RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC12A5 (Homo sapiens)

Ensembl gene IDs: ENSG00000124140

Ensembl transcript IDs: ENST00000243964.7, ENST00000372315.4, ENST00000413737.2, ENST00000428198.1, ENST00000454036.6, ENST00000539566.3, ENST00000608944.5, ENST00000616201.4, ENST00000616202.4, ENST00000616933.4, ENST00000622711.4, ENST00000625683.2, ENST00000626144.1, ENST00000626695.1, ENST00000626701.1, ENST00000626937.2, ENST00000627290.2, ENST00000628272.1, ENST00000628413.1, ENST00000629054.2, ENST00000637863.1

Found 939 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCAGATaGGGACGGGGGAGGAACATCACGGGCGGCTCTGGGGCCTCTCAG +
Preference number: 1 (lower is better)
Translates to: RRRRLGPSGETGAAR*GRGRNITGGSGASQ
Trigger: CTGAGAGGCCCCAGAGCCGCCCGTGATGTTCCTCCCCCGTCCCCATCTGGCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR CCA 90 bp GGCCACCGCGCCTTCTCTAAGGACAGAGCACGCCTCAGACCAGGCTaGTGGAGCGGAAGGGCCAAGGATGAGCTGGGGAAGCCAAAGGCC +
Preference number: 1 (lower is better)
Translates to: GHRAFSKDRARLRPG*WSGRAKDELGKPKA
Trigger: GGCCTTTGGCTTCCCCAGCTCATCCTTGGCCCTTCCGCTCCACCAGCCTGGTCTGAGGCGTGCTCTGTCCTTAGAGAAGGCGCGGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR GCA 90 bp GAGGTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCTCTGGGAGGTaGGTGAGATGTCAAGCTAGGTGCGCAGGTCAGGGCCCTGGGGCT +
Preference number: 1 (lower is better)
Translates to: EVVRSGLLSGASSGR*VRCQARCAGQGPGA
Trigger: AGCCCCAGGGCCCTGACCTGCGCACCTAGCTTGACATCTCACGCACCTCCCAGAGCTGGCGCCACTGAGTAATCCGGACCTCACCACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR GCA 90 bp GGTCAGGGCCCTGGGGCTGGAGGTACTGTACCCAGTCCCAGATGGTaGTGGAACGAGCATGCAGTGCCTGACCCCCTTAGTAATGTGCCC +
Preference number: 1 (lower is better)
Translates to: GQGPGAGGTVPSPRW*WNEHAVPDPLSNVP
Trigger: GGGCACATTACTAAGGGGGTCAGGCACTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAGCCCCAGGGCCCTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR GCA 90 bp AAGGCCCCAGCTCCTCTCCTTTCCGCGCCTTCTCCCAACCTTTATTaGAGCGTCTCCTCCGGCGAGACGAGGCCGGGCTTAGAAAAAGGG +
Preference number: 1 (lower is better)
Translates to: KAPAPLLSAPSPNLY*SVSSGETRPGLEKG
Trigger: CCCTTTTTCTAAGCCCGGCCTCGTCTCGCCGGAGGAGACGCTGCAATAAAGGTTGGGAGAAGGCGCGGAAAGGAGAGGAGCTGGGGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR GCA 90 bp GATGGTGCTGGAACGAGCATGCAGTGCCTGACCCCCTTAGTAATGTaGCCTAGGGGAAGGGAACCCGGCCACCGCGCCTTCTCTAAGGAC +
Preference number: 1 (lower is better)
Translates to: DGAGTSMQCLTPLVM*PRGREPGHRAFSKD
Trigger: GTCCTTAGAGAAGGCGCGGTGGCCGGGTTCCCTTCCCCTAGGGCACATTACTAAGGGGGTCAGGCACTGCATGCTCGTTCCAGCACCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR CCA 90 bp GGTGGAGCGGAAGGGCCAAGGATGAGCTGGGGAAGCCAAAGGCCCTaGGTCCTAGTTAGAGGAGAGCAGACAGGCGCTAAGGACAAAGCG +
Preference number: 1 (lower is better)
Translates to: GGAEGPRMSWGSQRP*VLVRGEQTGAKDKA
Trigger: CGCTTTGTCCTTAGCGCCTGTCTGCTCTCCTCTAACTAGGACCCAGGGCCTTTGGCTTCCCCAGCTCATCCTTGGCCCTTCCGCTCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR CCA 90 bp GCCACACCTGACGCTGTCTGGGTGGCGCCAGCTCCAGCTCTGCCTTaGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGTGG +
Preference number: 1 (lower is better)
Translates to: ATPDAVWVAPAPALP*AQRKRGGEVRITQW
Trigger: CCACTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAGGCAGAGCTGGAGCTGGCGCCACCCAGACAGCGTCAGGTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR GCA 90 bp GAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGTaGCTGACCCCCTTAGTAATGTGCCCTAGGGGAAGGGAACCCGGC +
Preference number: 1 (lower is better)
Translates to: EVLYPVPDGAGTSMQ*LTPLVMCPRGREPG
Trigger: GCCGGGTTCCCTTCCCCTAGGGCACATTACTAAGGGGGTCAGGCACTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR CCA 90 bp GAGGTTGCTCGCGTCTCTGCAGCCGCAGTGGAAGCTCACGTCCGCTaGGAGGCGAATCCAGGAAAAGTTGGACCCTTGTCTCACCTCATC +
Preference number: 1 (lower is better)
Translates to: EVARVSAAAVEAHVR*EANPGKVGPLSHLI
Trigger: GATGAGGTGAGACAAGGGTCCAACTTTTCCTGGATTCGCCTCCCAGCGGACGTGAGCTTCCACTGCGGCTGCAGAGACGCGAGCAACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR GCA 90 bp CCCTTATTCTTCTCTGCCACCGACTTGTCCTTGGTCCAGGTGAGATaGACCTTCTCCGGATCTGTCTCCCCTTCCCCCTCAGGCTCCTCC +
Preference number: 1 (lower is better)
Translates to: PLFFSATDLSLVQVR*TFSGSVSPSPSGSS
Trigger: GGAGGAGCCTGAGGGGGAAGGGGAGACAGATCCGGAGAAGGTGCATCTCACCTGGACCAAGGACAAGTCGGTGGCAGAGAAGAATAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR CCA 90 bp CCAGGAAAAGTTGGACCCTTGTCTCACCTCATCTCGGAAAAGGACTaGAGAGGAGGGTGGGAAGCCAAGGGCGCGCGGAAAGGGCGAAGA +
Preference number: 1 (lower is better)
Translates to: PGKVGPLSHLISEKD*RGGWEAKGARKGRR
Trigger: TCTTCGCCCTTTCCGCGCGCCCTTGGCTTCCCACCCTCCTCTCCAGTCCTTTTCCGAGATGAGGTGAGACAAGGGTCCAACTTTTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR TCA 90 bp CAGAGAAGCGCTCAGGGTTCCCAGGAAACATGGAAACGTTCTTGGTaGCCAGCAGGGCTAAGTGGCCAGCTGTGGTTTCCCGGACCAGCT +
Preference number: 1 (lower is better)
Translates to: QRSAQGSQETWKRSW*PAGLSGQLWFPGPA
Trigger: AGCTGGTCCGGGAAACCACAGCTGGCCACTTAGCCCTGCTGGTCACCAAGAACGTTTCCATGTTTCCTGGGAACCCTGAGCGCTTCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR GCA 90 bp CTTGATGCCCTCAGAGGAGACAGGACTGGGGCCCTTATTCTTCTCTaGCACCGACTTGTCCTTGGTCCAGGTGAGATGCACCTTCTCCGG +
Preference number: 1 (lower is better)
Translates to: LDALRGDRTGALILL*HRLVLGPGEMHLLR
Trigger: CCGGAGAAGGTGCATCTCACCTGGACCAAGGACAAGTCGGTGGCAGAGAAGAATAAGGGCCCCAGTCCTGTCTCCTCTGAGGGCATCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR CCA 90 bp ATAAGAGCCGATGAGAAGAGGTTGCTCGCGTCTCTGCAGCCGCAGTaGAAGCTCACGTCCGCTGGGAGGCGAATCCAGGAAAAGTTGGAC +
Preference number: 1 (lower is better)
Translates to: IRADEKRLLASLQPQ*KLTSAGRRIQEKLD
Trigger: GTCCAACTTTTCCTGGATTCGCCTCCCAGCGGACGTGAGCTTCCACTGCGGCTGCAGAGACGCGAGCAACCTCTTCTCATCGGCTCTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR CCA 90 bp ATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCTGTaGTGTTCAGAGGGAGGTCTACTGAAGGATGCAGGGGGCTGGTGT +
Preference number: 1 (lower is better)
Translates to: ISSGIFRPPEGRTWL*CSEGGLLKDAGGWC
Trigger: ACACCAGCCCCCTGCATCCTTCAGTAGACCTCCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR CCA 90 bp CCCATAGCCGTGTGGTCACCGTCTCATTTCCTTCCCAAGCCAGCTTaGCACAGACATCAAAGCCATGGCGAGACAGCGTGCGGTTACCCA +
Preference number: 1 (lower is better)
Translates to: PIAVWSPSHFLPKPA*HRHQSHGETACGYP
Trigger: TGGGTAACCGCACGCTGTCTCGCCATGGCTTTGATGTCTGTGCCAAGCTGGCTTGGGAAGGAAATGAGACGGTGACCACACGGCTATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR GCA 90 bp AGGCAGGACCTGGCTGTGGTGTTCAGAGGGAGGTCTACTGAAGGATaGAGGGGGCTGGTGTCTAACACCTCCAGCTTCCTGATTGAGTAC +
Preference number: 1 (lower is better)
Translates to: RQDLAVVFRGRSTEG*RGLVSNTSSFLIEY
Trigger: GTACTCAATCAGGAAGCTGGAGGTGTTAGACACCAGCCCCCTGCATCCTTCAGTAGACCTCCCTCTGAACACCACAGCCAGGTCCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR CCA 90 bp GGAAGGAGAGGGTCCAGTGGTAATATCGAAAGCGTGGCCTCCAGTTaGGTGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACAA +
Preference number: 1 (lower is better)
Translates to: GRRGSSGNIESVASS*VSSAASALHRPDSQ
Trigger: TTGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGAGGCCACGCTTTCGATATTACCACTGGACCCTCTCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
3UTR GCA 90 bp GTTTTTGTTGTGGGATGTCTGTTTCATCAACGGAAACTTTGCTCTTaGCAACCAGACAATCTGGGCCCAGATAGTGCAACTTTGGTTCCC +
Preference number: 1 (lower is better)
Translates to: VFVVGCLFHQRKLCS*QPDNLGPDSATLVP
Trigger: GGGAACCAAAGTTGCACTATCTGGGCCCAGATTGTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATGAAACAGACATCCCACAACAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR GCA 90 bp ACTTGGGTTTTTGTTGTGGGATGTCTGTTTCATCAACGGAAACTTTaGTCTTGCCAACCAGACAATCTGGGCCCAGATAGTGCAACTTTG +
Preference number: 1 (lower is better)
Translates to: TWVFVVGCLFHQRKL*SCQPDNLGPDSATL
Trigger: CAAAGTTGCACTATCTGGGCCCAGATTGTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATGAAACAGACATCCCACAACAAAAACCCAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR TCA 90 bp GGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACTaGACACTTACACTGAAAATTAAAGGCAGGCCTAATAATAATAGC +
Preference number: 1 (lower is better)
Translates to: GTKNTRSILRQDAAY*TLTLKIKGRPNNNS
Trigger: GCTATTATTATTAGGCCTGCCTTTAATTTTCAGTGTAAGTGTTCAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
3UTR CCA 90 bp GTGATAACATTCATAACAAATATTGCACATGTAGCACAGAAAACTTaGGTTTTTGTTGTGGGATGTCTGTTTCATCAACGGAAACTTTGC +
Preference number: 1 (lower is better)
Translates to: VITFITNIAHVAQKT*VFVVGCLFHQRKLC
Trigger: GCAAAGTTTCCGTTGATGAAACAGACATCCCACAACAAAAACCCAAGTTTTCTGTGCTACATGTGCAATATTTGTTATGAATGTTATCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR GCA 90 bp ACGGCTCGGCGAGAAGGGGCGGCGGAGACGGCAAGCGCGGCCTTCCCACCCCGCAGGAGCTCTGGTCTCTaGGCGGCGGGGCGCCCTCTC +
Preference number: 2 (lower is better)
Translates to: TARREGAAETASAAFPPRRSSGL*AAGRPL
Trigger: GAGAGGGCGCCCCGCCGCGCAGAGACCAGAGCTCCT...GCGGGGTGGGAAGGCCGCGCTTGCCGTCTCCGCCGCCCCTTCTCGCCGAGCCGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR GCA 90 bp GGTCCCCGGGAGACGGAGCTAGAGGCCGCTGCTAAGCAGCGAGGCCCGGCCCCATCCCTCGAGATGGCCTaGAGCAGGCGTGGGGCCCCC +
Preference number: 2 (lower is better)
Translates to: GPRETELEAAAKQRGPAPSLEMA*SRRGAP
Trigger: GGGGGCCCCACGCCTGCTGCAGGCCATCTCGAGGGA...TGGGGCCGGGCCTCGCTGCTTAGCAGCGGCCTCTAGCTCCGTCTCCCGGGGACC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR CCA 90 bp CGGCCCCAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCGCGGGGCTTCCTCGGTaGGGCGCGGGCCTCTCGGTT +
Preference number: 2 (lower is better)
Translates to: RPQSTEKAAGSLRRDRSCAGLPR*GAGLSV
Trigger: AACCGAGAGGCCCGCGCCCCACCGAGGAAGCCCCGC...GCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTGGGGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR CCA 90 bp TCGGCGAGAAGGGGCGGCGGAGACGGCAAGCGCGGCCTTCCCACCCCGCGGGCCGGGCCAAGGATGAGCTaGGGAAGCCAAAGGCCCTGG +
Preference number: 2 (lower is better)
Translates to: SARRGGGDGKRGLPTPRAGPRMS*GSQRPW
Trigger: CCAGGGCCTTTGGCTTCCCCAGCTCATCCTTGGCCC...GGCCCGCGGGGTGGGAAGGCCGCGCTTGCCGTCTCCGCCGCCCCTTCTCGCCGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR GCA 90 bp TCGGCGAGAAGGGGCGGCGGAGACGGCAAGCGCGGCCTTCCCACCCCGCGGGCCTGCCAATCTCGCAGATaGAGGCAGTCAGGAGCAGGG +
Preference number: 2 (lower is better)
Translates to: SARRGGGDGKRGLPTPRACQSRR*RQSGAG
Trigger: CCCTGCTCCTGACTGCCTGCATCTGCGAGATTGGCA...GGCCCGCGGGGTGGGAAGGCCGCGCTTGCCGTCTCCGCCGCCCCTTCTCGCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR TCA 90 bp GGCACTGAGGAGCTCTGGTCTCTGCGCGGCGGGGCGCCCTCTCCGAATCAGCCCAGGCGACAAGCCGACTaGGGAGAGACGCCTGCTCCC +
Preference number: 2 (lower is better)
Translates to: GTEELWSLRGGAPSPNQPRRQAD*GETPAP
Trigger: GGGAGCAGGCGTCTCTCCTCAGTCGGCTTGTCGCCT...GGGCTGATTCGGAGAGGGCGCCCCGCCGCGCAGAGACCAGAGCTCCTCAGTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR GCA 90 bp CGGCCCCAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCAGGCGAGACAGGAGCTaGCAGATGGGGACGGGGGAG +
Preference number: 2 (lower is better)
Translates to: RPQSTEKAAGSLRRDRSCRRDRS*QMGTGE
Trigger: CTCCCCCGTCCCCATCTGGCAGCTCCTGTCTCGCCT...GCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTGGGGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR CCA 90 bp GGTCCCCGGGAGACGGAGCTAGAGGCCGCTGCTAAGCAGCGAGGCCCGGCCCCATCTGGGGCCTCTCAGTaGGTCCGGCCCCTAAACCAG +
Preference number: 2 (lower is better)
Translates to: GPRETELEAAAKQRGPAPSGASQ*VRPLNQ
Trigger: CTGGTTTAGGGGCCGGACCCACTGAGAGGCCCCAGA...TGGGGCCGGGCCTCGCTGCTTAGCAGCGGCCTCTAGCTCCGTCTCCCGGGGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR CCA 90 bp GGCACTGAGGAGCTCTGGTCTCTGCGCGGCGGGGCGCCCTCTCCGAATCAGCCCCGCAGGTCAGGGCCCTaGGGCTGGAGGTACTGTACC +
Preference number: 2 (lower is better)
Translates to: GTEELWSLRGGAPSPNQPRRSGP*GWRYCT
Trigger: GGTACAGTACCTCCAGCCCCAGGGCCCTGACCTGCG...GGGCTGATTCGGAGAGGGCGCCCCGCCGCGCAGAGACCAGAGCTCCTCAGTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR GCA 90 bp CAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCAGATGAGGAGCTCTGGTCTCTaGGCGGCGGGGCGCCCTCTC +
Preference number: 2 (lower is better)
Translates to: QSTEKAAGSLRRDRSCQMRSSGL*AAGRPL
Trigger: GAGAGGGCGCCCCGCCGCGCAGAGACCAGAGCTCCT...CATCTGGCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR GCA 90 bp CTTGTCCCAGGGAGGAAACTCCGGGGAGGGGGCGCCCTCCAGCTCCACAATTTCCTCGCCTCCCCGCAGTaGCCCCAGCGGGAGAGCTCG +
Preference number: 2 (lower is better)
Translates to: LVPGRKLRGGGALQLHNFLASPQ*PQRESS
Trigger: CGAGCTCTCCCGCTGGGGGCACTGCGGGGAGGCGAG...GAAATTGTGGAGCTGGAGGGCGCCCCCTCCCCGGAGTTTCCTCCCTGGGACAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR CCA 90 bp CAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCAGATGGGCACTGAGGAGCTCTaGTCTCTGCGCGGCGGGGCG +
Preference number: 2 (lower is better)
Translates to: QSTEKAAGSLRRDRSCQMGTEEL*SLRGGA
Trigger: CGCCCCGCCGCGCAGAGACCAGAGCTCCTCAGTGCC...CATCTGGCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR GCA 90 bp GGCACTGAGGAGCTCTGGTCTCTGCGCGGCGGGGCGCCCTCTCCGAATCAGCCCCCGATGAGAAGAGGTTaGTCGCGTCTCTGCAGCCGC +
Preference number: 2 (lower is better)
Translates to: GTEELWSLRGGAPSPNQPPMRRG*SRLCSR
Trigger: GCGGCTGCAGAGACGCGAGCAACCTCTTCTCATCGG...GGGCTGATTCGGAGAGGGCGCCCCGCCGCGCAGAGACCAGAGCTCCTCAGTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR CCA 90 bp CAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCAGATGCATCACGGGCGGCTCTaGGGCCTCTCAGTGGGTCCG +
Preference number: 2 (lower is better)
Translates to: QSTEKAAGSLRRDRSCQMHHGRL*GLSVGP
Trigger: CGGACCCACTGAGAGGCCCCAGAGCCGCCCGTGATG...CATCTGGCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR TCA 90 bp GGTCCCCGGGAGACGGAGCTAGAGGCCGCTGCTAAGCAGCGAGGCCCGGCCCCATCGGTTTCTTCCTCTTaGGGAGCACCCCTCCCCTAT +
Preference number: 2 (lower is better)
Translates to: GPRETELEAAAKQRGPAPSVSSS*GAPLPY
Trigger: ATAGGGGAGGGGTGCTCCTCAAGAGGAAGAAACCGA...TGGGGCCGGGCCTCGCTGCTTAGCAGCGGCCTCTAGCTCCGTCTCCCGGGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR CCA 90 bp TGGCGAGGAGCCATGGGATACGGGGAGCAGGCGACAAGCCGACTGAGGAGAGACCAGCCCCAACAGGCGTaGCCTCCGGGCTTCAGGCAG +
Preference number: 2 (lower is better)
Translates to: WRGAMGYGEQATSRLRRDQPQQA*PPGFRQ
Trigger: CTGCCTGAAGCCCGGAGGCCACGCCTGTTGGGGCTG...GTCTCTCCTCAGTCGGCTTGTCGCCTGCTCCCCGTATCCCATGGCTCCTCGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR GCA 90 bp CGTCTCCTCCGGCGAGACGAGGCCGGGCTTAGAAAAAGGGCAGCGAAGACCCAGCTGAGGAGAGACGCCTaGTCCCCAGCGAAGGCACCG +
Preference number: 2 (lower is better)
Translates to: RLLRRDEAGLRKRAAKTQLRRDA*SPAKAP
Trigger: CGGTGCCTTCGCTGGGGAGCAGGCGTCTCTCCTCAG...CTGGGTCTTCGCTGCCCTTTTTCTAAGCCCGGCCTCGTCTCGCCGGAGGAGACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR GCA 90 bp CGGCCCCAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCACCCCCTTAGTAATGTaGCCTAGGGGAAGGGAACCC +
Preference number: 2 (lower is better)
Translates to: RPQSTEKAAGSLRRDRSCTPLVM*PRGREP
Trigger: GGGTTCCCTTCCCCTAGGGCACATTACTAAGGGGGT...GCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTGGGGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR CCA 90 bp GCCTTCAGCTGGGAGGTCAGTGAGAGCAGCTGGGGGTGCACCACATTCTGGTCTGGCACTGAGGAGCTCTaGTCTCTGCGCGGCGGGGCG +
Preference number: 2 (lower is better)
Translates to: AFSWEVSESSWGCTTFWSGTEEL*SLRGGA
Trigger: CGCCCCGCCGCGCAGAGACCAGAGCTCCTCAGTGCC...AGACCAGAATGTGGTGCACCCCCAGCTGCTCTCACTGACCTCCCAGCTGAAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR CCA 90 bp CGGCCCCAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCGTACCCAGTCCCAGATaGTGCTGGAACGAGCATGCA +
Preference number: 2 (lower is better)
Translates to: RPQSTEKAAGSLRRDRSCVPSPR*CWNEHA
Trigger: TGCATGCTCGTTCCAGCACCATCTGGGACTGGGTAC...GCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTGGGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR GCA 90 bp GGTGTCGAGGGAACGAGGCCACGACCCCCGCCTGGGCCTAAAGCACTTTCGCTCGGTTGCTCGCGTCTCTaGAGCCGCAGTGGAAGCTCA +
Preference number: 2 (lower is better)
Translates to: GVEGTRPRPPPGPKALSLGCSRL*SRSGSS
Trigger: TGAGCTTCCACTGCGGCTGCAGAGACGCGAGCAACC...GAGCGAAAGTGCTTTAGGCCCAGGCGGGGGTCGTGGCCTCGTTCCCTCGACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR GCA 90 bp GGCACTGAGGAGCTCTGGTCTCTGCGCGGCGGGGCGCCCTCTCCGAATCAGCCCGGAACGAGCATGCAGTaGCTGACCCCCTTAGTAATG +
Preference number: 2 (lower is better)
Translates to: GTEELWSLRGGAPSPNQPGTSMQ*LTPLVM
Trigger: CATTACTAAGGGGGTCAGGCACTGCATGCTCGTTCC...GGGCTGATTCGGAGAGGGCGCCCCGCCGCGCAGAGACCAGAGCTCCTCAGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR CCA 90 bp CTTGGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCGCGGGGCTTCCTCGGTaGGGCGCGGGCCTCTCGGTT +
Preference number: 2 (lower is better)
Translates to: LGLKGKEVVRSGLLSGASAGLPR*GAGLSV
Trigger: AACCGAGAGGCCCGCGCCCCACCGAGGAAGCCCCGC...GCTGGCGCCACTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR CCA 90 bp CGGCCCCAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCGCTCCAGCTCTGCCTTaGGCTCAAAGGAAAAGAGGT +
Preference number: 2 (lower is better)
Translates to: RPQSTEKAAGSLRRDRSCAPALP*AQRKRG
Trigger: ACCTCTTTTCCTTTGAGCCCAAGGCAGAGCTGGAGC...GCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTGGGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR CCA 90 bp GGCACTGAGGAGCTCTGGTCTCTGCGCGGCGGGGCGCCCTCTCCGAATCAGCCCGGGACTTGGTGTAACTaGCAGACCTCCAAACCTACC +
Preference number: 2 (lower is better)
Translates to: GTEELWSLRGGAPSPNQPGTWCN*QTSKPT
Trigger: GGTAGGTTTGGAGGTCTGCCAGTTACACCAAGTCCC...GGGCTGATTCGGAGAGGGCGCCCCGCCGCGCAGAGACCAGAGCTCCTCAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR CCA 90 bp CCCTCACTTGTCCCAGGGAGGAAACTCCGGGGAGGGGGCGCCCTCCAGCTCCACGGCCCCATAGCCGTGTaGTCACCGTCTCATTTCCTT +
Preference number: 2 (lower is better)
Translates to: PSLVPGRKLRGGGALQLHGPIAV*SPSHFL
Trigger: AAGGAAATGAGACGGTGACCACACGGCTATGGGGCC...GTGGAGCTGGAGGGCGCCCCCTCCCCGGAGTTTCCTCCCTGGGACAAGTGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR CCA 90 bp AACTGGCAGACCTCCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGGAGGAATGGGCCGCATaGACTACCTGGGGGTCCCCA +
Preference number: 2 (lower is better)
Translates to: NWQTSKPTPATPDAVWVAEEWAA*TTWGSP
Trigger: TGGGGACCCCCAGGTAGTCCATGCGGCCCATTCCTC...CGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGGAGGTCTGCCAGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR CCA 90 bp TCCCCTATCCTGGCCCCAACTTGCATAAGAGCCGATGAGAAGAGGTTGCTCGCGGGACCGCGGCGGGAGTaGGAAGGGGAGGAATGGGCC +
Preference number: 2 (lower is better)
Translates to: SPILAPTCIRADEKRLLAGPRRE*EGEEWA
Trigger: GGCCCATTCCTCCCCTTCCCACTCCCGCCGCGGTCC...CGCGAGCAACCTCTTCTCATCGGCTCTTATGCAAGTTGGGGCCAGGATAGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR CCA 90 bp TCGGCGAGAAGGGGCGGCGGAGACGGCAAGCGCGGCCTTCCCACCCCGCGGGCCGTAGCACAGAAAACTTaGGTTTTTGTTGTGGGATGT +
Preference number: 2 (lower is better)
Translates to: SARRGGGDGKRGLPTPRAVAQKT*VFVVGC
Trigger: ACATCCCACAACAAAAACCCAAGTTTTCTGTGCTAC...GGCCCGCGGGGTGGGAAGGCCGCGCTTGCCGTCTCCGCCGCCCCTTCTCGCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR TCA 90 bp TGGCAGACCTCCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCCACATCACAGGTGGCGTTaGGGAAGCGAGAGGAGCAGA +
Preference number: 2 (lower is better)
Translates to: WQTSKPTPATPDAVWVAPHHRWR*GSERSR
Trigger: TCTGCTCCTCTCGCTTCCTCAACGCCACCTGTGATG...TGGCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGGAGGTCTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR GCA 90 bp CTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGTGCCTGAGGCGAGACAGGAGCTaGCAGATGGGGACGGGGGAG +
Preference number: 2 (lower is better)
Translates to: LEVLYPVPDGAGTSMQCLRRDRS*QMGTGE
Trigger: CTCCCCCGTCCCCATCTGGCAGCTCCTGTCTCGCCT...CAGGCACTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR CCA 90 bp GTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCTCTGGGAGGTGCGTGAGATGTGAGGAATGGGCCGCATaGACTACCTGGGGGTCCCCA +
Preference number: 2 (lower is better)
Translates to: VVRSGLLSGASSGRCVRCEEWAA*TTWGSP
Trigger: TGGGGACCCCCAGGTAGTCCATGCGGCCCATTCCTC...ACATCTCACGCACCTCCCAGAGCTGGCGCCACTGAGTAATCCGGACCTCACCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR CCA 90 bp CTGGGGCTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGTCTGGGGCCTCTCAGTaGGTCCGGCCCCTAAACCAG +
Preference number: 2 (lower is better)
Translates to: LGLEVLYPVPDGAGTSMQSGASQ*VRPLNQ
Trigger: CTGGTTTAGGGGCCGGACCCACTGAGAGGCCCCAGA...CTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAGCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR CCA 90 bp CCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCCAGCTCCAGCTCGTACCCAGTCCCAGATaGTGCTGGAACGAGCATGCA +
Preference number: 2 (lower is better)
Translates to: PNLPQPHLTLSGWRQLQLVPSPR*CWNEHA
Trigger: TGCATGCTCGTTCCAGCACCATCTGGGACTGGGTAC...GAGCTGGAGCTGGCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR CCA 90 bp TTTCCGCGCCTTCTCCCAACCTTTATTGCAGCGTCTCCTCCGGCGAGACGAGGCTCAGGGCCCTGGGGCTaGAGGTACTGTACCCAGTCC +
Preference number: 2 (lower is better)
Translates to: FPRLLPTFIAASPPARRGSGPWG*RYCTQS
Trigger: GGACTGGGTACAGTACCTCCAGCCCCAGGGCCCTGA...GCCTCGTCTCGCCGGAGGAGACGCTGCAATAAAGGTTGGGAGAAGGCGCGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR CCA 90 bp CGTCTCCTCCGGCGAGACGAGGCCGGGCTTAGAAAAAGGGCAGCGAAGACCCAGCGCCATCACGCAAGTTaGAGGAGATCACCACCTGGC +
Preference number: 2 (lower is better)
Translates to: RLLRRDEAGLRKRAAKTQRHHAS*RRSPPG
Trigger: GCCAGGTGGTGATCTCCTCCAACTTGCGTGATGGCG...CTGGGTCTTCGCTGCCCTTTTTCTAAGCCCGGCCTCGTCTCGCCGGAGGAGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR CAA 90 bp CAAGGCCCCAGCTCCTCTCCTTTCCGCGCCTTCTCCCAACCTTTATaGCAGCGTCTCCTCCGGCGAGACGAGGCCGGGCTTAGAAAAAGG +
Preference number: 2 (lower is better)
Translates to: QGPSSSPFRAFSQPL*QRLLRRDEAGLRKR
Trigger: CCTTTTTCTAAGCCCGGCCTCGTCTCGCCGGAGGAGACGCTGCAATAAAGGTTGGGAGAAGGCGCGGAAAGGAGAGGAGCTGGGGCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR CAA 90 bp TCCCCTATCCTGGCCCCAACTTGCATAAGAGCCGATGAGAAGAGGTaGCTCGCGTCTCTGCAGCCGCAGTGGAAGCTCACGTCCGCTGGG +
Preference number: 2 (lower is better)
Translates to: SPILAPTCIRADEKR*LASLQPQWKLTSAG
Trigger: CCCAGCGGACGTGAGCTTCCACTGCGGCTGCAGAGACGCGAGCAACCTCTTCTCATCGGCTCTTATGCAAGTTGGGGCCAGGATAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR TCA 90 bp AAAGGGCGAAGAGGCGAGAGCAGGACGGAGGTGTCGAGGGAACGAGGCCACGACCGTCGAGGGATGCAATaGGGATGCCAATCTCGCAGA +
Preference number: 2 (lower is better)
Translates to: KGRRGESRTEVSRERGHDRRGMQ*GCQSRR
Trigger: TCTGCGAGATTGGCATCCTCATTGCATCCCTCGACG...GTCGTGGCCTCGTTCCCTCGACACCTCCGTCCTGCTCTCGCCTCTTCGCCCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR TCA 90 bp AACTGGCAGACCTCCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCGCTGGGCCTGTGGATaGTTTTCCAGAAAGGTGCCC +
Preference number: 2 (lower is better)
Translates to: NWQTSKPTPATPDAVWVARWACG*FSRKVP
Trigger: GGGCACCTTTCTGGAAAATCATCCACAGGCCCAGCG...CGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGGAGGTCTGCCAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR GCA 90 bp AACTGGCAGACCTCCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGGTCCTCAGCAGCGTCTaGACTGCACAGGCCAGATTC +
Preference number: 2 (lower is better)
Translates to: NWQTSKPTPATPDAVWVAVLSSV*TAQARF
Trigger: GAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGAC...CGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGGAGGTCTGCCAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR CCA 90 bp TGGCGAGGAGCCATGGGATACGGGGAGCAGGCGACAAGCCGACTGAGGAGAGACGGGAGAGCTCGACTATaGCGAGAAGTCTGTTGCGCT +
Preference number: 2 (lower is better)
Translates to: WRGAMGYGEQATSRLRRDGRARL*REVCCA
Trigger: AGCGCAACAGACTTCTCGCCATAGTCGAGCTCTCCC...GTCTCTCCTCAGTCGGCTTGTCGCCTGCTCCCCGTATCCCATGGCTCCTCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR CCA 90 bp GCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTCACGGAGAAGGCGGCTaGGTCCCTCAGGCGAGACAG +
Preference number: 2 (lower is better)
Translates to: AQPITSALEYSGPQKAGPHGEGG*VPQARQ
Trigger: CTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTG...AGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR CCA 90 bp TTTCCGCGCCTTCTCCCAACCTTTATTGCAGCGTCTCCTCCGGCGAGACGAGGCCTCAGACCAGGCTGGTaGAGCGGAAGGGCCAAGGAT +
Preference number: 2 (lower is better)
Translates to: FPRLLPTFIAASPPARRGLRPGW*SGRAKD
Trigger: ATCCTTGGCCCTTCCGCTCCACCAGCCTGGTCTGAG...GCCTCGTCTCGCCGGAGGAGACGCTGCAATAAAGGTTGGGAGAAGGCGCGGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR CCA 90 bp CTTGGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCCGCCTCAGACCAGGCTaGTGGAGCGGAAGGGCCAAG +
Preference number: 2 (lower is better)
Translates to: LGLKGKEVVRSGLLSGASRLRPG*WSGRAK
Trigger: CTTGGCCCTTCCGCTCCACCAGCCTGGTCTGAGGCG...GCTGGCGCCACTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR CCA 90 bp CTTGGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCTGCCATCCCTCGAGATaGCCTGCAGCAGGCGTGGGG +
Preference number: 2 (lower is better)
Translates to: LGLKGKEVVRSGLLSGASCHPSR*PAAGVG
Trigger: CCCCACGCCTGCTGCAGGCCATCTCGAGGGATGGCA...GCTGGCGCCACTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR CCA 90 bp GGTGTCGAGGGAACGAGGCCACGACCCCCGCCTGGGCCTAAAGCACTTTCGCTCCAGAGGAGACAGGACTaGGGCCCTTATTCTTCTCTG +
Preference number: 2 (lower is better)
Translates to: GVEGTRPRPPPGPKALSLQRRQD*GPYSSL
Trigger: CAGAGAAGAATAAGGGCCCCAGTCCTGTCTCCTCTG...GAGCGAAAGTGCTTTAGGCCCAGGCGGGGGTCGTGGCCTCGTTCCCTCGACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR TCA 90 bp CTTGGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCGGGCCAAACTGGCACTaGGGAGCTCTGGTCTCTGCG +
Preference number: 2 (lower is better)
Translates to: LGLKGKEVVRSGLLSGASGPNWH*GALVSA
Trigger: CGCAGAGACCAGAGCTCCTCAGTGCCAGTTTGGCCC...GCTGGCGCCACTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR TCA 90 bp CTTGTCCCAGGGAGGAAACTCCGGGGAGGGGGCGCCCTCCAGCTCCACAATTTCTTGCATAAGAGCCGATaGGAAGAGGTTGCTCGCGTC +
Preference number: 2 (lower is better)
Translates to: LVPGRKLRGGGALQLHNFLHKSR*EEVARV
Trigger: GACGCGAGCAACCTCTTCTCATCGGCTCTTATGCAA...GAAATTGTGGAGCTGGAGGGCGCCCCCTCCCCGGAGTTTCCTCCCTGGGACAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR TCA 90 bp GGTGTCGAGGGAACGAGGCCACGACCCCCGCCTGGGCCTAAAGCACTTTCGCTCCCTCGACCTCCGCAGTaGTGCGTAAATGATACAGAA +
Preference number: 2 (lower is better)
Translates to: GVEGTRPRPPPGPKALSLPRPPQ*CVNDTE
Trigger: TTCTGTATCATTTACGCATCACTGCGGAGGTCGAGG...GAGCGAAAGTGCTTTAGGCCCAGGCGGGGGTCGTGGCCTCGTTCCCTCGACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR CCA 90 bp CAGGGCCCAGGTCGGCTCTCCATTGGCCTTGCCATGGCCAAAGACCTGCAGGAAATCTCGGAAAAGGACTaGAGAGGAGGGTGGGAAGCC +
Preference number: 2 (lower is better)
Translates to: QGPGRLSIGLAMAKDLQEISEKD*RGGWEA
Trigger: GGCTTCCCACCCTCCTCTCCAGTCCTTTTCCGAGAT...TTCCTGCAGGTCTTTGGCCATGGCAAGGCCAATGGAGAGCCGACCTGGGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR CCA 90 bp CTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCTGTGGTGTTCAGAGGGACAGGAGCTGCCAGATaGGGACGGGGGAGGAACATC +
Preference number: 2 (lower is better)
Translates to: LWNIQAPRRQDLAVVFRGTGAAR*GRGRNI
Trigger: GATGTTCCTCCCCCGTCCCCATCTGGCAGCTCCTGT...CCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR CAA 90 bp CCCCATAGCCGTGTGGTCACCGTCTCATTTCCTTCCCAAGCCAGCTaGGCACAGACATCAAAGCCATGGCGAGACAGCGTGCGGTTACCC +
Preference number: 2 (lower is better)
Translates to: PHSRVVTVSFPSQAS*AQTSKPWRDSVRLP
Trigger: GGGTAACCGCACGCTGTCTCGCCATGGCTTTGATGTCTGTGCCAAGCTGGCTTGGGAAGGAAATGAGACGGTGACCACACGGCTATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR CAA 90 bp CCCTCAGAGAAGCGCTCAGGGTTCCCAGGAAACATGGAAACGTTCTaGGTGACCAGCAGGGCTAAGTGGCCAGCTGTGGTTTCCCGGACC +
Preference number: 2 (lower is better)
Translates to: PSEKRSGFPGNMETF*VTSRAKWPAVVSRT
Trigger: GGTCCGGGAAACCACAGCTGGCCACTTAGCCCTGCTGGTCACCAAGAACGTTTCCATGTTTCCTGGGAACCCTGAGCGCTTCTCTGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR CAA 90 bp CTGTCACCAGCCGTCTCTTCTGGGACGTTCAGGCGGAGCCGCGTGTaGGCTGGATTCTTTCTCCGGATTGAGCCTCGTGACTCATCTGTG +
Preference number: 2 (lower is better)
Translates to: LSPAVSSGTFRRSRV*AGFFLRIEPRDSSV
Trigger: CACAGATGAGTCACGAGGCTCAATCCGGAGAAAGAATCCAGCCAACACGCGGCTCCGCCTGAACGTCCCAGAAGAGACGGCTGGTGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR TCA 90 bp GGCCTCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACACGTCGAGGGATGCAATaGGGATGCCAATCTCGCAGA +
Preference number: 2 (lower is better)
Translates to: GLQLGVLSSVCTAQARFTRRGMQ*GCQSRR
Trigger: TCTGCGAGATTGGCATCCTCATTGCATCCCTCGACG...TGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
3UTR-3UTR TCA 90 bp TCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCTGTGGTGTTCAGAGGGAGGTGCCAGTGGGGATTaGCTTCTGGGCATCCCTCAG +
Preference number: 2 (lower is better)
Translates to: SGIFRPPEGRTWLWCSEGGASGD*LLGIPQ
Trigger: CTGAGGGATGCCCAGAAGTCAATCCCCACTGGCACC...TCCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR TCA 90 bp CAGGGCCCAGGTCGGCTCTCCATTGGCCTTGCCATGGCCAAAGACCTGCAGGAAACAGAACAACGGAGCTaGTGTAGACAGCAGAGGTGG +
Preference number: 2 (lower is better)
Translates to: QGPGRLSIGLAMAKDLQETEQRS*CRQQRW
Trigger: CCACCTCTGCTGTCTACATCAGCTCCGTTGTTCTGT...TTCCTGCAGGTCTTTGGCCATGGCAAGGCCAATGGAGAGCCGACCTGGGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR GCA 90 bp GCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGTTGCTCGCGTCTCTaGAGCCGCAGTGGAAGCTCA +
Preference number: 2 (lower is better)
Translates to: AQPITSALEYSGPQKAGPGCSRL*SRSGSS
Trigger: TGAGCTTCCACTGCGGCTGCAGAGACGCGAGCAACC...AGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR GCA 90 bp ACGCGATGTCTCCTGTACACTATGTATAGGCTCGGCCGCCCGCGCCCCACGGCTATCCTGGCCCCAACTTaGATAAGAGCCGATGAGAAG +
Preference number: 2 (lower is better)
Translates to: TRCLLYTMYRLGRPRPTAILAPT*IRADEK
Trigger: CTTCTCATCGGCTCTTATGCAAGTTGGGGCCAGGAT...AGCCGTGGGGCGCGGGCGGCCGAGCCTATACATAGTGTACAGGAGACATCGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR GCA 90 bp GCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTAGATGTCAAGCTAGGTaGGCAGGTCAGGGCCCTGGG +
Preference number: 2 (lower is better)
Translates to: AQPITSALEYSGPQKAGPRCQAR*AGQGPG
Trigger: CCCAGGGCCCTGACCTGCGCACCTAGCTTGACATCT...AGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR GCA 90 bp CAGGGCCCAGGTCGGCTCTCCATTGGCCTTGCCATGGCCAAAGACCTGCAGGAACAGCAGCGTCTGCACTaGACAGGCCAGATTCACAAA +
Preference number: 2 (lower is better)
Translates to: QGPGRLSIGLAMAKDLQEQQRLH*TGQIHK
Trigger: TTTGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTG...TTCCTGCAGGTCTTTGGCCATGGCAAGGCCAATGGAGAGCCGACCTGGGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR CCA 90 bp CTTGGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCTGGGAAGGGGAGGAATaGGCCGCATGGACTACCTGG +
Preference number: 2 (lower is better)
Translates to: LGLKGKEVVRSGLLSGASWEGEE*AAWTTW
Trigger: CCAGGTAGTCCATGCGGCCCATTCCTCCCCTTCCCA...GCTGGCGCCACTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR CCA 90 bp GCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTTGGGAAGGGGAGGAATaGGCCGCATGGACTACCTGG +
Preference number: 2 (lower is better)
Translates to: AQPITSALEYSGPQKAGPWEGEE*AAWTTW
Trigger: CCAGGTAGTCCATGCGGCCCATTCCTCCCCTTCCCA...AGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR CCA 90 bp CCCTCACTTGTCCCAGGGAGGAAACTCCGGGGAGGGGGCGCCCTCCAGCTCCACTCGCTCTCAAACTCTTaGACGTCAAGGAAAATTCAG +
Preference number: 2 (lower is better)
Translates to: PSLVPGRKLRGGGALQLHSLSNS*TSRKIQ
Trigger: CTGAATTTTCCTTGACGTCCAAGAGTTTGAGAGCGA...GTGGAGCTGGAGGGCGCCCCCTCCCCGGAGTTTCCTCCCTGGGACAAGTGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR CCA 90 bp GCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTTTTGGCGAGGAGCCATaGGATACGGGGAGCAGGCGA +
Preference number: 2 (lower is better)
Translates to: AQPITSALEYSGPQKAGPFGEEP*DTGSRR
Trigger: TCGCCTGCTCCCCGTATCCCATGGCTCCTCGCCAAA...AGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR CCA 90 bp TTTCCGCGCCTTCTCCCAACCTTTATTGCAGCGTCTCCTCCGGCGAGACGAGGCAGTCCCAGATGGTGCTaGAACGAGCATGCAGTGCCT +
Preference number: 2 (lower is better)
Translates to: FPRLLPTFIAASPPARRGSPRWC*NEHAVP
Trigger: AGGCACTGCATGCTCGTTCCAGCACCATCTGGGACT...GCCTCGTCTCGCCGGAGGAGACGCTGCAATAAAGGTTGGGAGAAGGCGCGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR CCA 90 bp CTTGGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCGTCCGGATTACTCAGTaGCGCCAGCTCTGGGAGGTG +
Preference number: 2 (lower is better)
Translates to: LGLKGKEVVRSGLLSGASVRITQ*RQLWEV
Trigger: CACCTCCCAGAGCTGGCGCCACTGAGTAATCCGGAC...GCTGGCGCCACTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR CCA 90 bp TTCTGCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACACCTGACGCTGTCTaGGTGGCGCCAGCTCCAGCT +
Preference number: 2 (lower is better)
Translates to: FCTAHHISSGIFRPPEGRTPDAV*VAPAPA
Trigger: AGCTGGAGCTGGCGCCACCCAGACAGCGTCAGGTGT...CCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGCAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR CCA 90 bp GGCACTGAGGAGCTCTGGTCTCTGCGCGGCGGGGCGCCCTCTCCGAATCAGCCCGTAGCACAGAAAACTTaGGTTTTTGTTGTGGGATGT +
Preference number: 2 (lower is better)
Translates to: GTEELWSLRGGAPSPNQPVAQKT*VFVVGC
Trigger: ACATCCCACAACAAAAACCCAAGTTTTCTGTGCTAC...GGGCTGATTCGGAGAGGGCGCCCCGCCGCGCAGAGACCAGAGCTCCTCAGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR CCA 90 bp TCTTGGTGTGTGGGGGCCCTTCCTCCAGGCGTAAGAGGGCATAGCGAGCCGCACGTAATATCGAAAGCGTaGCCTCCAGTTGGGTGTCCT +
Preference number: 2 (lower is better)
Translates to: SWCVGALPPGVRGHSEPHVISKA*PPVGCP
Trigger: AGGACACCCAACTGGAGGCCACGCTTTCGATATTAC...GTGCGGCTCGCTATGCCCTCTTACGCCTGGAGGAAGGGCCCCCACACACCAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
3UTR-3UTR CCA 90 bp ACGCGATGTCTCCTGTACACTATGTATAGGCTCGGCCGCCCGCGCCCCACGGCTATCTGTTTGAGGATCTaGGAACGCTGCTCCATCACC +
Preference number: 2 (lower is better)
Translates to: TRCLLYTMYRLGRPRPTAICLRI*ERCSIT
Trigger: GGTGATGGAGCAGCGTTCCCAGATCCTCAAACAGAT...AGCCGTGGGGCGCGGGCGGCCGAGCCTATACATAGTGTACAGGAGACATCGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR TCA 90 bp GGGAGGCGAATCCAGGAAAAGTTGGACCCTTGTCTCACCTCATCTCGGAAAAGGGGGCCAAACTGGCACTaGGGAGCTCTGGTCTCTGCG +
Preference number: 2 (lower is better)
Translates to: GRRIQEKLDPCLTSSRKRGPNWH*GALVSA
Trigger: CGCAGAGACCAGAGCTCCTCAGTGCCAGTTTGGCCC...CCTTTTCCGAGATGAGGTGAGACAAGGGTCCAACTTTTCCTGGATTCGCCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR GCA 90 bp GGTGCTGGAACGAGCATGCAGTGCCTGACCCCCTTAGTAATGTGCCCTAGGGGATCTCCCAACCTTTATTaGAGCGTCTCCTCCGGCGAG +
Preference number: 2 (lower is better)
Translates to: GAGTSMQCLTPLVMCPRGSPNLY*SVSSGE
Trigger: CTCGCCGGAGGAGACGCTGCAATAAAGGTTGGGAGA...TCCCCTAGGGCACATTACTAAGGGGGTCAGGCACTGCATGCTCGTTCCAGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR GCA 90 bp TTCTGCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGCCGATGAGAAGAGGTTaGTCGCGTCTCTGCAGCCGC +
Preference number: 2 (lower is better)
Translates to: FCTAHHISSGIFRPPEGRPMRRG*SRLCSR
Trigger: GCGGCTGCAGAGACGCGAGCAACCTCTTCTCATCGG...CCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGCAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR GCA 90 bp GGCCTCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACACACCTCGTCGAGGGATaGAATGAGGATGCCAATCTC +
Preference number: 2 (lower is better)
Translates to: GLQLGVLSSVCTAQARFTHLVEG*NEDANL
Trigger: GAGATTGGCATCCTCATTGCATCCCTCGACGAGGTG...TGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
3UTR-3UTR GCA 90 bp CCAGCTCTGCCTTGGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGATGGCCAGGCCAGAGTaGCCACCACGAGGTTGCCAT +
Preference number: 2 (lower is better)
Translates to: PALPWAQRKRGGEVRITQMARPE*PPRGCH
Trigger: ATGGCAACCTCGTGGTGGGCACTCTGGCCTGGCCAT...CTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAGGCAGAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR CCA 90 bp CTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCTGTGGTGTTCAGAGGGATCTCGGAAAAGGACTaGAGAGGAGGGTGGGAAGCC +
Preference number: 2 (lower is better)
Translates to: LWNIQAPRRQDLAVVFRGISEKD*RGGWEA
Trigger: GGCTTCCCACCCTCCTCTCCAGTCCTTTTCCGAGAT...CCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR CCA 90 bp CCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCCAGCTCCAGCTCGAATCCAGGAAAAGTTaGACCCTTGTCTCACCTCAT +
Preference number: 2 (lower is better)
Translates to: PNLPQPHLTLSGWRQLQLESRKS*TLVSPH
Trigger: ATGAGGTGAGACAAGGGTCCAACTTTTCCTGGATTC...GAGCTGGAGCTGGCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR CCA 90 bp ACTTGCATAAGAGCCGATGAGAAGAGGTTGCTCGCGTCTCTGCAGCCGCAGTGGCAGCACCAGCAGCTGTaGCCTCCAGTTCTTGGTGTG +
Preference number: 2 (lower is better)
Translates to: TCIRADEKRLLASLQPQWQHQQL*PPVLGV
Trigger: CACACCAAGAACTGGAGGCCACAGCTGCTGGTGCTG...CCACTGCGGCTGCAGAGACGCGAGCAACCTCTTCTCATCGGCTCTTATGCAAGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR CCA 90 bp CTGGGGCTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGCAGACATCAAAGCCATaGCGAGACAGCGTGCGGTTA +
Preference number: 2 (lower is better)
Translates to: LGLEVLYPVPDGAGTSMQQTSKP*RDSVRL
Trigger: TAACCGCACGCTGTCTCGCCATGGCTTTGATGTCTG...CTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR CCA 90 bp TCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCTGTGGTGTTCAGAGGGATGTAGACAGCAGAGGTaGTGGCGATGGCCAGGATGG +
Preference number: 2 (lower is better)
Translates to: SGIFRPPEGRTWLWCSEGCRQQR*WRWPGW
Trigger: CCATCCTGGCCATCGCCACCACCTCTGCTGTCTACA...TCCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR TCA 90 bp CTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCTGTGGTGTTCAGAGGGTGCCAACCAGCAGGGTaGAGTAGGAGGTCATATCAC +
Preference number: 2 (lower is better)
Translates to: LWNIQAPRRQDLAVVFRGCQPAG*SRRSYH
Trigger: GTGATATGACCTCCTACTTCACCCTGCTGGTTGGCA...CCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR TCA 90 bp CTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGTGCCTGCATGATCCCTGTGACTaGGGGGAAGTAGATGCCAAC +
Preference number: 2 (lower is better)
Translates to: LEVLYPVPDGAGTSMQCLHDPCD*GEVDAN
Trigger: GTTGGCATCTACTTCCCCTCAGTCACAGGGATCATG...CAGGCACTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR GCA 90 bp CTTGGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCGATACAGCCCCCTTCTaGACAGCCCATCACATCAGC +
Preference number: 2 (lower is better)
Translates to: LGLKGKEVVRSGLLSGASDTAPF*TAHHIS
Trigger: GCTGATGTGATGGGCTGTGCAGAAGGGGGCTGTATC...GCTGGCGCCACTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR GCA 90 bp CCAGCTCTGCCTTGGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGGCAGGAAGGGCACAATaGCATCCCTCGAGATGGCCT +
Preference number: 2 (lower is better)
Translates to: PALPWAQRKRGGEVRITQAGRAQ*HPSRWP
Trigger: AGGCCATCTCGAGGGATGGCATTGTGCCCTTCCTGC...CTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAGGCAGAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR CCA 90 bp TCTACTGAAGGATGCAGGGGGCTGGTGTCTAACACCTCCAGCTTCCTGATTGAGTTTGGCGAGGAGCCATaGGATACGGGGAGCAGGCGA +
Preference number: 2 (lower is better)
Translates to: STEGCRGLVSNTSSFLIEFGEEP*DTGSRR
Trigger: TCGCCTGCTCCCCGTATCCCATGGCTCCTCGCCAAA...CTCAATCAGGAAGCTGGAGGTGTTAGACACCAGCCCCCTGCATCCTTCAGTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR CCA 90 bp CTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCTGTGGTGTTCAGAGGGGCTCCAGCTCTGCCTTaGGCTCAAAGGAAAAGAGGT +
Preference number: 2 (lower is better)
Translates to: LWNIQAPRRQDLAVVFRGAPALP*AQRKRG
Trigger: ACCTCTTTTCCTTTGAGCCCAAGGCAGAGCTGGAGC...CCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR CCA 90 bp GCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTAAGGATGCAGGGGGCTaGTGTCTAACACCTCCAGCT +
Preference number: 2 (lower is better)
Translates to: AQPITSALEYSGPQKAGPKDAGG*CLTPPA
Trigger: AGCTGGAGGTGTTAGACACCAGCCCCCTGCATCCTT...AGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR CCA 90 bp CTTGGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCAAGGATGCAGGGGGCTaGTGTCTAACACCTCCAGCT +
Preference number: 2 (lower is better)
Translates to: LGLKGKEVVRSGLLSGASKDAGG*CLTPPA
Trigger: AGCTGGAGGTGTTAGACACCAGCCCCCTGCATCCTT...GCTGGCGCCACTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR CCA 90 bp TTTCCGCGCCTTCTCCCAACCTTTATTGCAGCGTCTCCTCCGGCGAGACGAGGCCCATCACATCAGCTCTaGAATATTCAGGCCCCCAGA +
Preference number: 2 (lower is better)
Translates to: FPRLLPTFIAASPPARRGPSHQL*NIQAPR
Trigger: TCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGG...GCCTCGTCTCGCCGGAGGAGACGCTGCAATAAAGGTTGGGAGAAGGCGCGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR CCA 90 bp CCGCAGTGGAAGCTCACGTCCGCTGGGAGGCGAATCCAGGAAAAGTTGGACCCTGTAATATCGAAAGCGTaGCCTCCAGTTGGGTGTCCT +
Preference number: 2 (lower is better)
Translates to: PQWKLTSAGRRIQEKLDPVISKA*PPVGCP
Trigger: AGGACACCCAACTGGAGGCCACGCTTTCGATATTAC...AGGGTCCAACTTTTCCTGGATTCGCCTCCCAGCGGACGTGAGCTTCCACTGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR CCA 90 bp ACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCCACAATCACGCCCTTaGTCAGGTAGGAGCTCCAGA +
