RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC12A2 (Homo sapiens)

Ensembl gene IDs: ENSG00000064651

Ensembl transcript IDs: ENST00000262461.7, ENST00000343225.4, ENST00000502849.1, ENST00000504416.5, ENST00000507791.5, ENST00000509205.5, ENST00000509616.1, ENST00000628403.2

Found 343 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTaGTTTCAAATTAATGAAATCGTGAAAGAAAAGTCACCATTCGCC +
Preference number: 1 (lower is better)
Translates to: NRSLHTRYQWSNFPV*FQINEIVKEKSPFA
Trigger: GGCGAATGGTGACTTTTCTTTCACGATTTCATTAATTTGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
3UTR TCA 90 bp GAATGTTCCTTTAATAACTCATTTAACCTGATCTGCCGGTATGTCTaGAATGAAACAGGACAGTCATTCCTAGACCATGTGGAAATAAGA +
Preference number: 1 (lower is better)
Translates to: ECSFNNSFNLICRYV*NETGQSFLDHVEIR
Trigger: TCTTATTTCCACATGGTCTAGGAATGACTGTCCTGTTTCATTTCAGACATACCGGCAGATCAGGTTAAATGAGTTATTAAAGGAACATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509205.5
3UTR TCA 90 bp TCAGTTCAACAGAGAAGAATCACCATTAAGATTGAGATATGGAATTaGCTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTT +
Preference number: 1 (lower is better)
Translates to: SVQQRRITIKIEIWN*LKPKSPYTLSMEQL
Trigger: AAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAATTCCATATCTCAATCTTAATGGTGATTCTTCTCTGTTGAACTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
3UTR-3UTR TCA 90 bp GAGAGCACTAGACACAGCACCTTTTCGTGCAACTGGGAGACTCATGACAATAATCCGGTATGTCTGAAATaGAACAGGACAGTCATTCCT +
Preference number: 2 (lower is better)
Translates to: ESTRHSTFSCNWETHDNNPVCLK*NRTVIP
Trigger: AGGAATGACTGTCCTGTTTCATTTCAGACATACCGG...ATTATTGTCATGAGTCTCCCAGTTGCACGAAAAGGTGCTGTGTCTAGTGCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509205.5
3UTR-3UTR TCA 90 bp AATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGTACTACACTAGGCACTaGAGTACCATTCTGGAGGGC +
Preference number: 2 (lower is better)
Translates to: NVSLKISVTTLGTEVPFWYYTRH*STILEG
Trigger: GCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTA...CCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
3UTR-3UTR CCA 90 bp ACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTACTGAAGTACCATTCTaGAGGGCTGTCCACTGTATA +
Preference number: 2 (lower is better)
Translates to: TKTEVSIHVINGATFLCATEVPF*RAVHCI
Trigger: TATACAGTGGACAGCCCTCCAGAATGGTACTTCAGT...AGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
3UTR-3UTR TCA 90 bp AATCGTGAAAGAAAAGTCACCATTCGCCATTGTGATGTTAATGTGTCATTGAAGTACTACACTAGGCACTaGAGTACCATTCTGGAGGGC +
Preference number: 2 (lower is better)
Translates to: NRERKVTIRHCDVNVSLKYYTRH*STILEG
Trigger: GCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTA...CTTCAATGACACATTAACATCACAATGGCGAATGGTGACTTTTCTTTCACGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
3UTR-3UTR CCA 90 bp TTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTACTGAAGTACCATTCTaGAGGGCTGTCCACTGTATA +
Preference number: 2 (lower is better)
Translates to: LTKTEVSIHVINGATFLCTEVPF*RAVHCI
Trigger: TATACAGTGGACAGCCCTCCAGAATGGTACTTCAGT...ACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
3UTR-3UTR TCA 90 bp ACTCATGAAGCAAAAATGCTGCACACCACTGAAAATAATAACGTTATAGATGTCTACTACACTAGGCACTaGAGTACCATTCTGGAGGGC +
Preference number: 2 (lower is better)
Translates to: THEAKMLHTTENNNVIDVYYTRH*STILEG
Trigger: GCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTA...GACATCTATAACGTTATTATTTTCAGTGGTGTGCAGCATTTTTGCTTCATGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262461.7
3UTR-3UTR CCA 90 bp ATGGAATTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCACTGAAGTACCATTCTaGAGGGCTGTCCACTGTATA +
Preference number: 2 (lower is better)
Translates to: MELTKTEVSIHVINGATFTEVPF*RAVHCI
Trigger: TATACAGTGGACAGCCCTCCAGAATGGTACTTCAGT...GAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAATTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
3UTR-3UTR TCA 90 bp TTCTACTGTCTTTACCCCCAAACATTGCAAAACCTGCAATGGAACAATGCTGTGATTGAGATATGGAATTaGCTAAAACCGAAGTCTCCA +
Preference number: 2 (lower is better)
Translates to: FYCLYPQTLQNLQWNNAVIEIWN*LKPKSP
Trigger: TGGAGACTTCGGTTTTAGTCAATTCCATATCTCAAT...CACAGCATTGTTCCATTGCAGGTTTTGCAATGTTTGGGGGTAAAGACAGTAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262461.7
3UTR-3UTR TCA 90 bp AAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCATTGAGATATGGAATTaGCTAAAACCGAAGTCTCCA +
Preference number: 2 (lower is better)
Translates to: KTEVSIHVINGATFLCAFIEIWN*LKPKSP
Trigger: TGGAGACTTCGGTTTTAGTCAATTCCATATCTCAAT...GAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
3UTR-3UTR TCA 90 bp TTCTACTGTCTTTACCCCCAAACATTGCAAAACCTGCAATGGAACAATGCTGTGCACCTTTGTTCTCTATaGAACCTGTATCTGTTAATC +
Preference number: 2 (lower is better)
Translates to: FYCLYPQTLQNLQWNNAVHLCSL*NLYLLI
Trigger: GATTAACAGATACAGGTTTCATAGAGAACAAAGGTG...CACAGCATTGTTCCATTGCAGGTTTTGCAATGTTTGGGGGTAAAGACAGTAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262461.7
3UTR-3UTR TCA 90 bp ATGGAATTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCATAACTCATTTAACCTaGTCTGCCGGTATGTCTGAA +
Preference number: 2 (lower is better)
Translates to: MELTKTEVSIHVINGATFITHLT*SAGMSE
Trigger: TTCAGACATACCGGCAGATCAGGTTAAATGAGTTAT...GAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAATTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509205.5
3UTR-3UTR CAA 90 bp ACTCATGAAGCAAAAATGCTGCACACCACTGAAAATAATAACGTTATAGATGTCAGGCAGGAGAATCGCTaGAACTGGGGAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: THEAKMLHTTENNNVIDVRQENR*NWGGGG
Trigger: ACCTCCACCTCCCCAGTTCAAGCGATTCTCCTGCCT...GACATCTATAACGTTATTATTTTCAGTGGTGTGCAGCATTTTTGCTTCATGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262461.7
3UTR TCA 72 bp TGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTaGAGTACCATTCTGGAGGGCTGTCCACTGTATAGA +
Preference number: 3 (lower is better)
Translates to: CVIEDFSYYTRH*STILEGCPLYR
Trigger: TCTATACAGTGGACAGCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
3UTR TCA 72 bp TTTAATAACTCATTTAACCTGATCTGCCGGTATGTCTaGAATGAAACAGGACAGTCATTCCTAGACCATGTG +
Preference number: 3 (lower is better)
Translates to: FNNSFNLICRYV*NETGQSFLDHV
Trigger: CACATGGTCTAGGAATGACTGTCCTGTTTCATTTCAGACATACCGGCAGATCAGGTTAAATGAGTTATTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509205.5
3UTR GCA 72 bp ACCTGTGCACATTTCAAGATAGCAGCACTCAGTCCATaGCCTATTATCCATCTTAAAAGTTCACACATTATT +
Preference number: 3 (lower is better)
Translates to: TCAHFKIAALSP*PIIHLKSSHII
Trigger: AATAATGTGTGAACTTTTAAGATGGATAATAGGGCATGGACTGAGTGCTGCTATCTTGAAATGTGCACAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262461.7
3UTR TCA 72 bp CAGAGAAGAATCACCATTAAGATTGAGATATGGAATTaGCTAAAACCGAAGTCTCCATACACGTTATCAATG +
Preference number: 3 (lower is better)
Translates to: QRRITIKIEIWN*LKPKSPYTLSM
Trigger: CATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAATTCCATATCTCAATCTTAATGGTGATTCTTCTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp ACTACACTAGGCACTGAAGTACCATTCTGGAGGGCTGTCCACTGTATAGAACATCCGAGGGCACAGCCGTaGCGGGCAGTTCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: TTLGTEVPFWRAVHCIEHPRAQP*RAVPPW
Trigger: CCAGGGTGGAACTGCCCGGCACGGCTGTGCCCTCGG...ATGTTCTATACAGTGGACAGCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp ACTACACTAGGCACTGAAGTACCATTCTGGAGGGCTGTCCACTGTATAGAACATCGCCGGAGTGCAGGCTaGTGCCCTCGCTCAGCACCG +
Preference number: 4 (lower is better)
Translates to: TTLGTEVPFWRAVHCIEHRRSAG*CPRSAP
Trigger: CGGTGCTGAGCGAGGGCAGCAGCCTGCACTCCGGCG...ATGTTCTATACAGTGGACAGCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp ACTACACTAGGCACTGAAGTACCATTCTGGAGGGCTGTCCACTGTATAGAACATGGCTCTGGCTCGGGGTaGGCCCCAAGGGTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: TTLGTEVPFWRAVHCIEHGSGSG*APRVCP
Trigger: TGGGCAGACCCTTGGGGCCCACCCCGAGCCAGAGCC...ATGTTCTATACAGTGGACAGCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp TTCTACTGTCTTTACCCCCAAACATTGCAAAACCTGCAATGGAACAATGCTGTGGGGCCGCCGCTAGCCTaGACGGCCACAGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: FYCLYPQTLQNLQWNNAVGPPLA*TATEAT
Trigger: GGTGGCCTCTGTGGCCGTCCAGGCTAGCGGCGGCCC...CACAGCATTGTTCCATTGCAGGTTTTGCAATGTTTGGGGGTAAAGACAGTAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262461.7
CDS-3UTR CCA 90 bp AAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCACGGGCAGTTCCACCCTaGCTGCGGCCAGCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: KPKSPYTLSMEQLSCVLSRAVPP*LRPAQR
Trigger: CCGCTGCGCTGGCCGCAGCCAGGGTGGAACTGCCCG...TGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp AGCACTAGACACAGCACCTTTTCGTGCAACTGGGAGACTCATGACAATAATATTCGGGCAGTTCCACCCTaGCTGCGGCCAGCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: STRHSTFSCNWETHDNNIRAVPP*LRPAQR
Trigger: CCGCTGCGCTGGCCGCAGCCAGGGTGGAACTGCCCG...AATATTATTGTCATGAGTCTCCCAGTTGCACGAAAAGGTGCTGTGTCTAGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509205.5
CDS-3UTR TCA 90 bp CGAACTAGGAGGATTGGTGGTAGGTCCTTAGATAGAGCTTCTAACCATGCCATGGACCCCGGCAGCATCTaGCAGGCTGTCTTCAGCCGA +
Preference number: 4 (lower is better)
Translates to: RTRRIGGRSLDRASNHAMDPGSI*QAVFSR
Trigger: TCGGCTGAAGACAGCCTGTCAGATGCTGCCGGGGTC...CATGGCATGGTTAGAAGCTCTATCTAAGGACCTACCACCAATCCTCCTAGTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509205.5
CDS-3UTR GCA 90 bp AAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCAGACCCCCGGCGGAACTaGAGAGCCCGGCGGACGTCT +
Preference number: 4 (lower is better)
Translates to: KPKSPYTLSMEQLSCVLSDPRRN*RARRTS
Trigger: AGACGTCCGCCGGGCTCTGCAGTTCCGCCGGGGGTC...TGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp GTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGCCGCGGCTCCATAGCTaGCCGACCCCCGGCGGAACT +
Preference number: 4 (lower is better)
Translates to: VSLKISVTTLGTEVPFWRPRLHS*PTPGGT
Trigger: AGTTCCGCCGGGGGTCGGGCAGCTATGGAGCCGCGG...CCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp GAGAGCACTAGACACAGCACCTTTTCGTGCAACTGGGAGACTCATGACAATAATCGGAGTGCAGGCTGCTaGCCTCGCTCAGCACCGTGT +
Preference number: 4 (lower is better)
Translates to: ESTRHSTFSCNWETHDNNRSAGC*PRSAPC
Trigger: ACACGGTGCTGAGCGAGGGCAGCAGCCTGCACTCCG...ATTATTGTCATGAGTCTCCCAGTTGCACGAAAAGGTGCTGTGTCTAGTGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509205.5
CDS-3UTR GCA 90 bp AAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCACGCCGGAGTGCAGGCTaGTGCCCTCGCTCAGCACCG +
Preference number: 4 (lower is better)
Translates to: KPKSPYTLSMEQLSCVLSRRSAG*CPRSAP
Trigger: CGGTGCTGAGCGAGGGCAGCAGCCTGCACTCCGGCG...TGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp AAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCCGCCGGAGTGCAGGCTaGTGCCCTCGCTCAGCACCG +
Preference number: 4 (lower is better)
Translates to: KTEVSIHVINGATFLCAFRRSAG*CPRSAP
Trigger: CGGTGCTGAGCGAGGGCAGCAGCCTGCACTCCGGCG...GAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp GTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGACCCCTGGCCGGCGGTaGCCACAGCCGCAAGACCAG +
Preference number: 4 (lower is better)
Translates to: VSLKISVTTLGTEVPFWRTPGRR*PQPQDQ
Trigger: CTGGTCTTGCGGCTGTGGCCACCGCCGGCCAGGGGT...CCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp TTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGACCCCCGGCGGAACTaGAGAGCCCGGCGGACGTCT +
Preference number: 4 (lower is better)
Translates to: LTKTEVSIHVINGATFLCDPRRN*RARRTS
Trigger: AGACGTCCGCCGGGCTCTGCAGTTCCGCCGGGGGTC...ACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp TTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTCCGCGGCTCCATAGCTaGCCGACCCCCGGCGGAACT +
Preference number: 4 (lower is better)
Translates to: LTKTEVSIHVINGATFLCPRLHS*PTPGGT
Trigger: AGTTCCGCCGGGGGTCGGGCAGCTATGGAGCCGCGG...ACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp AATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGGGGCCGCCGCTAGCCTaGACGGCCACAGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: NVSLKISVTTLGTEVPFWGPPLA*TATEAT
Trigger: GGTGGCCTCTGTGGCCGTCCAGGCTAGCGGCGGCCC...CCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262461.7
ENST00000509205.5
CDS-3UTR CCA 90 bp ATGGAATTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCGGGCAGTTCCACCCTaGCTGCGGCCAGCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: MELTKTEVSIHVINGATFRAVPP*LRPAQR
Trigger: CCGCTGCGCTGGCCGCAGCCAGGGTGGAACTGCCCG...GAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAATTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp AATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGGACCCCCGGCGGAACTaGAGAGCCCGGCGGACGTCT +
Preference number: 4 (lower is better)
Translates to: NVSLKISVTTLGTEVPFWDPRRN*RARRTS
Trigger: AGACGTCCGCCGGGCTCTGCAGTTCCGCCGGGGGTC...CCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp ATGGAATTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCCGAGGGCACAGCCGTaGCGGGCAGTTCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: MELTKTEVSIHVINGATFPRAQP*RAVPPW
Trigger: CCAGGGTGGAACTGCCCGGCACGGCTGTGCCCTCGG...GAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAATTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp ACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTCGGAGTGCAGGCTGCTaGCCTCGCTCAGCACCGTGT +
Preference number: 4 (lower is better)
Translates to: TKTEVSIHVINGATFLCARSAGC*PRSAPC
Trigger: ACACGGTGCTGAGCGAGGGCAGCAGCCTGCACTCCG...AGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp AATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGACCCCTGGCCGGCGGTaGCCACAGCCGCAAGACCAG +
Preference number: 4 (lower is better)
Translates to: NVSLKISVTTLGTEVPFWTPGRR*PQPQDQ
Trigger: CTGGTCTTGCGGCTGTGGCCACCGCCGGCCAGGGGT...CCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp GTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGACCTGGAAACGGCTCTaGCTCGGGGTGGGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: VSLKISVTTLGTEVPFWRTWKRL*LGVGPK
Trigger: CTTGGGGCCCACCCCGAGCCAGAGCCGTTTCCAGGT...CCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp AAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCGTGTCCCCGCCGTTCTaGAAGCTCACGTTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: KTEVSIHVINGATFLCAFVSPPF*KLTLGP
Trigger: CGGGCCCAACGTGAGCTTCCAGAACGGCGGGGACAC...GAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp TCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGGCTGTGTCCCCGCCGTTCTaGAAGCTCACGTTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: SLKISVTTLGTEVPFWRAVSPPF*KLTLGP
