGGAGAAAG...CACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp TGGAGGCTGATCCAAGGTGAAGCCCTGGACTGGCCCGGCCAATGTAGAAATACATCGCTCTTGGAAGTCTaGTTGTTCCAGCAGGACTCC +
Preference number: 4 (lower is better)
Translates to: WRLIQGEALDWPGQCRNTSLLEV*LFQQDS
Trigger: GGAGTCCTGCTGGAACAAGCAGACTTCCAAGAGCGA...TGTATTTCTACATTGGCCGGGCCAGTCCAGGGCTTCACCTTGGATCAGCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR GCA 90 bp GAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCCAAGCAATCTGGTTGTaGAGAGTCTTGGTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: EASTIPDVTLGETWSSESQAIWL*RVLVSP
Trigger: AGGGGACACCAAGACTCTGCACAACCAGATTGCTTG...GGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp GTGTCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGGGGATCCTGGTGATCTaGACAGGGAGACTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: VSPASLSTCIELFRLGVVGILVI*TGRLLW
Trigger: CCAGAGCAGTCTCCCTGTCCAGATCACCAGGATCCC...CACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393469.8
CDS-3UTR CCA 90 bp CAAGCAATCTGGTTGTGCAGAGTCTTGGTGTCCCCTGCTAGTCTTAGTACCTGTCCCTCCAAGACTCTTTaGGCAGGTCCCTCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: QAIWLCRVLVSPASLSTCPSKTL*AGPSEP
Trigger: CGGCTCTGAGGGACCTGCCCAAAGAGTCTTGGAGGG...ACAGGTACTAAGACTAGCAGGGGACACCAAGACTCTGCACAACCAGATTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp TTTCTCAGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTATCTCCTTGCCTGGGCTaGCTACTCTCAAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: FLRLEKQLHEGPELGSTVSPCLG*LLSSFL
Trigger: CAGGAAGCTTGAGAGTAGCCAGCCCAGGCAAGGAGA...TACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCTGAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp GGTGTCGTGTTGCAGAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTCTTGTAGGGTCTGCTTaGTGGCCTTCTTGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: GVVLQRLAPFLMSPWVRRLVGSA*WPSCFS
Trigger: GGAAAAGCAAGAAGGCCACCAAGCAGACCCTACAAG...ACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTGCAACACGACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp GAAGGTCCTGAGCTTGGGTCCACTGTACATGGGACAGCTCCAAAAGAGGAAGGTGGTGAAGCCCTGGACTaGCCCGGCCAATGTAGAAAT +
Preference number: 4 (lower is better)
Translates to: EGPELGSTVHGTAPKEEGGEALD*PGQCRN
Trigger: ATTTCTACATTGGCCGGGCCAGTCCAGGGCTTCACC...ACCTTCCTCTTTTGGAGCTGTCCCATGTACAGTGGACCCAAGCTCAGGACCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp TTTCTCAGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTAGGTGAAGCCCTGGACTaGCCCGGCCAATGTAGAAAT +
Preference number: 4 (lower is better)
Translates to: FLRLEKQLHEGPELGSTVGEALD*PGQCRN
Trigger: ATTTCTACATTGGCCGGGCCAGTCCAGGGCTTCACC...TACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCTGAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp TTTCTCAGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTAGGTAGCGATCCCGAGTaGCGAAGTCTGCATTCTCCT +
Preference number: 4 (lower is better)
Translates to: FLRLEKQLHEGPELGSTVGSDPE*RSLHSP
Trigger: AGGAGAATGCAGACTTCGCCACTCGGGATCGCTACC...TACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCTGAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp AGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTACATGGGACAGCTCCAAAAGGTAATCCCAGTACTTTaGGAGGCTGAGACGGGTGGA +
Preference number: 4 (lower is better)
Translates to: SSTKVLSLGPLYMGQLQKVIPVL*EAETGG
Trigger: TCCACCCGTCTCAGCCTCCCAAAGTACTGGGATTAC...CTTTTGGAGCTGTCCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp GAAGGTCCTGAGCTTGGGTCCACTGTACATGGGACAGCTCCAAAAGAGGAAGGTTTCCTGATGTCACCCTaGGTGAGACGTGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: EGPELGSTVHGTAPKEEGFLMSP*VRRGPQ
Trigger: CTGAGGACCACGTCTCACCCAGGGTGACATCAGGAA...ACCTTCCTCTTTTGGAGCTGTCCCATGTACAGTGGACCCAAGCTCAGGACCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp AGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTACATGGGGGTTGTGCAGAGTCTTaGTGTCCCCTGCTAGTCTTA +
Preference number: 4 (lower is better)
Translates to: RLEKQLHEGPELGSTVHGGCAES*CPLLVL
Trigger: TAAGACTAGCAGGGGACACCAAGACTCTGCACAACC...CCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp GAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCGGTTGTGCAGAGTCTTaGTGTCCCCTGCTAGTCTTA +
Preference number: 4 (lower is better)
Translates to: EASTIPDVTLGETWSSESGCAES*CPLLVL
Trigger: TAAGACTAGCAGGGGACACCAAGACTCTGCACAACC...GGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp AGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTACATGGGCAGGAACTGAGCAGGTaGAGAATAAGGATTGGAGGG +
Preference number: 4 (lower is better)
Translates to: RLEKQLHEGPELGSTVHGQELSR*RIRIGG
Trigger: CCCTCCAATCCTTATTCTCCACCTGCTCAGTTCCTG...CCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp GTGTCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGCAGAAGCACCGCAACTaGAATTCCTCGCACAGCCCA +
Preference number: 4 (lower is better)
Translates to: VSPASLSTCIELFRLGVVQKHRN*NSSHSP
Trigger: TGGGCTGTGCGAGGAATTTCAGTTGCGGTGCTTCTG...CACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp GAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCCGGGTGAATATCCAATaGAACCATGTTCTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: EASTIPDVTLGETWSSESRVNIQ*NHVLGP
Trigger: TGGACCCAGAACATGGTTTCATTGGATATTCACCCG...GGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp GGTGTCGTGTTGCAGAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGAGGAAGACGAAGATaGTGTACAGAAACCACGAGA +
Preference number: 4 (lower is better)
Translates to: GVVLQRLAPFLMSPWVRRGGRRR*CTETTR
Trigger: TCTCGTGGTTTCTGTACATCATCTTCGTCTTCCTCC...ACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTGCAACACGACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR TCA 90 bp GAAGGTCCTGAGCTTGGGTCCACTGTACATGGGACAGCTCCAAAAGAGGAAGGTGGAACAGGAAGCCCATaGGGGATACCTTTTCCGCTA +
Preference number: 4 (lower is better)
Translates to: EGPELGSTVHGTAPKEEGGTGSP*GIPFPL
Trigger: TAGCGGAAAAGGTATCCCTCATGGGCTTCCTGTTCC...ACCTTCCTCTTTTGGAGCTGTCCCATGTACAGTGGACCCAAGCTCAGGACCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp TTTCTCAGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTAGATCCATGTCCTTGGTaGATTCCAGTAGCGTGCCCT +
Preference number: 4 (lower is better)
Translates to: FLRLEKQLHEGPELGSTVDPCPW*IPVACP
Trigger: AGGGCACGCTACTGGAATTCACCAAGGACATGGATC...TACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCTGAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp TCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGTTGGCTGAAGTTGGAGGCTaGTCCAAGGTGAAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SPASLSTCIELFRLGVVLAEVGG*SKVKPW
Trigger: CCAGGGCTTCACCTTGGATCAGCCTCCAACTTCAGC...CAACACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp CTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCAGATTTCCATTGTCCAAAGTaGCAGCGGGAGGATGGGTCT +
Preference number: 4 (lower is better)
Translates to: LAPFLMSPWVRRGPQNPDFHCPK*QREDGS
Trigger: AGACCCATCCTCCCGCTGTCACTTTGGACAATGGAA...ATCTGGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp GTGTCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGTCATGGAAGAGCTCCTaGACCTGGGACATCTGGGTC +
Preference number: 4 (lower is better)
Translates to: VSPASLSTCIELFRLGVVSWKSS*TWDIWV
Trigger: GACCCAGATGTCCCAGGTGCAGGAGCTCTTCCATGA...CACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393469.8
ENST00000469902.6
CDS-3UTR GCA 90 bp GTTAACCAGGGTATACACCCACTGTATCACAAACATGATGAGAAGGGACCCAACGAAGGGCCTCTCGAGTaGAGATGGCGCCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: VNQGIHPLYHKHDEKGPNEGPLE*RWRPGG
Trigger: TCCTCCTGGGCGCCATCTGCACTCGAGAGGCCCTTC...GTTGGGTCCCTTCTCATCATGTTTGTGATACAGTGGGTGTATACCCTGGTTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR GCA 90 bp TCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGTTGCTTTCTCCTGGGCAATaGACTGCAGGATGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: SPASLSTCIELFRLGVVLLSPGQ*TAGCGE
Trigger: CTCCCCGCATCCTGCAGTGCATTGCCCAGGAGAAAG...CAACACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp GGAGAAGTAAGAGTAGTCCACTGCAACGTATGTCAGCATGAAGTTGATGGTGACGCACCGGGGTCAGGCTaGAGGAACACATGGACAGGG +
Preference number: 4 (lower is better)
Translates to: GEVRVVHCNVCQHEVDGDAPGSG*RNTWTG
Trigger: CCCTGTCCATGTGTTCCTGCAGCCTGACCCCGGTGC...GTCACCATCAACTTCATGCTGACATACGTTGCAGTGGACTACTCTTACTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR GCA 90 bp GAAGGTCCTGAGCTTGGGTCCACTGTACATGGGACAGCTCCAAAAGAGGAAGGTTTCTCTAAGAGCAGGTaGTCAGAGCAGTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: EGPELGSTVHGTAPKEEGFSKSR*SEQWRP
Trigger: AGGCCTCCACTGCTCTGAGCACCTGCTCTTAGAGAA...ACCTTCCTCTTTTGGAGCTGTCCCATGTACAGTGGACCCAAGCTCAGGACCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp CCTCTGCACAAGCAATCTGGTTGTGCAGAGTCTTGGTGTCCCCTGCTAGTCTTACTGTTACCCTCTCCTTaGCTGGGCTGGCTACTCTCA +
Preference number: 4 (lower is better)
Translates to: PLHKQSGCAESWCPLLVLLLPSP*LGWLLS
Trigger: TGAGAGTAGCCAGCCCAGGCAAGGAGAGGGTAACAG...TAAGACTAGCAGGGGACACCAAGACTCTGCACAACCAGATTGCTTGTGCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp GTGTCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGCTGTTACCCTCTCCTTaGCTGGGCTGGCTACTCTCA +
Preference number: 4 (lower is better)
Translates to: VSPASLSTCIELFRLGVVLLPSP*LGWLLS
Trigger: TGAGAGTAGCCAGCCCAGGCAAGGAGAGGGTAACAG...CACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp TTTCTCAGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTATCGCTCTTGGAAGTCTaGTTGTTCCAGCAGGACTCC +
Preference number: 4 (lower is better)
Translates to: FLRLEKQLHEGPELGSTVSLLEV*LFQQDS
Trigger: GGAGTCCTGCTGGAACAAGCAGACTTCCAAGAGCGA...TACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCTGAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp CCTCCAAGACTCTTTGGGCAGGTCCCTCAGAGCCGTAACTGGGAGCTTTCTCTACAAGCAATCTGGTTGTaGAGAGTCTTGGTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: PPRLFGQVPQSRNWELSLQAIWL*RVLVSP
Trigger: AGGGGACACCAAGACTCTGCACAACCAGATTGCTTG...TAGAGAAAGCTCCCAGTTACGGCTCTGAGGGACCTGCCCAAAGAGTCTTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR GCA 90 bp CCTCTGCACAAGCAATCTGGTTGTGCAGAGTCTTGGTGTCCCCTGCTAGTCTTAGCTCTGCGCATAGGCTaGTTTTCAATCTCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: PLHKQSGCAESWCPLLVLALRIG*FSISPG
Trigger: GCCAGGGGAGATTGAAAAGCAGCCTATGCGCAGAGC...TAAGACTAGCAGGGGACACCAAGACTCTGCACAACCAGATTGCTTGTGCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430155.6
CDS-3UTR CCA 90 bp TTTCTCAGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTATGCACCTGGGACATCTaGGTCATTCTCCAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: FLRLEKQLHEGPELGSTVCTWDI*VILQQA
Trigger: TGCTTGCTGGAGAATGACCCAGATGTCCCAGGTGCA...TACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCTGAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393469.8
ENST00000469902.6
CDS-3UTR CCA 90 bp AGAGCTCTTCAGACTGGGTGTCGTGTTGCAGAGGCTAGCACCATTCCTGATGTCGACTCCTGTAGCCGCTaGGAAGAAAACCCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: RALQTGCRVAEASTIPDVDSCSR*EENPKD
Trigger: GTCTTTGGGGTTTTCTTCCCAGCGGCTACAGGAGTC...GACATCAGGAATGGTGCTAGCCTCTGCAACACGACACCCAGTCTGAAGAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp TTTCTCAGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTAGGGATCACTTTCTCCTaGGCAATGCACTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: FLRLEKQLHEGPELGSTVGITFS*AMHCRM
Trigger: CATCCTGCAGTGCATTGCCCAGGAGAAAGTGATCCC...TACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCTGAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp AGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTACATGGGACAGCTCCAAAAGCAAAAACAAAGGCCATaGTCACCAAGCTGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: SSTKVLSLGPLYMGQLQKQKQRP*SPSWSG
Trigger: GCCTGACCAGCTTGGTGACCATGGCCTTTGTTTTTG...CTTTTGGAGCTGTCCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp CAGAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCTTGTAGGGTCTGCTTaGTGGCCTTCTTGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: QRLAPFLMSPWVRRGPQNLVGSA*WPSCFS
Trigger: GGAAAAGCAAGAAGGCCACCAAGCAGACCCTACAAG...ATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp TTTCTCAGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTAGAGTCCCTTCGCTCTTaGAAGTCTGCTTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: FLRLEKQLHEGPELGSTVESLRS*KSACSS
Trigger: GCTGGAACAAGCAGACTTCCAAGAGCGAAGGGACTC...TACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCTGAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp AGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTACATGGGCAGACATCTTGTTCTTaGAGCCTGGACTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RLEKQLHEGPELGSTVHGQTSCS*SLDFRK
Trigger: CTTCCTGAAGTCCAGGCTCCAAGAACAAGATGTCTG...CCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp GAAGGTCCTGAGCTTGGGTCCACTGTACATGGGACAGCTCCAAAAGAGGAAGGTGTGACAGCGGGAGGATaGGTCTTGAGTTTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: EGPELGSTVHGTAPKEEGVTAGG*VLSFSG
Trigger: ACCTGAGAAACTCAAGACCCATCCTCCCGCTGTCAC...ACCTTCCTCTTTTGGAGCTGTCCCATGTACAGTGGACCCAAGCTCAGGACCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp CTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCAGATGTGACAGCGGGAGGATaGGTCTTGAGTTTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: LAPFLMSPWVRRGPQNPDVTAGG*VLSFSG
Trigger: ACCTGAGAAACTCAAGACCCATCCTCCCGCTGTCAC...ATCTGGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp GAAGGTCCTGAGCTTGGGTCCACTGTACATGGGACAGCTCCAAAAGAGGAAGGTGTAATCCCAGTACTTTaGGAGGCTGAGACGGGTGGA +
Preference number: 4 (lower is better)
Translates to: EGPELGSTVHGTAPKEEGVIPVL*EAETGG
Trigger: TCCACCCGTCTCAGCCTCCCAAAGTACTGGGATTAC...ACCTTCCTCTTTTGGAGCTGTCCCATGTACAGTGGACCCAAGCTCAGGACCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR CAA 72 bp AGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGTaGCAGAGGCTAGCACCATTCCTGATGTCACCCTGG +
Preference number: 4 (lower is better)
Translates to: STCIELFRLGVV*QRLAPFLMSPW
Trigger: CCAGGGTGACATCAGGAATGGTGCTAGCCTCTGCAACACGACACCCAGTCTGAAGAGCTCTATACAGGTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp GAAGGTCCTGAGCTTGGGTCCACTGTACATGGGACAGCTCCAAAAGAGGAAGGTGTTAGCTGGAGGAGCTaGTCCATGTCCTTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: EGPELGSTVHGTAPKEEGVSWRS*SMSLVN
Trigger: ATTCACCAAGGACATGGATCAGCTCCTCCAGCTAAC...ACCTTCCTCTTTTGGAGCTGTCCCATGTACAGTGGACCCAAGCTCAGGACCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp CTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCAGATGTTAGCTGGAGGAGCTaGTCCATGTCCTTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: LAPFLMSPWVRRGPQNPDVSWRS*SMSLVN
Trigger: ATTCACCAAGGACATGGATCAGCTCCTCCAGCTAAC...ATCTGGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp TATCAGGAAGTCATAGCGAAGGGCCTCTCGAGTGCAGATGGCGCCCAGGAGGAATTGCTTTTCCTCTTCTaGCTTTCTGGGGTCCTGTTA +
Preference number: 4 (lower is better)
Translates to: YQEVIAKGLSSADGAQEELLFLF*LSGVLL
Trigger: TAACAGGACCCCAGAAAGTCAGAAGAGGAAAAGCAA...TTCCTCCTGGGCGCCATCTGCACTCGAGAGGCCCTTCGCTATGACTTCCTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR TCA 90 bp CCTCCAAGACTCTTTGGGCAGGTCCCTCAGAGCCGTAACTGGGAGCTTTCTCTAAAGAAGGAGGGGATTTaGGGTCCAAGAGGAAGCTAT +
Preference number: 4 (lower is better)
Translates to: PPRLFGQVPQSRNWELSLKKEGI*GPRGSY
Trigger: ATAGCTTCCTCTTGGACCTCAAATCCCCTCCTTCTT...TAGAGAAAGCTCCCAGTTACGGCTCTGAGGGACCTGCCCAAAGAGTCTTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR TCA 90 bp GAAGGTCCTGAGCTTGGGTCCACTGTACATGGGACAGCTCCAAAAGAGGAAGGTTCCACCGGAAAAAGCTaGAGTTGGAGGCTGATCCAA +
Preference number: 4 (lower is better)
Translates to: EGPELGSTVHGTAPKEEGSTGKS*SWRLIQ
Trigger: TTGGATCAGCCTCCAACTTCAGCTTTTTCCGGTGGA...ACCTTCCTCTTTTGGAGCTGTCCCATGTACAGTGGACCCAAGCTCAGGACCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp GTGTCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGCTGCATTCTCCTGGGTaGGCTGAGTCATCTCCATGT +
Preference number: 4 (lower is better)
Translates to: VSPASLSTCIELFRLGVVLHSPG*AESSPC
Trigger: ACATGGAGATGACTCAGCTCACCCAGGAGAATGCAG...CACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp GTGTCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGTTCCATTGTCCAAAGTaGCAGCGGGAGGATGGGTCT +
Preference number: 4 (lower is better)
Translates to: VSPASLSTCIELFRLGVVFHCPK*QREDGS
Trigger: AGACCCATCCTCCCGCTGTCACTTTGGACAATGGAA...CACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp CCTCCAAGACTCTTTGGGCAGGTCCCTCAGAGCCGTAACTGGGAGCTTTCTCTAACAGAAACCACCCAATaGAGGGCAGAGAAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: PPRLFGQVPQSRNWELSLTETTQ*RAEKLL
Trigger: AAGAAGCTTCTCTGCCCTTCATTGGGTGGTTTCTGT...TAGAGAAAGCTCCCAGTTACGGCTCTGAGGGACCTGCCCAAAGAGTCTTGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR TCA 90 bp TGGAGGCTGATCCAAGGTGAAGCCCTGGACTGGCCCGGCCAATGTAGAAATACAGGAGGAAGACGAAGATaGTGTACAGAAACCACCCAA +
Preference number: 4 (lower is better)
Translates to: WRLIQGEALDWPGQCRNTGGRRR*CTETTQ
Trigger: TTGGGTGGTTTCTGTACATCATCTTCGTCTTCCTCC...TGTATTTCTACATTGGCCGGGCCAGTCCAGGGCTTCACCTTGGATCAGCCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR GCA 90 bp TGTAGATTTCCATTGTCCAAAGTGACAGCGGGAGGATGGGTCTTGAGTTTCTCAGGCATCCTGCTGGGCTaGCTCATGGAAGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: CRFPLSKVTAGGWVLSFSGILLG*LMEELL
Trigger: CAGGAGCTCTTCCATGAGGCAGCCCAGCAGGATGCC...TGAGAAACTCAAGACCCATCCTCCCGCTGTCACTTTGGACAATGGAAATCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393469.8
ENST00000469902.6
CDS-3UTR GCA 90 bp CAGGTGGAGAATAAGGATTGGAGGGAGACTTTTCACTCTATATATCTTTTGGGTCGCTGCCGATGCTGCTaGGCTCCCCGACGCCAATGC +
Preference number: 4 (lower is better)