Preference number: 2 (lower is better)
Translates to: TAHHISSGIFRPPEGRTWPQSRP*SGRSSR
Trigger: TCTGGAGCTCCTACCTGACCAAGGGCGTGATTGTGG...CCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR GCA 90 bp CTGTTTCATCAACGGAAACTTTGCTCTTGCCAACCAGACAATCTGGGCCCAGATCTGAGGAGAGACGCCTaGTCCCCAGCGAAGGCACCG +
Preference number: 2 (lower is better)
Translates to: LFHQRKLCSCQPDNLGPDLRRDA*SPAKAP
Trigger: CGGTGCCTTCGCTGGGGAGCAGGCGTCTCTCCTCAG...ATCTGGGCCCAGATTGTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATGAAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR GCA 90 bp CCAGCTCTGCCTTGGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGTGCCCACCACGAGGTTaGCATTCACAGCTTCGCCAA +
Preference number: 2 (lower is better)
Translates to: PALPWAQRKRGGEVRITQCPPRG*HSQLRQ
Trigger: TTGGCGAAGCTGTGAATGGCAACCTCGTGGTGGGCA...CTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAGGCAGAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR GCA 90 bp TTCTGCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGCCATGGCCAAAGACCTaGAGGAAGGGCACAATGCCA +
Preference number: 2 (lower is better)
Translates to: FCTAHHISSGIFRPPEGRPWPKT*RKGTMP
Trigger: TGGCATTGTGCCCTTCCTGCAGGTCTTTGGCCATGG...CCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGCAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR CCA 90 bp CTGTTTCATCAACGGAAACTTTGCTCTTGCCAACCAGACAATCTGGGCCCAGATCACGGAGAAGGCGGCTaGGTCCCTCAGGCGAGACAG +
Preference number: 2 (lower is better)
Translates to: LFHQRKLCSCQPDNLGPDHGEGG*VPQARQ
Trigger: CTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTG...ATCTGGGCCCAGATTGTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATGAAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR CCA 90 bp CCAGCTCTGCCTTGGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGAGTCCCAGATGGTGCTaGAACGAGCATGCAGTGCCT +
Preference number: 2 (lower is better)
Translates to: PALPWAQRKRGGEVRITQSPRWC*NEHAVP
Trigger: AGGCACTGCATGCTCGTTCCAGCACCATCTGGGACT...CTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAGGCAGAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR TCA 90 bp CTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGTGCCTGAGGAGGTCATATCACTaGAGACATAAGGGTGGTCCA +
Preference number: 2 (lower is better)
Translates to: LEVLYPVPDGAGTSMQCLRRSYH*RHKGGP
Trigger: TGGACCACCCTTATGTCTTCAGTGATATGACCTCCT...CAGGCACTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR GCA 90 bp TCTACTGAAGGATGCAGGGGGCTGGTGTCTAACACCTCCAGCTTCCTGATTGAGACCCCCTTAGTAATGTaGCCTAGGGGAAGGGAACCC +
Preference number: 2 (lower is better)
Translates to: STEGCRGLVSNTSSFLIETPLVM*PRGREP
Trigger: GGGTTCCCTTCCCCTAGGGCACATTACTAAGGGGGT...CTCAATCAGGAAGCTGGAGGTGTTAGACACCAGCCCCCTGCATCCTTCAGTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR CCA 90 bp GCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGCCAACCAGACAATCTaGGCCCAGATAGTGCAACTT +
Preference number: 2 (lower is better)
Translates to: AQPITSALEYSGPQKAGPANQTI*AQIVQL
Trigger: AAGTTGCACTATCTGGGCCCAGATTGTCTGGTTGGC...AGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR CCA 90 bp TGGGAGGCGAATCCAGGAAAAGTTGGACCCTTGTCTCACCTCATCTCGGAAAAGCCGGGTGGCAGGTCCTaGTTCTCAGGAGTAGATGGT +
Preference number: 2 (lower is better)
Translates to: WEANPGKVGPLSHLISEKPGGRS*FSGVDG
Trigger: ACCATCTACTCCTGAGAACCAGGACCTGCCACCCGG...CTTTTCCGAGATGAGGTGAGACAAGGGTCCAACTTTTCCTGGATTCGCCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR CAA 90 bp GACTGGTTCAAGTTCTCCCACTCCGGCTTCATGCTGAAGAAGTCCTaGATGCCCTCAGAGGAGACAGGACTGGGGCCCTTATTCTTCTCT +
Preference number: 2 (lower is better)
Translates to: DWFKFSHSGFMLKKS*MPSEETGLGPLFFS
Trigger: AGAGAAGAATAAGGGCCCCAGTCCTGTCTCCTCTGAGGGCATCAAGGACTTCTTCAGCATGAAGCCGGAGTGGGAGAACTTGAACCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR TCA 90 bp CTTGGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCACACAAGATCAATACTaGGGCAGGATGCGGCATACT +
Preference number: 2 (lower is better)
Translates to: LGLKGKEVVRSGLLSGASTQDQY*GRMRHT
Trigger: AGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGT...GCTGGCGCCACTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR GCA 90 bp CTGGGGCTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGTGGCGAGAAGTCTGTTaGGCTTCTAGTCACATAAAT +
Preference number: 2 (lower is better)
Translates to: LGLEVLYPVPDGAGTSMQWREVC*ASSHIN
Trigger: ATTTATGTGACTAGAAGCGCAACAGACTTCTCGCCA...CTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAGCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR GCA 90 bp TCTACTGAAGGATGCAGGGGGCTGGTGTCTAACACCTCCAGCTTCCTGATTGAGGGAACGAGCATGCAGTaGCTGACCCCCTTAGTAATG +
Preference number: 2 (lower is better)
Translates to: STEGCRGLVSNTSSFLIEGTSMQ*LTPLVM
Trigger: CATTACTAAGGGGGTCAGGCACTGCATGCTCGTTCC...CTCAATCAGGAAGCTGGAGGTGTTAGACACCAGCCCCCTGCATCCTTCAGTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR CCA 90 bp TCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGCACGGAGAAGGCGGCTaGGTCCCTCAGGCGAGACAG +
Preference number: 2 (lower is better)
Translates to: SYWHKEHKINTEAGCGILHGEGG*VPQARQ
Trigger: CTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTG...CAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR CCA 90 bp CCAGCTCTGCCTTGGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGCTTCCCAAGCCAGCTTaGCACAGACATCAAAGCCAT +
Preference number: 2 (lower is better)
Translates to: PALPWAQRKRGGEVRITQLPKPA*HRHQSH
Trigger: ATGGCTTTGATGTCTGTGCCAAGCTGGCTTGGGAAG...CTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAGGCAGAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR CAA 90 bp ATCTCTGTGACATTGTTTCGGGTGAAGTATTCATCACAGGTGGCGTaGAGGAAGCGAGAGGAGCAGAAAAGGCCCCATAGCCGTGTGGTC +
Preference number: 2 (lower is better)
Translates to: ISVTLFRVKYSSQVA*RKREEQKRPHSRVV
Trigger: GACCACACGGCTATGGGGCCTTTTCTGCTCCTCTCGCTTCCTCAACGCCACCTGTGATGAATACTTCACCCGAAACAATGTCACAGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR GCA 90 bp CCGCCTGGGCCTAAAGCACTTTCGCTCTCAAACTCTTGGACGTCAAGGAAAATTTCTCCCAACCTTTATTaGAGCGTCTCCTCCGGCGAG +
Preference number: 2 (lower is better)
Translates to: PPGPKALSLSNSWTSRKISPNLY*SVSSGE
Trigger: CTCGCCGGAGGAGACGCTGCAATAAAGGTTGGGAGA...AATTTTCCTTGACGTCCAAGAGTTTGAGAGCGAAAGTGCTTTAGGCCCAGGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR GCA 90 bp TGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACAAACATGTAGCACATCACCTCGTCGAGGGATaGAATGAGGATGCCAATCTC +
Preference number: 2 (lower is better)
Translates to: CPQQRLHCTGQIHKHVAHHLVEG*NEDANL
Trigger: GAGATTGGCATCCTCATTGCATCCCTCGACGAGGTG...ATGTGCTACATGTTTGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
3UTR-3UTR CCA 90 bp TCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGGGGCCAAGGATGAGCTaGGGAAGCCAAAGGCCCTGG +
Preference number: 2 (lower is better)
Translates to: SYWHKEHKINTEAGCGILGPRMS*GSQRPW
Trigger: CCAGGGCCTTTGGCTTCCCCAGCTCATCCTTGGCCC...CAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR CCA 90 bp TGGGAGGCGAATCCAGGAAAAGTTGGACCCTTGTCTCACCTCATCTCGGAAAAGATCTCAGAGGGGACTTaGTGTAACTGGCAGACCTCC +
Preference number: 2 (lower is better)
Translates to: WEANPGKVGPLSHLISEKISEGT*CNWQTS
Trigger: GGAGGTCTGCCAGTTACACCAAGTCCCCTCTGAGAT...CTTTTCCGAGATGAGGTGAGACAAGGGTCCAACTTTTCCTGGATTCGCCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR TCA 90 bp CTTGGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCCAGGATGCGGCATACTaGACACTTACACTGAAAATT +
Preference number: 2 (lower is better)
Translates to: LGLKGKEVVRSGLLSGASQDAAY*TLTLKI
Trigger: AATTTTCAGTGTAAGTGTTCAGTATGCCGCATCCTG...GCTGGCGCCACTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR CCA 90 bp TCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGCTCAGACCAGGCTGGTaGAGCGGAAGGGCCAAGGAT +
Preference number: 2 (lower is better)
Translates to: SYWHKEHKINTEAGCGILLRPGW*SGRAKD
Trigger: ATCCTTGGCCCTTCCGCTCCACCAGCCTGGTCTGAG...CAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR CCA 90 bp CTGTTTCATCAACGGAAACTTTGCTCTTGCCAACCAGACAATCTGGGCCCAGATGGGACTTGGTGTAACTaGCAGACCTCCAAACCTACC +
Preference number: 2 (lower is better)
Translates to: LFHQRKLCSCQPDNLGPDGTWCN*QTSKPT
Trigger: GGTAGGTTTGGAGGTCTGCCAGTTACACCAAGTCCC...ATCTGGGCCCAGATTGTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATGAAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR CCA 90 bp TCTCCTTTTCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGAGCGTGGCCTCCAGTTaGGTGTCCTCAGCAGCGTCT +
Preference number: 2 (lower is better)
Translates to: SPFHIGTKNTRSILRQDASVASS*VSSAAS
Trigger: AGACGCTGCTGAGGACACCCAACTGGAGGCCACGCT...CGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGAAAAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR CCA 90 bp TCTCCTTTTCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGGGAGAGCTCGACTATaGCGAGAAGTCTGTTGCGCT +
Preference number: 2 (lower is better)
Translates to: SPFHIGTKNTRSILRQDAGRARL*REVCCA
Trigger: AGCGCAACAGACTTCTCGCCATAGTCGAGCTCTCCC...CGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGAAAAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR CCA 90 bp AATACTCTTGATTTGGTTTGCAACCTCTCCTATTTACAAGGGTTTTCAACTTCACACGGAGAAGGCGGCTaGGTCCCTCAGGCGAGACAG +
Preference number: 2 (lower is better)
Translates to: NTLDLVCNLSYLQGFSTSHGEGG*VPQARQ
Trigger: CTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTG...TGAAGTTGAAAACCCTTGTAAATAGGAGAGGTTGCAAACCAAATCAAGAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR TCA 90 bp TCTCCTATTTACAAGGGTTTTCAACTTCATTGCATTGCCCTGCACATAGATCATCAGTGGCCATGCAGGTaGGCACACAGGTGCCGTAAA +
Preference number: 2 (lower is better)
Translates to: SPIYKGFQLHCIALHIDHQWPCR*AHRCRK
Trigger: TTTACGGCACCTGTGTGCTCACCTGCATGGCCACTG...ATGATCTATGTGCAGGGCAATGCAATGAAGTTGAAAACCCTTGTAAATAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR GCA 90 bp TGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGAACACTGAGCATGGCTACCAGTaGATAATACCAGGAGCAGAT +
Preference number: 2 (lower is better)
Translates to: WHKEHKINTEAGCGILNTEHGYQ*IIPGAD
Trigger: ATCTGCTCCTGGTATTATGCACTGGTAGCCATGCTC...AGTGTTCAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR CCA 90 bp GAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGAACACTTACACTGAAGCACCAGGGATGCCCTaGATCTCTGTGACATTGTTT +
Preference number: 2 (lower is better)
Translates to: EHKINTEAGCGILNTYTEAPGMP*ISVTLF
Trigger: AAACAATGTCACAGAGATCCAGGGCATCCCTGGTGC...TTCAGTGTAAGTGTTCAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR GCA 90 bp TCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGCATCAACGGAAACTTTaGTCTTGCCAACCAGACAAT +
Preference number: 2 (lower is better)
Translates to: SYWHKEHKINTEAGCGILHQRKL*SCQPDN
Trigger: ATTGTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATG...CAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR GCA 90 bp AATACTCTTGATTTGGTTTGCAACCTCTCCTATTTACAAGGGTTTTCAACTTCAGCTCTCCATTGGCCTTaGCATGGCCAAAGACCTGCA +
Preference number: 2 (lower is better)
Translates to: NTLDLVCNLSYLQGFSTSALHWP*HGQRPA
Trigger: TGCAGGTCTTTGGCCATGGCAAGGCCAATGGAGAGC...TGAAGTTGAAAACCCTTGTAAATAGGAGAGGTTGCAAACCAAATCAAGAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR GCA 90 bp AATACTCTTGATTTGGTTTGCAACCTCTCCTATTTACAAGGGTTTTCAACTTCAGGAACGAGCATGCAGTaGCTGACCCCCTTAGTAATG +
Preference number: 2 (lower is better)
Translates to: NTLDLVCNLSYLQGFSTSGTSMQ*LTPLVM
Trigger: CATTACTAAGGGGGTCAGGCACTGCATGCTCGTTCC...TGAAGTTGAAAACCCTTGTAAATAGGAGAGGTTGCAAACCAAATCAAGAGTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR GCA 90 bp TCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGGGTTTTCAACTTCATTaGATTGCCCTGCACATAGAT +
Preference number: 2 (lower is better)
Translates to: SYWHKEHKINTEAGCGILGFQLH*IALHID
Trigger: ATCTATGTGCAGGGCAATGCAATGAAGTTGAAAACC...CAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
3UTR-3UTR CCA 90 bp TCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGGTAGCACAGAAAACTTaGGTTTTTGTTGTGGGATGT +
Preference number: 2 (lower is better)
Translates to: SYWHKEHKINTEAGCGILVAQKT*VFVVGC
Trigger: ACATCCCACAACAAAAACCCAAGTTTTCTGTGCTAC...CAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
3UTR CAA 90 bp TGTGATAACATTCATAACAAATATTGCACATGTAGCACAGAAAACTaGGGTTTTTGTTGTGGGATGTCTGTTTCATCAACGGAAACTTTG +
Preference number: 2 (lower is better)
Translates to: CDNIHNKYCTCSTEN*GFCCGMSVSSTETL
Trigger: CAAAGTTTCCGTTGATGAAACAGACATCCCACAACAAAAACCCAAGTTTTCTGTGCTACATGTGCAATATTTGTTATGAATGTTATCACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR CCA 72 bp CGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCAGATaGGGACGGGGGAGGAACATCACGGGCGGCTCTGGG +
Preference number: 3 (lower is better)
Translates to: RLGPSGETGAAR*GRGRNITGGSG
Trigger: CCCAGAGCCGCCCGTGATGTTCCTCCCCCGTCCCCATCTGGCAGCTCCTGTCTCGCCTGAGGGACCCAGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR GCA 72 bp GAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTaGCAGATGGGGACGGGGGAGGAACATCACGGGCGG +
Preference number: 3 (lower is better)
Translates to: EKAAGSLRRDRS*QMGTGEEHHGR
Trigger: CCGCCCGTGATGTTCCTCCCCCGTCCCCATCTGGCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR TCA 72 bp GAGCCATGGGATACGGGGAGCAGGCGACAAGCCGACTaGGGAGAGACGCCTGCTCCCCAGCGAAGGCACCGG +
Preference number: 3 (lower is better)
Translates to: EPWDTGSRRQAD*GETPAPQRRHR
Trigger: CCGGTGCCTTCGCTGGGGAGCAGGCGTCTCTCCTCAGTCGGCTTGTCGCCTGCTCCCCGTATCCCATGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR CCA 72 bp CGAAGACCCAGGGGCCAAACTGGCACTGAGGAGCTCTaGTCTCTGCGCGGCGGGGCGCCCTCTCCGAATCAG +
Preference number: 3 (lower is better)
Translates to: RRPRGQTGTEEL*SLRGGAPSPNQ
Trigger: CTGATTCGGAGAGGGCGCCCCGCCGCGCAGAGACCAGAGCTCCTCAGTGCCAGTTTGGCCCCTGGGTCTTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR CAA 90 bp GGCACTGAGGAGCTCTGGTCTCTGCGCGGCGGGGCGCCCTCTCCGAATCAGCCCTTCTCCCAACCTTTATaGCAGCGTCTCCTCCGGCGA +
Preference number: 3 (lower is better)
Translates to: GTEELWSLRGGAPSPNQPFSQPL*QRLLRR
Trigger: TCGCCGGAGGAGACGCTGCAATAAAGGTTGGGAGAA...GGGCTGATTCGGAGAGGGCGCCCCGCCGCGCAGAGACCAGAGCTCCTCAGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR CAA 90 bp GGTCCCCGGGAGACGGAGCTAGAGGCCGCTGCTAAGCAGCGAGGCCCGGCCCCACCACAATTTCAGTCTTaGGCGAGGAGCCATGGGATA +
Preference number: 3 (lower is better)
Translates to: GPRETELEAAAKQRGPAPPQFQS*ARSHGI
Trigger: TATCCCATGGCTCCTCGCCAAAGACTGAAATTGTGG...TGGGGCCGGGCCTCGCTGCTTAGCAGCGGCCTCTAGCTCCGTCTCCCGGGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR CAA 90 bp TCTTGGTGTGTGGGGGCCCTTCCTCCAGGCGTAAGAGGGCATAGCGAGCCGCACAAGCGTGGCCTCCAGTaGGGTGTCCTCAGCAGCGTC +
Preference number: 3 (lower is better)
Translates to: SWCVGALPPGVRGHSEPHKRGLQ*GVLSSV
Trigger: GACGCTGCTGAGGACACCCAACTGGAGGCCACGCTT...GTGCGGCTCGCTATGCCCTCTTACGCCTGGAGGAAGGGCCCCCACACACCAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
3UTR-3UTR CAA 90 bp CTTGTCCCAGGGAGGAAACTCCGGGGAGGGGGCGCCCTCCAGCTCCACAATTTCAAGCGTGGCCTCCAGTaGGGTGTCCTCAGCAGCGTC +
Preference number: 3 (lower is better)
Translates to: LVPGRKLRGGGALQLHNFKRGLQ*GVLSSV
Trigger: GACGCTGCTGAGGACACCCAACTGGAGGCCACGCTT...GAAATTGTGGAGCTGGAGGGCGCCCCCTCCCCGGAGTTTCCTCCCTGGGACAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR TCA 72 bp CCGGATTACTCAGTGGCGCCAGCTCTGGGAGGTGCGTaGGATGTCAAGCTAGGTGCGCAGGTCAGGGCCCTG +
Preference number: 3 (lower is better)
Translates to: PDYSVAPALGGA*DVKLGAQVRAL
Trigger: CAGGGCCCTGACCTGCGCACCTAGCTTGACATCTCACGCACCTCCCAGAGCTGGCGCCACTGAGTAATCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR GCA 72 bp GGAACGAGCATGCAGTGCCTGACCCCCTTAGTAATGTaGCCTAGGGGAAGGGAACCCGGCCACCGCGCCTTC +
Preference number: 3 (lower is better)
Translates to: GTSMQCLTPLVM*PRGREPGHRAF
Trigger: GAAGGCGCGGTGGCCGGGTTCCCTTCCCCTAGGGCACATTACTAAGGGGGTCAGGCACTGCATGCTCGTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR CCA 72 bp GGAGGGGGCGCCCTCCAGCTCCACAATTTCAGTCTTTaGCGAGGAGCCATGGGATACGGGGAGCAGGCGACA +
Preference number: 3 (lower is better)
Translates to: GGGALQLHNFSL*RGAMGYGEQAT
Trigger: TGTCGCCTGCTCCCCGTATCCCATGGCTCCTCGCCAAAGACTGAAATTGTGGAGCTGGAGGGCGCCCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR CCA 72 bp GGCCCTGGGGCTGGAGGTACTGTACCCAGTCCCAGATaGTGCTGGAACGAGCATGCAGTGCCTGACCCCCTT +
Preference number: 3 (lower is better)
Translates to: GPGAGGTVPSPR*CWNEHAVPDPL
Trigger: AAGGGGGTCAGGCACTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAGCCCCAGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR CCA 72 bp AGGCAGTCAGGAGCAGGGCCCAGGTCGGCTCTCCATTaGCCTTGCCATGGCCAAAGACCTGCAGGAAGGGCA +
Preference number: 3 (lower is better)
Translates to: RQSGAGPRSALH*PCHGQRPAGRA
Trigger: TGCCCTTCCTGCAGGTCTTTGGCCATGGCAAGGCCAATGGAGAGCCGACCTGGGCCCTGCTCCTGACTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR CAA 90 bp CAGGGCCCAGGTCGGCTCTCCATTGGCCTTGCCATGGCCAAAGACCTGCAGGAAACAGCTTCGCCAAACTaGTCCCGCAGGACGACCCCC +
Preference number: 3 (lower is better)
Translates to: QGPGRLSIGLAMAKDLQETASPN*SRRTTP
Trigger: GGGGGTCGTCCTGCGGGACAAGTTTGGCGAAGCTGT...TTCCTGCAGGTCTTTGGCCATGGCAAGGCCAATGGAGAGCCGACCTGGGCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR CAA 90 bp CCCTCACTTGTCCCAGGGAGGAAACTCCGGGGAGGGGGCGCCCTCCAGCTCCACGGAAAAGTTGGACCCTaGTCTCACCTCATCTCGGAA +
Preference number: 3 (lower is better)
Translates to: PSLVPGRKLRGGGALQLHGKVGP*SHLISE
Trigger: TTCCGAGATGAGGTGAGACAAGGGTCCAACTTTTCC...GTGGAGCTGGAGGGCGCCCCCTCCCCGGAGTTTCCTCCCTGGGACAAGTGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR CAA 90 bp CCCTCACTTGTCCCAGGGAGGAAACTCCGGGGAGGGGGCGCCCTCCAGCTCCACCGAATCCAGGAAAAGTaGGACCCTTGTCTCACCTCA +
Preference number: 3 (lower is better)
Translates to: PSLVPGRKLRGGGALQLHRIQEK*DPCLTS
Trigger: TGAGGTGAGACAAGGGTCCAACTTTTCCTGGATTCG...GTGGAGCTGGAGGGCGCCCCCTCCCCGGAGTTTCCTCCCTGGGACAAGTGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR CAA 90 bp ACGCGATGTCTCCTGTACACTATGTATAGGCTCGGCCGCCCGCGCCCCACGGCTTCATCACAGGTGGCGTaGAGGAAGCGAGAGGAGCAG +
Preference number: 3 (lower is better)
Translates to: TRCLLYTMYRLGRPRPTASSQVA*RKREEQ
Trigger: CTGCTCCTCTCGCTTCCTCAACGCCACCTGTGATGA...AGCCGTGGGGCGCGGGCGGCCGAGCCTATACATAGTGTACAGGAGACATCGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR CAA 90 bp GGCACTGAGGAGCTCTGGTCTCTGCGCGGCGGGGCGCCCTCTCCGAATCAGCCCCGCTCCCGCTCATTCTaGGTTAAATGCATCTGTTTG +
Preference number: 3 (lower is better)
Translates to: GTEELWSLRGGAPSPNQPRSRSF*VKCICL
Trigger: CAAACAGATGCATTTAACCAAGAATGAGCGGGAGCG...GGGCTGATTCGGAGAGGGCGCCCCGCCGCGCAGAGACCAGAGCTCCTCAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR GCA 72 bp AGGTCCGGATTACTCAGTGGCGCCAGCTCTGGGAGGTaGGTGAGATGTCAAGCTAGGTGCGCAGGTCAGGGC +
Preference number: 3 (lower is better)
Translates to: RSGLLSGASSGR*VRCQARCAGQG
Trigger: GCCCTGACCTGCGCACCTAGCTTGACATCTCACGCACCTCCCAGAGCTGGCGCCACTGAGTAATCCGGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR GCA 72 bp TCAGGAGCAGGGCCCAGGTCGGCTCTCCATTGGCCTTaGCATGGCCAAAGACCTGCAGGAAGGGCACAATGC +
Preference number: 3 (lower is better)
Translates to: SGAGPRSALHWP*HGQRPAGRAQC
Trigger: GCATTGTGCCCTTCCTGCAGGTCTTTGGCCATGGCAAGGCCAATGGAGAGCCGACCTGGGCCCTGCTCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR GCA 72 bp GCCTTCAGCTGGGAGGTCAGTGAGAGCAGCTGGGGGTaGACCACATTCTGGTCTTGGTCCACACGCACCAGC +
Preference number: 3 (lower is better)
Translates to: AFSWEVSESSWG*TTFWSWSTRTS
Trigger: GCTGGTGCGTGTGGACCAAGACCAGAATGTGGTGCACCCCCAGCTGCTCTCACTGACCTCCCAGCTGAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR CCA 72 bp TTCCCCGCCTTCAGCTGGGAGGTCAGTGAGAGCAGCTaGGGGTGCACCACATTCTGGTCTTGGTCCACACGC +
Preference number: 3 (lower is better)
Translates to: FPAFSWEVSESS*GCTTFWSWSTR
Trigger: GCGTGTGGACCAAGACCAGAATGTGGTGCACCCCCAGCTGCTCTCACTGACCTCCCAGCTGAAGGCGGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR CAA 90 bp AGGGCCCTGGGGCTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCTTCTCCCAACCTTTATaGCAGCGTCTCCTCCGGCGA +
Preference number: 3 (lower is better)
Translates to: RALGLEVLYPVPDGAGTSFSQPL*QRLLRR
Trigger: TCGCCGGAGGAGACGCTGCAATAAAGGTTGGGAGAA...GCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAGCCCCAGGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR TCA 72 bp GCAAAACAAGCTTGGCGTCCCGGGATTTCTTCACGATaGCCTCGTTCAGCCGCACGGCCGTGTGCATGCGCC +
Preference number: 3 (lower is better)
Translates to: AKQAWRPGISSR*PRSAARPCACA
Trigger: GGCGCATGCACACGGCCGTGCGGCTGAACGAGGTCATCGTGAAGAAATCCCGGGACGCCAAGCTTGTTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR GCA 72 bp CCTGGGGCTGGAGGTACTGTACCCAGTCCCAGATGGTaGTGGAACGAGCATGCAGTGCCTGACCCCCTTAGT +
Preference number: 3 (lower is better)
Translates to: PGAGGTVPSPRW*WNEHAVPDPLS
Trigger: ACTAAGGGGGTCAGGCACTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAGCCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR CCA 72 bp CGCGTCTCTGCAGCCGCAGTGGAAGCTCACGTCCGCTaGGAGGCGAATCCAGGAAAAGTTGGACCCTTGTCT +
Preference number: 3 (lower is better)
Translates to: RVSAAAVEAHVR*EANPGKVGPLS
Trigger: AGACAAGGGTCCAACTTTTCCTGGATTCGCCTCCCAGCGGACGTGAGCTTCCACTGCGGCTGCAGAGACGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR CCA 72 bp GACGCTGTCTGGGTGGCGCCAGCTCCAGCTCTGCCTTaGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATT +
Preference number: 3 (lower is better)
Translates to: DAVWVAPAPALP*AQRKRGGEVRI
Trigger: AATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAGGCAGAGCTGGAGCTGGCGCCACCCAGACAGCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR CAA 90 bp GGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCTCTTGTGGCCTCCAGTTCTaGGTGTGTGGGGGCCCTTCC +
Preference number: 3 (lower is better)
Translates to: GLKGKEVVRSGLLSGASSCGLQF*VCGGPS
Trigger: GGAAGGGCCCCCACACACCAAGAACTGGAGGCCACA...AGAGCTGGCGCCACTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR TCA 72 bp CTCCCCTATCCTGGCCCCAACTTGCATAAGAGCCGATaGGAAGAGGTTGCTCGCGTCTCTGCAGCCGCAGTG +
Preference number: 3 (lower is better)
Translates to: LPYPGPNLHKSR*EEVARVSAAAV
Trigger: CACTGCGGCTGCAGAGACGCGAGCAACCTCTTCTCATCGGCTCTTATGCAAGTTGGGGCCAGGATAGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR CCA 72 bp GTTGGACCCTTGTCTCACCTCATCTCGGAAAAGGACTaGAGAGGAGGGTGGGAAGCCAAGGGCGCGCGGAAA +
Preference number: 3 (lower is better)
Translates to: VGPLSHLISEKD*RGGWEAKGARK
Trigger: TTTCCGCGCGCCCTTGGCTTCCCACCCTCCTCTCCAGTCCTTTTCCGAGATGAGGTGAGACAAGGGTCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR CCA 72 bp GGGTCCAGTGGTAATATCGAAAGCGTGGCCTCCAGTTaGGTGTCCTCAGCAGCGTCTGCACTGCACAGGCCA +
Preference number: 3 (lower is better)
Translates to: GSSGNIESVASS*VSSAASALHRP
Trigger: TGGCCTGTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGAGGCCACGCTTTCGATATTACCACTGGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
3UTR CCA 72 bp CCGTCTCTTCTGGGACGTTCAGGCGGAGCCGCGTGTTaGCTGGATTCTTTCTCCGGATTGAGCCTCGTGACT +
Preference number: 3 (lower is better)
Translates to: PSLLGRSGGAAC*LDSFSGLSLVT
Trigger: AGTCACGAGGCTCAATCCGGAGAAAGAATCCAGCCAACACGCGGCTCCGCCTGAACGTCCCAGAAGAGACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR CCA 72 bp CTCTGGCTTCTCTTCACTGTCACCAGCCGTCTCTTCTaGGACGTTCAGGCGGAGCCGCGTGTTGGCTGGATT +
Preference number: 3 (lower is better)
Translates to: LWLLFTVTSRLF*DVQAEPRVGWI
Trigger: AATCCAGCCAACACGCGGCTCCGCCTGAACGTCCCAGAAGAGACGGCTGGTGACAGTGAAGAGAAGCCAGAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR CAA 90 bp CTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGTGCCTGTGGTGCCAGTGGGGATaGACTTCTGGGCATCCCTCA +
Preference number: 3 (lower is better)
Translates to: LEVLYPVPDGAGTSMQCLWCQWG*TSGHPS
Trigger: TGAGGGATGCCCAGAAGTCAATCCCCACTGGCACCA...CAGGCACTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR CAA 90 bp GCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTTGCATGCGCCGCACGTaGGACTGGTTCAAGTTCTCC +
Preference number: 3 (lower is better)
Translates to: AQPITSALEYSGPQKAGPCMRRT*DWFKFS
Trigger: GGAGAACTTGAACCAGTCCAACGTGCGGCGCATGCA...AGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR TCA 72 bp TCCAGCTCTGCCTTGGGCTCAAAGGAAAAGAGGTGGTaGGGTCCGGATTACTCAGTGGCGCCAGCTCTGGGA +
Preference number: 3 (lower is better)
Translates to: SSSALGSKEKRW*GPDYSVAPALG
Trigger: TCCCAGAGCTGGCGCCACTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAGGCAGAGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR TCA 72 bp CGCCTGATAGACTCTTCTGCCCGCTGGGCCTGTGGATaGTTTTCCAGAAAGGTGCCCTCAAGGACAGAGCCC +
Preference number: 3 (lower is better)
Translates to: RLIDSSARWACG*FSRKVPSRTEP
Trigger: GGGCTCTGTCCTTGAGGGCACCTTTCTGGAAAATCATCCACAGGCCCAGCGGGCAGAAGAGTCTATCAGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR TCA 72 bp CGCCGCGGACCAGCATCACCCGGTCCAGGTGCTCTGTaGGGACCTCGAGAAACTCCATGTAGTTTTCATCAC +
Preference number: 3 (lower is better)
Translates to: RRGPASPGPGAL*GPRETPCSFHH
Trigger: GTGATGAAAACTACATGGAGTTTCTCGAGGTCCTCACAGAGCACCTGGACCGGGTGATGCTGGTCCGCGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR GCA 72 bp TACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGTaGCTGACCCCCTTAGTAATGTGCCCTAGGGGAAGG +
Preference number: 3 (lower is better)
Translates to: YPVPDGAGTSMQ*LTPLVMCPRGR
Trigger: CCTTCCCCTAGGGCACATTACTAAGGGGGTCAGGCACTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR CCA 72 bp CCTCCCCGCAGTGCCCCCAGCGGGAGAGCTCGACTATaGCGAGAAGTCTGTTGCGCTTCTAGTCACATAAAT +
Preference number: 3 (lower is better)
Translates to: PPRSAPSGRARL*REVCCASSHIN
Trigger: ATTTATGTGACTAGAAGCGCAACAGACTTCTCGCCATAGTCGAGCTCTCCCGCTGGGGGCACTGCGGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR CCA 72 bp GGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCTGTaGTGTTCAGAGGGAGGTCTACTGAAGGATGCAGGG +
Preference number: 3 (lower is better)
Translates to: GIFRPPEGRTWL*CSEGGLLKDAG
Trigger: CCCTGCATCCTTCAGTAGACCTCCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGGGGGCCTGAATATTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR CCA 72 bp TACAGCCCCCTTCTGCACAGCCCATCACATCAGCTCTaGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCT +
Preference number: 3 (lower is better)
Translates to: YSPLLHSPSHQL*NIQAPRRQDLA
Trigger: AGCCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGCAGAAGGGGGCTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR CCA 72 bp CAGGAAGGAGAGGGTCCAGTGGTAATATCGAAAGCGTaGCCTCCAGTTGGGTGTCCTCAGCAGCGTCTGCAC +
Preference number: 3 (lower is better)
Translates to: QEGEGPVVISKA*PPVGCPQQRLH
Trigger: GTGCAGACGCTGCTGAGGACACCCAACTGGAGGCCACGCTTTCGATATTACCACTGGACCCTCTCCTTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
3UTR CCA 72 bp GGAAGCGAGAGGAGCAGAAAAGGCCCCATAGCCGTGTaGTCACCGTCTCATTTCCTTCCCAAGCCAGCTTGG +
Preference number: 3 (lower is better)
Translates to: GSERSRKGPIAV*SPSHFLPKPAW
Trigger: CCAAGCTGGCTTGGGAAGGAAATGAGACGGTGACCACACGGCTATGGGGCCTTTTCTGCTCCTCTCGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR CAA 90 bp GGTGTCGAGGGAACGAGGCCACGACCCCCGCCTGGGCCTAAAGCACTTTCGCTCTTCGCTCTCAAACTCTaGGACGTCAAGGAAAATTCA +
Preference number: 3 (lower is better)
Translates to: GVEGTRPRPPPGPKALSLFALKL*DVKENS
Trigger: TGAATTTTCCTTGACGTCCAAGAGTTTGAGAGCGAA...GAGCGAAAGTGCTTTAGGCCCAGGCGGGGGTCGTGGCCTCGTTCCCTCGACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR CAA 90 bp TTCTGCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGGGAGGCCCAGGCATGTaGAGCAAAACAAGCTTGGCG +
Preference number: 3 (lower is better)
Translates to: FCTAHHISSGIFRPPEGRGGPGM*SKTSLA
Trigger: CGCCAAGCTTGTTTTGCTCAACATGCCTGGGCCTCC...CCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGCAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR GCA 72 bp CTCAGAGGAGACAGGACTGGGGCCCTTATTCTTCTCTaGCACCGACTTGTCCTTGGTCCAGGTGAGATGCAC +
Preference number: 3 (lower is better)
Translates to: LRGDRTGALILL*HRLVLGPGEMH
Trigger: GTGCATCTCACCTGGACCAAGGACAAGTCGGTGGCAGAGAAGAATAAGGGCCCCAGTCCTGTCTCCTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR CCA 72 bp CAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGTaGCGCCAGCTCTGGGAGGTGCGTGAGATGTCAAGC +
Preference number: 3 (lower is better)
Translates to: QRKRGGEVRITQ*RQLWEVREMSS
Trigger: GCTTGACATCTCACGCACCTCCCAGAGCTGGCGCCACTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR CCA 72 bp GTGTGGTCACCGTCTCATTTCCTTCCCAAGCCAGCTTaGCACAGACATCAAAGCCATGGCGAGACAGCGTGC +
Preference number: 3 (lower is better)
Translates to: VWSPSHFLPKPA*HRHQSHGETAC
Trigger: GCACGCTGTCTCGCCATGGCTTTGATGTCTGTGCCAAGCTGGCTTGGGAAGGAAATGAGACGGTGACCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR CCA 72 bp CAGGCGCCTGATAGACTCTTCTGCCCGCTGGGCCTGTaGATGATTTTCCAGAAAGGTGCCCTCAAGGACAGA +
Preference number: 3 (lower is better)
Translates to: QAPDRLFCPLGL*MIFQKGALKDR
Trigger: TCTGTCCTTGAGGGCACCTTTCTGGAAAATCATCCACAGGCCCAGCGGGCAGAAGAGTCTATCAGGCGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR CCA 72 bp CCGCCTGGGCCTAAAGCACTTTCGCTCTCAAACTCTTaGACGTCAAGGAAAATTCAGCTTCCCGAGGCCTCG +
Preference number: 3 (lower is better)
Translates to: PPGPKALSLSNS*TSRKIQLPEAS
Trigger: CGAGGCCTCGGGAAGCTGAATTTTCCTTGACGTCCAAGAGTTTGAGAGCGAAAGTGCTTTAGGCCCAGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR CCA 72 bp AGCTCACGTCCGCTGGGAGGCGAATCCAGGAAAAGTTaGACCCTTGTCTCACCTCATCTCGGAAAAGGACTG +
Preference number: 3 (lower is better)
Translates to: SSRPLGGESRKS*TLVSPHLGKGL
Trigger: CAGTCCTTTTCCGAGATGAGGTGAGACAAGGGTCCAACTTTTCCTGGATTCGCCTCCCAGCGGACGTGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR CCA 72 bp AGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTaGCTGTGGTGTTCAGAGGGAGGTCTACTGAAGGAT +
Preference number: 3 (lower is better)
Translates to: SSGIFRPPEGRT*LWCSEGGLLKD
Trigger: ATCCTTCAGTAGACCTCCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR CAA 90 bp GCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGATTCTTTCTCCGGATaGAGCCTCGTGACTCATCTG +
Preference number: 3 (lower is better)
Translates to: AQPITSALEYSGPQKAGPDSFSG*SLVTHL
Trigger: CAGATGAGTCACGAGGCTCAATCCGGAGAAAGAATC...AGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR CAA 90 bp TTCTGCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGCGAATCCAGGAAAAGTaGGACCCTTGTCTCACCTCA +
Preference number: 3 (lower is better)
Translates to: FCTAHHISSGIFRPPEGRRIQEK*DPCLTS
Trigger: TGAGGTGAGACAAGGGTCCAACTTTTCCTGGATTCG...CCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGCAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR CAA 90 bp TTCTGCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGCCACAATTTCAGTCTTaGGCGAGGAGCCATGGGATA +
Preference number: 3 (lower is better)
Translates to: FCTAHHISSGIFRPPEGRPQFQS*ARSHGI
Trigger: TATCCCATGGCTCCTCGCCAAAGACTGAAATTGTGG...CCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGCAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR CAA 90 bp GAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGAACACTTACACTGAACAGGTCGGCTCTCCATaGGCCTTGCCATGGCCAAAG +
Preference number: 3 (lower is better)
Translates to: EHKINTEAGCGILNTYTEQVGSP*ALPWPK
Trigger: CTTTGGCCATGGCAAGGCCAATGGAGAGCCGACCTG...TTCAGTGTAAGTGTTCAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR GCA 72 bp CCCAGCGGGAGAGCTCGACTATGGCGAGAAGTCTGTTaGGCTTCTAGTCACATAAATATGGGGACGTTAAAA +
Preference number: 3 (lower is better)
Translates to: PSGRARLWREVC*ASSHINMGTLK
Trigger: TTTTAACGTCCCCATATTTATGTGACTAGAAGCGCAACAGACTTCTCGCCATAGTCGAGCTCTCCCGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR-3UTR CAA 90 bp TCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGGGAAAAGTTGGACCCTaGTCTCACCTCATCTCGGAA +
Preference number: 3 (lower is better)
Translates to: SYWHKEHKINTEAGCGILGKVGP*SHLISE
Trigger: TTCCGAGATGAGGTGAGACAAGGGTCCAACTTTTCC...CAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
3UTR GCA 72 bp TTTGGTTCCCTAATTGATGTTGATACAGCCCCCTTCTaGACAGCCCATCACATCAGCTCTGGAATATTCAGG +
Preference number: 3 (lower is better)
Translates to: FGSLIDVDTAPF*TAHHISSGIFR
Trigger: CCTGAATATTCCAGAGCTGATGTGATGGGCTGTGCAGAAGGGGGCTGTATCAACATCAATTAGGGAACCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR GCA 72 bp TTTGTTGTGGGATGTCTGTTTCATCAACGGAAACTTTaGTCTTGCCAACCAGACAATCTGGGCCCAGATAGT +
Preference number: 3 (lower is better)
Translates to: FVVGCLFHQRKL*SCQPDNLGPDS
Trigger: ACTATCTGGGCCCAGATTGTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATGAAACAGACATCCCACAACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR-3UTR CAA 90 bp AATACTCTTGATTTGGTTTGCAACCTCTCCTATTTACAAGGGTTTTCAACTTCACCTTCCCAAGCCAGCTaGGCACAGACATCAAAGCCA +
Preference number: 3 (lower is better)
Translates to: NTLDLVCNLSYLQGFSTSPSQAS*AQTSKP
Trigger: TGGCTTTGATGTCTGTGCCAAGCTGGCTTGGGAAGG...TGAAGTTGAAAACCCTTGTAAATAGGAGAGGTTGCAAACCAAATCAAGAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR-3UTR CAA 90 bp TCTCCTTTTCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGTGGATCTCTGTGACATaGTTTCGGGTGAAGTATTCA +
Preference number: 3 (lower is better)
Translates to: SPFHIGTKNTRSILRQDAWISVT*FRVKYS
Trigger: TGAATACTTCACCCGAAACAATGTCACAGAGATCCA...CGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGAAAAGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR CCA 72 bp TTCATAACAAATATTGCACATGTAGCACAGAAAACTTaGGTTTTTGTTGTGGGATGTCTGTTTCATCAACGG +
Preference number: 3 (lower is better)
Translates to: FITNIAHVAQKT*VFVVGCLFHQR
Trigger: CCGTTGATGAAACAGACATCCCACAACAAAAACCCAAGTTTTCTGTGCTACATGTGCAATATTTGTTATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp TCGGCGAGAAGGGGCGGCGGAGACGGCAAGCGCGGCCTTCCCACCCCGCGGGCCAGGAGCTCTGGTCTCTaGGCGGCGGGGCGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: SARRGGGDGKRGLPTPRARSSGL*AAGRPL
Trigger: GAGAGGGCGCCCCGCCGCGCAGAGACCAGAGCTCCT...GGCCCGCGGGGTGGGAAGGCCGCGCTTGCCGTCTCCGCCGCCCCTTCTCGCCGA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp ACGGCTCGGCGAGAAGGGGCGGCGGAGACGGCAAGCGCGGCCTTCCCACCCCGCTCCCTCGAGATGGCCTaGAGCAGGCGTGGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: TARREGAAETASAAFPPRSLEMA*SRRGAP
Trigger: GGGGGCCCCACGCCTGCTGCAGGCCATCTCGAGGGA...GCGGGGTGGGAAGGCCGCGCTTGCCGTCTCCGCCGCCCCTTCTCGCCGAGCCGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp GGTCCCCGGGAGACGGAGCTAGAGGCCGCTGCTAAGCAGCGAGGCCCGGCCCCACACGGAGGAAGAAGCTaGAGTGCCCGCCCGCCCGGC +
Preference number: 4 (lower is better)
Translates to: GPRETELEAAAKQRGPAPHGGRS*SARPPG
Trigger: GCCGGGCGGGCGGGCACTGCAGCTTCTTCCTCCGTG...TGGGGCCGGGCCTCGCTGCTTAGCAGCGGCCTCTAGCTCCGTCTCCCGGGGACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp CGGCCCCAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCGGCACTGAGGAGCTCTaGTCTCTGCGCGGCGGGGCG +
Preference number: 4 (lower is better)
Translates to: RPQSTEKAAGSLRRDRSCGTEEL*SLRGGA
Trigger: CGCCCCGCCGCGCAGAGACCAGAGCTCCTCAGTGCC...GCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTGGGGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp TCGGCGAGAAGGGGCGGCGGAGACGGCAAGCGCGGCCTTCCCACCCCGCGGGCCCTCAGACCAGGCTGGTaGAGCGGAAGGGCCAAGGAT +
Preference number: 4 (lower is better)
Translates to: SARRGGGDGKRGLPTPRALRPGW*SGRAKD
Trigger: ATCCTTGGCCCTTCCGCTCCACCAGCCTGGTCTGAG...GGCCCGCGGGGTGGGAAGGCCGCGCTTGCCGTCTCCGCCGCCCCTTCTCGCCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp GGCCCCAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCAGGAAGAAGCTGCAGTaGCCGCCCGCCCGGCGCACA +
Preference number: 4 (lower is better)
Translates to: GPRARRRRLGPSGETGAARKKLQ*PPARRT
Trigger: TGTGCGCCGGGCGGGCGGGCACTGCAGCTTCTTCCT...GGCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTGGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp ACGGCTCGGCGAGAAGGGGCGGCGGAGACGGCAAGCGCGGCCTTCCCACCCCGCCAGCACCAGCAGCTGTaGCCTCCAGTTCTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: TARREGAAETASAAFPPRQHQQL*PPVLGV
Trigger: CACACCAAGAACTGGAGGCCACAGCTGCTGGTGCTG...GCGGGGTGGGAAGGCCGCGCTTGCCGTCTCCGCCGCCCCTTCTCGCCGAGCCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CGGCCCCAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCGCAGGTCAGGGCCCTaGGGCTGGAGGTACTGTACC +
Preference number: 4 (lower is better)
Translates to: RPQSTEKAAGSLRRDRSCRRSGP*GWRYCT
Trigger: GGTACAGTACCTCCAGCCCCAGGGCCCTGACCTGCG...GCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTGGGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp TCGGCGAGAAGGGGCGGCGGAGACGGCAAGCGCGGCCTTCCCACCCCGCGGGCCCAGCAGCGTCTGCACTaGACAGGCCAGATTCACAAA +
Preference number: 4 (lower is better)
Translates to: SARRGGGDGKRGLPTPRAQQRLH*TGQIHK
Trigger: TTTGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTG...GGCCCGCGGGGTGGGAAGGCCGCGCTTGCCGTCTCCGCCGCCCCTTCTCGCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp ACGGCTCGGCGAGAAGGGGCGGCGGAGACGGCAAGCGCGGCCTTCCCACCCCGCACCCCCTTAGTAATGTaGCCTAGGGGAAGGGAACCC +
Preference number: 4 (lower is better)
Translates to: TARREGAAETASAAFPPRTPLVM*PRGREP
Trigger: GGGTTCCCTTCCCCTAGGGCACATTACTAAGGGGGT...GCGGGGTGGGAAGGCCGCGCTTGCCGTCTCCGCCGCCCCTTCTCGCCGAGCCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CAAACTGGCACTGAGGAGCTCTGGTCTCTGCGCGGCGGGGCGCCCTCTCCGAATGGACCGCGGCGGGAGTaGGAAGGGGAGGAATGGGCC +
Preference number: 4 (lower is better)
Translates to: QTGTEELWSLRGGAPSPNGPRRE*EGEEWA
Trigger: GGCCCATTCCTCCCCTTCCCACTCCCGCCGCGGTCC...ATTCGGAGAGGGCGCCCCGCCGCGCAGAGACCAGAGCTCCTCAGTGCCAGTTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CGGCCCCAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCTCTGGGGCCTCTCAGTaGGTCCGGCCCCTAAACCAG +
Preference number: 4 (lower is better)
Translates to: RPQSTEKAAGSLRRDRSCSGASQ*VRPLNQ
Trigger: CTGGTTTAGGGGCCGGACCCACTGAGAGGCCCCAGA...GCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTGGGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp GGCCCCAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCTCAGGGCCCTGGGGCTaGAGGTACTGTACCCAGTCC +
Preference number: 4 (lower is better)
Translates to: GPRARRRRLGPSGETGAASGPWG*RYCTQS
Trigger: GGACTGGGTACAGTACCTCCAGCCCCAGGGCCCTGA...GGCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTGGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp CCCTCACTTGTCCCAGGGAGGAAACTCCGGGGAGGGGGCGCCCTCCAGCTCCACCGCAGGTCAGGGCCCTaGGGCTGGAGGTACTGTACC +
Preference number: 4 (lower is better)
Translates to: PSLVPGRKLRGGGALQLHRRSGP*GWRYCT
Trigger: GGTACAGTACCTCCAGCCCCAGGGCCCTGACCTGCG...GTGGAGCTGGAGGGCGCCCCCTCCCCGGAGTTTCCTCCCTGGGACAAGTGAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp GCGGCGGGGCGCCCTCTCCGAATCAGCCCCAACAGGCGTGGCCTCCGGGCTTCACAGTGGCCATGCAGGTaGGCACACAGGTGCCGTAAA +
Preference number: 4 (lower is better)
Translates to: AAGRPLRISPNRRGLRASQWPCR*AHRCRK
Trigger: TTTACGGCACCTGTGTGCTCACCTGCATGGCCACTG...TGAAGCCCGGAGGCCACGCCTGTTGGGGCTGATTCGGAGAGGGCGCCCCGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp GCGGCGGGGCGCCCTCTCCGAATCAGCCCCAACAGGCGTGGCCTCCGGGCTTCAGGTCCAGGTGCTCTGTaGGGACCTCGAGAAACTCCA +
Preference number: 4 (lower is better)
Translates to: AAGRPLRISPNRRGLRASGPGAL*GPRETP
Trigger: TGGAGTTTCTCGAGGTCCTCACAGAGCACCTGGACC...TGAAGCCCGGAGGCCACGCCTGTTGGGGCTGATTCGGAGAGGGCGCCCCGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp GGCCCCAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCGCTCTGGGAGGTGCGTaGGATGTCAAGCTAGGTGCG +
Preference number: 4 (lower is better)
Translates to: GPRARRRRLGPSGETGAAALGGA*DVKLGA
Trigger: CGCACCTAGCTTGACATCTCACGCACCTCCCAGAGC...GGCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp GGAGGCCAGTGGAGAGGATGTGGTCGTGGCCATGTGAGGCTTGGAGCAGGGCGAGAGGTGGCGGGGGTCTaGGACCGAATGCCGGCGGGA +
Preference number: 4 (lower is better)
Translates to: GGQWRGCGRGHVRLGAGREVAGV*DRMPAG
Trigger: TCCCGCCGGCATTCGGTCGCAGACCCCCGCCACCTC...TCGCCCTGCTCCAAGCCTCACATGGCCACGACCACATCCTCTCCACTGGCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626701.1
ENST00000628272.1
CDS-3UTR CCA 90 bp GGTCCCCGGGAGACGGAGCTAGAGGCCGCTGCTAAGCAGCGAGGCCCGGCCCCAGTGGGGATTGACTTCTaGGCATCCCTCAGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: GPRETELEAAAKQRGPAPVGIDF*ASLRSP
Trigger: TGGGGACCTGAGGGATGCCCAGAAGTCAATCCCCAC...TGGGGCCGGGCCTCGCTGCTTAGCAGCGGCCTCTAGCTCCGTCTCCCGGGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp TCTTGGTGTGTGGGGGCCCTTCCTCCAGGCGTAAGAGGGCATAGCGAGCCGCACGGACCGCGGCGGGAGTaGGAAGGGGAGGAATGGGCC +
Preference number: 4 (lower is better)
Translates to: SWCVGALPPGVRGHSEPHGPRRE*EGEEWA
Trigger: GGCCCATTCCTCCCCTTCCCACTCCCGCCGCGGTCC...GTGCGGCTCGCTATGCCCTCTTACGCCTGGAGGAAGGGCCCCCACACACCAAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR TCA 90 bp GGCCCCAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCCGCTGGGCCTGTGGATaGTTTTCCAGAAAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: GPRARRRRLGPSGETGAARWACG*FSRKVP
