RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC12A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000074803

Ensembl transcript IDs: ENST00000330289.10, ENST00000380993.8, ENST00000396577.7, ENST00000558252.5, ENST00000558805.1, ENST00000559641.5, ENST00000559723.2, ENST00000560692.5, ENST00000561031.1, ENST00000561127.5, ENST00000646012.1, ENST00000647232.1, ENST00000647546.1

Found 544 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGTGGTTACTATGCCAGCCTGTCAATAAGCATTTATTGAGATCCTaGTGTGGGGCTGAGACCTATACCAGGGCTGAGAAGCAAACACTC +
Preference number: 1 (lower is better)
Translates to: LWLLCQPVNKHLLRS*CGAETYTRAEKQTL
Trigger: GAGTGTTTGCTTCTCAGCCCTGGTATAGGTCTCAGCCCCACAGCAGGATCTCAATAAATGCTTATTGACAGGCTGGCATAGTAACCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
3UTR CCA 90 bp ATTATGTTCCCCAGCCTATTGGTCTTTTCCTTTGATAACCACCTGTaGTTACTATGCCAGCCTGTCAATAAGCATTTATTGAGATCCTGC +
Preference number: 1 (lower is better)
Translates to: IMFPSLLVFSFDNHL*LLCQPVNKHLLRSC
Trigger: GCAGGATCTCAATAAATGCTTATTGACAGGCTGGCATAGTAACCACAGGTGGTTATCAAAGGAAAAGACCAATAGGCTGGGGAACATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
3UTR-3UTR TCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCGACCTATACCAGGGCTaGGAAGCAAACACTCAAAAC +
Preference number: 2 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVDLYQG*EANTQN
Trigger: GTTTTGAGTGTTTGCTTCTCAGCCCTGGTATAGGTC...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
3UTR-3UTR TCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCTCAATAAGCATTTATTaGGATCCTGCTGTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVSISIY*DPAVGL
Trigger: CAGCCCCACAGCAGGATCTCAATAAATGCTTATTGA...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
3UTR-3UTR GCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCCATTTATTGAGATCCTaGTGTGGGGCTGAGACCTAT +
Preference number: 2 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVHLLRS*CGAETY
Trigger: ATAGGTCTCAGCCCCACAGCAGGATCTCAATAAATG...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
3UTR-3UTR GCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCCACCTGTGGTTACTATaGCAGCCTGTCAATAAGCAT +
Preference number: 2 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVHLWLL*QPVNKH
Trigger: ATGCTTATTGACAGGCTGGCATAGTAACCACAGGTG...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
3UTR-3UTR CCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCTTTGATAACCACCTGTaGTTACTATGCCAGCCTGTC +
Preference number: 2 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVFDNHL*LLCQPV
Trigger: GACAGGCTGGCATAGTAACCACAGGTGGTTATCAAA...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
3UTR-3UTR TCA 90 bp ACATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGCAAACCTCAAAACCTGGATTaGGTGTCCCCTCTTCTGAAA +
Preference number: 2 (lower is better)
Translates to: TSHSFCFKCPSLLCPVGKPQNLD*VSPLLK
Trigger: TTTCAGAAGAGGGGACACTCAATCCAGGTTTTGAGG...TTTGCCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330289.10
3UTR-3UTR TCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCGAGCATAAGCCAACATaGGTTTCCTTGATTTTCTTG +
Preference number: 2 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVEHKPT*VSLIFL
Trigger: CAAGAAAATCAAGGAAACTCATGTTGGCTTATGCTC...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
3UTR-3UTR GCA 90 bp ATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGCAAACTGGGACAGGCAATTTCTaGTTCCTCTTTCCTTTGCAC +
Preference number: 2 (lower is better)
Translates to: IPFLLFQMSVSSLSCRQTGTGNF*FLFPLH
Trigger: GTGCAAAGGAAAGAGGAAGCAGAAATTGCCTGTCCC...AGTTTGCCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330289.10
3UTR-3UTR TCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCGACCTATACCAGGGCTaGGAAGCAAACACTCAAAAC +
Preference number: 2 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFDLYQG*EANTQN
Trigger: GTTTTGAGTGTTTGCTTCTCAGCCCTGGTATAGGTC...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
3UTR-3UTR TCA 90 bp ACATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGCAAATCTTCCTTTACTTTTTaGGGGGACAGGCAATTTCTG +
Preference number: 2 (lower is better)
Translates to: TSHSFCFKCPSLLCPVGKSSFTF*GDRQFL
Trigger: CAGAAATTGCCTGTCCCCTCAAAAAGTAAAGGAAGA...TTTGCCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330289.10
3UTR-3UTR TCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCTCAATAAGCATTTATTaGGATCCTGCTGTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFSISIY*DPAVGL
Trigger: CAGCCCCACAGCAGGATCTCAATAAATGCTTATTGA...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
3UTR-3UTR GCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCATTTATTGAGATCCTaGTGTGGGGCTGAGACCTAT +
Preference number: 2 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFHLLRS*CGAETY
Trigger: ATAGGTCTCAGCCCCACAGCAGGATCTCAATAAATG...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
3UTR-3UTR CCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCTTTGATAACCACCTGTaGTTACTATGCCAGCCTGTC +
Preference number: 2 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFFDNHL*LLCQPV
Trigger: GACAGGCTGGCATAGTAACCACAGGTGGTTATCAAA...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
3UTR-3UTR TCA 90 bp ATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGCAAACTTCTTTCCTTTGCACTTaGTTCTACTCTTGCTTGTTC +
Preference number: 2 (lower is better)
Translates to: IPFLLFQMSVSSLSCRQTSFLCT*FYSCLF
Trigger: GAACAAGCAAGAGTAGAATCAAGTGCAAAGGAAAGA...AGTTTGCCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330289.10
3UTR-3UTR TCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCGAGCATAAGCCAACATaGGTTTCCTTGATTTTCTTG +
Preference number: 2 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFEHKPT*VSLIFL
Trigger: CAAGAAAATCAAGGAAACTCATGTTGGCTTATGCTC...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
3UTR-3UTR CAA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCATCCTCTCCAGAGGTTaGCATATCCATAGATCAGAT +
Preference number: 3 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVILSRG*HIHRSD
Trigger: ATCTGATCTATGGATATGCAAACCTCTGGAGAGGAT...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
3UTR-3UTR CAA 90 bp TCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGCAAACTCCTGTTCTGCTTCCTCTTTCCTTaGCACTTGATTCTACTCTTG +
Preference number: 3 (lower is better)
Translates to: SFCFKCPSLLCPVGKLLFCFLFP*HLILLL
Trigger: CAAGAGTAGAATCAAGTGCAAAGGAAAGAGGAAGCA...GAACAGGAGTTTGCCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330289.10
3UTR-3UTR CAA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCGTTTCCTTGATTTTCTaGTTTATCAACAGCAGTGAC +
Preference number: 3 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVVSLIF*FINSSD
Trigger: GTCACTGCTGTTGATAAACAAGAAAATCAAGGAAAC...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
3UTR-3UTR CAA 90 bp TCTTACATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGGTCTTCCTTTACTTTTaGAGGGGACAGGCAATTTCT +
Preference number: 3 (lower is better)
Translates to: SYIPFLLFQMSVSSLSCRVFLYF*RGQAIS
Trigger: AGAAATTGCCTGTCCCCTCAAAAAGTAAAGGAAGAC...CCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGATGTAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330289.10
3UTR-3UTR CAA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCGTCAATAAGCATTTATaGAGATCCTGCTGTGGGGCT +
Preference number: 3 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFVNKHL*RSCCGA
Trigger: AGCCCCACAGCAGGATCTCAATAAATGCTTATTGAC...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
3UTR-3UTR CAA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCATCCTCTCCAGAGGTTaGCATATCCATAGATCAGAT +
Preference number: 3 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFILSRG*HIHRSD
Trigger: ATCTGATCTATGGATATGCAAACCTCTGGAGAGGAT...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
3UTR-3UTR CAA 90 bp TTCTTACATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGCTCTTTCCTTTGCACTaGATTCTACTCTTGCTTGTT +
Preference number: 3 (lower is better)
Translates to: FLHPIPSVSNVRLFFVLSLFPLH*ILLLLV
Trigger: AACAAGCAAGAGTAGAATCAAGTGCAAAGGAAAGAG...CGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGATGTAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330289.10
3UTR-3UTR CAA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCTATTGGTCTTTTCCTTaGATAACCACCTGTGGTTAC +
Preference number: 3 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFYWSFP*ITTCGY
Trigger: GTAACCACAGGTGGTTATCAAAGGAAAAGACCAATA...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
3UTR-3UTR CAA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCGTTTCCTTGATTTTCTaGTTTATCAACAGCAGTGAC +
Preference number: 3 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFVSLIF*FINSSD
Trigger: GTCACTGCTGTTGATAAACAAGAAAATCAAGGAAAC...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCAGGTGTAGGGCCGACTaGAGCAACAGCGGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVRCRAD*SNSGPD
Trigger: GTCAGGGCCGCTGTTGCTGCAGTCGGCCCTACACCT...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647232.1
CDS-3UTR GCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCCGAAGACTCCACTGGTaGCAAGCGACAGGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVRRLHW*QATGGL
Trigger: CAGCCCGCCTGTCGCTTGGCACCAGTGGAGTCTTCG...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647232.1
CDS-3UTR CCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCAAGCGACAGGCGGGCTaGTGGGCAGACATGGCACCA +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVKRQAG*WADMAP
Trigger: TGGTGCCATGTCTGCCCACCAGCCCGCCTGTCGCTT...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647232.1
CDS-3UTR TCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCGAGGGGGCCGAACCCTaGTACCATGCTCATGACCTG +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVEGAEP*YHAHDL
Trigger: CAGGTCATGAGCATGGTATCAGGGTTCGGCCCCCTC...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCGTCTGTGTCTGTTGGTaGGACAGAGGACGTGGGCGC +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVVCVCW*DRGRGR
Trigger: GCGCCCACGTCCTCTGTCTCACCAACAGACACAGAC...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646012.1
CDS-3UTR TCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCAAAGATCAGGCCTATTaGCCCACCGAACTCGGGCCC +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVKDQAY*PTELGP
Trigger: GGGCCCGAGTTCGGTGGGTCAATAGGCCTGATCTTT...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCTTCGGACACCATCCCTaGAACAGTCTGCCGCCACTG +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVFGHHP*NSLPPL
Trigger: CAGTGGCGGCAGACTGTTTCAGGGATGGTGTCCGAA...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCCCTAAGCCTGAGGCCTaGAGAAGACTTCGGACACCA +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVPKPEA*RRLRTP
Trigger: TGGTGTCCGAAGTCTTCTTCAGGCCTCAGGCTTAGG...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCACAGCAACAGCGGCCCTaGCCCCAGCTCCCATGGCTC +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSQQQRP*PQLPWL
Trigger: GAGCCATGGGAGCTGGGGTCAGGGCCGCTGTTGCTG...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647232.1
CDS-3UTR CCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCTGGTTCCTCTGGGGATaGCATCTTGGGGATCCTCCA +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVWFLWG*HLGDPP
Trigger: TGGAGGATCCCCAAGATGCCATCCCCAGAGGAACCA...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCCCAGCATGGTTCCTCTaGGGATGGCATCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVPAWFL*GWHLGD
Trigger: ATCCCCAAGATGCCATCCCCAGAGGAACCATGCTGG...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCTCCTTGCACAGAGCCTaGAACACTTTGGGTGCGCTG +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVSLHRA*NTLGAL
Trigger: CAGCGCACCCAAAGTGTTCCAGGCTCTGTGCAAGGA...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCCCACCAGTTTCTGGTTaGACTCTCCCACATGCATCG +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVPPVSG*TLPHAS
Trigger: CGATGCATGTGGGAGAGTTCAACCAGAAACTGGTGG...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCTATGGATCCCTTTCTTaGCACGGGAAGGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVYGSLS*HGKAQD
Trigger: GTCCTGAGCCTTCCCGTGGCAAGAAAGGGATCCATA...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCCTGGGGATGGCATCTTaGGGATCCTCCAAATCTCCT +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVLGMAS*GSSKSP
Trigger: AGGAGATTTGGAGGATCCCCAAGATGCCATCCCCAG...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCCGCAGGTCTCCATCCTaGAGATTTGGCATAAGAGGC +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVRRSPS*RFGIRG
Trigger: GCCTCTTATGCCAAATCTCCAGGATGGAGACCTGCG...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCCTAGTCCCATCTACTTaGGAGGCTGAAGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVLVPST*EAEVGG
Trigger: TCCTCCCACTTCAGCCTCCCAAGTAGATGGGACTAG...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646012.1
CDS-3UTR CCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCACATTCTGCGTGTGGTaGCATGCACCTCTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVTFCVW*HAPLVP
Trigger: TGGGACTAGAGGTGCATGCCACCACACGCAGAATGT...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646012.1
CDS-3UTR CCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGGGGGCTTTCAGGACTaGTCCAGCCCTCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSGGFQD*SSPPRQ
Trigger: CTGCCTGGGAGGGCTGGACCAGTCCTGAAAGCCCCC...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647232.1
CDS-3UTR CCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGCTGGTGGGCAGACATaGCACCACCACCGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSAGGQT*HHHRGL
Trigger: AAGCCCCCGGTGGTGGTGCCATGTCTGCCCACCAGC...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647232.1
CDS-3UTR CCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAACGACAGGCGGGCTGGTaGGCAGACATGGCACCACCA +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQRQAGW*ADMAPP
Trigger: TGGTGGTGCCATGTCTGCCCACCAGCCCGCCTGTCG...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647232.1
CDS-3UTR TCA 90 bp GTTCATCCCTCAAAACCTGGATTGAGTGTCCCCTCTTCTGAAAGTCTTCCTTTAAAAGATCAGGCCTATTaGCCCACCGAACTCGGGCCC +
Preference number: 4 (lower is better)
Translates to: VHPSKPGLSVPSSESLPLKDQAY*PTELGP
Trigger: GGGCCCGAGTTCGGTGGGTCAATAGGCCTGATCTTT...TAAAGGAAGACTTTCAGAAGAGGGGACACTCAATCCAGGTTTTGAGGGATGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR TCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCAGCCTTCACCCTTTGTaGAGCGTGGCCCAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVSLHPL*SVAQSF
Trigger: AAAACTTTGGGCCACGCTTCACAAAGGGTGAAGGCT...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCGTGGGAGGTTCTTTGTaGGGATTTCCAACCAAGCCA +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVVGGSL*GFPTKP
Trigger: TGGCTTGGTTGGAAATCCTCACAAAGAACCTCCCAC...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCAATGACTTGGGCCTTTaGCTCCCATTCCATTCCAGC +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVNDLGL*LPFHSS
Trigger: GCTGGAATGGAATGGGAGGCAAAGGCCCAAGTCATT...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCCCCACATGCATCGACTaGCTTGTGTTAATGCTGCCA +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVPTCID*LVLMLP
Trigger: TGGCAGCATTAACACAAGCCAGTCGATGCATGTGGG...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCGCTTCCACCAGTTTCTaGTTGAACTCTCCCACATGC +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVASTSF*LNSPTC
Trigger: GCATGTGGGAGAGTTCAACCAGAAACTGGTGGAAGC...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCGTAGAAGGCGTGTTCTaGAACCTGCGTAGAGTCACA +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVVEGVF*NLRRVT
Trigger: TGTGACTCTACGCAGGTTCCAGAACACGCCTTCTAC...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646012.1
ENST00000647546.1
CDS-3UTR TCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCAAAGATCAGGCCTATTaGCCCACCGAACTCGGGCCC +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFKDQAY*PTELGP
Trigger: GGGCCCGAGTTCGGTGGGTCAATAGGCCTGATCTTT...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCATCCTCCAAATCTCCTaGGATATTGGCACCAGCAAG +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVILQIS*DIGTSK
Trigger: CTTGCTGGTGCCAATATCTCAGGAGATTTGGAGGAT...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCTTCATCAGCCCGTACTaGCATGGTTCATGTCGACAT +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVFISPY*HGSCRH
Trigger: ATGTCGACATGAACCATGTCAGTACGGGCTGATGAA...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGAGGGGGCCGAACCCTaGTACCATGCTCATGACCTG +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSEGAEP*YHAHDL
Trigger: CAGGTCATGAGCATGGTATCAGGGTTCGGCCCCCTC...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAGAGGGGGCCGAACCCTaGTACCATGCTCATGACCTG +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQEGAEP*YHAHDL
Trigger: CAGGTCATGAGCATGGTATCAGGGTTCGGCCCCCTC...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCTTCTTGGTAAAGGCGTaGGTTATGTCCAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVFLVKA*VMSRRA
Trigger: TGCTCTCCTGGACATAACTCACGCCTTTACCAAGAA...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCTTCGGACACCATCCCTaGAACAGTCTGCCGCCACTG +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFFGHHP*NSLPPL
Trigger: CAGTGGCGGCAGACTGTTTCAGGGATGGTGTCCGAA...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCGCCTGGGTGACAGAGTaGGACCCTTTGCGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFAWVTE*DPLRVA
Trigger: AGCAACTCGCAAAGGGTCTCACTCTGTCACCCAGGC...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646012.1
CDS-3UTR GCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCGACTGCCACATTCTTTaGGAGTTGCTCGTGAATCTC +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVDCHIL*ELLVNL
Trigger: GAGATTCACGAGCAACTCGCAAAGAATGTGGCAGTC...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCCCCAGATGTTCAGCATaGATCTTACCAGCACACCTT +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVPRCSA*ILPAHL
Trigger: AAGGTGTGCTGGTAAGATGCATGCTGAACATCTGGG...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCTGGAACACTTTGGGTaGGCTGACAAGGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFLEHFG*ADKGGQ
Trigger: CTGGCCTCCCTTGTCAGCGCACCCAAAGTGTTCCAG...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCAGACTTCACAGCAGATaGAAAGGCCACTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVRLHSR*KGHCSW
Trigger: CCAAGAACAGTGGCCTTTGCATCTGCTGTGAAGTCT...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCACAGTCTGCCGCCACTaGAGCATAAAAAGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVTVCRH*SIKSLD
Trigger: ATCAAGGCTTTTTATGCTGCAGTGGCGGCAGACTGT...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCAGCTTCCATGCTTGTTaGCATGGAGATGAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVSFHAC*HGDEVQ