Trigger: CGGGCCCAACGTGAGCTTCCAGAACGGCGGGGACAC...AGCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp ACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTGTGTCCCCGCCGTTCTaGAAGCTCACGTTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: TKTEVSIHVINGATFLCAVSPPF*KLTLGP
Trigger: CGGGCCCAACGTGAGCTTCCAGAACGGCGGGGACAC...AGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp AAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCAGACCCCGGCAGCATCTaGCAGGCTGTCTTCAGCCGA +
Preference number: 4 (lower is better)
Translates to: KPKSPYTLSMEQLSCVLSDPGSI*QAVFSR
Trigger: TCGGCTGAAGACAGCCTGTCAGATGCTGCCGGGGTC...TGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp AAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCGACCCCGGCAGCATCTaGCAGGCTGTCTTCAGCCGA +
Preference number: 4 (lower is better)
Translates to: KTEVSIHVINGATFLCAFDPGSI*QAVFSR
Trigger: TCGGCTGAAGACAGCCTGTCAGATGCTGCCGGGGTC...GAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp AATCGTGAAAGAAAAGTCACCATTCGCCATTGTGATGTTAATGTGTCATTGAAGCCGAGGGCACAGCCGTaGCGGGCAGTTCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: NRERKVTIRHCDVNVSLKPRAQP*RAVPPW
Trigger: CCAGGGTGGAACTGCCCGGCACGGCTGTGCCCTCGG...CTTCAATGACACATTAACATCACAATGGCGAATGGTGACTTTTCTTTCACGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp TCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGGCTCGACGAGGAGGCAGCTaGGTCCACGAAGTTCACGCG +
Preference number: 4 (lower is better)
Translates to: SLKISVTTLGTEVPFWRARRGGS*VHEVHA
Trigger: CGCGTGAACTTCGTGGACCCAGCTGCCTCCTCGTCG...AGCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp GTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGTCTGGAAGCTCACGTTaGGCCCGTCGACTCCGACCC +
Preference number: 4 (lower is better)
Translates to: VSLKISVTTLGTEVPFWRSGSSR*ARRLRP
Trigger: GGGTCGGAGTCGACGGGCCCAACGTGAGCTTCCAGA...CCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp AAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCGGCAGGAGAATCGCTTaGACTGGGGAGGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: KTEVSIHVINGATFLCAFGRRIA*TGEVEV
Trigger: GACCTCCACCTCCCCAGTTCAAGCGATTCTCCTGCC...GAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262461.7
ENST00000343225.4
CDS-3UTR CCA 90 bp CATTGTGATGTTAATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAACCCCTGGCCGGCGGTaGCCACAGCCGCAAGACCAG +
Preference number: 4 (lower is better)
Translates to: HCDVNVSLKISVTTLGTETPGRR*PQPQDQ
Trigger: CTGGTCTTGCGGCTGTGGCCACCGCCGGCCAGGGGT...TTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATTAACATCACAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp GGGAGACTCATGACAATAATATTAGCTGTGCTTGAATGTTCCTTTAATAACTCAGGCTCTGGCTCGGGGTaGGCCCCAAGGGTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: GRLMTIILAVLECSFNNSGSGSG*APRVCP
Trigger: TGGGCAGACCCTTGGGGCCCACCCCGAGCCAGAGCC...TGAGTTATTAAAGGAACATTCAAGCACAGCTAATATTATTGTCATGAGTCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509205.5
CDS-3UTR CCA 90 bp ACTACACTAGGCACTGAAGTACCATTCTGGAGGGCTGTCCACTGTATAGAACATGGTAGTGATCGATCCTaGGCACAGCGTCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: TTLGTEVPFWRAVHCIEHGSDRS*AQRPWC
Trigger: ACACCATGGACGCTGTGCCCAGGATCGATCACTACC...ATGTTCTATACAGTGGACAGCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp GTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGTTTTCCAGCTCGTCGTaGAGCTCCGCCAGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: VSLKISVTTLGTEVPFWRFSSSS*SSARLG
Trigger: GCCTAGCCTGGCGGAGCTCCACGACGAGCTGGAAAA...CCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp AATCGTGAAAGAAAAGTCACCATTCGCCATTGTGATGTTAATGTGTCATTGAAGCGGAGTGCAGGCTGCTaGCCTCGCTCAGCACCGTGT +
Preference number: 4 (lower is better)
Translates to: NRERKVTIRHCDVNVSLKRSAGC*PRSAPC
Trigger: ACACGGTGCTGAGCGAGGGCAGCAGCCTGCACTCCG...CTTCAATGACACATTAACATCACAATGGCGAATGGTGACTTTTCTTTCACGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp AATCGTGAAAGAAAAGTCACCATTCGCCATTGTGATGTTAATGTGTCATTGAAGACCTGGAAACGGCTCTaGCTCGGGGTGGGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: NRERKVTIRHCDVNVSLKTWKRL*LGVGPK
Trigger: CTTGGGGCCCACCCCGAGCCAGAGCCGTTTCCAGGT...CTTCAATGACACATTAACATCACAATGGCGAATGGTGACTTTTCTTTCACGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp AAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCATGTTGTGGCCGAAGGTaGGCAGGTAGTAGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: KPKSPYTLSMEQLSCVLSCCGRR*AGSRCW
Trigger: CCAACACCTACTACCTGCGCACCTTCGGCCACAACA...TGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp ACTCATGAAGCAAAAATGCTGCACACCACTGAAAATAATAACGTTATAGATGTCACCTGGAAACGGCTCTaGCTCGGGGTGGGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: THEAKMLHTTENNNVIDVTWKRL*LGVGPK
Trigger: CTTGGGGCCCACCCCGAGCCAGAGCCGTTTCCAGGT...GACATCTATAACGTTATTATTTTCAGTGGTGTGCAGCATTTTTGCTTCATGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262461.7
CDS-3UTR CCA 90 bp ATGGAATTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCGAAACCAGGTCCACCTaGAAACGGCTCTGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: MELTKTEVSIHVINGATFETRST*KRLWLG
Trigger: CCCGAGCCAGAGCCGTTTCCAGGTGGACCTGGTTTC...GAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAATTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp AATCGTGAAAGAAAAGTCACCATTCGCCATTGTGATGTTAATGTGTCATTGAAGCGACGAGGAGGCAGCTaGGTCCACGAAGTTCACGCG +
Preference number: 4 (lower is better)
Translates to: NRERKVTIRHCDVNVSLKRRGGS*VHEVHA
Trigger: CGCGTGAACTTCGTGGACCCAGCTGCCTCCTCGTCG...CTTCAATGACACATTAACATCACAATGGCGAATGGTGACTTTTCTTTCACGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp AATCGTGAAAGAAAAGTCACCATTCGCCATTGTGATGTTAATGTGTCATTGAAGTCTGGAAGCTCACGTTaGGCCCGTCGACTCCGACCC +
Preference number: 4 (lower is better)
Translates to: NRERKVTIRHCDVNVSLKSGSSR*ARRLRP
Trigger: GGGTCGGAGTCGACGGGCCCAACGTGAGCTTCCAGA...CTTCAATGACACATTAACATCACAATGGCGAATGGTGACTTTTCTTTCACGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp GTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGGGTAGTGATCGATCCTaGGCACAGCGTCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: VSLKISVTTLGTEVPFWRGSDRS*AQRPWC
Trigger: ACACCATGGACGCTGTGCCCAGGATCGATCACTACC...CCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp ACTACACTAGGCACTGAAGTACCATTCTGGAGGGCTGTCCACTGTATAGAACATCACATACATAGCAACTaGAACAGCGTTGGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: TTLGTEVPFWRAVHCIEHHIHSN*NSVGKG
Trigger: GCCTTTGCCAACGCTGTTGCAGTTGCTATGTATGTG...ATGTTCTATACAGTGGACAGCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp CGAACTAGGAGGATTGGTGGTAGGTCCTTAGATAGAGCTTCTAACCATGCCATGCTCCACCACGGTTTCTaGAAATCCAACCACATACAT +
Preference number: 4 (lower is better)
Translates to: RTRRIGGRSLDRASNHAMLHHGF*KSNHIH
Trigger: ATGTATGTGGTTGGATTTGCAGAAACCGTGGTGGAG...CATGGCATGGTTAGAAGCTCTATCTAAGGACCTACCACCAATCCTCCTAGTTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509205.5
CDS-3UTR GCA 90 bp ACTACACTAGGCACTGAAGTACCATTCTGGAGGGCTGTCCACTGTATAGAACATCTACCACATCCTTGGTaGCAGGAGATTTCTCTTGTG +
Preference number: 4 (lower is better)
Translates to: TTLGTEVPFWRAVHCIEHLPHPW*QEISLV
Trigger: CACAAGAGAAATCTCCTGGCACCAAGGATGTGGTAG...ATGTTCTATACAGTGGACAGCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp AATCGTGAAAGAAAAGTCACCATTCGCCATTGTGATGTTAATGTGTCATTGAAGGAAACCAGGTCCACCTaGAAACGGCTCTGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: NRERKVTIRHCDVNVSLKETRST*KRLWLG
Trigger: CCCGAGCCAGAGCCGTTTCCAGGTGGACCTGGTTTC...CTTCAATGACACATTAACATCACAATGGCGAATGGTGACTTTTCTTTCACGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp CATTGTGATGTTAATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAACGACGAGGAGGCAGCTaGGTCCACGAAGTTCACGCG +
Preference number: 4 (lower is better)
Translates to: HCDVNVSLKISVTTLGTERRGGS*VHEVHA
Trigger: CGCGTGAACTTCGTGGACCCAGCTGCCTCCTCGTCG...TTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATTAACATCACAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp TTCTACTGTCTTTACCCCCAAACATTGCAAAACCTGCAATGGAACAATGCTGTGTACTGCATTCCAGCGTaGCAACAGAGCAAGACTCCG +
Preference number: 4 (lower is better)
Translates to: FYCLYPQTLQNLQWNNAVYCIPA*QQSKTP
Trigger: CGGAGTCTTGCTCTGTTGCCACGCTGGAATGCAGTA...CACAGCATTGTTCCATTGCAGGTTTTGCAATGTTTGGGGGTAAAGACAGTAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262461.7
CDS-3UTR TCA 90 bp ACTACACTAGGCACTGAAGTACCATTCTGGAGGGCTGTCCACTGTATAGAACATGTACTAATACACCCTTaGTCCAGCCAAACTTCACGA +
Preference number: 4 (lower is better)
Translates to: TTLGTEVPFWRAVHCIEHVLIHP*SSQTSR
Trigger: TCGTGAAGTTTGGCTGGATCAAGGGTGTATTAGTAC...ATGTTCTATACAGTGGACAGCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp ACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTCCTTTGGGTATGGCTaGCTGAGGATCTGCAAGATC +
Preference number: 4 (lower is better)
Translates to: TKTEVSIHVINGATFLCASFGYG*LRICKI
Trigger: GATCTTGCAGATCCTCAGTCAGCCATACCCAAAGGA...AGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp ACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTACTACACTAGGCACTaGAGTACCATTCTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: TKTEVSIHVINGATFLCAYYTRH*STILEG
Trigger: GCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTA...AGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp AAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCATACTACACTAGGCACTaGAGTACCATTCTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: KPKSPYTLSMEQLSCVLSYYTRH*STILEG
Trigger: GCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTA...TGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp ACTACACTAGGCACTGAAGTACCATTCTGGAGGGCTGTCCACTGTATAGAACATCCTAGGTCATACTCATaGAGCAAAAATGCTGCACAC +
Preference number: 4 (lower is better)
Translates to: TTLGTEVPFWRAVHCIEHPRSYS*SKNAAH
Trigger: GTGTGCAGCATTTTTGCTTCATGAGTATGACCTAGG...ATGTTCTATACAGTGGACAGCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262461.7
CDS-3UTR GCA 90 bp ATGGAATTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCTGTTGTGGCCGAAGGTaGGCAGGTAGTAGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: MELTKTEVSIHVINGATFCCGRR*AGSRCW
Trigger: CCAACACCTACTACCTGCGCACCTTCGGCCACAACA...GAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAATTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp GAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCAAATTATGTTGTGGCCGAAGGTaGGCAGGTAGTAGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: EVSIHVINGATFLCAFKLCCGRR*AGSRCW
Trigger: CCAACACCTACTACCTGCGCACCTTCGGCCACAACA...TAATTTGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp ACTACACTAGGCACTGAAGTACCATTCTGGAGGGCTGTCCACTGTATAGAACATCTCCACCACGGTTTCTaGAAATCCAACCACATACAT +
Preference number: 4 (lower is better)
Translates to: TTLGTEVPFWRAVHCIEHLHHGF*KSNHIH
Trigger: ATGTATGTGGTTGGATTTGCAGAAACCGTGGTGGAG...ATGTTCTATACAGTGGACAGCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp TCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGGCTCCAAGACCAGCAGCCTaGATCAAATACTGTGCACCT +
Preference number: 4 (lower is better)
Translates to: SLKISVTTLGTEVPFWRAPRPAA*IKYCAP
Trigger: AGGTGCACAGTATTTGATGCAGGCTGCTGGTCTTGG...AGCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp ACTACACTAGGCACTGAAGTACCATTCTGGAGGGCTGTCCACTGTATAGAACATGTTGAGTTGCAGTCTTaGCATCCTCTTCCTCAACTT +
Preference number: 4 (lower is better)
Translates to: TTLGTEVPFWRAVHCIEHVELQS*HPLPQL
Trigger: AAGTTGAGGAAGAGGATGGCAAGACTGCAACTCAAC...ATGTTCTATACAGTGGACAGCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262461.7
ENST00000509205.5
CDS-3UTR GCA 90 bp AGCACTAGACACAGCACCTTTTCGTGCAACTGGGAGACTCATGACAATAATATTCACAGCACCTTTTCGTaGAACTGGGAGACTCATGAC +
Preference number: 4 (lower is better)
Translates to: STRHSTFSCNWETHDNNIHSTFS*NWETHD
Trigger: GTCATGAGTCTCCCAGTTGCACGAAAAGGTGCTGTG...AATATTATTGTCATGAGTCTCCCAGTTGCACGAAAAGGTGCTGTGTCTAGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509205.5
CDS-3UTR CCA 90 bp CATTGTGATGTTAATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGAAACCAGGTCCACCTaGAAACGGCTCTGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: HCDVNVSLKISVTTLGTEETRST*KRLWLG
Trigger: CCCGAGCCAGAGCCGTTTCCAGGTGGACCTGGTTTC...TTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATTAACATCACAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp CATTGTGATGTTAATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAATTTTCCAGCTCGTCGTaGAGCTCCGCCAGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: HCDVNVSLKISVTTLGTEFSSSS*SSARLG
Trigger: GCCTAGCCTGGCGGAGCTCCACGACGAGCTGGAAAA...TTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATTAACATCACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp ACTACACTAGGCACTGAAGTACCATTCTGGAGGGCTGTCCACTGTATAGAACATGCCATCGCTGATATTTaGCTTGATCGATGGACATCT +
Preference number: 4 (lower is better)
Translates to: TTLGTEVPFWRAVHCIEHAIADI*LDRWTS
Trigger: AGATGTCCATCGATCAAGCCAAATATCAGCGATGGC...ATGTTCTATACAGTGGACAGCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp AAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCATCTGCAAGATCACCTaGGATATTTGCTCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: KTEVSIHVINGATFLCAFICKIT*DICSSQ
Trigger: CTGGCTGGAGCAAATATCTCAGGTGATCTTGCAGAT...GAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp GTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGCTACCACATCCTTGGTaGCAGGAGATTTCTCTTGTG +
Preference number: 4 (lower is better)
Translates to: VSLKISVTTLGTEVPFWRLPHPW*QEISLV
Trigger: CACAAGAGAAATCTCCTGGCACCAAGGATGTGGTAG...CCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp ACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTCAACAGTGGTTGAGTTaGAGTCTTGCCATCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TKTEVSIHVINGATFLCAQQWLS*SLAILF
Trigger: GAAGAGGATGGCAAGACTGCAACTCAACCACTGTTG...AGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262461.7
ENST00000509205.5
CDS-3UTR CCA 90 bp AAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCCAACTGCAACAGCGTTaGCAAAGGCGAAGATTAGAC +
Preference number: 4 (lower is better)
Translates to: KTEVSIHVINGATFLCAFQLQQR*QRRRLD
Trigger: GTCTAATCTTCGCCTTTGCCAACGCTGTTGCAGTTG...GAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp AAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCAGTGTTCCTTTGGGTATaGCTGACTGAGGATCTGCAA +
Preference number: 4 (lower is better)
Translates to: KPKSPYTLSMEQLSCVLSVFLWV*LTEDLQ