Translates to: QVENKDWRETFHSIYLLGRCRCC*APRRQC
Trigger: GCATTGGCGTCGGGGAGCGCAGCAGCATCGGCAGCG...ACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCCAATCCTTATTCTCCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp TGTAGATTTCCATTGTCCAAAGTGACAGCGGGAGGATGGGTCTTGAGTTTCTCATCCTGGGCAATGCACTaGAGGATGCGGGGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: CRFPLSKVTAGGWVLSFSSWAMH*RMRGAP
Trigger: TGGAGCTCCCCGCATCCTGCAGTGCATTGCCCAGGA...TGAGAAACTCAAGACCCATCCTCCCGCTGTCACTTTGGACAATGGAAATCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp GGAGAAGTAAGAGTAGTCCACTGCAACGTATGTCAGCATGAAGTTGATGGTGACTCCTGGGCAATGCACTaGAGGATGCGGGGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GEVRVVHCNVCQHEVDGDSWAMH*RMRGAP
Trigger: TGGAGCTCCCCGCATCCTGCAGTGCATTGCCCAGGA...GTCACCATCAACTTCATGCTGACATACGTTGCAGTGGACTACTCTTACTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR GCA 90 bp AGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTACATGGGACAGCTCCAAAAGCTATCTTGTAGGGTCTaGTTGGTGGCCTTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: SSTKVLSLGPLYMGQLQKLSCRV*LVAFLL
Trigger: AAGCAAGAAGGCCACCAAGCAGACCCTACAAGATAG...CTTTTGGAGCTGTCCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp GGTGAGCTGAGTCATCTCCATGTCAACCTTAGCCAGGGACGGCGCCAAGATGATCTATCTTGTAGGGTCTaGTTGGTGGCCTTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: GELSHLHVNLSQGRRQDDLSCRV*LVAFLL
Trigger: AAGCAAGAAGGCCACCAAGCAGACCCTACAAGATAG...ATCATCTTGGCGCCGTCCCTGGCTAAGGTTGACATGGAGATGACTCAGCTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR GCA 90 bp GCCCAAAAGGAACAGGAAGCCCATGAGGGATACCTTTTCCGCTATCAGGAAGTCGGGAGACCCAGGGGTTaGACATGTGGGTATAGAAAG +
Preference number: 4 (lower is better)
Translates to: AQKEQEAHEGYLFRYQEVGRPRG*TCGYRK
Trigger: CTTTCTATACCCACATGTGCAACCCCTGGGTCTCCC...GACTTCCTGATAGCGGAAAAGGTATCCCTCATGGGCTTCCTGTTCCTTTTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR CCA 90 bp TGTAGATTTCCATTGTCCAAAGTGACAGCGGGAGGATGGGTCTTGAGTTTCTCAGGACCGAGGAGATCATaGAGTAGACGCCACCGCTGC +
Preference number: 4 (lower is better)
Translates to: CRFPLSKVTAGGWVLSFSGPRRS*SRRHRC
Trigger: GCAGCGGTGGCGTCTACTCCATGATCTCCTCGGTCC...TGAGAAACTCAAGACCCATCCTCCCGCTGTCACTTTGGACAATGGAAATCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp TTCAGGAAGAAATCTTCTCCACTGGACTCTGATTGGTTGCACAGCTCAGGAACAGGACCGAGGAGATCATaGAGTAGACGCCACCGCTGC +
Preference number: 4 (lower is better)
Translates to: FRKKSSPLDSDWLHSSGTGPRRS*SRRHRC
Trigger: GCAGCGGTGGCGTCTACTCCATGATCTCCTCGGTCC...TGTTCCTGAGCTGTGCAACCAATCAGAGTCCAGTGGAGAAGATTTCTTCCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR CCA 90 bp GTGTCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGGACTCCTGTAGCCGCTaGGAAGAAAACCCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: VSPASLSTCIELFRLGVVDSCSR*EENPKD
Trigger: GTCTTTGGGGTTTTCTTCCCAGCGGCTACAGGAGTC...CACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp TGTAGATTTCCATTGTCCAAAGTGACAGCGGGAGGATGGGTCTTGAGTTTCTCACCTCTCGAGTGCAGATaGCGCCCAGGAGGAAGACGA +
Preference number: 4 (lower is better)
Translates to: CRFPLSKVTAGGWVLSFSPLECR*RPGGRR
Trigger: TCGTCTTCCTCCTGGGCGCCATCTGCACTCGAGAGG...TGAGAAACTCAAGACCCATCCTCCCGCTGTCACTTTGGACAATGGAAATCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp GTTAACCAGGGTATACACCCACTGTATCACAAACATGATGAGAAGGGACCCAACCCTCTCGAGTGCAGATaGCGCCCAGGAGGAAGACGA +
Preference number: 4 (lower is better)
Translates to: VNQGIHPLYHKHDEKGPNPLECR*RPGGRR
Trigger: TCGTCTTCCTCCTGGGCGCCATCTGCACTCGAGAGG...GTTGGGTCCCTTCTCATCATGTTTGTGATACAGTGGGTGTATACCCTGGTTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR CCA 90 bp TCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGTTGCACGGGTGTTTTGTTTaGCCCCTTCCCTTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: SPASLSTCIELFRLGVVLHGCFV*PLPLSQ
Trigger: CTGGGACAAGGGAAGGGGCCAAACAAAACACCCGTG...CAACACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp CAAGCAATCTGGTTGTGCAGAGTCTTGGTGTCCCCTGCTAGTCTTAGTACCTGTAGCTGGTCAGGCAGATaGCAGCCACGGGTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: QAIWLCRVLVSPASLSTCSWSGR*QPRVFC
Trigger: ACAAAACACCCGTGGCTGCCATCTGCCTGACCAGCT...ACAGGTACTAAGACTAGCAGGGGACACCAAGACTCTGCACAACCAGATTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp TTCAGGAAGAAATCTTCTCCACTGGACTCTGATTGGTTGCACAGCTCAGGAACACCCTCCAAGACTCTTTaGGCAGGTCCCTCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: FRKKSSPLDSDWLHSSGTPSKTL*AGPSEP
Trigger: CGGCTCTGAGGGACCTGCCCAAAGAGTCTTGGAGGG...TGTTCCTGAGCTGTGCAACCAATCAGAGTCCAGTGGAGAAGATTTCTTCCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR CCA 90 bp AGAGCTCTTCAGACTGGGTGTCGTGTTGCAGAGGCTAGCACCATTCCTGATGTCCCACTGGACTCTGATTaGTTGCACAGCTCAGGAACA +
Preference number: 4 (lower is better)
Translates to: RALQTGCRVAEASTIPDVPLDSD*LHSSGT
Trigger: TGTTCCTGAGCTGTGCAACCAATCAGAGTCCAGTGG...GACATCAGGAATGGTGCTAGCCTCTGCAACACGACACCCAGTCTGAAGAGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp CACTGTATCACAAACATGATGAGAAGGGACCCAACAGCCCCCAACAGGGAGACCCCACTGGACTCTGATTaGTTGCACAGCTCAGGAACA +
Preference number: 4 (lower is better)
Translates to: HCITNMMRRDPTAPNRETPLDSD*LHSSGT
Trigger: TGTTCCTGAGCTGTGCAACCAATCAGAGTCCAGTGG...GGTCTCCCTGTTGGGGGCTGTTGGGTCCCTTCTCATCATGTTTGTGATACAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR CCA 90 bp TTCCCTCAGGCTGAGTCCCTTCGCTCTTGGAAGTCTGCTTGTTCCAGCAGGACTCAGACATCTTGTTCTTaGAGCCTGGACTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: FPQAESLRSWKSACSSRTQTSCS*SLDFRK
Trigger: CTTCCTGAAGTCCAGGCTCCAAGAACAAGATGTCTG...AGTCCTGCTGGAACAAGCAGACTTCCAAGAGCGAAGGGACTCAGCCTGAGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR CCA 90 bp TCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGTTGGGTAGCGATCCCGAGTaGCGAAGTCTGCATTCTCCT +
Preference number: 4 (lower is better)
Translates to: SPASLSTCIELFRLGVVLGSDPE*RSLHSP
Trigger: AGGAGAATGCAGACTTCGCCACTCGGGATCGCTACC...CAACACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp AGAGCTCTTCAGACTGGGTGTCGTGTTGCAGAGGCTAGCACCATTCCTGATGTCTGGGTCCACTGTACATaGGACAGCTCCAAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: RALQTGCRVAEASTIPDVWVHCT*DSSKRG
Trigger: TCCTCTTTTGGAGCTGTCCCATGTACAGTGGACCCA...GACATCAGGAATGGTGCTAGCCTCTGCAACACGACACCCAGTCTGAAGAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp GTGTCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGGTGACAGCGGGAGGATaGGTCTTGAGTTTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: VSPASLSTCIELFRLGVVVTAGG*VLSFSG
Trigger: ACCTGAGAAACTCAAGACCCATCCTCCCGCTGTCAC...CACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp CCTCTGCACAAGCAATCTGGTTGTGCAGAGTCTTGGTGTCCCCTGCTAGTCTTAGTGACAGCGGGAGGATaGGTCTTGAGTTTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: PLHKQSGCAESWCPLLVLVTAGG*VLSFSG
Trigger: ACCTGAGAAACTCAAGACCCATCCTCCCGCTGTCAC...TAAGACTAGCAGGGGACACCAAGACTCTGCACAACCAGATTGCTTGTGCAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp CAGAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATTCTGCACAAGCAATCTaGTTGTGCAGAGTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: QRLAPFLMSPWVRRGPQNSAQAI*LCRVLV
Trigger: CACCAAGACTCTGCACAACCAGATTGCTTGTGCAGA...ATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp CACTGTATCACAAACATGATGAGAAGGGACCCAACAGCCCCCAACAGGGAGACCCAGGAACTGAGCAGGTaGAGAATAAGGATTGGAGGG +
Preference number: 4 (lower is better)
Translates to: HCITNMMRRDPTAPNRETQELSR*RIRIGG
Trigger: CCCTCCAATCCTTATTCTCCACCTGCTCAGTTCCTG...GGTCTCCCTGTTGGGGGCTGTTGGGTCCCTTCTCATCATGTTTGTGATACAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR TCA 90 bp CAAGCAATCTGGTTGTGCAGAGTCTTGGTGTCCCCTGCTAGTCTTAGTACCTGTGGAACAGGAAGCCCATaGGGGATACCTTTTCCGCTA +
Preference number: 4 (lower is better)
Translates to: QAIWLCRVLVSPASLSTCGTGSP*GIPFPL
Trigger: TAGCGGAAAAGGTATCCCTCATGGGCTTCCTGTTCC...ACAGGTACTAAGACTAGCAGGGGACACCAAGACTCTGCACAACCAGATTGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp AGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTACATGGGACAGCTCCAAAAGTTGCTTTTCCTCTTCTaGCTTTCTGGGGTCCTGTTA +
Preference number: 4 (lower is better)
Translates to: SSTKVLSLGPLYMGQLQKLLFLF*LSGVLL
Trigger: TAACAGGACCCCAGAAAGTCAGAAGAGGAAAAGCAA...CTTTTGGAGCTGTCCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp GGAGGGAGACTTTTCACTCTATATATCTTTTGGGTGTGGAAACATGTGAGTGTAGGGACGGCGCCAAGATaGTCTGCTCCTGAGGGGACC +
Preference number: 4 (lower is better)
Translates to: GGRLFTLYIFWVWKHVSVGTAPR*SAPEGT
Trigger: GGTCCCCTCAGGAGCAGATCATCTTGGCGCCGTCCC...TACACTCACATGTTTCCACACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp CAGGTGGAGAATAAGGATTGGAGGGAGACTTTTCACTCTATATATCTTTTGGGTGGGACGGCGCCAAGATaGTCTGCTCCTGAGGGGACC +
Preference number: 4 (lower is better)
Translates to: QVENKDWRETFHSIYLLGGTAPR*SAPEGT
Trigger: GGTCCCCTCAGGAGCAGATCATCTTGGCGCCGTCCC...ACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCCAATCCTTATTCTCCACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp CAGGTGGAGAATAAGGATTGGAGGGAGACTTTTCACTCTATATATCTTTTGGGTAGTAGACGCCACCGCTaGCGATGCTGCTGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: QVENKDWRETFHSIYLLGSRRHR*RCCCAP
Trigger: GGGAGCGCAGCAGCATCGGCAGCGGTGGCGTCTACT...ACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCCAATCCTTATTCTCCACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp CAGGTGGAGAATAAGGATTGGAGGGAGACTTTTCACTCTATATATCTTTTGGGTAGAGCAGCCCGATGGTaGCTCCCGTCTGCCCACCCA +
Preference number: 4 (lower is better)
Translates to: QVENKDWRETFHSIYLLGRAARW*LPSAHP
Trigger: TGGGTGGGCAGACGGGAGGCACCATCGGGCTGCTCT...ACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCCAATCCTTATTCTCCACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp AAACATACACTTATTGTGGCCCTCTGCACAAGCAATCTGGTTGTGCAGAGTCTTCGAGATGCCAACAGCTaGCAGGGAGCCCAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: KHTLIVALCTSNLVVQSLRDANS*QGAQGN
Trigger: ATTCCCCTGGGCTCCCTGGCAGCTGTTGGCATCTCG...AAGACTCTGCACAACCAGATTGCTTGTGCAGAGGGCCACAATAAGTGTATGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp TTCCCTCAGGCTGAGTCCCTTCGCTCTTGGAAGTCTGCTTGTTCCAGCAGGACTAGCTCAGGAACAAGTTaGTCTCCATATGTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: FPQAESLRSWKSACSSRTSSGTS*SPYVPS
Trigger: TGAGGGAACATATGGAGAGCAACTTGTTCCTGAGCT...AGTCCTGCTGGAACAAGCAGACTTCCAAGAGCGAAGGGACTCAGCCTGAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR CCA 90 bp CAGAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATAATGAAACCATGTTCTaGGTCCAGGTGGGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: QRLAPFLMSPWVRRGPQNNETMF*VQVGER
Trigger: TCTTTCACCCACCTGGACCCAGAACATGGTTTCATT...ATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp CCGAGTGGCGAAGTCTGCATTCTCCTGGGTGAGCTGAGTCATCTCCATGTCAACAATGAAACCATGTTCTaGGTCCAGGTGGGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: PSGEVCILLGELSHLHVNNETMF*VQVGER
Trigger: TCTTTCACCCACCTGGACCCAGAACATGGTTTCATT...GTTGACATGGAGATGACTCAGCTCACCCAGGAGAATGCAGACTTCGCCACTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR CCA 90 bp GTGTCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGCCTCAGAGCCGTAACTaGGAGCTTTCTCTAAGAGCA +
Preference number: 4 (lower is better)
Translates to: VSPASLSTCIELFRLGVVPQSRN*ELSLRA
Trigger: TGCTCTTAGAGAAAGCTCCCAGTTACGGCTCTGAGG...CACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp CTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCAGATCAGACATCTTGTTCTTaGAGCCTGGACTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LAPFLMSPWVRRGPQNPDQTSCS*SLDFRK
Trigger: CTTCCTGAAGTCCAGGCTCCAAGAACAAGATGTCTG...ATCTGGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR CAA 72 bp GAAGTTGATGGTGACGATGGGGGCCAGAACGTTCACTaGACCCACAAAAACAAAGGCCATGGTCACCAAGCT +
Preference number: 4 (lower is better)
Translates to: EVDGDDGGQNVH*THKNKGHGHQA
Trigger: AGCTTGGTGACCATGGCCTTTGTTTTTGTGGGTCAAGTGAACGTTCTGGCCCCCATCGTCACCATCAACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000473262.5
3UTR CAA 72 bp CTGTCAGAGATCTCGACAGGGAAAGAAGGAGGGGATTaGAGGTCCAAGAGGAAGCTATCTTGTAGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: LSEISTGKEGGD*RSKRKLSCRVC
Trigger: GCAGACCCTACAAGATAGCTTCCTCTTGGACCTCAAATCCCCTCCTTCTTTCCCTGTCGAGATCTCTGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR TCA 90 bp GTGTCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGATTCAGCAAAGCCGGTaGTATACATGGCACCTGCAA +
Preference number: 4 (lower is better)
Translates to: VSPASLSTCIELFRLGVVIQQSR*YTWHLQ
Trigger: TTGCAGGTGCCATGTATATCACCGGCTTTGCTGAAT...CACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393469.8
ENST00000469902.6
CDS-3UTR TCA 90 bp CCTTTTGATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATCTTCTGCGCCCTCCCTaGGCACCGGCTCAGGCACCG +
Preference number: 4 (lower is better)
Translates to: PFDPAIPLLGIYPRDTLYLLRPP*APAQAP
Trigger: CGGTGCCTGAGCCGGTGCTCAGGGAGGGCGCAGAAG...ATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATCAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR TCA 90 bp CCTCTGCACAAGCAATCTGGTTGTGCAGAGTCTTGGTGTCCCCTGCTAGTCTTAAAGAAGGAGGGGATTTaGGGTCCAAGAGGAAGCTAT +
Preference number: 4 (lower is better)
Translates to: PLHKQSGCAESWCPLLVLKKEGI*GPRGSY
Trigger: ATAGCTTCCTCTTGGACCTCAAATCCCCTCCTTCTT...TAAGACTAGCAGGGGACACCAAGACTCTGCACAACCAGATTGCTTGTGCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp GATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGCTTGCGGGACGGCGCCAAGATaGTCTGCTCCTGAGGGGACC +
Preference number: 4 (lower is better)
Translates to: DPAIPLLGIYPRDTLYACGTAPR*SAPEGT
Trigger: GGTCCCCTCAGGAGCAGATCATCTTGGCGCCGTCCC...GCAAGCATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR GCA 90 bp CTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCAGATGATATACATGGCACCTaGAACACACTGTCCAAACAC +
Preference number: 4 (lower is better)
Translates to: LAPFLMSPWVRRGPQNPDDIHGT*NTLSKH
Trigger: GTGTTTGGACAGTGTGTTGCAGGTGCCATGTATATC...ATCTGGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393469.8
ENST00000469902.6
CDS-3UTR GCA 90 bp GAAGGTCCTGAGCTTGGGTCCACTGTACATGGGACAGCTCCAAAAGAGGAAGGTGATATACATGGCACCTaGAACACACTGTCCAAACAC +
Preference number: 4 (lower is better)
Translates to: EGPELGSTVHGTAPKEEGDIHGT*NTLSKH
Trigger: GTGTTTGGACAGTGTGTTGCAGGTGCCATGTATATC...ACCTTCCTCTTTTGGAGCTGTCCCATGTACAGTGGACCCAAGCTCAGGACCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393469.8
ENST00000469902.6
CDS-3UTR GCA 90 bp TTTCTCAGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTATATCCATTTGACACCTaGGAGGTTAATGCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: FLRLEKQLHEGPELGSTVYPFDT*EVNAQQ
Trigger: TTGCTGGGCATTAACCTCGCAGGTGTCAAATGGATA...TACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCTGAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp CTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCAGATTATCCATTTGACACCTaGGAGGTTAATGCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: LAPFLMSPWVRRGPQNPDYPFDT*EVNAQQ
Trigger: TTGCTGGGCATTAACCTCGCAGGTGTCAAATGGATA...ATCTGGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp AGAGCTCTTCAGACTGGGTGTCGTGTTGCAGAGGCTAGCACCATTCCTGATGTCTATCCATTTGACACCTaGGAGGTTAATGCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: RALQTGCRVAEASTIPDVYPFDT*EVNAQQ
Trigger: TTGCTGGGCATTAACCTCGCAGGTGTCAAATGGATA...GACATCAGGAATGGTGCTAGCCTCTGCAACACGACACCCAGTCTGAAGAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp CAGGTGGAGAATAAGGATTGGAGGGAGACTTTTCACTCTATATATCTTTTGGGTGCACCGGGGTCAGGCTaGAGGAACACATGGACAGGG +
Preference number: 4 (lower is better)
Translates to: QVENKDWRETFHSIYLLGAPGSG*RNTWTG
Trigger: CCCTGTCCATGTGTTCCTGCAGCCTGACCCCGGTGC...ACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCCAATCCTTATTCTCCACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp GGAGGGAGACTTTTCACTCTATATATCTTTTGGGTGTGGAAACATGTGAGTGTACATAGAGCAGCCCGATaGTGCCTCCCGTCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: GGRLFTLYIFWVWKHVSVHRAAR*CLPSAH
Trigger: GTGGGCAGACGGGAGGCACCATCGGGCTGCTCTATG...TACACTCACATGTTTCCACACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp CAGGTGGAGAATAAGGATTGGAGGGAGACTTTTCACTCTATATATCTTTTGGGTAGGTGCTCAGAGCAGTaGAGGCCTTCTGCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: QVENKDWRETFHSIYLLGRCSEQ*RPSAPS
Trigger: GGAGGGCGCAGAAGGCCTCCACTGCTCTGAGCACCT...ACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCCAATCCTTATTCTCCACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp GGAGGGAGACTTTTCACTCTATATATCTTTTGGGTGTGGAAACATGTGAGTGTAAGGTGCTCAGAGCAGTaGAGGCCTTCTGCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: GGRLFTLYIFWVWKHVSVRCSEQ*RPSAPS
Trigger: GGAGGGCGCAGAAGGCCTCCACTGCTCTGAGCACCT...TACACTCACATGTTTCCACACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp TCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGTTGCCACTGGACTCTGATTaGTTGCACAGCTCAGGAACA +
Preference number: 4 (lower is better)
Translates to: SPASLSTCIELFRLGVVLPLDSD*LHSSGT
Trigger: TGTTCCTGAGCTGTGCAACCAATCAGAGTCCAGTGG...CAACACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp GGAGAAGTAAGAGTAGTCCACTGCAACGTATGTCAGCATGAAGTTGATGGTGACGGTAGCGATCCCGAGTaGCGAAGTCTGCATTCTCCT +
Preference number: 4 (lower is better)
Translates to: GEVRVVHCNVCQHEVDGDGSDPE*RSLHSP
Trigger: AGGAGAATGCAGACTTCGCCACTCGGGATCGCTACC...GTCACCATCAACTTCATGCTGACATACGTTGCAGTGGACTACTCTTACTTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR CCA 90 bp CCGAGTGGCGAAGTCTGCATTCTCCTGGGTGAGCTGAGTCATCTCCATGTCAACAACATACACTTATTGTaGCCCTCTGCACAAGCAATC +
Preference number: 4 (lower is better)
Translates to: PSGEVCILLGELSHLHVNNIHLL*PSAQAI
