RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC11A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000018280

Ensembl transcript IDs: ENST00000233202.11, ENST00000354352.9, ENST00000465984.5, ENST00000468221.5, ENST00000468721.1, ENST00000469449.1, ENST00000469799.5, ENST00000471875.5, ENST00000473367.5, ENST00000475225.5, ENST00000481524.5, ENST00000483487.2, ENST00000490536.1, ENST00000490872.1, ENST00000492413.5, ENST00000494322.5, ENST00000539932.5

Found 480 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGCAGGATGGCGCAGGAGCGGGTGAGGAGGACACGGGCGAAGCGTaGCCACCGCAGCCTCAGGAAGCCCTCCATCACGAACTGTCCCGC +
Preference number: 1 (lower is better)
Translates to: GQDGAGAGEEDTGEA*PPQPQEALHHELSR
Trigger: GCGGGACAGTTCGTGATGGAGGGCTTCCTGAGGCTGCGGTGGTCACGCTTCGCCCGTGTCCTCCTCACCCGCTCCTGCGCCATCCTGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354352.9
3UTR CCA 90 bp AACAAGCGTCCGGACCTGAGCGCGGAGCCAGGCCGCCTGCCCTGCTaGGTCCCCAGGAAATCGGGGGTTCTTCCAGGTGCAACACCCGGC +
Preference number: 1 (lower is better)
Translates to: NKRPDLSAEPGRLPC*VPRKSGVLPGATPG
Trigger: GCCGGGTGTTGCACCTGGAAGAACCCCCGATTTCCTGGGGACCCAGCAGGGCAGGCGGCCTGGCTCCGCGCTCAGGTCCGGACGCTTGTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR CCA 90 bp ATGATGATGGCGCCAACAATGCCCACCGCCTGCAGCAGCTCGGGGTaGCCGCAGCCCGGGCACGAGGGCAGGAACAGGCCCCGAAGAAGC +
Preference number: 1 (lower is better)
Translates to: MMMAPTMPTACSSSG*PQPGHEGRNRPRRS
Trigger: GCTTCTTCGGGGCCTGTTCCTGCCCTCGTGCCCGGGCTGCGGCCACCCCGAGCTGCTGCAGGCGGTGGGCATTGTTGGCGCCATCATCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
3UTR GCA 90 bp GCCAAACCCAGAGGAGGCGGGCGGCCCTCTTGCCCAGGTACCCTCTaGAGCGCTTGCCCAGGTCGCACCAGACCGGTCCCATCTCTTCTC +
Preference number: 1 (lower is better)
Translates to: AKPRGGGRPSCPGTL*SACPGRTRPVPSLL
Trigger: GAGAAGAGATGGGACCGGTCTGGTGCGACCTGGGCAAGCGCTGCAGAGGGTACCTGGGCAAGAGGGCCGCCCGCCTCCTCTGGGTTTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR GCA 90 bp CCCATCTTCTCCAGTGCCAAACCCAGAGGAGGCGGGCGGCCCTCTTaGCCAGGTACCCTCTGCAGCGCTTGCCCAGGTCGCACCAGACCG +
Preference number: 1 (lower is better)
Translates to: PIFSSAKPRGGGRPS*PGTLCSACPGRTRP
Trigger: CGGTCTGGTGCGACCTGGGCAAGCGCTGCAGAGGGTACCTGGGCAAGAGGGCCGCCCGCCTCCTCTGGGTTTGGCACTGGAGAAGATGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR GCA 90 bp AGAGGAGGCGGGCGGCCCTCTTGCCCAGGTACCCTCTGCAGCGCTTaGCCAGGTCGCACCAGACCGGTCCCATCTCTTCTCTCCTTGAGG +
Preference number: 1 (lower is better)
Translates to: RGGGRPSCPGTLCSA*PGRTRPVPSLLSLR
Trigger: CCTCAAGGAGAGAAGAGATGGGACCGGTCTGGTGCGACCTGGGCAAGCGCTGCAGAGGGTACCTGGGCAAGAGGGCCGCCCGCCTCCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR GCA 90 bp ATAAACAAGCGTCCGGACCTGAGCGCGGAGCCAGGCCGCCTGCCCTaGTGGGTCCCCAGGAAATCGGGGGTTCTTCCAGGTGCAACACCC +
Preference number: 1 (lower is better)
Translates to: INKRPDLSAEPGRLP*WVPRKSGVLPGATP
Trigger: GGGTGTTGCACCTGGAAGAACCCCCGATTTCCTGGGGACCCAGCAGGGCAGGCGGCCTGGCTCCGCGCTCAGGTCCGGACGCTTGTTTAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR GCA 90 bp GCCCCCAGGTTGGCTGGTCTCAGGAACTGTCCCACTCTATCCTGCTaGCTGCACGCGCCCCCTCCACATCCAGCAGGCCAGTCACGTCAT +
Preference number: 1 (lower is better)
Translates to: APRLAGLRNCPTLSC*LHAPPPHPAGQSRH
Trigger: ATGACGTGACTGGCCTGCTGGATGTGGAGGGGGCGCGTGCAGGCAGCAGGATAGAGTGGGACAGTTCCTGAGACCAGCCAACCTGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000233202.11
ENST00000354352.9
3UTR GCA 90 bp CCGCCTGCCCTGCTGGGTCCCCAGGAAATCGGGGGTTCTTCCAGGTaGAACACCCGGCCCAGGTTCAACTCTAGGGAAAGGCCTGTTGGC +
Preference number: 1 (lower is better)
Translates to: PPALLGPQEIGGSSR*NTRPRFNSRERPVG
Trigger: GCCAACAGGCCTTTCCCTAGAGTTGAACCTGGGCCGGGTGTTGCACCTGGAAGAACCCCCGATTTCCTGGGGACCCAGCAGGGCAGGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR GCA 90 bp AAAGCCCCCAGGTTGGCTGGTCTCAGGAACTGTCCCACTCTATCCTaGTGCCTGCACGCGCCCCCTCCACATCCAGCAGGCCAGTCACGT +
Preference number: 1 (lower is better)
Translates to: KAPRLAGLRNCPTLS*CLHAPPPHPAGQSR
Trigger: ACGTGACTGGCCTGCTGGATGTGGAGGGGGCGCGTGCAGGCAGCAGGATAGAGTGGGACAGTTCCTGAGACCAGCCAACCTGGGGGCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000233202.11
ENST00000354352.9
3UTR GCA 90 bp CCCATCCATCTCCTCCTTCAGCTGGCATGGACCCATCTTCTCCAGTaGCAAACCCAGAGGAGGCGGGCGGCCCTCTTGCCCAGGTACCCT +
Preference number: 1 (lower is better)
Translates to: PIHLLLQLAWTHLLQ*QTQRRRAALLPRYP
Trigger: AGGGTACCTGGGCAAGAGGGCCGCCCGCCTCCTCTGGGTTTGGCACTGGAGAAGATGGGTCCATGCCAGCTGAAGGAGGAGATGGATGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR CCA 90 bp GGAAGCCCTCCATCACGAACTGTCCCGCGTAGGTGCCCGTCATGGTaGAGCTCTGCCCAGCCGCCAGGAGACCTATGGCCCAGATGTAGA +
Preference number: 1 (lower is better)
Translates to: GSPPSRTVPRRCPSW*SSAQPPGDLWPRCR
Trigger: TCTACATCTGGGCCATAGGTCTCCTGGCGGCTGGGCAGAGCTCCACCATGACGGGCACCTACGCGGGACAGTTCGTGATGGAGGGCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354352.9
3UTR CCA 90 bp CTCCAGCCTCCATCACGAACTGTCCCGCGTAGGTGCCCGTCATGGTaGAGCTCTGCCCAGCCGCCAGGAGACCTATGGCCCAGATGTAGA +
Preference number: 1 (lower is better)
Translates to: LQPPSRTVPRRCPSW*SSAQPPGDLWPRCR
Trigger: TCTACATCTGGGCCATAGGTCTCCTGGCGGCTGGGCAGAGCTCCACCATGACGGGCACCTACGCGGGACAGTTCGTGATGGAGGCTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539932.5
3UTR CCA 90 bp TCCAGCAGGCCAGTCACGTCATACATGCCACTCCCAGCCAGGCCCTaGTGTGGGCCTAGCCAGAGGTCTCCCCTTTCTGGTCCTCTTCAA +
Preference number: 1 (lower is better)
Translates to: SSRPVTSYMPLPARP*CGPSQRSPLSGPLQ
Trigger: TTGAAGAGGACCAGAAAGGGGAGACCTCTGGCTAGGCCCACACCAGGGCCTGGCTGGGAGTGGCATGTATGACGTGACTGGCCTGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354352.9
3UTR GCA 90 bp GATGGTGGCCTCAATCAGGAAGTACATGTTGGCTTCTCTGATGTCTaGTCGGCGGGCCCGGTCTATCTCTCGAGACTTGACCAGGGCCGA +
Preference number: 1 (lower is better)
Translates to: DGGLNQEVHVGFSDV*SAGPVYLSRLDQGR
Trigger: TCGGCCCTGGTCAAGTCTCGAGAGATAGACCGGGCCCGCCGAGCAGACATCAGAGAAGCCAACATGTACTTCCTGATTGAGGCCACCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
3UTR GCA 90 bp CCAGCTGAGAGCAGATTGAATGCAATGGCCGTGCCGATGACTTCCTaGATGTCGGAGCCCACAATGGCTAGCTCGATGGTCAGCCAGAGG +
Preference number: 1 (lower is better)
Translates to: PAESRLNAMAVPMTS*MSEPTMASSMVSQR
Trigger: CCTCTGGCTGACCATCGAGCTAGCCATTGTGGGCTCCGACATGCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481524.5
ENST00000539932.5
3UTR CCA 90 bp ATGCCTTTCTTCGCTAAACGTCCCCCATCCATCTCCTCCTTCAGCTaGCATGGACCCATCTTCTCCAGTGCCAAACCCAGAGGAGGCGGG +
Preference number: 1 (lower is better)
Translates to: MPFFAKRPPSISSFS*HGPIFSSAKPRGGG
Trigger: CCCGCCTCCTCTGGGTTTGGCACTGGAGAAGATGGGTCCATGCCAGCTGAAGGAGGAGATGGATGGGGGACGTTTAGCGAAGAAAGGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR GCA 90 bp ACGGAGAAAGAAGTGCGCCGCCGTTTTACTGTCTGGAAAATGGGTTaGAGGCGGAACAGAAAGGCTGCGGCGAATAGGAGCGGACCAGAC +
Preference number: 1 (lower is better)
Translates to: TEKEVRRRFTVWKMG*RRNRKAAANRSGPD
Trigger: GTCTGGTCCGCTCCTATTCGCCGCAGCCTTTCTGTTCCGCCTGCAACCCATTTTCCAGACAGTAAAACGGCGGCGCACTTCTTTCTCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR TCA 90 bp GCGCTTGCCCAGGTCGCACCAGACCGGTCCCATCTCTTCTCTCCTTaGGGGACCCACTCGCATCGTTGCCCTTTTAAGAAAGAGGAAATT +
Preference number: 1 (lower is better)
Translates to: ALAQVAPDRSHLFSP*GTHSHRCPFKKEEI
Trigger: AATTTCCTCTTTCTTAAAAGGGCAACGATGCGAGTGGGTCCCTCAAGGAGAGAAGAGATGGGACCGGTCTGGTGCGACCTGGGCAAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR GCA 90 bp ACCAGACCCTGGTGTAGGGGTCTTCTGGATGCTTTAGAGACTTCGTaGCTTCCCGGTTCCCATTCCCTGCTCCTTTGGACGAGAAGGGAA +
Preference number: 1 (lower is better)
Translates to: TRPWCRGLLDALETS*LPGSHSLLLWTRRE
Trigger: TTCCCTTCTCGTCCAAAGGAGCAGGGAATGGGAACCGGGAAGGCACGAAGTCTCTAAAGCATCCAGAAGACCCCTACACCAGGGTCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR GCA 90 bp ATTTGGGCCTCAGAGGCACAGACTCTTGGGTTCCTTATGACCTGGTaGCTGACGGAGAAAGAAGTGCGCCGCCGTTTTACTGTCTGGAAA +
Preference number: 1 (lower is better)
Translates to: IWASEAQTLGFLMTW*LTEKEVRRRFTVWK
Trigger: TTTCCAGACAGTAAAACGGCGGCGCACTTCTTTCTCCGTCAGGCACCAGGTCATAAGGAACCCAAGAGTCTGTGCCTCTGAGGCCCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR CCA 90 bp CCTGAGGAAACAGCAAATAATTTGGGCCTCAGAGGCACAGACTCTTaGGTTCCTTATGACCTGGTGCCTGACGGAGAAAGAAGTGCGCCG +
Preference number: 1 (lower is better)
Translates to: PEETANNLGLRGTDS*VPYDLVPDGERSAP
Trigger: CGGCGCACTTCTTTCTCCGTCAGGCACCAGGTCATAAGGAACCCAAGAGTCTGTGCCTCTGAGGCCCAAATTATTTGCTGTTTCCTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR-3UTR CCA 90 bp AAGCGTCCGGACCTGAGCGCGGAGCCAGGCCGCCTGCCCTGCTGGGTCCCCAGGCTCCCCGAAGGATTCTaGGGCCCCTGGCGCGAGCCC +
Preference number: 2 (lower is better)
Translates to: KRPDLSAEPGRLPCWVPRLPEGF*GPWREP
Trigger: GGGCTCGCGCCAGGGGCCCCAGAATCCTTCGGGGAG...CCTGGGGACCCAGCAGGGCAGGCGGCCTGGCTCCGCGCTCAGGTCCGGACGCTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR-3UTR CCA 90 bp AACCCAGAGGAGGCGGGCGGCCCTCTTGCCCAGGTACCCTCTGCAGCGCTTGCCCAAATTAGCTGGGCGTaGTGGCGCGCGCCACTCCCG +
Preference number: 2 (lower is better)
Translates to: NPEEAGGPLAQVPSAALAQISWA*WRAPLP
Trigger: CGGGAGTGGCGCGCGCCACCACGCCCAGCTAATTTG...GGCAAGCGCTGCAGAGGGTACCTGGGCAAGAGGGCCGCCCGCCTCCTCTGGGTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR-3UTR CCA 90 bp GTGCCAAACCCAGAGGAGGCGGGCGGCCCTCTTGCCCAGGTACCCTCTGCAGCGAGTGCAGCCCCTGAATaGGGCGAATGGGTGCCCAGC +
Preference number: 2 (lower is better)
Translates to: VPNPEEAGGPLAQVPSAASAAPE*GEWVPS
Trigger: GCTGGGCACCCATTCGCCCCATTCAGGGGCTGCACT...CGCTGCAGAGGGTACCTGGGCAAGAGGGCCGCCCGCCTCCTCTGGGTTTGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR-3UTR CCA 90 bp TGGCCGCAGCCCGGGCACGAGGGCAGGAACAGGCCCCGAAGAAGCGCTCCCTGCTGTCGGAGCCCACAATaGCTAGCTCGATGGTCAGCC +
Preference number: 2 (lower is better)
Translates to: WPQPGHEGRNRPRRSAPCCRSPQ*LARWSA
Trigger: GGCTGACCATCGAGCTAGCCATTGTGGGCTCCGACA...GCAGGGAGCGCTTCTTCGGGGCCTGTTCCTGCCCTCGTGCCCGGGCTGCGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539932.5
3UTR CAA 90 bp CAGAGGAGGCGGGCGGCCCTCTTGCCCAGGTACCCTCTGCAGCGCTaGCCCAGGTCGCACCAGACCGGTCCCATCTCTTCTCTCCTTGAG +
Preference number: 2 (lower is better)
Translates to: QRRRAALLPRYPLQR*PRSHQTGPISSLLE
Trigger: CTCAAGGAGAGAAGAGATGGGACCGGTCTGGTGCGACCTGGGCAAGCGCTGCAGAGGGTACCTGGGCAAGAGGGCCGCCCGCCTCCTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR CAA 90 bp ACCCATCTTCTCCAGTGCCAAACCCAGAGGAGGCGGGCGGCCCTCTaGCCCAGGTACCCTCTGCAGCGCTTGCCCAGGTCGCACCAGACC +
Preference number: 2 (lower is better)
Translates to: THLLQCQTQRRRAAL*PRYPLQRLPRSHQT
Trigger: GGTCTGGTGCGACCTGGGCAAGCGCTGCAGAGGGTACCTGGGCAAGAGGGCCGCCCGCCTCCTCTGGGTTTGGCACTGGAGAAGATGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR-3UTR CCA 90 bp CTGGGTCCCCAGGAAATCGGGGGTTCTTCCAGGTGCAACACCCGGCCCAGGTTCGGGACCCGACGAGGCTaGAGGAGGGACTTGGGGGAG +
Preference number: 2 (lower is better)
Translates to: LGPQEIGGSSRCNTRPRFGTRRG*RRDLGE
Trigger: CTCCCCCAAGTCCCTCCTCCAGCCTCGTCGGGTCCC...GAACCTGGGCCGGGTGTTGCACCTGGAAGAACCCCCGATTTCCTGGGGACCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR-3UTR CCA 90 bp TGGCTGGTCTCAGGAACTGTCCCACTCTATCCTGCTGCCTGCACGCGCCCCCTCAGGTGCCCGTCATGGTaGAGCTCTGCCCAGCCGCCA +
Preference number: 2 (lower is better)
Translates to: WLVSGTVPLYPAACTRPLRCPSW*SSAQPP
Trigger: TGGCGGCTGGGCAGAGCTCCACCATGACGGGCACCT...GAGGGGGCGCGTGCAGGCAGCAGGATAGAGTGGGACAGTTCCTGAGACCAGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354352.9
3UTR-3UTR GCA 90 bp AAACCCAGAGGAGGCGGGCGGCCCTCTTGCCCAGGTACCCTCTGCAGCGCTTGCCAGTCACGTCATACATaGCACTCCCAGCCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: KPRGGGRPSCPGTLCSACQSRHT*HSQPGP
Trigger: AGGGCCTGGCTGGGAGTGGCATGTATGACGTGACTG...GCAAGCGCTGCAGAGGGTACCTGGGCAAGAGGGCCGCCCGCCTCCTCTGGGTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR CAA 90 bp ACGGCGAACGGGAGCAGCAGGCTCTGCAGCACGTTGAGCAGATCATaGAGGCCCGACAAGTCCCTCAGGTCCCGGAAGACAGCCACGAGC +
Preference number: 2 (lower is better)
Translates to: TANGSSRLCSTLSRS*RPDKSLRSRKTATS
Trigger: GCTCGTGGCTGTCTTCCGGGACCTGAGGGACTTGTCGGGCCTCAATGATCTGCTCAACGTGCTGCAGAGCCTGCTGCTCCCGTTCGCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354352.9
3UTR-3UTR TCA 90 bp AGAGGAAATTCTTCTCATAAACAAGCGTCCGGACCTGAGCGCGGAGCCAGGCCGTCCTGGGCTGGGGTCTaGGGGACCCGACGAGGCTGG +
Preference number: 2 (lower is better)
Translates to: RGNSSHKQASGPERGARPSWAGV*GTRRGW
Trigger: CCAGCCTCGTCGGGTCCCTCAGACCCCAGCCCAGGA...CGGCCTGGCTCCGCGCTCAGGTCCGGACGCTTGTTTATGAGAAGAATTTCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR-3UTR TCA 90 bp GATGTCTGCTCGGCGGGCCCGGTCTATCTCTCGAGACTTGACCAGGGCCGAGTGCAATGGCCGTGCCGATaGCTTCCTGCATGTCGGAGC +
Preference number: 2 (lower is better)
Translates to: DVCSAGPVYLSRLDQGRVQWPCR*LPACRS
Trigger: GCTCCGACATGCAGGAAGTCATCGGCACGGCCATTG...CACTCGGCCCTGGTCAAGTCTCGAGAGATAGACCGGGCCCGCCGAGCAGACATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
3UTR-3UTR CCA 90 bp AACCCAGAGGAGGCGGGCGGCCCTCTTGCCCAGGTACCCTCTGCAGCGCTTGCCCGCCGTTTTACTGTCTaGAAAATGGGTTGCAGGCGG +
Preference number: 2 (lower is better)
Translates to: NPEEAGGPLAQVPSAALARRFTV*KMGCRR
Trigger: CCGCCTGCAACCCATTTTCCAGACAGTAAAACGGCG...GGCAAGCGCTGCAGAGGGTACCTGGGCAAGAGGGCCGCCCGCCTCCTCTGGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR-3UTR CCA 90 bp GGTTGGCTGGTCTCAGGAACTGTCCCACTCTATCCTGCTGCCTGCACGCGCCCCTGTGGGCCAGAAAGGTaGCTCCGTGGGCAAGGCAAC +
Preference number: 2 (lower is better)
Translates to: GWLVSGTVPLYPAACTRPCGPER*LRGQGN
Trigger: GTTGCCTTGCCCACGGAGCCACCTTTCTGGCCCACA...GGGGCGCGTGCAGGCAGCAGGATAGAGTGGGACAGTTCCTGAGACCAGCCAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354352.9
3UTR-3UTR GCA 90 bp CCCGACAAGTCCCTCAGGTCCCGGAAGACAGCCACGAGCACGGTGGGCAGGATGGTGCCGATGACTTCCTaGATGTCGGAGCCCACAATG +
Preference number: 2 (lower is better)
Translates to: PDKSLRSRKTATSTVGRMVPMTS*MSEPTM
Trigger: CATTGTGGGCTCCGACATGCAGGAAGTCATCGGCAC...CATCCTGCCCACCGTGCTCGTGGCTGTCTTCCGGGACCTGAGGGACTTGTCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354352.9
3UTR-3UTR CCA 90 bp GGTTGGCTGGTCTCAGGAACTGTCCCACTCTATCCTGCTGCCTGCACGCGCCCCGAGCGGACCAGACCCTaGTGTAGGGGTCTTCTGGAT +
Preference number: 2 (lower is better)
Translates to: GWLVSGTVPLYPAACTRPERTRP*CRGLLD
Trigger: ATCCAGAAGACCCCTACACCAGGGTCTGGTCCGCTC...GGGGCGCGTGCAGGCAGCAGGATAGAGTGGGACAGTTCCTGAGACCAGCCAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR-3UTR TCA 90 bp TTCTCTGATGTCTGCTCGGCGGGCCCGGTCTATCTCTCGAGACTTGACCAGGGCCAATGGCCGTGCCGATaGCTTCCTGCATGTCGGAGC +
Preference number: 2 (lower is better)
Translates to: FSDVCSAGPVYLSRLDQGQWPCR*LPACRS
Trigger: GCTCCGACATGCAGGAAGTCATCGGCACGGCCATTG...GCCCTGGTCAAGTCTCGAGAGATAGACCGGGCCCGCCGAGCAGACATCAGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
3UTR-3UTR TCA 90 bp TGCTCGGCGGGCCCGGTCTATCTCTCGAGACTTGACCAGGGCCGAGTGCAGGTACAGCTGAGAGCAGATTaGATGCAATGGCCGTGCCGA +
Preference number: 2 (lower is better)
Translates to: CSAGPVYLSRLDQGRVQVQLRAD*MQWPCR
Trigger: TCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTG...TACCTGCACTCGGCCCTGGTCAAGTCTCGAGAGATAGACCGGGCCCGCCGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
3UTR-3UTR GCA 90 bp GTGGGAGTCGCGGCCGCCGGCTCCCCTGAGGAAACAGCAAATAATTTGGGCCTCCCGGTTCCCATTCCCTaGTCCTTTGGACGAGAAGGG +
Preference number: 2 (lower is better)
Translates to: VGVAAAGSPEETANNLGLPVPIP*SFGREG
Trigger: CCCTTCTCGTCCAAAGGAGCAGGGAATGGGAACCGG...GAGGCCCAAATTATTTGCTGTTTCCTCAGGGGAGCCGGCGGCCGCGACTCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR-3UTR GCA 90 bp AACCCAGAGGAGGCGGGCGGCCCTCTTGCCCAGGTACCCTCTGCAGCGCTTGCCTTCCTTATGACCTGGTaGCTGACGGAGAAAGAAGTG +
Preference number: 2 (lower is better)
Translates to: NPEEAGGPLAQVPSAALAFLMTW*LTEKEV
Trigger: CACTTCTTTCTCCGTCAGGCACCAGGTCATAAGGAA...GGCAAGCGCTGCAGAGGGTACCTGGGCAAGAGGGCCGCCCGCCTCCTCTGGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR-3UTR GCA 90 bp GTAAATGTCCACGGCCACGGTGGCGTTGTTCATGGGGAAGATCTTGGCGTAGTCACAATGCCCACCGCCTaGAGCAGCTCGGGGTGGCCG +
Preference number: 2 (lower is better)
Translates to: VNVHGHGGVVHGEDLGVVTMPTA*SSSGWP
Trigger: CGGCCACCCCGAGCTGCTGCAGGCGGTGGGCATTGT...GACTACGCCAAGATCTTCCCCATGAACAACGCCACCGTGGCCGTGGACATTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
3UTR-3UTR CCA 90 bp AAACCCAGAGGAGGCGGGCGGCCCTCTTGCCCAGGTACCCTCTGCAGCGCTTGCCCTCCATGGCAAGGGTaGTGGTGTCTCCATTTTACA +
Preference number: 2 (lower is better)
Translates to: KPRGGGRPSCPGTLCSACPPWQG*WCLHFT
Trigger: TGTAAAATGGAGACACCACCACCCTTGCCATGGAGG...GCAAGCGCTGCAGAGGGTACCTGGGCAAGAGGGCCGCCCGCCTCCTCTGGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR-3UTR CCA 90 bp CCCCAGGAAATCGGGGGTTCTTCCAGGTGCAACACCCGGCCCAGGTTCAACTCTGCTGGAGGAGGGACTTaGGGGAGCCTAGAAACAGCC +
Preference number: 2 (lower is better)
Translates to: PQEIGGSSRCNTRPRFNSAGGGT*GSLETA
Trigger: GGCTGTTTCTAGGCTCCCCCAAGTCCCTCCTCCAGC...AGAGTTGAACCTGGGCCGGGTGTTGCACCTGGAAGAACCCCCGATTTCCTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR-3UTR CCA 90 bp ACTAGCACCATGATGGAAGAGGTGACGACCTTGTTCAGCAGGCCATTGGCAAACTGCAGCAGCTCGGGGTaGCCGCAGCCCGGGCACGAG +
Preference number: 2 (lower is better)
Translates to: TSTMMEEVTTLFSRPLANCSSSG*PQPGHE
Trigger: CTCGTGCCCGGGCTGCGGCCACCCCGAGCTGCTGCA...GTTTGCCAATGGCCTGCTGAACAAGGTCGTCACCTCTTCCATCATGGTGCTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354352.9