Trigger: TTGCAGATCCTCAGTCAGCCATACCCAAAGGAACAC...TGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp TCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGGCTGTGTTCCTTTGGGTATaGCTGACTGAGGATCTGCAA +
Preference number: 4 (lower is better)
Translates to: SLKISVTTLGTEVPFWRAVFLWV*LTEDLQ
Trigger: TTGCAGATCCTCAGTCAGCCATACCCAAAGGAACAC...AGCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp GTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGCTAGGAGTGTTCCTTTaGGTATGGCTGACTGAGGAT +
Preference number: 4 (lower is better)
Translates to: VSLKISVTTLGTEVPFWRLGVFL*VWLTED
Trigger: ATCCTCAGTCAGCCATACCCAAAGGAACACTCCTAG...CCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp ACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTGGACATCTCTTTCATaGCTTGTCTTCGAGGACCCA +
Preference number: 4 (lower is better)
Translates to: TKTEVSIHVINGATFLCAWTSLS*LVFEDP
Trigger: TGGGTCCTCGAAGACAAGCCATGAAAGAGATGTCCA...AGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp CGAACTAGGAGGATTGGTGGTAGGTCCTTAGATAGAGCTTCTAACCATGCCATGATTTGGCTTGATCGATaGACATCTCTTTCATGGCTT +
Preference number: 4 (lower is better)
Translates to: RTRRIGGRSLDRASNHAMIWLDR*TSLSWL
Trigger: AAGCCATGAAAGAGATGTCCATCGATCAAGCCAAAT...CATGGCATGGTTAGAAGCTCTATCTAAGGACCTACCACCAATCCTCCTAGTTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509205.5
CDS-3UTR CCA 90 bp CGAACTAGGAGGATTGGTGGTAGGTCCTTAGATAGAGCTTCTAACCATGCCATGACCTTTTCGTGCAACTaGGAGACTCATGACAATAAT +
Preference number: 4 (lower is better)
Translates to: RTRRIGGRSLDRASNHAMTFSCN*ETHDNN
Trigger: ATTATTGTCATGAGTCTCCCAGTTGCACGAAAAGGT...CATGGCATGGTTAGAAGCTCTATCTAAGGACCTACCACCAATCCTCCTAGTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509205.5
CDS-3UTR TCA 90 bp TTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTTTTCTGCAGTATACGTaGCCACAGCATCTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: LTKTEVSIHVINGATFLCFLQYT*PQHLWL
Trigger: CAACCAGAGATGCTGTGGTCACGTATACTGCAGAAA...ACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp GTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGGTACTAATACACCCTTaGTCCAGCCAAACTTCACGA +
Preference number: 4 (lower is better)
Translates to: VSLKISVTTLGTEVPFWRVLIHP*SSQTSR
Trigger: TCGTGAAGTTTGGCTGGATCAAGGGTGTATTAGTAC...CCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp AAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCAGACCTATTCCAGCTTaGCCCACAATCCATGACAAT +
Preference number: 4 (lower is better)
Translates to: KTEVSIHVINGATFLCAFRPIPA*PTIHDN
Trigger: ATTGTCATGGATTGTGGGTCAAGCTGGAATAGGTCT...GAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp TTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTATCTGCAAGATCACCTaGGATATTTGCTCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LTKTEVSIHVINGATFLCICKIT*DICSSQ
Trigger: CTGGCTGGAGCAAATATCTCAGGTGATCTTGCAGAT...ACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp ATGGAATTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCTCCTTTGGGTATGGCTaGCTGAGGATCTGCAAGATC +
Preference number: 4 (lower is better)
Translates to: MELTKTEVSIHVINGATFSFGYG*LRICKI
Trigger: GATCTTGCAGATCCTCAGTCAGCCATACCCAAAGGA...GAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAATTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp TCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGGCTACATGTTGTAGTATTTaGATGCAGGACGCCATCCTG +
Preference number: 4 (lower is better)
Translates to: SLKISVTTLGTEVPFWRATCCSI*MQDAIL
Trigger: CAGGATGGCGTCCTGCATTCAAATACTACAACATGT...AGCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp GAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCAAATTATACTACACTAGGCACTaGAGTACCATTCTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: EVSIHVINGATFLCAFKLYYTRH*STILEG
Trigger: GCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTA...TAATTTGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp CGAACTAGGAGGATTGGTGGTAGGTCCTTAGATAGAGCTTCTAACCATGCCATGATTGAGATATGGAATTaGCTAAAACCGAAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RTRRIGGRSLDRASNHAMIEIWN*LKPKSP
Trigger: TGGAGACTTCGGTTTTAGTCAATTCCATATCTCAAT...CATGGCATGGTTAGAAGCTCTATCTAAGGACCTACCACCAATCCTCCTAGTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509205.5
CDS-3UTR TCA 90 bp TTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGTCTATCAAGATTCATaGAAACCAGCCAGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: LTKTEVSIHVINGATFLCVYQDS*KPARRS
Trigger: ACTGCGCCTGGCTGGTTTTCATGAATCTTGATAGAC...ACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262461.7
CDS-3UTR GCA 90 bp TTCTACTGTCTTTACCCCCAAACATTGCAAAACCTGCAATGGAACAATGCTGTGGACTCCTTTACTTTCTaGAGTATACGTGACCACAGC +
Preference number: 4 (lower is better)
Translates to: FYCLYPQTLQNLQWNNAVDSFTF*SIRDHS
Trigger: GCTGTGGTCACGTATACTGCAGAAAGTAAAGGAGTC...CACAGCATTGTTCCATTGCAGGTTTTGCAATGTTTGGGGGTAAAGACAGTAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262461.7
CDS-3UTR GCA 90 bp GTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGGACTCCTTTACTTTCTaGAGTATACGTGACCACAGC +
Preference number: 4 (lower is better)
Translates to: VSLKISVTTLGTEVPFWRDSFTF*SIRDHS
Trigger: GCTGTGGTCACGTATACTGCAGAAAGTAAAGGAGTC...CCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp TTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTCACATACATAGCAACTaGAACAGCGTTGGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: LTKTEVSIHVINGATFLCHIHSN*NSVGKG
Trigger: GCCTTTGCCAACGCTGTTGCAGTTGCTATGTATGTG...ACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp TCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGGCTCTCCACCACGGTTTCTaGAAATCCAACCACATACAT +
Preference number: 4 (lower is better)
Translates to: SLKISVTTLGTEVPFWRALHHGF*KSNHIH
Trigger: ATGTATGTGGTTGGATTTGCAGAAACCGTGGTGGAG...AGCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp ACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTAACAATCTGAGCTTTTaGTTCCCACTCCATTCCAGC +
Preference number: 4 (lower is better)
Translates to: TKTEVSIHVINGATFLCANNLSF*FPLHSS
Trigger: GCTGGAATGGAGTGGGAAGCAAAAGCTCAGATTGTT...AGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp AAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCAAACAATCTGAGCTTTTaGTTCCCACTCCATTCCAGC +
Preference number: 4 (lower is better)
Translates to: KPKSPYTLSMEQLSCVLSNNLSF*FPLHSS
Trigger: GCTGGAATGGAGTGGGAAGCAAAAGCTCAGATTGTT...TGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp ATGGAATTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCCAAGACCAGCAGCCTaGATCAAATACTGTGCACCT +
Preference number: 4 (lower is better)
Translates to: MELTKTEVSIHVINGATFPRPAA*IKYCAP
Trigger: AGGTGCACAGTATTTGATGCAGGCTGCTGGTCTTGG...GAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAATTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp GTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGGTTGAGTTGCAGTCTTaGCATCCTCTTCCTCAACTT +
Preference number: 4 (lower is better)
Translates to: VSLKISVTTLGTEVPFWRVELQS*HPLPQL
Trigger: AAGTTGAGGAAGAGGATGGCAAGACTGCAACTCAAC...CCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262461.7
ENST00000509205.5
CDS-3UTR GCA 90 bp ATGGAATTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCACAGCACCTTTTCGTaGAACTGGGAGACTCATGAC +
Preference number: 4 (lower is better)
Translates to: MELTKTEVSIHVINGATFHSTFS*NWETHD
Trigger: GTCATGAGTCTCCCAGTTGCACGAAAAGGTGCTGTG...GAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAATTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp TTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTCAACTGCAACAGCGTTaGCAAAGGCGAAGATTAGAC +
Preference number: 4 (lower is better)
Translates to: LTKTEVSIHVINGATFLCQLQQR*QRRRLD
Trigger: GTCTAATCTTCGCCTTTGCCAACGCTGTTGCAGTTG...ACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp TTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGTGTTCCTTTGGGTATaGCTGACTGAGGATCTGCAA +
Preference number: 4 (lower is better)
Translates to: LTKTEVSIHVINGATFLCVFLWV*LTEDLQ
Trigger: TTGCAGATCCTCAGTCAGCCATACCCAAAGGAACAC...ACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp ACTACACTAGGCACTGAAGTACCATTCTGGAGGGCTGTCCACTGTATAGAACATACCATACTCATTACCTaGAAGTTGTTCATTAGGCCA +
Preference number: 4 (lower is better)
Translates to: TTLGTEVPFWRAVHCIEHTILIT*KLFIRP
Trigger: TGGCCTAATGAACAACTTCCAGGTAATGAGTATGGT...ATGTTCTATACAGTGGACAGCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp AAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCAGAGCCTGAAATATTTTaGGAGCACTCACTAGGGATG +
Preference number: 4 (lower is better)
Translates to: KPKSPYTLSMEQLSCVLSEPEIF*EHSLGM
Trigger: CATCCCTAGTGAGTGCTCCCAAAATATTTCAGGCTC...TGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp ACTAGACACAGCACCTTTTCGTGCAACTGGGAGACTCATGACAATAATATTAGCGAGCCTGAAATATTTTaGGAGCACTCACTAGGGATG +
Preference number: 4 (lower is better)
Translates to: TRHSTFSCNWETHDNNISEPEIF*EHSLGM
Trigger: CATCCCTAGTGAGTGCTCCCAAAATATTTCAGGCTC...GCTAATATTATTGTCATGAGTCTCCCAGTTGCACGAAAAGGTGCTGTGTCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509205.5
CDS-3UTR CCA 90 bp AAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCGGACCCATATGTACATaGCCACAGATCATCAAACCA +
Preference number: 4 (lower is better)
Translates to: KTEVSIHVINGATFLCAFGPICT*PQIIKP
Trigger: TGGTTTGATGATCTGTGGCCATGTACATATGGGTCC...GAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp ACTAGACACAGCACCTTTTCGTGCAACTGGGAGACTCATGACAATAATATTAGCGGACCCATATGTACATaGCCACAGATCATCAAACCA +
Preference number: 4 (lower is better)
Translates to: TRHSTFSCNWETHDNNISGPICT*PQIIKP
Trigger: TGGTTTGATGATCTGTGGCCATGTACATATGGGTCC...GCTAATATTATTGTCATGAGTCTCCCAGTTGCACGAAAAGGTGCTGTGTCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509205.5
CDS-3UTR CCA 90 bp AAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCGCCATCGCTGATATTTaGCTTGATCGATGGACATCT +
Preference number: 4 (lower is better)
Translates to: KTEVSIHVINGATFLCAFAIADI*LDRWTS
Trigger: AGATGTCCATCGATCAAGCCAAATATCAGCGATGGC...GAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp AAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCAAAGGACAAGTGTGTTTaGCTTCATACGACCAAGACC +
Preference number: 4 (lower is better)
Translates to: KPKSPYTLSMEQLSCVLSKDKCV*LHTTKT
Trigger: GGTCTTGGTCGTATGAAGCCAAACACACTTGTCCTT...TGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp ACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTAAGGACAAGTGTGTTTaGCTTCATACGACCAAGACC +
Preference number: 4 (lower is better)
Translates to: TKTEVSIHVINGATFLCAKDKCV*LHTTKT
Trigger: GGTCTTGGTCGTATGAAGCCAAACACACTTGTCCTT...AGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp GTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGACTGAAGTACCATTCTaGAGGGCTGTCCACTGTATA +
Preference number: 4 (lower is better)
Translates to: VSLKISVTTLGTEVPFWRTEVPF*RAVHCI
Trigger: TATACAGTGGACAGCCCTCCAGAATGGTACTTCAGT...CCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp AATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGATCTGCAAGATCACCTaGGATATTTGCTCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: NVSLKISVTTLGTEVPFWICKIT*DICSSQ
Trigger: CTGGCTGGAGCAAATATCTCAGGTGATCTTGCAGAT...CCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp TCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGGCTTCCTTACATAGAGCCTaGAATATTTTGGGAGCACTC +
Preference number: 4 (lower is better)
Translates to: SLKISVTTLGTEVPFWRASLHRA*NILGAL
Trigger: GAGTGCTCCCAAAATATTTCAGGCTCTATGTAAGGA...AGCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp TTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTACATGTTGTAGTATTTaGATGCAGGACGCCATCCTG +
Preference number: 4 (lower is better)
Translates to: LTKTEVSIHVINGATFLCTCCSI*MQDAIL
Trigger: CAGGATGGCGTCCTGCATTCAAATACTACAACATGT...ACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp ACTACACTAGGCACTGAAGTACCATTCTGGAGGGCTGTCCACTGTATAGAACATTCTTTATCATCTTCATaGAGTCTGTATGGCTCAATG +
Preference number: 4 (lower is better)
Translates to: TTLGTEVPFWRAVHCIEHSLSSS*SLYGSM
Trigger: CATTGAGCCATACAGACTTCATGAAGATGATAAAGA...ATGTTCTATACAGTGGACAGCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp ACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTAGCATGCCCTTCAAATaGTCACCTTTGTTCTCTATG +
Preference number: 4 (lower is better)
Translates to: TKTEVSIHVINGATFLCASMPFK*SPLFSM
Trigger: CATAGAGAACAAAGGTGATCATTTGAAGGGCATGCT...AGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262461.7
ENST00000343225.4
CDS-3UTR TCA 90 bp AAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCAAGCATGCCCTTCAAATaGTCACCTTTGTTCTCTATG +
Preference number: 4 (lower is better)
Translates to: KPKSPYTLSMEQLSCVLSSMPFK*SPLFSM
Trigger: CATAGAGAACAAAGGTGATCATTTGAAGGGCATGCT...TGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262461.7
ENST00000343225.4
CDS-3UTR TCA 90 bp GTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGCACATGTATGACGCATaGCATTTGGTTCCTGTAGTA +
Preference number: 4 (lower is better)
Translates to: VSLKISVTTLGTEVPFWRHMYDA*HLVPVV
Trigger: TACTACAGGAACCAAATGTCATGCGTCATACATGTG...CCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262461.7
CDS-3UTR TCA 90 bp GTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGTTATACCCACATGTATaGCGCATGACATTTGGTTCC +
Preference number: 4 (lower is better)
Translates to: VSLKISVTTLGTEVPFWRLYPHV*RMTFGS
Trigger: GGAACCAAATGTCATGCGTCATACATGTGGGTATAA...CCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262461.7
CDS-3UTR GCA 90 bp ATGGAATTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCACATACATAGCAACTaGAACAGCGTTGGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: MELTKTEVSIHVINGATFHIHSN*NSVGKG
Trigger: GCCTTTGCCAACGCTGTTGCAGTTGCTATGTATGTG...GAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAATTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp ATGGAATTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTACCACATCCTTGGTaGCAGGAGATTTCTCTTGTG +
Preference number: 4 (lower is better)
Translates to: MELTKTEVSIHVINGATFLPHPW*QEISLV
Trigger: CACAAGAGAAATCTCCTGGCACCAAGGATGTGGTAG...GAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAATTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp TTCTACTGTCTTTACCCCCAAACATTGCAAAACCTGCAATGGAACAATGCTGTGGCAGGTAGTAGGTGTTaGTGTGGGTATCATAATAGT +
Preference number: 4 (lower is better)
Translates to: FYCLYPQTLQNLQWNNAVAGSRC*CGYHNS