Trigger: CTGGACTTCATCTCCATGGCAACAAGCATGGAAGCT...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCCCGGATGTCATTGGTTaGATCCACCATCATCGAATC +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVPDVIG*IHHHRI
Trigger: GATTCGATGATGGTGGATCCAACCAATGACATCCGG...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCTCCATCCTGGAGATTTaGCATAAGAGGCATGGAAGC +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVSILEI*HKRHGS
Trigger: GCTTCCATGCCTCTTATGCCAAATCTCCAGGATGGA...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAAAGCGAAGACTCCACTaGTGCCAAGCGACAGGCGGG +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQKRRLH*CQATGG
Trigger: CCCGCCTGTCGCTTGGCACCAGTGGAGTCTTCGCTT...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647232.1
CDS-3UTR TCA 90 bp ATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGCAAACTTTTGCGAGTTGCTCGTaGATCTCAAGCAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: IPFLLFQMSVSSLSCRQTFASCS*ISSRLG
Trigger: ACCCAGCCTGCTTGAGATTCACGAGCAACTCGCAAA...AGTTTGCCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR TCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAAAAGATCAGGCCTATTaGCCCACCGAACTCGGGCCC +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQKDQAY*PTELGP
Trigger: GGGCCCGAGTTCGGTGGGTCAATAGGCCTGATCTTT...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp ATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGCAAACTTCCTTGAGGGAGAGGTaGAGCTCCTTGTTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: IPFLLFQMSVSSLSCRQTSLRER*SSLFPQ
Trigger: CTGAGGAAACAAGGAGCTTCACCTCTCCCTCAAGGA...AGTTTGCCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR TCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCGGAAAAAGTTGGAGATaGTGGGAGCAATGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVGKSWR*WEQWCS
Trigger: TGAACACCATTGCTCCCATCATCTCCAACTTTTTCC...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCATTCGGACACCATCCCTaGAACAGTCTGCCGCCACTG +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSFGHHP*NSLPPL
Trigger: CAGTGGCGGCAGACTGTTTCAGGGATGGTGTCCGAA...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAATTCGGACACCATCCCTaGAACAGTCTGCCGCCACTG +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQFGHHP*NSLPPL
Trigger: CAGTGGCGGCAGACTGTTTCAGGGATGGTGTCCGAA...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCTAAGCCTGAGGCCTaGAGAAGACTTCGGACACCA +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFPKPEA*RRLRTP
Trigger: TGGTGTCCGAAGTCTTCTTCAGGCCTCAGGCTTAGG...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCGGTAACTCTTTTCCTTaGCTGCTTCCAGTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVGNSFP*LLPVLH
Trigger: ATGCAGAACTGGAAGCAGTCAAGGAAAAGAGTTACC...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp TCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGCAAACTCCTGTTCAATGACTTGGGCCTTTaGCTCCCATTCCATTCCAGC +
Preference number: 4 (lower is better)
Translates to: SFCFKCPSLLCPVGKLLFNDLGL*LPFHSS
Trigger: GCTGGAATGGAATGGGAGGCAAAGGCCCAAGTCATT...GAACAGGAGTTTGCCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR GCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCACTGGAACACTTTGGGTaGGCTGACAAGGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSLEHFG*ADKGGQ
Trigger: CTGGCCTCCCTTGTCAGCGCACCCAAAGTGTTCCAG...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAACTGGAACACTTTGGGTaGGCTGACAAGGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQLEHFG*ADKGGQ
Trigger: CTGGCCTCCCTTGTCAGCGCACCCAAAGTGTTCCAG...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCTGTAGATGTTGTCCTTaGACAGAGCCTGGAACACTT +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVCRCCP*TEPGTL
Trigger: AAGTGTTCCAGGCTCTGTGCAAGGACAACATCTACA...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCGATGACAAACATGACTaGACAGCACAAAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVDDKHD*TAQNSS
Trigger: GGAGCTGTTTTGTGCTGTGCAGTCATGTTTGTCATC...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCATAGGTGATGACAGCTaGCCACCAGTTGATGACAAA +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVIGDDS*PPVDDK
Trigger: TTTGTCATCAACTGGTGGGCAGCTGTCATCACCTAT...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCTTGAACTCTCCCACATaGATCGACTGGCTTGTGTTA +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVLNSPT*IDWLVL
Trigger: TAACACAAGCCAGTCGATGCATGTGGGAGAGTTCAA...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCTTAGCAGCTCTGGAGTaGTCCTGTAAGAGTTCATTC +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVLAALE*SCKSSF
Trigger: GAATGAACTCTTACAGGAGCACTCCAGAGCTGCTAA...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAGCGTGTTCTGGAACCTaGGTAGAGTCACAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQACSGT*VESQGP
Trigger: AGGGCCCTGTGACTCTACGCAGGTTCCAGAACACGC...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646012.1
ENST00000647546.1
CDS-3UTR GCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCGTGACTGCCACATTCTaGGTGTGGTGGCATGCACCT +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFVTATF*VWWHAP
Trigger: AGGTGCATGCCACCACACGCAGAATGTGGCAGTCAC...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646012.1
CDS-3UTR CCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCGATAGTACTCTATCTTaGGAACGGCATCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVDSTLS*ERHPWC
Trigger: ACACCATGGATGCCGTTCCCAAGATAGAGTACTATC...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCACCCTTTGTGAAGCGTaGCCCAAAGTTTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVTLCEA*PKVFCK
Trigger: TTTGCAGAAAACTTTGGGCCACGCTTCACAAAGGGT...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCTGGTTCCTCTGGGGATaGCATCTTGGGGATCCTCCA +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFWFLWG*HLGDPP
Trigger: TGGAGGATCCCCAAGATGCCATCCCCAGAGGAACCA...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCAGCATGGTTCCTCTaGGGATGGCATCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFPAWFL*GWHLGD
Trigger: ATCCCCAAGATGCCATCCCCAGAGGAACCATGCTGG...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCATTCATGTTCCCGGTaGCATCTCGGACCACACAGG +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFHSCSR*HLGPHR
Trigger: CCTGTGTGGTCCGAGATGCCACCGGGAACATGAATG...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCGCCCCAGTTCACATCTaGCTTCTTACAAGTCACATA +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVAPVHI*LLTSHI
Trigger: TATGTGACTTGTAAGAAGCCAGATGTGAACTGGGGC...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCCGTGGTCTTCCACTGTaGTTAATTCCAGAGCATTGT +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVRGLPL*LIPEHC
Trigger: ACAATGCTCTGGAATTAACCACAGTGGAAGACCACG...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCCCAGCTCTCTTTGTTTaGCCTAATGTTGATGTCACC +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVPALFV*PNVDVT
Trigger: GGTGACATCAACATTAGGCCAAACAAAGAGAGCTGG...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCTGGTTAGCGCTTTCCTaGCCTAGAAGTGTAAATGTC +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVWLALS*PRSVNV
Trigger: GACATTTACACTTCTAGGCCAGGAAAGCGCTAACCA...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646012.1
ENST00000647546.1
CDS-3UTR CCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAAGAGTCACAGGGCCCTaGTTAGCGCTTTCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQRVTGP*LALSWP
Trigger: AGGCCAGGAAAGCGCTAACCAGGGCCCTGTGACTCT...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646012.1
ENST00000647546.1
CDS-3UTR CCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAAGAGTCACAGGGCCCTaGTTAGCGCTTTCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSRVTGP*LALSWP
Trigger: AGGCCAGGAAAGCGCTAACCAGGGCCCTGTGACTCT...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646012.1
ENST00000647546.1
CDS-3UTR TCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCGGTATTACTGGGCACTaGATCCAGAAATACATTGGA +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVGITGH*IQKYIG
Trigger: TCCAATGTATTTCTGGATTCAGTGCCCAGTAATACC...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCTGCTATCGCAGAAGTTaGCAACCCAGTAATAGAAGT +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVCYRRS*QPSNRS
Trigger: ACTTCTATTACTGGGTTGTCAACTTCTGCGATAGCA...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380993.8
ENST00000646012.1
ENST00000647546.1
CDS-3UTR TCA 90 bp ACATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGCAAAAGCCTTCACCCTTTGTaGAGCGTGGCCCAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: TSHSFCFKCPSLLCPVGKSLHPL*SVAQSF
Trigger: AAAACTTTGGGCCACGCTTCACAAAGGGTGAAGGCT...TTTGCCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR TCA 90 bp ACATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGCAAATGCCTCCAAATCTCCTaGGATATTGGCACCAGCAAG +
Preference number: 4 (lower is better)
Translates to: TSHSFCFKCPSLLCPVGKCLQIS*DIGTSK
Trigger: CTTGCTGGTGCCAATATCTCAGGAGATTTGGAGGCA...TTTGCCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR TCA 90 bp TCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGCAAACTCCTGTTCCCTCAAAACCTGGATTaGGTGTCCCCTCTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: SFCFKCPSLLCPVGKLLFPQNLD*VSPLLK
Trigger: TTTCAGAAGAGGGGACACTCAATCCAGGTTTTGAGG...GAACAGGAGTTTGCCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR TCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCAACCCACATGCTGCTaGACCATTGCAGTTCATCCC +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFQPTCC*TIAVHP
Trigger: GGGATGAACTGCAATGGTTCAGCAGCATGTGGGTTG...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCACCTAAGCCTGAGGCCTaGAGAAGACTTCGGACACCA +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSPKPEA*RRLRTP
Trigger: TGGTGTCCGAAGTCTTCTTCAGGCCTCAGGCTTAGG...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAAGGTCAAGGCTGCAGTaGACCACAGTTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSRSRLQ*TTVVPL
Trigger: CAGTGGCACAACTGTGGTTCACTGCAGCCTTGACCT...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646012.1
CDS-3UTR TCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAAGTGGGAGGATTGCTTaGGCTAGGGAGGTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQSGRIA*AREVKA
Trigger: AGCCTTGACCTCCCTAGCTCAAGCAATCCTCCCACT...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646012.1
CDS-3UTR GCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCACTCTTTTCCTTGACTaGTTCCAGTTCTGCATCTGT +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVTLFLD*FQFCIC
Trigger: ACAGATGCAGAACTGGAAGCAGTCAAGGAAAAGAGT...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCTATGGATCCCTTTCTTaGCACGGGAAGGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFYGSLS*HGKAQD
Trigger: GTCCTGAGCCTTCCCGTGGCAAGAAAGGGATCCATA...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCGCTGCACTGCTCTCATaGTTCTCATTTATGACACTA +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVAALLS*FSFMTL
Trigger: TAGTGTCATAAATGAGAACCATGAGAGCAGTGCAGC...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCTGGGGATGGCATCTTaGGGATCCTCCAAATCTCCT +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFLGMAS*GSSKSP
Trigger: AGGAGATTTGGAGGATCCCCAAGATGCCATCCCCAG...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAATGGTTCCTCTGGGGATaGCATCTTGGGGATCCTCCA +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQWFLWG*HLGDPP
Trigger: TGGAGGATCCCCAAGATGCCATCCCCAGAGGAACCA...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAACCAGCATGGTTCCTCTaGGGATGGCATCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQPAWFL*GWHLGD
Trigger: ATCCCCAAGATGCCATCCCCAGAGGAACCATGCTGG...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCACCAGCATGGTTCCTCTaGGGATGGCATCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSPAWFL*GWHLGD
Trigger: ATCCCCAAGATGCCATCCCCAGAGGAACCATGCTGG...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCACATTCATGTTCCCGGTaGCATCTCGGACCACACAGG +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSHSCSR*HLGPHR
Trigger: CCTGTGTGGTCCGAGATGCCACCGGGAACATGAATG...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAACATTCATGTTCCCGGTaGCATCTCGGACCACACAGG +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQHSCSR*HLGPHR
Trigger: CCTGTGTGGTCCGAGATGCCACCGGGAACATGAATG...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAATCCTTGCACAGAGCCTaGAACACTTTGGGTGCGCTG +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQSLHRA*NTLGAL
Trigger: CAGCGCACCCAAAGTGTTCCAGGCTCTGTGCAAGGA...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCATCCTTGCACAGAGCCTaGAACACTTTGGGTGCGCTG +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSSLHRA*NTLGAL
Trigger: CAGCGCACCCAAAGTGTTCCAGGCTCTGTGCAAGGA...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCGCAGGTCTCCATCCTaGAGATTTGGCATAAGAGGC +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFRRSPS*RFGIRG
Trigger: GCCTCTTATGCCAAATCTCCAGGATGGAGACCTGCG...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCTGTTCCCCAGCCTATTaGTCTTTTCCTTTGATAACC +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVCSPAY*SFPLIT
Trigger: GGTTATCAAAGGAAAAGACCAATAGGCTGGGGAACA...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCAGTAGACTTAAGTGTTaGCACGTTTGTCTGTGTTCG +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVSRLKC*HVCLCS
Trigger: CGAACACAGACAAACGTGCCAACACTTAAGTCTACT...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCACAACCCACATGCTGCTaGACCATTGCAGTTCATCCC +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSQPTCC*TIAVHP
Trigger: GGGATGAACTGCAATGGTTCAGCAGCATGTGGGTTG...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCCAAATGCATCATGTATaGTTCCCACGTAGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVQMHHV*FPRSSQ
Trigger: TTGAGAACTACGTGGGAATCATACATGATGCATTTG...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAACCACCAGTTTCTGGTTaGACTCTCCCACATGCATCG +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQPPVSG*TLPHAS
Trigger: CGATGCATGTGGGAGAGTTCAACCAGAAACTGGTGG...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCACCACCAGTTTCTGGTTaGACTCTCCCACATGCATCG +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSPPVSG*TLPHAS
Trigger: CGATGCATGTGGGAGAGTTCAACCAGAAACTGGTGG...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCTGTTTCTTTTTAAATTaGGTGCTGGCTTCCACCAGT +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVCFFLN*VLASTS
Trigger: ACTGGTGGAAGCCAGCACTCAATTTAAAAAGAAACA...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp TCTTACATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGATTGTCATCTGCAGCTaGACTGCTCTCATGGTTCTC +
Preference number: 4 (lower is better)
Translates to: SYIPFLLFQMSVSSLSCRIVICS*TALMVL
Trigger: GAGAACCATGAGAGCAGTGCAGCTGCAGATGACAAT...CCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGATGTAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR GCA 90 bp TCTTACATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGGACTGCCACATTCTTTaGGAGTTGCTCGTGAATCTC +
Preference number: 4 (lower is better)
Translates to: SYIPFLLFQMSVSSLSCRDCHIL*ELLVNL
Trigger: GAGATTCACGAGCAACTCGCAAAGAATGTGGCAGTC...CCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGATGTAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR GCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCCATAGCAACAGCCACTaGATTAGCAAAAGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVHSNSH*ISKSKD
Trigger: ATCTTTGCTTTTGCTAATGCAGTGGCTGTTGCTATG...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCAATGACTTGGGCCTTTaGCTCCCATTCCATTCCAGC +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFNDLGL*LPFHSS
Trigger: GCTGGAATGGAATGGGAGGCAAAGGCCCAAGTCATT...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp ACATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGCAAAGGGACAGGCAATTTCTaGTTCCTCTTTCCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: TSHSFCFKCPSLLCPVGKGTGNF*FLFPLH
Trigger: GTGCAAAGGAAAGAGGAAGCAGAAATTGCCTGTCCC...TTTGCCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR GCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAATATGGATCCCTTTCTTaGCACGGGAAGGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQYGSLS*HGKAQD
Trigger: GTCCTGAGCCTTCCCGTGGCAAGAAAGGGATCCATA...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCTCCTCTCCAGAGGTTTaGATATCCATAGATCAGATT +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVSSPEV*ISIDQI
Trigger: AATCTGATCTATGGATATGCAAACCTCTGGAGAGGA...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAAGTGAACCACAGTTGTaGCACTGCATTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSSEPQL*HCIPAW
Trigger: CCAGGCTGGAATGCAGTGGCACAACTGTGGTTCACT...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646012.1
CDS-3UTR CCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCGGTTTCTTCATAATGTaGTGGGTCAGTATTGTCATC +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVGFFIM*WVSIVI
Trigger: GATGACAATACTGACCCACCACATTATGAAGAAACC...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp ATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGCAAACTCCGGATGTCATTGGTTaGATCCACCATCATCGAATC +
Preference number: 4 (lower is better)
Translates to: IPFLLFQMSVSSLSCRQTPDVIG*IHHHRI
Trigger: GATTCGATGATGGTGGATCCAACCAATGACATCCGG...AGTTTGCCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR CCA 90 bp TCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGCAAACTCCTGTTCACCCTTTGTGAAGCGTaGCCCAAAGTTTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: SFCFKCPSLLCPVGKLLFTLCEA*PKVFCK
Trigger: TTTGCAGAAAACTTTGGGCCACGCTTCACAAAGGGT...GAACAGGAGTTTGCCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR CCA 90 bp TCTTACATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGTCATCCCTCAAAACCTaGATTGAGTGTCCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SYIPFLLFQMSVSSLSCRSSLKT*IECPLF
Trigger: GAAGAGGGGACACTCAATCCAGGTTTTGAGGGATGA...CCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGATGTAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR CCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAACTGGGGATGGCATCTTaGGGATCCTCCAAATCTCCT +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQLGMAS*GSSKSP
Trigger: AGGAGATTTGGAGGATCCCCAAGATGCCATCCCCAG...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAACGCAGGTCTCCATCCTaGAGATTTGGCATAAGAGGC +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQRRSPS*RFGIRG
Trigger: GCCTCTTATGCCAAATCTCCAGGATGGAGACCTGCG...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCACGCAGGTCTCCATCCTaGAGATTTGGCATAAGAGGC +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSRRSPS*RFGIRG
Trigger: GCCTCTTATGCCAAATCTCCAGGATGGAGACCTGCG...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCGAGATGTCAAATCCTTaGCTGATTCTGACTATAACC +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVEMSNP*LILTIT
