RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC12A3 (Homo sapiens)

Ensembl gene IDs: ENSG00000070915

Ensembl transcript IDs: ENST00000262502.5, ENST00000438926.6, ENST00000563236.6, ENST00000563352.1, ENST00000566786.5, ENST00000569002.1

Found 809 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTAGCAAGCCCTGAGGCGGTCAGACAGTGGGGCTTCAGAGCAGCCTaGGAGCCCCAAGCCTTCTGGGCTTTGCAGTGGGATGACCTGAGA +
Preference number: 1 (lower is better)
Translates to: VASPEAVRQWGFRAA*EPQAFWALQWDDLR
Trigger: TCTCAGGTCATCCCACTGCAAAGCCCAGAAGGCTTGGGGCTCCCAGGCTGCTCTGAAGCCCCACTGTCTGACCGCCTCAGGGCTTGCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR GCA 90 bp CTCCTTTCACCTGGTCTTGGGCTAGGCTTGGCTTGGACCTGCTCCTaGCTATCTGTTCCTTGCCAACCTTGCCATCTCTACACCCCTCTC +
Preference number: 1 (lower is better)
Translates to: LLSPGLGLGLAWTCS*LSVPCQPCHLYTPL
Trigger: GAGAGGGGTGTAGAGATGGCAAGGTTGGCAAGGAACAGATAGGCAGGAGCAGGTCCAAGCCAAGCCTAGCCCAAGACCAGGTGAAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR GCA 90 bp TACCCTCACTTGGCCTCACCCACTGGCATTCGATGGCAGTGCTCTTaGACCCTAGCTTTGGGGGCTCAAACACTGGGGATGTTCAACGTG +
Preference number: 1 (lower is better)
Translates to: YPHLASPTGIRWQCS*TLALGAQTLGMFNV
Trigger: CACGTTGAACATCCCCAGTGTTTGAGCCCCCAAAGCTAGGGTGCAAGAGCACTGCCATCGAATGCCAGTGGGTGAGGCCAAGTGAGGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR GCA 90 bp TGCAAATACCCTCACTTGGCCTCACCCACTGGCATTCGATGGCAGTaGTCTTGCACCCTAGCTTTGGGGGCTCAAACACTGGGGATGTTC +
Preference number: 1 (lower is better)
Translates to: CKYPHLASPTGIRWQ*SCTLALGAQTLGMF
Trigger: GAACATCCCCAGTGTTTGAGCCCCCAAAGCTAGGGTGCAAGAGCACTGCCATCGAATGCCAGTGGGTGAGGCCAAGTGAGGGTATTTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR CCA 90 bp GCCAGACTCCCTGTGTGTGGACAAATGCAAGGCACAACAGAAAGGTaGCCATGCCTTTCAAATGTGTGGGTCCCCACCCATGAGTGGATC +
Preference number: 1 (lower is better)
Translates to: ARLPVCGQMQGTTER*PCLSNVWVPTHEWI
Trigger: GATCCACTCATGGGTGGGGACCCACACATTTGAAAGGCATGGCCACCTTTCTGTTGTGCCTTGCATTTGTCCACACACAGGGAGTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR CCA 90 bp TGGTTATGTCTAGAGCTGCAAATACCCTCACTTGGCCTCACCCACTaGCATTCGATGGCAGTGCTCTTGCACCCTAGCTTTGGGGGCTCA +
Preference number: 1 (lower is better)
Translates to: WLCLELQIPSLGLTH*HSMAVLLHPSFGGS
Trigger: TGAGCCCCCAAAGCTAGGGTGCAAGAGCACTGCCATCGAATGCCAGTGGGTGAGGCCAAGTGAGGGTATTTGCAGCTCTAGACATAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR GCA 90 bp CTCCCTGTGTGTGGACAAATGCAAGGCACAACAGAAAGGTGGCCATaGCTTTCAAATGTGTGGGTCCCCACCCATGAGTGGATCCCAAAG +
Preference number: 1 (lower is better)
Translates to: LPVCGQMQGTTERWP*LSNVWVPTHEWIPK
Trigger: CTTTGGGATCCACTCATGGGTGGGGACCCACACATTTGAAAGGCATGGCCACCTTTCTGTTGTGCCTTGCATTTGTCCACACACAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR GCA 90 bp GAGGCTGATGAAACCCAAAGATGTCTGTTCCTTCAGCCACCCCAGTaGCATCGGAAGAAGGCACAGGCAGTCGTACCACCAAACAACTCA +
Preference number: 1 (lower is better)
Translates to: EADETQRCLFLQPPQ*HRKKAQAVVPPNNS
Trigger: TGAGTTGTTTGGTGGTACGACTGCCTGTGCCTTCTTCCGATGGCACTGGGGTGGCTGAAGGAACAGACATCTTTGGGTTTCATCAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR CCA 90 bp AGGCACAGGCAGTCGTACCACCAAACAACTCACCTTTACGCTTCTTaGTTATGTCTAGAGCTGCAAATACCCTCACTTGGCCTCACCCAC +
Preference number: 1 (lower is better)
Translates to: RHRQSYHQTTHLYAS*LCLELQIPSLGLTH
Trigger: GTGGGTGAGGCCAAGTGAGGGTATTTGCAGCTCTAGACATAACCAAGAAGCGTAAAGGTGAGTTGTTTGGTGGTACGACTGCCTGTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR CCA 90 bp AAGACCCAGGGAATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTaGAAATCTACCATCTTTTTCGGTGAGATCATCAGATGCTGCCAC +
Preference number: 1 (lower is better)
Translates to: KTQGMCPMEVESSQI*KSTIFFGEIIRCCH
Trigger: GTGGCAGCATCTGATGATCTCACCGAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACATTCCCTGGGTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
3UTR TCA 90 bp ACATCTTCATTCCTGACATCCTTGTCGTCTGTTCTTAACCATGCCTaGAATCTTACCCTTGCCACTAGACTCCTTCAACCTTGCCCCTTC +
Preference number: 1 (lower is better)
Translates to: TSSFLTSLSSVLNHA*NLTLATRLLQPCPF
Trigger: GAAGGGGCAAGGTTGAAGGAGTCTAGTGGCAAGGGTAAGATTTCAGGCATGGTTAAGAACAGACGACAAGGATGTCAGGAATGAAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR CCA 90 bp GAAAGGTGGCCATGCCTTTCAAATGTGTGGGTCCCCACCCATGAGTaGATCCCAAAGTCATTTTATTGGATTGCAACCAACAGTGAAAAA +
Preference number: 1 (lower is better)
Translates to: ERWPCLSNVWVPTHE*IPKSFYWIATNSEK
Trigger: TTTTTCACTGTTGGTTGCAATCCAATAAAATGACTTTGGGATCCACTCATGGGTGGGGACCCACACATTTGAAAGGCATGGCCACCTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR TCA 90 bp TTCGGTGAGATCATCAGATGCTGCCACTTAAAGTGCAACAGAACATaGGTCTCATCCCTGTGGACTAGAGGCAATCAAGTTCCAACTTAT +
Preference number: 1 (lower is better)
Translates to: FGEIIRCCHLKCNRT*VSSLWTRGNQVPTY
Trigger: ATAAGTTGGAACTTGATTGCCTCTAGTCCACAGGGATGAGACTCATGTTCTGTTGCACTTTAAGTGGCAGCATCTGATGATCTCACCGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
3UTR TCA 90 bp GGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGGTaGGATCATCAGATGCTGCCACTTAAAGTGCAACAGAACATGAGT +
Preference number: 1 (lower is better)
Translates to: GSGVQPDLEIYHLFR*DHQMLPLKVQQNMS
Trigger: ACTCATGTTCTGTTGCACTTTAAGTGGCAGCATCTGATGATCTCACCGAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
3UTR GCA 90 bp ATTGTTTTCTACGTGGCTCTAGAAAGGCCAGCATTCCCTGATGGATaGTTCCCCTTATTTCGAGTTAAGAATTATCCCAGAATCCAGCTC +
Preference number: 1 (lower is better)
Translates to: IVFYVALERPAFPDG*FPLFRVKNYPRIQL
Trigger: GAGCTGGATTCTGGGATAATTCTTAACTCGAAATAAGGGGAAGCATCCATCAGGGAATGCTGGCCTTTCTAGAGCCACGTAGAAAACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR GCA 90 bp GGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCATTAACAGCCCCTCCCTaGCAGCCCCCTCTGCCGCCT +
Preference number: 2 (lower is better)
Translates to: GARELFLVSLAVPQSLVALTAPP*QPPLPP
Trigger: AGGCGGCAGAGGGGGCTGGCAGGGAGGGGCTGTTAA...TGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR CAA 90 bp CATCCTCCAGGTCCCTCAGGAGCACGAGAGCTGTTCCTAGTCAGCTaGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAGA +
Preference number: 2 (lower is better)
Translates to: HPPGPSGARELFLVS*AVPQSLVASPEAVR
Trigger: TCTGACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCCTGAGGGACCTGGAGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR GCA 90 bp TTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCGCCCCCTCTGCCGCCTaGTCTTTCCATCTCTTGCAG +
Preference number: 2 (lower is better)
Translates to: FLVSLAVPQSLVASPEAVAPSAA*SFHLLQ
Trigger: CTGCAAGAGATGGAAAGAGCAGGCGGCAGAGGGGGC...GACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CCA 90 bp GTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAGACAGGAGCCCCAAGCCTTCTaGGCTTTGCAGTGGGATGAC +
Preference number: 2 (lower is better)
Translates to: VSLAVPQSLVASPEAVRQEPQAF*ALQWDD
Trigger: GTCATCCCACTGCAAAGCCCAGAAGGCTTGGGGCTC...CTGTCTGACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR TCA 90 bp CCCTCAGGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTGGGTCCCCACCCATaGGTGGATCCCAAAGTCATT +
Preference number: 2 (lower is better)
Translates to: PSGARELFLVSLAVPQSLVGPHP*VDPKVI
Trigger: AATGACTTTGGGATCCACTCATGGGTGGGGACCCAC...GAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCCTGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR TCA 90 bp TTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCCCTGAAGGCCTTCCGTaGGCCAGGTATAGGTCCTTT +
Preference number: 2 (lower is better)
Translates to: FLVSLAVPQSLVASPEAVPEGLP*ARYRSF
Trigger: AAAGGACCTATACCTGGCTCACGGAAGGCCTTCAGG...GACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CCA 90 bp TTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCCCCACTGGCATTCGATaGCAGTGCTCTTGCACCCTA +
Preference number: 2 (lower is better)
Translates to: FLVSLAVPQSLVASPEAVPTGIR*QCSCTL
Trigger: TAGGGTGCAAGAGCACTGCCATCGAATGCCAGTGGG...GACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR CAA 90 bp GGTGGCTCCTCCTCCCCTCTCCTTTCACCTGGTCTTGGGCTAGGCTaGGCTTGGACCTGCTCCTGCCTATCTGTTCCTTGCCAACCTTGC +
Preference number: 2 (lower is better)
Translates to: GGSSSPLLSPGLGLG*AWTCSCLSVPCQPC
Trigger: GCAAGGTTGGCAAGGAACAGATAGGCAGGAGCAGGTCCAAGCCAAGCCTAGCCCAAGACCAGGTGAAAGGAGAGGGGAGGAGGAGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR GCA 90 bp TTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCGTTCCTTGCCAACCTTaGCATCTCTACACCCCTCTC +
Preference number: 2 (lower is better)
Translates to: FLVSLAVPQSLVASPEAVVPCQP*HLYTPL
Trigger: GAGAGGGGTGTAGAGATGGCAAGGTTGGCAAGGAAC...GACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR TCA 90 bp CCCTCAGGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCTTCTTCCCGGTGAGATaGGCTGGGAAAATGGCAATG +
Preference number: 2 (lower is better)
Translates to: PSGARELFLVSLAVPQSLFFPVR*AGKMAM
Trigger: CATTGCCATTTTCCCAGCTCATCTCACCGGGAAGAA...GAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCCTGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR GCA 90 bp CCCTCAGGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCCTGAGACAGAAGAAATaGTTGAACCCGGGAGGAGGT +
Preference number: 2 (lower is better)
Translates to: PSGARELFLVSLAVPQSLLRQKK*LNPGGG
Trigger: ACCTCCTCCCGGGTTCAAGCATTTCTTCTGTCTCAG...GAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCCTGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR GCA 90 bp GGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAGCTTGGACCTGCTCCTaGCTATCTGTTCCTTGCCAA +
Preference number: 2 (lower is better)
Translates to: GARELFLVSLAVPQSLVAAWTCS*LSVPCQ
Trigger: TTGGCAAGGAACAGATAGGCAGGAGCAGGTCCAAGC...TGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CCA 90 bp CCCTCAGGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCACACACTCAGAGCTGTaGACAGGGATGTCAAAGCCT +
Preference number: 2 (lower is better)
Translates to: PSGARELFLVSLAVPQSLTHSEL*TGMSKP
Trigger: AGGCTTTGACATCCCTGTCCACAGCTCTGAGTGTGT...GAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCCTGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CCA 90 bp GTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAGACAGCTCCCATTCTCCTATTaGAGGAAGCAGGGCATGATT +
Preference number: 2 (lower is better)
Translates to: VSLAVPQSLVASPEAVRQLPFSY*RKQGMI
Trigger: AATCATGCCCTGCTTCCTCCAATAGGAGAATGGGAG...CTGTCTGACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR GCA 90 bp GTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAGACAGCTGTGTGTGGACAAATaGAAGGCACAACAGAAAGGT +
Preference number: 2 (lower is better)
Translates to: VSLAVPQSLVASPEAVRQLCVDK*KAQQKG
Trigger: ACCTTTCTGTTGTGCCTTGCATTTGTCCACACACAG...CTGTCTGACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CCA 90 bp GTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAGACAGATTCACGCCCAGCATTaGGACTCCAATTTGCATACA +
Preference number: 2 (lower is better)
Translates to: VSLAVPQSLVASPEAVRQIHAQH*DSNLHT
Trigger: TGTATGCAAATTGGAGTCCCAATGCTGGGCGTGAAT...CTGTCTGACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR TCA 90 bp GGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCACCACATCTTCATTCCTaGCATCCTTGTCGTCTGTTC +
Preference number: 2 (lower is better)
Translates to: GARELFLVSLAVPQSLVAPHLHS*HPCRLF
Trigger: GAACAGACGACAAGGATGTCAGGAATGAAGATGTGG...TGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR GCA 90 bp GGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAACAGAAAGGTGGCCATaGCTTTCAAATGTGTGGGTC +
Preference number: 2 (lower is better)
Translates to: GARELFLVSLAVPQSLVATERWP*LSNVWV
Trigger: GACCCACACATTTGAAAGGCATGGCCACCTTTCTGT...TGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CCA 90 bp GGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCATTCTGGGCTTTGCAGTaGGATGACCTGAGAAATGCT +
Preference number: 2 (lower is better)
Translates to: GARELFLVSLAVPQSLVAFWALQ*DDLRNA
Trigger: AGCATTTCTCAGGTCATCCCACTGCAAAGCCCAGAA...TGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR CAA 90 bp ATACCCTCACTTGGCCTCACCCACTGGCATTCGATGGCAGTGCTCTaGCACCCTAGCTTTGGGGGCTCAAACACTGGGGATGTTCAACGT +
Preference number: 2 (lower is better)
Translates to: IPSLGLTHWHSMAVL*HPSFGGSNTGDVQR
Trigger: ACGTTGAACATCCCCAGTGTTTGAGCCCCCAAAGCTAGGGTGCAAGAGCACTGCCATCGAATGCCAGTGGGTGAGGCCAAGTGAGGGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CCA 90 bp TTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAATGCTAACATCCTTTaGGTTGTAACTCCAGAAAGG +
Preference number: 2 (lower is better)
Translates to: FLVSLAVPQSLVASPEAVNANIL*VVTPER
Trigger: CCTTTCTGGAGTTACAACCCAAAGGATGTTAGCATT...GACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CCA 90 bp TTATTTCGAGTTAAGAATTATCCCAGAATCCAGCTCAATGGCTGGGAGGCAGGCGAGGCGGTCAGACAGTaGGGCTTCAGAGCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: LFRVKNYPRIQLNGWEAGEAVRQ*GFRAAW
Trigger: CCAGGCTGCTCTGAAGCCCCACTGTCTGACCGCCTC...GCCTGCCTCCCAGCCATTGAGCTGGATTCTGGGATAATTCTTAACTCGAAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR GCA 90 bp GAGCCTGTAGGTCCTACAGGTGAGGCTCCCATTCTCCTATTGGAGGAAGCAGGGGGTGAGATCATCAGATaGTGCCACTTAAAGTGCAAC +
Preference number: 2 (lower is better)
Translates to: EPVGPTGEAPILLLEEAGGEIIR*CHLKCN
Trigger: GTTGCACTTTAAGTGGCAGCATCTGATGATCTCACC...CCCTGCTTCCTCCAATAGGAGAATGGGAGCCTCACCTGTAGGACCTACAGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CCA 90 bp TTATTTCGAGTTAAGAATTATCCCAGAATCCAGCTCAATGGCTGGGAGGCAGGCAATGACACCCAGCCGTaGCCTTTCCCCAGCTCAGCC +
Preference number: 2 (lower is better)
Translates to: LFRVKNYPRIQLNGWEAGNDTQP*PFPSSA
Trigger: GGCTGAGCTGGGGAAAGGCCACGGCTGGGTGTCATT...GCCTGCCTCCCAGCCATTGAGCTGGATTCTGGGATAATTCTTAACTCGAAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR CAA 90 bp CTTAGAGAGCCTGTAGGTCCTACAGGTGAGGCTCCCATTCTCCTATaGGAGGAAGCAGGGCATGATTTAGGAACTTTCACCCAGGAAGGT +
Preference number: 2 (lower is better)
Translates to: LREPVGPTGEAPILL*EEAGHDLGTFTQEG
Trigger: ACCTTCCTGGGTGAAAGTTCCTAAATCATGCCCTGCTTCCTCCAATAGGAGAATGGGAGCCTCACCTGTAGGACCTACAGGCTCTCTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
3UTR CAA 90 bp AAGGCACAGGCAGTCGTACCACCAAACAACTCACCTTTACGCTTCTaGGTTATGTCTAGAGCTGCAAATACCCTCACTTGGCCTCACCCA +
Preference number: 2 (lower is better)
Translates to: KAQAVVPPNNSPLRF*VMSRAANTLTWPHP
Trigger: TGGGTGAGGCCAAGTGAGGGTATTTGCAGCTCTAGACATAACCAAGAAGCGTAAAGGTGAGTTGTTTGGTGGTACGACTGCCTGTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR GCA 90 bp CTTTCAAATGTGTGGGTCCCCACCCATGAGTGGATCCCAAAGTCATTTTATTGGTCGTTTCCGTGTGTGTaGGCTGCAAGTCTCAGTGTG +
Preference number: 2 (lower is better)
Translates to: LSNVWVPTHEWIPKSFYWSFPCV*AASLSV
Trigger: CACACTGAGACTTGCAGCGCACACACACGGAAACGA...CCAATAAAATGACTTTGGGATCCACTCATGGGTGGGGACCCACACATTTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR GCA 90 bp TTATTTCGAGTTAAGAATTATCCCAGAATCCAGCTCAATGGCTGGGAGGCAGGCGCTTGGACCTGCTCCTaGCTATCTGTTCCTTGCCAA +
Preference number: 2 (lower is better)
Translates to: LFRVKNYPRIQLNGWEAGAWTCS*LSVPCQ
Trigger: TTGGCAAGGAACAGATAGGCAGGAGCAGGTCCAAGC...GCCTGCCTCCCAGCCATTGAGCTGGATTCTGGGATAATTCTTAACTCGAAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CCA 90 bp TCTTTGAGGTTTGAAGAACCAGAAAATTGTTTTCTACGTGGCTCTAGAAAGGCCAATGACACCCAGCCGTaGCCTTTCCCCAGCTCAGCC +
Preference number: 2 (lower is better)
Translates to: SLRFEEPENCFLRGSRKANDTQP*PFPSSA
Trigger: GGCTGAGCTGGGGAAAGGCCACGGCTGGGTGTCATT...GGCCTTTCTAGAGCCACGTAGAAAACAATTTTCTGGTTCTTCAAACCTCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR TCA 90 bp CTTTCAAATGTGTGGGTCCCCACCCATGAGTGGATCCCAAAGTCATTTTATTGGTGTAGGTCCTACAGGTaGGGCTCCCATTCTCCTATT +
Preference number: 2 (lower is better)
Translates to: LSNVWVPTHEWIPKSFYWCRSYR*GSHSPI
Trigger: AATAGGAGAATGGGAGCCTCACCTGTAGGACCTACA...CCAATAAAATGACTTTGGGATCCACTCATGGGTGGGGACCCACACATTTGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR GCA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGACTGAGACAGAAGAAATaGTTGAACCCGGGAGGAGGT +
Preference number: 2 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGLRQKK*LNPGGG
Trigger: ACCTCCTCCCGGGTTCAAGCATTTCTTCTGTCTCAG...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
3UTR CAA 90 bp AAGTCCCTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATaGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTGGG +
Preference number: 2 (lower is better)
Translates to: KSLVQRTSEDIKDPL*KVTGVRSGSRNLPG
Trigger: CCCAGGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAGGGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CCA 90 bp CAAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCACACACTCAGAGCTGTaGACAGGGATGTCAAAGCCT +
Preference number: 2 (lower is better)
Translates to: QRPLIESDGSEKWFKKFATHSEL*TGMSKP
Trigger: AGGCTTTGACATCCCTGTCCACAGCTCTGAGTGTGT...GGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CCA 90 bp ATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCACACACTCAGAGCTGTaGACAGGGATGTCAAAGCCT +
Preference number: 2 (lower is better)
Translates to: MCPMEVESSQIWKSTIFFTHSEL*TGMSKP
Trigger: AGGCTTTGACATCCCTGTCCACAGCTCTGAGTGTGT...GAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CCA 90 bp CAAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTGTGTCCCATGGAAGTaGAGTCCAGCCAGATTTGGA +
Preference number: 2 (lower is better)
Translates to: QRPLIESDGSEKWFKKFACVPWK*SPARFG
Trigger: TCCAAATCTGGCTGGACTCCACTTCCATGGGACACA...GGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CCA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGACTCCCATTCTCCTATTaGAGGAAGCAGGGCATGATT +
Preference number: 2 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGLPFSY*RKQGMI
Trigger: AATCATGCCCTGCTTCCTCCAATAGGAGAATGGGAG...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR TCA 90 bp AAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTTGTAGGTCCTACAGGTaGGGCTCCCATTCTCCTATT +
Preference number: 2 (lower is better)
Translates to: KDPLLKVTGVRSGSRNLPCRSYR*GSHSPI
Trigger: AATAGGAGAATGGGAGCCTCACCTGTAGGACCTACA...AGGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR GCA 90 bp CTTTCAAATGTGTGGGTCCCCACCCATGAGTGGATCCCAAAGTCATTTTATTGGGGTGAGATCATCAGATaGTGCCACTTAAAGTGCAAC +
Preference number: 2 (lower is better)
Translates to: LSNVWVPTHEWIPKSFYWGEIIR*CHLKCN
Trigger: GTTGCACTTTAAGTGGCAGCATCTGATGATCTCACC...CCAATAAAATGACTTTGGGATCCACTCATGGGTGGGGACCCACACATTTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CCA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGAATATATGTATTTGCCTaGCTGTGGAGGCTCAGAGAG +
Preference number: 2 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGIYVFA*LWRLRE
Trigger: CTCTCTGAGCCTCCACAGCCAGGCAAATACATATAT...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CCA 90 bp CGCCCAGCATTGGGACTCCAATTTGCATACAAATCAAAGACTGAACTCTTAATTTGTGTCCCATGGAAGTaGAGTCCAGCCAGATTTGGA +
Preference number: 2 (lower is better)
Translates to: RPALGLQFAYKSKTELLICVPWK*SPARFG
Trigger: TCCAAATCTGGCTGGACTCCACTTCCATGGGACACA...AATTAAGAGTTCAGTCTTTGATTTGTATGCAAATTGGAGTCCCAATGCTGGGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR TCA 90 bp GAAAAGTCCCTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAATACCATCTTTTTCGGTaGGATCATCAGATGCTGCCA +
Preference number: 2 (lower is better)
Translates to: EKSLVQRTSEDIKDPLLKYHLFR*DHQMLP
Trigger: TGGCAGCATCTGATGATCTCACCGAAAAAGATGGTA...TTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAGGGACTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CCA 90 bp GCTATTTCTCTAGCCTATAAACACAAGACCCAGGGAATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTaGAAATCTACCATCTTTTTC +
Preference number: 2 (lower is better)
Translates to: AISLAYKHKTQGMCPMEVESSQI*KSTIFF
Trigger: GAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTC...CACTTCCATGGGACACATTCCCTGGGTCTTGTGTTTATAGGCTAGAGAAATAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CCA 90 bp TTATTTCGAGTTAAGAATTATCCCAGAATCCAGCTCAATGGCTGGGAGGCAGGCGAGTCCAGCCAGATTTaGAAATCTACCATCTTTTTC +
Preference number: 2 (lower is better)
Translates to: LFRVKNYPRIQLNGWEAGESSQI*KSTIFF
Trigger: GAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTC...GCCTGCCTCCCAGCCATTGAGCTGGATTCTGGGATAATTCTTAACTCGAAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CCA 90 bp TCTTTGAGGTTTGAAGAACCAGAAAATTGTTTTCTACGTGGCTCTAGAAAGGCCCTCCCATTCTCCTATTaGAGGAAGCAGGGCATGATT +
Preference number: 2 (lower is better)
Translates to: SLRFEEPENCFLRGSRKALPFSY*RKQGMI
Trigger: AATCATGCCCTGCTTCCTCCAATAGGAGAATGGGAG...GGCCTTTCTAGAGCCACGTAGAAAACAATTTTCTGGTTCTTCAAACCTCAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR TCA 90 bp CCTTTAAAAGGAATAGGATGCTTTAGAGAGTTTTCCTTGCAGCTCCATCTGCTATACCATCTTTTTCGGTaGGATCATCAGATGCTGCCA +
Preference number: 2 (lower is better)
Translates to: PLKGIGCFREFSLQLHLLYHLFR*DHQMLP
Trigger: TGGCAGCATCTGATGATCTCACCGAAAAAGATGGTA...TAGCAGATGGAGCTGCAAGGAAAACTCTCTAAAGCATCCTATTCCTTTTAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR TCA 90 bp TCTTTGAGGTTTGAAGAACCAGAAAATTGTTTTCTACGTGGCTCTAGAAAGGCCTGCAGTGGGATGACCTaGGAAATGCTAACATCCTTT +
Preference number: 2 (lower is better)
Translates to: SLRFEEPENCFLRGSRKACSGMT*EMLTSF
Trigger: AAAGGATGTTAGCATTTCTCAGGTCATCCCACTGCA...GGCCTTTCTAGAGCCACGTAGAAAACAATTTTCTGGTTCTTCAAACCTCAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR GCA 90 bp TCTTTGAGGTTTGAAGAACCAGAAAATTGTTTTCTACGTGGCTCTAGAAAGGCCGGTGAGATCATCAGATaGTGCCACTTAAAGTGCAAC +
Preference number: 2 (lower is better)
Translates to: SLRFEEPENCFLRGSRKAGEIIR*CHLKCN
Trigger: GTTGCACTTTAAGTGGCAGCATCTGATGATCTCACC...GGCCTTTCTAGAGCCACGTAGAAAACAATTTTCTGGTTCTTCAAACCTCAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CCA 90 bp TCTTTGAGGTTTGAAGAACCAGAAAATTGTTTTCTACGTGGCTCTAGAAAGGCCGTCCCCACCCATGAGTaGATCCCAAAGTCATTTTAT +
Preference number: 2 (lower is better)
Translates to: SLRFEEPENCFLRGSRKAVPTHE*IPKSFY
Trigger: ATAAAATGACTTTGGGATCCACTCATGGGTGGGGAC...GGCCTTTCTAGAGCCACGTAGAAAACAATTTTCTGGTTCTTCAAACCTCAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR TCA 72 bp CAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTaGGGCGGTCAGACAGTGGGGCTTCAGAGCAGCCTG +
Preference number: 3 (lower is better)
Translates to: QLGRAPVPRSKP*GGQTVGLQSSL
Trigger: CAGGCTGCTCTGAAGCCCCACTGTCTGACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CAA 90 bp TTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCTGTAACCCCAGCACTTaGGGAGACCGAGGTGGGTGG +
Preference number: 3 (lower is better)
Translates to: FLVSLAVPQSLVASPEAVCNPST*GDRGGW
Trigger: CCACCCACCTCGGTCTCCCAAAGTGCTGGGGTTACA...GACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CAA 90 bp GGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCATCGATGGCAGTGCTCTaGCACCCTAGCTTTGGGGGC +
Preference number: 3 (lower is better)
Translates to: GARELFLVSLAVPQSLVASMAVL*HPSFGG
Trigger: GCCCCCAAAGCTAGGGTGCAAGAGCACTGCCATCGA...TGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CAA 90 bp GGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGTGGTTCAAGAAATTaGCCTGGGCCGGGCGCAGTG +
Preference number: 3 (lower is better)
Translates to: GARELFLVSLAVPQSLVASGSRN*PGPGAV
Trigger: CACTGCGCCCGGCCCAGGCAAATTTCTTGAACCACT...TGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CAA 90 bp TTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCGCTCCCATTCTCCTATaGGAGGAAGCAGGGCATGAT +
Preference number: 3 (lower is better)
Translates to: FLVSLAVPQSLVASPEAVAPILL*EEAGHD
Trigger: ATCATGCCCTGCTTCCTCCAATAGGAGAATGGGAGC...GACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CAA 90 bp GGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGACAGAAGAAATGCTaGAACCCGGGAGGAGGTTGC +
Preference number: 3 (lower is better)
Translates to: GARELFLVSLAVPQSLVARQKKC*NPGGGC
Trigger: GCAACCTCCTCCCGGGTTCAAGCATTTCTTCTGTCT...TGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CAA 90 bp GTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAGACAGCCTGAAATCTTACCCTaGCCACTAGACTCCTTCAAC +
Preference number: 3 (lower is better)
Translates to: VSLAVPQSLVASPEAVRQPEILP*PLDSFN
Trigger: GTTGAAGGAGTCTAGTGGCAAGGGTAAGATTTCAGG...CTGTCTGACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR GCA 72 bp TTGGCCTCACCCACTGGCATTCGATGGCAGTGCTCTTaGACCCTAGCTTTGGGGGCTCAAACACTGGGGATG +
Preference number: 3 (lower is better)
Translates to: LASPTGIRWQCS*TLALGAQTLGM
Trigger: CATCCCCAGTGTTTGAGCCCCCAAAGCTAGGGTGCAAGAGCACTGCCATCGAATGCCAGTGGGTGAGGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR GCA 72 bp CCTCACTTGGCCTCACCCACTGGCATTCGATGGCAGTaGTCTTGCACCCTAGCTTTGGGGGCTCAAACACTG +
Preference number: 3 (lower is better)
Translates to: PHLASPTGIRWQ*SCTLALGAQTL
Trigger: CAGTGTTTGAGCCCCCAAAGCTAGGGTGCAAGAGCACTGCCATCGAATGCCAGTGGGTGAGGCCAAGTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR GCA 72 bp CCTGGTCTTGGGCTAGGCTTGGCTTGGACCTGCTCCTaGCTATCTGTTCCTTGCCAACCTTGCCATCTCTAC +
Preference number: 3 (lower is better)
Translates to: PGLGLGLAWTCS*LSVPCQPCHLY
Trigger: GTAGAGATGGCAAGGTTGGCAAGGAACAGATAGGCAGGAGCAGGTCCAAGCCAAGCCTAGCCCAAGACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR CCA 72 bp CCTCTCCTTTCACCTGGTCTTGGGCTAGGCTTGGCTTaGACCTGCTCCTGCCTATCTGTTCCTTGCCAACCT +
Preference number: 3 (lower is better)
Translates to: PLLSPGLGLGLA*TCSCLSVPCQP
Trigger: AGGTTGGCAAGGAACAGATAGGCAGGAGCAGGTCCAAGCCAAGCCTAGCCCAAGACCAGGTGAAAGGAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CAA 90 bp GTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAGACAGTTTAGAGAGTTTTCCTaGCAGCTCCATCTGCTATTT +
Preference number: 3 (lower is better)
Translates to: VSLAVPQSLVASPEAVRQFREFS*QLHLLF
Trigger: AAATAGCAGATGGAGCTGCAAGGAAAACTCTCTAAA...CTGTCTGACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR GCA 72 bp CTTTCACCTGGTCTTGGGCTAGGCTTGGCTTGGACCTaGTCCTGCCTATCTGTTCCTTGCCAACCTTGCCAT +
Preference number: 3 (lower is better)
Translates to: LSPGLGLGLAWT*SCLSVPCQPCH
Trigger: ATGGCAAGGTTGGCAAGGAACAGATAGGCAGGAGCAGGTCCAAGCCAAGCCTAGCCCAAGACCAGGTGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR GCA 72 bp GAAACCCAAAGATGTCTGTTCCTTCAGCCACCCCAGTaGCATCGGAAGAAGGCACAGGCAGTCGTACCACCA +
Preference number: 3 (lower is better)
Translates to: ETQRCLFLQPPQ*HRKKAQAVVPP
Trigger: TGGTGGTACGACTGCCTGTGCCTTCTTCCGATGGCACTGGGGTGGCTGAAGGAACAGACATCTTTGGGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CAA 90 bp AATGCAAGGCACAACAGAAAGGTGGCCATGCCTTTCAAATGTGTGGGTCCCCACAGTGGTTCAAGAAATTaGCCTGGGCCGGGCGCAGTG +
Preference number: 3 (lower is better)
Translates to: NARHNRKVAMPFKCVGPHSGSRN*PGPGAV
Trigger: CACTGCGCCCGGCCCAGGCAAATTTCTTGAACCACT...GTGGGGACCCACACATTTGAAAGGCATGGCCACCTTTCTGTTGTGCCTTGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR CCA 72 bp CTAGAGCTGCAAATACCCTCACTTGGCCTCACCCACTaGCATTCGATGGCAGTGCTCTTGCACCCTAGCTTT +
Preference number: 3 (lower is better)
Translates to: LELQIPSLGLTH*HSMAVLLHPSF
Trigger: AAAGCTAGGGTGCAAGAGCACTGCCATCGAATGCCAGTGGGTGAGGCCAAGTGAGGGTATTTGCAGCTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR TCA 72 bp ACGTGTTCTGTCAATCTGCTTTTCTTCCCGGTGAGATaGGCTGGGAAAATGGCAATGACACCCAGCCGTGGC +
Preference number: 3 (lower is better)
Translates to: TCSVNLLFFPVR*AGKMAMTPSRG
Trigger: GCCACGGCTGGGTGTCATTGCCATTTTCCCAGCTCATCTCACCGGGAAGAAAAGCAGATTGACAGAACACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR CCA 72 bp CCTGTGTGTGGACAAATGCAAGGCACAACAGAAAGGTaGCCATGCCTTTCAAATGTGTGGGTCCCCACCCAT +
Preference number: 3 (lower is better)
Translates to: PVCGQMQGTTER*PCLSNVWVPTH
Trigger: ATGGGTGGGGACCCACACATTTGAAAGGCATGGCCACCTTTCTGTTGTGCCTTGCATTTGTCCACACACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CAA 90 bp GAGCCTGTAGGTCCTACAGGTGAGGCTCCCATTCTCCTATTGGAGGAAGCAGGGGGAGTCCAGCCAGATTaGGAAATCTACCATCTTTTT +
Preference number: 3 (lower is better)
Translates to: EPVGPTGEAPILLLEEAGGVQPD*EIYHLF
Trigger: AAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCC...CCCTGCTTCCTCCAATAGGAGAATGGGAGCCTCACCTGTAGGACCTACAGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
3UTR CCA 72 bp GGCACAACAGAAAGGTGGCCATGCCTTTCAAATGTGTaGGTCCCCACCCATGAGTGGATCCCAAAGTCATTT +
Preference number: 3 (lower is better)
Translates to: GTTERWPCLSNV*VPTHEWIPKSF
Trigger: AAATGACTTTGGGATCCACTCATGGGTGGGGACCCACACATTTGAAAGGCATGGCCACCTTTCTGTTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CAA 90 bp TTATTTCGAGTTAAGAATTATCCCAGAATCCAGCTCAATGGCTGGGAGGCAGGCAGACAGAAGAAATGCTaGAACCCGGGAGGAGGTTGC +
Preference number: 3 (lower is better)
Translates to: LFRVKNYPRIQLNGWEAGRQKKC*NPGGGC
Trigger: GCAACCTCCTCCCGGGTTCAAGCATTTCTTCTGTCT...GCCTGCCTCCCAGCCATTGAGCTGGATTCTGGGATAATTCTTAACTCGAAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CAA 90 bp TCTTTGAGGTTTGAAGAACCAGAAAATTGTTTTCTACGTGGCTCTAGAAAGGCCTCTTGCACCCTAGCTTaGGGGGCTCAAACACTGGGG +
Preference number: 3 (lower is better)
Translates to: SLRFEEPENCFLRGSRKASCTLA*GAQTLG
Trigger: CCCCAGTGTTTGAGCCCCCAAAGCTAGGGTGCAAGA...GGCCTTTCTAGAGCCACGTAGAAAACAATTTTCTGGTTCTTCAAACCTCAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR CCA 72 bp CCATGCCTTTCAAATGTGTGGGTCCCCACCCATGAGTaGATCCCAAAGTCATTTTATTGGATTGCAACCAAC +
Preference number: 3 (lower is better)
Translates to: PCLSNVWVPTHE*IPKSFYWIATN
Trigger: GTTGGTTGCAATCCAATAAAATGACTTTGGGATCCACTCATGGGTGGGGACCCACACATTTGAAAGGCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR CCA 72 bp CAGTCGTACCACCAAACAACTCACCTTTACGCTTCTTaGTTATGTCTAGAGCTGCAAATACCCTCACTTGGC +
Preference number: 3 (lower is better)
Translates to: QSYHQTTHLYAS*LCLELQIPSLG
Trigger: GCCAAGTGAGGGTATTTGCAGCTCTAGACATAACCAAGAAGCGTAAAGGTGAGTTGTTTGGTGGTACGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CAA 90 bp AAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTGATTCACGCCCAGCATaGGGACTCCAATTTGCATAC +
Preference number: 3 (lower is better)
Translates to: KDPLLKVTGVRSGSRNLPDSRPA*GLQFAY
Trigger: GTATGCAAATTGGAGTCCCAATGCTGGGCGTGAATC...AGGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
3UTR TCA 72 bp TTCCTGACATCCTTGTCGTCTGTTCTTAACCATGCCTaGAATCTTACCCTTGCCACTAGACTCCTTCAACCT +
Preference number: 3 (lower is better)
Translates to: FLTSLSSVLNHA*NLTLATRLLQP
Trigger: AGGTTGAAGGAGTCTAGTGGCAAGGGTAAGATTTCAGGCATGGTTAAGAACAGACGACAAGGATGTCAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR GCA 72 bp TACGTGGCTCTAGAAAGGCCAGCATTCCCTGATGGATaGTTCCCCTTATTTCGAGTTAAGAATTATCCCAGA +
Preference number: 3 (lower is better)
Translates to: YVALERPAFPDG*FPLFRVKNYPR
Trigger: TCTGGGATAATTCTTAACTCGAAATAAGGGGAAGCATCCATCAGGGAATGCTGGCCTTTCTAGAGCCACGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR CCA 72 bp TTGCAGTGGGATGACCTGAGAAATGCTAACATCCTTTaGGTTGTAACTCCAGAAAGGAGACTTCAGATCTCC +
Preference number: 3 (lower is better)
Translates to: LQWDDLRNANIL*VVTPERRLQIS
Trigger: GGAGATCTGAAGTCTCCTTTCTGGAGTTACAACCCAAAGGATGTTAGCATTTCTCAGGTCATCCCACTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CAA 90 bp CTTTCAAATGTGTGGGTCCCCACCCATGAGTGGATCCCAAAGTCATTTTATTGGGGAGTCCAGCCAGATTaGGAAATCTACCATCTTTTT +
Preference number: 3 (lower is better)
Translates to: LSNVWVPTHEWIPKSFYWGVQPD*EIYHLF
Trigger: AAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCC...CCAATAAAATGACTTTGGGATCCACTCATGGGTGGGGACCCACACATTTGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
3UTR TCA 72 bp ATCATCAGATGCTGCCACTTAAAGTGCAACAGAACATaGGTCTCATCCCTGTGGACTAGAGGCAATCAAGTT +
Preference number: 3 (lower is better)
Translates to: IIRCCHLKCNRT*VSSLWTRGNQV
Trigger: AACTTGATTGCCTCTAGTCCACAGGGATGAGACTCATGTTCTGTTGCACTTTAAGTGGCAGCATCTGATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
3UTR TCA 72 bp GTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGGTaGGATCATCAGATGCTGCCACTTAAAGTGCAACAG +
Preference number: 3 (lower is better)
Translates to: VQPDLEIYHLFR*DHQMLPLKVQQ
Trigger: CTGTTGCACTTTAAGTGGCAGCATCTGATGATCTCACCGAAAAAGATGGTAGATTTCCAAATCTGGCTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
3UTR CCA 72 bp ATAAACACAAGACCCAGGGAATGTGTCCCATGGAAGTaGAGTCCAGCCAGATTTGGAAATCTACCATCTTTT +