Trigger: ACTATTATGATACCCACACCAACACCTACTACCTGC...CACAGCATTGTTCCATTGCAGGTTTTGCAATGTTTGGGGGTAAAGACAGTAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262461.7
CDS-3UTR CCA 90 bp AAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCAGCAGGTAGTAGGTGTTaGTGTGGGTATCATAATAGT +
Preference number: 4 (lower is better)
Translates to: KPKSPYTLSMEQLSCVLSAGSRC*CGYHNS
Trigger: ACTATTATGATACCCACACCAACACCTACTACCTGC...TGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp AAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCCTTCTTGCTCTCCAGTaGGATAAATGTTCCTATGAC +
Preference number: 4 (lower is better)
Translates to: KTEVSIHVINGATFLCAFLLALQ*DKCSYD
Trigger: GTCATAGGAACATTTATCCCACTGGAGAGCAAGAAG...GAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp GAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCAAATTACTAGGAGTGTTCCTTTaGGTATGGCTGACTGAGGAT +
Preference number: 4 (lower is better)
Translates to: EVSIHVINGATFLCAFKLLGVFL*VWLTED
Trigger: ATCCTCAGTCAGCCATACCCAAAGGAACACTCCTAG...TAATTTGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp TTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCCATCGCTGATATTTaGCTTGATCGATGGACATCT +
Preference number: 4 (lower is better)
Translates to: LTKTEVSIHVINGATFLCAIADI*LDRWTS
Trigger: AGATGTCCATCGATCAAGCCAAATATCAGCGATGGC...ACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp TTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTAAGGACAAGTGTGTTTaGCTTCATACGACCAAGACC +
Preference number: 4 (lower is better)
Translates to: LTKTEVSIHVINGATFLCKDKCV*LHTTKT
Trigger: GGTCTTGGTCGTATGAAGCCAAACACACTTGTCCTT...ACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp CATTGTGATGTTAATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAATACTGCATTCCAGCGTaGCAACAGAGCAAGACTCCG +
Preference number: 4 (lower is better)
Translates to: HCDVNVSLKISVTTLGTEYCIPA*QQSKTP
Trigger: CGGAGTCTTGCTCTGTTGCCACGCTGGAATGCAGTA...TTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATTAACATCACAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262461.7
ENST00000343225.4
CDS-3UTR TCA 90 bp AATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGGTACTAATACACCCTTaGTCCAGCCAAACTTCACGA +
Preference number: 4 (lower is better)
Translates to: NVSLKISVTTLGTEVPFWVLIHP*SSQTSR
Trigger: TCGTGAAGTTTGGCTGGATCAAGGGTGTATTAGTAC...CCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp ATGGAATTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCTTTTTCAACAGTGGTTaGGTTGCAGTCTTGCCATCC +
Preference number: 4 (lower is better)
Translates to: MELTKTEVSIHVINGATFFFNSG*VAVLPS
Trigger: GGATGGCAAGACTGCAACTCAACCACTGTTGAAAAA...GAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAATTCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262461.7
ENST00000509205.5
CDS-3UTR TCA 90 bp GAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCAAATTATTTTTCAACAGTGGTTaGGTTGCAGTCTTGCCATCC +
Preference number: 4 (lower is better)
Translates to: EVSIHVINGATFLCAFKLFFNSG*VAVLPS
Trigger: GGATGGCAAGACTGCAACTCAACCACTGTTGAAAAA...TAATTTGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262461.7
ENST00000509205.5
CDS-3UTR TCA 90 bp TTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTATAACTCATTTAACCTaGTCTGCCGGTATGTCTTGG +
Preference number: 4 (lower is better)
Translates to: LTKTEVSIHVINGATFLCITHLT*SAGMSW
Trigger: CCAAGACATACCGGCAGATCAGGTTAAATGAGTTAT...ACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262461.7
ENST00000343225.4
CDS-3UTR TCA 90 bp AAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCAACTGGAAAATTGTGTaGAATTACAGCATGCCCTTC +
Preference number: 4 (lower is better)
Translates to: KTEVSIHVINGATFLCAFNWKIV*NYSMPF
Trigger: GAAGGGCATGCTGTAATTTCACACAATTTTCCAGTT...GAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262461.7
ENST00000343225.4
CDS-3UTR TCA 90 bp ACTAGACACAGCACCTTTTCGTGCAACTGGGAGACTCATGACAATAATATTAGCATAACTCATTTAACCTaGTCTGCCGGTATGTCTGAA +
Preference number: 4 (lower is better)
Translates to: TRHSTFSCNWETHDNNISITHLT*SAGMSE
Trigger: TTCAGACATACCGGCAGATCAGGTTAAATGAGTTAT...GCTAATATTATTGTCATGAGTCTCCCAGTTGCACGAAAAGGTGCTGTGTCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509205.5
CDS-3UTR GCA 90 bp TTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTACTTTCTTCCCCATTTaGAAAGCCATCCTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: LTKTEVSIHVINGATFLCTFFPI*KAILKR
Trigger: CCTTTTGAGGATGGCTTTGCAAATGGGGAAGAAAGT...ACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp GAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCAAATTAGACTCCTTTACTTTCTaGAGTATACGTGACCACAGC +
Preference number: 4 (lower is better)
Translates to: EVSIHVINGATFLCAFKLDSFTF*SIRDHS
Trigger: GCTGTGGTCACGTATACTGCAGAAAGTAAAGGAGTC...TAATTTGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp CATTGTGATGTTAATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAACCAAGACCAGCAGCCTaGATCAAATACTGTGCACCT +
Preference number: 4 (lower is better)
Translates to: HCDVNVSLKISVTTLGTEPRPAA*IKYCAP
Trigger: AGGTGCACAGTATTTGATGCAGGCTGCTGGTCTTGG...TTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATTAACATCACAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp AAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCCACATCCCTCATATCTaGTTGCAACCAATCTTTCTT +
Preference number: 4 (lower is better)
Translates to: KTEVSIHVINGATFLCAFHIPHI*LQPIFL
Trigger: AAGAAAGATTGGTTGCAAGCAGATATGAGGGATGTG...GAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp AATCGTGAAAGAAAAGTCACCATTCGCCATTGTGATGTTAATGTGTCATTGAAGCAACAGTGGTTGAGTTaGAGTCTTGCCATCCTCTTC +
Preference number: 4 (lower is better)
Translates to: NRERKVTIRHCDVNVSLKQQWLS*SLAILF
Trigger: GAAGAGGATGGCAAGACTGCAACTCAACCACTGTTG...CTTCAATGACACATTAACATCACAATGGCGAATGGTGACTTTTCTTTCACGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262461.7
ENST00000509205.5
CDS-3UTR GCA 90 bp CATTGTGATGTTAATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAACACAGCACCTTTTCGTaGAACTGGGAGACTCATGAC +
Preference number: 4 (lower is better)
Translates to: HCDVNVSLKISVTTLGTEHSTFS*NWETHD
Trigger: GTCATGAGTCTCCCAGTTGCACGAAAAGGTGCTGTG...TTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATTAACATCACAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp ACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTGGATTCGTGAAAACCTaGATAAATTTTCCACCACAG +
Preference number: 4 (lower is better)
Translates to: TKTEVSIHVINGATFLCAGFVKT*INFPPQ
Trigger: CTGTGGTGGAAAATTTATGCAGGTTTTCACGAATCC...AGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262461.7
ENST00000343225.4
CDS-3UTR CCA 90 bp GTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGACCATACTCATTACCTaGAAGTTGTTCATTAGGCCA +
Preference number: 4 (lower is better)
Translates to: VSLKISVTTLGTEVPFWRTILIT*KLFIRP
Trigger: TGGCCTAATGAACAACTTCCAGGTAATGAGTATGGT...CCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp AAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCACATAACAAGACACTGTaGCCTAAAGTTTTTCACGTG +
Preference number: 4 (lower is better)
Translates to: KPKSPYTLSMEQLSCVLSHNKTL*PKVFHV
Trigger: CACGTGAAAAACTTTAGGCCACAGTGTCTTGTTATG...TGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp GAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCAAATTAGGACCCATATGTACATaGCCACAGATCATCAAACCA +
Preference number: 4 (lower is better)
Translates to: EVSIHVINGATFLCAFKLGPICT*PQIIKP
Trigger: TGGTTTGATGATCTGTGGCCATGTACATATGGGTCC...TAATTTGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp AATCGTGAAAGAAAAGTCACCATTCGCCATTGTGATGTTAATGTGTCATTGAAGTGGACATCTCTTTCATaGCTTGTCTTCGAGGACCCA +
Preference number: 4 (lower is better)
Translates to: NRERKVTIRHCDVNVSLKWTSLS*LVFEDP
Trigger: TGGGTCCTCGAAGACAAGCCATGAAAGAGATGTCCA...CTTCAATGACACATTAACATCACAATGGCGAATGGTGACTTTTCTTTCACGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp GTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGGTCATCTGCATGTACTaGAGCATAAAATGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: VSLKISVTTLGTEVPFWRVICMY*SIKCLH
Trigger: ATGAAGGCATTTTATGCTCCAGTACATGCAGATGAC...CCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp AAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCGTCATCTGCATGTACTaGAGCATAAAATGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: KTEVSIHVINGATFLCAFVICMY*SIKCLH
Trigger: ATGAAGGCATTTTATGCTCCAGTACATGCAGATGAC...GAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp GTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGATCGCTCTCCGGTCATaGTCTATTCTGTTTATCTTT +
Preference number: 4 (lower is better)
Translates to: VSLKISVTTLGTEVPFWRIALRS*SILFIF
Trigger: AAAGATAAACAGAATAGACCATGACCGGAGAGCGAT...CCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp ACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTATCGCTCTCCGGTCATaGTCTATTCTGTTTATCTTT +
Preference number: 4 (lower is better)
Translates to: TKTEVSIHVINGATFLCAIALRS*SILFIF
Trigger: AAAGATAAACAGAATAGACCATGACCGGAGAGCGAT...AGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp TCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGGCTTCTGCCGGTATGTCTTaGTCTTATAAAGTTCAAGCT +
Preference number: 4 (lower is better)
Translates to: SLKISVTTLGTEVPFWRASAGMS*SYKVQA
Trigger: AGCTTGAACTTTATAAGACCAAGACATACCGGCAGA...AGCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262461.7
ENST00000343225.4
CDS-3UTR CCA 90 bp ACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTACCTTTTCGTGCAACTaGGAGACTCATGACAATAAT +
Preference number: 4 (lower is better)
Translates to: TKTEVSIHVINGATFLCATFSCN*ETHDNN
Trigger: ATTATTGTCATGAGTCTCCCAGTTGCACGAAAAGGT...AGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp GAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCAAATTAACTGAAGTACCATTCTaGAGGGCTGTCCACTGTATA +
Preference number: 4 (lower is better)
Translates to: EVSIHVINGATFLCAFKLTEVPF*RAVHCI
Trigger: TATACAGTGGACAGCCCTCCAGAATGGTACTTCAGT...TAATTTGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp CATTGTGATGTTAATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAATTTCTGCAGTATACGTaGCCACAGCATCTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: HCDVNVSLKISVTTLGTEFLQYT*PQHLWL
Trigger: CAACCAGAGATGCTGTGGTCACGTATACTGCAGAAA...TTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATTAACATCACAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp TTCTACTGTCTTTACCCCCAAACATTGCAAAACCTGCAATGGAACAATGCTGTGTTGACCCACAATCCATaGCAATCTAATGAAAAGCAT +
Preference number: 4 (lower is better)
Translates to: FYCLYPQTLQNLQWNNAVLTHNP*QSNEKH
Trigger: ATGCTTTTCATTAGATTGTCATGGATTGTGGGTCAA...CACAGCATTGTTCCATTGCAGGTTTTGCAATGTTTGGGGGTAAAGACAGTAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262461.7
CDS-3UTR TCA 90 bp AATCGTGAAAGAAAAGTCACCATTCGCCATTGTGATGTTAATGTGTCATTGAAGAGACCTATTCCAGCTTaGCCCACAATCCATGACAAT +
Preference number: 4 (lower is better)
Translates to: NRERKVTIRHCDVNVSLKRPIPA*PTIHDN
Trigger: ATTGTCATGGATTGTGGGTCAAGCTGGAATAGGTCT...CTTCAATGACACATTAACATCACAATGGCGAATGGTGACTTTTCTTTCACGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp GAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCAAATTATCCTTACATAGAGCCTaGAATATTTTGGGAGCACTC +
Preference number: 4 (lower is better)
Translates to: EVSIHVINGATFLCAFKLSLHRA*NILGAL
Trigger: GAGTGCTCCCAAAATATTTCAGGCTCTATGTAAGGA...TAATTTGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp AAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCTGCAAGGAAGAAGTTTaGGATAATTGGTGCAATAAC +
Preference number: 4 (lower is better)
Translates to: KTEVSIHVINGATFLCAFCKEEV*DNWCNN
Trigger: GTTATTGCACCAATTATCTCAAACTTCTTCCTTGCA...GAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp AATCGTGAAAGAAAAGTCACCATTCGCCATTGTGATGTTAATGTGTCATTGAAGACATGTTGTAGTATTTaGATGCAGGACGCCATCCTG +
Preference number: 4 (lower is better)
Translates to: NRERKVTIRHCDVNVSLKTCCSI*MQDAIL
Trigger: CAGGATGGCGTCCTGCATTCAAATACTACAACATGT...CTTCAATGACACATTAACATCACAATGGCGAATGGTGACTTTTCTTTCACGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp AAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCTATCTCCTAGAACCATaGTATCAGAAAAGTCTATCC +
Preference number: 4 (lower is better)
Translates to: KTEVSIHVINGATFLCAFYLLEP*YQKSLS
Trigger: GGATAGACTTTTCTGATATCATGGTTCTAGGAGATA...GAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp ACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTCACCTTTGTTCTCTATaGAACCTGTATCTGTTAATC +
Preference number: 4 (lower is better)
Translates to: TKTEVSIHVINGATFLCAHLCSL*NLYLLI
Trigger: GATTAACAGATACAGGTTTCATAGAGAACAAAGGTG...AGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262461.7
ENST00000343225.4
CDS-3UTR GCA 90 bp TTCTACTGTCTTTACCCCCAAACATTGCAAAACCTGCAATGGAACAATGCTGTGAGAACCTACAGATACTaGAATTCCTACGTAAACCAA +
Preference number: 4 (lower is better)
Translates to: FYCLYPQTLQNLQWNNAVRTYRY*NSYVNQ
Trigger: TTGGTTTACGTAGGAATTGCAGTATCTGTAGGTTCT...CACAGCATTGTTCCATTGCAGGTTTTGCAATGTTTGGGGGTAAAGACAGTAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262461.7
CDS-3UTR GCA 90 bp ACTAGACACAGCACCTTTTCGTGCAACTGGGAGACTCATGACAATAATATTAGCAGAACCTACAGATACTaGAATTCCTACGTAAACCAA +
Preference number: 4 (lower is better)
Translates to: TRHSTFSCNWETHDNNISRTYRY*NSYVNQ
Trigger: TTGGTTTACGTAGGAATTGCAGTATCTGTAGGTTCT...GCTAATATTATTGTCATGAGTCTCCCAGTTGCACGAAAAGGTGCTGTGTCTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509205.5
CDS-3UTR GCA 90 bp AATCGTGAAAGAAAAGTCACCATTCGCCATTGTGATGTTAATGTGTCATTGAAGGTTGTAGTATTTGAATaGAGGACGCCATCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: NRERKVTIRHCDVNVSLKVVVFE*RTPSWR
Trigger: TCTCCAGGATGGCGTCCTGCATTCAAATACTACAAC...CTTCAATGACACATTAACATCACAATGGCGAATGGTGACTTTTCTTTCACGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp TTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTCACATCCCTCATATCTaGTTGCAACCAATCTTTCTT +
Preference number: 4 (lower is better)
Translates to: LTKTEVSIHVINGATFLCHIPHI*LQPIFL
Trigger: AAGAAAGATTGGTTGCAAGCAGATATGAGGGATGTG...ACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp AAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCTGTGAAATTACAGCATaGCCTTCAAATGATCACCTT +
Preference number: 4 (lower is better)
Translates to: KTEVSIHVINGATFLCAFCEITA*PSNDHL
Trigger: AAGGTGATCATTTGAAGGGCATGCTGTAATTTCACA...GAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262461.7
ENST00000343225.4