3UTR-3UTR TCA 90 bp CGCCCTCTGGGCTACATGAAGGAAACAAAGCTGAGTGGGGTGGCTCACGTCTGTGGAGGGCAGATCACCTaGGGCTGGGAGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: RPLGYMKETKLSGVAHVCGGQIT*GWEFET
Trigger: GGTCTCGAACTCCCAGCCTCAGGTGATCTGCCCTCC...ACAGACGTGAGCCACCCCACTCAGCTTTGTTTCCTTCATGTAGCCCAGAGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539932.5
3UTR-3UTR GCA 90 bp GCGTGGGAGTCGCGGCCGCCGGCTCCCCTGAGGAAACAGCAAATAATTTGGGCCGCTTTAGAGACTTCGTaGCTTCCCGGTTCCCATTCC +
Preference number: 2 (lower is better)
Translates to: AWESRPPAPLRKQQIIWAALETS*LPGSHS
Trigger: GGAATGGGAACCGGGAAGGCACGAAGTCTCTAAAGC...GGCCCAAATTATTTGCTGTTTCCTCAGGGGAGCCGGCGGCCGCGACTCCCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR-3UTR CCA 90 bp CGGGAGGCTGAAGTTGAGGCTGCAGCGAGCTGTGATGGCGCCATTGCACTCCAGCGGACAGGGCGATGGTaGCCTCAATCAGGAAGTACA +
Preference number: 2 (lower is better)
Translates to: REAEVEAAASCDGAIALQRTGRW*PQSGST
Trigger: TGTACTTCCTGATTGAGGCCACCATCGCCCTGTCCG...CTGGAGTGCAATGGCGCCATCACAGCTCGCTGCAGCCTCAACTTCAGCCTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539932.5
3UTR-3UTR CCA 90 bp CGGGAGGCTGAAGTTGAGGCTGCAGCGAGCTGTGATGGCGCCATTGCACTCCAGAGACGGACAGGGCGATaGTGGCCTCAATCAGGAAGT +
Preference number: 2 (lower is better)
Translates to: REAEVEAAASCDGAIALQRRTGR*WPQSGS
Trigger: ACTTCCTGATTGAGGCCACCATCGCCCTGTCCGTCT...CTGGAGTGCAATGGCGCCATCACAGCTCGCTGCAGCCTCAACTTCAGCCTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539932.5
3UTR CAA 90 bp GTGGGAGTCGCGGCCGCCGGCTCCCCTGAGGAAACAGCAAATAATTaGGGCCTCAGAGGCACAGACTCTTGGGTTCCTTATGACCTGGTG +
Preference number: 2 (lower is better)
Translates to: VGVAAAGSPEETANN*GLRGTDSWVPYDLV
Trigger: CACCAGGTCATAAGGAACCCAAGAGTCTGTGCCTCTGAGGCCCAAATTATTTGCTGTTTCCTCAGGGGAGCCGGCGGCCGCGACTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR-3UTR GCA 90 bp TGGCTGGTCTCAGGAACTGTCCCACTCTATCCTGCTGCCTGCACGCGCCCCCTCTTAAGATTGCGCCACTaGACTCCAGCCTTGGCAACA +
Preference number: 2 (lower is better)
Translates to: WLVSGTVPLYPAACTRPLLRLRH*TPALAT
Trigger: TGTTGCCAAGGCTGGAGTGCAGTGGCGCAATCTTAA...GAGGGGGCGCGTGCAGGCAGCAGGATAGAGTGGGACAGTTCCTGAGACCAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR-3UTR GCA 90 bp CGCCCTCTGGGCTACATGAAGGAAACAAAGCTGAGTGGGGTGGCTCACGTCTGTACTGTCCCGCGTAGGTaGCCGTCATGGTGGAGCTCT +
Preference number: 2 (lower is better)
Translates to: RPLGYMKETKLSGVAHVCTVPRR*PSWWSS
Trigger: AGAGCTCCACCATGACGGGCACCTACGCGGGACAGT...ACAGACGTGAGCCACCCCACTCAGCTTTGTTTCCTTCATGTAGCCCAGAGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539932.5
3UTR-3UTR CCA 90 bp GGTCGCACCAGACCGGTCCCATCTCTTCTCTCCTTGAGGGACCCACTCGCATCGTTTCAAGCTCCAGTTTaGAGCCTGTGTCCCGCCCAA +
Preference number: 2 (lower is better)
Translates to: GRTRPVPSLLSLRDPLASFQAPV*SLCPAQ
Trigger: TTGGGCGGGACACAGGCTCCAAACTGGAGCTTGAAA...CGATGCGAGTGGGTCCCTCAAGGAGAGAAGAGATGGGACCGGTCTGGTGCGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR CAA 90 bp AAGGAGACGGACAGGGCGATGGTGGCCTCAATCAGGAAGTACATGTaGGCTTCTCTGATGTCTGCTCGGCGGGCCCGGTCTATCTCTCGA +
Preference number: 2 (lower is better)
Translates to: KETDRAMVASIRKYM*ASLMSARRARSISR
Trigger: TCGAGAGATAGACCGGGCCCGCCGAGCAGACATCAGAGAAGCCAACATGTACTTCCTGATTGAGGCCACCATCGCCCTGTCCGTCTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
3UTR-3UTR CCA 90 bp CCTGTAGTCCCAATGACTCGGGAGGCTGAAGTTGAGGCTGCAGCGAGCTGTGATTGTCCACGGCCACGGTaGCGTTGTTCATGGGGAAGA +
Preference number: 2 (lower is better)
Translates to: PVVPMTREAEVEAAASCDCPRPR*RCSWGR
Trigger: TCTTCCCCATGAACAACGCCACCGTGGCCGTGGACA...ATCACAGCTCGCTGCAGCCTCAACTTCAGCCTCCCGAGTCATTGGGACTACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539932.5
3UTR-3UTR TCA 90 bp CGCCCTCTGGGCTACATGAAGGAAACAAAGCTGAGTGGGGTGGCTCACGTCTGTCAGCTGAGAGCAGATTaGATGCAATGGCCGTGCCGA +
Preference number: 2 (lower is better)
Translates to: RPLGYMKETKLSGVAHVCQLRAD*MQWPCR
Trigger: TCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTG...ACAGACGTGAGCCACCCCACTCAGCTTTGTTTCCTTCATGTAGCCCAGAGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539932.5
3UTR-3UTR TCA 90 bp GTTCATGGGGAAGATCTTGGCGTAGTCGTGGAGGCTGCTGTTGGCACAGATGTTACATGTTGGCTTCTCTaGTGTCTGCTCGGCGGGCCC +
Preference number: 2 (lower is better)
Translates to: VHGEDLGVVVEAAVGTDVTCWLL*CLLGGP
Trigger: GGGCCCGCCGAGCAGACATCAGAGAAGCCAACATGT...AACATCTGTGCCAACAGCAGCCTCCACGACTACGCCAAGATCTTCCCCATGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
3UTR-3UTR TCA 90 bp ACAGATGTTGAACGCAGCCTGGTTGGTTTTCTGGTAGAAGGCCTGCCCAAAGACACATGTTGGCTTCTCTaGTGTCTGCTCGGCGGGCCC +
Preference number: 2 (lower is better)
Translates to: TDVERSLVGFLVEGLPKDTCWLL*CLLGGP
Trigger: GGGCCCGCCGAGCAGACATCAGAGAAGCCAACATGT...GTCTTTGGGCAGGCCTTCTACCAGAAAACCAACCAGGCTGCGTTCAACATCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
3UTR-3UTR CCA 90 bp GTGGGAGTCGCGGCCGCCGGCTCCCCTGAGGAAACAGCAAATAATTTGGGCCTCTTACTGTCTGGAAAATaGGTTGCAGGCGGAACAGAA +
Preference number: 2 (lower is better)
Translates to: VGVAAAGSPEETANNLGLLLSGK*VAGGTE
Trigger: TTCTGTTCCGCCTGCAACCCATTTTCCAGACAGTAA...GAGGCCCAAATTATTTGCTGTTTCCTCAGGGGAGCCGGCGGCCGCGACTCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR-3UTR CCA 90 bp CGAGTGCAGGTAGATGTTGTGGGGCATGATGATGGCGCCAACAATGCCCACCGCCCATGGCAAGGGTGGTaGTGTCTCCATTTTACAGAT +
Preference number: 2 (lower is better)
Translates to: RVQVDVVGHDDGANNAHRPWQGW*CLHFTD
Trigger: ATCTGTAAAATGGAGACACCACCACCCTTGCCATGG...GCGGTGGGCATTGTTGGCGCCATCATCATGCCCCACAACATCTACCTGCACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354352.9
3UTR-3UTR CCA 90 bp AGAGGAAATTCTTCTCATAAACAAGCGTCCGGACCTGAGCGCGGAGCCAGGCCGAGAGGCACAGACTCTTaGGTTCCTTATGACCTGGTG +
Preference number: 2 (lower is better)
Translates to: RGNSSHKQASGPERGARPRGTDS*VPYDLV
Trigger: CACCAGGTCATAAGGAACCCAAGAGTCTGTGCCTCT...CGGCCTGGCTCCGCGCTCAGGTCCGGACGCTTGTTTATGAGAAGAATTTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR-3UTR CCA 90 bp GTCTGGAAAATGGGTTGCAGGCGGAACAGAAAGGCTGCGGCGAATAGGAGCGGACCATGGCAAGGGTGGTaGTGTCTCCATTTTACAGAT +
Preference number: 2 (lower is better)
Translates to: VWKMGCRRNRKAAANRSGPWQGW*CLHFTD
Trigger: ATCTGTAAAATGGAGACACCACCACCCTTGCCATGG...TCCGCTCCTATTCGCCGCAGCCTTTCTGTTCCGCCTGCAACCCATTTTCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR-3UTR CCA 90 bp ATCTCTTCTCTCCTTGAGGGACCCACTCGCATCGTTGCCCTTTTAAGAAAGAGGAATACACAAATTAGCTaGGCGTGGTGGCGCGCGCCA +
Preference number: 2 (lower is better)
Translates to: ISSLLEGPTRIVALLRKRNTQIS*AWWRAP
Trigger: TGGCGCGCGCCACCACGCCCAGCTAATTTGTGTATT...CCTCTTTCTTAAAAGGGCAACGATGCGAGTGGGTCCCTCAAGGAGAGAAGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR-3UTR CCA 90 bp CGTTTTACTGTCTGGAAAATGGGTTGCAGGCGGAACAGAAAGGCTGCGGCGAATCATTCCCTGCTCCTTTaGACGAGAAGGGAACTAGTA +
Preference number: 2 (lower is better)
Translates to: RFTVWKMGCRRNRKAAANHSLLL*TRRELV
Trigger: TACTAGTTCCCTTCTCGTCCAAAGGAGCAGGGAATG...ATTCGCCGCAGCCTTTCTGTTCCGCCTGCAACCCATTTTCCAGACAGTAAAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR-3UTR GCA 90 bp TTGTTTGTTTTTGTCCCAAGTGCCAGACACTGTGTTAAAGTGCTTAACCTCCATCTGTCAGGTCACGCCTaGAGGTGCTCAATAAATACC +
Preference number: 2 (lower is better)
Translates to: LFVFVPSARHCVKVLNLHLSGHA*RCSINT
Trigger: GGTATTTATTGAGCACCTGCAGGCGTGACCTGACAG...ATGGAGGTTAAGCACTTTAACACAGTGTCTGGCACTTGGGACAAAAACAAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR CCA 72 bp GCGCCAACAATGCCCACCGCCTGCAGCAGCTCGGGGTaGCCGCAGCCCGGGCACGAGGGCAGGAACAGGCCC +
Preference number: 3 (lower is better)
Translates to: APTMPTACSSSG*PQPGHEGRNRP
Trigger: GGGCCTGTTCCTGCCCTCGTGCCCGGGCTGCGGCCACCCCGAGCTGCTGCAGGCGGTGGGCATTGTTGGCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
3UTR GCA 72 bp CGTCCGGACCTGAGCGCGGAGCCAGGCCGCCTGCCCTaGTGGGTCCCCAGGAAATCGGGGGTTCTTCCAGGT +
Preference number: 3 (lower is better)
Translates to: RPDLSAEPGRLP*WVPRKSGVLPG
Trigger: ACCTGGAAGAACCCCCGATTTCCTGGGGACCCAGCAGGGCAGGCGGCCTGGCTCCGCGCTCAGGTCCGGACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR GCA 72 bp AGAGGAGGCGGGCGGCCCTCTTGCCCAGGTACCCTCTaGAGCGCTTGCCCAGGTCGCACCAGACCGGTCCCA +
Preference number: 3 (lower is better)
Translates to: RGGGRPSCPGTL*SACPGRTRPVP
Trigger: TGGGACCGGTCTGGTGCGACCTGGGCAAGCGCTGCAGAGGGTACCTGGGCAAGAGGGCCGCCCGCCTCCTCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR GCA 72 bp TCCAGTGCCAAACCCAGAGGAGGCGGGCGGCCCTCTTaGCCAGGTACCCTCTGCAGCGCTTGCCCAGGTCGC +
Preference number: 3 (lower is better)
Translates to: SSAKPRGGGRPS*PGTLCSACPGR
Trigger: GCGACCTGGGCAAGCGCTGCAGAGGGTACCTGGGCAAGAGGGCCGCCCGCCTCCTCTGGGTTTGGCACTGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR TCA 72 bp GGCGCAGGAGCGGGTGAGGAGGACACGGGCGAAGCGTaGCCACCGCAGCCTCAGGAAGCCCTCCATCACGAA +
Preference number: 3 (lower is better)
Translates to: GAGAGEEDTGEA*PPQPQEALHHE
Trigger: TTCGTGATGGAGGGCTTCCTGAGGCTGCGGTGGTCACGCTTCGCCCGTGTCCTCCTCACCCGCTCCTGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354352.9
3UTR GCA 72 bp GGGCGGCCCTCTTGCCCAGGTACCCTCTGCAGCGCTTaGCCAGGTCGCACCAGACCGGTCCCATCTCTTCTC +
Preference number: 3 (lower is better)
Translates to: GRPSCPGTLCSA*PGRTRPVPSLL
Trigger: GAGAAGAGATGGGACCGGTCTGGTGCGACCTGGGCAAGCGCTGCAGAGGGTACCTGGGCAAGAGGGCCGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR-3UTR CAA 90 bp AAACCCAGAGGAGGCGGGCGGCCCTCTTGCCCAGGTACCCTCTGCAGCGCTTGCATTTCAAGCTCCAGTTaGGAGCCTGTGTCCCGCCCA +
Preference number: 3 (lower is better)
Translates to: KPRGGGRPSCPGTLCSACISSSS*EPVSRP
Trigger: TGGGCGGGACACAGGCTCCAAACTGGAGCTTGAAAT...GCAAGCGCTGCAGAGGGTACCTGGGCAAGAGGGCCGCCCGCCTCCTCTGGGTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR-3UTR CAA 90 bp AAACCCAGAGGAGGCGGGCGGCCCTCTTGCCCAGGTACCCTCTGCAGCGCTTGCCCATTCCCTGCTCCTTaGGACGAGAAGGGAACTAGT +
Preference number: 3 (lower is better)
Translates to: KPRGGGRPSCPGTLCSACPFPAP*DEKGTS
Trigger: ACTAGTTCCCTTCTCGTCCAAAGGAGCAGGGAATGG...GCAAGCGCTGCAGAGGGTACCTGGGCAAGAGGGCCGCCCGCCTCCTCTGGGTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR-3UTR CAA 90 bp TGGGAGCTGTGGGCCAGAAAGGTGGCTCCGTGGGCAAGGCAACAGGTCCAGACCACGTTGAGCAGATCATaGAGGCCCGACAAGTCCCTC +
Preference number: 3 (lower is better)
Translates to: WELWARKVAPWARQQVQTTLSRS*RPDKSL
Trigger: GAGGGACTTGTCGGGCCTCAATGATCTGCTCAACGT...GGTCTGGACCTGTTGCCTTGCCCACGGAGCCACCTTTCTGGCCCACAGCTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354352.9
3UTR GCA 72 bp CTGCTGGGTCCCCAGGAAATCGGGGGTTCTTCCAGGTaGAACACCCGGCCCAGGTTCAACTCTAGGGAAAGG +
Preference number: 3 (lower is better)
Translates to: LLGPQEIGGSSR*NTRPRFNSRER
Trigger: CCTTTCCCTAGAGTTGAACCTGGGCCGGGTGTTGCACCTGGAAGAACCCCCGATTTCCTGGGGACCCAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR-3UTR CAA 90 bp TGGGAGCTGTGGGCCAGAAAGGTGGCTCCGTGGGCAAGGCAACAGGTCCAGACCGCCATGACAAAGAGGTaGATGATAAAGGAGACGGAC +
Preference number: 3 (lower is better)
Translates to: WELWARKVAPWARQQVQTAMTKR*MIKETD
Trigger: GTCCGTCTCCTTTATCATCAACCTCTTTGTCATGGC...GGTCTGGACCTGTTGCCTTGCCCACGGAGCCACCTTTCTGGCCCACAGCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354352.9
3UTR CCA 72 bp CCTGGTAAATGTCCACGGCCACGGTGGCGTTGTTCATaGGGAAGATCTTGGCGTAGTCGTGGAGGCTGCTGT +
Preference number: 3 (lower is better)
Translates to: PGKCPRPRWRCS*GRSWRSRGGCC
Trigger: ACAGCAGCCTCCACGACTACGCCAAGATCTTCCCCATGAACAACGCCACCGTGGCCGTGGACATTTACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
3UTR-3UTR CAA 90 bp GTCCCCCATCCATCTCCTCCTTCAGCTGGCATGGACCCATCTTCTCCAGTGCCATGTCTGGAAAATGGGTaGCAGGCGGAACAGAAAGGC +
Preference number: 3 (lower is better)
Translates to: VPHPSPPSAGMDPSSPVPCLENG*QAEQKG
Trigger: GCCTTTCTGTTCCGCCTGCAACCCATTTTCCAGACA...TGGCACTGGAGAAGATGGGTCCATGCCAGCTGAAGGAGGAGATGGATGGGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR TCA 72 bp TGGTGGCCTCAATCAGGAAGTACATGTTGGCTTCTCTaGTGTCTGCTCGGCGGGCCCGGTCTATCTCTCGAG +
Preference number: 3 (lower is better)
Translates to: WWPQSGSTCWLL*CLLGGPGLSLE
Trigger: CTCGAGAGATAGACCGGGCCCGCCGAGCAGACATCAGAGAAGCCAACATGTACTTCCTGATTGAGGCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
3UTR GCA 72 bp GAAGTGCGCCGCCGTTTTACTGTCTGGAAAATGGGTTaGAGGCGGAACAGAAAGGCTGCGGCGAATAGGAGC +
Preference number: 3 (lower is better)
Translates to: EVRRRFTVWKMG*RRNRKAAANRS
Trigger: GCTCCTATTCGCCGCAGCCTTTCTGTTCCGCCTGCAACCCATTTTCCAGACAGTAAAACGGCGGCGCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR GCA 72 bp CGGGGGCACTTCCAGGAGGCTAAAGGATCTGGGAGATaGCTTTCTTCGCTAAACGTCCCCCATCCATCTCCT +
Preference number: 3 (lower is better)
Translates to: RGHFQEAKGSGR*LSSLNVPHPSP
Trigger: AGGAGATGGATGGGGGACGTTTAGCGAAGAAAGGCATCTCCCAGATCCTTTAGCCTCCTGGAAGTGCCCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR GCA 72 bp GTGACGACCTTGTTCAGCAGGCCATTGGCAAACTCCTaGATGAGGGTGGGCATGCTGGTGAACGTGAGGATG +
Preference number: 3 (lower is better)
Translates to: VTTLFSRPLANS*MRVGMLVNVRM
Trigger: CATCCTCACGTTCACCAGCATGCCCACCCTCATGCAGGAGTTTGCCAATGGCCTGCTGAACAAGGTCGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354352.9
3UTR TCA 72 bp CAGGTCGCACCAGACCGGTCCCATCTCTTCTCTCCTTaGGGGACCCACTCGCATCGTTGCCCTTTTAAGAAA +
Preference number: 3 (lower is better)
Translates to: QVAPDRSHLFSP*GTHSHRCPFKK
Trigger: TTTCTTAAAAGGGCAACGATGCGAGTGGGTCCCTCAAGGAGAGAAGAGATGGGACCGGTCTGGTGCGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR GCA 72 bp TGGTGTAGGGGTCTTCTGGATGCTTTAGAGACTTCGTaGCTTCCCGGTTCCCATTCCCTGCTCCTTTGGACG +
Preference number: 3 (lower is better)
Translates to: WCRGLLDALETS*LPGSHSLLLWT
Trigger: CGTCCAAAGGAGCAGGGAATGGGAACCGGGAAGGCACGAAGTCTCTAAAGCATCCAGAAGACCCCTACACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR GCA 72 bp AGCAGATTGAATGCAATGGCCGTGCCGATGACTTCCTaGATGTCGGAGCCCACAATGGCTAGCTCGATGGTC +
Preference number: 3 (lower is better)
Translates to: SRLNAMAVPMTS*MSEPTMASSMV
Trigger: GACCATCGAGCTAGCCATTGTGGGCTCCGACATGCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481524.5
ENST00000539932.5
3UTR CCA 72 bp CTGACGGAGAAAGAAGTGCGCCGCCGTTTTACTGTCTaGAAAATGGGTTGCAGGCGGAACAGAAAGGCTGCG +
Preference number: 3 (lower is better)
Translates to: LTEKEVRRRFTV*KMGCRRNRKAA
Trigger: CGCAGCCTTTCTGTTCCGCCTGCAACCCATTTTCCAGACAGTAAAACGGCGGCGCACTTCTTTCTCCGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR GCA 72 bp CTCAATCAGGAAGTACATGTTGGCTTCTCTGATGTCTaGTCGGCGGGCCCGGTCTATCTCTCGAGACTTGAC +
Preference number: 3 (lower is better)
Translates to: LNQEVHVGFSDV*SAGPVYLSRLD
Trigger: GTCAAGTCTCGAGAGATAGACCGGGCCCGCCGAGCAGACATCAGAGAAGCCAACATGTACTTCCTGATTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
3UTR-3UTR CAA 90 bp ATCATTGAGGCCCGACAAGTCCCTCAGGTCCCGGAAGACAGCCACGAGCACGGTTTCGTTTGTTTGTTTTaGTCCCAAGTGCCAGACACT +
Preference number: 3 (lower is better)
Translates to: IIEARQVPQVPEDSHEHGFVCLF*SQVPDT
Trigger: AGTGTCTGGCACTTGGGACAAAAACAAACAAACGAA...ACCGTGCTCGTGGCTGTCTTCCGGGACCTGAGGGACTTGTCGGGCCTCAATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354352.9
3UTR-3UTR CAA 90 bp CCTGTAGTCCCAATGACTCGGGAGGCTGAAGTTGAGGCTGCAGCGAGCTGTGATGCCATGACAAAGAGGTaGATGATAAAGGAGACGGAC +
Preference number: 3 (lower is better)
Translates to: PVVPMTREAEVEAAASCDAMTKR*MIKETD
Trigger: GTCCGTCTCCTTTATCATCAACCTCTTTGTCATGGC...ATCACAGCTCGCTGCAGCCTCAACTTCAGCCTCCCGAGTCATTGGGACTACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539932.5
3UTR CCA 72 bp AGAAAGAAGTGCGCCGCCGTTTTACTGTCTGGAAAATaGGTTGCAGGCGGAACAGAAAGGCTGCGGCGAATA +
Preference number: 3 (lower is better)
Translates to: RKKCAAVLLSGK*VAGGTERLRRI
Trigger: TATTCGCCGCAGCCTTTCTGTTCCGCCTGCAACCCATTTTCCAGACAGTAAAACGGCGGCGCACTTCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR-3UTR CAA 90 bp AGACCCTGGTGTAGGGGTCTTCTGGATGCTTTAGAGACTTCGTGCCTTCCCGGTAATAAAGAGAATCGCTaGAACCCAGAAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: RPWCRGLLDALETSCLPGNKENR*NPEGGG
Trigger: ACCTCCACCTTCTGGGTTCAAGCGATTCTCTTTATT...ACCGGGAAGGCACGAAGTCTCTAAAGCATCCAGAAGACCCCTACACCAGGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR-3UTR CAA 90 bp CATGGGGAAGATCTTGGCGTAGTCGTGGAGGCTGCTGTTGGCACAGATGTTGAAATCAGGAAGTACATGTaGGCTTCTCTGATGTCTGCT +
Preference number: 3 (lower is better)
Translates to: HGEDLGVVVEAAVGTDVEIRKYM*ASLMSA
Trigger: AGCAGACATCAGAGAAGCCAACATGTACTTCCTGAT...TTCAACATCTGTGCCAACAGCAGCCTCCACGACTACGCCAAGATCTTCCCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
3UTR CCA 72 bp ACAGCAAATAATTTGGGCCTCAGAGGCACAGACTCTTaGGTTCCTTATGACCTGGTGCCTGACGGAGAAAGA +
Preference number: 3 (lower is better)
Translates to: TANNLGLRGTDS*VPYDLVPDGER
Trigger: TCTTTCTCCGTCAGGCACCAGGTCATAAGGAACCCAAGAGTCTGTGCCTCTGAGGCCCAAATTATTTGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR-3UTR CAA 90 bp ATCTCTTCTCTCCTTGAGGGACCCACTCGCATCGTTGCCCTTTTAAGAAAGAGGGAAACAGCAAATAATTaGGGCCTCAGAGGCACAGAC +
Preference number: 3 (lower is better)
Translates to: ISSLLEGPTRIVALLRKRETANN*GLRGTD
Trigger: GTCTGTGCCTCTGAGGCCCAAATTATTTGCTGTTTC...CCTCTTTCTTAAAAGGGCAACGATGCGAGTGGGTCCCTCAAGGAGAGAAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR GCA 72 bp TTGTTTTTGTCCCAAGTGCCAGACACTGTGTTAAAGTaGTTAACCTCCATGGCAAGGGTGGTGGTGTCTCCA +
Preference number: 3 (lower is better)
Translates to: LFLSQVPDTVLK*LTSMARVVVSP