Preference number: 3 (lower is better)
Translates to: INTRPRECVPWK*SPARFGNLPSF
Trigger: AAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACATTCCCTGGGTCTTGTGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CAA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGATATATATATATGTATTaGCCTGGCTGTGGAGGCTCA +
Preference number: 3 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGYIYMY*PGCGGS
Trigger: TGAGCCTCCACAGCCAGGCAAATACATATATATATA...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CAA 90 bp TCTTTGAGGTTTGAAGAACCAGAAAATTGTTTTCTACGTGGCTCTAGAAAGGCCCCTGAAATCTTACCCTaGCCACTAGACTCCTTCAAC +
Preference number: 3 (lower is better)
Translates to: SLRFEEPENCFLRGSRKAPEILP*PLDSFN
Trigger: GTTGAAGGAGTCTAGTGGCAAGGGTAAGATTTCAGG...GGCCTTTCTAGAGCCACGTAGAAAACAATTTTCTGGTTCTTCAAACCTCAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR CCA 72 bp AGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTaGGACTCCAATTTGCATACAAATCAAAGACTGAAC +
Preference number: 3 (lower is better)
Translates to: RSVETVKIHAQH*DSNLHTNQRLN
Trigger: GTTCAGTCTTTGATTTGTATGCAAATTGGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CAA 90 bp AAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTGGAGTCCAGCCAGATTaGGAAATCTACCATCTTTTT +
Preference number: 3 (lower is better)
Translates to: KDPLLKVTGVRSGSRNLPGVQPD*EIYHLF
Trigger: AAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCC...AGGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
3UTR GCA 72 bp GACATTTTTGTTTTGGTCGTTTCCGTGTGTGTGCGCTaGAAGTCTCAGTGTGAAGTATATTTCTTACTGTGT +
Preference number: 3 (lower is better)
Translates to: DIFVLVVSVCVR*KSQCEVYFLLC
Trigger: ACACAGTAAGAAATATACTTCACACTGAGACTTGCAGCGCACACACACGGAAACGACCAAAACAAAAATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
3UTR-3UTR CAA 90 bp TCTTTGAGGTTTGAAGAACCAGAAAATTGTTTTCTACGTGGCTCTAGAAAGGCCTCATTCCTGACATCCTaGTCGTCTGTTCTTAACCAT +
Preference number: 3 (lower is better)
Translates to: SLRFEEPENCFLRGSRKASFLTS*SSVLNH
Trigger: ATGGTTAAGAACAGACGACAAGGATGTCAGGAATGA...GGCCTTTCTAGAGCCACGTAGAAAACAATTTTCTGGTTCTTCAAACCTCAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR GCA 72 bp TTTGTGACATTTTTGTTTTGGTCGTTTCCGTGTGTGTaGGCTGCAAGTCTCAGTGTGAAGTATATTTCTTAC +
Preference number: 3 (lower is better)
Translates to: FVTFLFWSFPCV*AASLSVKYISY
Trigger: GTAAGAAATATACTTCACACTGAGACTTGCAGCGCACACACACGGAAACGACCAAAACAAAAATGTCACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CCCTCAGGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCCTCGCTGCTGGTGCCTaGCTCGCCCTCCACCAGCCC +
Preference number: 4 (lower is better)
Translates to: PSGARELFLVSLAVPQSLLAAGA*LALHQP
Trigger: GGGCTGGTGGAGGGCGAGGCAGGCACCAGCAGCGAG...GAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCCTGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp GTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAGACAGCCTCGTAGCAAGCCCTaGGGCGGTCAGACAGTGGGG +
Preference number: 4 (lower is better)
Translates to: VSLAVPQSLVASPEAVRQPRSKP*GGQTVG
Trigger: CCCCACTGTCTGACCGCCTCAGGGCTTGCTACGAGG...CTGTCTGACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAGACAGCGGGGTTCTTCTCGCTaGTGGTGCCTGCCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: VSLAVPQSLVASPEAVRQRGSSR*WCLPRP
Trigger: AGGGCGAGGCAGGCACCAGCAGCGAGAAGAACCCCG...CTGTCTGACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAGACAGGGTCCACTCTGGCGCTaGCTTCCTTCCCGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: VSLAVPQSLVASPEAVRQGPLWR*LPSRPP
Trigger: CGGAGGACGGGAAGGAAGCCAGCGCCAGAGTGGACC...CTGTCTGACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563236.6
CDS-3UTR CCA 90 bp TTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCGGAGCCCCCAAGCTCTaGGCCCAGACTCCGGGAGAT +
Preference number: 4 (lower is better)
Translates to: FLVSLAVPQSLVASPEAVGAPKL*AQTPGD
Trigger: ATCTCCCGGAGTCTGGGCCCAGAGCTTGGGGGCTCC...GACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCGGTGCCCCATACTCCTaGAGCAGGTCCCGCACGGTC +
Preference number: 4 (lower is better)
Translates to: FLVSLAVPQSLVASPEAVGAPYS*SRSRTV
Trigger: GACCGTGCGGGACCTGCTCCAGGAGTATGGGGCACC...GACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAGGGCAGAGGAGAGGGTaGCCCCGAAGATGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: GARELFLVSLAVPQSLVAGQRRG*PRRCQP
Trigger: CGGCTGGCATCTTCGGGGCCACCCTCTCCTCTGCCC...TGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAGACAGGGAGGTCTGAGGTCCTaGGACAGGGTCTCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: VSLAVPQSLVASPEAVRQGGLRS*DRVSSQ
Trigger: CTGGCTGGAGACCCTGTCCCAGGACCTCAGACCTCC...CTGTCTGACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp GTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAGACAGCCAGACTCCGGGAGATaGGGAAGTAGGTGCCACCTG +
Preference number: 4 (lower is better)
Translates to: VSLAVPQSLVASPEAVRQPDSGR*GSRCHL
Trigger: CAGGTGGCACCTACTTCCTCATCTCCCGGAGTCTGG...CTGTCTGACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp CCCTCAGGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCCAAAGCGCCAGAGACTaGTGGCCTGGCACCTCTGGC +
Preference number: 4 (lower is better)
Translates to: PSGARELFLVSLAVPQSLQSARD*WPGTSG
Trigger: GCCAGAGGTGCCAGGCCATCAGTCTCTGGCGCTTTG...GAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCCTGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438926.6
CDS-3UTR CCA 90 bp GTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAGACAGCAGTCATCTCGTGGCTaGGCCGGCTGTCAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: VSLAVPQSLVASPEAVRQQSSRG*AGCQRP
Trigger: TGGCCTTTGACAGCCGGCCCAGCCACGAGATGACTG...CTGTCTGACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAGGACGATGCCTGCCTaGGCCGTAATCCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: FLVSLAVPQSLVASPEAVRTMPA*AVIQGS
Trigger: GCTGCCCTGGATTACGGCCCAGGCAGGCATCGTCCT...GACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAGACAGGAAGAAGGTGCCATCTaGACCCCGCCAGTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: VSLAVPQSLVASPEAVRQEEGAI*TPPVRH
Trigger: GTGCCTGACTGGCGGGGTCCAGATGGCACCTTCTTC...CTGTCTGACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAGACAGCGCAGGAGCCAATGGTaGCTGAGATGGCCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: VSLAVPQSLVASPEAVRQRRSQW*LRWPGR
Trigger: CCTACCTGGCCATCTCAGCCACCATTGGCTCCTGCG...CTGTCTGACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CCCTCAGGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGCCTGCATGAGGATCTaGACGCCTCTGCGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: PSGARELFLVSLAVPQSLACMRI*TPLRRS
Trigger: GGACCTCCGCAGAGGCGTCCAGATCCTCATGCAGGC...GAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCCTGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAGACAGCCATGTACAGCGAGCTaGGGCACTTCCCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: VSLAVPQSLVASPEAVRQPCTAS*GTSPSS
Trigger: GGAGGAAGGGGAAGTGCCCCAGCTCGCTGTACATGG...CTGTCTGACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAGACAGCCTTCACCAGGGCCTTaGGGTCCAAAGCGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: VSLAVPQSLVASPEAVRQPSPGP*GPKRQR
Trigger: TCTCTGGCGCTTTGGACCCCAAGGCCCTGGTGAAGG...CTGTCTGACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438926.6
CDS-3UTR CCA 90 bp GTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAGACAGAATGACACCCAGCCGTaGCCTTTCCCCAGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: VSLAVPQSLVASPEAVRQNDTQP*PFPSSA
Trigger: GGCTGAGCTGGGGAAAGGCCACGGCTGGGTGTCATT...CTGTCTGACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCGGCTTCAGAGCAGCCTaGGAGCCCCAAGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: FLVSLAVPQSLVASPEAVGFRAA*EPQAFW
Trigger: CCAGAAGGCTTGGGGCTCCCAGGCTGCTCTGAAGCC...GACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR CAA 72 bp GGTCCCTCAGGAGCACGAGAGCTGTTCCTAGTCAGCTaGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: GPSGARELFLVS*AVPQSLVASPE
Trigger: CTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCCTGAGGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp TTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCGAATCATCACCCCCTTaGCCCAGCCGAAGCGCACTG +
Preference number: 4 (lower is better)
Translates to: FLVSLAVPQSLVASPEAVESSPP*PSRSAL
Trigger: CAGTGCGCTTCGGCTGGGTCAAGGGGGTGATGATTC...GACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAGACAGGGTCCGATGAGCACGTaGCCACAGATCATCAGGCTG +
Preference number: 4 (lower is better)
Translates to: VSLAVPQSLVASPEAVRQGPMST*PQIIRL
Trigger: CAGCCTGATGATCTGTGGCCACGTGCTCATCGGACC...CTGTCTGACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCACCTTGGGGTCCACTCTaGCGCTGGCTTCCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: GARELFLVSLAVPQSLVAPWGPL*RWLPSR
Trigger: ACGGGAAGGAAGCCAGCGCCAGAGTGGACCCCAAGG...TGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563236.6
CDS-3UTR CCA 90 bp TTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAATGACACCCAGCCGTaGCCTTTCCCCAGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: FLVSLAVPQSLVASPEAVNDTQP*PFPSSA
Trigger: GGCTGAGCTGGGGAAAGGCCACGGCTGGGTGTCATT...GACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAGACAGCAGAATCCAGCTCAATaGCTGGGAGGCAGGCCCATC +
Preference number: 4 (lower is better)
Translates to: VSLAVPQSLVASPEAVRQQNPAQ*LGGRPI
Trigger: GATGGGCCTGCCTCCCAGCCATTGAGCTGGATTCTG...CTGTCTGACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp GTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAGACAGCTGGGAAAATGGCAATaGCACCCAGCCGTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: VSLAVPQSLVASPEAVRQLGKWQ*HPAVAF
Trigger: AAAGGCCACGGCTGGGTGTCATTGCCATTTTCCCAG...CTGTCTGACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCATGCGCATGCAGAAGGTaGTGCTGTGGGTCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: GARELFLVSLAVPQSLVACACRR*CCGSGG
Trigger: GCCACCTGACCCACAGCAGCACCTTCTGCATGCGCA...TGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp TTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCCATTCTCCCGAGACCTaGGGCCTGCATGAGGATCTG +
Preference number: 4 (lower is better)
Translates to: FLVSLAVPQSLVASPEAVHSPET*GLHEDL
Trigger: CAGATCCTCATGCAGGCCGCAGGTCTCGGGAGAATG...GACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GAGCCTGTAGGTCCTACAGGTGAGGCTCCCATTCTCCTATTGGAGGAAGCAGGGGCAGGTCAGCCAGTGTaGGCCGGACCTTCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: EPVGPTGEAPILLLEEAGAGQPV*AGPSGA
Trigger: AGCCCCGGAAGGTCCGGCCCACACTGGCTGACCTGC...CCCTGCTTCCTCCAATAGGAGAATGGGAGCCTCACCTGTAGGACCTACAGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCACCGTTGGCGATGAGCTaGAGCTCAGGCATCCTCTGC +
Preference number: 4 (lower is better)
Translates to: GARELFLVSLAVPQSLVAPLAMS*SSGILC
Trigger: GCAGAGGATGCCTGAGCTCCAGCTCATCGCCAACGG...TGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAGACAGCTTCCCGTCCTCCGCTaGGTCAAACACGGGGTTAAT +
Preference number: 4 (lower is better)
Translates to: VSLAVPQSLVASPEAVRQLPVLR*VKHGVN
Trigger: ATTAACCCCGTGTTTGACCCAGCGGAGGACGGGAAG...CTGTCTGACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAGCTCCGACTGGAAGATaGTGGTGGCCTGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GARELFLVSLAVPQSLVAAPTGR*WWPAPP
Trigger: AGGAGGAGCAGGCCACCACCATCTTCCAGTCGGAGC...TGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCACAGAGACTGATGGCCTaGCACCTCTGGCGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: GARELFLVSLAVPQSLVAQRLMA*HLWRWL
Trigger: AAGCCAGCGCCAGAGGTGCCAGGCCATCAGTCTCTG...TGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438926.6
CDS-3UTR TCA 90 bp GAGCCTGTAGGTCCTACAGGTGAGGCTCCCATTCTCCTATTGGAGGAAGCAGGGCGAAGATGCCAGCCGTaGTCAGGGGCGCGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: EPVGPTGEAPILLLEEAGRRCQP*SGARSL
Trigger: CAGGCTTCGCGCCCCTGATCACGGCTGGCATCTTCG...CCCTGCTTCCTCCAATAGGAGAATGGGAGCCTCACCTGTAGGACCTACAGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp TTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCGTGGGTCCCCACCCATaGGTGGATCCCAAAGTCATT +
Preference number: 4 (lower is better)
Translates to: FLVSLAVPQSLVASPEAVVGPHP*VDPKVI
Trigger: AATGACTTTGGGATCCACTCATGGGTGGGGACCCAC...GACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCAAAGGTGCGCATaGAGAAGGTGCTGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: GARELFLVSLAVPQSLVASQRCA*RRCCCG
Trigger: CCCACAGCAGCACCTTCTGCATGCGCACCTTTGGCT...TGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CCCTCAGGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCCACGGATCTTGCATTTaGTCCACCTCCTCTTGCGGC +
Preference number: 4 (lower is better)
Translates to: PSGARELFLVSLAVPQSLHGSCI*STSSCG
Trigger: GCCGCAAGAGGAGGTGGAGCAAATGCAAGATCCGTG...GAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCCTGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAGCTCTTTCCATCTCTTaGAGGTGGCTCCTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GARELFLVSLAVPQSLVAALSIS*RWLLLP
Trigger: GGGGAGGAGGAGCCACCTGCAAGAGATGGAAAGAGC...TGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCCCTTTCACCTGGTCTTaGGCTAGGCTTGGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: FLVSLAVPQSLVASPEAVPFTWS*ARLGLD
Trigger: GTCCAAGCCAAGCCTAGCCCAAGACCAGGTGAAAGG...GACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp TTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCGAAGTAGGTGCCACCTaGCTTGACCTTGCCATTGGT +
Preference number: 4 (lower is better)
Translates to: FLVSLAVPQSLVASPEAVEVGAT*LDLAIG
Trigger: ACCAATGGCAAGGTCAAGTCAGGTGGCACCTACTTC...GACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp GTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAGACAGTGTAGGTCCTACAGGTaGGGCTCCCATTCTCCTATT +
Preference number: 4 (lower is better)
Translates to: VSLAVPQSLVASPEAVRQCRSYR*GSHSPI
Trigger: AATAGGAGAATGGGAGCCTCACCTGTAGGACCTACA...CTGTCTGACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp GGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCACTGGGAAAATGGCAATaGCACCCAGCCGTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: GARELFLVSLAVPQSLVALGKWQ*HPAVAF
Trigger: AAAGGCCACGGCTGGGTGTCATTGCCATTTTCCCAG...TGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GAGCCTGTAGGTCCTACAGGTGAGGCTCCCATTCTCCTATTGGAGGAAGCAGGGTCTTCTCGCTGCTGGTaGCTGCCTCGCCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: EPVGPTGEAPILLLEEAGSSRCW*LPRPPP
Trigger: TGGTGGAGGGCGAGGCAGGCACCAGCAGCGAGAAGA...CCCTGCTTCCTCCAATAGGAGAATGGGAGCCTCACCTGTAGGACCTACAGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAGACAGGGGTTAATGTGCGCCTaGATCATCTTGGACACGTTG +
Preference number: 4 (lower is better)
Translates to: VSLAVPQSLVASPEAVRQGLMCA*IILDTL
Trigger: CAACGTGTCCAAGATGATGCAGGCGCACATTAACCC...CTGTCTGACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GAGCCTGTAGGTCCTACAGGTGAGGCTCCCATTCTCCTATTGGAGGAAGCAGGGAGCCCACCGTGTGCATaGCCACACCCACGGCATTGG +
Preference number: 4 (lower is better)
Translates to: EPVGPTGEAPILLLEEAGSPPCA*PHPRHW
Trigger: CCAATGCCGTGGGTGTGGCCATGCACACGGTGGGCT...CCCTGCTTCCTCCAATAGGAGAATGGGAGCCTCACCTGTAGGACCTACAGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCCAATGGTGGCTGAGATaGCCAGGTAGGAAATGGTCG +
Preference number: 4 (lower is better)
Translates to: FLVSLAVPQSLVASPEAVQWWLR*PGRKWS
Trigger: CGACCATTTCCTACCTGGCCATCTCAGCCACCATTG...GACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GAGCCTGTAGGTCCTACAGGTGAGGCTCCCATTCTCCTATTGGAGGAAGCAGGGGCCTGCATGAGGATCTaGACGCCTCTGCGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: EPVGPTGEAPILLLEEAGACMRI*TPLRRS
Trigger: GGACCTCCGCAGAGGCGTCCAGATCCTCATGCAGGC...CCCTGCTTCCTCCAATAGGAGAATGGGAGCCTCACCTGTAGGACCTACAGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAGACAGGTGAGCACGTTTTCCTaGTTTCCTCGGATCAGGATG +
Preference number: 4 (lower is better)
Translates to: VSLAVPQSLVASPEAVRQVSTFS*FPRIRM
Trigger: CATCCTGATCCGAGGAAACCAGGAAAACGTGCTCAC...CTGTCTGACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAGACAGTGTGTCCCATGGAAGTaGAGTCCAGCCAGATTTGGA +
Preference number: 4 (lower is better)
Translates to: VSLAVPQSLVASPEAVRQCVPWK*SPARFG
Trigger: TCCAAATCTGGCTGGACTCCACTTCCATGGGACACA...CTGTCTGACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CCCTCAGGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCCCCGGTGAGATGAGCTaGGAAAATGGCAATGACACC +
Preference number: 4 (lower is better)
Translates to: PSGARELFLVSLAVPQSLPGEMS*ENGNDT
Trigger: GGTGTCATTGCCATTTTCCCAGCTCATCTCACCGGG...GAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCCTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp CCCTCAGGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTTGTAGTATTGGAATaGAGGTCTCCACCCAGGCGA +
Preference number: 4 (lower is better)
Translates to: PSGARELFLVSLAVPQSLVVVLE*RSPPRR
Trigger: TCGCCTGGGTGGAGACCTTCATTCCAATACTACAAC...GAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCCTGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp GGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAGACAGAAGAAATGCTTaGACCCGGGAGGAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: GARELFLVSLAVPQSLVADRRNA*TREEVA
Trigger: TGCAACCTCCTCCCGGGTTCAAGCATTTCTTCTGTC...TGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp CCCTCAGGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCTGCTTTTCTTCCCGGTaGGATGAGCTGGGAAAATGG +
Preference number: 4 (lower is better)
Translates to: PSGARELFLVSLAVPQSLCFSSR*DELGKW
Trigger: CCATTTTCCCAGCTCATCTCACCGGGAAGAAAAGCA...GAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCCTGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCACGGGCTCCTTGTTCTTaGCATAGCCTTTGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: GARELFLVSLAVPQSLVARAPCS*HSLCRR
Trigger: TCTTCGGCAAAGGCTATGGCAAGAACAAGGAGCCCG...TGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CCCTCAGGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCTGTCTATGGTCTTCTTaGCCTGCTCCGACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: PSGARELFLVSLAVPQSLCLWSS*PAPTGR
Trigger: TCTTCCAGTCGGAGCAGGGCAAGAAGACCATAGACA...GAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCCTGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp AATGCAAGGCACAACAGAAAGGTGGCCATGCCTTTCAAATGTGTGGGTCCCCACGGGCAGAGGAGAGGGTaGCCCCGAAGATGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: NARHNRKVAMPFKCVGPHGQRRG*PRRCQP
Trigger: CGGCTGGCATCTTCGGGGCCACCCTCTCCTCTGCCC...GTGGGGACCCACACATTTGAAAGGCATGGCCACCTTTCTGTTGTGCCTTGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCACACACTCAGAGCTGTaGACAGGGATGTCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: FLVSLAVPQSLVASPEAVTHSEL*TGMSKP
Trigger: AGGCTTTGACATCCCTGTCCACAGCTCTGAGTGTGT...GACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp CACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCCAGGGGCGCGAAGCCTaGCACCATGCTCATGGTCTG +
Preference number: 4 (lower is better)
Translates to: HPGRSVETVKIHAQHWDSQGREA*HHAHGL
Trigger: CAGACCATGAGCATGGTGTCAGGCTTCGCGCCCCTG...GGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp CCCTCAGGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCACTGGCAGTAAAAGGTaGGCACGTTTTCCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: PSGARELFLVSLAVPQSLTGSKR*ARFPGF
Trigger: GAAACCAGGAAAACGTGCTCACCTTTTACTGCCAGT...GAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCCTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp GGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCATTCTTCCCGGTGAGATaGGCTGGGAAAATGGCAATG +
Preference number: 4 (lower is better)
Translates to: GARELFLVSLAVPQSLVAFFPVR*AGKMAM
Trigger: CATTGCCATTTTCCCAGCTCATCTCACCGGGAAGAA...TGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp TTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCCCACATCTTCATTCCTaGCATCCTTGTCGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: FLVSLAVPQSLVASPEAVPHLHS*HPCRLF
Trigger: GAACAGACGACAAGGATGTCAGGAATGAAGATGTGG...GACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp GTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAGACAGGGACCAAGGACTCTTTaGGGTTTGAAGAACCAGAAA +
Preference number: 4 (lower is better)
Translates to: VSLAVPQSLVASPEAVRQGPRTL*GLKNQK
Trigger: TTTCTGGTTCTTCAAACCTCAAAGAGTCCTTGGTCC...CTGTCTGACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp TTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCCGAAGCCTGACACCATaGTCATGGTCTGGTAATAGT +
Preference number: 4 (lower is better)
Translates to: FLVSLAVPQSLVASPEAVRSLTP*SWSGNS
Trigger: ACTATTACCAGACCATGAGCATGGTGTCAGGCTTCG...GACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GAGCCTGTAGGTCCTACAGGTGAGGCTCCCATTCTCCTATTGGAGGAAGCAGGGCCGACTGGAAGATGGTaGTGGCCTGCTCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: EPVGPTGEAPILLLEEAGPTGRW*WPAPPS
Trigger: TGAAGGAGGAGCAGGCCACCACCATCTTCCAGTCGG...CCCTGCTTCCTCCAATAGGAGAATGGGAGCCTCACCTGTAGGACCTACAGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GAGCCTGTAGGTCCTACAGGTGAGGCTCCCATTCTCCTATTGGAGGAAGCAGGGGTAACCCCAGCACTTTaGGAGACCGAGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: EPVGPTGEAPILLLEEAGVTPAL*ETEVGG
Trigger: TCCACCCACCTCGGTCTCCCAAAGTGCTGGGGTTAC...CCCTGCTTCCTCCAATAGGAGAATGGGAGCCTCACCTGTAGGACCTACAGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CCCTCAGGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGACGGGAGTGAGAAGTaGTTCAAGAAATTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: PSGARELFLVSLAVPQSLDGSEK*FKKFAW
Trigger: CCAGGCAAATTTCTTGAACCACTTCTCACTCCCGTC...GAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCCTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCATGGCCTGGCACCTCTaGCGCTGGCTTCCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: HPGRSVETVKIHAQHWDSMAWHL*RWLPSR
Trigger: ACGGGAAGGAAGCCAGCGCCAGAGGTGCCAGGCCAT...GGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438926.6
CDS-3UTR CCA 90 bp CCCTCAGGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCTTCTGGGCTTTGCAGTaGGATGACCTGAGAAATGCT +
Preference number: 4 (lower is better)
Translates to: PSGARELFLVSLAVPQSLFWALQ*DDLRNA
Trigger: AGCATTTCTCAGGTCATCCCACTGCAAAGCCCAGAA...GAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCCTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCGAGGCGGTCAGACAGTaGGGCTTCAGAGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: HPGRSVETVKIHAQHWDSEAVRQ*GFRAAW
Trigger: CCAGGCTGCTCTGAAGCCCCACTGTCTGACCGCCTC...GGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR CAA 72 bp CCCTCTCCTTTCACCTGGTCTTGGGCTAGGCTTGGCTaGGACCTGCTCCTGCCTATCTGTTCCTTGCCAACC +
Preference number: 4 (lower is better)
Translates to: PSPFTWSWARLG*DLLLPICSLPT
Trigger: GGTTGGCAAGGAACAGATAGGCAGGAGCAGGTCCAAGCCAAGCCTAGCCCAAGACCAGGTGAAAGGAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR CAA 72 bp TCCTCCCCTCTCCTTTCACCTGGTCTTGGGCTAGGCTaGGCTTGGACCTGCTCCTGCCTATCTGTTCCTTGC +
Preference number: 4 (lower is better)
Translates to: SSPLLSPGLGLG*AWTCSCLSVPC
Trigger: GCAAGGAACAGATAGGCAGGAGCAGGTCCAAGCCAAGCCTAGCCCAAGACCAGGTGAAAGGAGAGGGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR CAA 72 bp CTTGGCCTCACCCACTGGCATTCGATGGCAGTGCTCTaGCACCCTAGCTTTGGGGGCTCAAACACTGGGGAT +
Preference number: 4 (lower is better)
Translates to: LGLTHWHSMAVL*HPSFGGSNTGD
Trigger: ATCCCCAGTGTTTGAGCCCCCAAAGCTAGGGTGCAAGAGCACTGCCATCGAATGCCAGTGGGTGAGGCCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp CACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCGCTGGGTGCACTCGGTaGAGTTCCAGCCATAGCTGC +
Preference number: 4 (lower is better)
Translates to: HPGRSVETVKIHAQHWDSAGCTR*SSSHSC
Trigger: GCAGCTATGGCTGGAACTTCACCGAGTGCACCCAGC...GGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp TTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCCACACACGCCATAGTTaGAATCAAAGGCATCATGGA +
Preference number: 4 (lower is better)
Translates to: FLVSLAVPQSLVASPEAVHTRHS*NQRHHG
Trigger: TCCATGATGCCTTTGATTTCAACTATGGCGTGTGTG...GACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp TTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCGTTCTTAACCATGCCTaGAATCTTACCCTTGCCACT +
Preference number: 4 (lower is better)
Translates to: FLVSLAVPQSLVASPEAVVLNHA*NLTLAT
Trigger: AGTGGCAAGGGTAAGATTTCAGGCATGGTTAAGAAC...GACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GCTATTTCTCTAGCCTATAAACACAAGACCCAGGGAATGTGTCCCATGGAAGTGCTCGCTGCTGGTGCCTaGCTCGCCCTCCACCAGCCC +
Preference number: 4 (lower is better)
Translates to: AISLAYKHKTQGMCPMEVLAAGA*LALHQP
Trigger: GGGCTGGTGGAGGGCGAGGCAGGCACCAGCAGCGAG...CACTTCCATGGGACACATTCCCTGGGTCTTGTGTTTATAGGCTAGAGAAATAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp AATGCAAGGCACAACAGAAAGGTGGCCATGCCTTTCAAATGTGTGGGTCCCCACTCTTCTCGCTGCTGGTaGCTGCCTCGCCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: NARHNRKVAMPFKCVGPHSSRCW*LPRPPP
Trigger: TGGTGGAGGGCGAGGCAGGCACCAGCAGCGAGAAGA...GTGGGGACCCACACATTTGAAAGGCATGGCCACCTTTCTGTTGTGCCTTGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp AATGCAAGGCACAACAGAAAGGTGGCCATGCCTTTCAAATGTGTGGGTCCCCACGCAAAGCCCACCGTGTaGATGGCCACACCCACGGCA +
Preference number: 4 (lower is better)
Translates to: NARHNRKVAMPFKCVGPHAKPTV*MATPTA
Trigger: TGCCGTGGGTGTGGCCATGCACACGGTGGGCTTTGC...GTGGGGACCCACACATTTGAAAGGCATGGCCACCTTTCTGTTGTGCCTTGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GGGAATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTGCAGGTCAGCCAGTGTaGGCCGGACCTTCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: GNVSHGSGVQPDLEIYHLAGQPV*AGPSGA
Trigger: AGCCCCGGAAGGTCCGGCCCACACTGGCTGACCTGC...AAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGCAGGTCAGCCAGTGTaGGCCGGACCTTCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALAGQPV*AGPSGA
Trigger: AGCCCCGGAAGGTCCGGCCCACACTGGCTGACCTGC...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCCCACGCAGGAGCCAATaGTGGCTGAGATGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: HPGRSVETVKIHAQHWDSPRRSQ*WLRWPG
Trigger: ACCTGGCCATCTCAGCCACCATTGGCTCCTGCGTGG...GGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TGTGGACTAGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGAGGGCAGAGGAGAGGGTaGCCCCGAAGATGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: CGLEAIKFQLIPHTQSCGGQRRG*PRRCQP
Trigger: CGGCTGGCATCTTCGGGGCCACCCTCTCCTCTGCCC...TCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCTAGTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp AGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAGGGATGCAGGGGCGCGAAGCCTaGCACCATGCTCATGGTCTG +
Preference number: 4 (lower is better)
Translates to: RGNQVPTYPTHSELWTGMQGREA*HHAHGL
Trigger: CAGACCATGAGCATGGTGTCAGGCTTCGCGCCCCTG...CATCCCTGTCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGCGAAGATGCCAGCCGTaGTCAGGGGCGCGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALRRCQP*SGARSL
Trigger: CAGGCTTCGCGCCCCTGATCACGGCTGGCATCTTCG...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp AATGCAAGGCACAACAGAAAGGTGGCCATGCCTTTCAAATGTGTGGGTCCCCACGCTTGTGGGGTCCGATaGGCACGTGGCCACAGATCA +
Preference number: 4 (lower is better)
Translates to: NARHNRKVAMPFKCVGPHACGVR*ARGHRS
Trigger: TGATCTGTGGCCACGTGCTCATCGGACCCCACAAGC...GTGGGGACCCACACATTTGAAAGGCATGGCCACCTTTCTGTTGTGCCTTGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp GAGCCTGTAGGTCCTACAGGTGAGGCTCCCATTCTCCTATTGGAGGAAGCAGGGCGTAATCTCCTCATCTaGGATCTTCCAGGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: EPVGPTGEAPILLLEEAGRNLLI*DLPGAV
Trigger: GACTGCCCCTGGAAGATCTCAGATGAGGAGATTACG...CCCTGCTTCCTCCAATAGGAGAATGGGAGCCTCACCTGTAGGACCTACAGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp CACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCCAACGTGTAGTGACCTaGAGGCCTTCCGTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: HPGRSVETVKIHAQHWDSQRVVT*RPSVSQ
Trigger: CTGGCTCACGGAAGGCCTTCAGGTCACTACACGTTG...GGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp TGTGGACTAGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACCTCGTAGCAAGCCCTaGGGCGGTCAGACAGTGGGG +
Preference number: 4 (lower is better)
Translates to: CGLEAIKFQLIPHTQSCGPRSKP*GGQTVG
Trigger: CCCCACTGTCTGACCGCCTCAGGGCTTGCTACGAGG...TCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCTAGTCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp ATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCCTCGCTGCTGGTGCCTaGCTCGCCCTCCACCAGCCC +
Preference number: 4 (lower is better)
Translates to: MCPMEVESSQIWKSTIFFLAAGA*LALHQP
Trigger: GGGCTGGTGGAGGGCGAGGCAGGCACCAGCAGCGAG...GAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGCGGGGTTCTTCTCGCTaGTGGTGCCTGCCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALRGSSR*WCLPRP
Trigger: AGGGCGAGGCAGGCACCAGCAGCGAGAAGAACCCCG...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GAGCCTGTAGGTCCTACAGGTGAGGCTCCCATTCTCCTATTGGAGGAAGCAGGGCGGGCTCCTTGTTCTTaGCATAGCCTTTGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: EPVGPTGEAPILLLEEAGRAPCS*HSLCRR
Trigger: TCTTCGGCAAAGGCTATGGCAAGAACAAGGAGCCCG...CCCTGCTTCCTCCAATAGGAGAATGGGAGCCTCACCTGTAGGACCTACAGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCAGCTCAGGCATCCTCTaGTTGTGGGGTCCGATGAGC +
Preference number: 4 (lower is better)
Translates to: HPGRSVETVKIHAQHWDSSSGIL*LWGPMS
Trigger: GCTCATCGGACCCCACAAGCAGAGGATGCCTGAGCT...GGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCTTCAGCCACTTGGTGTaGCCGTTGGCGATGAGCTGG +
Preference number: 4 (lower is better)
Translates to: HPGRSVETVKIHAQHWDSFSHLV*PLAMSW
Trigger: CCAGCTCATCGCCAACGGGCACACCAAGTGGCTGAA...GGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCCGATGGCAGTGCTCTTaGACCCTAGCTTTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: HPGRSVETVKIHAQHWDSRWQCS*TLALGA
Trigger: AGCCCCCAAAGCTAGGGTGCAAGAGCACTGCCATCG...GGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GGGAATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTGGTGCCCCATACTCCTaGAGCAGGTCCCGCACGGTC +
Preference number: 4 (lower is better)
Translates to: GNVSHGSGVQPDLEIYHLGAPYS*SRSRTV
Trigger: GACCGTGCGGGACCTGCTCCAGGAGTATGGGGCACC...AAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACATTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp AATGCAAGGCACAACAGAAAGGTGGCCATGCCTTTCAAATGTGTGGGTCCCCACCCACGCAGGAGCCAATaGTGGCTGAGATGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: NARHNRKVAMPFKCVGPHPRRSQ*WLRWPG
Trigger: ACCTGGCCATCTCAGCCACCATTGGCTCCTGCGTGG...GTGGGGACCCACACATTTGAAAGGCATGGCCACCTTTCTGTTGTGCCTTGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCGCCCCAATTTACCTCTaGCTTCTTGTAGATGACATA +
Preference number: 4 (lower is better)
Translates to: FLVSLAVPQSLVASPEAVAPIYL*LLVDDI
Trigger: TATGTCATCTACAAGAAGCCAGAGGTAAATTGGGGC...GACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp AATGCAAGGCACAACAGAAAGGTGGCCATGCCTTTCAAATGTGTGGGTCCCCACGGCATCCTCTGCTTGTaGGGTCCGATGAGCACGTGG +
Preference number: 4 (lower is better)
Translates to: NARHNRKVAMPFKCVGPHGILCL*GPMSTW
Trigger: CCACGTGCTCATCGGACCCCACAAGCAGAGGATGCC...GTGGGGACCCACACATTTGAAAGGCATGGCCACCTTTCTGTTGTGCCTTGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TGTGGACTAGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGAGGTCCACTCTGGCGCTaGCTTCCTTCCCGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: CGLEAIKFQLIPHTQSCGGPLWR*LPSRPP
Trigger: CGGAGGACGGGAAGGAAGCCAGCGCCAGAGTGGACC...TCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCTAGTCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262502.5
ENST00000563236.6
CDS-3UTR CCA 90 bp AATGCAAGGCACAACAGAAAGGTGGCCATGCCTTTCAAATGTGTGGGTCCCCACTTGCCCTGCTCCGACTaGAAGATGGTGGTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: NARHNRKVAMPFKCVGPHLPCSD*KMVVAC
Trigger: GCAGGCCACCACCATCTTCCAGTCGGAGCAGGGCAA...GTGGGGACCCACACATTTGAAAGGCATGGCCACCTTTCTGTTGTGCCTTGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TGTGGACTAGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGATGGCACCTCTGGCGCTaGCTTCCTTCCCGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: CGLEAIKFQLIPHTQSCGWHLWR*LPSRPP