CDS-3UTR GCA 90 bp GTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGTGTGAAATTACAGCATaGCCTTCAAATGATCACCTT +
Preference number: 4 (lower is better)
Translates to: VSLKISVTTLGTEVPFWRCEITA*PSNDHL
Trigger: AAGGTGATCATTTGAAGGGCATGCTGTAATTTCACA...CCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262461.7
ENST00000343225.4
CDS-3UTR GCA 90 bp AAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCACTCATGAAGCAAAAATaGTGCACACCACTGAAAATA +
Preference number: 4 (lower is better)
Translates to: KPKSPYTLSMEQLSCVLSLMKQK*CTPLKI
Trigger: TATTTTCAGTGGTGTGCAGCATTTTTGCTTCATGAG...TGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262461.7
CDS-3UTR GCA 90 bp GAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCAAATTAGCAGCACTCAGTCCATaGCCTATTATCCATCTTAAA +
Preference number: 4 (lower is better)
Translates to: EVSIHVINGATFLCAFKLAALSP*PIIHLK
Trigger: TTTAAGATGGATAATAGGGCATGGACTGAGTGCTGC...TAATTTGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262461.7
CDS-3UTR GCA 90 bp GTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGATCCACTTCCTTTATTaGAGTAACCTCTGTACAAAG +
Preference number: 4 (lower is better)
Translates to: VSLKISVTTLGTEVPFWRIHFLY*SNLCTK
Trigger: CTTTGTACAGAGGTTACTGCAATAAAGGAAGTGGAT...CCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262461.7
CDS-3UTR CCA 90 bp ATGGAATTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCGCAGGTAGTAGGTGTTaGTGTGGGTATCATAATAGT +
Preference number: 4 (lower is better)
Translates to: MELTKTEVSIHVINGATFAGSRC*CGYHNS
Trigger: ACTATTATGATACCCACACCAACACCTACTACCTGC...GAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAATTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp CATTGTGATGTTAATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAACAACTGCAACAGCGTTaGCAAAGGCGAAGATTAGAC +
Preference number: 4 (lower is better)
Translates to: HCDVNVSLKISVTTLGTEQLQQR*QRRRLD
Trigger: GTCTAATCTTCGCCTTTGCCAACGCTGTTGCAGTTG...TTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATTAACATCACAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp AATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGCTTCTTGCTCTCCAGTaGGATAAATGTTCCTATGAC +
Preference number: 4 (lower is better)
Translates to: NVSLKISVTTLGTEVPFWLLALQ*DKCSYD
Trigger: GTCATAGGAACATTTATCCCACTGGAGAGCAAGAAG...CCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp CATTGTGATGTTAATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAACTAGGAGTGTTCCTTTaGGTATGGCTGACTGAGGAT +
Preference number: 4 (lower is better)
Translates to: HCDVNVSLKISVTTLGTELGVFL*VWLTED
Trigger: ATCCTCAGTCAGCCATACCCAAAGGAACACTCCTAG...TTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATTAACATCACAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp TTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTATTTGGCTTGATCGATaGACATCTCTTTCATGGCTT +
Preference number: 4 (lower is better)
Translates to: LTKTEVSIHVINGATFLCIWLDR*TSLSWL
Trigger: AAGCCATGAAAGAGATGTCCATCGATCAAGCCAAAT...ACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp GAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCAAATTATTACTACCACATCCTTaGTGCCAGGAGATTTCTCTT +
Preference number: 4 (lower is better)
Translates to: EVSIHVINGATFLCAFKLLLPHP*CQEISL
Trigger: AAGAGAAATCTCCTGGCACCAAGGATGTGGTAGTAA...TAATTTGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp TTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTATCGCTCTCCGGTCATaGTCTATTCTGTTTATCTTT +
Preference number: 4 (lower is better)
Translates to: LTKTEVSIHVINGATFLCIALRS*SILFIF
Trigger: AAAGATAAACAGAATAGACCATGACCGGAGAGCGAT...ACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp TTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTTCTGCCGGTATGTCTTaGTCTTATAAAGTTCAAGCT +
Preference number: 4 (lower is better)
Translates to: LTKTEVSIHVINGATFLCSAGMS*SYKVQA
Trigger: AGCTTGAACTTTATAAGACCAAGACATACCGGCAGA...ACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262461.7
ENST00000343225.4
CDS-3UTR TCA 90 bp CATTGTGATGTTAATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAAGACCTATTCCAGCTTaGCCCACAATCCATGACAAT +
Preference number: 4 (lower is better)
Translates to: HCDVNVSLKISVTTLGTERPIPA*PTIHDN
Trigger: ATTGTCATGGATTGTGGGTCAAGCTGGAATAGGTCT...TTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATTAACATCACAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp TTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTTGCAAGGAAGAAGTTTaGGATAATTGGTGCAATAAC +
Preference number: 4 (lower is better)
Translates to: LTKTEVSIHVINGATFLCCKEEV*DNWCNN
Trigger: GTTATTGCACCAATTATCTCAAACTTCTTCCTTGCA...ACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp CATTGTGATGTTAATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAACCGGTATGTCTGAAATaGAACAGGACAGTCATTCCT +
Preference number: 4 (lower is better)
Translates to: HCDVNVSLKISVTTLGTEPVCLK*NRTVIP
Trigger: AGGAATGACTGTCCTGTTTCATTTCAGACATACCGG...TTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATTAACATCACAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509205.5
CDS-3UTR GCA 90 bp ACTCATGAAGCAAAAATGCTGCACACCACTGAAAATAATAACGTTATAGATGTCAACAATCTGAGCTTTTaGTTCCCACTCCATTCCAGC +
Preference number: 4 (lower is better)
Translates to: THEAKMLHTTENNNVIDVNNLSF*FPLHSS
Trigger: GCTGGAATGGAGTGGGAAGCAAAAGCTCAGATTGTT...GACATCTATAACGTTATTATTTTCAGTGGTGTGCAGCATTTTTGCTTCATGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262461.7
CDS-3UTR GCA 90 bp CATTGTGATGTTAATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTTGTAGTATTTGAATaGAGGACGCCATCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: HCDVNVSLKISVTTLGTEVVVFE*RTPSWR
Trigger: TCTCCAGGATGGCGTCCTGCATTCAAATACTACAAC...TTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATTAACATCACAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp TCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGGCTTCCCTCATATCTGCTTaGAACCAATCTTTCTTAAAT +
Preference number: 4 (lower is better)
Translates to: SLKISVTTLGTEVPFWRASLISA*NQSFLN
Trigger: ATTTAAGAAAGATTGGTTGCAAGCAGATATGAGGGA...AGCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp ACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTCCCTCATATCTGCTTaGAACCAATCTTTCTTAAAT +
Preference number: 4 (lower is better)
Translates to: TKTEVSIHVINGATFLCASLISA*NQSFLN
Trigger: ATTTAAGAAAGATTGGTTGCAAGCAGATATGAGGGA...AGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp ATGGAATTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCATTTGGCTTGATCGATaGACATCTCTTTCATGGCTT +
Preference number: 4 (lower is better)
Translates to: MELTKTEVSIHVINGATFIWLDR*TSLSWL
Trigger: AAGCCATGAAAGAGATGTCCATCGATCAAGCCAAAT...GAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAATTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp AATCGTGAAAGAAAAGTCACCATTCGCCATTGTGATGTTAATGTGTCATTGAAGTTACTACCACATCCTTaGTGCCAGGAGATTTCTCTT +
Preference number: 4 (lower is better)
Translates to: NRERKVTIRHCDVNVSLKLLPHP*CQEISL
Trigger: AAGAGAAATCTCCTGGCACCAAGGATGTGGTAGTAA...CTTCAATGACACATTAACATCACAATGGCGAATGGTGACTTTTCTTTCACGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp TCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGGCTTTCATGAAGTCTGTATaGCTCAATGATTTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: SLKISVTTLGTEVPFWRAFMKSV*LNDFLK
Trigger: TTTGAGGAAATCATTGAGCCATACAGACTTCATGAA...AGCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp ATGGAATTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCACCTTTTCGTGCAACTaGGAGACTCATGACAATAAT +
Preference number: 4 (lower is better)
Translates to: MELTKTEVSIHVINGATFTFSCN*ETHDNN
Trigger: ATTATTGTCATGAGTCTCCCAGTTGCACGAAAAGGT...GAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAATTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp GGGAGACTCATGACAATAATATTAGCTGTGCTTGAATGTTCCTTTAATAACTCATCCTTACATAGAGCCTaGAATATTTTGGGAGCACTC +
Preference number: 4 (lower is better)
Translates to: GRLMTIILAVLECSFNNSSLHRA*NILGAL
Trigger: GAGTGCTCCCAAAATATTTCAGGCTCTATGTAAGGA...TGAGTTATTAAAGGAACATTCAAGCACAGCTAATATTATTGTCATGAGTCTCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509205.5
CDS-3UTR TCA 90 bp AATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAATTGCTCCAAGAAGTaGTATCCACATGTTGTAGTA +
Preference number: 4 (lower is better)
Translates to: NVSLKISVTTLGTEVPFWNCSKK*YPHVVV
Trigger: TACTACAACATGTGGATATCACTTCTTGGAGCAATT...CCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp AATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGTCTTTATCATCTTCATaGAGTCTGTATGGCTCAATG +
Preference number: 4 (lower is better)
Translates to: NVSLKISVTTLGTEVPFWSLSSS*SLYGSM
Trigger: CATTGAGCCATACAGACTTCATGAAGATGATAAAGA...CCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp ACTCATGAAGCAAAAATGCTGCACACCACTGAAAATAATAACGTTATAGATGTCATAACTCATTTAACCTaGTCTGCCGGTATGTCTTGG +
Preference number: 4 (lower is better)
Translates to: THEAKMLHTTENNNVIDVITHLT*SAGMSW
Trigger: CCAAGACATACCGGCAGATCAGGTTAAATGAGTTAT...GACATCTATAACGTTATTATTTTCAGTGGTGTGCAGCATTTTTGCTTCATGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262461.7
CDS-3UTR GCA 90 bp CATTGTGATGTTAATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAACTTTCTTCCCCATTTaGAAAGCCATCCTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: HCDVNVSLKISVTTLGTETFFPI*KAILKR
Trigger: CCTTTTGAGGATGGCTTTGCAAATGGGGAAGAAAGT...TTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATTAACATCACAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp ACTCATGAAGCAAAAATGCTGCACACCACTGAAAATAATAACGTTATAGATGTCCTTCTTGCTCTCCAGTaGGATAAATGTTCCTATGAC +
Preference number: 4 (lower is better)
Translates to: THEAKMLHTTENNNVIDVLLALQ*DKCSYD
Trigger: GTCATAGGAACATTTATCCCACTGGAGAGCAAGAAG...GACATCTATAACGTTATTATTTTCAGTGGTGTGCAGCATTTTTGCTTCATGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262461.7
CDS-3UTR CCA 90 bp AATCGTGAAAGAAAAGTCACCATTCGCCATTGTGATGTTAATGTGTCATTGAAGACCATACTCATTACCTaGAAGTTGTTCATTAGGCCA +
Preference number: 4 (lower is better)
Translates to: NRERKVTIRHCDVNVSLKTILIT*KLFIRP
Trigger: TGGCCTAATGAACAACTTCCAGGTAATGAGTATGGT...CTTCAATGACACATTAACATCACAATGGCGAATGGTGACTTTTCTTTCACGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CCA 90 bp AATCGTGAAAGAAAAGTCACCATTCGCCATTGTGATGTTAATGTGTCATTGAAGGTCATCTGCATGTACTaGAGCATAAAATGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: NRERKVTIRHCDVNVSLKVICMY*SIKCLH
Trigger: ATGAAGGCATTTTATGCTCCAGTACATGCAGATGAC...CTTCAATGACACATTAACATCACAATGGCGAATGGTGACTTTTCTTTCACGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp AATCGTGAAAGAAAAGTCACCATTCGCCATTGTGATGTTAATGTGTCATTGAAGTTGACCCACAATCCATaGCAATCTAATGAAAAGCAT +
Preference number: 4 (lower is better)
Translates to: NRERKVTIRHCDVNVSLKLTHNP*QSNEKH
Trigger: ATGCTTTTCATTAGATTGTCATGGATTGTGGGTCAA...CTTCAATGACACATTAACATCACAATGGCGAATGGTGACTTTTCTTTCACGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp AATCGTGAAAGAAAAGTCACCATTCGCCATTGTGATGTTAATGTGTCATTGAAGTATCTCCTAGAACCATaGTATCAGAAAAGTCTATCC +
Preference number: 4 (lower is better)
Translates to: NRERKVTIRHCDVNVSLKYLLEP*YQKSLS
Trigger: GGATAGACTTTTCTGATATCATGGTTCTAGGAGATA...CTTCAATGACACATTAACATCACAATGGCGAATGGTGACTTTTCTTTCACGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp ACTCATGAAGCAAAAATGCTGCACACCACTGAAAATAATAACGTTATAGATGTCAACTGGAAAATTGTGTaGAATTACAGCATGCCCTTC +
Preference number: 4 (lower is better)
Translates to: THEAKMLHTTENNNVIDVNWKIV*NYSMPF
Trigger: GAAGGGCATGCTGTAATTTCACACAATTTTCCAGTT...GACATCTATAACGTTATTATTTTCAGTGGTGTGCAGCATTTTTGCTTCATGAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262461.7
CDS-3UTR GCA 90 bp AATCGTGAAAGAAAAGTCACCATTCGCCATTGTGATGTTAATGTGTCATTGAAGAGAACCTACAGATACTaGAATTCCTACGTAAACCAA +
Preference number: 4 (lower is better)
Translates to: NRERKVTIRHCDVNVSLKRTYRY*NSYVNQ
Trigger: TTGGTTTACGTAGGAATTGCAGTATCTGTAGGTTCT...CTTCAATGACACATTAACATCACAATGGCGAATGGTGACTTTTCTTTCACGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp AATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGCATAGGAACAAGGACTaGTTTCACAAGATGAAAAAT +
Preference number: 4 (lower is better)
Translates to: NVSLKISVTTLGTEVPFWHRNKD*FHKMKN
Trigger: ATTTTTCATCTTGTGAAAGCAGTCCTTGTTCCTATG...CCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp AATCGTGAAAGAAAAGTCACCATTCGCCATTGTGATGTTAATGTGTCATTGAAGTTCTCTCAAGTCATCTaGATGTACTGGAGCATAAAA +
Preference number: 4 (lower is better)
Translates to: NRERKVTIRHCDVNVSLKFSQVI*MYWSIK
Trigger: TTTTATGCTCCAGTACATGCAGATGACTTGAGAGAA...CTTCAATGACACATTAACATCACAATGGCGAATGGTGACTTTTCTTTCACGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp ATGGAATTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCTCCCTCATATCTGCTTaGAACCAATCTTTCTTAAAT +
Preference number: 4 (lower is better)
Translates to: MELTKTEVSIHVINGATFSLISA*NQSFLN
Trigger: ATTTAAGAAAGATTGGTTGCAAGCAGATATGAGGGA...GAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAATTCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp ACTCATGAAGCAAAAATGCTGCACACCACTGAAAATAATAACGTTATAGATGTCGGATTCGTGAAAACCTaGATAAATTTTCCACCACAG +
Preference number: 4 (lower is better)
Translates to: THEAKMLHTTENNNVIDVGFVKT*INFPPQ
Trigger: CTGTGGTGGAAAATTTATGCAGGTTTTCACGAATCC...GACATCTATAACGTTATTATTTTCAGTGGTGTGCAGCATTTTTGCTTCATGAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262461.7
CDS-3UTR CCA 90 bp ACTCATGAAGCAAAAATGCTGCACACCACTGAAAATAATAACGTTATAGATGTCCATAACAAGACACTGTaGCCTAAAGTTTTTCACGTG +
Preference number: 4 (lower is better)
Translates to: THEAKMLHTTENNNVIDVHNKTL*PKVFHV
Trigger: CACGTGAAAAACTTTAGGCCACAGTGTCTTGTTATG...GACATCTATAACGTTATTATTTTCAGTGGTGTGCAGCATTTTTGCTTCATGAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262461.7
CDS-3UTR TCA 90 bp CATTGTGATGTTAATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAATTGACCCACAATCCATaGCAATCTAATGAAAAGCAT +
Preference number: 4 (lower is better)
Translates to: HCDVNVSLKISVTTLGTELTHNP*QSNEKH
Trigger: ATGCTTTTCATTAGATTGTCATGGATTGTGGGTCAA...TTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATTAACATCACAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp CATTGTGATGTTAATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAAATTGCTCCAAGAAGTaGTATCCACATGTTGTAGTA +
Preference number: 4 (lower is better)
Translates to: HCDVNVSLKISVTTLGTENCSKK*YPHVVV