Trigger: GGGCACCTTTCTGGAAAATCATCCACAGGCCCAGCG...GGCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTGGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp GGCCCCAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCGGGATTTCTTCACGATaGCCTCGTTCAGCCGCACGG +
Preference number: 4 (lower is better)
Translates to: GPRARRRRLGPSGETGAAGISSR*PRSAAR
Trigger: CCGTGCGGCTGAACGAGGTCATCGTGAAGAAATCCC...GGCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTGGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp ACGCGATGTCTCCTGTACACTATGTATAGGCTCGGCCGCCCGCGCCCCACGGCTTACCCCAGCCACACCTaGCGCTGTCTGGGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: TRCLLYTMYRLGRPRPTAYPSHT*RCLGGA
Trigger: GGCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTA...AGCCGTGGGGCGCGGGCGGCCGAGCCTATACATAGTGTACAGGAGACATCGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp TGGCAGACCTCCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCCAAGCCGCACGGCCGTGTaGATGCGCCGCACGTTGGAC +
Preference number: 4 (lower is better)
Translates to: WQTSKPTPATPDAVWVAPSRTAV*MRRTLD
Trigger: GTCCAACGTGCGGCGCATGCACACGGCCGTGCGGCT...TGGCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGGAGGTCTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp CAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCAGATGCTGAGGAGAGACGCCTaGTCCCCAGCGAAGGCACCG +
Preference number: 4 (lower is better)
Translates to: QSTEKAAGSLRRDRSCQMLRRDA*SPAKAP
Trigger: CGGTGCCTTCGCTGGGGAGCAGGCGTCTCTCCTCAG...CATCTGGCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp AGCAGACAGGCGCTAAGGACAAAGCGCGTGCGACTCCAGCCCTCCCTCAGGCCCGGTTGTTTAGCATGGTaGCGGCGCGGCCCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SRQALRTKRVRLQPSLRPGCLAW*RRGPWS
Trigger: GGACCAGGGGCCGCGCCGCCACCATGCTAAACAACC...GGGCCTGAGGGAGGGCTGGAGTCGCACGCGCTTTGTCCTTAGCGCCTGTCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp CAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCAGATGGGTTGTTTAGCATGGTaGCGGCGCGGCCCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: QSTEKAAGSLRRDRSCQMGCLAW*RRGPWS
Trigger: GGACCAGGGGCCGCGCCGCCACCATGCTAAACAACC...CATCTGGCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp CGGCCCCAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCTGTAGACAGCAGAGGTaGTGGCGATGGCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: RPQSTEKAAGSLRRDRSCCRQQR*WRWPGW
Trigger: CCATCCTGGCCATCGCCACCACCTCTGCTGTCTACA...GCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTGGGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp ACGGCTCGGCGAGAAGGGGCGGCGGAGACGGCAAGCGCGGCCTTCCCACCCCGCGTAATATCGAAAGCGTaGCCTCCAGTTGGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: TARREGAAETASAAFPPRVISKA*PPVGCP
Trigger: AGGACACCCAACTGGAGGCCACGCTTTCGATATTAC...GCGGGGTGGGAAGGCCGCGCTTGCCGTCTCCGCCGCCCCTTCTCGCCGAGCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp ACGGCTCGGCGAGAAGGGGCGGCGGAGACGGCAAGCGCGGCCTTCCCACCCCGCATCTGTTTGAGGATCTaGGAACGCTGCTCCATCACC +
Preference number: 4 (lower is better)
Translates to: TARREGAAETASAAFPPRICLRI*ERCSIT
Trigger: GGTGATGGAGCAGCGTTCCCAGATCCTCAAACAGAT...GCGGGGTGGGAAGGCCGCGCTTGCCGTCTCCGCCGCCCCTTCTCGCCGAGCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CGGCCCCAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCCGGGTGGCAGGTCCTaGTTCTCAGGAGTAGATGGT +
Preference number: 4 (lower is better)
Translates to: RPQSTEKAAGSLRRDRSCPGGRS*FSGVDG
Trigger: ACCATCTACTCCTGAGAACCAGGACCTGCCACCCGG...GCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTGGGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CGTCTCCTCCGGCGAGACGAGGCCGGGCTTAGAAAAAGGGCAGCGAAGACCCAGCAGCCCCAACAGGCGTaGCCTCCGGGCTTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: RLLRRDEAGLRKRAAKTQQPQQA*PPGFRQ
Trigger: CTGCCTGAAGCCCGGAGGCCACGCCTGTTGGGGCTG...CTGGGTCTTCGCTGCCCTTTTTCTAAGCCCGGCCTCGTCTCGCCGGAGGAGACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp GCGGCGGGGCGCCCTCTCCGAATCAGCCCCAACAGGCGTGGCCTCCGGGCTTCAGAAGCTCACGTCCGCTaGGAGGCGAATCCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: AAGRPLRISPNRRGLRASEAHVR*EANPGK
Trigger: TTTTCCTGGATTCGCCTCCCAGCGGACGTGAGCTTC...TGAAGCCCGGAGGCCACGCCTGTTGGGGCTGATTCGGAGAGGGCGCCCCGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CTGGGGCTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGGCGGGGCTTCCTCGGTaGGGCGCGGGCCTCTCGGTT +
Preference number: 4 (lower is better)
Translates to: LGLEVLYPVPDGAGTSMQAGLPR*GAGLSV
Trigger: AACCGAGAGGCCCGCGCCCCACCGAGGAAGCCCCGC...CTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAGCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp GTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCTCTGGGAGGTGCGTGAGATGTGCGGGGCTTCCTCGGTaGGGCGCGGGCCTCTCGGTT +
Preference number: 4 (lower is better)
Translates to: VVRSGLLSGASSGRCVRCAGLPR*GAGLSV
Trigger: AACCGAGAGGCCCGCGCCCCACCGAGGAAGCCCCGC...ACATCTCACGCACCTCCCAGAGCTGGCGCCACTGAGTAATCCGGACCTCACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp CCCTCACTTGTCCCAGGGAGGAAACTCCGGGGAGGGGGCGCCCTCCAGCTCCACACAGGAGCTGCCAGATaGGGACGGGGGAGGAACATC +
Preference number: 4 (lower is better)
Translates to: PSLVPGRKLRGGGALQLHTGAAR*GRGRNI
Trigger: GATGTTCCTCCCCCGTCCCCATCTGGCAGCTCCTGT...GTGGAGCTGGAGGGCGCCCCCTCCCCGGAGTTTCCTCCCTGGGACAAGTGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp AGCAGACAGGCGCTAAGGACAAAGCGCGTGCGACTCCAGCCCTCCCTCAGGCCCCGCAGGTCAGGGCCCTaGGGCTGGAGGTACTGTACC +
Preference number: 4 (lower is better)
Translates to: SRQALRTKRVRLQPSLRPRRSGP*GWRYCT
Trigger: GGTACAGTACCTCCAGCCCCAGGGCCCTGACCTGCG...GGGCCTGAGGGAGGGCTGGAGTCGCACGCGCTTTGTCCTTAGCGCCTGTCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp GGCACTGAGGAGCTCTGGTCTCTGCGCGGCGGGGCGCCCTCTCCGAATCAGCCCGGCAGGACCTGGCTGTaGTGTTCAGAGGGAGGTCTA +
Preference number: 4 (lower is better)
Translates to: GTEELWSLRGGAPSPNQPGRTWL*CSEGGL
Trigger: TAGACCTCCCTCTGAACACCACAGCCAGGTCCTGCC...GGGCTGATTCGGAGAGGGCGCCCCGCCGCGCAGAGACCAGAGCTCCTCAGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CAGGGAGGCCAGTGGAGAGGATGTGGTCGTGGCCATGTGAGGCTTGGAGCAGGGTCTTCCCCCGGGAGGTaGCGGGGGTCTGCGACCGAA +
Preference number: 4 (lower is better)
Translates to: QGGQWRGCGRGHVRLGAGSSPGR*RGSATE
Trigger: TTCGGTCGCAGACCCCCGCCACCTCCCGGGGGAAGA...CCCTGCTCCAAGCCTCACATGGCCACGACCACATCCTCTCCACTGGCCTCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000413737.2
ENST00000626701.1
ENST00000628272.1
CDS-3UTR CCA 90 bp CAGGGAGGCCAGTGGAGAGGATGTGGTCGTGGCCATGTGAGGCTTGGAGCAGGGCTCGGCAGCGACCCCTaGCGGTCTGGGGAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: QGGQWRGCGRGHVRLGAGLGSDP*RSGEAS
Trigger: AGAAGCCTCCCCAGACCGCCAGGGGTCGCTGCCGAG...CCCTGCTCCAAGCCTCACATGGCCACGACCACATCCTCTCCACTGGCCTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413737.2
ENST00000626701.1
CDS-3UTR CCA 90 bp CAGGGAGGCCAGTGGAGAGGATGTGGTCGTGGCCATGTGAGGCTTGGAGCAGGGATGCCGGCGGGACTCTaGGTCAGGGCTTCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: QGGQWRGCGRGHVRLGAGMPAGL*VRASGG
Trigger: CCCGCCAGAAGCCCTGACCCAGAGTCCCGCCGGCAT...CCCTGCTCCAAGCCTCACATGGCCACGACCACATCCTCTCCACTGGCCTCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626701.1
ENST00000628272.1
CDS-3UTR TCA 90 bp GGCCCCAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCTGCAGAAGGACTCCATaGTGCCTGCAATGCCCACCA +
Preference number: 4 (lower is better)
Translates to: GPRARRRRLGPSGETGAACRRTP*CLQCPP
Trigger: TGGTGGGCATTGCAGGCATCATGGAGTCCTTCTGCA...GGCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTGGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR TCA 90 bp CCCTCACTTGTCCCAGGGAGGAAACTCCGGGGAGGGGGCGCCCTCCAGCTCCACCATCACAGGTGGCGTTaGGGAAGCGAGAGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: PSLVPGRKLRGGGALQLHHHRWR*GSERSR
Trigger: TCTGCTCCTCTCGCTTCCTCAACGCCACCTGTGATG...GTGGAGCTGGAGGGCGCCCCCTCCCCGGAGTTTCCTCCCTGGGACAAGTGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp ACGCGATGTCTCCTGTACACTATGTATAGGCTCGGCCGCCCGCGCCCCACGGCTAGGCGACAAGCCGACTaGGGAGAGACGCCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: TRCLLYTMYRLGRPRPTARRQAD*GETPAP
Trigger: GGGAGCAGGCGTCTCTCCTCAGTCGGCTTGTCGCCT...AGCCGTGGGGCGCGGGCGGCCGAGCCTATACATAGTGTACAGGAGACATCGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp CCGCAGTGGAAGCTCACGTCCGCTGGGAGGCGAATCCAGGAAAAGTTGGACCCTTCCCTCGAGATGGCCTaGAGCAGGCGTGGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: PQWKLTSAGRRIQEKLDPSLEMA*SRRGAP
Trigger: GGGGGCCCCACGCCTGCTGCAGGCCATCTCGAGGGA...AGGGTCCAACTTTTCCTGGATTCGCCTCCCAGCGGACGTGAGCTTCCACTGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp CCCTCACTTGTCCCAGGGAGGAAACTCCGGGGAGGGGGCGCCCTCCAGCTCCACCCTGATAGACTCTTCTaGCCGCTGGGCCTGTGGATG +
Preference number: 4 (lower is better)
Translates to: PSLVPGRKLRGGGALQLHPDRLF*PLGLWM
Trigger: CATCCACAGGCCCAGCGGGCAGAAGAGTCTATCAGG...GTGGAGCTGGAGGGCGCCCCCTCCCCGGAGTTTCCTCCCTGGGACAAGTGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp AAAGGGCGAAGAGGCGAGAGCAGGACGGAGGTGTCGAGGGAACGAGGCCACGACCTGAGGAGAGACGCCTaGTCCCCAGCGAAGGCACCG +
Preference number: 4 (lower is better)
Translates to: KGRRGESRTEVSRERGHDLRRDA*SPAKAP
Trigger: CGGTGCCTTCGCTGGGGAGCAGGCGTCTCTCCTCAG...GTCGTGGCCTCGTTCCCTCGACACCTCCGTCCTGCTCTCGCCTCTTCGCCCTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp GGTCCCCGGGAGACGGAGCTAGAGGCCGCTGCTAAGCAGCGAGGCCCGGCCCCAGGAACGAGCATGCAGTaGCTGACCCCCTTAGTAATG +
Preference number: 4 (lower is better)
Translates to: GPRETELEAAAKQRGPAPGTSMQ*LTPLVM
Trigger: CATTACTAAGGGGGTCAGGCACTGCATGCTCGTTCC...TGGGGCCGGGCCTCGCTGCTTAGCAGCGGCCTCTAGCTCCGTCTCCCGGGGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp ATCGAAAGCGTGGCCTCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACAGGCACGGAGGAAGAAGCTaGAGTGCCCGCCCGCCCGGC +
Preference number: 4 (lower is better)
Translates to: IESVASSWVSSAASALHRHGGRS*SARPPG
Trigger: GCCGGGCGGGCGGGCACTGCAGCTTCTTCCTCCGTG...CCTGTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGAGGCCACGCTTTCGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR GCA 90 bp GGAGGCCAGTGGAGAGGATGTGGTCGTGGCCATGTGAGGCTTGGAGCAGGGCGAGGGTCTGCGACCGAATaGCGGCGGGACTCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: GGQWRGCGRGHVRLGAGRGSATE*RRDSGS
Trigger: TGACCCAGAGTCCCGCCGGCATTCGGTCGCAGACCC...TCGCCCTGCTCCAAGCCTCACATGGCCACGACCACATCCTCTCCACTGGCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626701.1
ENST00000628272.1
CDS-3UTR CCA 90 bp CAGACAGGCGCTAAGGACAAAGCGCGTGCGACTCCAGCCCTCCCTCAGGCCCAGTCAGGTTGTTTAGCATaGTGGCGGCGCGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: QTGAKDKARATPALPQAQSGCLA*WRRGPW
Trigger: CCAGGGGCCGCGCCGCCACCATGCTAAACAACCTGA...CTGGGCCTGAGGGAGGGCTGGAGTCGCACGCGCTTTGTCCTTAGCGCCTGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp CCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCCAGCTCCAGCTCGAAGGTGCCCATGCGTaGGGCCTGCACCGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: PNLPQPHLTLSGWRQLQLEGAHA*GLHRLL
Trigger: AAGAAGCCGGTGCAGGCCCCACGCATGGGCACCTTC...GAGCTGGAGCTGGCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp CGGCCCCAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCCACAATCACGCCCTTaGTCAGGTAGGAGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: RPQSTEKAAGSLRRDRSCPQSRP*SGRSSR
Trigger: TCTGGAGCTCCTACCTGACCAAGGGCGTGATTGTGG...GCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTGGGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616933.4
CDS-3UTR CCA 90 bp GGCCCCAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCCTAAGTGGCCAGCTGTaGTTTCCCGGACCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: GPRARRRRLGPSGETGAALSGQL*FPGPAQ
Trigger: TTGAGCTGGTCCGGGAAACCACAGCTGGCCACTTAG...GGCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTGGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp GGCACTGAGGAGCTCTGGTCTCTGCGCGGCGGGGCGCCCTCTCCGAATCAGCCCGGGAGAGCTCGACTATaGCGAGAAGTCTGTTGCGCT +
Preference number: 4 (lower is better)
Translates to: GTEELWSLRGGAPSPNQPGRARL*REVCCA
Trigger: AGCGCAACAGACTTCTCGCCATAGTCGAGCTCTCCC...GGGCTGATTCGGAGAGGGCGCCCCGCCGCGCAGAGACCAGAGCTCCTCAGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp TTACTCAGTGGCGCCAGCTCTGGGAGGTGCGTGAGATGTCAAGCTAGGTGCGCAGCGGGGCTTCCTCGGTaGGGCGCGGGCCTCTCGGTT +
Preference number: 4 (lower is better)
Translates to: LLSGASSGRCVRCQARCAAGLPR*GAGLSV
Trigger: AACCGAGAGGCCCGCGCCCCACCGAGGAAGCCCCGC...TGCGCACCTAGCTTGACATCTCACGCACCTCCCAGAGCTGGCGCCACTGAGTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp CAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCAGATGTCAGGGCCCTGGGGCTaGAGGTACTGTACCCAGTCC +
Preference number: 4 (lower is better)
Translates to: QSTEKAAGSLRRDRSCQMSGPWG*RYCTQS
Trigger: GGACTGGGTACAGTACCTCCAGCCCCAGGGCCCTGA...CATCTGGCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp CAAACTGGCACTGAGGAGCTCTGGTCTCTGCGCGGCGGGGCGCCCTCTCCGAATTCAGGGCCCTGGGGCTaGAGGTACTGTACCCAGTCC +
Preference number: 4 (lower is better)
Translates to: QTGTEELWSLRGGAPSPNSGPWG*RYCTQS
Trigger: GGACTGGGTACAGTACCTCCAGCCCCAGGGCCCTGA...ATTCGGAGAGGGCGCCCCGCCGCGCAGAGACCAGAGCTCCTCAGTGCCAGTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CAGACAGGCGCTAAGGACAAAGCGCGTGCGACTCCAGCCCTCCCTCAGGCCCAGACACCTGACGCTGTCTaGGTGGCGCCAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: QTGAKDKARATPALPQAQTPDAV*VAPAPA
Trigger: AGCTGGAGCTGGCGCCACCCAGACAGCGTCAGGTGT...CTGGGCCTGAGGGAGGGCTGGAGTCGCACGCGCTTTGTCCTTAGCGCCTGTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp CAAACTGGCACTGAGGAGCTCTGGTCTCTGCGCGGCGGGGCGCCCTCTCCGAATACACCTGACGCTGTCTaGGTGGCGCCAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: QTGTEELWSLRGGAPSPNTPDAV*VAPAPA
Trigger: AGCTGGAGCTGGCGCCACCCAGACAGCGTCAGGTGT...ATTCGGAGAGGGCGCCCCGCCGCGCAGAGACCAGAGCTCCTCAGTGCCAGTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp GGCCCCAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCAAGGATGCAGGGGGCTaGTGTCTAACACCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GPRARRRRLGPSGETGAAKDAGG*CLTPPA
Trigger: AGCTGGAGGTGTTAGACACCAGCCCCCTGCATCCTT...GGCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTGGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR CAA 72 bp GGGAGGGGGCGCCCTCCAGCTCCACAATTTCAGTCTTaGGCGAGGAGCCATGGGATACGGGGAGCAGGCGAC +
Preference number: 4 (lower is better)
Translates to: GRGRPPAPQFQS*ARSHGIRGAGD
Trigger: GTCGCCTGCTCCCCGTATCCCATGGCTCCTCGCCAAAGACTGAAATTGTGGAGCTGGAGGGCGCCCCCTCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp GAAAGCGTGGCCTCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACAGGCCACAGCTGGGAGGTCAGTaGGAGCAGCTGGGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: ESVASSWVSSAASALHRPQLGGQ*EQLGVH
Trigger: GTGCACCCCCAGCTGCTCTCACTGACCTCCCAGCTG...TGGCCTGTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGAGGCCACGCTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR TCA 90 bp GGTGTCGAGGGAACGAGGCCACGACCCCCGCCTGGGCCTAAAGCACTTTCGCTCGCTCTGGGAGGTGCGTaGGATGTCAAGCTAGGTGCG +
Preference number: 4 (lower is better)
Translates to: GVEGTRPRPPPGPKALSLALGGA*DVKLGA
Trigger: CGCACCTAGCTTGACATCTCACGCACCTCCCAGAGC...GAGCGAAAGTGCTTTAGGCCCAGGCGGGGGTCGTGGCCTCGTTCCCTCGACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp CAGGGAGGCCAGTGGAGAGGATGTGGTCGTGGCCATGTGAGGCTTGGAGCAGGGGTGGTCGTGGCCATGTaGGGCTTGGAGCAGGGCGAT +
Preference number: 4 (lower is better)
Translates to: QGGQWRGCGRGHVRLGAGVVVAM*GLEQGD
Trigger: ATCGCCCTGCTCCAAGCCTCACATGGCCACGACCAC...CCCTGCTCCAAGCCTCACATGGCCACGACCACATCCTCTCCACTGGCCTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413737.2
ENST00000626701.1
ENST00000628272.1
CDS-3UTR TCA 90 bp CAGGGAGGCCAGTGGAGAGGATGTGGTCGTGGCCATGTGAGGCTTGGAGCAGGGCCTGAGGGGAGACTTTaGCGTCTTCCCCCGGGAGGT +
Preference number: 4 (lower is better)
Translates to: QGGQWRGCGRGHVRLGAGPEGRL*RLPPGG
Trigger: ACCTCCCGGGGGAAGACGTCAAAGTCTCCCCTCAGG...CCCTGCTCCAAGCCTCACATGGCCACGACCACATCCTCTCCACTGGCCTCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626701.1
CDS-3UTR GCA 90 bp GGCCCCAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCCACCTCGTCGAGGGATaGAATGAGGATGCCAATCTC +
Preference number: 4 (lower is better)
Translates to: GPRARRRRLGPSGETGAAHLVEG*NEDANL
Trigger: GAGATTGGCATCCTCATTGCATCCCTCGACGAGGTG...GGCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp TCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCTGTGGTGTTCAGAGGGACTCGCCTCCCCGCAGTaGCCCCAGCGGGAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: SGIFRPPEGRTWLWCSEGLASPQ*PQRESS
Trigger: CGAGCTCTCCCGCTGGGGGCACTGCGGGGAGGCGAG...TCCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp AGCAGACAGGCGCTAAGGACAAAGCGCGTGCGACTCCAGCCCTCCCTCAGGCCCGGTTGCTCGCGTCTCTaGAGCCGCAGTGGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: SRQALRTKRVRLQPSLRPGCSRL*SRSGSS
Trigger: TGAGCTTCCACTGCGGCTGCAGAGACGCGAGCAACC...GGGCCTGAGGGAGGGCTGGAGTCGCACGCGCTTTGTCCTTAGCGCCTGTCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp CGGCCCCAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCGGAACGAGCATGCAGTaGCTGACCCCCTTAGTAATG +
Preference number: 4 (lower is better)
Translates to: RPQSTEKAAGSLRRDRSCGTSMQ*LTPLVM
Trigger: CATTACTAAGGGGGTCAGGCACTGCATGCTCGTTCC...GCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTGGGGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp AGCAGACAGGCGCTAAGGACAAAGCGCGTGCGACTCCAGCCCTCCCTCAGGCCCAGATGTCAAGCTAGGTaGGCAGGTCAGGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SRQALRTKRVRLQPSLRPRCQAR*AGQGPG
Trigger: CCCAGGGCCCTGACCTGCGCACCTAGCTTGACATCT...GGGCCTGAGGGAGGGCTGGAGTCGCACGCGCTTTGTCCTTAGCGCCTGTCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp TCTTGGTGTGTGGGGGCCCTTCCTCCAGGCGTAAGAGGGCATAGCGAGCCGCACTCAGGTTGTTTAGCATaGTGGCGGCGCGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: SWCVGALPPGVRGHSEPHSGCLA*WRRGPW
Trigger: CCAGGGGCCGCGCCGCCACCATGCTAAACAACCTGA...GTGCGGCTCGCTATGCCCTCTTACGCCTGGAGGAAGGGCCCCCACACACCAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
CDS-3UTR CCA 90 bp AGCAGACAGGCGCTAAGGACAAAGCGCGTGCGACTCCAGCCCTCCCTCAGGCCCAGCGTGGCCTCCAGTTaGGTGTCCTCAGCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: SRQALRTKRVRLQPSLRPSVASS*VSSAAS
Trigger: AGACGCTGCTGAGGACACCCAACTGGAGGCCACGCT...GGGCCTGAGGGAGGGCTGGAGTCGCACGCGCTTTGTCCTTAGCGCCTGTCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp ACTGGCAGACCTCCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCTTCCGCCAGACCTTGTaGTGCCGCAGCAGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: TGRPPNLPQPHLTLSGWRFRQTL*CRSRKG
Trigger: GCCCTTCCTGCTGCGGCACCACAAGGTCTGGCGGAA...GCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGGAGGTCTGCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CGTCTCCTCCGGCGAGACGAGGCCGGGCTTAGAAAAAGGGCAGCGAAGACCCAGTTCCGCCAGACCTTGTaGTGCCGCAGCAGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: RLLRRDEAGLRKRAAKTQFRQTL*CRSRKG
Trigger: GCCCTTCCTGCTGCGGCACCACAAGGTCTGGCGGAA...CTGGGTCTTCGCTGCCCTTTTTCTAAGCCCGGCCTCGTCTCGCCGGAGGAGACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CTGGGGCTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGCAGCCCCAACAGGCGTaGCCTCCGGGCTTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LGLEVLYPVPDGAGTSMQQPQQA*PPGFRQ
Trigger: CTGCCTGAAGCCCGGAGGCCACGCCTGTTGGGGCTG...CTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp AGGATGTGGTCGTGGCCATGTGAGGCTTGGAGCAGGGCGATGATGACAGAGGGGTCTTCCCCCGGGAGGTaGCGGGGGTCTGCGACCGAA +
Preference number: 4 (lower is better)
Translates to: RMWSWPCEAWSRAMMTEGSSPGR*RGSATE
Trigger: TTCGGTCGCAGACCCCCGCCACCTCCCGGGGGAAGA...CCCCTCTGTCATCATCGCCCTGCTCCAAGCCTCACATGGCCACGACCACATCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000413737.2
ENST00000626701.1
ENST00000628272.1
CDS-3UTR CCA 90 bp CCAGTGGAGAGGATGTGGTCGTGGCCATGTGAGGCTTGGAGCAGGGCGATGATGTCTTCCCCCGGGAGGTaGCGGGGGTCTGCGACCGAA +
Preference number: 4 (lower is better)
Translates to: PVERMWSWPCEAWSRAMMSSPGR*RGSATE
Trigger: TTCGGTCGCAGACCCCCGCCACCTCCCGGGGGAAGA...CATCATCGCCCTGCTCCAAGCCTCACATGGCCACGACCACATCCTCTCCACTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000413737.2
ENST00000626701.1
ENST00000628272.1
CDS-3UTR CCA 90 bp CCAGTGGAGAGGATGTGGTCGTGGCCATGTGAGGCTTGGAGCAGGGCGATGATGCGACCCCTGGCGGTCTaGGGAGGCTTCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PVERMWSWPCEAWSRAMMRPLAV*GGFSSS
Trigger: GGAGGAGGAGAAGCCTCCCCAGACCGCCAGGGGTCG...CATCATCGCCCTGCTCCAAGCCTCACATGGCCACGACCACATCCTCTCCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413737.2
ENST00000626701.1
CDS-3UTR CCA 90 bp CCAGTGGAGAGGATGTGGTCGTGGCCATGTGAGGCTTGGAGCAGGGCGATGATGCTCGGCAGCGACCCCTaGCGGTCTGGGGAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PVERMWSWPCEAWSRAMMLGSDP*RSGEAS
Trigger: AGAAGCCTCCCCAGACCGCCAGGGGTCGCTGCCGAG...CATCATCGCCCTGCTCCAAGCCTCACATGGCCACGACCACATCCTCTCCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413737.2
ENST00000626701.1
CDS-3UTR CCA 90 bp CAGGGAGGCCAGTGGAGAGGATGTGGTCGTGGCCATGTGAGGCTTGGAGCAGGGAGGCAGGGAGGCCAGTaGAGAGGATGTGGTCGTGGC +
Preference number: 4 (lower is better)
Translates to: QGGQWRGCGRGHVRLGAGRQGGQ*RGCGRG
Trigger: GCCACGACCACATCCTCTCCACTGGCCTCCCTGCCT...CCCTGCTCCAAGCCTCACATGGCCACGACCACATCCTCTCCACTGGCCTCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413737.2
ENST00000626701.1
ENST00000628272.1
CDS-3UTR CCA 90 bp GGAGGCCAGTGGAGAGGATGTGGTCGTGGCCATGTGAGGCTTGGAGCAGGGCGAAGGCAGGGAGGCCAGTaGAGAGGATGTGGTCGTGGC +
Preference number: 4 (lower is better)
Translates to: GGQWRGCGRGHVRLGAGRRQGGQ*RGCGRG
Trigger: GCCACGACCACATCCTCTCCACTGGCCTCCCTGCCT...TCGCCCTGCTCCAAGCCTCACATGGCCACGACCACATCCTCTCCACTGGCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413737.2
ENST00000626701.1
ENST00000628272.1
CDS-3UTR TCA 90 bp CGGCCCCAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCTACAGGAGCAGCAGATaGACACCATGCAGAAGGACT +
Preference number: 4 (lower is better)
Translates to: RPQSTEKAAGSLRRDRSCYRSSR*TPCRRT
Trigger: AGTCCTTCTGCATGGTGTTCATCTGCTGCTCCTGTA...GCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTGGGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR TCA 90 bp GGTGTCGAGGGAACGAGGCCACGACCCCCGCCTGGGCCTAAAGCACTTTCGCTCTCATGGAGATGGCCGTaGGCATCGTACAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: GVEGTRPRPPPGPKALSLSWRWP*ASYRSS
Trigger: GCTGCTCCTGTACGATGCTCACGGCCATCTCCATGA...GAGCGAAAGTGCTTTAGGCCCAGGCGGGGGTCGTGGCCTCGTTCCCTCGACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp CAGACAGGCGCTAAGGACAAAGCGCGTGCGACTCCAGCCCTCCCTCAGGCCCAGTCATGGAGATGGCCGTaGGCATCGTACAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: QTGAKDKARATPALPQAQSWRWP*ASYRSS
Trigger: GCTGCTCCTGTACGATGCTCACGGCCATCTCCATGA...CTGGGCCTGAGGGAGGGCTGGAGTCGCACGCGCTTTGTCCTTAGCGCCTGTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR TCA 90 bp AGGCCGGGCTTAGAAAAAGGGCAGCGAAGACCCAGGGGCCAAACTGGCACTGAGCAGCTGGGAGGTCAGTaGGAGCAGCTGGGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: RPGLEKGQRRPRGQTGTEQLGGQ*EQLGVH
Trigger: GTGCACCCCCAGCTGCTCTCACTGACCTCCCAGCTG...CTCAGTGCCAGTTTGGCCCCTGGGTCTTCGCTGCCCTTTTTCTAAGCCCGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp CAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCAGATGCGCTGGGCCTGTGGATaGTTTTCCAGAAAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: QSTEKAAGSLRRDRSCQMRWACG*FSRKVP
Trigger: GGGCACCTTTCTGGAAAATCATCCACAGGCCCAGCG...CATCTGGCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp AACTGGCAGACCTCCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGGGGCCAAACTGGCACTaGGGAGCTCTGGTCTCTGCG +
Preference number: 4 (lower is better)
Translates to: NWQTSKPTPATPDAVWVAGPNWH*GALVSA
Trigger: CGCAGAGACCAGAGCTCCTCAGTGCCAGTTTGGCCC...CGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGGAGGTCTGCCAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp ACTGGCAGACCTCCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCGCTCTGGGAGGTGCGTaGGATGTCAAGCTAGGTGCG +
Preference number: 4 (lower is better)
Translates to: TGRPPNLPQPHLTLSGWRALGGA*DVKLGA
Trigger: CGCACCTAGCTTGACATCTCACGCACCTCCCAGAGC...GCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGGAGGTCTGCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR TCA 90 bp AGGATGTGGTCGTGGCCATGTGAGGCTTGGAGCAGGGCGATGATGACAGAGGGGTCGCTGGGGCCACTTTaGCGTCTTCCCCCGGGAGGT +
Preference number: 4 (lower is better)
Translates to: RMWSWPCEAWSRAMMTEGSLGPL*RLPPGG
Trigger: ACCTCCCGGGGGAAGACGTCAAAGTGGCCCCAGCGA...CCCCTCTGTCATCATCGCCCTGCTCCAAGCCTCACATGGCCACGACCACATCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413737.2
CDS-3UTR GCA 90 bp CAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCAGATGTGCTTTCCTTGGGGTTaGCATCACCCGGGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: QSTEKAAGSLRRDRSCQMCFPWG*HHPGWL
Trigger: GAGCCAACCCGGGTGATGGCAACCCCAAGGAAAGCA...CATCTGGCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp GGCACTGAGGAGCTCTGGTCTCTGCGCGGCGGGGCGCCCTCTCCGAATCAGCCCGATTTTCCAGAAAGGTaGCCTCAAGGACAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GTEELWSLRGGAPSPNQPDFPER*PQGQSP
Trigger: TGGGCTCTGTCCTTGAGGGCACCTTTCTGGAAAATC...GGGCTGATTCGGAGAGGGCGCCCCGCCGCGCAGAGACCAGAGCTCCTCAGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp CGGCCCCAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCGCCCTTATTCTTCTCTaGCACCGACTTGTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: RPQSTEKAAGSLRRDRSCALILL*HRLVLG
Trigger: ACCAAGGACAAGTCGGTGGCAGAGAAGAATAAGGGC...GCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTGGGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp TCTTGGTGTGTGGGGGCCCTTCCTCCAGGCGTAAGAGGGCATAGCGAGCCGCACCATCACCATTGCGGTTaGGGGGAGGCCCAGGCATGT +
Preference number: 4 (lower is better)
Translates to: SWCVGALPPGVRGHSEPHHHHCG*GEAQAC
Trigger: ACATGCCTGGGCCTCCCCGCAACCGCAATGGTGATG...GTGCGGCTCGCTATGCCCTCTTACGCCTGGAGGAAGGGCCCCCACACACCAAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR GCA 90 bp GTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCTCTGGGAGGTGCGTGAGATGTAGGCGAGACAGGAGCTaGCAGATGGGGACGGGGGAG +
Preference number: 4 (lower is better)
Translates to: VVRSGLLSGASSGRCVRCRRDRS*QMGTGE
Trigger: CTCCCCCGTCCCCATCTGGCAGCTCCTGTCTCGCCT...ACATCTCACGCACCTCCCAGAGCTGGCGCCACTGAGTAATCCGGACCTCACCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp AAAGGGCGAAGAGGCGAGAGCAGGACGGAGGTGTCGAGGGAACGAGGCCACGACAGATGTCAAGCTAGGTaGGCAGGTCAGGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: KGRRGESRTEVSRERGHDRCQAR*AGQGPG
Trigger: CCCAGGGCCCTGACCTGCGCACCTAGCTTGACATCT...GTCGTGGCCTCGTTCCCTCGACACCTCCGTCCTGCTCTCGCCTCTTCGCCCTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp ACTGGCAGACCTCCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCAGATGTCAAGCTAGGTaGGCAGGTCAGGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: TGRPPNLPQPHLTLSGWRRCQAR*AGQGPG
Trigger: CCCAGGGCCCTGACCTGCGCACCTAGCTTGACATCT...GCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGGAGGTCTGCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp CGGCCCCAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCGGAAACTTTGCTCTTaGCAACCAGACAATCTGGGC +
Preference number: 4 (lower is better)
Translates to: RPQSTEKAAGSLRRDRSCRKLCS*QPDNLG
Trigger: GCCCAGATTGTCTGGTTGGCAAGAGCAAAGTTTCCG...GCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTGGGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp AGGATGTGGTCGTGGCCATGTGAGGCTTGGAGCAGGGCGATGATGACAGAGGGGGGGTCTGCGACCGAATaGCGGCGGGACTCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: RMWSWPCEAWSRAMMTEGGSATE*RRDSGS
Trigger: TGACCCAGAGTCCCGCCGGCATTCGGTCGCAGACCC...CCCCTCTGTCATCATCGCCCTGCTCCAAGCCTCACATGGCCACGACCACATCCT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000626701.1
ENST00000628272.1
CDS-3UTR CCA 90 bp GGCCTCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACAGGTTGTTTAGCATGGTaGCGGCGCGGCCCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: GLQLGVLSSVCTAQARFTGCLAW*RRGPWS
Trigger: GGACCAGGGGCCGCGCCGCCACCATGCTAAACAACC...TGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
CDS-3UTR CCA 90 bp CAGACAGGCGCTAAGGACAAAGCGCGTGCGACTCCAGCCCTCCCTCAGGCCCAGAGGGACTGCTTTCCTTaGGGTTGCCATCACCCGGGT +
Preference number: 4 (lower is better)
Translates to: QTGAKDKARATPALPQAQRDCFP*GCHHPG
Trigger: ACCCGGGTGATGGCAACCCCAAGGAAAGCAGTCCCT...CTGGGCCTGAGGGAGGGCTGGAGTCGCACGCGCTTTGTCCTTAGCGCCTGTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp CAAACTGGCACTGAGGAGCTCTGGTCTCTGCGCGGCGGGGCGCCCTCTCCGAATGTGGGGATTGACTTCTaGGCATCCCTCAGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: QTGTEELWSLRGGAPSPNVGIDF*ASLRSP
Trigger: TGGGGACCTGAGGGATGCCCAGAAGTCAATCCCCAC...ATTCGGAGAGGGCGCCCCGCCGCGCAGAGACCAGAGCTCCTCAGTGCCAGTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CGGCCCCAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCATCTGTTTGAGGATCTaGGAACGCTGCTCCATCACC +
Preference number: 4 (lower is better)
Translates to: RPQSTEKAAGSLRRDRSCICLRI*ERCSIT
Trigger: GGTGATGGAGCAGCGTTCCCAGATCCTCAAACAGAT...GCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTGGGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGTGCCTGCATCACGGGCGGCTCTaGGGCCTCTCAGTGGGTCCG +
Preference number: 4 (lower is better)
Translates to: LEVLYPVPDGAGTSMQCLHHGRL*GLSVGP
Trigger: CGGACCCACTGAGAGGCCCCAGAGCCGCCCGTGATG...CAGGCACTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp AGGGCCCTGGGGCTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCGTCCGGATTACTCAGTaGCGCCAGCTCTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: RALGLEVLYPVPDGAGTSVRITQ*RQLWEV
Trigger: CACCTCCCAGAGCTGGCGCCACTGAGTAATCCGGAC...GCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAGCCCCAGGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp CAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCAGATGCCAGAAGGCAGGACCTaGCTGTGGTGTTCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: QSTEKAAGSLRRDRSCQMPEGRT*LWCSEG
Trigger: TCCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGG...CATCTGGCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR TCA 90 bp AGCAGACAGGCGCTAAGGACAAAGCGCGTGCGACTCCAGCCCTCCCTCAGGCCCTGCAGAAGGACTCCATaGTGCCTGCAATGCCCACCA +
Preference number: 4 (lower is better)
Translates to: SRQALRTKRVRLQPSLRPCRRTP*CLQCPP
Trigger: TGGTGGGCATTGCAGGCATCATGGAGTCCTTCTGCA...GGGCCTGAGGGAGGGCTGGAGTCGCACGCGCTTTGTCCTTAGCGCCTGTCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR TCA 90 bp GAAAGCGTGGCCTCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGGTGCCAGTGGGGATTaGCTTCTGGGCATCCCTCAG +
Preference number: 4 (lower is better)
Translates to: ESVASSWVSSAASALHRPGASGD*LLGIPQ
Trigger: CTGAGGGATGCCCAGAAGTCAATCCCCACTGGCACC...TGGCCTGTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGAGGCCACGCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR TCA 90 bp TCTTGGTGTGTGGGGGCCCTTCCTCCAGGCGTAAGAGGGCATAGCGAGCCGCACCATAGCGAGCCGCACTaGGAGACAGACCTCGTATCC +
Preference number: 4 (lower is better)
Translates to: SWCVGALPPGVRGHSEPHHSEPH*ETDLVS
Trigger: GGATACGAGGTCTGTCTCTCAGTGCGGCTCGCTATG...GTGCGGCTCGCTATGCCCTCTTACGCCTGGAGGAAGGGCCCCCACACACCAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
CDS-3UTR TCA 90 bp CCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCCAGCTCCAGCTCTGGAAACGTTCTTGGTaGCCAGCAGGGCTAAGTGGC +
Preference number: 4 (lower is better)
Translates to: PNLPQPHLTLSGWRQLQLWKRSW*PAGLSG
Trigger: GCCACTTAGCCCTGCTGGTCACCAAGAACGTTTCCA...GAGCTGGAGCTGGCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp GGTCCCCGGGAGACGGAGCTAGAGGCCGCTGCTAAGCAGCGAGGCCCGGCCCCATTAAATGCATCTGTTTaGGGATCTGGGAACGCTGCT +
Preference number: 4 (lower is better)
Translates to: GPRETELEAAAKQRGPAPLNASV*GSGNAA
Trigger: AGCAGCGTTCCCAGATCCTCAAACAGATGCATTTAA...TGGGGCCGGGCCTCGCTGCTTAGCAGCGGCCTCTAGCTCCGTCTCCCGGGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp ACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGTACCCCAGCCACACCTaGCGCTGTCTGGGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: TAHHISSGIFRPPEGRTWYPSHT*RCLGGA
Trigger: GGCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTA...CCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR TCA 90 bp CCAGTGGAGAGGATGTGGTCGTGGCCATGTGAGGCTTGGAGCAGGGCGATGATGGTGGTCGTGGCCATGTaGGGCTTGGAGCAGGGCGAT +
Preference number: 4 (lower is better)
Translates to: PVERMWSWPCEAWSRAMMVVVAM*GLEQGD
Trigger: ATCGCCCTGCTCCAAGCCTCACATGGCCACGACCAC...CATCATCGCCCTGCTCCAAGCCTCACATGGCCACGACCACATCCTCTCCACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413737.2
ENST00000626701.1
ENST00000628272.1
CDS-3UTR TCA 90 bp AGGATGTGGTCGTGGCCATGTGAGGCTTGGAGCAGGGCGATGATGACAGAGGGGGTGGTCGTGGCCATGTaGGGCTTGGAGCAGGGCGAT +
Preference number: 4 (lower is better)
Translates to: RMWSWPCEAWSRAMMTEGVVVAM*GLEQGD
Trigger: ATCGCCCTGCTCCAAGCCTCACATGGCCACGACCAC...CCCCTCTGTCATCATCGCCCTGCTCCAAGCCTCACATGGCCACGACCACATCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000413737.2
ENST00000626701.1
ENST00000628272.1
CDS-3UTR GCA 90 bp CGGCCCCAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCACCATTCGTTGCAATTaGACTCATGGAGATGGCCGT +
Preference number: 4 (lower is better)
Translates to: RPQSTEKAAGSLRRDRSCTIRCN*THGDGR
Trigger: ACGGCCATCTCCATGAGTGCAATTGCAACGAATGGT...GCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTGGGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp CCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCCAGCTCCAGCTCCCCACTGGCATCTTCTaGCTTGAAGATGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: PNLPQPHLTLSGWRQLQLPTGIF*LEDGHG
Trigger: GCCATGGCCATCTTCAAGGCAGAAGATGCCAGTGGG...GAGCTGGAGCTGGCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616933.4
CDS-3UTR GCA 90 bp CGTCTCCTCCGGCGAGACGAGGCCGGGCTTAGAAAAAGGGCAGCGAAGACCCAGGTCCTCAGCAGCGTCTaGACTGCACAGGCCAGATTC +
Preference number: 4 (lower is better)
Translates to: RLLRRDEAGLRKRAAKTQVLSSV*TAQARF
Trigger: GAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGAC...CTGGGTCTTCGCTGCCCTTTTTCTAAGCCCGGCCTCGTCTCGCCGGAGGAGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp TGGCAGACCTCCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCCACCTGATAGACTCTTCTaGCCGCTGGGCCTGTGGATG +
Preference number: 4 (lower is better)
Translates to: WQTSKPTPATPDAVWVAPPDRLF*PLGLWM
Trigger: CATCCACAGGCCCAGCGGGCAGAAGAGTCTATCAGG...TGGCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGGAGGTCTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp CCAGCTCTGCCTTGGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGAGGAGCTCTGGTCTCTaGGCGGCGGGGCGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: PALPWAQRKRGGEVRITQRSSGL*AAGRPL
Trigger: GAGAGGGCGCCCCGCCGCGCAGAGACCAGAGCTCCT...CTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAGGCAGAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp TCTACTGAAGGATGCAGGGGGCTGGTGTCTAACACCTCCAGCTTCCTGATTGAGCTCGCCTCCCCGCAGTaGCCCCAGCGGGAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: STEGCRGLVSNTSSFLIELASPQ*PQRESS
Trigger: CGAGCTCTCCCGCTGGGGGCACTGCGGGGAGGCGAG...CTCAATCAGGAAGCTGGAGGTGTTAGACACCAGCCCCCTGCATCCTTCAGTAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp AACTGGCAGACCTCCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGGGTTGCTCGCGTCTCTaGAGCCGCAGTGGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: NWQTSKPTPATPDAVWVAGCSRL*SRSGSS
Trigger: TGAGCTTCCACTGCGGCTGCAGAGACGCGAGCAACC...CGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGGAGGTCTGCCAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp GAAAGCGTGGCCTCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACAGGCCACCGATGAGAAGAGGTTaGTCGCGTCTCTGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: ESVASSWVSSAASALHRPPMRRG*SRLCSR
Trigger: GCGGCTGCAGAGACGCGAGCAACCTCTTCTCATCGG...TGGCCTGTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGAGGCCACGCTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR GCA 90 bp CTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGTGCCTGCTGAGGAGAGACGCCTaGTCCCCAGCGAAGGCACCG +
Preference number: 4 (lower is better)
Translates to: LEVLYPVPDGAGTSMQCLLRRDA*SPAKAP
Trigger: CGGTGCCTTCGCTGGGGAGCAGGCGTCTCTCCTCAG...CAGGCACTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp GGTGCTGGAACGAGCATGCAGTGCCTGACCCCCTTAGTAATGTGCCCTAGGGGAAGGCGAGACAGGAGCTaGCAGATGGGGACGGGGGAG +
Preference number: 4 (lower is better)
Translates to: GAGTSMQCLTPLVMCPRGRRDRS*QMGTGE
Trigger: CTCCCCCGTCCCCATCTGGCAGCTCCTGTCTCGCCT...TCCCCTAGGGCACATTACTAAGGGGGTCAGGCACTGCATGCTCGTTCCAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp CCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCCAGCTCCAGCTCCGCCAGCTCCAGCTCTaGCTTGGGCTCAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: PNLPQPHLTLSGWRQLQLRQLQL*LGLKGK
Trigger: TTTTCCTTTGAGCCCAAGGCAGAGCTGGAGCTGGCG...GAGCTGGAGCTGGCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp GGTGTCGAGGGAACGAGGCCACGACCCCCGCCTGGGCCTAAAGCACTTTCGCTCCGCCAGCTCCAGCTCTaGCTTGGGCTCAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: GVEGTRPRPPPGPKALSLRQLQL*LGLKGK
Trigger: TTTTCCTTTGAGCCCAAGGCAGAGCTGGAGCTGGCG...GAGCGAAAGTGCTTTAGGCCCAGGCGGGGGTCGTGGCCTCGTTCCCTCGACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp GTCCTAGTTAGAGGAGAGCAGACAGGCGCTAAGGACAAAGCGCGTGCGACTCCAAGGAAGAAGCTGCAGTaGCCGCCCGCCCGGCGCACA +
Preference number: 4 (lower is better)
Translates to: VLVRGEQTGAKDKARATPRKKLQ*PPARRT
Trigger: TGTGCGCCGGGCGGGCGGGCACTGCAGCTTCTTCCT...TGGAGTCGCACGCGCTTTGTCCTTAGCGCCTGTCTGCTCTCCTCTAACTAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp TTACTCAGTGGCGCCAGCTCTGGGAGGTGCGTGAGATGTCAAGCTAGGTGCGCATGCCATCACCCGGGTTaGCTCCCCCATCGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: LLSGASSGRCVRCQARCACHHPG*LPHRRP
Trigger: AGGACGGCGATGGGGGAGCCAACCCGGGTGATGGCA...TGCGCACCTAGCTTGACATCTCACGCACCTCCCAGAGCTGGCGCCACTGAGTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp GGCCTCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACAGAAGGTGCCCATGCGTaGGGCCTGCACCGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GLQLGVLSSVCTAQARFTEGAHA*GLHRLL
Trigger: AAGAAGCCGGTGCAGGCCCCACGCATGGGCACCTTC...TGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
CDS-3UTR CCA 90 bp CTGGGGCTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGGAAGGTGCCCATGCGTaGGGCCTGCACCGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LGLEVLYPVPDGAGTSMQEGAHA*GLHRLL
Trigger: AAGAAGCCGGTGCAGGCCCCACGCATGGGCACCTTC...CTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAGCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp AGGGCCCTGGGGCTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCGGCACCCCCAAACTCTaGGCCCAGAGACCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: RALGLEVLYPVPDGAGTSGTPKL*AQRPGN
Trigger: ATTTCCAGGTCTCTGGGCCCAGAGTTTGGGGGTGCC...GCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAGCCCCAGGGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp AGGCCGGGCTTAGAAAAAGGGCAGCGAAGACCCAGGGGCCAAACTGGCACTGAGCAGAGGTGGTGGCGATaGCCAGGATGGTGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: RPGLEKGQRRPRGQTGTEQRWWR*PGWCQW
Trigger: CCACTGGCACCATCCTGGCCATCGCCACCACCTCTG...CTCAGTGCCAGTTTGGCCCCTGGGTCTTCGCTGCCCTTTTTCTAAGCCCGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCCAGCTCCAGCTCACCACATTCTGGTCTTaGTCCACACGCACCAGCACC +
Preference number: 4 (lower is better)
Translates to: PNLPQPHLTLSGWRQLQLTTFWS*STRTST
Trigger: GGTGCTGGTGCGTGTGGACCAAGACCAGAATGTGGT...GAGCTGGAGCTGGCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp GAAAGCGTGGCCTCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACAGGCCATTCCCCGCCTTCAGCTaGGAGGTCAGTGAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: ESVASSWVSSAASALHRPFPAFS*EVSESS
Trigger: GCTGCTCTCACTGACCTCCCAGCTGAAGGCGGGGAA...TGGCCTGTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGAGGCCACGCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR CCA 90 bp GGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGTGCCTGACCCGAGGCCCCCGGACTaGATCAGATGGGACACGCCA +
Preference number: 4 (lower is better)
Translates to: GGTVPSPRWCWNEHAVPDPRPPD*IRWDTP
Trigger: TGGCGTGTCCCATCTGATCCAGTCCGGGGGCCTCGG...GTCAGGCACTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp GCGGCGGGGCGCCCTCTCCGAATCAGCCCCAACAGGCGTGGCCTCCGGGCTTCAGAATCCAGGAAAAGTTaGACCCTTGTCTCACCTCAT +
Preference number: 4 (lower is better)
Translates to: AAGRPLRISPNRRGLRASESRKS*TLVSPH
Trigger: ATGAGGTGAGACAAGGGTCCAACTTTTCCTGGATTC...TGAAGCCCGGAGGCCACGCCTGTTGGGGCTGATTCGGAGAGGGCGCCCCGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CAGACAGGCGCTAAGGACAAAGCGCGTGCGACTCCAGCCCTCCCTCAGGCCCAGGAAGCTCACGTCCGCTaGGAGGCGAATCCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: QTGAKDKARATPALPQAQEAHVR*EANPGK
Trigger: TTTTCCTGGATTCGCCTCCCAGCGGACGTGAGCTTC...CTGGGCCTGAGGGAGGGCTGGAGTCGCACGCGCTTTGTCCTTAGCGCCTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CAGGGCCCAGGTCGGCTCTCCATTGGCCTTGCCATGGCCAAAGACCTGCAGGAATTTGGCGAGGAGCCATaGGATACGGGGAGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: QGPGRLSIGLAMAKDLQEFGEEP*DTGSRR