Trigger: TGGAGACACCACCACCCTTGCCATGGAGGTTAAGCACTTTAACACAGTGTCTGGCACTTGGGACAAAAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000233202.11
ENST00000354352.9
3UTR CCA 72 bp TTTAACATTCATCAGACACTATTTCAAGCTCCAGTTTaGAGCCTGTGTCCCGCCCAAGTCCTCAAGCCCTCA +
Preference number: 3 (lower is better)
Translates to: FNIHQTLFQAPV*SLCPAQVLKPS
Trigger: TGAGGGCTTGAGGACTTGGGCGGGACACAGGCTCCAAACTGGAGCTTGAAATAGTGTCTGATGAATGTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR-3UTR CAA 90 bp CGTTTTACTGTCTGGAAAATGGGTTGCAGGCGGAACAGAAAGGCTGCGGCGAATTTCGTTTGTTTGTTTTaGTCCCAAGTGCCAGACACT +
Preference number: 3 (lower is better)
Translates to: RFTVWKMGCRRNRKAAANFVCLF*SQVPDT
Trigger: AGTGTCTGGCACTTGGGACAAAAACAAACAAACGAA...ATTCGCCGCAGCCTTTCTGTTCCGCCTGCAACCCATTTTCCAGACAGTAAAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR-3UTR CAA 90 bp CACTATTTCAAGCTCCAGTTTGGAGCCTGTGTCCCGCCCAAGTCCTCAAGCCCTATGTTTTTCGTTTGTTaGTTTTTGTCCCAAGTGCCA +
Preference number: 3 (lower is better)
Translates to: HYFKLQFGACVPPKSSSPMFFVC*FLSQVP
Trigger: TGGCACTTGGGACAAAAACAAACAAACGAAAAACAT...AGGGCTTGAGGACTTGGGCGGGACACAGGCTCCAAACTGGAGCTTGAAATAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR-3UTR CAA 90 bp ACTAGCACCATGATGGAAGAGGTGACGACCTTGTTCAGCAGGCCATTGGCAAACATGTTTTTCGTTTGTTaGTTTTTGTCCCAAGTGCCA +
Preference number: 3 (lower is better)
Translates to: TSTMMEEVTTLFSRPLANMFFVC*FLSQVP
Trigger: TGGCACTTGGGACAAAAACAAACAAACGAAAAACAT...GTTTGCCAATGGCCTGCTGAACAAGGTCGTCACCTCTTCCATCATGGTGCTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR GCA 90 bp TGGCCGCAGCCCGGGCACGAGGGCAGGAACAGGCCCCGAAGAAGCGCTCCCTGCTCTCTGGGAGGTGCTTaGTGTGGCCCTGGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: WPQPGHEGRNRPRRSAPCSLGGA*CGPGLV
Trigger: GACCAGCCCAGGGCCACAGCAAGCACCTCCCAGAGA...GCAGGGAGCGCTTCTTCGGGGCCTGTTCCTGCCCTCGTGCCCGGGCTGCGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR GCA 90 bp TGGCCGCAGCCCGGGCACGAGGGCAGGAACAGGCCCCGAAGAAGCGCTCCCTGCCCTCGCCCAAGTCCTTaGCTGTCACCACGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: WPQPGHEGRNRPRRSAPCPRPSP*LSPRPD
Trigger: GTCTGGGCGTGGTGACAGGCAAGGACTTGGGCGAGG...GCAGGGAGCGCTTCTTCGGGGCCTGTTCCTGCCCTCGTGCCCGGGCTGCGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR CCA 90 bp GGTGGCCGCAGCCCGGGCACGAGGGCAGGAACAGGCCCCGAAGAAGCGCTCCCTGCAAGCCCAACACGGTaGCCCAGAGCAGCACCCAGA +
Preference number: 4 (lower is better)
Translates to: GGRSPGTRAGTGPEEALPASPTR*PRAAPR
Trigger: TCTGGGTGCTGCTCTGGGCCACCGTGTTGGGCTTGC...AGGGAGCGCTTCTTCGGGGCCTGTTCCTGCCCTCGTGCCCGGGCTGCGGCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR CCA 90 bp CAGGTCCCGGAAGACAGCCACGAGCACGGTGGGCAGGATGGCGCAGGAGCGGGTCAGCCACGAGCACGGTaGGCAGGATGGCGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: QVPEDSHEHGGQDGAGAGQPRAR*AGWRRS
Trigger: GCTCCTGCGCCATCCTGCCCACCGTGCTCGTGGCTG...ACCCGCTCCTGCGCCATCCTGCCCACCGTGCTCGTGGCTGTCTTCCGGGACCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR CCA 90 bp AAACCCAGAGGAGGCGGGCGGCCCTCTTGCCCAGGTACCCTCTGCAGCGCTTGCGGGAGGTGCTTGCTGTaGCCCTGGGCTGGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: KPRGGGRPSCPGTLCSACGRCLL*PWAGRA
Trigger: AGCCCGACCAGCCCAGGGCCACAGCAAGCACCTCCC...GCAAGCGCTGCAGAGGGTACCTGGGCAAGAGGGCCGCCCGCCTCCTCTGGGTTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CCA 90 bp GATGTCTGCTCGGCGGGCCCGGTCTATCTCTCGAGACTTGACCAGGGCCGAGTGTGCAGCAGCTCGGGGTaGCCGCAGCCCGGGCACGAG +
Preference number: 4 (lower is better)
Translates to: DVCSAGPVYLSRLDQGRVCSSSG*PQPGHE
Trigger: CTCGTGCCCGGGCTGCGGCCACCCCGAGCTGCTGCA...CACTCGGCCCTGGTCAAGTCTCGAGAGATAGACCGGGCCCGCCGAGCAGACATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
3UTR CAA 72 bp CTCCAGTGCCAAACCCAGAGGAGGCGGGCGGCCCTCTaGCCCAGGTACCCTCTGCAGCGCTTGCCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: LQCQTQRRRAAL*PRYPLQRLPRS
Trigger: CGACCTGGGCAAGCGCTGCAGAGGGTACCTGGGCAAGAGGGCCGCCCGCCTCCTCTGGGTTTGGCACTGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR TCA 90 bp CTGGGTCCCCAGGAAATCGGGGGTTCTTCCAGGTGCAACACCCGGCCCAGGTTCTCCTGGGCTGGGGTCTaGGGGACCCGACGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LGPQEIGGSSRCNTRPRFSWAGV*GTRRGW
Trigger: CCAGCCTCGTCGGGTCCCTCAGACCCCAGCCCAGGA...GAACCTGGGCCGGGTGTTGCACCTGGAAGAACCCCCGATTTCCTGGGGACCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CCA 90 bp AGAGGAGGCGGGCGGCCCTCTTGCCCAGGTACCCTCTGCAGCGCTTGCCCAGGTCGTGCAGCCAGTCGCTaGCAGAGCAAGCCCAACACG +
Preference number: 4 (lower is better)
Translates to: RGGGRPSCPGTLCSACPGRAASR*QSKPNT
Trigger: CGTGTTGGGCTTGCTCTGCCAGCGACTGGCTGCACG...ACCTGGGCAAGCGCTGCAGAGGGTACCTGGGCAAGAGGGCCGCCCGCCTCCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CCA 90 bp AAACCCAGAGGAGGCGGGCGGCCCTCTTGCCCAGGTACCCTCTGCAGCGCTTGCAGGTGCCCGTCATGGTaGAGCTCTGCCCAGCCGCCA +
Preference number: 4 (lower is better)
Translates to: KPRGGGRPSCPGTLCSACRCPSW*SSAQPP
Trigger: TGGCGGCTGGGCAGAGCTCCACCATGACGGGCACCT...GCAAGCGCTGCAGAGGGTACCTGGGCAAGAGGGCCGCCCGCCTCCTCTGGGTTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CCA 90 bp GCCCCCTCCACATCCAGCAGGCCAGTCACGTCATACATGCCACTCCCAGCCAGGGGCCGCCTGCCCTGCTaGGTCCCCAGGAAATCGGGG +
Preference number: 4 (lower is better)
Translates to: APSTSSRPVTSYMPLPARGRLPC*VPRKSG
Trigger: CCCCGATTTCCTGGGGACCCAGCAGGGCAGGCGGCC...CCTGGCTGGGAGTGGCATGTATGACGTGACTGGCCTGCTGGATGTGGAGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR CAA 72 bp CGGGCGGCCCTCTTGCCCAGGTACCCTCTGCAGCGCTaGCCCAGGTCGCACCAGACCGGTCCCATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: RAALLPRYPLQR*PRSHQTGPISS
Trigger: AGAAGAGATGGGACCGGTCTGGTGCGACCTGGGCAAGCGCTGCAGAGGGTACCTGGGCAAGAGGGCCGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR TCA 90 bp CACGAGGGCAGGAACAGGCCCCGAAGAAGCGCTCCCTGCTCAGGACGCGCCACCGGCGGGAAGATCACTTaGGCCCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: HEGRNRPRRSAPCSGRATGGKIT*AQEFET
Trigger: GGTCTCGAACTCCTGGGCTCAAGTGATCTTCCCGCC...GGTGGCGCGTCCTGAGCAGGGAGCGCTTCTTCGGGGCCTGTTCCTGCCCTCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539932.5
CDS-3UTR GCA 90 bp GGCATGATGATGGCGCCAACAATGCCCACCGCCTGCAGCAGCTCGGGGTGGCCGGGTCTCTCTGGGAGGTaGTTGCTGTGGCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GMMMAPTMPTACSSSGWPGLSGR*LLWPWA
Trigger: AGCCCAGGGCCACAGCAAGCACCTCCCAGAGAGACC...CGGCCACCCCGAGCTGCTGCAGGCGGTGGGCATTGTTGGCGCCATCATCATGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR GCA 90 bp TGGTGGGAGCTGTGGGCCAGAAAGGTGGCTCCGTGGGCAAGGCAACAGGTCCAGACAATGCCCACCGCCTaGAGCAGCTCGGGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: WWELWARKVAPWARQQVQTMPTA*SSSGWP
Trigger: CGGCCACCCCGAGCTGCTGCAGGCGGTGGGCATTGT...CTGGACCTGTTGCCTTGCCCACGGAGCCACCTTTCTGGCCCACAGCTCCCACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR TCA 90 bp CTGGGTCCCCAGGAAATCGGGGGTTCTTCCAGGTGCAACACCCGGCCCAGGTTCGACACGGGCGAAGCGTaGCCACCGCAGCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LGPQEIGGSSRCNTRPRFDTGEA*PPQPQE
Trigger: TTCCTGAGGCTGCGGTGGTCACGCTTCGCCCGTGTC...GAACCTGGGCCGGGTGTTGCACCTGGAAGAACCCCCGATTTCCTGGGGACCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR TCA 90 bp GGTTGGCTGGTCTCAGGAACTGTCCCACTCTATCCTGCTGCCTGCACGCGCCCCAGACCAGGTAGGTGCTaGGGCCCAGGTAGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: GWLVSGTVPLYPAACTRPRPGRC*GPGRLR
Trigger: CCGCAGCCTACCTGGGCCTCAGCACCTACCTGGTCT...GGGGCGCGTGCAGGCAGCAGGATAGAGTGGGACAGTTCCTGAGACCAGCCAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233202.11
ENST00000354352.9
CDS-3UTR GCA 90 bp GTGGGAGTCGCGGCCGCCGGCTCCCCTGAGGAAACAGCAAATAATTTGGGCCTCACAATGCCCACCGCCTaGAGCAGCTCGGGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: VGVAAAGSPEETANNLGLTMPTA*SSSGWP
Trigger: CGGCCACCCCGAGCTGCTGCAGGCGGTGGGCATTGT...GAGGCCCAAATTATTTGCTGTTTCCTCAGGGGAGCCGGCGGCCGCGACTCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR GCA 90 bp GCCCCCTCCACATCCAGCAGGCCAGTCACGTCATACATGCCACTCCCAGCCAGGTGCCCAGGTACCCTCTaGAGCGCTTGCCCAGGTCGC +
Preference number: 4 (lower is better)
Translates to: APSTSSRPVTSYMPLPARCPGTL*SACPGR
Trigger: GCGACCTGGGCAAGCGCTGCAGAGGGTACCTGGGCA...CCTGGCTGGGAGTGGCATGTATGACGTGACTGGCCTGCTGGATGTGGAGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CCA 90 bp AGGCCGCCTGCCCTGCTGGGTCCCCAGGAAATCGGGGGTTCTTCCAGGTGCAACCCTGAATGGGGCGAATaGGTGCCCAGCCGCTCCCTA +
Preference number: 4 (lower is better)
Translates to: RPPALLGPQEIGGSSRCNPEWGE*VPSRSL
Trigger: TAGGGAGCGGCTGGGCACCCATTCGCCCCATTCAGG...GTTGCACCTGGAAGAACCCCCGATTTCCTGGGGACCCAGCAGGGCAGGCGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR TCA 90 bp GCCCCCTCCACATCCAGCAGGCCAGTCACGTCATACATGCCACTCCCAGCCAGGGGTACTCTGGGAGTGTaGGCGGTGCTCTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: APSTSSRPVTSYMPLPARGTLGV*AVLWAA
Trigger: AGCTGCCCAGAGCACCGCTCACACTCCCAGAGTACC...CCTGGCTGGGAGTGGCATGTATGACGTGACTGGCCTGCTGGATGTGGAGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000233202.11
ENST00000354352.9
CDS-3UTR TCA 90 bp TTGTGGGGCATGATGATGGCGCCAACAATGCCCACCGCCTGCAGCAGCTCGGGGGGTACTCTGGGAGTGTaGGCGGTGCTCTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LWGMMMAPTMPTACSSSGGTLGV*AVLWAA
Trigger: AGCTGCCCAGAGCACCGCTCACACTCCCAGAGTACC...CCCCGAGCTGCTGCAGGCGGTGGGCATTGTTGGCGCCATCATCATGCCCCACAA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR GCA 90 bp CTGATGTCTGCTCGGCGGGCCCGGTCTATCTCTCGAGACTTGACCAGGGCCGAGTGGGAGTGTGAGCGGTaGTCTGGGCAGCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LMSARRARSISRDLTRAEWECER*SGQLLS
Trigger: GCTGAGGAGCTGCCCAGAGCACCGCTCACACTCCCA...CTCGGCCCTGGTCAAGTCTCGAGAGATAGACCGGGCCCGCCGAGCAGACATCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR GCA 90 bp GGTTGGCTGGTCTCAGGAACTGTCCCACTCTATCCTGCTGCCTGCACGCGCCCCTCTCTGGGAGGTGCTTaGTGTGGCCCTGGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: GWLVSGTVPLYPAACTRPSLGGA*CGPGLV
Trigger: GACCAGCCCAGGGCCACAGCAAGCACCTCCCAGAGA...GGGGCGCGTGCAGGCAGCAGGATAGAGTGGGACAGTTCCTGAGACCAGCCAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233202.11
ENST00000354352.9
CDS-3UTR GCA 90 bp GCGTGGGAGTCGCGGCCGCCGGCTCCCCTGAGGAAACAGCAAATAATTTGGGCCGGTCTCTCTGGGAGGTaGTTGCTGTGGCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: AWESRPPAPLRKQQIIWAGLSGR*LLWPWA
Trigger: AGCCCAGGGCCACAGCAAGCACCTCCCAGAGAGACC...GGCCCAAATTATTTGCTGTTTCCTCAGGGGAGCCGGCGGCCGCGACTCCCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR GCA 90 bp GGTTGGCTGGTCTCAGGAACTGTCCCACTCTATCCTGCTGCCTGCACGCGCCCCCGAAGAAGCGCTCCCTaGTCAGGACGCGCCACCACA +
Preference number: 4 (lower is better)
Translates to: GWLVSGTVPLYPAACTRPRRSAP*SGRATT
Trigger: TGTGGTGGCGCGTCCTGAGCAGGGAGCGCTTCTTCG...GGGGCGCGTGCAGGCAGCAGGATAGAGTGGGACAGTTCCTGAGACCAGCCAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000233202.11
ENST00000354352.9
CDS-3UTR GCA 90 bp ATGTCGGAGCCCACAATGGCTAGCTCGATGGTCAGCCAGAGGACGGTGCGGGGCCGAAGAAGCGCTCCCTaGTCAGGACGCGCCACCACA +
Preference number: 4 (lower is better)
Translates to: MSEPTMASSMVSQRTVRGRRSAP*SGRATT
Trigger: TGTGGTGGCGCGTCCTGAGCAGGGAGCGCTTCTTCG...GCCCCGCACCGTCCTCTGGCTGACCATCGAGCTAGCCATTGTGGGCTCCGACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539932.5
CDS-3UTR GCA 90 bp TCCCACTCTATCCTGCTGCCTGCACGCGCCCCCTCCACATCCAGCAGGCCAGTCGGCTTCTCTGATGTCTaGTCGGCGGGCCCGGTCTAT +
Preference number: 4 (lower is better)
Translates to: SHSILLPARAPSTSSRPVGFSDV*SAGPVY
Trigger: ATAGACCGGGCCCGCCGAGCAGACATCAGAGAAGCC...GACTGGCCTGCTGGATGTGGAGGGGGCGCGTGCAGGCAGCAGGATAGAGTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000233202.11
ENST00000354352.9
CDS-3UTR GCA 90 bp CCAGGCCGCCTGCCCTGCTGGGTCCCCAGGAAATCGGGGGTTCTTCCAGGTGCACCGGTTCCCATTCCCTaGTCCTTTGGACGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: PGRLPCWVPRKSGVLPGAPVPIP*SFGREG
Trigger: CCCTTCTCGTCCAAAGGAGCAGGGAATGGGAACCGG...TGCACCTGGAAGAACCCCCGATTTCCTGGGGACCCAGCAGGGCAGGCGGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR GCA 90 bp CCCCAGGAAATCGGGGGTTCTTCCAGGTGCAACACCCGGCCCAGGTTCAACTCTCCAGGCCGCCTGCCCTaGTGGGTCCCCAGGAAATCG +
Preference number: 4 (lower is better)
Translates to: PQEIGGSSRCNTRPRFNSPGRLP*WVPRKS
Trigger: CGATTTCCTGGGGACCCAGCAGGGCAGGCGGCCTGG...AGAGTTGAACCTGGGCCGGGTGTTGCACCTGGAAGAACCCCCGATTTCCTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CCA 90 bp AGAGGAGGCGGGCGGCCCTCTTGCCCAGGTACCCTCTGCAGCGCTTGCCCAGGTCGACTTCAGGTACTCTaGGAGTGTGAGCGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: RGGGRPSCPGTLCSACPGRLQVL*ECERCS
Trigger: AGAGCACCGCTCACACTCCCAGAGTACCTGAAGTCG...ACCTGGGCAAGCGCTGCAGAGGGTACCTGGGCAAGAGGGCCGCCCGCCTCCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CCA 90 bp GGCGACGGAGCGAGACTCCGACTTAGGGTAGTAGAGATGGCAGACCTCGCCCAAGGGAGGTGCTTGCTGTaGCCCTGGGCTGGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: GDGARLRLRVVEMADLAQGRCLL*PWAGRA
Trigger: AGCCCGACCAGCCCAGGGCCACAGCAAGCACCTCCC...TTGGGCGAGGTCTGCCATCTCTACTACCCTAAGTCGGAGTCTCGCTCCGTCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473367.5
CDS-3UTR CCA 90 bp GGTTGGCTGGTCTCAGGAACTGTCCCACTCTATCCTGCTGCCTGCACGCGCCCCGCAAGCCCAACACGGTaGCCCAGAGCAGCACCCAGA +
Preference number: 4 (lower is better)
Translates to: GWLVSGTVPLYPAACTRPASPTR*PRAAPR
Trigger: TCTGGGTGCTGCTCTGGGCCACCGTGTTGGGCTTGC...GGGGCGCGTGCAGGCAGCAGGATAGAGTGGGACAGTTCCTGAGACCAGCCAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233202.11
ENST00000354352.9
CDS-3UTR CCA 90 bp CACGGGCGAAGCGTGACCACCGCAGCCTCAGGAAGCCCTCCATCACGAACTGTCCCGCCAGGAGACCTATaGCCCAGATGTAGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: HGRSVTTAASGSPPSRTVPPGDL*PRCRGP
Trigger: CGGCCCTCTACATCTGGGCCATAGGTCTCCTGGCGG...GACAGTTCGTGATGGAGGGCTTCCTGAGGCTGCGGTGGTCACGCTTCGCCCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR CCA 90 bp AGAGGAGGCGGGCGGCCCTCTTGCCCAGGTACCCTCTGCAGCGCTTGCCCAGGTAATACACAAATTAGCTaGGCGTGGTGGCGCGCGCCA +
Preference number: 4 (lower is better)
Translates to: RGGGRPSCPGTLCSACPGNTQIS*AWWRAP
Trigger: TGGCGCGCGCCACCACGCCCAGCTAATTTGTGTATT...ACCTGGGCAAGCGCTGCAGAGGGTACCTGGGCAAGAGGGCCGCCCGCCTCCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR TCA 90 bp GGCATGATGATGGCGCCAACAATGCCCACCGCCTGCAGCAGCTCGGGGTGGCCGCCACGAAGTAGAGGTTaGTGGCGCAGACTAGCACCA +
Preference number: 4 (lower is better)
Translates to: GMMMAPTMPTACSSSGWPPRSRG*WRRLAP
Trigger: TGGTGCTAGTCTGCGCCATCAACCTCTACTTCGTGG...CGGCCACCCCGAGCTGCTGCAGGCGGTGGGCATTGTTGGCGCCATCATCATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR GCA 90 bp CTGGGCGACGGAGCGAGACTCCGACTTAGGGTAGTAGAGATGGCAGACCTCGCCTGGGAGTGTGAGCGGTaGTCTGGGCAGCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LGDGARLRLRVVEMADLAWECER*SGQLLS
Trigger: GCTGAGGAGCTGCCCAGAGCACCGCTCACACTCCCA...GGCGAGGTCTGCCATCTCTACTACCCTAAGTCGGAGTCTCGCTCCGTCGCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473367.5
CDS-3UTR GCA 90 bp CTGGGCGACGGAGCGAGACTCCGACTTAGGGTAGTAGAGATGGCAGACCTCGCCTCTCTGGGAGGTGCTTaGTGTGGCCCTGGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: LGDGARLRLRVVEMADLASLGGA*CGPGLV
Trigger: GACCAGCCCAGGGCCACAGCAAGCACCTCCCAGAGA...GGCGAGGTCTGCCATCTCTACTACCCTAAGTCGGAGTCTCGCTCCGTCGCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473367.5
CDS-3UTR GCA 90 bp CTGGGCGACGGAGCGAGACTCCGACTTAGGGTAGTAGAGATGGCAGACCTCGCCGGTCTCTCTGGGAGGTaGTTGCTGTGGCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LGDGARLRLRVVEMADLAGLSGR*LLWPWA
Trigger: AGCCCAGGGCCACAGCAAGCACCTCCCAGAGAGACC...GGCGAGGTCTGCCATCTCTACTACCCTAAGTCGGAGTCTCGCTCCGTCGCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473367.5
CDS-3UTR GCA 90 bp TGGCTGGTCTCAGGAACTGTCCCACTCTATCCTGCTGCCTGCACGCGCCCCCTCACTGTCCCGCGTAGGTaGCCGTCATGGTGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: WLVSGTVPLYPAACTRPLTVPRR*PSWWSS
Trigger: AGAGCTCCACCATGACGGGCACCTACGCGGGACAGT...GAGGGGGCGCGTGCAGGCAGCAGGATAGAGTGGGACAGTTCCTGAGACCAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000233202.11
ENST00000354352.9
CDS-3UTR CCA 90 bp GCCCCCTCCACATCCAGCAGGCCAGTCACGTCATACATGCCACTCCCAGCCAGGTGGTCGGGCTGGAGATaGAACCATAGCTGGACCCGC +
Preference number: 4 (lower is better)
Translates to: APSTSSRPVTSYMPLPARWSGWR*NHSWTR
Trigger: GCGGGTCCAGCTATGGTTCCATCTCCAGCCCGACCA...CCTGGCTGGGAGTGGCATGTATGACGTGACTGGCCTGCTGGATGTGGAGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000233202.11
ENST00000354352.9
CDS-3UTR CCA 90 bp CTGGGCGACGGAGCGAGACTCCGACTTAGGGTAGTAGAGATGGCAGACCTCGCCGCAAGCCCAACACGGTaGCCCAGAGCAGCACCCAGA +
Preference number: 4 (lower is better)
Translates to: LGDGARLRLRVVEMADLAASPTR*PRAAPR
Trigger: TCTGGGTGCTGCTCTGGGCCACCGTGTTGGGCTTGC...GGCGAGGTCTGCCATCTCTACTACCCTAAGTCGGAGTCTCGCTCCGTCGCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473367.5
CDS-3UTR CCA 90 bp CGGAGAAAGAAGTGCGCCGCCGTTTTACTGTCTGGAAAATGGGTTGCAGGCGGATGCAGCAGCTCGGGGTaGCCGCAGCCCGGGCACGAG +
Preference number: 4 (lower is better)
Translates to: RRKKCAAVLLSGKWVAGGCSSSG*PQPGHE
Trigger: CTCGTGCCCGGGCTGCGGCCACCCCGAGCTGCTGCA...TCCGCCTGCAACCCATTTTCCAGACAGTAAAACGGCGGCGCACTTCTTTCTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CCA 90 bp GGTCGCACCAGACCGGTCCCATCTCTTCTCTCCTTGAGGGACCCACTCGCATCGCCGCCAGGAGACCTATaGCCCAGATGTAGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: GRTRPVPSLLSLRDPLASPPGDL*PRCRGP