Trigger: CGGAGGACGGGAAGGAAGCCAGCGCCAGAGGTGCCA...TCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCTAGTCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438926.6
3UTR CAA 72 bp AGGCTTGGCTTGGACCTGCTCCTGCCTATCTGTTCCTaGCCAACCTTGCCATCTCTACACCCCTCTCCACAT +
Preference number: 4 (lower is better)
Translates to: RLGLDLLLPICS*PTLPSLHPSPH
Trigger: ATGTGGAGAGGGGTGTAGAGATGGCAAGGTTGGCAAGGAACAGATAGGCAGGAGCAGGTCCAAGCCAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp CACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCAGGTGCCACCTGACTTaGCCTTGCCATTGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: HPGRSVETVKIHAQHWDSRCHLT*PCHWWR
Trigger: TCTCCACCAATGGCAAGGTCAAGTCAGGTGGCACCT...GGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp AGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAGGGATGCCAGACTCCGGGAGATaGGGAAGTAGGTGCCACCTG +
Preference number: 4 (lower is better)
Translates to: RGNQVPTYPTHSELWTGMPDSGR*GSRCHL
Trigger: CAGGTGGCACCTACTTCCTCATCTCCCGGAGTCTGG...CATCCCTGTCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp AGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAGGGATGGCTGGGTGCACTCGGTaGAGTTCCAGCCATAGCTGC +
Preference number: 4 (lower is better)
Translates to: RGNQVPTYPTHSELWTGMAGCTR*SSSHSC
Trigger: GCAGCTATGGCTGGAACTTCACCGAGTGCACCCAGC...CATCCCTGTCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp TGTGGACTAGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGAACCCAGGCGAGTTGGTaGTGGAGGCGTGGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: CGLEAIKFQLIPHTQSCGTQASW*WRRGSS
Trigger: GCTGCTTCCACGCCTCCATCACCAACTCGCCTGGGT...TCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCTAGTCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp GGGAATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTACCCAGGCGAGTTGGTaGTGGAGGCGTGGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: GNVSHGSGVQPDLEIYHLTQASW*WRRGSS
Trigger: GCTGCTTCCACGCCTCCATCACCAACTCGCCTGGGT...AAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACATTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGAGGCCCACCGAGTAGCTaGGGGCCAGGTTGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGGPPSS*GPGCRS
Trigger: GCTCCTACAACCTGGCCCTCAGCTACTCGGTGGGCC...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp TGTGGACTAGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGATGTGCCCGTTGGCGATaGGCTGGAGCTCAGGCATCC +
Preference number: 4 (lower is better)
Translates to: CGLEAIKFQLIPHTQSCGCARWR*AGAQAS
Trigger: GGATGCCTGAGCTCCAGCTCATCGCCAACGGGCACA...TCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCTAGTCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGAGACCTGCGGCCTGCATaGGGATCTGGACGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGDLRPA*GSGRLC
Trigger: GCAGAGGCGTCCAGATCCTCATGCAGGCCGCAGGTC...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp CACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCCCTGAAGGCCTTCCGTaGGCCAGGTATAGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: HPGRSVETVKIHAQHWDSPEGLP*ARYRSF
Trigger: AAAGGACCTATACCTGGCTCACGGAAGGCCTTCAGG...GGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGGTGGCTGGGGTGGCTaGTGTCATAGGCAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALGGWGG*CHRQLV
Trigger: CACCAGCTGCCTATGACAGCAGCCACCCCAGCCACC...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGTCTTCTCGCTGCTGGTaGCTGCCTCGCCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALSSRCW*LPRPPP
Trigger: TGGTGGAGGGCGAGGCAGGCACCAGCAGCGAGAAGA...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp TTATTTCGAGTTAAGAATTATCCCAGAATCCAGCTCAATGGCTGGGAGGCAGGCCGGGGTTCTTCTCGCTaGTGGTGCCTGCCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: LFRVKNYPRIQLNGWEAGRGSSR*WCLPRP
Trigger: AGGGCGAGGCAGGCACCAGCAGCGAGAAGAACCCCG...GCCTGCCTCCCAGCCATTGAGCTGGATTCTGGGATAATTCTTAACTCGAAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGGTCAGGACGATGCCTaGCTGGGCCGTAATCCAGGG +
Preference number: 4 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALGQDDA*LGRNPG
Trigger: CCCTGGATTACGGCCCAGGCAGGCATCGTCCTGACC...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGATGGCCCCTGCCAGGATaGCTGTGGCCGAGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGWPLPG*LWPRGR
Trigger: TCTTCCCCTCGGCCACAGGCATCCTGGCAGGGGCCA...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp TGTGGACTAGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGAAGTTCCAGCCATAGCTaGAGGCCAGCCCCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: CGLEAIKFQLIPHTQSCGSSSHS*RPAPRR
Trigger: CCTGCGAGGGGCTGGCCTGCAGCTATGGCTGGAACT...TCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCTAGTCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGAGTTCCAGCCATAGCTaGAGGCCAGCCCCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALSSSHS*RPAPRR
Trigger: CCTGCGAGGGGCTGGCCTGCAGCTATGGCTGGAACT...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp TGTGGACTAGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACCTGCCAGCCCCCTCTaGCGCCTGCTCTTTCCATCT +
Preference number: 4 (lower is better)
Translates to: CGLEAIKFQLIPHTQSCGPASPL*RLLFPS
Trigger: AGATGGAAAGAGCAGGCGGCAGAGGGGGCTGGCAGG...TCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCTAGTCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GCTATTTCTCTAGCCTATAAACACAAGACCCAGGGAATGTGTCCCATGGAAGTGTTAACAGCCCCTCCCTaGCAGCCCCCTCTGCCGCCT +
Preference number: 4 (lower is better)
Translates to: AISLAYKHKTQGMCPMEVLTAPP*QPPLPP
Trigger: AGGCGGCAGAGGGGGCTGGCAGGGAGGGGCTGTTAA...CACTTCCATGGGACACATTCCCTGGGTCTTGTGTTTATAGGCTAGAGAAATAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CTTTCAAATGTGTGGGTCCCCACCCATGAGTGGATCCCAAAGTCATTTTATTGGGCCCGCTGCACAAAGTaGCGTCCCCAGGCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LSNVWVPTHEWIPKSFYWARCTK*RPQASL
Trigger: CAGAGACGCCTGGGGACGCCACTTTGTGCAGCGGGC...CCAATAAAATGACTTTGGGATCCACTCATGGGTGGGGACCCACACATTTGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCGCTGTCATAGGCAGCTaGTGGAGAGGGCTCATCACT +
Preference number: 4 (lower is better)
Translates to: HPGRSVETVKIHAQHWDSAVIGS*WRGLIT
Trigger: AGTGATGAGCCCTCTCCACCAGCTGCCTATGACAGC...GGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGCCAGCCGAAGCGCACTaGCTCCTCGGGGTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALPAEAH*LLGVLL
Trigger: GAGAAGAACCCCGAGGAGCCAGTGCGCTTCGGCTGG...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GGGAATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTCCAGCCGAAGCGCACTaGCTCCTCGGGGTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: GNVSHGSGVQPDLEIYHLPAEAH*LLGVLL
Trigger: GAGAAGAACCCCGAGGAGCCAGTGCGCTTCGGCTGG...AAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACATTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCTGCCATTGGTGGAGATaGCTGAGATGGAGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: HPGRSVETVKIHAQHWDSCHWWR*LRWRGL
Trigger: CAGGCCTCTCCATCTCAGCCATCTCCACCAATGGCA...GGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CTTTCAAATGTGTGGGTCCCCACCCATGAGTGGATCCCAAAGTCATTTTATTGGGGAGCCCCCAAGCTCTaGGCCCAGACTCCGGGAGAT +
Preference number: 4 (lower is better)
Translates to: LSNVWVPTHEWIPKSFYWGAPKL*AQTPGD
Trigger: ATCTCCCGGAGTCTGGGCCCAGAGCTTGGGGGCTCC...CCAATAAAATGACTTTGGGATCCACTCATGGGTGGGGACCCACACATTTGAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TTATTTCGAGTTAAGAATTATCCCAGAATCCAGCTCAATGGCTGGGAGGCAGGCGGTGCCCCATACTCCTaGAGCAGGTCCCGCACGGTC +
Preference number: 4 (lower is better)
Translates to: LFRVKNYPRIQLNGWEAGGAPYS*SRSRTV
Trigger: GACCGTGCGGGACCTGCTCCAGGAGTATGGGGCACC...GCCTGCCTCCCAGCCATTGAGCTGGATTCTGGGATAATTCTTAACTCGAAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GGGAATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTGGCCTTGTCCTCAGATaGGGGGATCAGCGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: GNVSHGSGVQPDLEIYHLGLVLR*GDQRPH
Trigger: GTGGGGACGCTGATCCCCCCATCTGAGGACAAGGCC...AAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACATTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp AGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAGGGATGCGCAGGAGCCAATGGTaGCTGAGATGGCCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: RGNQVPTYPTHSELWTGMRRSQW*LRWPGR
Trigger: CCTACCTGGCCATCTCAGCCACCATTGGCTCCTGCG...CATCCCTGTCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp AGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAGGGATGCCGTTGGCGATGAGCTaGAGCTCAGGCATCCTCTGC +
Preference number: 4 (lower is better)
Translates to: RGNQVPTYPTHSELWTGMPLAMS*SSGILC
Trigger: GCAGAGGATGCCTGAGCTCCAGCTCATCGCCAACGG...CATCCCTGTCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCTCGGATCAGGATGACTaGAGGTCTGAGGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: HPGRSVETVKIHAQHWDSSDQDD*RSEVLG
Trigger: TCCCAGGACCTCAGACCTCCAGTCATCCTGATCCGA...GGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GAGCCTGTAGGTCCTACAGGTGAGGCTCCCATTCTCCTATTGGAGGAAGCAGGGTGGGGGCTCAAACACTaGGGATGTTCAACGTGTAGT +
Preference number: 4 (lower is better)
Translates to: EPVGPTGEAPILLLEEAGWGLKH*GCSTCS
Trigger: ACTACACGTTGAACATCCCCAGTGTTTGAGCCCCCA...CCCTGCTTCCTCCAATAGGAGAATGGGAGCCTCACCTGTAGGACCTACAGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp AGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAGGGATGATCCAGCTCAATGGCTaGGAGGCAGGCCCATCCTCC +
Preference number: 4 (lower is better)
Translates to: RGNQVPTYPTHSELWTGMIQLNG*EAGPSS
Trigger: GGAGGATGGGCCTGCCTCCCAGCCATTGAGCTGGAT...CATCCCTGTCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR CAA 72 bp TCCCAGCTATTCGGGAGGCTGAGACAGAAGAAATGCTaGAACCCGGGAGGAGGTTGCAGTGACCTGAGATCA +
Preference number: 4 (lower is better)
Translates to: SQLFGRLRQKKC*NPGGGCSDLRS
Trigger: TGATCTCAGGTCACTGCAACCTCCTCCCGGGTTCAAGCATTTCTTCTGTCTCAGCCTCCCGAATAGCTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp GCTATTTCTCTAGCCTATAAACACAAGACCCAGGGAATGTGTCCCATGGAAGTGACCCAGGCGAGTTGGTaGTGGAGGCGTGGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: AISLAYKHKTQGMCPMEVTQASW*WRRGSS
Trigger: GCTGCTTCCACGCCTCCATCACCAACTCGCCTGGGT...CACTTCCATGGGACACATTCCCTGGGTCTTGTGTTTATAGGCTAGAGAAATAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp GCTATTTCTCTAGCCTATAAACACAAGACCCAGGGAATGTGTCCCATGGAAGTGTGTGCCCGTTGGCGATaGGCTGGAGCTCAGGCATCC +
Preference number: 4 (lower is better)
Translates to: AISLAYKHKTQGMCPMEVCARWR*AGAQAS
Trigger: GGATGCCTGAGCTCCAGCTCATCGCCAACGGGCACA...CACTTCCATGGGACACATTCCCTGGGTCTTGTGTTTATAGGCTAGAGAAATAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp AGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAGGGATGGGAGGTCCTCGGCAATaGCATCCGAGTAGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: RGNQVPTYPTHSELWTGMGGPRQ*HPSRRP
Trigger: AGGCCTTCTACTCGGATGTCATTGCCGAGGACCTCC...CATCCCTGTCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp ATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGACCTGCGGCCTGCATaGGGATCTGGACGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: MCPMEVESSQIWKSTIFFDLRPA*GSGRLC
Trigger: GCAGAGGCGTCCAGATCCTCATGCAGGCCGCAGGTC...GAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp GAGCCTGTAGGTCCTACAGGTGAGGCTCCCATTCTCCTATTGGAGGAAGCAGGGACTGCCAGTTCTTCTTaGACCCAACCACCAGAATGT +
Preference number: 4 (lower is better)
Translates to: EPVGPTGEAPILLLEEAGTASSS*TQPPEC
Trigger: ACATTCTGGTGGTTGGGTTCAAGAAGAACTGGCAGT...CCCTGCTTCCTCCAATAGGAGAATGGGAGCCTCACCTGTAGGACCTACAGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp GAGCCTGTAGGTCCTACAGGTGAGGCTCCCATTCTCCTATTGGAGGAAGCAGGGCGTCCAAAGAACCAGTaGAGACATCAAAGACCCCTT +
Preference number: 4 (lower is better)
Translates to: EPVGPTGEAPILLLEEAGRPKNQ*RHQRPL
Trigger: AAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACG...CCCTGCTTCCTCCAATAGGAGAATGGGAGCCTCACCTGTAGGACCTACAGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp TTATTTCGAGTTAAGAATTATCCCAGAATCCAGCTCAATGGCTGGGAGGCAGGCGCAAAGCCCACCGTGTaGATGGCCACACCCACGGCA +
Preference number: 4 (lower is better)
Translates to: LFRVKNYPRIQLNGWEAGAKPTV*MATPTA
Trigger: TGCCGTGGGTGTGGCCATGCACACGGTGGGCTTTGC...GCCTGCCTCCCAGCCATTGAGCTGGATTCTGGGATAATTCTTAACTCGAAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp TTATTTCGAGTTAAGAATTATCCCAGAATCCAGCTCAATGGCTGGGAGGCAGGCGGGGTCCACGATGGGTaGCCCATACTCCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LFRVKNYPRIQLNGWEAGGVHDG*PILLEQ
Trigger: CTGCTCCAGGAGTATGGGGCACCCATCGTGGACCCC...GCCTGCCTCCCAGCCATTGAGCTGGATTCTGGGATAATTCTTAACTCGAAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CAAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTGGCCCCTGCCAGGATaGCTGTGGCCGAGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: QRPLIESDGSEKWFKKFAWPLPG*LWPRGR
Trigger: TCTTCCCCTCGGCCACAGGCATCCTGGCAGGGGCCA...GGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp AGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAGGGATGTTCAGCCACTTGGTGTaGCCGTTGGCGATGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RGNQVPTYPTHSELWTGMFSHLV*PLAMSW
Trigger: CCAGCTCATCGCCAACGGGCACACCAAGTGGCTGAA...CATCCCTGTCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGAAGATGGTGGTGGCCTaGTCCTCCTTCACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALKMVVA*SSFTRA
Trigger: GGCCCTGGTGAAGGAGGAGCAGGCCACCACCATCTT...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GGGAATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTAAGATGGTGGTGGCCTaGTCCTCCTTCACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GNVSHGSGVQPDLEIYHLKMVVA*SSFTRA
Trigger: GGCCCTGGTGAAGGAGGAGCAGGCCACCACCATCTT...AAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp AATGCAAGGCACAACAGAAAGGTGGCCATGCCTTTCAAATGTGTGGGTCCCCACTGCTCCACCTCCTCTTaGGGCCAAGGAGATAGGGAA +
Preference number: 4 (lower is better)
Translates to: NARHNRKVAMPFKCVGPHCSTSS*GQGDRE
Trigger: TTCCCTATCTCCTTGGCCGCAAGAGGAGGTGGAGCA...GTGGGGACCCACACATTTGAAAGGCATGGCCACCTTTCTGTTGTGCCTTGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GGGAATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTGCCCCCTCTGCCGCCTaGTCTTTCCATCTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: GNVSHGSGVQPDLEIYHLAPSAA*SFHLLQ
Trigger: CTGCAAGAGATGGAAAGAGCAGGCGGCAGAGGGGGC...AAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACATTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp AGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAGGGATGCTTCAGCCACCCCAGTaGCATCGGAAGAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: RGNQVPTYPTHSELWTGMLQPPQ*HRKKAQ
Trigger: CTGTGCCTTCTTCCGATGGCACTGGGGTGGCTGAAG...CATCCCTGTCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp AATGCAAGGCACAACAGAAAGGTGGCCATGCCTTTCAAATGTGTGGGTCCCCACCAGGCGTCTCTGTTGTaGGCAGTTCTGCCATTGTCG +
Preference number: 4 (lower is better)
Translates to: NARHNRKVAMPFKCVGPHQASLL*AVLPLS
Trigger: CGACAATGGCAGAACTGCCCACAACAGAGACGCCTG...GTGGGGACCCACACATTTGAAAGGCATGGCCACCTTTCTGTTGTGCCTTGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TGTGGACTAGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGATGTGGGTCAGGTGGCTaGGGTGGCTGCTGTCATAGG +
Preference number: 4 (lower is better)
Translates to: CGLEAIKFQLIPHTQSCGCGSGG*GGCCHR
Trigger: CCTATGACAGCAGCCACCCCAGCCACCTGACCCACA...TCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCTAGTCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGAAGGACGATGCCTGCCTaGGCCGTAATCCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGRTMPA*AVIQGS
Trigger: GCTGCCCTGGATTACGGCCCAGGCAGGCATCGTCCT...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp ATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGGTGAGATCGGAGCCCCCAAGCTCTaGGCCCAGACTCCGGGAGAT +
Preference number: 4 (lower is better)
Translates to: MEVESSQIWKSTIFFGEIGAPKL*AQTPGD
Trigger: ATCTCCCGGAGTCTGGGCCCAGAGCTTGGGGGCTCC...GATCTCACCGAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GGGAATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTGAAGAAGGTGCCATCTaGACCCCGCCAGTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: GNVSHGSGVQPDLEIYHLEEGAI*TPPVRH
Trigger: GTGCCTGACTGGCGGGGTCCAGATGGCACCTTCTTC...AAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TGTGGACTAGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACGCAGGAGCCAATGGTaGCTGAGATGGCCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: CGLEAIKFQLIPHTQSCGRRSQW*LRWPGR
Trigger: CCTACCTGGCCATCTCAGCCACCATTGGCTCCTGCG...TCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCTAGTCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp AATGCAAGGCACAACAGAAAGGTGGCCATGCCTTTCAAATGTGTGGGTCCCCACATCAGTGGGTACAGCTaGTCCTCGCAAAGGCACTGG +
Preference number: 4 (lower is better)
Translates to: NARHNRKVAMPFKCVGPHISGYS*SSQRHW
Trigger: CCAGTGCCTTTGCGAGGACCAGCTGTACCCACTGAT...GTGGGGACCCACACATTTGAAAGGCATGGCCACCTTTCTGTTGTGCCTTGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GCTATTTCTCTAGCCTATAAACACAAGACCCAGGGAATGTGTCCCATGGAAGTGCCTTGGGGTCCACTCTaGCGCTGGCTTCCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: AISLAYKHKTQGMCPMEVPWGPL*RWLPSR
Trigger: ACGGGAAGGAAGCCAGCGCCAGAGTGGACCCCAAGG...CACTTCCATGGGACACATTCCCTGGGTCTTGTGTTTATAGGCTAGAGAAATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262502.5
ENST00000563236.6
CDS-3UTR CCA 90 bp AGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAGGGATGCCGACTGGAAGATGGTaGTGGCCTGCTCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: RGNQVPTYPTHSELWTGMPTGRW*WPAPPS
Trigger: TGAAGGAGGAGCAGGCCACCACCATCTTCCAGTCGG...CATCCCTGTCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGCTCCGACTGGAAGATaGTGGTGGCCTGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALAPTGR*WWPAPP
Trigger: AGGAGGAGCAGGCCACCACCATCTTCCAGTCGGAGC...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GGGAATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTGCCCTGCTCCGACTaGAAGATGGTGGTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GNVSHGSGVQPDLEIYHLLPCSD*KMVVAC
Trigger: GCAGGCCACCACCATCTTCCAGTCGGAGCAGGGCAA...AAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp AGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAGGGATGGTAACCCCAGCACTTTaGGAGACCGAGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: RGNQVPTYPTHSELWTGMVTPAL*ETEVGG
Trigger: TCCACCCACCTCGGTCTCCCAAAGTGCTGGGGTTAC...CATCCCTGTCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GAGCCTGTAGGTCCTACAGGTGAGGCTCCCATTCTCCTATTGGAGGAAGCAGGGGACGGGAGTGAGAAGTaGTTCAAGAAATTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: EPVGPTGEAPILLLEEAGDGSEK*FKKFAW
Trigger: CCAGGCAAATTTCTTGAACCACTTCTCACTCCCGTC...CCCTGCTTCCTCCAATAGGAGAATGGGAGCCTCACCTGTAGGACCTACAGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGATCTGCCATTGTCGCCTaGGTGTCCAGGGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGSAIVA*VSREGP
Trigger: TGGCCCCTCCCTGGACACCCAGGCGACAATGGCAGA...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp AGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAGGGATGGGGCTAGGCTTGGCTTaGACCTGCTCCTGCCTATCT +
Preference number: 4 (lower is better)
Translates to: RGNQVPTYPTHSELWTGMGLGLA*TCSCLS
Trigger: AGATAGGCAGGAGCAGGTCCAAGCCAAGCCTAGCCC...CATCCCTGTCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp GCTATTTCTCTAGCCTATAAACACAAGACCCAGGGAATGTGTCCCATGGAAGTGCCAGACTCCGGGAGATaGGGAAGTAGGTGCCACCTG +
Preference number: 4 (lower is better)
Translates to: AISLAYKHKTQGMCPMEVPDSGR*GSRCHL
Trigger: CAGGTGGCACCTACTTCCTCATCTCCCGGAGTCTGG...CACTTCCATGGGACACATTCCCTGGGTCTTGTGTTTATAGGCTAGAGAAATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGTGGCGAAAGCGAAAATaGGGCCGATGGAGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALWRKRK*GRWSPQ
Trigger: TTGGGGGCTCCATCGGCCTCATTTTCGCTTTCGCCA...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGATGTCCGCCCGGTAGCTaGAGAAGCCTTTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGCPPGS*RSLWRP
Trigger: AGGCCTCCAAAGGCTTCTTCAGCTACCGGGCGGACA...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp GCTATTTCTCTAGCCTATAAACACAAGACCCAGGGAATGTGTCCCATGGAAGTGGCTTGTGGGGTCCGATaGGCACGTGGCCACAGATCA +
Preference number: 4 (lower is better)
Translates to: AISLAYKHKTQGMCPMEVACGVR*ARGHRS
Trigger: TGATCTGTGGCCACGTGCTCATCGGACCCCACAAGC...CACTTCCATGGGACACATTCCCTGGGTCTTGTGTTTATAGGCTAGAGAAATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp CTTTCAAATGTGTGGGTCCCCACCCATGAGTGGATCCCAAAGTCATTTTATTGGGCTTGTGGGGTCCGATaGGCACGTGGCCACAGATCA +
Preference number: 4 (lower is better)
Translates to: LSNVWVPTHEWIPKSFYWACGVR*ARGHRS
Trigger: TGATCTGTGGCCACGTGCTCATCGGACCCCACAAGC...CCAATAAAATGACTTTGGGATCCACTCATGGGTGGGGACCCACACATTTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp AAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTGACCTGCGGCCTGCATaGGGATCTGGACGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: KDPLLKVTGVRSGSRNLPDLRPA*GSGRLC
Trigger: GCAGAGGCGTCCAGATCCTCATGCAGGCCGCAGGTC...AGGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp AGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAGGGATGTCATCTTGGACACGTTaGGTCCCTCCCGCATCCTCA +
Preference number: 4 (lower is better)
Translates to: RGNQVPTYPTHSELWTGMSSWTR*VPPASS
Trigger: TGAGGATGCGGGAGGGACTCAACGTGTCCAAGATGA...CATCCCTGTCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp AATGCAAGGCACAACAGAAAGGTGGCCATGCCTTTCAAATGTGTGGGTCCCCACCGTAATCTCCTCATCTaGGATCTTCCAGGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: NARHNRKVAMPFKCVGPHRNLLI*DLPGAV
Trigger: GACTGCCCCTGGAAGATCTCAGATGAGGAGATTACG...GTGGGGACCCACACATTTGAAAGGCATGGCCACCTTTCTGTTGTGCCTTGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp CACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCTGTAGGTCCTACAGGTaGGGCTCCCATTCTCCTATT +
Preference number: 4 (lower is better)
Translates to: HPGRSVETVKIHAQHWDSCRSYR*GSHSPI
Trigger: AATAGGAGAATGGGAGCCTCACCTGTAGGACCTACA...GGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp AGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAGGGATGCCTGAAGGCCTTCCGTaGGCCAGGTATAGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: RGNQVPTYPTHSELWTGMPEGLP*ARYRSF
Trigger: AAAGGACCTATACCTGGCTCACGGAAGGCCTTCAGG...CATCCCTGTCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp GAGCCTGTAGGTCCTACAGGTGAGGCTCCCATTCTCCTATTGGAGGAAGCAGGGTGCAGTGGGATGACCTaGGAAATGCTAACATCCTTT +
Preference number: 4 (lower is better)
Translates to: EPVGPTGEAPILLLEEAGCSGMT*EMLTSF
Trigger: AAAGGATGTTAGCATTTCTCAGGTCATCCCACTGCA...CCCTGCTTCCTCCAATAGGAGAATGGGAGCCTCACCTGTAGGACCTACAGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CAAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCGGTGGCTGGGGTGGCTaGTGTCATAGGCAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: QRPLIESDGSEKWFKKFAGGWGG*CHRQLV
Trigger: CACCAGCTGCCTATGACAGCAGCCACCCCAGCCACC...GGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGAGTCCCGCACGGTCTCTaGAAAGCCCACCGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGVPHGL*KAHRVH
Trigger: ATGCACACGGTGGGCTTTGCAGAGACCGTGCGGGAC...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp ATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGGTGAGATCGGGGTCCACGATGGGTaGCCCATACTCCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: MEVESSQIWKSTIFFGEIGVHDG*PILLEQ
Trigger: CTGCTCCAGGAGTATGGGGCACCCATCGTGGACCCC...GATCTCACCGAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GCTATTTCTCTAGCCTATAAACACAAGACCCAGGGAATGTGTCCCATGGAAGTGTGGACTCCCACTCCATaGCAGCCAGGGAGATGGCCA +
Preference number: 4 (lower is better)
Translates to: AISLAYKHKTQGMCPMEVWTPTP*QPGRWP
Trigger: TGGCCATCTCCCTGGCTGGCATGGAGTGGGAGTCCA...CACTTCCATGGGACACATTCCCTGGGTCTTGTGTTTATAGGCTAGAGAAATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GGGAATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTAGCTCAGGCATCCTCTaGTTGTGGGGTCCGATGAGC +
Preference number: 4 (lower is better)
Translates to: GNVSHGSGVQPDLEIYHLSSGIL*LWGPMS
Trigger: GCTCATCGGACCCCACAAGCAGAGGATGCCTGAGCT...AAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CTTTCAAATGTGTGGGTCCCCACCCATGAGTGGATCCCAAAGTCATTTTATTGGAAGATGGTGGTGGCCTaGTCCTCCTTCACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LSNVWVPTHEWIPKSFYWKMVVA*SSFTRA
Trigger: GGCCCTGGTGAAGGAGGAGCAGGCCACCACCATCTT...CCAATAAAATGACTTTGGGATCCACTCATGGGTGGGGACCCACACATTTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp AGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAGGGATGCACGGATCTTGCATTTaGTCCACCTCCTCTTGCGGC +
Preference number: 4 (lower is better)
Translates to: RGNQVPTYPTHSELWTGMHGSCI*STSSCG
Trigger: GCCGCAAGAGGAGGTGGAGCAAATGCAAGATCCGTG...CATCCCTGTCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp AATGCAAGGCACAACAGAAAGGTGGCCATGCCTTTCAAATGTGTGGGTCCCCACTCGTTTCCGTGTGTGTaGGCTGCAAGTCTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: NARHNRKVAMPFKCVGPHSFPCV*AASLSV
Trigger: CACACTGAGACTTGCAGCGCACACACACGGAAACGA...GTGGGGACCCACACATTTGAAAGGCATGGCCACCTTTCTGTTGTGCCTTGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp AATGCAAGGCACAACAGAAAGGTGGCCATGCCTTTCAAATGTGTGGGTCCCCACGTTCCTTGCCAACCTTaGCATCTCTACACCCCTCTC +
Preference number: 4 (lower is better)
Translates to: NARHNRKVAMPFKCVGPHVPCQP*HLYTPL
Trigger: GAGAGGGGTGTAGAGATGGCAAGGTTGGCAAGGAAC...GTGGGGACCCACACATTTGAAAGGCATGGCCACCTTTCTGTTGTGCCTTGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGAGCCCCCTCTGCCGCCTaGTCTTTCCATCTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGAPSAA*SFHLLQ
Trigger: CTGCAAGAGATGGAAAGAGCAGGCGGCAGAGGGGGC...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCAATTTGCATACAAATTTAACAGCCCCTCCCTaGCAGCCCCCTCTGCCGCCT +
Preference number: 4 (lower is better)
Translates to: VETVKIHAQHWDSNLHTNLTAPP*QPPLPP
Trigger: AGGCGGCAGAGGGGGCTGGCAGGGAGGGGCTGTTAA...ATTTGTATGCAAATTGGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp AGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAGGGATGCAGGCGTCTCTGTTGTaGGCAGTTCTGCCATTGTCG +
Preference number: 4 (lower is better)
Translates to: RGNQVPTYPTHSELWTGMQASLL*AVLPLS
Trigger: CGACAATGGCAGAACTGCCCACAACAGAGACGCCTG...CATCCCTGTCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TGTGGACTAGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACCATCAGTCATCTCGTaGCTGGGCCGGCTGTCAAAG +
Preference number: 4 (lower is better)
Translates to: CGLEAIKFQLIPHTQSCGPSVIS*LGRLSK
Trigger: CTTTGACAGCCGGCCCAGCCACGAGATGACTGATGG...TCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCTAGTCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp ATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGGTGAGATCAGGACGATGCCTGCCTaGGCCGTAATCCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: MEVESSQIWKSTIFFGEIRTMPA*AVIQGS
Trigger: GCTGCCCTGGATTACGGCCCAGGCAGGCATCGTCCT...GATCTCACCGAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp ATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGGTGAGATCAGCCCACCGTGTGCATaGCCACACCCACGGCATTGG +
Preference number: 4 (lower is better)
Translates to: MEVESSQIWKSTIFFGEISPPCA*PHPRHW
Trigger: CCAATGCCGTGGGTGTGGCCATGCACACGGTGGGCT...GATCTCACCGAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TTATTTCGAGTTAAGAATTATCCCAGAATCCAGCTCAATGGCTGGGAGGCAGGCACAGCACCTGGGCCTTaGACTCCCACTCCATGCCAG +
Preference number: 4 (lower is better)
Translates to: LFRVKNYPRIQLNGWEAGTAPGP*TPTPCQ
Trigger: CTGGCATGGAGTGGGAGTCCAAGGCCCAGGTGCTGT...GCCTGCCTCCCAGCCATTGAGCTGGATTCTGGGATAATTCTTAACTCGAAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGAGGAAGAACAGCACCTaGGCCTTGGACTCCCACTCC +
Preference number: 4 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALRKNST*ALDSHS
Trigger: GGAGTGGGAGTCCAAGGCCCAGGTGCTGTTCTTCCT...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp ATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGGTGAGATCGGCCTTGTCCTCAGATaGGGGGATCAGCGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: MEVESSQIWKSTIFFGEIGLVLR*GDQRPH
Trigger: GTGGGGACGCTGATCCCCCCATCTGAGGACAAGGCC...GATCTCACCGAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GGGAATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTGGTCACCAGATATGTTaGCCCCTGCCAGGATGCCTG +
Preference number: 4 (lower is better)
Translates to: GNVSHGSGVQPDLEIYHLGHQIC*PLPGCL
Trigger: CAGGCATCCTGGCAGGGGCCAACATATCTGGTGACC...AAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CTTTCAAATGTGTGGGTCCCCACCCATGAGTGGATCCCAAAGTCATTTTATTGGTGTAGTCTTCCACTGTaGCCGGGTGAGCCGACTGCC +
Preference number: 4 (lower is better)
Translates to: LSNVWVPTHEWIPKSFYWCSLPL*PGEPTA
Trigger: GGCAGTCGGCTCACCCGGCCACAGTGGAAGACTACA...CCAATAAAATGACTTTGGGATCCACTCATGGGTGGGGACCCACACATTTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GCTATTTCTCTAGCCTATAAACACAAGACCCAGGGAATGTGTCCCATGGAAGTGTGTAGTCTTCCACTGTaGCCGGGTGAGCCGACTGCC +
Preference number: 4 (lower is better)
Translates to: AISLAYKHKTQGMCPMEVCSLPL*PGEPTA
Trigger: GGCAGTCGGCTCACCCGGCCACAGTGGAAGACTACA...CACTTCCATGGGACACATTCCCTGGGTCTTGTGTTTATAGGCTAGAGAAATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TGTGGACTAGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACCGACTGGAAGATGGTaGTGGCCTGCTCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: CGLEAIKFQLIPHTQSCGPTGRW*WPAPPS
Trigger: TGAAGGAGGAGCAGGCCACCACCATCTTCCAGTCGG...TCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCTAGTCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CTTTCAAATGTGTGGGTCCCCACCCATGAGTGGATCCCAAAGTCATTTTATTGGGCTCCGACTGGAAGATaGTGGTGGCCTGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LSNVWVPTHEWIPKSFYWAPTGR*WWPAPP
Trigger: AGGAGGAGCAGGCCACCACCATCTTCCAGTCGGAGC...CCAATAAAATGACTTTGGGATCCACTCATGGGTGGGGACCCACACATTTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CTTTCAAATGTGTGGGTCCCCACCCATGAGTGGATCCCAAAGTCATTTTATTGGCCATGTACAGCGAGCTaGGGCACTTCCCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LSNVWVPTHEWIPKSFYWPCTAS*GTSPSS
Trigger: GGAGGAAGGGGAAGTGCCCCAGCTCGCTGTACATGG...CCAATAAAATGACTTTGGGATCCACTCATGGGTGGGGACCCACACATTTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp ATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGGTGAGATCGGAGGTCTGAGGTCCTaGGACAGGGTCTCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: MEVESSQIWKSTIFFGEIGGLRS*DRVSSQ
Trigger: CTGGCTGGAGACCCTGTCCCAGGACCTCAGACCTCC...GATCTCACCGAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp AGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAGGGATGTCGGATCAGGATGACTaGAGGTCTGAGGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: RGNQVPTYPTHSELWTGMSDQDD*RSEVLG
Trigger: TCCCAGGACCTCAGACCTCCAGTCATCCTGATCCGA...CATCCCTGTCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GAGCCTGTAGGTCCTACAGGTGAGGCTCCCATTCTCCTATTGGAGGAAGCAGGGATATATGTATTTGCCTaGCTGTGGAGGCTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: EPVGPTGEAPILLLEEAGIYVFA*LWRLRE
Trigger: CTCTCTGAGCCTCCACAGCCAGGCAAATACATATAT...CCCTGCTTCCTCCAATAGGAGAATGGGAGCCTCACCTGTAGGACCTACAGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGTAACCCCAGCACTTTaGGAGACCGAGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALVTPAL*ETEVGG
Trigger: TCCACCCACCTCGGTCTCCCAAAGTGCTGGGGTTAC...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp ATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCTCTGCCATTGTCGCCTaGGTGTCCAGGGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: MCPMEVESSQIWKSTIFFSAIVA*VSREGP
Trigger: TGGCCCCTCCCTGGACACCCAGGCGACAATGGCAGA...GAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCCAGACTCCCTGTGTGTaGACAAATGCAAGGCACAAC +
Preference number: 4 (lower is better)
Translates to: HPGRSVETVKIHAQHWDSQTPCV*TNARHN
Trigger: GTTGTGCCTTGCATTTGTCCACACACAGGGAGTCTG...GGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGAATCCAGCTCAATGGCTaGGAGGCAGGCCCATCCTCC +