Trigger: TCGCCTGCTCCCCGTATCCCATGGCTCCTCGCCAAA...TTCCTGCAGGTCTTTGGCCATGGCAAGGCCAATGGAGAGCCGACCTGGGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR CCA 90 bp GGCCCCAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCCACAATTTCAGTCTTTaGCGAGGAGCCATGGGATAC +
Preference number: 4 (lower is better)
Translates to: GPRARRRRLGPSGETGAAHNFSL*RGAMGY
Trigger: GTATCCCATGGCTCCTCGCCAAAGACTGAAATTGTG...GGCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp TTACTCAGTGGCGCCAGCTCTGGGAGGTGCGTGAGATGTCAAGCTAGGTGCGCACACGGAGAAGGCGGCTaGGTCCCTCAGGCGAGACAG +
Preference number: 4 (lower is better)
Translates to: LLSGASSGRCVRCQARCAHGEGG*VPQARQ
Trigger: CTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTG...TGCGCACCTAGCTTGACATCTCACGCACCTCCCAGAGCTGGCGCCACTGAGTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp GGTGCTGGAACGAGCATGCAGTGCCTGACCCCCTTAGTAATGTGCCCTAGGGGACGCCTCAGACCAGGCTaGTGGAGCGGAAGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GAGTSMQCLTPLVMCPRGRLRPG*WSGRAK
Trigger: CTTGGCCCTTCCGCTCCACCAGCCTGGTCTGAGGCG...TCCCCTAGGGCACATTACTAAGGGGGTCAGGCACTGCATGCTCGTTCCAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp CAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCAGATGAGTCCCAGATGGTGCTaGAACGAGCATGCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: QSTEKAAGSLRRDRSCQMSPRWC*NEHAVP
Trigger: AGGCACTGCATGCTCGTTCCAGCACCATCTGGGACT...CATCTGGCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp GGTGTCGAGGGAACGAGGCCACGACCCCCGCCTGGGCCTAAAGCACTTTCGCTCGTACCCAGTCCCAGATaGTGCTGGAACGAGCATGCA +
Preference number: 4 (lower is better)
Translates to: GVEGTRPRPPPGPKALSLVPSPR*CWNEHA
Trigger: TGCATGCTCGTTCCAGCACCATCTGGGACTGGGTAC...GAGCGAAAGTGCTTTAGGCCCAGGCGGGGGTCGTGGCCTCGTTCCCTCGACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp ACGCGATGTCTCCTGTACACTATGTATAGGCTCGGCCGCCCGCGCCCCACGGCTGGCAGGACCTGGCTGTaGTGTTCAGAGGGAGGTCTA +
Preference number: 4 (lower is better)
Translates to: TRCLLYTMYRLGRPRPTAGRTWL*CSEGGL
Trigger: TAGACCTCCCTCTGAACACCACAGCCAGGTCCTGCC...AGCCGTGGGGCGCGGGCGGCCGAGCCTATACATAGTGTACAGGAGACATCGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CCCTCACTTGTCCCAGGGAGGAAACTCCGGGGAGGGGGCGCCCTCCAGCTCCACCCATCACATCAGCTCTaGAATATTCAGGCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: PSLVPGRKLRGGGALQLHPSHQL*NIQAPR
Trigger: TCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGG...GTGGAGCTGGAGGGCGCCCCCTCCCCGGAGTTTCCTCCCTGGGACAAGTGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CAGGGAGGCCAGTGGAGAGGATGTGGTCGTGGCCATGTGAGGCTTGGAGCAGGGCCAGTGGAGAGGATGTaGTCGTGGCCATGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: QGGQWRGCGRGHVRLGAGPVERM*SWPCEA
Trigger: AGCCTCACATGGCCACGACCACATCCTCTCCACTGG...CCCTGCTCCAAGCCTCACATGGCCACGACCACATCCTCTCCACTGGCCTCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413737.2
ENST00000626701.1
ENST00000628272.1
CDS-3UTR CCA 90 bp GGAGGCCAGTGGAGAGGATGTGGTCGTGGCCATGTGAGGCTTGGAGCAGGGCGACCAGTGGAGAGGATGTaGTCGTGGCCATGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: GGQWRGCGRGHVRLGAGRPVERM*SWPCEA
Trigger: AGCCTCACATGGCCACGACCACATCCTCTCCACTGG...TCGCCCTGCTCCAAGCCTCACATGGCCACGACCACATCCTCTCCACTGGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413737.2
ENST00000626701.1
ENST00000628272.1
CDS-3UTR CCA 90 bp AGGATGTGGTCGTGGCCATGTGAGGCTTGGAGCAGGGCGATGATGACAGAGGGGAGGCAGGGAGGCCAGTaGAGAGGATGTGGTCGTGGC +
Preference number: 4 (lower is better)
Translates to: RMWSWPCEAWSRAMMTEGRQGGQ*RGCGRG
Trigger: GCCACGACCACATCCTCTCCACTGGCCTCCCTGCCT...CCCCTCTGTCATCATCGCCCTGCTCCAAGCCTCACATGGCCACGACCACATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413737.2
ENST00000626701.1
ENST00000628272.1
CDS-3UTR TCA 90 bp CAAACTGGCACTGAGGAGCTCTGGTCTCTGCGCGGCGGGGCGCCCTCTCCGAATACAGAACAACGGAGCTaGTGTAGACAGCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: QTGTEELWSLRGGAPSPNTEQRS*CRQQRW
Trigger: CCACCTCTGCTGTCTACATCAGCTCCGTTGTTCTGT...ATTCGGAGAGGGCGCCCCGCCGCGCAGAGACCAGAGCTCCTCAGTGCCAGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp TGGCGAGGAGCCATGGGATACGGGGAGCAGGCGACAAGCCGACTGAGGAGAGACTGGAAACGTTCTTGGTaGCCAGCAGGGCTAAGTGGC +
Preference number: 4 (lower is better)
Translates to: WRGAMGYGEQATSRLRRDWKRSW*PAGLSG
Trigger: GCCACTTAGCCCTGCTGGTCACCAAGAACGTTTCCA...GTCTCTCCTCAGTCGGCTTGTCGCCTGCTCCCCGTATCCCATGGCTCCTCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp CAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCAGATGCTCGTGACTCATCTGTaGTACTCTGGATCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: QSTEKAAGSLRRDRSCQMLVTHL*YSGSPA
Trigger: AGCGGGAGATCCAGAGTATCACAGATGAGTCACGAG...CATCTGGCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp AGCAGACAGGCGCTAAGGACAAAGCGCGTGCGACTCCAGCCCTCCCTCAGGCCCTTGCATAAGAGCCGATaGGAAGAGGTTGCTCGCGTC +
Preference number: 4 (lower is better)
Translates to: SRQALRTKRVRLQPSLRPLHKSR*EEVARV
Trigger: GACGCGAGCAACCTCTTCTCATCGGCTCTTATGCAA...GGGCCTGAGGGAGGGCTGGAGTCGCACGCGCTTTGTCCTTAGCGCCTGTCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616202.4
ENST00000616933.4
CDS-3UTR TCA 90 bp TCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCTGTGGTGTTCAGAGGGAAGGCGACAAGCCGACTaGGGAGAGACGCCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: SGIFRPPEGRTWLWCSEGRRQAD*GETPAP
Trigger: GGGAGCAGGCGTCTCTCCTCAGTCGGCTTGTCGCCT...TCCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616202.4
ENST00000616933.4
CDS-3UTR TCA 90 bp TTCTGCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGTACCCCAGCCACACCTaGCGCTGTCTGGGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: FCTAHHISSGIFRPPEGRYPSHT*RCLGGA
Trigger: GGCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTA...CCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGCAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp CAGGGCCCAGGTCGGCTCTCCATTGGCCTTGCCATGGCCAAAGACCTGCAGGAAGCAGGAAGGGCACAATaGCATCCCTCGAGATGGCCT +
Preference number: 4 (lower is better)
Translates to: QGPGRLSIGLAMAKDLQEAGRAQ*HPSRWP
Trigger: AGGCCATCTCGAGGGATGGCATTGTGCCCTTCCTGC...TTCCTGCAGGTCTTTGGCCATGGCAAGGCCAATGGAGAGCCGACCTGGGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR GCA 90 bp ACTGGCAGACCTCCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCTCTCCCAACCTTTATTaGAGCGTCTCCTCCGGCGAG +
Preference number: 4 (lower is better)
Translates to: TGRPPNLPQPHLTLSGWRSPNLY*SVSSGE
Trigger: CTCGCCGGAGGAGACGCTGCAATAAAGGTTGGGAGA...GCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGGAGGTCTGCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp GCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTAGGCGAGACAGGAGCTaGCAGATGGGGACGGGGGAG +
Preference number: 4 (lower is better)
Translates to: AQPITSALEYSGPQKAGPRRDRS*QMGTGE
Trigger: CTCCCCCGTCCCCATCTGGCAGCTCCTGTCTCGCCT...AGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp CCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCCAGCTCCAGCTCGGAACGAGCATGCAGTaGCTGACCCCCTTAGTAATG +
Preference number: 4 (lower is better)
Translates to: PNLPQPHLTLSGWRQLQLGTSMQ*LTPLVM
Trigger: CATTACTAAGGGGGTCAGGCACTGCATGCTCGTTCC...GAGCTGGAGCTGGCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp CTTGTCCCAGGGAGGAAACTCCGGGGAGGGGGCGCCCTCCAGCTCCACAATTTCGATACAGCCCCCTTCTaGACAGCCCATCACATCAGC +
Preference number: 4 (lower is better)
Translates to: LVPGRKLRGGGALQLHNFDTAPF*TAHHIS
Trigger: GCTGATGTGATGGGCTGTGCAGAAGGGGGCTGTATC...GAAATTGTGGAGCTGGAGGGCGCCCCCTCCCCGGAGTTTCCTCCCTGGGACAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp GTCCTAGTTAGAGGAGAGCAGACAGGCGCTAAGGACAAAGCGCGTGCGACTCCATGCCATCACCCGGGTTaGCTCCCCCATCGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: VLVRGEQTGAKDKARATPCHHPG*LPHRRP
Trigger: AGGACGGCGATGGGGGAGCCAACCCGGGTGATGGCA...TGGAGTCGCACGCGCTTTGTCCTTAGCGCCTGTCTGCTCTCCTCTAACTAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp GAAAGCGTGGCCTCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACAGGCCAAGGGACTGCTTTCCTTaGGGTTGCCATCACCCGGGT +
Preference number: 4 (lower is better)
Translates to: ESVASSWVSSAASALHRPRDCFP*GCHHPG
Trigger: ACCCGGGTGATGGCAACCCCAAGGAAAGCAGTCCCT...TGGCCTGTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGAGGCCACGCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
CDS-3UTR CCA 90 bp AACTGGCAGACCTCCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGAGGGACTGCTTTCCTTaGGGTTGCCATCACCCGGGT +
Preference number: 4 (lower is better)
Translates to: NWQTSKPTPATPDAVWVARDCFP*GCHHPG
Trigger: ACCCGGGTGATGGCAACCCCAAGGAAAGCAGTCCCT...CGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGGAGGTCTGCCAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp GGTGTCGAGGGAACGAGGCCACGACCCCCGCCTGGGCCTAAAGCACTTTCGCTCCTGGGCCCAGAGACCTaGAAATCATGTAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: GVEGTRPRPPPGPKALSLLGPET*KSCSRS
Trigger: GCTCCTACTACATGATTTCCAGGTCTCTGGGCCCAG...GAGCGAAAGTGCTTTAGGCCCAGGCGGGGGTCGTGGCCTCGTTCCCTCGACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CAAACTGGCACTGAGGAGCTCTGGTCTCTGCGCGGCGGGGCGCCCTCTCCGAATCTGGGCCCAGAGACCTaGAAATCATGTAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: QTGTEELWSLRGGAPSPNLGPET*KSCSRS
Trigger: GCTCCTACTACATGATTTCCAGGTCTCTGGGCCCAG...ATTCGGAGAGGGCGCCCCGCCGCGCAGAGACCAGAGCTCCTCAGTGCCAGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp AGCAGACAGGCGCTAAGGACAAAGCGCGTGCGACTCCAGCCCTCCCTCAGGCCCCAGACATCAAAGCCATaGCGAGACAGCGTGCGGTTA +
Preference number: 4 (lower is better)
Translates to: SRQALRTKRVRLQPSLRPQTSKP*RDSVRL
Trigger: TAACCGCACGCTGTCTCGCCATGGCTTTGATGTCTG...GGGCCTGAGGGAGGGCTGGAGTCGCACGCGCTTTGTCCTTAGCGCCTGTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616933.4
CDS-3UTR CCA 90 bp TCTTGGTGTGTGGGGGCCCTTCCTCCAGGCGTAAGAGGGCATAGCGAGCCGCACGGCCCCATAGCCGTGTaGTCACCGTCTCATTTCCTT +
Preference number: 4 (lower is better)
Translates to: SWCVGALPPGVRGHSEPHGPIAV*SPSHFL
Trigger: AAGGAAATGAGACGGTGACCACACGGCTATGGGGCC...GTGCGGCTCGCTATGCCCTCTTACGCCTGGAGGAAGGGCCCCCACACACCAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR CCA 90 bp CGTCTCCTCCGGCGAGACGAGGCCGGGCTTAGAAAAAGGGCAGCGAAGACCCAGCCACAATCACGCCCTTaGTCAGGTAGGAGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: RLLRRDEAGLRKRAAKTQPQSRP*SGRSSR
Trigger: TCTGGAGCTCCTACCTGACCAAGGGCGTGATTGTGG...CTGGGTCTTCGCTGCCCTTTTTCTAAGCCCGGCCTCGTCTCGCCGGAGGAGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CTTCCCAAGCCAGCTTGGCACAGACATCAAAGCCATGGCGAGACAGCGTGCGGTCAGAGGTGGTGGCGATaGCCAGGATGGTGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: LPKPAWHRHQSHGETACGQRWWR*PGWCQW
Trigger: CCACTGGCACCATCCTGGCCATCGCCACCACCTCTG...ACCGCACGCTGTCTCGCCATGGCTTTGATGTCTGTGCCAAGCTGGCTTGGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR CCA 90 bp AGGCCGGGCTTAGAAAAAGGGCAGCGAAGACCCAGGGGCCAAACTGGCACTGAGAGACAGCAGAGGTGGTaGCGATGGCCAGGATGGTGC +
Preference number: 4 (lower is better)
Translates to: RPGLEKGQRRPRGQTGTERQQRW*RWPGWC
Trigger: GCACCATCCTGGCCATCGCCACCACCTCTGCTGTCT...CTCAGTGCCAGTTTGGCCCCTGGGTCTTCGCTGCCCTTTTTCTAAGCCCGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp TCTTGGTGTGTGGGGGCCCTTCCTCCAGGCGTAAGAGGGCATAGCGAGCCGCACAGGTCGGCTCTCCATTaGCCTTGCCATGGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: SWCVGALPPGVRGHSEPHRSALH*PCHGQR
Trigger: TCTTTGGCCATGGCAAGGCCAATGGAGAGCCGACCT...GTGCGGCTCGCTATGCCCTCTTACGCCTGGAGGAAGGGCCCCCACACACCAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
CDS-3UTR CCA 90 bp GAAAGCGTGGCCTCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACAGGCCACAGCACCAGCAGCTGTaGCCTCCAGTTCTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: ESVASSWVSSAASALHRPQHQQL*PPVLGV
Trigger: CACACCAAGAACTGGAGGCCACAGCTGCTGGTGCTG...TGGCCTGTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGAGGCCACGCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
CDS-3UTR CCA 90 bp TGGCAGACCTCCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCCACTAAGTGGCCAGCTGTaGTTTCCCGGACCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: WQTSKPTPATPDAVWVAPLSGQL*FPGPAQ
Trigger: TTGAGCTGGTCCGGGAAACCACAGCTGGCCACTTAG...TGGCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGGAGGTCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CTGGGGCTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGAGCTGCTGGGGCAGCTaGGAGCACTCTGATCGTGGA +
Preference number: 4 (lower is better)
Translates to: LGLEVLYPVPDGAGTSMQSCWGS*EHSDRG
Trigger: TCCACGATCAGAGTGCTCCCAGCTGCCCCAGCAGCT...CTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCTGTGGTGTTCAGAGGGGAGGAATGGGCCGCATaGACTACCTGGGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: LWNIQAPRRQDLAVVFRGEEWAA*TTWGSP
Trigger: TGGGGACCCCCAGGTAGTCCATGCGGCCCATTCCTC...CCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp GTCCTAGTTAGAGGAGAGCAGACAGGCGCTAAGGACAAAGCGCGTGCGACTCCACACGGAGAAGGCGGCTaGGTCCCTCAGGCGAGACAG +
Preference number: 4 (lower is better)
Translates to: VLVRGEQTGAKDKARATPHGEGG*VPQARQ
Trigger: CTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTG...TGGAGTCGCACGCGCTTTGTCCTTAGCGCCTGTCTGCTCTCCTCTAACTAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp GGTGCTGGAACGAGCATGCAGTGCCTGACCCCCTTAGTAATGTGCCCTAGGGGAGGGCCAAGGATGAGCTaGGGAAGCCAAAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GAGTSMQCLTPLVMCPRGGPRMS*GSQRPW
Trigger: CCAGGGCCTTTGGCTTCCCCAGCTCATCCTTGGCCC...TCCCCTAGGGCACATTACTAAGGGGGTCAGGCACTGCATGCTCGTTCCAGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp ACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCGCCTCAGACCAGGCTaGTGGAGCGGAAGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: TAHHISSGIFRPPEGRTWRLRPG*WSGRAK
Trigger: CTTGGCCCTTCCGCTCCACCAGCCTGGTCTGAGGCG...CCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp ACTGGCAGACCTCCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCAGTCCCAGATGGTGCTaGAACGAGCATGCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: TGRPPNLPQPHLTLSGWRSPRWC*NEHAVP
Trigger: AGGCACTGCATGCTCGTTCCAGCACCATCTGGGACT...GCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGGAGGTCTGCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp GGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCTCTCGCAGGTCAGGGCCCTaGGGCTGGAGGTACTGTACC +
Preference number: 4 (lower is better)
Translates to: GLKGKEVVRSGLLSGASSRRSGP*GWRYCT
Trigger: GGTACAGTACCTCCAGCCCCAGGGCCCTGACCTGCG...AGAGCTGGCGCCACTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp GGTGTCGAGGGAACGAGGCCACGACCCCCGCCTGGGCCTAAAGCACTTTCGCTCGCTCCAGCTCTGCCTTaGGCTCAAAGGAAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: GVEGTRPRPPPGPKALSLAPALP*AQRKRG
Trigger: ACCTCTTTTCCTTTGAGCCCAAGGCAGAGCTGGAGC...GAGCGAAAGTGCTTTAGGCCCAGGCGGGGGTCGTGGCCTCGTTCCCTCGACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCCAGCTCCAGCTCGCTCCAGCTCTGCCTTaGGCTCAAAGGAAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: PNLPQPHLTLSGWRQLQLAPALP*AQRKRG
Trigger: ACCTCTTTTCCTTTGAGCCCAAGGCAGAGCTGGAGC...GAGCTGGAGCTGGCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp CCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCCAGCTCCAGCTCGGGACTTGGTGTAACTaGCAGACCTCCAAACCTACC +
Preference number: 4 (lower is better)
Translates to: PNLPQPHLTLSGWRQLQLGTWCN*QTSKPT
Trigger: GGTAGGTTTGGAGGTCTGCCAGTTACACCAAGTCCC...GAGCTGGAGCTGGCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp CCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCCAGCTCCAGCTCATCTCAGAGGGGACTTaGTGTAACTGGCAGACCTCC +
Preference number: 4 (lower is better)
Translates to: PNLPQPHLTLSGWRQLQLISEGT*CNWQTS
Trigger: GGAGGTCTGCCAGTTACACCAAGTCCCCTCTGAGAT...GAGCTGGAGCTGGCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp ACTGGCAGACCTCCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCAAGGATGCAGGGGGCTaGTGTCTAACACCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: TGRPPNLPQPHLTLSGWRKDAGG*CLTPPA
Trigger: AGCTGGAGGTGTTAGACACCAGCCCCCTGCATCCTT...GCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGGAGGTCTGCCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp GGAGGCCAGTGGAGAGGATGTGGTCGTGGCCATGTGAGGCTTGGAGCAGGGCGATGGCCATGTGAGGCTTaGAGCAGGGCGATGATGACA +
Preference number: 4 (lower is better)
Translates to: GGQWRGCGRGHVRLGAGRWPCEA*SRAMMT
Trigger: TGTCATCATCGCCCTGCTCCAAGCCTCACATGGCCA...TCGCCCTGCTCCAAGCCTCACATGGCCACGACCACATCCTCTCCACTGGCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413737.2
ENST00000626701.1
ENST00000628272.1
CDS-3UTR CCA 90 bp AGGATGTGGTCGTGGCCATGTGAGGCTTGGAGCAGGGCGATGATGACAGAGGGGTCCTCCTCCCCTCGCTaGGGCCACTACAAGCCGATT +
Preference number: 4 (lower is better)
Translates to: RMWSWPCEAWSRAMMTEGSSSPR*GHYKPI
Trigger: AATCGGCTTGTAGTGGCCCCAGCGAGGGGAGGAGGA...CCCCTCTGTCATCATCGCCCTGCTCCAAGCCTCACATGGCCACGACCACATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626701.1
3UTR CAA 72 bp GCCGTCTCTTCTGGGACGTTCAGGCGGAGCCGCGTGTaGGCTGGATTCTTTCTCCGGATTGAGCCTCGTGAC +
Preference number: 4 (lower is better)
Translates to: AVSSGTFRRSRV*AGFFLRIEPRD
Trigger: GTCACGAGGCTCAATCCGGAGAAAGAATCCAGCCAACACGCGGCTCCGCCTGAACGTCCCAGAAGAGACGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR TCA 90 bp TTACTCAGTGGCGCCAGCTCTGGGAGGTGCGTGAGATGTCAAGCTAGGTGCGCAGCTCTGGGAGGTGCGTaGGATGTCAAGCTAGGTGCG +
Preference number: 4 (lower is better)
Translates to: LLSGASSGRCVRCQARCAALGGA*DVKLGA
Trigger: CGCACCTAGCTTGACATCTCACGCACCTCCCAGAGC...TGCGCACCTAGCTTGACATCTCACGCACCTCCCAGAGCTGGCGCCACTGAGTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR TCA 90 bp AGTCCCCTGATCGAATCTCAGAGGGGACTTGGTGTAACTGGCAGACCTCCAAACTACCCCAGCCACACCTaGCGCTGTCTGGGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: SPLIESQRGLGVTGRPPNYPSHT*RCLGGA
Trigger: GGCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTA...GTTTGGAGGTCTGCCAGTTACACCAAGTCCCCTCTGAGATTCGATCAGGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR TCA 90 bp AGGATGTGGTCGTGGCCATGTGAGGCTTGGAGCAGGGCGATGATGACAGAGGGGCTGATGAGTGCCCCCTaGGGGGAGACTTTGACGTCT +
Preference number: 4 (lower is better)
Translates to: RMWSWPCEAWSRAMMTEGLMSAP*GETLTS
Trigger: AGACGTCAAAGTCTCCCCTCAGGGGGCACTCATCAG...CCCCTCTGTCATCATCGCCCTGCTCCAAGCCTCACATGGCCACGACCACATCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000626701.1
CDS-3UTR GCA 90 bp ATCGAAAGCGTGGCCTCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACAGGTGCTTTCCTTGGGGTTaGCATCACCCGGGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: IESVASSWVSSAASALHRCFPWG*HHPGWL
Trigger: GAGCCAACCCGGGTGATGGCAACCCCAAGGAAAGCA...CCTGTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGAGGCCACGCTTTCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
CDS-3UTR GCA 90 bp TTTCCGCGCCTTCTCCCAACCTTTATTGCAGCGTCTCCTCCGGCGAGACGAGGCTGCTTTCCTTGGGGTTaGCATCACCCGGGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: FPRLLPTFIAASPPARRGCFPWG*HHPGWL
Trigger: GAGCCAACCCGGGTGATGGCAACCCCAAGGAAAGCA...GCCTCGTCTCGCCGGAGGAGACGCTGCAATAAAGGTTGGGAGAAGGCGCGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp CGTCTCCTCCGGCGAGACGAGGCCGGGCTTAGAAAAAGGGCAGCGAAGACCCAGCACCTCGTCGAGGGATaGAATGAGGATGCCAATCTC +
Preference number: 4 (lower is better)
Translates to: RLLRRDEAGLRKRAAKTQHLVEG*NEDANL
Trigger: GAGATTGGCATCCTCATTGCATCCCTCGACGAGGTG...CTGGGTCTTCGCTGCCCTTTTTCTAAGCCCGGCCTCGTCTCGCCGGAGGAGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp CAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCAGATGGATTTTCCAGAAAGGTaGCCTCAAGGACAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: QSTEKAAGSLRRDRSCQMDFPER*PQGQSP
Trigger: TGGGCTCTGTCCTTGAGGGCACCTTTCTGGAAAATC...CATCTGGCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp ATCGAAAGCGTGGCCTCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACAGGATCACCCGGTCCAGGTaGTCTGTGAGGACCTCGAGA +
Preference number: 4 (lower is better)
Translates to: IESVASSWVSSAASALHRITRSR*SVRTSR
Trigger: TCTCGAGGTCCTCACAGAGCACCTGGACCGGGTGAT...CCTGTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGAGGCCACGCTTTCGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR GCA 90 bp TTCTGCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGAGGCGAGACAGGAGCTaGCAGATGGGGACGGGGGAG +
Preference number: 4 (lower is better)
Translates to: FCTAHHISSGIFRPPEGRRRDRS*QMGTGE
Trigger: CTCCCCCGTCCCCATCTGGCAGCTCCTGTCTCGCCT...CCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGCAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp AGGCCGGGCTTAGAAAAAGGGCAGCGAAGACCCAGGGGCCAAACTGGCACTGAGCCCAGTCCCAGATGGTaGTGGAACGAGCATGCAGTG +
Preference number: 4 (lower is better)
Translates to: RPGLEKGQRRPRGQTGTEPSPRW*WNEHAV
Trigger: CACTGCATGCTCGTTCCAGCACCATCTGGGACTGGG...CTCAGTGCCAGTTTGGCCCCTGGGTCTTCGCTGCCCTTTTTCTAAGCCCGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp CTGGGGCTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGCCCAGTCCCAGATGGTaGTGGAACGAGCATGCAGTG +
Preference number: 4 (lower is better)
Translates to: LGLEVLYPVPDGAGTSMQPSPRW*WNEHAV
Trigger: CACTGCATGCTCGTTCCAGCACCATCTGGGACTGGG...CTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAGCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp CTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCTGTGGTGTTCAGAGGGAGATGTCAAGCTAGGTaGGCAGGTCAGGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LWNIQAPRRQDLAVVFRGRCQAR*AGQGPG
Trigger: CCCAGGGCCCTGACCTGCGCACCTAGCTTGACATCT...CCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp ACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGTCAGGTTGTTTAGCATaGTGGCGGCGCGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: TAHHISSGIFRPPEGRTWSGCLA*WRRGPW
Trigger: CCAGGGGCCGCGCCGCCACCATGCTAAACAACCTGA...CCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp TCCCCTATCCTGGCCCCAACTTGCATAAGAGCCGATGAGAAGAGGTTGCTCGCGTCAGGTTGTTTAGCATaGTGGCGGCGCGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: SPILAPTCIRADEKRLLASGCLA*WRRGPW
Trigger: CCAGGGGCCGCGCCGCCACCATGCTAAACAACCTGA...CGCGAGCAACCTCTTCTCATCGGCTCTTATGCAAGTTGGGGCCAGGATAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp TTTCCGCGCCTTCTCCCAACCTTTATTGCAGCGTCTCCTCCGGCGAGACGAGGCAGGGACTGCTTTCCTTaGGGTTGCCATCACCCGGGT +
Preference number: 4 (lower is better)
Translates to: FPRLLPTFIAASPPARRGRDCFP*GCHHPG
Trigger: ACCCGGGTGATGGCAACCCCAAGGAAAGCAGTCCCT...GCCTCGTCTCGCCGGAGGAGACGCTGCAATAAAGGTTGGGAGAAGGCGCGGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp GGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCTCTGAAGGTGCCCATGCGTaGGGCCTGCACCGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GLKGKEVVRSGLLSGASSEGAHA*GLHRLL
Trigger: AAGAAGCCGGTGCAGGCCCCACGCATGGGCACCTTC...AGAGCTGGCGCCACTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp AACTGGCAGACCTCCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGGAAGATGGCCATGGCTaGGAAGAGGTAAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: NWQTSKPTPATPDAVWVAEDGHG*EEVSQQ
Trigger: CTGCTGGCTTACCTCTTCCCAGCCATGGCCATCTTC...CGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGGAGGTCTGCCAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616201.4
CDS-3UTR CCA 90 bp GGTGTCGAGGGAACGAGGCCACGACCCCCGCCTGGGCCTAAAGCACTTTCGCTCGCACCAGGGATGCCCTaGATCTCTGTGACATTGTTT +
Preference number: 4 (lower is better)
Translates to: GVEGTRPRPPPGPKALSLAPGMP*ISVTLF
Trigger: AAACAATGTCACAGAGATCCAGGGCATCCCTGGTGC...GAGCGAAAGTGCTTTAGGCCCAGGCGGGGGTCGTGGCCTCGTTCCCTCGACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCAGATGGATGACAATTACCCATaGAGATGGCCAGGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: QSTEKAAGSLRRDRSCQMDDNYP*RWPGQS
Trigger: ACTCTGGCCTGGCCATCTCCATGGGTAATTGTCATC...CATCTGGCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGTGCCTGAGCGTGGCCTCCAGTTaGGTGTCCTCAGCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: LEVLYPVPDGAGTSMQCLSVASS*VSSAAS
Trigger: AGACGCTGCTGAGGACACCCAACTGGAGGCCACGCT...CAGGCACTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp ACTGGCAGACCTCCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCTGCCCGCTGGGCCTGTaGATGATTTTCCAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: TGRPPNLPQPHLTLSGWRCPLGL*MIFQKG
Trigger: ACCTTTCTGGAAAATCATCCACAGGCCCAGCGGGCA...GCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGGAGGTCTGCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGTGCCTGTTTGGCGAGGAGCCATaGGATACGGGGAGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: LEVLYPVPDGAGTSMQCLFGEEP*DTGSRR
Trigger: TCGCCTGCTCCCCGTATCCCATGGCTCCTCGCCAAA...CAGGCACTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp TCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCTGTGGTGTTCAGAGGGATCTGGGGCCTCTCAGTaGGTCCGGCCCCTAAACCAG +
Preference number: 4 (lower is better)
Translates to: SGIFRPPEGRTWLWCSEGSGASQ*VRPLNQ
Trigger: CTGGTTTAGGGGCCGGACCCACTGAGAGGCCCCAGA...TCCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp CTTGGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCTCTGGGGCCTCTCAGTaGGTCCGGCCCCTAAACCAG +
Preference number: 4 (lower is better)
Translates to: LGLKGKEVVRSGLLSGASSGASQ*VRPLNQ
Trigger: CTGGTTTAGGGGCCGGACCCACTGAGAGGCCCCAGA...GCTGGCGCCACTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp GTCCTAGTTAGAGGAGAGCAGACAGGCGCTAAGGACAAAGCGCGTGCGACTCCAGGGCCAAGGATGAGCTaGGGAAGCCAAAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: VLVRGEQTGAKDKARATPGPRMS*GSQRPW
Trigger: CCAGGGCCTTTGGCTTCCCCAGCTCATCCTTGGCCC...TGGAGTCGCACGCGCTTTGTCCTTAGCGCCTGTCTGCTCTCCTCTAACTAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp AGGGCCCTGGGGCTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCGGGACTTGGTGTAACTaGCAGACCTCCAAACCTACC +
Preference number: 4 (lower is better)
Translates to: RALGLEVLYPVPDGAGTSGTWCN*QTSKPT
Trigger: GGTAGGTTTGGAGGTCTGCCAGTTACACCAAGTCCC...GCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAGCCCCAGGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp CTGGGGCTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGCCAGAAGGCAGGACCTaGCTGTGGTGTTCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: LGLEVLYPVPDGAGTSMQPEGRT*LWCSEG
Trigger: TCCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGG...CTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAGCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp TTTCCGCGCCTTCTCCCAACCTTTATTGCAGCGTCTCCTCCGGCGAGACGAGGCGGTAAGCCAGCTACTTaGGAGGCTGAACTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: FPRLLPTFIAASPPARRGGKPAT*EAELVG
Trigger: CCCCACCAGTTCAGCCTCCCAAGTAGCTGGCTTACC...GCCTCGTCTCGCCGGAGGAGACGCTGCAATAAAGGTTGGGAGAAGGCGCGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR CCA 90 bp AGCAGACAGGCGCTAAGGACAAAGCGCGTGCGACTCCAGCCCTCCCTCAGGCCCAGGAGCCATGGGATATaGGGATTGACTTCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: SRQALRTKRVRLQPSLRPRSHGI*GLTSGH
Trigger: ATGCCCAGAAGTCAATCCCCATATCCCATGGCTCCT...GGGCCTGAGGGAGGGCTGGAGTCGCACGCGCTTTGTCCTTAGCGCCTGTCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616201.4
3UTR CAA 72 bp CTGGCCCCAACTTGCATAAGAGCCGATGAGAAGAGGTaGCTCGCGTCTCTGCAGCCGCAGTGGAAGCTCACG +
Preference number: 4 (lower is better)
Translates to: LAPTCIRADEKR*LASLQPQWKLT
Trigger: CGTGAGCTTCCACTGCGGCTGCAGAGACGCGAGCAACCTCTTCTCATCGGCTCTTATGCAAGTTGGGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp CTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGTGCCTGCATCACAGGTGGCGTTaGGGAAGCGAGAGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LEVLYPVPDGAGTSMQCLHHRWR*GSERSR
Trigger: TCTGCTCCTCTCGCTTCCTCAACGCCACCTGTGATG...CAGGCACTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616933.4
CDS-3UTR TCA 90 bp GTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCTCTGGGAGGTGCGTGAGATGTCGTCGAGGGATGCAATaGGGATGCCAATCTCGCAGA +
Preference number: 4 (lower is better)
Translates to: VVRSGLLSGASSGRCVRCRRGMQ*GCQSRR
Trigger: TCTGCGAGATTGGCATCCTCATTGCATCCCTCGACG...ACATCTCACGCACCTCCCAGAGCTGGCGCCACTGAGTAATCCGGACCTCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp CTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCTGTGGTGTTCAGAGGGCATAGCGAGCCGCACTaGGAGACAGACCTCGTATCC +
Preference number: 4 (lower is better)
Translates to: LWNIQAPRRQDLAVVFRGHSEPH*ETDLVS
Trigger: GGATACGAGGTCTGTCTCTCAGTGCGGCTCGCTATG...CCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp CTTGGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCCAGCTGGGAGCACTCTaGTCGTGGATCAGCTGCACC +
Preference number: 4 (lower is better)
Translates to: LGLKGKEVVRSGLLSGASQLGAL*SWISCT
Trigger: GGTGCAGCTGATCCACGATCAGAGTGCTCCCAGCTG...GCTGGCGCCACTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp GGGAGGCGAATCCAGGAAAAGTTGGACCCTTGTCTCACCTCATCTCGGAAAAGGAGGCGACAAGCCGACTaGGGAGAGACGCCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: GRRIQEKLDPCLTSSRKRRRQAD*GETPAP
Trigger: GGGAGCAGGCGTCTCTCCTCAGTCGGCTTGTCGCCT...CCTTTTCCGAGATGAGGTGAGACAAGGGTCCAACTTTTCCTGGATTCGCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp CCAGTGGAGAGGATGTGGTCGTGGCCATGTGAGGCTTGGAGCAGGGCGATGATGCAGTTGGATTTGCTTTaGCGTCTTCCCCCGGGAGGT +
Preference number: 4 (lower is better)
Translates to: PVERMWSWPCEAWSRAMMQLDLL*RLPPGG
Trigger: ACCTCCCGGGGGAAGACGTCAAAGCAAATCCAACTG...CATCATCGCCCTGCTCCAAGCCTCACATGGCCACGACCACATCCTCTCCACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628272.1
CDS-3UTR GCA 90 bp GGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGTGCCTGACTGCCAATCTCGCAGATaGAGGCAGTCAGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: GGTVPSPRWCWNEHAVPDCQSRR*RQSGAG
Trigger: CCCTGCTCCTGACTGCCTGCATCTGCGAGATTGGCA...GTCAGGCACTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp TTACTCAGTGGCGCCAGCTCTGGGAGGTGCGTGAGATGTCAAGCTAGGTGCGCAGTCCTCAGCAGCGTCTaGACTGCACAGGCCAGATTC +
Preference number: 4 (lower is better)
Translates to: LLSGASSGRCVRCQARCAVLSSV*TAQARF
Trigger: GAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGAC...TGCGCACCTAGCTTGACATCTCACGCACCTCCCAGAGCTGGCGCCACTGAGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp CTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGTGCCTGGAGAGCAGCTGGGGGTaGACCACATTCTGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: LEVLYPVPDGAGTSMQCLESSWG*TTFWSW
Trigger: CCAAGACCAGAATGTGGTGCACCCCCAGCTGCTCTC...CAGGCACTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp GGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGTGCCTGACGAGAGCAGCTGGGGGTaGACCACATTCTGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: GGTVPSPRWCWNEHAVPDESSWG*TTFWSW
Trigger: CCAAGACCAGAATGTGGTGCACCCCCAGCTGCTCTC...GTCAGGCACTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp TTCTGCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGCCTTCTGGCGCCAGTTaGGGGGCCAGCCAACAAGCA +
Preference number: 4 (lower is better)
Translates to: FCTAHHISSGIFRPPEGRPSGAS*GASQQA
Trigger: TGCTTGTTGGCTGGCCCCGCAACTGGCGCCAGAAGG...CCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGCAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp CCGCAGTGGAAGCTCACGTCCGCTGGGAGGCGAATCCAGGAAAAGTTGGACCCTTCCACCAAACGTCGATaGTGCCCTCAGAGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: PQWKLTSAGRRIQEKLDPSTKRR*CPQRSA
Trigger: AGCGCTTCTCTGAGGGCAGCATCGACGTTTGGTGGA...AGGGTCCAACTTTTCCTGGATTCGCCTCCCAGCGGACGTGAGCTTCCACTGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp AACTGGCAGACCTCCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGTTGGTCCAGGTGAGATaGACCTTCTCCGGATCTGTC +
Preference number: 4 (lower is better)
Translates to: NWQTSKPTPATPDAVWVALVQVR*TFSGSV
Trigger: GACAGATCCGGAGAAGGTGCATCTCACCTGGACCAA...CGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGGAGGTCTGCCAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp ACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCCGATGAGAAGAGGTTaGTCGCGTCTCTGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: TAHHISSGIFRPPEGRTWPMRRG*SRLCSR
Trigger: GCGGCTGCAGAGACGCGAGCAACCTCTTCTCATCGG...CCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp ACTGGCAGACCTCCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCATCCTGGCCCCAACTTaGATAAGAGCCGATGAGAAG +
Preference number: 4 (lower is better)
Translates to: TGRPPNLPQPHLTLSGWRILAPT*IRADEK
Trigger: CTTCTCATCGGCTCTTATGCAAGTTGGGGCCAGGAT...GCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGGAGGTCTGCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp GTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCTCTGGGAGGTGCGTGAGATGTACCCCCTTAGTAATGTaGCCTAGGGGAAGGGAACCC +
Preference number: 4 (lower is better)
Translates to: VVRSGLLSGASSGRCVRCTPLVM*PRGREP
Trigger: GGGTTCCCTTCCCCTAGGGCACATTACTAAGGGGGT...ACATCTCACGCACCTCCCAGAGCTGGCGCCACTGAGTAATCCGGACCTCACCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp CTGGGGCTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGACCCCCTTAGTAATGTaGCCTAGGGGAAGGGAACCC +
Preference number: 4 (lower is better)
Translates to: LGLEVLYPVPDGAGTSMQTPLVM*PRGREP
Trigger: GGGTTCCCTTCCCCTAGGGCACATTACTAAGGGGGT...CTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAGCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp GCCTTCAGCTGGGAGGTCAGTGAGAGCAGCTGGGGGTGCACCACATTCTGGTCTGATACAGCCCCCTTCTaGACAGCCCATCACATCAGC +
Preference number: 4 (lower is better)
Translates to: AFSWEVSESSWGCTTFWSDTAPF*TAHHIS
Trigger: GCTGATGTGATGGGCTGTGCAGAAGGGGGCTGTATC...AGACCAGAATGTGGTGCACCCCCAGCTGCTCTCACTGACCTCCCAGCTGAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR CCA 90 bp CGTCTCATTTCCTTCCCAAGCCAGCTTGGCACAGACATCAAAGCCATGGCGAGATGCCATCACCCGGGTTaGCTCCCCCATCGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: RLISFPSQLGTDIKAMARCHHPG*LPHRRP
Trigger: AGGACGGCGATGGGGGAGCCAACCCGGGTGATGGCA...TCTCGCCATGGCTTTGATGTCTGTGCCAAGCTGGCTTGGGAAGGAAATGAGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR CCA 90 bp TCCCCTATCCTGGCCCCAACTTGCATAAGAGCCGATGAGAAGAGGTTGCTCGCGAGACAGCAGAGGTGGTaGCGATGGCCAGGATGGTGC +
Preference number: 4 (lower is better)
Translates to: SPILAPTCIRADEKRLLARQQRW*RWPGWC
Trigger: GCACCATCCTGGCCATCGCCACCACCTCTGCTGTCT...CGCGAGCAACCTCTTCTCATCGGCTCTTATGCAAGTTGGGGCCAGGATAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCTGTGGTGTTCAGAGGGTGTAGACAGCAGAGGTaGTGGCGATGGCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: LWNIQAPRRQDLAVVFRGCRQQR*WRWPGW
Trigger: CCATCCTGGCCATCGCCACCACCTCTGCTGTCTACA...CCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGTGCCTGGGGTGCACCACATTCTaGTCTTGGTCCACACGCACC +
Preference number: 4 (lower is better)
Translates to: LEVLYPVPDGAGTSMQCLGCTTF*SWSTRT
Trigger: GGTGCGTGTGGACCAAGACCAGAATGTGGTGCACCC...CAGGCACTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp AATATCGAAAGCGTGGCCTCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACGGCGGAGCCGCGTGTTaGCTGGATTCTTTCTCCGGA +
Preference number: 4 (lower is better)
Translates to: NIESVASSWVSSAASALHGGAAC*LDSFSG
Trigger: TCCGGAGAAAGAATCCAGCCAACACGCGGCTCCGCC...GTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGAGGCCACGCTTTCGATATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR CCA 90 bp TCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACAAACAGAGGAATGGGCCGCATaGACTACCTGGGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: SSWVSSAASALHRPDSQTEEWAA*TTWGSP
Trigger: TGGGGACCCCCAGGTAGTCCATGCGGCCCATTCCTC...TGTTTGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR CCA 90 bp AGGCCGGGCTTAGAAAAAGGGCAGCGAAGACCCAGGGGCCAAACTGGCACTGAGATCTCGGAAAAGGACTaGAGAGGAGGGTGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: RPGLEKGQRRPRGQTGTEISEKD*RGGWEA
Trigger: GGCTTCCCACCCTCCTCTCCAGTCCTTTTCCGAGAT...CTCAGTGCCAGTTTGGCCCCTGGGTCTTCGCTGCCCTTTTTCTAAGCCCGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp GGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCTCTTTTGGCGAGGAGCCATaGGATACGGGGAGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: GLKGKEVVRSGLLSGASSFGEEP*DTGSRR
Trigger: TCGCCTGCTCCCCGTATCCCATGGCTCCTCGCCAAA...AGAGCTGGCGCCACTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp ACTTGCATAAGAGCCGATGAGAAGAGGTTGCTCGCGTCTCTGCAGCCGCAGTGGCTCAGACCAGGCTGGTaGAGCGGAAGGGCCAAGGAT +
Preference number: 4 (lower is better)
Translates to: TCIRADEKRLLASLQPQWLRPGW*SGRAKD
Trigger: ATCCTTGGCCCTTCCGCTCCACCAGCCTGGTCTGAG...CCACTGCGGCTGCAGAGACGCGAGCAACCTCTTCTCATCGGCTCTTATGCAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp GCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTCTCAGACCAGGCTGGTaGAGCGGAAGGGCCAAGGAT +
Preference number: 4 (lower is better)
Translates to: AQPITSALEYSGPQKAGPLRPGW*SGRAKD
Trigger: ATCCTTGGCCCTTCCGCTCCACCAGCCTGGTCTGAG...AGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp AGTCCCCTGATCGAATCTCAGAGGGGACTTGGTGTAACTGGCAGACCTCCAAACCGCCTCAGACCAGGCTaGTGGAGCGGAAGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: SPLIESQRGLGVTGRPPNRLRPG*WSGRAK
Trigger: CTTGGCCCTTCCGCTCCACCAGCCTGGTCTGAGGCG...GTTTGGAGGTCTGCCAGTTACACCAAGTCCCCTCTGAGATTCGATCAGGGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp CTGGGGCTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGAGTCCCAGATGGTGCTaGAACGAGCATGCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: LGLEVLYPVPDGAGTSMQSPRWC*NEHAVP
Trigger: AGGCACTGCATGCTCGTTCCAGCACCATCTGGGACT...CTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAGCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp AACTGGCAGACCTCCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGATCTCAGAGGGGACTTaGTGTAACTGGCAGACCTCC +
Preference number: 4 (lower is better)
Translates to: NWQTSKPTPATPDAVWVAISEGT*CNWQTS
Trigger: GGAGGTCTGCCAGTTACACCAAGTCCCCTCTGAGAT...CGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGGAGGTCTGCCAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp ATCGAAAGCGTGGCCTCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACAGGAAGGATGCAGGGGGCTaGTGTCTAACACCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: IESVASSWVSSAASALHRKDAGG*CLTPPA
Trigger: AGCTGGAGGTGTTAGACACCAGCCCCCTGCATCCTT...CCTGTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGAGGCCACGCTTTCGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR CCA 90 bp CTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGTGCCTGCCAGAAGGCAGGACCTaGCTGTGGTGTTCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: LEVLYPVPDGAGTSMQCLPEGRT*LWCSEG
Trigger: TCCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGG...CAGGCACTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp AGGGCCCTGGGGCTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCGCCAACCAGACAATCTaGGCCCAGATAGTGCAACTT +
Preference number: 4 (lower is better)
Translates to: RALGLEVLYPVPDGAGTSANQTI*AQIVQL
Trigger: AAGTTGCACTATCTGGGCCCAGATTGTCTGGTTGGC...GCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAGCCCCAGGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp ACTGGCAGACCTCCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCGCCAACCAGACAATCTaGGCCCAGATAGTGCAACTT +
Preference number: 4 (lower is better)
Translates to: TGRPPNLPQPHLTLSGWRANQTI*AQIVQL
Trigger: AAGTTGCACTATCTGGGCCCAGATTGTCTGGTTGGC...GCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGGAGGTCTGCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp CCAGTGGAGAGGATGTGGTCGTGGCCATGTGAGGCTTGGAGCAGGGCGATGATGTGGCCATGTGAGGCTTaGAGCAGGGCGATGATGACA +
Preference number: 4 (lower is better)
Translates to: PVERMWSWPCEAWSRAMMWPCEA*SRAMMT
Trigger: TGTCATCATCGCCCTGCTCCAAGCCTCACATGGCCA...CATCATCGCCCTGCTCCAAGCCTCACATGGCCACGACCACATCCTCTCCACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413737.2
ENST00000626701.1
ENST00000628272.1
CDS-3UTR CCA 90 bp AGGATGTGGTCGTGGCCATGTGAGGCTTGGAGCAGGGCGATGATGACAGAGGGGTGGCCATGTGAGGCTTaGAGCAGGGCGATGATGACA +
Preference number: 4 (lower is better)
Translates to: RMWSWPCEAWSRAMMTEGWPCEA*SRAMMT
Trigger: TGTCATCATCGCCCTGCTCCAAGCCTCACATGGCCA...CCCCTCTGTCATCATCGCCCTGCTCCAAGCCTCACATGGCCACGACCACATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413737.2
ENST00000626701.1
ENST00000628272.1
CDS-3UTR TCA 90 bp AATATCGAAAGCGTGGCCTCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACTCATGGAGATGGCCGTaGGCATCGTACAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: NIESVASSWVSSAASALHSWRWP*ASYRSS
Trigger: GCTGCTCCTGTACGATGCTCACGGCCATCTCCATGA...GTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGAGGCCACGCTTTCGATATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
CDS-3UTR TCA 90 bp CCGCAGTGGAAGCTCACGTCCGCTGGGAGGCGAATCCAGGAAAAGTTGGACCCTTGCCAACCAGCAGGGTaGAGTAGGAGGTCATATCAC +
Preference number: 4 (lower is better)
Translates to: PQWKLTSAGRRIQEKLDPCQPAG*SRRSYH
Trigger: GTGATATGACCTCCTACTTCACCCTGCTGGTTGGCA...AGGGTCCAACTTTTCCTGGATTCGCCTCCCAGCGGACGTGAGCTTCCACTGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp CCAGCTCTGCCTTGGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGGGTGCCAGTGGGGATTaGCTTCTGGGCATCCCTCAG +