Trigger: CGGCCCTCTACATCTGGGCCATAGGTCTCCTGGCGG...CGATGCGAGTGGGTCCCTCAAGGAGAGAAGAGATGGGACCGGTCTGGTGCGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CCA 90 bp GCCCCCTCCACATCCAGCAGGCCAGTCACGTCATACATGCCACTCCCAGCCAGGTGTGGGCCAGAAAGGTaGCTCCGTGGGCAAGGCAAC +
Preference number: 4 (lower is better)
Translates to: APSTSSRPVTSYMPLPARCGPER*LRGQGN
Trigger: GTTGCCTTGCCCACGGAGCCACCTTTCTGGCCCACA...CCTGGCTGGGAGTGGCATGTATGACGTGACTGGCCTGCTGGATGTGGAGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000233202.11
ENST00000354352.9
CDS-3UTR CCA 90 bp GATGTCTGCTCGGCGGGCCCGGTCTATCTCTCGAGACTTGACCAGGGCCGAGTGTGTGGGCCAGAAAGGTaGCTCCGTGGGCAAGGCAAC +
Preference number: 4 (lower is better)
Translates to: DVCSAGPVYLSRLDQGRVCGPER*LRGQGN
Trigger: GTTGCCTTGCCCACGGAGCCACCTTTCTGGCCCACA...CACTCGGCCCTGGTCAAGTCTCGAGAGATAGACCGGGCCCGCCGAGCAGACATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR CCA 90 bp GTCCCCCATCCATCTCCTCCTTCAGCTGGCATGGACCCATCTTCTCCAGTGCCAGGGACCCGACGAGGCTaGAGGAGGGACTTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: VPHPSPPSAGMDPSSPVPGTRRG*RRDLGE
Trigger: CTCCCCCAAGTCCCTCCTCCAGCCTCGTCGGGTCCC...TGGCACTGGAGAAGATGGGTCCATGCCAGCTGAAGGAGGAGATGGATGGGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CCA 90 bp CTGGGCGACGGAGCGAGACTCCGACTTAGGGTAGTAGAGATGGCAGACCTCGCCACGGTGCGGGGCACCTaGGAGGTAGAGGTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: LGDGARLRLRVVEMADLATVRGT*EVEVAV
Trigger: CACTGCAACCTCTACCTCCCAGGTGCCCCGCACCGT...GGCGAGGTCTGCCATCTCTACTACCCTAAGTCGGAGTCTCGCTCCGTCGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473367.5
CDS-3UTR TCA 90 bp GAACAGGCCCCGAAGAAGCGCTCCCTGCTCAGGACGCGCCACCACATACTCATAGGTACTCTGGGAGTGTaGGCGGTGCTCTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: EQAPKKRSLLRTRHHILIGTLGV*AVLWAA
Trigger: AGCTGCCCAGAGCACCGCTCACACTCCCAGAGTACC...TATGAGTATGTGGTGGCGCGTCCTGAGCAGGGAGCGCTTCTTCGGGGCCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR TCA 90 bp TCCCACTCTATCCTGCTGCCTGCACGCGCCCCCTCCACATCCAGCAGGCCAGTCATAGCTTCCGCAGGCTaGAGGTGCCCGGTTTTGTGT +
Preference number: 4 (lower is better)
Translates to: SHSILLPARAPSTSSRPVIASAG*RCPVLC
Trigger: ACACAAAACCGGGCACCTTCAGCCTGCGGAAGCTAT...GACTGGCCTGCTGGATGTGGAGGGGGCGCGTGCAGGCAGCAGGATAGAGTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000233202.11
ENST00000354352.9
CDS-3UTR TCA 90 bp GGTTGGCTGGTCTCAGGAACTGTCCCACTCTATCCTGCTGCCTGCACGCGCCCCGCCACGGCGCCAGCCTaGAGATCTGACTCGATGTTT +
Preference number: 4 (lower is better)
Translates to: GWLVSGTVPLYPAACTRPATAPA*RSDSMF
Trigger: AAACATCGAGTCAGATCTTCAGGCTGGCGCCGTGGC...GGGGCGCGTGCAGGCAGCAGGATAGAGTGGGACAGTTCCTGAGACCAGCCAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233202.11
ENST00000354352.9
CDS-3UTR TCA 90 bp CGGGAGGCTGAAGTTGAGGCTGCAGCGAGCTGTGATGGCGCCATTGCACTCCAGACATGTTGGCTTCTCTaGTGTCTGCTCGGCGGGCCC +
Preference number: 4 (lower is better)
Translates to: REAEVEAAASCDGAIALQTCWLL*CLLGGP
Trigger: GGGCCCGCCGAGCAGACATCAGAGAAGCCAACATGT...CTGGAGTGCAATGGCGCCATCACAGCTCGCTGCAGCCTCAACTTCAGCCTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539932.5
CDS-3UTR TCA 90 bp GAAAGAAGTGCGCCGCCGTTTTACTGTCTGGAAAATGGGTTGCAGGCGGAACAGACAAGCGTCCGGACCTaGGCGCGGAGCCAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: ERSAPPFYCLENGLQAEQTSVRT*ARSQAA
Trigger: GGCGGCCTGGCTCCGCGCTCAGGTCCGGACGCTTGT...CTGTTCCGCCTGCAACCCATTTTCCAGACAGTAAAACGGCGGCGCACTTCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR TCA 90 bp GGCGACGGAGCGAGACTCCGACTTAGGGTAGTAGAGATGGCAGACCTCGCCCAAGCACCATTGCACTCCTaGCTGGGCGACGGAGCGAGA +
Preference number: 4 (lower is better)
Translates to: GDGARLRLRVVEMADLAQAPLHS*LGDGAR
Trigger: TCTCGCTCCGTCGCCCAGTCAGGAGTGCAATGGTGC...TTGGGCGAGGTCTGCCATCTCTACTACCCTAAGTCGGAGTCTCGCTCCGTCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473367.5
CDS-3UTR GCA 90 bp GGCGACGGAGCGAGACTCCGACTTAGGGTAGTAGAGATGGCAGACCTCGCCCAACCTCGCCCAAGTCCTTaGCTGTCACCACGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: GDGARLRLRVVEMADLAQPRPSP*LSPRPD
Trigger: GTCTGGGCGTGGTGACAGGCAAGGACTTGGGCGAGG...TTGGGCGAGGTCTGCCATCTCTACTACCCTAAGTCGGAGTCTCGCTCCGTCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473367.5
CDS-3UTR GCA 90 bp CACTATTTCAAGCTCCAGTTTGGAGCCTGTGTCCCGCCCAAGTCCTCAAGCCCTGGCGGGCGGCCCTCTTaGCCAGGTACCCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: HYFKLQFGACVPPKSSSPGGRPS*PGTLCS
Trigger: GCTGCAGAGGGTACCTGGGCAAGAGGGCCGCCCGCC...AGGGCTTGAGGACTTGGGCGGGACACAGGCTCCAAACTGGAGCTTGAAATAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CCA 90 bp CTGGGCGACGGAGCGAGACTCCGACTTAGGGTAGTAGAGATGGCAGACCTCGCCTGGTCGGGCTGGAGATaGAACCATAGCTGGACCCGC +
Preference number: 4 (lower is better)
Translates to: LGDGARLRLRVVEMADLAWSGWR*NHSWTR
Trigger: GCGGGTCCAGCTATGGTTCCATCTCCAGCCCGACCA...GGCGAGGTCTGCCATCTCTACTACCCTAAGTCGGAGTCTCGCTCCGTCGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473367.5
CDS-3UTR CCA 90 bp TGGTGGGAGCTGTGGGCCAGAAAGGTGGCTCCGTGGGCAAGGCAACAGGTCCAGTCAGGTAGGTCTCTCTaGGAGGTGCTTGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: WWELWARKVAPWARQQVQSGRSL*EVLAVA
Trigger: GGCCACAGCAAGCACCTCCCAGAGAGACCTACCTGA...CTGGACCTGTTGCCTTGCCCACGGAGCCACCTTTCTGGCCCACAGCTCCCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR CCA 90 bp GCGTGGGAGTCGCGGCCGCCGGCTCCCCTGAGGAAACAGCAAATAATTTGGGCCCAATGGCTAGCTCGATaGTCAGCCAGAGGACGGTGC +
Preference number: 4 (lower is better)
Translates to: AWESRPPAPLRKQQIIWAQWLAR*SARGRC
Trigger: GCACCGTCCTCTGGCTGACCATCGAGCTAGCCATTG...GGCCCAAATTATTTGCTGTTTCCTCAGGGGAGCCGGCGGCCGCGACTCCCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CCA 90 bp GATGTCTGCTCGGCGGGCCCGGTCTATCTCTCGAGACTTGACCAGGGCCGAGTGCAATGGCTAGCTCGATaGTCAGCCAGAGGACGGTGC +
Preference number: 4 (lower is better)
Translates to: DVCSAGPVYLSRLDQGRVQWLAR*SARGRC
Trigger: GCACCGTCCTCTGGCTGACCATCGAGCTAGCCATTG...CACTCGGCCCTGGTCAAGTCTCGAGAGATAGACCGGGCCCGCCGAGCAGACATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR CCA 90 bp GTCCCCCATCCATCTCCTCCTTCAGCTGGCATGGACCCATCTTCTCCAGTGCCACAAATTAGCTGGGCGTaGTGGCGCGCGCCACTCCCG +
Preference number: 4 (lower is better)
Translates to: VPHPSPPSAGMDPSSPVPQISWA*WRAPLP
Trigger: CGGGAGTGGCGCGCGCCACCACGCCCAGCTAATTTG...TGGCACTGGAGAAGATGGGTCCATGCCAGCTGAAGGAGGAGATGGATGGGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR CAA 72 bp AGCACGGCGAACGGGAGCAGCAGGCTCTGCAGCACGTaGAGCAGATCATTGAGGCCCGACAAGTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: STANGSSRLCST*SRSLRPDKSLR
Trigger: CCTGAGGGACTTGTCGGGCCTCAATGATCTGCTCAACGTGCTGCAGAGCCTGCTGCTCCCGTTCGCCGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR TCA 90 bp GACGGAGCGAGACTCCGACTTAGGGTAGTAGAGATGGCAGACCTCGCCCAAGTCGGTACTCTGGGAGTGTaGGCGGTGCTCTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: DGARLRLRVVEMADLAQVGTLGV*AVLWAA
Trigger: AGCTGCCCAGAGCACCGCTCACACTCCCAGAGTACC...GACTTGGGCGAGGTCTGCCATCTCTACTACCCTAAGTCGGAGTCTCGCTCCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473367.5
CDS-3UTR TCA 90 bp GGCCTAGCCAGAGGTCTCCCCTTTCTGGTCCTCTTCAAGGAGCCCATACAGGAAGGAAGCCAGGCCCCGTaGAGGCCCATAGCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: GLARGLPFLVLFKEPIQEGSQAP*RPIASA
Trigger: TGCGGAAGCTATGGGCCTTCACGGGGCCTGGCTTCC...TTCCTGTATGGGCTCCTTGAAGAGGACCAGAAAGGGGAGACCTCTGGCTAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR TCA 90 bp CTGGGCGACGGAGCGAGACTCCGACTTAGGGTAGTAGAGATGGCAGACCTCGCCGCCACGGCGCCAGCCTaGAGATCTGACTCGATGTTT +
Preference number: 4 (lower is better)
Translates to: LGDGARLRLRVVEMADLAATAPA*RSDSMF
Trigger: AAACATCGAGTCAGATCTTCAGGCTGGCGCCGTGGC...GGCGAGGTCTGCCATCTCTACTACCCTAAGTCGGAGTCTCGCTCCGTCGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473367.5
CDS-3UTR TCA 90 bp CCTGCATGTCGGAGCCCACAATGGCTAGCTCGATGGTCAGCCAGAGGACGGTGCGCCACGGCGCCAGCCTaGAGATCTGACTCGATGTTT +
Preference number: 4 (lower is better)
Translates to: PACRSPQWLARWSARGRCATAPA*RSDSMF
Trigger: AAACATCGAGTCAGATCTTCAGGCTGGCGCCGTGGC...GCACCGTCCTCTGGCTGACCATCGAGCTAGCCATTGTGGGCTCCGACATGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539932.5
CDS-3UTR TCA 90 bp TGGCTGGTCTCAGGAACTGTCCCACTCTATCCTGCTGCCTGCACGCGCCCCCTCCAGCTGAGAGCAGATTaGATGCAATGGCCGTGCCGA +
Preference number: 4 (lower is better)
Translates to: WLVSGTVPLYPAACTRPLQLRAD*MQWPCR
Trigger: TCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTG...GAGGGGGCGCGTGCAGGCAGCAGGATAGAGTGGGACAGTTCCTGAGACCAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000233202.11
ENST00000354352.9
CDS-3UTR TCA 90 bp GAAAGAAGTGCGCCGCCGTTTTACTGTCTGGAAAATGGGTTGCAGGCGGAACAGTGGCGCAGGAGCGGGTaGGGAGGACACGGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: ERSAPPFYCLENGLQAEQWRRSG*GGHGRS
Trigger: GCTTCGCCCGTGTCCTCCTCACCCGCTCCTGCGCCA...CTGTTCCGCCTGCAACCCATTTTCCAGACAGTAAAACGGCGGCGCACTTCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR GCA 90 bp GATGTCTGCTCGGCGGGCCCGGTCTATCTCTCGAGACTTGACCAGGGCCGAGTGGTGCCGATGACTTCCTaGATGTCGGAGCCCACAATG +
Preference number: 4 (lower is better)
Translates to: DVCSAGPVYLSRLDQGRVVPMTS*MSEPTM
Trigger: CATTGTGGGCTCCGACATGCAGGAAGTCATCGGCAC...CACTCGGCCCTGGTCAAGTCTCGAGAGATAGACCGGGCCCGCCGAGCAGACATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR GCA 90 bp TTGTGGGGCATGATGATGGCGCCAACAATGCCCACCGCCTGCAGCAGCTCGGGGCTGGGAGGTAGAGGTTaGAGTGAGCTGACATCGCAC +
Preference number: 4 (lower is better)
Translates to: LWGMMMAPTMPTACSSSGLGGRG*SELTSH
Trigger: GTGCGATGTCAGCTCACTGCAACCTCTACCTCCCAG...CCCCGAGCTGCTGCAGGCGGTGGGCATTGTTGGCGCCATCATCATGCCCCACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR GCA 90 bp GAGCAGATTGAATGCAATGGCCGTGCCGATGACTTCCTGCATGTCGGAGCCCACCCAGGAGGTGGAGGTTaGGGTGAGCCGGAGATCGCG +
Preference number: 4 (lower is better)
Translates to: EQIECNGRADDFLHVGAHPGGGG*GEPEIA
Trigger: CGCGATCTCCGGCTCACCGCAACCTCCACCTCCTGG...GTGGGCTCCGACATGCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539932.5
CDS-3UTR CCA 90 bp CTGGGCGACGGAGCGAGACTCCGACTTAGGGTAGTAGAGATGGCAGACCTCGCCCCTGCACCCCCTCTCTaGGCACTGGTGCAAGTAAGT +
Preference number: 4 (lower is better)
Translates to: LGDGARLRLRVVEMADLAPAPPL*ALVQVS
Trigger: ACTTACTTGCACCAGTGCCCAGAGAGGGGGTGCAGG...GGCGAGGTCTGCCATCTCTACTACCCTAAGTCGGAGTCTCGCTCCGTCGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473367.5
CDS-3UTR CCA 90 bp GAAGCGCTCCCTGCTCAGGACGCGCCACCACATACTCATAGCCAAAGGTCAAGGCGTGCAGCCAGTCGCTaGCAGAGCAAGCCCAACACG +
Preference number: 4 (lower is better)
Translates to: EALPAQDAPPHTHSQRSRRAASR*QSKPNT
Trigger: CGTGTTGGGCTTGCTCTGCCAGCGACTGGCTGCACG...CCTTGACCTTTGGCTATGAGTATGTGGTGGCGCGTCCTGAGCAGGGAGCGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR CCA 90 bp GACGGAGCGAGACTCCGACTTAGGGTAGTAGAGATGGCAGACCTCGCCCAAGTCCGTGCAGCCAGTCGCTaGCAGAGCAAGCCCAACACG +
Preference number: 4 (lower is better)
Translates to: DGARLRLRVVEMADLAQVRAASR*QSKPNT
Trigger: CGTGTTGGGCTTGCTCTGCCAGCGACTGGCTGCACG...GACTTGGGCGAGGTCTGCCATCTCTACTACCCTAAGTCGGAGTCTCGCTCCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473367.5
CDS-3UTR CCA 90 bp GCCCCCTCCACATCCAGCAGGCCAGTCACGTCATACATGCCACTCCCAGCCAGGCGGACAGGGCGATGGTaGCCTCAATCAGGAAGTACA +
Preference number: 4 (lower is better)
Translates to: APSTSSRPVTSYMPLPARRTGRW*PQSGST
Trigger: TGTACTTCCTGATTGAGGCCACCATCGCCCTGTCCG...CCTGGCTGGGAGTGGCATGTATGACGTGACTGGCCTGCTGGATGTGGAGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000233202.11
ENST00000354352.9
CDS-3UTR CCA 90 bp TTGTGGGGCATGATGATGGCGCCAACAATGCCCACCGCCTGCAGCAGCTCGGGGAGACGGACAGGGCGATaGTGGCCTCAATCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: LWGMMMAPTMPTACSSSGRRTGR*WPQSGS
Trigger: ACTTCCTGATTGAGGCCACCATCGCCCTGTCCGTCT...CCCCGAGCTGCTGCAGGCGGTGGGCATTGTTGGCGCCATCATCATGCCCCACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR CCA 90 bp CGAGTGCAGGTAGATGTTGTGGGGCATGATGATGGCGCCAACAATGCCCACCGCCCGCCAGGAGACCTATaGCCCAGATGTAGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: RVQVDVVGHDDGANNAHRPPGDL*PRCRGP
Trigger: CGGCCCTCTACATCTGGGCCATAGGTCTCCTGGCGG...GCGGTGGGCATTGTTGGCGCCATCATCATGCCCCACAACATCTACCTGCACTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR CCA 90 bp CCACCCCAGAGTGGGATTCGTCCAGCTGAGAGCAGATTGAATGCAATGGCCGTGAGGTGCCCGTCATGGTaGAGCTCTGCCCAGCCGCCA +
Preference number: 4 (lower is better)
Translates to: PPQSGIRPAESRLNAMAVRCPSW*SSAQPP
Trigger: TGGCGGCTGGGCAGAGCTCCACCATGACGGGCACCT...CACGGCCATTGCATTCAATCTGCTCTCAGCTGGACGAATCCCACTCTGGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR CCA 90 bp CGGAGAAAGAAGTGCGCCGCCGTTTTACTGTCTGGAAAATGGGTTGCAGGCGGACAGCCACGAGCACGGTaGGCAGGATGGCGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: RRKKCAAVLLSGKWVAGGQPRAR*AGWRRS
Trigger: GCTCCTGCGCCATCCTGCCCACCGTGCTCGTGGCTG...TCCGCCTGCAACCCATTTTCCAGACAGTAAAACGGCGGCGCACTTCTTTCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CCA 90 bp GGTTGGCTGGTCTCAGGAACTGTCCCACTCTATCCTGCTGCCTGCACGCGCCCCTACAGGAAGTGGTGGTaGGAGCTGTGGGCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: GWLVSGTVPLYPAACTRPYRKWW*ELWARK
Trigger: CTTTCTGGCCCACAGCTCCCACCACCACTTCCTGTA...GGGGCGCGTGCAGGCAGCAGGATAGAGTGGGACAGTTCCTGAGACCAGCCAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233202.11
ENST00000354352.9
CDS-3UTR CCA 90 bp GCCCCCTCCACATCCAGCAGGCCAGTCACGTCATACATGCCACTCCCAGCCAGGGAGGTCTCCCCTTTCTaGTCCTCTTCAAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: APSTSSRPVTSYMPLPAREVSPF*SSSRSP
Trigger: TGGGCTCCTTGAAGAGGACCAGAAAGGGGAGACCTC...CCTGGCTGGGAGTGGCATGTATGACGTGACTGGCCTGCTGGATGTGGAGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000233202.11
ENST00000354352.9
CDS-3UTR CCA 90 bp TTGTGGGGCATGATGATGGCGCCAACAATGCCCACCGCCTGCAGCAGCTCGGGGGAGGTCTCCCCTTTCTaGTCCTCTTCAAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LWGMMMAPTMPTACSSSGEVSPF*SSSRSP
Trigger: TGGGCTCCTTGAAGAGGACCAGAAAGGGGAGACCTC...CCCCGAGCTGCTGCAGGCGGTGGGCATTGTTGGCGCCATCATCATGCCCCACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR TCA 90 bp ACAAAGAGGTTGATGATAAAGGAGACGGACAGGGCGATGGTGGCCTCAATCAGGTGGCGCAGGAGCGGGTaGGGAGGACACGGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: TKRLMIKETDRAMVASIRWRRSG*GGHGRS
Trigger: GCTTCGCCCGTGTCCTCCTCACCCGCTCCTGCGCCA...CCTGATTGAGGCCACCATCGCCCTGTCCGTCTCCTTTATCATCAACCTCTTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR TCA 90 bp GGGATTCGTCCAGCTGAGAGCAGATTGAATGCAATGGCCGTGCCGATGACTTCCAGACCAGGTAGGTGCTaGGGCCCAGGTAGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: GIRPAESRLNAMAVPMTSRPGRC*GPGRLR
Trigger: CCGCAGCCTACCTGGGCCTCAGCACCTACCTGGTCT...GGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGGACGAATCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR TCA 90 bp GGTCGCACCAGACCGGTCCCATCTCTTCTCTCCTTGAGGGACCCACTCGCATCGCATCTCTTCTCTCCTTaGGGGACCCACTCGCATCGT +
Preference number: 4 (lower is better)
Translates to: GRTRPVPSLLSLRDPLASHLFSP*GTHSHR
Trigger: ACGATGCGAGTGGGTCCCTCAAGGAGAGAAGAGATG...CGATGCGAGTGGGTCCCTCAAGGAGAGAAGAGATGGGACCGGTCTGGTGCGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR GCA 90 bp GGCCTAGCCAGAGGTCTCCCCTTTCTGGTCCTCTTCAAGGAGCCCATACAGGAATGGGAGTGTGAGCGGTaGTCTGGGCAGCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GLARGLPFLVLFKEPIQEWECER*SGQLLS
Trigger: GCTGAGGAGCTGCCCAGAGCACCGCTCACACTCCCA...TTCCTGTATGGGCTCCTTGAAGAGGACCAGAAAGGGGAGACCTCTGGCTAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR GCA 90 bp GAGCAGATTGAATGCAATGGCCGTGCCGATGACTTCCTGCATGTCGGAGCCCACTGGGAGTGTGAGCGGTaGTCTGGGCAGCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: EQIECNGRADDFLHVGAHWECER*SGQLLS
Trigger: GCTGAGGAGCTGCCCAGAGCACCGCTCACACTCCCA...GTGGGCTCCGACATGCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354352.9
ENST00000481524.5
ENST00000539932.5
CDS-3UTR GCA 90 bp GGCATGATGATGGCGCCAACAATGCCCACCGCCTGCAGCAGCTCGGGGTGGCCGCACCTGTCATTGAAATaGCGACTTCAGGTACTCTGG +
Preference number: 4 (lower is better)
Translates to: GMMMAPTMPTACSSSGWPHLSLK*RLQVLW
Trigger: CCAGAGTACCTGAAGTCGGCATTTCAATGACAGGTG...CGGCCACCCCGAGCTGCTGCAGGCGGTGGGCATTGTTGGCGCCATCATCATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR GCA 90 bp AAACCCAGAGGAGGCGGGCGGCCCTCTTGCCCAGGTACCCTCTGCAGCGCTTGCCCAGAAGGTGGAGGTTaGAATGAGTTAAGATTGCGC +
Preference number: 4 (lower is better)
Translates to: KPRGGGRPSCPGTLCSACPEGGG*NELRLR
Trigger: GCGCAATCTTAACTCATTGCAACCTCCACCTTCTGG...GCAAGCGCTGCAGAGGGTACCTGGGCAAGAGGGCCGCCCGCCTCCTCTGGGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR GCA 90 bp GTCTGGAAAATGGGTTGCAGGCGGAACAGAAAGGCTGCGGCGAATAGGAGCGGAGGGGGTTCTTCCAGGTaGAACACCCGGCCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: VWKMGCRRNRKAAANRSGGGSSR*NTRPRF
Trigger: GAACCTGGGCCGGGTGTTGCACCTGGAAGAACCCCC...TCCGCTCCTATTCGCCGCAGCCTTTCTGTTCCGCCTGCAACCCATTTTCCAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR GCA 90 bp GTGCCAAACCCAGAGGAGGCGGGCGGCCCTCTTGCCCAGGTACCCTCTGCAGCGACCCACTCGCATCGTTaGCCTTTTAAGAAAGAGGAA +
Preference number: 4 (lower is better)
Translates to: VPNPEEAGGPLAQVPSAATHSHR*PFKKEE
Trigger: TTCCTCTTTCTTAAAAGGGCAACGATGCGAGTGGGT...CGCTGCAGAGGGTACCTGGGCAAGAGGGCCGCCCGCCTCCTCTGGGTTTGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR GCA 90 bp CACTATTTCAAGCTCCAGTTTGGAGCCTGTGTCCCGCCCAAGTCCTCAAGCCCTACCCTCTGCAGCGCTTaGCCAGGTCGCACCAGACCG +