Preference number: 4 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGIQLNG*EAGPSS
Trigger: GGAGGATGGGCCTGCCTCCCAGCCATTGAGCTGGAT...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp CAAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTGTCCGCCCGGTAGCTaGAGAAGCCTTTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: QRPLIESDGSEKWFKKFACPPGS*RSLWRP
Trigger: AGGCCTCCAAAGGCTTCTTCAGCTACCGGGCGGACA...GGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp ATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGGTGAGATCGCTGGGTGCACTCGGTaGAGTTCCAGCCATAGCTGC +
Preference number: 4 (lower is better)
Translates to: MEVESSQIWKSTIFFGEIAGCTR*SSSHSC
Trigger: GCAGCTATGGCTGGAACTTCACCGAGTGCACCCAGC...GATCTCACCGAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp TCTACCATCTTTTTCGGTGAGATCATCAGATGCTGCCACTTAAAGTGCAACAGACAGGGGCGCGAAGCCTaGCACCATGCTCATGGTCTG +
Preference number: 4 (lower is better)
Translates to: STIFFGEIIRCCHLKCNRQGREA*HHAHGL
Trigger: CAGACCATGAGCATGGTGTCAGGCTTCGCGCCCCTG...TCTGTTGCACTTTAAGTGGCAGCATCTGATGATCTCACCGAAAAAGATGGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp AATGCAAGGCACAACAGAAAGGTGGCCATGCCTTTCAAATGTGTGGGTCCCCACGTTGTAGTATTGGAATaGAGGTCTCCACCCAGGCGA +
Preference number: 4 (lower is better)
Translates to: NARHNRKVAMPFKCVGPHVVVLE*RSPPRR
Trigger: TCGCCTGGGTGGAGACCTTCATTCCAATACTACAAC...GTGGGGACCCACACATTTGAAAGGCATGGCCACCTTTCTGTTGTGCCTTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp CTTTCAAATGTGTGGGTCCCCACCCATGAGTGGATCCCAAAGTCATTTTATTGGCCCGAGGGTTCTGGTTaGTGTCAGGGAGGATGTGGA +
Preference number: 4 (lower is better)
Translates to: LSNVWVPTHEWIPKSFYWPEGSG*CQGGCG
Trigger: TCCACATCCTCCCTGACATCAACCAGAACCCTCGGG...CCAATAAAATGACTTTGGGATCCACTCATGGGTGGGGACCCACACATTTGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp AGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAGGGATGCGTAATCTCCTCATCTaGGATCTTCCAGGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: RGNQVPTYPTHSELWTGMRNLLI*DLPGAV
Trigger: GACTGCCCCTGGAAGATCTCAGATGAGGAGATTACG...CATCCCTGTCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp AGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAGGGATGGACAGAAGAAATGCTTaGACCCGGGAGGAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: RGNQVPTYPTHSELWTGMDRRNA*TREEVA
Trigger: TGCAACCTCCTCCCGGGTTCAAGCATTTCTTCTGTC...CATCCCTGTCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp TTATTTCGAGTTAAGAATTATCCCAGAATCCAGCTCAATGGCTGGGAGGCAGGCGTCTGCCTTCCTGCTTaGGGAAGGAGTGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: LFRVKNYPRIQLNGWEAGVCLPA*GRSAGQ
Trigger: CTGACCTGCACTCCTTCCTCAAGCAGGAAGGCAGAC...GCCTGCCTCCCAGCCATTGAGCTGGATTCTGGGATAATTCTTAACTCGAAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GGGAATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTGTTGTGGGCAGTTCTaGCATTGTCGCCTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: GNVSHGSGVQPDLEIYHLCCGQF*HCRLGV
Trigger: GACACCCAGGCGACAATGGCAGAACTGCCCACAACA...AAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACATTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CAAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTGCGCATGCAGAAGGTaGTGCTGTGGGTCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: QRPLIESDGSEKWFKKFACACRR*CCGSGG
Trigger: GCCACCTGACCCACAGCAGCACCTTCTGCATGCGCA...GGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGAAGCCAAAGGTGCGCATaGAGAAGGTGCTGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGSQRCA*RRCCCG
Trigger: CCCACAGCAGCACCTTCTGCATGCGCACCTTTGGCT...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GGGAATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTGCTCACCAGGCTGGGTaGTGTTGGCATAGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: GNVSHGSGVQPDLEIYHLAHQAG*CWHSAH
Trigger: ATGAGCACTATGCCAACAGCACCCAGCCTGGTGAGC...AAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACATTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GAAAAGTCCCTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGGTCAGGACGATGCCTaGCTGGGCCGTAATCCAGGG +
Preference number: 4 (lower is better)
Translates to: EKSLVQRTSEDIKDPLLKGQDDA*LGRNPG
Trigger: CCCTGGATTACGGCCCAGGCAGGCATCGTCCTGACC...TTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAGGGACTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCAATTTGCATACAAATGCAAAGCCCACCGTGTaGATGGCCACACCCACGGCA +
Preference number: 4 (lower is better)
Translates to: VETVKIHAQHWDSNLHTNAKPTV*MATPTA
Trigger: TGCCGTGGGTGTGGCCATGCACACGGTGGGCTTTGC...ATTTGTATGCAAATTGGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CAAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCGTCCCGCACGGTCTCTaGAAAGCCCACCGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: QRPLIESDGSEKWFKKFAVPHGL*KAHRVH
Trigger: ATGCACACGGTGGGCTTTGCAGAGACCGTGCGGGAC...GGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGACATTCCGAAGAAGGTaGCATCTGGACCCCGCCAGT +
Preference number: 4 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALTFRRR*HLDPAS
Trigger: ACTGGCGGGGTCCAGATGGCACCTTCTTCGGAATGT...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp TGTGGACTAGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGAACATTCCGAAGAAGGTaGCATCTGGACCCCGCCAGT +
Preference number: 4 (lower is better)
Translates to: CGLEAIKFQLIPHTQSCGTFRRR*HLDPAS
Trigger: ACTGGCGGGGTCCAGATGGCACCTTCTTCGGAATGT...TCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCTAGTCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CGCCCAGCATTGGGACTCCAATTTGCATACAAATCAAAGACTGAACTCTTAATTTGGCCCCTGCCAGGATaGCTGTGGCCGAGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: RPALGLQFAYKSKTELLIWPLPG*LWPRGR
Trigger: TCTTCCCCTCGGCCACAGGCATCCTGGCAGGGGCCA...AATTAAGAGTTCAGTCTTTGATTTGTATGCAAATTGGAGTCCCAATGCTGGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGAAGCTCAGGCATCCTCTaGTTGTGGGGTCCGATGAGC +
Preference number: 4 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGSSGIL*LWGPMS
Trigger: GCTCATCGGACCCCACAAGCAGAGGATGCCTGAGCT...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CTTTCAAATGTGTGGGTCCCCACCCATGAGTGGATCCCAAAGTCATTTTATTGGTTCAGCCACTTGGTGTaGCCGTTGGCGATGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LSNVWVPTHEWIPKSFYWFSHLV*PLAMSW
Trigger: CCAGCTCATCGCCAACGGGCACACCAAGTGGCTGAA...CCAATAAAATGACTTTGGGATCCACTCATGGGTGGGGACCCACACATTTGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CTTTCAAATGTGTGGGTCCCCACCCATGAGTGGATCCCAAAGTCATTTTATTGGCATTCTCCCGAGACCTaGGGCCTGCATGAGGATCTG +
Preference number: 4 (lower is better)
Translates to: LSNVWVPTHEWIPKSFYWHSPET*GLHEDL
Trigger: CAGATCCTCATGCAGGCCGCAGGTCTCGGGAGAATG...CCAATAAAATGACTTTGGGATCCACTCATGGGTGGGGACCCACACATTTGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp AATGCAAGGCACAACAGAAAGGTGGCCATGCCTTTCAAATGTGTGGGTCCCCACCTGAGACAGAAGAAATaGTTGAACCCGGGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: NARHNRKVAMPFKCVGPHLRQKK*LNPGGG
Trigger: ACCTCCTCCCGGGTTCAAGCATTTCTTCTGTCTCAG...GTGGGGACCCACACATTTGAAAGGCATGGCCACCTTTCTGTTGTGCCTTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp AAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTCCTGCCAGCCCCCTCTaGCGCCTGCTCTTTCCATCT +
Preference number: 4 (lower is better)
Translates to: KDPLLKVTGVRSGSRNLPPASPL*RLLFPS
Trigger: AGATGGAAAGAGCAGGCGGCAGAGGGGGCTGGCAGG...AGGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CTTTCAAATGTGTGGGTCCCCACCCATGAGTGGATCCCAAAGTCATTTTATTGGCGATGGCAGTGCTCTTaGACCCTAGCTTTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: LSNVWVPTHEWIPKSFYWRWQCS*TLALGA
Trigger: AGCCCCCAAAGCTAGGGTGCAAGAGCACTGCCATCG...CCAATAAAATGACTTTGGGATCCACTCATGGGTGGGGACCCACACATTTGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CGCCCAGCATTGGGACTCCAATTTGCATACAAATCAAAGACTGAACTCTTAATTGCCCGCTGCACAAAGTaGCGTCCCCAGGCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: RPALGLQFAYKSKTELLIARCTK*RPQASL
Trigger: CAGAGACGCCTGGGGACGCCACTTTGTGCAGCGGGC...AATTAAGAGTTCAGTCTTTGATTTGTATGCAAATTGGAGTCCCAATGCTGGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TGTGGACTAGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGAGTCATAGGCAGCTGGTaGAGAGGGCTCATCACTGCT +
Preference number: 4 (lower is better)
Translates to: CGLEAIKFQLIPHTQSCGVIGSW*RGLITA
Trigger: AGCAGTGATGAGCCCTCTCCACCAGCTGCCTATGAC...TCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCTAGTCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGCTGTCATAGGCAGCTaGTGGAGAGGGCTCATCACT +
Preference number: 4 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALAVIGS*WRGLIT
Trigger: AGTGATGAGCCCTCTCCACCAGCTGCCTATGACAGC...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCCATAGTGCTCATATGTaGGCACCACATCGATCGTGT +
Preference number: 4 (lower is better)
Translates to: HPGRSVETVKIHAQHWDSHSAHM*APHRSC
Trigger: ACACGATCGATGTGGTGCCCACATATGAGCACTATG...GGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp ATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCCAGTCATCTCGTGGCTaGGCCGGCTGTCAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: MCPMEVESSQIWKSTIFFQSSRG*AGCQRP
Trigger: TGGCCTTTGACAGCCGGCCCAGCCACGAGATGACTG...GAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CTTTCAAATGTGTGGGTCCCCACCCATGAGTGGATCCCAAAGTCATTTTATTGGCCATCAGTCATCTCGTaGCTGGGCCGGCTGTCAAAG +
Preference number: 4 (lower is better)
Translates to: LSNVWVPTHEWIPKSFYWPSVIS*LGRLSK
Trigger: CTTTGACAGCCGGCCCAGCCACGAGATGACTGATGG...CCAATAAAATGACTTTGGGATCCACTCATGGGTGGGGACCCACACATTTGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCAATTTGCATACAAATCCAGCCGAAGCGCACTaGCTCCTCGGGGTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: VETVKIHAQHWDSNLHTNPAEAH*LLGVLL
Trigger: GAGAAGAACCCCGAGGAGCCAGTGCGCTTCGGCTGG...ATTTGTATGCAAATTGGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCAATTTGCATACAAATAGCCCACCGTGTGCATaGCCACACCCACGGCATTGG +
Preference number: 4 (lower is better)
Translates to: VETVKIHAQHWDSNLHTNSPPCA*PHPRHW
Trigger: CCAATGCCGTGGGTGTGGCCATGCACACGGTGGGCT...ATTTGTATGCAAATTGGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CAAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCACAGCACCTGGGCCTTaGACTCCCACTCCATGCCAG +
Preference number: 4 (lower is better)
Translates to: QRPLIESDGSEKWFKKFATAPGP*TPTPCQ
Trigger: CTGGCATGGAGTGGGAGTCCAAGGCCCAGGTGCTGT...GGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GAAAAGTCCCTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGGCCTTGTCCTCAGATaGGGGGATCAGCGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: EKSLVQRTSEDIKDPLLKGLVLR*GDQRPH
Trigger: GTGGGGACGCTGATCCCCCCATCTGAGGACAAGGCC...TTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAGGGACTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CAAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCGAAGAAGGTGCCATCTaGACCCCGCCAGTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: QRPLIESDGSEKWFKKFAEEGAI*TPPVRH
Trigger: GTGCCTGACTGGCGGGGTCCAGATGGCACCTTCTTC...GGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CTTTCAAATGTGTGGGTCCCCACCCATGAGTGGATCCCAAAGTCATTTTATTGGTGGCAGCTGTGCTGCTaGGTGCACTCGGTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: LSNVWVPTHEWIPKSFYWWQLCC*VHSVKF
Trigger: GAACTTCACCGAGTGCACCCAGCAGCACAGCTGCCA...CCAATAAAATGACTTTGGGATCCACTCATGGGTGGGGACCCACACATTTGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TGTGGACTAGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGAGAAGAAGCCGATCAGTaGGTACAGCTGGTCCTCGCA +
Preference number: 4 (lower is better)
Translates to: CGLEAIKFQLIPHTQSCGEEADQ*VQLVLA
Trigger: TGCGAGGACCAGCTGTACCCACTGATCGGCTTCTTC...TCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCTAGTCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TCTACCATCTTTTTCGGTGAGATCATCAGATGCTGCCACTTAAAGTGCAACAGAGCCTGCATGAGGATCTaGACGCCTCTGCGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: STIFFGEIIRCCHLKCNRACMRI*TPLRRS
Trigger: GGACCTCCGCAGAGGCGTCCAGATCCTCATGCAGGC...TCTGTTGCACTTTAAGTGGCAGCATCTGATGATCTCACCGAAAAAGATGGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp ATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGGTGAGATCTGTAGTCTTCCACTGTaGCCGGGTGAGCCGACTGCC +
Preference number: 4 (lower is better)
Translates to: MEVESSQIWKSTIFFGEICSLPL*PGEPTA
Trigger: GGCAGTCGGCTCACCCGGCCACAGTGGAAGACTACA...GATCTCACCGAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGCTTCCCGTCCTCCGCTaGGTCAAACACGGGGTTAAT +
Preference number: 4 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALLPVLR*VKHGVN
Trigger: ATTAACCCCGTGTTTGACCCAGCGGAGGACGGGAAG...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp AGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAGGGATGGCCAGTAGATGTCTATaGTCTTCTTGCCCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: RGNQVPTYPTHSELWTGMASRCL*SSCPAP
Trigger: CGGAGCAGGGCAAGAAGACCATAGACATCTACTGGC...CATCCCTGTCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TGTGGACTAGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGATCAGCCCGAGGGTTCTaGTTGATGTCAGGGAGGATG +
Preference number: 4 (lower is better)
Translates to: CGLEAIKFQLIPHTQSCGSARGF*LMSGRM
Trigger: CATCCTCCCTGACATCAACCAGAACCCTCGGGCTGA...TCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCTAGTCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGTGTCCTCAAACCTCTTaGTGTGCTCAGCCCGAGGGT +
Preference number: 4 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALCPQTS*CAQPEG
Trigger: ACCCTCGGGCTGAGCACACCAAGAGGTTTGAGGACA...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GGGAATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTGTCCTCAAACCTCTTaGTGTGCTCAGCCCGAGGGT +
Preference number: 4 (lower is better)
Translates to: GNVSHGSGVQPDLEIYHLCPQTS*CAQPEG
Trigger: ACCCTCGGGCTGAGCACACCAAGAGGTTTGAGGACA...AAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACATTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp ATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCCCATGTACAGCGAGCTaGGGCACTTCCCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: MCPMEVESSQIWKSTIFFPCTAS*GTSPSS
Trigger: GGAGGAAGGGGAAGTGCCCCAGCTCGCTGTACATGG...GAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TCTACCATCTTTTTCGGTGAGATCATCAGATGCTGCCACTTAAAGTGCAACAGAGGAGGTCTGAGGTCCTaGGACAGGGTCTCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: STIFFGEIIRCCHLKCNRGGLRS*DRVSSQ
Trigger: CTGGCTGGAGACCCTGTCCCAGGACCTCAGACCTCC...TCTGTTGCACTTTAAGTGGCAGCATCTGATGATCTCACCGAAAAAGATGGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGACCCTCTCCTTTCACCTaGTCTTGGGCTAGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGPSPFT*SWARLG
Trigger: GCCAAGCCTAGCCCAAGACCAGGTGAAAGGAGAGGG...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGACTTGGCCTCACCCACTaGCATTCGATGGCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGLGLTH*HSMAVL
Trigger: GAGCACTGCCATCGAATGCCAGTGGGTGAGGCCAAG...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCAATTTGCATACAAATGGCTTCAGAGCAGCCTaGGAGCCCCAAGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: VETVKIHAQHWDSNLHTNGFRAA*EPQAFW
Trigger: CCAGAAGGCTTGGGGCTCCCAGGCTGCTCTGAAGCC...ATTTGTATGCAAATTGGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp TCTACCATCTTTTTCGGTGAGATCATCAGATGCTGCCACTTAAAGTGCAACAGAGAATCATCACCCCCTTaGCCCAGCCGAAGCGCACTG +
Preference number: 4 (lower is better)
Translates to: STIFFGEIIRCCHLKCNRESSPP*PSRSAL
Trigger: CAGTGCGCTTCGGCTGGGTCAAGGGGGTGATGATTC...TCTGTTGCACTTTAAGTGGCAGCATCTGATGATCTCACCGAAAAAGATGGTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp TTATTTCGAGTTAAGAATTATCCCAGAATCCAGCTCAATGGCTGGGAGGCAGGCAGGTGCCACCTGACTTaGCCTTGCCATTGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: LFRVKNYPRIQLNGWEAGRCHLT*PCHWWR
Trigger: TCTCCACCAATGGCAAGGTCAAGTCAGGTGGCACCT...GCCTGCCTCCCAGCCATTGAGCTGGATTCTGGGATAATTCTTAACTCGAAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp ATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCTGGCGAAAGCGAAAATaGGGCCGATGGAGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: MCPMEVESSQIWKSTIFFWRKRK*GRWSPQ
Trigger: TTGGGGGCTCCATCGGCCTCATTTTCGCTTTCGCCA...GAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp CAAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTGGCGAAAGCGAAAATaGGGCCGATGGAGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: QRPLIESDGSEKWFKKFAWRKRK*GRWSPQ
Trigger: TTGGGGGCTCCATCGGCCTCATTTTCGCTTTCGCCA...GGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp TTATTTCGAGTTAAGAATTATCCCAGAATCCAGCTCAATGGCTGGGAGGCAGGCGGGGGCGGTAGTTCTTaGTGTGGTCTTCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: LFRVKNYPRIQLNGWEAGGGGSS*CGLPPH
Trigger: ATGAGGTGGAAGACCACATCAAGAACTACCGCCCCC...GCCTGCCTCCCAGCCATTGAGCTGGATTCTGGGATAATTCTTAACTCGAAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp CCTTTAAAAGGAATAGGATGCTTTAGAGAGTTTTCCTTGCAGCTCCATCTGCTATGTGCCCGTTGGCGATaGGCTGGAGCTCAGGCATCC +
Preference number: 4 (lower is better)
Translates to: PLKGIGCFREFSLQLHLLCARWR*AGAQAS
Trigger: GGATGCCTGAGCTCCAGCTCATCGCCAACGGGCACA...TAGCAGATGGAGCTGCAAGGAAAACTCTCTAAAGCATCCTATTCCTTTTAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp ATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGGTGAGATCGGAGGTCCTCGGCAATaGCATCCGAGTAGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: MEVESSQIWKSTIFFGEIGGPRQ*HPSRRP
Trigger: AGGCCTTCTACTCGGATGTCATTGCCGAGGACCTCC...GATCTCACCGAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp AATGCAAGGCACAACAGAAAGGTGGCCATGCCTTTCAAATGTGTGGGTCCCCACACTGCCAGTTCTTCTTaGACCCAACCACCAGAATGT +
Preference number: 4 (lower is better)
Translates to: NARHNRKVAMPFKCVGPHTASSS*TQPPEC
Trigger: ACATTCTGGTGGTTGGGTTCAAGAAGAACTGGCAGT...GTGGGGACCCACACATTTGAAAGGCATGGCCACCTTTCTGTTGTGCCTTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp GCTATTTCTCTAGCCTATAAACACAAGACCCAGGGAATGTGTCCCATGGAAGTGGTGGGTCCCCACCCATaGGTGGATCCCAAAGTCATT +
Preference number: 4 (lower is better)
Translates to: AISLAYKHKTQGMCPMEVVGPHP*VDPKVI
Trigger: AATGACTTTGGGATCCACTCATGGGTGGGGACCCAC...CACTTCCATGGGACACATTCCCTGGGTCTTGTGTTTATAGGCTAGAGAAATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp AGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAGGGATGAAGGCCAGCATTCCCTaGTGGATGCTTCCCCTTATT +
Preference number: 4 (lower is better)
Translates to: RGNQVPTYPTHSELWTGMKASIP*WMLPLI
Trigger: AATAAGGGGAAGCATCCATCAGGGAATGCTGGCCTT...CATCCCTGTCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGATGTTGTGGGCAGTTCTaGCATTGTCGCCTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGCCGQF*HCRLGV
Trigger: GACACCCAGGCGACAATGGCAGAACTGCCCACAACA...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCAATTTGCATACAAATTGCGCATGCAGAAGGTaGTGCTGTGGGTCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: VETVKIHAQHWDSNLHTNCACRR*CCGSGG
Trigger: GCCACCTGACCCACAGCAGCACCTTCTGCATGCGCA...ATTTGTATGCAAATTGGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGTGTTGTAGCCAAAGGTaGGCATGCAGAAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALCCSQR*ACRRCC
Trigger: GCAGCACCTTCTGCATGCGCACCTTTGGCTACAACA...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CCTTTAAAAGGAATAGGATGCTTTAGAGAGTTTTCCTTGCAGCTCCATCTGCTAGGTCAGGACGATGCCTaGCTGGGCCGTAATCCAGGG +
Preference number: 4 (lower is better)
Translates to: PLKGIGCFREFSLQLHLLGQDDA*LGRNPG
Trigger: CCCTGGATTACGGCCCAGGCAGGCATCGTCCTGACC...TAGCAGATGGAGCTGCAAGGAAAACTCTCTAAAGCATCCTATTCCTTTTAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCAATTTGCATACAAATGTCCCGCACGGTCTCTaGAAAGCCCACCGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: VETVKIHAQHWDSNLHTNVPHGL*KAHRVH
Trigger: ATGCACACGGTGGGCTTTGCAGAGACCGTGCGGGAC...ATTTGTATGCAAATTGGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CGCCCAGCATTGGGACTCCAATTTGCATACAAATCAAAGACTGAACTCTTAATTGGGGTCCACGATGGGTaGCCCATACTCCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: RPALGLQFAYKSKTELLIGVHDG*PILLEQ
Trigger: CTGCTCCAGGAGTATGGGGCACCCATCGTGGACCCC...AATTAAGAGTTCAGTCTTTGATTTGTATGCAAATTGGAGTCCCAATGCTGGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCAATTTGCATACAAATTGGACTCCCACTCCATaGCAGCCAGGGAGATGGCCA +
Preference number: 4 (lower is better)
Translates to: VETVKIHAQHWDSNLHTNWTPTP*QPGRWP
Trigger: TGGCCATCTCCCTGGCTGGCATGGAGTGGGAGTCCA...ATTTGTATGCAAATTGGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CGCCCAGCATTGGGACTCCAATTTGCATACAAATCAAAGACTGAACTCTTAATTAGTTCCAGCCATAGCTaGAGGCCAGCCCCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: RPALGLQFAYKSKTELLISSSHS*RPAPRR
Trigger: CCTGCGAGGGGCTGGCCTGCAGCTATGGCTGGAACT...AATTAAGAGTTCAGTCTTTGATTTGTATGCAAATTGGAGTCCCAATGCTGGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp AGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAGGGATGGGGTTAATGTGCGCCTaGATCATCTTGGACACGTTG +
Preference number: 4 (lower is better)
Translates to: RGNQVPTYPTHSELWTGMGLMCA*IILDTL
Trigger: CAACGTGTCCAAGATGATGCAGGCGCACATTAACCC...CATCCCTGTCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp TGTGGACTAGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGAATGGTCTTCTTGCCCTaGTCCGACTGGAAGATGGTG +
Preference number: 4 (lower is better)
Translates to: CGLEAIKFQLIPHTQSCGMVFLP*SDWKMV
Trigger: CACCATCTTCCAGTCGGAGCAGGGCAAGAAGACCAT...TCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCTAGTCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CTTTCAAATGTGTGGGTCCCCACCCATGAGTGGATCCCAAAGTCATTTTATTGGTGCTCCACCTCCTCTTaGGGCCAAGGAGATAGGGAA +
Preference number: 4 (lower is better)
Translates to: LSNVWVPTHEWIPKSFYWCSTSS*GQGDRE
Trigger: TTCCCTATCTCCTTGGCCGCAAGAGGAGGTGGAGCA...CCAATAAAATGACTTTGGGATCCACTCATGGGTGGGGACCCACACATTTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGTCATTCAGCCTCACCTaGCGAAGGGACTTGACTCTG +
Preference number: 4 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALSFSLT*RRDLTL
Trigger: CAGAGTCAAGTCCCTTCGGCAGGTGAGGCTGAATGA...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GAGCCTGTAGGTCCTACAGGTGAGGCTCCCATTCTCCTATTGGAGGAAGCAGGGATATATATATGTATTTaGCTGGCTGTGGAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: EPVGPTGEAPILLLEEAGIYICI*LAVEAQ
Trigger: CTGAGCCTCCACAGCCAGGCAAATACATATATATAT...CCCTGCTTCCTCCAATAGGAGAATGGGAGCCTCACCTGTAGGACCTACAGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GGGAATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTCGTTTCCGTGTGTGTaGGCTGCAAGTCTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: GNVSHGSGVQPDLEIYHLSFPCV*AASLSV
Trigger: CACACTGAGACTTGCAGCGCACACACACGGAAACGA...AAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CAAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTCAAAGGCCAGGGCATaGAGGTGTCTGCCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: QRPLIESDGSEKWFKKFASKARA*RCLPSC
Trigger: GCAGGAAGGCAGACACCTGCATGCCCTGGCCTTTGA...GGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp ATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGGTGAGATCTCAAAGGCCAGGGCATaGAGGTGTCTGCCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: MEVESSQIWKSTIFFGEISKARA*RCLPSC
Trigger: GCAGGAAGGCAGACACCTGCATGCCCTGGCCTTTGA...GATCTCACCGAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGTTCCTTGCCAACCTTaGCATCTCTACACCCCTCTC +
Preference number: 4 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALVPCQP*HLYTPL
Trigger: GAGAGGGGTGTAGAGATGGCAAGGTTGGCAAGGAAC...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp TTATTTCGAGTTAAGAATTATCCCAGAATCCAGCTCAATGGCTGGGAGGCAGGCGGCTTGGCTTGGACCTaGTCCTGCCTATCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: LFRVKNYPRIQLNGWEAGGLAWT*SCLSVP
Trigger: AGGAACAGATAGGCAGGAGCAGGTCCAAGCCAAGCC...GCCTGCCTCCCAGCCATTGAGCTGGATTCTGGGATAATTCTTAACTCGAAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp TGTGGACTAGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACTAAAGTGTAGGCACTaGAGCAGTCTTGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: CGLEAIKFQLIPHTQSCGLKCRH*SSLGGG
Trigger: GCCTCCTCCAAGACTGCTGCAGTGCCTACACTTTAG...TCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCTAGTCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGAGTCATAGGCAGCTGGTaGAGAGGGCTCATCACTGCT +
Preference number: 4 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGVIGSW*RGLITA
Trigger: AGCAGTGATGAGCCCTCTCCACCAGCTGCCTATGAC...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCAATTTGCATACAAATTGTGGGTCAGGTGGCTaGGGTGGCTGCTGTCATAGG +
Preference number: 4 (lower is better)
Translates to: VETVKIHAQHWDSNLHTNCGSGG*GGCCHR
Trigger: CCTATGACAGCAGCCACCCCAGCCACCTGACCCACA...ATTTGTATGCAAATTGGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CTTTCAAATGTGTGGGTCCCCACCCATGAGTGGATCCCAAAGTCATTTTATTGGTGCCATTGGTGGAGATaGCTGAGATGGAGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LSNVWVPTHEWIPKSFYWCHWWR*LRWRGL
Trigger: CAGGCCTCTCCATCTCAGCCATCTCCACCAATGGCA...CCAATAAAATGACTTTGGGATCCACTCATGGGTGGGGACCCACACATTTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp ATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGGTGAGATCAGGAAGAACAGCACCTaGGCCTTGGACTCCCACTCC +
Preference number: 4 (lower is better)
Translates to: MEVESSQIWKSTIFFGEIRKNST*ALDSHS
Trigger: GGAGTGGGAGTCCAAGGCCCAGGTGCTGTTCTTCCT...GATCTCACCGAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGCAATGGTGGCTGAGATaGCCAGGTAGGAAATGGTCG +
Preference number: 4 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALQWWLR*PGRKWS
Trigger: CGACCATTTCCTACCTGGCCATCTCAGCCACCATTG...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGTCCTCGCAAAGGCACTaGAAGACTTTGGCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALSSQRH*KTLAAE
Trigger: CTCTGCTGCCAAAGTCTTCCAGTGCCTTTGCGAGGA...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GCTATTTCTCTAGCCTATAAACACAAGACCCAGGGAATGTGTCCCATGGAAGTGATCAGTGGGTACAGCTaGTCCTCGCAAAGGCACTGG +
Preference number: 4 (lower is better)
Translates to: AISLAYKHKTQGMCPMEVISGYS*SSQRHW
Trigger: CCAGTGCCTTTGCGAGGACCAGCTGTACCCACTGAT...CACTTCCATGGGACACATTCCCTGGGTCTTGTGTTTATAGGCTAGAGAAATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp ATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGGTGAGATCGGTCCGATGAGCACGTaGCCACAGATCATCAGGCTG +
Preference number: 4 (lower is better)
Translates to: MEVESSQIWKSTIFFGEIGPMST*PQIIRL
Trigger: CAGCCTGATGATCTGTGGCCACGTGCTCATCGGACC...GATCTCACCGAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TCTACCATCTTTTTCGGTGAGATCATCAGATGCTGCCACTTAAAGTGCAACAGAGGCATCCTCTGCTTGTaGGGTCCGATGAGCACGTGG +
Preference number: 4 (lower is better)
Translates to: STIFFGEIIRCCHLKCNRGILCL*GPMSTW
Trigger: CCACGTGCTCATCGGACCCCACAAGCAGAGGATGCC...TCTGTTGCACTTTAAGTGGCAGCATCTGATGATCTCACCGAAAAAGATGGTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCAATTTGCATACAAATGGCATCCTCTGCTTGTaGGGTCCGATGAGCACGTGG +
Preference number: 4 (lower is better)
Translates to: VETVKIHAQHWDSNLHTNGILCL*GPMSTW
Trigger: CCACGTGCTCATCGGACCCCACAAGCAGAGGATGCC...ATTTGTATGCAAATTGGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCAATTTGCATACAAATCCGTTGGCGATGAGCTaGAGCTCAGGCATCCTCTGC +
Preference number: 4 (lower is better)
Translates to: VETVKIHAQHWDSNLHTNPLAMS*SSGILC
Trigger: GCAGAGGATGCCTGAGCTCCAGCTCATCGCCAACGG...ATTTGTATGCAAATTGGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CTTTCAAATGTGTGGGTCCCCACCCATGAGTGGATCCCAAAGTCATTTTATTGGCTTCCCGTCCTCCGCTaGGTCAAACACGGGGTTAAT +
Preference number: 4 (lower is better)
Translates to: LSNVWVPTHEWIPKSFYWLPVLR*VKHGVN
Trigger: ATTAACCCCGTGTTTGACCCAGCGGAGGACGGGAAG...CCAATAAAATGACTTTGGGATCCACTCATGGGTGGGGACCCACACATTTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGAACTGGAAGATGGTGGTaGCCTGCTCCTCCTTCACCA +
Preference number: 4 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGTGRWW*PAPPSP
Trigger: TGGTGAAGGAGGAGCAGGCCACCACCATCTTCCAGT...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GAAAAGTCCCTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAATTGCCCTGCTCCGACTaGAAGATGGTGGTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: EKSLVQRTSEDIKDPLLKLPCSD*KMVVAC
Trigger: GCAGGCCACCACCATCTTCCAGTCGGAGCAGGGCAA...TTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAGGGACTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TTATTTCGAGTTAAGAATTATCCCAGAATCCAGCTCAATGGCTGGGAGGCAGGCTCAGCCCGAGGGTTCTaGTTGATGTCAGGGAGGATG +
Preference number: 4 (lower is better)
Translates to: LFRVKNYPRIQLNGWEAGSARGF*LMSGRM
Trigger: CATCCTCCCTGACATCAACCAGAACCCTCGGGCTGA...GCCTGCCTCCCAGCCATTGAGCTGGATTCTGGGATAATTCTTAACTCGAAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGATCGGATCAGGATGACTaGAGGTCTGAGGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGSDQDD*RSEVLG
Trigger: TCCCAGGACCTCAGACCTCCAGTCATCCTGATCCGA...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp AGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAGGGATGTGTGTCCCATGGAAGTaGAGTCCAGCCAGATTTGGA +
Preference number: 4 (lower is better)
Translates to: RGNQVPTYPTHSELWTGMCVPWK*SPARFG
Trigger: TCCAAATCTGGCTGGACTCCACTTCCATGGGACACA...CATCCCTGTCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCATTCACGCCCAGCATTaGGACTCCAATTTGCATACA +
Preference number: 4 (lower is better)
Translates to: HPGRSVETVKIHAQHWDSIHAQH*DSNLHT
Trigger: TGTATGCAAATTGGAGTCCCAATGCTGGGCGTGAAT...GGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GCTATTTCTCTAGCCTATAAACACAAGACCCAGGGAATGTGTCCCATGGAAGTGCCTTTCACCTGGTCTTaGGCTAGGCTTGGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: AISLAYKHKTQGMCPMEVPFTWS*ARLGLD
Trigger: GTCCAAGCCAAGCCTAGCCCAAGACCAGGTGAAAGG...CACTTCCATGGGACACATTCCCTGGGTCTTGTGTTTATAGGCTAGAGAAATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CCTTTAAAAGGAATAGGATGCTTTAGAGAGTTTTCCTTGCAGCTCCATCTGCTAGAGGCGGTCAGACAGTaGGGCTTCAGAGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PLKGIGCFREFSLQLHLLEAVRQ*GFRAAW
Trigger: CCAGGCTGCTCTGAAGCCCCACTGTCTGACCGCCTC...TAGCAGATGGAGCTGCAAGGAAAACTCTCTAAAGCATCCTATTCCTTTTAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp AAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTGGTGTCTGCCTTCCTTaGGGAAGGAGTGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: KDPLLKVTGVRSGSRNLPGVCLP*GRSAGQ
Trigger: CTGACCTGCACTCCTTCCTCAAGGAAGGCAGACACC...AGGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262502.5
CDS-3UTR TCA 90 bp CGCCCAGCATTGGGACTCCAATTTGCATACAAATCAAAGACTGAACTCTTAATTGAATCATCACCCCCTTaGCCCAGCCGAAGCGCACTG +
Preference number: 4 (lower is better)
Translates to: RPALGLQFAYKSKTELLIESSPP*PSRSAL
Trigger: CAGTGCGCTTCGGCTGGGTCAAGGGGGTGATGATTC...AATTAAGAGTTCAGTCTTTGATTTGTATGCAAATTGGAGTCCCAATGCTGGGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp GCTATTTCTCTAGCCTATAAACACAAGACCCAGGGAATGTGTCCCATGGAAGTGGAAGTAGGTGCCACCTaGCTTGACCTTGCCATTGGT +
Preference number: 4 (lower is better)
Translates to: AISLAYKHKTQGMCPMEVEVGAT*LDLAIG
Trigger: ACCAATGGCAAGGTCAAGTCAGGTGGCACCTACTTC...CACTTCCATGGGACACATTCCCTGGGTCTTGTGTTTATAGGCTAGAGAAATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp CCTTTAAAAGGAATAGGATGCTTTAGAGAGTTTTCCTTGCAGCTCCATCTGCTATGTCCGCCCGGTAGCTaGAGAAGCCTTTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: PLKGIGCFREFSLQLHLLCPPGS*RSLWRP
Trigger: AGGCCTCCAAAGGCTTCTTCAGCTACCGGGCGGACA...TAGCAGATGGAGCTGCAAGGAAAACTCTCTAAAGCATCCTATTCCTTTTAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGTTGTAGTATTGGAATaGAGGTCTCCACCCAGGCGA +
Preference number: 4 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALVVVLE*RSPPRR
Trigger: TCGCCTGGGTGGAGACCTTCATTCCAATACTACAAC...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp ATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGGGGGCGGTAGTTCTTaGTGTGGTCTTCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: MCPMEVESSQIWKSTIFFGGGSS*CGLPPH
Trigger: ATGAGGTGGAAGACCACATCAAGAACTACCGCCCCC...GAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp GAAAAGTCCCTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAACCCGAGGGTTCTGGTTaGTGTCAGGGAGGATGTGGA +