Preference number: 4 (lower is better)
Translates to: PALPWAQRKRGGEVRITQGASGD*LLGIPQ
Trigger: CTGAGGGATGCCCAGAAGTCAATCCCCACTGGCACC...CTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAGGCAGAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp GCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTCATAGCGAGCCGCACTaGGAGACAGACCTCGTATCC +
Preference number: 4 (lower is better)
Translates to: AQPITSALEYSGPQKAGPHSEPH*ETDLVS
Trigger: GGATACGAGGTCTGTCTCTCAGTGCGGCTCGCTATG...AGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp AGGGCCCTGGGGCTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCCTCATAGGTGTAAGCTaGGATGTCGCTCTCATGCAT +
Preference number: 4 (lower is better)
Translates to: RALGLEVLYPVPDGAGTSLIGVS*DVALMH
Trigger: ATGCATGAGAGCGACATCTCAGCTTACACCTATGAG...GCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAGCCCCAGGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp TCTACTGAAGGATGCAGGGGGCTGGTGTCTAACACCTCCAGCTTCCTGATTGAGGGGCCAAACTGGCACTaGGGAGCTCTGGTCTCTGCG +
Preference number: 4 (lower is better)
Translates to: STEGCRGLVSNTSSFLIEGPNWH*GALVSA
Trigger: CGCAGAGACCAGAGCTCCTCAGTGCCAGTTTGGCCC...CTCAATCAGGAAGCTGGAGGTGTTAGACACCAGCCCCCTGCATCCTTCAGTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp GCCCCCAGCGGGAGAGCTCGACTATGGCGAGAAGTCTGTTGCGCTTCTAGTCACTTGCATAAGAGCCGATaGGAAGAGGTTGCTCGCGTC +
Preference number: 4 (lower is better)
Translates to: APSGRARLWREVCCASSHLHKSR*EEVARV
Trigger: GACGCGAGCAACCTCTTCTCATCGGCTCTTATGCAA...GTGACTAGAAGCGCAACAGACTTCTCGCCATAGTCGAGCTCTCCCGCTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp CTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGTGCCTGTCGGTTTCTTCCTCTTaGGGAGCACCCCTCCCCTAT +
Preference number: 4 (lower is better)
Translates to: LEVLYPVPDGAGTSMQCLSVSSS*GAPLPY
Trigger: ATAGGGGAGGGGTGCTCCTCAAGAGGAAGAAACCGA...CAGGCACTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp TCTTGGTGTGTGGGGGCCCTTCCTCCAGGCGTAAGAGGGCATAGCGAGCCGCACACCATTCGTTGCAATTaGACTCATGGAGATGGCCGT +
Preference number: 4 (lower is better)
Translates to: SWCVGALPPGVRGHSEPHTIRCN*THGDGR
Trigger: ACGGCCATCTCCATGAGTGCAATTGCAACGAATGGT...GTGCGGCTCGCTATGCCCTCTTACGCCTGGAGGAAGGGCCCCCACACACCAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
CDS-3UTR GCA 90 bp ACTGGCAGACCTCCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCACCATTCGTTGCAATTaGACTCATGGAGATGGCCGT +
Preference number: 4 (lower is better)
Translates to: TGRPPNLPQPHLTLSGWRTIRCN*THGDGR
Trigger: ACGGCCATCTCCATGAGTGCAATTGCAACGAATGGT...GCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGGAGGTCTGCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp TTACTCAGTGGCGCCAGCTCTGGGAGGTGCGTGAGATGTCAAGCTAGGTGCGCACCCACTGGCATCTTCTaGCTTGAAGATGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: LLSGASSGRCVRCQARCAPTGIF*LEDGHG
Trigger: GCCATGGCCATCTTCAAGGCAGAAGATGCCAGTGGG...TGCGCACCTAGCTTGACATCTCACGCACCTCCCAGAGCTGGCGCCACTGAGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616933.4
CDS-3UTR GCA 90 bp CTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCTGTGGTGTTCAGAGGGTGCCCACCACGAGGTTaGCATTCACAGCTTCGCCAA +
Preference number: 4 (lower is better)
Translates to: LWNIQAPRRQDLAVVFRGCPPRG*HSQLRQ
Trigger: TTGGCGAAGCTGTGAATGGCAACCTCGTGGTGGGCA...CCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp AATATCGAAAGCGTGGCCTCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACTGCCAATCTCGCAGATaGAGGCAGTCAGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: NIESVASSWVSSAASALHCQSRR*RQSGAG
Trigger: CCCTGCTCCTGACTGCCTGCATCTGCGAGATTGGCA...GTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGAGGCCACGCTTTCGATATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
CDS-3UTR GCA 90 bp GCCCCCAGCGGGAGAGCTCGACTATGGCGAGAAGTCTGTTGCGCTTCTAGTCACCAGCAGCGTCTGCACTaGACAGGCCAGATTCACAAA +
Preference number: 4 (lower is better)
Translates to: APSGRARLWREVCCASSHQQRLH*TGQIHK
Trigger: TTTGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTG...GTGACTAGAAGCGCAACAGACTTCTCGCCATAGTCGAGCTCTCCCGCTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp CGTCTCCTCCGGCGAGACGAGGCCGGGCTTAGAAAAAGGGCAGCGAAGACCCAGGAGCATGGCTACCAGTaGATAATACCAGGAGCAGAT +
Preference number: 4 (lower is better)
Translates to: RLLRRDEAGLRKRAAKTQEHGYQ*IIPGAD
Trigger: ATCTGCTCCTGGTATTATGCACTGGTAGCCATGCTC...CTGGGTCTTCGCTGCCCTTTTTCTAAGCCCGGCCTCGTCTCGCCGGAGGAGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp TCTTGGTGTGTGGGGGCCCTTCCTCCAGGCGTAAGAGGGCATAGCGAGCCGCACGAGCATGGCTACCAGTaGATAATACCAGGAGCAGAT +
Preference number: 4 (lower is better)
Translates to: SWCVGALPPGVRGHSEPHEHGYQ*IIPGAD
Trigger: ATCTGCTCCTGGTATTATGCACTGGTAGCCATGCTC...GTGCGGCTCGCTATGCCCTCTTACGCCTGGAGGAAGGGCCCCCACACACCAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
CDS-3UTR GCA 90 bp ACTTGCATAAGAGCCGATGAGAAGAGGTTGCTCGCGTCTCTGCAGCCGCAGTGGATCACCCGGTCCAGGTaGTCTGTGAGGACCTCGAGA +
Preference number: 4 (lower is better)
Translates to: TCIRADEKRLLASLQPQWITRSR*SVRTSR
Trigger: TCTCGAGGTCCTCACAGAGCACCTGGACCGGGTGAT...CCACTGCGGCTGCAGAGACGCGAGCAACCTCTTCTCATCGGCTCTTATGCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp GAAAGCGTGGCCTCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACAGGCCAATCCTGGCCCCAACTTaGATAAGAGCCGATGAGAAG +
Preference number: 4 (lower is better)
Translates to: ESVASSWVSSAASALHRPILAPT*IRADEK
Trigger: CTTCTCATCGGCTCTTATGCAAGTTGGGGCCAGGAT...TGGCCTGTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGAGGCCACGCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR GCA 90 bp GGCCTCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACAGGAACGAGCATGCAGTaGCTGACCCCCTTAGTAATG +
Preference number: 4 (lower is better)
Translates to: GLQLGVLSSVCTAQARFTGTSMQ*LTPLVM
Trigger: CATTACTAAGGGGGTCAGGCACTGCATGCTCGTTCC...TGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR GCA 90 bp GGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGTGCCTGACGATACAGCCCCCTTCTaGACAGCCCATCACATCAGC +
Preference number: 4 (lower is better)
Translates to: GGTVPSPRWCWNEHAVPDDTAPF*TAHHIS
Trigger: GCTGATGTGATGGGCTGTGCAGAAGGGGGCTGTATC...GTCAGGCACTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp GGTGCTGGAACGAGCATGCAGTGCCTGACCCCCTTAGTAATGTGCCCTAGGGGAGATACAGCCCCCTTCTaGACAGCCCATCACATCAGC +
Preference number: 4 (lower is better)
Translates to: GAGTSMQCLTPLVMCPRGDTAPF*TAHHIS
Trigger: GCTGATGTGATGGGCTGTGCAGAAGGGGGCTGTATC...TCCCCTAGGGCACATTACTAAGGGGGTCAGGCACTGCATGCTCGTTCCAGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp CCGCCTGGGCCTAAAGCACTTTCGCTCTCAAACTCTTGGACGTCAAGGAAAATTAGGAAGAAGCTGCAGTaGCCGCCCGCCCGGCGCACA +
Preference number: 4 (lower is better)
Translates to: PPGPKALSLSNSWTSRKIRKKLQ*PPARRT
Trigger: TGTGCGCCGGGCGGGCGGGCACTGCAGCTTCTTCCT...AATTTTCCTTGACGTCCAAGAGTTTGAGAGCGAAAGTGCTTTAGGCCCAGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR GCA 90 bp CTGGGGCTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGCCGATGAGAAGAGGTTaGTCGCGTCTCAGCAGGATT +
Preference number: 4 (lower is better)
Translates to: LGLEVLYPVPDGAGTSMQPMRRG*SRLSRI
Trigger: AATCCTGCTGAGACGCGAGCAACCTCTTCTCATCGG...CTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616202.4
CDS-3UTR CCA 90 bp TGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACAAACATGTAGCACATTGCCATCACCCGGGTTaGCTCCCCCATCGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: CPQQRLHCTGQIHKHVAHCHHPG*LPHRRP
Trigger: AGGACGGCGATGGGGGAGCCAACCCGGGTGATGGCA...ATGTGCTACATGTTTGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
CDS-3UTR CCA 90 bp TCTACTGAAGGATGCAGGGGGCTGGTGTCTAACACCTCCAGCTTCCTGATTGAGGAAGGTGCCCATGCGTaGGGCCTGCACCGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: STEGCRGLVSNTSSFLIEEGAHA*GLHRLL
Trigger: AAGAAGCCGGTGCAGGCCCCACGCATGGGCACCTTC...CTCAATCAGGAAGCTGGAGGTGTTAGACACCAGCCCCCTGCATCCTTCAGTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp ACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGGGCACCCCCAAACTCTaGGCCCAGAGACCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: TAHHISSGIFRPPEGRTWGTPKL*AQRPGN
Trigger: ATTTCCAGGTCTCTGGGCCCAGAGTTTGGGGGTGCC...CCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp CTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGTGCCTGGGCCCCATAGCCGTGTaGTCACCGTCTCATTTCCTT +
Preference number: 4 (lower is better)
Translates to: LEVLYPVPDGAGTSMQCLGPIAV*SPSHFL
Trigger: AAGGAAATGAGACGGTGACCACACGGCTATGGGGCC...CAGGCACTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616933.4
CDS-3UTR CCA 90 bp GGTGCTGGAACGAGCATGCAGTGCCTGACCCCCTTAGTAATGTGCCCTAGGGGACCACAATCACGCCCTTaGTCAGGTAGGAGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: GAGTSMQCLTPLVMCPRGPQSRP*SGRSSR
Trigger: TCTGGAGCTCCTACCTGACCAAGGGCGTGATTGTGG...TCCCCTAGGGCACATTACTAAGGGGGTCAGGCACTGCATGCTCGTTCCAGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616933.4
CDS-3UTR CCA 90 bp CTTCCCAAGCCAGCTTGGCACAGACATCAAAGCCATGGCGAGACAGCGTGCGGTACCACATTCTGGTCTTaGTCCACACGCACCAGCACC +
Preference number: 4 (lower is better)
Translates to: LPKPAWHRHQSHGETACGTTFWS*STRTST
Trigger: GGTGCTGGTGCGTGTGGACCAAGACCAGAATGTGGT...ACCGCACGCTGTCTCGCCATGGCTTTGATGTCTGTGCCAAGCTGGCTTGGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR CCA 90 bp AGGCCGGGCTTAGAAAAAGGGCAGCGAAGACCCAGGGGCCAAACTGGCACTGAGTCATCTGTGATACTCTaGATCTCCCGCTCCCGCTCA +
Preference number: 4 (lower is better)
Translates to: RPGLEKGQRRPRGQTGTESSVIL*ISRSRS
Trigger: TGAGCGGGAGCGGGAGATCCAGAGTATCACAGATGA...CTCAGTGCCAGTTTGGCCCCTGGGTCTTCGCTGCCCTTTTTCTAAGCCCGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp GGGAGGCGAATCCAGGAAAAGTTGGACCCTTGTCTCACCTCATCTCGGAAAAGGACCAGCCGTCTCTTCTaGGACGTTCAGGCGGAGCCG +
Preference number: 4 (lower is better)
Translates to: GRRIQEKLDPCLTSSRKRTSRLF*DVQAEP
Trigger: CGGCTCCGCCTGAACGTCCCAGAAGAGACGGCTGGT...CCTTTTCCGAGATGAGGTGAGACAAGGGTCCAACTTTTCCTGGATTCGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp GCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGCATGCGCCGCACGTTaGACTGGTTCAAGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: AQPITSALEYSGPQKAGPACAAR*TGSSSP
Trigger: GGGAGAACTTGAACCAGTCCAACGTGCGGCGCATGC...AGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CTGTTTCATCAACGGAAACTTTGCTCTTGCCAACCAGACAATCTGGGCCCAGATGCGCTCGGGCCCGGGTaGCAGGTCCTGGTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: LFHQRKLCSCQPDNLGPDALGPG*QVLVLR
Trigger: CCTGAGAACCAGGACCTGCCACCCGGGCCCGAGCGC...ATCTGGGCCCAGATTGTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATGAAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp AGGGCCCTGGGGCTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCCACAATTTCAGTCTTTaGCGAGGAGCCATGGGATAC +
Preference number: 4 (lower is better)
Translates to: RALGLEVLYPVPDGAGTSHNFSL*RGAMGY
Trigger: GTATCCCATGGCTCCTCGCCAAAGACTGAAATTGTG...GCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAGCCCCAGGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp CCGCCTGGGCCTAAAGCACTTTCGCTCTCAAACTCTTGGACGTCAAGGAAAATTCATCACGGGCGGCTCTaGGGCCTCTCAGTGGGTCCG +
Preference number: 4 (lower is better)
Translates to: PPGPKALSLSNSWTSRKIHHGRL*GLSVGP
Trigger: CGGACCCACTGAGAGGCCCCAGAGCCGCCCGTGATG...AATTTTCCTTGACGTCCAAGAGTTTGAGAGCGAAAGTGCTTTAGGCCCAGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp TCTACTGAAGGATGCAGGGGGCTGGTGTCTAACACCTCCAGCTTCCTGATTGAGGGGCCAAGGATGAGCTaGGGAAGCCAAAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: STEGCRGLVSNTSSFLIEGPRMS*GSQRPW
Trigger: CCAGGGCCTTTGGCTTCCCCAGCTCATCCTTGGCCC...CTCAATCAGGAAGCTGGAGGTGTTAGACACCAGCCCCCTGCATCCTTCAGTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp CCAGCTCTGCCTTGGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGCTCAGACCAGGCTGGTaGAGCGGAAGGGCCAAGGAT +
Preference number: 4 (lower is better)
Translates to: PALPWAQRKRGGEVRITQLRPGW*SGRAKD
Trigger: ATCCTTGGCCCTTCCGCTCCACCAGCCTGGTCTGAG...CTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAGGCAGAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp TTCTGCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGGTCCGGATTACTCAGTaGCGCCAGCTCTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: FCTAHHISSGIFRPPEGRVRITQ*RQLWEV
Trigger: CACCTCCCAGAGCTGGCGCCACTGAGTAATCCGGAC...CCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGCAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp GGCCTCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACAGCTCCAGCTCTGCCTTaGGCTCAAAGGAAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: GLQLGVLSSVCTAQARFTAPALP*AQRKRG
Trigger: ACCTCTTTTCCTTTGAGCCCAAGGCAGAGCTGGAGC...TGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR CCA 90 bp TTACTCAGTGGCGCCAGCTCTGGGAGGTGCGTGAGATGTCAAGCTAGGTGCGCAAAGGATGCAGGGGGCTaGTGTCTAACACCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LLSGASSGRCVRCQARCAKDAGG*CLTPPA
Trigger: AGCTGGAGGTGTTAGACACCAGCCCCCTGCATCCTT...TGCGCACCTAGCTTGACATCTCACGCACCTCCCAGAGCTGGCGCCACTGAGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp ACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGGGCAGGACCTGGCTGTaGTGTTCAGAGGGAGGTCTA +
Preference number: 4 (lower is better)
Translates to: TAHHISSGIFRPPEGRTWGRTWL*CSEGGL
Trigger: TAGACCTCCCTCTGAACACCACAGCCAGGTCCTGCC...CCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR TCA 90 bp ACTTGCATAAGAGCCGATGAGAAGAGGTTGCTCGCGTCTCTGCAGCCGCAGTGGTGCAGAAGGACTCCATaGTGCCTGCAATGCCCACCA +
Preference number: 4 (lower is better)
Translates to: TCIRADEKRLLASLQPQWCRRTP*CLQCPP
Trigger: TGGTGGGCATTGCAGGCATCATGGAGTCCTTCTGCA...CCACTGCGGCTGCAGAGACGCGAGCAACCTCTTCTCATCGGCTCTTATGCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp ATCGAAAGCGTGGCCTCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACAGGTACAGGAGCAGCAGATaGACACCATGCAGAAGGACT +
Preference number: 4 (lower is better)
Translates to: IESVASSWVSSAASALHRYRSSR*TPCRRT
Trigger: AGTCCTTCTGCATGGTGTTCATCTGCTGCTCCTGTA...CCTGTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGAGGCCACGCTTTCGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
CDS-3UTR TCA 90 bp GCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTCCCGGACCAGCTCAATaGAGTTCCTCCACGTCTGAT +
Preference number: 4 (lower is better)
Translates to: AQPITSALEYSGPQKAGPPGPAQ*SSSTSD
Trigger: ATCAGACGTGGAGGAACTTCATTGAGCTGGTCCGGG...AGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp TTACTCAGTGGCGCCAGCTCTGGGAGGTGCGTGAGATGTCAAGCTAGGTGCGCATTGCATAAGAGCCGATaGGAAGAGGTTGCTCGCGTC +
Preference number: 4 (lower is better)
Translates to: LLSGASSGRCVRCQARCALHKSR*EEVARV
Trigger: GACGCGAGCAACCTCTTCTCATCGGCTCTTATGCAA...TGCGCACCTAGCTTGACATCTCACGCACCTCCCAGAGCTGGCGCCACTGAGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616202.4
ENST00000616933.4
CDS-3UTR TCA 90 bp AACTGGCAGACCTCCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGACACAAGATCAATACTaGGGCAGGATGCGGCATACT +
Preference number: 4 (lower is better)
Translates to: NWQTSKPTPATPDAVWVATQDQY*GRMRHT
Trigger: AGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGT...CGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGGAGGTCTGCCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR TCA 90 bp CTTGGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCGCCTGGGCAACAGAGTaGGACTCAGCAGGATTTCGA +
Preference number: 4 (lower is better)
Translates to: LGLKGKEVVRSGLLSGASAWATE*DSAGFR
Trigger: TCGAAATCCTGCTGAGTCTCACTCTGTTGCCCAGGC...GCTGGCGCCACTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR GCA 90 bp ACTTGCATAAGAGCCGATGAGAAGAGGTTGCTCGCGTCTCTGCAGCCGCAGTGGTGCCCACCACGAGGTTaGCATTCACAGCTTCGCCAA +
Preference number: 4 (lower is better)
Translates to: TCIRADEKRLLASLQPQWCPPRG*HSQLRQ
Trigger: TTGGCGAAGCTGTGAATGGCAACCTCGTGGTGGGCA...CCACTGCGGCTGCAGAGACGCGAGCAACCTCTTCTCATCGGCTCTTATGCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp CTTGGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCCCATGGCCAAAGACCTaGAGGAAGGGCACAATGCCA +
Preference number: 4 (lower is better)
Translates to: LGLKGKEVVRSGLLSGASPWPKT*RKGTMP
Trigger: TGGCATTGTGCCCTTCCTGCAGGTCTTTGGCCATGG...GCTGGCGCCACTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp GGGTGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACAAACATGTAGCATGCCAATCTCGCAGATaGAGGCAGTCAGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: GCPQQRLHCTGQIHKHVACQSRR*RQSGAG
Trigger: CCCTGCTCCTGACTGCCTGCATCTGCGAGATTGGCA...TGCTACATGTTTGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
CDS-3UTR GCA 90 bp GGGTGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACAAACATGTAGCAGTCCTCAGCAGCGTCTaGACTGCACAGGCCAGATTC +
Preference number: 4 (lower is better)
Translates to: GCPQQRLHCTGQIHKHVAVLSSV*TAQARF
Trigger: GAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGAC...TGCTACATGTTTGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
CDS-3UTR GCA 90 bp TGGGAGGCGAATCCAGGAAAAGTTGGACCCTTGTCTCACCTCATCTCGGAAAAGCCTTCTGGCGCCAGTTaGGGGGCCAGCCAACAAGCA +
Preference number: 4 (lower is better)
Translates to: WEANPGKVGPLSHLISEKPSGAS*GASQQA
Trigger: TGCTTGTTGGCTGGCCCCGCAACTGGCGCCAGAAGG...CTTTTCCGAGATGAGGTGAGACAAGGGTCCAACTTTTCCTGGATTCGCCTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp TCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCTGTGGTGTTCAGAGGGAACCAAACGTCGATGCTaGCCTCAGAGAAGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: SGIFRPPEGRTWLWCSEGTKRRC*PQRSAQ
Trigger: CTGAGCGCTTCTCTGAGGGCAGCATCGACGTTTGGT...TCCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp CTTGGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCACCCCCTTAGTAATGTaGCCTAGGGGAAGGGAACCC +
Preference number: 4 (lower is better)
Translates to: LGLKGKEVVRSGLLSGASTPLVM*PRGREP
Trigger: GGGTTCCCTTCCCCTAGGGCACATTACTAAGGGGGT...GCTGGCGCCACTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp CCAGCTCTGCCTTGGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGCCCAGTCCCAGATGGTaGTGGAACGAGCATGCAGTG +
Preference number: 4 (lower is better)
Translates to: PALPWAQRKRGGEVRITQPSPRW*WNEHAV
Trigger: CACTGCATGCTCGTTCCAGCACCATCTGGGACTGGG...CTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAGGCAGAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp CAAACTGGCACTGAGGAGCTCTGGTCTCTGCGCGGCGGGGCGCCCTCTCCGAATCATCAACGGAAACTTTaGTCTTGCCAACCAGACAAT +
Preference number: 4 (lower is better)
Translates to: QTGTEELWSLRGGAPSPNHQRKL*SCQPDN
Trigger: ATTGTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATG...ATTCGGAGAGGGCGCCCCGCCGCGCAGAGACCAGAGCTCCTCAGTGCCAGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp GGGTGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACAAACATGTAGCAGGCACCCCCAAACTCTaGGCCCAGAGACCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: GCPQQRLHCTGQIHKHVAGTPKL*AQRPGN
Trigger: ATTTCCAGGTCTCTGGGCCCAGAGTTTGGGGGTGCC...TGCTACATGTTTGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR CCA 90 bp CTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCTGTGGTGTTCAGAGGGCAGACATCAAAGCCATaGCGAGACAGCGTGCGGTTA +
Preference number: 4 (lower is better)
Translates to: LWNIQAPRRQDLAVVFRGQTSKP*RDSVRL
Trigger: TAACCGCACGCTGTCTCGCCATGGCTTTGATGTCTG...CCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616933.4
CDS-3UTR CCA 90 bp AATATCGAAAGCGTGGCCTCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACCCATTGGCCTTGCCATaGCCAAAGACCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: NIESVASSWVSSAASALHPLALP*PKTCRK
Trigger: CTTCCTGCAGGTCTTTGGCCATGGCAAGGCCAATGG...GTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGAGGCCACGCTTTCGATATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR CCA 90 bp CTTGGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCAGGTCGGCTCTCCATTaGCCTTGCCATGGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: LGLKGKEVVRSGLLSGASRSALH*PCHGQR
Trigger: TCTTTGGCCATGGCAAGGCCAATGGAGAGCCGACCT...GCTGGCGCCACTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp TGGGAGGCGAATCCAGGAAAAGTTGGACCCTTGTCTCACCTCATCTCGGAAAAGACCAGCCGTCTCTTCTaGGACGTTCAGGCGGAGCCG +
Preference number: 4 (lower is better)
Translates to: WEANPGKVGPLSHLISEKTSRLF*DVQAEP
Trigger: CGGCTCCGCCTGAACGTCCCAGAAGAGACGGCTGGT...CTTTTCCGAGATGAGGTGAGACAAGGGTCCAACTTTTCCTGGATTCGCCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp TTCTGCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGGCATGCGCCGCACGTTaGACTGGTTCAAGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: FCTAHHISSGIFRPPEGRACAAR*TGSSSP
Trigger: GGGAGAACTTGAACCAGTCCAACGTGCGGCGCATGC...CCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGCAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp AGTCCCCTGATCGAATCTCAGAGGGGACTTGGTGTAACTGGCAGACCTCCAAACTGGGAAGGGGAGGAATaGGCCGCATGGACTACCTGG +
Preference number: 4 (lower is better)
Translates to: SPLIESQRGLGVTGRPPNWEGEE*AAWTTW
Trigger: CCAGGTAGTCCATGCGGCCCATTCCTCCCCTTCCCA...GTTTGGAGGTCTGCCAGTTACACCAAGTCCCCTCTGAGATTCGATCAGGGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp TCTACTGAAGGATGCAGGGGGCTGGTGTCTAACACCTCCAGCTTCCTGATTGAGACAGGAGCTGCCAGATaGGGACGGGGGAGGAACATC +
Preference number: 4 (lower is better)
Translates to: STEGCRGLVSNTSSFLIETGAAR*GRGRNI
Trigger: GATGTTCCTCCCCCGTCCCCATCTGGCAGCTCCTGT...CTCAATCAGGAAGCTGGAGGTGTTAGACACCAGCCCCCTGCATCCTTCAGTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp TCCCCTATCCTGGCCCCAACTTGCATAAGAGCCGATGAGAAGAGGTTGCTCGCGGTACCCAGTCCCAGATaGTGCTGGAACGAGCATGCA +
Preference number: 4 (lower is better)
Translates to: SPILAPTCIRADEKRLLAVPSPR*CWNEHA
Trigger: TGCATGCTCGTTCCAGCACCATCTGGGACTGGGTAC...CGCGAGCAACCTCTTCTCATCGGCTCTTATGCAAGTTGGGGCCAGGATAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp GGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGTGCCTGACGGGACTTGGTGTAACTaGCAGACCTCCAAACCTACC +
Preference number: 4 (lower is better)
Translates to: GGTVPSPRWCWNEHAVPDGTWCN*QTSKPT
Trigger: GGTAGGTTTGGAGGTCTGCCAGTTACACCAAGTCCC...GTCAGGCACTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp GTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCTCTGGGAGGTGCGTGAGATGTCCATCACATCAGCTCTaGAATATTCAGGCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: VVRSGLLSGASSGRCVRCPSHQL*NIQAPR
Trigger: TCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGG...ACATCTCACGCACCTCCCAGAGCTGGCGCCACTGAGTAATCCGGACCTCACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR CAA 72 bp TCATCACCATTGCGGTTGCGGGGAGGCCCAGGCATGTaGAGCAAAACAAGCTTGGCGTCCCGGGATTTCTTC +
Preference number: 4 (lower is better)
Translates to: SSPLRLRGGPGM*SKTSLASRDFF
Trigger: GAAGAAATCCCGGGACGCCAAGCTTGTTTTGCTCAACATGCCTGGGCCTCCCCGCAACCGCAATGGTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR TCA 90 bp GGGTGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACAAACATGTAGCATGCAGAAGGACTCCATaGTGCCTGCAATGCCCACCA +
Preference number: 4 (lower is better)
Translates to: GCPQQRLHCTGQIHKHVACRRTP*CLQCPP
Trigger: TGGTGGGCATTGCAGGCATCATGGAGTCCTTCTGCA...TGCTACATGTTTGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
CDS-3UTR TCA 90 bp AGGCCGGGCTTAGAAAAAGGGCAGCGAAGACCCAGGGGCCAAACTGGCACTGAGAGGAGGTCATATCACTaGAGACATAAGGGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: RPGLEKGQRRPRGQTGTERRSYH*RHKGGP
Trigger: TGGACCACCCTTATGTCTTCAGTGATATGACCTCCT...CTCAGTGCCAGTTTGGCCCCTGGGTCTTCGCTGCCCTTTTTCTAAGCCCGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp TCCCCTATCCTGGCCCCAACTTGCATAAGAGCCGATGAGAAGAGGTTGCTCGCGACAGAACAACGGAGCTaGTGTAGACAGCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SPILAPTCIRADEKRLLATEQRS*CRQQRW
Trigger: CCACCTCTGCTGTCTACATCAGCTCCGTTGTTCTGT...CGCGAGCAACCTCTTCTCATCGGCTCTTATGCAAGTTGGGGCCAGGATAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp AAGCGAGAGGAGCAGAAAAGGCCCCATAGCCGTGTGGTCACCGTCTCATTTCCTCCCGGACCAGCTCAATaGAGTTCCTCCACGTCTGAT +
Preference number: 4 (lower is better)
Translates to: KREEQKRPHSRVVTVSFPPGPAQ*SSSTSD
Trigger: ATCAGACGTGGAGGAACTTCATTGAGCTGGTCCGGG...AGGAAATGAGACGGTGACCACACGGCTATGGGGCCTTTTCTGCTCCTCTCGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR TCA 90 bp CCAGCTCTGCCTTGGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGTGTCCTTGGTCCAGGTaGGATGCACCTTCTCCGGAT +
Preference number: 4 (lower is better)
Translates to: PALPWAQRKRGGEVRITQCPWSR*DAPSPD
Trigger: ATCCGGAGAAGGTGCATCTCACCTGGACCAAGGACA...CTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAGGCAGAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp AGTCCCCTGATCGAATCTCAGAGGGGACTTGGTGTAACTGGCAGACCTCCAAACGGTCCAGGTGCTCTGTaGGGACCTCGAGAAACTCCA +
Preference number: 4 (lower is better)
Translates to: SPLIESQRGLGVTGRPPNGPGAL*GPRETP
Trigger: TGGAGTTTCTCGAGGTCCTCACAGAGCACCTGGACC...GTTTGGAGGTCTGCCAGTTACACCAAGTCCCCTCTGAGATTCGATCAGGGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp CCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCCAGCTCCAGCTCACTGAACACTTACACTaGAAATTAAAGGCAGGCCTA +
Preference number: 4 (lower is better)
Translates to: PNLPQPHLTLSGWRQLQLTEHLH*KLKAGL
Trigger: TAGGCCTGCCTTTAATTTTCAGTGTAAGTGTTCAGT...GAGCTGGAGCTGGCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR TCA 90 bp CAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCAGATGACTGAACACTTACACTaGAAATTAAAGGCAGGCCTA +
Preference number: 4 (lower is better)
Translates to: QSTEKAAGSLRRDRSCQMTEHLH*KLKAGL
Trigger: TAGGCCTGCCTTTAATTTTCAGTGTAAGTGTTCAGT...CATCTGGCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR TCA 90 bp GCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTATGGGATATGGGGATTaGCTTCTGGGCATCCCTCAG +
Preference number: 4 (lower is better)
Translates to: AQPITSALEYSGPQKAGPMGYGD*LLGIPQ
Trigger: CTGAGGGATGCCCAGAAGTCAATCCCCATATCCCAT...AGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616201.4
CDS-3UTR GCA 90 bp GCCCCCAGCGGGAGAGCTCGACTATGGCGAGAAGTCTGTTGCGCTTCTAGTCACACCATTCGTTGCAATTaGACTCATGGAGATGGCCGT +
Preference number: 4 (lower is better)
Translates to: APSGRARLWREVCCASSHTIRCN*THGDGR
Trigger: ACGGCCATCTCCATGAGTGCAATTGCAACGAATGGT...GTGACTAGAAGCGCAACAGACTTCTCGCCATAGTCGAGCTCTCCCGCTGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp TGGCAGACCTCCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCCACACAACACCATTCGTTaGAATTGCACTCATGGAGAT +
Preference number: 4 (lower is better)
Translates to: WQTSKPTPATPDAVWVAPHNTIR*NCTHGD
Trigger: ATCTCCATGAGTGCAATTGCAACGAATGGTGTTGTG...TGGCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGGAGGTCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp TGGGAGGCGAATCCAGGAAAAGTTGGACCCTTGTCTCACCTCATCTCGGAAAAGATGGCCAGGCCAGAGTaGCCACCACGAGGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: WEANPGKVGPLSHLISEKMARPE*PPRGCH
Trigger: ATGGCAACCTCGTGGTGGGCACTCTGGCCTGGCCAT...CTTTTCCGAGATGAGGTGAGACAAGGGTCCAACTTTTCCTGGATTCGCCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp TTCTGCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGGCTCTCCATTGGCCTTaGCATGGCCAAAGACCTGCA +
Preference number: 4 (lower is better)
Translates to: FCTAHHISSGIFRPPEGRALHWP*HGQRPA
Trigger: TGCAGGTCTTTGGCCATGGCAAGGCCAATGGAGAGC...CCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGCAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp TCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCTGTGGTGTTCAGAGGGAAGGATCTGGGAACGCTaGTCCATCACCAACGTCTTC +
Preference number: 4 (lower is better)
Translates to: SGIFRPPEGRTWLWCSEGRIWER*SITNVF
Trigger: GAAGACGTTGGTGATGGAGCAGCGTTCCCAGATCCT...TCCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp TCCCCTATCCTGGCCCCAACTTGCATAAGAGCCGATGAGAAGAGGTTGCTCGCGTTGGTCCAGGTGAGATaGACCTTCTCCGGATCTGTC +
Preference number: 4 (lower is better)
Translates to: SPILAPTCIRADEKRLLALVQVR*TFSGSV
Trigger: GACAGATCCGGAGAAGGTGCATCTCACCTGGACCAA...CGCGAGCAACCTCTTCTCATCGGCTCTTATGCAAGTTGGGGCCAGGATAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp TCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACAAACATCTCCCAACCTTTATTaGAGCGTCTCCTCCGGCGAG +
Preference number: 4 (lower is better)
Translates to: SSWVSSAASALHRPDSQTSPNLY*SVSSGE
Trigger: CTCGCCGGAGGAGACGCTGCAATAAAGGTTGGGAGA...TGTTTGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR GCA 90 bp CCAGCTCTGCCTTGGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGCGCCAGCTCCAGCTCTaGCTTGGGCTCAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: PALPWAQRKRGGEVRITQRQLQL*LGLKGK
Trigger: TTTTCCTTTGAGCCCAAGGCAGAGCTGGAGCTGGCG...CTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAGGCAGAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp CAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCAGATGTCAACTTCATTGCATTaGCCTGCACATAGATCATCT +
Preference number: 4 (lower is better)
Translates to: QSTEKAAGSLRRDRSCQMSTSLH*PAHRSS
Trigger: AGATGATCTATGTGCAGGGCAATGCAATGAAGTTGA...CATCTGGCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp TCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGCACGGAGGAAGAAGCTaGAGTGCCCGCCCGCCCGGC +
Preference number: 4 (lower is better)
Translates to: SYWHKEHKINTEAGCGILHGGRS*SARPPG
Trigger: GCCGGGCGGGCGGGCACTGCAGCTTCTTCCTCCGTG...CAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR GCA 90 bp TCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACAAACAGCTCTCCATTGGCCTTaGCATGGCCAAAGACCTGGA +
Preference number: 4 (lower is better)
Translates to: SSWVSSAASALHRPDSQTALHWP*HGQRPG
Trigger: TCCAGGTCTTTGGCCATGGCAAGGCCAATGGAGAGC...TGTTTGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539566.3
CDS-3UTR CCA 90 bp GGGTGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACAAACATGTAGCAAGGTCGGCTCTCCATTaGCCTTGCCATGGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: GCPQQRLHCTGQIHKHVARSALH*PCHGQR
Trigger: TCTTTGGCCATGGCAAGGCCAATGGAGAGCCGACCT...TGCTACATGTTTGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
CDS-3UTR CCA 90 bp TGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACAAACATGTAGCACATAGCGTGGCCTCCAGTTaGGTGTCCTCAGCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: CPQQRLHCTGQIHKHVAHSVASS*VSSAAS
Trigger: AGACGCTGCTGAGGACACCCAACTGGAGGCCACGCT...ATGTGCTACATGTTTGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
CDS-3UTR CCA 90 bp GTCCTAGTTAGAGGAGAGCAGACAGGCGCTAAGGACAAAGCGCGTGCGACTCCATGCCCGCTGGGCCTGTaGATGATTTTCCAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: VLVRGEQTGAKDKARATPCPLGL*MIFQKG
Trigger: ACCTTTCTGGAAAATCATCCACAGGCCCAGCGGGCA...TGGAGTCGCACGCGCTTTGTCCTTAGCGCCTGTCTGCTCTCCTCTAACTAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp TCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCTGTGGTGTTCAGAGGGATCATCTGTGATACTCTaGATCTCCCGCTCCCGCTCA +
Preference number: 4 (lower is better)
Translates to: SGIFRPPEGRTWLWCSEGSSVIL*ISRSRS
Trigger: TGAGCGGGAGCGGGAGATCCAGAGTATCACAGATGA...TCCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp GGGTGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACAAACATGTAGCAGGGAGAGCTCGACTATaGCGAGAAGTCTGTTGCGCT +
Preference number: 4 (lower is better)
Translates to: GCPQQRLHCTGQIHKHVAGRARL*REVCCA
Trigger: AGCGCAACAGACTTCTCGCCATAGTCGAGCTCTCCC...TGCTACATGTTTGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR CCA 90 bp TGGGAGGCGAATCCAGGAAAAGTTGGACCCTTGTCTCACCTCATCTCGGAAAAGGTCCGGATTACTCAGTaGCGCCAGCTCTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: WEANPGKVGPLSHLISEKVRITQ*RQLWEV
Trigger: CACCTCCCAGAGCTGGCGCCACTGAGTAATCCGGAC...CTTTTCCGAGATGAGGTGAGACAAGGGTCCAACTTTTCCTGGATTCGCCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp ACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGGGGACTTGGTGTAACTaGCAGACCTCCAAACCTACC +
Preference number: 4 (lower is better)
Translates to: TAHHISSGIFRPPEGRTWGTWCN*QTSKPT
Trigger: GGTAGGTTTGGAGGTCTGCCAGTTACACCAAGTCCC...CCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp TCTACTGAAGGATGCAGGGGGCTGGTGTCTAACACCTCCAGCTTCCTGATTGAGGGCAGGACCTGGCTGTaGTGTTCAGAGGGAGGTCTA +
Preference number: 4 (lower is better)
Translates to: STEGCRGLVSNTSSFLIEGRTWL*CSEGGL
Trigger: TAGACCTCCCTCTGAACACCACAGCCAGGTCCTGCC...CTCAATCAGGAAGCTGGAGGTGTTAGACACCAGCCCCCTGCATCCTTCAGTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp CTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGTGCCTGGCCAACCAGACAATCTaGGCCCAGATAGTGCAACTT +
Preference number: 4 (lower is better)
Translates to: LEVLYPVPDGAGTSMQCLANQTI*AQIVQL
Trigger: AAGTTGCACTATCTGGGCCCAGATTGTCTGGTTGGC...CAGGCACTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp GGCCTCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACACCATGGCCAAAGACCTaGAAATCATGTAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: GLQLGVLSSVCTAQARFTPWPKT*KSCSRS
Trigger: GCTCCTACTACATGATTTCCAGGTCTTTGGCCATGG...TGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539566.3
CDS-3UTR CCA 90 bp AGGATGTGGTCGTGGCCATGTGAGGCTTGGAGCAGGGCGATGATGACAGAGGGGGACGTGGGGATCAGTTaGATTTGCTTTGACGTCTTC +
Preference number: 4 (lower is better)
Translates to: RMWSWPCEAWSRAMMTEGDVGIS*ICFDVF
Trigger: GAAGACGTCAAAGCAAATCCAACTGATCCCCACGTC...CCCCTCTGTCATCATCGCCCTGCTCCAAGCCTCACATGGCCACGACCACATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628272.1
3UTR CAA 72 bp AAGCGCTCAGGGTTCCCAGGAAACATGGAAACGTTCTaGGTGACCAGCAGGGCTAAGTGGCCAGCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: KRSGFPGNMETF*VTSRAKWPAVV
Trigger: AACCACAGCTGGCCACTTAGCCCTGCTGGTCACCAAGAACGTTTCCATGTTTCCTGGGAACCCTGAGCGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR TCA 90 bp GCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTTACAGGAGCAGCAGATaGACACCATGCAGAAGGACT +
Preference number: 4 (lower is better)
Translates to: AQPITSALEYSGPQKAGPYRSSR*TPCRRT
Trigger: AGTCCTTCTGCATGGTGTTCATCTGCTGCTCCTGTA...AGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR TCA 90 bp TTACTCAGTGGCGCCAGCTCTGGGAGGTGCGTGAGATGTCAAGCTAGGTGCGCAAGGAGGTCATATCACTaGAGACATAAGGGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: LLSGASSGRCVRCQARCARRSYH*RHKGGP
Trigger: TGGACCACCCTTATGTCTTCAGTGATATGACCTCCT...TGCGCACCTAGCTTGACATCTCACGCACCTCCCAGAGCTGGCGCCACTGAGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616933.4
CDS-3UTR TCA 90 bp TCCCCTATCCTGGCCCCAACTTGCATAAGAGCCGATGAGAAGAGGTTGCTCGCGCCTCGACCTCCGCAGTaGTGCGTAAATGATACAGAA +
Preference number: 4 (lower is better)
Translates to: SPILAPTCIRADEKRLLAPRPPQ*CVNDTE
Trigger: TTCTGTATCATTTACGCATCACTGCGGAGGTCGAGG...CGCGAGCAACCTCTTCTCATCGGCTCTTATGCAAGTTGGGGCCAGGATAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp GGGAGGCGAATCCAGGAAAAGTTGGACCCTTGTCTCACCTCATCTCGGAAAAGGTCGGTTTCTTCCTCTTaGGGAGCACCCCTCCCCTAT +
Preference number: 4 (lower is better)
Translates to: GRRIQEKLDPCLTSSRKRSVSSS*GAPLPY
Trigger: ATAGGGGAGGGGTGCTCCTCAAGAGGAAGAAACCGA...CCTTTTCCGAGATGAGGTGAGACAAGGGTCCAACTTTTCCTGGATTCGCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp AACTGGCAGACCTCCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCAGGATGCGGCATACTaGACACTTACACTGAAAATT +
Preference number: 4 (lower is better)
Translates to: NWQTSKPTPATPDAVWVAQDAAY*TLTLKI
Trigger: AATTTTCAGTGTAAGTGTTCAGTATGCCGCATCCTG...CGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGGAGGTCTGCCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR TCA 90 bp CTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCTGTGGTGTTCAGAGGGACACAAGATCAATACTaGGGCAGGATGCGGCATACT +
Preference number: 4 (lower is better)
Translates to: LWNIQAPRRQDLAVVFRGTQDQY*GRMRHT
Trigger: AGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGT...CCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp AGTCCCCTGATCGAATCTCAGAGGGGACTTGGTGTAACTGGCAGACCTCCAAACACCAAACGTCGATGCTaGCCTCAGAGAAGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: SPLIESQRGLGVTGRPPNTKRRC*PQRSAQ
Trigger: CTGAGCGCTTCTCTGAGGGCAGCATCGACGTTTGGT...GTTTGGAGGTCTGCCAGTTACACCAAGTCCCCTCTGAGATTCGATCAGGGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp CCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCCAGCTCCAGCTCTCATTCTTGGTTAAATaGATCTGTTTGAGGATCTGG +
Preference number: 4 (lower is better)
Translates to: PNLPQPHLTLSGWRQLQLSFLVK*ICLRIW
Trigger: CCAGATCCTCAAACAGATGCATTTAACCAAGAATGA...GAGCTGGAGCTGGCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp GAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGAACACTTACACTGAAAGCCGCACGGCCGTGTaGATGCGCCGCACGTTGGAC +
Preference number: 4 (lower is better)
Translates to: EHKINTEAGCGILNTYTESRTAV*MRRTLD
Trigger: GTCCAACGTGCGGCGCATGCACACGGCCGTGCGGCT...TTCAGTGTAAGTGTTCAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp TACAGCCCCCTTCTGCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCCGGAAACTTTGCTCTTaGCAACCAGACAATCTGGGC +
Preference number: 4 (lower is better)
Translates to: YSPLLHSPSHQLWNIQAPRKLCS*QPDNLG
Trigger: GCCCAGATTGTCTGGTTGGCAAGAGCAAAGTTTCCG...GGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGCAGAAGGGGGCTGTA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp AGGGCCCTGGGGCTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCTCAACTTCATTGCATTaGCCTGCACATAGATCATCT +
Preference number: 4 (lower is better)
Translates to: RALGLEVLYPVPDGAGTSSTSLH*PAHRSS
Trigger: AGATGATCTATGTGCAGGGCAATGCAATGAAGTTGA...GCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAGCCCCAGGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp TGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGAACACTTGCCATCACCCGGGTTaGCTCCCCCATCGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: WHKEHKINTEAGCGILNTCHHPG*LPHRRP
Trigger: AGGACGGCGATGGGGGAGCCAACCCGGGTGATGGCA...AGTGTTCAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR CCA 90 bp TCCCCTATCCTGGCCCCAACTTGCATAAGAGCCGATGAGAAGAGGTTGCTCGCGCTTCCCAAGCCAGCTTaGCACAGACATCAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: SPILAPTCIRADEKRLLALPKPA*HRHQSH
Trigger: ATGGCTTTGATGTCTGTGCCAAGCTGGCTTGGGAAG...CGCGAGCAACCTCTTCTCATCGGCTCTTATGCAAGTTGGGGCCAGGATAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp ACTTGCATAAGAGCCGATGAGAAGAGGTTGCTCGCGTCTCTGCAGCCGCAGTGGCTTCCCAAGCCAGCTTaGCACAGACATCAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: TCIRADEKRLLASLQPQWLPKPA*HRHQSH
Trigger: ATGGCTTTGATGTCTGTGCCAAGCTGGCTTGGGAAG...CCACTGCGGCTGCAGAGACGCGAGCAACCTCTTCTCATCGGCTCTTATGCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp TACAGCCCCCTTCTGCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCGCACCAGGGATGCCCTaGATCTCTGTGACATTGTTT +
Preference number: 4 (lower is better)
Translates to: YSPLLHSPSHQLWNIQAPAPGMP*ISVTLF
Trigger: AAACAATGTCACAGAGATCCAGGGCATCCCTGGTGC...GGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGCAGAAGGGGGCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616933.4
CDS-3UTR CCA 90 bp GGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCTCTGTAATATCGAAAGCGTaGCCTCCAGTTGGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: GLKGKEVVRSGLLSGASSVISKA*PPVGCP
Trigger: AGGACACCCAACTGGAGGCCACGCTTTCGATATTAC...AGAGCTGGCGCCACTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp AATATCGAAAGCGTGGCCTCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACGTAATATCGAAAGCGTaGCCTCCAGTTGGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: NIESVASSWVSSAASALHVISKA*PPVGCP
Trigger: AGGACACCCAACTGGAGGCCACGCTTTCGATATTAC...GTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGAGGCCACGCTTTCGATATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
CDS-3UTR CCA 90 bp CCGCCTGGGCCTAAAGCACTTTCGCTCTCAAACTCTTGGACGTCAAGGAAAATTGGCGGAGCCGCGTGTTaGCTGGATTCTTTCTCCGGA +
Preference number: 4 (lower is better)
Translates to: PPGPKALSLSNSWTSRKIGGAAC*LDSFSG
Trigger: TCCGGAGAAAGAATCCAGCCAACACGCGGCTCCGCC...AATTTTCCTTGACGTCCAAGAGTTTGAGAGCGAAAGTGCTTTAGGCCCAGGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp TCTACTGAAGGATGCAGGGGGCTGGTGTCTAACACCTCCAGCTTCCTGATTGAGATCTCGGAAAAGGACTaGAGAGGAGGGTGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: STEGCRGLVSNTSSFLIEISEKD*RGGWEA
Trigger: GGCTTCCCACCCTCCTCTCCAGTCCTTTTCCGAGAT...CTCAATCAGGAAGCTGGAGGTGTTAGACACCAGCCCCCTGCATCCTTCAGTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp TTTCCGCGCCTTCTCCCAACCTTTATTGCAGCGTCTCCTCCGGCGAGACGAGGCGAATCCAGGAAAAGTTaGACCCTTGTCTCACCTCAT +
Preference number: 4 (lower is better)
Translates to: FPRLLPTFIAASPPARRGESRKS*TLVSPH
Trigger: ATGAGGTGAGACAAGGGTCCAACTTTTCCTGGATTC...GCCTCGTCTCGCCGGAGGAGACGCTGCAATAAAGGTTGGGAGAAGGCGCGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp TCTACTGAAGGATGCAGGGGGCTGGTGTCTAACACCTCCAGCTTCCTGATTGAGGTACCCAGTCCCAGATaGTGCTGGAACGAGCATGCA +
Preference number: 4 (lower is better)
Translates to: STEGCRGLVSNTSSFLIEVPSPR*CWNEHA
Trigger: TGCATGCTCGTTCCAGCACCATCTGGGACTGGGTAC...CTCAATCAGGAAGCTGGAGGTGTTAGACACCAGCCCCCTGCATCCTTCAGTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp TCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCTGTGGTGTTCAGAGGGACCATCACATCAGCTCTaGAATATTCAGGCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: SGIFRPPEGRTWLWCSEGPSHQL*NIQAPR