Trigger: GGTTATAGTCAGAATCAGCCAAGGATTTGACATCTC...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCGCTTCCACCAGTTTCTaGTTGAACTCTCCCACATGC +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFASTSF*LNSPTC
Trigger: GCATGTGGGAGAGTTCAACCAGAAACTGGTGGAAGC...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCTCTTTGCAGCTTTCATaGAGACGATATGGTTCAATC +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVSLQLS*RRYGSI
Trigger: GATTGAACCATATCGTCTCCATGAAAGCTGCAAAGA...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCGTAGAAGGCGTGTTCTaGAACCTGCGTAGAGTCACA +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFVEGVF*NLRRVT
Trigger: TGTGACTCTACGCAGGTTCCAGAACACGCCTTCTAC...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646012.1
ENST00000647546.1
CDS-3UTR TCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCTTCACAACACCAGCTTaGTCATCTTCCTTATTTTCA +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVFTTPA*SSSLFS
Trigger: TGAAAATAAGGAAGATGATCAAGCTGGTGTTGTGAA...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAAGCCTTCACCCTTTGTaGAGCGTGGCCCAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQSLHPL*SVAQSF
Trigger: AAAACTTTGGGCCACGCTTCACAAAGGGTGAAGGCT...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAAGCCTTCACCCTTTGTaGAGCGTGGCCCAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSSLHPL*SVAQSF
Trigger: AAAACTTTGGGCCACGCTTCACAAAGGGTGAAGGCT...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCTTCATGTCGACATCTTaGGAAGTCATAGCCCAACCC +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFFMSTS*EVIAQP
Trigger: GGGTTGGGCTATGACTTCTCAAGATGTCGACATGAA...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCTTCATCAGCCCGTACTaGCATGGTTCATGTCGACAT +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFFISPY*HGSCRH
Trigger: ATGTCGACATGAACCATGTCAGTACGGGCTGATGAA...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCATTAATAAGTGCATATaGGGCCAGGAAAAAGTTGGA +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVINKCI*GQEKVG
Trigger: TCCAACTTTTTCCTGGCCTCATATGCACTTATTAAT...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCTTCTTGGTAAAGGCGTaGGTTATGTCCAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFFLVKA*VMSRRA
Trigger: TGCTCTCCTGGACATAACTCACGCCTTTACCAAGAA...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCTTCTTCAATGCGGTTaGTCTTCCCTCCCACATAGA +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFLLQCG*SSLPHR
Trigger: TCTATGTGGGAGGGAAGATCAACCGCATTGAAGAAG...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGTGGGAGGTTCTTTGTaGGGATTTCCAACCAAGCCA +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSVGGSL*GFPTKP
Trigger: TGGCTTGGTTGGAAATCCTCACAAAGAACCTCCCAC...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAGTGGGAGGTTCTTTGTaGGGATTTCCAACCAAGCCA +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQVGGSL*GFPTKP
Trigger: TGGCTTGGTTGGAAATCCTCACAAAGAACCTCCCAC...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCTTGTTGCCATGGAGATaGAGTCCAGCCAGTAGACTT +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFLLPWR*SPASRL
Trigger: AAGTCTACTGGCTGGACTTCATCTCCATGGCAACAA...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAATGGGTGTTAGGGCTTTaGTGTCTAATCCCGCTTTGC +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQWVLGL*CLIPLC
Trigger: GCAAAGCGGGATTAGACATCAAAGCCCTAACACCCA...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647232.1
CDS-3UTR GCA 90 bp GTTCATCCCTCAAAACCTGGATTGAGTGTCCCCTCTTCTGAAAGTCTTCCTTTACATCTGCAGCTGCACTaGTCTCATGGTTCTCATTTA +
Preference number: 4 (lower is better)
Translates to: VHPSKPGLSVPSSESLPLHLQLH*SHGSHL
Trigger: TAAATGAGAACCATGAGAGCAGTGCAGCTGCAGATG...TAAAGGAAGACTTTCAGAAGAGGGGACACTCAATCCAGGTTTTGAGGGATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR GCA 90 bp TTCTTACATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGTCAGTATTGTCATCTaGAGCTGCACTGCTCTCATG +
Preference number: 4 (lower is better)
Translates to: FLHPIPSVSNVRLFFVLSVSIVI*SCTALM
Trigger: CATGAGAGCAGTGCAGCTGCAGATGACAATACTGAC...CGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGATGTAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR GCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCGTCAGTATTGTCATCTaGAGCTGCACTGCTCTCATG +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFVSIVI*SCTALM
Trigger: CATGAGAGCAGTGCAGCTGCAGATGACAATACTGAC...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp TTCTTACATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGCCCAGATGTTCAGCATaGATCTTACCAGCACACCTT +
Preference number: 4 (lower is better)
Translates to: FLHPIPSVSNVRLFFVLSPRCSA*ILPAHL
Trigger: AAGGTGTGCTGGTAAGATGCATGCTGAACATCTGGG...CGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGATGTAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR GCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGATGTTCAGCATaGATCTTACCAGCACACCTT +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFPRCSA*ILPAHL
Trigger: AAGGTGTGCTGGTAAGATGCATGCTGAACATCTGGG...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAAATGACTTGGGCCTTTaGCTCCCATTCCATTCCAGC +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQNDLGL*LPFHSS
Trigger: GCTGGAATGGAATGGGAGGCAAAGGCCCAAGTCATT...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCAGACTTCACAGCAGATaGAAAGGCCACTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFRLHSR*KGHCSW
Trigger: CCAAGAACAGTGGCCTTTGCATCTGCTGTGAAGTCT...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCATCCCTGAAACAGTCTaGCGCCACTGCAGCATAAAA +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFIPETV*RHCSIK
Trigger: TTTTATGCTGCAGTGGCGGCAGACTGTTTCAGGGAT...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCCAGTTGTTAAATCTTTaGAGCTTTCATGGAGACGAT +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVQLLNL*SFHGDD
Trigger: ATCGTCTCCATGAAAGCTGCAAAGATTTAACAACTG...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCACAGAGTGAGACCCTTTaGGAGTTGCTCGTGAATCTC +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSQSETL*ELLVNL
Trigger: GAGATTCACGAGCAACTCGCAAAGGGTCTCACTCTG...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646012.1
CDS-3UTR GCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCATGTCTAATCCCGCTTTaGAAGCGAAGACTCCACTGG +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSCLIPL*KRRLHW
Trigger: CCAGTGGAGTCTTCGCTTGCAAAGCGGGATTAGACA...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647232.1
CDS-3UTR CCA 90 bp GTTCATCCCTCAAAACCTGGATTGAGTGTCCCCTCTTCTGAAAGTCTTCCTTTAGATAGTACTCTATCTTaGGAACGGCATCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: VHPSKPGLSVPSSESLPLDSTLS*ERHPWC
Trigger: ACACCATGGATGCCGTTCCCAAGATAGAGTACTATC...TAAAGGAAGACTTTCAGAAGAGGGGACACTCAATCCAGGTTTTGAGGGATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR CCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCGGATGTCATTGGTTaGATCCACCATCATCGAATC +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFPDVIG*IHHHRI
Trigger: GATTCGATGATGGTGGATCCAACCAATGACATCCGG...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCACCATGCTCATGACCTaGAAATTGTTCATCAGCCCG +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFTMLMT*KLFISP
Trigger: CGGGCTGATGAACAATTTCCAGGTCATGAGCATGGT...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAGAGCAGGTCTTGTCATaGGTCCCCCTGTTAAGACAA +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQEQVLS*VPLLRQ
Trigger: TTGTCTTAACAGGGGGACCCATGACAAGACCTGCTC...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGAGCAGGTCTTGTCATaGGTCCCCCTGTTAAGACAA +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSEQVLS*VPLLRQ
Trigger: TTGTCTTAACAGGGGGACCCATGACAAGACCTGCTC...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCACCCACATGCATCGACTaGCTTGTGTTAATGCTGCCA +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSPTCID*LVLMLP
Trigger: TGGCAGCATTAACACAAGCCAGTCGATGCATGTGGG...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAACCCACATGCATCGACTaGCTTGTGTTAATGCTGCCA +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQPTCID*LVLMLP
Trigger: TGGCAGCATTAACACAAGCCAGTCGATGCATGTGGG...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGCTTCCACCAGTTTCTaGTTGAACTCTCCCACATGC +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSASTSF*LNSPTC
Trigger: GCATGTGGGAGAGTTCAACCAGAAACTGGTGGAAGC...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
3UTR CAA 72 bp ATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTaGTCCTGTCGGCAAACTCCTGTTCATCCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: IPFLLFQMSVSS*SCRQTPVHPSK
Trigger: TTTTGAGGGATGAACAGGAGTTTGCCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR TCA 90 bp GTTCATCCCTCAAAACCTGGATTGAGTGTCCCCTCTTCTGAAAGTCTTCCTTTAGGTATTACTGGGCACTaGATCCAGAAATACATTGGA +
Preference number: 4 (lower is better)
Translates to: VHPSKPGLSVPSSESLPLGITGH*IQKYIG
Trigger: TCCAATGTATTTCTGGATTCAGTGCCCAGTAATACC...TAAAGGAAGACTTTCAGAAGAGGGGACACTCAATCCAGGTTTTGAGGGATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR TCA 90 bp GTTCATCCCTCAAAACCTGGATTGAGTGTCCCCTCTTCTGAAAGTCTTCCTTTATGCTATCGCAGAAGTTaGCAACCCAGTAATAGAAGT +
Preference number: 4 (lower is better)
Translates to: VHPSKPGLSVPSSESLPLCYRRS*QPSNRS
Trigger: ACTTCTATTACTGGGTTGTCAACTTCTGCGATAGCA...TAAAGGAAGACTTTCAGAAGAGGGGACACTCAATCCAGGTTTTGAGGGATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR TCA 90 bp GTTCATCCCTCAAAACCTGGATTGAGTGTCCCCTCTTCTGAAAGTCTTCCTTTATCTTCCTTTACTTTTTaGGGGGACAGGCAATTTCTG +
Preference number: 4 (lower is better)
Translates to: VHPSKPGLSVPSSESLPLSSFTF*GDRQFL
Trigger: CAGAAATTGCCTGTCCCCTCAAAAAGTAAAGGAAGA...TAAAGGAAGACTTTCAGAAGAGGGGACACTCAATCCAGGTTTTGAGGGATGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR TCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAATCCTCCAAATCTCCTaGGATATTGGCACCAGCAAG +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSILQIS*DIGTSK
Trigger: CTTGCTGGTGCCAATATCTCAGGAGATTTGGAGGAT...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAATCCTCCAAATCTCCTaGGATATTGGCACCAGCAAG +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQILQIS*DIGTSK
Trigger: CTTGCTGGTGCCAATATCTCAGGAGATTTGGAGGAT...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCATTCATGTCGACATCTTaGGAAGTCATAGCCCAACCC +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSFMSTS*EVIAQP
Trigger: GGGTTGGGCTATGACTTCTCAAGATGTCGACATGAA...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCATTCATCAGCCCGTACTaGCATGGTTCATGTCGACAT +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSFISPY*HGSCRH
Trigger: ATGTCGACATGAACCATGTCAGTACGGGCTGATGAA...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCGGAAAAAGTTGGAGATaGTGGGAGCAATGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFGKSWR*WEQWCS
Trigger: TGAACACCATTGCTCCCATCATCTCCAACTTTTTCC...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCATTCTTGGTAAAGGCGTaGGTTATGTCCAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSFLVKA*VMSRRA
Trigger: TGCTCTCCTGGACATAACTCACGCCTTTACCAAGAA...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCACTTCTTCAATGCGGTTaGTCTTCCCTCCCACATAGA +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSLLQCG*SSLPHR
Trigger: TCTATGTGGGAGGGAAGATCAACCGCATTGAAGAAG...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAACTTCTTCAATGCGGTTaGTCTTCCCTCCCACATAGA +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQLLQCG*SSLPHR
Trigger: TCTATGTGGGAGGGAAGATCAACCGCATTGAAGAAG...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCGGTAACTCTTTTCCTTaGCTGCTTCCAGTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFGNSFP*LLPVLH
Trigger: ATGCAGAACTGGAAGCAGTCAAGGAAAAGAGTTACC...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGACCTATACCAGGGCTaGGAAGCAAACACTCAAAAC +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSDLYQG*EANTQN
Trigger: GTTTTGAGTGTTTGCTTCTCAGCCCTGGTATAGGTC...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCATTGTTGCCATGGAGATaGAGTCCAGCCAGTAGACTT +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSLLPWR*SPASRL
Trigger: AAGTCTACTGGCTGGACTTCATCTCCATGGCAACAA...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCTTCTGGAACCTGGAATaGATTGAACAGTCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFFWNLE*IEQSGC
Trigger: ACACCCAGACTGTTCAATTCATTCCAGGTTCCAGAA...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647232.1
CDS-3UTR GCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCATCTGCAGCTGCACTaGTCTCATGGTTCTCATTTA +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFHLQLH*SHGSHL
Trigger: TAAATGAGAACCATGAGAGCAGTGCAGCTGCAGATG...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGTCAGTATTGTCATCTaGAGCTGCACTGCTCTCATG +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSVSIVI*SCTALM
Trigger: CATGAGAGCAGTGCAGCTGCAGATGACAATACTGAC...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAGACTGCCACATTCTTTaGGAGTTGCTCGTGAATCTC +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQDCHIL*ELLVNL
Trigger: GAGATTCACGAGCAACTCGCAAAGAATGTGGCAGTC...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGACTGCCACATTCTTTaGGAGTTGCTCGTGAATCTC +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSDCHIL*ELLVNL
Trigger: GAGATTCACGAGCAACTCGCAAAGAATGTGGCAGTC...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCACCCAGATGTTCAGCATaGATCTTACCAGCACACCTT +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSPRCSA*ILPAHL
Trigger: AAGGTGTGCTGGTAAGATGCATGCTGAACATCTGGG...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAACCCAGATGTTCAGCATaGATCTTACCAGCACACCTT +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQPRCSA*ILPAHL
Trigger: AAGGTGTGCTGGTAAGATGCATGCTGAACATCTGGG...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCTGTAGATGTTGTCCTTaGACAGAGCCTGGAACACTT +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFCRCCP*TEPGTL
Trigger: AAGTGTTCCAGGCTCTGTGCAAGGACAACATCTACA...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCGATGACAAACATGACTaGACAGCACAAAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFDDKHD*TAQNSS
Trigger: GGAGCTGTTTTGTGCTGTGCAGTCATGTTTGTCATC...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCATAGGTGATGACAGCTaGCCACCAGTTGATGACAAA +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFIGDDS*PPVDDK
Trigger: TTTGTCATCAACTGGTGGGCAGCTGTCATCACCTAT...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAAGACTTCACAGCAGATaGAAAGGCCACTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSRLHSR*KGHCSW
Trigger: CCAAGAACAGTGGCCTTTGCATCTGCTGTGAAGTCT...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAACAGTCTGCCGCCACTaGAGCATAAAAAGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSTVCRH*SIKSLD
Trigger: ATCAAGGCTTTTTATGCTGCAGTGGCGGCAGACTGT...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAACAGTCTGCCGCCACTaGAGCATAAAAAGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQTVCRH*SIKSLD
Trigger: ATCAAGGCTTTTTATGCTGCAGTGGCGGCAGACTGT...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAATCCCTGAAACAGTCTaGCGCCACTGCAGCATAAAA +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSIPETV*RHCSIK
Trigger: TTTTATGCTGCAGTGGCGGCAGACTGTTTCAGGGAT...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAATCCCTGAAACAGTCTaGCGCCACTGCAGCATAAAA +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQIPETV*RHCSIK
Trigger: TTTTATGCTGCAGTGGCGGCAGACTGTTTCAGGGAT...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCTTAGCAGCTCTGGAGTaGTCCTGTAAGAGTTCATTC +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFLAALE*SCKSSF
Trigger: GAATGAACTCTTACAGGAGCACTCCAGAGCTGCTAA...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCACCTGTGGTTACTATaGCAGCCTGTCAATAAGCAT +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFHLWLL*QPVNKH
Trigger: ATGCTTATTGACAGGCTGGCATAGTAACCACAGGTG...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCAATCCAGAAATACATTaGAAGAGTTGTTCAGTGACA +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVNPEIH*KSCSVT
Trigger: TGTCACTGAACAACTCTTCCAATGTATTTCTGGATT...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp GTTCATCCCTCAAAACCTGGATTGAGTGTCCCCTCTTCTGAAAGTCTTCCTTTAGCTGCACTGCTCTCATaGTTCTCATTTATGACACTA +
Preference number: 4 (lower is better)
Translates to: VHPSKPGLSVPSSESLPLAALLS*FSFMTL
Trigger: TAGTGTCATAAATGAGAACCATGAGAGCAGTGCAGC...TAAAGGAAGACTTTCAGAAGAGGGGACACTCAATCCAGGTTTTGAGGGATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR CCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAACCGGATGTCATTGGTTaGATCCACCATCATCGAATC +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQPDVIG*IHHHRI
Trigger: GATTCGATGATGGTGGATCCAACCAATGACATCCGG...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCACCCTTTGTGAAGCGTaGCCCAAAGTTTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFTLCEA*PKVFCK
Trigger: TTTGCAGAAAACTTTGGGCCACGCTTCACAAAGGGT...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAACCATGCTCATGACCTaGAAATTGTTCATCAGCCCG +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSTMLMT*KLFISP
Trigger: CGGGCTGATGAACAATTTCCAGGTCATGAGCATGGT...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAATCCATCCTGGAGATTTaGCATAAGAGGCATGGAAGC +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQSILEI*HKRHGS
Trigger: GCTTCCATGCCTCTTATGCCAAATCTCCAGGATGGA...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCATCCATCCTGGAGATTTaGCATAAGAGGCATGGAAGC +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSSILEI*HKRHGS
Trigger: GCTTCCATGCCTCTTATGCCAAATCTCCAGGATGGA...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCGCCCCAGTTCACATCTaGCTTCTTACAAGTCACATA +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFAPVHI*LLTSHI
Trigger: TATGTGACTTGTAAGAAGCCAGATGTGAACTGGGGC...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCGTGGTCTTCCACTGTaGTTAATTCCAGAGCATTGT +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFRGLPL*LIPEHC
Trigger: ACAATGCTCTGGAATTAACCACAGTGGAAGACCACG...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCATGTCACCGATGATATaGATGTCTGCAAATTTTATC +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVMSPMI*MSANFI
Trigger: GATAAAATTTGCAGACATCCATATCATCGGTGACAT...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCAGCTCTCTTTGTTTaGCCTAATGTTGATGTCACC +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFPALFV*PNVDVT
Trigger: GGTGACATCAACATTAGGCCAAACAAAGAGAGCTGG...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCTTCATGGAGACGATATaGTTCAATCATCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVFMETI*FNHLFK
Trigger: TTTGAAGAGATGATTGAACCATATCGTCTCCATGAA...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCACAACAAATCCGATATaGATCCCTTTCTTGCCACGG +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFTTNPI*IPFLPR
Trigger: CCGTGGCAAGAAAGGGATCCATATCGGATTTGTTGT...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCGCGTGTTCTGGAACCTaGAATGAATTGAACAGTCTG +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFACSGT*NELNSL