Trigger: TACTACAACATGTGGATATCACTTCTTGGAGCAATT...TTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATTAACATCACAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp CATTGTGATGTTAATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAATCTTTATCATCTTCATaGAGTCTGTATGGCTCAATG +
Preference number: 4 (lower is better)
Translates to: HCDVNVSLKISVTTLGTESLSSS*SLYGSM
Trigger: CATTGAGCCATACAGACTTCATGAAGATGATAAAGA...TTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATTAACATCACAATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR TCA 90 bp ACTCATGAAGCAAAAATGCTGCACACCACTGAAAATAATAACGTTATAGATGTCATTGAGATATGGAATTaGCTAAAACCGAAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: THEAKMLHTTENNNVIDVIEIWN*LKPKSP
Trigger: TGGAGACTTCGGTTTTAGTCAATTCCATATCTCAAT...GACATCTATAACGTTATTATTTTCAGTGGTGTGCAGCATTTTTGCTTCATGAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262461.7
CDS-3UTR GCA 90 bp ACTCATGAAGCAAAAATGCTGCACACCACTGAAAATAATAACGTTATAGATGTCTTCTCTCAAGTCATCTaGATGTACTGGAGCATAAAA +
Preference number: 4 (lower is better)
Translates to: THEAKMLHTTENNNVIDVFSQVI*MYWSIK
Trigger: TTTTATGCTCCAGTACATGCAGATGACTTGAGAGAA...GACATCTATAACGTTATTATTTTCAGTGGTGTGCAGCATTTTTGCTTCATGAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262461.7
CDS-3UTR GCA 90 bp CATTGTGATGTTAATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAACATAGGAACAAGGACTaGTTTCACAAGATGAAAAAT +
Preference number: 4 (lower is better)
Translates to: HCDVNVSLKISVTTLGTEHRNKD*FHKMKN
Trigger: ATTTTTCATCTTGTGAAAGCAGTCCTTGTTCCTATG...TTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATTAACATCACAATG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR GCA 90 bp GGGAGACTCATGACAATAATATTAGCTGTGCTTGAATGTTCCTTTAATAACTCACATAGGAACAAGGACTaGTTTCACAAGATGAAAAAT +
Preference number: 4 (lower is better)
Translates to: GRLMTIILAVLECSFNNSHRNKD*FHKMKN
Trigger: ATTTTTCATCTTGTGAAAGCAGTCCTTGTTCCTATG...TGAGTTATTAAAGGAACATTCAAGCACAGCTAATATTATTGTCATGAGTCTCCC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509205.5
CDS-3UTR CCA 90 bp ACTCATGAAGCAAAAATGCTGCACACCACTGAAAATAATAACGTTATAGATGTCTTCATGAAGTCTGTATaGCTCAATGATTTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: THEAKMLHTTENNNVIDVFMKSV*LNDFLK
Trigger: TTTGAGGAAATCATTGAGCCATACAGACTTCATGAA...GACATCTATAACGTTATTATTTTCAGTGGTGTGCAGCATTTTTGCTTCATGAGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262461.7
CDS GCA 90 bp TCCCGGGGCGCCGGAGGAGGGCGCCGTGGGCCGCGGCTCCATAGCTaGCCGACCCCCGGCGGAACTGCAGAGCCCGGCGGACGTCTCCGG +
Preference number: 5 (lower is better)
Translates to: SRGAGGGRRGPRLHS*PTPGGTAEPGGRLR
Trigger: CCGGAGACGTCCGCCGGGCTCTGCAGTTCCGCCGGGGGTCGGGCAGCTATGGAGCCGCGGCCCACGGCGCCCTCCTCCGGCGCCCCGGGA
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
ENST00000628403.2
CDS GCA 90 bp CCCGGCTCGCGGGCGCAGCATCCTCCGGCACCGAGGGCACAGCCGTaGCGGGCAGTTCCACCCTGGCTGCGGCCAGCGCAGCGGCTGACG +
Preference number: 5 (lower is better)
Translates to: PGSRAQHPPAPRAQP*RAVPPWLRPAQRLT
Trigger: CGTCAGCCGCTGCGCTGGCCGCAGCCAGGGTGGAACTGCCCGGCACGGCTGTGCCCTCGGTGCCGGAGGATGCTGCGCCCGCGAGCCGGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
ENST00000628403.2
CDS CCA 90 bp CATCCTCCGGCACCGAGGGCACAGCCGTGCCGGGCAGTTCCACCCTaGCTGCGGCCAGCGCAGCGGCTGACGGCGTCTCCCCGACCCCGG +
Preference number: 5 (lower is better)
Translates to: HPPAPRAQPCRAVPP*LRPAQRLTASPRPR
Trigger: CCGGGGTCGGGGAGACGCCGTCAGCCGCTGCGCTGGCCGCAGCCAGGGTGGAACTGCCCGGCACGGCTGTGCCCTCGGTGCCGGAGGATG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
ENST00000628403.2
CDS GCA 90 bp GCTGGTGGTGCCCACTGCCGCCGCCGCCGCCGGAGTGCAGGCTGCTaGCCTCGCTCAGCACCGTGTCCCCGCCGTTCTGGAAGCTCACGT +
Preference number: 5 (lower is better)
Translates to: AGGAHCRRRRRSAGC*PRSAPCPRRSGSSR
Trigger: ACGTGAGCTTCCAGAACGGCGGGGACACGGTGCTGAGCGAGGGCAGCAGCCTGCACTCCGGCGGCGGCGGCGGCAGTGGGCACCACCAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
ENST00000628403.2
CDS CCA 90 bp GCCGCAGCAGCGGCCCGCCCGGCGTTCTCGGAAACCAGGTCCACCTaGAAACGGCTCTGGCTCGGGGTGGGCCCCAAGGGTCTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: AAAAARPAFSETRST*KRLWLGVGPKGLPS
Trigger: GCTGGGCAGACCCTTGGGGCCCACCCCGAGCCAGAGCCGTTTCCAGGTGGACCTGGTTTCCGAGAACGCCGGGCGGGCCGCTGCTGCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
ENST00000628403.2
CDS CCA 90 bp GGCGGACGTCTCCGGCAGCACGCCCTCCACACCCCTGGCCGGCGGTaGCCACAGCCGCAAGACCAGGTGAGAGAGTCTTTCTCCCCGCCG +
Preference number: 5 (lower is better)
Translates to: GGRLRQHALHTPGRR*PQPQDQVRESFSPP
Trigger: CGGCGGGGAGAAAGACTCTCTCACCTGGTCTTGCGGCTGTGGCCACCGCCGGCCAGGGGTGTGGAGGGCGTGCTGCCGGAGACGTCCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000509205.5
ENST00000628403.2
CDS CCA 90 bp TGCAGAGCCCGGCGGACGTCTCCGGCAGCACGCCCTCCACACCCCTaGCCGGCGGTGGCCACAGCCGCAAGACCAGGTGAGAGAGTCTTT +
Preference number: 5 (lower is better)
Translates to: CRARRTSPAARPPHP*PAVATAARPGERVF
Trigger: AAAGACTCTCTCACCTGGTCTTGCGGCTGTGGCCACCGCCGGCCAGGGGTGTGGAGGGCGTGCTGCCGGAGACGTCCGCCGGGCTCTGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000509205.5
ENST00000628403.2
CDS CCA 90 bp TGCCCTCGCTCAGCACCGTGTCCCCGCCGTTCTGGAAGCTCACGTTaGGCCCGTCGACTCCGACCCCGGCAGCATCTGACAGGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: CPRSAPCPRRSGSSR*ARRLRPRQHLTGCL
Trigger: AAGACAGCCTGTCAGATGCTGCCGGGGTCGGAGTCGACGGGCCCAACGTGAGCTTCCAGAACGGCGGGGACACGGTGCTGAGCGAGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
ENST00000628403.2
CDS TCA 90 bp CTGGAAGCTCACGTTGGGCCCGTCGACTCCGACCCCGGCAGCATCTaGCAGGCTGTCTTCAGCCGACGAGGAGGCAGCTGGGTCCACGAA +
Preference number: 5 (lower is better)
Translates to: LEAHVGPVDSDPGSI*QAVFSRRGGSWVHE
Trigger: TTCGTGGACCCAGCTGCCTCCTCGTCGGCTGAAGACAGCCTGTCAGATGCTGCCGGGGTCGGAGTCGACGGGCCCAACGTGAGCTTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
ENST00000628403.2
CDS GCA 90 bp AGGTGTTGGTGTGGGTATCATAATAGTAGTGCTGGTGGTGCCCACTaGCGCCGCCGCCGCCGGAGTGCAGGCTGCTGCCCTCGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: RCWCGYHNSSAGGAH*RRRRRSAGCCPRSA
Trigger: TGCTGAGCGAGGGCAGCAGCCTGCACTCCGGCGGCGGCGGCGGCAGTGGGCACCACCAGCACTACTATTATGATACCCACACCAACACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
ENST00000628403.2
CDS-3UTR CAA 90 bp ACTACACTAGGCACTGAAGTACCATTCTGGAGGGCTGTCCACTGTATAGAACATACAGCGTCCATGGTGTaGTGGCCGAAGGTGCGCAGG +
Preference number: 5 (lower is better)
Translates to: TTLGTEVPFWRAVHCIEHTASMV*WPKVRR
Trigger: CCTGCGCACCTTCGGCCACAACACCATGGACGCTGT...ATGTTCTATACAGTGGACAGCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp ACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTACGCGGAAGCGGCCCTaGGCTTCCTCGCTGCCTTTA +
Preference number: 5 (lower is better)
Translates to: TKTEVSIHVINGATFLCATRKRP*ASSLPL
Trigger: TAAAGGCAGCGAGGAAGCCAAGGGCCGCTTCCGCGT...AGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp TCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGGCTACGCGGAAGCGGCCCTaGGCTTCCTCGCTGCCTTTA +
Preference number: 5 (lower is better)
Translates to: SLKISVTTLGTEVPFWRATRKRP*ASSLPL
Trigger: TAAAGGCAGCGAGGAAGCCAAGGGCCGCTTCCGCGT...AGCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp TTCTACTGTCTTTACCCCCAAACATTGCAAAACCTGCAATGGAACAATGCTGTGACAGCGTCCATGGTGTaGTGGCCGAAGGTGCGCAGG +
Preference number: 5 (lower is better)
Translates to: FYCLYPQTLQNLQWNNAVTASMV*WPKVRR
Trigger: CCTGCGCACCTTCGGCCACAACACCATGGACGCTGT...CACAGCATTGTTCCATTGCAGGTTTTGCAATGTTTGGGGGTAAAGACAGTAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262461.7
CDS-3UTR CAA 90 bp TTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTACAGCGTCCATGGTGTaGTGGCCGAAGGTGCGCAGG +
Preference number: 5 (lower is better)
Translates to: LTKTEVSIHVINGATFLCTASMV*WPKVRR
Trigger: CCTGCGCACCTTCGGCCACAACACCATGGACGCTGT...ACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp ATGGAATTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCTTCTGGAAGCTCACGTaGGGCCCGTCGACTCCGACC +
Preference number: 5 (lower is better)
Translates to: MELTKTEVSIHVINGATFFWKLT*GPSTPT
Trigger: GGTCGGAGTCGACGGGCCCAACGTGAGCTTCCAGAA...GAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAATTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp AAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCAAGGCAGGAGAATCGCTaGAACTGGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: KPKSPYTLSMEQLSCVLSRQENR*NWGGGG
Trigger: ACCTCCACCTCCCCAGTTCAAGCGATTCTCCTGCCT...TGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262461.7
ENST00000343225.4
CDS-3UTR CAA 90 bp AATCGTGAAAGAAAAGTCACCATTCGCCATTGTGATGTTAATGTGTCATTGAAGTTCTGGAAGCTCACGTaGGGCCCGTCGACTCCGACC +
Preference number: 5 (lower is better)
Translates to: NRERKVTIRHCDVNVSLKFWKLT*GPSTPT
Trigger: GGTCGGAGTCGACGGGCCCAACGTGAGCTTCCAGAA...CTTCAATGACACATTAACATCACAATGGCGAATGGTGACTTTTCTTTCACGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp CATTGTGATGTTAATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAACGCGGAAGCGGCCCTaGGCTTCCTCGCTGCCTTTA +
Preference number: 5 (lower is better)
Translates to: HCDVNVSLKISVTTLGTETRKRP*ASSLPL
Trigger: TAAAGGCAGCGAGGAAGCCAAGGGCCGCTTCCGCGT...TTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATTAACATCACAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp ACTACACTAGGCACTGAAGTACCATTCTGGAGGGCTGTCCACTGTATAGAACATCGAAGATTAGACCAATaGCACCACCAAATTCTGGCC +
Preference number: 5 (lower is better)
Translates to: TTLGTEVPFWRAVHCIEHRRLDQ*HHQILA
Trigger: GGCCAGAATTTGGTGGTGCAATTGGTCTAATCTTCG...ATGTTCTATACAGTGGACAGCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS CCA 90 bp GACTCCTTTACTTTCTGCAGTATACGTGACCACAGCATCTCTGGTTaGAGTACTTTCTTCCCCATTTGCAAAGCCATCCTCAAAAGGTTC +
Preference number: 5 (lower is better)
Translates to: DSFTFCSIRDHSISG*STFFPICKAILKRF
Trigger: GAACCTTTTGAGGATGGCTTTGCAAATGGGGAAGAAAGTACTCCAACCAGAGATGCTGTGGTCACGTATACTGCAGAAAGTAAAGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
ENST00000628403.2
CDS-3UTR CAA 90 bp GTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGCCACAGCATCTCTGGTaGGAGTACTTTCTTCCCCAT +
Preference number: 5 (lower is better)
Translates to: VSLKISVTTLGTEVPFWRPQHLW*EYFLPH
Trigger: ATGGGGAAGAAAGTACTCCAACCAGAGATGCTGTGG...CCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp AAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCAGCAACTGCAACAGCGTaGGCAAAGGCGAAGATTAGA +
Preference number: 5 (lower is better)
Translates to: KPKSPYTLSMEQLSCVLSATATA*AKAKIR
Trigger: TCTAATCTTCGCCTTTGCCAACGCTGTTGCAGTTGC...TGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp TCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGGCTGCAACTGCAACAGCGTaGGCAAAGGCGAAGATTAGA +
Preference number: 5 (lower is better)
Translates to: SLKISVTTLGTEVPFWRAATATA*AKAKIR
Trigger: TCTAATCTTCGCCTTTGCCAACGCTGTTGCAGTTGC...AGCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp GTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGCAGGTAAGTCAGGGCTaGTGTAGAGGATCCCCAATT +
Preference number: 5 (lower is better)
Translates to: VSLKISVTTLGTEVPFWRQVSQG*CRGSPI
Trigger: AATTGGGGATCCTCTACACAAGCCCTGACTTACCTG...CCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp GAGAGCACTAGACACAGCACCTTTTCGTGCAACTGGGAGACTCATGACAATAATCTCCAGAAAGACGAATaGAATGCTGCAGTGCATTCA +
Preference number: 5 (lower is better)
Translates to: ESTRHSTFSCNWETHDNNLQKDE*NAAVHS
Trigger: TGAATGCACTGCAGCATTCAATTCGTCTTTCTGGAG...ATTATTGTCATGAGTCTCCCAGTTGCACGAAAAGGTGCTGTGTCTAGTGCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509205.5
CDS GCA 90 bp GCAGCGGCACCAATTGCTCAAAGGAGTGCAAACTTTATTATGAACTaGGCATGTGAGGAATCTAGGTTGTGCGCTCCTTATGAGAATTTA +
Preference number: 5 (lower is better)
Translates to: AAAPIAQRSANFIMN*ACEESRLCAPYENL
Trigger: TAAATTCTCATAAGGAGCGCACAACCTAGATTCCTCACATGCGCAGTTCATAATAAAGTTTGCACTCCTTTGAGCAATTGGTGCCGCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504416.5
CDS-3UTR CAA 90 bp AAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCCGTACTAATACACCCTaGATCCAGCCAAACTTCACG +
Preference number: 5 (lower is better)
Translates to: KTEVSIHVINGATFLCAFRTNTP*IQPNFT
Trigger: CGTGAAGTTTGGCTGGATCAAGGGTGTATTAGTACG...GAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp TCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGGCTCGAAGATTAGACCAATaGCACCACCAAATTCTGGCC +
Preference number: 5 (lower is better)
Translates to: SLKISVTTLGTEVPFWRARRLDQ*HHQILA
Trigger: GGCCAGAATTTGGTGGTGCAATTGGTCTAATCTTCG...AGCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp AAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCCATCTCTTTCATGGCTaGTCTTCGAGGACCCATATG +
Preference number: 5 (lower is better)
Translates to: KTEVSIHVINGATFLCAFHLFHG*SSRTHM
Trigger: CATATGGGTCCTCGAAGACAAGCCATGAAAGAGATG...GAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp GTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGCATCTCTTTCATGGCTaGTCTTCGAGGACCCATATG +
Preference number: 5 (lower is better)
Translates to: VSLKISVTTLGTEVPFWRHLFHG*SSRTHM
Trigger: CATATGGGTCCTCGAAGACAAGCCATGAAAGAGATG...CCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp TTCTACTGTCTTTACCCCCAAACATTGCAAAACCTGCAATGGAACAATGCTGTGCAAGGACAAGTGTGTTaGGCTTCATACGACCAAGAC +
Preference number: 5 (lower is better)
Translates to: FYCLYPQTLQNLQWNNAVQGQVC*ASYDQD
Trigger: GTCTTGGTCGTATGAAGCCAAACACACTTGTCCTTG...CACAGCATTGTTCCATTGCAGGTTTTGCAATGTTTGGGGGTAAAGACAGTAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262461.7
CDS-3UTR CAA 90 bp AAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCCAAGGACAAGTGTGTTaGGCTTCATACGACCAAGAC +
Preference number: 5 (lower is better)
Translates to: KTEVSIHVINGATFLCAFQGQVC*ASYDQD
Trigger: GTCTTGGTCGTATGAAGCCAAACACACTTGTCCTTG...GAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp ACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTCTTACTACCACATCCTaGGTGCCAGGAGATTTCTCT +
Preference number: 5 (lower is better)
Translates to: TKTEVSIHVINGATFLCALTTTS*VPGDFS
Trigger: AGAGAAATCTCCTGGCACCAAGGATGTGGTAGTAAG...AGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp TCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGGCTCTTACTACCACATCCTaGGTGCCAGGAGATTTCTCT +
Preference number: 5 (lower is better)
Translates to: SLKISVTTLGTEVPFWRALTTTS*VPGDFS
Trigger: AGAGAAATCTCCTGGCACCAAGGATGTGGTAGTAAG...AGCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp AGCACTAGACACAGCACCTTTTCGTGCAACTGGGAGACTCATGACAATAATATTCTTACTACCACATCCTaGGTGCCAGGAGATTTCTCT +
Preference number: 5 (lower is better)
Translates to: STRHSTFSCNWETHDNNILTTTS*VPGDFS