Preference number: 4 (lower is better)
Translates to: EKSLVQRTSEDIKDPLLKPEGSG*CQGGCG
Trigger: TCCACATCCTCCCTGACATCAACCAGAACCCTCGGG...TTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAGGGACTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp GCTATTTCTCTAGCCTATAAACACAAGACCCAGGGAATGTGTCCCATGGAAGTGCAGTGGCCTCATCCTTaGAGCCATCATTCAGACGGA +
Preference number: 4 (lower is better)
Translates to: AISLAYKHKTQGMCPMEVQWPHP*SHHSDG
Trigger: TCCGTCTGAATGATGGCTTCAAGGATGAGGCCACTG...CACTTCCATGGGACACATTCCCTGGGTCTTGTGTTTATAGGCTAGAGAAATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp AGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAGGGATGACTGGCAGTAAAAGGTaGGCACGTTTTCCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: RGNQVPTYPTHSELWTGMTGSKR*ARFPGF
Trigger: GAAACCAGGAAAACGTGCTCACCTTTTACTGCCAGT...CATCCCTGTCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp CTTTCAAATGTGTGGGTCCCCACCCATGAGTGGATCCCAAAGTCATTTTATTGGGACAGAAGAAATGCTTaGACCCGGGAGGAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: LSNVWVPTHEWIPKSFYWDRRNA*TREEVA
Trigger: TGCAACCTCCTCCCGGGTTCAAGCATTTCTTCTGTC...CCAATAAAATGACTTTGGGATCCACTCATGGGTGGGGACCCACACATTTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp GTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCAATTTGCATACAAATGTCTGCCTTCCTGCTTaGGGAAGGAGTGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: VETVKIHAQHWDSNLHTNVCLPA*GRSAGQ
Trigger: CTGACCTGCACTCCTTCCTCAAGCAGGAAGGCAGAC...ATTTGTATGCAAATTGGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp TGTGGACTAGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGATGCTTTTCTTCCCGGTaGGATGAGCTGGGAAAATGG +
Preference number: 4 (lower is better)
Translates to: CGLEAIKFQLIPHTQSCGCFSSR*DELGKW
Trigger: CCATTTTCCCAGCTCATCTCACCGGGAAGAAAAGCA...TCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCTAGTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp AATGCAAGGCACAACAGAAAGGTGGCCATGCCTTTCAAATGTGTGGGTCCCCACTGCAGTGGGATGACCTaGGAAATGCTAACATCCTTT +
Preference number: 4 (lower is better)
Translates to: NARHNRKVAMPFKCVGPHCSGMT*EMLTSF
Trigger: AAAGGATGTTAGCATTTCTCAGGTCATCCCACTGCA...GTGGGGACCCACACATTTGAAAGGCATGGCCACCTTTCTGTTGTGCCTTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GCTATTTCTCTAGCCTATAAACACAAGACCCAGGGAATGTGTCCCATGGAAGTGTGTTGTAGCCAAAGGTaGGCATGCAGAAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: AISLAYKHKTQGMCPMEVCCSQR*ACRRCC
Trigger: GCAGCACCTTCTGCATGCGCACCTTTGGCTACAACA...CACTTCCATGGGACACATTCCCTGGGTCTTGTGTTTATAGGCTAGAGAAATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp ATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGGTGAGATCGCTCACCAGGCTGGGTaGTGTTGGCATAGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: MEVESSQIWKSTIFFGEIAHQAG*CWHSAH
Trigger: ATGAGCACTATGCCAACAGCACCCAGCCTGGTGAGC...GATCTCACCGAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp ATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGGTGAGATCTCAAAGGCCAGGGCATaGAGGTGTCTGCCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: MEVESSQIWKSTIFFGEISKARA*RCLPSL
Trigger: CAAGGAAGGCAGACACCTGCATGCCCTGGCCTTTGA...GATCTCACCGAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262502.5
CDS-3UTR GCA 90 bp CCTTTAAAAGGAATAGGATGCTTTAGAGAGTTTTCCTTGCAGCTCCATCTGCTATGGACTCCCACTCCATaGCAGCCAGGGAGATGGCCA +
Preference number: 4 (lower is better)
Translates to: PLKGIGCFREFSLQLHLLWTPTP*QPGRWP
Trigger: TGGCCATCTCCCTGGCTGGCATGGAGTGGGAGTCCA...TAGCAGATGGAGCTGCAAGGAAAACTCTCTAAAGCATCCTATTCCTTTTAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp AAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTAGATATGTTGGCCCCTaGCAGGATGCCTGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: KDPLLKVTGVRSGSRNLPRYVGP*QDACGR
Trigger: TCGGCCACAGGCATCCTGGCAGGGGCCAACATATCT...AGGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCAATTTGCATACAAATAGATATGTTGGCCCCTaGCAGGATGCCTGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: VETVKIHAQHWDSNLHTNRYVGP*QDACGR
Trigger: TCGGCCACAGGCATCCTGGCAGGGGCCAACATATCT...ATTTGTATGCAAATTGGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGTCTTGCCATAGCCTTTaGCGAAGAAGCCGATCAGTG +
Preference number: 4 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALSCHSL*RRSRSV
Trigger: CACTGATCGGCTTCTTCGGCAAAGGCTATGGCAAGA...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp TCTACCATCTTTTTCGGTGAGATCATCAGATGCTGCCACTTAAAGTGCAACAGACATTCTCCCGAGACCTaGGGCCTGCATGAGGATCTG +
Preference number: 4 (lower is better)
Translates to: STIFFGEIIRCCHLKCNRHSPET*GLHEDL
Trigger: CAGATCCTCATGCAGGCCGCAGGTCTCGGGAGAATG...TCTGTTGCACTTTAAGTGGCAGCATCTGATGATCTCACCGAAAAAGATGGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp AGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAGGGATGAGGCATCATGGAGGATaGCAATGTAGTCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: RGNQVPTYPTHSELWTGMRHHGG*QCSLPL
Trigger: CAGTGGAAGACTACATTGGCATCCTCCATGATGCCT...CATCCCTGTCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGAATGGTCTTCTTGCCCTaGTCCGACTGGAAGATGGTG +
Preference number: 4 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGMVFLP*SDWKMV
Trigger: CACCATCTTCCAGTCGGAGCAGGGCAAGAAGACCAT...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp TTATTTCGAGTTAAGAATTATCCCAGAATCCAGCTCAATGGCTGGGAGGCAGGCATGGTCTTCTTGCCCTaGTCCGACTGGAAGATGGTG +
Preference number: 4 (lower is better)
Translates to: LFRVKNYPRIQLNGWEAGMVFLP*SDWKMV
Trigger: CACCATCTTCCAGTCGGAGCAGGGCAAGAAGACCAT...GCCTGCCTCCCAGCCATTGAGCTGGATTCTGGGATAATTCTTAACTCGAAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp TGTGGACTAGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGATGTCTATGGTCTTCTTaGCCTGCTCCGACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: CGLEAIKFQLIPHTQSCGCLWSS*PAPTGR
Trigger: TCTTCCAGTCGGAGCAGGGCAAGAAGACCATAGACA...TCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCTAGTCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp ATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGGTGAGATCTGCTCCACCTCCTCTTaGGGCCAAGGAGATAGGGAA +
Preference number: 4 (lower is better)
Translates to: MEVESSQIWKSTIFFGEICSTSS*GQGDRE
Trigger: TTCCCTATCTCCTTGGCCGCAAGAGGAGGTGGAGCA...GATCTCACCGAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp TGTGGACTAGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACGAACACACGGATCTTaGATTTGCTCCACCTCCTCT +
Preference number: 4 (lower is better)
Translates to: CGLEAIKFQLIPHTQSCGRTHGS*ICSTSS
Trigger: AGAGGAGGTGGAGCAAATGCAAGATCCGTGTGTTCG...TCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCTAGTCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp AATGCAAGGCACAACAGAAAGGTGGCCATGCCTTTCAAATGTGTGGGTCCCCACATTCAGACGGAAGGGTaGAATCATGTCCTCAAACCT +
Preference number: 4 (lower is better)
Translates to: NARHNRKVAMPFKCVGPHIQTEG*NHVLKP
Trigger: AGGTTTGAGGACATGATTGCACCCTTCCGTCTGAAT...GTGGGGACCCACACATTTGAAAGGCATGGCCACCTTTCTGTTGTGCCTTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGATCATTCAGCCTCACCTaGCGAAGGGACTTGACTCTG +
Preference number: 4 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGSFSLT*RRDLTL
Trigger: CAGAGTCAAGTCCCTTCGGCAGGTGAGGCTGAATGA...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGCTGAGACAGAAGAAATaGTTGAACCCGGGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALLRQKK*LNPGGG
Trigger: ACCTCCTCCCGGGTTCAAGCATTTCTTCTGTCTCAG...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp AATGCAAGGCACAACAGAAAGGTGGCCATGCCTTTCAAATGTGTGGGTCCCCACCTGTGTGTGGACAAATaGAAGGCACAACAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: NARHNRKVAMPFKCVGPHLCVDK*KAQQKG
Trigger: ACCTTTCTGTTGTGCCTTGCATTTGTCCACACACAG...GTGGGGACCCACACATTTGAAAGGCATGGCCACCTTTCTGTTGTGCCTTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGAGCTTGGACCTGCTCCTaGCTATCTGTTCCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGAWTCS*LSVPCQ
Trigger: TTGGCAAGGAACAGATAGGCAGGAGCAGGTCCAAGC...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp ATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGGTGAGATCGGCTTGGCTTGGACCTaGTCCTGCCTATCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: MEVESSQIWKSTIFFGEIGLAWT*SCLSVP
Trigger: AGGAACAGATAGGCAGGAGCAGGTCCAAGCCAAGCC...GATCTCACCGAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GCTATTTCTCTAGCCTATAAACACAAGACCCAGGGAATGTGTCCCATGGAAGTGGGCATTCGATGGCAGTaGTCTTGCACCCTAGCTTTG +
Preference number: 4 (lower is better)
Translates to: AISLAYKHKTQGMCPMEVGIRWQ*SCTLAL
Trigger: CAAAGCTAGGGTGCAAGAGCACTGCCATCGAATGCC...CACTTCCATGGGACACATTCCCTGGGTCTTGTGTTTATAGGCTAGAGAAATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCAATTTGCATACAAATCTTCAGCCACCCCAGTaGCATCGGAAGAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: VETVKIHAQHWDSNLHTNLQPPQ*HRKKAQ
Trigger: CTGTGCCTTCTTCCGATGGCACTGGGGTGGCTGAAG...ATTTGTATGCAAATTGGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp TTATTTCGAGTTAAGAATTATCCCAGAATCCAGCTCAATGGCTGGGAGGCAGGCCTAAAGTGTAGGCACTaGAGCAGTCTTGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LFRVKNYPRIQLNGWEAGLKCRH*SSLGGG
Trigger: GCCTCCTCCAAGACTGCTGCAGTGCCTACACTTTAG...GCCTGCCTCCCAGCCATTGAGCTGGATTCTGGGATAATTCTTAACTCGAAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp AATGCAAGGCACAACAGAAAGGTGGCCATGCCTTTCAAATGTGTGGGTCCCCACGCATTCCCTGATGGATaGTTCCCCTTATTTCGAGTT +
Preference number: 4 (lower is better)
Translates to: NARHNRKVAMPFKCVGPHAFPDG*FPLFRV
Trigger: AACTCGAAATAAGGGGAAGCATCCATCAGGGAATGC...GTGGGGACCCACACATTTGAAAGGCATGGCCACCTTTCTGTTGTGCCTTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CCTTTAAAAGGAATAGGATGCTTTAGAGAGTTTTCCTTGCAGCTCCATCTGCTATGTGGGTCAGGTGGCTaGGGTGGCTGCTGTCATAGG +
Preference number: 4 (lower is better)
Translates to: PLKGIGCFREFSLQLHLLCGSGG*GGCCHR
Trigger: CCTATGACAGCAGCCACCCCAGCCACCTGACCCACA...TAGCAGATGGAGCTGCAAGGAAAACTCTCTAAAGCATCCTATTCCTTTTAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGACAGGCTGGGTGCTGTTaGCATAGTGCTCATATGTGG +
Preference number: 4 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGQAGCC*HSAHMW
Trigger: CCACATATGAGCACTATGCCAACAGCACCCAGCCTG...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CGCCCAGCATTGGGACTCCAATTTGCATACAAATCAAAGACTGAACTCTTAATTCAGTCATCTCGTGGCTaGGCCGGCTGTCAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: RPALGLQFAYKSKTELLIQSSRG*AGCQRP
Trigger: TGGCCTTTGACAGCCGGCCCAGCCACGAGATGACTG...AATTAAGAGTTCAGTCTTTGATTTGTATGCAAATTGGAGTCCCAATGCTGGGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp AAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTCCATCAGTCATCTCGTaGCTGGGCCGGCTGTCAAAG +
Preference number: 4 (lower is better)
Translates to: KDPLLKVTGVRSGSRNLPPSVIS*LGRLSK
Trigger: CTTTGACAGCCGGCCCAGCCACGAGATGACTGATGG...AGGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CAAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTGCCATTGGTGGAGATaGCTGAGATGGAGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: QRPLIESDGSEKWFKKFACHWWR*LRWRGL
Trigger: CAGGCCTCTCCATCTCAGCCATCTCCACCAATGGCA...GGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CGCCCAGCATTGGGACTCCAATTTGCATACAAATCAAAGACTGAACTCTTAATTACAGCACCTGGGCCTTaGACTCCCACTCCATGCCAG +
Preference number: 4 (lower is better)
Translates to: RPALGLQFAYKSKTELLITAPGP*TPTPCQ
Trigger: CTGGCATGGAGTGGGAGTCCAAGGCCCAGGTGCTGT...AATTAAGAGTTCAGTCTTTGATTTGTATGCAAATTGGAGTCCCAATGCTGGGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TCTACCATCTTTTTCGGTGAGATCATCAGATGCTGCCACTTAAAGTGCAACAGAAGGAAGAACAGCACCTaGGCCTTGGACTCCCACTCC +
Preference number: 4 (lower is better)
Translates to: STIFFGEIIRCCHLKCNRRKNST*ALDSHS
Trigger: GGAGTGGGAGTCCAAGGCCCAGGTGCTGTTCTTCCT...TCTGTTGCACTTTAAGTGGCAGCATCTGATGATCTCACCGAAAAAGATGGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TTATTTCGAGTTAAGAATTATCCCAGAATCCAGCTCAATGGCTGGGAGGCAGGCTCAGGCACCAAGTTCTaGACAAAAATGTCCGCCCGG +
Preference number: 4 (lower is better)
Translates to: LFRVKNYPRIQLNGWEAGSGTKF*TKMSAR
Trigger: CCGGGCGGACATTTTTGTCCAGAACTTGGTGCCTGA...GCCTGCCTCCCAGCCATTGAGCTGGATTCTGGGATAATTCTTAACTCGAAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TCTACCATCTTTTTCGGTGAGATCATCAGATGCTGCCACTTAAAGTGCAACAGAGGTCACCAGATATGTTaGCCCCTGCCAGGATGCCTG +
Preference number: 4 (lower is better)
Translates to: STIFFGEIIRCCHLKCNRGHQIC*PLPGCL
Trigger: CAGGCATCCTGGCAGGGGCCAACATATCTGGTGACC...TCTGTTGCACTTTAAGTGGCAGCATCTGATGATCTCACCGAAAAAGATGGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGTGGCCAGGTAGGAAATaGTCGTCCAGAAAATGGCCA +
Preference number: 4 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALWPGRK*SSRKWP
Trigger: TGGCCATTTTCTGGACGACCATTTCCTACCTGGCCA...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp AAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTTGGCAGCTGTGCTGCTaGGTGCACTCGGTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: KDPLLKVTGVRSGSRNLPWQLCC*VHSVKF
Trigger: GAACTTCACCGAGTGCACCCAGCAGCACAGCTGCCA...AGGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CAAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCATCAGTGGGTACAGCTaGTCCTCGCAAAGGCACTGG +
Preference number: 4 (lower is better)
Translates to: QRPLIESDGSEKWFKKFAISGYS*SSQRHW
Trigger: CCAGTGCCTTTGCGAGGACCAGCTGTACCCACTGAT...GGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCAATTTGCATACAAATGGTCCGATGAGCACGTaGCCACAGATCATCAGGCTG +
Preference number: 4 (lower is better)
Translates to: VETVKIHAQHWDSNLHTNGPMST*PQIIRL
Trigger: CAGCCTGATGATCTGTGGCCACGTGCTCATCGGACC...ATTTGTATGCAAATTGGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp ATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGGTGAGATCACTGGAAGATGGTGGTaGCCTGCTCCTCCTTCACCA +
Preference number: 4 (lower is better)
Translates to: MEVESSQIWKSTIFFGEITGRWW*PAPPSP
Trigger: TGGTGAAGGAGGAGCAGGCCACCACCATCTTCCAGT...GATCTCACCGAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CTTTCAAATGTGTGGGTCCCCACCCATGAGTGGATCCCAAAGTCATTTTATTGGGCCAGTAGATGTCTATaGTCTTCTTGCCCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: LSNVWVPTHEWIPKSFYWASRCL*SSCPAP
Trigger: CGGAGCAGGGCAAGAAGACCATAGACATCTACTGGC...CCAATAAAATGACTTTGGGATCCACTCATGGGTGGGGACCCACACATTTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GCTATTTCTCTAGCCTATAAACACAAGACCCAGGGAATGTGTCCCATGGAAGTGTCCATCCTGTTAATCTaGCCGCCTACGAACACACGG +
Preference number: 4 (lower is better)
Translates to: AISLAYKHKTQGMCPMEVSILLI*PPTNTR
Trigger: CCGTGTGTTCGTAGGCGGCCAGATTAACAGGATGGA...CACTTCCATGGGACACATTCCCTGGGTCTTGTGTTTATAGGCTAGAGAAATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp AGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAGGGATGATCGCCTTTCTCTCCTaGTCCATCCTGTTAATCTGG +
Preference number: 4 (lower is better)
Translates to: RGNQVPTYPTHSELWTGMIAFLS*SILLIW
Trigger: CCAGATTAACAGGATGGACCAGGAGAGAAAGGCGAT...CATCCCTGTCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GGGAATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTCAGACTCCCTGTGTGTaGACAAATGCAAGGCACAAC +
Preference number: 4 (lower is better)
Translates to: GNVSHGSGVQPDLEIYHLQTPCV*TNARHN
Trigger: GTTGTGCCTTGCATTTGTCCACACACAGGGAGTCTG...AAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACATTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GAAAAGTCCCTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAACCCTCTCCTTTCACCTaGTCTTGGGCTAGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: EKSLVQRTSEDIKDPLLKPSPFT*SWARLG
Trigger: GCCAAGCCTAGCCCAAGACCAGGTGAAAGGAGAGGG...TTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAGGGACTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GAAAAGTCCCTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAACTTGGCCTCACCCACTaGCATTCGATGGCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: EKSLVQRTSEDIKDPLLKLGLTH*HSMAVL
Trigger: GAGCACTGCCATCGAATGCCAGTGGGTGAGGCCAAG...TTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAGGGACTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp AAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTGAGCCCCAAGCCTTCTaGGCTTTGCAGTGGGATGAC +
Preference number: 4 (lower is better)
Translates to: KDPLLKVTGVRSGSRNLPEPQAF*ALQWDD
Trigger: GTCATCCCACTGCAAAGCCCAGAAGGCTTGGGGCTC...AGGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GAAAAGTCCCTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGAGCCCCAAGCCTTCTaGGCTTTGCAGTGGGATGAC +
Preference number: 4 (lower is better)
Translates to: EKSLVQRTSEDIKDPLLKEPQAF*ALQWDD
Trigger: GTCATCCCACTGCAAAGCCCAGAAGGCTTGGGGCTC...TTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAGGGACTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp AAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTAGGTGCCACCTGACTTaGCCTTGCCATTGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: KDPLLKVTGVRSGSRNLPRCHLT*PCHWWR
Trigger: TCTCCACCAATGGCAAGGTCAAGTCAGGTGGCACCT...AGGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp ATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGAAGTAGGTGCCACCTaGCTTGACCTTGCCATTGGT +
Preference number: 4 (lower is better)
Translates to: MCPMEVESSQIWKSTIFFEVGAT*LDLAIG
Trigger: ACCAATGGCAAGGTCAAGTCAGGTGGCACCTACTTC...GAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp CCTTTAAAAGGAATAGGATGCTTTAGAGAGTTTTCCTTGCAGCTCCATCTGCTAGGAGGTCCTCGGCAATaGCATCCGAGTAGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: PLKGIGCFREFSLQLHLLGGPRQ*HPSRRP
Trigger: AGGCCTTCTACTCGGATGTCATTGCCGAGGACCTCC...TAGCAGATGGAGCTGCAAGGAAAACTCTCTAAAGCATCCTATTCCTTTTAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp AGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAGGGATGCACACACGCCATAGTTaGAATCAAAGGCATCATGGA +
Preference number: 4 (lower is better)
Translates to: RGNQVPTYPTHSELWTGMHTRHS*NQRHHG
Trigger: TCCATGATGCCTTTGATTTCAACTATGGCGTGTGTG...CATCCCTGTCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp GTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCAATTTGCATACAAATTCATCTTGGACACGTTaGGTCCCTCCCGCATCCTCA +
Preference number: 4 (lower is better)
Translates to: VETVKIHAQHWDSNLHTNSSWTR*VPPASS
Trigger: TGAGGATGCGGGAGGGACTCAACGTGTCCAAGATGA...ATTTGTATGCAAATTGGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp CGCCCAGCATTGGGACTCCAATTTGCATACAAATCAAAGACTGAACTCTTAATTCCCGAGGGTTCTGGTTaGTGTCAGGGAGGATGTGGA +
Preference number: 4 (lower is better)
Translates to: RPALGLQFAYKSKTELLIPEGSG*CQGGCG
Trigger: TCCACATCCTCCCTGACATCAACCAGAACCCTCGGG...AATTAAGAGTTCAGTCTTTGATTTGTATGCAAATTGGAGTCCCAATGCTGGGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp CAAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCCAGTGGCCTCATCCTTaGAGCCATCATTCAGACGGA +
Preference number: 4 (lower is better)
Translates to: QRPLIESDGSEKWFKKFAQWPHP*SHHSDG
Trigger: TCCGTCTGAATGATGGCTTCAAGGATGAGGCCACTG...GGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp TTATTTCGAGTTAAGAATTATCCCAGAATCCAGCTCAATGGCTGGGAGGCAGGCTGTAGGTCCTACAGGTaGGGCTCCCATTCTCCTATT +
Preference number: 4 (lower is better)
Translates to: LFRVKNYPRIQLNGWEAGCRSYR*GSHSPI
Trigger: AATAGGAGAATGGGAGCCTCACCTGTAGGACCTACA...GCCTGCCTCCCAGCCATTGAGCTGGATTCTGGGATAATTCTTAACTCGAAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp GAAAAGTCCCTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGGGTCCCCACCCATaGGTGGATCCCAAAGTCATT +
Preference number: 4 (lower is better)
Translates to: EKSLVQRTSEDIKDPLLKVGPHP*VDPKVI
Trigger: AATGACTTTGGGATCCACTCATGGGTGGGGACCCAC...TTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAGGGACTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp CCTTTAAAAGGAATAGGATGCTTTAGAGAGTTTTCCTTGCAGCTCCATCTGCTACAACGTGTAGTGACCTaGAGGCCTTCCGTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PLKGIGCFREFSLQLHLLQRVVT*RPSVSQ
Trigger: CTGGCTCACGGAAGGCCTTCAGGTCACTACACGTTG...TAGCAGATGGAGCTGCAAGGAAAACTCTCTAAAGCATCCTATTCCTTTTAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CGCCCAGCATTGGGACTCCAATTTGCATACAAATCAAAGACTGAACTCTTAATTAGCCAAAGGTGCGCATaGAGAAGGTGCTGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: RPALGLQFAYKSKTELLISQRCA*RRCCCG
Trigger: CCCACAGCAGCACCTTCTGCATGCGCACCTTTGGCT...AATTAAGAGTTCAGTCTTTGATTTGTATGCAAATTGGAGTCCCAATGCTGGGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp TCTTTGAGGTTTGAAGAACCAGAAAATTGTTTTCTACGTGGCTCTAGAAAGGCCAGATATGTTGGCCCCTaGCAGGATGCCTGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: SLRFEEPENCFLRGSRKARYVGP*QDACGR
Trigger: TCGGCCACAGGCATCCTGGCAGGGGCCAACATATCT...GGCCTTTCTAGAGCCACGTAGAAAACAATTTTCTGGTTCTTCAAACCTCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CAAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCCGGGCTCCTTGTTCTTaGCATAGCCTTTGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: QRPLIESDGSEKWFKKFARAPCS*HSLCRR
Trigger: TCTTCGGCAAAGGCTATGGCAAGAACAAGGAGCCCG...GGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp TTATTTCGAGTTAAGAATTATCCCAGAATCCAGCTCAATGGCTGGGAGGCAGGCGGGTTAATGTGCGCCTaGATCATCTTGGACACGTTG +
Preference number: 4 (lower is better)
Translates to: LFRVKNYPRIQLNGWEAGGLMCA*IILDTL
Trigger: CAACGTGTCCAAGATGATGCAGGCGCACATTAACCC...GCCTGCCTCCCAGCCATTGAGCTGGATTCTGGGATAATTCTTAACTCGAAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGATGTCTATGGTCTTCTTaGCCTGCTCCGACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGCLWSS*PAPTGR
Trigger: TCTTCCAGTCGGAGCAGGGCAAGAAGACCATAGACA...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp AGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAGGGATGATTCAGACGGAAGGGTaGAATCATGTCCTCAAACCT +
Preference number: 4 (lower is better)
Translates to: RGNQVPTYPTHSELWTGMIQTEG*NHVLKP
Trigger: AGGTTTGAGGACATGATTGCACCCTTCCGTCTGAAT...CATCCCTGTCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCATATATATATGTATTTaGCTGGCTGTGGAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: HPGRSVETVKIHAQHWDSIYICI*LAVEAQ
Trigger: CTGAGCCTCCACAGCCAGGCAAATACATATATATAT...GGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CAAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCGCTTGGACCTGCTCCTaGCTATCTGTTCCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: QRPLIESDGSEKWFKKFAAWTCS*LSVPCQ
Trigger: TTGGCAAGGAACAGATAGGCAGGAGCAGGTCCAAGC...GGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CGCCCAGCATTGGGACTCCAATTTGCATACAAATCAAAGACTGAACTCTTAATTGCTCTTTCCATCTCTTaGAGGTGGCTCCTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: RPALGLQFAYKSKTELLIALSIS*RWLLLP
Trigger: GGGGAGGAGGAGCCACCTGCAAGAGATGGAAAGAGC...AATTAAGAGTTCAGTCTTTGATTTGTATGCAAATTGGAGTCCCAATGCTGGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp AAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTCAGGCGTCTCTGTTGTaGGCAGTTCTGCCATTGTCG +
Preference number: 4 (lower is better)
Translates to: KDPLLKVTGVRSGSRNLPQASLL*AVLPLS
Trigger: CGACAATGGCAGAACTGCCCACAACAGAGACGCCTG...AGGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TCTACCATCTTTTTCGGTGAGATCATCAGATGCTGCCACTTAAAGTGCAACAGAGTCATAGGCAGCTGGTaGAGAGGGCTCATCACTGCT +
Preference number: 4 (lower is better)
Translates to: STIFFGEIIRCCHLKCNRVIGSW*RGLITA
Trigger: AGCAGTGATGAGCCCTCTCCACCAGCTGCCTATGAC...TCTGTTGCACTTTAAGTGGCAGCATCTGATGATCTCACCGAAAAAGATGGTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TCTACCATCTTTTTCGGTGAGATCATCAGATGCTGCCACTTAAAGTGCAACAGAGCTGTCATAGGCAGCTaGTGGAGAGGGCTCATCACT +
Preference number: 4 (lower is better)
Translates to: STIFFGEIIRCCHLKCNRAVIGS*WRGLIT
Trigger: AGTGATGAGCCCTCTCCACCAGCTGCCTATGACAGC...TCTGTTGCACTTTAAGTGGCAGCATCTGATGATCTCACCGAAAAAGATGGTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CCTTTAAAAGGAATAGGATGCTTTAGAGAGTTTTCCTTGCAGCTCCATCTGCTAGGTCACCAGATATGTTaGCCCCTGCCAGGATGCCTG +
Preference number: 4 (lower is better)
Translates to: PLKGIGCFREFSLQLHLLGHQIC*PLPGCL
Trigger: CAGGCATCCTGGCAGGGGCCAACATATCTGGTGACC...TAGCAGATGGAGCTGCAAGGAAAACTCTCTAAAGCATCCTATTCCTTTTAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TCTTTGAGGTTTGAAGAACCAGAAAATTGTTTTCTACGTGGCTCTAGAAAGGCCTGGCAGCTGTGCTGCTaGGTGCACTCGGTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: SLRFEEPENCFLRGSRKAWQLCC*VHSVKF
Trigger: GAACTTCACCGAGTGCACCCAGCAGCACAGCTGCCA...GGCCTTTCTAGAGCCACGTAGAAAACAATTTTCTGGTTCTTCAAACCTCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp ATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCTCCTCGCAAAGGCACTaGAAGACTTTGGCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: MCPMEVESSQIWKSTIFFSSQRH*KTLAAE
Trigger: CTCTGCTGCCAAAGTCTTCCAGTGCCTTTGCGAGGA...GAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TCTACCATCTTTTTCGGTGAGATCATCAGATGCTGCCACTTAAAGTGCAACAGAGAAGAAGCCGATCAGTaGGTACAGCTGGTCCTCGCA +
Preference number: 4 (lower is better)
Translates to: STIFFGEIIRCCHLKCNREEADQ*VQLVLA
Trigger: TGCGAGGACCAGCTGTACCCACTGATCGGCTTCTTC...TCTGTTGCACTTTAAGTGGCAGCATCTGATGATCTCACCGAAAAAGATGGTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCAATTTGCATACAAATGAAGAAGCCGATCAGTaGGTACAGCTGGTCCTCGCA +
Preference number: 4 (lower is better)
Translates to: VETVKIHAQHWDSNLHTNEEADQ*VQLVLA
Trigger: TGCGAGGACCAGCTGTACCCACTGATCGGCTTCTTC...ATTTGTATGCAAATTGGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp ATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCTCCATCCTGTTAATCTaGCCGCCTACGAACACACGG +
Preference number: 4 (lower is better)
Translates to: MCPMEVESSQIWKSTIFFSILLI*PPTNTR
Trigger: CCGTGTGTTCGTAGGCGGCCAGATTAACAGGATGGA...GAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GGGAATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTATCGCCTTTCTCTCCTaGTCCATCCTGTTAATCTGG +
Preference number: 4 (lower is better)
Translates to: GNVSHGSGVQPDLEIYHLIAFLS*SILLIW
Trigger: CCAGATTAACAGGATGGACCAGGAGAGAAAGGCGAT...AAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACATTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GGGAATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTAGGATGTGGACTTCATaGAATCCCAGTCGGAACTTG +
Preference number: 4 (lower is better)
Translates to: GNVSHGSGVQPDLEIYHLRMWTS*NPSRNL
Trigger: CAAGTTCCGACTGGGATTCCATGAAGTCCACATCCT...AAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACATTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp AAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTTCAGCCCGAGGGTTCTaGTTGATGTCAGGGAGGATG +
Preference number: 4 (lower is better)
Translates to: KDPLLKVTGVRSGSRNLPSARGF*LMSGRM
Trigger: CATCCTCCCTGACATCAACCAGAACCCTCGGGCTGA...AGGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GGGAATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTCTCCCATTCTCCTATTaGAGGAAGCAGGGCATGATT +
Preference number: 4 (lower is better)
Translates to: GNVSHGSGVQPDLEIYHLLPFSY*RKQGMI
Trigger: AATCATGCCCTGCTTCCTCCAATAGGAGAATGGGAG...AAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACATTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp AGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAGGGATGATATATGTATTTGCCTaGCTGTGGAGGCTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: RGNQVPTYPTHSELWTGMIYVFA*LWRLRE
Trigger: CTCTCTGAGCCTCCACAGCCAGGCAAATACATATAT...CATCCCTGTCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TGTGGACTAGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGAGGCACAACAGAAAGGTaGCCATGCCTTTCAAATGTG +
Preference number: 4 (lower is better)
Translates to: CGLEAIKFQLIPHTQSCGGTTER*PCLSNV
Trigger: CACATTTGAAAGGCATGGCCACCTTTCTGTTGTGCC...TCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCTAGTCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp ATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCCCCGGTGAGATGAGCTaGGAAAATGGCAATGACACC +
Preference number: 4 (lower is better)
Translates to: MCPMEVESSQIWKSTIFFPGEMS*ENGNDT
Trigger: GGTGTCATTGCCATTTTCCCAGCTCATCTCACCGGG...GAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TCTTTGAGGTTTGAAGAACCAGAAAATTGTTTTCTACGTGGCTCTAGAAAGGCCGGGCTAGGCTTGGCTTaGACCTGCTCCTGCCTATCT +
Preference number: 4 (lower is better)
Translates to: SLRFEEPENCFLRGSRKAGLGLA*TCSCLS
Trigger: AGATAGGCAGGAGCAGGTCCAAGCCAAGCCTAGCCC...GGCCTTTCTAGAGCCACGTAGAAAACAATTTTCTGGTTCTTCAAACCTCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGATGGGGGCTCAAACACTaGGGATGTTCAACGTGTAGT +
Preference number: 4 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGWGLKH*GCSTCS
Trigger: ACTACACGTTGAACATCCCCAGTGTTTGAGCCCCCA...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GAAAAGTCCCTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAACCCACTGGCATTCGATaGCAGTGCTCTTGCACCCTA +
Preference number: 4 (lower is better)
Translates to: EKSLVQRTSEDIKDPLLKPTGIR*QCSCTL
Trigger: TAGGGTGCAAGAGCACTGCCATCGAATGCCAGTGGG...TTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAGGGACTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CCTTTAAAAGGAATAGGATGCTTTAGAGAGTTTTCCTTGCAGCTCCATCTGCTACAGAATCCAGCTCAATaGCTGGGAGGCAGGCCCATC +
Preference number: 4 (lower is better)
Translates to: PLKGIGCFREFSLQLHLLQNPAQ*LGGRPI
Trigger: GATGGGCCTGCCTCCCAGCCATTGAGCTGGATTCTG...TAGCAGATGGAGCTGCAAGGAAAACTCTCTAAAGCATCCTATTCCTTTTAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp CTTTCAAATGTGTGGGTCCCCACCCATGAGTGGATCCCAAAGTCATTTTATTGGTCACGCCCCAAATGTTaGGCATGCAACGAATCATCA +
Preference number: 4 (lower is better)
Translates to: LSNVWVPTHEWIPKSFYWSRPKC*ACNESS
Trigger: TGATGATTCGTTGCATGCTCAACATTTGGGGCGTGA...CCAATAAAATGACTTTGGGATCCACTCATGGGTGGGGACCCACACATTTGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp CGCCCAGCATTGGGACTCCAATTTGCATACAAATCAAAGACTGAACTCTTAATTGGGGGCGGTAGTTCTTaGTGTGGTCTTCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: RPALGLQFAYKSKTELLIGGGSS*CGLPPH
Trigger: ATGAGGTGGAAGACCACATCAAGAACTACCGCCCCC...AATTAAGAGTTCAGTCTTTGATTTGTATGCAAATTGGAGTCCCAATGCTGGGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp GTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCAATTTGCATACAAATCCGAGTAGAAGGCCTTaGTCTTCCTCTTGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: VETVKIHAQHWDSNLHTNPSRRP*SSSCSA
Trigger: GGCTGAACAAGAGGAAGATCAAGGCCTTCTACTCGG...ATTTGTATGCAAATTGGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGCACACACGCCATAGTTaGAATCAAAGGCATCATGGA +
Preference number: 4 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALHTRHS*NQRHHG
Trigger: TCCATGATGCCTTTGATTTCAACTATGGCGTGTGTG...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp CCTTTAAAAGGAATAGGATGCTTTAGAGAGTTTTCCTTGCAGCTCCATCTGCTATCATCTTGGACACGTTaGGTCCCTCCCGCATCCTCA +
Preference number: 4 (lower is better)
Translates to: PLKGIGCFREFSLQLHLLSSWTR*VPPASS
Trigger: TGAGGATGCGGGAGGGACTCAACGTGTCCAAGATGA...TAGCAGATGGAGCTGCAAGGAAAACTCTCTAAAGCATCCTATTCCTTTTAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp GCTATTTCTCTAGCCTATAAACACAAGACCCAGGGAATGTGTCCCATGGAAGTGCGTCCAAAGAACCAGTaGAGACATCAAAGACCCCTT +
Preference number: 4 (lower is better)
Translates to: AISLAYKHKTQGMCPMEVRPKNQ*RHQRPL
Trigger: AAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACG...CACTTCCATGGGACACATTCCCTGGGTCTTGTGTTTATAGGCTAGAGAAATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp TTATTTCGAGTTAAGAATTATCCCAGAATCCAGCTCAATGGCTGGGAGGCAGGCCGTCCAAAGAACCAGTaGAGACATCAAAGACCCCTT +
Preference number: 4 (lower is better)
Translates to: LFRVKNYPRIQLNGWEAGRPKNQ*RHQRPL
Trigger: AAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACG...GCCTGCCTCCCAGCCATTGAGCTGGATTCTGGGATAATTCTTAACTCGAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp ATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCAAGGCCAGCATTCCCTaGTGGATGCTTCCCCTTATT +
Preference number: 4 (lower is better)
Translates to: MCPMEVESSQIWKSTIFFKASIP*WMLPLI
Trigger: AATAAGGGGAAGCATCCATCAGGGAATGCTGGCCTT...GAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp TCTTTGAGGTTTGAAGAACCAGAAAATTGTTTTCTACGTGGCTCTAGAAAGGCCTGTTGTGGGCAGTTCTaGCATTGTCGCCTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: SLRFEEPENCFLRGSRKACCGQF*HCRLGV