Trigger: TCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGG...TCCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp AGTCCCCTGATCGAATCTCAGAGGGGACTTGGTGTAACTGGCAGACCTCCAAACATGGGGATTGACTTCTaGGCATCCCTCAGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: SPLIESQRGLGVTGRPPNMGIDF*ASLRSP
Trigger: TGGGGACCTGAGGGATGCCCAGAAGTCAATCCCCAT...GTTTGGAGGTCTGCCAGTTACACCAAGTCCCCTCTGAGATTCGATCAGGGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000616201.4
CDS-3UTR TCA 90 bp ACTTGCATAAGAGCCGATGAGAAGAGGTTGCTCGCGTCTCTGCAGCCGCAGTGGAGGAGGTCATATCACTaGAGACATAAGGGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: TCIRADEKRLLASLQPQWRRSYH*RHKGGP
Trigger: TGGACCACCCTTATGTCTTCAGTGATATGACCTCCT...CCACTGCGGCTGCAGAGACGCGAGCAACCTCTTCTCATCGGCTCTTATGCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp AGTCCCCTGATCGAATCTCAGAGGGGACTTGGTGTAACTGGCAGACCTCCAAACTGCCAACCAGCAGGGTaGAGTAGGAGGTCATATCAC +
Preference number: 4 (lower is better)
Translates to: SPLIESQRGLGVTGRPPNCQPAG*SRRSYH
Trigger: GTGATATGACCTCCTACTTCACCCTGCTGGTTGGCA...GTTTGGAGGTCTGCCAGTTACACCAAGTCCCCTCTGAGATTCGATCAGGGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616933.4
CDS-3UTR TCA 90 bp TGGGAGGCGAATCCAGGAAAAGTTGGACCCTTGTCTCACCTCATCTCGGAAAAGCGTCGAGGGATGCAATaGGGATGCCAATCTCGCAGA +
Preference number: 4 (lower is better)
Translates to: WEANPGKVGPLSHLISEKRRGMQ*GCQSRR
Trigger: TCTGCGAGATTGGCATCCTCATTGCATCCCTCGACG...CTTTTCCGAGATGAGGTGAGACAAGGGTCCAACTTTTCCTGGATTCGCCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp TGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACAAACATGTAGCACATCGTCGAGGGATGCAATaGGGATGCCAATCTCGCAGA +
Preference number: 4 (lower is better)
Translates to: CPQQRLHCTGQIHKHVAHRRGMQ*GCQSRR
Trigger: TCTGCGAGATTGGCATCCTCATTGCATCCCTCGACG...ATGTGCTACATGTTTGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
CDS-3UTR TCA 90 bp CTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCTGTGGTGTTCAGAGGGTTAAATGCATCTGTTTaGGGATCTGGGAACGCTGCT +
Preference number: 4 (lower is better)
Translates to: LWNIQAPRRQDLAVVFRGLNASV*GSGNAA
Trigger: AGCAGCGTTCCCAGATCCTCAAACAGATGCATTTAA...CCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp TGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACAAACATGTAGCACATTGTCCTTGGTCCAGGTaGGATGCACCTTCTCCGGAT +
Preference number: 4 (lower is better)
Translates to: CPQQRLHCTGQIHKHVAHCPWSR*DAPSPD
Trigger: ATCCGGAGAAGGTGCATCTCACCTGGACCAAGGACA...ATGTGCTACATGTTTGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR TCA 90 bp GCCCCCAGCGGGAGAGCTCGACTATGGCGAGAAGTCTGTTGCGCTTCTAGTCACCAGGATGCGGCATACTaGACACTTACACTGAAAATT +
Preference number: 4 (lower is better)
Translates to: APSGRARLWREVCCASSHQDAAY*TLTLKI
Trigger: AATTTTCAGTGTAAGTGTTCAGTATGCCGCATCCTG...GTGACTAGAAGCGCAACAGACTTCTCGCCATAGTCGAGCTCTCCCGCTGGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp CTCTCCTTTTCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCAGGAAGAAGCTGCAGTaGCCGCCCGCCCGGCGCACA +
Preference number: 4 (lower is better)
Translates to: LSFSYWHKEHKINTEAGCRKKLQ*PPARRT
Trigger: TGTGCGCCGGGCGGGCGGGCACTGCAGCTTCTTCCT...GCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGAAAAGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR CCA 90 bp GAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGAACACTTACACTGAAGGTTGTTTAGCATGGTaGCGGCGCGGCCCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: EHKINTEAGCGILNTYTEGCLAW*RRGPWS
Trigger: GGACCAGGGGCCGCGCCGCCACCATGCTAAACAACC...TTCAGTGTAAGTGTTCAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR CCA 90 bp TCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGTGCCATCACCCGGGTTaGCTCCCCCATCGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: SYWHKEHKINTEAGCGILCHHPG*LPHRRP
Trigger: AGGACGGCGATGGGGGAGCCAACCCGGGTGATGGCA...CAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR CCA 90 bp TGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGAACACTGAAGGTGCCCATGCGTaGGGCCTGCACCGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: WHKEHKINTEAGCGILNTEGAHA*GLHRLL
Trigger: AAGAAGCCGGTGCAGGCCCCACGCATGGGCACCTTC...AGTGTTCAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR CCA 90 bp TCTACTGAAGGATGCAGGGGGCTGGTGTCTAACACCTCCAGCTTCCTGATTGAGCTGGGCCCAGAGACCTaGAAATCATGTAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: STEGCRGLVSNTSSFLIELGPET*KSCSRS
Trigger: GCTCCTACTACATGATTTCCAGGTCTCTGGGCCCAG...CTCAATCAGGAAGCTGGAGGTGTTAGACACCAGCCCCCTGCATCCTTCAGTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp GAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGAACACTTACACTGAATGCCATCCCTCGAGATaGCCTGCAGCAGGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: EHKINTEAGCGILNTYTECHPSR*PAAGVG
Trigger: CCCCACGCCTGCTGCAGGCCATCTCGAGGGATGGCA...TTCAGTGTAAGTGTTCAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CCGCCTGGGCCTAAAGCACTTTCGCTCTCAAACTCTTGGACGTCAAGGAAAATTGGGTGCACCACATTCTaGTCTTGGTCCACACGCACC +
Preference number: 4 (lower is better)
Translates to: PPGPKALSLSNSWTSRKIGCTTF*SWSTRT
Trigger: GGTGCGTGTGGACCAAGACCAGAATGTGGTGCACCC...AATTTTCCTTGACGTCCAAGAGTTTGAGAGCGAAAGTGCTTTAGGCCCAGGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CCGCCTGGGCCTAAAGCACTTTCGCTCTCAAACTCTTGGACGTCAAGGAAAATTGTCAGTGAGAGCAGCTaGGGGTGCACCACATTCTGG +
Preference number: 4 (lower is better)
Translates to: PPGPKALSLSNSWTSRKIVSESS*GCTTFW
Trigger: CCAGAATGTGGTGCACCCCCAGCTGCTCTCACTGAC...AATTTTCCTTGACGTCCAAGAGTTTGAGAGCGAAAGTGCTTTAGGCCCAGGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CAGGTGCTCTGTGAGGACCTCGAGAAACTCCATGTAGTTTTCATCACCATTGCGGTCAGTGAGAGCAGCTaGGGGTGCACCACATTCTGG +
Preference number: 4 (lower is better)
Translates to: QVLCEDLEKLHVVFITIAVSESS*GCTTFW
Trigger: CCAGAATGTGGTGCACCCCCAGCTGCTCTCACTGAC...CGCAATGGTGATGAAAACTACATGGAGTTTCTCGAGGTCCTCACAGAGCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR CCA 90 bp CTGTTTCATCAACGGAAACTTTGCTCTTGCCAACCAGACAATCTGGGCCCAGATTTCCCCGCCTTCAGCTaGGAGGTCAGTGAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LFHQRKLCSCQPDNLGPDFPAFS*EVSESS
Trigger: GCTGCTCTCACTGACCTCCCAGCTGAAGGCGGGGAA...ATCTGGGCCCAGATTGTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATGAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp GAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGAACACTTACACTGAACCGAGGCCCCCGGACTaGATCAGATGGGACACGCCA +
Preference number: 4 (lower is better)
Translates to: EHKINTEAGCGILNTYTEPRPPD*IRWDTP
Trigger: TGGCGTGTCCCATCTGATCCAGTCCGGGGGCCTCGG...TTCAGTGTAAGTGTTCAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CTGTTTCATCAACGGAAACTTTGCTCTTGCCAACCAGACAATCTGGGCCCAGATAGCTGCTGGGGCAGCTaGGAGCACTCTGATCGTGGA +
Preference number: 4 (lower is better)
Translates to: LFHQRKLCSCQPDNLGPDSCWGS*EHSDRG
Trigger: TCCACGATCAGAGTGCTCCCAGCTGCCCCAGCAGCT...ATCTGGGCCCAGATTGTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATGAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CTGTTTCATCAACGGAAACTTTGCTCTTGCCAACCAGACAATCTGGGCCCAGATTGGGAAGGGGAGGAATaGGCCGCATGGACTACCTGG +
Preference number: 4 (lower is better)
Translates to: LFHQRKLCSCQPDNLGPDWEGEE*AAWTTW
Trigger: CCAGGTAGTCCATGCGGCCCATTCCTCCCCTTCCCA...ATCTGGGCCCAGATTGTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATGAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp GCCTTCAGCTGGGAGGTCAGTGAGAGCAGCTGGGGGTGCACCACATTCTGGTCTTCGCTCTCAAACTCTTaGACGTCAAGGAAAATTCAG +
Preference number: 4 (lower is better)
Translates to: AFSWEVSESSWGCTTFWSSLSNS*TSRKIQ
Trigger: CTGAATTTTCCTTGACGTCCAAGAGTTTGAGAGCGA...AGACCAGAATGTGGTGCACCCCCAGCTGCTCTCACTGACCTCCCAGCTGAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR CCA 90 bp CTGTTTCATCAACGGAAACTTTGCTCTTGCCAACCAGACAATCTGGGCCCAGATACAGGAGCTGCCAGATaGGGACGGGGGAGGAACATC +
Preference number: 4 (lower is better)
Translates to: LFHQRKLCSCQPDNLGPDTGAAR*GRGRNI
Trigger: GATGTTCCTCCCCCGTCCCCATCTGGCAGCTCCTGT...ATCTGGGCCCAGATTGTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATGAAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp TCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACAAACACCATTGGCCTTGCCATaGCCAAAGACCTGGAAATCA +
Preference number: 4 (lower is better)
Translates to: SSWVSSAASALHRPDSQTPLALP*PKTWKS
Trigger: TGATTTCCAGGTCTTTGGCCATGGCAAGGCCAATGG...TGTTTGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539566.3
CDS-3UTR CCA 90 bp GGGAGGCGAATCCAGGAAAAGTTGGACCCTTGTCTCACCTCATCTCGGAAAAGGGAAGATGGCCATGGCTaGGAAGAGGTAAGCCAGCTA +
Preference number: 4 (lower is better)
Translates to: GRRIQEKLDPCLTSSRKREDGHG*EEVSQL
Trigger: TAGCTGGCTTACCTCTTCCCAGCCATGGCCATCTTC...CCTTTTCCGAGATGAGGTGAGACAAGGGTCCAACTTTTCCTGGATTCGCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR TCA 90 bp TGGGAGGCGAATCCAGGAAAAGTTGGACCCTTGTCTCACCTCATCTCGGAAAAGCATGATCCCTGTGACTaGGGGGAAGTAGATGCCAAC +
Preference number: 4 (lower is better)
Translates to: WEANPGKVGPLSHLISEKHDPCD*GEVDAN
Trigger: GTTGGCATCTACTTCCCCTCAGTCACAGGGATCATG...CTTTTCCGAGATGAGGTGAGACAAGGGTCCAACTTTTCCTGGATTCGCCTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp TGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACAAACATGTAGCACATCATGATCCCTGTGACTaGGGGGAAGTAGATGCCAAC +
Preference number: 4 (lower is better)
Translates to: CPQQRLHCTGQIHKHVAHHDPCD*GEVDAN
Trigger: GTTGGCATCTACTTCCCCTCAGTCACAGGGATCATG...ATGTGCTACATGTTTGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR TCA 90 bp CTTCCCAAGCCAGCTTGGCACAGACATCAAAGCCATGGCGAGACAGCGTGCGGTGCAGTGATGCGTAAATaGTACAGAAATGTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: LPKPAWHRHQSHGETACGAVMRK*YRNVVR
Trigger: TCTGACCACATTTCTGTATCATTTACGCATCACTGC...ACCGCACGCTGTCTCGCCATGGCTTTGATGTCTGTGCCAAGCTGGCTTGGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR TCA 90 bp AAGCGAGAGGAGCAGAAAAGGCCCCATAGCCGTGTGGTCACCGTCTCATTTCCTACACAAGATCAATACTaGGGCAGGATGCGGCATACT +
Preference number: 4 (lower is better)
Translates to: KREEQKRPHSRVVTVSFPTQDQY*GRMRHT
Trigger: AGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGT...AGGAAATGAGACGGTGACCACACGGCTATGGGGCCTTTTCTGCTCCTCTCGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR GCA 90 bp TTCTGCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCATTCGTTGCAATTaGACTCATGGAGATGGCCGT +
Preference number: 4 (lower is better)
Translates to: FCTAHHISSGIFRPPEGRTIRCN*THGDGR
Trigger: ACGGCCATCTCCATGAGTGCAATTGCAACGAATGGT...CCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGCAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp CTGTTTCATCAACGGAAACTTTGCTCTTGCCAACCAGACAATCTGGGCCCAGATGCAGGAAGGGCACAATaGCATCCCTCGAGATGGCCT +
Preference number: 4 (lower is better)
Translates to: LFHQRKLCSCQPDNLGPDAGRAQ*HPSRWP
Trigger: AGGCCATCTCGAGGGATGGCATTGTGCCCTTCCTGC...ATCTGGGCCCAGATTGTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATGAAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp TGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACAAACATGTAGCACATCAGCAGCGTCTGCACTaGACAGGCCAGATTCACAAA +
Preference number: 4 (lower is better)
Translates to: CPQQRLHCTGQIHKHVAHQQRLH*TGQIHK
Trigger: TTTGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTG...ATGTGCTACATGTTTGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
CDS-3UTR GCA 90 bp GGTGCTGGAACGAGCATGCAGTGCCTGACCCCCTTAGTAATGTGCCCTAGGGGATGGCGAGAAGTCTGTTaGGCTTCTAGTCACATAAAT +
Preference number: 4 (lower is better)
Translates to: GAGTSMQCLTPLVMCPRGWREVC*ASSHIN
Trigger: ATTTATGTGACTAGAAGCGCAACAGACTTCTCGCCA...TCCCCTAGGGCACATTACTAAGGGGGTCAGGCACTGCATGCTCGTTCCAGCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp CTGTTTCATCAACGGAAACTTTGCTCTTGCCAACCAGACAATCTGGGCCCAGATCCCAGTCCCAGATGGTaGTGGAACGAGCATGCAGTG +
Preference number: 4 (lower is better)
Translates to: LFHQRKLCSCQPDNLGPDPSPRW*WNEHAV
Trigger: CACTGCATGCTCGTTCCAGCACCATCTGGGACTGGG...ATCTGGGCCCAGATTGTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATGAAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp AGTCCCCTGATCGAATCTCAGAGGGGACTTGGTGTAACTGGCAGACCTCCAAACCGGAAACTTTGCTCTTaGCAACCAGACAATCTGGGC +
Preference number: 4 (lower is better)
Translates to: SPLIESQRGLGVTGRPPNRKLCS*QPDNLG
Trigger: GCCCAGATTGTCTGGTTGGCAAGAGCAAAGTTTCCG...GTTTGGAGGTCTGCCAGTTACACCAAGTCCCCTCTGAGATTCGATCAGGGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp GGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGTGCCTGACCATCAACGGAAACTTTaGTCTTGCCAACCAGACAAT +
Preference number: 4 (lower is better)
Translates to: GGTVPSPRWCWNEHAVPDHQRKL*SCQPDN
Trigger: ATTGTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATG...GTCAGGCACTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp GGTGCTGGAACGAGCATGCAGTGCCTGACCCCCTTAGTAATGTGCCCTAGGGGACATCAACGGAAACTTTaGTCTTGCCAACCAGACAAT +
Preference number: 4 (lower is better)
Translates to: GAGTSMQCLTPLVMCPRGHQRKL*SCQPDN
Trigger: ATTGTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATG...TCCCCTAGGGCACATTACTAAGGGGGTCAGGCACTGCATGCTCGTTCCAGCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp TCTCCTATTTACAAGGGTTTTCAACTTCATTGCATTGCCCTGCACATAGATCATCACGGAGGAAGAAGCTaGAGTGCCCGCCCGCCCGGC +
Preference number: 4 (lower is better)
Translates to: SPIYKGFQLHCIALHIDHHGGRS*SARPPG
Trigger: GCCGGGCGGGCGGGCACTGCAGCTTCTTCCTCCGTG...ATGATCTATGTGCAGGGCAATGCAATGAAGTTGAAAACCCTTGTAAATAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR CCA 90 bp TCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGTCAGGTTGTTTAGCATaGTGGCGGCGCGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: SYWHKEHKINTEAGCGILSGCLA*WRRGPW
Trigger: CCAGGGGCCGCGCCGCCACCATGCTAAACAACCTGA...CAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR CCA 90 bp TGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACAAACATGTAGCACATCAGAGGAGACAGGACTaGGGCCCTTATTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: CPQQRLHCTGQIHKHVAHQRRQD*GPYSSL
Trigger: CAGAGAAGAATAAGGGCCCCAGTCCTGTCTCCTCTG...ATGTGCTACATGTTTGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR CCA 90 bp TCTCCTATTTACAAGGGTTTTCAACTTCATTGCATTGCCCTGCACATAGATCATGCGCTCGGGCCCGGGTaGCAGGTCCTGGTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: SPIYKGFQLHCIALHIDHALGPG*QVLVLR
Trigger: CCTGAGAACCAGGACCTGCCACCCGGGCCCGAGCGC...ATGATCTATGTGCAGGGCAATGCAATGAAGTTGAAAACCCTTGTAAATAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp TCTCCTATTTACAAGGGTTTTCAACTTCATTGCATTGCCCTGCACATAGATCATGGCACTGAGGAGCTCTaGTCTCTGCGCGGCGGGGCG +
Preference number: 4 (lower is better)
Translates to: SPIYKGFQLHCIALHIDHGTEEL*SLRGGA
Trigger: CGCCCCGCCGCGCAGAGACCAGAGCTCCTCAGTGCC...ATGATCTATGTGCAGGGCAATGCAATGAAGTTGAAAACCCTTGTAAATAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp TCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGTCAGGGCCCTGGGGCTaGAGGTACTGTACCCAGTCC +
Preference number: 4 (lower is better)
Translates to: SYWHKEHKINTEAGCGILSGPWG*RYCTQS
Trigger: GGACTGGGTACAGTACCTCCAGCCCCAGGGCCCTGA...CAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp GTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCTCTGGGAGGTGCGTGAGATGTGTAGCACAGAAAACTTaGGTTTTTGTTGTGGGATGT +
Preference number: 4 (lower is better)
Translates to: VVRSGLLSGASSGRCVRCVAQKT*VFVVGC
Trigger: ACATCCCACAACAAAAACCCAAGTTTTCTGTGCTAC...ACATCTCACGCACCTCCCAGAGCTGGCGCCACTGAGTAATCCGGACCTCACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp AGTCCCCTGATCGAATCTCAGAGGGGACTTGGTGTAACTGGCAGACCTCCAAACTTTGGCGAGGAGCCATaGGATATGGGGATTGACTTC +
Preference number: 4 (lower is better)
Translates to: SPLIESQRGLGVTGRPPNFGEEP*DMGIDF
Trigger: GAAGTCAATCCCCATATCCCATGGCTCCTCGCCAAA...GTTTGGAGGTCTGCCAGTTACACCAAGTCCCCTCTGAGATTCGATCAGGGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616201.4
CDS-3UTR TCA 90 bp TGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGAACACTTCATGGAGATGGCCGTaGGCATCGTACAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: WHKEHKINTEAGCGILNTSWRWP*ASYRSS
Trigger: GCTGCTCCTGTACGATGCTCACGGCCATCTCCATGA...AGTGTTCAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR TCA 90 bp CCGCCTGGGCCTAAAGCACTTTCGCTCTCAAACTCTTGGACGTCAAGGAAAATTTGCCAACCAGCAGGGTaGAGTAGGAGGTCATATCAC +
Preference number: 4 (lower is better)
Translates to: PPGPKALSLSNSWTSRKICQPAG*SRRSYH
Trigger: GTGATATGACCTCCTACTTCACCCTGCTGGTTGGCA...AATTTTCCTTGACGTCCAAGAGTTTGAGAGCGAAAGTGCTTTAGGCCCAGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp ACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCAGGATGCGGCATACTaGACACTTACACTGAAAATT +
Preference number: 4 (lower is better)
Translates to: TAHHISSGIFRPPEGRTWQDAAY*TLTLKI
Trigger: AATTTTCAGTGTAAGTGTTCAGTATGCCGCATCCTG...CCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR TCA 90 bp TCCCCTATCCTGGCCCCAACTTGCATAAGAGCCGATGAGAAGAGGTTGCTCGCGCAGGATGCGGCATACTaGACACTTACACTGAAAATT +
Preference number: 4 (lower is better)
Translates to: SPILAPTCIRADEKRLLAQDAAY*TLTLKI
Trigger: AATTTTCAGTGTAAGTGTTCAGTATGCCGCATCCTG...CGCGAGCAACCTCTTCTCATCGGCTCTTATGCAAGTTGGGGCCAGGATAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp CTTGGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCCACAACACCATTCGTTaGAATTGCACTCATGGAGAT +
Preference number: 4 (lower is better)
Translates to: LGLKGKEVVRSGLLSGASHNTIR*NCTHGD
Trigger: ATCTCCATGAGTGCAATTGCAACGAATGGTGTTGTG...GCTGGCGCCACTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp GAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGAACACTTACACTGAACATCACCATTGCGGTTaGGGGGAGGCCCAGGCATGT +
Preference number: 4 (lower is better)
Translates to: EHKINTEAGCGILNTYTEHHHCG*GEAQAC
Trigger: ACATGCCTGGGCCTCCCCGCAACCGCAATGGTGATG...TTCAGTGTAAGTGTTCAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp GCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTTGGCGAGAAGTCTGTTaGGCTTCTAGTCACATAAAT +
Preference number: 4 (lower is better)
Translates to: AQPITSALEYSGPQKAGPWREVC*ASSHIN
Trigger: ATTTATGTGACTAGAAGCGCAACAGACTTCTCGCCA...AGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp TACAGCCCCCTTCTGCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCCATCAACGGAAACTTTaGTCTTGCCAACCAGACAAT +
Preference number: 4 (lower is better)
Translates to: YSPLLHSPSHQLWNIQAPHQRKL*SCQPDN
Trigger: ATTGTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATG...GGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGCAGAAGGGGGCTGTA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp CTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCTGTGGTGTTCAGAGGGTCAACTTCATTGCATTaGCCTGCACATAGATCATCT +
Preference number: 4 (lower is better)
Translates to: LWNIQAPRRQDLAVVFRGSTSLH*PAHRSS
Trigger: AGATGATCTATGTGCAGGGCAATGCAATGAAGTTGA...CCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp TTACTCAGTGGCGCCAGCTCTGGGAGGTGCGTGAGATGTCAAGCTAGGTGCGCAGGTTTTCAACTTCATTaGATTGCCCTGCACATAGAT +
Preference number: 4 (lower is better)
Translates to: LLSGASSGRCVRCQARCAGFQLH*IALHID
Trigger: ATCTATGTGCAGGGCAATGCAATGAAGTTGAAAACC...TGCGCACCTAGCTTGACATCTCACGCACCTCCCAGAGCTGGCGCCACTGAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp TTTTCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATATGCCATCCCTCGAGATaGCCTGCAGCAGGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: FSYWHKEHKINTEAGCGICHPSR*PAAGVG
Trigger: CCCCACGCCTGCTGCAGGCCATCTCGAGGGATGGCA...TATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp TGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGAACACTCAGCACCAGCAGCTGTaGCCTCCAGTTCTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: WHKEHKINTEAGCGILNTQHQQL*PPVLGV
Trigger: CACACCAAGAACTGGAGGCCACAGCTGCTGGTGCTG...AGTGTTCAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp TCTCCTATTTACAAGGGTTTTCAACTTCATTGCATTGCCCTGCACATAGATCATCATCACGGGCGGCTCTaGGGCCTCTCAGTGGGTCCG +
Preference number: 4 (lower is better)
Translates to: SPIYKGFQLHCIALHIDHHHGRL*GLSVGP
Trigger: CGGACCCACTGAGAGGCCCCAGAGCCGCCCGTGATG...ATGATCTATGTGCAGGGCAATGCAATGAAGTTGAAAACCCTTGTAAATAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp CTGTTTCATCAACGGAAACTTTGCTCTTGCCAACCAGACAATCTGGGCCCAGATAGTCCCAGATGGTGCTaGAACGAGCATGCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: LFHQRKLCSCQPDNLGPDSPRWC*NEHAVP
Trigger: AGGCACTGCATGCTCGTTCCAGCACCATCTGGGACT...ATCTGGGCCCAGATTGTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATGAAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp TGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACAAACATGTAGCACATCCATCACATCAGCTCTaGAATATTCAGGCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: CPQQRLHCTGQIHKHVAHPSHQL*NIQAPR
Trigger: TCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGG...ATGTGCTACATGTTTGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616933.4
3UTR CAA 72 bp ACATTGTTTCGGGTGAAGTATTCATCACAGGTGGCGTaGAGGAAGCGAGAGGAGCAGAAAAGGCCCCATAGC +
Preference number: 4 (lower is better)
Translates to: TLFRVKYSSQVA*RKREEQKRPHS
Trigger: GCTATGGGGCCTTTTCTGCTCCTCTCGCTTCCTCAACGCCACCTGTGATGAATACTTCACCCGAAACAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR TCA 90 bp TCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGCAGTGGCCATGCAGGTaGGCACACAGGTGCCGTAAA +
Preference number: 4 (lower is better)
Translates to: SYWHKEHKINTEAGCGILQWPCR*AHRCRK
Trigger: TTTACGGCACCTGTGTGCTCACCTGCATGGCCACTG...CAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616933.4
CDS-3UTR TCA 90 bp TCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGCATCACAGGTGGCGTTaGGGAAGCGAGAGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: SYWHKEHKINTEAGCGILHHRWR*GSERSR
Trigger: TCTGCTCCTCTCGCTTCCTCAACGCCACCTGTGATG...CAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616933.4
CDS-3UTR TCA 90 bp TGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGAACACTTCGGTTTCTTCCTCTTaGGGAGCACCCCTCCCCTAT +
Preference number: 4 (lower is better)
Translates to: WHKEHKINTEAGCGILNTSVSSS*GAPLPY
Trigger: ATAGGGGAGGGGTGCTCCTCAAGAGGAAGAAACCGA...AGTGTTCAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp TCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGTGCTTTCCTTGGGGTTaGCATCACCCGGGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: SYWHKEHKINTEAGCGILCFPWG*HHPGWL
Trigger: GAGCCAACCCGGGTGATGGCAACCCCAAGGAAAGCA...CAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR GCA 90 bp GGGTGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACAAACATGTAGCACACAACACCATTCGTTaGAATTGCACTCATGGAGAT +
Preference number: 4 (lower is better)
Translates to: GCPQQRLHCTGQIHKHVAHNTIR*NCTHGD
Trigger: ATCTCCATGAGTGCAATTGCAACGAATGGTGTTGTG...TGCTACATGTTTGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
CDS-3UTR GCA 90 bp TGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGAACACTGCTCTCCATTGGCCTTaGCATGGCCAAAGACCTGCA +
Preference number: 4 (lower is better)
Translates to: WHKEHKINTEAGCGILNTALHWP*HGQRPA
Trigger: TGCAGGTCTTTGGCCATGGCAAGGCCAATGGAGAGC...AGTGTTCAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp ACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGTCAACTTCATTGCATTaGCCTGCACATAGATCATCT +
Preference number: 4 (lower is better)
Translates to: TAHHISSGIFRPPEGRTWSTSLH*PAHRSS
Trigger: AGATGATCTATGTGCAGGGCAATGCAATGAAGTTGA...CCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp GCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGTTTTCAACTTCATTaGATTGCCCTGCACATAGAT +
Preference number: 4 (lower is better)
Translates to: AQPITSALEYSGPQKAGPGFQLH*IALHID
Trigger: ATCTATGTGCAGGGCAATGCAATGAAGTTGAAAACC...AGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp GGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCTCTGGTTTTCAACTTCATTaGATTGCCCTGCACATAGAT +
Preference number: 4 (lower is better)
Translates to: GLKGKEVVRSGLLSGASSGFQLH*IALHID
Trigger: ATCTATGTGCAGGGCAATGCAATGAAGTTGAAAACC...AGAGCTGGCGCCACTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp TCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGAGGGACTGCTTTCCTTaGGGTTGCCATCACCCGGGT +
Preference number: 4 (lower is better)
Translates to: SYWHKEHKINTEAGCGILRDCFP*GCHHPG
Trigger: ACCCGGGTGATGGCAACCCCAAGGAAAGCAGTCCCT...CAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR CCA 90 bp GAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGAACACTTACACTGAAAGGGACTGCTTTCCTTaGGGTTGCCATCACCCGGGT +
Preference number: 4 (lower is better)
Translates to: EHKINTEAGCGILNTYTERDCFP*GCHHPG
Trigger: ACCCGGGTGATGGCAACCCCAAGGAAAGCAGTCCCT...TTCAGTGTAAGTGTTCAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR CCA 90 bp GAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGAACACTTACACTGAACGCCATCACGCAAGTTaGAGGAGATCACCACCTGGC +
Preference number: 4 (lower is better)
Translates to: EHKINTEAGCGILNTYTERHHAS*RRSPPG
Trigger: GCCAGGTGGTGATCTCCTCCAACTTGCGTGATGGCG...TTCAGTGTAAGTGTTCAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CTCTCCTTTTCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCACAGGAGCTGCCAGATaGGGACGGGGGAGGAACATC +
Preference number: 4 (lower is better)
Translates to: LSFSYWHKEHKINTEAGCTGAAR*GRGRNI
Trigger: GATGTTCCTCCCCCGTCCCCATCTGGCAGCTCCTGT...GCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGAAAAGGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp CTGTTTCATCAACGGAAACTTTGCTCTTGCCAACCAGACAATCTGGGCCCAGATGCTCCAGCTCTGCCTTaGGCTCAAAGGAAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: LFHQRKLCSCQPDNLGPDAPALP*AQRKRG
Trigger: ACCTCTTTTCCTTTGAGCCCAAGGCAGAGCTGGAGC...ATCTGGGCCCAGATTGTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATGAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp GCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGTAGCACAGAAAACTTaGGTTTTTGTTGTGGGATGT +
Preference number: 4 (lower is better)
Translates to: AQPITSALEYSGPQKAGPVAQKT*VFVVGC
Trigger: ACATCCCACAACAAAAACCCAAGTTTTCTGTGCTAC...AGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
3UTR CAA 72 bp TCTGTGATACTCTGGATCTCCCGCTCCCGCTCATTCTaGGTTAAATGCATCTGTTTGAGGATCTGGGAACGC +
Preference number: 4 (lower is better)
Translates to: SVILWISRSRSF*VKCICLRIWER
Trigger: GCGTTCCCAGATCCTCAAACAGATGCATTTAACCAAGAATGAGCGGGAGCGGGAGATCCAGAGTATCACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR TCA 90 bp GAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGAACACTTACACTGAATGCAGAAGGACTCCATaGTGCCTGCAATGCCCACCA +
Preference number: 4 (lower is better)
Translates to: EHKINTEAGCGILNTYTECRRTP*CLQCPP
Trigger: TGGTGGGCATTGCAGGCATCATGGAGTCCTTCTGCA...TTCAGTGTAAGTGTTCAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR TCA 90 bp CTCTCCTTTTCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCCAGTGGCCATGCAGGTaGGCACACAGGTGCCGTAAA +
Preference number: 4 (lower is better)
Translates to: LSFSYWHKEHKINTEAGCQWPCR*AHRCRK
Trigger: TTTACGGCACCTGTGTGCTCACCTGCATGGCCACTG...GCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGAAAAGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616933.4
CDS-3UTR TCA 90 bp TGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGAACACTCTCGTGACTCATCTGTaGTACTCTGGATCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: WHKEHKINTEAGCGILNTLVTHL*YSGSPA
Trigger: AGCGGGAGATCCAGAGTATCACAGATGAGTCACGAG...AGTGTTCAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp CTCTCCTTTTCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCTGCTTTCCTTGGGGTTaGCATCACCCGGGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: LSFSYWHKEHKINTEAGCCFPWG*HHPGWL
Trigger: GAGCCAACCCGGGTGATGGCAACCCCAAGGAAAGCA...GCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGAAAAGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR GCA 90 bp GAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGAACACTTACACTGAACCCACTGGCATCTTCTaGCTTGAAGATGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: EHKINTEAGCGILNTYTEPTGIF*LEDGHG
Trigger: GCCATGGCCATCTTCAAGGCAGAAGATGCCAGTGGG...TTCAGTGTAAGTGTTCAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616933.4
CDS-3UTR GCA 90 bp GAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGAACACTTACACTGAATCCACCAAACGTCGATaGTGCCCTCAGAGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: EHKINTEAGCGILNTYTESTKRR*CPQRSA
Trigger: AGCGCTTCTCTGAGGGCAGCATCGACGTTTGGTGGA...TTCAGTGTAAGTGTTCAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp CTGTTTCATCAACGGAAACTTTGCTCTTGCCAACCAGACAATCTGGGCCCAGATCTTCCCAAGCCAGCTTaGCACAGACATCAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: LFHQRKLCSCQPDNLGPDLPKPA*HRHQSH
Trigger: ATGGCTTTGATGTCTGTGCCAAGCTGGCTTGGGAAG...ATCTGGGCCCAGATTGTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATGAAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616933.4
CDS-3UTR CCA 90 bp TCTCCTTTTCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGCCGGGTGGCAGGTCCTaGTTCTCAGGAGTAGATGGT +
Preference number: 4 (lower is better)
Translates to: SPFHIGTKNTRSILRQDAPGGRS*FSGVDG
Trigger: ACCATCTACTCCTGAGAACCAGGACCTGCCACCCGG...CGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGAAAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp AATACTCTTGATTTGGTTTGCAACCTCTCCTATTTACAAGGGTTTTCAACTTCACATCACGGGCGGCTCTaGGGCCTCTCAGTGGGTCCG +
Preference number: 4 (lower is better)
Translates to: NTLDLVCNLSYLQGFSTSHHGRL*GLSVGP
Trigger: CGGACCCACTGAGAGGCCCCAGAGCCGCCCGTGATG...TGAAGTTGAAAACCCTTGTAAATAGGAGAGGTTGCAAACCAAATCAAGAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp TCTCCTTTTCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGCGCCAGCTCCAGCTCTaGCTTGGGCTCAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: SPFHIGTKNTRSILRQDARQLQL*LGLKGK
Trigger: TTTTCCTTTGAGCCCAAGGCAGAGCTGGAGCTGGCG...CGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGAAAAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp GCACATAGATCATCTAAAACAAAAGCAACACTAGTTATCACTACAAGGCTATTGGGTTGTTTAGCATGGTaGCGGCGCGGCCCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: AHRSSKTKATLVITTRLLGCLAW*RRGPWS
Trigger: GGACCAGGGGCCGCGCCGCCACCATGCTAAACAACC...CAATAGCCTTGTAGTGATAACTAGTGTTGCTTTTGTTTTAGATGATCTATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR CCA 90 bp TCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGCAGACATCAAAGCCATaGCGAGACAGCGTGCGGTTA +
Preference number: 4 (lower is better)
Translates to: SYWHKEHKINTEAGCGILQTSKP*RDSVRL
Trigger: TAACCGCACGCTGTCTCGCCATGGCTTTGATGTCTG...CAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616933.4
CDS-3UTR CCA 90 bp TCTCCTTTTCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGCCATTGGCCTTGCCATaGCCAAAGACCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SPFHIGTKNTRSILRQDAPLALP*PKTCRK
Trigger: CTTCCTGCAGGTCTTTGGCCATGGCAAGGCCAATGG...CGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGAAAAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp GCACATAGATCATCTAAAACAAAAGCAACACTAGTTATCACTACAAGGCTATTGCACGGAGAAGGCGGCTaGGTCCCTCAGGCGAGACAG +
Preference number: 4 (lower is better)
Translates to: AHRSSKTKATLVITTRLLHGEGG*VPQARQ
Trigger: CTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTG...CAATAGCCTTGTAGTGATAACTAGTGTTGCTTTTGTTTTAGATGATCTATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp GCACATAGATCATCTAAAACAAAAGCAACACTAGTTATCACTACAAGGCTATTGCGCCTCAGACCAGGCTaGTGGAGCGGAAGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: AHRSSKTKATLVITTRLLRLRPG*WSGRAK
Trigger: CTTGGCCCTTCCGCTCCACCAGCCTGGTCTGAGGCG...CAATAGCCTTGTAGTGATAACTAGTGTTGCTTTTGTTTTAGATGATCTATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp TCTCCTTTTCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGTACCCAGTCCCAGATaGTGCTGGAACGAGCATGCA +
Preference number: 4 (lower is better)
Translates to: SPFHIGTKNTRSILRQDAVPSPR*CWNEHA
Trigger: TGCATGCTCGTTCCAGCACCATCTGGGACTGGGTAC...CGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGAAAAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp TCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGATCTCAGAGGGGACTTaGTGTAACTGGCAGACCTCC +
Preference number: 4 (lower is better)
Translates to: SYWHKEHKINTEAGCGILISEGT*CNWQTS
Trigger: GGAGGTCTGCCAGTTACACCAAGTCCCCTCTGAGAT...CAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR TCA 90 bp TCTCCTATTTACAAGGGTTTTCAACTTCATTGCATTGCCCTGCACATAGATCATTCATGGAGATGGCCGTaGGCATCGTACAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SPIYKGFQLHCIALHIDHSWRWP*ASYRSS
Trigger: GCTGCTCCTGTACGATGCTCACGGCCATCTCCATGA...ATGATCTATGTGCAGGGCAATGCAATGAAGTTGAAAACCCTTGTAAATAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR TCA 90 bp CCGCCTGGGCCTAAAGCACTTTCGCTCTCAAACTCTTGGACGTCAAGGAAAATTGCAGTGATGCGTAAATaGTACAGAAATGTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: PPGPKALSLSNSWTSRKIAVMRK*YRNVVR
Trigger: TCTGACCACATTTCTGTATCATTTACGCATCACTGC...AATTTTCCTTGACGTCCAAGAGTTTGAGAGCGAAAGTGCTTTAGGCCCAGGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp TCTCCTATTTACAAGGGTTTTCAACTTCATTGCATTGCCCTGCACATAGATCATGGGATTTCTTCACGATaGCCTCGTTCAGCCGCACGG +
Preference number: 4 (lower is better)
Translates to: SPIYKGFQLHCIALHIDHGISSR*PRSAAR
Trigger: CCGTGCGGCTGAACGAGGTCATCGTGAAGAAATCCC...ATGATCTATGTGCAGGGCAATGCAATGAAGTTGAAAACCCTTGTAAATAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp GGGAGGCGAATCCAGGAAAAGTTGGACCCTTGTCTCACCTCATCTCGGAAAAGGTCATTCTTGGTTAAATaGATCTGTTTGAGGATCTGG +
Preference number: 4 (lower is better)
Translates to: GRRIQEKLDPCLTSSRKRSFLVK*ICLRIW
Trigger: CCAGATCCTCAAACAGATGCATTTAACCAAGAATGA...CCTTTTCCGAGATGAGGTGAGACAAGGGTCCAACTTTTCCTGGATTCGCCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp GCACATAGATCATCTAAAACAAAAGCAACACTAGTTATCACTACAAGGCTATTGTCAGGTTGTTTAGCATaGTGGCGGCGCGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: AHRSSKTKATLVITTRLLSGCLA*WRRGPW
Trigger: CCAGGGGCCGCGCCGCCACCATGCTAAACAACCTGA...CAATAGCCTTGTAGTGATAACTAGTGTTGCTTTTGTTTTAGATGATCTATGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR CCA 90 bp GCACATAGATCATCTAAAACAAAAGCAACACTAGTTATCACTACAAGGCTATTGGGGCCAAGGATGAGCTaGGGAAGCCAAAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: AHRSSKTKATLVITTRLLGPRMS*GSQRPW
Trigger: CCAGGGCCTTTGGCTTCCCCAGCTCATCCTTGGCCC...CAATAGCCTTGTAGTGATAACTAGTGTTGCTTTTGTTTTAGATGATCTATGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp GCACATAGATCATCTAAAACAAAAGCAACACTAGTTATCACTACAAGGCTATTGACACCTGACGCTGTCTaGGTGGCGCCAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: AHRSSKTKATLVITTRLLTPDAV*VAPAPA
Trigger: AGCTGGAGCTGGCGCCACCCAGACAGCGTCAGGTGT...CAATAGCCTTGTAGTGATAACTAGTGTTGCTTTTGTTTTAGATGATCTATGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR TCA 90 bp GCACATAGATCATCTAAAACAAAAGCAACACTAGTTATCACTACAAGGCTATTGCAGCTGGGAGCACTCTaGTCGTGGATCAGCTGCACC +
Preference number: 4 (lower is better)
Translates to: AHRSSKTKATLVITTRLLQLGAL*SWISCT
Trigger: GGTGCAGCTGATCCACGATCAGAGTGCTCCCAGCTG...CAATAGCCTTGTAGTGATAACTAGTGTTGCTTTTGTTTTAGATGATCTATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp CTCTCCTTTTCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGCCCTTATTCTTCTCTaGCACCGACTTGTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: LSFSYWHKEHKINTEAGCALILL*HRLVLG
Trigger: ACCAAGGACAAGTCGGTGGCAGAGAAGAATAAGGGC...GCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGAAAAGGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp TCTCCTTTTCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCACCAGGGATGCCCTaGATCTCTGTGACATTGTTT +
Preference number: 4 (lower is better)
Translates to: SPFHIGTKNTRSILRQDAAPGMP*ISVTLF
Trigger: AAACAATGTCACAGAGATCCAGGGCATCCCTGGTGC...CGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGAAAAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616933.4
CDS-3UTR CCA 90 bp GCACATAGATCATCTAAAACAAAAGCAACACTAGTTATCACTACAAGGCTATTGGTCCGGATTACTCAGTaGCGCCAGCTCTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: AHRSSKTKATLVITTRLLVRITQ*RQLWEV
Trigger: CACCTCCCAGAGCTGGCGCCACTGAGTAATCCGGAC...CAATAGCCTTGTAGTGATAACTAGTGTTGCTTTTGTTTTAGATGATCTATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp TTTTCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATAATCTCAGAGGGGACTTaGTGTAACTGGCAGACCTCC +
Preference number: 4 (lower is better)
Translates to: FSYWHKEHKINTEAGCGIISEGT*CNWQTS
Trigger: GGAGGTCTGCCAGTTACACCAAGTCCCCTCTGAGAT...TATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp TGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGAACACTCACAACACCATTCGTTaGAATTGCACTCATGGAGAT +
Preference number: 4 (lower is better)
Translates to: WHKEHKINTEAGCGILNTHNTIR*NCTHGD
Trigger: ATCTCCATGAGTGCAATTGCAACGAATGGTGTTGTG...AGTGTTCAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR GCA 90 bp TCTCCTATTTACAAGGGTTTTCAACTTCATTGCATTGCCCTGCACATAGATCATAGGATCTGGGAACGCTaGTCCATCACCAACGTCTTC +
Preference number: 4 (lower is better)
Translates to: SPIYKGFQLHCIALHIDHRIWER*SITNVF
Trigger: GAAGACGTTGGTGATGGAGCAGCGTTCCCAGATCCT...ATGATCTATGTGCAGGGCAATGCAATGAAGTTGAAAACCCTTGTAAATAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp TCTCCTATTTACAAGGGTTTTCAACTTCATTGCATTGCCCTGCACATAGATCATCTGGGCCCAGAGACCTaGAAATCATGTAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: SPIYKGFQLHCIALHIDHLGPET*KSCSRS
Trigger: GCTCCTACTACATGATTTCCAGGTCTCTGGGCCCAG...ATGATCTATGTGCAGGGCAATGCAATGAAGTTGAAAACCCTTGTAAATAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp GCACATAGATCATCTAAAACAAAAGCAACACTAGTTATCACTACAAGGCTATTGCGCCATCACGCAAGTTaGAGGAGATCACCACCTGGC +
Preference number: 4 (lower is better)
Translates to: AHRSSKTKATLVITTRLLRHHAS*RRSPPG
Trigger: GCCAGGTGGTGATCTCCTCCAACTTGCGTGATGGCG...CAATAGCCTTGTAGTGATAACTAGTGTTGCTTTTGTTTTAGATGATCTATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp GCACATAGATCATCTAAAACAAAAGCAACACTAGTTATCACTACAAGGCTATTGCCAGAAGGCAGGACCTaGCTGTGGTGTTCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: AHRSSKTKATLVITTRLLPEGRT*LWCSEG
Trigger: TCCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGG...CAATAGCCTTGTAGTGATAACTAGTGTTGCTTTTGTTTTAGATGATCTATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp TCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGGCCAACCAGACAATCTaGAAATCATGTAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: SYWHKEHKINTEAGCGILANQTI*KSCSRS
Trigger: GCTCCTACTACATGATTTCCAGATTGTCTGGTTGGC...CAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626937.2
CDS-3UTR TCA 90 bp TCTCCTATTTACAAGGGTTTTCAACTTCATTGCATTGCCCTGCACATAGATCATCCTCGACCTCCGCAGTaGTGCGTAAATGATACAGAA +
Preference number: 4 (lower is better)
Translates to: SPIYKGFQLHCIALHIDHPRPPQ*CVNDTE
Trigger: TTCTGTATCATTTACGCATCACTGCGGAGGTCGAGG...ATGATCTATGTGCAGGGCAATGCAATGAAGTTGAAAACCCTTGTAAATAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp TTTTCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATAACACAAGATCAATACTaGGGCAGGATGCGGCATACT +
Preference number: 4 (lower is better)
Translates to: FSYWHKEHKINTEAGCGITQDQY*GRMRHT
Trigger: AGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGT...TATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR GCA 90 bp TCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGCACAACACCATTCGTTaGAATTGCACTCATGGAGAT +
Preference number: 4 (lower is better)
Translates to: SYWHKEHKINTEAGCGILHNTIR*NCTHGD
Trigger: ATCTCCATGAGTGCAATTGCAACGAATGGTGTTGTG...CAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR GCA 90 bp TTTTCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATAGAGCATGGCTACCAGTaGATAATACCAGGAGCAGAT +
Preference number: 4 (lower is better)
Translates to: FSYWHKEHKINTEAGCGIEHGYQ*IIPGAD
Trigger: ATCTGCTCCTGGTATTATGCACTGGTAGCCATGCTC...TATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR GCA 90 bp TCTCCTATTTACAAGGGTTTTCAACTTCATTGCATTGCCCTGCACATAGATCATCGGAAACTTTGCTCTTaGCAACCAGACAATCTGGGC +
Preference number: 4 (lower is better)
Translates to: SPIYKGFQLHCIALHIDHRKLCS*QPDNLG
Trigger: GCCCAGATTGTCTGGTTGGCAAGAGCAAAGTTTCCG...ATGATCTATGTGCAGGGCAATGCAATGAAGTTGAAAACCCTTGTAAATAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR GCA 90 bp TCTCCTTTTCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGCGGAAACTTTGCTCTTaGCAACCAGACAATCTGGAA +
Preference number: 4 (lower is better)
Translates to: SPFHIGTKNTRSILRQDARKLCS*QPDNLE
Trigger: TTCCAGATTGTCTGGTTGGCAAGAGCAAAGTTTCCG...CGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGAAAAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626937.2
CDS-3UTR CCA 90 bp GCACATAGATCATCTAAAACAAAAGCAACACTAGTTATCACTACAAGGCTATTGGAAGATGGCCATGGCTaGGAAGAGGTAAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: AHRSSKTKATLVITTRLLEDGHG*EEVSQQ
Trigger: CTGCTGGCTTACCTCTTCCCAGCCATGGCCATCTTC...CAATAGCCTTGTAGTGATAACTAGTGTTGCTTTTGTTTTAGATGATCTATGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616201.4
CDS-3UTR CCA 90 bp TTTTCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACACAATTTCAGTCTTTaGCGAGGAGCCATGGGATAC +