Trigger: GATTGCTTGTGCAGAGGGCCACAATAAGTGTATGTT...GTTGACATGGAGATGACTCAGCTCACCCAGGAGAATGCAGACTTCGCCACTCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR TCA 90 bp GGAGGGAGACTTTTCACTCTATATATCTTTTGGGTGTGGAAACATGTGAGTGTACGAGGGCCACCAGGATaGCGAAGGACACCAGGAACA +
Preference number: 4 (lower is better)
Translates to: GGRLFTLYIFWVWKHVSVRGPPG*RRTPGT
Trigger: TGTTCCTGGTGTCCTTCGTCATCCTGGTGGCCCTCG...TACACTCACATGTTTCCACACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp AGAGCTGATTGTCATTGCAAAAGATTGGAAAGAATCCAAATGCTCATCATTGTGGAGGCTGATCCAAGGTaGAGCCCTGGACTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: RADCHCKRLERIQMLIIVEADPR*SPGLAR
Trigger: CCGGGCCAGTCCAGGGCTTCACCTTGGATCAGCCTC...CACAATGATGAGCATTTGGATTCTTTCCAATCTTTTGCAATGACAATCAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR TCA 90 bp GAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCAATGCATGTACCTTTTaGTCCTGCAATTCCACTTTT +
Preference number: 4 (lower is better)
Translates to: EASTIPDVTLGETWSSESNACTF*SCNSTF
Trigger: AAAAGTGGAATTGCAGGATCAAAAGGTACATGCATT...GGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR GCA 90 bp CAGGTGGAGAATAAGGATTGGAGGGAGACTTTTCACTCTATATATCTTTTGGGTCGAGATGCCAACAGCTaGCAGGGAGCCCAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: QVENKDWRETFHSIYLLGRDANS*QGAQGN
Trigger: ATTCCCCTGGGCTCCCTGGCAGCTGTTGGCATCTCG...ACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCCAATCCTTATTCTCCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp AAACATACACTTATTGTGGCCCTCTGCACAAGCAATCTGGTTGTGCAGAGTCTTACAGAAACCACGAGATaGCAACAGCTGCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: KHTLIVALCTSNLVVQSLTETTR*QQLPGS
Trigger: GCTCCCTGGCAGCTGTTGGCATCTCGTGGTTTCTGT...AAGACTCTGCACAACCAGATTGCTTGTGCAGAGGGCCACAATAAGTGTATGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR GCA 90 bp TGTAGATTTCCATTGTCCAAAGTGACAGCGGGAGGATGGGTCTTGAGTTTCTCACAATGCACTGCAGGATaGGGGGAGCTCCATAAAGTC +
Preference number: 4 (lower is better)
Translates to: CRFPLSKVTAGGWVLSFSQCTAG*GELHKV
Trigger: GACTTTATGGAGCTCCCCGCATCCTGCAGTGCATTG...TGAGAAACTCAAGACCCATCCTCCCGCTGTCACTTTGGACAATGGAAATCTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp GGAGAAGTAAGAGTAGTCCACTGCAACGTATGTCAGCATGAAGTTGATGGTGACCAATGCACTGCAGGATaGGGGGAGCTCCATAAAGTC +
Preference number: 4 (lower is better)
Translates to: GEVRVVHCNVCQHEVDGDQCTAG*GELHKV
Trigger: GACTTTATGGAGCTCCCCGCATCCTGCAGTGCATTG...GTCACCATCAACTTCATGCTGACATACGTTGCAGTGGACTACTCTTACTTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR GCA 90 bp TTTCTCAGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTAGTAAGAGTAGTCCACTaGAACGTATGTCAGCATGAA +
Preference number: 4 (lower is better)
Translates to: FLRLEKQLHEGPELGSTVVRVVH*NVCQHE
Trigger: TTCATGCTGACATACGTTGCAGTGGACTACTCTTAC...TACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCTGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp GATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGCTTGCGCACCGGGGTCAGGCTaGAGGAACACATGGACAGGG +
Preference number: 4 (lower is better)
Translates to: DPAIPLLGIYPRDTLYACAPGSG*RNTWTG
Trigger: CCCTGTCCATGTGTTCCTGCAGCCTGACCCCGGTGC...GCAAGCATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR GCA 90 bp TGTAGATTTCCATTGTCCAAAGTGACAGCGGGAGGATGGGTCTTGAGTTTCTCAGGGAGACCCAGGGGTTaGACATGTGGGTATAGAAAG +
Preference number: 4 (lower is better)
Translates to: CRFPLSKVTAGGWVLSFSGRPRG*TCGYRK
Trigger: CTTTCTATACCCACATGTGCAACCCCTGGGTCTCCC...TGAGAAACTCAAGACCCATCCTCCCGCTGTCACTTTGGACAATGGAAATCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp AGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTACATGGGTACAAGATTATTCACTaGAGAGCTGATTGTCATTGC +
Preference number: 4 (lower is better)
Translates to: RLEKQLHEGPELGSTVHGYKIIH*RADCHC
Trigger: GCAATGACAATCAGCTCTGCAGTGAATAATCTTGTA...CCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CCA 90 bp CAGGTGGAGAATAAGGATTGGAGGGAGACTTTTCACTCTATATATCTTTTGGGTGGACCGAGGAGATCATaGAGTAGACGCCACCGCTGC +
Preference number: 4 (lower is better)
Translates to: QVENKDWRETFHSIYLLGGPRRS*SRRHRC
Trigger: GCAGCGGTGGCGTCTACTCCATGATCTCCTCGGTCC...ACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCCAATCCTTATTCTCCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp GTTAACCAGGGTATACACCCACTGTATCACAAACATGATGAGAAGGGACCCAACGAGTCCCTTCGCTCTTaGAAGTCTGCTTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: VNQGIHPLYHKHDEKGPNESLRS*KSACSS
Trigger: GCTGGAACAAGCAGACTTCCAAGAGCGAAGGGACTC...GTTGGGTCCCTTCTCATCATGTTTGTGATACAGTGGGTGTATACCCTGGTTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR CCA 90 bp CTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCAGATAGAAATCTTCTCCACTaGACTCTGATTGGTTGCACA +
Preference number: 4 (lower is better)
Translates to: LAPFLMSPWVRRGPQNPDRNLLH*TLIGCT
Trigger: TGTGCAACCAATCAGAGTCCAGTGGAGAAGATTTCT...ATCTGGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp CAAGCAATCTGGTTGTGCAGAGTCTTGGTGTCCCCTGCTAGTCTTAGTACCTGTCAGACATCTTGTTCTTaGAGCCTGGACTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QAIWLCRVLVSPASLSTCQTSCS*SLDFRK
Trigger: CTTCCTGAAGTCCAGGCTCCAAGAACAAGATGTCTG...ACAGGTACTAAGACTAGCAGGGGACACCAAGACTCTGCACAACCAGATTGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp CTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCAGATAACATACACTTATTGTaGCCCTCTGCACAAGCAATC +
Preference number: 4 (lower is better)
Translates to: LAPFLMSPWVRRGPQNPDNIHLL*PSAQAI
Trigger: GATTGCTTGTGCAGAGGGCCACAATAAGTGTATGTT...ATCTGGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp TTTCTCAGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTAAACATACACTTATTGTaGCCCTCTGCACAAGCAATC +
Preference number: 4 (lower is better)
Translates to: FLRLEKQLHEGPELGSTVNIHLL*PSAQAI
Trigger: GATTGCTTGTGCAGAGGGCCACAATAAGTGTATGTT...TACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCTGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp AGAGCTCTTCAGACTGGGTGTCGTGTTGCAGAGGCTAGCACCATTCCTGATGTCGTGGAGAATAAGGATTaGAGGGAGACTTTTCACTCT +
Preference number: 4 (lower is better)
Translates to: RALQTGCRVAEASTIPDVVENKD*RETFHS
Trigger: AGAGTGAAAAGTCTCCCTCCAATCCTTATTCTCCAC...GACATCAGGAATGGTGCTAGCCTCTGCAACACGACACCCAGTCTGAAGAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
3UTR CAA 72 bp ATACACTTATTGTGGCCCTCTGCACAAGCAATCTGGTaGTGCAGAGTCTTGGTGTCCCCTGCTAGTCTTAGT +
Preference number: 4 (lower is better)
Translates to: IHLLWPSAQAIW*CRVLVSPASLS
Trigger: ACTAAGACTAGCAGGGGACACCAAGACTCTGCACAACCAGATTGCTTGTGCAGAGGGCCACAATAAGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp TTTGATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGCTGGGACGGCGCCAAGATaGTCTGCTCCTGAGGGGACC +
Preference number: 4 (lower is better)
Translates to: FDPAIPLLGIYPRDTLYAGTAPR*SAPEGT
Trigger: GGTCCCCTCAGGAGCAGATCATCTTGGCGCCGTCCC...AGCATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR TCA 90 bp AGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTACATGGGACAGCTCCAAAAGTATTCACTGCAGAGCTaGTTGTCATTGCAAAAGATT +
Preference number: 4 (lower is better)
Translates to: SSTKVLSLGPLYMGQLQKYSLQS*LSLQKI
Trigger: AATCTTTTGCAATGACAATCAGCTCTGCAGTGAATA...CTTTTGGAGCTGTCCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR TCA 90 bp GATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGCTTGCAGATGGGGAATGGGGTaGGCAGCCTCCTCCACGCAT +
Preference number: 4 (lower is better)
Translates to: DPAIPLLGIYPRDTLYACRWGMG*AASSTH
Trigger: ATGCGTGGAGGAGGCTGCTCACCCCATTCCCCATCT...GCAAGCATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430155.6
CDS-3UTR GCA 90 bp CCTTTTGATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATATGGTGCCTCCCGTCTaGCCACCCAGGACCGAGGAG +
Preference number: 4 (lower is better)
Translates to: PFDPAIPLLGIYPRDTLYMVPPV*PPRTEE
Trigger: CTCCTCGGTCCTGGGTGGGCAGACGGGAGGCACCAT...ATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATCAAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393469.8
ENST00000469902.6
CDS-3UTR GCA 90 bp AGAGCTGATTGTCATTGCAAAAGATTGGAAAGAATCCAAATGCTCATCATTGTGGAAGGGCCTCTCGAGTaGAGATGGCGCCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: RADCHCKRLERIQMLIIVEGPLE*RWRPGG
Trigger: TCCTCCTGGGCGCCATCTGCACTCGAGAGGCCCTTC...CACAATGATGAGCATTTGGATTCTTTCCAATCTTTTGCAATGACAATCAGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR GCA 90 bp TCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGTTGAGCTCAGGAACAAGTTaGTCTCCATATGTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: SPASLSTCIELFRLGVVLSSGTS*SPYVPS
Trigger: TGAGGGAACATATGGAGAGCAACTTGTTCCTGAGCT...CAACACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp AGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTACATGGGAGAGCTGATTGTCATTaGAAAAGATTGGAAAGAATC +
Preference number: 4 (lower is better)
Translates to: RLEKQLHEGPELGSTVHGRADCH*KRLERI
Trigger: GATTCTTTCCAATCTTTTGCAATGACAATCAGCTCT...CCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR GCA 90 bp GAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCAGAGCTGATTGTCATTaGAAAAGATTGGAAAGAATC +
Preference number: 4 (lower is better)
Translates to: EASTIPDVTLGETWSSESRADCH*KRLERI
Trigger: GATTCTTTCCAATCTTTTGCAATGACAATCAGCTCT...GGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CCA 90 bp GGAGAAGTAAGAGTAGTCCACTGCAACGTATGTCAGCATGAAGTTGATGGTGACCAAAAACAAAGGCCATaGTCACCAAGCTGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: GEVRVVHCNVCQHEVDGDQKQRP*SPSWSG
Trigger: GCCTGACCAGCTTGGTGACCATGGCCTTTGTTTTTG...GTCACCATCAACTTCATGCTGACATACGTTGCAGTGGACTACTCTTACTTCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR CCA 90 bp TGTAGATTTCCATTGTCCAAAGTGACAGCGGGAGGATGGGTCTTGAGTTTCTCACCTCAGAGCCGTAACTaGGAGCTTTCTCTAAGAGCA +
Preference number: 4 (lower is better)
Translates to: CRFPLSKVTAGGWVLSFSPQSRN*ELSLRA
Trigger: TGCTCTTAGAGAAAGCTCCCAGTTACGGCTCTGAGG...TGAGAAACTCAAGACCCATCCTCCCGCTGTCACTTTGGACAATGGAAATCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp TTCAGGAAGAAATCTTCTCCACTGGACTCTGATTGGTTGCACAGCTCAGGAACACCTCAGAGCCGTAACTaGGAGCTTTCTCTAAGAGCA +
Preference number: 4 (lower is better)
Translates to: FRKKSSPLDSDWLHSSGTPQSRN*ELSLRA
Trigger: TGCTCTTAGAGAAAGCTCCCAGTTACGGCTCTGAGG...TGTTCCTGAGCTGTGCAACCAATCAGAGTCCAGTGGAGAAGATTTCTTCCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR CCA 90 bp TGTAGATTTCCATTGTCCAAAGTGACAGCGGGAGGATGGGTCTTGAGTTTCTCACCACTGGACTCTGATTaGTTGCACAGCTCAGGAACA +
Preference number: 4 (lower is better)
Translates to: CRFPLSKVTAGGWVLSFSPLDSD*LHSSGT
Trigger: TGTTCCTGAGCTGTGCAACCAATCAGAGTCCAGTGG...TGAGAAACTCAAGACCCATCCTCCCGCTGTCACTTTGGACAATGGAAATCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp GTGTCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGAGAAATCTTCTCCACTaGACTCTGATTGGTTGCACA +
Preference number: 4 (lower is better)
Translates to: VSPASLSTCIELFRLGVVRNLLH*TLIGCT
Trigger: TGTGCAACCAATCAGAGTCCAGTGGAGAAGATTTCT...CACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp CATGTTAACCAGGGTATACACCCACTGTATCACAAACATGATGAGAAGGGACCCTGGGTCCACTGTACATaGGACAGCTCCAAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: HVNQGIHPLYHKHDEKGPWVHCT*DSSKRG
Trigger: TCCTCTTTTGGAGCTGTCCCATGTACAGTGGACCCA...GGGTCCCTTCTCATCATGTTTGTGATACAGTGGGTGTATACCCTGGTTAACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR CCA 90 bp GTGTCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGAACATACACTTATTGTaGCCCTCTGCACAAGCAATC +
Preference number: 4 (lower is better)
Translates to: VSPASLSTCIELFRLGVVNIHLL*PSAQAI
Trigger: GATTGCTTGTGCAGAGGGCCACAATAAGTGTATGTT...CACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp TATCAGGAAGTCATAGCGAAGGGCCTCTCGAGTGCAGATGGCGCCCAGGAGGAAACTCTATATATCTTTTaGGTGTGGAAACATGTGAGT +
Preference number: 4 (lower is better)
Translates to: YQEVIAKGLSSADGAQEETLYIF*VWKHVS
Trigger: ACTCACATGTTTCCACACCCAAAAGATATATAGAGT...TTCCTCCTGGGCGCCATCTGCACTCGAGAGGCCCTTCGCTATGACTTCCTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR TCA 90 bp GAAGGTCCTGAGCTTGGGTCCACTGTACATGGGACAGCTCCAAAAGAGGAAGGTAATGCATGTACCTTTTaGTCCTGCAATTCCACTTTT +
Preference number: 4 (lower is better)
Translates to: EGPELGSTVHGTAPKEEGNACTF*SCNSTF
Trigger: AAAAGTGGAATTGCAGGATCAAAAGGTACATGCATT...ACCTTCCTCTTTTGGAGCTGTCCCATGTACAGTGGACCCAAGCTCAGGACCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR GCA 90 bp GATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGCTTGCCTTTCTCCTGGGCAATaGACTGCAGGATGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: DPAIPLLGIYPRDTLYACLSPGQ*TAGCGE
Trigger: CTCCCCGCATCCTGCAGTGCATTGCCCAGGAGAAAG...GCAAGCATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR GCA 90 bp CCTTTTGATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGGGACCGCAAGCTCCTaGAGGAGGGGAGCAAGAGAG +
Preference number: 4 (lower is better)
Translates to: PFDPAIPLLGIYPRDTLYGTASS*RRGARE
Trigger: CTCTCTTGCTCCCCTCCTGCAGGAGCTTGCGGTCCC...ATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATCAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR GCA 90 bp ATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTGGGACCGCAAGCTCCTaGAGGAGGGGAGCAAGAGAG +
Preference number: 4 (lower is better)
Translates to: IHFMLAHLYKIIHCRADCGTASS*RRGARE
Trigger: CTCTCTTGCTCCCCTCCTGCAGGAGCTTGCGGTCCC...ACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR GCA 90 bp TGTAGATTTCCATTGTCCAAAGTGACAGCGGGAGGATGGGTCTTGAGTTTCTCACTTATTGTGGCCCTCTaGACAAGCAATCTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: CRFPLSKVTAGGWVLSFSLIVAL*TSNLVV
Trigger: CACAACCAGATTGCTTGTGCAGAGGGCCACAATAAG...TGAGAAACTCAAGACCCATCCTCCCGCTGTCACTTTGGACAATGGAAATCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp CAGGTGGAGAATAAGGATTGGAGGGAGACTTTTCACTCTATATATCTTTTGGGTTCTCCTTGCCTGGGCTaGCTACTCTCAAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: QVENKDWRETFHSIYLLGSPCLG*LLSSFL
Trigger: CAGGAAGCTTGAGAGTAGCCAGCCCAGGCAAGGAGA...ACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCCAATCCTTATTCTCCACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp GCCCAAAAGGAACAGGAAGCCCATGAGGGATACCTTTTCCGCTATCAGGAAGTCGGGTATAGAAAGAAGTaGATCTTCTCCAGACATCTT +
Preference number: 4 (lower is better)
Translates to: AQKEQEAHEGYLFRYQEVGYRKK*IFSRHL
Trigger: AAGATGTCTGGAGAAGATCCACTTCTTTCTATACCC...GACTTCCTGATAGCGGAAAAGGTATCCCTCATGGGCTTCCTGTTCCTTTTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR CCA 90 bp CAGGTGGAGAATAAGGATTGGAGGGAGACTTTTCACTCTATATATCTTTTGGGTGGTGAAGCCCTGGACTaGCCCGGCCAATGTAGAAAT +
Preference number: 4 (lower is better)
Translates to: QVENKDWRETFHSIYLLGGEALD*PGQCRN
Trigger: ATTTCTACATTGGCCGGGCCAGTCCAGGGCTTCACC...ACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCCAATCCTTATTCTCCACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp TGTAGATTTCCATTGTCCAAAGTGACAGCGGGAGGATGGGTCTTGAGTTTCTCATCTGCACAAGCAATCTaGTTGTGCAGAGTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: CRFPLSKVTAGGWVLSFSSAQAI*LCRVLV
Trigger: CACCAAGACTCTGCACAACCAGATTGCTTGTGCAGA...TGAGAAACTCAAGACCCATCCTCCCGCTGTCACTTTGGACAATGGAAATCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp CAGAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATACTCTATATATCTTTTaGGTGTGGAAACATGTGAGT +
Preference number: 4 (lower is better)
Translates to: QRLAPFLMSPWVRRGPQNTLYIF*VWKHVS
Trigger: ACTCACATGTTTCCACACCCAAAAGATATATAGAGT...ATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp AAACATACACTTATTGTGGCCCTCTGCACAAGCAATCTGGTTGTGCAGAGTCTTCAGGAACTGAGCAGGTaGAGAATAAGGATTGGAGGG +
Preference number: 4 (lower is better)
Translates to: KHTLIVALCTSNLVVQSLQELSR*RIRIGG
Trigger: CCCTCCAATCCTTATTCTCCACCTGCTCAGTTCCTG...AAGACTCTGCACAACCAGATTGCTTGTGCAGAGGGCCACAATAAGTGTATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp AGAGCTGATTGTCATTGCAAAAGATTGGAAAGAATCCAAATGCTCATCATTGTGCACCCAGATGGGGAATaGGGTGAGCAGCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RADCHCKRLERIQMLIIVHPDGE*GEQPPP
Trigger: TGGAGGAGGCTGCTCACCCCATTCCCCATCTGGGTG...CACAATGATGAGCATTTGGATTCTTTCCAATCTTTTGCAATGACAATCAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430155.6
CDS-3UTR TCA 90 bp ACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTCATTGCACAGGCTCCCACATaGACAGCTGGGTCTTCCACC +
Preference number: 4 (lower is better)
Translates to: TLCLHICTRLFTAELIVIAQAPT*TAGSST
Trigger: GGTGGAAGACCCAGCTGTTCATGTGGGAGCCTGTGC...AATGACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393469.8
ENST00000469902.6
CDS-3UTR TCA 90 bp TTTGATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGCTCGAGGGCCACCAGGATaGCGAAGGACACCAGGAACA +
Preference number: 4 (lower is better)
Translates to: FDPAIPLLGIYPRDTLYARGPPG*RRTPGT
Trigger: TGTTCCTGGTGTCCTTCGTCATCCTGGTGGCCCTCG...AGCATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393469.8
ENST00000469902.6
CDS-3UTR TCA 90 bp TGTAGATTTCCATTGTCCAAAGTGACAGCGGGAGGATGGGTCTTGAGTTTCTCATTGCTTTTCCTCTTCTaGCTTTCTGGGGTCCTGTTA +
Preference number: 4 (lower is better)
Translates to: CRFPLSKVTAGGWVLSFSLLFLF*LSGVLL
Trigger: TAACAGGACCCCAGAAAGTCAGAAGAGGAAAAGCAA...TGAGAAACTCAAGACCCATCCTCCCGCTGTCACTTTGGACAATGGAAATCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp GGAGGGAGACTTTTCACTCTATATATCTTTTGGGTGTGGAAACATGTGAGTGTATTCTCCACTGGACTCTaGTTGGTTGCACAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GGRLFTLYIFWVWKHVSVFSTGL*LVAQLR
Trigger: CCTGAGCTGTGCAACCAATCAGAGTCCAGTGGAGAA...TACACTCACATGTTTCCACACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp CAGGTGGAGAATAAGGATTGGAGGGAGACTTTTCACTCTATATATCTTTTGGGTCGGGAGGATGGGTCTTaGGTTTCTCAGGTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: QVENKDWRETFHSIYLLGREDGS*VSQVGE