Preference number: 4 (lower is better)
Translates to: HYFKLQFGACVPPKSSSPTLCSA*PGRTRP
Trigger: CGGTCTGGTGCGACCTGGGCAAGCGCTGCAGAGGGT...AGGGCTTGAGGACTTGGGCGGGACACAGGCTCCAAACTGGAGCTTGAAATAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR GCA 90 bp GGCGACGGAGCGAGACTCCGACTTAGGGTAGTAGAGATGGCAGACCTCGCCCAACTGACATCGCACCATTaGACTCCTGACTGGGCGACG +
Preference number: 4 (lower is better)
Translates to: GDGARLRLRVVEMADLAQLTSHH*TPDWAT
Trigger: CGTCGCCCAGTCAGGAGTGCAATGGTGCGATGTCAG...TTGGGCGAGGTCTGCCATCTCTACTACCCTAAGTCGGAGTCTCGCTCCGTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473367.5
CDS-3UTR GCA 90 bp CTGGGCGACGGAGCGAGACTCCGACTTAGGGTAGTAGAGATGGCAGACCTCGCCCGCAGCCGAGTGCCCTaGCTCTTACATCAACATTCG +
Preference number: 4 (lower is better)
Translates to: LGDGARLRLRVVEMADLARSRVP*LLHQHS
Trigger: CGAATGTTGATGTAAGAGGCAGGGCACTCGGCTGCG...GGCGAGGTCTGCCATCTCTACTACCCTAAGTCGGAGTCTCGCTCCGTCGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473367.5
CDS-3UTR GCA 90 bp GGCGACGGAGCGAGACTCCGACTTAGGGTAGTAGAGATGGCAGACCTCGCCCAACCATCCGCAGCCGAGTaGCCTGCCTCTTACATCAAC +
Preference number: 4 (lower is better)
Translates to: GDGARLRLRVVEMADLAQPSAAE*PASYIN
Trigger: GTTGATGTAAGAGGCAGGGCACTCGGCTGCGGATGG...TTGGGCGAGGTCTGCCATCTCTACTACCCTAAGTCGGAGTCTCGCTCCGTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473367.5
CDS-3UTR CCA 90 bp TTGTGGGGCATGATGATGGCGCCAACAATGCCCACCGCCTGCAGCAGCTCGGGGAGATGGAACCATAGCTaGACCCGCTTAGCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: LWGMMMAPTMPTACSSSGRWNHS*TRLAFG
Trigger: CCCAAAGGCTAAGCGGGTCCAGCTATGGTTCCATCT...CCCCGAGCTGCTGCAGGCGGTGGGCATTGTTGGCGCCATCATCATGCCCCACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR CCA 90 bp CCGCAGCCCGTAGTTATCGAGGAAGAGGAAGAAGAAGGTGTCCACGATGGTGATGGGAGGTGCTTGCTGTaGCCCTGGGCTGGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: PQPVVIEEEEEEGVHDGDGRCLL*PWAGRA
Trigger: AGCCCGACCAGCCCAGGGCCACAGCAAGCACCTCCC...ATCACCATCGTGGACACCTTCTTCTTCCTCTTCCTCGATAACTACGGGCTGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR CCA 90 bp GGCGACGGAGCGAGACTCCGACTTAGGGTAGTAGAGATGGCAGACCTCGCCCAATCAGGTAGGTCTCTCTaGGAGGTGCTTGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: GDGARLRLRVVEMADLAQSGRSL*EVLAVA
Trigger: GGCCACAGCAAGCACCTCCCAGAGAGACCTACCTGA...TTGGGCGAGGTCTGCCATCTCTACTACCCTAAGTCGGAGTCTCGCTCCGTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473367.5
CDS-3UTR CCA 90 bp GATGTCTGCTCGGCGGGCCCGGTCTATCTCTCGAGACTTGACCAGGGCCGAGTGGCCCGGTTTTGTGTCTaGGATGGGGATCTTCTCACT +
Preference number: 4 (lower is better)
Translates to: DVCSAGPVYLSRLDQGRVARFCV*DGDLLT
Trigger: AGTGAGAAGATCCCCATCCCAGACACAAAACCGGGC...CACTCGGCCCTGGTCAAGTCTCGAGAGATAGACCGGGCCCGCCGAGCAGACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR CCA 90 bp GGTCGCACCAGACCGGTCCCATCTCTTCTCTCCTTGAGGGACCCACTCGCATCGAGACGGACAGGGCGATaGTGGCCTCAATCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: GRTRPVPSLLSLRDPLASRRTGR*WPQSGS
Trigger: ACTTCCTGATTGAGGCCACCATCGCCCTGTCCGTCT...CGATGCGAGTGGGTCCCTCAAGGAGAGAAGAGATGGGACCGGTCTGGTGCGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CCA 90 bp CCCCAGGAAATCGGGGGTTCTTCCAGGTGCAACACCCGGCCCAGGTTCAACTCTTGTCCACGGCCACGGTaGCGTTGTTCATGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: PQEIGGSSRCNTRPRFNSCPRPR*RCSWGR
Trigger: TCTTCCCCATGAACAACGCCACCGTGGCCGTGGACA...AGAGTTGAACCTGGGCCGGGTGTTGCACCTGGAAGAACCCCCGATTTCCTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CCA 90 bp TTCTCTGATGTCTGCTCGGCGGGCCCGGTCTATCTCTCGAGACTTGACCAGGGCAGAAAGGTGGCTCCGTaGGCAAGGCAACAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: FSDVCSAGPVYLSRLDQGRKVAP*ARQQVQ
Trigger: CTGGACCTGTTGCCTTGCCCACGGAGCCACCTTTCT...GCCCTGGTCAAGTCTCGAGAGATAGACCGGGCCCGCCGAGCAGACATCAGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR CCA 90 bp GGTCGCACCAGACCGGTCCCATCTCTTCTCTCCTTGAGGGACCCACTCGCATCGTACAGGAAGTGGTGGTaGGAGCTGTGGGCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: GRTRPVPSLLSLRDPLASYRKWW*ELWARK
Trigger: CTTTCTGGCCCACAGCTCCCACCACCACTTCCTGTA...CGATGCGAGTGGGTCCCTCAAGGAGAGAAGAGATGGGACCGGTCTGGTGCGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CCA 90 bp TGGCTGGTCTCAGGAACTGTCCCACTCTATCCTGCTGCCTGCACGCGCCCCCTCTTTCAAGCTCCAGTTTaGAGCCTGTGTCCCGCCCAA +
Preference number: 4 (lower is better)
Translates to: WLVSGTVPLYPAACTRPLFQAPV*SLCPAQ
Trigger: TTGGGCGGGACACAGGCTCCAAACTGGAGCTTGAAA...GAGGGGGCGCGTGCAGGCAGCAGGATAGAGTGGGACAGTTCCTGAGACCAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CCA 90 bp AGGCCGCCTGCCCTGCTGGGTCCCCAGGAAATCGGGGGTTCTTCCAGGTGCAACAGAGGCACAGACTCTTaGGTTCCTTATGACCTGGTG +
Preference number: 4 (lower is better)
Translates to: RPPALLGPQEIGGSSRCNRGTDS*VPYDLV
Trigger: CACCAGGTCATAAGGAACCCAAGAGTCTGTGCCTCT...GTTGCACCTGGAAGAACCCCCGATTTCCTGGGGACCCAGCAGGGCAGGCGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CCA 90 bp CGTTTTACTGTCTGGAAAATGGGTTGCAGGCGGAACAGAAAGGCTGCGGCGAATCTCCCCGAAGGATTCTaGGGCCCCTGGCGCGAGCCC +
Preference number: 4 (lower is better)
Translates to: RFTVWKMGCRRNRKAAANLPEGF*GPWREP
Trigger: GGGCTCGCGCCAGGGGCCCCAGAATCCTTCGGGGAG...ATTCGCCGCAGCCTTTCTGTTCCGCCTGCAACCCATTTTCCAGACAGTAAAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR TCA 90 bp GGGATTCGTCCAGCTGAGAGCAGATTGAATGCAATGGCCGTGCCGATGACTTCCGGTACTCTGGGAGTGTaGGCGGTGCTCTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GIRPAESRLNAMAVPMTSGTLGV*AVLWAA
Trigger: AGCTGCCCAGAGCACCGCTCACACTCCCAGAGTACC...GGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGGACGAATCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354352.9
ENST00000481524.5
ENST00000539932.5
CDS-3UTR TCA 90 bp AGTGGGATTCGTCCAGCTGAGAGCAGATTGAATGCAATGGCCGTGCCGATGACTGGAAGCCAGGCCCCGTaGAGGCCCATAGCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: SGIRPAESRLNAMAVPMTGSQAP*RPIASA
Trigger: TGCGGAAGCTATGGGCCTTCACGGGGCCTGGCTTCC...AGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGGACGAATCCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR TCA 90 bp CCCCAGGAAATCGGGGGTTCTTCCAGGTGCAACACCCGGCCCAGGTTCAACTCTGCCAGCCTGAAGATCTaGCTCGATGTTTCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: PQEIGGSSRCNTRPRFNSASLKI*LDVSWV
Trigger: GACCCAGGAAACATCGAGTCAGATCTTCAGGCTGGC...AGAGTTGAACCTGGGCCGGGTGTTGCACCTGGAAGAACCCCCGATTTCCTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR TCA 90 bp GAACAGGCCCCGAAGAAGCGCTCCCTGCTCAGGACGCGCCACCACATACTCATAGCCAGCCTGAAGATCTaGCTCGATGTTTCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: EQAPKKRSLLRTRHHILIASLKI*LDVSWV
Trigger: GACCCAGGAAACATCGAGTCAGATCTTCAGGCTGGC...TATGAGTATGTGGTGGCGCGTCCTGAGCAGGGAGCGCTTCTTCGGGGCCTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR TCA 90 bp AGGCCGCCTGCCCTGCTGGGTCCCCAGGAAATCGGGGGTTCTTCCAGGTGCAACTGGGATTCGTCCAGCTaGGAGCAGATTGAATGCAAT +
Preference number: 4 (lower is better)
Translates to: RPPALLGPQEIGGSSRCNWDSSS*EQIECN
Trigger: ATTGCATTCAATCTGCTCTCAGCTGGACGAATCCCA...GTTGCACCTGGAAGAACCCCCGATTTCCTGGGGACCCAGCAGGGCAGGCGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR TCA 90 bp CCGCAGCCCGTAGTTATCGAGGAAGAGGAAGAAGAAGGTGTCCACGATGGTGATGACACGGGCGAAGCGTaGCCACCGCAGCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: PQPVVIEEEEEEGVHDGDDTGEA*PPQPQE
Trigger: TTCCTGAGGCTGCGGTGGTCACGCTTCGCCCGTGTC...ATCACCATCGTGGACACCTTCTTCTTCCTCTTCCTCGATAACTACGGGCTGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR TCA 90 bp CGTCCAGCTGAGAGCAGATTGAATGCAATGGCCGTGCCGATGACTTCCTGCATGGCACCATTGCACTCCTaGCTGGGCGACGGAGCGAGA +
Preference number: 4 (lower is better)
Translates to: RPAESRLNAMAVPMTSCMAPLHS*LGDGAR
Trigger: TCTCGCTCCGTCGCCCAGTCAGGAGTGCAATGGTGC...CATGCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR TCA 90 bp ATTGAATGCAATGGCCGTGCCGATGACTTCCTGCATGTCGGAGCCCACAATGGCGGAGGGCAGATCACCTaGGGCTGGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: IECNGRADDFLHVGAHNGGGQIT*GWEFET
Trigger: GGTCTCGAACTCCCAGCCTCAGGTGATCTGCCCTCC...GCCATTGTGGGCTCCGACATGCAGGAAGTCATCGGCACGGCCATTGCATTCAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539932.5
CDS-3UTR GCA 90 bp CACTATTTCAAGCTCCAGTTTGGAGCCTGTGTCCCGCCCAAGTCCTCAAGCCCTCCTCGCCCAAGTCCTTaGCTGTCACCACGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: HYFKLQFGACVPPKSSSPPRPSP*LSPRPD
Trigger: GTCTGGGCGTGGTGACAGGCAAGGACTTGGGCGAGG...AGGGCTTGAGGACTTGGGCGGGACACAGGCTCCAAACTGGAGCTTGAAATAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR GCA 90 bp CGTCCAGCTGAGAGCAGATTGAATGCAATGGCCGTGCCGATGACTTCCTGCATGCCTCGCCCAAGTCCTTaGCTGTCACCACGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: RPAESRLNAMAVPMTSCMPRPSP*LSPRPD
Trigger: GTCTGGGCGTGGTGACAGGCAAGGACTTGGGCGAGG...CATGCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354352.9
ENST00000481524.5
ENST00000539932.5
CDS-3UTR GCA 90 bp GCTGAGAGCAGATTGAATGCAATGGCCGTGCCGATGACTTCCTGCATGTCGGAGCCTCGCCCAAGTCCTTaGCTGTCACCACGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: AESRLNAMAVPMTSCMSEPRPSP*LSPRPD
Trigger: GTCTGGGCGTGGTGACAGGCAAGGACTTGGGCGAGG...CTCCGACATGCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354352.9
ENST00000481524.5
ENST00000539932.5
CDS-3UTR GCA 90 bp ACAAAGAGGTTGATGATAAAGGAGACGGACAGGGCGATGGTGGCCTCAATCAGGACAATGCCCACCGCCTaGAGCAGCTCGGGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: TKRLMIKETDRAMVASIRTMPTA*SSSGWP
Trigger: CGGCCACCCCGAGCTGCTGCAGGCGGTGGGCATTGT...CCTGATTGAGGCCACCATCGCCCTGTCCGTCTCCTTTATCATCAACCTCTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR GCA 90 bp GGTTGGCTGGTCTCAGGAACTGTCCCACTCTATCCTGCTGCCTGCACGCGCCCCTTAAGATTGCGCCACTaGACTCCAGCCTTGGCAACA +
Preference number: 4 (lower is better)
Translates to: GWLVSGTVPLYPAACTRPLRLRH*TPALAT
Trigger: TGTTGCCAAGGCTGGAGTGCAGTGGCGCAATCTTAA...GGGGCGCGTGCAGGCAGCAGGATAGAGTGGGACAGTTCCTGAGACCAGCCAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CCA 90 bp GTGCCGATGACTTCCTGCATGTCGGAGCCCACAATGGCTAGCTCGATGGTCAGCCCTGCACCCCCTCTCTaGGCACTGGTGCAAGTAAGT +
Preference number: 4 (lower is better)
Translates to: VPMTSCMSEPTMASSMVSPAPPL*ALVQVS
Trigger: ACTTACTTGCACCAGTGCCCAGAGAGGGGGTGCAGG...GCTGACCATCGAGCTAGCCATTGTGGGCTCCGACATGCAGGAAGTCATCGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000481524.5
ENST00000539932.5
CDS-3UTR CCA 90 bp GGCGACGGAGCGAGACTCCGACTTAGGGTAGTAGAGATGGCAGACCTCGCCCAACGACTTCAGGTACTCTaGGAGTGTGAGCGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: GDGARLRLRVVEMADLAQRLQVL*ECERCS
Trigger: AGAGCACCGCTCACACTCCCAGAGTACCTGAAGTCG...TTGGGCGAGGTCTGCCATCTCTACTACCCTAAGTCGGAGTCTCGCTCCGTCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473367.5
CDS-3UTR CCA 90 bp GACGGAGCGAGACTCCGACTTAGGGTAGTAGAGATGGCAGACCTCGCCCAAGTCGACCCGCTTAGCCTTTaGGGACCCTTGTCACCTGTC +
Preference number: 4 (lower is better)
Translates to: DGARLRLRVVEMADLAQVDPLSL*GPLSPV
Trigger: GACAGGTGACAAGGGTCCCCAAAGGCTAAGCGGGTC...GACTTGGGCGAGGTCTGCCATCTCTACTACCCTAAGTCGGAGTCTCGCTCCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473367.5
CDS-3UTR CCA 90 bp CTGGGCGACGGAGCGAGACTCCGACTTAGGGTAGTAGAGATGGCAGACCTCGCCAGATGGAACCATAGCTaGACCCGCTTAGCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: LGDGARLRLRVVEMADLARWNHS*TRLAFG
Trigger: CCCAAAGGCTAAGCGGGTCCAGCTATGGTTCCATCT...GGCGAGGTCTGCCATCTCTACTACCCTAAGTCGGAGTCTCGCTCCGTCGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473367.5
CDS-3UTR CCA 90 bp ATCAGGAAGTACATGTTGGCTTCTCTGATGTCTGCTCGGCGGGCCCGGTCTATCCGTGCAGCCAGTCGCTaGCAGAGCAAGCCCAACACG +
Preference number: 4 (lower is better)
Translates to: IRKYMLASLMSARRARSIRAASR*QSKPNT
Trigger: CGTGTTGGGCTTGCTCTGCCAGCGACTGGCTGCACG...GATAGACCGGGCCCGCCGAGCAGACATCAGAGAAGCCAACATGTACTTCCTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR CCA 90 bp CGAGTGCAGGTAGATGTTGTGGGGCATGATGATGGCGCCAACAATGCCCACCGCCAATGGCTAGCTCGATaGTCAGCCAGAGGACGGTGC +
Preference number: 4 (lower is better)
Translates to: RVQVDVVGHDDGANNAHRQWLAR*SARGRC
Trigger: GCACCGTCCTCTGGCTGACCATCGAGCTAGCCATTG...GCGGTGGGCATTGTTGGCGCCATCATCATGCCCCACAACATCTACCTGCACTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR CCA 90 bp GTCCCCCATCCATCTCCTCCTTCAGCTGGCATGGACCCATCTTCTCCAGTGCCATGTCGGAGCCCACAATaGCTAGCTCGATGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: VPHPSPPSAGMDPSSPVPCRSPQ*LARWSA
Trigger: GGCTGACCATCGAGCTAGCCATTGTGGGCTCCGACA...TGGCACTGGAGAAGATGGGTCCATGCCAGCTGAAGGAGGAGATGGATGGGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CCA 90 bp CCTGCATGTCGGAGCCCACAATGGCTAGCTCGATGGTCAGCCAGAGGACGGTGCCGGTGGCGTTGTTCATaGGGAAGATCTTGGCGTAGT +
Preference number: 4 (lower is better)
Translates to: PACRSPQWLARWSARGRCRWRCS*GRSWRS
Trigger: ACTACGCCAAGATCTTCCCCATGAACAACGCCACCG...GCACCGTCCTCTGGCTGACCATCGAGCTAGCCATTGTGGGCTCCGACATGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539932.5
CDS-3UTR CCA 90 bp GGCGATGGTGGCCTCAATCAGGAAGTACATGTTGGCTTCTCTGATGTCTGCTCGAGGTGCCCGTCATGGTaGAGCTCTGCCCAGCCGCCA +
Preference number: 4 (lower is better)
Translates to: GDGGLNQEVHVGFSDVCSRCPSW*SSAQPP
Trigger: TGGCGGCTGGGCAGAGCTCCACCATGACGGGCACCT...CGAGCAGACATCAGAGAAGCCAACATGTACTTCCTGATTGAGGCCACCATCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR TCA 90 bp GTCCCCCATCCATCTCCTCCTTCAGCTGGCATGGACCCATCTTCTCCAGTGCCAATAGCTTCCGCAGGCTaGAGGTGCCCGGTTTTGTGT +
Preference number: 4 (lower is better)
Translates to: VPHPSPPSAGMDPSSPVPIASAG*RCPVLC
Trigger: ACACAAAACCGGGCACCTTCAGCCTGCGGAAGCTAT...TGGCACTGGAGAAGATGGGTCCATGCCAGCTGAAGGAGGAGATGGATGGGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR TCA 90 bp GAGCAGATTGAATGCAATGGCCGTGCCGATGACTTCCTGCATGTCGGAGCCCACGCCACGGCGCCAGCCTaGAGATCTGACTCGATGTTT +
Preference number: 4 (lower is better)
Translates to: EQIECNGRADDFLHVGAHATAPA*RSDSMF
Trigger: AAACATCGAGTCAGATCTTCAGGCTGGCGCCGTGGC...GTGGGCTCCGACATGCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR TCA 90 bp AGACCCTGGTGTAGGGGTCTTCTGGATGCTTTAGAGACTTCGTGCCTTCCCGGTCAATGGCCGTGCCGATaGCTTCCTGCATGTCGGAGC +
Preference number: 4 (lower is better)
Translates to: RPWCRGLLDALETSCLPGQWPCR*LPACRS
Trigger: GCTCCGACATGCAGGAAGTCATCGGCACGGCCATTG...ACCGGGAAGGCACGAAGTCTCTAAAGCATCCAGAAGACCCCTACACCAGGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR TCA 90 bp CGTCCAGCTGAGAGCAGATTGAATGCAATGGCCGTGCCGATGACTTCCTGCATGCAATGGCCGTGCCGATaGCTTCCTGCATGTCGGAGC +
Preference number: 4 (lower is better)
Translates to: RPAESRLNAMAVPMTSCMQWPCR*LPACRS
Trigger: GCTCCGACATGCAGGAAGTCATCGGCACGGCCATTG...CATGCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGGACG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354352.9
ENST00000481524.5
ENST00000539932.5
CDS-3UTR TCA 90 bp GAAGCGCTCCCTGCTCAGGACGCGCCACCACATACTCATAGCCAAAGGTCAAGGCAGCTGAGAGCAGATTaGATGCAATGGCCGTGCCGA +
Preference number: 4 (lower is better)
Translates to: EALPAQDAPPHTHSQRSRQLRAD*MQWPCR
Trigger: TCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTG...CCTTGACCTTTGGCTATGAGTATGTGGTGGCGCGTCCTGAGCAGGGAGCGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR TCA 90 bp CTGATGTCTGCTCGGCGGGCCCGGTCTATCTCTCGAGACTTGACCAGGGCCGAGTGGGATTCGTCCAGCTaGGAGCAGATTGAATGCAAT +
Preference number: 4 (lower is better)
Translates to: LMSARRARSISRDLTRAEWDSSS*EQIECN
Trigger: ATTGCATTCAATCTGCTCTCAGCTGGACGAATCCCA...CTCGGCCCTGGTCAAGTCTCGAGAGATAGACCGGGCCCGCCGAGCAGACATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR GCA 90 bp CTGGGTCCCCAGGAAATCGGGGGTTCTTCCAGGTGCAACACCCGGCCCAGGTTCCACCTGTCATTGAAATaGCGACTTCAGGTACTCTGG +
Preference number: 4 (lower is better)
Translates to: LGPQEIGGSSRCNTRPRFHLSLK*RLQVLW
Trigger: CCAGAGTACCTGAAGTCGGCATTTCAATGACAGGTG...GAACCTGGGCCGGGTGTTGCACCTGGAAGAACCCCCGATTTCCTGGGGACCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR GCA 90 bp ATTCGTCCAGCTGAGAGCAGATTGAATGCAATGGCCGTGCCGATGACTTCCTGCCGAAGAAGCGCTCCCTaGTCAGGACGCGCCACCACA +
Preference number: 4 (lower is better)
Translates to: IRPAESRLNAMAVPMTSCRRSAP*SGRATT
Trigger: TGTGGTGGCGCGTCCTGAGCAGGGAGCGCTTCTTCG...GCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGGACGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR GCA 90 bp GCTGAGAGCAGATTGAATGCAATGGCCGTGCCGATGACTTCCTGCATGTCGGAGGGCTTCTCTGATGTCTaGTCGGCGGGCCCGGTCTAT +
Preference number: 4 (lower is better)
Translates to: AESRLNAMAVPMTSCMSEGFSDV*SAGPVY
Trigger: ATAGACCGGGCCCGCCGAGCAGACATCAGAGAAGCC...CTCCGACATGCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR GCA 90 bp GTGGGAGTCGCGGCCGCCGGCTCCCCTGAGGAAACAGCAAATAATTTGGGCCTCCTGTCAGGTCACGCCTaGAGGTGCTCAATAAATACC +
Preference number: 4 (lower is better)
Translates to: VGVAAAGSPEETANNLGLLSGHA*RCSINT
Trigger: GGTATTTATTGAGCACCTGCAGGCGTGACCTGACAG...GAGGCCCAAATTATTTGCTGTTTCCTCAGGGGAGCCGGCGGCCGCGACTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR GCA 90 bp GCGTGGGAGTCGCGGCCGCCGGCTCCCCTGAGGAAACAGCAAATAATTTGGGCCTTCCTTATGACCTGGTaGCTGACGGAGAAAGAAGTG +
Preference number: 4 (lower is better)
Translates to: AWESRPPAPLRKQQIIWAFLMTW*LTEKEV
Trigger: CACTTCTTTCTCCGTCAGGCACCAGGTCATAAGGAA...GGCCCAAATTATTTGCTGTTTCCTCAGGGGAGCCGGCGGCCGCGACTCCCACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR GCA 90 bp GACGGAGCGAGACTCCGACTTAGGGTAGTAGAGATGGCAGACCTCGCCCAAGTCCTGGGAGGTAGAGGTTaGAGTGAGCTGACATCGCAC +