Preference number: 4 (lower is better)
Translates to: FSYWHKEHKINTEAGCGIHNFSL*RGAMGY
Trigger: GTATCCCATGGCTCCTCGCCAAAGACTGAAATTGTG...TATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616202.4
ENST00000616933.4
CDS-3UTR TCA 90 bp AATACTCTTGATTTGGTTTGCAACCTCTCCTATTTACAAGGGTTTTCAACTTCACATGATCCCTGTGACTaGGGGGAAGTAGATGCCAAC +
Preference number: 4 (lower is better)
Translates to: NTLDLVCNLSYLQGFSTSHDPCD*GEVDAN
Trigger: GTTGGCATCTACTTCCCCTCAGTCACAGGGATCATG...TGAAGTTGAAAACCCTTGTAAATAGGAGAGGTTGCAAACCAAATCAAGAGTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616933.4
CDS-3UTR TCA 90 bp TCTCCTATTTACAAGGGTTTTCAACTTCATTGCATTGCCCTGCACATAGATCATCTCATAGGTGTAAGCTaGGATGTCGCTCTCATGCAT +
Preference number: 4 (lower is better)
Translates to: SPIYKGFQLHCIALHIDHLIGVS*DVALMH
Trigger: ATGCATGAGAGCGACATCTCAGCTTACACCTATGAG...ATGATCTATGTGCAGGGCAATGCAATGAAGTTGAAAACCCTTGTAAATAGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp TCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGACTGAACACTTACACTaGAAATTAAAGGCAGGCCTA +
Preference number: 4 (lower is better)
Translates to: SYWHKEHKINTEAGCGILTEHLH*KLKAGL
Trigger: TAGGCCTGCCTTTAATTTTCAGTGTAAGTGTTCAGT...CAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR TCA 90 bp GAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGAACACTTACACTGAAACTGAACACTTACACTaGAAATTAAAGGCAGGCCTA +
Preference number: 4 (lower is better)
Translates to: EHKINTEAGCGILNTYTETEHLH*KLKAGL
Trigger: TAGGCCTGCCTTTAATTTTCAGTGTAAGTGTTCAGT...TTCAGTGTAAGTGTTCAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR GCA 90 bp TCTCCTTTTCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGCACAACACCATTCGTTaGAATTGCACTCATGGAGAT +
Preference number: 4 (lower is better)
Translates to: SPFHIGTKNTRSILRQDAHNTIR*NCTHGD
Trigger: ATCTCCATGAGTGCAATTGCAACGAATGGTGTTGTG...CGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGAAAAGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR CCA 90 bp AATACTCTTGATTTGGTTTGCAACCTCTCCTATTTACAAGGGTTTTCAACTTCACAGAGGAGACAGGACTaGGGCCCTTATTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: NTLDLVCNLSYLQGFSTSQRRQD*GPYSSL
Trigger: CAGAGAAGAATAAGGGCCCCAGTCCTGTCTCCTCTG...TGAAGTTGAAAACCCTTGTAAATAGGAGAGGTTGCAAACCAAATCAAGAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp GAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGAACACTTACACTGAAGTAGCACAGAAAACTTaGGTTTTTGTTGTGGGATGT +
Preference number: 4 (lower is better)
Translates to: EHKINTEAGCGILNTYTEVAQKT*VFVVGC
Trigger: ACATCCCACAACAAAAACCCAAGTTTTCTGTGCTAC...TTCAGTGTAAGTGTTCAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR CCA 90 bp TTTTCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACACAATTTCAGTCTTTaGCGAGGAGCCATGGGATAT +
Preference number: 4 (lower is better)
Translates to: FSYWHKEHKINTEAGCGIHNFSL*RGAMGY
Trigger: ATATCCCATGGCTCCTCGCCAAAGACTGAAATTGTG...TATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616201.4
CDS-3UTR TCA 90 bp AATACTCTTGATTTGGTTTGCAACCTCTCCTATTTACAAGGGTTTTCAACTTCATACAGGAGCAGCAGATaGACACCATGCAGAAGGACT +
Preference number: 4 (lower is better)
Translates to: NTLDLVCNLSYLQGFSTSYRSSR*TPCRRT
Trigger: AGTCCTTCTGCATGGTGTTCATCTGCTGCTCCTGTA...TGAAGTTGAAAACCCTTGTAAATAGGAGAGGTTGCAAACCAAATCAAGAGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR TCA 90 bp CTCTCCTTTTCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCACTGAACACTTACACTaGAAATTAAAGGCAGGCCTA +
Preference number: 4 (lower is better)
Translates to: LSFSYWHKEHKINTEAGCTEHLH*KLKAGL
Trigger: TAGGCCTGCCTTTAATTTTCAGTGTAAGTGTTCAGT...GCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGAAAAGGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR GCA 90 bp GCACATAGATCATCTAAAACAAAAGCAACACTAGTTATCACTACAAGGCTATTGATCCTGGCCCCAACTTaGATAAGAGCCGATGAGAAG +
Preference number: 4 (lower is better)
Translates to: AHRSSKTKATLVITTRLLILAPT*IRADEK
Trigger: CTTCTCATCGGCTCTTATGCAAGTTGGGGCCAGGAT...CAATAGCCTTGTAGTGATAACTAGTGTTGCTTTTGTTTTAGATGATCTATGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CCA 90 bp GCACATAGATCATCTAAAACAAAAGCAACACTAGTTATCACTACAAGGCTATTGGATGACAATTACCCATaGAGATGGCCAGGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: AHRSSKTKATLVITTRLLDDNYP*RWPGQS
Trigger: ACTCTGGCCTGGCCATCTCCATGGGTAATTGTCATC...CAATAGCCTTGTAGTGATAACTAGTGTTGCTTTTGTTTTAGATGATCTATGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR TCA 90 bp TCTCCTATTTACAAGGGTTTTCAACTTCATTGCATTGCCCTGCACATAGATCATCAGGATGCGGCATACTaGACACTTACACTGAAAATT +
Preference number: 4 (lower is better)
Translates to: SPIYKGFQLHCIALHIDHQDAAY*TLTLKI
Trigger: AATTTTCAGTGTAAGTGTTCAGTATGCCGCATCCTG...ATGATCTATGTGCAGGGCAATGCAATGAAGTTGAAAACCCTTGTAAATAGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR TCA 90 bp GCACATAGATCATCTAAAACAAAAGCAACACTAGTTATCACTACAAGGCTATTGACACAAGATCAATACTaGGGCAGGATGCGGCATACT +
Preference number: 4 (lower is better)
Translates to: AHRSSKTKATLVITTRLLTQDQY*GRMRHT
Trigger: AGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGT...CAATAGCCTTGTAGTGATAACTAGTGTTGCTTTTGTTTTAGATGATCTATGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR GCA 90 bp GCACATAGATCATCTAAAACAAAAGCAACACTAGTTATCACTACAAGGCTATTGACCATTCGTTGCAATTaGACTCATGGAGATGGCCGT +
Preference number: 4 (lower is better)
Translates to: AHRSSKTKATLVITTRLLTIRCN*THGDGR
Trigger: ACGGCCATCTCCATGAGTGCAATTGCAACGAATGGT...CAATAGCCTTGTAGTGATAACTAGTGTTGCTTTTGTTTTAGATGATCTATGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR GCA 90 bp TTTTCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATAGGTTTTCAACTTCATTaGATTGCCCTGCACATAGAT +
Preference number: 4 (lower is better)
Translates to: FSYWHKEHKINTEAGCGIGFQLH*IALHID
Trigger: ATCTATGTGCAGGGCAATGCAATGAAGTTGAAAACC...TATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR CCA 90 bp TCTCCTATTTACAAGGGTTTTCAACTTCATTGCATTGCCCTGCACATAGATCATTCGCTCTCAAACTCTTaGACGTCAAGGAAAATTCAG +
Preference number: 4 (lower is better)
Translates to: SPIYKGFQLHCIALHIDHSLSNS*TSRKIQ
Trigger: CTGAATTTTCCTTGACGTCCAAGAGTTTGAGAGCGA...ATGATCTATGTGCAGGGCAATGCAATGAAGTTGAAAACCCTTGTAAATAGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CCA 90 bp TTTTCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATAGTAGCACAGAAAACTTaGGTTTTTGTTGTGGGATGT +
Preference number: 4 (lower is better)
Translates to: FSYWHKEHKINTEAGCGIVAQKT*VFVVGC
Trigger: ACATCCCACAACAAAAACCCAAGTTTTCTGTGCTAC...TATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR GCA 90 bp TCTCCTATTTACAAGGGTTTTCAACTTCATTGCATTGCCCTGCACATAGATCATTCAACTTCATTGCATTaGCCTGCACATAGATCATCT +
Preference number: 4 (lower is better)
Translates to: SPIYKGFQLHCIALHIDHSTSLH*PAHRSS
Trigger: AGATGATCTATGTGCAGGGCAATGCAATGAAGTTGA...ATGATCTATGTGCAGGGCAATGCAATGAAGTTGAAAACCCTTGTAAATAGGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR GCA 90 bp TCTCCTATTTACAAGGGTTTTCAACTTCATTGCATTGCCCTGCACATAGATCATGGTTTTCAACTTCATTaGATTGCCCTGCACATAGAT +
Preference number: 4 (lower is better)
Translates to: SPIYKGFQLHCIALHIDHGFQLH*IALHID
Trigger: ATCTATGTGCAGGGCAATGCAATGAAGTTGAAAACC...ATGATCTATGTGCAGGGCAATGCAATGAAGTTGAAAACCCTTGTAAATAGGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR CCA 90 bp TCTCCTATTTACAAGGGTTTTCAACTTCATTGCATTGCCCTGCACATAGATCATGTAGCACAGAAAACTTaGGTTTTTGTTGTGGGATGT +
Preference number: 4 (lower is better)
Translates to: SPIYKGFQLHCIALHIDHVAQKT*VFVVGC
Trigger: ACATCCCACAACAAAAACCCAAGTTTTCTGTGCTAC...ATGATCTATGTGCAGGGCAATGCAATGAAGTTGAAAACCCTTGTAAATAGGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR GCA 90 bp AATACTCTTGATTTGGTTTGCAACCTCTCCTATTTACAAGGGTTTTCAACTTCACATCAACGGAAACTTTaGTCTTGCCAACCAGACAAT +
Preference number: 4 (lower is better)
Translates to: NTLDLVCNLSYLQGFSTSHQRKL*SCQPDN
Trigger: ATTGTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATG...TGAAGTTGAAAACCCTTGTAAATAGGAGAGGTTGCAAACCAAATCAAGAGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS GCA 90 bp CCTTTGACGTCTTCCCCCGGGAGGTGGCGGGGGTCTGCGACCGAATaGCGGCGGGACTCTGGGTCAGGGCTTCTGGCGGGCCCTGCGGGG +
Preference number: 5 (lower is better)
Translates to: PLTSSPGRWRGSATE*RRDSGSGLLAGPAG
Trigger: CCCCGCAGGGCCCGCCAGAAGCCCTGACCCAGAGTCCCGCCGGCATTCGGTCGCAGACCCCCGCCACCTCCCGGGGGAAGACGTCAAAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000428198.1
ENST00000454036.6
CDS GCA 90 bp GCTTTGACGTCTTCCCCCGGGAGGTGGCGGGGGTCTGCGACCGAATaGCGGCGGGACTCTGGGTCAGGGCTTCTGGCGGGCCCTGCGGGG +
Preference number: 5 (lower is better)
Translates to: ALTSSPGRWRGSATE*RRDSGSGLLAGPAG
Trigger: CCCCGCAGGGCCCGCCAGAAGCCCTGACCCAGAGTCCCGCCGGCATTCGGTCGCAGACCCCCGCCACCTCCCGGGGGAAGACGTCAAAGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000628272.1
CDS-3UTR CAA 90 bp TCGGCGAGAAGGGGCGGCGGAGACGGCAAGCGCGGCCTTCCCACCCCGCGGGCCAGGCGGAGCCGCGTGTaGGCTGGATTCTTTCTCCGG +
Preference number: 5 (lower is better)
Translates to: SARRGGGDGKRGLPTPRARRSRV*AGFFLR
Trigger: CCGGAGAAAGAATCCAGCCAACACGCGGCTCCGCCT...GGCCCGCGGGGTGGGAAGGCCGCGCTTGCCGTCTCCGCCGCCCCTTCTCGCCGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS GCA 90 bp ACTTTGACGTCTTCCCCCGGGAGGTGGCGGGGGTCTGCGACCGAATaGCGGCGGGACTCTGGGTCAGGGCTTCTGGCGGGCCCTGCGGGG +
Preference number: 5 (lower is better)
Translates to: TLTSSPGRWRGSATE*RRDSGSGLLAGPAG
Trigger: CCCCGCAGGGCCCGCCAGAAGCCCTGACCCAGAGTCCCGCCGGCATTCGGTCGCAGACCCCCGCCACCTCCCGGGGGAAGACGTCAAAGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000626701.1
CDS-3UTR CAA 90 bp GCGGCGGGGCGCCCTCTCCGAATCAGCCCCAACAGGCGTGGCCTCCGGGCTTCATTGCCATCACCCGGGTaGGCTCCCCCATCGCCGTCC +
Preference number: 5 (lower is better)
Translates to: AAGRPLRISPNRRGLRASLPSPG*APPSPS
Trigger: GGACGGCGATGGGGGAGCCAACCCGGGTGATGGCAA...TGAAGCCCGGAGGCCACGCCTGTTGGGGCTGATTCGGAGAGGGCGCCCCGCCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp TCGGCGAGAAGGGGCGGCGGAGACGGCAAGCGCGGCCTTCCCACCCCGCGGGCCCAGGTCGGCTCTCCATaGGCCTTGCCATGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: SARRGGGDGKRGLPTPRAQVGSP*ALPWPK
Trigger: CTTTGGCCATGGCAAGGCCAATGGAGAGCCGACCTG...GGCCCGCGGGGTGGGAAGGCCGCGCTTGCCGTCTCCGCCGCCCCTTCTCGCCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp TCGGCGAGAAGGGGCGGCGGAGACGGCAAGCGCGGCCTTCCCACCCCGCGGGCCGCCACCGACTTGTCCTaGGTCCAGGTGAGATGCACC +
Preference number: 5 (lower is better)
Translates to: SARRGGGDGKRGLPTPRAATDLS*VQVRCT
Trigger: GGTGCATCTCACCTGGACCAAGGACAAGTCGGTGGC...GGCCCGCGGGGTGGGAAGGCCGCGCTTGCCGTCTCCGCCGCCCCTTCTCGCCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp GGCCCCAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCTTGCCATCACCCGGGTaGGCTCCCCCATCGCCGTCC +
Preference number: 5 (lower is better)
Translates to: GPRARRRRLGPSGETGAALPSPG*APPSPS
Trigger: GGACGGCGATGGGGGAGCCAACCCGGGTGATGGCAA...GGCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTGGGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS GCA 90 bp GTTGCCATCACCTTTGACGTCTTCCCCCGGGAGGTGGCGGGGGTCTaGGACCGAATGCCGGCGGGACTCTGGGTCAGGGCTTCTGGCGGG +
Preference number: 5 (lower is better)
Translates to: VAITFDVFPREVAGV*DRMPAGLWVRASGG
Trigger: CCCGCCAGAAGCCCTGACCCAGAGTCCCGCCGGCATTCGGTCGCAGACCCCCGCCACCTCCCGGGGGAAGACGTCAAAGGTGATGGCAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000454036.6
CDS-3UTR CAA 90 bp CAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCAGATGTTGCCATCACCCGGGTaGGCTCCCCCATCGCCGTCC +
Preference number: 5 (lower is better)
Translates to: QSTEKAAGSLRRDRSCQMLPSPG*APPSPS
Trigger: GGACGGCGATGGGGGAGCCAACCCGGGTGATGGCAA...CATCTGGCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CAA 90 bp GGCACTGAGGAGCTCTGGTCTCTGCGCGGCGGGGCGCCCTCTCCGAATCAGCCCCTGCTTTCCTTGGGGTaGCCATCACCCGGGTTGGCT +
Preference number: 5 (lower is better)
Translates to: GTEELWSLRGGAPSPNQPLLSLG*PSPGLA
Trigger: AGCCAACCCGGGTGATGGCAACCCCAAGGAAAGCAG...GGGCTGATTCGGAGAGGGCGCCCCGCCGCGCAGAGACCAGAGCTCCTCAGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp GCGGCGGGGCGCCCTCTCCGAATCAGCCCCAACAGGCGTGGCCTCCGGGCTTCACTGGCATCTTCTGCCTaGAAGATGGCCATGGCTGGG +
Preference number: 5 (lower is better)
Translates to: AAGRPLRISPNRRGLRASLASSA*KMAMAG
Trigger: CCCAGCCATGGCCATCTTCAAGGCAGAAGATGCCAG...TGAAGCCCGGAGGCCACGCCTGTTGGGGCTGATTCGGAGAGGGCGCCCCGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp CCCTCACTTGTCCCAGGGAGGAAACTCCGGGGAGGGGGCGCCCTCCAGCTCCACTGTGGCCTCCAGTTCTaGGTGTGTGGGGGCCCTTCC +
Preference number: 5 (lower is better)
Translates to: PSLVPGRKLRGGGALQLHCGLQF*VCGGPS
Trigger: GGAAGGGCCCCCACACACCAAGAACTGGAGGCCACA...GTGGAGCTGGAGGGCGCCCCCTCCCCGGAGTTTCCTCCCTGGGACAAGTGAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS GCA 90 bp AGTTGGATTTGCTTTGACGTCTTCCCCCGGGAGGTGGCGGGGGTCTaGGACCGAATGCCGGCGGGACTCTGGGTCAGGGCTTCTGGCGGG +
Preference number: 5 (lower is better)
Translates to: SWICFDVFPREVAGV*DRMPAGLWVRASGG
Trigger: CCCGCCAGAAGCCCTGACCCAGAGTCCCGCCGGCATTCGGTCGCAGACCCCCGCCACCTCCCGGGGGAAGACGTCAAAGCAAATCCAACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000628272.1
CDS GCA 90 bp ATTATTAGCTCCTTTGACGTCTTCCCCCGGGAGGTGGCGGGGGTCTaGGACCGAATGCCGGCGGGACTCTGGGTCAGGGCTTCTGGCGGG +
Preference number: 5 (lower is better)
Translates to: IISSFDVFPREVAGV*DRMPAGLWVRASGG
Trigger: CCCGCCAGAAGCCCTGACCCAGAGTCCCGCCGGCATTCGGTCGCAGACCCCCGCCACCTCCCGGGGGAAGACGTCAAAGGAGCTAATAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000428198.1
CDS-3UTR CAA 90 bp GGCCCCAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCCCTTCCCAAGCCAGCTaGGCACAGACATCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: GPRARRRRLGPSGETGAAPSQAS*AQTSKP
Trigger: TGGCTTTGATGTCTGTGCCAAGCTGGCTTGGGAAGG...GGCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTGGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616933.4
CDS-3UTR CAA 90 bp TGGCAGACCTCCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCCATCCTTCTGGCGCCAGTaGCGGGGCCAGCCAACAAGC +
Preference number: 5 (lower is better)
Translates to: WQTSKPTPATPDAVWVAPSFWRQ*RGQPTS
Trigger: GCTTGTTGGCTGGCCCCGCAACTGGCGCCAGAAGGA...TGGCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGGAGGTCTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp ACGGCTCGGCGAGAAGGGGCGGCGGAGACGGCAAGCGCGGCCTTCCCACCCCGCCGCTCCCGCTCATTCTaGGTTAAATGCATCTGTTTG +
Preference number: 5 (lower is better)
Translates to: TARREGAAETASAAFPPRRSRSF*VKCICL
Trigger: CAAACAGATGCATTTAACCAAGAATGAGCGGGAGCG...GCGGGGTGGGAAGGCCGCGCTTGCCGTCTCCGCCGCCCCTTCTCGCCGAGCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS TCA 90 bp GTTTCAGCACCGTGGACAGCGGTCTCGGGGGCCGCCCTCCACCTCTaGGCAGTGGATGGAGTGGACTTGGATCTGAGTCCCTGGACCCTG +
Preference number: 5 (lower is better)
Translates to: VSAPWTAVSGAALHL*AVDGVDLDLSPWTL
Trigger: CAGGGTCCAGGGACTCAGATCCAAGTCCACTCCATCCACTGCTCAGAGGTGGAGGGCGGCCCCCGAGACCGCTGTCCACGGTGCTGAAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372315.4
ENST00000622711.4
ENST00000625683.2
ENST00000629054.2
CDS CCA 90 bp GGATCAGTTGGATTTGCTGCGGCTCGGCAGCGACCCCTGGCGGTCTaGGGAGGCTTCTCCTCCTCCTTCTCCTCCTCCTCCTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: GSVGFAAARQRPLAV*GGFSSSFSSSSSSS
Trigger: GGAGGAAGAGGAGGAGGAGGAGAAGGAGGAGGAGAAGCCTCCCCAGACCGCCAGGGGTCGCTGCCGAGCCGCAGCAAATCCAACTGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413737.2
ENST00000626695.1
ENST00000626701.1
CDS-3UTR CAA 90 bp ACTGGCAGACCTCCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCAAGCGTGGCCTCCAGTaGGGTGTCCTCAGCAGCGTC +
Preference number: 5 (lower is better)
Translates to: TGRPPNLPQPHLTLSGWRKRGLQ*GVLSSV
Trigger: GACGCTGCTGAGGACACCCAACTGGAGGCCACGCTT...GCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGGAGGTCTGCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp AGGATGTGGTCGTGGCCATGTGAGGCTTGGAGCAGGGCGATGATGACAGAGGGGCTCGCTGGGGCCACTTaGACGTCTTCCCCCGGGAGG +
Preference number: 5 (lower is better)
Translates to: RMWSWPCEAWSRAMMTEGLAGAT*TSSPGR
Trigger: CCTCCCGGGGGAAGACGTCAAAGTGGCCCCAGCGAG...CCCCTCTGTCATCATCGCCCTGCTCCAAGCCTCACATGGCCACGACCACATCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413737.2
CDS CCA 90 bp TCCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCCTCGCTaGGGCCACTACAAGCCGATTCGCCTTGTTCCTTCCAGACCCGAG +
Preference number: 5 (lower is better)
Translates to: SSSSSSSSSSSSSPR*GHYKPIRLVPSRPE
Trigger: CTCGGGTCTGGAAGGAACAAGGCGAATCGGCTTGTAGTGGCCCCAGCGAGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626695.1
ENST00000626701.1
CDS-3UTR CAA 90 bp AGGGCCCTGGGGCTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCCTGCTTTCCTTGGGGTaGCCATCACCCGGGTTGGCT +
Preference number: 5 (lower is better)
Translates to: RALGLEVLYPVPDGAGTSLLSLG*PSPGLA
Trigger: AGCCAACCCGGGTGATGGCAACCCCAAGGAAAGCAG...GCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAGCCCCAGGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CAA 90 bp GAAAGCGTGGCCTCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACAGGCCAACAGCTTCGCCAAACTaGTCCCGCAGGACGACCCCC +
Preference number: 5 (lower is better)
Translates to: ESVASSWVSSAASALHRPTASPN*SRRTTP
Trigger: GGGGGTCGTCCTGCGGGACAAGTTTGGCGAAGCTGT...TGGCCTGTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGAGGCCACGCTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR CAA 90 bp CAAACTGGCACTGAGGAGCTCTGGTCTCTGCGCGGCGGGGCGCCCTCTCCGAATTGCATGCGCCGCACGTaGGACTGGTTCAAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: QTGTEELWSLRGGAPSPNCMRRT*DWFKFS
Trigger: GGAGAACTTGAACCAGTCCAACGTGCGGCGCATGCA...ATTCGGAGAGGGCGCCCCGCCGCGCAGAGACCAGAGCTCCTCAGTGCCAGTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp CAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCAGATGGCCGATGAGAAGAGGTaGCTCGCGTCTCAGCAGGAT +
Preference number: 5 (lower is better)
Translates to: QSTEKAAGSLRRDRSCQMADEKR*LASQQD
Trigger: ATCCTGCTGAGACGCGAGCAACCTCTTCTCATCGGC...CATCTGGCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616202.4
CDS CCA 90 bp GTGGACAGCGGTCTCGGGGGCCGCCCTCCACCTCTGAGCAGTGGATaGAGTGGACTTGGATCTGAGTCCCTGGACCCTGTAGACTTCTGT +
Preference number: 5 (lower is better)
Translates to: VDSGLGGRPPPLSSG*SGLGSESLDPVDFC
Trigger: ACAGAAGTCTACAGGGTCCAGGGACTCAGATCCAAGTCCACTCCATCCACTGCTCAGAGGTGGAGGGCGGCCCCCGAGACCGCTGTCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372315.4
ENST00000622711.4
ENST00000625683.2
ENST00000629054.2
CDS CCA 90 bp GTGTCCATCTCCTCCTATGGAGGGAGGGTGTCAGTGCTAGGAGGCTaGGGGAGCAAGTGGAGTGAGCTGGGTGGCGAAGGGCAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: VSISSYGGRVSVLGG*GSKWSELGGEGQRK
Trigger: CTTCCTCTGCCCTTCGCCACCCAGCTCACTCCACTTGCTCCCCCAGCCTCCTAGCACTGACACCCTCCCTCCATAGGAGGAGATGGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629054.2
CDS-3UTR CAA 90 bp GGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCTCTTTGCCATCACCCGGGTaGGCTCCCCCATCGCCGTCC +
Preference number: 5 (lower is better)
Translates to: GLKGKEVVRSGLLSGASSLPSPG*APPSPS
Trigger: GGACGGCGATGGGGGAGCCAACCCGGGTGATGGCAA...AGAGCTGGCGCCACTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CAA 90 bp CTTGTCCCAGGGAGGAAACTCCGGGGAGGGGGCGCCCTCCAGCTCCACAATTTCTGGTGCCAGTGGGGATaGACTTCTGGGCATCCCTCA +
Preference number: 5 (lower is better)
Translates to: LVPGRKLRGGGALQLHNFWCQWG*TSGHPS
Trigger: TGAGGGATGCCCAGAAGTCAATCCCCACTGGCACCA...GAAATTGTGGAGCTGGAGGGCGCCCCCTCCCCGGAGTTTCCTCCCTGGGACAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp ATCGAAAGCGTGGCCTCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACAGGTGTGGCCTCCAGTTCTaGGTGTGTGGGGGCCCTTCC +
Preference number: 5 (lower is better)
Translates to: IESVASSWVSSAASALHRCGLQF*VCGGPS
Trigger: GGAAGGGCCCCCACACACCAAGAACTGGAGGCCACA...CCTGTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGAGGCCACGCTTTCGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
CDS-3UTR CAA 90 bp CTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCTGTGGTGTTCAGAGGGTCCTTCTGGCGCCAGTaGCGGGGCCAGCCAACAAGC +
Preference number: 5 (lower is better)
Translates to: LWNIQAPRRQDLAVVFRGSFWRQ*RGQPTS
Trigger: GCTTGTTGGCTGGCCCCGCAACTGGCGCCAGAAGGA...CCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp CCGCAGTGGAAGCTCACGTCCGCTGGGAGGCGAATCCAGGAAAAGTTGGACCCTCACTTCCGCCAGACCTaGTGGTGCCGCAGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: PQWKLTSAGRRIQEKLDPHFRQT*WCRSRK
Trigger: CTTCCTGCTGCGGCACCACAAGGTCTGGCGGAAGTG...AGGGTCCAACTTTTCCTGGATTCGCCTCCCAGCGGACGTGAGCTTCCACTGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp TCTTGGTGTGTGGGGGCCCTTCCTCCAGGCGTAAGAGGGCATAGCGAGCCGCACGGAGGCCCAGGCATGTaGAGCAAAACAAGCTTGGCG +
Preference number: 5 (lower is better)
Translates to: SWCVGALPPGVRGHSEPHGGPGM*SKTSLA
Trigger: CGCCAAGCTTGTTTTGCTCAACATGCCTGGGCCTCC...GTGCGGCTCGCTATGCCCTCTTACGCCTGGAGGAAGGGCCCCCACACACCAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR CAA 90 bp GCGGCGGGGCGCCCTCTCCGAATCAGCCCCAACAGGCGTGGCCTCCGGGCTTCAGGGTTTTCAACTTCATaGCATTGCCCTGCACATAGA +
Preference number: 5 (lower is better)
Translates to: AAGRPLRISPNRRGLRASGFSTS*HCPAHR
Trigger: TCTATGTGCAGGGCAATGCAATGAAGTTGAAAACCC...TGAAGCCCGGAGGCCACGCCTGTTGGGGCTGATTCGGAGAGGGCGCCCCGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp GCCTTCAGCTGGGAGGTCAGTGAGAGCAGCTGGGGGTGCACCACATTCTGGTCTTCGCAGTCCGTCAGGTaGTTTAGCATGGTGGCGGCG +
Preference number: 5 (lower is better)
Translates to: AFSWEVSESSWGCTTFWSSQSVR*FSMVAA
Trigger: CGCCGCCACCATGCTAAACAACCTGACGGACTGCGA...AGACCAGAATGTGGTGCACCCCCAGCTGCTCTCACTGACCTCCCAGCTGAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR CAA 90 bp GGGTGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACAAACATGTAGCATTGCCATCACCCGGGTaGGCTCCCCCATCGCCGTCC +
Preference number: 5 (lower is better)
Translates to: GCPQQRLHCTGQIHKHVALPSPG*APPSPS
Trigger: GGACGGCGATGGGGGAGCCAACCCGGGTGATGGCAA...TGCTACATGTTTGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
CDS-3UTR CAA 90 bp AGGCCGGGCTTAGAAAAAGGGCAGCGAAGACCCAGGGGCCAAACTGGCACTGAGAAGGGACTGCTTTCCTaGGGGTTGCCATCACCCGGG +
Preference number: 5 (lower is better)
Translates to: RPGLEKGQRRPRGQTGTEKGLLS*GLPSPG
Trigger: CCCGGGTGATGGCAACCCCAAGGAAAGCAGTCCCTT...CTCAGTGCCAGTTTGGCCCCTGGGTCTTCGCTGCCCTTTTTCTAAGCCCGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp GGCCTCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACAAGGCAGATCGGGAAGTaGGGTGGGTCGAAGGCAGAC +
Preference number: 5 (lower is better)
Translates to: GLQLGVLSSVCTAQARFTRQIGK*GGSKAD
Trigger: GTCTGCCTTCGACCCACCCAACTTCCCGATCTGCCT...TGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR CAA 90 bp CTGGGGCTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGGGCTCTCCATTGGCCTaGCCATGGCCAAAGACCTGC +
Preference number: 5 (lower is better)
Translates to: LGLEVLYPVPDGAGTSMQGSPLA*PWPKTC
Trigger: GCAGGTCTTTGGCCATGGCAAGGCCAATGGAGAGCC...CTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp GGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGTGCCTGACTGTGGCCTCCAGTTCTaGGTGTGTGGGGGCCCTTCC +
Preference number: 5 (lower is better)
Translates to: GGTVPSPRWCWNEHAVPDCGLQF*VCGGPS
Trigger: GGAAGGGCCCCCACACACCAAGAACTGGAGGCCACA...GTCAGGCACTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp ATCGAAAGCGTGGCCTCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACAGGGGCTCTCCATTGGCCTaGCCATGGCCAAAGACCTGG +
Preference number: 5 (lower is better)
Translates to: IESVASSWVSSAASALHRGSPLA*PWPKTW
Trigger: CCAGGTCTTTGGCCATGGCAAGGCCAATGGAGAGCC...CCTGTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGAGGCCACGCTTTCGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539566.3
CDS-3UTR CAA 90 bp CAGGGAGGCCAGTGGAGAGGATGTGGTCGTGGCCATGTGAGGCTTGGAGCAGGGTCAGTTGGATTTGCTTaGACGTCTTCCCCCGGGAGG +
Preference number: 5 (lower is better)
Translates to: QGGQWRGCGRGHVRLGAGSVGFA*TSSPGR
Trigger: CCTCCCGGGGGAAGACGTCAAAGCAAATCCAACTGA...CCCTGCTCCAAGCCTCACATGGCCACGACCACATCCTCTCCACTGGCCTCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628272.1
CDS TCA 90 bp CCCTCCCAAGGGAAGCTACTCCCAACCCACACCACTCTGAGATTCTaGGGGGCAGGGAGGGGGAGTTTGGCAGAGACTCTGAAACAGGGC +
Preference number: 5 (lower is better)
Translates to: PSQGKLLPTHTTLRF*GAGRGSLAETLKQG
Trigger: GCCCTGTTTCAGAGTCTCTGCCAAACTCCCCCTCCCTGCCCCTCAGAATCTCAGAGTGGTGTGGGTTGGGAGTAGCTTCCCTTGGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000372315.4
ENST00000622711.4
ENST00000625683.2
ENST00000629054.2
CDS CCA 90 bp GCAGAGACTCTGAAACAGGGCCAGGGAGGTAGGAGGACGATTCCTTaGGCTCAGAGCAGCAGCACTCACGGGAAGTTGGGTGGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: AETLKQGQGGRRTIP*AQSSSTHGKLGGSK
Trigger: CTTCGACCCACCCAACTTCCCGTGAGTGCTGCTGCTCTGAGCCCAAGGAATCGTCCTCCTACCTCCCTGGCCCTGTTTCAGAGTCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372315.4
ENST00000622711.4
ENST00000625683.2
ENST00000629054.2
CDS CCA 90 bp TGCTGCCTCCCCACTGGCATCTTCTGCCTTGAAGATGGCCATGGCTaGGAAGAGGTAAGCCAGCTACTTGGGAGGCTGAACTGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: CCLPTGIFCLEDGHG*EEVSQLLGRLNWWG
Trigger: CCCCCACCAGTTCAGCCTCCCAAGTAGCTGGCTTACCTCTTCCCAGCCATGGCCATCTTCAAGGCAGAAGATGCCAGTGGGGAGGCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616933.4
ENST00000625683.2
CDS CCA 90 bp GGGCAGGGAGCAGAGGGAGTAAATCCCAGGAGGGAGAAGGAGGGATaGGGAGGCTCAAGGAAGAAGGTAGACTCAAGGGAGGGGTGGAGA +
Preference number: 5 (lower is better)
Translates to: GQGAEGVNPRREKEG*GGSRKKVDSREGWR
Trigger: TCTCCACCCCTCCCTTGAGTCTACCTTCTTCCTTGAGCCTCCCCATCCCTCCTTCTCCCTCCTGGGATTTACTCCCTCTGCTCCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629054.2
CDS-3UTR CAA 90 bp TTACTCAGTGGCGCCAGCTCTGGGAGGTGCGTGAGATGTCAAGCTAGGTGCGCATCGCAGTCCGTCAGGTaGTTTAGCATGGTGGCGGCG +
Preference number: 5 (lower is better)
Translates to: LLSGASSGRCVRCQARCASQSVR*FSMVAA
Trigger: CGCCGCCACCATGCTAAACAACCTGACGGACTGCGA...TGCGCACCTAGCTTGACATCTCACGCACCTCCCAGAGCTGGCGCCACTGAGTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CAA 90 bp GGTGCTGGAACGAGCATGCAGTGCCTGACCCCCTTAGTAATGTGCCCTAGGGGAAAGGGACTGCTTTCCTaGGGGTTGCCATCACCCGGG +
Preference number: 5 (lower is better)
Translates to: GAGTSMQCLTPLVMCPRGKGLLS*GLPSPG
Trigger: CCCGGGTGATGGCAACCCCAAGGAAAGCAGTCCCTT...TCCCCTAGGGCACATTACTAAGGGGGTCAGGCACTGCATGCTCGTTCCAGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CAA 90 bp TTACTCAGTGGCGCCAGCTCTGGGAGGTGCGTGAGATGTCAAGCTAGGTGCGCAAAGGGACTGCTTTCCTaGGGGTTGCCATCACCCGGG +
Preference number: 5 (lower is better)
Translates to: LLSGASSGRCVRCQARCAKGLLS*GLPSPG
Trigger: CCCGGGTGATGGCAACCCCAAGGAAAGCAGTCCCTT...TGCGCACCTAGCTTGACATCTCACGCACCTCCCAGAGCTGGCGCCACTGAGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CAA 90 bp GTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCTCTGGGAGGTGCGTGAGATGTTCATCACAGGTGGCGTaGAGGAAGCGAGAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: VVRSGLLSGASSGRCVRCSSQVA*RKREEQ
Trigger: CTGCTCCTCTCGCTTCCTCAACGCCACCTGTGATGA...ACATCTCACGCACCTCCCAGAGCTGGCGCCACTGAGTAATCCGGACCTCACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616933.4
CDS-3UTR CAA 90 bp ACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGACAGCTTCGCCAAACTaGTCCCGCAGGACGACCCCC +
Preference number: 5 (lower is better)
Translates to: TAHHISSGIFRPPEGRTWTASPN*SRRTTP
Trigger: GGGGGTCGTCCTGCGGGACAAGTTTGGCGAAGCTGT...CCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp AATATCGAAAGCGTGGCCTCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACAAGCGTGGCCTCCAGTaGGGTGTCCTCAGCAGCGTC +
Preference number: 5 (lower is better)
Translates to: NIESVASSWVSSAASALHKRGLQ*GVLSSV
Trigger: GACGCTGCTGAGGACACCCAACTGGAGGCCACGCTT...GTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGAGGCCACGCTTTCGATATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
CDS-3UTR CAA 90 bp GCCCCCAGCGGGAGAGCTCGACTATGGCGAGAAGTCTGTTGCGCTTCTAGTCACCACCACATTCTGGTCTaGGTCCACACGCACCAGCAC +
Preference number: 5 (lower is better)
Translates to: APSGRARLWREVCCASSHHHILV*VHTHQH
Trigger: GTGCTGGTGCGTGTGGACCAAGACCAGAATGTGGTG...GTGACTAGAAGCGCAACAGACTTCTCGCCATAGTCGAGCTCTCCCGCTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp CAAACTGGCACTGAGGAGCTCTGGTCTCTGCGCGGCGGGGCGCCCTCTCCGAATAACATGGAAACGTTCTaGGTGACCAGCAGGGCTAAG +
Preference number: 5 (lower is better)
Translates to: QTGTEELWSLRGGAPSPNNMETF*VTSRAK
Trigger: CTTAGCCCTGCTGGTCACCAAGAACGTTTCCATGTT...ATTCGGAGAGGGCGCCCCGCCGCGCAGAGACCAGAGCTCCTCAGTGCCAGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp GGTGTCGAGGGAACGAGGCCACGACCCCCGCCTGGGCCTAAAGCACTTTCGCTCAACATGGAAACGTTCTaGGTGACCAGCAGGGCTAAG +
Preference number: 5 (lower is better)
Translates to: GVEGTRPRPPPGPKALSLNMETF*VTSRAK
Trigger: CTTAGCCCTGCTGGTCACCAAGAACGTTTCCATGTT...GAGCGAAAGTGCTTTAGGCCCAGGCGGGGGTCGTGGCCTCGTTCCCTCGACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp CCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCCAGCTCCAGCTCACGGAAACTTTGCTCTaGCCAACCAGACAATCTGGG +
Preference number: 5 (lower is better)
Translates to: PNLPQPHLTLSGWRQLQLTETLL*PTRQSG
Trigger: CCCAGATTGTCTGGTTGGCAAGAGCAAAGTTTCCGT...GAGCTGGAGCTGGCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CAA 90 bp AGGATGTGGTCGTGGCCATGTGAGGCTTGGAGCAGGGCGATGATGACAGAGGGGACAAGCCGATTCGCCTaGTTCCTTCCAGACCCGAGG +
Preference number: 5 (lower is better)
Translates to: RMWSWPCEAWSRAMMTEGTSRFA*FLPDPR
Trigger: CCTCGGGTCTGGAAGGAACAAGGCGAATCGGCTTGT...CCCCTCTGTCATCATCGCCCTGCTCCAAGCCTCACATGGCCACGACCACATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626701.1
CDS TCA 90 bp GGGCCGCCCTCCACCTCTGAGCAGTGGATGGAGTGGACTTGGATCTaGGTCCCTGGACCCTGTAGACTTCTGTGTCTTTTCCCATCCTGG +
Preference number: 5 (lower is better)
Translates to: GPPSTSEQWMEWTWI*VPGPCRLLCLFPSW
Trigger: CCAGGATGGGAAAAGACACAGAAGTCTACAGGGTCCAGGGACTCAGATCCAAGTCCACTCCATCCACTGCTCAGAGGTGGAGGGCGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372315.4
ENST00000622711.4
ENST00000625683.2
ENST00000629054.2
CDS CCA 90 bp CCAGAGTGCCCACCACGAGGTTGCCATTCACAGCTTCGCCAAACCTaGAATGATGTGGACAGGAGATGCCAGGTGAGCAGTGCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: PECPPRGCHSQLRQT*NDVDRRCQVSSAAW
Trigger: CCAGGCAGCACTGCTCACCTGGCATCTCCTGTCCACATCATTCCAGGTTTGGCGAAGCTGTGAATGGCAACCTCGTGGTGGGCACTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626144.1
CDS-3UTR CAA 90 bp TACAGCCCCCTTCTGCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCTCGCAGTCCGTCAGGTaGTTTAGCATGGTGGCGGCG +
Preference number: 5 (lower is better)
Translates to: YSPLLHSPSHQLWNIQAPSQSVR*FSMVAA
Trigger: CGCCGCCACCATGCTAAACAACCTGACGGACTGCGA...GGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGCAGAAGGGGGCTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CAA 90 bp CTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCTGTGGTGTTCAGAGGGCTGGCATCTTCTGCCTaGAAGATGGCCATGGCTGGG +
Preference number: 5 (lower is better)
Translates to: LWNIQAPRRQDLAVVFRGLASSA*KMAMAG
Trigger: CCCAGCCATGGCCATCTTCAAGGCAGAAGATGCCAG...CCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616933.4
CDS-3UTR CAA 90 bp GTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCTCTGGGAGGTGCGTGAGATGTCCTTCCCAAGCCAGCTaGGCACAGACATCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: VVRSGLLSGASSGRCVRCPSQAS*AQTSKP
Trigger: TGGCTTTGATGTCTGTGCCAAGCTGGCTTGGGAAGG...ACATCTCACGCACCTCCCAGAGCTGGCGCCACTGAGTAATCCGGACCTCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616933.4
CDS-3UTR CAA 90 bp CTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCTGTGGTGTTCAGAGGGTGGTGCCAGTGGGGATaGACTTCTGGGCATCCCTCA +
Preference number: 5 (lower is better)
Translates to: LWNIQAPRRQDLAVVFRGWCQWG*TSGHPS
Trigger: TGAGGGATGCCCAGAAGTCAATCCCCACTGGCACCA...CCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp TCCCCTATCCTGGCCCCAACTTGCATAAGAGCCGATGAGAAGAGGTTGCTCGCGCAGGTCGGCTCTCCATaGGCCTTGCCATGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: SPILAPTCIRADEKRLLAQVGSP*ALPWPK
Trigger: CTTTGGCCATGGCAAGGCCAATGGAGAGCCGACCTG...CGCGAGCAACCTCTTCTCATCGGCTCTTATGCAAGTTGGGGCCAGGATAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp CAGACAGGCGCTAAGGACAAAGCGCGTGCGACTCCAGCCCTCCCTCAGGCCCAGGTTAAATGCATCTGTTaGAGGATCTGGGAACGCTGC +
Preference number: 5 (lower is better)
Translates to: QTGAKDKARATPALPQAQVKCIC*RIWERC
Trigger: GCAGCGTTCCCAGATCCTCAAACAGATGCATTTAAC...CTGGGCCTGAGGGAGGGCTGGAGTCGCACGCGCTTTGTCCTTAGCGCCTGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp TCCCCTATCCTGGCCCCAACTTGCATAAGAGCCGATGAGAAGAGGTTGCTCGCGGCCACCGACTTGTCCTaGGTCCAGGTGAGATGCACC +
Preference number: 5 (lower is better)
Translates to: SPILAPTCIRADEKRLLAATDLS*VQVRCT
Trigger: GGTGCATCTCACCTGGACCAAGGACAAGTCGGTGGC...CGCGAGCAACCTCTTCTCATCGGCTCTTATGCAAGTTGGGGCCAGGATAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp AGGGCCCTGGGGCTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCTTGAGCAAAACAAGCTaGGCGTCCCGGGATTTCTTC +
Preference number: 5 (lower is better)
Translates to: RALGLEVLYPVPDGAGTSLSKTS*ASRDFF
Trigger: GAAGAAATCCCGGGACGCCAAGCTTGTTTTGCTCAA...GCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAGCCCCAGGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp CTTGTCCCAGGGAGGAAACTCCGGGGAGGGGGCGCCCTCCAGCTCCACAATTTCCGAATCCAGGAAAAGTaGGACCCTTGTCTCACCTCA +
Preference number: 5 (lower is better)
Translates to: LVPGRKLRGGGALQLHNFRIQEK*DPCLTS
Trigger: TGAGGTGAGACAAGGGTCCAACTTTTCCTGGATTCG...GAAATTGTGGAGCTGGAGGGCGCCCCCTCCCCGGAGTTTCCTCCCTGGGACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp AAGCGAGAGGAGCAGAAAAGGCCCCATAGCCGTGTGGTCACCGTCTCATTTCCTGCCGATGAGAAGAGGTaGCTCGCGTCTCTGCAGCCG +
Preference number: 5 (lower is better)
Translates to: KREEQKRPHSRVVTVSFPADEKR*LASLQP
Trigger: CGGCTGCAGAGACGCGAGCAACCTCTTCTCATCGGC...AGGAAATGAGACGGTGACCACACGGCTATGGGGCCTTTTCTGCTCCTCTCGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR CAA 90 bp ACTGGCAGACCTCCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCACGGAAACTTTGCTCTaGCCAACCAGACAATCTGGG +
Preference number: 5 (lower is better)
Translates to: TGRPPNLPQPHLTLSGWRTETLL*PTRQSG
Trigger: CCCAGATTGTCTGGTTGGCAAGAGCAAAGTTTCCGT...GCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGGAGGTCTGCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CAA 90 bp AGGGCCCTGGGGCTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCACGGAAACTTTGCTCTaGCCAACCAGACAATCTGGG +
Preference number: 5 (lower is better)
Translates to: RALGLEVLYPVPDGAGTSTETLL*PTRQSG
Trigger: CCCAGATTGTCTGGTTGGCAAGAGCAAAGTTTCCGT...GCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAGCCCCAGGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CAA 90 bp GGCCCCAGAGCACGGAGAAGGCGGCTGGGTCCCTCAGGCGAGACAGGAGCTGCCCCTCTCCTTTTCATATaGGCACAAAGAACACAAGAT +
Preference number: 5 (lower is better)
Translates to: GPRARRRRLGPSGETGAAPLLFI*AQRTQD
Trigger: ATCTTGTGTTCTTTGTGCCAATATGAAAAGGAGAGG...GGCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTGGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS GCA 90 bp TCTCCACCGAAGGCCAGAAGGATCTTTCCCCTCCCCTATACTCTGTaGCCTGCGTGTAACTTCCATTACAAGACCCTGCACAGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: SPPKARRIFPLPYTL*PACNFHYKTLHRAR
Trigger: GCGGGCCCTGTGCAGGGTCTTGTAATGGAAGTTACACGCAGGGCACAGAGTATAGGGGAGGGGAAAGATCCTTCTGGCCTTCGGTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626695.1
CDS-3UTR CAA 90 bp TCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACAAACATCGCAGTCCGTCAGGTaGTTTAGCATGGTGGCGGCG +
Preference number: 5 (lower is better)
Translates to: SSWVSSAASALHRPDSQTSQSVR*FSMVAA
Trigger: CGCCGCCACCATGCTAAACAACCTGACGGACTGCGA...TGTTTGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
CDS-3UTR CAA 90 bp TCCAGTTGGGTGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACAAACAAAGGGACTGCTTTCCTaGGGGTTGCCATCACCCGGG +
Preference number: 5 (lower is better)
Translates to: SSWVSSAASALHRPDSQTKGLLS*GLPSPG
Trigger: CCCGGGTGATGGCAACCCCAAGGAAAGCAGTCCCTT...TGTTTGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACACCCAACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
CDS-3UTR CAA 90 bp GGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCTCTTCATCACAGGTGGCGTaGAGGAAGCGAGAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: GLKGKEVVRSGLLSGASSSSQVA*RKREEQ
Trigger: CTGCTCCTCTCGCTTCCTCAACGCCACCTGTGATGA...AGAGCTGGCGCCACTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616933.4
CDS-3UTR CAA 90 bp GGTGCTGGAACGAGCATGCAGTGCCTGACCCCCTTAGTAATGTGCCCTAGGGGACTCCAGAGGTTCTCTTaGATGAGGCCACTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: GAGTSMQCLTPLVMCPRGLQRFS*MRPLAA
Trigger: TGCTGCCAGTGGCCTCATCAAAGAGAACCTCTGGAG...TCCCCTAGGGCACATTACTAAGGGGGTCAGGCACTGCATGCTCGTTCCAGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616933.4
CDS-3UTR CAA 90 bp GGGTGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACAAACATGTAGCACAGGTCGGCTCTCCATaGGCCTTGCCATGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: GCPQQRLHCTGQIHKHVAQVGSP*ALPWPK
Trigger: CTTTGGCCATGGCAAGGCCAATGGAGAGCCGACCTG...TGCTACATGTTTGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
CDS-3UTR CAA 90 bp GGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCTCTTGCATGCGCCGCACGTaGGACTGGTTCAAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: GLKGKEVVRSGLLSGASSCMRRT*DWFKFS
Trigger: GGAGAACTTGAACCAGTCCAACGTGCGGCGCATGCA...AGAGCTGGCGCCACTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp AGCAGACAGGCGCTAAGGACAAAGCGCGTGCGACTCCAGCCCTCCCTCAGGCCCTCATCAACGGAAACTTaGCTCTTGCCAACCAGACAA +
Preference number: 5 (lower is better)
Translates to: SRQALRTKRVRLQPSLRPSSTET*LLPTRQ
Trigger: TTGTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATGA...GGGCCTGAGGGAGGGCTGGAGTCGCACGCGCTTTGTCCTTAGCGCCTGTCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS TCA 90 bp GTGCCCACCACGAGGTTGCCATTCACAGCTTCGCCAAACCTGGAATaGTGTGGACAGGAGATGCCAGGTGAGCAGTGCTGCCTGGATTTC +
Preference number: 5 (lower is better)
Translates to: VPTTRLPFTASPNLE*CGQEMPGEQCCLDF
Trigger: GAAATCCAGGCAGCACTGCTCACCTGGCATCTCCTGTCCACATCATTCCAGGTTTGGCGAAGCTGTGAATGGCAACCTCGTGGTGGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626144.1
CDS-3UTR CAA 90 bp GGGAGGCGAATCCAGGAAAAGTTGGACCCTTGTCTCACCTCATCTCGGAAAAGGAGGCAGATCGGGAAGTaGGGTGGGTCGAAGGCAGAC +
Preference number: 5 (lower is better)
Translates to: GRRIQEKLDPCLTSSRKRRQIGK*GGSKAD
Trigger: GTCTGCCTTCGACCCACCCAACTTCCCGATCTGCCT...CCTTTTCCGAGATGAGGTGAGACAAGGGTCCAACTTTTCCTGGATTCGCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp CAGACAGGCGCTAAGGACAAAGCGCGTGCGACTCCAGCCCTCCCTCAGGCCCAGTGGATCTCTGTGACATaGTTTCGGGTGAAGTATTCA +
Preference number: 5 (lower is better)
Translates to: QTGAKDKARATPALPQAQWISVT*FRVKYS
Trigger: TGAATACTTCACCCGAAACAATGTCACAGAGATCCA...CTGGGCCTGAGGGAGGGCTGGAGTCGCACGCGCTTTGTCCTTAGCGCCTGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616933.4
CDS-3UTR CAA 90 bp TCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCTGTGGTGTTCAGAGGGACTCCAGAGGTTCTCTTaGATGAGGCCACTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: SGIFRPPEGRTWLWCSEGLQRFS*MRPLAA
Trigger: TGCTGCCAGTGGCCTCATCAAAGAGAACCTCTGGAG...TCCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616933.4
CDS-3UTR CAA 90 bp ACGCGATGTCTCCTGTACACTATGTATAGGCTCGGCCGCCCGCGCCCCACGGCTTCATCAACGGAAACTTaGCTCTTGCCAACCAGACAA +
Preference number: 5 (lower is better)
Translates to: TRCLLYTMYRLGRPRPTASSTET*LLPTRQ
Trigger: TTGTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATGA...AGCCGTGGGGCGCGGGCGGCCGAGCCTATACATAGTGTACAGGAGACATCGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS GCA 90 bp TTCCAGGGCAGGTCTCCATACCAACTACAGAACCAACTGTGTGCCTaGCACAGGACTAAGTTCTGTAAGGGTGACAGGGGAGGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: FQGRSPYQLQNQLCA*HRTKFCKGDRGGRA
Trigger: GGCTCTGCCTCCCCTGTCACCCTTACAGAACTTAGTCCTGTGGCAGGCACACAGTTGGTTCTGTAGTTGGTATGGAGACCTGCCCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626144.1
CDS GCA 90 bp TGCCATTCACAGCTTCGCCAAACCTGGAATGATGTGGACAGGAGATaGCAGGTGAGCAGTGCTGCCTGGATTTCCAGGGCAGGTCTCCAT +
Preference number: 5 (lower is better)
Translates to: CHSQLRQTWNDVDRR*QVSSAAWISRAGLH
Trigger: ATGGAGACCTGCCCTGGAAATCCAGGCAGCACTGCTCACCTGGCATCTCCTGTCCACATCATTCCAGGTTTGGCGAAGCTGTGAATGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626144.1
CDS-3UTR CAA 90 bp TGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACAAACATGTAGCACATCTGCTTTCCTTGGGGTaGCCATCACCCGGGTTGGCT +
Preference number: 5 (lower is better)
Translates to: CPQQRLHCTGQIHKHVAHLLSLG*PSPGLA
Trigger: AGCCAACCCGGGTGATGGCAACCCCAAGGAAAGCAG...ATGTGCTACATGTTTGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
CDS-3UTR CAA 90 bp CCAGCTCTGCCTTGGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGCCTTCCCAAGCCAGCTaGGCACAGACATCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: PALPWAQRKRGGEVRITQPSQAS*AQTSKP
Trigger: TGGCTTTGATGTCTGTGCCAAGCTGGCTTGGGAAGG...CTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAGGCAGAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616933.4