Trigger: CAGACTGTTCAATTCATTCCAGGTTCCAGAACACGC...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647232.1
CDS-3UTR TCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCGGTATTACTGGGCACTaGATCCAGAAATACATTGGA +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFGITGH*IQKYIG
Trigger: TCCAATGTATTTCTGGATTCAGTGCCCAGTAATACC...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCTGCTATCGCAGAAGTTaGCAACCCAGTAATAGAAGT +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFCYRRS*QPSNRS
Trigger: ACTTCTATTACTGGGTTGTCAACTTCTGCGATAGCA...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380993.8
ENST00000646012.1
ENST00000647546.1
CDS-3UTR TCA 90 bp GTTCATCCCTCAAAACCTGGATTGAGTGTCCCCTCTTCTGAAAGTCTTCCTTTATCTTTCCTTTGCACTTaGTTCTACTCTTGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: VHPSKPGLSVPSSESLPLSFLCT*FYSCLF
Trigger: GAACAAGCAAGAGTAGAATCAAGTGCAAAGGAAAGA...TAAAGGAAGACTTTCAGAAGAGGGGACACTCAATCCAGGTTTTGAGGGATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR TCA 90 bp TTCTTACATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGAGTGTCCCCTCTTCTaGAAGTCTTCCTTTACTTTT +
Preference number: 4 (lower is better)
Translates to: FLHPIPSVSNVRLFFVLSECPLF*KSSFTF
Trigger: AAAAGTAAAGGAAGACTTTCAGAAGAGGGGACACTC...CGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGATGTAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR TCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGGAAAAAGTTGGAGATaGTGGGAGCAATGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSGKSWR*WEQWCS
Trigger: TGAACACCATTGCTCCCATCATCTCCAACTTTTTCC...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAGGAAAAAGTTGGAGATaGTGGGAGCAATGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQGKSWR*WEQWCS
Trigger: TGAACACCATTGCTCCCATCATCTCCAACTTTTTCC...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGGTAACTCTTTTCCTTaGCTGCTTCCAGTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSGNSFP*LLPVLH
Trigger: ATGCAGAACTGGAAGCAGTCAAGGAAAAGAGTTACC...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAATCAATAAGCATTTATTaGGATCCTGCTGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQSISIY*DPAVGL
Trigger: CAGCCCCACAGCAGGATCTCAATAAATGCTTATTGA...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCATCAATAAGCATTTATTaGGATCCTGCTGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSSISIY*DPAVGL
Trigger: CAGCCCCACAGCAGGATCTCAATAAATGCTTATTGA...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCACATCTGCAGCTGCACTaGTCTCATGGTTCTCATTTA +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSHLQLH*SHGSHL
Trigger: TAAATGAGAACCATGAGAGCAGTGCAGCTGCAGATG...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAACATCTGCAGCTGCACTaGTCTCATGGTTCTCATTTA +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQHLQLH*SHGSHL
Trigger: TAAATGAGAACCATGAGAGCAGTGCAGCTGCAGATG...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp ACATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGCAAACATAGCAACAGCCACTaGATTAGCAAAAGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: TSHSFCFKCPSLLCPVGKHSNSH*ISKSKD
Trigger: ATCTTTGCTTTTGCTAATGCAGTGGCTGTTGCTATG...TTTGCCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR GCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCATGTAGATGTTGTCCTTaGACAGAGCCTGGAACACTT +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSCRCCP*TEPGTL
Trigger: AAGTGTTCCAGGCTCTGTGCAAGGACAACATCTACA...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAATGTAGATGTTGTCCTTaGACAGAGCCTGGAACACTT +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQCRCCP*TEPGTL
Trigger: AAGTGTTCCAGGCTCTGTGCAAGGACAACATCTACA...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAGATGACAAACATGACTaGACAGCACAAAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQDDKHD*TAQNSS
Trigger: GGAGCTGTTTTGTGCTGTGCAGTCATGTTTGTCATC...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATGACAAACATGACTaGACAGCACAAAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSDDKHD*TAQNSS
Trigger: GGAGCTGTTTTGTGCTGTGCAGTCATGTTTGTCATC...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAATAGGTGATGACAGCTaGCCACCAGTTGATGACAAA +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSIGDDS*PPVDDK
Trigger: TTTGTCATCAACTGGTGGGCAGCTGTCATCACCTAT...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAATTGAACTCTCCCACATaGATCGACTGGCTTGTGTTA +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQLNSPT*IDWLVL
Trigger: TAACACAAGCCAGTCGATGCATGTGGGAGAGTTCAA...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCATTGAACTCTCCCACATaGATCGACTGGCTTGTGTTA +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSLNSPT*IDWLVL
Trigger: TAACACAAGCCAGTCGATGCATGTGGGAGAGTTCAA...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGACTGCTTCCAGTTCTaGATCTGTAATTTTCCACGG +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSDCFQF*ICNFPR
Trigger: CCGTGGAAAATTACAGATGCAGAACTGGAAGCAGTC...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAGACTGCTTCCAGTTCTaGATCTGTAATTTTCCACGG +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQDCFQF*ICNFPR
Trigger: CCGTGGAAAATTACAGATGCAGAACTGGAAGCAGTC...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCACTCTTTTCCTTGACTaGTTCCAGTTCTGCATCTGT +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFTLFLD*FQFCIC
Trigger: ACAGATGCAGAACTGGAAGCAGTCAAGGAAAAGAGT...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCATTAGCAGCTCTGGAGTaGTCCTGTAAGAGTTCATTC +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSLAALE*SCKSSF
Trigger: GAATGAACTCTTACAGGAGCACTCCAGAGCTGCTAA...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAATTAGCAGCTCTGGAGTaGTCCTGTAAGAGTTCATTC +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQLAALE*SCKSSF
Trigger: GAATGAACTCTTACAGGAGCACTCCAGAGCTGCTAA...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCACATTTATTGAGATCCTaGTGTGGGGCTGAGACCTAT +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSHLLRS*CGAETY
Trigger: ATAGGTCTCAGCCCCACAGCAGGATCTCAATAAATG...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAACACCTGTGGTTACTATaGCAGCCTGTCAATAAGCAT +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQHLWLL*QPVNKH
Trigger: ATGCTTATTGACAGGCTGGCATAGTAACCACAGGTG...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCACACCTGTGGTTACTATaGCAGCCTGTCAATAAGCAT +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSHLWLL*QPVNKH
Trigger: ATGCTTATTGACAGGCTGGCATAGTAACCACAGGTG...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp GTTCATCCCTCAAAACCTGGATTGAGTGTCCCCTCTTCTGAAAGTCTTCCTTTAAGCGATTGGTATTACTaGGCACTGAATCCAGAAATA +
Preference number: 4 (lower is better)
Translates to: VHPSKPGLSVPSSESLPLSDWYY*ALNPEI
Trigger: TATTTCTGGATTCAGTGCCCAGTAATACCAATCGCT...TAAAGGAAGACTTTCAGAAGAGGGGACACTCAATCCAGGTTTTGAGGGATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR CCA 90 bp ACATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGCAAAGGTTTCTTCATAATGTaGTGGGTCAGTATTGTCATC +
Preference number: 4 (lower is better)
Translates to: TSHSFCFKCPSLLCPVGKGFFIM*WVSIVI
Trigger: GATGACAATACTGACCCACCACATTATGAAGAAACC...TTTGCCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR CCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAGATAGTACTCTATCTTaGGAACGGCATCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQDSTLS*ERHPWC
Trigger: ACACCATGGATGCCGTTCCCAAGATAGAGTACTATC...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATAGTACTCTATCTTaGGAACGGCATCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSDSTLS*ERHPWC
Trigger: ACACCATGGATGCCGTTCCCAAGATAGAGTACTATC...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAACCCTTTGTGAAGCGTaGCCCAAAGTTTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSTLCEA*PKVFCK
Trigger: TTTGCAGAAAACTTTGGGCCACGCTTCACAAAGGGT...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAACCCTTTGTGAAGCGTaGCCCAAAGTTTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQTLCEA*PKVFCK
Trigger: TTTGCAGAAAACTTTGGGCCACGCTTCACAAAGGGT...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAGCCCCAGTTCACATCTaGCTTCTTACAAGTCACATA +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQAPVHI*LLTSHI
Trigger: TATGTGACTTGTAAGAAGCCAGATGTGAACTGGGGC...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAACGTGGTCTTCCACTGTaGTTAATTCCAGAGCATTGT +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQRGLPL*LIPEHC
Trigger: ACAATGCTCTGGAATTAACCACAGTGGAAGACCACG...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCACGTGGTCTTCCACTGTaGTTAATTCCAGAGCATTGT +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSRGLPL*LIPEHC
Trigger: ACAATGCTCTGGAATTAACCACAGTGGAAGACCACG...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCACCAGCTCTCTTTGTTTaGCCTAATGTTGATGTCACC +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSPALFV*PNVDVT
Trigger: GGTGACATCAACATTAGGCCAAACAAAGAGAGCTGG...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAACAACAAATCCGATATaGATCCCTTTCTTGCCACGG +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQTTNPI*IPFLPR
Trigger: CCGTGGCAAGAAAGGGATCCATATCGGATTTGTTGT...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCATTTGATAACCACCTGTaGTTACTATGCCAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSFDNHL*LLCQPV
Trigger: GACAGGCTGGCATAGTAACCACAGGTGGTTATCAAA...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAATGGTTAGCGCTTTCCTaGCCTAGAAGTGTAAATGTC +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQWLALS*PRSVNV
Trigger: GACATTTACACTTCTAGGCCAGGAAAGCGCTAACCA...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646012.1
ENST00000647546.1
CDS-3UTR TCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGGTATTACTGGGCACTaGATCCAGAAATACATTGGA +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSGITGH*IQKYIG
Trigger: TCCAATGTATTTCTGGATTCAGTGCCCAGTAATACC...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp TCTTACATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGTTCACAACACCAGCTTaGTCATCTTCCTTATTTTCA +
Preference number: 4 (lower is better)
Translates to: SYIPFLLFQMSVSSLSCRFTTPA*SSSLFS
Trigger: TGAAAATAAGGAAGATGATCAAGCTGGTGTTGTGAA...CCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGATGTAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR TCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCAAATGCATCATGTATaGTTCCCACGTAGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFQMHHV*FPRSSQ
Trigger: TTGAGAACTACGTGGGAATCATACATGATGCATTTG...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCTGTTTCTTTTTAAATTaGGTGCTGGCTTCCACCAGT +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFCFFLN*VLASTS
Trigger: ACTGGTGGAAGCCAGCACTCAATTTAAAAAGAAACA...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCATAGCAACAGCCACTaGATTAGCAAAAGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFHSNSH*ISKSKD
Trigger: ATCTTTGCTTTTGCTAATGCAGTGGCTGTTGCTATG...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAACTCTTTTCCTTGACTaGTTCCAGTTCTGCATCTGT +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQTLFLD*FQFCIC
Trigger: ACAGATGCAGAACTGGAAGCAGTCAAGGAAAAGAGT...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAACTCTTTTCCTTGACTaGTTCCAGTTCTGCATCTGT +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSTLFLD*FQFCIC
Trigger: ACAGATGCAGAACTGGAAGCAGTCAAGGAAAAGAGT...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCTCCTCTCCAGAGGTTTaGATATCCATAGATCAGATT +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFSSPEV*ISIDQI
Trigger: AATCTGATCTATGGATATGCAAACCTCTGGAGAGGA...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAGCTGCACTGCTCTCATaGTTCTCATTTATGACACTA +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQAALLS*FSFMTL
Trigger: TAGTGTCATAAATGAGAACCATGAGAGCAGTGCAGC...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGCTGCACTGCTCTCATaGTTCTCATTTATGACACTA +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSAALLS*FSFMTL
Trigger: TAGTGTCATAAATGAGAACCATGAGAGCAGTGCAGC...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCGGTTTCTTCATAATGTaGTGGGTCAGTATTGTCATC +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFGFFIM*WVSIVI
Trigger: GATGACAATACTGACCCACCACATTATGAAGAAACC...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCGAGATGTCAAATCCTTaGCTGATTCTGACTATAACC +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFEMSNP*LILTIT
Trigger: GGTTATAGTCAGAATCAGCCAAGGATTTGACATCTC...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAATGTTCCCCAGCCTATTaGTCTTTTCCTTTGATAACC +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQCSPAY*SFPLIT
Trigger: GGTTATCAAAGGAAAAGACCAATAGGCTGGGGAACA...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAAGTAGACTTAAGTGTTaGCACGTTTGTCTGTGTTCG +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSSRLKC*HVCLCS
Trigger: CGAACACAGACAAACGTGCCAACACTTAAGTCTACT...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAAGTAGACTTAAGTGTTaGCACGTTTGTCTGTGTTCG +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQSRLKC*HVCLCS
Trigger: CGAACACAGACAAACGTGCCAACACTTAAGTCTACT...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCTTCACAACACCAGCTTaGTCATCTTCCTTATTTTCA +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFFTTPA*SSSLFS
Trigger: TGAAAATAAGGAAGATGATCAAGCTGGTGTTGTGAA...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCATTAATAAGTGCATATaGGGCCAGGAAAAAGTTGGA +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFINKCI*GQEKVG
Trigger: TCCAACTTTTTCCTGGCCTCATATGCACTTATTAAT...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCATGTTTCTTTTTAAATTaGGTGCTGGCTTCCACCAGT +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSCFFLN*VLASTS
Trigger: ACTGGTGGAAGCCAGCACTCAATTTAAAAAGAAACA...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGAGCATAAGCCAACATaGGTTTCCTTGATTTTCTTG +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSEHKPT*VSLIFL
Trigger: CAAGAAAATCAAGGAAACTCATGTTGGCTTATGCTC...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAGAGCATAAGCCAACATaGGTTTCCTTGATTTTCTTG +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQEHKPT*VSLIFL
Trigger: CAAGAAAATCAAGGAAACTCATGTTGGCTTATGCTC...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCACATAGCAACAGCCACTaGATTAGCAAAAGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSHSNSH*ISKSKD
Trigger: ATCTTTGCTTTTGCTAATGCAGTGGCTGTTGCTATG...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAACATAGCAACAGCCACTaGATTAGCAAAAGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQHSNSH*ISKSKD
Trigger: ATCTTTGCTTTTGCTAATGCAGTGGCTGTTGCTATG...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCAGTTGTTAAATCTTTaGAGCTTTCATGGAGACGAT +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFQLLNL*SFHGDD
Trigger: ATCGTCTCCATGAAAGCTGCAAAGATTTAACAACTG...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAATCCTCTCCAGAGGTTTaGATATCCATAGATCAGATT +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQSSPEV*ISIDQI
Trigger: AATCTGATCTATGGATATGCAAACCTCTGGAGAGGA...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCATCCTCTCCAGAGGTTTaGATATCCATAGATCAGATT +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSSSPEV*ISIDQI
Trigger: AATCTGATCTATGGATATGCAAACCTCTGGAGAGGA...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp TCTTACATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGAATCCAGAAATACATTaGAAGAGTTGTTCAGTGACA +
Preference number: 4 (lower is better)
Translates to: SYIPFLLFQMSVSSLSCRNPEIH*KSCSVT
Trigger: TGTCACTGAACAACTCTTCCAATGTATTTCTGGATT...CCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGATGTAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR CCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAAGCGATTGGTATTACTaGGCACTGAATCCAGAAATA +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSSDWYY*ALNPEI
Trigger: TATTTCTGGATTCAGTGCCCAGTAATACCAATCGCT...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAGGTTTCTTCATAATGTaGTGGGTCAGTATTGTCATC +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQGFFIM*WVSIVI
Trigger: GATGACAATACTGACCCACCACATTATGAAGAAACC...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGAGATGTCAAATCCTTaGCTGATTCTGACTATAACC +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSEMSNP*LILTIT
Trigger: GGTTATAGTCAGAATCAGCCAAGGATTTGACATCTC...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCATCTTTGCAGCTTTCATaGAGACGATATGGTTCAATC +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSSLQLS*RRYGSI
Trigger: GATTGAACCATATCGTCTCCATGAAAGCTGCAAAGA...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAATCTTTGCAGCTTTCATaGAGACGATATGGTTCAATC +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQSLQLS*RRYGSI
Trigger: GATTGAACCATATCGTCTCCATGAAAGCTGCAAAGA...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCTTTTTAAATCTGCTTTaGAGGTATAAGCCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFFLNLL*RYKPLR
Trigger: CCTCAGAGGCTTATACCTCCAAAGCAGATTTAAAAA...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCATTCACAACACCAGCTTaGTCATCTTCCTTATTTTCA +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSFTTPA*SSSLFS
Trigger: TGAAAATAAGGAAGATGATCAAGCTGGTGTTGTGAA...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAATTAATAAGTGCATATaGGGCCAGGAAAAAGTTGGA +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQINKCI*GQEKVG
Trigger: TCCAACTTTTTCCTGGCCTCATATGCACTTATTAAT...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR TCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAATTAATAAGTGCATATaGGGCCAGGAAAAAGTTGGA +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSINKCI*GQEKVG
Trigger: TCCAACTTTTTCCTGGCCTCATATGCACTTATTAAT...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCACAGTTGTTAAATCTTTaGAGCTTTCATGGAGACGAT +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSQLLNL*SFHGDD
Trigger: ATCGTCTCCATGAAAGCTGCAAAGATTTAACAACTG...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR GCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAACAGTTGTTAAATCTTTaGAGCTTTCATGGAGACGAT +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQQLLNL*SFHGDD
Trigger: ATCGTCTCCATGAAAGCTGCAAAGATTTAACAACTG...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCATGTCACCGATGATATaGATGTCTGCAAATTTTATC +
Preference number: 4 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFMSPMI*MSANFI
Trigger: GATAAAATTTGCAGACATCCATATCATCGGTGACAT...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAATTTTTAAATCTGCTTTaGAGGTATAAGCCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQFLNLL*RYKPLR
Trigger: CCTCAGAGGCTTATACCTCCAAAGCAGATTTAAAAA...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCATTTTTAAATCTGCTTTaGAGGTATAAGCCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSFLNLL*RYKPLR