Trigger: GACACCCAGGCGACAATGGCAGAACTGCCCACAACA...GGCCTTTCTAGAGCCACGTAGAAAACAATTTTCTGGTTCTTCAAACCTCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CCTTTAAAAGGAATAGGATGCTTTAGAGAGTTTTCCTTGCAGCTCCATCTGCTAACATTCCGAAGAAGGTaGCATCTGGACCCCGCCAGT +
Preference number: 4 (lower is better)
Translates to: PLKGIGCFREFSLQLHLLTFRRR*HLDPAS
Trigger: ACTGGCGGGGTCCAGATGGCACCTTCTTCGGAATGT...TAGCAGATGGAGCTGCAAGGAAAACTCTCTAAAGCATCCTATTCCTTTTAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CAAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTCTTGCCATAGCCTTTaGCGAAGAAGCCGATCAGTG +
Preference number: 4 (lower is better)
Translates to: QRPLIESDGSEKWFKKFASCHSL*RRSRSV
Trigger: CACTGATCGGCTTCTTCGGCAAAGGCTATGGCAAGA...GGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGAAGGCATCATGGAGGATaGCAATGTAGTCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGRHHGG*QCSLPL
Trigger: CAGTGGAAGACTACATTGGCATCCTCCATGATGCCT...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CCTTTAAAAGGAATAGGATGCTTTAGAGAGTTTTCCTTGCAGCTCCATCTGCTACACGGATCTTGCATTTaGTCCACCTCCTCTTGCGGC +
Preference number: 4 (lower is better)
Translates to: PLKGIGCFREFSLQLHLLHGSCI*STSSCG
Trigger: GCCGCAAGAGGAGGTGGAGCAAATGCAAGATCCGTG...TAGCAGATGGAGCTGCAAGGAAAACTCTCTAAAGCATCCTATTCCTTTTAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp TGTGGACTAGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGAATTCAGACGGAAGGGTaGAATCATGTCCTCAAACCT +
Preference number: 4 (lower is better)
Translates to: CGLEAIKFQLIPHTQSCGIQTEG*NHVLKP
Trigger: AGGTTTGAGGACATGATTGCACCCTTCCGTCTGAAT...TCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCTAGTCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp TCTACCATCTTTTTCGGTGAGATCATCAGATGCTGCCACTTAAAGTGCAACAGATCATTCAGCCTCACCTaGCGAAGGGACTTGACTCTG +
Preference number: 4 (lower is better)
Translates to: STIFFGEIIRCCHLKCNRSFSLT*RRDLTL
Trigger: CAGAGTCAAGTCCCTTCGGCAGGTGAGGCTGAATGA...TCTGTTGCACTTTAAGTGGCAGCATCTGATGATCTCACCGAAAAAGATGGTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGGTGAGATCATCAGATaGTGCCACTTAAAGTGCAAC +
Preference number: 4 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALGEIIR*CHLKCN
Trigger: GTTGCACTTTAAGTGGCAGCATCTGATGATCTCACC...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp TTATTTCGAGTTAAGAATTATCCCAGAATCCAGCTCAATGGCTGGGAGGCAGGCACAGAAAGGTGGCCATaGCTTTCAAATGTGTGGGTC +
Preference number: 4 (lower is better)
Translates to: LFRVKNYPRIQLNGWEAGTERWP*LSNVWV
Trigger: GACCCACACATTTGAAAGGCATGGCCACCTTTCTGT...GCCTGCCTCCCAGCCATTGAGCTGGATTCTGGGATAATTCTTAACTCGAAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GCTATTTCTCTAGCCTATAAACACAAGACCCAGGGAATGTGTCCCATGGAAGTGACAGAAAGGTGGCCATaGCTTTCAAATGTGTGGGTC +
Preference number: 4 (lower is better)
Translates to: AISLAYKHKTQGMCPMEVTERWP*LSNVWV
Trigger: GACCCACACATTTGAAAGGCATGGCCACCTTTCTGT...CACTTCCATGGGACACATTCCCTGGGTCTTGTGTTTATAGGCTAGAGAAATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GAAAAGTCCCTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGGCATTCGATGGCAGTaGTCTTGCACCCTAGCTTTG +
Preference number: 4 (lower is better)
Translates to: EKSLVQRTSEDIKDPLLKGIRWQ*SCTLAL
Trigger: CAAAGCTAGGGTGCAAGAGCACTGCCATCGAATGCC...TTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAGGGACTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCAATTTGCATACAAATCAGGCTGGGTGCTGTTaGCATAGTGCTCATATGTGG +
Preference number: 4 (lower is better)
Translates to: VETVKIHAQHWDSNLHTNQAGCC*HSAHMW
Trigger: CCACATATGAGCACTATGCCAACAGCACCCAGCCTG...ATTTGTATGCAAATTGGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CAAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTGGCCAGGTAGGAAATaGTCGTCCAGAAAATGGCCA +
Preference number: 4 (lower is better)
Translates to: QRPLIESDGSEKWFKKFAWPGRK*SSRKWP
Trigger: TGGCCATTTTCTGGACGACCATTTCCTACCTGGCCA...GGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp ATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGGTGAGATCCAACCACCAGAATGTTaGGCTTCATTCTCCCGAGAC +
Preference number: 4 (lower is better)
Translates to: MEVESSQIWKSTIFFGEIQPPEC*ASFSRD
Trigger: GTCTCGGGAGAATGAAGCCCAACATTCTGGTGGTTG...GATCTCACCGAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CCTTTAAAAGGAATAGGATGCTTTAGAGAGTTTTCCTTGCAGCTCCATCTGCTAACTGGAAGATGGTGGTaGCCTGCTCCTCCTTCACCA +
Preference number: 4 (lower is better)
Translates to: PLKGIGCFREFSLQLHLLTGRWW*PAPPSP
Trigger: TGGTGAAGGAGGAGCAGGCCACCACCATCTTCCAGT...TAGCAGATGGAGCTGCAAGGAAAACTCTCTAAAGCATCCTATTCCTTTTAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CTTTCAAATGTGTGGGTCCCCACCCATGAGTGGATCCCAAAGTCATTTTATTGGATCGCCTTTCTCTCCTaGTCCATCCTGTTAATCTGG +
Preference number: 4 (lower is better)
Translates to: LSNVWVPTHEWIPKSFYWIAFLS*SILLIW
Trigger: CCAGATTAACAGGATGGACCAGGAGAGAAAGGCGAT...CCAATAAAATGACTTTGGGATCCACTCATGGGTGGGGACCCACACATTTGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TTATTTCGAGTTAAGAATTATCCCAGAATCCAGCTCAATGGCTGGGAGGCAGGCAGGATGTGGACTTCATaGAATCCCAGTCGGAACTTG +
Preference number: 4 (lower is better)
Translates to: LFRVKNYPRIQLNGWEAGRMWTS*NPSRNL
Trigger: CAAGTTCCGACTGGGATTCCATGAAGTCCACATCCT...GCCTGCCTCCCAGCCATTGAGCTGGATTCTGGGATAATTCTTAACTCGAAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp ATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGTGAGCACGTTTTCCTaGTTTCCTCGGATCAGGATG +
Preference number: 4 (lower is better)
Translates to: MCPMEVESSQIWKSTIFFVSTFS*FPRIRM
Trigger: CATCCTGATCCGAGGAAACCAGGAAAACGTGCTCAC...GAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp ATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGGTGAGATCACACACTCAGAGCTGTaGACAGGGATGTCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: MEVESSQIWKSTIFFGEITHSEL*TGMSKP
Trigger: AGGCTTTGACATCCCTGTCCACAGCTCTGAGTGTGT...GATCTCACCGAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp ATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGGTGAGATCTGTGTCCCATGGAAGTaGAGTCCAGCCAGATTTGGA +
Preference number: 4 (lower is better)
Translates to: MEVESSQIWKSTIFFGEICVPWK*SPARFG
Trigger: TCCAAATCTGGCTGGACTCCACTTCCATGGGACACA...GATCTCACCGAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CTTTCAAATGTGTGGGTCCCCACCCATGAGTGGATCCCAAAGTCATTTTATTGGCTCCCATTCTCCTATTaGAGGAAGCAGGGCATGATT +
Preference number: 4 (lower is better)
Translates to: LSNVWVPTHEWIPKSFYWLPFSY*RKQGMI
Trigger: AATCATGCCCTGCTTCCTCCAATAGGAGAATGGGAG...CCAATAAAATGACTTTGGGATCCACTCATGGGTGGGGACCCACACATTTGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GCTATTTCTCTAGCCTATAAACACAAGACCCAGGGAATGTGTCCCATGGAAGTGGACGGGAGTGAGAAGTaGTTCAAGAAATTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: AISLAYKHKTQGMCPMEVDGSEK*FKKFAW
Trigger: CCAGGCAAATTTCTTGAACCACTTCTCACTCCCGTC...CACTTCCATGGGACACATTCCCTGGGTCTTGTGTTTATAGGCTAGAGAAATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GGGAATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTGTCCCCACCCATGAGTaGATCCCAAAGTCATTTTAT +
Preference number: 4 (lower is better)
Translates to: GNVSHGSGVQPDLEIYHLVPTHE*IPKSFY
Trigger: ATAAAATGACTTTGGGATCCACTCATGGGTGGGGAC...AAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACATTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGAGGCACAACAGAAAGGTaGCCATGCCTTTCAAATGTG +
Preference number: 4 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGGTTER*PCLSNV
Trigger: CACATTTGAAAGGCATGGCCACCTTTCTGTTGTGCC...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR CAA 72 bp GCAGTCGTACCACCAAACAACTCACCTTTACGCTTCTaGGTTATGTCTAGAGCTGCAAATACCCTCACTTGG +
Preference number: 4 (lower is better)
Translates to: AVVPPNNSPLRF*VMSRAANTLTW
Trigger: CCAAGTGAGGGTATTTGCAGCTCTAGACATAACCAAGAAGCGTAAAGGTGAGTTGTTTGGTGGTACGACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp CCTTTAAAAGGAATAGGATGCTTTAGAGAGTTTTCCTTGCAGCTCCATCTGCTACCGAGTAGAAGGCCTTaGTCTTCCTCTTGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: PLKGIGCFREFSLQLHLLPSRRP*SSSCSA
Trigger: GGCTGAACAAGAGGAAGATCAAGGCCTTCTACTCGG...TAGCAGATGGAGCTGCAAGGAAAACTCTCTAAAGCATCCTATTCCTTTTAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp CGCCCAGCATTGGGACTCCAATTTGCATACAAATCAAAGACTGAACTCTTAATTCAGTGGCCTCATCCTTaGAGCCATCATTCAGACGGA +
Preference number: 4 (lower is better)
Translates to: RPALGLQFAYKSKTELLIQWPHP*SHHSDG
Trigger: TCCGTCTGAATGATGGCTTCAAGGATGAGGCCACTG...AATTAAGAGTTCAGTCTTTGATTTGTATGCAAATTGGAGTCCCAATGCTGGGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp ATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGGTGAGATCACTGGCAGTAAAAGGTaGGCACGTTTTCCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: MEVESSQIWKSTIFFGEITGSKR*ARFPGF
Trigger: GAAACCAGGAAAACGTGCTCACCTTTTACTGCCAGT...GATCTCACCGAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CGCCCAGCATTGGGACTCCAATTTGCATACAAATCAAAGACTGAACTCTTAATTTGTTGTAGCCAAAGGTaGGCATGCAGAAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: RPALGLQFAYKSKTELLICCSQR*ACRRCC
Trigger: GCAGCACCTTCTGCATGCGCACCTTTGGCTACAACA...AATTAAGAGTTCAGTCTTTGATTTGTATGCAAATTGGAGTCCCAATGCTGGGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp ATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCAGGCATCATGGAGGATaGCAATGTAGTCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: MCPMEVESSQIWKSTIFFRHHGG*QCSLPL
Trigger: CAGTGGAAGACTACATTGGCATCCTCCATGATGCCT...GAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CGCCCAGCATTGGGACTCCAATTTGCATACAAATCAAAGACTGAACTCTTAATTTCGTTTCCGTGTGTGTaGGCTGCAAGTCTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: RPALGLQFAYKSKTELLISFPCV*AASLSV
Trigger: CACACTGAGACTTGCAGCGCACACACACGGAAACGA...AATTAAGAGTTCAGTCTTTGATTTGTATGCAAATTGGAGTCCCAATGCTGGGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CCTTTAAAAGGAATAGGATGCTTTAGAGAGTTTTCCTTGCAGCTCCATCTGCTACAGGCTGGGTGCTGTTaGCATAGTGCTCATATGTGG +
Preference number: 4 (lower is better)
Translates to: PLKGIGCFREFSLQLHLLQAGCC*HSAHMW
Trigger: CCACATATGAGCACTATGCCAACAGCACCCAGCCTG...TAGCAGATGGAGCTGCAAGGAAAACTCTCTAAAGCATCCTATTCCTTTTAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CCTTTAAAAGGAATAGGATGCTTTAGAGAGTTTTCCTTGCAGCTCCATCTGCTATCAGGCACCAAGTTCTaGACAAAAATGTCCGCCCGG +
Preference number: 4 (lower is better)
Translates to: PLKGIGCFREFSLQLHLLSGTKF*TKMSAR
Trigger: CCGGGCGGACATTTTTGTCCAGAACTTGGTGCCTGA...TAGCAGATGGAGCTGCAAGGAAAACTCTCTAAAGCATCCTATTCCTTTTAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GAAAAGTCCCTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAATGGCCAGGTAGGAAATaGTCGTCCAGAAAATGGCCA +
Preference number: 4 (lower is better)
Translates to: EKSLVQRTSEDIKDPLLKWPGRK*SSRKWP
Trigger: TGGCCATTTTCTGGACGACCATTTCCTACCTGGCCA...TTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAGGGACTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CGCCCAGCATTGGGACTCCAATTTGCATACAAATCAAAGACTGAACTCTTAATTCAATGGTGGCTGAGATaGCCAGGTAGGAAATGGTCG +
Preference number: 4 (lower is better)
Translates to: RPALGLQFAYKSKTELLIQWWLR*PGRKWS
Trigger: CGACCATTTCCTACCTGGCCATCTCAGCCACCATTG...AATTAAGAGTTCAGTCTTTGATTTGTATGCAAATTGGAGTCCCAATGCTGGGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CCTTTAAAAGGAATAGGATGCTTTAGAGAGTTTTCCTTGCAGCTCCATCTGCTATCCTCGCAAAGGCACTaGAAGACTTTGGCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: PLKGIGCFREFSLQLHLLSSQRH*KTLAAE
Trigger: CTCTGCTGCCAAAGTCTTCCAGTGCCTTTGCGAGGA...TAGCAGATGGAGCTGCAAGGAAAACTCTCTAAAGCATCCTATTCCTTTTAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp AAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTCAACCACCAGAATGTTaGGCTTCATTCTCCCGAGAC +
Preference number: 4 (lower is better)
Translates to: KDPLLKVTGVRSGSRNLPQPPEC*ASFSRD
Trigger: GTCTCGGGAGAATGAAGCCCAACATTCTGGTGGTTG...AGGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GAAAAGTCCCTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAACAACCACCAGAATGTTaGGCTTCATTCTCCCGAGAC +
Preference number: 4 (lower is better)
Translates to: EKSLVQRTSEDIKDPLLKQPPEC*ASFSRD
Trigger: GTCTCGGGAGAATGAAGCCCAACATTCTGGTGGTTG...TTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAGGGACTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CGCCCAGCATTGGGACTCCAATTTGCATACAAATCAAAGACTGAACTCTTAATTGCCAGTAGATGTCTATaGTCTTCTTGCCCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: RPALGLQFAYKSKTELLIASRCL*SSCPAP
Trigger: CGGAGCAGGGCAAGAAGACCATAGACATCTACTGGC...AATTAAGAGTTCAGTCTTTGATTTGTATGCAAATTGGAGTCCCAATGCTGGGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CGCCCAGCATTGGGACTCCAATTTGCATACAAATCAAAGACTGAACTCTTAATTTCCATCCTGTTAATCTaGCCGCCTACGAACACACGG +
Preference number: 4 (lower is better)
Translates to: RPALGLQFAYKSKTELLISILLI*PPTNTR
Trigger: CCGTGTGTTCGTAGGCGGCCAGATTAACAGGATGGA...AATTAAGAGTTCAGTCTTTGATTTGTATGCAAATTGGAGTCCCAATGCTGGGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCAATTTGCATACAAATGTGAGCACGTTTTCCTaGTTTCCTCGGATCAGGATG +
Preference number: 4 (lower is better)
Translates to: VETVKIHAQHWDSNLHTNVSTFS*FPRIRM
Trigger: CATCCTGATCCGAGGAAACCAGGAAAACGTGCTCAC...ATTTGTATGCAAATTGGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGAGTCCCCACCCATGAGTaGATCCCAAAGTCATTTTAT +
Preference number: 4 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGVPTHE*IPKSFY
Trigger: ATAAAATGACTTTGGGATCCACTCATGGGTGGGGAC...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
3UTR CAA 72 bp TGTCGTCTGTTCTTAACCATGCCTGAAATCTTACCCTaGCCACTAGACTCCTTCAACCTTGCCCCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: CRLFLTMPEILP*PLDSFNLAPSL
Trigger: TAAAGAAGGGGCAAGGTTGAAGGAGTCTAGTGGCAAGGGTAAGATTTCAGGCATGGTTAAGAACAGACGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp ATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGGTGAGATCTACCATCTTTTTCGGTaGGATCATCAGATGCTGCCA +
Preference number: 4 (lower is better)
Translates to: MEVESSQIWKSTIFFGEIYHLFR*DHQMLP
Trigger: TGGCAGCATCTGATGATCTCACCGAAAAAGATGGTA...GATCTCACCGAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp CAAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCGTTCTTAACCATGCCTaGAATCTTACCCTTGCCACT +
Preference number: 4 (lower is better)
Translates to: QRPLIESDGSEKWFKKFAVLNHA*NLTLAT
Trigger: AGTGGCAAGGGTAAGATTTCAGGCATGGTTAAGAAC...GGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp GTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCAATTTGCATACAAATCGAAGCCTGACACCATaGTCATGGTCTGGTAATAGT +
Preference number: 4 (lower is better)
Translates to: VETVKIHAQHWDSNLHTNRSLTP*SWSGNS
Trigger: ACTATTACCAGACCATGAGCATGGTGTCAGGCTTCG...ATTTGTATGCAAATTGGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp TCTACCATCTTTTTCGGTGAGATCATCAGATGCTGCCACTTAAAGTGCAACAGACGAAGCCTGACACCATaGTCATGGTCTGGTAATAGT +
Preference number: 4 (lower is better)
Translates to: STIFFGEIIRCCHLKCNRRSLTP*SWSGNS
Trigger: ACTATTACCAGACCATGAGCATGGTGTCAGGCTTCG...TCTGTTGCACTTTAAGTGGCAGCATCTGATGATCTCACCGAAAAAGATGGTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp TCTTTGAGGTTTGAAGAACCAGAAAATTGTTTTCTACGTGGCTCTAGAAAGGCCTCTTGCCATAGCCTTTaGCGAAGAAGCCGATCAGTG +
Preference number: 4 (lower is better)
Translates to: SLRFEEPENCFLRGSRKASCHSL*RRSRSV
Trigger: CACTGATCGGCTTCTTCGGCAAAGGCTATGGCAAGA...GGCCTTTCTAGAGCCACGTAGAAAACAATTTTCTGGTTCTTCAAACCTCAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp TCTTTGAGGTTTGAAGAACCAGAAAATTGTTTTCTACGTGGCTCTAGAAAGGCCCGAACACACGGATCTTaGATTTGCTCCACCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SLRFEEPENCFLRGSRKARTHGS*ICSTSS
Trigger: AGAGGAGGTGGAGCAAATGCAAGATCCGTGTGTTCG...GGCCTTTCTAGAGCCACGTAGAAAACAATTTTCTGGTTCTTCAAACCTCAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CCTTTAAAAGGAATAGGATGCTTTAGAGAGTTTTCCTTGCAGCTCCATCTGCTACGAACACACGGATCTTaGATTTGCTCCACCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PLKGIGCFREFSLQLHLLRTHGS*ICSTSS
Trigger: AGAGGAGGTGGAGCAAATGCAAGATCCGTGTGTTCG...TAGCAGATGGAGCTGCAAGGAAAACTCTCTAAAGCATCCTATTCCTTTTAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp ATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGGTGAGATCATCAGATaGTGCCACTTAAAGTGCAAC +
Preference number: 4 (lower is better)
Translates to: MCPMEVESSQIWKSTIFFGEIIR*CHLKCN
Trigger: GTTGCACTTTAAGTGGCAGCATCTGATGATCTCACC...GAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CCTTTAAAAGGAATAGGATGCTTTAGAGAGTTTTCCTTGCAGCTCCATCTGCTACTGAGACAGAAGAAATaGTTGAACCCGGGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: PLKGIGCFREFSLQLHLLLRQKK*LNPGGG
Trigger: ACCTCCTCCCGGGTTCAAGCATTTCTTCTGTCTCAG...TAGCAGATGGAGCTGCAAGGAAAACTCTCTAAAGCATCCTATTCCTTTTAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CAAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCGCATTCCCTGATGGATaGTTCCCCTTATTTCGAGTT +
Preference number: 4 (lower is better)
Translates to: QRPLIESDGSEKWFKKFAAFPDG*FPLFRV
Trigger: AACTCGAAATAAGGGGAAGCATCCATCAGGGAATGC...GGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCAATTTGCATACAAATCATAGTGCTCATATGTaGGCACCACATCGATCGTGT +
Preference number: 4 (lower is better)
Translates to: VETVKIHAQHWDSNLHTNHSAHM*APHRSC
Trigger: ACACGATCGATGTGGTGCCCACATATGAGCACTATG...ATTTGTATGCAAATTGGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TCTACCATCTTTTTCGGTGAGATCATCAGATGCTGCCACTTAAAGTGCAACAGACATAGTGCTCATATGTaGGCACCACATCGATCGTGT +
Preference number: 4 (lower is better)
Translates to: STIFFGEIIRCCHLKCNRHSAHM*APHRSC
Trigger: ACACGATCGATGTGGTGCCCACATATGAGCACTATG...TCTGTTGCACTTTAAGTGGCAGCATCTGATGATCTCACCGAAAAAGATGGTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp AAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTAGGATGTGGACTTCATaGAATCCCAGTCGGAACTTG +
Preference number: 4 (lower is better)
Translates to: KDPLLKVTGVRSGSRNLPRMWTS*NPSRNL
Trigger: CAAGTTCCGACTGGGATTCCATGAAGTCCACATCCT...AGGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp ATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCATTCACGCCCAGCATTaGGACTCCAATTTGCATACA +
Preference number: 4 (lower is better)
Translates to: MCPMEVESSQIWKSTIFFIHAQH*DSNLHT
Trigger: TGTATGCAAATTGGAGTCCCAATGCTGGGCGTGAAT...GAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GAAAAGTCCCTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAACTCCCATTCTCCTATTaGAGGAAGCAGGGCATGATT +
Preference number: 4 (lower is better)
Translates to: EKSLVQRTSEDIKDPLLKLPFSY*RKQGMI
Trigger: AATCATGCCCTGCTTCCTCCAATAGGAGAATGGGAG...TTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAGGGACTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp ATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCATATATGTATTTGCCTaGCTGTGGAGGCTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: MCPMEVESSQIWKSTIFFIYVFA*LWRLRE
Trigger: CTCTCTGAGCCTCCACAGCCAGGCAAATACATATAT...GAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGAGTGACATTTTTGTTTTaGTCGTTTCCGTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGVTFLF*SFPCVC
Trigger: GCACACACACGGAAACGACCAAAACAAAAATGTCAC...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp CCTTTAAAAGGAATAGGATGCTTTAGAGAGTTTTCCTTGCAGCTCCATCTGCTAACTGCCAGTTCTTCTTaGACCCAACCACCAGAATGT +
Preference number: 4 (lower is better)
Translates to: PLKGIGCFREFSLQLHLLTASSS*TQPPEC
Trigger: ACATTCTGGTGGTTGGGTTCAAGAAGAACTGGCAGT...TAGCAGATGGAGCTGCAAGGAAAACTCTCTAAAGCATCCTATTCCTTTTAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp GTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCAATTTGCATACAAATTACCATCTTTTTCGGTaGGATCATCAGATGCTGCCA +
Preference number: 4 (lower is better)
Translates to: VETVKIHAQHWDSNLHTNYHLFR*DHQMLP
Trigger: TGGCAGCATCTGATGATCTCACCGAAAAAGATGGTA...ATTTGTATGCAAATTGGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp TCTACCATCTTTTTCGGTGAGATCATCAGATGCTGCCACTTAAAGTGCAACAGAGGACCAAGGACTCTTTaGGGTTTGAAGAACCAGAAA +
Preference number: 4 (lower is better)
Translates to: STIFFGEIIRCCHLKCNRGPRTL*GLKNQK
Trigger: TTTCTGGTTCTTCAAACCTCAAAGAGTCCTTGGTCC...TCTGTTGCACTTTAAGTGGCAGCATCTGATGATCTCACCGAAAAAGATGGTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp ATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGGTGAGATCGCCCCAATTTACCTCTaGCTTCTTGTAGATGACATA +
Preference number: 4 (lower is better)
Translates to: MEVESSQIWKSTIFFGEIAPIYL*LLVDDI
Trigger: TATGTCATCTACAAGAAGCCAGAGGTAAATTGGGGC...GATCTCACCGAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp ATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGTGACATTTTTGTTTTaGTCGTTTCCGTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: MCPMEVESSQIWKSTIFFVTFLF*SFPCVC
Trigger: GCACACACACGGAAACGACCAAAACAAAAATGTCAC...GAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp ATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGGTGAGATCCACCTTTACGCTTCTTaGTTATGTCTAGAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: MEVESSQIWKSTIFFGEIHLYAS*LCLELQ
Trigger: TTGCAGCTCTAGACATAACCAAGAAGCGTAAAGGTG...GATCTCACCGAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGAAATGCTAACATCCTTTaGGTTGTAACTCCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGNANIL*VVTPER
Trigger: CCTTTCTGGAGTTACAACCCAAAGGATGTTAGCATT...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
3UTR CAA 72 bp GTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATaGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAAT +
Preference number: 4 (lower is better)
Translates to: VQRTSEDIKDPL*KVTGVRSGSRN
Trigger: ATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR TCA 90 bp CGCCCAGCATTGGGACTCCAATTTGCATACAAATCAAAGACTGAACTCTTAATTTACCATCTTTTTCGGTaGGATCATCAGATGCTGCCA +
Preference number: 4 (lower is better)
Translates to: RPALGLQFAYKSKTELLIYHLFR*DHQMLP
Trigger: TGGCAGCATCTGATGATCTCACCGAAAAAGATGGTA...AATTAAGAGTTCAGTCTTTGATTTGTATGCAAATTGGAGTCCCAATGCTGGGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CCTTTAAAAGGAATAGGATGCTTTAGAGAGTTTTCCTTGCAGCTCCATCTGCTAGGTGAGATCATCAGATaGTGCCACTTAAAGTGCAAC +
Preference number: 4 (lower is better)
Translates to: PLKGIGCFREFSLQLHLLGEIIR*CHLKCN
Trigger: GTTGCACTTTAAGTGGCAGCATCTGATGATCTCACC...TAGCAGATGGAGCTGCAAGGAAAACTCTCTAAAGCATCCTATTCCTTTTAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CGCCCAGCATTGGGACTCCAATTTGCATACAAATCAAAGACTGAACTCTTAATTCTGTGTGTGGACAAATaGAAGGCACAACAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: RPALGLQFAYKSKTELLILCVDK*KAQQKG
Trigger: ACCTTTCTGTTGTGCCTTGCATTTGTCCACACACAG...AATTAAGAGTTCAGTCTTTGATTTGTATGCAAATTGGAGTCCCAATGCTGGGCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCAATTTGCATACAAATGCCCCAATTTACCTCTaGCTTCTTGTAGATGACATA +
Preference number: 4 (lower is better)
Translates to: VETVKIHAQHWDSNLHTNAPIYL*LLVDDI
Trigger: TATGTCATCTACAAGAAGCCAGAGGTAAATTGGGGC...ATTTGTATGCAAATTGGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CAAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCGAGTCCAGCCAGATTTaGAAATCTACCATCTTTTTC +
Preference number: 4 (lower is better)
Translates to: QRPLIESDGSEKWFKKFAESSQI*KSTIFF
Trigger: GAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTC...GGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CGCCCAGCATTGGGACTCCAATTTGCATACAAATCAAAGACTGAACTCTTAATTATTCACGCCCAGCATTaGGACTCCAATTTGCATACA +
Preference number: 4 (lower is better)
Translates to: RPALGLQFAYKSKTELLIIHAQH*DSNLHT
Trigger: TGTATGCAAATTGGAGTCCCAATGCTGGGCGTGAAT...AATTAAGAGTTCAGTCTTTGATTTGTATGCAAATTGGAGTCCCAATGCTGGGCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CCTTTAAAAGGAATAGGATGCTTTAGAGAGTTTTCCTTGCAGCTCCATCTGCTAGTCCCCACCCATGAGTaGATCCCAAAGTCATTTTAT +
Preference number: 4 (lower is better)
Translates to: PLKGIGCFREFSLQLHLLVPTHE*IPKSFY
Trigger: ATAAAATGACTTTGGGATCCACTCATGGGTGGGGAC...TAGCAGATGGAGCTGCAAGGAAAACTCTCTAAAGCATCCTATTCCTTTTAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GAAAAGTCCCTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAACACCTTTACGCTTCTTaGTTATGTCTAGAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: EKSLVQRTSEDIKDPLLKHLYAS*LCLELQ
Trigger: TTGCAGCTCTAGACATAACCAAGAAGCGTAAAGGTG...TTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAGGGACTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp AAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTGAGTCCAGCCAGATTTaGAAATCTACCATCTTTTTC +
Preference number: 4 (lower is better)
Translates to: KDPLLKVTGVRSGSRNLPESSQI*KSTIFF
Trigger: GAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTC...AGGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp CGCCCAGCATTGGGACTCCAATTTGCATACAAATCAAAGACTGAACTCTTAATTGTGACATTTTTGTTTTaGTCGTTTCCGTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: RPALGLQFAYKSKTELLIVTFLF*SFPCVC
Trigger: GCACACACACGGAAACGACCAAAACAAAAATGTCAC...AATTAAGAGTTCAGTCTTTGATTTGTATGCAAATTGGAGTCCCAATGCTGGGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp GTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCAATTTGCATACAAATAATGCTAACATCCTTTaGGTTGTAACTCCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: VETVKIHAQHWDSNLHTNNANIL*VVTPER
Trigger: CCTTTCTGGAGTTACAACCCAAAGGATGTTAGCATT...ATTTGTATGCAAATTGGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR GCA 90 bp CGCCCAGCATTGGGACTCCAATTTGCATACAAATCAAAGACTGAACTCTTAATTATATATATATGTATTTaGCTGGCTGTGGAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: RPALGLQFAYKSKTELLIIYICI*LAVEAQ
Trigger: CTGAGCCTCCACAGCCAGGCAAATACATATATATAT...AATTAAGAGTTCAGTCTTTGATTTGTATGCAAATTGGAGTCCCAATGCTGGGCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CCA 90 bp TCTTTGAGGTTTGAAGAACCAGAAAATTGTTTTCTACGTGGCTCTAGAAAGGCCGAGTCCAGCCAGATTTaGAAATCTACCATCTTTTTC +
Preference number: 4 (lower is better)
Translates to: SLRFEEPENCFLRGSRKAESSQI*KSTIFF
Trigger: GAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTC...GGCCTTTCTAGAGCCACGTAGAAAACAATTTTCTGGTTCTTCAAACCTCAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS CCA 90 bp GGGCCTTGGGGTCCAAAGCGCCAGAGACTGATGGCCTGGCACCTCTaGCGCTGGCTTCCTTCCCGTCCTCCGCTGGGTCAAACACGGGGT +
Preference number: 5 (lower is better)
Translates to: GPWGPKRQRLMAWHL*RWLPSRPPLGQTRG
Trigger: ACCCCGTGTTTGACCCAGCGGAGGACGGGAAGGAAGCCAGCGCCAGAGGTGCCAGGCCATCAGTCTCTGGCGCTTTGGACCCCAAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000566786.5
CDS CCA 90 bp CCTTCACCAGGGCCTTGGGGTCCAAAGCGCCAGAGACTGATGGCCTaGCACCTCTGGCGCTGGCTTCCTTCCCGTCCTCCGCTGGGTCAA +
Preference number: 5 (lower is better)
Translates to: PSPGPWGPKRQRLMA*HLWRWLPSRPPLGQ
Trigger: TTGACCCAGCGGAGGACGGGAAGGAAGCCAGCGCCAGAGGTGCCAGGCCATCAGTCTCTGGCGCTTTGGACCCCAAGGCCCTGGTGAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000566786.5
CDS-3UTR CAA 90 bp GTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAGACAGTGGGCAGTTCTGCCATaGTCGCCTGGGTGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: VSLAVPQSLVASPEAVRQWAVLP*SPGCPG
Trigger: CCCTGGACACCCAGGCGACAATGGCAGAACTGCCCA...CTGTCTGACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAGACAGCTGTTCCTAGTCAGCTaGGCCGTGCCCCAGTCCCTC +
Preference number: 5 (lower is better)
Translates to: VSLAVPQSLVASPEAVRQLFLVS*AVPQSL
Trigger: GAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAG...CTGTCTGACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS TCA 90 bp CCACCGTGTGCATGGCCACACCCACGGCATTGGCGAAAGCGAAAATaGGGCCGATGGAGCCCCCAAGCTCTGGGCCCAGACTCCGGGAGA +
Preference number: 5 (lower is better)
Translates to: PPCAWPHPRHWRKRK*GRWSPQALGPDSGR
Trigger: TCTCCCGGAGTCTGGGCCCAGAGCTTGGGGGCTCCATCGGCCTCATTTTCGCTTTCGCCAATGCCGTGGGTGTGGCCATGCACACGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS-3UTR CAA 90 bp GGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAGCCATGAGGGTCCCCTaGGGGATGGCTATAGCAGGG +
Preference number: 5 (lower is better)
Translates to: GARELFLVSLAVPQSLVAAMRVP*GMAIAG
Trigger: CCCTGCTATAGCCATCCCCAAGGGGACCCTCATGGC...TGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CCCTCAGGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCTCAGGCATCCTCTGCTaGTGGGGTCCGATGAGCACG +
Preference number: 5 (lower is better)
Translates to: PSGARELFLVSLAVPQSLSGILC*WGPMST
Trigger: CGTGCTCATCGGACCCCACAAGCAGAGGATGCCTGA...GAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCCTGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS GCA 90 bp GGTCAGCCAGTGTGGGCCGGACCTTCCGGGGCTCACCAGGCTGGGTaGTGTTGGCATAGTGCTCATATGTGGGCACCACATCGATCGTGT +
Preference number: 5 (lower is better)
Translates to: GQPVWAGPSGAHQAG*CWHSAHMWAPHRSC
Trigger: ACACGATCGATGTGGTGCCCACATATGAGCACTATGCCAACAGCACCCAGCCTGGTGAGCCCCGGAAGGTCCGGCCCACACTGGCTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS GCA 90 bp TACTCCTGGAGCAGGTCCCGCACGGTCTCTGCAAAGCCCACCGTGTaGATGGCCACACCCACGGCATTGGCGAAAGCGAAAATGAGGCCG +
Preference number: 5 (lower is better)
Translates to: YSWSRSRTVSAKPTV*MATPTALAKAKMRP
Trigger: CGGCCTCATTTTCGCTTTCGCCAATGCCGTGGGTGTGGCCATGCACACGGTGGGCTTTGCAGAGACCGTGCGGGACCTGCTCCAGGAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS GCA 90 bp TCTATGGTCTTCTTGCCCTGCTCCGACTGGAAGATGGTGGTGGCCTaGTCCTCCTTCACCAGGGCCTTGGGGTCCACTCTGGCGCTGGCT +
Preference number: 5 (lower is better)
Translates to: SMVFLPCSDWKMVVA*SSFTRALGSTLALA
Trigger: AGCCAGCGCCAGAGTGGACCCCAAGGCCCTGGTGAAGGAGGAGCAGGCCACCACCATCTTCCAGTCGGAGCAGGGCAAGAAGACCATAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262502.5
ENST00000563236.6
CDS-3UTR CAA 90 bp TTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCGCCACACCCACGGCATaGGCGAAAGCGAAAATGAGG +
Preference number: 5 (lower is better)
Translates to: FLVSLAVPQSLVASPEAVATPTA*AKAKMR
Trigger: CCTCATTTTCGCTTTCGCCAATGCCGTGGGTGTGGC...GACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCACACTTGGTGTGCCCGTaGGCGATGAGCTGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: GARELFLVSLAVPQSLVAHLVCP*AMSWSS
Trigger: TGAGCTCCAGCTCATCGCCAACGGGCACACCAAGTG...TGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp TTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCTCTTGCACCCTAGCTTaGGGGGCTCAAACACTGGGG +
Preference number: 5 (lower is better)
Translates to: FLVSLAVPQSLVASPEAVSCTLA*GAQTLG
Trigger: CCCCAGTGTTTGAGCCCCCAAAGCTAGGGTGCAAGA...GACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAGACAGATGTCTATGGTCTTCTaGCCCTGCTCCGACTGGAAG +
Preference number: 5 (lower is better)
Translates to: VSLAVPQSLVASPEAVRQMSMVF*PCSDWK
Trigger: CTTCCAGTCGGAGCAGGGCAAGAAGACCATAGACAT...CTGTCTGACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAGACAGACGAACACACGGATCTaGCATTTGCTCCACCTCCTC +
Preference number: 5 (lower is better)
Translates to: VSLAVPQSLVASPEAVRQTNTRI*HLLHLL
Trigger: GAGGAGGTGGAGCAAATGCAAGATCCGTGTGTTCGT...CTGTCTGACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS GCA 90 bp CGATGGCGTAGGCCAGCAGGTAGCCACGCACGGGCTCCTTGTTCTTaGCATAGCCTTTGCCGAAGAAGCCGATCAGTGGGTACAGCTGGT +
Preference number: 5 (lower is better)
Translates to: RWRRPAGSHARAPCS*HSLCRRSRSVGTAG
Trigger: ACCAGCTGTACCCACTGATCGGCTTCTTCGGCAAAGGCTATGGCAAGAACAAGGAGCCCGTGCGTGGCTACCTGCTGGCCTACGCCATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS GCA 90 bp TCTATGGTCTTCTTGCCCTGCTCCGACTGGAAGATGGTGGTGGCCTaGTCCTCCTTCACCAGGGCCTTGGGGTCCAAAGCGCCAGAGACT +
Preference number: 5 (lower is better)
Translates to: SMVFLPCSDWKMVVA*SSFTRALGSKAPET
Trigger: AGTCTCTGGCGCTTTGGACCCCAAGGCCCTGGTGAAGGAGGAGCAGGCCACCACCATCTTCCAGTCGGAGCAGGGCAAGAAGACCATAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000566786.5
CDS CCA 90 bp TTTTCCTGGTTTCCTCGGATCAGGATGACTGGAGGTCTGAGGTCCTaGGACAGGGTCTCCAGCCAGGCCATGTACAGCGAGCTGGGGCAC +
Preference number: 5 (lower is better)
Translates to: FSWFPRIRMTGGLRS*DRVSSQAMYSELGH
Trigger: GTGCCCCAGCTCGCTGTACATGGCCTGGCTGGAGACCCTGTCCCAGGACCTCAGACCTCCAGTCATCCTGATCCGAGGAAACCAGGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000563352.1
ENST00000566786.5