Preference number: 4 (lower is better)
Translates to: DGARLRLRVVEMADLAQVLGGRG*SELTSH
Trigger: GTGCGATGTCAGCTCACTGCAACCTCTACCTCCCAG...GACTTGGGCGAGGTCTGCCATCTCTACTACCCTAAGTCGGAGTCTCGCTCCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473367.5
CDS-3UTR GCA 90 bp GAGCAGATTGAATGCAATGGCCGTGCCGATGACTTCCTGCATGTCGGAGCCCACCCATCCGCAGCCGAGTaGCCTGCCTCTTACATCAAC +
Preference number: 4 (lower is better)
Translates to: EQIECNGRADDFLHVGAHPSAAE*PASYIN
Trigger: GTTGATGTAAGAGGCAGGGCACTCGGCTGCGGATGG...GTGGGCTCCGACATGCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539932.5
CDS-3UTR CCA 90 bp ATTCGTCCAGCTGAGAGCAGATTGAATGCAATGGCCGTGCCGATGACTTCCTGCGCAAGCCCAACACGGTaGCCCAGAGCAGCACCCAGA +
Preference number: 4 (lower is better)
Translates to: IRPAESRLNAMAVPMTSCASPTR*PRAAPR
Trigger: TCTGGGTGCTGCTCTGGGCCACCGTGTTGGGCTTGC...GCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGGACGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354352.9
ENST00000481524.5
ENST00000539932.5
CDS-3UTR CCA 90 bp AGCTTCCAGCTTCCGCAGCCCGTAGTTATCGAGGAAGAGGAAGAAGAAGGTGTCCGTGCAGCCAGTCGCTaGCAGAGCAAGCCCAACACG +
Preference number: 4 (lower is better)
Translates to: SFQLPQPVVIEEEEEEGVRAASR*QSKPNT
Trigger: CGTGTTGGGCTTGCTCTGCCAGCGACTGGCTGCACG...GACACCTTCTTCTTCCTCTTCCTCGATAACTACGGGCTGCGGAAGCTGGAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354352.9
ENST00000481524.5
ENST00000539932.5
CDS-3UTR CCA 90 bp GAGCAGATTGAATGCAATGGCCGTGCCGATGACTTCCTGCATGTCGGAGCCCACTGTCGGAGCCCACAATaGCTAGCTCGATGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: EQIECNGRADDFLHVGAHCRSPQ*LARWSA
Trigger: GGCTGACCATCGAGCTAGCCATTGTGGGCTCCGACA...GTGGGCTCCGACATGCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354352.9
ENST00000481524.5
ENST00000539932.5
CDS-3UTR CCA 90 bp CGCCCTCTGGGCTACATGAAGGAAACAAAGCTGAGTGGGGTGGCTCACGTCTGTTGTCGGAGCCCACAATaGCTAGCTCGATGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: RPLGYMKETKLSGVAHVCCRSPQ*LARWSA
Trigger: GGCTGACCATCGAGCTAGCCATTGTGGGCTCCGACA...ACAGACGTGAGCCACCCCACTCAGCTTTGTTTCCTTCATGTAGCCCAGAGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539932.5
CDS-3UTR CCA 90 bp CCACCCCAGAGTGGGATTCGTCCAGCTGAGAGCAGATTGAATGCAATGGCCGTGTGTCCACGGCCACGGTaGCGTTGTTCATGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: PPQSGIRPAESRLNAMAVCPRPR*RCSWGR
Trigger: TCTTCCCCATGAACAACGCCACCGTGGCCGTGGACA...CACGGCCATTGCATTCAATCTGCTCTCAGCTGGACGAATCCCACTCTGGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR CCA 90 bp GTCTGGAAAATGGGTTGCAGGCGGAACAGAAAGGCTGCGGCGAATAGGAGCGGAAGAAAGGTGGCTCCGTaGGCAAGGCAACAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: VWKMGCRRNRKAAANRSGRKVAP*ARQQVQ
Trigger: CTGGACCTGTTGCCTTGCCCACGGAGCCACCTTTCT...TCCGCTCCTATTCGCCGCAGCCTTTCTGTTCCGCCTGCAACCCATTTTCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR CAA 72 bp TGCGCTAGGAAACAGCAGGTCCCTAAAGCCCCCAGGTaGGCTGGTCTCAGGAACTGTCCCACTCTATCCTGC +
Preference number: 4 (lower is better)
Translates to: CARKQQVPKAPR*AGLRNCPTLSC
Trigger: GCAGGATAGAGTGGGACAGTTCCTGAGACCAGCCAACCTGGGGGCTTTAGGGACCTGCTGTTTCCTAGCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000233202.11
ENST00000354352.9
CDS-3UTR TCA 90 bp GTGGGAGTCGCGGCCGCCGGCTCCCCTGAGGAAACAGCAAATAATTTGGGCCTCCTTGTCACCTGTCATTaGAATGCCGACTTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: VGVAAAGSPEETANNLGLLVTCH*NADFRY
Trigger: GTACCTGAAGTCGGCATTTCAATGACAGGTGACAAG...GAGGCCCAAATTATTTGCTGTTTCCTCAGGGGAGCCGGCGGCCGCGACTCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR TCA 90 bp GGCGATGGTGGCCTCAATCAGGAAGTACATGTTGGCTTCTCTGATGTCTGCTCGCAATGGCCGTGCCGATaGCTTCCTGCATGTCGGAGC +
Preference number: 4 (lower is better)
Translates to: GDGGLNQEVHVGFSDVCSQWPCR*LPACRS
Trigger: GCTCCGACATGCAGGAAGTCATCGGCACGGCCATTG...CGAGCAGACATCAGAGAAGCCAACATGTACTTCCTGATTGAGGCCACCATCGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR TCA 90 bp CGGGAGGCTGAAGTTGAGGCTGCAGCGAGCTGTGATGGCGCCATTGCACTCCAGTGGGATTCGTCCAGCTaGGAGCAGATTGAATGCAAT +
Preference number: 4 (lower is better)
Translates to: REAEVEAAASCDGAIALQWDSSS*EQIECN
Trigger: ATTGCATTCAATCTGCTCTCAGCTGGACGAATCCCA...CTGGAGTGCAATGGCGCCATCACAGCTCGCTGCAGCCTCAACTTCAGCCTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539932.5
CDS-3UTR TCA 90 bp CATGGGGAAGATCTTGGCGTAGTCGTGGAGGCTGCTGTTGGCACAGATGTTGAAACATGTTGGCTTCTCTaGTGTCTGCTCGGCGGGCCC +
Preference number: 4 (lower is better)
Translates to: HGEDLGVVVEAAVGTDVETCWLL*CLLGGP
Trigger: GGGCCCGCCGAGCAGACATCAGAGAAGCCAACATGT...TTCAACATCTGTGCCAACAGCAGCCTCCACGACTACGCCAAGATCTTCCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR TCA 90 bp CCTGCATGTCGGAGCCCACAATGGCTAGCTCGATGGTCAGCCAGAGGACGGTGCCAGAGAAGCTGTCATTaGAATGCCGACTTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: PACRSPQWLARWSARGRCQRSCH*NADFRY
Trigger: GTACCTGAAGTCGGCATTTCAATGACAGCTTCTCTG...GCACCGTCCTCTGGCTGACCATCGAGCTAGCCATTGTGGGCTCCGACATGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481524.5
CDS-3UTR GCA 90 bp CCTAGAAACAGCCTAGGGAACGTCTATAAAGTGCAGCCCCTGAATGGGGCGAATTGGGAGTGTGAGCGGTaGTCTGGGCAGCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: PRNSLGNVYKVQPLNGANWECER*SGQLLS
Trigger: GCTGAGGAGCTGCCCAGAGCACCGCTCACACTCCCA...ATTCGCCCCATTCAGGGGCTGCACTTTATAGACGTTCCCTAGGCTGTTTCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR GCA 90 bp TGGTGTAGGGGTCTTCTGGATGCTTTAGAGACTTCGTGCCTTCCCGGTTCCCATGGCTTCTCTGATGTCTaGTCGGCGGGCCCGGTCTAT +
Preference number: 4 (lower is better)
Translates to: WCRGLLDALETSCLPGSHGFSDV*SAGPVY
Trigger: ATAGACCGGGCCCGCCGAGCAGACATCAGAGAAGCC...ATGGGAACCGGGAAGGCACGAAGTCTCTAAAGCATCCAGAAGACCCCTACACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR GCA 90 bp CATGGGGAAGATCTTGGCGTAGTCGTGGAGGCTGCTGTTGGCACAGATGTTGAAACTGTCCCGCGTAGGTaGCCGTCATGGTGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: HGEDLGVVVEAAVGTDVETVPRR*PSWWSS
Trigger: AGAGCTCCACCATGACGGGCACCTACGCGGGACAGT...TTCAACATCTGTGCCAACAGCAGCCTCCACGACTACGCCAAGATCTTCCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR GCA 90 bp CACTATTTCAAGCTCCAGTTTGGAGCCTGTGTCCCGCCCAAGTCCTCAAGCCCTCAGTCACGTCATACATaGCACTCCCAGCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: HYFKLQFGACVPPKSSSPQSRHT*HSQPGP
Trigger: AGGGCCTGGCTGGGAGTGGCATGTATGACGTGACTG...AGGGCTTGAGGACTTGGGCGGGACACAGGCTCCAAACTGGAGCTTGAAATAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR GCA 90 bp GTCCCCCATCCATCTCCTCCTTCAGCTGGCATGGACCCATCTTCTCCAGTGCCAGCTTTAGAGACTTCGTaGCTTCCCGGTTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: VPHPSPPSAGMDPSSPVPALETS*LPGSHS
Trigger: GGAATGGGAACCGGGAAGGCACGAAGTCTCTAAAGC...TGGCACTGGAGAAGATGGGTCCATGCCAGCTGAAGGAGGAGATGGATGGGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR GCA 90 bp AGACCCTGGTGTAGGGGTCTTCTGGATGCTTTAGAGACTTCGTGCCTTCCCGGTACCCATCTTCTCCAGTaGCAAACCCAGAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: RPWCRGLLDALETSCLPGTHLLQ*QTQRRR
Trigger: CCGCCTCCTCTGGGTTTGGCACTGGAGAAGATGGGT...ACCGGGAAGGCACGAAGTCTCTAAAGCATCCAGAAGACCCCTACACCAGGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR GCA 90 bp GAGCAGATTGAATGCAATGGCCGTGCCGATGACTTCCTGCATGTCGGAGCCCACCGCAGCCGAGTGCCCTaGCTCTTACATCAACATTCG +
Preference number: 4 (lower is better)
Translates to: EQIECNGRADDFLHVGAHRSRVP*LLHQHS
Trigger: CGAATGTTGATGTAAGAGGCAGGGCACTCGGCTGCG...GTGGGCTCCGACATGCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539932.5
CDS-3UTR CCA 90 bp CGTCCAGCTGAGAGCAGATTGAATGCAATGGCCGTGCCGATGACTTCCTGCATGCCTGCACCCCCTCTCTaGGCACTGGTGCAAGTAAGT +
Preference number: 4 (lower is better)
Translates to: RPAESRLNAMAVPMTSCMPAPPL*ALVQVS
Trigger: ACTTACTTGCACCAGTGCCCAGAGAGGGGGTGCAGG...CATGCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGGACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354352.9
ENST00000481524.5
ENST00000539932.5
CDS-3UTR CCA 90 bp GAGCAGATTGAATGCAATGGCCGTGCCGATGACTTCCTGCATGTCGGAGCCCACCGACTTCAGGTACTCTaGGAGTGTGAGCGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: EQIECNGRADDFLHVGAHRLQVL*ECERCS
Trigger: AGAGCACCGCTCACACTCCCAGAGTACCTGAAGTCG...GTGGGCTCCGACATGCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354352.9
ENST00000481524.5
ENST00000539932.5
CDS-3UTR CCA 90 bp GCACAGACTCTTGGGTTCCTTATGACCTGGTGCCTGACGGAGAAAGAAGTGCGCTCAGGTAGGTCTCTCTaGGAGGTGCTTGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: AQTLGFLMTWCLTEKEVRSGRSL*EVLAVA
Trigger: GGCCACAGCAAGCACCTCCCAGAGAGACCTACCTGA...GCGCACTTCTTTCTCCGTCAGGCACCAGGTCATAAGGAACCCAAGAGTCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CCA 90 bp ACTAGCACCATGATGGAAGAGGTGACGACCTTGTTCAGCAGGCCATTGGCAAACGCAAGCCCAACACGGTaGCCCAGAGCAGCACCCAGA +
Preference number: 4 (lower is better)
Translates to: TSTMMEEVTTLFSRPLANASPTR*PRAAPR
Trigger: TCTGGGTGCTGCTCTGGGCCACCGTGTTGGGCTTGC...GTTTGCCAATGGCCTGCTGAACAAGGTCGTCACCTCTTCCATCATGGTGCTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR CCA 90 bp CCACCCCAGAGTGGGATTCGTCCAGCTGAGAGCAGATTGAATGCAATGGCCGTGAGACGGACAGGGCGATaGTGGCCTCAATCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: PPQSGIRPAESRLNAMAVRRTGR*WPQSGS
Trigger: ACTTCCTGATTGAGGCCACCATCGCCCTGTCCGTCT...CACGGCCATTGCATTCAATCTGCTCTCAGCTGGACGAATCCCACTCTGGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR CCA 90 bp GTCCCCCATCCATCTCCTCCTTCAGCTGGCATGGACCCATCTTCTCCAGTGCCACGGTGGCGTTGTTCATaGGGAAGATCTTGGCGTAGT +
Preference number: 4 (lower is better)
Translates to: VPHPSPPSAGMDPSSPVPRWRCS*GRSWRS
Trigger: ACTACGCCAAGATCTTCCCCATGAACAACGCCACCG...TGGCACTGGAGAAGATGGGTCCATGCCAGCTGAAGGAGGAGATGGATGGGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CCA 90 bp ATCAGGAAGTACATGTTGGCTTCTCTGATGTCTGCTCGGCGGGCCCGGTCTATCTGTCCACGGCCACGGTaGCGTTGTTCATGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: IRKYMLASLMSARRARSICPRPR*RCSWGR
Trigger: TCTTCCCCATGAACAACGCCACCGTGGCCGTGGACA...GATAGACCGGGCCCGCCGAGCAGACATCAGAGAAGCCAACATGTACTTCCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR CCA 90 bp CCCCAGGAAATCGGGGGTTCTTCCAGGTGCAACACCCGGCCCAGGTTCAACTCTGGGTTCCTTATGACCTaGTGCCTGACGGAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: PQEIGGSSRCNTRPRFNSGFLMT*CLTEKE
Trigger: TTCTTTCTCCGTCAGGCACCAGGTCATAAGGAACCC...AGAGTTGAACCTGGGCCGGGTGTTGCACCTGGAAGAACCCCCGATTTCCTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CCA 90 bp CCTAGAAACAGCCTAGGGAACGTCTATAAAGTGCAGCCCCTGAATGGGGCGAATAGTGCAGCCCCTGAATaGGGCGAATGGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PRNSLGNVYKVQPLNGANSAAPE*GEWVPS
Trigger: GCTGGGCACCCATTCGCCCCATTCAGGGGCTGCACT...ATTCGCCCCATTCAGGGGCTGCACTTTATAGACGTTCCCTAGGCTGTTTCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CCA 90 bp GTCTGGAAAATGGGTTGCAGGCGGAACAGAAAGGCTGCGGCGAATAGGAGCGGACTCCTTCAGCTGGCATaGACCCATCTTCTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: VWKMGCRRNRKAAANRSGLLQLA*THLLQC
Trigger: GCACTGGAGAAGATGGGTCCATGCCAGCTGAAGGAG...TCCGCTCCTATTCGCCGCAGCCTTTCTGTTCCGCCTGCAACCCATTTTCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CCA 90 bp CAGCCCGTAGTTATCGAGGAAGAGGAAGAAGAAGGTGTCCACGATGGTGATGAGACGGTGCGGGGCACCTaGGAGGTAGAGGTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: QPVVIEEEEEEGVHDGDETVRGT*EVEVAV
Trigger: CACTGCAACCTCTACCTCCCAGGTGCCCCGCACCGT...CTCATCACCATCGTGGACACCTTCTTCTTCCTCTTCCTCGATAACTACGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR CCA 90 bp CGGGAGGCTGAAGTTGAGGCTGCAGCGAGCTGTGATGGCGCCATTGCACTCCAGAAAATTAGCCTGGTGTaGTGGCATGAGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: REAEVEAAASCDGAIALQKISLV*WHEPVV
Trigger: GACTACAGGCTCATGCCACCACACCAGGCTAATTTT...CTGGAGTGCAATGGCGCCATCACAGCTCGCTGCAGCCTCAACTTCAGCCTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539932.5
CDS-3UTR CCA 90 bp CTGGGCGACGGAGCGAGACTCCGACTTAGGGTAGTAGAGATGGCAGACCTCGCCTTCCGGTTTTGTGTCTaGGATGGGGATCTTCTCACT +
Preference number: 4 (lower is better)
Translates to: LGDGARLRLRVVEMADLAFRFCV*DGDLLT
Trigger: AGTGAGAAGATCCCCATCCCAGACACAAAACCGGAA...GGCGAGGTCTGCCATCTCTACTACCCTAAGTCGGAGTCTCGCTCCGTCGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473367.5
3UTR CAA 72 bp CCACCCCAGAGTGGGATTCGTCCAGCTGAGAGCAGATaGAATGCAATGGCCGTGCCGATGACTTCCTGCATG +
Preference number: 4 (lower is better)
Translates to: PPQSGIRPAESR*NAMAVPMTSCM
Trigger: CATGCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGGACGAATCCCACTCTGGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354352.9
ENST00000481524.5
ENST00000539932.5
CDS-3UTR TCA 90 bp GGCGACGGAGCGAGACTCCGACTTAGGGTAGTAGAGATGGCAGACCTCGCCCAACTTGTCACCTGTCATTaGAATGCCGACTTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: GDGARLRLRVVEMADLAQLVTCH*NADFRY
Trigger: GTACCTGAAGTCGGCATTTCAATGACAGGTGACAAG...TTGGGCGAGGTCTGCCATCTCTACTACCCTAAGTCGGAGTCTCGCTCCGTCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473367.5
CDS-3UTR TCA 90 bp GTAAATGTCCACGGCCACGGTGGCGTTGTTCATGGGGAAGATCTTGGCGTAGTCCAGCTGAGAGCAGATTaGATGCAATGGCCGTGCCGA +
Preference number: 4 (lower is better)
Translates to: VNVHGHGGVVHGEDLGVVQLRAD*MQWPCR
Trigger: TCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTG...GACTACGCCAAGATCTTCCCCATGAACAACGCCACCGTGGCCGTGGACATTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR TCA 90 bp CGTTTTACTGTCTGGAAAATGGGTTGCAGGCGGAACAGAAAGGCTGCGGCGAATACATGTTGGCTTCTCTaGTGTCTGCTCGGCGGGCCC +
Preference number: 4 (lower is better)
Translates to: RFTVWKMGCRRNRKAAANTCWLL*CLLGGP
Trigger: GGGCCCGCCGAGCAGACATCAGAGAAGCCAACATGT...ATTCGCCGCAGCCTTTCTGTTCCGCCTGCAACCCATTTTCCAGACAGTAAAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR TCA 90 bp GACGGAGCGAGACTCCGACTTAGGGTAGTAGAGATGGCAGACCTCGCCCAAGTCGCCAGCCTGAAGATCTaGCTCGATGTTTCCGGTTTT +
Preference number: 4 (lower is better)
Translates to: DGARLRLRVVEMADLAQVASLKI*LDVSGF
Trigger: AAAACCGGAAACATCGAGTCAGATCTTCAGGCTGGC...GACTTGGGCGAGGTCTGCCATCTCTACTACCCTAAGTCGGAGTCTCGCTCCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473367.5
CDS-3UTR GCA 90 bp GGCGACGGAGCGAGACTCCGACTTAGGGTAGTAGAGATGGCAGACCTCGCCCAACACCTGTCATTGAAATaGCGACTTCAGGTACTCTGG +
Preference number: 4 (lower is better)
Translates to: GDGARLRLRVVEMADLAQHLSLK*RLQVLW
Trigger: CCAGAGTACCTGAAGTCGGCATTTCAATGACAGGTG...TTGGGCGAGGTCTGCCATCTCTACTACCCTAAGTCGGAGTCTCGCTCCGTCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473367.5
CDS-3UTR GCA 90 bp ATTGAATGCAATGGCCGTGCCGATGACTTCCTGCATGTCGGAGCCCACAATGGCGTGCCGATGACTTCCTaGATGTCGGAGCCCACAATG +
Preference number: 4 (lower is better)
Translates to: IECNGRADDFLHVGAHNGVPMTS*MSEPTM
Trigger: CATTGTGGGCTCCGACATGCAGGAAGTCATCGGCAC...GCCATTGTGGGCTCCGACATGCAGGAAGTCATCGGCACGGCCATTGCATTCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354352.9
ENST00000481524.5
ENST00000539932.5
CDS-3UTR GCA 90 bp CATGGGGAAGATCTTGGCGTAGTCGTGGAGGCTGCTGTTGGCACAGATGTTGAACTGACATCGCACCATTaGACTCCTGACTGGGCGACG +
Preference number: 4 (lower is better)
Translates to: HGEDLGVVVEAAVGTDVELTSHH*TPDWAT
Trigger: CGTCGCCCAGTCAGGAGTGCAATGGTGCGATGTCAG...TTCAACATCTGTGCCAACAGCAGCCTCCACGACTACGCCAAGATCTTCCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR CCA 90 bp AGTGGGATTCGTCCAGCTGAGAGCAGATTGAATGCAATGGCCGTGCCGATGACTCCTGCACCCCCTCTCTaGGCACTGGTGCAAGTAAGT +
Preference number: 4 (lower is better)
Translates to: SGIRPAESRLNAMAVPMTPAPPL*ALVQVS
Trigger: ACTTACTTGCACCAGTGCCCAGAGAGGGGGTGCAGG...AGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGGACGAATCCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354352.9
ENST00000481524.5
ENST00000539932.5
CDS-3UTR CCA 90 bp ATTGAATGCAATGGCCGTGCCGATGACTTCCTGCATGTCGGAGCCCACAATGGCCGACTTCAGGTACTCTaGGAGTGTGAGCGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: IECNGRADDFLHVGAHNGRLQVL*ECERCS
Trigger: AGAGCACCGCTCACACTCCCAGAGTACCTGAAGTCG...GCCATTGTGGGCTCCGACATGCAGGAAGTCATCGGCACGGCCATTGCATTCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354352.9
ENST00000481524.5
ENST00000539932.5
CDS-3UTR CCA 90 bp GCTGAGAGCAGATTGAATGCAATGGCCGTGCCGATGACTTCCTGCATGTCGGAGCGACTTCAGGTACTCTaGGAGTGTGAGCGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: AESRLNAMAVPMTSCMSERLQVL*ECERCS
Trigger: AGAGCACCGCTCACACTCCCAGAGTACCTGAAGTCG...CTCCGACATGCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354352.9
ENST00000481524.5
ENST00000539932.5
CDS-3UTR CCA 90 bp ATTCGTCCAGCTGAGAGCAGATTGAATGCAATGGCCGTGCCGATGACTTCCTGCCAATGGCTAGCTCGATaGTCAGCCAGAGGACGGTGC +
Preference number: 4 (lower is better)
Translates to: IRPAESRLNAMAVPMTSCQWLAR*SARGRC
Trigger: GCACCGTCCTCTGGCTGACCATCGAGCTAGCCATTG...GCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGGACGAAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354352.9
ENST00000481524.5
ENST00000539932.5
CDS-3UTR CCA 90 bp AGCTTCCAGCTTCCGCAGCCCGTAGTTATCGAGGAAGAGGAAGAAGAAGGTGTCTGTCGGAGCCCACAATaGCTAGCTCGATGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: SFQLPQPVVIEEEEEEGVCRSPQ*LARWSA
Trigger: GGCTGACCATCGAGCTAGCCATTGTGGGCTCCGACA...GACACCTTCTTCTTCCTCTTCCTCGATAACTACGGGCTGCGGAAGCTGGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354352.9
ENST00000481524.5
ENST00000539932.5
CDS-3UTR CCA 90 bp GGGATTCGTCCAGCTGAGAGCAGATTGAATGCAATGGCCGTGCCGATGACTTCCCGGACAGGGCGATGGTaGCCTCAATCAGGAAGTACA +