Trigger: CCTCAGAGGCTTATACCTCCAAAGCAGATTTAAAAA...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAAATCCAGAAATACATTaGAAGAGTTGTTCAGTGACA +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSNPEIH*KSCSVT
Trigger: TGTCACTGAACAACTCTTCCAATGTATTTCTGGATT...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAATGTCACCGATGATATaGATGTCTGCAAATTTTATC +
Preference number: 4 (lower is better)
Translates to: MYVESGRILSRGLHIHRSMSPMI*MSANFI
Trigger: GATAAAATTTGCAGACATCCATATCATCGGTGACAT...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CCA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAATTCATGGAGACGATATaGTTCAATCATCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQFMETI*FNHLFK
Trigger: TTTGAAGAGATGATTGAACCATATCGTCTCCATGAA...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS CCA 90 bp AAGACTCCACTGGTGCCAAGCGACAGGCGGGCTGGTGGGCAGACATaGCACCACCACCGGGGGCTTTCAGGACTGGTCCAGCCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: KTPLVPSDRRAGGQT*HHHRGLSGLVQPSQ
Trigger: CTGGGAGGGCTGGACCAGTCCTGAAAGCCCCCGGTGGTGGTGCCATGTCTGCCCACCAGCCCGCCTGTCGCTTGGCACCAGTGGAGTCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647232.1
CDS CCA 90 bp CGCTTTGCAAGCGAAGACTCCACTGGTGCCAAGCGACAGGCGGGCTaGTGGGCAGACATGGCACCACCACCGGGGGCTTTCAGGACTGGT +
Preference number: 5 (lower is better)
Translates to: RFASEDSTGAKRQAG*WADMAPPPGAFRTG
Trigger: ACCAGTCCTGAAAGCCCCCGGTGGTGGTGCCATGTCTGCCCACCAGCCCGCCTGTCGCTTGGCACCAGTGGAGTCTTCGCTTGCAAAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647232.1
CDS CCA 90 bp TTTGCAAGCGAAGACTCCACTGGTGCCAAGCGACAGGCGGGCTGGTaGGCAGACATGGCACCACCACCGGGGGCTTTCAGGACTGGTCCA +
Preference number: 5 (lower is better)
Translates to: FASEDSTGAKRQAGW*ADMAPPPGAFRTGP
Trigger: TGGACCAGTCCTGAAAGCCCCCGGTGGTGGTGCCATGTCTGCCCACCAGCCCGCCTGTCGCTTGGCACCAGTGGAGTCTTCGCTTGCAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647232.1
CDS TCA 90 bp AGGCCGACCCAGAATTCAGGGAGAGGGCTGTGGAGTCACAGCCACTaGACTCACCCTGGCTCCATCCAGAATGCTCTGGTCTGGGCTGTT +
Preference number: 5 (lower is better)
Translates to: RPTQNSGRGLWSHSH*THPGSIQNALVWAV
Trigger: AACAGCCCAGACCAGAGCATTCTGGATGGAGCCAGGGTGAGTTCAGTGGCTGTGACTCCACAGCCCTCTCCCTGAATTCTGGGTCGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558252.5
CDS CCA 90 bp CTGTTGGTCATTGGGAGCACAGCGTTTGGGGTGAGCCCCGAGGCCTaGGTGCAGGAGTGGTTTACTGAGTGGCAATCATCAGCAATGCCA +
Preference number: 5 (lower is better)
Translates to: LLVIGSTAFGVSPEA*VQEWFTEWQSSAMP
Trigger: TGGCATTGCTGATGATTGCCACTCAGTAAACCACTCCTGCACCCAGGCCTCGGGGCTCACCCCAAACGCTGTGCTCCCAATGACCAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560692.5
CDS TCA 90 bp CTCGTTCCAAGTATGGTTAGAAGGGTAGTCAGCCACGAGAGGCTGTaGTCTCTCTGGCCATGCTCAAGGAGAAGGGAAAGTGGAAGGAGG +
Preference number: 5 (lower is better)
Translates to: LVPSMVRRVVSHERL*SLWPCSRRRESGRR
Trigger: CCTCCTTCCACTTTCCCTTCTCCTTGAGCATGGCCAGAGAGATCACAGCCTCTCGTGGCTGACTACCCTTCTAACCATACTTGGAACGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558252.5
CDS TCA 90 bp TTGTTCATCTCCAGGTATCCCATCACCGTTAGCAACTCTGTCAGCTaGACTTGGGGTGACTGCCACATTCTGCGTGTGGTGGCATGCACC +
Preference number: 5 (lower is better)
Translates to: LFISRYPITVSNSVS*TWGDCHILRVVACT
Trigger: GGTGCATGCCACCACACGCAGAATGTGGCAGTCACCCCAAGTTCAGCTGACAGAGTTGCTAACGGTGATGGGATACCTGGAGATGAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646012.1
CDS CCA 90 bp CTGTGTTCGCTGATCGGTTCAGTAACAAATGTAGAAGGCGTGTTCTaGAACCTGCGTAGAGTCACAGGGCCCTGGTTAGCGCTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: LCSLIGSVTNVEGVF*NLRRVTGPWLALSW
Trigger: CCAGGAAAGCGCTAACCAGGGCCCTGTGACTCTACGCAGGTTCCAGAACACGCCTTCTACATTTGTTACTGAACCGATCAGCGAACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000561127.5
ENST00000646012.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ACATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGCAAACTGGGTCGGTTGACCTaGGGCCCACTGATGCTGCCG +
Preference number: 5 (lower is better)
Translates to: TSHSFCFKCPSLLCPVGKLGRLT*GPLMLP
Trigger: CGGCAGCATCAGTGGGCCCAAGGTCAACCGACCCAG...TTTGCCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR CAA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCCAAAGATCAGGCCTATaGACCCACCGAACTCGGGCC +
Preference number: 5 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVQRSGL*THRTRA
Trigger: GGCCCGAGTTCGGTGGGTCAATAGGCCTGATCTTTG...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCTGGGTCGGTTGACCTaGGGCCCACTGATGCTGCCG +
Preference number: 5 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFLGRLT*GPLMLP
Trigger: CGGCAGCATCAGTGGGCCCAAGGTCAACCGACCCAG...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS CCA 90 bp AATGTAGAAGGCGTGTTCTGGAACCTGCGTAGAGTCACAGGGCCCTaGTTAGCGCTTTCCTGGCCTAGAAGTGTAAATGTCTGTGTCTGT +
Preference number: 5 (lower is better)
Translates to: NVEGVFWNLRRVTGP*LALSWPRSVNVCVC
Trigger: ACAGACACAGACATTTACACTTCTAGGCCAGGAAAGCGCTAACCAGGGCCCTGTGACTCTACGCAGGTTCCAGAACACGCCTTCTACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561127.5
ENST00000646012.1
CDS-3UTR CAA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCTGTGGTGGGTCAGTATaGTCATCTGCAGCTGCACTG +
Preference number: 5 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVCGGSV*SSAAAL
Trigger: CAGTGCAGCTGCAGATGACAATACTGACCCACCACA...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAACTGGGTCGGTTGACCTaGGGCCCACTGATGCTGCCG +
Preference number: 5 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQLGRLT*GPLMLP
Trigger: CGGCAGCATCAGTGGGCCCAAGGTCAACCGACCCAG...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCACTGGGTCGGTTGACCTaGGGCCCACTGATGCTGCCG +
Preference number: 5 (lower is better)
Translates to: MYVESGRILSRGLHIHRSLGRLT*GPLMLP
Trigger: CGGCAGCATCAGTGGGCCCAAGGTCAACCGACCCAG...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp TCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGCAAACTCCTGTTCCAAAGATCAGGCCTATaGACCCACCGAACTCGGGCC +
Preference number: 5 (lower is better)
Translates to: SFCFKCPSLLCPVGKLLFQRSGL*THRTRA
Trigger: GGCCCGAGTTCGGTGGGTCAATAGGCCTGATCTTTG...GAACAGGAGTTTGCCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR CAA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCGACCAGAAGAATGACTaGGGCCTTTGCCTCCCATTC +
Preference number: 5 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVDQKND*GLCLPF
Trigger: GAATGGGAGGCAAAGGCCCAAGTCATTCTTCTGGTC...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS TCA 90 bp TTGTTCATCTCCAGGTATCCCATCACCGTTAGCAACTCTGTCAGCTaGACTTGGGGTGACTGCCACATTCTTCCATGCTTGTTGCCATGG +
Preference number: 5 (lower is better)
Translates to: LFISRYPITVSNSVS*TWGDCHILPCLLPW
Trigger: CCATGGCAACAAGCATGGAAGAATGTGGCAGTCACCCCAAGTTCAGCTGACAGAGTTGCTAACGGTGATGGGATACCTGGAGATGAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559641.5
ENST00000561127.5
CDS CCA 90 bp CCCTTTGCTTTTGGGAACAAGACAGCCAAAACTCGTAGCCCAGAATaGTTACCCAAGGGCTGTAGCTACTGTTACTCCTGGCTCCAGATT +
Preference number: 5 (lower is better)
Translates to: PFAFGNKTAKTRSPE*LPKGCSYCYSWLQI
Trigger: AATCTGGAGCCAGGAGTAACAGTAGCTACAGCCCTTGGGTAACCATTCTGGGCTACGAGTTTTGGCTGTCTTGTTCCCAAAAGCAAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558252.5
CDS-3UTR CAA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCACAGCTGCCCACCAGTaGATGACAAACATGACTGCA +
Preference number: 5 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVTAAHQ*MTNMTA
Trigger: TGCAGTCATGTTTGTCATCAACTGGTGGGCAGCTGT...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCTCCTTAACACACAGTTaGCGCGGTCCCACAAAGACT +
Preference number: 5 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVSLTHS*RGPTKT
Trigger: AGTCTTTGTGGGACCGCGCAAACTGTGTGTTAAGGA...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCTCCACCAGTTTCTGGTaGAACTCTCCCACATGCATC +
Preference number: 5 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVSTSFW*NSPTCI
Trigger: GATGCATGTGGGAGAGTTCAACCAGAAACTGGTGGA...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS TCA 90 bp TTGTTCATCTCCAGGTATCCCATCACCGTTAGCAACTCTGTCAGCTaGACTTGGGGTGACTGCCACATTCTTTGCGAGTTGCTCGTGAAT +
Preference number: 5 (lower is better)
Translates to: LFISRYPITVSNSVS*TWGDCHILCELLVN
Trigger: ATTCACGAGCAACTCGCAAAGAATGTGGCAGTCACCCCAAGTTCAGCTGACAGAGTTGCTAACGGTGATGGGATACCTGGAGATGAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330289.10
ENST00000380993.8
ENST00000396577.7
ENST00000561031.1
ENST00000647232.1
ENST00000647546.1
CDS TCA 90 bp ACTTGGGGTGACTGCCACATTCTTCCATGCTTGTTGCCATGGAGATaGAGTCCAGCCAGTAGACTTAAGTGTTGGCACGTTTGTCTGTGT +
Preference number: 5 (lower is better)
Translates to: TWGDCHILPCLLPWR*SPASRLKCWHVCLC
Trigger: ACACAGACAAACGTGCCAACACTTAAGTCTACTGGCTGGACTTCATCTCCATGGCAACAAGCATGGAAGAATGTGGCAGTCACCCCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559641.5
ENST00000561127.5
CDS TCA 90 bp AGAATGCTCTGGTCTGGGCTGTTTGGTAAGCTCCCCTATGTAAAGTaGATGCTCCATAGTTGTTGGCAGGCTCTCTCGTTCCAAGTATGG +
Preference number: 5 (lower is better)
Translates to: RMLWSGLFGKLPYVK*MLHSCWQALSFQVW
Trigger: CCATACTTGGAACGAGAGAGCCTGCCAACAACTATGGAGCATTCACTTTACATAGGGGAGCTTACCAAACAGCCCAGACCAGAGCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558252.5
CDS TCA 90 bp TCCCAGGACTGCAAAGCAGAGCAAACAACGTACCTCCAAATCTCCTaGGATATTGGCACCAGCAAGAATCCCAGTAGCTGCTGGGAAAAA +
Preference number: 5 (lower is better)
Translates to: SQDCKAEQTTYLQIS*DIGTSKNPSSCWEK
Trigger: TTTTTCCCAGCAGCTACTGGGATTCTTGCTGGTGCCAATATCTCAGGAGATTTGGAGGTACGTTGTTTGCTCTGCTTTGCAGTCCTGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558805.1
CDS GCA 90 bp GAGAGGGAGAAAGTGGTAGAGGCCAGAATTCAACGAAGCCGTGACTaGTTTCAGCTTCAAGAAACACATAGCCAGGAGTCTACAAAAGGG +
Preference number: 5 (lower is better)
Translates to: EREKVVEARIQRSRD*FQLQETHSQESTKG
Trigger: CCCTTTTGTAGACTCCTGGCTATGTGTTTCTTGAAGCTGAAAGCAGTCACGGCTTCGTTGAATTCTGGCCTCTACCACTTTCTCCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558252.5
ENST00000560692.5
CDS CCA 90 bp ACCAGAGTAGACCTGGACTATTCTCATCGTACCTTAGGTTTTCTTTaGCATCCAGCTCCTCCAAATAGCCAGGCTTCAAGAACATCGGGC +
Preference number: 5 (lower is better)
Translates to: TRVDLDYSHRTLGFL*HPAPPNSQASRTSG
Trigger: GCCCGATGTTCTTGAAGCCTGGCTATTTGGAGGAGCTGGATGCCAAAGAAAACCTAAGGTACGATGAGAATAGTCCAGGTCTACTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558252.5
ENST00000560692.5
CDS-3UTR CAA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCACGGCATCCATGGTGTaGTGGCCAAAAGTTTGTAGA +
Preference number: 5 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVTASMV*WPKVCR
Trigger: TCTACAAACTTTTGGCCACAACACCATGGATGCCGT...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCCACATTCTTTGCGAGTaGCTCGTGAATCTCAAGCAG +
Preference number: 5 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVHILCE*LVNLKQ
Trigger: CTGCTTGAGATTCACGAGCAACTCGCAAAGAATGTG...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCAAAGATCAGGCCTATaGACCCACCGAACTCGGGCC +
Preference number: 5 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFQRSGL*THRTRA
Trigger: GGCCCGAGTTCGGTGGGTCAATAGGCCTGATCTTTG...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCTCCGGATGTCATTGGTaGGATCCACCATCATCGAAT +
Preference number: 5 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVSGCHW*DPPSSN
Trigger: ATTCGATGATGGTGGATCCAACCAATGACATCCGGA...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCCATGCTGCTGAACCATaGCAGTTCATCCCAGAAATG +
Preference number: 5 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVHAAEP*QFIPEM
Trigger: CATTTCTGGGATGAACTGCAATGGTTCAGCAGCATG...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCGTTCATGTCGACATCTaGAGAAGTCATAGCCCAACC +
Preference number: 5 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVVHVDI*RSHSPT
Trigger: GGTTGGGCTATGACTTCTCAAGATGTCGACATGAAC...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCGGGCGGAGGAGAGTGTaGCAGAAAAGATTCCCGCAG +
Preference number: 5 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFGRRRV*QKRFPQ
Trigger: CTGCGGGAATCTTTTCTGCAACACTCTCCTCCGCCC...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCAGAGCCTGGAACACTTaGGGTGCGCTGACAAGGGAG +
Preference number: 5 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFRAWNT*GALTRE
Trigger: CTCCCTTGTCAGCGCACCCAAAGTGTTCCAGGCTCT...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCAGGAGAGCAGGTCTaGTCATGGGTCCCCCTGTTA +
Preference number: 5 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFPGEQV*SWVPLL
Trigger: TAACAGGGGGACCCATGACAAGACCTGCTCTCCTGG...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCACAAAGATCAGGCCTATaGACCCACCGAACTCGGGCC +
Preference number: 5 (lower is better)
Translates to: MYVESGRILSRGLHIHRSQRSGL*THRTRA
Trigger: GGCCCGAGTTCGGTGGGTCAATAGGCCTGATCTTTG...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCATAATCCGGATGTCATaGGTTGGATCCACCATCATC +
Preference number: 5 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVIIRMS*VGSTII
Trigger: GATGATGGTGGATCCAACCAATGACATCCGGATTAT...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ACATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGCAAAGACCAGAAGAATGACTaGGGCCTTTGCCTCCCATTC +
Preference number: 5 (lower is better)
Translates to: TSHSFCFKCPSLLCPVGKDQKND*GLCLPF
Trigger: GAATGGGAGGCAAAGGCCCAAGTCATTCTTCTGGTC...TTTGCCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR CAA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAGGGCGGAGGAGAGTGTaGCAGAAAAGATTCCCGCAG +
Preference number: 5 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQGRRRV*QKRFPQ
Trigger: CTGCGGGAATCTTTTCTGCAACACTCTCCTCCGCCC...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGGGCGGAGGAGAGTGTaGCAGAAAAGATTCCCGCAG +
Preference number: 5 (lower is better)
Translates to: MYVESGRILSRGLHIHRSGRRRV*QKRFPQ
Trigger: CTGCGGGAATCTTTTCTGCAACACTCTCCTCCGCCC...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAAGAGCCTGGAACACTTaGGGTGCGCTGACAAGGGAG +
Preference number: 5 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQRAWNT*GALTRE
Trigger: CTCCCTTGTCAGCGCACCCAAAGTGTTCCAGGCTCT...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCCCTCTCAGGGGTTCATaGTTTTTCCCATATCCCTTT +
Preference number: 5 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVPLRGS*FFPYPF
Trigger: AAAGGGATATGGGAAAAACAATGAACCCCTGAGAGG...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAACCAGGAGAGCAGGTCTaGTCATGGGTCCCCCTGTTA +
Preference number: 5 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQPGEQV*SWVPLL
Trigger: TAACAGGGGGACCCATGACAAGACCTGCTCTCCTGG...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCACCAGGAGAGCAGGTCTaGTCATGGGTCCCCCTGTTA +
Preference number: 5 (lower is better)
Translates to: MYVESGRILSRGLHIHRSPGEQV*SWVPLL
Trigger: TAACAGGGGGACCCATGACAAGACCTGCTCTCCTGG...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCGTCAATAAGCATTTATaGAGATCCTGCTGTGGGGCT +
Preference number: 5 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVVNKHL*RSCCGA
Trigger: AGCCCCACAGCAGGATCTCAATAAATGCTTATTGAC...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS CCA 90 bp CTATTGCAGGGATACTGTGGTGAGCAGTGCCTCTGTATCACTATGTaGCTTCAGGTCCTTGTGCCACTAAAGGTGATTTATTCTGCACTT +
Preference number: 5 (lower is better)
Translates to: LLQGYCGEQCLCITM*LQVLVPLKVIYSAL
Trigger: AAGTGCAGAATAAATCACCTTTAGTGGCACAAGGACCTGAAGCCACATAGTGATACAGAGGCACTGCTCACCACAGTATCCCTGCAATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558252.5
CDS CCA 90 bp GGGCTCCAACGGGGTTTCTTTGTGCTAAGGAGAAACTGGTTTGCCTaGCATAAAGACCAAGTCAGAGAACTGCTCATTATGATGAAGGAT +
Preference number: 5 (lower is better)
Translates to: GLQRGFFVLRRNWFA*HKDQVRELLIMMKD
Trigger: ATCCTTCATCATAATGAGCAGTTCTCTGACTTGGTCTTTATGCCAGGCAAACCAGTTTCTCCTTAGCACAAAGAAACCCCGTTGGAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558252.5
ENST00000560692.5
CDS-3UTR CAA 90 bp TTCTTACATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGTGTGGTGGGTCAGTATaGTCATCTGCAGCTGCACTG +
Preference number: 5 (lower is better)
Translates to: FLHPIPSVSNVRLFFVLSCGGSV*SSAAAL
Trigger: CAGTGCAGCTGCAGATGACAATACTGACCCACCACA...CGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGATGTAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR CAA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCTGTGGTGGGTCAGTATaGTCATCTGCAGCTGCACTG +
Preference number: 5 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFCGGSV*SSAAAL
Trigger: CAGTGCAGCTGCAGATGACAATACTGACCCACCACA...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp TCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGCAAACTCCTGTTCACGGCATCCATGGTGTaGTGGCCAAAAGTTTGTAGA +
Preference number: 5 (lower is better)
Translates to: SFCFKCPSLLCPVGKLLFTASMV*WPKVCR
Trigger: TCTACAAACTTTTGGCCACAACACCATGGATGCCGT...GAACAGGAGTTTGCCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR CAA 90 bp TCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGCAAACTCCTGTTCCACATTCTTTGCGAGTaGCTCGTGAATCTCAAGCAG +
Preference number: 5 (lower is better)
Translates to: SFCFKCPSLLCPVGKLLFHILCE*LVNLKQ
Trigger: CTGCTTGAGATTCACGAGCAACTCGCAAAGAATGTG...GAACAGGAGTTTGCCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR CAA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCTTCCTTATTTTCAGCTaGTTCATCTCCAGGTATCCC +
Preference number: 5 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVFLIFS*FISRYP
Trigger: GGGATACCTGGAGATGAACAAGCTGAAAATAAGGAA...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCTTGTTTGGCCTAATGTaGATGTCACCGATGATATGG +
Preference number: 5 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVLFGLM*MSPMIW
Trigger: CCATATCATCGGTGACATCAACATTAGGCCAAACAA...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCACTTTCCAGCTCTCTTaGTTTGGCCTAATGTTGATG +
Preference number: 5 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVTFQLS*FGLMLM
Trigger: CATCAACATTAGGCCAAACAAAGAGAGCTGGAAAGT...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCGCAGTTGTTAAATCTTaGCAGCTTTCATGGAGACGA +
Preference number: 5 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVAVVKS*QLSWRR
Trigger: TCGTCTCCATGAAAGCTGCAAAGATTTAACAACTGC...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCTTCATTCAGTCGAACTaGGCGGTAACTCTTTTCCTT +
Preference number: 5 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVFIQSN*AVTLFL
Trigger: AAGGAAAAGAGTTACCGCCAAGTTCGACTGAATGAA...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCATATGGATCCCTTTCTaGCCACGGGAAGGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFIWIPF*PREGSG
Trigger: TCCTGAGCCTTCCCGTGGCAAGAAAGGGATCCATAT...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCATGTTCCCCAGCCTATaGGTCTTTTCCTTTGATAAC +
Preference number: 5 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVMFPSL*VFSFDN
Trigger: GTTATCAAAGGAAAAGACCAATAGGCTGGGGAACAT...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGCTGAAGTGGGAGGATaGCTTGAGCTAGGGAGGTCA +