Trigger: AGAGAAATCTCCTGGCACCAAGGATGTGGTAGTAAG...AATATTATTGTCATGAGTCTCCCAGTTGCACGAAAAGGTGCTGTGTCTAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509205.5
CDS-3UTR CAA 90 bp GAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCAAATTACCACAGCATCTCTGGTaGGAGTACTTTCTTCCCCAT +
Preference number: 5 (lower is better)
Translates to: EVSIHVINGATFLCAFKLPQHLW*EYFLPH
Trigger: ATGGGGAAGAAAGTACTCCAACCAGAGATGCTGTGG...TAATTTGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp GAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCAAATTAGCAACTGCAACAGCGTaGGCAAAGGCGAAGATTAGA +
Preference number: 5 (lower is better)
Translates to: EVSIHVINGATFLCAFKLATATA*AKAKIR
Trigger: TCTAATCTTCGCCTTTGCCAACGCTGTTGCAGTTGC...TAATTTGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp ATGGAATTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCAGGTAAGTCAGGGCTaGTGTAGAGGATCCCCAATT +
Preference number: 5 (lower is better)
Translates to: MELTKTEVSIHVINGATFQVSQG*CRGSPI
Trigger: AATTGGGGATCCTCTACACAAGCCCTGACTTACCTG...GAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAATTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp TCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGGCTCTCCAGAAAGACGAATaGAATGCTGCAGTGCATTCA +
Preference number: 5 (lower is better)
Translates to: SLKISVTTLGTEVPFWRALQKDE*NAAVHS
Trigger: TGAATGCACTGCAGCATTCAATTCGTCTTTCTGGAG...AGCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp GTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGCTCCAGAAAGACGAATaGAATGCTGCAGTGCATTCA +
Preference number: 5 (lower is better)
Translates to: VSLKISVTTLGTEVPFWRLQKDE*NAAVHS
Trigger: TGAATGCACTGCAGCATTCAATTCGTCTTTCTGGAG...CCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp TTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTTCAACAGTGGTTGAGTaGCAGTCTTGCCATCCTCTT +
Preference number: 5 (lower is better)
Translates to: LTKTEVSIHVINGATFLCSTVVE*QSCHPL
Trigger: AAGAGGATGGCAAGACTGCAACTCAACCACTGTTGA...ACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262461.7
ENST00000509205.5
CDS-3UTR CAA 90 bp AAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCCTTTACCCCCAAACATaGCAAAACCTGCAATGGAAC +
Preference number: 5 (lower is better)
Translates to: KTEVSIHVINGATFLCAFLYPQT*QNLQWN
Trigger: GTTCCATTGCAGGTTTTGCAATGTTTGGGGGTAAAG...GAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262461.7
CDS-3UTR CAA 90 bp AATCGTGAAAGAAAAGTCACCATTCGCCATTGTGATGTTAATGTGTCATTGAAGCCACAGCATCTCTGGTaGGAGTACTTTCTTCCCCAT +
Preference number: 5 (lower is better)
Translates to: NRERKVTIRHCDVNVSLKPQHLW*EYFLPH
Trigger: ATGGGGAAGAAAGTACTCCAACCAGAGATGCTGTGG...CTTCAATGACACATTAACATCACAATGGCGAATGGTGACTTTTCTTTCACGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp ATGGAATTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCGTACTAATACACCCTaGATCCAGCCAAACTTCACG +
Preference number: 5 (lower is better)
Translates to: MELTKTEVSIHVINGATFRTNTP*IQPNFT
Trigger: CGTGAAGTTTGGCTGGATCAAGGGTGTATTAGTACG...GAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAATTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp AATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGCGTACTAATACACCCTaGATCCAGCCAAACTTCACG +
Preference number: 5 (lower is better)
Translates to: NVSLKISVTTLGTEVPFWRTNTP*IQPNFT
Trigger: CGTGAAGTTTGGCTGGATCAAGGGTGTATTAGTACG...CCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp AATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGCGAAGATTAGACCAATaGCACCACCAAATTCTGGCC +
Preference number: 5 (lower is better)
Translates to: NVSLKISVTTLGTEVPFWRRLDQ*HHQILA
Trigger: GGCCAGAATTTGGTGGTGCAATTGGTCTAATCTTCG...CCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp TTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCCATCCTGGAGATTTaGCAAGTGATGCATGGAATA +
Preference number: 5 (lower is better)
Translates to: LTKTEVSIHVINGATFLCAILEI*QVMHGI
Trigger: TATTCCATGCATCACTTGCAAAATCTCCAGGATGGC...ACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp GAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCAAATTACATCTCTTTCATGGCTaGTCTTCGAGGACCCATATG +
Preference number: 5 (lower is better)
Translates to: EVSIHVINGATFLCAFKLHLFHG*SSRTHM
Trigger: CATATGGGTCCTCGAAGACAAGCCATGAAAGAGATG...TAATTTGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp AGCACTAGACACAGCACCTTTTCGTGCAACTGGGAGACTCATGACAATAATATTTCGCTGATATTTGGCTaGATCGATGGACATCTCTTT +
Preference number: 5 (lower is better)
Translates to: STRHSTFSCNWETHDNNISLIFG*IDGHLF
Trigger: AAAGAGATGTCCATCGATCAAGCCAAATATCAGCGA...AATATTATTGTCATGAGTCTCCCAGTTGCACGAAAAGGTGCTGTGTCTAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509205.5
CDS-3UTR CAA 90 bp GAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCAAATTACAAGGACAAGTGTGTTaGGCTTCATACGACCAAGAC +
Preference number: 5 (lower is better)
Translates to: EVSIHVINGATFLCAFKLQGQVC*ASYDQD
Trigger: GTCTTGGTCGTATGAAGCCAAACACACTTGTCCTTG...TAATTTGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp ACTACACTAGGCACTGAAGTACCATTCTGGAGGGCTGTCCACTGTATAGAACATATCCCTCATATCTGCTaGCAACCAATCTTTCTTAAA +
Preference number: 5 (lower is better)
Translates to: TTLGTEVPFWRAVHCIEHIPHIC*QPIFLK
Trigger: TTTAAGAAAGATTGGTTGCAAGCAGATATGAGGGAT...ATGTTCTATACAGTGGACAGCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp ATGGAATTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCAACCCTTTTGGCTTCTaGCTCTCCAGTGGGATAAAT +
Preference number: 5 (lower is better)
Translates to: MELTKTEVSIHVINGATFNPFGF*LSSGIN
Trigger: ATTTATCCCACTGGAGAGCAAGAAGCCAAAAGGGTT...GAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAATTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp AATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGGCCATCCTGGAGATTTaGCAAGTGATGCATGGAATA +
Preference number: 5 (lower is better)
Translates to: NVSLKISVTTLGTEVPFWAILEI*QVMHGI
Trigger: TATTCCATGCATCACTTGCAAAATCTCCAGGATGGC...CCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp AAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCTTTTCACTGAGTGGTTaGGAAGTATCTAAATCGGAC +
Preference number: 5 (lower is better)
Translates to: KTEVSIHVINGATFLCAFFSLSG*EVSKSD
Trigger: GTCCGATTTAGATACTTCCAAACCACTCAGTGAAAA...GAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp AATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAAGTCTATCCGGAACTaGCTAAGCAAAGTAGCCATC +
Preference number: 5 (lower is better)
Translates to: NVSLKISVTTLGTEVPFWKSIRN*LSKVAI
Trigger: GATGGCTACTTTGCTTAGCAAGTTCCGGATAGACTT...CCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp ATGGAATTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCAAGTCTATCCGGAACTaGCTAAGCAAAGTAGCCATC +
Preference number: 5 (lower is better)
Translates to: MELTKTEVSIHVINGATFKSIRN*LSKVAI
Trigger: GATGGCTACTTTGCTTAGCAAGTTCCGGATAGACTT...GAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAATTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS GCA 90 bp AGTGCAAACTTTATTATGAACTGCGCATGTGAGGAATCTAGGTTGTaGGCTCCTTATGAGAATTTAATGCCTGATGATCGTCAATTGTCT +
Preference number: 5 (lower is better)
Translates to: SANFIMNCACEESRL*APYENLMPDDRQLS
Trigger: AGACAATTGACGATCATCAGGCATTAAATTCTCATAAGGAGCGCACAACCTAGATTCCTCACATGCGCAGTTCATAATAAAGTTTGCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504416.5
CDS-3UTR CAA 90 bp ACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTAAATCAAAGTTTAATTaGCAGGCTGCAGAAGTACAG +
Preference number: 5 (lower is better)
Translates to: TKTEVSIHVINGATFLCAKSKFN*QAAEVQ
Trigger: CTGTACTTCTGCAGCCTGCAAATTAAACTTTGATTT...AGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp AATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGTCGCTGATATTTGGCTaGATCGATGGACATCTCTTT +
Preference number: 5 (lower is better)
Translates to: NVSLKISVTTLGTEVPFWSLIFG*IDGHLF
Trigger: AAAGAGATGTCCATCGATCAAGCCAAATATCAGCGA...CCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp AAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCAATCCCTCATATCTGCTaGCAACCAATCTTTCTTAAA +
Preference number: 5 (lower is better)
Translates to: KPKSPYTLSMEQLSCVLSIPHIC*QPIFLK
Trigger: TTTAAGAAAGATTGGTTGCAAGCAGATATGAGGGAT...TGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp AAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCATCCTCTTCCTCAACTTaGTGTGTAATTGGTTTTTCA +
Preference number: 5 (lower is better)
Translates to: KPKSPYTLSMEQLSCVLSSSSST*CVIGFS
Trigger: TGAAAAACCAATTACACACAAAGTTGAGGAAGAGGA...TGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262461.7
ENST00000509205.5
CDS-3UTR CAA 90 bp CATTGTGATGTTAATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAATCAACAGTGGTTGAGTaGCAGTCTTGCCATCCTCTT +
Preference number: 5 (lower is better)
Translates to: HCDVNVSLKISVTTLGTESTVVE*QSCHPL
Trigger: AAGAGGATGGCAAGACTGCAACTCAACCACTGTTGA...TTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATTAACATCACAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262461.7
ENST00000509205.5
CDS-3UTR CAA 90 bp TCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGGCTTTCTTTGGTTTGGTATaGATATCTCCTAGAACCATG +
Preference number: 5 (lower is better)
Translates to: SLKISVTTLGTEVPFWRAFFGLV*ISPRTM
Trigger: CATGGTTCTAGGAGATATCAATACCAAACCAAAGAA...AGCCCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp GTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAGGTTCCACCACAGAAACTaGTATCAATTAACCCACTTA +
Preference number: 5 (lower is better)
Translates to: VSLKISVTTLGTEVPFWRFHHRN*YQLTHL
Trigger: TAAGTGGGTTAATTGATACAAGTTTCTGTGGTGGAA...CCTCCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262461.7
ENST00000343225.4
CDS-3UTR CAA 90 bp GAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCAAATTAGGCACAATAGGGCCTTaGGATTCTTTGTGTGTAATT +
Preference number: 5 (lower is better)
Translates to: EVSIHVINGATFLCAFKLGTIGP*DSLCVI
Trigger: AATTACACACAAAGAATCCAAAGGCCCTATTGTGCC...TAATTTGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343225.4
CDS-3UTR CAA 90 bp ACTCATGAAGCAAAAATGCTGCACACCACTGAAAATAATAACGTTATAGATGTCAACCCTTTTGGCTTCTaGCTCTCCAGTGGGATAAAT +
Preference number: 5 (lower is better)
Translates to: THEAKMLHTTENNNVIDVNPFGF*LSSGIN
Trigger: ATTTATCCCACTGGAGAGCAAGAAGCCAAAAGGGTT...GACATCTATAACGTTATTATTTTCAGTGGTGTGCAGCATTTTTGCTTCATGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262461.7
CDS-3UTR CAA 90 bp CATTGTGATGTTAATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAAACCCTTTTGGCTTCTaGCTCTCCAGTGGGATAAAT +
Preference number: 5 (lower is better)
Translates to: HCDVNVSLKISVTTLGTENPFGF*LSSGIN
Trigger: ATTTATCCCACTGGAGAGCAAGAAGCCAAAAGGGTT...TTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATTAACATCACAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp GGGAGACTCATGACAATAATATTAGCTGTGCTTGAATGTTCCTTTAATAACTCAGCCATCCTGGAGATTTaGCAAGTGATGCATGGAATA +
Preference number: 5 (lower is better)
Translates to: GRLMTIILAVLECSFNNSAILEI*QVMHGI
Trigger: TATTCCATGCATCACTTGCAAAATCTCCAGGATGGC...TGAGTTATTAAAGGAACATTCAAGCACAGCTAATATTATTGTCATGAGTCTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509205.5
CDS-3UTR CAA 90 bp TTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTATCCCTCATATCTGCTaGCAACCAATCTTTCTTAAA +
Preference number: 5 (lower is better)
Translates to: LTKTEVSIHVINGATFLCIPHIC*QPIFLK
Trigger: TTTAAGAAAGATTGGTTGCAAGCAGATATGAGGGAT...ACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp ATGGAATTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCTTTTCACTGAGTGGTTaGGAAGTATCTAAATCGGAC +
Preference number: 5 (lower is better)
Translates to: MELTKTEVSIHVINGATFFSLSG*EVSKSD
Trigger: GTCCGATTTAGATACTTCCAAACCACTCAGTGAAAA...GAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAATTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp CATTGTGATGTTAATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAAAGTCTATCCGGAACTaGCTAAGCAAAGTAGCCATC +
Preference number: 5 (lower is better)
Translates to: HCDVNVSLKISVTTLGTEKSIRN*LSKVAI
Trigger: GATGGCTACTTTGCTTAGCAAGTTCCGGATAGACTT...TTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATTAACATCACAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp TTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTTTCTTTGGTTTGGTATaGATATCTCCTAGAACCATG +
Preference number: 5 (lower is better)
Translates to: LTKTEVSIHVINGATFLCFFGLV*ISPRTM
Trigger: CATGGTTCTAGGAGATATCAATACCAAACCAAAGAA...ACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp TTGACTAAAACCGAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTTTCCACCACAGAAACTaGTATCAATTAACCCACTTA +
Preference number: 5 (lower is better)
Translates to: LTKTEVSIHVINGATFLCFHHRN*YQLTHL
Trigger: TAAGTGGGTTAATTGATACAAGTTTCTGTGGTGGAA...ACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTCGGTTTTAGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262461.7
ENST00000343225.4
CDS-3UTR CAA 90 bp GAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCAAATTAGGGCCTTTGGATTCTTaGTGTGTAATTGGTTTTTCA +
Preference number: 5 (lower is better)
Translates to: EVSIHVINGATFLCAFKLGPLDS*CVIGFS
Trigger: TGAAAAACCAATTACACACAAAGAATCCAAAGGCCC...TAATTTGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343225.4
CDS-3UTR CAA 90 bp GAAGTCTCCATACACGTTATCAATGGAGCAACTTTCCTGTGTGCTTTCAAATTAAAATCAAAGTTTAATTaGCAGGCTGCAGAAGTACAG +
Preference number: 5 (lower is better)
Translates to: EVSIHVINGATFLCAFKLKSKFN*QAAEVQ
Trigger: CTGTACTTCTGCAGCCTGCAAATTAAACTTTGATTT...TAATTTGAAAGCACACAGGAAAGTTGCTCCATTGATAACGTGTATGGAGACTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp CATTGTGATGTTAATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAATCGCTGATATTTGGCTaGATCGATGGACATCTCTTT +
Preference number: 5 (lower is better)
Translates to: HCDVNVSLKISVTTLGTESLIFG*IDGHLF
Trigger: AAAGAGATGTCCATCGATCAAGCCAAATATCAGCGA...TTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATTAACATCACAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp AATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAGTACCATTCTGGAACCACTACTCCATATaGTATGTCAAAAGCATCATG +
Preference number: 5 (lower is better)
Translates to: NVSLKISVTTLGTEVPFWNHYSI*YVKSIM
Trigger: CATGATGCTTTTGACATACAATATGGAGTAGTGGTT...CCAGAATGGTACTTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp AATCGTGAAAGAAAAGTCACCATTCGCCATTGTGATGTTAATGTGTCATTGAAGAAATCAAAGTTTAATTaGCAGGCTGCAGAAGTACAG +
Preference number: 5 (lower is better)