CDS-3UTR CAA 90 bp GAGCCTGTAGGTCCTACAGGTGAGGCTCCCATTCTCCTATTGGAGGAAGCAGGGTGGGCAGTTCTGCCATaGTCGCCTGGGTGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: EPVGPTGEAPILLLEEAGWAVLP*SPGCPG
Trigger: CCCTGGACACCCAGGCGACAATGGCAGAACTGCCCA...CCCTGCTTCCTCCAATAGGAGAATGGGAGCCTCACCTGTAGGACCTACAGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCACCACCTGACTTGACCTaGCCATTGGTGGAGATGGCT +
Preference number: 5 (lower is better)
Translates to: GARELFLVSLAVPQSLVAPPDLT*PLVEMA
Trigger: AGCCATCTCCACCAATGGCAAGGTCAAGTCAGGTGG...TGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CCCTCAGGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCATGTCTATGGTCTTCTaGCCCTGCTCCGACTGGAAG +
Preference number: 5 (lower is better)
Translates to: PSGARELFLVSLAVPQSLMSMVF*PCSDWK
Trigger: CTTCCAGTCGGAGCAGGGCAAGAAGACCATAGACAT...GAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCCTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CCCTCAGGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCACGAACACACGGATCTaGCATTTGCTCCACCTCCTC +
Preference number: 5 (lower is better)
Translates to: PSGARELFLVSLAVPQSLTNTRI*HLLHLL
Trigger: GAGGAGGTGGAGCAAATGCAAGATCCGTGTGTTCGT...GAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCCTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp TTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCTGTTCCTTGCCAACCTaGCCATCTCTACACCCCTCT +
Preference number: 5 (lower is better)
Translates to: FLVSLAVPQSLVASPEAVCSLPT*PSLHPS
Trigger: AGAGGGGTGTAGAGATGGCAAGGTTGGCAAGGAACA...GACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS GCA 90 bp CATATGTGGGCACCACATCGATCGTGTTGTAGCCAAAGGTGCGCATaGAGAAGGTGCTGCTGTGGGTCAGGTGGCTGGGGTGGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: HMWAPHRSCCSQRCA*RRCCCGSGGWGGCC
Trigger: ACAGCAGCCACCCCAGCCACCTGACCCACAGCAGCACCTTCTGCATGCGCACCTTTGGCTACAACACGATCGATGTGGTGCCCACATATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS GCA 90 bp AGTGCTCATATGTGGGCACCACATCGATCGTGTTGTAGCCAAAGGTaGGCATGCAGAAGGTGCTGCTGTGGGTCAGGTGGCTGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: SAHMWAPHRSCCSQR*ACRRCCCGSGGWGG
Trigger: GCCACCCCAGCCACCTGACCCACAGCAGCACCTTCTGCATGCGCACCTTTGGCTACAACACGATCGATGTGGTGCCCACATATGAGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS CCA 90 bp ATCTTCCTCTTGTTCAGCCACTTGGTGTGCCCGTTGGCGATGAGCTaGAGCTCAGGCATCCTCTGCTTGTGGGGTCCGATGAGCACGTGG +
Preference number: 5 (lower is better)
Translates to: IFLLFSHLVCPLAMS*SSGILCLWGPMSTW
Trigger: CCACGTGCTCATCGGACCCCACAAGCAGAGGATGCCTGAGCTCCAGCTCATCGCCAACGGGCACACCAAGTGGCTGAACAAGAGGAAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS-3UTR CAA 90 bp GAGCCTGTAGGTCCTACAGGTGAGGCTCCCATTCTCCTATTGGAGGAAGCAGGGTCGATGGCAGTGCTCTaGCACCCTAGCTTTGGGGGC +
Preference number: 5 (lower is better)
Translates to: EPVGPTGEAPILLLEEAGSMAVL*HPSFGG
Trigger: GCCCCCAAAGCTAGGGTGCAAGAGCACTGCCATCGA...CCCTGCTTCCTCCAATAGGAGAATGGGAGCCTCACCTGTAGGACCTACAGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS CCA 90 bp TCCGGGGCTCACCAGGCTGGGTGCTGTTGGCATAGTGCTCATATGTaGGCACCACATCGATCGTGTTGTAGCCAAAGGTGCGCATGCAGA +
Preference number: 5 (lower is better)
Translates to: SGAHQAGCCWHSAHM*APHRSCCSQRCACR
Trigger: TCTGCATGCGCACCTTTGGCTACAACACGATCGATGTGGTGCCCACATATGAGCACTATGCCAACAGCACCCAGCCTGGTGAGCCCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS TCA 90 bp CACCTGCCGAAGGGACTTGACTCTGTTCTTCGTAATCTCCTCATCTaGGATCTTCCAGGGGCAGTCCCGCCGCATCTCGTTGACAGTGGC +
Preference number: 5 (lower is better)
Translates to: HLPKGLDSVLRNLLI*DLPGAVPPHLVDSG
Trigger: GCCACTGTCAACGAGATGCGGCGGGACTGCCCCTGGAAGATCTCAGATGAGGAGATTACGAAGAACAGAGTCAAGTCCCTTCGGCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
ENST00000569002.1
CDS GCA 90 bp GATGGCTATAGCAGGGTCCTTGAGGTCACCAGATATGTTGGCCCCTaGCAGGATGCCTGTGGCCGAGGGGAAGAAGATGGAGAACATTCC +
Preference number: 5 (lower is better)
Translates to: DGYSRVLEVTRYVGP*QDACGRGEEDGEHS
Trigger: GGAATGTTCTCCATCTTCTTCCCCTCGGCCACAGGCATCCTGGCAGGGGCCAACATATCTGGTGACCTCAAGGACCCTGCTATAGCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS CCA 90 bp GGGCTCCTTGTTCTTGCCATAGCCTTTGCCGAAGAAGCCGATCAGTaGGTACAGCTGGTCCTCGCAAAGGCACTGGAAGACTTTGGCAGC +
Preference number: 5 (lower is better)
Translates to: GLLVLAIAFAEEADQ*VQLVLAKALEDFGS
Trigger: GCTGCCAAAGTCTTCCAGTGCCTTTGCGAGGACCAGCTGTACCCACTGATCGGCTTCTTCGGCAAAGGCTATGGCAAGAACAAGGAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS-3UTR CAA 90 bp CACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCTCAGGCATCCTCTGCTaGTGGGGTCCGATGAGCACG +
Preference number: 5 (lower is better)
Translates to: HPGRSVETVKIHAQHWDSSGILC*WGPMST
Trigger: CGTGCTCATCGGACCCCACAAGCAGAGGATGCCTGA...GGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAAGCCCTGAGGCGGTCAGACAGTCATTCCTGACATCCTaGTCGTCTGTTCTTAACCAT +
Preference number: 5 (lower is better)
Translates to: VSLAVPQSLVASPEAVRQSFLTS*SSVLNH
Trigger: ATGGTTAAGAACAGACGACAAGGATGTCAGGAATGA...CTGTCTGACCGCCTCAGGGCTTGCTACGAGGGACTGGGGCACGGCCAAGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS TCA 90 bp TGTAGTCTTCCACTGTGGCCGGGTGAGCCGACTGCCAGTTCTTCTTaGACCCAACCACCAGAATGTTGGGCTTCATTCTCCCGAGACCTG +
Preference number: 5 (lower is better)
Translates to: CSLPLWPGEPTASSS*TQPPECWASFSRDL
Trigger: CAGGTCTCGGGAGAATGAAGCCCAACATTCTGGTGGTTGGGTTCAAGAAGAACTGGCAGTCGGCTCACCCGGCCACAGTGGAAGACTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS GCA 90 bp TGCCTGTGGCCGAGGGGAAGAAGATGGAGAACATTCCGAAGAAGGTaGCATCTGGACCCCGCCAGTCAGGCACCAAGTTCTGGACAAAAA +
Preference number: 5 (lower is better)
Translates to: CLWPRGRRWRTFRRR*HLDPASQAPSSGQK
Trigger: TTTTTGTCCAGAACTTGGTGCCTGACTGGCGGGGTCCAGATGGCACCTTCTTCGGAATGTTCTCCATCTTCTTCCCCTCGGCCACAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS CCA 90 bp GTAAAAGGTGAGCACGTTTTCCTGGTTTCCTCGGATCAGGATGACTaGAGGTCTGAGGTCCTGGGACAGGGTCTCCAGCCAGGCCATGTA +
Preference number: 5 (lower is better)
Translates to: VKGEHVFLVSSDQDD*RSEVLGQGLQPGHV
Trigger: TACATGGCCTGGCTGGAGACCCTGTCCCAGGACCTCAGACCTCCAGTCATCCTGATCCGAGGAAACCAGGAAAACGTGCTCACCTTTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000563352.1
ENST00000566786.5
CDS CCA 90 bp CATTCAGACGGAAGGGTGCAATCATGTCCTCAAACCTCTTGGTGCTaGGGACGAGAAAGTGGGTTGAGGCCGGCTGAGACGATAACCCCA +
Preference number: 5 (lower is better)
Translates to: HSDGRVQSCPQTSWC*GRESGLRPAETITP
Trigger: TGGGGTTATCGTCTCAGCCGGCCTCAACCCACTTTCTCGTCCCCAGCACCAAGAGGTTTGAGGACATGATTGCACCCTTCCGTCTGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569002.1
CDS-3UTR CAA 90 bp CACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCTGCGCCTGCATCATCTaGGACACGTTGAGTCCCTCC +
Preference number: 5 (lower is better)
Translates to: HPGRSVETVKIHAQHWDSCACII*DTLSPS
Trigger: GGAGGGACTCAACGTGTCCAAGATGATGCAGGCGCA...GGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GAGCCTGTAGGTCCTACAGGTGAGGCTCCCATTCTCCTATTGGAGGAAGCAGGGATGTCTATGGTCTTCTaGCCCTGCTCCGACTGGAAG +
Preference number: 5 (lower is better)
Translates to: EPVGPTGEAPILLLEEAGMSMVF*PCSDWK
Trigger: CTTCCAGTCGGAGCAGGGCAAGAAGACCATAGACAT...CCCTGCTTCCTCCAATAGGAGAATGGGAGCCTCACCTGTAGGACCTACAGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp AATGCAAGGCACAACAGAAAGGTGGCCATGCCTTTCAAATGTGTGGGTCCCCACGCCCGAGGGTTCTGGTaGATGTCAGGGAGGATGTGG +
Preference number: 5 (lower is better)
Translates to: NARHNRKVAMPFKCVGPHARGFW*MSGRMW
Trigger: CCACATCCTCCCTGACATCAACCAGAACCCTCGGGC...GTGGGGACCCACACATTTGAAAGGCATGGCCACCTTTCTGTTGTGCCTTGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp AATGCAAGGCACAACAGAAAGGTGGCCATGCCTTTCAAATGTGTGGGTCCCCACTGTAACCCCAGCACTTaGGGAGACCGAGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: NARHNRKVAMPFKCVGPHCNPST*GDRGGW
Trigger: CCACCCACCTCGGTCTCCCAAAGTGCTGGGGTTACA...GTGGGGACCCACACATTTGAAAGGCATGGCCACCTTTCTGTTGTGCCTTGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAATCAAAGACCCCTTATaGAAAGTGACGGGAGTGAGA +
Preference number: 5 (lower is better)
Translates to: GARELFLVSLAVPQSLVAIKDPL*KVTGVR
Trigger: TCTCACTCCCGTCACTTTCAATAAGGGGTCTTTGAT...TGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GAGCCTGTAGGTCCTACAGGTGAGGCTCCCATTCTCCTATTGGAGGAAGCAGGGTGTTCCTTGCCAACCTaGCCATCTCTACACCCCTCT +
Preference number: 5 (lower is better)
Translates to: EPVGPTGEAPILLLEEAGCSLPT*PSLHPS
Trigger: AGAGGGGTGTAGAGATGGCAAGGTTGGCAAGGAACA...CCCTGCTTCCTCCAATAGGAGAATGGGAGCCTCACCTGTAGGACCTACAGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCATCACCTTTACGCTTCTaGGTTATGTCTAGAGCTGCA +
Preference number: 5 (lower is better)
Translates to: GARELFLVSLAVPQSLVASPLRF*VMSRAA
Trigger: TGCAGCTCTAGACATAACCAAGAAGCGTAAAGGTGA...TGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS GCA 90 bp CATCATTCAGACGGAAGGGTGCAATCATGTCCTCAAACCTCTTGGTaGTGGGGACGAGAAAGTGGGTTGAGGCCGGCTGAGACGATAACC +
Preference number: 5 (lower is better)
Translates to: HHSDGRVQSCPQTSW*WGRESGLRPAETIT
Trigger: GGTTATCGTCTCAGCCGGCCTCAACCCACTTTCTCGTCCCCAGCACCAAGAGGTTTGAGGACATGATTGCACCCTTCCGTCTGAATGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569002.1
CDS CCA 90 bp AGCCATCATTCAGACGGAAGGGTGCAATCATGTCCTCAAACCTCTTaGTGCTGGGGACGAGAAAGTGGGTTGAGGCCGGCTGAGACGATA +
Preference number: 5 (lower is better)
Translates to: SHHSDGRVQSCPQTS*CWGRESGLRPAETI
Trigger: TATCGTCTCAGCCGGCCTCAACCCACTTTCTCGTCCCCAGCACCAAGAGGTTTGAGGACATGATTGCACCCTTCCGTCTGAATGATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569002.1
CDS-3UTR CAA 90 bp GGGAATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTGCCATGAGGGTCCCCTaGGGGATGGCTATAGCAGGG +
Preference number: 5 (lower is better)
Translates to: GNVSHGSGVQPDLEIYHLAMRVP*GMAIAG
Trigger: CCCTGCTATAGCCATCCCCAAGGGGACCCTCATGGC...AAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACATTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCAGGCACTGGAAGACTTaGGCAGCAGAGACAAGGCAG +
Preference number: 5 (lower is better)
Translates to: HPGRSVETVKIHAQHWDSRHWKT*AAETRQ
Trigger: CTGCCTTGTCTCTGCTGCCAAAGTCTTCCAGTGCCT...GGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CTTTCAAATGTGTGGGTCCCCACCCATGAGTGGATCCCAAAGTCATTTTATTGGTCCTTCACCAGGGCCTaGGGGTCCACTCTGGCGCTG +
Preference number: 5 (lower is better)
Translates to: LSNVWVPTHEWIPKSFYWSFTRA*GSTLAL
Trigger: CAGCGCCAGAGTGGACCCCAAGGCCCTGGTGAAGGA...CCAATAAAATGACTTTGGGATCCACTCATGGGTGGGGACCCACACATTTGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262502.5
ENST00000563236.6
CDS-3UTR CAA 90 bp GCTATTTCTCTAGCCTATAAACACAAGACCCAGGGAATGTGTCCCATGGAAGTGTCCTTCACCAGGGCCTaGGGGTCCACTCTGGCGCTG +
Preference number: 5 (lower is better)
Translates to: AISLAYKHKTQGMCPMEVSFTRA*GSTLAL
Trigger: CAGCGCCAGAGTGGACCCCAAGGCCCTGGTGAAGGA...CACTTCCATGGGACACATTCCCTGGGTCTTGTGTTTATAGGCTAGAGAAATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262502.5
ENST00000563236.6
CDS-3UTR CAA 90 bp AGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAGGGATGGCCCGAGGGTTCTGGTaGATGTCAGGGAGGATGTGG +
Preference number: 5 (lower is better)
Translates to: RGNQVPTYPTHSELWTGMARGFW*MSGRMW
Trigger: CCACATCCTCCCTGACATCAACCAGAACCCTCGGGC...CATCCCTGTCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp AGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAGGGATGTCCCGCCGCATCTCGTaGACAGTGGCCTCATCCTTG +
Preference number: 5 (lower is better)
Translates to: RGNQVPTYPTHSELWTGMSRRIS*TVASSL
Trigger: CAAGGATGAGGCCACTGTCAACGAGATGCGGCGGGA...CATCCCTGTCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GGAGCACGAGAGCTGTTCCTAGTCAGCTTGGCCGTGCCCCAGTCCCTCGTAGCAGGAGTCCAGCCAGATTaGGAAATCTACCATCTTTTT +
Preference number: 5 (lower is better)
Translates to: GARELFLVSLAVPQSLVAGVQPD*EIYHLF
Trigger: AAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCC...TGCTACGAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAGCTCTCGTGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGTCCTTCACCAGGGCCTaGGGGTCCAAAGCGCCAGAG +
Preference number: 5 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALSFTRA*GSKAPE
Trigger: CTCTGGCGCTTTGGACCCCAAGGCCCTGGTGAAGGA...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438926.6
CDS-3UTR CAA 90 bp AGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAGGGATGTGGGCTAGGCTTGGCTaGGACCTGCTCCTGCCTATC +
Preference number: 5 (lower is better)
Translates to: RGNQVPTYPTHSELWTGMWARLG*DLLLPI
Trigger: GATAGGCAGGAGCAGGTCCAAGCCAAGCCTAGCCCA...CATCCCTGTCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS TCA 90 bp TCATGTCCTCAAACCTCTTGGTGTGCTCAGCCCGAGGGTTCTGGTTaGTGTCAGGGAGGATGTGGACTTCATGGAATCCCAGTCGGAACT +
Preference number: 5 (lower is better)
Translates to: SCPQTSWCAQPEGSG*CQGGCGLHGIPVGT
Trigger: AGTTCCGACTGGGATTCCATGAAGTCCACATCCTCCCTGACATCAACCAGAACCCTCGGGCTGAGCACACCAAGAGGTTTGAGGACATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS GCA 90 bp GTTGACAGTGGCCTCATCCTTGAAGCCATCATTCAGACGGAAGGGTaGAATCATGTCCTCAAACCTCTTGGTGTGCTCAGCCCGAGGGTT +
Preference number: 5 (lower is better)
Translates to: VDSGLILEAIIQTEG*NHVLKPLGVLSPRV
Trigger: AACCCTCGGGCTGAGCACACCAAGAGGTTTGAGGACATGATTGCACCCTTCCGTCTGAATGATGGCTTCAAGGATGAGGCCACTGTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS CCA 90 bp TTGGTGTGCTCAGCCCGAGGGTTCTGGTTGATGTCAGGGAGGATGTaGACTTCATGGAATCCCAGTCGGAACTTGCTCAGCAGAGAAATG +
Preference number: 5 (lower is better)
Translates to: LVCSARGFWLMSGRM*TSWNPSRNLLSREM
Trigger: CATTTCTCTGCTGAGCAAGTTCCGACTGGGATTCCATGAAGTCCACATCCTCCCTGACATCAACCAGAACCCTCGGGCTGAGCACACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS-3UTR CAA 90 bp TGTGGACTAGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACCCCAGGCGTCTCTGTaGTGGGCAGTTCTGCCATTG +
Preference number: 5 (lower is better)
Translates to: CGLEAIKFQLIPHTQSCGPQASL*WAVLPL
Trigger: CAATGGCAGAACTGCCCACAACAGAGACGCCTGGGG...TCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCTAGTCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGAACAGCACCTGGGCCTaGGACTCCCACTCCATGCCA +
Preference number: 5 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALNSTWA*DSHSMP
Trigger: TGGCATGGAGTGGGAGTCCAAGGCCCAGGTGCTGTT...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GGGAATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTAACAGCACCTGGGCCTaGGACTCCCACTCCATGCCA +
Preference number: 5 (lower is better)
Translates to: GNVSHGSGVQPDLEIYHLNSTWA*DSHSMP
Trigger: TGGCATGGAGTGGGAGTCCAAGGCCCAGGTGCTGTT...AAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCGCCTTGATCTTCCTCTaGTTCAGCCACTTGGTGTGC +
Preference number: 5 (lower is better)
Translates to: HPGRSVETVKIHAQHWDSALIFL*FSHLVC
Trigger: GCACACCAAGTGGCTGAACAAGAGGAAGATCAAGGC...GGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGTGTAACCCCAGCACTTaGGGAGACCGAGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALCNPST*GDRGGW
Trigger: CCACCCACCTCGGTCTCCCAAAGTGCTGGGGTTACA...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS GCA 90 bp GTTGACAGTGGCCTCATCCTTGAAGCCATCATTCAGACGGAAGGGTaGAATCATGTCCTCAAACCTCTTGGTGCTGGGGACGAGAAAGTG +
Preference number: 5 (lower is better)
Translates to: VDSGLILEAIIQTEG*NHVLKPLGAGDEKV
Trigger: CACTTTCTCGTCCCCAGCACCAAGAGGTTTGAGGACATGATTGCACCCTTCCGTCTGAATGATGGCTTCAAGGATGAGGCCACTGTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569002.1
CDS CCA 90 bp AGCAGAGAAATGATCGCCTTTCTCTCCTGGTCCATCCTGTTAATCTaGCCGCCTACGAACACACGGATCTTGCATTTGCTCCACCTCCTC +
Preference number: 5 (lower is better)
Translates to: SREMIAFLSWSILLI*PPTNTRILHLLHLL
Trigger: GAGGAGGTGGAGCAAATGCAAGATCCGTGTGTTCGTAGGCGGCCAGATTAACAGGATGGACCAGGAGAGAAAGGCGATCATTTCTCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS CCA 90 bp TCAGCCCGAGGGTTCTGGTTGATGTCAGGGAGGATGTGGACTTCATaGAATCCCAGTCGGAACTTGCTCAGCAGAGAAATGATCGCCTTT +
Preference number: 5 (lower is better)
Translates to: SARGFWLMSGRMWTS*NPSRNLLSREMIAF
Trigger: AAAGGCGATCATTTCTCTGCTGAGCAAGTTCCGACTGGGATTCCATGAAGTCCACATCCTCCCTGACATCAACCAGAACCCTCGGGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS-3UTR CAA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGACGAATCATCACCCCCTaGACCCAGCCGAAGCGCACT +
Preference number: 5 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGRIITP*TQPKRT
Trigger: AGTGCGCTTCGGCTGGGTCAAGGGGGTGATGATTCG...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GGGAATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTGCCACACCCACGGCATaGGCGAAAGCGAAAATGAGG +
Preference number: 5 (lower is better)
Translates to: GNVSHGSGVQPDLEIYHLATPTA*AKAKMR
Trigger: CCTCATTTTCGCTTTCGCCAATGCCGTGGGTGTGGC...AAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGAGGTCACCAGATATGTaGGCCCCTGCCAGGATGCCT +
Preference number: 5 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALRSPDM*APARMP
Trigger: AGGCATCCTGGCAGGGGCCAACATATCTGGTGACCT...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp TTATTTCGAGTTAAGAATTATCCCAGAATCCAGCTCAATGGCTGGGAGGCAGGCTCAGGCATCCTCTGCTaGTGGGGTCCGATGAGCACG +
Preference number: 5 (lower is better)
Translates to: LFRVKNYPRIQLNGWEAGSGILC*WGPMST
Trigger: CGTGCTCATCGGACCCCACAAGCAGAGGATGCCTGA...GCCTGCCTCCCAGCCATTGAGCTGGATTCTGGGATAATTCTTAACTCGAAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGAGCCCGAGGGTTCTGGTaGATGTCAGGGAGGATGTGG +
Preference number: 5 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGARGFW*MSGRMW
Trigger: CCACATCCTCCCTGACATCAACCAGAACCCTCGGGC...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp AGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAGGGATGTGTCTGCCTTCCTGCTaGAGGAAGGAGTGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: RGNQVPTYPTHSELWTGMCLPSC*RKECRS
Trigger: TGACCTGCACTCCTTCCTCAAGCAGGAAGGCAGACA...CATCCCTGTCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp ATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGGTGAGATCGGTCTTGGGCTAGGCTaGGCTTGGACCTGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: MEVESSQIWKSTIFFGEIGLGLG*AWTCSC
Trigger: GCAGGAGCAGGTCCAAGCCAAGCCTAGCCCAAGACC...GATCTCACCGAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp TGTGGACTAGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGATCTTGCACCCTAGCTTaGGGGGCTCAAACACTGGGG +
Preference number: 5 (lower is better)
Translates to: CGLEAIKFQLIPHTQSCGSCTLA*GAQTLG
Trigger: CCCCAGTGTTTGAGCCCCCAAAGCTAGGGTGCAAGA...TCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCTAGTCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGATCGATGGCAGTGCTCTaGCACCCTAGCTTTGGGGGC +
Preference number: 5 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGSMAVL*HPSFGG
Trigger: GCCCCCAAAGCTAGGGTGCAAGAGCACTGCCATCGA...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp AAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTTGGGCAGTTCTGCCATaGTCGCCTGGGTGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: KDPLLKVTGVRSGSRNLPWAVLP*SPGCPG
Trigger: CCCTGGACACCCAGGCGACAATGGCAGAACTGCCCA...AGGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CAAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCAACAGCACCTGGGCCTaGGACTCCCACTCCATGCCA +
Preference number: 5 (lower is better)
Translates to: QRPLIESDGSEKWFKKFANSTWA*DSHSMP
Trigger: TGGCATGGAGTGGGAGTCCAAGGCCCAGGTGCTGTT...GGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp AAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTGCCATGAGGGTCCCCTaGGGGATGGCTATAGCAGGG +
Preference number: 5 (lower is better)
Translates to: KDPLLKVTGVRSGSRNLPAMRVP*GMAIAG
Trigger: CCCTGCTATAGCCATCCCCAAGGGGACCCTCATGGC...AGGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GCTATTTCTCTAGCCTATAAACACAAGACCCAGGGAATGTGTCCCATGGAAGTGCTCTTGTTCAGCCACTaGGTGTGCCCGTTGGCGATG +
Preference number: 5 (lower is better)
Translates to: AISLAYKHKTQGMCPMEVLLFSH*VCPLAM
Trigger: CATCGCCAACGGGCACACCAAGTGGCTGAACAAGAG...CACTTCCATGGGACACATTCCCTGGGTCTTGTGTTTATAGGCTAGAGAAATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGATGCGCCTGCATCATCTaGGACACGTTGAGTCCCTCC +
Preference number: 5 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGCACII*DTLSPS
Trigger: GGAGGGACTCAACGTGTCCAAGATGATGCAGGCGCA...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGACACGGATCTTGCATTaGCTCCACCTCCTCTTGCGG +
Preference number: 5 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALTRILH*LHLLLR
Trigger: CCGCAAGAGGAGGTGGAGCAAATGCAAGATCCGTGT...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CAAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTCCCGCCGCATCTCGTaGACAGTGGCCTCATCCTTG +
Preference number: 5 (lower is better)
Translates to: QRPLIESDGSEKWFKKFASRRIS*TVASSL
Trigger: CAAGGATGAGGCCACTGTCAACGAGATGCGGCGGGA...GGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CAAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTGTAACCCCAGCACTTaGGGAGACCGAGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: QRPLIESDGSEKWFKKFACNPST*GDRGGW
Trigger: CCACCCACCTCGGTCTCCCAAAGTGCTGGGGTTACA...GGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GCTATTTCTCTAGCCTATAAACACAAGACCCAGGGAATGTGTCCCATGGAAGTGAGTGGTTCAAGAAATTaGCCTGGGCCGGGCGCAGTG +
Preference number: 5 (lower is better)
Translates to: AISLAYKHKTQGMCPMEVSGSRN*PGPGAV
Trigger: CACTGCGCCCGGCCCAGGCAAATTTCTTGAACCACT...CACTTCCATGGGACACATTCCCTGGGTCTTGTGTTTATAGGCTAGAGAAATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GGGAATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTGTCTGCCTTCCTGCTaGAGGAAGGAGTGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: GNVSHGSGVQPDLEIYHLCLPSC*RKECRS
Trigger: TGACCTGCACTCCTTCCTCAAGCAGGAAGGCAGACA...AAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACATTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGATGCTCTTTCCATCTCTaGCAGGTGGCTCCTCCTCCC +
Preference number: 5 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGCSFHL*QVAPPP
Trigger: GGGAGGAGGAGCCACCTGCAAGAGATGGAAAGAGCA...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp TGTGGACTAGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAAGCCTTCTGGGCTTaGCAGTGGGATGACCTGAGA +
Preference number: 5 (lower is better)
Translates to: CGLEAIKFQLIPHTQSCGQAFWA*QWDDLR
Trigger: TCTCAGGTCATCCCACTGCAAAGCCCAGAAGGCTTG...TCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCTAGTCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCAATTTGCATACAAATCCCCAGGCGTCTCTGTaGTGGGCAGTTCTGCCATTG +
Preference number: 5 (lower is better)
Translates to: VETVKIHAQHWDSNLHTNPQASL*WAVLPL
Trigger: CAATGGCAGAACTGCCCACAACAGAGACGCCTGGGG...ATTTGTATGCAAATTGGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GAAAAGTCCCTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAACGAATCATCACCCCCTaGACCCAGCCGAAGCGCACT +
Preference number: 5 (lower is better)
Translates to: EKSLVQRTSEDIKDPLLKRIITP*TQPKRT
Trigger: AGTGCGCTTCGGCTGGGTCAAGGGGGTGATGATTCG...TTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAGGGACTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp ATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGCCACACCCACGGCATaGGCGAAAGCGAAAATGAGG +
Preference number: 5 (lower is better)
Translates to: MCPMEVESSQIWKSTIFFATPTA*AKAKMR
Trigger: CCTCATTTTCGCTTTCGCCAATGCCGTGGGTGTGGC...GAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CTTTCAAATGTGTGGGTCCCCACCCATGAGTGGATCCCAAAGTCATTTTATTGGAGGCACTGGAAGACTTaGGCAGCAGAGACAAGGCAG +
Preference number: 5 (lower is better)
Translates to: LSNVWVPTHEWIPKSFYWRHWKT*AAETRQ
Trigger: CTGCCTTGTCTCTGCTGCCAAAGTCTTCCAGTGCCT...CCAATAAAATGACTTTGGGATCCACTCATGGGTGGGGACCCACACATTTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp TCTACCATCTTTTTCGGTGAGATCATCAGATGCTGCCACTTAAAGTGCAACAGACACTTGGTGTGCCCGTaGGCGATGAGCTGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: STIFFGEIIRCCHLKCNRHLVCP*AMSWSS
Trigger: TGAGCTCCAGCTCATCGCCAACGGGCACACCAAGTG...TCTGTTGCACTTTAAGTGGCAGCATCTGATGATCTCACCGAAAAAGATGGTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp ATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGGTGAGATCCTCTTGTTCAGCCACTaGGTGTGCCCGTTGGCGATG +
Preference number: 5 (lower is better)
Translates to: MEVESSQIWKSTIFFGEILLFSH*VCPLAM
Trigger: CATCGCCAACGGGCACACCAAGTGGCTGAACAAGAG...GATCTCACCGAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GGGAATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTGCCTTGATCTTCCTCTaGTTCAGCCACTTGGTGTGC +
Preference number: 5 (lower is better)
Translates to: GNVSHGSGVQPDLEIYHLALIFL*FSHLVC
Trigger: GCACACCAAGTGGCTGAACAAGAGGAAGATCAAGGC...AAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp TGTGGACTAGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACCAACCACCAGAATGTaGGGCTTCATTCTCCCGAGA +
Preference number: 5 (lower is better)
Translates to: CGLEAIKFQLIPHTQSCGPTTRM*GFILPR
Trigger: TCTCGGGAGAATGAAGCCCAACATTCTGGTGGTTGG...TCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCTAGTCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGAATCATCTTGGACACGTaGAGTCCCTCCCGCATCCTC +
Preference number: 5 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGIILDT*SPSRIL
Trigger: GAGGATGCGGGAGGGACTCAACGTGTCCAAGATGAT...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp ATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGGTGAGATCTGCGCCTGCATCATCTaGGACACGTTGAGTCCCTCC +
Preference number: 5 (lower is better)
Translates to: MEVESSQIWKSTIFFGEICACII*DTLSPS
Trigger: GGAGGGACTCAACGTGTCCAAGATGATGCAGGCGCA...GATCTCACCGAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GCTATTTCTCTAGCCTATAAACACAAGACCCAGGGAATGTGTCCCATGGAAGTGACACGGATCTTGCATTaGCTCCACCTCCTCTTGCGG +
Preference number: 5 (lower is better)
Translates to: AISLAYKHKTQGMCPMEVTRILH*LHLLLR
Trigger: CCGCAAGAGGAGGTGGAGCAAATGCAAGATCCGTGT...CACTTCCATGGGACACATTCCCTGGGTCTTGTGTTTATAGGCTAGAGAAATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp TGTGGACTAGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGAACGAACACACGGATCTaGCATTTGCTCCACCTCCTC +
Preference number: 5 (lower is better)
Translates to: CGLEAIKFQLIPHTQSCGTNTRI*HLLHLL
Trigger: GAGGAGGTGGAGCAAATGCAAGATCCGTGTGTTCGT...TCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCTAGTCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp AAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTTCCCGCCGCATCTCGTaGACAGTGGCCTCATCCTTG +
Preference number: 5 (lower is better)
Translates to: KDPLLKVTGVRSGSRNLPSRRIS*TVASSL
Trigger: CAAGGATGAGGCCACTGTCAACGAGATGCGGCGGGA...AGGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GAGCCTGTAGGTCCTACAGGTGAGGCTCCCATTCTCCTATTGGAGGAAGCAGGGTATATATATATGTATTaGCCTGGCTGTGGAGGCTCA +
Preference number: 5 (lower is better)
Translates to: EPVGPTGEAPILLLEEAGYIYMY*PGCGGS
Trigger: TGAGCCTCCACAGCCAGGCAAATACATATATATATA...CCCTGCTTCCTCCAATAGGAGAATGGGAGCCTCACCTGTAGGACCTACAGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GGGAATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTAGACAGAAGAAATGCTaGAACCCGGGAGGAGGTTGC +
Preference number: 5 (lower is better)
Translates to: GNVSHGSGVQPDLEIYHLRQKKC*NPGGGC
Trigger: GCAACCTCCTCCCGGGTTCAAGCATTTCTTCTGTCT...AAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCATCAAAGACCCCTTATaGAAAGTGACGGGAGTGAGA +
Preference number: 5 (lower is better)
Translates to: HPGRSVETVKIHAQHWDSIKDPL*KVTGVR
Trigger: TCTCACTCCCGTCACTTTCAATAAGGGGTCTTTGAT...GGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CGCCCAGCATTGGGACTCCAATTTGCATACAAATCAAAGACTGAACTCTTAATTGGTCTTGGGCTAGGCTaGGCTTGGACCTGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: RPALGLQFAYKSKTELLIGLGLG*AWTCSC
Trigger: GCAGGAGCAGGTCCAAGCCAAGCCTAGCCCAAGACC...AATTAAGAGTTCAGTCTTTGATTTGTATGCAAATTGGAGTCCCAATGCTGGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CGCCCAGCATTGGGACTCCAATTTGCATACAAATCAAAGACTGAACTCTTAATTCTGTTCCTAGTCAGCTaGGCCGTGCCCCAGTCCCTC +
Preference number: 5 (lower is better)
Translates to: RPALGLQFAYKSKTELLILFLVS*AVPQSL
Trigger: GAGGGACTGGGGCACGGCCAAGCTGACTAGGAACAG...AATTAAGAGTTCAGTCTTTGATTTGTATGCAAATTGGAGTCCCAATGCTGGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CAAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCAGGTGTCTGCCTTCCTaGAGGAAGGAGTGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: QRPLIESDGSEKWFKKFARCLPS*RKECRS
Trigger: TGACCTGCACTCCTTCCTCAAGGAAGGCAGACACCT...GGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262502.5
CDS-3UTR CAA 90 bp TCTTTGAGGTTTGAAGAACCAGAAAATTGTTTTCTACGTGGCTCTAGAAAGGCCCGAATCATCACCCCCTaGACCCAGCCGAAGCGCACT +
Preference number: 5 (lower is better)
Translates to: SLRFEEPENCFLRGSRKARIITP*TQPKRT
Trigger: AGTGCGCTTCGGCTGGGTCAAGGGGGTGATGATTCG...GGCCTTTCTAGAGCCACGTAGAAAACAATTTTCTGGTTCTTCAAACCTCAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CAAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCCCACCTGACTTGACCTaGCCATTGGTGGAGATGGCT +
Preference number: 5 (lower is better)
Translates to: QRPLIESDGSEKWFKKFAPPDLT*PLVEMA
Trigger: AGCCATCTCCACCAATGGCAAGGTCAAGTCAGGTGG...GGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GAAAAGTCCCTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAAGGTCACCAGATATGTaGGCCCCTGCCAGGATGCCT +
Preference number: 5 (lower is better)
Translates to: EKSLVQRTSEDIKDPLLKRSPDM*APARMP
Trigger: AGGCATCCTGGCAGGGGCCAACATATCTGGTGACCT...TTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAGGGACTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp AAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTAGGTCACCAGATATGTaGGCCCCTGCCAGGATGCCT +
Preference number: 5 (lower is better)
Translates to: KDPLLKVTGVRSGSRNLPRSPDM*APARMP
Trigger: AGGCATCCTGGCAGGGGCCAACATATCTGGTGACCT...AGGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp ATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGGTGAGATCAGGCACTGGAAGACTTaGGCAGCAGAGACAAGGCAG +
Preference number: 5 (lower is better)
Translates to: MEVESSQIWKSTIFFGEIRHWKT*AAETRQ
Trigger: CTGCCTTGTCTCTGCTGCCAAAGTCTTCCAGTGCCT...GATCTCACCGAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CGCCCAGCATTGGGACTCCAATTTGCATACAAATCAAAGACTGAACTCTTAATTCACTTGGTGTGCCCGTaGGCGATGAGCTGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: RPALGLQFAYKSKTELLIHLVCP*AMSWSS
Trigger: TGAGCTCCAGCTCATCGCCAACGGGCACACCAAGTG...AATTAAGAGTTCAGTCTTTGATTTGTATGCAAATTGGAGTCCCAATGCTGGGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GCTATTTCTCTAGCCTATAAACACAAGACCCAGGGAATGTGTCCCATGGAAGTGCCAACCACCAGAATGTaGGGCTTCATTCTCCCGAGA +
Preference number: 5 (lower is better)
Translates to: AISLAYKHKTQGMCPMEVPTTRM*GFILPR
Trigger: TCTCGGGAGAATGAAGCCCAACATTCTGGTGGTTGG...CACTTCCATGGGACACATTCCCTGGGTCTTGTGTTTATAGGCTAGAGAAATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp AGAGGCAATCAAGTTCCAACTTATCCCACACACTCAGAGCTGTGGACAGGGATGAATCCCAGTCGGAACTaGCTCAGCAGAGAAATGATC +
Preference number: 5 (lower is better)
Translates to: RGNQVPTYPTHSELWTGMNPSRN*LSREMI
Trigger: GATCATTTCTCTGCTGAGCAAGTTCCGACTGGGATT...CATCCCTGTCCACAGCTCTGAGTGTGTGGGATAAGTTGGAACTTGATTGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGACCTGCCGAAGGGACTaGACTCTGTTCTTCGTAATC +
Preference number: 5 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALTCRRD*TLFFVI
Trigger: GATTACGAAGAACAGAGTCAAGTCCCTTCGGCAGGT...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGATTCACGCCCAGCATaGGGACTCCAATTTGCATAC +
Preference number: 5 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALDSRPA*GLQFAY
Trigger: GTATGCAAATTGGAGTCCCAATGCTGGGCGTGAATC...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGAGCTCCCATTCTCCTATaGGAGGAAGCAGGGCATGAT +
Preference number: 5 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGAPILL*EEAGHD
Trigger: ATCATGCCCTGCTTCCTCCAATAGGAGAATGGGAGC...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp TCTACCATCTTTTTCGGTGAGATCATCAGATGCTGCCACTTAAAGTGCAACAGAAGTGGTTCAAGAAATTaGCCTGGGCCGGGCGCAGTG +
Preference number: 5 (lower is better)
Translates to: STIFFGEIIRCCHLKCNRSGSRN*PGPGAV