Preference number: 5 (lower is better)
Translates to: MYVESGRILSRGLHIHRSAEVGG*LELGRS
Trigger: TGACCTCCCTAGCTCAAGCAATCCTCCCACTTCAGC...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646012.1
CDS TCA 90 bp GACTTGCTTCAGGTCATACCGGCTTTCACACCTAACTTCCTTGCTTaGTGGTTAAATTTATTGGAAACCATCTTGCCCCAGCAAGGTCTC +
Preference number: 5 (lower is better)
Translates to: DLLQVIPAFTPNFLA*WLNLLETILPQQGL
Trigger: GAGACCTTGCTGGGGCAAGATGGTTTCCAATAAATTTAACCATCAAGCAAGGAAGTTAGGTGTGAAAGCCGGTATGACCTGAAGCAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558252.5
CDS TCA 90 bp AATAGTTGGACCAAATTCTTCATATCTATTGCAGGGATACTGTGGTaGGCAGTGCCTCTGTATCACTATGTGGCTTCAGGTCCTTGTGCC +
Preference number: 5 (lower is better)
Translates to: NSWTKFFISIAGILW*AVPLYHYVASGPCA
Trigger: GGCACAAGGACCTGAAGCCACATAGTGATACAGAGGCACTGCTCACCACAGTATCCCTGCAATAGATATGAAGAATTTGGTCCAACTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558252.5
CDS TCA 90 bp TCTTCAGGATGTTCTTCAAAGCTTCCATGCTTGTTGCCATGGAGATaGAGTCCAGCCAGTAGACTTAAGTGTTGGCACGTTTGTCTGTGT +
Preference number: 5 (lower is better)
Translates to: SSGCSSKLPCLLPWR*SPASRLKCWHVCLC
Trigger: ACACAGACAAACGTGCCAACACTTAAGTCTACTGGCTGGACTTCATCTCCATGGCAACAAGCATGGAAGCTTTGAAGAACATCCTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCATGTGGTGGGTCAGTATaGTCATCTGCAGCTGCACTG +
Preference number: 5 (lower is better)
Translates to: MYVESGRILSRGLHIHRSCGGSV*SSAAAL
Trigger: CAGTGCAGCTGCAGATGACAATACTGACCCACCACA...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAATGTGGTGGGTCAGTATaGTCATCTGCAGCTGCACTG +
Preference number: 5 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQCGGSV*SSAAAL
Trigger: CAGTGCAGCTGCAGATGACAATACTGACCCACCACA...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCCTTCACAACACCAGCTaGATCATCTTCCTTATTTTC +
Preference number: 5 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVLHNTS*IIFLIF
Trigger: GAAAATAAGGAAGATGATCAAGCTGGTGTTGTGAAG...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ACATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGCAAATCCGGATGTCATTGGTaGGATCCACCATCATCGAAT +
Preference number: 5 (lower is better)
Translates to: TSHSFCFKCPSLLCPVGKSGCHW*DPPSSN
Trigger: ATTCGATGATGGTGGATCCAACCAATGACATCCGGA...TTTGCCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR CAA 90 bp TCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGCAAACTCCTGTTCATAATCCGGATGTCATaGGTTGGATCCACCATCATC +
Preference number: 5 (lower is better)
Translates to: SFCFKCPSLLCPVGKLLFIIRMS*VGSTII
Trigger: GATGATGGTGGATCCAACCAATGACATCCGGATTAT...GAACAGGAGTTTGCCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR CAA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAGACCAGAAGAATGACTaGGGCCTTTGCCTCCCATTC +
Preference number: 5 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQDQKND*GLCLPF
Trigger: GAATGGGAGGCAAAGGCCCAAGTCATTCTTCTGGTC...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGACCAGAAGAATGACTaGGGCCTTTGCCTCCCATTC +
Preference number: 5 (lower is better)
Translates to: MYVESGRILSRGLHIHRSDQKND*GLCLPF
Trigger: GAATGGGAGGCAAAGGCCCAAGTCATTCTTCTGGTC...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCGACTTTTTCTCATTGTaGGATGGAATGACAGTTCCA +
Preference number: 5 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVDFFSL*DGMTVP
Trigger: TGGAACTGTCATTCCATCCAACAATGAGAAAAAGTC...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp TCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGCAAACTCCTGTTCAAATCTCCTGAGATATaGGCACCAGCAAGAATCCCA +
Preference number: 5 (lower is better)
Translates to: SFCFKCPSLLCPVGKLLFKSPEI*APARIP
Trigger: TGGGATTCTTGCTGGTGCCAATATCTCAGGAGATTT...GAACAGGAGTTTGCCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR CAA 90 bp TCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGCAAACTCCTGTTCTTAGCAGCATCTTTCTaGGTGCCTTCTTACATCCCA +
Preference number: 5 (lower is better)
Translates to: SFCFKCPSLLCPVGKLLFLAASF*VPSYIP
Trigger: TGGGATGTAAGAAGGCACCAAGAAAGATGCTGCTAA...GAACAGGAGTTTGCCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR CAA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCAGGCCCCTACACAAATaGCAACCCCTAAGTAGGCAA +
Preference number: 5 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFRPLHK*QPLSRQ
Trigger: TTGCCTACTTAGGGGTTGCAATTTGTGTAGGGGCCT...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCACAGCTGCCCACCAGTaGATGACAAACATGACTGCA +
Preference number: 5 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFTAAHQ*MTNMTA
Trigger: TGCAGTCATGTTTGTCATCAACTGGTGGGCAGCTGT...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCTCCTTAACACACAGTTaGCGCGGTCCCACAAAGACT +
Preference number: 5 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFSLTHS*RGPTKT
Trigger: AGTCTTTGTGGGACCGCGCAAACTGTGTGTTAAGGA...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAATATGGATCCCTTTCTaGCCACGGGAAGGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: MYVESGRILSRGLHIHRSIWIPF*PREGSG
Trigger: TCCTGAGCCTTCCCGTGGCAAGAAAGGGATCCATAT...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAATATGGATCCCTTTCTaGCCACGGGAAGGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQIWIPF*PREGSG
Trigger: TCCTGAGCCTTCCCGTGGCAAGAAAGGGATCCATAT...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCTATTGGTCTTTTCCTTaGATAACCACCTGTGGTTAC +
Preference number: 5 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVYWSFP*ITTCGY
Trigger: GTAACCACAGGTGGTTATCAAAGGAAAAGACCAATA...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAGAGACCCTTTGCGAGTaGCTCGTGAATCTCAAGCAG +
Preference number: 5 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQETLCE*LVNLKQ
Trigger: CTGCTTGAGATTCACGAGCAACTCGCAAAGGGTCTC...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646012.1
CDS GCA 90 bp CACATAGACGTAAAGGAAGAATTCAATGACATAGGTGATGACAGCTaGCCACCAGTTGATGACAAACATGACTGCACAGCACAAAACAGC +
Preference number: 5 (lower is better)
Translates to: HIDVKEEFNDIGDDS*PPVDDKHDCTAQNS
Trigger: GCTGTTTTGTGCTGTGCAGTCATGTTTGTCATCAACTGGTGGGCAGCTGTCATCACCTATGTCATTGAATTCTTCCTTTACGTCTATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000558252.5
ENST00000559641.5
ENST00000560692.5
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCAATACATTGGAAGAGTaGTTCAGTGACATCTTCCAA +
Preference number: 5 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVNTLEE*FSDIFQ
Trigger: TTGGAAGATGTCACTGAACAACTCTTCCAATGTATT...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCACGGCATCCATGGTGTaGTGGCCAAAAGTTTGTAGA +
Preference number: 5 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFTASMV*WPKVCR
Trigger: TCTACAAACTTTTGGCCACAACACCATGGATGCCGT...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCACATTCTTTGCGAGTaGCTCGTGAATCTCAAGCAG +
Preference number: 5 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFHILCE*LVNLKQ
Trigger: CTGCTTGAGATTCACGAGCAACTCGCAAAGAATGTG...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCTCCGGATGTCATTGGTaGGATCCACCATCATCGAAT +
Preference number: 5 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFSGCHW*DPPSSN
Trigger: ATTCGATGATGGTGGATCCAACCAATGACATCCGGA...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAAGGCCCCTACACAAATaGCAACCCCTAAGTAGGCAA +
Preference number: 5 (lower is better)
Translates to: MYVESGRILSRGLHIHRSRPLHK*QPLSRQ
Trigger: TTGCCTACTTAGGGGTTGCAATTTGTGTAGGGGCCT...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAAGGCCCCTACACAAATaGCAACCCCTAAGTAGGCAA +
Preference number: 5 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQRPLHK*QPLSRQ
Trigger: TTGCCTACTTAGGGGTTGCAATTTGTGTAGGGGCCT...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCATGCTGCTGAACCATaGCAGTTCATCCCAGAAATG +
Preference number: 5 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFHAAEP*QFIPEM
Trigger: CATTTCTGGGATGAACTGCAATGGTTCAGCAGCATG...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAACAGCTGCCCACCAGTaGATGACAAACATGACTGCA +
Preference number: 5 (lower is better)
Translates to: MYVESGRILSRGLHIHRSTAAHQ*MTNMTA
Trigger: TGCAGTCATGTTTGTCATCAACTGGTGGGCAGCTGT...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAACAGCTGCCCACCAGTaGATGACAAACATGACTGCA +
Preference number: 5 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQTAAHQ*MTNMTA
Trigger: TGCAGTCATGTTTGTCATCAACTGGTGGGCAGCTGT...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAATCCTTAACACACAGTTaGCGCGGTCCCACAAAGACT +
Preference number: 5 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQSLTHS*RGPTKT
Trigger: AGTCTTTGTGGGACCGCGCAAACTGTGTGTTAAGGA...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAATCCACCAGTTTCTGGTaGAACTCTCCCACATGCATC +
Preference number: 5 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQSTSFW*NSPTCI
Trigger: GATGCATGTGGGAGAGTTCAACCAGAAACTGGTGGA...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCATCCACCAGTTTCTGGTaGAACTCTCCCACATGCATC +
Preference number: 5 (lower is better)
Translates to: MYVESGRILSRGLHIHRSSTSFW*NSPTCI
Trigger: GATGCATGTGGGAGAGTTCAACCAGAAACTGGTGGA...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp AGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCCCAGCCTATTGGTCACCACCAAACATCAATaGTGCCTTTTTCTTGTTTCT +
Preference number: 5 (lower is better)
Translates to: RYKPLRGPSIIMFPSLLVTTKHQ*CLFLVS
Trigger: AGAAACAAGAAAAAGGCACAATTGATGTTTGGTGGT...GACCAATAGGCTGGGGAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCGGAACCTGGAATGAATaGAACAGTCTGGGTGTTAGG +
Preference number: 5 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFGTWNE*NSLGVR
Trigger: CCTAACACCCAGACTGTTCAATTCATTCCAGGTTCC...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647232.1
CDS TCA 90 bp CCAAAAGTAAACACAATCGAAAGTGCAGACTTGGAAAGGAAAAGTTaGCTTATGCTGGTGTCCTGGGAGAGAAACTATCCTGGCTGTGAA +
Preference number: 5 (lower is better)
Translates to: PKVNTIESADLERKS*LMLVSWERNYPGCE
Trigger: TTCACAGCCAGGATAGTTTCTCTCCCAGGACACCAGCATAAGTCAACTTTTCCTTTCCAAGTCTGCACTTTCGATTGTGTTTACTTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558252.5
ENST00000560692.5
CDS GCA 90 bp AGAGGTTTCTTCATAATGTGGTGGGTCAGTATTGTCATCTGCAGCTaGACTGCTCTCATGGTTCTCATTTATGACACTAACTTGAAAGCG +
Preference number: 5 (lower is better)
Translates to: RGFFIMWWVSIVICS*TALMVLIYDTNLKA
Trigger: CGCTTTCAAGTTAGTGTCATAAATGAGAACCATGAGAGCAGTGCAGCTGCAGATGACAATACTGACCCACCACATTATGAAGAAACCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000330289.10
ENST00000380993.8
ENST00000396577.7
ENST00000561031.1
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS GCA 90 bp CCCAAAAGAGGTTTCTTCATAATGTGGTGGGTCAGTATTGTCATCTaGAGCTGCACTGCTCTCATGGTTCTCATTTATGACACTAACTTG +
Preference number: 5 (lower is better)
Translates to: PKRGFFIMWWVSIVI*SCTALMVLIYDTNL
Trigger: CAAGTTAGTGTCATAAATGAGAACCATGAGAGCAGTGCAGCTGCAGATGACAATACTGACCCACCACATTATGAAGAAACCTCTTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000330289.10
ENST00000380993.8
ENST00000396577.7
ENST00000561031.1
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS CCA 90 bp AAGAATCACCACTGTGATGGAGCCTATAATCCGGATGTCATTGGTTaGATCCACCATCATCGAATCACTCTCCTTAAGAAGATCTACTAC +
Preference number: 5 (lower is better)
Translates to: KNHHCDGAYNPDVIG*IHHHRITLLKKIYY
Trigger: GTAGTAGATCTTCTTAAGGAGAGTGATTCGATGATGGTGGATCCAACCAATGACATCCGGATTATAGGCTCCATCACAGTGGTGATTCTT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000330289.10
ENST00000380993.8
ENST00000396577.7
ENST00000558252.5
ENST00000559641.5
ENST00000559723.2
ENST00000560692.5
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAACGGCATCCATGGTGTaGTGGCCAAAAGTTTGTAGA +
Preference number: 5 (lower is better)
Translates to: MYVESGRILSRGLHIHRSTASMV*WPKVCR
Trigger: TCTACAAACTTTTGGCCACAACACCATGGATGCCGT...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCACACATTCTTTGCGAGTaGCTCGTGAATCTCAAGCAG +
Preference number: 5 (lower is better)
Translates to: MYVESGRILSRGLHIHRSHILCE*LVNLKQ
Trigger: CTGCTTGAGATTCACGAGCAACTCGCAAAGAATGTG...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGCAAACTTTCCTTATTTTCAGCTaGTTCATCTCCAGGTATCCC +
Preference number: 5 (lower is better)
Translates to: IPFLLFQMSVSSLSCRQTFLIFS*FISRYP
Trigger: GGGATACCTGGAGATGAACAAGCTGAAAATAAGGAA...AGTTTGCCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR CAA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAATCCGGATGTCATTGGTaGGATCCACCATCATCGAAT +
Preference number: 5 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQSGCHW*DPPSSN
Trigger: ATTCGATGATGGTGGATCCAACCAATGACATCCGGA...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCATCCGGATGTCATTGGTaGGATCCACCATCATCGAAT +
Preference number: 5 (lower is better)
Translates to: MYVESGRILSRGLHIHRSSGCHW*DPPSSN
Trigger: ATTCGATGATGGTGGATCCAACCAATGACATCCGGA...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp TCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGCAAACTCCTGTTCCTCTTTCCTTTGCACTaGATTCTACTCTTGCTTGTT +
Preference number: 5 (lower is better)
Translates to: SFCFKCPSLLCPVGKLLFLFPLH*ILLLLV
Trigger: AACAAGCAAGAGTAGAATCAAGTGCAAAGGAAAGAG...GAACAGGAGTTTGCCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR CAA 90 bp GTTCATCCCTCAAAACCTGGATTGAGTGTCCCCTCTTCTGAAAGTCTTCCTTTATGCTTCCTCTTTCCTTaGCACTTGATTCTACTCTTG +
Preference number: 5 (lower is better)
Translates to: VHPSKPGLSVPSSESLPLCFLFP*HLILLL
Trigger: CAAGAGTAGAATCAAGTGCAAAGGAAAGAGGAAGCA...TAAAGGAAGACTTTCAGAAGAGGGGACACTCAATCCAGGTTTTGAGGGATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR CAA 90 bp ATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGCAAACTGTCTTCCTTTACTTTTaGAGGGGACAGGCAATTTCT +
Preference number: 5 (lower is better)
Translates to: IPFLLFQMSVSSLSCRQTVFLYF*RGQAIS
Trigger: AGAAATTGCCTGTCCCCTCAAAAAGTAAAGGAAGAC...AGTTTGCCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR CAA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCACATGCTGCTGAACCATaGCAGTTCATCCCAGAAATG +
Preference number: 5 (lower is better)
Translates to: MYVESGRILSRGLHIHRSHAAEP*QFIPEM
Trigger: CATTTCTGGGATGAACTGCAATGGTTCAGCAGCATG...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAGTTCATGTCGACATCTaGAGAAGTCATAGCCCAACC +
Preference number: 5 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQVHVDI*RSHSPT
Trigger: GGTTGGGCTATGACTTCTCAAGATGTCGACATGAAC...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGTTCATGTCGACATCTaGAGAAGTCATAGCCCAACC +
Preference number: 5 (lower is better)
Translates to: MYVESGRILSRGLHIHRSVHVDI*RSHSPT
Trigger: GGTTGGGCTATGACTTCTCAAGATGTCGACATGAAC...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS TCA 90 bp TCTGCAGCTGCACTGCTCTCATGGTTCTCATTTATGACACTAACTTaGAAGCGATTGGTATTACTGGGCACTGAATCCAGAAATACATTG +
Preference number: 5 (lower is better)
Translates to: SAAALLSWFSFMTLT*KRLVLLGTESRNTL
Trigger: CAATGTATTTCTGGATTCAGTGCCCAGTAATACCAATCGCTTTCAAGTTAGTGTCATAAATGAGAACCATGAGAGCAGTGCAGCTGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000330289.10
ENST00000380993.8
ENST00000396577.7
ENST00000561031.1
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGCAAACTGAATCCAGAAATACATaGGAAGAGTTGTTCAGTGAC +
Preference number: 5 (lower is better)
Translates to: IPFLLFQMSVSSLSCRQTESRNT*EELFSD
Trigger: GTCACTGAACAACTCTTCCAATGTATTTCTGGATTC...AGTTTGCCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR CAA 90 bp TTCTTACATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGAGCAGTTTCTCCACTTaGGAGGAAATTGTCATAGCA +
Preference number: 5 (lower is better)
Translates to: FLHPIPSVSNVRLFFVLSSSFST*EEIVIA
Trigger: TGCTATGACAATTTCCTCCAAAGTGGAGAAACTGCT...CGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGATGTAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR CAA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCAGCAGTTTCTCCACTTaGGAGGAAATTGTCATAGCA +
Preference number: 5 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFSSFST*EEIVIA
Trigger: TGCTATGACAATTTCCTCCAAAGTGGAGAAACTGCT...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCTTCCTTATTTTCAGCTaGTTCATCTCCAGGTATCCC +
Preference number: 5 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFFLIFS*FISRYP
Trigger: GGGATACCTGGAGATGAACAAGCTGAAAATAAGGAA...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp TCTTACATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGCTTCACAACACCAGCTaGATCATCTTCCTTATTTTC +
Preference number: 5 (lower is better)
Translates to: SYIPFLLFQMSVSSLSCRLHNTS*IIFLIF
Trigger: GAAAATAAGGAAGATGATCAAGCTGGTGTTGTGAAG...CCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGATGTAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR CAA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAATAATCCGGATGTCATaGGTTGGATCCACCATCATC +
Preference number: 5 (lower is better)
Translates to: MYVESGRILSRGLHIHRSIIRMS*VGSTII
Trigger: GATGATGGTGGATCCAACCAATGACATCCGGATTAT...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGCAAACTGACTTTTTCTCATTGTaGGATGGAATGACAGTTCCA +
Preference number: 5 (lower is better)
Translates to: IPFLLFQMSVSSLSCRQTDFFSL*DGMTVP
Trigger: TGGAACTGTCATTCCATCCAACAATGAGAAAAAGTC...AGTTTGCCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR CAA 90 bp TCTTACATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGCTGGACTTTTTCTCATaGTTGGATGGAATGACAGTT +
Preference number: 5 (lower is better)
Translates to: SYIPFLLFQMSVSSLSCRLDFFS*LDGMTV
Trigger: AACTGTCATTCCATCCAACAATGAGAAAAAGTCCAG...CCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGATGTAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR CAA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAAAATCTCCTGAGATATaGGCACCAGCAAGAATCCCA +
Preference number: 5 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQKSPEI*APARIP
Trigger: TGGGATTCTTGCTGGTGCCAATATCTCAGGAGATTT...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAAAATCTCCTGAGATATaGGCACCAGCAAGAATCCCA +
Preference number: 5 (lower is better)
Translates to: MYVESGRILSRGLHIHRSKSPEI*APARIP
Trigger: TGGGATTCTTGCTGGTGCCAATATCTCAGGAGATTT...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCACCTCTCAGGGGTTCATaGTTTTTCCCATATCCCTTT +
Preference number: 5 (lower is better)
Translates to: MYVESGRILSRGLHIHRSPLRGS*FFPYPF
Trigger: AAAGGGATATGGGAAAAACAATGAACCCCTGAGAGG...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCGCAGTTGTTAAATCTTaGCAGCTTTCATGGAGACGA +
Preference number: 5 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFAVVKS*QLSWRR
Trigger: TCGTCTCCATGAAAGCTGCAAAGATTTAACAACTGC...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCTTCATTCAGTCGAACTaGGCGGTAACTCTTTTCCTT +
Preference number: 5 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFFIQSN*AVTLFL