Translates to: NRERKVTIRHCDVNVSLKKSKFN*QAAEVQ
Trigger: CTGTACTTCTGCAGCCTGCAAATTAAACTTTGATTT...CTTCAATGACACATTAACATCACAATGGCGAATGGTGACTTTTCTTTCACGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp GGGAGACTCATGACAATAATATTAGCTGTGCTTGAATGTTCCTTTAATAACTCATTTTCACTGAGTGGTTaGGAAGTATCTAAATCGGAC +
Preference number: 5 (lower is better)
Translates to: GRLMTIILAVLECSFNNSFSLSG*EVSKSD
Trigger: GTCCGATTTAGATACTTCCAAACCACTCAGTGAAAA...TGAGTTATTAAAGGAACATTCAAGCACAGCTAATATTATTGTCATGAGTCTCCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509205.5
CDS-3UTR CAA 90 bp AATCGTGAAAGAAAAGTCACCATTCGCCATTGTGATGTTAATGTGTCATTGAAGTTCTTTGGTTTGGTATaGATATCTCCTAGAACCATG +
Preference number: 5 (lower is better)
Translates to: NRERKVTIRHCDVNVSLKFFGLV*ISPRTM
Trigger: CATGGTTCTAGGAGATATCAATACCAAACCAAAGAA...CTTCAATGACACATTAACATCACAATGGCGAATGGTGACTTTTCTTTCACGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS-3UTR CAA 90 bp CATTGTGATGTTAATGTGTCATTGAAGATTTCAGTTACTACACTAGGCACTGAAAACCACTACTCCATATaGTATGTCAAAAGCATCATG +
Preference number: 5 (lower is better)
Translates to: HCDVNVSLKISVTTLGTENHYSI*YVKSIM
Trigger: CATGATGCTTTTGACATACAATATGGAGTAGTGGTT...TTCAGTGCCTAGTGTAGTAACTGAAATCTTCAATGACACATTAACATCACAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
CDS GCA 72 bp GCCGGAGGAGGGCGCCGTGGGCCGCGGCTCCATAGCTaGCCGACCCCCGGCGGAACTGCAGAGCCCGGCGGA +
Preference number: 6 (lower is better)
Translates to: AGGGRRGPRLHS*PTPGGTAEPGG
Trigger: TCCGCCGGGCTCTGCAGTTCCGCCGGGGGTCGGGCAGCTATGGAGCCGCGGCCCACGGCGCCCTCCTCCGGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
ENST00000628403.2
CDS GCA 72 bp CGGGCGCAGCATCCTCCGGCACCGAGGGCACAGCCGTaGCGGGCAGTTCCACCCTGGCTGCGGCCAGCGCAG +
Preference number: 6 (lower is better)
Translates to: RAQHPPAPRAQP*RAVPPWLRPAQ
Trigger: CTGCGCTGGCCGCAGCCAGGGTGGAACTGCCCGGCACGGCTGTGCCCTCGGTGCCGGAGGATGCTGCGCCCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
ENST00000628403.2
CDS CCA 72 bp GCACCGAGGGCACAGCCGTGCCGGGCAGTTCCACCCTaGCTGCGGCCAGCGCAGCGGCTGACGGCGTCTCCC +
Preference number: 6 (lower is better)
Translates to: APRAQPCRAVPP*LRPAQRLTASP
Trigger: GGGAGACGCCGTCAGCCGCTGCGCTGGCCGCAGCCAGGGTGGAACTGCCCGGCACGGCTGTGCCCTCGGTGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
ENST00000628403.2
CDS CCA 72 bp CGGCGGACGTCTCCGGCAGCACGCCCTCCACACCCCTaGCCGGCGGTGGCCACAGCCGCAAGACCAGGTGAG +
Preference number: 6 (lower is better)
Translates to: RRTSPAARPPHP*PAVATAARPGE
Trigger: CTCACCTGGTCTTGCGGCTGTGGCCACCGCCGGCCAGGGGTGTGGAGGGCGTGCTGCCGGAGACGTCCGCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
ENST00000628403.2
CDS CCA 72 bp GCGGCCCGCCCGGCGTTCTCGGAAACCAGGTCCACCTaGAAACGGCTCTGGCTCGGGGTGGGCCCCAAGGGT +
Preference number: 6 (lower is better)
Translates to: AARPAFSETRST*KRLWLGVGPKG
Trigger: ACCCTTGGGGCCCACCCCGAGCCAGAGCCGTTTCCAGGTGGACCTGGTTTCCGAGAACGCCGGGCGGGCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
ENST00000628403.2
CDS GCA 72 bp GCAAGACCAGGTGAGAGAGTCTTTCTCCCCGCCGCCTaGGGGCCGCCGCTAGCCTGGACGGCCACAGAGGCC +
Preference number: 6 (lower is better)
Translates to: ARPGERVFLPAA*GPPLAWTATEA
Trigger: GGCCTCTGTGGCCGTCCAGGCTAGCGGCGGCCCGCAGGCGGCGGGGAGAAAGACTCTCTCACCTGGTCTTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000509205.5
ENST00000628403.2
CDS CCA 72 bp CTCCGGCAGCACGCCCTCCACACCCCTGGCCGGCGGTaGCCACAGCCGCAAGACCAGGTGAGAGAGTCTTTC +
Preference number: 6 (lower is better)
Translates to: LRQHALHTPGRR*PQPQDQVRESF
Trigger: GAAAGACTCTCTCACCTGGTCTTGCGGCTGTGGCCACCGCCGGCCAGGGGTGTGGAGGGCGTGCTGCCGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000509205.5
ENST00000628403.2
CDS CCA 72 bp GCGTTCTCGGAAACCAGGTCCACCTGGAAACGGCTCTaGCTCGGGGTGGGCCCCAAGGGTCTGCCCAGCCCG +
Preference number: 6 (lower is better)
Translates to: AFSETRSTWKRL*LGVGPKGLPSP
Trigger: CGGGCTGGGCAGACCCTTGGGGCCCACCCCGAGCCAGAGCCGTTTCCAGGTGGACCTGGTTTCCGAGAACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
ENST00000628403.2
CDS CAA 90 bp GACGAGGAGGCAGCTGGGTCCACGAAGTTCACGCGGAAGCGGCCCTaGGCTTCCTCGCTGCCTTTAGCCGGCTCGCTCTCGCCGCTGGCT +
Preference number: 6 (lower is better)
Translates to: DEEAAGSTKFTRKRP*ASSLPLAGSLSPLA
Trigger: AGCCAGCGGCGAGAGCGAGCCGGCTAAAGGCAGCGAGGAAGCCAAGGGCCGCTTCCGCGTGAACTTCGTGGACCCAGCTGCCTCCTCGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
ENST00000628403.2
CDS CAA 90 bp CTGCCCTCGCTCAGCACCGTGTCCCCGCCGTTCTGGAAGCTCACGTaGGGCCCGTCGACTCCGACCCCGGCAGCATCTGACAGGCTGTCT +
Preference number: 6 (lower is better)
Translates to: LPSLSTVSPPFWKLT*GPSTPTPAASDRLS
Trigger: AGACAGCCTGTCAGATGCTGCCGGGGTCGGAGTCGACGGGCCCAACGTGAGCTTCCAGAACGGCGGGGACACGGTGCTGAGCGAGGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
ENST00000628403.2
CDS CAA 72 bp CTCAGCACCGTGTCCCCGCCGTTCTGGAAGCTCACGTaGGGCCCGTCGACTCCGACCCCGGCAGCATCTGAC +
Preference number: 6 (lower is better)
Translates to: LSTVSPPFWKLT*GPSTPTPAASD
Trigger: GTCAGATGCTGCCGGGGTCGGAGTCGACGGGCCCAACGTGAGCTTCCAGAACGGCGGGGACACGGTGCTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
ENST00000628403.2
CDS CCA 72 bp TCAGCACCGTGTCCCCGCCGTTCTGGAAGCTCACGTTaGGCCCGTCGACTCCGACCCCGGCAGCATCTGACA +
Preference number: 6 (lower is better)
Translates to: SAPCPRRSGSSR*ARRLRPRQHLT
Trigger: TGTCAGATGCTGCCGGGGTCGGAGTCGACGGGCCCAACGTGAGCTTCCAGAACGGCGGGGACACGGTGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
ENST00000628403.2
CDS CAA 72 bp GCAGCTGGGTCCACGAAGTTCACGCGGAAGCGGCCCTaGGCTTCCTCGCTGCCTTTAGCCGGCTCGCTCTCG +
Preference number: 6 (lower is better)
Translates to: AAGSTKFTRKRP*ASSLPLAGSLS
Trigger: CGAGAGCGAGCCGGCTAAAGGCAGCGAGGAAGCCAAGGGCCGCTTCCGCGTGAACTTCGTGGACCCAGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
ENST00000628403.2
CDS CCA 72 bp AAGCCATCCTCAAAAGGTTCCTTTTCCAGCTCGTCGTaGAGCTCCGCCAGGCTAGGCCGGAGCAGCTTCTCG +
Preference number: 6 (lower is better)
Translates to: KPSSKGSFSSSS*SSARLGRSSFS
Trigger: CGAGAAGCTGCTCCGGCCTAGCCTGGCGGAGCTCCACGACGAGCTGGAAAAGGAACCTTTTGAGGATGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
ENST00000628403.2
CDS CAA 90 bp CAAGGGTCCCCAATACCTGGGTCATGGACCAGTAATGAGCCAGGCTaGTTAGGAACTGGGTGGGCTGCACAGCAGAAGGTGAGCCATGGG +
Preference number: 6 (lower is better)
Translates to: QGSPIPGSWTSNEPG*LGTGWAAQQKVSHG
Trigger: CCCATGGCTCACCTTCTGCTGTGCAGCCCACCCAGTTCCTAACAAGCCTGGCTCATTACTGGTCCATGACCCAGGTATTGGGGACCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504416.5
CDS CCA 72 bp AGGAACTGGGTGGGCTGCACAGCAGAAGGTGAGCCATaGGCAGGTGAGCATTACCACCTGAAGTACACCTCA +
Preference number: 6 (lower is better)
Translates to: RNWVGCTAEGEP*AGEHYHLKYTS
Trigger: TGAGGTGTACTTCAGGTGGTAATGCTCACCTGCCCATGGCTCACCTTCTGCTGTGCAGCCCACCCAGTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504416.5
CDS CAA 72 bp CCAATACCTGGGTCATGGACCAGTAATGAGCCAGGCTaGTTAGGAACTGGGTGGGCTGCACAGCAGAAGGTG +
Preference number: 6 (lower is better)
Translates to: PIPGSWTSNEPG*LGTGWAAQQKV
Trigger: CACCTTCTGCTGTGCAGCCCACCCAGTTCCTAACAAGCCTGGCTCATTACTGGTCCATGACCCAGGTATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504416.5
CDS CCA 72 bp ATTGTCTCCCATCACCCCCAGACGGGACTGCCTAGTTaGAGAAAAACAAGCTCAGGACTCCCACTGAGTCTA +
Preference number: 6 (lower is better)
Translates to: IVSHHPQTGLPS*RKTSSGLPLSL
Trigger: TAGACTCAGTGGGAGTCCTGAGCTTGTTTTTCTCCAACTAGGCAGTCCCGTCTGGGGGTGATGGGAGACAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000504416.5
CDS CAA 72 bp GCTCCTTATGAGAATTTAATGCCTGATGATCGTCAATaGTCTCCCATCACCCCCAGACGGGACTGCCTAGTT +
Preference number: 6 (lower is better)
Translates to: APYENLMPDDRQ*SPITPRRDCLV
Trigger: AACTAGGCAGTCCCGTCTGGGGGTGATGGGAGACAATTGACGATCATCAGGCATTAAATTCTCATAAGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504416.5
CDS CAA 90 bp AGGTTGTGCGCTCCTTATGAGAATTTAATGCCTGATGATCGTCAATaGTCTCCCATCACCCCCAGACGGGACTGCCTAGTTGGAGAAAAA +
Preference number: 6 (lower is better)
Translates to: RLCAPYENLMPDDRQ*SPITPRRDCLVGEK
Trigger: TTTTTCTCCAACTAGGCAGTCCCGTCTGGGGGTGATGGGAGACAATTGACGATCATCAGGCATTAAATTCTCATAAGGAGCGCACAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504416.5
CDS TCA 72 bp GTTTTTCACGTGGTCTTCCACTCCAGAAAGACGAATTaGATGCTGCAGTGCATTCAGGTAAGTCAGGGCTTG +
Preference number: 6 (lower is better)
Translates to: VFHVVFHSRKTN*MLQCIQVSQGL
Trigger: CAAGCCCTGACTTACCTGAATGCACTGCAGCATTCAATTCGTCTTTCTGGAGTGGAAGACCACGTGAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
ENST00000628403.2
CDS TCA 72 bp CGGCACCAATTGCTCAAAGGAGTGCAAACTTTATTATaGACTGCGCATGTGAGGAATCTAGGTTGTGCGCTC +
Preference number: 6 (lower is better)
Translates to: RHQLLKGVQTLL*TAHVRNLGCAL
Trigger: GAGCGCACAACCTAGATTCCTCACATGCGCAGTTCATAATAAAGTTTGCACTCCTTTGAGCAATTGGTGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504416.5
CDS GCA 72 bp CTTGATCCAGCCAAACTTCACGACTCCTTTACTTTCTaGAGTATACGTGACCACAGCATCTCTGGTTGGAGT +
Preference number: 6 (lower is better)
Translates to: LDPAKLHDSFTF*SIRDHSISGWS
Trigger: ACTCCAACCAGAGATGCTGTGGTCACGTATACTGCAGAAAGTAAAGGAGTCGTGAAGTTTGGCTGGATCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
ENST00000628403.2
CDS CCA 72 bp GCTGATATTTGGCTTGATCGATGGACATCTCTTTCATaGCTTGTCTTCGAGGACCCATATGTACATGGCCAC +
Preference number: 6 (lower is better)
Translates to: ADIWLDRWTSLS*LVFEDPYVHGH
Trigger: GTGGCCATGTACATATGGGTCCTCGAAGACAAGCCATGAAAGAGATGTCCATCGATCAAGCCAAATATCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000504416.5
ENST00000509205.5
ENST00000509616.1
ENST00000628403.2
CDS CAA 72 bp CCTAGAACCATGATATCAGAAAAGTCTATCCGGAACTaGCTAAGCAAAGTAGCCATCGCTCTCCGGTCATGG +
Preference number: 6 (lower is better)
Translates to: PRTMISEKSIRN*LSKVAIALRSW
Trigger: CCATGACCGGAGAGCGATGGCTACTTTGCTTAGCAAGTTCCGGATAGACTTTTCTGATATCATGGTTCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000502849.1
ENST00000507791.5
ENST00000509205.5
ENST00000628403.2
CDS TCA 72 bp CAAACTTCACGACTCCTTTACTTTCTGCAGTATACGTaGCCACAGCATCTCTGGTTGGAGTACTTTCTTCCC +
Preference number: 6 (lower is better)
Translates to: QTSRLLYFLQYT*PQHLWLEYFLP
Trigger: GGGAAGAAAGTACTCCAACCAGAGATGCTGTGGTCACGTATACTGCAGAAAGTAAAGGAGTCGTGAAGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
ENST00000628403.2
CDS TCA 72 bp AAAGTCCACAATAAATGTAATGCGCTTGAATCATCCTaGAACCACAGACCCCACCACTACCCATGTCTGTGG +
Preference number: 6 (lower is better)
Translates to: KVHNKCNALESS*NHRPHHYPCLW
Trigger: CCACAGACATGGGTAGTGGTGGGGTCTGTGGTTTCAGGATGATTCAAGCGCATTACATTTATTGTGGACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504416.5
CDS CAA 72 bp ATATTTGGCTTGATCGATGGACATCTCTTTCATGGCTaGTCTTCGAGGACCCATATGTACATGGCCACAGAT +
Preference number: 6 (lower is better)
Translates to: IFGLIDGHLFHG*SSRTHMYMATD
Trigger: ATCTGTGGCCATGTACATATGGGTCCTCGAAGACAAGCCATGAAAGAGATGTCCATCGATCAAGCCAAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000504416.5
ENST00000509205.5
ENST00000509616.1
ENST00000628403.2
CDS GCA 72 bp CCAATTGCTCAAAGGAGTGCAAACTTTATTATGAACTaGGCATGTGAGGAATCTAGGTTGTGCGCTCCTTAT +
Preference number: 6 (lower is better)
Translates to: PIAQRSANFIMN*ACEESRLCAPY
Trigger: ATAAGGAGCGCACAACCTAGATTCCTCACATGCGCAGTTCATAATAAAGTTTGCACTCCTTTGAGCAATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504416.5
CDS CCA 72 bp AACTTGCTAAGCAAAGTAGCCATCGCTCTCCGGTCATaGTCTATTCTGTTTATCTTTCCACCAATGAATACT +
Preference number: 6 (lower is better)
Translates to: NLLSKVAIALRS*SILFIFPPMNT
Trigger: AGTATTCATTGGTGGAAAGATAAACAGAATAGACCATGACCGGAGAGCGATGGCTACTTTGCTTAGCAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000502849.1
ENST00000507791.5
ENST00000509205.5
ENST00000628403.2
CDS CAA 90 bp AGGAGTGCAAACTTTATTATGAACTGCGCATGTGAGGAATCTAGGTaGTGCGCTCCTTATGAGAATTTAATGCCTGATGATCGTCAATTG +
Preference number: 6 (lower is better)
Translates to: RSANFIMNCACEESR*CAPYENLMPDDRQL
Trigger: CAATTGACGATCATCAGGCATTAAATTCTCATAAGGAGCGCACAACCTAGATTCCTCACATGCGCAGTTCATAATAAAGTTTGCACTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504416.5
CDS GCA 72 bp TTTATTATGAACTGCGCATGTGAGGAATCTAGGTTGTaGGCTCCTTATGAGAATTTAATGCCTGATGATCGT +
Preference number: 6 (lower is better)
Translates to: FIMNCACEESRL*APYENLMPDDR
Trigger: ACGATCATCAGGCATTAAATTCTCATAAGGAGCGCACAACCTAGATTCCTCACATGCGCAGTTCATAATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504416.5
CDS CAA 72 bp CATTTTGTTCTTAATAAGCCATCGCTGATATTTGGCTaGATCGATGGACATCTCTTTCATGGCTTGTCTTCG +
Preference number: 6 (lower is better)
Translates to: HFVLNKPSLIFG*IDGHLFHGLSS
Trigger: CGAAGACAAGCCATGAAAGAGATGTCCATCGATCAAGCCAAATATCAGCGATGGCTTATTAAGAACAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000504416.5
ENST00000509205.5
ENST00000509616.1
ENST00000628403.2
CDS CAA 72 bp AACTTTATTATGAACTGCGCATGTGAGGAATCTAGGTaGTGCGCTCCTTATGAGAATTTAATGCCTGATGAT +
Preference number: 6 (lower is better)
Translates to: NFIMNCACEESR*CAPYENLMPDD
Trigger: ATCATCAGGCATTAAATTCTCATAAGGAGCGCACAACCTAGATTCCTCACATGCGCAGTTCATAATAAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504416.5
CDS TCA 72 bp GAACATTACTATGCAACAAAGAATTGCTCCAAGAAGTaGTATCCACATGTTGTAGTATTTGAATGCAGGACG +
Preference number: 6 (lower is better)
Translates to: EHYYATKNCSKK*YPHVVVFECRT
Trigger: CGTCCTGCATTCAAATACTACAACATGTGGATATCACTTCTTGGAGCAATTCTTTGTTGCATAGTAATGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
ENST00000628403.2
CDS CAA 90 bp CCTAAAAGAATCACGACTGTAATGGCTCCAATAATTCGGATATCATaGATTTCATCTATCATAAGTATGGAATGTTCCTTAAGCAACTCC +
Preference number: 6 (lower is better)
Translates to: PKRITTVMAPIIRIS*ISSIISMECSLSNS
Trigger: GGAGTTGCTTAAGGAACATTCCATACTTATGATAGATGAAATCAATGATATCCGAATTATTGGAGCCATTACAGTCGTGATTCTTTTAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
ENST00000628403.2
CDS CAA 90 bp TCCTCTTCCTCAACTTTGTGTGTAATTGGTTTTTCACTGAGTGGTTaGGAAGTATCTAAATCGGACTTTTTACTATATTCCACACTTACT +
Preference number: 6 (lower is better)
Translates to: SSSSTLCVIGFSLSG*EVSKSDFLLYSTLT
Trigger: AGTAAGTGTGGAATATAGTAAAAAGTCCGATTTAGATACTTCCAAACCACTCAGTGAAAAACCAATTACACACAAAGTTGAGGAAGAGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262461.7
ENST00000509205.5
ENST00000628403.2
CDS TCA 72 bp GAGATTTTGCAAGTGATGCATGGAATACTGAAAAATTaGTCAATGCATATGATGCAAGGAAGAAGTTTGAGA +
Preference number: 6 (lower is better)
Translates to: EILQVMHGILKN*SMHMMQGRSLR
Trigger: TCTCAAACTTCTTCCTTGCATCATATGCATTGATCAATTTTTCAGTATTCCATGCATCACTTGCAAAATCTC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262461.7
ENST00000343225.4
ENST00000509205.5
ENST00000628403.2