Trigger: TTCTCCAACCTGAGAAACTCAAGACCCATCCTCCCG...ACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCCAATCCTTATTCTCCACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp CAGGTGGAGAATAAGGATTGGAGGGAGACTTTTCACTCTATATATCTTTTGGGTGGCAGGAGAATTGCTTaGACTCGGGAAGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: QVENKDWRETFHSIYLLGGRRIA*TREAEV
Trigger: AACCTCTGCTTCCCGAGTTCAAGCAATTCTCCTGCC...ACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCCAATCCTTATTCTCCACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp GATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGCTTGCAGGACACCAGGAACATaGCCAGGAGCACTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: DPAIPLLGIYPRDTLYACRTPGT*PGALLC
Trigger: ACACAGGAGTGCTCCTGGGCATGTTCCTGGTGTCCT...GCAAGCATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393469.8
ENST00000469902.6
CDS-3UTR GCA 90 bp ATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTTCCTGGGCAATGCACTaGAGGATGCGGGGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: IHFMLAHLYKIIHCRADCSWAMH*RMRGAP
Trigger: TGGAGCTCCCCGCATCCTGCAGTGCATTGCCCAGGA...ACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR GCA 90 bp CAGGTGGAGAATAAGGATTGGAGGGAGACTTTTCACTCTATATATCTTTTGGGTTTCTCTAAGAGCAGGTaGTCAGAGCAGTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: QVENKDWRETFHSIYLLGFSKSR*SEQWRP
Trigger: AGGCCTCCACTGCTCTGAGCACCTGCTCTTAGAGAA...ACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCCAATCCTTATTCTCCACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp GGAGGGAGACTTTTCACTCTATATATCTTTTGGGTGTGGAAACATGTGAGTGTAAAGAGCTCCTGCACCTaGGACATCTGGGTCATTCTC +
Preference number: 4 (lower is better)
Translates to: GGRLFTLYIFWVWKHVSVKSSCT*DIWVIL
Trigger: GAGAATGACCCAGATGTCCCAGGTGCAGGAGCTCTT...TACACTCACATGTTTCCACACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393469.8
ENST00000469902.6
CDS-3UTR CCA 90 bp GGAGGGAGACTTTTCACTCTATATATCTTTTGGGTGTGGAAACATGTGAGTGTAGACTCCTGTAGCCGCTaGGAAGAAAACCCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: GGRLFTLYIFWVWKHVSVDSCSR*EENPKD
Trigger: GTCTTTGGGGTTTTCTTCCCAGCGGCTACAGGAGTC...TACACTCACATGTTTCCACACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp ATCCTAGAGATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGACCTCTCGAGTGCAGATaGCGCCCAGGAGGAAGACGA +
Preference number: 4 (lower is better)
Translates to: ILEIHFMLAHLYKIIHCRPLECR*RPGGRR
Trigger: TCGTCTTCCTCCTGGGCGCCATCTGCACTCGAGAGG...TCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTATCTCTAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CCA 90 bp AGAGCTGATTGTCATTGCAAAAGATTGGAAAGAATCCAAATGCTCATCATTGTGGGGATCCTGGTGATCTaGACAGGGAGACTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: RADCHCKRLERIQMLIIVGILVI*TGRLLC
Trigger: GCAGAGCAGTCTCCCTGTCCAGATCACCAGGATCCC...CACAATGATGAGCATTTGGATTCTTTCCAATCTTTTGCAATGACAATCAGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469902.6
CDS-3UTR TCA 90 bp GGAGGGAGACTTTTCACTCTATATATCTTTTGGGTGTGGAAACATGTGAGTGTAGTTAGCTGGAGGAGCTaGTCCATGTCCTTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: GGRLFTLYIFWVWKHVSVVSWRS*SMSLVN
Trigger: ATTCACCAAGGACATGGATCAGCTCCTCCAGCTAAC...TACACTCACATGTTTCCACACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp ATCCTAGAGATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGAAGTTGGAGGCTaGTCCAAGGTGAAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: ILEIHFMLAHLYKIIHCRAEVGG*SKVKPW
Trigger: CCAGGGCTTCACCTTGGATCAGCCTCCAACTTCAGC...TCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTATCTCTAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR TCA 90 bp ATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTAAGATGATCTGCTCCTaGGGGGACCGCAAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: IHFMLAHLYKIIHCRADCKMICS*GDRKLL
Trigger: CAGGAGCTTGCGGTCCCCTCAGGAGCAGATCATCTT...ACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR GCA 90 bp GGAGGGAGACTTTTCACTCTATATATCTTTTGGGTGTGGAAACATGTGAGTGTACTGAGGCAGGAGAATTaGTTGAACTCGGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: GGRLFTLYIFWVWKHVSVLRQEN*LNSGSR
Trigger: TCTGCTTCCCGAGTTCAAGCAATTCTCCTGCCTCAG...TACACTCACATGTTTCCACACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp GTGTCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGAGAGCTGATTGTCATTaGAAAAGATTGGAAAGAATC +
Preference number: 4 (lower is better)
Translates to: VSPASLSTCIELFRLGVVRADCH*KRLERI
Trigger: GATTCTTTCCAATCTTTTGCAATGACAATCAGCTCT...CACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CCA 90 bp GATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGCTTGCGGGATCACTTTCTCCTaGGCAATGCACTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: DPAIPLLGIYPRDTLYACGITFS*AMHCRM
Trigger: CATCCTGCAGTGCATTGCCCAGGAGAAAGTGATCCC...GCAAGCATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CCA 90 bp CAGGTGGAGAATAAGGATTGGAGGGAGACTTTTCACTCTATATATCTTTTGGGTCCTCAGAGCCGTAACTaGGAGCTTTCTCTAAGAGCA +
Preference number: 4 (lower is better)
Translates to: QVENKDWRETFHSIYLLGPQSRN*ELSLRA
Trigger: TGCTCTTAGAGAAAGCTCCCAGTTACGGCTCTGAGG...ACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCCAATCCTTATTCTCCACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp CAGGTGGAGAATAAGGATTGGAGGGAGACTTTTCACTCTATATATCTTTTGGGTTGGGTCCACTGTACATaGGACAGCTCCAAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: QVENKDWRETFHSIYLLGWVHCT*DSSKRG
Trigger: TCCTCTTTTGGAGCTGTCCCATGTACAGTGGACCCA...ACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCCAATCCTTATTCTCCACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp TGTAGATTTCCATTGTCCAAAGTGACAGCGGGAGGATGGGTCTTGAGTTTCTCAGTGGAGAATAAGGATTaGAGGGAGACTTTTCACTCT +
Preference number: 4 (lower is better)
Translates to: CRFPLSKVTAGGWVLSFSVENKD*RETFHS
Trigger: AGAGTGAAAAGTCTCCCTCCAATCCTTATTCTCCAC...TGAGAAACTCAAGACCCATCCTCCCGCTGTCACTTTGGACAATGGAAATCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp CCTTTTGATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATCAGAAGCACCGCAACTaGAATTCCTCGCACAGCCCA +
Preference number: 4 (lower is better)
Translates to: PFDPAIPLLGIYPRDTLYQKHRN*NSSHSP
Trigger: TGGGCTGTGCGAGGAATTTCAGTTGCGGTGCTTCTG...ATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATCAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393469.8
ENST00000469902.6
CDS-3UTR TCA 90 bp GGAGGGAGACTTTTCACTCTATATATCTTTTGGGTGTGGAAACATGTGAGTGTACGGGTGAATATCCAATaGAACCATGTTCTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: GGRLFTLYIFWVWKHVSVRVNIQ*NHVLGP
Trigger: TGGACCCAGAACATGGTTTCATTGGATATTCACCCG...TACACTCACATGTTTCCACACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp CAGGTGGAGAATAAGGATTGGAGGGAGACTTTTCACTCTATATATCTTTTGGGTGGAGGAAGACGAAGATaGTGTACAGAAACCACGAGA +
Preference number: 4 (lower is better)
Translates to: QVENKDWRETFHSIYLLGGGRRR*CTETTR
Trigger: TCTCGTGGTTTCTGTACATCATCTTCGTCTTCCTCC...ACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCCAATCCTTATTCTCCACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR TCA 90 bp CAGGTGGAGAATAAGGATTGGAGGGAGACTTTTCACTCTATATATCTTTTGGGTAAGAAGGAGGGGATTTaGGGTCCAAGAGGAAGCTAT +
Preference number: 4 (lower is better)
Translates to: QVENKDWRETFHSIYLLGKKEGI*GPRGSY
Trigger: ATAGCTTCCTCTTGGACCTCAAATCCCCTCCTTCTT...ACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCCAATCCTTATTCTCCACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR TCA 90 bp AGAGCTGATTGTCATTGCAAAAGATTGGAAAGAATCCAAATGCTCATCATTGTGTTCTCCACTGGACTCTaGTTGGTTGCACAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: RADCHCKRLERIQMLIIVFSTGL*LVAQLR
Trigger: CCTGAGCTGTGCAACCAATCAGAGTCCAGTGGAGAA...CACAATGATGAGCATTTGGATTCTTTCCAATCTTTTGCAATGACAATCAGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR TCA 90 bp AGAGCTGATTGTCATTGCAAAAGATTGGAAAGAATCCAAATGCTCATCATTGTGCGGGAGGATGGGTCTTaGGTTTCTCAGGTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: RADCHCKRLERIQMLIIVREDGS*VSQVGE
Trigger: TTCTCCAACCTGAGAAACTCAAGACCCATCCTCCCG...CACAATGATGAGCATTTGGATTCTTTCCAATCTTTTGCAATGACAATCAGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR GCA 90 bp ACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTCATTACAGAAACCACGAGATaGCAACAGCTGCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: TLCLHICTRLFTAELIVITETTR*QQLPGS
Trigger: GCTCCCTGGCAGCTGTTGGCATCTCGTGGTTTCTGT...AATGACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR GCA 90 bp ATCCTAGAGATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAACAGAAACCACGAGATaGCAACAGCTGCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: ILEIHFMLAHLYKIIHCRTETTR*QQLPGS
Trigger: GCTCCCTGGCAGCTGTTGGCATCTCGTGGTTTCTGT...TCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTATCTCTAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR GCA 90 bp AAACATACACTTATTGTGGCCCTCTGCACAAGCAATCTGGTTGTGCAGAGTCTTGTAAGAGTAGTCCACTaGAACGTATGTCAGCATGAA +
Preference number: 4 (lower is better)
Translates to: KHTLIVALCTSNLVVQSLVRVVH*NVCQHE
Trigger: TTCATGCTGACATACGTTGCAGTGGACTACTCTTAC...AAGACTCTGCACAACCAGATTGCTTGTGCAGAGGGCCACAATAAGTGTATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp GGAGGGAGACTTTTCACTCTATATATCTTTTGGGTGTGGAAACATGTGAGTGTACTATCTTGTAGGGTCTaGTTGGTGGCCTTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: GGRLFTLYIFWVWKHVSVLSCRV*LVAFLL
Trigger: AAGCAAGAAGGCCACCAAGCAGACCCTACAAGATAG...TACACTCACATGTTTCCACACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp CAGGTGGAGAATAAGGATTGGAGGGAGACTTTTCACTCTATATATCTTTTGGGTCTATCTTGTAGGGTCTaGTTGGTGGCCTTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: QVENKDWRETFHSIYLLGLSCRV*LVAFLL
Trigger: AAGCAAGAAGGCCACCAAGCAGACCCTACAAGATAG...ACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCCAATCCTTATTCTCCACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp GATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGCTTGCCAAAAACAAAGGCCATaGTCACCAAGCTGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: DPAIPLLGIYPRDTLYACQKQRP*SPSWSG
Trigger: GCCTGACCAGCTTGGTGACCATGGCCTTTGTTTTTG...GCAAGCATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CCA 90 bp ATCCTAGAGATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGATCTCCTTGCCTGGGCTaGCTACTCTCAAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: ILEIHFMLAHLYKIIHCRSPCLG*LLSSFL
Trigger: CAGGAAGCTTGAGAGTAGCCAGCCCAGGCAAGGAGA...TCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTATCTCTAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CCA 90 bp GATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGCTTGCCTTGTAGGGTCTGCTTaGTGGCCTTCTTGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: DPAIPLLGIYPRDTLYACLVGSA*WPSCFS
Trigger: GGAAAAGCAAGAAGGCCACCAAGCAGACCCTACAAG...GCAAGCATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CCA 90 bp AGAGCTGATTGTCATTGCAAAAGATTGGAAAGAATCCAAATGCTCATCATTGTGGAGTCCCTTCGCTCTTaGAAGTCTGCTTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: RADCHCKRLERIQMLIIVESLRS*KSACSS
Trigger: GCTGGAACAAGCAGACTTCCAAGAGCGAAGGGACTC...CACAATGATGAGCATTTGGATTCTTTCCAATCTTTTGCAATGACAATCAGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CCA 90 bp ATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTGGTAGCGATCCCGAGTaGCGAAGTCTGCATTCTCCT +
Preference number: 4 (lower is better)
Translates to: IHFMLAHLYKIIHCRADCGSDPE*RSLHSP
Trigger: AGGAGAATGCAGACTTCGCCACTCGGGATCGCTACC...ACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CCA 90 bp CCTTTTGATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATTTCCTGATGTCACCCTaGGTGAGACGTGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: PFDPAIPLLGIYPRDTLYFLMSP*VRRGPQ
Trigger: CTGAGGACCACGTCTCACCCAGGGTGACATCAGGAA...ATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATCAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR TCA 90 bp ATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTGATCCATGTCCTTGGTaGATTCCAGTAGCGTGCCCT +
Preference number: 4 (lower is better)
Translates to: IHFMLAHLYKIIHCRADCDPCPW*IPVACP
Trigger: AGGGCACGCTACTGGAATTCACCAAGGACATGGATC...ACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR TCA 90 bp CCTTTTGATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGATCCATGTCCTTGGTaGATTCCAGTAGCGTGCCCT +
Preference number: 4 (lower is better)
Translates to: PFDPAIPLLGIYPRDTLYDPCPW*IPVACP
Trigger: AGGGCACGCTACTGGAATTCACCAAGGACATGGATC...ATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATCAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR TCA 90 bp ATCCTAGAGATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGATCCATGTCCTTGGTaGATTCCAGTAGCGTGCCCT +
Preference number: 4 (lower is better)
Translates to: ILEIHFMLAHLYKIIHCRDPCPW*IPVACP
Trigger: AGGGCACGCTACTGGAATTCACCAAGGACATGGATC...TCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTATCTCTAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR TCA 90 bp TTTGATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGCTTTCTCCACTGGACTCTaGTTGGTTGCACAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: FDPAIPLLGIYPRDTLYAFSTGL*LVAQLR
Trigger: CCTGAGCTGTGCAACCAATCAGAGTCCAGTGGAGAA...AGCATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR TCA 90 bp AGAGCTGATTGTCATTGCAAAAGATTGGAAAGAATCCAAATGCTCATCATTGTGTCCACCGGAAAAAGCTaGAGTTGGAGGCTGATCCAA +
Preference number: 4 (lower is better)
Translates to: RADCHCKRLERIQMLIIVSTGKS*SWRLIQ
Trigger: TTGGATCAGCCTCCAACTTCAGCTTTTTCCGGTGGA...CACAATGATGAGCATTTGGATTCTTTCCAATCTTTTGCAATGACAATCAGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR TCA 90 bp TTTGATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGCTCTGCATTCTCCTGGGTaGGCTGAGTCATCTCCATGT +
Preference number: 4 (lower is better)
Translates to: FDPAIPLLGIYPRDTLYALHSPG*AESSPC
Trigger: ACATGGAGATGACTCAGCTCACCCAGGAGAATGCAG...AGCATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR TCA 90 bp ACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTCATTCGGGAGGATGGGTCTTaGGTTTCTCAGGTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: TLCLHICTRLFTAELIVIREDGS*VSQVGE
Trigger: TTCTCCAACCTGAGAAACTCAAGACCCATCCTCCCG...AATGACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR TCA 90 bp ACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTCATTTTCCATTGTCCAAAGTaGCAGCGGGAGGATGGGTCT +
Preference number: 4 (lower is better)
Translates to: TLCLHICTRLFTAELIVIFHCPK*QREDGS
Trigger: AGACCCATCCTCCCGCTGTCACTTTGGACAATGGAA...AATGACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR TCA 90 bp ATCCTAGAGATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGGCAGGAGAATTGCTTaGACTCGGGAAGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: ILEIHFMLAHLYKIIHCRGRRIA*TREAEV
Trigger: AACCTCTGCTTCCCGAGTTCAAGCAATTCTCCTGCC...TCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTATCTCTAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR GCA 90 bp ACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTCATTCAATGCACTGCAGGATaGGGGGAGCTCCATAAAGTC +
Preference number: 4 (lower is better)
Translates to: TLCLHICTRLFTAELIVIQCTAG*GELHKV
Trigger: GACTTTATGGAGCTCCCCGCATCCTGCAGTGCATTG...AATGACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR GCA 90 bp CCTTTTGATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATTTCTCTAAGAGCAGGTaGTCAGAGCAGTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: PFDPAIPLLGIYPRDTLYFSKSR*SEQWRP
Trigger: AGGCCTCCACTGCTCTGAGCACCTGCTCTTAGAGAA...ATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATCAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR GCA 90 bp ACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTCATTTCGCTCTTGGAAGTCTaGTTGTTCCAGCAGGACTCC +
Preference number: 4 (lower is better)
Translates to: TLCLHICTRLFTAELIVISLLEV*LFQQDS
Trigger: GGAGTCCTGCTGGAACAAGCAGACTTCCAAGAGCGA...AATGACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR GCA 90 bp TTTGATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGCTTCGCTCTTGGAAGTCTaGTTGTTCCAGCAGGACTCC +
Preference number: 4 (lower is better)
Translates to: FDPAIPLLGIYPRDTLYASLLEV*LFQQDS
Trigger: GGAGTCCTGCTGGAACAAGCAGACTTCCAAGAGCGA...AGCATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR GCA 90 bp GGAGGGAGACTTTTCACTCTATATATCTTTTGGGTGTGGAAACATGTGAGTGTAAGCTCAGGAACAAGTTaGTCTCCATATGTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: GGRLFTLYIFWVWKHVSVSSGTS*SPYVPS
Trigger: TGAGGGAACATATGGAGAGCAACTTGTTCCTGAGCT...TACACTCACATGTTTCCACACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp ATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTGGGAGACCCAGGGGTTaGACATGTGGGTATAGAAAG +
Preference number: 4 (lower is better)
Translates to: IHFMLAHLYKIIHCRADCGRPRG*TCGYRK
Trigger: CTTTCTATACCCACATGTGCAACCCCTGGGTCTCCC...ACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR GCA 90 bp TTTGATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGCTGGGAGACCCAGGGGTTaGACATGTGGGTATAGAAAG +
Preference number: 4 (lower is better)
Translates to: FDPAIPLLGIYPRDTLYAGRPRG*TCGYRK
Trigger: CTTTCTATACCCACATGTGCAACCCCTGGGTCTCCC...AGCATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CCA 90 bp ATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTTGCACCTGGGACATCTaGGTCATTCTCCAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: IHFMLAHLYKIIHCRADCCTWDI*VILQQA
Trigger: TGCTTGCTGGAGAATGACCCAGATGTCCCAGGTGCA...ACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393469.8
ENST00000469902.6
CDS-3UTR CCA 90 bp CCTTTTGATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGTAATCCCAGTACTTTaGGAGGCTGAGACGGGTGGA +
Preference number: 4 (lower is better)
Translates to: PFDPAIPLLGIYPRDTLYVIPVL*EAETGG