Trigger: AAGGAAAAGAGTTACCGCCAAGTTCGACTGAATGAA...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAGTCAATAAGCATTTATaGAGATCCTGCTGTGGGGCT +
Preference number: 5 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQVNKHL*RSCCGA
Trigger: AGCCCCACAGCAGGATCTCAATAAATGCTTATTGAC...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGTCAATAAGCATTTATaGAGATCCTGCTGTGGGGCT +
Preference number: 5 (lower is better)
Translates to: MYVESGRILSRGLHIHRSVNKHL*RSCCGA
Trigger: AGCCCCACAGCAGGATCTCAATAAATGCTTATTGAC...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCATGTTCCCCAGCCTATaGGTCTTTTCCTTTGATAAC +
Preference number: 5 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFMFPSL*VFSFDN
Trigger: GTTATCAAAGGAAAAGACCAATAGGCTGGGGAACAT...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS CCA 90 bp GATTATGACTTCCTATACAGAGCTGGCTTTGGAGGTAGGCAGAGTTaGCACAGCAATGACAAACCAACATACCTAAAGACAAAACAAAAT +
Preference number: 5 (lower is better)
Translates to: DYDFLYRAGFGGRQS*HSNDKPTYLKTKQN
Trigger: ATTTTGTTTTGTCTTTAGGTATGTTGGTTTGTCATTGCTGTGCCAACTCTGCCTACCTCCAAAGCCAGCTCTGTATAGGAAGTCATAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560692.5
CDS-3UTR CAA 90 bp ATCCCATTCCTTCTGTTTCAAATGTCCGTCTCTTCTTTGTCCTGTCGGCAAACTAATACATTGGAAGAGTaGTTCAGTGACATCTTCCAA +
Preference number: 5 (lower is better)
Translates to: IPFLLFQMSVSSLSCRQTNTLEE*FSDIFQ
Trigger: TTGGAAGATGTCACTGAACAACTCTTCCAATGTATT...AGTTTGCCGACAGGACAAAGAAGAGACGGACATTTGAAACAGAAGGAATGGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS-3UTR CAA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAAGCAGTTTCTCCACTTaGGAGGAAATTGTCATAGCA +
Preference number: 5 (lower is better)
Translates to: MYVESGRILSRGLHIHRSSSFST*EEIVIA
Trigger: TGCTATGACAATTTCCTCCAAAGTGGAGAAACTGCT...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAAGCAGTTTCTCCACTTaGGAGGAAATTGTCATAGCA +
Preference number: 5 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQSSFST*EEIVIA
Trigger: TGCTATGACAATTTCCTCCAAAGTGGAGAAACTGCT...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAATTCCTTATTTTCAGCTaGTTCATCTCCAGGTATCCC +
Preference number: 5 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQFLIFS*FISRYP
Trigger: GGGATACCTGGAGATGAACAAGCTGAAAATAAGGAA...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCATTCCTTATTTTCAGCTaGTTCATCTCCAGGTATCCC +
Preference number: 5 (lower is better)
Translates to: MYVESGRILSRGLHIHRSFLIFS*FISRYP
Trigger: GGGATACCTGGAGATGAACAAGCTGAAAATAAGGAA...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCTTCACAACACCAGCTaGATCATCTTCCTTATTTTC +
Preference number: 5 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFLHNTS*IIFLIF
Trigger: GAAAATAAGGAAGATGATCAAGCTGGTGTTGTGAAG...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCGACTTTTTCTCATTGTaGGATGGAATGACAGTTCCA +
Preference number: 5 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFDFFSL*DGMTVP
Trigger: TGGAACTGTCATTCCATCCAACAATGAGAAAAAGTC...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCCTGGACTTTTTCTCATaGTTGGATGGAATGACAGTT +
Preference number: 5 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFLDFFS*LDGMTV
Trigger: AACTGTCATTCCATCCAACAATGAGAAAAAGTCCAG...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCAGAGATGTCAAATCCTaGGCTGATTCTGACTATAAC +
Preference number: 5 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFRDVKS*ADSDYN
Trigger: GTTATAGTCAGAATCAGCCAAGGATTTGACATCTCT...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCTCACACTCATTATCTTaGATAGTCGCTTCCAATGCT +
Preference number: 5 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFSHSLS*IVASNA
Trigger: AGCATTGGAAGCGACTATCAAAGATAATGAGTGTGA...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCATTGTTTGGCCTAATGTaGATGTCACCGATGATATGG +
Preference number: 5 (lower is better)
Translates to: MYVESGRILSRGLHIHRSLFGLM*MSPMIW
Trigger: CCATATCATCGGTGACATCAACATTAGGCCAAACAA...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAATTGTTTGGCCTAATGTaGATGTCACCGATGATATGG +
Preference number: 5 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQLFGLM*MSPMIW
Trigger: CCATATCATCGGTGACATCAACATTAGGCCAAACAA...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAACTTTCCAGCTCTCTTaGTTTGGCCTAATGTTGATG +
Preference number: 5 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQTFQLS*FGLMLM
Trigger: CATCAACATTAGGCCAAACAAAGAGAGCTGGAAAGT...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAACTTTCCAGCTCTCTTaGTTTGGCCTAATGTTGATG +
Preference number: 5 (lower is better)
Translates to: MYVESGRILSRGLHIHRSTFQLS*FGLMLM
Trigger: CATCAACATTAGGCCAAACAAAGAGAGCTGGAAAGT...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGCAGTTGTTAAATCTTaGCAGCTTTCATGGAGACGA +
Preference number: 5 (lower is better)
Translates to: MYVESGRILSRGLHIHRSAVVKS*QLSWRR
Trigger: TCGTCTCCATGAAAGCTGCAAAGATTTAACAACTGC...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAGCAGTTGTTAAATCTTaGCAGCTTTCATGGAGACGA +
Preference number: 5 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQAVVKS*QLSWRR
Trigger: TCGTCTCCATGAAAGCTGCAAAGATTTAACAACTGC...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAATTCATTCAGTCGAACTaGGCGGTAACTCTTTTCCTT +
Preference number: 5 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQFIQSN*AVTLFL
Trigger: AAGGAAAAGAGTTACCGCCAAGTTCGACTGAATGAA...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAATCCTCTCCAGAGGTTaGCATATCCATAGATCAGAT +
Preference number: 5 (lower is better)
Translates to: MYVESGRILSRGLHIHRSILSRG*HIHRSD
Trigger: ATCTGATCTATGGATATGCAAACCTCTGGAGAGGAT...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAATCCTCTCCAGAGGTTaGCATATCCATAGATCAGAT +
Preference number: 5 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQILSRG*HIHRSD
Trigger: ATCTGATCTATGGATATGCAAACCTCTGGAGAGGAT...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAATGTTCCCCAGCCTATaGGTCTTTTCCTTTGATAAC +
Preference number: 5 (lower is better)
Translates to: MYVESGRILSRGLHIHRSMFPSL*VFSFDN
Trigger: GTTATCAAAGGAAAAGACCAATAGGCTGGGGAACAT...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp TTAAATCTGCTTTGGAGGTATAAGCCTCTGAGGGGGCCAAGCATAATTATGTTCAATACATTGGAAGAGTaGTTCAGTGACATCTTCCAA +
Preference number: 5 (lower is better)
Translates to: LNLLWRYKPLRGPSIIMFNTLEE*FSDIFQ
Trigger: TTGGAAGATGTCACTGAACAACTCTTCCAATGTATT...GAACATAATTATGCTTGGCCCCCTCAGAGGCTTATACCTCCAAAGCAGATTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCACTTCACAACACCAGCTaGATCATCTTCCTTATTTTC +
Preference number: 5 (lower is better)
Translates to: MYVESGRILSRGLHIHRSLHNTS*IIFLIF
Trigger: GAAAATAAGGAAGATGATCAAGCTGGTGTTGTGAAG...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGACTTTTTCTCATTGTaGGATGGAATGACAGTTCCA +
Preference number: 5 (lower is better)
Translates to: MYVESGRILSRGLHIHRSDFFSL*DGMTVP
Trigger: TGGAACTGTCATTCCATCCAACAATGAGAAAAAGTC...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAGACTTTTTCTCATTGTaGGATGGAATGACAGTTCCA +
Preference number: 5 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQDFFSL*DGMTVP
Trigger: TGGAACTGTCATTCCATCCAACAATGAGAAAAAGTC...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCACTGGACTTTTTCTCATaGTTGGATGGAATGACAGTT +
Preference number: 5 (lower is better)
Translates to: MYVESGRILSRGLHIHRSLDFFS*LDGMTV
Trigger: AACTGTCATTCCATCCAACAATGAGAAAAAGTCCAG...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAACTGGACTTTTTCTCATaGTTGGATGGAATGACAGTT +
Preference number: 5 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQLDFFS*LDGMTV
Trigger: AACTGTCATTCCATCCAACAATGAGAAAAAGTCCAG...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAAGAGATGTCAAATCCTaGGCTGATTCTGACTATAAC +
Preference number: 5 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQRDVKS*ADSDYN
Trigger: GTTATAGTCAGAATCAGCCAAGGATTTGACATCTCT...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAATCACACTCATTATCTTaGATAGTCGCTTCCAATGCT +
Preference number: 5 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQSHSLS*IVASNA
Trigger: AGCATTGGAAGCGACTATCAAAGATAATGAGTGTGA...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAATATTGGTCTTTTCCTTaGATAACCACCTGTGGTTAC +
Preference number: 5 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQYWSFP*ITTCGY
Trigger: GTAACCACAGGTGGTTATCAAAGGAAAAGACCAATA...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCATATTGGTCTTTTCCTTaGATAACCACCTGTGGTTAC +
Preference number: 5 (lower is better)
Translates to: MYVESGRILSRGLHIHRSYWSFP*ITTCGY
Trigger: GTAACCACAGGTGGTTATCAAAGGAAAAGACCAATA...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAAATACATTGGAAGAGTaGTTCAGTGACATCTTCCAA +
Preference number: 5 (lower is better)
Translates to: MYVESGRILSRGLHIHRSNTLEE*FSDIFQ
Trigger: TTGGAAGATGTCACTGAACAACTCTTCCAATGTATT...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp ATGTATGTAGAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAACCACCAAACATCAATaGTGCCTTTTTCTTGTTTCT +
Preference number: 5 (lower is better)
Translates to: MYVESGRILSRGLHIHRSTTKHQ*CLFLVS
Trigger: AGAAACAAGAAAAAGGCACAATTGATGTTTGGTGGT...TGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTCTACATACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAACCACCAAACATCAATaGTGCCTTTTTCTTGTTTCT +
Preference number: 5 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQTTKHQ*CLFLVS
Trigger: AGAAACAAGAAAAAGGCACAATTGATGTTTGGTGGT...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS-3UTR CAA 90 bp GAATCTGGTAGGATCCTCTCCAGAGGTTTGCATATCCATAGATCAGATTTACAAGTTTCCTTGATTTTCTaGTTTATCAACAGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: ESGRILSRGLHIHRSDLQVSLIF*FINSSD
Trigger: GTCACTGCTGTTGATAAACAAGAAAATCAAGGAAAC...TTGTAAATCTGATCTATGGATATGCAAACCTCTGGAGAGGATCCTACCAGATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS TCA 90 bp CATTCCTTTCCTTATATATTTACCTTGGCAGCATTTGCCACCCTATaGATGAAAAGTCCTTTTCCTTTGTCTTATCACCTCTCTACGATT +
Preference number: 5 (lower is better)
Translates to: HSFPYIFTLAAFATL*MKSPFPLSYHLSTI
Trigger: AATCGTAGAGAGGTGATAAGACAAAGGAAAAGGACTTTTCATTCATAGGGTGGCAAATGCTGCCAAGGTAAATATATAAGGAAAGGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558252.5
ENST00000560692.5
CDS TCA 90 bp AGAGAACTTTTAAATCATCAGGAAATCTTGCAGAAACCTACAGTTTaGATCTGTAGGGTAATATGGTCACATCTAACCTCTCTAGCTCCT +
Preference number: 5 (lower is better)
Translates to: RELLNHQEILQKPTV*ICRVIWSHLTSLAP
Trigger: AGGAGCTAGAGAGGTTAGATGTGACCATATTACCCTACAGATTCAAACTGTAGGTTTCTGCAAGATTTCCTGATGATTTAAAAGTTCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558805.1
CDS CCA 90 bp TCTCTTTTTAATTTCTCAGCAGTTGTTAAATCTTTGCAGCTTTCATaGAGACGATATGGTTCAATCATCTCTTCAAAGACTTTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: SLFNFSAVVKSLQLS*RRYGSIISSKTFQL
Trigger: GAGCTGGAAAGTCTTTGAAGAGATGATTGAACCATATCGTCTCCATGAAAGCTGCAAAGATTTAACAACTGCTGAGAAATTAAAAAGAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000558252.5
ENST00000560692.5
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS TCA 72 bp CTGGGTGACAGAGTGAGACCCTTTGCGAGTTGCTCGTaGATCTCAAGCAGGCTGGGTCGGTTGACCTTGGGC +
Preference number: 6 (lower is better)
Translates to: LGDRVRPFASCS*ISSRLGRLTLG
Trigger: GCCCAAGGTCAACCGACCCAGCCTGCTTGAGATTCACGAGCAACTCGCAAAGGGTCTCACTCTGTCACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646012.1
CDS CCA 72 bp AGCCCCGAGGCCTGGGTGCAGGAGTGGTTTACTGAGTaGCAATCATCAGCAATGCCATCTGGGGCATTGGAG +
Preference number: 6 (lower is better)
Translates to: SPEAWVQEWFTE*QSSAMPSGALE
Trigger: CTCCAATGCCCCAGATGGCATTGCTGATGATTGCCACTCAGTAAACCACTCCTGCACCCAGGCCTCGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560692.5
CDS CCA 72 bp ATTGGGAGCACAGCGTTTGGGGTGAGCCCCGAGGCCTaGGTGCAGGAGTGGTTTACTGAGTGGCAATCATCA +
Preference number: 6 (lower is better)
Translates to: IGSTAFGVSPEA*VQEWFTEWQSS
Trigger: TGATGATTGCCACTCAGTAAACCACTCCTGCACCCAGGCCTCGGGGCTCACCCCAAACGCTGTGCTCCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560692.5
CDS TCA 72 bp CTTGGGGTGACTGCCACATTCTTTGCGAGTTGCTCGTaGATCTCAAGCAGGCTGGGTCGGTTGACCTTGGGC +
Preference number: 6 (lower is better)
Translates to: LGVTATFFASCS*ISSRLGRLTLG
Trigger: GCCCAAGGTCAACCGACCCAGCCTGCTTGAGATTCACGAGCAACTCGCAAAGAATGTGGCAGTCACCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330289.10
ENST00000380993.8
ENST00000396577.7
ENST00000561031.1
ENST00000647232.1
ENST00000647546.1
CDS GCA 72 bp TCACAGCCACTGAACTCACCCTGGCTCCATCCAGAATaGTCTGGTCTGGGCTGTTTGGTAAGCTCCCCTATG +
Preference number: 6 (lower is better)
Translates to: SQPLNSPWLHPE*SGLGCLVSSPM
Trigger: CATAGGGGAGCTTACCAAACAGCCCAGACCAGAGCATTCTGGATGGAGCCAGGGTGAGTTCAGTGGCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558252.5
CDS CAA 90 bp GAATTGAACAGTCTGGGTGTTAGGGCTTTGATGTCTAATCCCGCTTaGCAAGCGAAGACTCCACTGGTGCCAAGCGACAGGCGGGCTGGT +
Preference number: 6 (lower is better)
Translates to: ELNSLGVRALMSNPA*QAKTPLVPSDRRAG
Trigger: ACCAGCCCGCCTGTCGCTTGGCACCAGTGGAGTCTTCGCTTGCAAAGCGGGATTAGACATCAAAGCCCTAACACCCAGACTGTTCAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647232.1
CDS TCA 72 bp TCTCCTCCTTCGACTCTGAGCTCCTTGAGGGAGAGGTaGAGCTCCTTGTTTCCTCAGTGCCTCCAAATCTCC +
Preference number: 6 (lower is better)
Translates to: SPPSTLSSLRER*SSLFPQCLQIS
Trigger: GGAGATTTGGAGGCACTGAGGAAACAAGGAGCTTCACCTCTCCCTCAAGGAGCTCAGAGTCGAAGGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS TCA 72 bp CAGCAGATGCAAAGGCCACTGTTCTTGGTAAAGGCGTaGGTTATGTCCAGGAGAGCAGGTCTTGTCATGGGT +
Preference number: 6 (lower is better)
Translates to: QQMQRPLFLVKA*VMSRRAGLVMG
Trigger: ACCCATGACAAGACCTGCTCTCCTGGACATAACTCACGCCTTTACCAAGAACAGTGGCCTTTGCATCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000558252.5
ENST00000559641.5
ENST00000560692.5
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS TCA 72 bp CACATGCTGCTGAACCATTGCAGTTCATCCCAGAAATaGTGGTGTCATTCATGTTCCCGGTGGCATCTCGGA +
Preference number: 6 (lower is better)
Translates to: HMLLNHCSSSQK*WCHSCSRWHLG
Trigger: TCCGAGATGCCACCGGGAACATGAATGACACCATCATTTCTGGGATGAACTGCAATGGTTCAGCAGCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000558252.5
ENST00000559641.5
ENST00000560692.5
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS CCA 72 bp TTTGGGAACAAGACAGCCAAAACTCGTAGCCCAGAATaGTTACCCAAGGGCTGTAGCTACTGTTACTCCTGG +
Preference number: 6 (lower is better)
Translates to: FGNKTAKTRSPE*LPKGCSYCYSW
Trigger: CCAGGAGTAACAGTAGCTACAGCCCTTGGGTAACCATTCTGGGCTACGAGTTTTGGCTGTCTTGTTCCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558252.5
CDS CAA 72 bp CCTTGTTTCCTCAGTGCCTCCAAATCTCCTGAGATATaGGCACCAGCAAGAATCCCAGTAGCTGCTGGGAAA +
Preference number: 6 (lower is better)
Translates to: PCFLSASKSPEI*APARIPVAAGK
Trigger: TTTCCCAGCAGCTACTGGGATTCTTGCTGGTGCCAATATCTCAGGAGATTTGGAGGCACTGAGGAAACAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS CAA 72 bp ATGGCATCTTGGGGATCCTCCAAATCTCCTGAGATATaGGCACCAGCAAGAATCCCAGTAGCTGCTGGGAAA +
Preference number: 6 (lower is better)
Translates to: MASWGSSKSPEI*APARIPVAAGK
Trigger: TTTCCCAGCAGCTACTGGGATTCTTGCTGGTGCCAATATCTCAGGAGATTTGGAGGATCCCCAAGATGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000558252.5
ENST00000559641.5
ENST00000560692.5
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS CAA 72 bp TCATCAGCCCGTACTGACATGGTTCATGTCGACATCTaGAGAAGTCATAGCCCAACCCACATGCTGCTGAAC +
Preference number: 6 (lower is better)
Translates to: SSARTDMVHVDI*RSHSPTHMLLN
Trigger: GTTCAGCAGCATGTGGGTTGGGCTATGACTTCTCAAGATGTCGACATGAACCATGTCAGTACGGGCTGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000558252.5
ENST00000559641.5
ENST00000560692.5
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS CAA 90 bp TGTTCTGGAACCTGGAATGAATTGAACAGTCTGGGTGTTAGGGCTTaGATGTCTAATCCCGCTTTGCAAGCGAAGACTCCACTGGTGCCA +
Preference number: 6 (lower is better)
Translates to: CSGTWNELNSLGVRA*MSNPALQAKTPLVP
Trigger: TGGCACCAGTGGAGTCTTCGCTTGCAAAGCGGGATTAGACATCAAAGCCCTAACACCCAGACTGTTCAATTCATTCCAGGTTCCAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647232.1
CDS TCA 72 bp GACTGCCACATTCTTCCATGCTTGTTGCCATGGAGATaGAGTCCAGCCAGTAGACTTAAGTGTTGGCACGTT +
Preference number: 6 (lower is better)
Translates to: DCHILPCLLPWR*SPASRLKCWHV
Trigger: AACGTGCCAACACTTAAGTCTACTGGCTGGACTTCATCTCCATGGCAACAAGCATGGAAGAATGTGGCAGTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559641.5
ENST00000561127.5
CDS GCA 72 bp CTGGCTTCCACCAGTTTCTGGTTGAACTCTCCCACATaGATCGACTGGCTTGTGTTAATGCTGCCATCTTTT +
Preference number: 6 (lower is better)
Translates to: LASTSFWLNSPT*IDWLVLMLPSF
Trigger: AAAAGATGGCAGCATTAACACAAGCCAGTCGATGCATGTGGGAGAGTTCAACCAGAAACTGGTGGAAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000558252.5
ENST00000560692.5
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS CAA 72 bp CAGAGCAAACAACGTACCTCCAAATCTCCTGAGATATaGGCACCAGCAAGAATCCCAGTAGCTGCTGGGAAA +
Preference number: 6 (lower is better)
Translates to: QSKQRTSKSPEI*APARIPVAAGK
Trigger: TTTCCCAGCAGCTACTGGGATTCTTGCTGGTGCCAATATCTCAGGAGATTTGGAGGTACGTTGTTTGCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558805.1
CDS CAA 90 bp GGAAATTGTTCATCAGCCCGTACTGACATGGTTCATGTCGACATCTaGAGAAGTCATAGCCCAACCCACATGCTGCTGAACCATTGCAGT +
Preference number: 6 (lower is better)
Translates to: GNCSSARTDMVHVDI*RSHSPTHMLLNHCS
Trigger: ACTGCAATGGTTCAGCAGCATGTGGGTTGGGCTATGACTTCTCAAGATGTCGACATGAACCATGTCAGTACGGGCTGATGAACAATTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000558252.5
ENST00000559641.5
ENST00000560692.5
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS CAA 90 bp AATGATGATGACTCCAAGACCTGCAAAATCCCCCAAGAAAGGTGTTaGGTTCCAGTACTGAGAGAAGTCACCAGTACTTCAGGAGGCAGC +
Preference number: 6 (lower is better)
Translates to: NDDDSKTCKIPQERC*VPVLREVTSTSGGS
Trigger: GCTGCCTCCTGAAGTACTGGTGACTTCTCTCAGTACTGGAACCAAACACCTTTCTTGGGGGATTTTGCAGGTCTTGGAGTCATCATCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558252.5
ENST00000560692.5
CDS CAA 90 bp GAAGAACAACTAGACAGCATTAGCAGCTCATTCAGCCCTTTGCTTTaGGGAACAAGACAGCCAAAACTCGTAGCCCAGAATGGTTACCCA +
Preference number: 6 (lower is better)
Translates to: EEQLDSISSSFSPLL*GTRQPKLVAQNGYP
Trigger: TGGGTAACCATTCTGGGCTACGAGTTTTGGCTGTCTTGTTCCCAAAAGCAAAGGGCTGAATGAGCTGCTAATGCTGTCTAGTTGTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558252.5
CDS TCA 72 bp GTGGGAATGAGTCAAGGTATTAAAGGCTGGTTCTTTTaGAGCTCTTGGCCATACCCTGTCTCTAACAGCAGC +
Preference number: 6 (lower is better)
Translates to: VGMSQGIKGWFF*SSWPYPVSNSS
Trigger: GCTGCTGTTAGAGACAGGGTATGGCCAAGAGCTTCAAAAGAACCAGCCTTTAATACCTTGACTCATTCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558252.5
CDS GCA 72 bp CTGAAGAAGACTTCGGACACCATCCCTGAAACAGTCTaGCGCCACTGCAGCATAAAAAGCCTTGATTTTGTT +
Preference number: 6 (lower is better)
Translates to: LKKTSDTIPETV*RHCSIKSLDFV