Trigger: CACTGCGCCCGGCCCAGGCAAATTTCTTGAACCACT...TCTGTTGCACTTTAAGTGGCAGCATCTGATGATCTCACCGAAAAAGATGGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp AAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTAGTGGTTCAAGAAATTaGCCTGGGCCGGGCGCAGTG +
Preference number: 5 (lower is better)
Translates to: KDPLLKVTGVRSGSRNLPSGSRN*PGPGAV
Trigger: CACTGCGCCCGGCCCAGGCAAATTTCTTGAACCACT...AGGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CCTTTAAAAGGAATAGGATGCTTTAGAGAGTTTTCCTTGCAGCTCCATCTGCTATGGGCTAGGCTTGGCTaGGACCTGCTCCTGCCTATC +
Preference number: 5 (lower is better)
Translates to: PLKGIGCFREFSLQLHLLWARLG*DLLLPI
Trigger: GATAGGCAGGAGCAGGTCCAAGCCAAGCCTAGCCCA...TAGCAGATGGAGCTGCAAGGAAAACTCTCTAAAGCATCCTATTCCTTTTAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS CCA 90 bp GAGTTGATGTCCCTCTTGAAAGAGCTGGGTTCCCTCTTTGCCAAGTaGAATTTGGTAGGAAAAGGCAGCCAACAGGAAAAAGCAATGGCA +
Preference number: 5 (lower is better)
Translates to: ELMSLLKELGSLFAK*NLVGKGSQQEKAMA
Trigger: TGCCATTGCTTTTTCCTGTTGGCTGCCTTTTCCTACCAAATTCCACTTGGCAAAGAGGGAACCCAGCTCTTTCAAGAGGGACATCAACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569002.1
CDS-3UTR CAA 90 bp GAAAAGTCCCTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAACCACCTGACTTGACCTaGCCATTGGTGGAGATGGCT +
Preference number: 5 (lower is better)
Translates to: EKSLVQRTSEDIKDPLLKPPDLT*PLVEMA
Trigger: AGCCATCTCCACCAATGGCAAGGTCAAGTCAGGTGG...TTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAGGGACTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CTTTCAAATGTGTGGGTCCCCACCCATGAGTGGATCCCAAAGTCATTTTATTGGGCTATAGCAGGGTCCTaGAGGTCACCAGATATGTTG +
Preference number: 5 (lower is better)
Translates to: LSNVWVPTHEWIPKSFYWAIAGS*RSPDML
Trigger: CAACATATCTGGTGACCTCAAGGACCCTGCTATAGC...CCAATAAAATGACTTTGGGATCCACTCATGGGTGGGGACCCACACATTTGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CAAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCATGGGGGCTATGGTGTaGAGCTCAGCGATGATGATG +
Preference number: 5 (lower is better)
Translates to: QRPLIESDGSEKWFKKFAMGAMV*SSAMMM
Trigger: CATCATCATCGCTGAGCTCAACACCATAGCCCCCAT...GGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp TCTTTGAGGTTTGAAGAACCAGAAAATTGTTTTCTACGTGGCTCTAGAAAGGCCCTCTTGTTCAGCCACTaGGTGTGCCCGTTGGCGATG +
Preference number: 5 (lower is better)
Translates to: SLRFEEPENCFLRGSRKALLFSH*VCPLAM
Trigger: CATCGCCAACGGGCACACCAAGTGGCTGAACAAGAG...GGCCTTTCTAGAGCCACGTAGAAAACAATTTTCTGGTTCTTCAAACCTCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp TCTACCATCTTTTTCGGTGAGATCATCAGATGCTGCCACTTAAAGTGCAACAGAATCATCTTGGACACGTaGAGTCCCTCCCGCATCCTC +
Preference number: 5 (lower is better)
Translates to: STIFFGEIIRCCHLKCNRIILDT*SPSRIL
Trigger: GAGGATGCGGGAGGGACTCAACGTGTCCAAGATGAT...TCTGTTGCACTTTAAGTGGCAGCATCTGATGATCTCACCGAAAAAGATGGTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCAATTTGCATACAAATACACGGATCTTGCATTaGCTCCACCTCCTCTTGCGG +
Preference number: 5 (lower is better)
Translates to: VETVKIHAQHWDSNLHTNTRILH*LHLLLR
Trigger: CCGCAAGAGGAGGTGGAGCAAATGCAAGATCCGTGT...ATTTGTATGCAAATTGGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGAACCTGCCGAAGGGACTaGACTCTGTTCTTCGTAATC +
Preference number: 5 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGTCRRD*TLFFVI
Trigger: GATTACGAAGAACAGAGTCAAGTCCCTTCGGCAGGT...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GCTATTTCTCTAGCCTATAAACACAAGACCCAGGGAATGTGTCCCATGGAAGTGACCTGCCGAAGGGACTaGACTCTGTTCTTCGTAATC +
Preference number: 5 (lower is better)
Translates to: AISLAYKHKTQGMCPMEVTCRRD*TLFFVI
Trigger: GATTACGAAGAACAGAGTCAAGTCCCTTCGGCAGGT...CACTTCCATGGGACACATTCCCTGGGTCTTGTGTTTATAGGCTAGAGAAATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAGTGACGGGAGATTCACGCCCAGCATaGGGACTCCAATTTGCATAC +
Preference number: 5 (lower is better)
Translates to: LVQRTSEDIKDPLLKVTGDSRPA*GLQFAY
Trigger: GTATGCAAATTGGAGTCCCAATGCTGGGCGTGAATC...TCCCGTCACTTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp ATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGCTCCCATTCTCCTATaGGAGGAAGCAGGGCATGAT +
Preference number: 5 (lower is better)
Translates to: MCPMEVESSQIWKSTIFFAPILL*EEAGHD
Trigger: ATCATGCCCTGCTTCCTCCAATAGGAGAATGGGAGC...GAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp ATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGGTGAGATCGCTCCCATTCTCCTATaGGAGGAAGCAGGGCATGAT +
Preference number: 5 (lower is better)
Translates to: MEVESSQIWKSTIFFGEIAPILL*EEAGHD
Trigger: ATCATGCCCTGCTTCCTCCAATAGGAGAATGGGAGC...GATCTCACCGAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGCCTGAAATCTTACCCTaGCCACTAGACTCCTTCAAC +
Preference number: 5 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALPEILP*PLDSFN
Trigger: GTTGAAGGAGTCTAGTGGCAAGGGTAAGATTTCAGG...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp TCTTTGAGGTTTGAAGAACCAGAAAATTGTTTTCTACGTGGCTCTAGAAAGGCCTGCTCTTTCCATCTCTaGCAGGTGGCTCCTCCTCCC +
Preference number: 5 (lower is better)
Translates to: SLRFEEPENCFLRGSRKACSFHL*QVAPPP
Trigger: GGGAGGAGGAGCCACCTGCAAGAGATGGAAAGAGCA...GGCCTTTCTAGAGCCACGTAGAAAACAATTTTCTGGTTCTTCAAACCTCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GAAAAGTCCCTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAATGGGGGCTATGGTGTaGAGCTCAGCGATGATGATG +
Preference number: 5 (lower is better)
Translates to: EKSLVQRTSEDIKDPLLKMGAMV*SSAMMM
Trigger: CATCATCATCGCTGAGCTCAACACCATAGCCCCCAT...TTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAGGGACTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp AAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTATGGGGGCTATGGTGTaGAGCTCAGCGATGATGATG +
Preference number: 5 (lower is better)
Translates to: KDPLLKVTGVRSGSRNLPMGAMV*SSAMMM
Trigger: CATCATCATCGCTGAGCTCAACACCATAGCCCCCAT...AGGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp AAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTGCCTTGATCTTCCTCTaGTTCAGCCACTTGGTGTGC +
Preference number: 5 (lower is better)
Translates to: KDPLLKVTGVRSGSRNLPALIFL*FSHLVC
Trigger: GCACACCAAGTGGCTGAACAAGAGGAAGATCAAGGC...AGGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp TCTACCATCTTTTTCGGTGAGATCATCAGATGCTGCCACTTAAAGTGCAACAGACCAACCACCAGAATGTaGGGCTTCATTCTCCCGAGA +
Preference number: 5 (lower is better)
Translates to: STIFFGEIIRCCHLKCNRPTTRM*GFILPR
Trigger: TCTCGGGAGAATGAAGCCCAACATTCTGGTGGTTGG...TCTGTTGCACTTTAAGTGGCAGCATCTGATGATCTCACCGAAAAAGATGGTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp ATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCGGTGAGATCGACTGCCAGTTCTTCTaGAACCCAACCACCAGAATG +
Preference number: 5 (lower is better)
Translates to: MEVESSQIWKSTIFFGEIDCQFF*NPTTRM
Trigger: CATTCTGGTGGTTGGGTTCAAGAAGAACTGGCAGTC...GATCTCACCGAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CTTTCAAATGTGTGGGTCCCCACCCATGAGTGGATCCCAAAGTCATTTTATTGGAATCCCAGTCGGAACTaGCTCAGCAGAGAAATGATC +
Preference number: 5 (lower is better)
Translates to: LSNVWVPTHEWIPKSFYWNPSRN*LSREMI
Trigger: GATCATTTCTCTGCTGAGCAAGTTCCGACTGGGATT...CCAATAAAATGACTTTGGGATCCACTCATGGGTGGGGACCCACACATTTGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp TTATTTCGAGTTAAGAATTATCCCAGAATCCAGCTCAATGGCTGGGAGGCAGGCAATCCCAGTCGGAACTaGCTCAGCAGAGAAATGATC +
Preference number: 5 (lower is better)
Translates to: LFRVKNYPRIQLNGWEAGNPSRN*LSREMI
Trigger: GATCATTTCTCTGCTGAGCAAGTTCCGACTGGGATT...GCCTGCCTCCCAGCCATTGAGCTGGATTCTGGGATAATTCTTAACTCGAAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CAAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCGATTCACGCCCAGCATaGGGACTCCAATTTGCATAC +
Preference number: 5 (lower is better)
Translates to: QRPLIESDGSEKWFKKFADSRPA*GLQFAY
Trigger: GTATGCAAATTGGAGTCCCAATGCTGGGCGTGAATC...GGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GAAAAGTCCCTCGTCCAAAGAACCAGTGAAGACATCAAAGACCCCTTATTGAAAAGACAGAAGAAATGCTaGAACCCGGGAGGAGGTTGC +
Preference number: 5 (lower is better)
Translates to: EKSLVQRTSEDIKDPLLKRQKKC*NPGGGC
Trigger: GCAACCTCCTCCCGGGTTCAAGCATTTCTTCTGTCT...TTTCAATAAGGGGTCTTTGATGTCTTCACTGGTTCTTTGGACGAGGGACTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CGCCCAGCATTGGGACTCCAATTTGCATACAAATCAAAGACTGAACTCTTAATTCAAGCCTTCTGGGCTTaGCAGTGGGATGACCTGAGA +
Preference number: 5 (lower is better)
Translates to: RPALGLQFAYKSKTELLIQAFWA*QWDDLR
Trigger: TCTCAGGTCATCCCACTGCAAAGCCCAGAAGGCTTG...AATTAAGAGTTCAGTCTTTGATTTGTATGCAAATTGGAGTCCCAATGCTGGGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GGGAATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTGGACCAAGGACTCTTaGAGGTTTGAAGAACCAGAA +
Preference number: 5 (lower is better)
Translates to: GNVSHGSGVQPDLEIYHLWTKDS*RFEEPE
Trigger: TTCTGGTTCTTCAAACCTCAAAGAGTCCTTGGTCCA...AAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACATTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp AAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTGCTATAGCAGGGTCCTaGAGGTCACCAGATATGTTG +
Preference number: 5 (lower is better)
Translates to: KDPLLKVTGVRSGSRNLPAIAGS*RSPDML
Trigger: CAACATATCTGGTGACCTCAAGGACCCTGCTATAGC...AGGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp AAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTGACTGCCAGTTCTTCTaGAACCCAACCACCAGAATG +
Preference number: 5 (lower is better)
Translates to: KDPLLKVTGVRSGSRNLPDCQFF*NPTTRM
Trigger: CATTCTGGTGGTTGGGTTCAAGAAGAACTGGCAGTC...AGGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp TCTACCATCTTTTTCGGTGAGATCATCAGATGCTGCCACTTAAAGTGCAACAGAGACTGCCAGTTCTTCTaGAACCCAACCACCAGAATG +
Preference number: 5 (lower is better)
Translates to: STIFFGEIIRCCHLKCNRDCQFF*NPTTRM
Trigger: CATTCTGGTGGTTGGGTTCAAGAAGAACTGGCAGTC...TCTGTTGCACTTTAAGTGGCAGCATCTGATGATCTCACCGAAAAAGATGGTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GAACTTTCACCCAGGAAGGTCTGTAGAAACTGTCAAGATTCACGCCCAGCATTGGGAGTCCAGCCAGATTaGGAAATCTACCATCTTTTT +
Preference number: 5 (lower is better)
Translates to: ELSPRKVCRNCQDSRPALGVQPD*EIYHLF
Trigger: AAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCC...CAATGCTGGGCGTGAATCTTGACAGTTTCTACAGACCTTCCTGGGTGAAAGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CGCCCAGCATTGGGACTCCAATTTGCATACAAATCAAAGACTGAACTCTTAATTAGACAGAAGAAATGCTaGAACCCGGGAGGAGGTTGC +
Preference number: 5 (lower is better)
Translates to: RPALGLQFAYKSKTELLIRQKKC*NPGGGC
Trigger: GCAACCTCCTCCCGGGTTCAAGCATTTCTTCTGTCT...AATTAAGAGTTCAGTCTTTGATTTGTATGCAAATTGGAGTCCCAATGCTGGGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GCTATTTCTCTAGCCTATAAACACAAGACCCAGGGAATGTGTCCCATGGAAGTGTGGACCAAGGACTCTTaGAGGTTTGAAGAACCAGAA +
Preference number: 5 (lower is better)
Translates to: AISLAYKHKTQGMCPMEVWTKDS*RFEEPE
Trigger: TTCTGGTTCTTCAAACCTCAAAGAGTCCTTGGTCCA...CACTTCCATGGGACACATTCCCTGGGTCTTGTGTTTATAGGCTAGAGAAATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CGCCCAGCATTGGGACTCCAATTTGCATACAAATCAAAGACTGAACTCTTAATTGCTATAGCAGGGTCCTaGAGGTCACCAGATATGTTG +
Preference number: 5 (lower is better)
Translates to: RPALGLQFAYKSKTELLIAIAGS*RSPDML
Trigger: CAACATATCTGGTGACCTCAAGGACCCTGCTATAGC...AATTAAGAGTTCAGTCTTTGATTTGTATGCAAATTGGAGTCCCAATGCTGGGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp ATGTGTCCCATGGAAGTGGAGTCCAGCCAGATTTGGAAATCTACCATCTTTTTCATCAAAGACCCCTTATaGAAAGTGACGGGAGTGAGA +
Preference number: 5 (lower is better)
Translates to: MCPMEVESSQIWKSTIFFIKDPL*KVTGVR
Trigger: TCTCACTCCCGTCACTTTCAATAAGGGGTCTTTGAT...GAAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCCACTTCCATGGGACACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GTAGAAACTGTCAAGATTCACGCCCAGCATTGGGACTCCAATTTGCATACAAATCCTGAAATCTTACCCTaGCCACTAGACTCCTTCAAC +
Preference number: 5 (lower is better)
Translates to: VETVKIHAQHWDSNLHTNPEILP*PLDSFN
Trigger: GTTGAAGGAGTCTAGTGGCAAGGGTAAGATTTCAGG...ATTTGTATGCAAATTGGAGTCCCAATGCTGGGCGTGAATCTTGACAGTTTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp TTATTTCGAGTTAAGAATTATCCCAGAATCCAGCTCAATGGCTGGGAGGCAGGCTCATTCCTGACATCCTaGTCGTCTGTTCTTAACCAT +
Preference number: 5 (lower is better)
Translates to: LFRVKNYPRIQLNGWEAGSFLTS*SSVLNH
Trigger: ATGGTTAAGAACAGACGACAAGGATGTCAGGAATGA...GCCTGCCTCCCAGCCATTGAGCTGGATTCTGGGATAATTCTTAACTCGAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CAAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCGGAGTCCAGCCAGATTaGGAAATCTACCATCTTTTT +
Preference number: 5 (lower is better)
Translates to: QRPLIESDGSEKWFKKFAGVQPD*EIYHLF
Trigger: AAAAAGATGGTAGATTTCCAAATCTGGCTGGACTCC...GGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp GCTATTTCTCTAGCCTATAAACACAAGACCCAGGGAATGTGTCCCATGGAAGTGTTTAGAGAGTTTTCCTaGCAGCTCCATCTGCTATTT +
Preference number: 5 (lower is better)
Translates to: AISLAYKHKTQGMCPMEVFREFS*QLHLLF
Trigger: AAATAGCAGATGGAGCTGCAAGGAAAACTCTCTAAA...CACTTCCATGGGACACATTCCCTGGGTCTTGTGTTTATAGGCTAGAGAAATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CAAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTTTAGAGAGTTTTCCTaGCAGCTCCATCTGCTATTT +
Preference number: 5 (lower is better)
Translates to: QRPLIESDGSEKWFKKFAFREFS*QLHLLF
Trigger: AAATAGCAGATGGAGCTGCAAGGAAAACTCTCTAAA...GGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CGCCCAGCATTGGGACTCCAATTTGCATACAAATCAAAGACTGAACTCTTAATTTCACCTTTACGCTTCTaGGTTATGTCTAGAGCTGCA +
Preference number: 5 (lower is better)
Translates to: RPALGLQFAYKSKTELLISPLRF*VMSRAA
Trigger: TGCAGCTCTAGACATAACCAAGAAGCGTAAAGGTGA...AATTAAGAGTTCAGTCTTTGATTTGTATGCAAATTGGAGTCCCAATGCTGGGCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp TCTACCATCTTTTTCGGTGAGATCATCAGATGCTGCCACTTAAAGTGCAACAGATTTAGAGAGTTTTCCTaGCAGCTCCATCTGCTATTT +
Preference number: 5 (lower is better)
Translates to: STIFFGEIIRCCHLKCNRFREFS*QLHLLF
Trigger: AAATAGCAGATGGAGCTGCAAGGAAAACTCTCTAAA...TCTGTTGCACTTTAAGTGGCAGCATCTGATGATCTCACCGAAAAAGATGGTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp AAAGACCCCTTATTGAAAGTGACGGGAGTGAGAAGTGGTTCAAGAAATTTGCCTTATATATATATGTATTaGCCTGGCTGTGGAGGCTCA +
Preference number: 5 (lower is better)
Translates to: KDPLLKVTGVRSGSRNLPYIYMY*PGCGGS
Trigger: TGAGCCTCCACAGCCAGGCAAATACATATATATATA...AGGCAAATTTCTTGAACCACTTCTCACTCCCGTCACTTTCAATAAGGGGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS-3UTR CAA 90 bp CGCCCAGCATTGGGACTCCAATTTGCATACAAATCAAAGACTGAACTCTTAATTTATATATATATGTATTaGCCTGGCTGTGGAGGCTCA +
Preference number: 5 (lower is better)
Translates to: RPALGLQFAYKSKTELLIYIYMY*PGCGGS
Trigger: TGAGCCTCCACAGCCAGGCAAATACATATATATATA...AATTAAGAGTTCAGTCTTTGATTTGTATGCAAATTGGAGTCCCAATGCTGGGCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
CDS GCA 72 bp TCACTGATGCCTGGGACACGTGAGGCCCTCGACCCCTaGCAGCTGGAGCTCAGGTGTGGGGCGGGCTCAGGC +
Preference number: 6 (lower is better)
Translates to: SLMPGTREALDP*QLELRCGAGSG
Trigger: GCCTGAGCCCGCCCCACACCTGAGCTCCAGCTGGCAGGGGTCGAGGGCCTCACGTGTCCCAGGCATCAGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569002.1
CDS CCA 72 bp CCTGCCTCGCCCTCCACCAGCCCATCAGTCATCTCGTaGCTGGGCCGGCTGTCAAAGGCCAGGGCATGCAGG +
Preference number: 6 (lower is better)
Translates to: PASPSTSPSVIS*LGRLSKARACR
Trigger: CCTGCATGCCCTGGCCTTTGACAGCCGGCCCAGCCACGAGATGACTGATGGGCTGGTGGAGGGCGAGGCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS CCA 72 bp GGGCCTTGGGGTCCAAAGCGCCAGAGACTGATGGCCTaGCACCTCTGGCGCTGGCTTCCTTCCCGTCCTCCG +
Preference number: 6 (lower is better)
Translates to: GPWGPKRQRLMA*HLWRWLPSRPP
Trigger: CGGAGGACGGGAAGGAAGCCAGCGCCAGAGGTGCCAGGCCATCAGTCTCTGGCGCTTTGGACCCCAAGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000566786.5
CDS GCA 72 bp TGCCCCATACTCCTGGAGCAGGTCCCGCACGGTCTCTaGAAAGCCCACCGTGTGCATGGCCACACCCACGGC +
Preference number: 6 (lower is better)
Translates to: CPILLEQVPHGL*KAHRVHGHTHG
Trigger: GCCGTGGGTGTGGCCATGCACACGGTGGGCTTTGCAGAGACCGTGCGGGACCTGCTCCAGGAGTATGGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS CCA 72 bp CCTCGCCCTCCACCAGCCCATCAGTCATCTCGTGGCTaGGCCGGCTGTCAAAGGCCAGGGCATGCAGGTGTC +
Preference number: 6 (lower is better)
Translates to: PRPPPAHQSSRG*AGCQRPGHAGV
Trigger: GACACCTGCATGCCCTGGCCTTTGACAGCCGGCCCAGCCACGAGATGACTGATGGGCTGGTGGAGGGCGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS TCA 72 bp CTTCACCAGGGCCTTGGGGTCCAAAGCGCCAGAGACTaGTGGCCTGGCACCTCTGGCGCTGGCTTCCTTCCC +
Preference number: 6 (lower is better)
Translates to: LHQGLGVQSARD*WPGTSGAGFLP
Trigger: GGGAAGGAAGCCAGCGCCAGAGGTGCCAGGCCATCAGTCTCTGGCGCTTTGGACCCCAAGGCCCTGGTGAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000566786.5
CDS TCA 72 bp CAATGGCAAGGGGAGGTCACTGATGCCTGGGACACGTaGGGCCCTCGACCCCTGCCAGCTGGAGCTCAGGTG +
Preference number: 6 (lower is better)
Translates to: QWQGEVTDAWDT*GPRPLPAGAQV
Trigger: CACCTGAGCTCCAGCTGGCAGGGGTCGAGGGCCTCACGTGTCCCAGGCATCAGTGACCTCCCCTTGCCATTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569002.1
CDS GCA 72 bp CACTGGCTCCTCGGGGTTCTTCTCGCTGCTGGTGCCTaGCTCGCCCTCCACCAGCCCATCAGTCATCTCGTG +
Preference number: 6 (lower is better)
Translates to: HWLLGVLLAAGA*LALHQPISHLV
Trigger: CACGAGATGACTGATGGGCTGGTGGAGGGCGAGGCAGGCACCAGCAGCGAGAAGAACCCCGAGGAGCCAGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS CCA 72 bp CGCTGCACAAAGTGGCGTCCCCAGGCGTCTCTGTTGTaGGCAGTTCTGCCATTGTCGCCTGGGTGTCCAGGG +
Preference number: 6 (lower is better)
Translates to: RCTKWRPQASLL*AVLPLSPGCPG
Trigger: CCCTGGACACCCAGGCGACAATGGCAGAACTGCCCACAACAGAGACGCCTGGGGACGCCACTTTGTGCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS CAA 72 bp GCCCGCTGCACAAAGTGGCGTCCCCAGGCGTCTCTGTaGTGGGCAGTTCTGCCATTGTCGCCTGGGTGTCCA +
Preference number: 6 (lower is better)
Translates to: ARCTKWRPQASL*WAVLPLSPGCP
Trigger: TGGACACCCAGGCGACAATGGCAGAACTGCCCACAACAGAGACGCCTGGGGACGCCACTTTGTGCAGCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS CAA 90 bp ACGGTCTCTGCAAAGCCCACCGTGTGCATGGCCACACCCACGGCATaGGCGAAAGCGAAAATGAGGCCGATGGAGCCCCCAAGCTCTGGG +
Preference number: 6 (lower is better)
Translates to: TVSAKPTVCMATPTA*AKAKMRPMEPPSSG
Trigger: CCCAGAGCTTGGGGGCTCCATCGGCCTCATTTTCGCTTTCGCCAATGCCGTGGGTGTGGCCATGCACACGGTGGGCTTTGCAGAGACCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS GCA 72 bp GTGTGGGCCGGACCTTCCGGGGCTCACCAGGCTGGGTaGTGTTGGCATAGTGCTCATATGTGGGCACCACAT +
Preference number: 6 (lower is better)
Translates to: VWAGPSGAHQAG*CWHSAHMWAPH
Trigger: ATGTGGTGCCCACATATGAGCACTATGCCAACAGCACCCAGCCTGGTGAGCCCCGGAAGGTCCGGCCCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS GCA 72 bp AGCAGGTCCCGCACGGTCTCTGCAAAGCCCACCGTGTaGATGGCCACACCCACGGCATTGGCGAAAGCGAAA +
Preference number: 6 (lower is better)
Translates to: SRSRTVSAKPTV*MATPTALAKAK
Trigger: TTTCGCTTTCGCCAATGCCGTGGGTGTGGCCATGCACACGGTGGGCTTTGCAGAGACCGTGCGGGACCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS GCA 72 bp TGCCCGTTGGCGATGAGCTGGAGCTCAGGCATCCTCTaGTTGTGGGGTCCGATGAGCACGTGGCCACAGATC +
Preference number: 6 (lower is better)
Translates to: CPLAMSWSSGIL*LWGPMSTWPQI
Trigger: GATCTGTGGCCACGTGCTCATCGGACCCCACAAGCAGAGGATGCCTGAGCTCCAGCTCATCGCCAACGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS CCA 72 bp GGCACCTCTGGCGCTGGCTTCCTTCCCGTCCTCCGCTaGGTCAAACACGGGGTTAATGTGCGCCTGCATCAT +
Preference number: 6 (lower is better)
Translates to: GTSGAGFLPVLR*VKHGVNVRLHH
Trigger: ATGATGCAGGCGCACATTAACCCCGTGTTTGACCCAGCGGAGGACGGGAAGGAAGCCAGCGCCAGAGGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438926.6
ENST00000566786.5
CDS CAA 72 bp GCAAAGCCCACCGTGTGCATGGCCACACCCACGGCATaGGCGAAAGCGAAAATGAGGCCGATGGAGCCCCCA +
Preference number: 6 (lower is better)
Translates to: AKPTVCMATPTA*AKAKMRPMEPP
Trigger: TGGGGGCTCCATCGGCCTCATTTTCGCTTTCGCCAATGCCGTGGGTGTGGCCATGCACACGGTGGGCTTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS CCA 72 bp GTCCACTCTGGCGCTGGCTTCCTTCCCGTCCTCCGCTaGGTCAAACACGGGGTTAATGTGCGCCTGCATCAT +
Preference number: 6 (lower is better)
Translates to: VHSGAGFLPVLR*VKHGVNVRLHH
Trigger: ATGATGCAGGCGCACATTAACCCCGTGTTTGACCCAGCGGAGGACGGGAAGGAAGCCAGCGCCAGAGTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262502.5
ENST00000563236.6
CDS TCA 72 bp TCCTCTTGTTCAGCCACTTGGTGTGCCCGTTGGCGATaGGCTGGAGCTCAGGCATCCTCTGCTTGTGGGGTC +
Preference number: 6 (lower is better)
Translates to: SSCSATWCARWR*AGAQASSACGV
Trigger: GACCCCACAAGCAGAGGATGCCTGAGCTCCAGCTCATCGCCAACGGGCACACCAAGTGGCTGAACAAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS GCA 72 bp GCACCACATCGATCGTGTTGTAGCCAAAGGTGCGCATaGAGAAGGTGCTGCTGTGGGTCAGGTGGCTGGGGT +
Preference number: 6 (lower is better)
Translates to: APHRSCCSQRCA*RRCCCGSGGWG
Trigger: ACCCCAGCCACCTGACCCACAGCAGCACCTTCTGCATGCGCACCTTTGGCTACAACACGATCGATGTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS GCA 72 bp AGGCCAGCAGGTAGCCACGCACGGGCTCCTTGTTCTTaGCATAGCCTTTGCCGAAGAAGCCGATCAGTGGGT +
Preference number: 6 (lower is better)
Translates to: RPAGSHARAPCS*HSLCRRSRSVG
Trigger: ACCCACTGATCGGCTTCTTCGGCAAAGGCTATGGCAAGAACAAGGAGCCCGTGCGTGGCTACCTGCTGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS CCA 72 bp TTGTTCAGCCACTTGGTGTGCCCGTTGGCGATGAGCTaGAGCTCAGGCATCCTCTGCTTGTGGGGTCCGATG +
Preference number: 6 (lower is better)
Translates to: LFSHLVCPLAMS*SSGILCLWGPM
Trigger: CATCGGACCCCACAAGCAGAGGATGCCTGAGCTCCAGCTCATCGCCAACGGGCACACCAAGTGGCTGAACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS CCA 72 bp TTTCCTCGGATCAGGATGACTGGAGGTCTGAGGTCCTaGGACAGGGTCTCCAGCCAGGCCATGTACAGCGAG +
Preference number: 6 (lower is better)
Translates to: FPRIRMTGGLRS*DRVSSQAMYSE
Trigger: CTCGCTGTACATGGCCTGGCTGGAGACCCTGTCCCAGGACCTCAGACCTCCAGTCATCCTGATCCGAGGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000563352.1
ENST00000566786.5
CDS CAA 90 bp CCCAGCCACATGCTAAGAATCGCCAGGGCTATGTTTATGGGAACTTaGGCCCTTCTGCTTCCTAGGGGAAGGCTTGGGCCCTCCGTGGTG +
Preference number: 6 (lower is better)
Translates to: PSHMLRIARAMFMGT*ALLLPRGRLGPSVV
Trigger: CACCACGGAGGGCCCAAGCCTTCCCCTAGGAAGCAGAAGGGCCAAAGTTCCCATAAACATAGCCCTGGCGATTCTTAGCATGTGGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569002.1
CDS GCA 72 bp AGCCACGCACGGGCTCCTTGTTCTTGCCATAGCCTTTaGCGAAGAAGCCGATCAGTGGGTACAGCTGGTCCT +
Preference number: 6 (lower is better)
Translates to: SHARAPCSCHSL*RRSRSVGTAGP
Trigger: AGGACCAGCTGTACCCACTGATCGGCTTCTTCGGCAAAGGCTATGGCAAGAACAAGGAGCCCGTGCGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS GCA 72 bp GACGGAAGGGTGCAATCATGTCCTCAAACCTCTTGGTaGTGGGGACGAGAAAGTGGGTTGAGGCCGGCTGAG +
Preference number: 6 (lower is better)
Translates to: DGRVQSCPQTSW*WGRESGLRPAE
Trigger: CTCAGCCGGCCTCAACCCACTTTCTCGTCCCCAGCACCAAGAGGTTTGAGGACATGATTGCACCCTTCCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569002.1
CDS CCA 72 bp GAGCACGTTTTCCTGGTTTCCTCGGATCAGGATGACTaGAGGTCTGAGGTCCTGGGACAGGGTCTCCAGCCA +
Preference number: 6 (lower is better)
Translates to: EHVFLVSSDQDD*RSEVLGQGLQP
Trigger: TGGCTGGAGACCCTGTCCCAGGACCTCAGACCTCCAGTCATCCTGATCCGAGGAAACCAGGAAAACGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000563352.1
ENST00000566786.5
CDS CCA 72 bp GGAAGGGTGCAATCATGTCCTCAAACCTCTTGGTGCTaGGGACGAGAAAGTGGGTTGAGGCCGGCTGAGACG +
Preference number: 6 (lower is better)
Translates to: GRVQSCPQTSWC*GRESGLRPAET
Trigger: CGTCTCAGCCGGCCTCAACCCACTTTCTCGTCCCCAGCACCAAGAGGTTTGAGGACATGATTGCACCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569002.1
CDS TCA 72 bp CCCAAACAGCGCCGCCCACTTGTTGTAGTATTGGAATaGAGGTCTCCACCCAGGCGAGTTGGTGATGGAGGC +
Preference number: 6 (lower is better)
Translates to: PKQRRPLVVVLE*RSPPRRVGDGG
Trigger: GCCTCCATCACCAACTCGCCTGGGTGGAGACCTTCATTCCAATACTACAACAAGTGGGCGGCGCTGTTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS TCA 72 bp CCACTGTGGCCGGGTGAGCCGACTGCCAGTTCTTCTTaGACCCAACCACCAGAATGTTGGGCTTCATTCTCC +
Preference number: 6 (lower is better)
Translates to: PLWPGEPTASSS*TQPPECWASFS
Trigger: GGAGAATGAAGCCCAACATTCTGGTGGTTGGGTTCAAGAAGAACTGGCAGTCGGCTCACCCGGCCACAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS GCA 72 bp AAGGCCTTGATCTTCCTCTTGTTCAGCCACTTGGTGTaGCCGTTGGCGATGAGCTGGAGCTCAGGCATCCTC +
Preference number: 6 (lower is better)
Translates to: KALIFLLFSHLV*PLAMSWSSGIL
Trigger: GAGGATGCCTGAGCTCCAGCTCATCGCCAACGGGCACACCAAGTGGCTGAACAAGAGGAAGATCAAGGCCTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS CCA 72 bp CATCACGCACCACGCAGGAGCCAATGGTGGCTGAGATaGCCAGGTAGGAAATGGTCGTCCAGAAAATGGCCA +
Preference number: 6 (lower is better)
Translates to: HHAPRRSQWWLR*PGRKWSSRKWP
Trigger: TGGCCATTTTCTGGACGACCATTTCCTACCTGGCCATCTCAGCCACCATTGGCTCCTGCGTGGTGCGTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS CCA 72 bp TCAGACGGAAGGGTGCAATCATGTCCTCAAACCTCTTaGTGCTGGGGACGAGAAAGTGGGTTGAGGCCGGCT +
Preference number: 6 (lower is better)
Translates to: SDGRVQSCPQTS*CWGRESGLRPA
Trigger: AGCCGGCCTCAACCCACTTTCTCGTCCCCAGCACCAAGAGGTTTGAGGACATGATTGCACCCTTCCGTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569002.1
CDS CAA 72 bp CCTCAAACCTCTTGGTGCTGGGGACGAGAAAGTGGGTaGAGGCCGGCTGAGACGATAACCCCATTTCTAGGG +
Preference number: 6 (lower is better)
Translates to: PQTSWCWGRESG*RPAETITPFLG
Trigger: CCCTAGAAATGGGGTTATCGTCTCAGCCGGCCTCAACCCACTTTCTCGTCCCCAGCACCAAGAGGTTTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569002.1
CDS CAA 90 bp ATCTCCTCATCTGAGATCTTCCAGGGGCAGTCCCGCCGCATCTCGTaGACAGTGGCCTCATCCTTGAAGCCATCATTCAGACGGAAGGGT +
Preference number: 6 (lower is better)
Translates to: ISSSEIFQGQSRRIS*TVASSLKPSFRRKG
Trigger: ACCCTTCCGTCTGAATGATGGCTTCAAGGATGAGGCCACTGTCAACGAGATGCGGCGGGACTGCCCCTGGAAGATCTCAGATGAGGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
ENST00000569002.1
CDS CCA 72 bp GTTCTTGCCATAGCCTTTGCCGAAGAAGCCGATCAGTaGGTACAGCTGGTCCTCGCAAAGGCACTGGAAGAC +
Preference number: 6 (lower is better)
Translates to: VLAIAFAEEADQ*VQLVLAKALED
Trigger: GTCTTCCAGTGCCTTTGCGAGGACCAGCTGTACCCACTGATCGGCTTCTTCGGCAAAGGCTATGGCAAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS CCA 72 bp TCAGCCCGAGGGTTCTGGTTGATGTCAGGGAGGATGTaGACTTCATGGAATCCCAGTCGGAACTTGCTCAGC +
Preference number: 6 (lower is better)
Translates to: SARGFWLMSGRM*TSWNPSRNLLS
Trigger: GCTGAGCAAGTTCCGACTGGGATTCCATGAAGTCCACATCCTCCCTGACATCAACCAGAACCCTCGGGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS CAA 72 bp GACTGCCAGTTCTTCTTGAACCCAACCACCAGAATGTaGGGCTTCATTCTCCCGAGACCTGCGGCCTGCATG +
Preference number: 6 (lower is better)
Translates to: DCQFFLNPTTRM*GFILPRPAACM
Trigger: CATGCAGGCCGCAGGTCTCGGGAGAATGAAGCCCAACATTCTGGTGGTTGGGTTCAAGAAGAACTGGCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS CAA 72 bp GGGTCAAACACGGGGTTAATGTGCGCCTGCATCATCTaGGACACGTTGAGTCCCTCCCGCATCCTCATGACA +
Preference number: 6 (lower is better)
Translates to: GSNTGLMCACII*DTLSPSRILMT
Trigger: TGTCATGAGGATGCGGGAGGGACTCAACGTGTCCAAGATGATGCAGGCGCACATTAACCCCGTGTTTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS CAA 72 bp TCTGAGATCTTCCAGGGGCAGTCCCGCCGCATCTCGTaGACAGTGGCCTCATCCTTGAAGCCATCATTCAGA +
Preference number: 6 (lower is better)
Translates to: SEIFQGQSRRIS*TVASSLKPSFR
Trigger: TCTGAATGATGGCTTCAAGGATGAGGCCACTGTCAACGAGATGCGGCGGGACTGCCCCTGGAAGATCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
ENST00000569002.1
CDS TCA 72 bp CAAACCTCTTGGTGTGCTCAGCCCGAGGGTTCTGGTTaGTGTCAGGGAGGATGTGGACTTCATGGAATCCCA +
Preference number: 6 (lower is better)
Translates to: QTSWCAQPEGSG*CQGGCGLHGIP
Trigger: TGGGATTCCATGAAGTCCACATCCTCCCTGACATCAACCAGAACCCTCGGGCTGAGCACACCAAGAGGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS GCA 72 bp CATCGTCAAAGAGCCAGTAGATGTCTATGGTCTTCTTaGCCTGCTCCGACTGGAAGATGGTGGTGGCCTGCT +
Preference number: 6 (lower is better)
Translates to: HRQRASRCLWSS*PAPTGRWWWPA
Trigger: AGCAGGCCACCACCATCTTCCAGTCGGAGCAGGGCAAGAAGACCATAGACATCTACTGGCTCTTTGACGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS GCA 72 bp GGCCTCATCCTTGAAGCCATCATTCAGACGGAAGGGTaGAATCATGTCCTCAAACCTCTTGGTGCTGGGGAC +
Preference number: 6 (lower is better)
Translates to: GLILEAIIQTEG*NHVLKPLGAGD
Trigger: GTCCCCAGCACCAAGAGGTTTGAGGACATGATTGCACCCTTCCGTCTGAATGATGGCTTCAAGGATGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569002.1
CDS CAA 72 bp ATCCTGTTAATCTGGCCGCCTACGAACACACGGATCTaGCATTTGCTCCACCTCCTCTTGCGGCCAAGGAGA +
Preference number: 6 (lower is better)
Translates to: ILLIWPPTNTRI*HLLHLLLRPRR
Trigger: TCTCCTTGGCCGCAAGAGGAGGTGGAGCAAATGCAAGATCCGTGTGTTCGTAGGCGGCCAGATTAACAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS CAA 72 bp TCAAACCTCTTGGTGTGCTCAGCCCGAGGGTTCTGGTaGATGTCAGGGAGGATGTGGACTTCATGGAATCCC +
Preference number: 6 (lower is better)
Translates to: SNLLVCSARGFW*MSGRMWTSWNP
Trigger: GGGATTCCATGAAGTCCACATCCTCCCTGACATCAACCAGAACCCTCGGGCTGAGCACACCAAGAGGTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS CAA 72 bp ATGCTAAGAATCGCCAGGGCTATGTTTATGGGAACTTaGGCCCTTCTGCTTCCTAGGGGAAGGCTTGGGCCC +
Preference number: 6 (lower is better)
Translates to: MLRIARAMFMGT*ALLLPRGRLGP
Trigger: GGGCCCAAGCCTTCCCCTAGGAAGCAGAAGGGCCAAAGTTCCCATAAACATAGCCCTGGCGATTCTTAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569002.1
CDS CAA 90 bp ATCATGTCCTCAAACCTCTTGGTGTGCTCAGCCCGAGGGTTCTGGTaGATGTCAGGGAGGATGTGGACTTCATGGAATCCCAGTCGGAAC +
Preference number: 6 (lower is better)
Translates to: IMSSNLLVCSARGFW*MSGRMWTSWNPSRN
Trigger: GTTCCGACTGGGATTCCATGAAGTCCACATCCTCCCTGACATCAACCAGAACCCTCGGGCTGAGCACACCAAGAGGTTTGAGGACATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS GCA 72 bp GGCCTCATCCTTGAAGCCATCATTCAGACGGAAGGGTaGAATCATGTCCTCAAACCTCTTGGTGTGCTCAGC +
Preference number: 6 (lower is better)
Translates to: GLILEAIIQTEG*NHVLKPLGVLS
Trigger: GCTGAGCACACCAAGAGGTTTGAGGACATGATTGCACCCTTCCGTCTGAATGATGGCTTCAAGGATGAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS CCA 72 bp GAAGAAGATGGAGAACATTCCGAAGAAGGTGCCATCTaGACCCCGCCAGTCAGGCACCAAGTTCTGGACAAA +
Preference number: 6 (lower is better)
Translates to: EEDGEHSEEGAI*TPPVRHQVLDK
Trigger: TTTGTCCAGAACTTGGTGCCTGACTGGCGGGGTCCAGATGGCACCTTCTTCGGAATGTTCTCCATCTTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS CCA 72 bp ATGATCGCCTTTCTCTCCTGGTCCATCCTGTTAATCTaGCCGCCTACGAACACACGGATCTTGCATTTGCTC +
Preference number: 6 (lower is better)
Translates to: MIAFLSWSILLI*PPTNTRILHLL
Trigger: GAGCAAATGCAAGATCCGTGTGTTCGTAGGCGGCCAGATTAACAGGATGGACCAGGAGAGAAAGGCGATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS CCA 72 bp AACTTGCTCAGCAGAGAAATGATCGCCTTTCTCTCCTaGTCCATCCTGTTAATCTGGCCGCCTACGAACACA +
Preference number: 6 (lower is better)
Translates to: NLLSREMIAFLS*SILLIWPPTNT
Trigger: TGTGTTCGTAGGCGGCCAGATTAACAGGATGGACCAGGAGAGAAAGGCGATCATTTCTCTGCTGAGCAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262502.5
ENST00000438926.6
ENST00000563236.6
ENST00000566786.5
CDS CCA 72 bp TGGGCAAAGTGCTCTGTCCTGTCAATGAAGAGTAACTaGTGCTGGTGCCTTTTGAATTCTCCTGGGCATCTT +
Preference number: 6 (lower is better)
Translates to: WAKCSVLSMKSN*CWCLLNSPGHL
Trigger: AAGATGCCCAGGAGAATTCAAAAGGCACCAGCACCAGTTACTCTTCATTGACAGGACAGAGCACTTTGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563352.1
CDS CCA 72 bp TCCCTCTTGAAAGAGCTGGGTTCCCTCTTTGCCAAGTaGAATTTGGTAGGAAAAGGCAGCCAACAGGAAAAA +
Preference number: 6 (lower is better)
Translates to: SLLKELGSLFAK*NLVGKGSQQEK
Trigger: TTTTTCCTGTTGGCTGCCTTTTCCTACCAAATTCCACTTGGCAAAGAGGGAACCCAGCTCTTTCAAGAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569002.1
CDS GCA 72 bp GCAAAGTGCTCTGTCCTGTCAATGAAGAGTAACTGGTaGTGGTGCCTTTTGAATTCTCCTGGGCATCTTTTT +
Preference number: 6 (lower is better)
Translates to: AKCSVLSMKSNW*WCLLNSPGHLF
Trigger: AAAAAGATGCCCAGGAGAATTCAAAAGGCACCAGCACCAGTTACTCTTCATTGACAGGACAGAGCACTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563352.1
CDS CAA 72 bp TTGAAAGAGCTGGGTTCCCTCTTTGCCAAGTGGAATTaGGTAGGAAAAGGCAGCCAACAGGAAAAAGCAATG +
Preference number: 6 (lower is better)
Translates to: LKELGSLFAKWN*VGKGSQQEKAM
Trigger: CATTGCTTTTTCCTGTTGGCTGCCTTTTCCTACCAAATTCCACTTGGCAAAGAGGGAACCCAGCTCTTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569002.1