Trigger: TCCACCCGTCTCAGCCTCCCAAAGTACTGGGATTAC...ATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATCAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR TCA 90 bp AGAGCTGATTGTCATTGCAAAAGATTGGAAAGAATCCAAATGCTCATCATTGTGAAGAAGGAGGGGATTTaGGGTCCAAGAGGAAGCTAT +
Preference number: 4 (lower is better)
Translates to: RADCHCKRLERIQMLIIVKKEGI*GPRGSY
Trigger: ATAGCTTCCTCTTGGACCTCAAATCCCCTCCTTCTT...CACAATGATGAGCATTTGGATTCTTTCCAATCTTTTGCAATGACAATCAGCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR GCA 90 bp GGAGGGAGACTTTTCACTCTATATATCTTTTGGGTGTGGAAACATGTGAGTGTAGTAAGAGTAGTCCACTaGAACGTATGTCAGCATGAA +
Preference number: 4 (lower is better)
Translates to: GGRLFTLYIFWVWKHVSVVRVVH*NVCQHE
Trigger: TTCATGCTGACATACGTTGCAGTGGACTACTCTTAC...TACACTCACATGTTTCCACACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR GCA 90 bp ATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTCTGAGGCAGGAGAATTaGTTGAACTCGGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: IHFMLAHLYKIIHCRADCLRQEN*LNSGSR
Trigger: TCTGCTTCCCGAGTTCAAGCAATTCTCCTGCCTCAG...ACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR GCA 90 bp ATCCTAGAGATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGACAAGCAATCTGGTTGTaGAGAGTCTTGGTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: ILEIHFMLAHLYKIIHCRQAIWL*RVLVSP
Trigger: AGGGGACACCAAGACTCTGCACAACCAGATTGCTTG...TCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTATCTCTAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CCA 90 bp ATCCTAGAGATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGACAAAAACAAAGGCCATaGTCACCAAGCTGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: ILEIHFMLAHLYKIIHCRQKQRP*SPSWSG
Trigger: GCCTGACCAGCTTGGTGACCATGGCCTTTGTTTTTG...TCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTATCTCTAGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CCA 90 bp CCTTTTGATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATCTTGTAGGGTCTGCTTaGTGGCCTTCTTGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: PFDPAIPLLGIYPRDTLYLVGSA*WPSCFS
Trigger: GGAAAAGCAAGAAGGCCACCAAGCAGACCCTACAAG...ATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATCAAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CCA 90 bp ATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTTGGGTCCACTGTACATaGGACAGCTCCAAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: IHFMLAHLYKIIHCRADCWVHCT*DSSKRG
Trigger: TCCTCTTTTGGAGCTGTCCCATGTACAGTGGACCCA...ACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CCA 90 bp ATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTCAGGAACTGAGCAGGTaGAGAATAAGGATTGGAGGG +
Preference number: 4 (lower is better)
Translates to: IHFMLAHLYKIIHCRADCQELSR*RIRIGG
Trigger: CCCTCCAATCCTTATTCTCCACCTGCTCAGTTCCTG...ACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR TCA 90 bp ATCCTAGAGATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAATTCAGCAAAGCCGGTaGTATACATGGCACCTGCAA +
Preference number: 4 (lower is better)
Translates to: ILEIHFMLAHLYKIIHCRIQQSR*YTWHLQ
Trigger: TTGCAGGTGCCATGTATATCACCGGCTTTGCTGAAT...TCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTATCTCTAGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393469.8
ENST00000469902.6
CDS-3UTR TCA 90 bp ACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTCATTGGAGGAAGACGAAGATaGTGTACAGAAACCACGAGA +
Preference number: 4 (lower is better)
Translates to: TLCLHICTRLFTAELIVIGGRRR*CTETTR
Trigger: TCTCGTGGTTTCTGTACATCATCTTCGTCTTCCTCC...AATGACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR GCA 90 bp TTTGATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGCTCTTATTGTGGCCCTCTaGACAAGCAATCTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: FDPAIPLLGIYPRDTLYALIVAL*TSNLVV
Trigger: CACAACCAGATTGCTTGTGCAGAGGGCCACAATAAG...AGCATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR GCA 90 bp ATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTCTTATTGTGGCCCTCTaGACAAGCAATCTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: IHFMLAHLYKIIHCRADCLIVAL*TSNLVV
Trigger: CACAACCAGATTGCTTGTGCAGAGGGCCACAATAAG...ACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CCA 90 bp ATCCTAGAGATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGATCTGCACAAGCAATCTaGTTGTGCAGAGTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: ILEIHFMLAHLYKIIHCRSAQAI*LCRVLV
Trigger: CACCAAGACTCTGCACAACCAGATTGCTTGTGCAGA...TCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTATCTCTAGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR TCA 90 bp ACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTCATTTTGCTTTTCCTCTTCTaGCTTTCTGGGGTCCTGTTA +
Preference number: 4 (lower is better)
Translates to: TLCLHICTRLFTAELIVILLFLF*LSGVLL
Trigger: TAACAGGACCCCAGAAAGTCAGAAGAGGAAAAGCAA...AATGACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR TCA 90 bp GGAGGGAGACTTTTCACTCTATATATCTTTTGGGTGTGGAAACATGTGAGTGTAAATGCATGTACCTTTTaGTCCTGCAATTCCACTTTT +
Preference number: 4 (lower is better)
Translates to: GGRLFTLYIFWVWKHVSVNACTF*SCNSTF
Trigger: AAAAGTGGAATTGCAGGATCAAAAGGTACATGCATT...TACACTCACATGTTTCCACACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR GCA 90 bp TTTGATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGCTAGCTCAGGAACAAGTTaGTCTCCATATGTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: FDPAIPLLGIYPRDTLYASSGTS*SPYVPS
Trigger: TGAGGGAACATATGGAGAGCAACTTGTTCCTGAGCT...AGCATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CCA 90 bp ATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTAATGAAACCATGTTCTaGGTCCAGGTGGGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: IHFMLAHLYKIIHCRADCNETMF*VQVGER
Trigger: TCTTTCACCCACCTGGACCCAGAACATGGTTTCATT...ACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393469.8
ENST00000469902.6
CDS-3UTR CCA 90 bp ATCCTAGAGATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAAGAAATCTTCTCCACTaGACTCTGATTGGTTGCACA +
Preference number: 4 (lower is better)
Translates to: ILEIHFMLAHLYKIIHCRRNLLH*TLIGCT
Trigger: TGTGCAACCAATCAGAGTCCAGTGGAGAAGATTTCT...TCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTATCTCTAGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CCA 90 bp TTTGATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGCTAGAAATCTTCTCCACTaGACTCTGATTGGTTGCACA +
Preference number: 4 (lower is better)
Translates to: FDPAIPLLGIYPRDTLYARNLLH*TLIGCT
Trigger: TGTGCAACCAATCAGAGTCCAGTGGAGAAGATTTCT...AGCATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CCA 90 bp AGAGCTGATTGTCATTGCAAAAGATTGGAAAGAATCCAAATGCTCATCATTGTGGGGTATAGAAAGAAGTaGATCTTCTCCAGACATCTT +
Preference number: 4 (lower is better)
Translates to: RADCHCKRLERIQMLIIVGYRKK*IFSRHL
Trigger: AAGATGTCTGGAGAAGATCCACTTCTTTCTATACCC...CACAATGATGAGCATTTGGATTCTTTCCAATCTTTTGCAATGACAATCAGCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CCA 90 bp GGAGGGAGACTTTTCACTCTATATATCTTTTGGGTGTGGAAACATGTGAGTGTAACTCTATATATCTTTTaGGTGTGGAAACATGTGAGT +
Preference number: 4 (lower is better)
Translates to: GGRLFTLYIFWVWKHVSVTLYIF*VWKHVS
Trigger: ACTCACATGTTTCCACACCCAAAAGATATATAGAGT...TACACTCACATGTTTCCACACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CCA 90 bp TTTGATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGCTGTGGAGAATAAGGATTaGAGGGAGACTTTTCACTCT +
Preference number: 4 (lower is better)
Translates to: FDPAIPLLGIYPRDTLYAVENKD*RETFHS
Trigger: AGAGTGAAAAGTCTCCCTCCAATCCTTATTCTCCAC...AGCATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CCA 90 bp CCTTTTGATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGTGGAGAATAAGGATTaGAGGGAGACTTTTCACTCT +
Preference number: 4 (lower is better)
Translates to: PFDPAIPLLGIYPRDTLYVENKD*RETFHS
Trigger: AGAGTGAAAAGTCTCCCTCCAATCCTTATTCTCCAC...ATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATCAAAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
3UTR CAA 72 bp ATTATTCACTGCAGAGCTGATTGTCATTGCAAAAGATaGGAAAGAATCCAAATGCTCATCATTGTGGAACTG +
Preference number: 4 (lower is better)
Translates to: IIHCRADCHCKR*ERIQMLIIVEL
Trigger: CAGTTCCACAATGATGAGCATTTGGATTCTTTCCAATCTTTTGCAATGACAATCAGCTCTGCAGTGAATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
3UTR CAA 72 bp CAAATGCATGTACCTTTTGATCCTGCAATTCCACTTTaGGGAATTTATCCTAGAGATACACTTTATGCTTGC +
Preference number: 4 (lower is better)
Translates to: QMHVPFDPAIPL*GIYPRDTLYAC
Trigger: GCAAGCATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATCAAAAGGTACATGCATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR TCA 90 bp AGAGCTGATTGTCATTGCAAAAGATTGGAAAGAATCCAAATGCTCATCATTGTGTATTCACTGCAGAGCTaGTTGTCATTGCAAAAGATT +
Preference number: 4 (lower is better)
Translates to: RADCHCKRLERIQMLIIVYSLQS*LSLQKI
Trigger: AATCTTTTGCAATGACAATCAGCTCTGCAGTGAATA...CACAATGATGAGCATTTGGATTCTTTCCAATCTTTTGCAATGACAATCAGCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CCA 90 bp TTTGATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGCTGGGTATAGAAAGAAGTaGATCTTCTCCAGACATCTT +
Preference number: 4 (lower is better)
Translates to: FDPAIPLLGIYPRDTLYAGYRKK*IFSRHL
Trigger: AAGATGTCTGGAGAAGATCCACTTCTTTCTATACCC...AGCATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR TCA 90 bp ACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTCATTTATTCACTGCAGAGCTaGTTGTCATTGCAAAAGATT +
Preference number: 4 (lower is better)
Translates to: TLCLHICTRLFTAELIVIYSLQS*LSLQKI
Trigger: AATCTTTTGCAATGACAATCAGCTCTGCAGTGAATA...AATGACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR GCA 90 bp ATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTTACAAGATTATTCACTaGAGAGCTGATTGTCATTGC +
Preference number: 4 (lower is better)
Translates to: IHFMLAHLYKIIHCRADCYKIIH*RADCHC
Trigger: GCAATGACAATCAGCTCTGCAGTGAATAATCTTGTA...ACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CCA 90 bp TTTGATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGCTACTCTATATATCTTTTaGGTGTGGAAACATGTGAGT +
Preference number: 4 (lower is better)
Translates to: FDPAIPLLGIYPRDTLYATLYIF*VWKHVS
Trigger: ACTCACATGTTTCCACACCCAAAAGATATATAGAGT...AGCATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATCAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS CCA 90 bp CAAGCAGGGATCCTGGTGATCTGGACAGGGAGACTGCTCTGCTCCTaGGACAGCCAGCTCCCAGCGCCCGGCCCGCCCGGTCCCCGCCCC +
Preference number: 5 (lower is better)
Translates to: QAGILVIWTGRLLCS*DSQLPAPGPPGPRP
Trigger: GGGGCGGGGACCGGGCGGGCCGGGCGCTGGGAGCTGGCTGTCCCAGGAGCAGAGCAGTCTCCCTGTCCAGATCACCAGGATCCCTGCTTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481760.2
CDS GCA 90 bp CTCCAGCAAGCAGGGATCCTGGTGATCTGGACAGGGAGACTGCTCTaGTCCTGGGACAGCCAGCTCCCAGCGCCCGGCCCGCCCGGTCCC +
Preference number: 5 (lower is better)
Translates to: LQQAGILVIWTGRLL*SWDSQLPAPGPPGP
Trigger: GGGACCGGGCGGGCCGGGCGCTGGGAGCTGGCTGTCCCAGGAGCAGAGCAGTCTCCCTGTCCAGATCACCAGGATCCCTGCTTGCTGGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469902.6
ENST00000481760.2
CDS CCA 90 bp GCCCGATGGTGCCTCCCGTCTGCCCACCCAGGACCGAGGAGATCATaGAGTAGACGCCACCGCTGCCGATGCTGCTGCGCTCCCCGACGC +
Preference number: 5 (lower is better)
Translates to: ARWCLPSAHPGPRRS*SRRHRCRCCCAPRR
Trigger: GCGTCGGGGAGCGCAGCAGCATCGGCAGCGGTGGCGTCTACTCCATGATCTCCTCGGTCCTGGGTGGGCAGACGGGAGGCACCATCGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393469.8
ENST00000462437.1
ENST00000469902.6
ENST00000473262.5
ENST00000479826.1
CDS GCA 90 bp TCTGCCCACCCAGGACCGAGGAGATCATGGAGTAGACGCCACCGCTaGCGATGCTGCTGCGCTCCCCGACGCCAATGCCAGACAGCACCG +
Preference number: 5 (lower is better)
Translates to: SAHPGPRRSWSRRHR*RCCCAPRRQCQTAP
Trigger: CGGTGCTGTCTGGCATTGGCGTCGGGGAGCGCAGCAGCATCGGCAGCGGTGGCGTCTACTCCATGATCTCCTCGGTCCTGGGTGGGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393469.8
ENST00000462437.1
ENST00000469902.6
ENST00000473262.5
ENST00000479826.1
CDS CCA 90 bp ACACCATCCCAGGTCCCAAACAGCACAGGCTCCCACATGAACAGCTaGGTCTTCCACCAGGGCTGGGGCTGGGCCAGGGCATCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: TPSQVPNSTGSHMNS*VFHQGWGWARASCW
Trigger: CCAGCAGGATGCCCTGGCCCAGCCCCAGCCCTGGTGGAAGACCCAGCTGTTCATGTGGGAGCCTGTGCTGTTTGGGACCTGGGATGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000462437.1
ENST00000469902.6
CDS CCA 90 bp ATGTTGAAGCCGGCCATGACTCCTGAAAGACACCCAGATGGGGAATaGGGTGAGCAGCCTCCTCCACGCATCGCCTTCCCCAGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: MLKPAMTPERHPDGE*GEQPPPRIAFPRAA
Trigger: GGCAGCCCTGGGGAAGGCGATGCGTGGAGGAGGCTGCTCACCCCATTCCCCATCTGGGTGTCTTTCAGGAGTCATGGCCGGCTTCAACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430155.6
CDS CCA 90 bp TCACCAGAGCAGGAGCAAGAGGTCCTGGGAGGTGCTGCACACTGCTaGGCTGCCTCATGGAAGAGCTCCTGCACCTGGGACATCTGGGTC +
Preference number: 5 (lower is better)
Translates to: SPEQEQEVLGGAAHC*AASWKSSCTWDIWV
Trigger: GACCCAGATGTCCCAGGTGCAGGAGCTCTTCCATGAGGCAGCCCAGCAGTGTGCAGCACCTCCCAGGACCTCTTGCTCCTGCTCTGGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481760.2
CDS GCA 90 bp ATGTCACCAGAGCAGGAGCAAGAGGTCCTGGGAGGTGCTGCACACTaGTGGGCTGCCTCATGGAAGAGCTCCTGCACCTGGGACATCTGG +
Preference number: 5 (lower is better)
Translates to: MSPEQEQEVLGGAAH*WAASWKSSCTWDIW
Trigger: CCAGATGTCCCAGGTGCAGGAGCTCTTCCATGAGGCAGCCCAGCAGTGTGCAGCACCTCCCAGGACCTCTTGCTCCTGCTCTGGTGACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481760.2
CDS CCA 90 bp GCCAGGGCATCCTGCTGGGCTGCCTCATGGAAGAGCTCCTGCACCTaGGACATCTGGGTCATTCTCCAGCAAGCAGGGATCCTGGTGATC +
Preference number: 5 (lower is better)
Translates to: ARASCWAASWKSSCT*DIWVILQQAGILVI
Trigger: GATCACCAGGATCCCTGCTTGCTGGAGAATGACCCAGATGTCCCAGGTGCAGGAGCTCTTCCATGAGGCAGCCCAGCAGGATGCCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393469.8
ENST00000469902.6
CDS-3UTR CAA 90 bp CTAGTAGTGAGGCATCAGCTGCTCCCGGTTCACGAGGGAGGAGTGGTGGTAGCGGTTTGGCCCCTTCCCTaGTCCCAGACAGGCAAGTGC +
Preference number: 5 (lower is better)
Translates to: LVVRHQLLPVHEGGVVVAVWPLP*SQTGKC
Trigger: GCACTTGCCTGTCTGGGACAAGGGAAGGGGCCAAAC...CGCTACCACCACTCCTCCCTCGTGAACCGGGAGCAGCTGATGCCTCACTACTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS GCA 90 bp AGGAAGCTTCTGATGAGCCGAATCTGGGGGCCGAGTGTGGTGGAGTaGACGCAGGAGCAACATCTGAGTCTCCCGGAGGTGCCCAGTTGT +
Preference number: 5 (lower is better)
Translates to: RKLLMSRIWGPSVVE*TQEQHLSLPEVPSC
Trigger: ACAACTGGGCACCTCCGGGAGACTCAGATGTTGCTCCTGCGTGCACTCCACCACACTCGGCCCCCAGATTCGGCTCATCAGAAGCTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461616.1
CDS GCA 90 bp AGAGCAGGAGCAAGAGGTCCTGGGAGGTGCTGCACACTGCTGGGCTaGCTCATGGAAGAGCTCCTGCACCTGGGACATCTGGGTCATTCT +
Preference number: 5 (lower is better)
Translates to: RAGARGPGRCCTLLG*LMEELLHLGHLGHS
Trigger: AGAATGACCCAGATGTCCCAGGTGCAGGAGCTCTTCCATGAGGCAGCCCAGCAGTGTGCAGCACCTCCCAGGACCTCTTGCTCCTGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481760.2
CDS GCA 90 bp GCATCTTATGTCACCAGAGCAGGAGCAAGAGGTCCTGGGAGGTGCTaGACACTGCTGGGCTGCCTCATGGAAGAGCTCCTGCACCTGGGA +
Preference number: 5 (lower is better)
Translates to: ASYVTRAGARGPGRC*TLLGCLMEELLHLG
Trigger: TCCCAGGTGCAGGAGCTCTTCCATGAGGCAGCCCAGCAGTGTGCAGCACCTCCCAGGACCTCTTGCTCCTGCTCTGGTGACATAAGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481760.2
CDS CCA 90 bp TCCTGCTGGGCTGCCTCATGGAAGAGCTCCTGCACCTGGGACATCTaGGTCATTCTCCAGCAAGCAGGGATCCTGGTGATCTGGACAGGG +
Preference number: 5 (lower is better)
Translates to: SCWAASWKSSCTWDI*VILQQAGILVIWTG
Trigger: CCCTGTCCAGATCACCAGGATCCCTGCTTGCTGGAGAATGACCCAGATGTCCCAGGTGCAGGAGCTCTTCCATGAGGCAGCCCAGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393469.8
ENST00000469902.6
CDS CCA 90 bp CATGCCACAATCCAGGCCCAAGCCCAGCCAGGAATGGGACACCCTTaGCACCTCCCAGGACTCTGGACACTCATCCATTCTGGTACTGGC +
Preference number: 5 (lower is better)
Translates to: HATIQAQAQPGMGHP*HLPGLWTLIHSGTG
Trigger: GCCAGTACCAGAATGGATGAGTGTCCAGAGTCCTGGGAGGTGCCAAGGGTGTCCCATTCCTGGCTGGGCTTGGGCCTGGATTGTGGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461616.1
CDS CCA 90 bp CACTGCTGGGCTGCCTCATGGAAGAGCTCCTGCACCTGGGACATCTaGGTCATTCTCCAGCAAGCAGGGATCCTGGTGATCTGGACAGGG +
Preference number: 5 (lower is better)
Translates to: HCWAASWKSSCTWDI*VILQQAGILVIWTG
Trigger: CCCTGTCCAGATCACCAGGATCCCTGCTTGCTGGAGAATGACCCAGATGTCCCAGGTGCAGGAGCTCTTCCATGAGGCAGCCCAGCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481760.2
CDS CCA 90 bp GGTGCTGCACACTGCTGGGCTGCCTCATGGAAGAGCTCCTGCACCTaGGACATCTGGGTCATTCTCCAGCAAGCAGGGATCCTGGTGATC +
Preference number: 5 (lower is better)
Translates to: GAAHCWAASWKSSCT*DIWVILQQAGILVI
Trigger: GATCACCAGGATCCCTGCTTGCTGGAGAATGACCCAGATGTCCCAGGTGCAGGAGCTCTTCCATGAGGCAGCCCAGCAGTGTGCAGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481760.2
CDS-3UTR CAA 90 bp GAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCGCCCTCCAAGACTCTTaGGGCAGGTCCCTCAGAGCC +
Preference number: 5 (lower is better)
Translates to: EASTIPDVTLGETWSSESALQDS*GRSLRA
Trigger: GGCTCTGAGGGACCTGCCCAAAGAGTCTTGGAGGGC...GGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp GGTGTCGTGTTGCAGAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGCCCTCCAAGACTCTTaGGGCAGGTCCCTCAGAGCC +
Preference number: 5 (lower is better)
Translates to: GVVLQRLAPFLMSPWVRRALQDS*GRSLRA
Trigger: GGCTCTGAGGGACCTGCCCAAAGAGTCTTGGAGGGC...ACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTGCAACACGACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS TCA 90 bp GAATCTGGGGGCCGAGTGTGGTGGAGTGCACGCAGGAGCAACATCTaGGTCTCCCGGAGGTGCCCAGTTGTTAGGTTCCCATGCCACAAT +
Preference number: 5 (lower is better)
Translates to: ESGGRVWWSARRSNI*VSRRCPVVRFPCHN
Trigger: ATTGTGGCATGGGAACCTAACAACTGGGCACCTCCGGGAGACTCAGATGTTGCTCCTGCGTGCACTCCACCACACTCGGCCCCCAGATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461616.1