Trigger: AACAAAATCAAGGCTTTTTATGCTGCAGTGGCGGCAGACTGTTTCAGGGATGGTGTCCGAAGTCTTCTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000558252.5
ENST00000559641.5
ENST00000560692.5
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS GCA 72 bp AGCCATATACAACAAATCCGATATGGATCCCTTTCTTaGCACGGGAAGGCTCAGGACAATGAGATTAGCAGC +
Preference number: 6 (lower is better)
Translates to: SHIQQIRYGSLS*HGKAQDNEISS
Trigger: GCTGCTAATCTCATTGTCCTGAGCCTTCCCGTGGCAAGAAAGGGATCCATATCGGATTTGTTGTATATGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000558252.5
ENST00000560692.5
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS GCA 72 bp TCTTCATATCTATTGCAGGGATACTGTGGTGAGCAGTaGCTCTGTATCACTATGTGGCTTCAGGTCCTTGTG +
Preference number: 6 (lower is better)
Translates to: SSYLLQGYCGEQ*LCITMWLQVLV
Trigger: CACAAGGACCTGAAGCCACATAGTGATACAGAGGCACTGCTCACCACAGTATCCCTGCAATAGATATGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558252.5
CDS GCA 72 bp AAAGTGGTAGAGGCCAGAATTCAACGAAGCCGTGACTaGTTTCAGCTTCAAGAAACACATAGCCAGGAGTCT +
Preference number: 6 (lower is better)
Translates to: KVVEARIQRSRD*FQLQETHSQES
Trigger: AGACTCCTGGCTATGTGTTTCTTGAAGCTGAAAGCAGTCACGGCTTCGTTGAATTCTGGCCTCTACCACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558252.5
ENST00000560692.5
CDS CCA 72 bp CTGAGCTTCATCCCCAAAAGAGGTTTCTTCATAATGTaGTGGGTCAGTATTGTCATCTGCAGCTGCACTGCT +
Preference number: 6 (lower is better)
Translates to: LSFIPKRGFFIM*WVSIVICSCTA
Trigger: AGCAGTGCAGCTGCAGATGACAATACTGACCCACCACATTATGAAGAAACCTCTTTTGGGGATGAAGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000330289.10
ENST00000380993.8
ENST00000396577.7
ENST00000561031.1
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS CCA 72 bp GGATTTCCAACCAAGCCATATACAACAAATCCGATATaGATCCCTTTCTTGCCACGGGAAGGCTCAGGACAA +
Preference number: 6 (lower is better)
Translates to: GFPTKPYTTNPI*IPFLPREGSGQ
Trigger: TTGTCCTGAGCCTTCCCGTGGCAAGAAAGGGATCCATATCGGATTTGTTGTATATGGCTTGGTTGGAAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000558252.5
ENST00000560692.5
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS CCA 72 bp GGATACTGTGGTGAGCAGTGCCTCTGTATCACTATGTaGCTTCAGGTCCTTGTGCCACTAAAGGTGATTTAT +
Preference number: 6 (lower is better)
Translates to: GYCGEQCLCITM*LQVLVPLKVIY
Trigger: ATAAATCACCTTTAGTGGCACAAGGACCTGAAGCCACATAGTGATACAGAGGCACTGCTCACCACAGTATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558252.5
CDS CCA 72 bp GACCTGGACTATTCTCATCGTACCTTAGGTTTTCTTTaGCATCCAGCTCCTCCAAATAGCCAGGCTTCAAGA +
Preference number: 6 (lower is better)
Translates to: DLDYSHRTLGFL*HPAPPNSQASR
Trigger: TCTTGAAGCCTGGCTATTTGGAGGAGCTGGATGCCAAAGAAAACCTAAGGTACGATGAGAATAGTCCAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558252.5
ENST00000560692.5
CDS CAA 72 bp CTAGACAGCATTAGCAGCTCATTCAGCCCTTTGCTTTaGGGAACAAGACAGCCAAAACTCGTAGCCCAGAAT +
Preference number: 6 (lower is better)
Translates to: LDSISSSFSPLL*GTRQPKLVAQN
Trigger: ATTCTGGGCTACGAGTTTTGGCTGTCTTGTTCCCAAAAGCAAAGGGCTGAATGAGCTGCTAATGCTGTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558252.5
CDS CAA 72 bp GAACAACTAGACAGCATTAGCAGCTCATTCAGCCCTTaGCTTTTGGGAACAAGACAGCCAAAACTCGTAGCC +
Preference number: 6 (lower is better)
Translates to: EQLDSISSSFSP*LLGTRQPKLVA
Trigger: GGCTACGAGTTTTGGCTGTCTTGTTCCCAAAAGCAAAGGGCTGAATGAGCTGCTAATGCTGTCTAGTTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558252.5
CDS CAA 72 bp GACTCCAAGACCTGCAAAATCCCCCAAGAAAGGTGTTaGGTTCCAGTACTGAGAGAAGTCACCAGTACTTCA +
Preference number: 6 (lower is better)
Translates to: DSKTCKIPQERC*VPVLREVTSTS
Trigger: TGAAGTACTGGTGACTTCTCTCAGTACTGGAACCAAACACCTTTCTTGGGGGATTTTGCAGGTCTTGGAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558252.5
ENST00000560692.5
CDS CAA 72 bp ACCTGGAATGAATTGAACAGTCTGGGTGTTAGGGCTTaGATGTCTAATCCCGCTTTGCAAGCGAAGACTCCA +
Preference number: 6 (lower is better)
Translates to: TWNELNSLGVRA*MSNPALQAKTP
Trigger: TGGAGTCTTCGCTTGCAAAGCGGGATTAGACATCAAAGCCCTAACACCCAGACTGTTCAATTCATTCCAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647232.1
CDS CAA 90 bp GATAGAGAAGAACAACTAGACAGCATTAGCAGCTCATTCAGCCCTTaGCTTTTGGGAACAAGACAGCCAAAACTCGTAGCCCAGAATGGT +
Preference number: 6 (lower is better)
Translates to: DREEQLDSISSSFSP*LLGTRQPKLVAQNG
Trigger: ACCATTCTGGGCTACGAGTTTTGGCTGTCTTGTTCCCAAAAGCAAAGGGCTGAATGAGCTGCTAATGCTGTCTAGTTGTTCTTCTCTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558252.5
CDS TCA 72 bp TGTTCTTCAAAGCTTCCATGCTTGTTGCCATGGAGATaGAGTCCAGCCAGTAGACTTAAGTGTTGGCACGTT +
Preference number: 6 (lower is better)
Translates to: CSSKLPCLLPWR*SPASRLKCWHV
Trigger: AACGTGCCAACACTTAAGTCTACTGGCTGGACTTCATCTCCATGGCAACAAGCATGGAAGCTTTGAAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS CCA 72 bp CACTGTGATGGAGCCTATAATCCGGATGTCATTGGTTaGATCCACCATCATCGAATCACTCTCCTTAAGAAG +
Preference number: 6 (lower is better)
Translates to: HCDGAYNPDVIG*IHHHRITLLKK
Trigger: CTTCTTAAGGAGAGTGATTCGATGATGGTGGATCCAACCAATGACATCCGGATTATAGGCTCCATCACAGTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000330289.10
ENST00000380993.8
ENST00000396577.7
ENST00000558252.5
ENST00000559641.5
ENST00000559723.2
ENST00000560692.5
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS CCA 72 bp CCAGAAAGTGATGTCTCTGATTACCAGAGACAATTTTaGATGCTTATCAGCCTGACAAAGGCACCACAGGCA +
Preference number: 6 (lower is better)
Translates to: PESDVSDYQRQF*MLISLTKAPQA
Trigger: TGCCTGTGGTGCCTTTGTCAGGCTGATAAGCATCCAAAATTGTCTCTGGTAATCAGAGACATCACTTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558252.5
ENST00000560692.5
CDS CCA 72 bp CGGGGTTTCTTTGTGCTAAGGAGAAACTGGTTTGCCTaGCATAAAGACCAAGTCAGAGAACTGCTCATTATG +
Preference number: 6 (lower is better)
Translates to: RGFFVLRRNWFA*HKDQVRELLIM
Trigger: CATAATGAGCAGTTCTCTGACTTGGTCTTTATGCCAGGCAAACCAGTTTCTCCTTAGCACAAAGAAACCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558252.5
ENST00000560692.5
CDS CCA 72 bp TTCCTATACAGAGCTGGCTTTGGAGGTAGGCAGAGTTaGCACAGCAATGACAAACCAACATACCTAAAGACA +
Preference number: 6 (lower is better)
Translates to: FLYRAGFGGRQS*HSNDKPTYLKT
Trigger: TGTCTTTAGGTATGTTGGTTTGTCATTGCTGTGCCAACTCTGCCTACCTCCAAAGCCAGCTCTGTATAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560692.5
CDS CAA 72 bp ATCACCACTGTGATGGAGCCTATAATCCGGATGTCATaGGTTGGATCCACCATCATCGAATCACTCTCCTTA +
Preference number: 6 (lower is better)
Translates to: ITTVMEPIIRMS*VGSTIIESLSL
Trigger: TAAGGAGAGTGATTCGATGATGGTGGATCCAACCAATGACATCCGGATTATAGGCTCCATCACAGTGGTGAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000330289.10
ENST00000380993.8
ENST00000396577.7
ENST00000558252.5
ENST00000559641.5
ENST00000559723.2
ENST00000560692.5
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS CAA 72 bp CGGATGCCTCCACTTTCCTCTTCACACTCATTATCTTaGATAGTCGCTTCCAATGCTAGTCTCTCCTGTTCT +
Preference number: 6 (lower is better)
Translates to: RMPPLSSSHSLS*IVASNASLSCS
Trigger: AGAACAGGAGAGACTAGCATTGGAAGCGACTATCAAAGATAATGAGTGTGAAGAGGAAAGTGGAGGCATCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000558252.5
ENST00000560692.5
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS CAA 90 bp TCCAAACTTCACAACACCAGCTTGATCATCTTCCTTATTTTCAGCTaGTTCATCTCCAGGTATCCCATCACCGTTAGCAACTCTGTCAGC +
Preference number: 6 (lower is better)
Translates to: SKLHNTSLIIFLIFS*FISRYPITVSNSVS
Trigger: GCTGACAGAGTTGCTAACGGTGATGGGATACCTGGAGATGAACAAGCTGAAAATAAGGAAGATGATCAAGCTGGTGTTGTGAAGTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000330289.10
ENST00000380993.8
ENST00000396577.7
ENST00000559641.5
ENST00000561031.1
ENST00000561127.5
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS CAA 90 bp CCTAGAAGAATCACCACTGTGATGGAGCCTATAATCCGGATGTCATaGGTTGGATCCACCATCATCGAATCACTCTCCTTAAGAAGATCT +
Preference number: 6 (lower is better)
Translates to: PRRITTVMEPIIRMS*VGSTIIESLSLRRS
Trigger: AGATCTTCTTAAGGAGAGTGATTCGATGATGGTGGATCCAACCAATGACATCCGGATTATAGGCTCCATCACAGTGGTGATTCTTCTAGG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000330289.10
ENST00000380993.8
ENST00000396577.7
ENST00000558252.5
ENST00000559641.5
ENST00000559723.2
ENST00000560692.5
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS CAA 90 bp AGGGAGCTTTCCTCCAGTTTTTCTTATATCCAATCACCAGAGTGTTaGGTTTCATTCTTCCTAAGCCTGAGGCCTGAAGAAGACTTCGGA +
Preference number: 6 (lower is better)
Translates to: RELSSSFSYIQSPEC*VSFFLSLRPEEDFG
Trigger: TCCGAAGTCTTCTTCAGGCCTCAGGCTTAGGAAGAATGAAACCAAACACTCTGGTGATTGGATATAAGAAAAACTGGAGGAAAGCTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000558252.5
ENST00000559641.5
ENST00000560692.5
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS CAA 90 bp AACAAGCCTCGGATGCCTCCACTTTCCTCTTCACACTCATTATCTTaGATAGTCGCTTCCAATGCTAGTCTCTCCTGTTCTAATCTCTCT +
Preference number: 6 (lower is better)
Translates to: NKPRMPPLSSSHSLS*IVASNASLSCSNLS
Trigger: AGAGAGATTAGAACAGGAGAGACTAGCATTGGAAGCGACTATCAAAGATAATGAGTGTGAAGAGGAAAGTGGAGGCATCCGAGGCTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000558252.5
ENST00000560692.5
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS TCA 72 bp CAGGTCATACCGGCTTTCACACCTAACTTCCTTGCTTaGTGGTTAAATTTATTGGAAACCATCTTGCCCCAG +
Preference number: 6 (lower is better)
Translates to: QVIPAFTPNFLA*WLNLLETILPQ
Trigger: CTGGGGCAAGATGGTTTCCAATAAATTTAACCATCAAGCAAGGAAGTTAGGTGTGAAAGCCGGTATGACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558252.5
CDS TCA 72 bp ACCAAATTCTTCATATCTATTGCAGGGATACTGTGGTaGGCAGTGCCTCTGTATCACTATGTGGCTTCAGGT +
Preference number: 6 (lower is better)
Translates to: TKFFISIAGILW*AVPLYHYVASG
Trigger: ACCTGAAGCCACATAGTGATACAGAGGCACTGCTCACCACAGTATCCCTGCAATAGATATGAAGAATTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558252.5
CDS TCA 72 bp CTGATTACCAGAGACAATTTTGGATGCTTATCAGCCTaGCAAAGGCACCACAGGCATCTACACAACAAGCTT +
Preference number: 6 (lower is better)
Translates to: LITRDNFGCLSA*QRHHRHLHNKL
Trigger: AAGCTTGTTGTGTAGATGCCTGTGGTGCCTTTGTCAGGCTGATAAGCATCCAAAATTGTCTCTGGTAATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558252.5
ENST00000560692.5
CDS GCA 72 bp GGTTTCTTCATAATGTGGTGGGTCAGTATTGTCATCTaGAGCTGCACTGCTCTCATGGTTCTCATTTATGAC +
Preference number: 6 (lower is better)
Translates to: GFFIMWWVSIVI*SCTALMVLIYD
Trigger: GTCATAAATGAGAACCATGAGAGCAGTGCAGCTGCAGATGACAATACTGACCCACCACATTATGAAGAAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000330289.10
ENST00000380993.8
ENST00000396577.7
ENST00000561031.1
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS GCA 72 bp GTAAAGGAAGAATTCAATGACATAGGTGATGACAGCTaGCCACCAGTTGATGACAAACATGACTGCACAGCA +
Preference number: 6 (lower is better)
Translates to: VKEEFNDIGDDS*PPVDDKHDCTA
Trigger: TGCTGTGCAGTCATGTTTGTCATCAACTGGTGGGCAGCTGTCATCACCTATGTCATTGAATTCTTCCTTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000558252.5
ENST00000559641.5
ENST00000560692.5
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS CAA 72 bp GTGAAAACTGGCATCTGTTTTAGCAGTTTCTCCACTTaGGAGGAAATTGTCATAGCACTCCTGATTCCCAGG +
Preference number: 6 (lower is better)
Translates to: VKTGICFSSFST*EEIVIALLIPR
Trigger: CCTGGGAATCAGGAGTGCTATGACAATTTCCTCCAAAGTGGAGAAACTGCTAAAACAGATGCCAGTTTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000330289.10
ENST00000380993.8
ENST00000396577.7
ENST00000561031.1
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS CAA 72 bp CACAACACCAGCTTGATCATCTTCCTTATTTTCAGCTaGTTCATCTCCAGGTATCCCATCACCGTTAGCAAC +
Preference number: 6 (lower is better)
Translates to: HNTSLIIFLIFS*FISRYPITVSN
Trigger: GTTGCTAACGGTGATGGGATACCTGGAGATGAACAAGCTGAAAATAAGGAAGATGATCAAGCTGGTGTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000330289.10
ENST00000380993.8
ENST00000396577.7
ENST00000559641.5
ENST00000561031.1
ENST00000561127.5
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS CAA 90 bp ATCATAAGCGTGAAAACTGGCATCTGTTTTAGCAGTTTCTCCACTTaGGAGGAAATTGTCATAGCACTCCTGATTCCCAGGCCTAAAGCT +
Preference number: 6 (lower is better)
Translates to: IISVKTGICFSSFST*EEIVIALLIPRPKA
Trigger: AGCTTTAGGCCTGGGAATCAGGAGTGCTATGACAATTTCCTCCAAAGTGGAGAAACTGCTAAAACAGATGCCAGTTTTCACGCTTATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000330289.10
ENST00000380993.8
ENST00000396577.7
ENST00000561031.1
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS TCA 72 bp GCACTGCTCTCATGGTTCTCATTTATGACACTAACTTaGAAGCGATTGGTATTACTGGGCACTGAATCCAGA +
Preference number: 6 (lower is better)
Translates to: ALLSWFSFMTLT*KRLVLLGTESR
Trigger: TCTGGATTCAGTGCCCAGTAATACCAATCGCTTTCAAGTTAGTGTCATAAATGAGAACCATGAGAGCAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000330289.10
ENST00000380993.8
ENST00000396577.7
ENST00000561031.1
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS GCA 72 bp TTCATAATGTGGTGGGTCAGTATTGTCATCTGCAGCTaGACTGCTCTCATGGTTCTCATTTATGACACTAAC +
Preference number: 6 (lower is better)
Translates to: FIMWWVSIVICS*TALMVLIYDTN
Trigger: GTTAGTGTCATAAATGAGAACCATGAGAGCAGTGCAGCTGCAGATGACAATACTGACCCACCACATTATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000330289.10
ENST00000380993.8
ENST00000396577.7
ENST00000561031.1
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS CAA 72 bp AAACACAATCGAAAGTGCAGACTTGGAAAGGAAAAGTaGACTTATGCTGGTGTCCTGGGAGAGAAACTATCC +
Preference number: 6 (lower is better)
Translates to: KHNRKCRLGKEK*TYAGVLGEKLS
Trigger: GGATAGTTTCTCTCCCAGGACACCAGCATAAGTCAACTTTTCCTTTCCAAGTCTGCACTTTCGATTGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558252.5
ENST00000560692.5
CDS CAA 72 bp TCCTCCAGTTTTTCTTATATCCAATCACCAGAGTGTTaGGTTTCATTCTTCCTAAGCCTGAGGCCTGAAGAA +
Preference number: 6 (lower is better)
Translates to: SSSFSYIQSPEC*VSFFLSLRPEE
Trigger: TTCTTCAGGCCTCAGGCTTAGGAAGAATGAAACCAAACACTCTGGTGATTGGATATAAGAAAAACTGGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000558252.5
ENST00000559641.5
ENST00000560692.5
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS CAA 72 bp TTTAGAAAAGAAAGGGAAACACCGAATGTAAGTGACTaGCTTCAGGTCATACCGGCTTTCACACCTAACTTC +
Preference number: 6 (lower is better)
Translates to: FRKERETPNVSD*LQVIPAFTPNF
Trigger: GAAGTTAGGTGTGAAAGCCGGTATGACCTGAAGCAAGTCACTTACATTCGGTGTTTCCCTTTCTTTTCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558252.5
CDS CAA 72 bp TTGGCTAGGAAATCACCATGGAGTAAATGCTTAGCTTaGAAGTTTTCTGCTTGTAGTAGCTCTGGTTCCAAG +
Preference number: 6 (lower is better)
Translates to: LARKSPWSKCLA*KFSACSSSGSK
Trigger: CTTGGAACCAGAGCTACTACAAGCAGAAAACTTCAAAGCTAAGCATTTACTCCATGGTGATTTCCTAGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558252.5
ENST00000560692.5
CDS CAA 90 bp CTTTTTGAGGGGACAGGCAATTTCTGCTTCCTCTTTCCTTTGCACTaGATTCTACTCTTGCTTGTTCTAATTCATATAAGGGAAGTCTGT +
Preference number: 6 (lower is better)
Translates to: LFEGTGNFCFLFPLH*ILLLLVLIHIREVC
Trigger: ACAGACTTCCCTTATATGAATTAGAACAAGCAAGAGTAGAATCAAGTGCAAAGGAAAGAGGAAGCAGAAATTGCCTGTCCCCTCAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS CCA 72 bp CAGGAGTCTACAAAAGGGTATCAGAATATATCACTCTaGCATAAGGATTATTTGGAGCTGAGACAACCGAAA +
Preference number: 6 (lower is better)
Translates to: QESTKGYQNISL*HKDYLELRQPK
Trigger: TTTCGGTTGTCTCAGCTCCAAATAATCCTTATGCCAGAGTGATATATTCTGATACCCTTTTGTAGACTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558252.5
ENST00000560692.5
CDS CAA 72 bp GGGACAGGCAATTTCTGCTTCCTCTTTCCTTTGCACTaGATTCTACTCTTGCTTGTTCTAATTCATATAAGG +
Preference number: 6 (lower is better)
Translates to: GTGNFCFLFPLH*ILLLLVLIHIR
Trigger: CCTTATATGAATTAGAACAAGCAAGAGTAGAATCAAGTGCAAAGGAAAGAGGAAGCAGAAATTGCCTGTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS CAA 72 bp TTTGAGGGGACAGGCAATTTCTGCTTCCTCTTTCCTTaGCACTTGATTCTACTCTTGCTTGTTCTAATTCAT +
Preference number: 6 (lower is better)
Translates to: FEGTGNFCFLFP*HLILLLLVLIH
Trigger: ATGAATTAGAACAAGCAAGAGTAGAATCAAGTGCAAAGGAAAGAGGAAGCAGAAATTGCCTGTCCCCTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330289.10
CDS TCA 72 bp CCTTATATATTTACCTTGGCAGCATTTGCCACCCTATaGATGAAAAGTCCTTTTCCTTTGTCTTATCACCTC +
Preference number: 6 (lower is better)
Translates to: PYIFTLAAFATL*MKSPFPLSYHL
Trigger: GAGGTGATAAGACAAAGGAAAAGGACTTTTCATTCATAGGGTGGCAAATGCTGCCAAGGTAAATATATAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558252.5
ENST00000560692.5
CDS GCA 72 bp CCATTCCTTTCCTTATATATTTACCTTGGCAGCATTTaGCACCCTATGAATGAAAAGTCCTTTTCCTTTGTC +
Preference number: 6 (lower is better)
Translates to: PFLSLYIYLGSI*HPMNEKSFSFV
Trigger: GACAAAGGAAAAGGACTTTTCATTCATAGGGTGGCAAATGCTGCCAAGGTAAATATATAAGGAAAGGAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558252.5
ENST00000560692.5
CDS CAA 72 bp TCAAAGACTTTCCAGCTCTCTTTGTTTGGCCTAATGTaGATGTCACCGATGATATGGATGTCTGCAAATTTT +
Preference number: 6 (lower is better)
Translates to: SKTFQLSLFGLM*MSPMIWMSANF
Trigger: AAAATTTGCAGACATCCATATCATCGGTGACATCAACATTAGGCCAAACAAAGAGAGCTGGAAAGTCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000558252.5
ENST00000560692.5
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS CCA 72 bp GATTGGTATTACTGGGCACTGAATCCAGAAATACATTaGAAGAGTTGTTCAGTGACATCTTCCAAAATTGAT +
Preference number: 6 (lower is better)
Translates to: DWYYWALNPEIH*KSCSVTSSKID
Trigger: ATCAATTTTGGAAGATGTCACTGAACAACTCTTCCAATGTATTTCTGGATTCAGTGCCCAGTAATACCAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330289.10
ENST00000380993.8
ENST00000396577.7
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS CAA 72 bp TTGCTGAGAGAAATTTCTTTCACTATAGTAACTCTTTaGGGCTCAGGGGTCAAAGTCCTGTCTAAAAATGTA +
Preference number: 6 (lower is better)
Translates to: LLREISFTIVTL*GSGVKVLSKNV
Trigger: TACATTTTTAGACAGGACTTTGACCCCTGAGCCCAAAAGAGTTACTATAGTGAAAGAAATTTCTCTCAGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560692.5
CDS GCA 72 bp ACAAGTTATTTTTGTTCAGTGAAGTTTTACCAATCATaGCAAGAAGGATACTCAATTCCAGCTTCTCCAACA +
Preference number: 6 (lower is better)
Translates to: TSYFCSVKFYQS*QEGYSIPASPT
Trigger: TGTTGGAGAAGCTGGAATTGAGTATCCTTCTTGGCATGATTGGTAAAACTTCACTGAACAAAAATAACTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561031.1
CDS CCA 72 bp AATTTCTCAGCAGTTGTTAAATCTTTGCAGCTTTCATaGAGACGATATGGTTCAATCATCTCTTCAAAGACT +
Preference number: 6 (lower is better)
Translates to: NFSAVVKSLQLS*RRYGSIISSKT
Trigger: AGTCTTTGAAGAGATGATTGAACCATATCGTCTCCATGAAAGCTGCAAAGATTTAACAACTGCTGAGAAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000380993.8
ENST00000396577.7
ENST00000558252.5
ENST00000560692.5
ENST00000646012.1
ENST00000647232.1
ENST00000647546.1
CDS TCA 72 bp TCACCTCTCTACGATTTAATTGTTCTGTTGTTAAGATaGTATATAAGCCCATGTTCTAAGCAACCCTTTAAG +
Preference number: 6 (lower is better)
Translates to: SPLYDLIVLLLR*YISPCSKQPFK
Trigger: CTTAAAGGGTTGCTTAGAACATGGGCTTATATATCATCTTAACAACAGAACAATTAAATCGTAGAGAGGTGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558252.5
ENST00000560692.5