CDS-3UTR CAA 90 bp AGGGCCCTGGGGCTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCTGGATCTCTGTGACATaGTTTCGGGTGAAGTATTCA +
Preference number: 5 (lower is better)
Translates to: RALGLEVLYPVPDGAGTSWISVT*FRVKYS
Trigger: TGAATACTTCACCCGAAACAATGTCACAGAGATCCA...GCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAGCCCCAGGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616933.4
CDS-3UTR CAA 90 bp TGGGAGGCGAATCCAGGAAAAGTTGGACCCTTGTCTCACCTCATCTCGGAAAAGGGCTCTCCATTGGCCTaGCCATGGCCAAAGACCTGC +
Preference number: 5 (lower is better)
Translates to: WEANPGKVGPLSHLISEKGSPLA*PWPKTC
Trigger: GCAGGTCTTTGGCCATGGCAAGGCCAATGGAGAGCC...CTTTTCCGAGATGAGGTGAGACAAGGGTCCAACTTTTCCTGGATTCGCCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp CCGCCTGGGCCTAAAGCACTTTCGCTCTCAAACTCTTGGACGTCAAGGAAAATTCACTTCCGCCAGACCTaGTGGTGCCGCAGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: PPGPKALSLSNSWTSRKIHFRQT*WCRSRK
Trigger: CTTCCTGCTGCGGCACCACAAGGTCTGGCGGAAGTG...AATTTTCCTTGACGTCCAAGAGTTTGAGAGCGAAAGTGCTTTAGGCCCAGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp GCCCCCAGCGGGAGAGCTCGACTATGGCGAGAAGTCTGTTGCGCTTCTAGTCACCGCTCCCGCTCATTCTaGGTTAAATGCATCTGTTTG +
Preference number: 5 (lower is better)
Translates to: APSGRARLWREVCCASSHRSRSF*VKCICL
Trigger: CAAACAGATGCATTTAACCAAGAATGAGCGGGAGCG...GTGACTAGAAGCGCAACAGACTTCTCGCCATAGTCGAGCTCTCCCGCTGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp CTGGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGTGCCTGGATTCTTTCTCCGGATaGAGCCTCGTGACTCATCTG +
Preference number: 5 (lower is better)
Translates to: LEVLYPVPDGAGTSMQCLDSFSG*SLVTHL
Trigger: CAGATGAGTCACGAGGCTCAATCCGGAGAAAGAATC...CAGGCACTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp CTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCTGTGGTGTTCAGAGGGGATTCTTTCTCCGGATaGAGCCTCGTGACTCATCTG +
Preference number: 5 (lower is better)
Translates to: LWNIQAPRRQDLAVVFRGDSFSG*SLVTHL
Trigger: CAGATGAGTCACGAGGCTCAATCCGGAGAAAGAATC...CCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp CTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCTGTGGTGTTCAGAGGGCCACAATTTCAGTCTTaGGCGAGGAGCCATGGGATA +
Preference number: 5 (lower is better)
Translates to: LWNIQAPRRQDLAVVFRGPQFQS*ARSHGI
Trigger: TATCCCATGGCTCCTCGCCAAAGACTGAAATTGTGG...CCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CAA 90 bp GGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGTGCCTGACCCACAATTTCAGTCTTaGGCGAGGAGCCATGGGATA +
Preference number: 5 (lower is better)
Translates to: GGTVPSPRWCWNEHAVPDPQFQS*ARSHGI
Trigger: TATCCCATGGCTCCTCGCCAAAGACTGAAATTGTGG...GTCAGGCACTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CAA 90 bp GGAGGCCAGTGGAGAGGATGTGGTCGTGGCCATGTGAGGCTTGGAGCAGGGCGAGACAGACTTAAGGCTTaGGCCTTTATTTTGCAAGTG +
Preference number: 5 (lower is better)
Translates to: GGQWRGCGRGHVRLGAGRDRLKA*AFILQV
Trigger: CACTTGCAAAATAAAGGCCAAAGCCTTAAGTCTGTC...TCGCCCTGCTCCAAGCCTCACATGGCCACGACCACATCCTCTCCACTGGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413737.2
CDS-3UTR CAA 90 bp ACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGACCTGGCATGGGATATGGGGATaGACTTCTGGGCATCCCTCA +
Preference number: 5 (lower is better)
Translates to: TAHHISSGIFRPPEGRTWHGIWG*TSGHPS
Trigger: TGAGGGATGCCCAGAAGTCAATCCCCATATCCCATG...CCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616201.4
CDS GCA 90 bp TGTGATACTCTGGATCTAGGGAGTGACATAGGTTGGTGCCAGCTCTaGTGGGAGTCACCACCCATGCCCTGCAAAGAGCTATCACCAGAG +
Preference number: 5 (lower is better)
Translates to: CDTLDLGSDIGWCQL*WESPPMPCKELSPE
Trigger: CTCTGGTGATAGCTCTTTGCAGGGCATGGGTGGTGACTCCCAGCAGAGCTGGCACCAACCTATGTCACTCCCTAGATCCAGAGTATCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628413.1
CDS CCA 90 bp GATACTCTGGATCTAGGGAGTGACATAGGTTGGTGCCAGCTCTGCTaGGAGTCACCACCCATGCCCTGCAAAGAGCTATCACCAGAGATG +
Preference number: 5 (lower is better)
Translates to: DTLDLGSDIGWCQLC*ESPPMPCKELSPEM
Trigger: CATCTCTGGTGATAGCTCTTTGCAGGGCATGGGTGGTGACTCCCAGCAGAGCTGGCACCAACCTATGTCACTCCCTAGATCCAGAGTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628413.1
CDS-3UTR CAA 90 bp TACAGCCCCCTTCTGCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCTTGAGCAAAACAAGCTaGGCGTCCCGGGATTTCTTC +
Preference number: 5 (lower is better)
Translates to: YSPLLHSPSHQLWNIQAPLSKTS*ASRDFF
Trigger: GAAGAAATCCCGGGACGCCAAGCTTGTTTTGCTCAA...GGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGCAGAAGGGGGCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp GGGAGGCGAATCCAGGAAAAGTTGGACCCTTGTCTCACCTCATCTCGGAAAAGGTTCTCCCAACCTTTATaGCAGCGTCTCCTCCGGCGA +
Preference number: 5 (lower is better)
Translates to: GRRIQEKLDPCLTSSRKRFSQPL*QRLLRR
Trigger: TCGCCGGAGGAGACGCTGCAATAAAGGTTGGGAGAA...CCTTTTCCGAGATGAGGTGAGACAAGGGTCCAACTTTTCCTGGATTCGCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp TCTTGGTGTGTGGGGGCCCTTCCTCCAGGCGTAAGAGGGCATAGCGAGCCGCACAAACTTGGGTTTTTGTaGTGGGATGTCTGTTTCATC +
Preference number: 5 (lower is better)
Translates to: SWCVGALPPGVRGHSEPHKLGFL*WDVCFI
Trigger: GATGAAACAGACATCCCACAACAAAAACCCAAGTTT...GTGCGGCTCGCTATGCCCTCTTACGCCTGGAGGAAGGGCCCCCACACACCAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR CAA 90 bp CTGTTTCATCAACGGAAACTTTGCTCTTGCCAACCAGACAATCTGGGCCCAGATCTGCTTTCCTTGGGGTaGCCATCACCCGGGTTGGCT +
Preference number: 5 (lower is better)
Translates to: LFHQRKLCSCQPDNLGPDLLSLG*PSPGLA
Trigger: AGCCAACCCGGGTGATGGCAACCCCAAGGAAAGCAG...ATCTGGGCCCAGATTGTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATGAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CAA 90 bp TGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACAAACATGTAGCACATTTCTCCCAACCTTTATaGCAGCGTCTCCTCCGGCGA +
Preference number: 5 (lower is better)
Translates to: CPQQRLHCTGQIHKHVAHFSQPL*QRLLRR
Trigger: TCGCCGGAGGAGACGCTGCAATAAAGGTTGGGAGAA...ATGTGCTACATGTTTGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616933.4
CDS-3UTR CAA 90 bp GCCCCCAGCGGGAGAGCTCGACTATGGCGAGAAGTCTGTTGCGCTTCTAGTCACTTCGCTCTCAAACTCTaGGACGTCAAGGAAAATTCA +
Preference number: 5 (lower is better)
Translates to: APSGRARLWREVCCASSHFALKL*DVKENS
Trigger: TGAATTTTCCTTGACGTCCAAGAGTTTGAGAGCGAA...GTGACTAGAAGCGCAACAGACTTCTCGCCATAGTCGAGCTCTCCCGCTGGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp CCAGCTCTGCCTTGGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGCGAATCCAGGAAAAGTaGGACCCTTGTCTCACCTCA +
Preference number: 5 (lower is better)
Translates to: PALPWAQRKRGGEVRITQRIQEK*DPCLTS
Trigger: TGAGGTGAGACAAGGGTCCAACTTTTCCTGGATTCG...CTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAGGCAGAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp CCAGCTCTGCCTTGGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGCCACAATTTCAGTCTTaGGCGAGGAGCCATGGGATA +
Preference number: 5 (lower is better)
Translates to: PALPWAQRKRGGEVRITQPQFQS*ARSHGI
Trigger: TATCCCATGGCTCCTCGCCAAAGACTGAAATTGTGG...CTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAGGCAGAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CAA 90 bp AACTGGCAGACCTCCAAACCTACCCCAGCCACACCTGACGCTGTCTGGGTGGCGCCTCTCCTTTTCATATaGGCACAAAGAACACAAGAT +
Preference number: 5 (lower is better)
Translates to: NWQTSKPTPATPDAVWVAPLLFI*AQRTQD
Trigger: ATCTTGTGTTCTTTGTGCCAATATGAAAAGGAGAGG...CGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGGAGGTCTGCCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CAA 90 bp TCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGAAGCGTGGCCTCCAGTaGGGTGTCCTCAGCAGCGTC +
Preference number: 5 (lower is better)
Translates to: SYWHKEHKINTEAGCGILKRGLQ*GVLSSV
Trigger: GACGCTGCTGAGGACACCCAACTGGAGGCCACGCTT...CAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp GGAGGTACTGTACCCAGTCCCAGATGGTGCTGGAACGAGCATGCAGTGCCTGACTTCGCTCTCAAACTCTaGGACGTCAAGGAAAATTCA +
Preference number: 5 (lower is better)
Translates to: GGTVPSPRWCWNEHAVPDFALKL*DVKENS
Trigger: TGAATTTTCCTTGACGTCCAAGAGTTTGAGAGCGAA...GTCAGGCACTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp GAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGAACACTTACACTGAAGCCGATGAGAAGAGGTaGCTCGCGTCTCTGCAGCCG +
Preference number: 5 (lower is better)
Translates to: EHKINTEAGCGILNTYTEADEKR*LASLQP
Trigger: CGGCTGCAGAGACGCGAGCAACCTCTTCTCATCGGC...TTCAGTGTAAGTGTTCAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp AGTCCCCTGATCGAATCTCAGAGGGGACTTGGTGTAACTGGCAGACCTCCAAACCCACAATTTCAGTCTTaGGCGAGGAGCCATGGGATA +
Preference number: 5 (lower is better)
Translates to: SPLIESQRGLGVTGRPPNPQFQS*ARSHGI
Trigger: TATCCCATGGCTCCTCGCCAAAGACTGAAATTGTGG...GTTTGGAGGTCTGCCAGTTACACCAAGTCCCCTCTGAGATTCGATCAGGGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CAA 90 bp GGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCTCTGGGTTTTCAACTTCATaGCATTGCCCTGCACATAGA +
Preference number: 5 (lower is better)
Translates to: GLKGKEVVRSGLLSGASSGFSTS*HCPAHR
Trigger: TCTATGTGCAGGGCAATGCAATGAAGTTGAAAACCC...AGAGCTGGCGCCACTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CAA 90 bp GAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGAACACTTACACTGAAAAGGGACTGCTTTCCTaGGGGTTGCCATCACCCGGG +
Preference number: 5 (lower is better)
Translates to: EHKINTEAGCGILNTYTEKGLLS*GLPSPG
Trigger: CCCGGGTGATGGCAACCCCAAGGAAAGCAGTCCCTT...TTCAGTGTAAGTGTTCAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR CAA 90 bp AGTCCCCTGATCGAATCTCAGAGGGGACTTGGTGTAACTGGCAGACCTCCAAACAACAAGGCCATGTTCTaGCCATCATACTCCTTTCCC +
Preference number: 5 (lower is better)
Translates to: SPLIESQRGLGVTGRPPNNKAMF*PSYSFP
Trigger: GGGAAAGGAGTATGATGGCAAGAACATGGCCTTGTT...GTTTGGAGGTCTGCCAGTTACACCAAGTCCCCTCTGAGATTCGATCAGGGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CAA 90 bp TCTACTGAAGGATGCAGGGGGCTGGTGTCTAACACCTCCAGCTTCCTGATTGAGAACAAGGCCATGTTCTaGCCATCATACTCCTTTCCC +
Preference number: 5 (lower is better)
Translates to: STEGCRGLVSNTSSFLIENKAMF*PSYSFP
Trigger: GGGAAAGGAGTATGATGGCAAGAACATGGCCTTGTT...CTCAATCAGGAAGCTGGAGGTGTTAGACACCAGCCCCCTGCATCCTTCAGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CAA 90 bp TGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGAACACTTCATCACAGGTGGCGTaGAGGAAGCGAGAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: WHKEHKINTEAGCGILNTSSQVA*RKREEQ
Trigger: CTGCTCCTCTCGCTTCCTCAACGCCACCTGTGATGA...AGTGTTCAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616933.4
CDS-3UTR CAA 90 bp TTCTGCACAGCCCATCACATCAGCTCTGGAATATTCAGGCCCCCAGAAGGCAGGTCATCAACGGAAACTTaGCTCTTGCCAACCAGACAA +
Preference number: 5 (lower is better)
Translates to: FCTAHHISSGIFRPPEGRSSTET*LLPTRQ
Trigger: TTGTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATGA...CCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTGATGTGATGGGCTGTGCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CAA 90 bp CCAGCTCTGCCTTGGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGGGGTTTTCAACTTCATaGCATTGCCCTGCACATAGA +
Preference number: 5 (lower is better)
Translates to: PALPWAQRKRGGEVRITQGFSTS*HCPAHR
Trigger: TCTATGTGCAGGGCAATGCAATGAAGTTGAAAACCC...CTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAGGCAGAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CAA 90 bp CTCTCCTTTTCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCTCGCAGTCCGTCAGGTaGTTTAGCATGGTGGCGGCG +
Preference number: 5 (lower is better)
Translates to: LSFSYWHKEHKINTEAGCSQSVR*FSMVAA
Trigger: CGCCGCCACCATGCTAAACAACCTGACGGACTGCGA...GCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGAAAAGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR CAA 90 bp CTCTCCTTTTCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCAAGGGACTGCTTTCCTaGGGGTTGCCATCACCCGGG +
Preference number: 5 (lower is better)
Translates to: LSFSYWHKEHKINTEAGCKGLLS*GLPSPG
Trigger: CCCGGGTGATGGCAACCCCAAGGAAAGCAGTCCCTT...GCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGAAAAGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR CAA 90 bp TGTCCTCAGCAGCGTCTGCACTGCACAGGCCAGATTCACAAACATGTAGCACATAACAAGGCCATGTTCTaGCCATCATACTCCTTTCCC +
Preference number: 5 (lower is better)
Translates to: CPQQRLHCTGQIHKHVAHNKAMF*PSYSFP
Trigger: GGGAAAGGAGTATGATGGCAAGAACATGGCCTTGTT...ATGTGCTACATGTTTGTGAATCTGGCCTGTGCAGTGCAGACGCTGCTGAGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539566.3
ENST00000616933.4
CDS-3UTR CAA 90 bp GAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGAACACTTACACTGAACACCACATTCTGGTCTaGGTCCACACGCACCAGCAC +
Preference number: 5 (lower is better)
Translates to: EHKINTEAGCGILNTYTEHHILV*VHTHQH
Trigger: GTGCTGGTGCGTGTGGACCAAGACCAGAATGTGGTG...TTCAGTGTAAGTGTTCAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp GGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCTCTAAACTTGGGTTTTTGTaGTGGGATGTCTGTTTCATC +
Preference number: 5 (lower is better)
Translates to: GLKGKEVVRSGLLSGASSKLGFL*WDVCFI
Trigger: GATGAAACAGACATCCCACAACAAAAACCCAAGTTT...AGAGCTGGCGCCACTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CAA 90 bp CTTGGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGTGGCGCCAGCAAACTTGGGTTTTTGTaGTGGGATGTCTGTTTCATC +
Preference number: 5 (lower is better)
Translates to: LGLKGKEVVRSGLLSGASKLGFL*WDVCFI
Trigger: GATGAAACAGACATCCCACAACAAAAACCCAAGTTT...GCTGGCGCCACTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CAA 90 bp GCACATAGATCATCTAAAACAAAAGCAACACTAGTTATCACTACAAGGCTATTGTTGCCATCACCCGGGTaGGCTCCCCCATCGCCGTCC +
Preference number: 5 (lower is better)
Translates to: AHRSSKTKATLVITTRLLLPSPG*APPSPS
Trigger: GGACGGCGATGGGGGAGCCAACCCGGGTGATGGCAA...CAATAGCCTTGTAGTGATAACTAGTGTTGCTTTTGTTTTAGATGATCTATGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR CAA 90 bp CCAGCTCTGCCTTGGGCTCAAAGGAAAAGAGGTGGTGAGGTCCGGATTACTCAGCCTCTCCTTTTCATATaGGCACAAAGAACACAAGAT +
Preference number: 5 (lower is better)
Translates to: PALPWAQRKRGGEVRITQPLLFI*AQRTQD
Trigger: ATCTTGTGTTCTTTGTGCCAATATGAAAAGGAGAGG...CTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCAAGGCAGAGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CAA 90 bp AGTCCCCTGATCGAATCTCAGAGGGGACTTGGTGTAACTGGCAGACCTCCAAACAAACTTGGGTTTTTGTaGTGGGATGTCTGTTTCATC +
Preference number: 5 (lower is better)
Translates to: SPLIESQRGLGVTGRPPNKLGFL*WDVCFI
Trigger: GATGAAACAGACATCCCACAACAAAAACCCAAGTTT...GTTTGGAGGTCTGCCAGTTACACCAAGTCCCCTCTGAGATTCGATCAGGGGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CAA 90 bp GCACATAGATCATCTAAAACAAAAGCAACACTAGTTATCACTACAAGGCTATTGAGGCGGAGCCGCGTGTaGGCTGGATTCTTTCTCCGG +
Preference number: 5 (lower is better)
Translates to: AHRSSKTKATLVITTRLLRRSRV*AGFFLR
Trigger: CCGGAGAAAGAATCCAGCCAACACGCGGCTCCGCCT...CAATAGCCTTGTAGTGATAACTAGTGTTGCTTTTGTTTTAGATGATCTATGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp GAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGAACACTTACACTGAAGGAAAAGTTGGACCCTaGTCTCACCTCATCTCGGAA +
Preference number: 5 (lower is better)
Translates to: EHKINTEAGCGILNTYTEGKVGP*SHLISE
Trigger: TTCCGAGATGAGGTGAGACAAGGGTCCAACTTTTCC...TTCAGTGTAAGTGTTCAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp GCACATAGATCATCTAAAACAAAAGCAACACTAGTTATCACTACAAGGCTATTGCTGCTTTCCTTGGGGTaGCCATCACCCGGGTTGGCT +
Preference number: 5 (lower is better)
Translates to: AHRSSKTKATLVITTRLLLLSLG*PSPGLA
Trigger: AGCCAACCCGGGTGATGGCAACCCCAAGGAAAGCAG...CAATAGCCTTGTAGTGATAACTAGTGTTGCTTTTGTTTTAGATGATCTATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR CAA 90 bp AATACTCTTGATTTGGTTTGCAACCTCTCCTATTTACAAGGGTTTTCAACTTCACTGCTTTCCTTGGGGTaGCCATCACCCGGGTTGGCT +
Preference number: 5 (lower is better)
Translates to: NTLDLVCNLSYLQGFSTSLLSLG*PSPGLA
Trigger: AGCCAACCCGGGTGATGGCAACCCCAAGGAAAGCAG...TGAAGTTGAAAACCCTTGTAAATAGGAGAGGTTGCAAACCAAATCAAGAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR CAA 90 bp TCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGAACAAGGCCATGTTCTaGCCATCATACTCCTTTCCC +
Preference number: 5 (lower is better)
Translates to: SYWHKEHKINTEAGCGILNKAMF*PSYSFP
Trigger: GGGAAAGGAGTATGATGGCAAGAACATGGCCTTGTT...CAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR CAA 90 bp GCACATAGATCATCTAAAACAAAAGCAACACTAGTTATCACTACAAGGCTATTGAGGCAGATCGGGAAGTaGGGTGGGTCGAAGGCAGAC +
Preference number: 5 (lower is better)
Translates to: AHRSSKTKATLVITTRLLRQIGK*GGSKAD
Trigger: GTCTGCCTTCGACCCACCCAACTTCCCGATCTGCCT...CAATAGCCTTGTAGTGATAACTAGTGTTGCTTTTGTTTTAGATGATCTATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616933.4
CDS-3UTR CAA 90 bp TCTCCTTTTCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGGAAAAGTTGGACCCTaGTCTCACCTCATCTCGGAA +
Preference number: 5 (lower is better)
Translates to: SPFHIGTKNTRSILRQDAGKVGP*SHLISE
Trigger: TTCCGAGATGAGGTGAGACAAGGGTCCAACTTTTCC...CGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGAAAAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp GAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGAACACTTACACTGAAACGGAAACTTTGCTCTaGCCAACCAGACAATCTGGA +
Preference number: 5 (lower is better)
Translates to: EHKINTEAGCGILNTYTETETLL*PTRQSG
Trigger: TCCAGATTGTCTGGTTGGCAAGAGCAAAGTTTCCGT...TTCAGTGTAAGTGTTCAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626937.2
CDS-3UTR CAA 90 bp AATACTCTTGATTTGGTTTGCAACCTCTCCTATTTACAAGGGTTTTCAACTTCACTGGCATCTTCTGCCTaGAAGATGGCCATGGCTGGG +
Preference number: 5 (lower is better)
Translates to: NTLDLVCNLSYLQGFSTSLASSA*KMAMAG
Trigger: CCCAGCCATGGCCATCTTCAAGGCAGAAGATGCCAG...TGAAGTTGAAAACCCTTGTAAATAGGAGAGGTTGCAAACCAAATCAAGAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616933.4
CDS-3UTR CAA 90 bp AATACTCTTGATTTGGTTTGCAACCTCTCCTATTTACAAGGGTTTTCAACTTCAACGCCATCACGCAAGTaGGAGGAGATCACCACCTGG +
Preference number: 5 (lower is better)
Translates to: NTLDLVCNLSYLQGFSTSTPSRK*EEITTW
Trigger: CCAGGTGGTGATCTCCTCCAACTTGCGTGATGGCGT...TGAAGTTGAAAACCCTTGTAAATAGGAGAGGTTGCAAACCAAATCAAGAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp CTCTCCTTTTCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGTTAAATGCATCTGTTaGAGGATCTGGGAACGCTGC +
Preference number: 5 (lower is better)
Translates to: LSFSYWHKEHKINTEAGCVKCIC*RIWERC
Trigger: GCAGCGTTCCCAGATCCTCAAACAGATGCATTTAAC...GCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGAAAAGGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp GCACATAGATCATCTAAAACAAAAGCAACACTAGTTATCACTACAAGGCTATTGGGAGGCCCAGGCATGTaGAGCAAAACAAGCTTGGCG +
Preference number: 5 (lower is better)
Translates to: AHRSSKTKATLVITTRLLGGPGM*SKTSLA
Trigger: CGCCAAGCTTGTTTTGCTCAACATGCCTGGGCCTCC...CAATAGCCTTGTAGTGATAACTAGTGTTGCTTTTGTTTTAGATGATCTATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243964.7
ENST00000616933.4
CDS-3UTR CAA 90 bp GAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGAACACTTACACTGAAGGGTTTTCAACTTCATaGCATTGCCCTGCACATAGA +
Preference number: 5 (lower is better)
Translates to: EHKINTEAGCGILNTYTEGFSTS*HCPAHR
Trigger: TCTATGTGCAGGGCAATGCAATGAAGTTGAAAACCC...TTCAGTGTAAGTGTTCAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR CAA 90 bp TTTTCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATAAACAAGGCCATGTTCTaGCCATCATACTCCTTTCCC +
Preference number: 5 (lower is better)
Translates to: FSYWHKEHKINTEAGCGINKAMF*PSYSFP
Trigger: GGGAAAGGAGTATGATGGCAAGAACATGGCCTTGTT...TATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR CAA 90 bp GCACATAGATCATCTAAAACAAAAGCAACACTAGTTATCACTACAAGGCTATTGCTCCAGAGGTTCTCTTaGATGAGGCCACTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: AHRSSKTKATLVITTRLLLQRFS*MRPLAA
Trigger: TGCTGCCAGTGGCCTCATCAAAGAGAACCTCTGGAG...CAATAGCCTTGTAGTGATAACTAGTGTTGCTTTTGTTTTAGATGATCTATGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616933.4
CDS-3UTR CAA 90 bp TCTCCTATTTACAAGGGTTTTCAACTTCATTGCATTGCCCTGCACATAGATCATACGGAAACTTTGCTCTaGCCAACCAGACAATCTGGG +
Preference number: 5 (lower is better)
Translates to: SPIYKGFQLHCIALHIDHTETLL*PTRQSG
Trigger: CCCAGATTGTCTGGTTGGCAAGAGCAAAGTTTCCGT...ATGATCTATGTGCAGGGCAATGCAATGAAGTTGAAAACCCTTGTAAATAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
CDS-3UTR CAA 90 bp CTCTCCTTTTCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCTCATCAACGGAAACTTaGCTCTTGCCAACCAGACAA +
Preference number: 5 (lower is better)
Translates to: LSFSYWHKEHKINTEAGCSSTET*LLPTRQ
Trigger: TTGTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATGA...GCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGAAAAGGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS TCA 90 bp CATTCCCACTTAATTCTTCCTAAGTCCACCCTACCAGCAAGAAGTTaGCTCTTACAAGGTAAATTGTTCCCTCCTCCAGAAAAGTTACCT +
Preference number: 5 (lower is better)
Translates to: HSHLILPKSTLPARS*LLQGKLFPPPEKLP
Trigger: AGGTAACTTTTCTGGAGGAGGGAACAATTTACCTTGTAAGAGTCAACTTCTTGCTGGTAGGGTGGACTTAGGAAGAATTAAGTGGGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372315.4
ENST00000622711.4
ENST00000625683.2
ENST00000629054.2
CDS GCA 90 bp TCAGCCAGGATGCACTTTCTGGAACTGTACCAGTTGTTAAAATATTaGTATGATTTGAGACCAAATAGCTACTGCACCACTGATCTGCCT +
Preference number: 5 (lower is better)
Translates to: SARMHFLELYQLLKY*YDLRPNSYCTTDLP
Trigger: AGGCAGATCAGTGGTGCAGTAGCTATTTGGTCTCAAATCATAGCAATATTTTAACAACTGGTACAGTTCCAGAAAGTGCATCCTGGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628413.1
CDS-3UTR CAA 90 bp TTTTCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGGCATAGGGTTTTCAACTTCATaGCATTGCCCTGCACATAGA +
Preference number: 5 (lower is better)
Translates to: FSYWHKEHKINTEAGCGIGFSTS*HCPAHR
Trigger: TCTATGTGCAGGGCAATGCAATGAAGTTGAAAACCC...TATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR CAA 90 bp GAACACAAGATCAATACTGAGGCAGGATGCGGCATACTGAACACTTACACTGAACCTCTCCTTTTCATATaGGCACAAAGAACACAAGAT +
Preference number: 5 (lower is better)
Translates to: EHKINTEAGCGILNTYTEPLLFI*AQRTQD
Trigger: ATCTTGTGTTCTTTGTGCCAATATGAAAAGGAGAGG...TTCAGTGTAAGTGTTCAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR CAA 90 bp TCTCCTTTTCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGAAACTTGGGTTTTTGTaGTGGGATGTCTGTTTCATC +
Preference number: 5 (lower is better)
Translates to: SPFHIGTKNTRSILRQDAKLGFL*WDVCFI
Trigger: GATGAAACAGACATCCCACAACAAAAACCCAAGTTT...CGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGAAAAGGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR CAA 90 bp TCTCCTTTTCATATTGGCACAAAGAACACAAGATCAATACTGAGGCAGGATGCGCCTCTCCTTTTCATATaGGCACAAAGAACACAAGAT +
Preference number: 5 (lower is better)
Translates to: SPFHIGTKNTRSILRQDAPLLFI*AQRTQD
Trigger: ATCTTGTGTTCTTTGTGCCAATATGAAAAGGAGAGG...CGCATCCTGCCTCAGTATTGATCTTGTGTTCTTTGTGCCAATATGAAAAGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS-3UTR CAA 90 bp AATACTCTTGATTTGGTTTGCAACCTCTCCTATTTACAAGGGTTTTCAACTTCATCATCAACGGAAACTTaGCTCTTGCCAACCAGACAA +
Preference number: 5 (lower is better)
Translates to: NTLDLVCNLSYLQGFSTSSSTET*LLPTRQ
Trigger: TTGTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATGA...TGAAGTTGAAAACCCTTGTAAATAGGAGAGGTTGCAAACCAAATCAAGAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000243964.7
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000626937.2
CDS CCA 72 bp CGCCGTCCTCGCAGTCCGTCAGGTTGTTTAGCATGGTaGCGGCGCGGCCCCTGGTCCGGGGATGGCTGCGCC +
Preference number: 6 (lower is better)
Translates to: RRPRSPSGCLAW*RRGPWSGDGCA
Trigger: GGCGCAGCCATCCCCGGACCAGGGGCCGCGCCGCCACCATGCTAAACAACCTGACGGACTGCGAGGACGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000243964.7
ENST00000372315.4
ENST00000539566.3
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000622711.4
ENST00000625683.2
ENST00000626937.2
ENST00000627290.2
ENST00000629054.2
CDS GCA 72 bp TCCTTTGACGTCTTCCCCCGGGAGGTGGCGGGGGTCTaGGACCGAATGCCGGCGGGACTCTGGGTCAGGGCT +
Preference number: 6 (lower is better)
Translates to: SFDVFPREVAGV*DRMPAGLWVRA
Trigger: AGCCCTGACCCAGAGTCCCGCCGGCATTCGGTCGCAGACCCCCGCCACCTCCCGGGGGAAGACGTCAAAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000428198.1
CDS GCA 72 bp ACCTTTGACGTCTTCCCCCGGGAGGTGGCGGGGGTCTaGGACCGAATGCCGGCGGGACTCTGGGTCAGGGCT +
Preference number: 6 (lower is better)
Translates to: TFDVFPREVAGV*DRMPAGLWVRA
Trigger: AGCCCTGACCCAGAGTCCCGCCGGCATTCGGTCGCAGACCCCCGCCACCTCCCGGGGGAAGACGTCAAAGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000454036.6
CDS GCA 72 bp GACTTTGACGTCTTCCCCCGGGAGGTGGCGGGGGTCTaGGACCGAATGCCGGCGGGACTCTGGGTCAGGGCT +
Preference number: 6 (lower is better)
Translates to: DFDVFPREVAGV*DRMPAGLWVRA
Trigger: AGCCCTGACCCAGAGTCCCGCCGGCATTCGGTCGCAGACCCCCGCCACCTCCCGGGGGAAGACGTCAAAGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000626701.1
CDS GCA 72 bp TGCTTTGACGTCTTCCCCCGGGAGGTGGCGGGGGTCTaGGACCGAATGCCGGCGGGACTCTGGGTCAGGGCT +
Preference number: 6 (lower is better)
Translates to: CFDVFPREVAGV*DRMPAGLWVRA
Trigger: AGCCCTGACCCAGAGTCCCGCCGGCATTCGGTCGCAGACCCCCGCCACCTCCCGGGGGAAGACGTCAAAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000628272.1
CDS CCA 72 bp CATCGCCGTCCTCGCAGTCCGTCAGGTTGTTTAGCATaGTGGCGGCGCGGCCCCTGGTCCGGGGATGGCTGC +
Preference number: 6 (lower is better)
Translates to: HRRPRSPSGCLA*WRRGPWSGDGC
Trigger: GCAGCCATCCCCGGACCAGGGGCCGCGCCGCCACCATGCTAAACAACCTGACGGACTGCGAGGACGGCGATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000243964.7
ENST00000372315.4
ENST00000539566.3
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000622711.4
ENST00000625683.2
ENST00000626937.2
ENST00000627290.2
ENST00000629054.2
CDS CCA 72 bp TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCCTCGCTaGGGCCACTTTGACGTCTTCCCCCGGGAGGTGGCG +
Preference number: 6 (lower is better)
Translates to: SSSSSSSSSSPR*GHFDVFPREVA
Trigger: CGCCACCTCCCGGGGGAAGACGTCAAAGTGGCCCCAGCGAGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413737.2
CDS CAA 72 bp TTGGCTCCCCCATCGCCGTCCTCGCAGTCCGTCAGGTaGTTTAGCATGGTGGCGGCGCGGCCCCTGGTCCGG +
Preference number: 6 (lower is better)
Translates to: LAPPSPSSQSVR*FSMVAARPLVR
Trigger: CCGGACCAGGGGCCGCGCCGCCACCATGCTAAACAACCTGACGGACTGCGAGGACGGCGATGGGGGAGCCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000243964.7
ENST00000372315.4
ENST00000539566.3
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000622711.4
ENST00000625683.2
ENST00000626937.2
ENST00000627290.2
ENST00000629054.2
CDS CCA 72 bp GGGTTGCCATCACCTTTGACGTCTTCCCCCGGGAGGTaGCGGGGGTCTGCGACCGAATGCCGGCGGGACTCT +
Preference number: 6 (lower is better)
Translates to: GLPSPLTSSPGR*RGSATECRRDS
Trigger: AGAGTCCCGCCGGCATTCGGTCGCAGACCCCCGCCACCTCCCGGGGGAAGACGTCAAAGGTGATGGCAACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000454036.6
CDS CAA 90 bp CCTCCTCCTCCTCCCCTCGCTGGGGCCACTACAAGCCGATTCGCCTaGTTCCTTCCAGACCCGAGGGCCTCAGAGCCAGGGAGAGGACCC +
Preference number: 6 (lower is better)
Translates to: PPPPPLAGATTSRFA*FLPDPRASEPGRGP
Trigger: GGGTCCTCTCCCTGGCTCTGAGGCCCTCGGGTCTGGAAGGAACAAGGCGAATCGGCTTGTAGTGGCCCCAGCGAGGGGAGGAGGAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626695.1
ENST00000626701.1
CDS TCA 72 bp CCGTGGACAGCGGTCTCGGGGGCCGCCCTCCACCTCTaGGCAGTGGATGGAGTGGACTTGGATCTGAGTCCC +
Preference number: 6 (lower is better)
Translates to: PWTAVSGAALHL*AVDGVDLDLSP
Trigger: GGGACTCAGATCCAAGTCCACTCCATCCACTGCTCAGAGGTGGAGGGCGGCCCCCGAGACCGCTGTCCACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372315.4
ENST00000622711.4
ENST00000625683.2
ENST00000629054.2
CDS CAA 72 bp CCTCCCCTCGCTGGGGCCACTACAAGCCGATTCGCCTaGTTCCTTCCAGACCCGAGGGCCTCAGAGCCAGGG +
Preference number: 6 (lower is better)
Translates to: PPLAGATTSRFA*FLPDPRASEPG
Trigger: CCCTGGCTCTGAGGCCCTCGGGTCTGGAAGGAACAAGGCGAATCGGCTTGTAGTGGCCCCAGCGAGGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626695.1
ENST00000626701.1
CDS CCA 72 bp GGTCTCGGGGGCCGCCCTCCACCTCTGAGCAGTGGATaGAGTGGACTTGGATCTGAGTCCCTGGACCCTGTA +
Preference number: 6 (lower is better)
Translates to: GLGGRPPPLSSG*SGLGSESLDPV
Trigger: TACAGGGTCCAGGGACTCAGATCCAAGTCCACTCCATCCACTGCTCAGAGGTGGAGGGCGGCCCCCGAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372315.4
ENST00000622711.4
ENST00000625683.2
ENST00000629054.2
CDS CCA 72 bp TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCCTCGCTaGGGCCACTACAAGCCGATTCGCCTTGTTCCTTCC +
Preference number: 6 (lower is better)
Translates to: SSSSSSSSSSPR*GHYKPIRLVPS
Trigger: GGAAGGAACAAGGCGAATCGGCTTGTAGTGGCCCCAGCGAGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626695.1
ENST00000626701.1
CDS CCA 72 bp TCAGTTGGATTTGCTTTGACGTCTTCCCCCGGGAGGTaGCGGGGGTCTGCGACCGAATGCCGGCGGGACTCT +
Preference number: 6 (lower is better)
Translates to: SVGFALTSSPGR*RGSATECRRDS
Trigger: AGAGTCCCGCCGGCATTCGGTCGCAGACCCCCGCCACCTCCCGGGGGAAGACGTCAAAGCAAATCCAACTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000628272.1
CDS CCA 72 bp TCCTCCTATGGAGGGAGGGTGTCAGTGCTAGGAGGCTaGGGGAGCAAGTGGAGTGAGCTGGGTGGCGAAGGG +
Preference number: 6 (lower is better)
Translates to: SSYGGRVSVLGG*GSKWSELGGEG
Trigger: CCCTTCGCCACCCAGCTCACTCCACTTGCTCCCCCAGCCTCCTAGCACTGACACCCTCCCTCCATAGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629054.2
CDS CAA 72 bp AGAGGTGAATGGCCAAGACGTGGGGATCAGTTGGATTaGCTGCGGCTCGGCAGCGACCCCTGGCGGTCTGGG +
Preference number: 6 (lower is better)
Translates to: RGEWPRRGDQLD*LRLGSDPWRSG
Trigger: CCCAGACCGCCAGGGGTCGCTGCCGAGCCGCAGCAAATCCAACTGATCCCCACGTCTTGGCCATTCACCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413737.2
ENST00000626701.1
CDS GCA 72 bp GTGCCCCCTGAGGGGAGACTGTGCACGCGCCCAGGATaGTACTTCTCCACCGAAGGCCAGAAGGATCTTTCC +
Preference number: 6 (lower is better)
Translates to: VPPEGRLCTRPG*YFSTEGQKDLS
Trigger: GGAAAGATCCTTCTGGCCTTCGGTGGAGAAGTAGCATCCTGGGCGCGTGCACAGTCTCCCCTCAGGGGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626695.1
CDS TCA 72 bp CCTCCCAAGGGAAGCTACTCCCAACCCACACCACTCTaGGATTCTGAGGGGCAGGGAGGGGGAGTTTGGCAG +
Preference number: 6 (lower is better)
Translates to: PPKGSYSQPTPL*DSEGQGGGVWQ
Trigger: CTGCCAAACTCCCCCTCCCTGCCCCTCAGAATCTCAGAGTGGTGTGGGTTGGGAGTAGCTTCCCTTGGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372315.4
ENST00000622711.4
ENST00000625683.2
ENST00000629054.2
CDS CCA 72 bp GTTTCAGAGGTGAATGGCCAAGACGTGGGGATCAGTTaGATTTGCTGCGGCTCGGCAGCGACCCCTGGCGGT +
Preference number: 6 (lower is better)
Translates to: VSEVNGQDVGIS*ICCGSAATPGG
Trigger: ACCGCCAGGGGTCGCTGCCGAGCCGCAGCAAATCCAACTGATCCCCACGTCTTGGCCATTCACCTCTGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413737.2
ENST00000626701.1
CDS CAA 72 bp AGTTTCAGAGGTGAATGGCCAAGACGTGGGGATCAGTaGGATTTGCTGCGGCTCGGCAGCGACCCCTGGCGG +
Preference number: 6 (lower is better)
Translates to: SFRGEWPRRGDQ*DLLRLGSDPWR
Trigger: CCGCCAGGGGTCGCTGCCGAGCCGCAGCAAATCCAACTGATCCCCACGTCTTGGCCATTCACCTCTGAAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413737.2
ENST00000626701.1
CDS CCA 72 bp CTGAAACAGGGCCAGGGAGGTAGGAGGACGATTCCTTaGGCTCAGAGCAGCAGCACTCACGGGAAGTTGGGT +
Preference number: 6 (lower is better)
Translates to: LKQGQGGRRTIP*AQSSSTHGKLG
Trigger: ACCCAACTTCCCGTGAGTGCTGCTGCTCTGAGCCCAAGGAATCGTCCTCCTACCTCCCTGGCCCTGTTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372315.4
ENST00000622711.4
ENST00000625683.2
ENST00000629054.2
CDS GCA 72 bp GTTCAGCATGGCTGCTGCCTCCCCACTGGCATCTTCTaGCTTGAAGATGGCCATGGCTGGGAAGAGGTAAGC +
Preference number: 6 (lower is better)
Translates to: VQHGCCLPTGIF*LEDGHGWEEVS
Trigger: GCTTACCTCTTCCCAGCCATGGCCATCTTCAAGGCAGAAGATGCCAGTGGGGAGGCAGCAGCCATGCTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000243964.7
ENST00000372315.4
ENST00000454036.6
ENST00000616201.4
ENST00000616933.4
ENST00000622711.4
ENST00000625683.2
ENST00000629054.2
CDS CCA 72 bp AGGCAGTCAGGAGCAGGGCCCAGGTCGGCTCTCCATTaGCCTTGCCATGGCCAAAGACCTGGAAATCATGTA +
Preference number: 6 (lower is better)
Translates to: RQSGAGPRSALH*PCHGQRPGNHV
Trigger: TACATGATTTCCAGGTCTTTGGCCATGGCAAGGCCAATGGAGAGCCGACCTGGGCCCTGCTCCTGACTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539566.3
CDS CAA 72 bp GGGAGGGGGCGCCCTCCAGCTCCACAATTTCAGTCTTaGGCGAGGAGCCATGGGATATGGGGATTGACTTCT +
Preference number: 6 (lower is better)
Translates to: GRGRPPAPQFQS*ARSHGIWGLTS
Trigger: AGAAGTCAATCCCCATATCCCATGGCTCCTCGCCAAAGACTGAAATTGTGGAGCTGGAGGGCGCCCCCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616201.4
CDS GCA 72 bp CTGGATCTAGGGAGTGACATAGGTTGGTGCCAGCTCTaGTGGGAGTCACCACCCATGCCCTGCAAAGAGCTA +
Preference number: 6 (lower is better)
Translates to: LDLGSDIGWCQL*WESPPMPCKEL
Trigger: TAGCTCTTTGCAGGGCATGGGTGGTGACTCCCAGCAGAGCTGGCACCAACCTATGTCACTCCCTAGATCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628413.1
CDS CCA 72 bp GTTTCAGAGGTGAATGGCCAAGACGTGGGGATCAGTTaGATTTGCTTTGACGTCTTCCCCCGGGAGGTGGCG +
Preference number: 6 (lower is better)
Translates to: VSEVNGQDVGIS*ICFDVFPREVA
Trigger: CGCCACCTCCCGGGGGAAGACGTCAAAGCAAATCCAACTGATCCCCACGTCTTGGCCATTCACCTCTGAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628272.1
CDS CAA 72 bp CTGGCCCCAACTTGCATAAGAGCCGATGAGAAGAGGTaGCTCGCGTCTCAGCAGGATTTCGATGGTGCCCAG +
Preference number: 6 (lower is better)
Translates to: LAPTCIRADEKR*LASQQDFDGAQ
Trigger: CTGGGCACCATCGAAATCCTGCTGAGACGCGAGCAACCTCTTCTCATCGGCTCTTATGCAAGTTGGGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616202.4
CDS TCA 72 bp CTCCCCTATCCTGGCCCCAACTTGCATAAGAGCCGATaGGAAGAGGTTGCTCGCGTCTCAGCAGGATTTCGA +
Preference number: 6 (lower is better)
Translates to: LPYPGPNLHKSR*EEVARVSAGFR
Trigger: TCGAAATCCTGCTGAGACGCGAGCAACCTCTTCTCATCGGCTCTTATGCAAGTTGGGGCCAGGATAGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616202.4
CDS TCA 72 bp ACGAGGTTGCCATTCACAGCTTCGCCAAACCTGGAATaGTGTGGACAGGAGATGCCAGGTGAGCAGTGCTGC +
Preference number: 6 (lower is better)
Translates to: TRLPFTASPNLE*CGQEMPGEQCC
Trigger: GCAGCACTGCTCACCTGGCATCTCCTGTCCACATCATTCCAGGTTTGGCGAAGCTGTGAATGGCAACCTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626144.1
CDS GCA 72 bp ATGGCCGTGAGCATCGTAGGTTCTCTTCTGCTGAGCTaGTCCCTGGACCTGTTCCAACTTCTACTCCTGCCA +
Preference number: 6 (lower is better)
Translates to: MAVSIVGSLLLS*SLDLFQLLLLP
Trigger: TGGCAGGAGTAGAAGTTGGAACAGGTCCAGGGAGCAGCTCAGCAGAAGAGAACCTACGATGCTCACGGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637863.1
CDS CCA 72 bp GATCTAGGGAGTGACATAGGTTGGTGCCAGCTCTGCTaGGAGTCACCACCCATGCCCTGCAAAGAGCTATCA +
Preference number: 6 (lower is better)
Translates to: DLGSDIGWCQLC*ESPPMPCKELS
Trigger: TGATAGCTCTTTGCAGGGCATGGGTGGTGACTCCCAGCAGAGCTGGCACCAACCTATGTCACTCCCTAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628413.1
CDS CCA 72 bp CCACCACGAGGTTGCCATTCACAGCTTCGCCAAACCTaGAATGATGTGGACAGGAGATGCCAGGTGAGCAGT +
Preference number: 6 (lower is better)
Translates to: PPRGCHSQLRQT*NDVDRRCQVSS
Trigger: ACTGCTCACCTGGCATCTCCTGTCCACATCATTCCAGGTTTGGCGAAGCTGTGAATGGCAACCTCGTGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626144.1
CDS TCA 72 bp AAGGATGCAGTCATATCCATGCCCCTCAGCAGCCTCTaGTTATTAGCTCCTTTGACGTCTTCCCCCGGGAGG +
Preference number: 6 (lower is better)
Translates to: KDAVISMPLSSL*LLAPLTSSPGR
Trigger: CCTCCCGGGGGAAGACGTCAAAGGAGCTAATAATCAGAGGCTGCTGAGGGGCATGGATATGACTGCATCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428198.1
CDS GCA 72 bp AAGGCCAGAAGGATCTTTCCCCTCCCCTATACTCTGTaGCCTGCGTGTAACTTCCATTACAAGACCCTGCAC +
Preference number: 6 (lower is better)
Translates to: KARRIFPLPYTL*PACNFHYKTLH
Trigger: GTGCAGGGTCTTGTAATGGAAGTTACACGCAGGGCACAGAGTATAGGGGAGGGGAAAGATCCTTCTGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626695.1
CDS CAA 72 bp TTTCCCATCCTGGAGGAGTTGTCCAACACTAGGAGATaGTCCCATTCCAGGAGGTTGTCCCCACCCAGGAAA +
Preference number: 6 (lower is better)
Translates to: FPILEELSNTRR*SHSRRLSPPRK
Trigger: TTTCCTGGGTGGGGACAACCTCCTGGAATGGGACAATCTCCTAGTGTTGGACAACTCCTCCAGGATGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372315.4
ENST00000622711.4
ENST00000625683.2
ENST00000629054.2
CDS CAA 90 bp TCTGTGTCTTTTCCCATCCTGGAGGAGTTGTCCAACACTAGGAGATaGTCCCATTCCAGGAGGTTGTCCCCACCCAGGAAAGGTTTCCCT +
Preference number: 6 (lower is better)
Translates to: SVSFPILEELSNTRR*SHSRRLSPPRKGFP
Trigger: AGGGAAACCTTTCCTGGGTGGGGACAACCTCCTGGAATGGGACAATCTCCTAGTGTTGGACAACTCCTCCAGGATGGGAAAAGACACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372315.4
ENST00000622711.4
ENST00000625683.2
ENST00000629054.2
CDS GCA 72 bp AGGTCTCCATACCAACTACAGAACCAACTGTGTGCCTaGCACAGGACTAAGTTCTGTAAGGGTGACAGGGGA +
Preference number: 6 (lower is better)
Translates to: RSPYQLQNQLCA*HRTKFCKGDRG
Trigger: TCCCCTGTCACCCTTACAGAACTTAGTCCTGTGGCAGGCACACAGTTGGTTCTGTAGTTGGTATGGAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626144.1
CDS CAA 72 bp CTGGTGTCCATCTCCTCCTCAAACAAGGCCATGTTCTaGCCATCATACTCCTTTCCCTTCTCTGTGTCGGTG +
Preference number: 6 (lower is better)
Translates to: LVSISSSNKAMF*PSYSFPFSVSV
Trigger: CACCGACACAGAGAAGGGAAAGGAGTATGATGGCAAGAACATGGCCTTGTTTGAGGAGGAGATGGACACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000243964.7
ENST00000372315.4
ENST00000454036.6
ENST00000539566.3
ENST00000608944.5
ENST00000616201.4
ENST00000616202.4
ENST00000616933.4
ENST00000622711.4
ENST00000625683.2
ENST00000626937.2
CDS CAA 72 bp GTGTCAGTGCTAGGAGGCTCAAACAAGGCCATGTTCTaGCCATCATACTCCTTTCCCTTCTCTGTGTCGGTG +
Preference number: 6 (lower is better)
Translates to: VSVLGGSNKAMF*PSYSFPFSVSV
Trigger: CACCGACACAGAGAAGGGAAAGGAGTATGATGGCAAGAACATGGCCTTGTTTGAGCCTCCTAGCACTGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627290.2
CDS TCA 72 bp GACCGATGCTGCCAGATTCAGGATAAGTTTCAGAGGTaGATGGCCAAGACGTGGGGATCAGTTGGATTTGCT +
Preference number: 6 (lower is better)
Translates to: DRCCQIQDKFQR*MAKTWGSVGFA
Trigger: AGCAAATCCAACTGATCCCCACGTCTTGGCCATTCACCTCTGAAACTTATCCTGAATCTGGCAGCATCGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413737.2
ENST00000626701.1
ENST00000628272.1
CDS GCA 72 bp TTAAAATATTGCTATGATTTGAGACCAAATAGCTACTaGACCACTGATCTGCCTGCCCCACCTCCTCTCCAG +
Preference number: 6 (lower is better)
Translates to: LKYCYDLRPNSY*TTDLPAPPPLQ
Trigger: CTGGAGAGGAGGTGGGGCAGGCAGATCAGTGGTGCAGTAGCTATTTGGTCTCAAATCATAGCAATATTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628413.1
CDS CCA 72 bp TTAAGCTCCCCAAGTGATTCTAATAAGCAGCCAAGGTaGAGAAGCACCGCATTAGTGCAATGCTGTGTTTCA +
Preference number: 6 (lower is better)
Translates to: LSSPSDSNKQPR*RSTALVQCCVS
Trigger: TGAAACACAGCATTGCACTAATGCGGTGCTTCTCCACCTTGGCTGCTTATTAGAATCACTTGGGGAGCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000622711.4
ENST00000625683.2
ENST00000629054.2
CDS GCA 72 bp CCCAGGAAAGGTTTCCCTACCACAGACAGCATTCATTaGTTTGGAACTCATTCCCACTTAATTCTTCCTAAG +
Preference number: 6 (lower is better)
Translates to: PRKGFPTTDSIH*FGTHSHLILPK
Trigger: CTTAGGAAGAATTAAGTGGGAATGAGTTCCAAAGCAATGAATGCTGTCTGTGGTAGGGAAACCTTTCCTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372315.4
ENST00000622711.4
ENST00000625683.2
ENST00000629054.2
CDS CAA 90 bp AACTTGGGTTTTTGTTGTGGGATGTCTGTTTCATCAACGGAAACTTaGCTCTTGCCAACCAGACAATCTGGAAATCATGTAGTAGGAGCC +
Preference number: 6 (lower is better)
Translates to: NLGFCCGMSVSSTET*LLPTRQSGNHVVGA
Trigger: GGCTCCTACTACATGATTTCCAGATTGTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATGAAACAGACATCCCACAACAAAAACCCAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626937.2
CDS CAA 72 bp TGTGGGATGTCTGTTTCATCAACGGAAACTTTGCTCTaGCCAACCAGACAATCTGGAAATCATGTAGTAGGA +
Preference number: 6 (lower is better)
Translates to: CGMSVSSTETLL*PTRQSGNHVVG
Trigger: TCCTACTACATGATTTCCAGATTGTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATGAAACAGACATCCCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626937.2
CDS TCA 72 bp TTAATTCTTCCTAAGTCCACCCTACCAGCAAGAAGTTaGCTCTTACAAGGTAAATTGTTCCCTCCTCCAGAA +
Preference number: 6 (lower is better)
Translates to: LILPKSTLPARS*LLQGKLFPPPE
Trigger: TTCTGGAGGAGGGAACAATTTACCTTGTAAGAGTCAACTTCTTGCTGGTAGGGTGGACTTAGGAAGAATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372315.4
ENST00000622711.4
ENST00000625683.2
ENST00000629054.2
CDS CAA 72 bp CTGGAACTGTACCAGTTGTTAAAATATTGCTATGATTaGAGACCAAATAGCTACTGCACCACTGATCTGCCT +
Preference number: 6 (lower is better)
Translates to: LELYQLLKYCYD*RPNSYCTTDLP
Trigger: AGGCAGATCAGTGGTGCAGTAGCTATTTGGTCTCAAATCATAGCAATATTTTAACAACTGGTACAGTTCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628413.1
CDS CAA 72 bp TTTTGTTGTGGGATGTCTGTTTCATCAACGGAAACTTaGCTCTTGCCAACCAGACAATCTGGAAATCATGTA +
Preference number: 6 (lower is better)
Translates to: FCCGMSVSSTET*LLPTRQSGNHV
Trigger: TACATGATTTCCAGATTGTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATGAAACAGACATCCCACAACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626937.2
CDS CAA 72 bp TGTTCAGCCAGGATGCACTTTCTGGAACTGTACCAGTaGTTAAAATATTGCTATGATTTGAGACCAAATAGC +
Preference number: 6 (lower is better)
Translates to: CSARMHFLELYQ*LKYCYDLRPNS
Trigger: GCTATTTGGTCTCAAATCATAGCAATATTTTAACAACTGGTACAGTTCCAGAAAGTGCATCCTGGCTGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628413.1