CDS GCA 90 bp TGGCACCTGCAACACACTGTCCAAACACATAGAGCAGCCCGATGGTaGCTCCCGTCTGCCCACCCAGGACCGAGGAGATCATGGAGTAGA +
Preference number: 5 (lower is better)
Translates to: WHLQHTVQTHRAARW*LPSAHPGPRRSWSR
Trigger: TCTACTCCATGATCTCCTCGGTCCTGGGTGGGCAGACGGGAGGCACCATCGGGCTGCTCTATGTGTTTGGACAGTGTGTTGCAGGTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000462437.1
ENST00000469902.6
CDS CCA 90 bp ACATGGCACCTGCAACACACTGTCCAAACACATAGAGCAGCCCGATaGTGCCTCCCGTCTGCCCACCCAGGACCGAGGAGATCATGGAGT +
Preference number: 5 (lower is better)
Translates to: TWHLQHTVQTHRAAR*CLPSAHPGPRRSWS
Trigger: ACTCCATGATCTCCTCGGTCCTGGGTGGGCAGACGGGAGGCACCATCGGGCTGCTCTATGTGTTTGGACAGTGTGTTGCAGGTGCCATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000462437.1
ENST00000469902.6
CDS CCA 90 bp CCGGTGATATACATGGCACCTGTCCAAACACATAGAGCAGCCCGATaGTGCCTCCCGTCTGCCCACCCAGGACCGAGGAGATCATGGAGT +
Preference number: 5 (lower is better)
Translates to: PVIYMAPVQTHRAAR*CLPSAHPGPRRSWS
Trigger: ACTCCATGATCTCCTCGGTCCTGGGTGGGCAGACGGGAGGCACCATCGGGCTGCTCTATGTGTTTGGACAGGTGCCATGTATATCACCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR CAA 90 bp AGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTACATGGGACAGCTCCAAAAGGCCCTCCAAGACTCTTaGGGCAGGTCCCTCAGAGCC +
Preference number: 5 (lower is better)
Translates to: SSTKVLSLGPLYMGQLQKALQDS*GRSLRA
Trigger: GGCTCTGAGGGACCTGCCCAAAGAGTCTTGGAGGGC...CTTTTGGAGCTGTCCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp AGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTACATGGGCCTGTTACCCTCTCCTaGCCTGGGCTGGCTACTCTC +
Preference number: 5 (lower is better)
Translates to: RLEKQLHEGPELGSTVHGPVTLS*PGLATL
Trigger: GAGAGTAGCCAGCCCAGGCAAGGAGAGGGTAACAGG...CCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp GCTTTCTCTAAGAGCAGGTGCTCAGAGCAGTGGAGGCCTTCTGCGCCCTCCCTGCTCTTGGAAGTCTGCTaGTTCCAGCAGGACTCCTGC +
Preference number: 5 (lower is better)
Translates to: AFSKSRCSEQWRPSAPSLLLEVC*FQQDSC
Trigger: GCAGGAGTCCTGCTGGAACAAGCAGACTTCCAAGAG...CAGGGAGGGCGCAGAAGGCCTCCACTGCTCTGAGCACCTGCTCTTAGAGAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS CCA 90 bp GGGACACCCTTGGCACCTCCCAGGACTCTGGACACTCATCCATTCTaGTACTGGCTCCAAATTGGCACAGACCAAGGTGAAGCCCTGGAC +
Preference number: 5 (lower is better)
Translates to: GTPLAPPRTLDTHPF*YWLQIGTDQGEALD
Trigger: GTCCAGGGCTTCACCTTGGTCTGTGCCAATTTGGAGCCAGTACCAGAATGGATGAGTGTCCAGAGTCCTGGGAGGTGCCAAGGGTGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461616.1
CDS CCA 90 bp CAAGCCCAGCCAGGAATGGGACACCCTTGGCACCTCCCAGGACTCTaGACACTCATCCATTCTGGTACTGGCTCCAAATTGGCACAGACC +
Preference number: 5 (lower is better)
Translates to: QAQPGMGHPWHLPGL*TLIHSGTGSKLAQT
Trigger: GGTCTGTGCCAATTTGGAGCCAGTACCAGAATGGATGAGTGTCCAGAGTCCTGGGAGGTGCCAAGGGTGTCCCATTCCTGGCTGGGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461616.1
CDS-3UTR CAA 90 bp CAGAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATGTTTGGCCCCTTCCCTaGTCCCAGACAGGCAAGTGC +
Preference number: 5 (lower is better)
Translates to: QRLAPFLMSPWVRRGPQNVWPLP*SQTGKC
Trigger: GCACTTGCCTGTCTGGGACAAGGGAAGGGGCCAAAC...ATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp GGTGTCGTGTTGCAGAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTCCACGGGTGTTTTGTTaGGCCCCTTCCCTTGTCCCA +
Preference number: 5 (lower is better)
Translates to: GVVLQRLAPFLMSPWVRRPRVFC*APSLVP
Trigger: TGGGACAAGGGAAGGGGCCAAACAAAACACCCGTGG...ACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTGCAACACGACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp GAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCCCACGGGTGTTTTGTTaGGCCCCTTCCCTTGTCCCA +
Preference number: 5 (lower is better)
Translates to: EASTIPDVTLGETWSSESPRVFC*APSLVP
Trigger: TGGGACAAGGGAAGGGGCCAAACAAAACACCCGTGG...GGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp CTCCCAGGAGGCAGCGGGCAACCTGTCAGAGATCTCGACAGGGAAAGAAGGAGGGCACAAGCAATCTGGTaGTGCAGAGTCTTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: LPGGSGQPVRDLDRERRRAQAIW*CRVLVS
Trigger: GGACACCAAGACTCTGCACAACCAGATTGCTTGTGC...CCTCCTTCTTTCCCTGTCGAGATCTCTGACAGGTTGCCCGCTGCCTCCTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS TCA 90 bp GACACCTGCGAGGTTAATGCCCAGCAAGGCCAGAAGCACCGCAACTaGAATTCCTCGCACAGCCCAGATATTCCCGAGGCCCAGCAAATC +
Preference number: 5 (lower is better)
Translates to: DTCEVNAQQGQKHRN*NSSHSPDIPEAQQI
Trigger: GATTTGCTGGGCCTCGGGAATATCTGGGCTGTGCGAGGAATTTCAGTTGCGGTGCTTCTGGCCTTGCTGGGCATTAACCTCGCAGGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS GCA 90 bp GTGATATACATGGCACCTGTCCAAACACATAGAGCAGCCCGATGGTaGCTCCCGTCTGCCCACCCAGGACCGAGGAGATCATGGAGTAGA +
Preference number: 5 (lower is better)
Translates to: VIYMAPVQTHRAARW*LPSAHPGPRRSWSR
Trigger: TCTACTCCATGATCTCCTCGGTCCTGGGTGGGCAGACGGGAGGCACCATCGGGCTGCTCTATGTGTTTGGACAGGTGCCATGTATATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR CAA 90 bp CAGAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATGCAGCCACGGGTGTTTaGTTTGGCCCCTTCCCTTGT +
Preference number: 5 (lower is better)
Translates to: QRLAPFLMSPWVRRGPQNAATGV*FGPFPC
Trigger: ACAAGGGAAGGGGCCAAACAAAACACCCGTGGCTGC...ATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp TGGAGGCTGATCCAAGGTGAAGCCCTGGACTGGCCCGGCCAATGTAGAAATACAGCAGCCACGGGTGTTTaGTTTGGCCCCTTCCCTTGT +
Preference number: 5 (lower is better)
Translates to: WRLIQGEALDWPGQCRNTAATGV*FGPFPC
Trigger: ACAAGGGAAGGGGCCAAACAAAACACCCGTGGCTGC...TGTATTTCTACATTGGCCGGGCCAGTCCAGGGCTTCACCTTGGATCAGCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR CAA 90 bp CACTGTATCACAAACATGATGAGAAGGGACCCAACAGCCCCCAACAGGGAGACCCCTGTTACCCTCTCCTaGCCTGGGCTGGCTACTCTC +
Preference number: 5 (lower is better)
Translates to: HCITNMMRRDPTAPNRETPVTLS*PGLATL
Trigger: GAGAGTAGCCAGCCCAGGCAAGGAGAGGGTAACAGG...GGTCTCCCTGTTGGGGGCTGTTGGGTCCCTTCTCATCATGTTTGTGATACAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR CAA 90 bp GAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCCTCTTGGAAGTCTGCTaGTTCCAGCAGGACTCCTGC +
Preference number: 5 (lower is better)
Translates to: EASTIPDVTLGETWSSESLLEVC*FQQDSC
Trigger: GCAGGAGTCCTGCTGGAACAAGCAGACTTCCAAGAG...GGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp AGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTACATGGGCTCTTGGAAGTCTGCTaGTTCCAGCAGGACTCCTGC +
Preference number: 5 (lower is better)
Translates to: RLEKQLHEGPELGSTVHGLLEVC*FQQDSC
Trigger: GCAGGAGTCCTGCTGGAACAAGCAGACTTCCAAGAG...CCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp GAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCACGAAGGTCCTGAGCTaGGGTCCACTGTACATGGGA +
Preference number: 5 (lower is better)
Translates to: EASTIPDVTLGETWSSESTKVLS*GPLYMG
Trigger: TCCCATGTACAGTGGACCCAAGCTCAGGACCTTCGT...GGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS GCA 90 bp CCAATGAAACCATGTTCTGTCCAAACACATAGAGCAGCCCGATGGTaGCTCCCGTCTGCCCACCCAGGACCGAGGAGATCATGGAGTAGA +
Preference number: 5 (lower is better)
Translates to: PMKPCSVQTHRAARW*LPSAHPGPRRSWSR
Trigger: TCTACTCCATGATCTCCTCGGTCCTGGGTGGGCAGACGGGAGGCACCATCGGGCTGCTCTATGTGTTTGGACAGAACATGGTTTCATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479826.1
CDS CCA 90 bp ACAAAGTCCAGTGTGGACACGGCCAGCAGGAACAGCAACAGCAGCTaGAGGCGGATTATCCATTTGACACCTGCGAGGTTAATGCCCAGC +
Preference number: 5 (lower is better)
Translates to: TKSSVDTASRNSNSS*RRIIHLTPARLMPS
Trigger: GCTGGGCATTAACCTCGCAGGTGTCAAATGGATAATCCGCCTCCAGCTGCTGTTGCTGTTCCTGCTGGCCGTGTCCACACTGGACTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp AGAGCTCTTCAGACTGGGTGTCGTGTTGCAGAGGCTAGCACCATTCCTGATGTCCCACGGGTGTTTTGTTaGGCCCCTTCCCTTGTCCCA +
Preference number: 5 (lower is better)
Translates to: RALQTGCRVAEASTIPDVPRVFC*APSLVP
Trigger: TGGGACAAGGGAAGGGGCCAAACAAAACACCCGTGG...GACATCAGGAATGGTGCTAGCCTCTGCAACACGACACCCAGTCTGAAGAGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp GAAGGTCCTGAGCTTGGGTCCACTGTACATGGGACAGCTCCAAAAGAGGAAGGTGCAGCCACGGGTGTTTaGTTTGGCCCCTTCCCTTGT +
Preference number: 5 (lower is better)
Translates to: EGPELGSTVHGTAPKEEGAATGV*FGPFPC
Trigger: ACAAGGGAAGGGGCCAAACAAAACACCCGTGGCTGC...ACCTTCCTCTTTTGGAGCTGTCCCATGTACAGTGGACCCAAGCTCAGGACCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp TCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGTTGGCCCTCCAAGACTCTTaGGGCAGGTCCCTCAGAGCC +
Preference number: 5 (lower is better)
Translates to: SPASLSTCIELFRLGVVLALQDS*GRSLRA
Trigger: GGCTCTGAGGGACCTGCCCAAAGAGTCTTGGAGGGC...CAACACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp AGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTACATGGGACAGCTCCAAAAGACGAAGGTCCTGAGCTaGGGTCCACTGTACATGGGA +
Preference number: 5 (lower is better)
Translates to: SSTKVLSLGPLYMGQLQKTKVLS*GPLYMG
Trigger: TCCCATGTACAGTGGACCCAAGCTCAGGACCTTCGT...CTTTTGGAGCTGTCCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp GGTGAGCTGAGTCATCTCCATGTCAACCTTAGCCAGGGACGGCGCCAAGATGATGCTGAGGCAGGAGAATaGCTTGAACTCGGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: GELSHLHVNLSQGRRQDDAEAGE*LELGKQ
Trigger: CTGCTTCCCGAGTTCAAGCAATTCTCCTGCCTCAGC...ATCATCTTGGCGCCGTCCCTGGCTAAGGTTGACATGGAGATGACTCAGCTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR CAA 90 bp CAGAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATAGACTGGGTGTCGTGTaGCAGAGGCTAGCACCATTC +
Preference number: 5 (lower is better)
Translates to: QRLAPFLMSPWVRRGPQNRLGVV*QRLAPF
Trigger: GAATGGTGCTAGCCTCTGCAACACGACACCCAGTCT...ATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp AGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTACATGGGTGGTTGTGCAGAGTCTaGGTGTCCCCTGCTAGTCTT +
Preference number: 5 (lower is better)
Translates to: RLEKQLHEGPELGSTVHGWLCRV*VSPASL
Trigger: AAGACTAGCAGGGGACACCAAGACTCTGCACAACCA...CCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp GGTGTCGTGTTGCAGAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGCACAAGCAATCTGGTaGTGCAGAGTCTTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: GVVLQRLAPFLMSPWVRRAQAIW*CRVLVS
Trigger: GGACACCAAGACTCTGCACAACCAGATTGCTTGTGC...ACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTGCAACACGACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS TCA 90 bp GAAGGGCCTCTCGAGTGCAGATGGCGCCCAGGAGGAAGACGAAGATaGTGTACAGAAACCACCTGCAAAACCCAAGAGCAGAACAGAGCT +
Preference number: 5 (lower is better)
Translates to: EGPLECRWRPGGRRR*CTETTCKTQEQNRA
Trigger: AGCTCTGTTCTGCTCTTGGGTTTTGCAGGTGGTTTCTGTACATCATCTTCGTCTTCCTCCTGGGCGCCATCTGCACTCGAGAGGCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485954.5
CDS CCA 90 bp TATCCAATGAAACCATGTTCTGTCCAAACACATAGAGCAGCCCGATaGTGCCTCCCGTCTGCCCACCCAGGACCGAGGAGATCATGGAGT +
Preference number: 5 (lower is better)
Translates to: YPMKPCSVQTHRAAR*CLPSAHPGPRRSWS
Trigger: ACTCCATGATCTCCTCGGTCCTGGGTGGGCAGACGGGAGGCACCATCGGGCTGCTCTATGTGTTTGGACAGAACATGGTTTCATTGGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479826.1
CDS-3UTR CAA 90 bp CAGAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATTATGTCAGCATGAAGTaGATGGTGACGATGGGGGCC +
Preference number: 5 (lower is better)
Translates to: QRLAPFLMSPWVRRGPQNYVSMK*MVTMGA
Trigger: GGCCCCCATCGTCACCATCAACTTCATGCTGACATA...ATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp CAAGCAATCTGGTTGTGCAGAGTCTTGGTGTCCCCTGCTAGTCTTAGTACCTGTCCTGTTACCCTCTCCTaGCCTGGGCTGGCTACTCTC +
Preference number: 5 (lower is better)
Translates to: QAIWLCRVLVSPASLSTCPVTLS*PGLATL
Trigger: GAGAGTAGCCAGCCCAGGCAAGGAGAGGGTAACAGG...ACAGGTACTAAGACTAGCAGGGGACACCAAGACTCTGCACAACCAGATTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp TTTCTCAGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTACTCTTGGAAGTCTGCTaGTTCCAGCAGGACTCCTGC +
Preference number: 5 (lower is better)
Translates to: FLRLEKQLHEGPELGSTVLLEVC*FQQDSC
Trigger: GCAGGAGTCCTGCTGGAACAAGCAGACTTCCAAGAG...TACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCTGAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp GGTGTCGTGTTGCAGAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTCTGGACTCTGATTGGTaGCACAGCTCAGGAACAAGT +
Preference number: 5 (lower is better)
Translates to: GVVLQRLAPFLMSPWVRRLDSDW*HSSGTS
Trigger: ACTTGTTCCTGAGCTGTGCAACCAATCAGAGTCCAG...ACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTGCAACACGACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp AGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTACATGGGCTGGACTCTGATTGGTaGCACAGCTCAGGAACAAGT +
Preference number: 5 (lower is better)
Translates to: RLEKQLHEGPELGSTVHGLDSDW*HSSGTS
Trigger: ACTTGTTCCTGAGCTGTGCAACCAATCAGAGTCCAG...CCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp CAGAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATAGGCAGGAGAATTGCTaGAACTCGGGAAGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: QRLAPFLMSPWVRRGPQNRQENC*NSGSRG
Trigger: ACCTCTGCTTCCCGAGTTCAAGCAATTCTCCTGCCT...ATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp TGGAGGCTGATCCAAGGTGAAGCCCTGGACTGGCCCGGCCAATGTAGAAATACAAGGCAGGAGAATTGCTaGAACTCGGGAAGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: WRLIQGEALDWPGQCRNTRQENC*NSGSRG
Trigger: ACCTCTGCTTCCCGAGTTCAAGCAATTCTCCTGCCT...TGTATTTCTACATTGGCCGGGCCAGTCCAGGGCTTCACCTTGGATCAGCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS GCA 90 bp TGGTTCAGTAGGCTTGGGGTGGGGCCTAGAAATCTGGATTCCGCATaGGTTCCCAGAGACCACACTTTGAGAACAAACTGGCCAACCACA +
Preference number: 5 (lower is better)
Translates to: WFSRLGVGPRNLDSA*VPRDHTLRTNWPTT
Trigger: TGTGGTTGGCCAGTTTGTTCTCAAAGTGTGGTCTCTGGGAACGCATGCGGAATCCAGATTTCTAGGCCCCACCCCAAGCCTACTGAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479231.1
CDS-3UTR CAA 90 bp TTCCCTCAGGCTGAGTCCCTTCGCTCTTGGAAGTCTGCTTGTTCCAGCAGGACTGGCCAGAACGTTCACTaGACCCACAAAAACAAAGGC +
Preference number: 5 (lower is better)
Translates to: FPQAESLRSWKSACSSRTGQNVH*THKNKG
Trigger: GCCTTTGTTTTTGTGGGTCAAGTGAACGTTCTGGCC...AGTCCTGCTGGAACAAGCAGACTTCCAAGAGCGAAGGGACTCAGCCTGAGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR CAA 90 bp TTTCTCAGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTATATGTCAGCATGAAGTaGATGGTGACGATGGGGGCC +
Preference number: 5 (lower is better)
Translates to: FLRLEKQLHEGPELGSTVYVSMK*MVTMGA
Trigger: GGCCCCCATCGTCACCATCAACTTCATGCTGACATA...TACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCTGAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp AGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTACATGGGAAAGAAGGAGGGGATTaGAGGTCCAAGAGGAAGCTA +
Preference number: 5 (lower is better)
Translates to: RLEKQLHEGPELGSTVHGKEGGD*RSKRKL
Trigger: TAGCTTCCTCTTGGACCTCAAATCCCCTCCTTCTTT...CCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp CAGAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCTGGACTCTGATTGGTaGCACAGCTCAGGAACAAGT +
Preference number: 5 (lower is better)
Translates to: QRLAPFLMSPWVRRGPQNLDSDW*HSSGTS
Trigger: ACTTGTTCCTGAGCTGTGCAACCAATCAGAGTCCAG...ATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp GCTTTCTCTAAGAGCAGGTGCTCAGAGCAGTGGAGGCCTTCTGCGCCCTCCCTGAAATGTAGATTTCCATaGTCCAAAGTGACAGCGGGA +
Preference number: 5 (lower is better)
Translates to: AFSKSRCSEQWRPSAPSLKCRFP*SKVTAG
Trigger: TCCCGCTGTCACTTTGGACAATGGAAATCTACATTT...CAGGGAGGGCGCAGAAGGCCTCCACTGCTCTGAGCACCTGCTCTTAGAGAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR CAA 90 bp GTGTCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGAGACTGGGTGTCGTGTaGCAGAGGCTAGCACCATTC +
Preference number: 5 (lower is better)
Translates to: VSPASLSTCIELFRLGVVRLGVV*QRLAPF
Trigger: GAATGGTGCTAGCCTCTGCAACACGACACCCAGTCT...CACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp TTTCTCAGGTTGGAGAAGCAGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTATGGTTGTGCAGAGTCTaGGTGTCCCCTGCTAGTCTT +
Preference number: 5 (lower is better)
Translates to: FLRLEKQLHEGPELGSTVWLCRV*VSPASL
Trigger: AAGACTAGCAGGGGACACCAAGACTCTGCACAACCA...TACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCTGCTTCTCCAACCTGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp CAGAGGCTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATAGGCGGATTATCCATTaGACACCTGCGAGGTTAATG +
Preference number: 5 (lower is better)
Translates to: QRLAPFLMSPWVRRGPQNRRIIH*TPARLM
Trigger: CATTAACCTCGCAGGTGTCAAATGGATAATCCGCCT...ATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAGCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp GCCCAAAAGGAACAGGAAGCCCATGAGGGATACCTTTTCCGCTATCAGGAAGTCTATGTCAGCATGAAGTaGATGGTGACGATGGGGGCC +
Preference number: 5 (lower is better)
Translates to: AQKEQEAHEGYLFRYQEVYVSMK*MVTMGA
Trigger: GGCCCCCATCGTCACCATCAACTTCATGCTGACATA...GACTTCCTGATAGCGGAAAAGGTATCCCTCATGGGCTTCCTGTTCCTTTTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR CAA 90 bp TTCCCTCAGGCTGAGTCCCTTCGCTCTTGGAAGTCTGCTTGTTCCAGCAGGACTAAAGAAGGAGGGGATTaGAGGTCCAAGAGGAAGCTA +
Preference number: 5 (lower is better)
Translates to: FPQAESLRSWKSACSSRTKEGGD*RSKRKL
Trigger: TAGCTTCCTCTTGGACCTCAAATCCCCTCCTTCTTT...AGTCCTGCTGGAACAAGCAGACTTCCAAGAGCGAAGGGACTCAGCCTGAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR CAA 90 bp CTAGCACCATTCCTGATGTCACCCTGGGTGAGACGTGGTCCTCAGAATCCAGATCAGCTCAGGAACAAGTaGCTCTCCATATGTTCCCTC +
Preference number: 5 (lower is better)
Translates to: LAPFLMSPWVRRGPQNPDQLRNK*LSICSL
Trigger: GAGGGAACATATGGAGAGCAACTTGTTCCTGAGCTG...ATCTGGATTCTGAGGACCACGTCTCACCCAGGGTGACATCAGGAATGGTGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp CCCCCAACAGGGAGACCCAGGGGTTGCACATGTGGGTATAGAAAGAAGTGGATCTCTTCTCCAGACATCTaGTTCTTGGAGCCTGGACTT +
Preference number: 5 (lower is better)
Translates to: PPTGRPRGCTCGYRKKWISSPDI*FLEPGL