Preference number: 4 (lower is better)
Translates to: GIRPAESRLNAMAVPMTSRTGRW*PQSGST
Trigger: TGTACTTCCTGATTGAGGCCACCATCGCCCTGTCCG...GGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGGACGAATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR TCA 90 bp AGCTTCCAGCTTCCGCAGCCCGTAGTTATCGAGGAAGAGGAAGAAGAAGGTGTCCAGCTGAGAGCAGATTaGATGCAATGGCCGTGCCGA +
Preference number: 4 (lower is better)
Translates to: SFQLPQPVVIEEEEEEGVQLRAD*MQWPCR
Trigger: TCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTG...GACACCTTCTTCTTCCTCTTCCTCGATAACTACGGGCTGCGGAAGCTGGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354352.9
ENST00000481524.5
ENST00000539932.5
CDS-3UTR TCA 90 bp AAATGTCCACGGCCACGGTGGCGTTGTTCATGGGGAAGATCTTGGCGTAGTCGTATAGCTTCCGCAGGCTaGAGGTGCCCTGTCATTGAA +
Preference number: 4 (lower is better)
Translates to: KCPRPRWRCSWGRSWRSRIASAG*RCPVIE
Trigger: TTCAATGACAGGGCACCTTCAGCCTGCGGAAGCTAT...ACGACTACGCCAAGATCTTCCCCATGAACAACGCCACCGTGGCCGTGGACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539932.5
CDS-3UTR GCA 90 bp AGTGGGATTCGTCCAGCTGAGAGCAGATTGAATGCAATGGCCGTGCCGATGACTGTGCCGATGACTTCCTaGATGTCGGAGCCCACAATG +
Preference number: 4 (lower is better)
Translates to: SGIRPAESRLNAMAVPMTVPMTS*MSEPTM
Trigger: CATTGTGGGCTCCGACATGCAGGAAGTCATCGGCAC...AGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGGACGAATCCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354352.9
ENST00000481524.5
ENST00000539932.5
CDS-3UTR GCA 90 bp CGCAGCCTGGTTGGTTTTCTGGTAGAAGGCCTGCCCAAAGACAGCCATGACAAACCATTGGCAAACTCCTaGATGAGGGTGGGCATGCTG +
Preference number: 4 (lower is better)
Translates to: RSLVGFLVEGLPKDSHDKPLANS*MRVGML
Trigger: CAGCATGCCCACCCTCATGCAGGAGTTTGCCAATGG...TTTGTCATGGCTGTCTTTGGGCAGGCCTTCTACCAGAAAACCAACCAGGCTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR CCA 90 bp CAGCCCGTAGTTATCGAGGAAGAGGAAGAAGAAGGTGTCCACGATGGTGATGAGGACCCGCTTAGCCTTTaGGGACCCTTGTCACCTGTC +
Preference number: 4 (lower is better)
Translates to: QPVVIEEEEEEGVHDGDEDPLSL*GPLSPV
Trigger: GACAGGTGACAAGGGTCCCCAAAGGCTAAGCGGGTC...CTCATCACCATCGTGGACACCTTCTTCTTCCTCTTCCTCGATAACTACGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR CCA 90 bp CGGAGAAAGAAGTGCGCCGCCGTTTTACTGTCTGGAAAATGGGTTGCAGGCGGAAGATGGAACCATAGCTaGACCCGCTTAGCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: RRKKCAAVLLSGKWVAGGRWNHS*TRLAFG
Trigger: CCCAAAGGCTAAGCGGGTCCAGCTATGGTTCCATCT...TCCGCCTGCAACCCATTTTCCAGACAGTAAAACGGCGGCGCACTTCTTTCTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CCA 90 bp AAATGTCCACGGCCACGGTGGCGTTGTTCATGGGGAAGATCTTGGCGTAGTCGTCGGTGGCGTTGTTCATaGGGAAGATCTTGGCGTAGT +
Preference number: 4 (lower is better)
Translates to: KCPRPRWRCSWGRSWRSRRWRCS*GRSWRS
Trigger: ACTACGCCAAGATCTTCCCCATGAACAACGCCACCG...ACGACTACGCCAAGATCTTCCCCATGAACAACGCCACCGTGGCCGTGGACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR CCA 90 bp AGACCCTGGTGTAGGGGTCTTCTGGATGCTTTAGAGACTTCGTGCCTTCCCGGTCGCCGTTTTACTGTCTaGAAAATGGGTTGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: RPWCRGLLDALETSCLPGRRFTV*KMGCRR
Trigger: CCGCCTGCAACCCATTTTCCAGACAGTAAAACGGCG...ACCGGGAAGGCACGAAGTCTCTAAAGCATCCAGAAGACCCCTACACCAGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233202.11
3UTR CAA 72 bp CGCGCGCCACTCCCGGGGCTGAATAAAGAGAATCGCTaGAACCCAGAAGGTGGAGGTTGCAATGAGTTAAGA +
Preference number: 4 (lower is better)
Translates to: RAPLPGLNKENR*NPEGGGCNELR
Trigger: TCTTAACTCATTGCAACCTCCACCTTCTGGGTTCAAGCGATTCTCTTTATTCAGCCCCGGGAGTGGCGCGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR TCA 90 bp CCACCCCAGAGTGGGATTCGTCCAGCTGAGAGCAGATTGAATGCAATGGCCGTGCTTGTCACCTGTCATTaGAATGCCGACTTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: PPQSGIRPAESRLNAMAVLVTCH*NADFRY
Trigger: GTACCTGAAGTCGGCATTTCAATGACAGGTGACAAG...CACGGCCATTGCATTCAATCTGCTCTCAGCTGGACGAATCCCACTCTGGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR GCA 90 bp CCTAGAAACAGCCTAGGGAACGTCTATAAAGTGCAGCCCCTGAATGGGGCGAATGTGCCGATGACTTCCTaGATGTCGGAGCCCACAATG +
Preference number: 4 (lower is better)
Translates to: PRNSLGNVYKVQPLNGANVPMTS*MSEPTM
Trigger: CATTGTGGGCTCCGACATGCAGGAAGTCATCGGCAC...ATTCGCCCCATTCAGGGGCTGCACTTTATAGACGTTCCCTAGGCTGTTTCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR GCA 90 bp CGGAGAAAGAAGTGCGCCGCCGTTTTACTGTCTGGAAAATGGGTTGCAGGCGGAGTCTGGAAAATGGGTTaGAGGCGGAACAGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: RRKKCAAVLLSGKWVAGGVWKMG*RRNRKA
Trigger: AGCCTTTCTGTTCCGCCTGCAACCCATTTTCCAGAC...TCCGCCTGCAACCCATTTTCCAGACAGTAAAACGGCGGCGCACTTCTTTCTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR GCA 90 bp GGGATTCGTCCAGCTGAGAGCAGATTGAATGCAATGGCCGTGCCGATGACTTCCGCCCTGTCATTGAAATaGCGACTTCAGGTACTCTGG +
Preference number: 4 (lower is better)
Translates to: GIRPAESRLNAMAVPMTSALSLK*RLQVLW
Trigger: CCAGAGTACCTGAAGTCGGCATTTCAATGACAGGGC...GGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGGACGAATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539932.5
CDS-3UTR CCA 90 bp ATCTCTTCTCTCCTTGAGGGACCCACTCGCATCGTTGCCCTTTTAAGAAAGAGGCCTGCACCCCCTCTCTaGGCACTGGTGCAAGTAAGT +
Preference number: 4 (lower is better)
Translates to: ISSLLEGPTRIVALLRKRPAPPL*ALVQVS
Trigger: ACTTACTTGCACCAGTGCCCAGAGAGGGGGTGCAGG...CCTCTTTCTTAAAAGGGCAACGATGCGAGTGGGTCCCTCAAGGAGAGAAGAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CCA 90 bp CGTTTTACTGTCTGGAAAATGGGTTGCAGGCGGAACAGAAAGGCTGCGGCGAATCGGACAGGGCGATGGTaGCCTCAATCAGGAAGTACA +
Preference number: 4 (lower is better)
Translates to: RFTVWKMGCRRNRKAAANRTGRW*PQSGST
Trigger: TGTACTTCCTGATTGAGGCCACCATCGCCCTGTCCG...ATTCGCCGCAGCCTTTCTGTTCCGCCTGCAACCCATTTTCCAGACAGTAAAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CCA 90 bp CGTCCAGCTGAGAGCAGATTGAATGCAATGGCCGTGCCGATGACTTCCTGCATGCCTCCATGGCAAGGGTaGTGGTGTCTCCATTTTACA +
Preference number: 4 (lower is better)
Translates to: RPAESRLNAMAVPMTSCMPPWQG*WCLHFT
Trigger: TGTAAAATGGAGACACCACCACCCTTGCCATGGAGG...CATGCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR TCA 90 bp GGGATTCGTCCAGCTGAGAGCAGATTGAATGCAATGGCCGTGCCGATGACTTCCTGGGATTCGTCCAGCTaGGAGCAGATTGAATGCAAT +
Preference number: 4 (lower is better)
Translates to: GIRPAESRLNAMAVPMTSWDSSS*EQIECN
Trigger: ATTGCATTCAATCTGCTCTCAGCTGGACGAATCCCA...GGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGGACGAATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354352.9
ENST00000481524.5
ENST00000539932.5
CDS-3UTR TCA 90 bp CGCAGCCTGGTTGGTTTTCTGGTAGAAGGCCTGCCCAAAGACAGCCATGACAAAAAGGTGCCCTGTCATTaGAATGCCGACTTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: RSLVGFLVEGLPKDSHDKKVPCH*NADFRY
Trigger: GTACCTGAAGTCGGCATTTCAATGACAGGGCACCTT...TTTGTCATGGCTGTCTTTGGGCAGGCCTTCTACCAGAAAACCAACCAGGCTGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539932.5
CDS-3UTR GCA 90 bp CCACCCCAGAGTGGGATTCGTCCAGCTGAGAGCAGATTGAATGCAATGGCCGTGAAGCTGTCATTGAAATaGCGACTTCAGGTACTCTGG +
Preference number: 4 (lower is better)
Translates to: PPQSGIRPAESRLNAMAVKLSLK*RLQVLW
Trigger: CCAGAGTACCTGAAGTCGGCATTTCAATGACAGCTT...CACGGCCATTGCATTCAATCTGCTCTCAGCTGGACGAATCCCACTCTGGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481524.5
CDS-3UTR CCA 90 bp CCTAGAAACAGCCTAGGGAACGTCTATAAAGTGCAGCCCCTGAATGGGGCGAATGCCCGGTTTTGTGTCTaGGATGGGGATCTTCTCACT +
Preference number: 4 (lower is better)
Translates to: PRNSLGNVYKVQPLNGANARFCV*DGDLLT
Trigger: AGTGAGAAGATCCCCATCCCAGACACAAAACCGGGC...ATTCGCCCCATTCAGGGGCTGCACTTTATAGACGTTCCCTAGGCTGTTTCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CCA 90 bp GCACAGACTCTTGGGTTCCTTATGACCTGGTGCCTGACGGAGAAAGAAGTGCGCCCATGGCAAGGGTGGTaGTGTCTCCATTTTACAGAT +
Preference number: 4 (lower is better)
Translates to: AQTLGFLMTWCLTEKEVRPWQGW*CLHFTD
Trigger: ATCTGTAAAATGGAGACACCACCACCCTTGCCATGG...GCGCACTTCTTTCTCCGTCAGGCACCAGGTCATAAGGAACCCAAGAGTCTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CCA 90 bp TGGTGTAGGGGTCTTCTGGATGCTTTAGAGACTTCGTGCCTTCCCGGTTCCCATCCTCCATGGCAAGGGTaGTGGTGTCTCCATTTTACA +
Preference number: 4 (lower is better)
Translates to: WCRGLLDALETSCLPGSHPPWQG*WCLHFT
Trigger: TGTAAAATGGAGACACCACCACCCTTGCCATGGAGG...ATGGGAACCGGGAAGGCACGAAGTCTCTAAAGCATCCAGAAGACCCCTACACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR TCA 90 bp TTGTTTGTTTTTGTCCCAAGTGCCAGACACTGTGTTAAAGTGCTTAACCTCCATGGAAGCCAGGCCCCGTaGAGGCCCATAGCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: LFVFVPSARHCVKVLNLHGSQAP*RPIASA
Trigger: TGCGGAAGCTATGGGCCTTCACGGGGCCTGGCTTCC...ATGGAGGTTAAGCACTTTAACACAGTGTCTGGCACTTGGGACAAAAACAAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000233202.11
ENST00000354352.9
CDS-3UTR TCA 90 bp CTCCTTGAGGGACCCACTCGCATCGTTGCCCTTTTAAGAAAGAGGAAATTCTTCCCACGAAGTAGAGGTTaGTGGCGCAGACTAGCACCA +
Preference number: 4 (lower is better)
Translates to: LLEGPTRIVALLRKRKFFPRSRG*WRRLAP
Trigger: TGGTGCTAGTCTGCGCCATCAACCTCTACTTCGTGG...GAAGAATTTCCTCTTTCTTAAAAGGGCAACGATGCGAGTGGGTCCCTCAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR GCA 90 bp TTGTTTGTTTTTGTCCCAAGTGCCAGACACTGTGTTAAAGTGCTTAACCTCCATACTGTCCCGCGTAGGTaGCCGTCATGGTGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: LFVFVPSARHCVKVLNLHTVPRR*PSWWSS
Trigger: AGAGCTCCACCATGACGGGCACCTACGCGGGACAGT...ATGGAGGTTAAGCACTTTAACACAGTGTCTGGCACTTGGGACAAAAACAAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000233202.11
ENST00000354352.9
CDS-3UTR GCA 90 bp CCTAGAAACAGCCTAGGGAACGTCTATAAAGTGCAGCCCCTGAATGGGGCGAATAAAGGATCTGGGAGATaGCTTTCTTCGCTAAACGTC +
Preference number: 4 (lower is better)
Translates to: PRNSLGNVYKVQPLNGANKGSGR*LSSLNV
Trigger: GACGTTTAGCGAAGAAAGGCATCTCCCAGATCCTTT...ATTCGCCCCATTCAGGGGCTGCACTTTATAGACGTTCCCTAGGCTGTTTCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CCA 90 bp TTGTTTGTTTTTGTCCCAAGTGCCAGACACTGTGTTAAAGTGCTTAACCTCCATGCTGGAGGAGGGACTTaGGGGAGCCTAGAAACAGCC +
Preference number: 4 (lower is better)
Translates to: LFVFVPSARHCVKVLNLHAGGGT*GSLETA
Trigger: GGCTGTTTCTAGGCTCCCCCAAGTCCCTCCTCCAGC...ATGGAGGTTAAGCACTTTAACACAGTGTCTGGCACTTGGGACAAAAACAAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR GCA 90 bp TTGTTTGTTTTTGTCCCAAGTGCCAGACACTGTGTTAAAGTGCTTAACCTCCATCAGTCACGTCATACATaGCACTCCCAGCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LFVFVPSARHCVKVLNLHQSRHT*HSQPGP
Trigger: AGGGCCTGGCTGGGAGTGGCATGTATGACGTGACTG...ATGGAGGTTAAGCACTTTAACACAGTGTCTGGCACTTGGGACAAAAACAAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000233202.11
ENST00000354352.9
CDS-3UTR CCA 90 bp TTGTTTGTTTTTGTCCCAAGTGCCAGACACTGTGTTAAAGTGCTTAACCTCCATGACCCGCTTAGCCTTTaGGGACCCTTGTCACCTGTC +
Preference number: 4 (lower is better)
Translates to: LFVFVPSARHCVKVLNLHDPLSL*GPLSPV
Trigger: GACAGGTGACAAGGGTCCCCAAAGGCTAAGCGGGTC...ATGGAGGTTAAGCACTTTAACACAGTGTCTGGCACTTGGGACAAAAACAAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000233202.11
ENST00000354352.9
CDS-3UTR CCA 90 bp CGCCACCACATACTCATAGCCAAAGGTCAAGGCCATAATGGTTATAAGGAGTCCCCATGGCAAGGGTGGTaGTGTCTCCATTTTACAGAT +
Preference number: 4 (lower is better)
Translates to: RHHILIAKGQGHNGYKESPWQGW*CLHFTD
Trigger: ATCTGTAAAATGGAGACACCACCACCCTTGCCATGG...GGACTCCTTATAACCATTATGGCCTTGACCTTTGGCTATGAGTATGTGGTGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR CCA 90 bp TTGTTTGTTTTTGTCCCAAGTGCCAGACACTGTGTTAAAGTGCTTAACCTCCATGAGCGGACCAGACCCTaGTGTAGGGGTCTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: LFVFVPSARHCVKVLNLHERTRP*CRGLLD
Trigger: ATCCAGAAGACCCCTACACCAGGGTCTGGTCCGCTC...ATGGAGGTTAAGCACTTTAACACAGTGTCTGGCACTTGGGACAAAAACAAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR TCA 90 bp TTGTTTGTTTTTGTCCCAAGTGCCAGACACTGTGTTAAAGTGCTTAACCTCCATGCCAGCCTGAAGATCTaGCTCGATGTTTCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LFVFVPSARHCVKVLNLHASLKI*LDVSWV
Trigger: GACCCAGGAAACATCGAGTCAGATCTTCAGGCTGGC...ATGGAGGTTAAGCACTTTAACACAGTGTCTGGCACTTGGGACAAAAACAAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000233202.11
ENST00000354352.9
CDS-3UTR GCA 90 bp TTGTTTGTTTTTGTCCCAAGTGCCAGACACTGTGTTAAAGTGCTTAACCTCCATCCATTGGCAAACTCCTaGATGAGGGTGGGCATGCTG +
Preference number: 4 (lower is better)
Translates to: LFVFVPSARHCVKVLNLHPLANS*MRVGML
Trigger: CAGCATGCCCACCCTCATGCAGGAGTTTGCCAATGG...ATGGAGGTTAAGCACTTTAACACAGTGTCTGGCACTTGGGACAAAAACAAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000233202.11
ENST00000354352.9
CDS-3UTR CCA 90 bp TTGTTTGTTTTTGTCCCAAGTGCCAGACACTGTGTTAAAGTGCTTAACCTCCATCATTCCCTGCTCCTTTaGACGAGAAGGGAACTAGTA +
Preference number: 4 (lower is better)
Translates to: LFVFVPSARHCVKVLNLHHSLLL*TRRELV
Trigger: TACTAGTTCCCTTCTCGTCCAAAGGAGCAGGGAATG...ATGGAGGTTAAGCACTTTAACACAGTGTCTGGCACTTGGGACAAAAACAAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS CCA 90 bp CGCTCCCTGCTCAGGACGCGCCACCACATACTGCAGGGAGGAGCCTaGTCAGGACAAGCCCCGCCCCTCGCAACCACGCCGCGGTCACCA +
Preference number: 5 (lower is better)
Translates to: RSLLRTRHHILQGGA*SGQAPPLATTPRSP
Trigger: TGGTGACCGCGGCGTGGTTGCGAGGGGCGGGGCTTGTCCTGACCAGGCTCCTCCCTGCAGTATGTGGTGGCGCGTCCTGAGCAGGGAGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469449.1
CDS GCA 90 bp CAGCCCGGGCACGAGGGCAGGAACAGGCCCCGAAGAAGCGCTCCCTaGTCAGGACGCGCCACCACATACTGCAGGGAGGAGCCTGGTCAG +
Preference number: 5 (lower is better)
Translates to: QPGHEGRNRPRRSAP*SGRATTYCREEPGQ
Trigger: CTGACCAGGCTCCTCCCTGCAGTATGTGGTGGCGCGTCCTGAGCAGGGAGCGCTTCTTCGGGGCCTGTTCCTGCCCTCGTGCCCGGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469449.1
CDS-3UTR CAA 90 bp GTGCCAAACCCAGAGGAGGCGGGCGGCCCTCTTGCCCAGGTACCCTCTGCAGCGACCTCGCCCAAGTCCTaGCCTGTCACCACGCCCAGA +
Preference number: 5 (lower is better)
Translates to: VPNPEEAGGPLAQVPSAATSPKS*PVTTPR
Trigger: TCTGGGCGTGGTGACAGGCAAGGACTTGGGCGAGGT...CGCTGCAGAGGGTACCTGGGCAAGAGGGCCGCCCGCCTCCTCTGGGTTTGGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CAA 90 bp CAGGTCCCGGAAGACAGCCACGAGCACGGTGGGCAGGATGGCGCAGGAGCGGGTACCTCGCCCAAGTCCTaGCCTGTCACCACGCCCAGA +
Preference number: 5 (lower is better)
Translates to: QVPEDSHEHGGQDGAGAGTSPKS*PVTTPR
Trigger: TCTGGGCGTGGTGACAGGCAAGGACTTGGGCGAGGT...ACCCGCTCCTGCGCCATCCTGCCCACCGTGCTCGTGGCTGTCTTCCGGGACCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR CAA 90 bp GGTGGCCGCAGCCCGGGCACGAGGGCAGGAACAGGCCCCGAAGAAGCGCTCCCTACGGCCACGGTGGCGTaGTTCATGGGGAAGATCTTG +
Preference number: 5 (lower is better)
Translates to: GGRSPGTRAGTGPEEALPTATVA*FMGKIL
Trigger: CAAGATCTTCCCCATGAACAACGCCACCGTGGCCGT...AGGGAGCGCTTCTTCGGGGCCTGTTCCTGCCCTCGTGCCCGGGCTGCGGCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR CAA 90 bp GCGTGGGAGTCGCGGCCGCCGGCTCCCCTGAGGAAACAGCAAATAATTTGGGCCAGGCGGGCGGCCCTCTaGCCCAGGTACCCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: AWESRPPAPLRKQQIIWARRAAL*PRYPLQ
Trigger: CTGCAGAGGGTACCTGGGCAAGAGGGCCGCCCGCCT...GGCCCAAATTATTTGCTGTTTCCTCAGGGGAGCCGGCGGCCGCGACTCCCACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS CCA 90 bp CGCCCAGACGTGCAGCCAGTCGCTGGCAGAGCAAGCCCAACACGGTaGCCCAGAGCAGCACCCAGAGAAGCTGTGAGGAGGCAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: RPDVQPVAGRASPTR*PRAAPREAVRRQGE
Trigger: CTCTCCCTGCCTCCTCACAGCTTCTCTGGGTGCTGCTCTGGGCCACCGTGTTGGGCTTGCTCTGCCAGCGACTGGCTGCACGTCTGGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468221.5
CDS-3UTR CAA 90 bp AGAGGAGGCGGGCGGCCCTCTTGCCCAGGTACCCTCTGCAGCGCTTGCCCAGGTAGCACCCAGAGAAGTTaGAATCCCGCCACGGCGCCA +
Preference number: 5 (lower is better)
Translates to: RGGGRPSCPGTLCSACPGSTQRS*NPATAP
Trigger: TGGCGCCGTGGCGGGATTCAAACTTCTCTGGGTGCT...ACCTGGGCAAGCGCTGCAGAGGGTACCTGGGCAAGAGGGCCGCCCGCCTCCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS CCA 90 bp TGGGAGGTGCTTGCTGTGGCCCTGGGCTGGTCGGGCTGGTCGGGCTaGAGATGGAACCATAGCTGGACCCGCTTAGCCTTTGGGGACCCT +
Preference number: 5 (lower is better)
Translates to: WEVLAVALGWSGWSG*RWNHSWTRLAFGDP
Trigger: AGGGTCCCCAAAGGCTAAGCGGGTCCAGCTATGGTTCCATCTCCAGCCCGACCAGCCCGACCAGCCCAGGGCCACAGCAAGCACCTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233202.11
ENST00000354352.9
ENST00000465984.5
ENST00000468221.5
ENST00000473367.5
ENST00000475225.5
ENST00000492413.5
ENST00000494322.5
CDS CCA 90 bp CACTCAGGTAGGTCTCTCTGGGAGGTGCTTGCTGTGGCCCTGGGCTaGTCGGGCTGGTCGGGCTGGAGATGGAACCATAGCTGGACCCGC +
Preference number: 5 (lower is better)
Translates to: HSGRSLWEVLAVALG*SGWSGWRWNHSWTR
Trigger: GCGGGTCCAGCTATGGTTCCATCTCCAGCCCGACCAGCCCGACCAGCCCAGGGCCACAGCAAGCACCTCCCAGAGAGACCTACCTGAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233202.11
ENST00000354352.9
ENST00000465984.5
ENST00000468221.5
ENST00000473367.5
ENST00000492413.5
ENST00000494322.5
CDS-3UTR CAA 90 bp GGTTGGCTGGTCTCAGGAACTGTCCCACTCTATCCTGCTGCCTGCACGCGCCCCTACCCTCTGCAGCGCTaGCCCAGGTCGCACCAGACC +
Preference number: 5 (lower is better)
Translates to: GWLVSGTVPLYPAACTRPYPLQR*PRSHQT
Trigger: GGTCTGGTGCGACCTGGGCAAGCGCTGCAGAGGGTA...GGGGCGCGTGCAGGCAGCAGGATAGAGTGGGACAGTTCCTGAGACCAGCCAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS GCA 90 bp GGACACGAGAGAGGCTCAGGACTGGCTGGTTGCTGCTGGCCCACCTaGATCAACTCCTCTTCATCTCCCAGCGCCCACACTGGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: GHERGSGLAGCCWPT*INSSSSPSAHTGGG