Trigger: AAGTCCAGGCTCCAAGAACAAGATGTCTGGAGAAGA...GATCCACTTCTTTCTATACCCACATGTGCAACCCCTGGGTCTCCCTGTTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR CAA 90 bp TCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGTTGGCTGAGGCAGGAGAATaGCTTGAACTCGGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: SPASLSTCIELFRLGVVLAEAGE*LELGKQ
Trigger: CTGCTTCCCGAGTTCAAGCAATTCTCCTGCCTCAGC...CAACACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS CCA 90 bp TGGTTTCAGCTGAATCCACCACCACATTTCATATGGATTGCACAGTaGTCCTCAAATGAAGCGTCTGCCAGACTCAGCTGCAGGGCTTGC +
Preference number: 5 (lower is better)
Translates to: WFQLNPPPHFIWIAQ*SSNEASARLSCRAC
Trigger: GCAAGCCCTGCAGCTGAGTCTGGCAGACGCTTCATTTGAGGACCACTGTGCAATCCATATGAAATGTGGTGGTGGATTCAGCTGAAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479231.1
CDS-3UTR CAA 90 bp TGTAGATTTCCATTGTCCAAAGTGACAGCGGGAGGATGGGTCTTGAGTTTCTCACCACGGGTGTTTTGTTaGGCCCCTTCCCTTGTCCCA +
Preference number: 5 (lower is better)
Translates to: CRFPLSKVTAGGWVLSFSPRVFC*APSLVP
Trigger: TGGGACAAGGGAAGGGGCCAAACAAAACACCCGTGG...TGAGAAACTCAAGACCCATCCTCCCGCTGTCACTTTGGACAATGGAAATCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp GTGTCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGGGCCAGAACGTTCACTaGACCCACAAAAACAAAGGC +
Preference number: 5 (lower is better)
Translates to: VSPASLSTCIELFRLGVVGQNVH*THKNKG
Trigger: GCCTTTGTTTTTGTGGGTCAAGTGAACGTTCTGGCC...CACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp CCTCTGCACAAGCAATCTGGTTGTGCAGAGTCTTGGTGTCCCCTGCTAGTCTTATCTTGTAGGGTCTGCTaGGTGGCCTTCTTGCTTTTC +
Preference number: 5 (lower is better)
Translates to: PLHKQSGCAESWCPLLVLSCRVC*VAFLLF
Trigger: GAAAAGCAAGAAGGCCACCAAGCAGACCCTACAAGA...TAAGACTAGCAGGGGACACCAAGACTCTGCACAACCAGATTGCTTGTGCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp TCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGTTGAGGCAGGAGAATTGCTaGAACTCGGGAAGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: SPASLSTCIELFRLGVVLRQENC*NSGSRG
Trigger: ACCTCTGCTTCCCGAGTTCAAGCAATTCTCCTGCCT...CAACACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS TCA 90 bp TATTCCCGAGGCCCAGCAAATCCGAGATGGATTCAGCAAAGCCGGTaGTATACATGGCACCTGCAACACACTGTCCAAACACATAGAGCA +
Preference number: 5 (lower is better)
Translates to: YSRGPANPRWIQQSR*YTWHLQHTVQTHRA
Trigger: TGCTCTATGTGTTTGGACAGTGTGTTGCAGGTGCCATGTATATCACCGGCTTTGCTGAATCCATCTCGGATTTGCTGGGCCTCGGGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393469.8
ENST00000469902.6
CDS CCA 90 bp CCCACAAGAAGGCTGAGCTTATCAGTTATAATCGGCGCGATGCATTaGTTTCGCCACAGGCACTTGCATCACCAGCTCCTAATCTCTAGA +
Preference number: 5 (lower is better)
Translates to: PTRRLSLSVIIGAMH*FRHRHLHHQLLISR
Trigger: TCTAGAGATTAGGAGCTGGTGATGCAAGTGCCTGTGGCGAAACCAATGCATCGCGCCGATTATAACTGATAAGCTCAGCCTTCTTGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479352.5
CDS-3UTR CAA 90 bp CCTCTGCACAAGCAATCTGGTTGTGCAGAGTCTTGGTGTCCCCTGCTAGTCTTAAGGCGGATTATCCATTaGACACCTGCGAGGTTAATG +
Preference number: 5 (lower is better)
Translates to: PLHKQSGCAESWCPLLVLRRIIH*TPARLM
Trigger: CATTAACCTCGCAGGTGTCAAATGGATAATCCGCCT...TAAGACTAGCAGGGGACACCAAGACTCTGCACAACCAGATTGCTTGTGCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp TCCCCTGCTAGTCTTAGTACCTGTATAGAGCTCTTCAGACTGGGTGTCGTGTTGTCTTGTAGGGTCTGCTaGGTGGCCTTCTTGCTTTTC +
Preference number: 5 (lower is better)
Translates to: SPASLSTCIELFRLGVVLSCRVC*VAFLLF
Trigger: GAAAAGCAAGAAGGCCACCAAGCAGACCCTACAAGA...CAACACGACACCCAGTCTGAAGAGCTCTATACAGGTACTAAGACTAGCAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp CAAGCAATCTGGTTGTGCAGAGTCTTGGTGTCCCCTGCTAGTCTTAGTACCTGTCAGCTCAGGAACAAGTaGCTCTCCATATGTTCCCTC +
Preference number: 5 (lower is better)
Translates to: QAIWLCRVLVSPASLSTCQLRNK*LSICSL
Trigger: GAGGGAACATATGGAGAGCAACTTGTTCCTGAGCTG...ACAGGTACTAAGACTAGCAGGGGACACCAAGACTCTGCACAACCAGATTGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp CCTCTGCACAAGCAATCTGGTTGTGCAGAGTCTTGGTGTCCCCTGCTAGTCTTATCTTCTCCAGACATCTaGTTCTTGGAGCCTGGACTT +
Preference number: 5 (lower is better)
Translates to: PLHKQSGCAESWCPLLVLSSPDI*FLEPGL
Trigger: AAGTCCAGGCTCCAAGAACAAGATGTCTGGAGAAGA...TAAGACTAGCAGGGGACACCAAGACTCTGCACAACCAGATTGCTTGTGCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp TTCAGGAAGAAATCTTCTCCACTGGACTCTGATTGGTTGCACAGCTCAGGAACAAGACTGGGTGTCGTGTaGCAGAGGCTAGCACCATTC +
Preference number: 5 (lower is better)
Translates to: FRKKSSPLDSDWLHSSGTRLGVV*QRLAPF
Trigger: GAATGGTGCTAGCCTCTGCAACACGACACCCAGTCT...TGTTCCTGAGCTGTGCAACCAATCAGAGTCCAGTGGAGAAGATTTCTTCCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS TCA 90 bp GAATCCACCACCACATTTCATATGGATTGCACAGTGGTCCTCAAATaGAGCGTCTGCCAGACTCAGCTGCAGGGCTTGCTAAACACAAAC +
Preference number: 5 (lower is better)
Translates to: ESTTTFHMDCTVVLK*SVCQTQLQGLLNTN
Trigger: GTTTGTGTTTAGCAAGCCCTGCAGCTGAGTCTGGCAGACGCTTCATTTGAGGACCACTGTGCAATCCATATGAAATGTGGTGGTGGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479231.1
CDS-3UTR CAA 90 bp CAGGTGGAGAATAAGGATTGGAGGGAGACTTTTCACTCTATATATCTTTTGGGTGTTTGGCCCCTTCCCTaGTCCCAGACAGGCAAGTGC +
Preference number: 5 (lower is better)
Translates to: QVENKDWRETFHSIYLLGVWPLP*SQTGKC
Trigger: GCACTTGCCTGTCTGGGACAAGGGAAGGGGCCAAAC...ACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCCAATCCTTATTCTCCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp GAAGGTCCTGAGCTTGGGTCCACTGTACATGGGACAGCTCCAAAAGAGGAAGGTAAATGTAGATTTCCATaGTCCAAAGTGACAGCGGGA +
Preference number: 5 (lower is better)
Translates to: EGPELGSTVHGTAPKEEGKCRFP*SKVTAG
Trigger: TCCCGCTGTCACTTTGGACAATGGAAATCTACATTT...ACCTTCCTCTTTTGGAGCTGTCCCATGTACAGTGGACCCAAGCTCAGGACCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp AGAGCTCTTCAGACTGGGTGTCGTGTTGCAGAGGCTAGCACCATTCCTGATGTCAAATGTAGATTTCCATaGTCCAAAGTGACAGCGGGA +
Preference number: 5 (lower is better)
Translates to: RALQTGCRVAEASTIPDVKCRFP*SKVTAG
Trigger: TCCCGCTGTCACTTTGGACAATGGAAATCTACATTT...GACATCAGGAATGGTGCTAGCCTCTGCAACACGACACCCAGTCTGAAGAGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp TGTAGATTTCCATTGTCCAAAGTGACAGCGGGAGGATGGGTCTTGAGTTTCTCATGGTTGTGCAGAGTCTaGGTGTCCCCTGCTAGTCTT +
Preference number: 5 (lower is better)
Translates to: CRFPLSKVTAGGWVLSFSWLCRV*VSPASL
Trigger: AAGACTAGCAGGGGACACCAAGACTCTGCACAACCA...TGAGAAACTCAAGACCCATCCTCCCGCTGTCACTTTGGACAATGGAAATCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS CCA 90 bp CCATTCATTCCATGGTTTCAGCTGAATCCACCACCACATTTCATATaGATTGCACAGTGGTCCTCAAATGAAGCGTCTGCCAGACTCAGC +
Preference number: 5 (lower is better)
Translates to: PFIPWFQLNPPPHFI*IAQWSSNEASARLS
Trigger: GCTGAGTCTGGCAGACGCTTCATTTGAGGACCACTGTGCAATCCATATGAAATGTGGTGGTGGATTCAGCTGAAACCATGGAATGAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479231.1
CDS-3UTR CAA 90 bp TGTAGATTTCCATTGTCCAAAGTGACAGCGGGAGGATGGGTCTTGAGTTTCTCAGGCCAGAACGTTCACTaGACCCACAAAAACAAAGGC +
Preference number: 5 (lower is better)
Translates to: CRFPLSKVTAGGWVLSFSGQNVH*THKNKG
Trigger: GCCTTTGTTTTTGTGGGTCAAGTGAACGTTCTGGCC...TGAGAAACTCAAGACCCATCCTCCCGCTGTCACTTTGGACAATGGAAATCTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp GTTAACCAGGGTATACACCCACTGTATCACAAACATGATGAGAAGGGACCCAACTCTTGTAGGGTCTGCTaGGTGGCCTTCTTGCTTTTC +
Preference number: 5 (lower is better)
Translates to: VNQGIHPLYHKHDEKGPNSCRVC*VAFLLF
Trigger: GAAAAGCAAGAAGGCCACCAAGCAGACCCTACAAGA...GTTGGGTCCCTTCTCATCATGTTTGTGATACAGTGGGTGTATACCCTGGTTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR CAA 90 bp TTCTCCAGACATCTTGTTCTTGGAGCCTGGACTTCAGGAAGAAATCTTCTCCACCAGCTCAGGAACAAGTaGCTCTCCATATGTTCCCTC +
Preference number: 5 (lower is better)
Translates to: FSRHLVLGAWTSGRNLLHQLRNK*LSICSL
Trigger: GAGGGAACATATGGAGAGCAACTTGTTCCTGAGCTG...GTGGAGAAGATTTCTTCCTGAAGTCCAGGCTCCAAGAACAAGATGTCTGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR CAA 90 bp CATGTTAACCAGGGTATACACCCACTGTATCACAAACATGATGAGAAGGGACCCCTGGACTCTGATTGGTaGCACAGCTCAGGAACAAGT +
Preference number: 5 (lower is better)
Translates to: HVNQGIHPLYHKHDEKGPLDSDW*HSSGTS
Trigger: ACTTGTTCCTGAGCTGTGCAACCAATCAGAGTCCAG...GGGTCCCTTCTCATCATGTTTGTGATACAGTGGGTGTATACCCTGGTTAACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS-3UTR CAA 90 bp AAACATACACTTATTGTGGCCCTCTGCACAAGCAATCTGGTTGTGCAGAGTCTTTGGTTGTGCAGAGTCTaGGTGTCCCCTGCTAGTCTT +
Preference number: 5 (lower is better)
Translates to: KHTLIVALCTSNLVVQSLWLCRV*VSPASL
Trigger: AAGACTAGCAGGGGACACCAAGACTCTGCACAACCA...AAGACTCTGCACAACCAGATTGCTTGTGCAGAGGGCCACAATAAGTGTATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp AGCTCCACGAAGGTCCTGAGCTTGGGTCCACTGTACATGGGACAGCTCCAAAAGTGTCATTGCAAAAGATaGGAAAGAATCCAAATGCTC +
Preference number: 5 (lower is better)
Translates to: SSTKVLSLGPLYMGQLQKCHCKR*ERIQML
Trigger: GAGCATTTGGATTCTTTCCAATCTTTTGCAATGACA...CTTTTGGAGCTGTCCCATGTACAGTGGACCCAAGCTCAGGACCTTCGTGGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CAA 90 bp TGTAGATTTCCATTGTCCAAAGTGACAGCGGGAGGATGGGTCTTGAGTTTCTCATCTTCTCCAGACATCTaGTTCTTGGAGCCTGGACTT +
Preference number: 5 (lower is better)
Translates to: CRFPLSKVTAGGWVLSFSSSPDI*FLEPGL
Trigger: AAGTCCAGGCTCCAAGAACAAGATGTCTGGAGAAGA...TGAGAAACTCAAGACCCATCCTCCCGCTGTCACTTTGGACAATGGAAATCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp GGAGGGAGACTTTTCACTCTATATATCTTTTGGGTGTGGAAACATGTGAGTGTAACGAAGGTCCTGAGCTaGGGTCCACTGTACATGGGA +
Preference number: 5 (lower is better)
Translates to: GGRLFTLYIFWVWKHVSVTKVLS*GPLYMG
Trigger: TCCCATGTACAGTGGACCCAAGCTCAGGACCTTCGT...TACACTCACATGTTTCCACACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS TCA 90 bp AATCGGGCAGCGTGTTGTTCTGTAGCAGTTCGGGTGAATATCCAATaGAACCATGTTCATGCTGTATGCACCCTTCTTCTTGTGATGATG +
Preference number: 5 (lower is better)
Translates to: NRAACCSVAVRVNIQ*NHVHAVCTLLLVMM
Trigger: CATCATCACAAGAAGAAGGGTGCATACAGCATGAACATGGTTTCATTGGATATTCACCCGAACTGCTACAGAACAACACGCTGCCCGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485849.1
CDS-3UTR CAA 90 bp TTTGATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGCTGTTTGGCCCCTTCCCTaGTCCCAGACAGGCAAGTGC +
Preference number: 5 (lower is better)
Translates to: FDPAIPLLGIYPRDTLYAVWPLP*SQTGKC
Trigger: GCACTTGCCTGTCTGGGACAAGGGAAGGGGCCAAAC...AGCATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CAA 90 bp AAACATACACTTATTGTGGCCCTCTGCACAAGCAATCTGGTTGTGCAGAGTCTTAAAGAAGGAGGGGATTaGAGGTCCAAGAGGAAGCTA +
Preference number: 5 (lower is better)
Translates to: KHTLIVALCTSNLVVQSLKEGGD*RSKRKL
Trigger: TAGCTTCCTCTTGGACCTCAAATCCCCTCCTTCTTT...AAGACTCTGCACAACCAGATTGCTTGTGCAGAGGGCCACAATAAGTGTATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp GATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGCTTGCGCTGAGGCAGGAGAATaGCTTGAACTCGGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: DPAIPLLGIYPRDTLYACAEAGE*LELGKQ
Trigger: CTGCTTCCCGAGTTCAAGCAATTCTCCTGCCTCAGC...GCAAGCATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CAA 90 bp GATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGCTTGCAGGCAGGAGAATTGCTaGAACTCGGGAAGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: DPAIPLLGIYPRDTLYACRQENC*NSGSRG
Trigger: ACCTCTGCTTCCCGAGTTCAAGCAATTCTCCTGCCT...GCAAGCATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CAA 90 bp AGAGCTGATTGTCATTGCAAAAGATTGGAAAGAATCCAAATGCTCATCATTGTGAGACTGGGTGTCGTGTaGCAGAGGCTAGCACCATTC +
Preference number: 5 (lower is better)
Translates to: RADCHCKRLERIQMLIIVRLGVV*QRLAPF
Trigger: GAATGGTGCTAGCCTCTGCAACACGACACCCAGTCT...CACAATGATGAGCATTTGGATTCTTTCCAATCTTTTGCAATGACAATCAGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CAA 90 bp GATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGCTTGCGCACAAGCAATCTGGTaGTGCAGAGTCTTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: DPAIPLLGIYPRDTLYACAQAIW*CRVLVS
Trigger: GGACACCAAGACTCTGCACAACCAGATTGCTTGTGC...GCAAGCATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS CCA 90 bp ATCAGAATGAGAGAAAGGCCAGTCATGAAGCTTCCCCAGCTGGCTTaGGAGGACACTTTTTGTACTATTTCTCTTCTGGCATATTTCTTA +
Preference number: 5 (lower is better)
Translates to: IRMRERPVMKLPQLA*EDTFCTISLLAYFL
Trigger: TAAGAAATATGCCAGAAGAGAAATAGTACAAAAAGTGTCCTCCCAAGCCAGCTGGGGAAGCTTCATGACTGGCCTTTCTCTCATTCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485954.5
CDS-3UTR CAA 90 bp GGAGGGAGACTTTTCACTCTATATATCTTTTGGGTGTGGAAACATGTGAGTGTATCTTCTCCAGACATCTaGTTCTTGGAGCCTGGACTT +
Preference number: 5 (lower is better)
Translates to: GGRLFTLYIFWVWKHVSVSSPDI*FLEPGL
Trigger: AAGTCCAGGCTCCAAGAACAAGATGTCTGGAGAAGA...TACACTCACATGTTTCCACACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp ATCCTAGAGATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGAGGCAGGAGAATaGCTTGAACTCGGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: ILEIHFMLAHLYKIIHCRAEAGE*LELGKQ
Trigger: CTGCTTCCCGAGTTCAAGCAATTCTCCTGCCTCAGC...TCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTATCTCTAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CAA 90 bp GGAGGGAGACTTTTCACTCTATATATCTTTTGGGTGTGGAAACATGTGAGTGTAACAACCCCAAAGATGTaGATCATGCAGGATGTGAAC +
Preference number: 5 (lower is better)
Translates to: GGRLFTLYIFWVWKHVSVTTPKM*IMQDVN
Trigger: GTTCACATCCTGCATGATCAACATCTTTGGGGTTGT...TACACTCACATGTTTCCACACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp CAGGTGGAGAATAAGGATTGGAGGGAGACTTTTCACTCTATATATCTTTTGGGTACAACCCCAAAGATGTaGATCATGCAGGATGTGAAC +
Preference number: 5 (lower is better)
Translates to: QVENKDWRETFHSIYLLGTTPKM*IMQDVN
Trigger: GTTCACATCCTGCATGATCAACATCTTTGGGGTTGT...ACCCAAAAGATATATAGAGTGAAAAGTCTCCCTCCAATCCTTATTCTCCACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS-3UTR CAA 90 bp ATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTTATGTCAGCATGAAGTaGATGGTGACGATGGGGGCC +
Preference number: 5 (lower is better)
Translates to: IHFMLAHLYKIIHCRADCYVSMK*MVTMGA
Trigger: GGCCCCCATCGTCACCATCAACTTCATGCTGACATA...ACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CAA 90 bp ATCCTAGAGATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGGCCAGAACGTTCACTaGACCCACAAAAACAAAGGC +
Preference number: 5 (lower is better)
Translates to: ILEIHFMLAHLYKIIHCRGQNVH*THKNKG
Trigger: GCCTTTGTTTTTGTGGGTCAAGTGAACGTTCTGGCC...TCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTATCTCTAGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CAA 90 bp ATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTCAGCTCAGGAACAAGTaGCTCTCCATATGTTCCCTC +
Preference number: 5 (lower is better)
Translates to: IHFMLAHLYKIIHCRADCQLRNK*LSICSL
Trigger: GAGGGAACATATGGAGAGCAACTTGTTCCTGAGCTG...ACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CAA 90 bp CCTTTTGATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATAAAGAAGGAGGGGATTaGAGGTCCAAGAGGAAGCTA +
Preference number: 5 (lower is better)
Translates to: PFDPAIPLLGIYPRDTLYKEGGD*RSKRKL
Trigger: TAGCTTCCTCTTGGACCTCAAATCCCCTCCTTCTTT...ATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATCAAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CAA 90 bp ATCCTAGAGATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAACAACCCCAAAGATGTaGATCATGCAGGATGTGAAC +
Preference number: 5 (lower is better)
Translates to: ILEIHFMLAHLYKIIHCRTTPKM*IMQDVN
Trigger: GTTCACATCCTGCATGATCAACATCTTTGGGGTTGT...TCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTATCTCTAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393469.8
ENST00000469902.6
CDS-3UTR CAA 90 bp TTTGATCCTGCAATTCCACTTTTGGGAATTTATCCTAGAGATACACTTTATGCTAAATGTAGATTTCCATaGTCCAAAGTGACAGCGGGA +
Preference number: 5 (lower is better)
Translates to: FDPAIPLLGIYPRDTLYAKCRFP*SKVTAG
Trigger: TCCCGCTGTCACTTTGGACAATGGAAATCTACATTT...AGCATAAAGTGTATCTCTAGGATAAATTCCCAAAAGTGGAATTGCAGGATCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CAA 90 bp ACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTCATTTGTCATTGCAAAAGATaGGAAAGAATCCAAATGCTC +
Preference number: 5 (lower is better)
Translates to: TLCLHICTRLFTAELIVICHCKR*ERIQML
Trigger: GAGCATTTGGATTCTTTCCAATCTTTTGCAATGACA...AATGACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS-3UTR CAA 90 bp ATACACTTTATGCTTGCACATTTGTACAAGATTATTCACTGCAGAGCTGATTGTTGTCATTGCAAAAGATaGGAAAGAATCCAAATGCTC +
Preference number: 5 (lower is better)
Translates to: IHFMLAHLYKIIHCRADCCHCKR*ERIQML
Trigger: GAGCATTTGGATTCTTTCCAATCTTTTGCAATGACA...ACAATCAGCTCTGCAGTGAATAATCTTGTACAAATGTGCAAGCATAAAGTGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000469902.6
CDS GCA 72 bp GCAGGGATCCTGGTGATCTGGACAGGGAGACTGCTCTaGTCCTGGGACAGCCAGCTCCCAGCGCCCGGCCCG +
Preference number: 6 (lower is better)
Translates to: AGILVIWTGRLL*SWDSQLPAPGP
Trigger: CGGGCCGGGCGCTGGGAGCTGGCTGTCCCAGGAGCAGAGCAGTCTCCCTGTCCAGATCACCAGGATCCCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469902.6
ENST00000481760.2
CDS GCA 72 bp CCAGGACCGAGGAGATCATGGAGTAGACGCCACCGCTaGCGATGCTGCTGCGCTCCCCGACGCCAATGCCAG +
Preference number: 6 (lower is better)
Translates to: PGPRRSWSRRHR*RCCCAPRRQCQ
Trigger: CTGGCATTGGCGTCGGGGAGCGCAGCAGCATCGGCAGCGGTGGCGTCTACTCCATGATCTCCTCGGTCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393469.8
ENST00000462437.1
ENST00000469902.6
ENST00000473262.5
ENST00000479826.1
CDS CCA 72 bp TGCCTCCCGTCTGCCCACCCAGGACCGAGGAGATCATaGAGTAGACGCCACCGCTGCCGATGCTGCTGCGCT +
Preference number: 6 (lower is better)
Translates to: CLPSAHPGPRRS*SRRHRCRCCCA
Trigger: AGCGCAGCAGCATCGGCAGCGGTGGCGTCTACTCCATGATCTCCTCGGTCCTGGGTGGGCAGACGGGAGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393469.8
ENST00000462437.1
ENST00000469902.6
ENST00000473262.5
ENST00000479826.1
CDS GCA 72 bp AGGAGATCATGGAGTAGACGCCACCGCTGCCGATGCTaGTGCGCTCCCCGACGCCAATGCCAGACAGCACCG +
Preference number: 6 (lower is better)
Translates to: RRSWSRRHRCRC*CAPRRQCQTAP
Trigger: CGGTGCTGTCTGGCATTGGCGTCGGGGAGCGCAGCAGCATCGGCAGCGGTGGCGTCTACTCCATGATCTCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393469.8
ENST00000462437.1
ENST00000469902.6
ENST00000473262.5
ENST00000479826.1
CDS GCA 72 bp CCGAGGAGATCATGGAGTAGACGCCACCGCTGCCGATaGTGCTGCGCTCCCCGACGCCAATGCCAGACAGCA +
Preference number: 6 (lower is better)
Translates to: PRRSWSRRHRCR*CCAPRRQCQTA
Trigger: TGCTGTCTGGCATTGGCGTCGGGGAGCGCAGCAGCATCGGCAGCGGTGGCGTCTACTCCATGATCTCCTCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393469.8
ENST00000462437.1
ENST00000469902.6
ENST00000473262.5
ENST00000479826.1
CDS CCA 72 bp CCGGCCATGACTCCTGAAAGACACCCAGATGGGGAATaGGGTGAGCAGCCTCCTCCACGCATCGCCTTCCCC +
Preference number: 6 (lower is better)
Translates to: PAMTPERHPDGE*GEQPPPRIAFP
Trigger: GGGGAAGGCGATGCGTGGAGGAGGCTGCTCACCCCATTCCCCATCTGGGTGTCTTTCAGGAGTCATGGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430155.6
CDS CCA 72 bp CAGGAGCAAGAGGTCCTGGGAGGTGCTGCACACTGCTaGGCTGCCTCATGGAAGAGCTCCTGCACCTGGGAC +
Preference number: 6 (lower is better)
Translates to: QEQEVLGGAAHC*AASWKSSCTWD
Trigger: GTCCCAGGTGCAGGAGCTCTTCCATGAGGCAGCCCAGCAGTGTGCAGCACCTCCCAGGACCTCTTGCTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481760.2
CDS GCA 72 bp CTGATGAGCCGAATCTGGGGGCCGAGTGTGGTGGAGTaGACGCAGGAGCAACATCTGAGTCTCCCGGAGGTG +
Preference number: 6 (lower is better)
Translates to: LMSRIWGPSVVE*TQEQHLSLPEV
Trigger: CACCTCCGGGAGACTCAGATGTTGCTCCTGCGTGCACTCCACCACACTCGGCCCCCAGATTCGGCTCATCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461616.1
CDS GCA 72 bp GTCACCAGAGCAGGAGCAAGAGGTCCTGGGAGGTGCTaGACACTGCTGGGCTGCCTCATGGAAGAGCTCCTG +
Preference number: 6 (lower is better)
Translates to: VTRAGARGPGRC*TLLGCLMEELL
Trigger: CAGGAGCTCTTCCATGAGGCAGCCCAGCAGTGTGCAGCACCTCCCAGGACCTCTTGCTCCTGCTCTGGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481760.2
CDS CAA 90 bp GGAGTGCACGCAGGAGCAACATCTGAGTCTCCCGGAGGTGCCCAGTaGTTAGGTTCCCATGCCACAATCCAGGCCCAAGCCCAGCCAGGA +
Preference number: 6 (lower is better)
Translates to: GVHAGATSESPGGAQ*LGSHATIQAQAQPG
Trigger: TCCTGGCTGGGCTTGGGCCTGGATTGTGGCATGGGAACCTAACAACTGGGCACCTCCGGGAGACTCAGATGTTGCTCCTGCGTGCACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461616.1
CDS TCA 72 bp GGCCGAGTGTGGTGGAGTGCACGCAGGAGCAACATCTaGGTCTCCCGGAGGTGCCCAGTTGTTAGGTTCCCA +
Preference number: 6 (lower is better)
Translates to: GRVWWSARRSNI*VSRRCPVVRFP
Trigger: TGGGAACCTAACAACTGGGCACCTCCGGGAGACTCAGATGTTGCTCCTGCGTGCACTCCACCACACTCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461616.1
CDS GCA 72 bp ATGGCACCTGTCCAAACACATAGAGCAGCCCGATGGTaGCTCCCGTCTGCCCACCCAGGACCGAGGAGATCA +
Preference number: 6 (lower is better)
Translates to: MAPVQTHRAARW*LPSAHPGPRRS
Trigger: TGATCTCCTCGGTCCTGGGTGGGCAGACGGGAGGCACCATCGGGCTGCTCTATGTGTTTGGACAGGTGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS CCA 72 bp CTGCAACACACTGTCCAAACACATAGAGCAGCCCGATaGTGCCTCCCGTCTGCCCACCCAGGACCGAGGAGA +
Preference number: 6 (lower is better)
Translates to: LQHTVQTHRAAR*CLPSAHPGPRR
Trigger: TCTCCTCGGTCCTGGGTGGGCAGACGGGAGGCACCATCGGGCTGCTCTATGTGTTTGGACAGTGTGTTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000462437.1
ENST00000469902.6
CDS CCA 72 bp TACATGGCACCTGTCCAAACACATAGAGCAGCCCGATaGTGCCTCCCGTCTGCCCACCCAGGACCGAGGAGA +
Preference number: 6 (lower is better)
Translates to: YMAPVQTHRAAR*CLPSAHPGPRR
Trigger: TCTCCTCGGTCCTGGGTGGGCAGACGGGAGGCACCATCGGGCTGCTCTATGTGTTTGGACAGGTGCCATGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS CAA 90 bp CCATGCCACAATCCAGGCCCAAGCCCAGCCAGGAATGGGACACCCTaGGCACCTCCCAGGACTCTGGACACTCATCCATTCTGGTACTGG +
Preference number: 6 (lower is better)
Translates to: PCHNPGPSPARNGTP*APPRTLDTHPFWYW
Trigger: CCAGTACCAGAATGGATGAGTGTCCAGAGTCCTGGGAGGTGCCAAGGGTGTCCCATTCCTGGCTGGGCTTGGGCCTGGATTGTGGCATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461616.1
CDS GCA 72 bp CAACACACTGTCCAAACACATAGAGCAGCCCGATGGTaGCTCCCGTCTGCCCACCCAGGACCGAGGAGATCA +
Preference number: 6 (lower is better)
Translates to: QHTVQTHRAARW*LPSAHPGPRRS
Trigger: TGATCTCCTCGGTCCTGGGTGGGCAGACGGGAGGCACCATCGGGCTGCTCTATGTGTTTGGACAGTGTGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000462437.1
ENST00000469902.6
CDS GCA 72 bp GAAGATGATGTACAGAAACCACGAGATGCCAACAGCTaGCAGGGAGCCCAGGGGAATGCTGGCGGCAGGCTC +
Preference number: 6 (lower is better)
Translates to: EDDVQKPRDANS*QGAQGNAGGRL
Trigger: GAGCCTGCCGCCAGCATTCCCCTGGGCTCCCTGGCAGCTGTTGGCATCTCGTGGTTTCTGTACATCATCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000465475.5
ENST00000465777.5
ENST00000469902.6
ENST00000479352.5
ENST00000479826.1
ENST00000483944.5
ENST00000495105.5
CDS GCA 72 bp CCATGTTCTGTCCAAACACATAGAGCAGCCCGATGGTaGCTCCCGTCTGCCCACCCAGGACCGAGGAGATCA +
Preference number: 6 (lower is better)
Translates to: PCSVQTHRAARW*LPSAHPGPRRS
Trigger: TGATCTCCTCGGTCCTGGGTGGGCAGACGGGAGGCACCATCGGGCTGCTCTATGTGTTTGGACAGAACATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479826.1
CDS CCA 72 bp TCCTGCTGGGCTGCCTCATGGAAGAGCTCCTGCACCTaGGACATCTGGGTCATTCTCCAGCAAGCAGGGATC +
Preference number: 6 (lower is better)
Translates to: SCWAASWKSSCT*DIWVILQQAGI
Trigger: GATCCCTGCTTGCTGGAGAATGACCCAGATGTCCCAGGTGCAGGAGCTCTTCCATGAGGCAGCCCAGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393469.8
ENST00000469902.6
CDS CCA 72 bp CACTGCTGGGCTGCCTCATGGAAGAGCTCCTGCACCTaGGACATCTGGGTCATTCTCCAGCAAGCAGGGATC +
Preference number: 6 (lower is better)
Translates to: HCWAASWKSSCT*DIWVILQQAGI
Trigger: GATCCCTGCTTGCTGGAGAATGACCCAGATGTCCCAGGTGCAGGAGCTCTTCCATGAGGCAGCCCAGCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481760.2
CDS CCA 72 bp GGCATCTTATGTCACCAGAGCAGGAGCAAGAGGTCCTaGGAGGTGCTGCACACTGCTGGGCTGCCTCATGGA +
Preference number: 6 (lower is better)
Translates to: GILCHQSRSKRS*EVLHTAGLPHG
Trigger: TCCATGAGGCAGCCCAGCAGTGTGCAGCACCTCCCAGGACCTCTTGCTCCTGCTCTGGTGACATAAGATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481760.2
CDS CAA 72 bp AATCCAGGCCCAAGCCCAGCCAGGAATGGGACACCCTaGGCACCTCCCAGGACTCTGGACACTCATCCATTC +
Preference number: 6 (lower is better)
Translates to: NPGPSPARNGTP*APPRTLDTHPF
Trigger: GAATGGATGAGTGTCCAGAGTCCTGGGAGGTGCCAAGGGTGTCCCATTCCTGGCTGGGCTTGGGCCTGGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461616.1
CDS CAA 72 bp GCAGGAGCAACATCTGAGTCTCCCGGAGGTGCCCAGTaGTTAGGTTCCCATGCCACAATCCAGGCCCAAGCC +
Preference number: 6 (lower is better)
Translates to: AGATSESPGGAQ*LGSHATIQAQA
Trigger: GGCTTGGGCCTGGATTGTGGCATGGGAACCTAACAACTGGGCACCTCCGGGAGACTCAGATGTTGCTCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461616.1
CDS CCA 72 bp GCTGCCTCATGGAAGAGCTCCTGCACCTGGGACATCTaGGTCATTCTCCAGCAAGCAGGGATCCTGGTGATC +
Preference number: 6 (lower is better)
Translates to: AASWKSSCTWDI*VILQQAGILVI
Trigger: GATCACCAGGATCCCTGCTTGCTGGAGAATGACCCAGATGTCCCAGGTGCAGGAGCTCTTCCATGAGGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000481760.2
CDS TCA 72 bp GAGGTTAATGCCCAGCAAGGCCAGAAGCACCGCAACTaGAATTCCTCGCACAGCCCAGATATTCCCGAGGCC +
Preference number: 6 (lower is better)
Translates to: EVNAQQGQKHRN*NSSHSPDIPEA
Trigger: GGCCTCGGGAATATCTGGGCTGTGCGAGGAATTTCAGTTGCGGTGCTTCTGGCCTTGCTGGGCATTAACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS TCA 72 bp ACATCTGGGTCATTCTCCAGCAAGCAGGGATCCTGGTaGTCTGGACAGGGAGACTGCTCTGCTCCTGGGACA +
Preference number: 6 (lower is better)
Translates to: TSGSFSSKQGSW*SGQGDCSAPGT
Trigger: TGTCCCAGGAGCAGAGCAGTCTCCCTGTCCAGATCACCAGGATCCCTGCTTGCTGGAGAATGACCCAGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469902.6
ENST00000481760.2
CDS GCA 72 bp CAACAGCAGCTGGAGGCGGATTATCCATTTGACACCTaGGAGGTTAATGCCCAGCAAGGCCAGAAGCACCGC +
Preference number: 6 (lower is better)
Translates to: QQQLEADYPFDT*EVNAQQGQKHR
Trigger: GCGGTGCTTCTGGCCTTGCTGGGCATTAACCTCGCAGGTGTCAAATGGATAATCCGCCTCCAGCTGCTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS CAA 90 bp CTCCTGAGGGGACCGCAAGCTCCTTCTCCACTGGACTCTGATTGGTaGCACAGCTCAGGAACAAGTTGCTCTCCATATGTTCCCTCAGGC +
Preference number: 6 (lower is better)
Translates to: LLRGPQAPSPLDSDW*HSSGTSCSPYVPSG
Trigger: GCCTGAGGGAACATATGGAGAGCAACTTGTTCCTGAGCTGTGCAACCAATCAGAGTCCAGTGGAGAAGGAGCTTGCGGTCCCCTCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465475.5
CDS TCA 72 bp CTCGAGTGCAGATGGCGCCCAGGAGGAAGACGAAGATaGTGTACAGAAACCACGAGATGCCAACAGCTGCCA +
Preference number: 6 (lower is better)
Translates to: LECRWRPGGRRR*CTETTRCQQLP
Trigger: TGGCAGCTGTTGGCATCTCGTGGTTTCTGTACATCATCTTCGTCTTCCTCCTGGGCGCCATCTGCACTCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000393469.8
ENST00000430155.6
ENST00000465475.5
ENST00000465777.5
ENST00000469902.6
ENST00000479352.5
ENST00000479826.1
ENST00000483944.5
ENST00000495105.5
CDS CCA 72 bp ACTGGCTCCAAATTGGCACAGACCAAGGTGAAGCCCTaGACTGGCCCGGCCAATGTAGAAATACACGATGGC +
Preference number: 6 (lower is better)
Translates to: TGSKLAQTKVKP*TGPANVEIHDG
Trigger: GCCATCGTGTATTTCTACATTGGCCGGGCCAGTCCAGGGCTTCACCTTGGTCTGTGCCAATTTGGAGCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461616.1
CDS CCA 72 bp CCTCCCAGGACTCTGGACACTCATCCATTCTGGTACTaGCTCCAAATTGGCACAGACCAAGGTGAAGCCCTG +
Preference number: 6 (lower is better)
Translates to: PPRTLDTHPFWY*LQIGTDQGEAL
Trigger: CAGGGCTTCACCTTGGTCTGTGCCAATTTGGAGCCAGTACCAGAATGGATGAGTGTCCAGAGTCCTGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461616.1
CDS CCA 72 bp CCAGGAATGGGACACCCTTGGCACCTCCCAGGACTCTaGACACTCATCCATTCTGGTACTGGCTCCAAATTG +
Preference number: 6 (lower is better)
Translates to: PGMGHPWHLPGL*TLIHSGTGSKL
Trigger: CAATTTGGAGCCAGTACCAGAATGGATGAGTGTCCAGAGTCCTGGGAGGTGCCAAGGGTGTCCCATTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461616.1
CDS TCA 72 bp CATGTTGAAGCCGGCCATGACTCAGTTCCACATGGCTaGGGAGGCATCACAAATCATGGCAGAAGGGGAAGG +
Preference number: 6 (lower is better)
Translates to: HVEAGHDSVPHG*GGITNHGRRGR
Trigger: CCTTCCCCTTCTGCCATGATTTGTGATGCCTCCTCAGCCATGTGGAACTGAGTCATGGCCGGCTTCAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465475.5
ENST00000483944.5
CDS TCA 72 bp CTCGAGTGCAGATGGCGCCCAGGAGGAAGACGAAGATaGTGTACAGAAACCACCTGCAAAACCCAAGAGCAG +
Preference number: 6 (lower is better)
Translates to: LECRWRPGGRRR*CTETTCKTQEQ
Trigger: CTGCTCTTGGGTTTTGCAGGTGGTTTCTGTACATCATCTTCGTCTTCCTCCTGGGCGCCATCTGCACTCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485954.5
CDS GCA 72 bp AGGCTTGGGGTGGGGCCTAGAAATCTGGATTCCGCATaGGTTCCCAGAGACCACACTTTGAGAACAAACTGG +
Preference number: 6 (lower is better)
Translates to: RLGVGPRNLDSA*VPRDHTLRTNW
Trigger: CCAGTTTGTTCTCAAAGTGTGGTCTCTGGGAACGCATGCGGAATCCAGATTTCTAGGCCCCACCCCAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479231.1
CDS CCA 72 bp CTCCAAATTGGCACAGACCAAGGTGAAGCCCTGGACTaGCCCGGCCAATGTAGAAATACACGATGGCAGCAA +
Preference number: 6 (lower is better)
Translates to: LQIGTDQGEALD*PGQCRNTRWQQ
Trigger: TTGCTGCCATCGTGTATTTCTACATTGGCCGGGCCAGTCCAGGGCTTCACCTTGGTCTGTGCCAATTTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461616.1
CDS CCA 72 bp GCTTCCAGGGAGGCCTCAGGAAACTTTCAATCATGGTaGAAGGCAAAGGCGAGGCAGGCATCTTATGTCACC +
Preference number: 6 (lower is better)
Translates to: ASREASGNFQSW*KAKARQASYVT
Trigger: GGTGACATAAGATGCCTGCCTCGCCTTTGCCTTCCACCATGATTGAAAGTTTCCTGAGGCCTCCCTGGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481760.2
CDS CCA 72 bp CAGACTCAGCTGCAGGGCTTGCTAAACACAAACTTCTaGGCCCCTCCTCAGAGTTCCTGGTTCAGTAGGCTT +
Preference number: 6 (lower is better)
Translates to: QTQLQGLLNTNF*APPQSSWFSRL
Trigger: AAGCCTACTGAACCAGGAACTCTGAGGAGGGGCCCAGAAGTTTGTGTTTAGCAAGCCCTGCAGCTGAGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479231.1
CDS CAA 72 bp AGGAACAGCAACAGCAGCTGGAGGCGGATTATCCATTaGACACCTGCGAGGTTAATGCCCAGCAAGGCCAGA +
Preference number: 6 (lower is better)
Translates to: RNSNSSWRRIIH*TPARLMPSKAR
Trigger: TCTGGCCTTGCTGGGCATTAACCTCGCAGGTGTCAAATGGATAATCCGCCTCCAGCTGCTGTTGCTGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393469.8
ENST00000469902.6
ENST00000473262.5
CDS CCA 72 bp TTGGCACCTCCCAGGACTCTGGACACTCATCCATTCTaGTACTGGCTCCAAATTGGCACAGACCAAGGTGAA +
Preference number: 6 (lower is better)
Translates to: LAPPRTLDTHPF*YWLQIGTDQGE
Trigger: TTCACCTTGGTCTGTGCCAATTTGGAGCCAGTACCAGAATGGATGAGTGTCCAGAGTCCTGGGAGGTGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461616.1
CDS CCA 72 bp TCTGCTTCCAGGGAGGCCTCAGGAAACTTTCAATCATaGTGGAAGGCAAAGGCGAGGCAGGCATCTTATGTC +
Preference number: 6 (lower is better)
Translates to: SASREASGNFQS*WKAKARQASYV
Trigger: GACATAAGATGCCTGCCTCGCCTTTGCCTTCCACCATGATTGAAAGTTTCCTGAGGCCTCCCTGGAAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481760.2
CDS CAA 72 bp ATAATCGGCGCGATGCATTGGTTTCGCCACAGGCACTaGCATCACCAGCTCCTAATCTCTAGACAGTGCTGG +
Preference number: 6 (lower is better)
Translates to: IIGAMHWFRHRH*HHQLLISRQCW
Trigger: CCAGCACTGTCTAGAGATTAGGAGCTGGTGATGCAAGTGCCTGTGGCGAAACCAATGCATCGCGCCGATTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479352.5
CDS TCA 72 bp GGCCCAGCAAATCCGAGATGGATTCAGCAAAGCCGGTaGTATACATGGCACCTGCAACACACTGTCCAAACA +
Preference number: 6 (lower is better)
Translates to: GPANPRWIQQSR*YTWHLQHTVQT
Trigger: TGTTTGGACAGTGTGTTGCAGGTGCCATGTATATCACCGGCTTTGCTGAATCCATCTCGGATTTGCTGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393469.8
ENST00000469902.6
CDS TCA 72 bp CCCCAGCCTCGCCCCCATTCATTCCATGGTTTCAGCTaGATCCACCACCACATTTCATATGGATTGCACAGT +
Preference number: 6 (lower is better)
Translates to: PQPRPHSFHGFS*IHHHISYGLHS
Trigger: ACTGTGCAATCCATATGAAATGTGGTGGTGGATTCAGCTGAAACCATGGAATGAATGGGGGCGAGGCTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479231.1
CDS TCA 72 bp GGCCCAGCAAATCCGAGATGGATTCAGCAAAGCCGGTaGTATACATGGCACCTGTCCAAACACATAGAGCAG +
Preference number: 6 (lower is better)
Translates to: GPANPRWIQQSR*YTWHLSKHIEQ
Trigger: CTGCTCTATGTGTTTGGACAGGTGCCATGTATATCACCGGCTTTGCTGAATCCATCTCGGATTTGCTGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473262.5
CDS CAA 72 bp AAGGCTGAGCTTATCAGTTATAATCGGCGCGATGCATaGGTTTCGCCACAGGCACTTGCATCACCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: KAELISYNRRDA*VSPQALASPAP
Trigger: AGGAGCTGGTGATGCAAGTGCCTGTGGCGAAACCAATGCATCGCGCCGATTATAACTGATAAGCTCAGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479352.5
CDS TCA 72 bp ACCACATTTCATATGGATTGCACAGTGGTCCTCAAATaGAGCGTCTGCCAGACTCAGCTGCAGGGCTTGCTA +
Preference number: 6 (lower is better)
Translates to: TTFHMDCTVVLK*SVCQTQLQGLL
Trigger: TAGCAAGCCCTGCAGCTGAGTCTGGCAGACGCTTCATTTGAGGACCACTGTGCAATCCATATGAAATGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479231.1
CDS CCA 72 bp CTGAATCCACCACCACATTTCATATGGATTGCACAGTaGTCCTCAAATGAAGCGTCTGCCAGACTCAGCTGC +
Preference number: 6 (lower is better)
Translates to: LNPPPHFIWIAQ*SSNEASARLSC
Trigger: GCAGCTGAGTCTGGCAGACGCTTCATTTGAGGACCACTGTGCAATCCATATGAAATGTGGTGGTGGATTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479231.1
CDS CAA 72 bp GGCTATTATTGGCCTCGAGCTCAAGCCCTCTGCTACTaGACAGTTGACCTGATAACCAAGCCAGGTACTAAG +
Preference number: 6 (lower is better)
Translates to: GYYWPRAQALCY*TVDLITKPGTK
Trigger: CTTAGTACCTGGCTTGGTTATCAGGTCAACTGTCAAGTAGCAGAGGGCTTGAGCTCGAGGCCAATAATAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485849.1
CDS CAA 72 bp GAGAGAAAGGCCAGTCATGAAGCTTCCCCAGCTGGCTaGGGAGGACACTTTTTGTACTATTTCTCTTCTGGC +
Preference number: 6 (lower is better)
Translates to: ERKASHEASPAG*GGHFLYYFSSG
Trigger: GCCAGAAGAGAAATAGTACAAAAAGTGTCCTCCCAAGCCAGCTGGGGAAGCTTCATGACTGGCCTTTCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485954.5
CDS CCA 72 bp CCATGGTTTCAGCTGAATCCACCACCACATTTCATATaGATTGCACAGTGGTCCTCAAATGAAGCGTCTGCC +
Preference number: 6 (lower is better)
Translates to: PWFQLNPPPHFI*IAQWSSNEASA
Trigger: GGCAGACGCTTCATTTGAGGACCACTGTGCAATCCATATGAAATGTGGTGGTGGATTCAGCTGAAACCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479231.1
CDS CCA 72 bp AGAGAAAGGCCAGTCATGAAGCTTCCCCAGCTGGCTTaGGAGGACACTTTTTGTACTATTTCTCTTCTGGCA +
Preference number: 6 (lower is better)
Translates to: RERPVMKLPQLA*EDTFCTISLLA
Trigger: TGCCAGAAGAGAAATAGTACAAAAAGTGTCCTCCCAAGCCAGCTGGGGAAGCTTCATGACTGGCCTTTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485954.5
CDS TCA 72 bp GCATCCTGCTGGTGTGTGAAATGCCTTTCATTTCCTTaGTCTCACTGGACTAGTCAATCAGCCTCAAGGGTA +
Preference number: 6 (lower is better)
Translates to: ASCWCVKCLSFP*SHWTSQSASRV
Trigger: TACCCTTGAGGCTGATTGACTAGTCCAGTGAGATCAAGGAAATGAAAGGCATTTCACACACCAGCAGGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462437.1
CDS TCA 72 bp GCGTGTTGTTCTGTAGCAGTTCGGGTGAATATCCAATaGAACCATGTTCATGCTGTATGCACCCTTCTTCTT +
Preference number: 6 (lower is better)
Translates to: ACCSVAVRVNIQ*NHVHAVCTLLL
Trigger: AAGAAGAAGGGTGCATACAGCATGAACATGGTTTCATTGGATATTCACCCGAACTGCTACAGAACAACACGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485849.1
CDS CAA 90 bp TATCAGAATGAGAGAAAGGCCAGTCATGAAGCTTCCCCAGCTGGCTaGGGAGGACACTTTTTGTACTATTTCTCTTCTGGCATATTTCTT +
Preference number: 6 (lower is better)
Translates to: YQNERKASHEASPAG*GGHFLYYFSSGIFL
Trigger: AAGAAATATGCCAGAAGAGAAATAGTACAAAAAGTGTCCTCCCAAGCCAGCTGGGGAAGCTTCATGACTGGCCTTTCTCTCATTCTGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485954.5
CDS GCA 72 bp AGCAGTTCGGGTGAATATCCAATGAAACCATGTTCATaGTGTATGCACCCTTCTTCTTGTGATGATGTAAGA +
Preference number: 6 (lower is better)
Translates to: SSSGEYPMKPCS*CMHPSSCDDVR
Trigger: TCTTACATCATCACAAGAAGAAGGGTGCATACAGCATGAACATGGTTTCATTGGATATTCACCCGAACTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485849.1