Trigger: CCCACCCCCAGTGTGGGCGCTGGGAGATGAAGAGGAGTTGATGCAGGTGGGCCAGCAGCAACCAGCCAGTCCTGAGCCTCTCTCGTGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490536.1
CDS CCA 90 bp GTGCTTGCTGTGGCCCTGGGCTGGTCGGGCTGGTCGGGCTGGAGATaGAACCATAGCTGGACCCGCTTAGCCTTTGGGGACCCTTGTCAC +
Preference number: 5 (lower is better)
Translates to: VLAVALGWSGWSGWR*NHSWTRLAFGDPCH
Trigger: GTGACAAGGGTCCCCAAAGGCTAAGCGGGTCCAGCTATGGTTCCATCTCCAGCCCGACCAGCCCGACCAGCCCAGGGCCACAGCAAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233202.11
ENST00000354352.9
ENST00000465984.5
ENST00000468221.5
ENST00000473367.5
ENST00000475225.5
ENST00000492413.5
ENST00000494322.5
CDS CCA 90 bp CGCCCAGACGTGCAGCCAGTCGCTGGCAGAGCAAGCCCAACACGGTaGCCCAGAGCAGCACCCAGAGAAGCGGTTTTGTGTCTGGGATGG +
Preference number: 5 (lower is better)
Translates to: RPDVQPVAGRASPTR*PRAAPREAVLCLGW
Trigger: CCATCCCAGACACAAAACCGCTTCTCTGGGTGCTGCTCTGGGCCACCGTGTTGGGCTTGCTCTGCCAGCGACTGGCTGCACGTCTGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465984.5
CDS CCA 90 bp GGGGTCTCTAACTCCTACGGAGCCTCAGGGCTGGAGACAGGAATCTaGCCTCCTGGGAGCAGGACCCTAAGCGCCCCCAGACAGCTAGGG +
Preference number: 5 (lower is better)
Translates to: GVSNSYGASGLETGI*PPGSRTLSAPRQLG
Trigger: CCCTAGCTGTCTGGGGGCGCTTAGGGTCCTGCTCCCAGGAGGCCAGATTCCTGTCTCCAGCCCTGAGGCTCCGTAGGAGTTAGAGACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465984.5
ENST00000469449.1
ENST00000475225.5
ENST00000492413.5
CDS CCA 90 bp TTCTCAGGTAGGTCTCTCTGGGAGGTGCTTGCTGTGGCCCTGGGCTaGTCGGGCTGGTCGGGCTGGAGATGGAACCATAGCTGGACCCGC +
Preference number: 5 (lower is better)
Translates to: FSGRSLWEVLAVALG*SGWSGWRWNHSWTR
Trigger: GCGGGTCCAGCTATGGTTCCATCTCCAGCCCGACCAGCCCGACCAGCCCAGGGCCACAGCAAGCACCTCCCAGAGAGACCTACCTGAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475225.5
CDS-3UTR CAA 90 bp AGAGGAGGCGGGCGGCCCTCTTGCCCAGGTACCCTCTGCAGCGCTTGCCCAGGTATTTCAAGCTCCAGTTaGGAGCCTGTGTCCCGCCCA +
Preference number: 5 (lower is better)
Translates to: RGGGRPSCPGTLCSACPGISSSS*EPVSRP
Trigger: TGGGCGGGACACAGGCTCCAAACTGGAGCTTGAAAT...ACCTGGGCAAGCGCTGCAGAGGGTACCTGGGCAAGAGGGCCGCCCGCCTCCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS GCA 90 bp GTCTGGGATGGGGATCTTCTCACTCAGGTAGGTCTCTCTGGGAGGTaGTTGCTGTGGCCCTGGGCTGGTCGGGCTGGTCGGGCTGGAGAT +
Preference number: 5 (lower is better)
Translates to: VWDGDLLTQVGLSGR*LLWPWAGRAGRAGD
Trigger: ATCTCCAGCCCGACCAGCCCGACCAGCCCAGGGCCACAGCAAGCACCTCCCAGAGAGACCTACCTGAGTGAGAAGATCCCCATCCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233202.11
ENST00000354352.9
ENST00000465984.5
ENST00000468221.5
ENST00000473367.5
ENST00000492413.5
ENST00000494322.5
CDS CCA 90 bp AGGTCTCTCTGGGAGGTGCTTGCTGTGGCCCTGGGCTGGTCGGGCTaGTCGGGCTGGAGATGGAACCATAGCTGGACCCGCTTAGCCTTT +
Preference number: 5 (lower is better)
Translates to: RSLWEVLAVALGWSG*SGWRWNHSWTRLAF
Trigger: AAAGGCTAAGCGGGTCCAGCTATGGTTCCATCTCCAGCCCGACCAGCCCGACCAGCCCAGGGCCACAGCAAGCACCTCCCAGAGAGACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233202.11
ENST00000354352.9
ENST00000465984.5
ENST00000468221.5
ENST00000473367.5
ENST00000475225.5
ENST00000492413.5
ENST00000494322.5
CDS CCA 90 bp GCAGAAGTGGCCAGCCCTGGCGGAAGGGTCTGGTTACCCATGGAGTaGACCTTTGTTCCCCTCCCAGCCTGCCCTGTGCCCCACAACACA +
Preference number: 5 (lower is better)
Translates to: AEVASPGGRVWLPME*TFVPLPACPVPHNT
Trigger: TGTGTTGTGGGGCACAGGGCAGGCTGGGAGGGGAACAAAGGTCCACTCCATGGGTAACCAGACCCTTCCGCCAGGGCTGGCCACTTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468221.5
CDS CCA 90 bp CAAAGGCAGAAGTGGCCAGCCCTGGCGGAAGGGTCTGGTTACCCATaGAGTGGACCTTTGTTCCCCTCCCAGCCTGCCCTGTGCCCCACA +
Preference number: 5 (lower is better)
Translates to: QRQKWPALAEGSGYP*SGPLFPSQPALCPT
Trigger: TGTGGGGCACAGGGCAGGCTGGGAGGGGAACAAAGGTCCACTCCATGGGTAACCAGACCCTTCCGCCAGGGCTGGCCACTTCTGCCTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468221.5
CDS CCA 90 bp CTGGCCCACCTGCATCAACTCCTCTTCATCTCCCAGCGCCCACACTaGGGGTGGGGATACACTGAGGCCGCTTCTCTGGTCTGTGGGACC +
Preference number: 5 (lower is better)
Translates to: LAHLHQLLFISQRPH*GWGYTEAASLVCGT
Trigger: GGTCCCACAGACCAGAGAAGCGGCCTCAGTGTATCCCCACCCCCAGTGTGGGCGCTGGGAGATGAAGAGGAGTTGATGCAGGTGGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490536.1
CDS CCA 90 bp GCCCTACCTCCATCACGAACTGTCCCGCGTAGGTGCCCGTCATGGTaGAGCTCTGCCCAGCCGCCAGGAGACCTATGGCCCAGATGTAGA +
Preference number: 5 (lower is better)
Translates to: ALPPSRTVPRRCPSW*SSAQPPGDLWPRCR
Trigger: TCTACATCTGGGCCATAGGTCTCCTGGCGGCTGGGCAGAGCTCCACCATGACGGGCACCTACGCGGGACAGTTCGTGATGGAGGTAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490872.1
CDS-3UTR CAA 90 bp TGGCTGGTCTCAGGAACTGTCCCACTCTATCCTGCTGCCTGCACGCGCCCCCTCAGCACCCAGAGAAGTTaGAATCCCGCCACGGCGCCA +
Preference number: 5 (lower is better)
Translates to: WLVSGTVPLYPAACTRPLSTQRS*NPATAP
Trigger: TGGCGCCGTGGCGGGATTCAAACTTCTCTGGGTGCT...GAGGGGGCGCGTGCAGGCAGCAGGATAGAGTGGGACAGTTCCTGAGACCAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000233202.11
ENST00000354352.9
CDS-3UTR CAA 90 bp TCCCACTCTATCCTGCTGCCTGCACGCGCCCCCTCCACATCCAGCAGGCCAGTCTCTATCTCTCGAGACTaGACCAGGGCCGAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: SHSILLPARAPSTSSRPVSISRD*TRAECR
Trigger: CCTGCACTCGGCCCTGGTCAAGTCTCGAGAGATAGA...GACTGGCCTGCTGGATGTGGAGGGGGCGCGTGCAGGCAGCAGGATAGAGTGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000233202.11
ENST00000354352.9
CDS-3UTR CAA 90 bp AACCCAGAGGAGGCGGGCGGCCCTCTTGCCCAGGTACCCTCTGCAGCGCTTGCCCCATTCCCTGCTCCTTaGGACGAGAAGGGAACTAGT +
Preference number: 5 (lower is better)
Translates to: NPEEAGGPLAQVPSAALAPFPAP*DEKGTS
Trigger: ACTAGTTCCCTTCTCGTCCAAAGGAGCAGGGAATGG...GGCAAGCGCTGCAGAGGGTACCTGGGCAAGAGGGCCGCCCGCCTCCTCTGGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS CCA 90 bp CTTCTCACTCAGGTAGGTCTCTCTGGGAGGTGCTTGCTGTGGCCCTaGGCTGGTCGGGCTGGTCGGGCTGGAGATGGAACCATAGCTGGA +
Preference number: 5 (lower is better)
Translates to: LLTQVGLSGRCLLWP*AGRAGRAGDGTIAG
Trigger: TCCAGCTATGGTTCCATCTCCAGCCCGACCAGCCCGACCAGCCCAGGGCCACAGCAAGCACCTCCCAGAGAGACCTACCTGAGTGAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233202.11
ENST00000354352.9
ENST00000465984.5
ENST00000468221.5
ENST00000473367.5
ENST00000492413.5
ENST00000494322.5
CDS CCA 90 bp GGGGATCTTCTCACTCAGGTAGGTCTCTCTGGGAGGTGCTTGCTGTaGCCCTGGGCTGGTCGGGCTGGTCGGGCTGGAGATGGAACCATA +
Preference number: 5 (lower is better)
Translates to: GDLLTQVGLSGRCLL*PWAGRAGRAGDGTI
Trigger: TATGGTTCCATCTCCAGCCCGACCAGCCCGACCAGCCCAGGGCCACAGCAAGCACCTCCCAGAGAGACCTACCTGAGTGAGAAGATCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233202.11
ENST00000354352.9
ENST00000465984.5
ENST00000468221.5
ENST00000473367.5
ENST00000492413.5
ENST00000494322.5
CDS CCA 90 bp GTTTTGTGTCTGGGATGGGGATCTTCTCACTCAGGTAGGTCTCTCTaGGAGGTGCTTGCTGTGGCCCTGGGCTGGTCGGGCTGGTCGGGC +
Preference number: 5 (lower is better)
Translates to: VLCLGWGSSHSGRSL*EVLAVALGWSGWSG
Trigger: GCCCGACCAGCCCGACCAGCCCAGGGCCACAGCAAGCACCTCCCAGAGAGACCTACCTGAGTGAGAAGATCCCCATCCCAGACACAAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233202.11
ENST00000354352.9
ENST00000465984.5
ENST00000468221.5
ENST00000473367.5
ENST00000492413.5
ENST00000494322.5
CDS CCA 90 bp TGTGGCATAGAACAGTCGAGGCAGGGCAGAGCTAGAGGAGAGACCTaGCACCCGGCGCAGCAGGGAGTTTGGGGCTGCAGTCCCAAAGTC +
Preference number: 5 (lower is better)
Translates to: CGIEQSRQGRARGET*HPAQQGVWGCSPKV
Trigger: GACTTTGGGACTGCAGCCCCAAACTCCCTGCTGCGCCGGGTGCCAGGTCTCTCCTCTAGCTCTGCCCTGCCTCGACTGTTCTATGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000465984.5
ENST00000469449.1
ENST00000469799.5
ENST00000475225.5
ENST00000492413.5
CDS CCA 90 bp TGGCCAGCATGGCAAACCCCGTCTATGCCACTCCCAGCCAGGCCCTaGTGTGGGCCTAGCCAGAGGTCTCCCCTTTCTGGTCCTCTTCAA +
Preference number: 5 (lower is better)
Translates to: WPAWQTPSMPLPARP*CGPSQRSPLSGPLQ
Trigger: TTGAAGAGGACCAGAAAGGGGAGACCTCTGGCTAGGCCCACACCAGGGCCTGGCTGGGAGTGGCATAGACGGGGTTTGCCATGCTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465984.5
CDS CCA 90 bp CGCCCAGACGTGCAGCCAGTCGCTGGCAGAGCAAGCCCAACACGGTaGCCCAGAGCAGCACCCAGAGAAGCCTGTAATCCCAGCACTTTA +
Preference number: 5 (lower is better)
Translates to: RPDVQPVAGRASPTR*PRAAPREACNPSTL
Trigger: TAAAGTGCTGGGATTACAGGCTTCTCTGGGTGCTGCTCTGGGCCACCGTGTTGGGCTTGCTCTGCCAGCGACTGGCTGCACGTCTGGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471875.5
CDS CCA 90 bp CACCTGCATCAACTCCTCTTCATCTCCCAGCGCCCACACTGGGGGTaGGGATACACTGAGGCCGCTTCTCTGGTCTGTGGGACCTGGAGC +
Preference number: 5 (lower is better)
Translates to: HLHQLLFISQRPHWG*GYTEAASLVCGTWS
Trigger: GCTCCAGGTCCCACAGACCAGAGAAGCGGCCTCAGTGTATCCCCACCCCCAGTGTGGGCGCTGGGAGATGAAGAGGAGTTGATGCAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490536.1
CDS-3UTR CAA 90 bp GCGTGGGAGTCGCGGCCGCCGGCTCCCCTGAGGAAACAGCAAATAATTTGGGCCCCAGCTGAGAGCAGATaGAATGCAATGGCCGTGCCG +
Preference number: 5 (lower is better)
Translates to: AWESRPPAPLRKQQIIWAPAESR*NAMAVP
Trigger: CGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGG...GGCCCAAATTATTTGCTGTTTCCTCAGGGGAGCCGGCGGCCGCGACTCCCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CAA 90 bp TGGTGGGAGCTGTGGGCCAGAAAGGTGGCTCCGTGGGCAAGGCAACAGGTCCAGTCTATCTCTCGAGACTaGACCAGGGCCGAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: WWELWARKVAPWARQQVQSISRD*TRAECR
Trigger: CCTGCACTCGGCCCTGGTCAAGTCTCGAGAGATAGA...CTGGACCTGTTGCCTTGCCCACGGAGCCACCTTTCTGGCCCACAGCTCCCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR CAA 90 bp TGGCTGGTCTCAGGAACTGTCCCACTCTATCCTGCTGCCTGCACGCGCCCCCTCACGGCCACGGTGGCGTaGTTCATGGGGAAGATCTTG +
Preference number: 5 (lower is better)
Translates to: WLVSGTVPLYPAACTRPLTATVA*FMGKIL
Trigger: CAAGATCTTCCCCATGAACAACGCCACCGTGGCCGT...GAGGGGGCGCGTGCAGGCAGCAGGATAGAGTGGGACAGTTCCTGAGACCAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000233202.11
ENST00000354352.9
CDS-3UTR CAA 90 bp CACGGGCGAAGCGTGACCACCGCAGCCTCAGGAAGCCCTCCATCACGAACTGTCACGGCCACGGTGGCGTaGTTCATGGGGAAGATCTTG +
Preference number: 5 (lower is better)
Translates to: HGRSVTTAASGSPPSRTVTATVA*FMGKIL
Trigger: CAAGATCTTCCCCATGAACAACGCCACCGTGGCCGT...GACAGTTCGTGATGGAGGGCTTCCTGAGGCTGCGGTGGTCACGCTTCGCCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR CAA 90 bp GCGTGGGAGTCGCGGCCGCCGGCTCCCCTGAGGAAACAGCAAATAATTTGGGCCAGGCTCTGCAGCACGTaGAGCAGATCATTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: AWESRPPAPLRKQQIIWARLCST*SRSLRP
Trigger: GGGCCTCAATGATCTGCTCAACGTGCTGCAGAGCCT...GGCCCAAATTATTTGCTGTTTCCTCAGGGGAGCCGGCGGCCGCGACTCCCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CAA 90 bp AGGCCGCCTGCCCTGCTGGGTCCCCAGGAAATCGGGGGTTCTTCCAGGTGCAACGAAGAGGTGACGACCTaGTTCAGCAGGCCATTGGCA +
Preference number: 5 (lower is better)
Translates to: RPPALLGPQEIGGSSRCNEEVTT*FSRPLA
Trigger: TGCCAATGGCCTGCTGAACAAGGTCGTCACCTCTTC...GTTGCACCTGGAAGAACCCCCGATTTCCTGGGGACCCAGCAGGGCAGGCGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CAA 90 bp CCAGGCCGCCTGCCCTGCTGGGTCCCCAGGAAATCGGGGGTTCTTCCAGGTGCATGTCTGGAAAATGGGTaGCAGGCGGAACAGAAAGGC +
Preference number: 5 (lower is better)
Translates to: PGRLPCWVPRKSGVLPGACLENG*QAEQKG
Trigger: GCCTTTCTGTTCCGCCTGCAACCCATTTTCCAGACA...TGCACCTGGAAGAACCCCCGATTTCCTGGGGACCCAGCAGGGCAGGCGGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS CCA 90 bp GCCCTGGGCTGGTCGGGCTGGTCGGGCTGGAGATGGAACCATAGCTaGACCCGCTTAGCCTTTGGGGACCCTTGTCACCTGTCATTGAAA +
Preference number: 5 (lower is better)
Translates to: ALGWSGWSGWRWNHS*TRLAFGDPCHLSLK
Trigger: TTTCAATGACAGGTGACAAGGGTCCCCAAAGGCTAAGCGGGTCCAGCTATGGTTCCATCTCCAGCCCGACCAGCCCGACCAGCCCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233202.11
ENST00000354352.9
ENST00000465984.5
ENST00000468221.5
ENST00000473367.5
ENST00000475225.5
ENST00000492413.5
ENST00000494322.5
CDS CCA 90 bp GATGTTTCTCAGGTAGGTCTCTCTGGGAGGTGCTTGCTGTGGCCCTaGGCTGGTCGGGCTGGTCGGGCTGGAGATGGAACCATAGCTGGA +
Preference number: 5 (lower is better)
Translates to: DVSQVGLSGRCLLWP*AGRAGRAGDGTIAG
Trigger: TCCAGCTATGGTTCCATCTCCAGCCCGACCAGCCCGACCAGCCCAGGGCCACAGCAAGCACCTCCCAGAGAGACCTACCTGAGAAACATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475225.5
CDS-3UTR CAA 90 bp GACGGAGCGAGACTCCGACTTAGGGTAGTAGAGATGGCAGACCTCGCCCAAGTCACCTCGCCCAAGTCCTaGCCTGTCACCACGCCCAGA +
Preference number: 5 (lower is better)
Translates to: DGARLRLRVVEMADLAQVTSPKS*PVTTPR
Trigger: TCTGGGCGTGGTGACAGGCAAGGACTTGGGCGAGGT...GACTTGGGCGAGGTCTGCCATCTCTACTACCCTAAGTCGGAGTCTCGCTCCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473367.5
CDS-3UTR CAA 90 bp CCTGCATGTCGGAGCCCACAATGGCTAGCTCGATGGTCAGCCAGAGGACGGTGCCCAGCTGAGAGCAGATaGAATGCAATGGCCGTGCCG +
Preference number: 5 (lower is better)
Translates to: PACRSPQWLARWSARGRCPAESR*NAMAVP
Trigger: CGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGG...GCACCGTCCTCTGGCTGACCATCGAGCTAGCCATTGTGGGCTCCGACATGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481524.5
ENST00000539932.5
CDS-3UTR CAA 90 bp CCTGCATGTCGGAGCCCACAATGGCTAGCTCGATGGTCAGCCAGAGGACGGTGCTCTATCTCTCGAGACTaGACCAGGGCCGAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: PACRSPQWLARWSARGRCSISRD*TRAECR
Trigger: CCTGCACTCGGCCCTGGTCAAGTCTCGAGAGATAGA...GCACCGTCCTCTGGCTGACCATCGAGCTAGCCATTGTGGGCTCCGACATGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539932.5
CDS-3UTR CAA 90 bp GATGTCTGCTCGGCGGGCCCGGTCTATCTCTCGAGACTTGACCAGGGCCGAGTGTCGTGGAGGCTGCTGTaGGCACAGATGTTGAACGCA +
Preference number: 5 (lower is better)
Translates to: DVCSAGPVYLSRLDQGRVSWRLL*AQMLNA
Trigger: TGCGTTCAACATCTGTGCCAACAGCAGCCTCCACGA...CACTCGGCCCTGGTCAAGTCTCGAGAGATAGACCGGGCCCGCCGAGCAGACATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR CAA 90 bp GCCCCCTCCACATCCAGCAGGCCAGTCACGTCATACATGCCACTCCCAGCCAGGACGTTGAGCAGATCATaGAGGCCCGACAAGTCCCTC +
Preference number: 5 (lower is better)
Translates to: APSTSSRPVTSYMPLPARTLSRS*RPDKSL
Trigger: GAGGGACTTGTCGGGCCTCAATGATCTGCTCAACGT...CCTGGCTGGGAGTGGCATGTATGACGTGACTGGCCTGCTGGATGTGGAGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000233202.11
ENST00000354352.9
CDS-3UTR CAA 90 bp CCCCAGGAAATCGGGGGTTCTTCCAGGTGCAACACCCGGCCCAGGTTCAACTCTCCATCTCTTCTCTCCTaGAGGGACCCACTCGCATCG +
Preference number: 5 (lower is better)
Translates to: PQEIGGSSRCNTRPRFNSPSLLS*RDPLAS
Trigger: CGATGCGAGTGGGTCCCTCAAGGAGAGAAGAGATGG...AGAGTTGAACCTGGGCCGGGTGTTGCACCTGGAAGAACCCCCGATTTCCTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS GCA 90 bp AGTGTGCCAGCCCACGCCCTGTTACCCATCCGCAGCCGAGTGCCCTaGCTCTTACATCAACATTCGGTTCACATCGGCCGATTCACACAC +
Preference number: 5 (lower is better)
Translates to: SVPAHALLPIRSRVP*LLHQHSVHIGRFTH
Trigger: GTGTGTGAATCGGCCGATGTGAACCGAATGTTGATGTAAGAGGCAGGGCACTCGGCTGCGGATGGGTAACAGGGCGTGGGCTGGCACACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465984.5
ENST00000468221.5
ENST00000473367.5
CDS CCA 90 bp AGCAGCTGTTCTCTGCCTGGCCTGAAGAGTTGGGGTACACTGGGGTaGTACCGTCCAGCTGAGAGCAGATTGAATGCAATGGCCGTGCCG +
Preference number: 5 (lower is better)
Translates to: SSCSLPGLKSWGTLG*YRPAESRLNAMAVP
Trigger: CGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGGACGGTACCACCCCAGTGTACCCCAACTCTTCAGGCCAGGCAGAGAACAGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000465984.5
ENST00000469449.1
ENST00000469799.5
ENST00000475225.5
ENST00000483487.2
ENST00000492413.5
CDS-3UTR CAA 90 bp CCCCAGGAAATCGGGGGTTCTTCCAGGTGCAACACCCGGCCCAGGTTCAACTCTTCGTGGAGGCTGCTGTaGGCACAGATGTTGAACGCA +
Preference number: 5 (lower is better)
Translates to: PQEIGGSSRCNTRPRFNSSWRLL*AQMLNA
Trigger: TGCGTTCAACATCTGTGCCAACAGCAGCCTCCACGA...AGAGTTGAACCTGGGCCGGGTGTTGCACCTGGAAGAACCCCCGATTTCCTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CAA 90 bp GTAAATGTCCACGGCCACGGTGGCGTTGTTCATGGGGAAGATCTTGGCGTAGTCCTCGGGAGGCTGAAGTaGAGGCTGCAGCGAGCTGTG +
Preference number: 5 (lower is better)
Translates to: VNVHGHGGVVHGEDLGVVLGRLK*RLQRAV
Trigger: CACAGCTCGCTGCAGCCTCAACTTCAGCCTCCCGAG...GACTACGCCAAGATCTTCCCCATGAACAACGCCACCGTGGCCGTGGACATTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539932.5
CDS TCA 90 bp GCCTGGCCTGAAGAGTTGGGGTACACTGGGGTGGTACCGTCCAGCTaGGAGCAGATTGAATGCAATGGCCGTGCCGATGACTTCCTGCAT +
Preference number: 5 (lower is better)
Translates to: AWPEELGYTGVVPSS*EQIECNGRADDFLH
Trigger: ATGCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGGACGGTACCACCCCAGTGTACCCCAACTCTTCAGGCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000465984.5
ENST00000469449.1
ENST00000469799.5
ENST00000475225.5
ENST00000483487.2
ENST00000492413.5
CDS TCA 90 bp CTACACACTGGCGGGATTTGGCAAGAGCTGAGTCTGAGGCGAGAGTaGGGCGCTCAGGCTCTAGAAACAGCCCTCTTCCCTGGATTCCAG +
Preference number: 5 (lower is better)
Translates to: LHTGGIWQELSLRRE*GAQALETALFPGFQ
Trigger: CTGGAATCCAGGGAAGAGGGCTGTTTCTAGAGCCTGAGCGCCTCACTCTCGCCTCAGACTCAGCTCTTGCCAAATCCCGCCAGTGTGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490536.1
CDS CCA 90 bp AAACATTTTCCAAAGGCAGAAGTGGCCAGCCCTGGCGGAAGGGTCTaGTTACCCATGGAGTGGACCTTTGTTCCCCTCCCAGCCTGCCCT +
Preference number: 5 (lower is better)
Translates to: KHFPKAEVASPGGRV*LPMEWTFVPLPACP
Trigger: AGGGCAGGCTGGGAGGGGAACAAAGGTCCACTCCATGGGTAACCAGACCCTTCCGCCAGGGCTGGCCACTTCTGCCTTTGGAAAATGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468221.5
CDS-3UTR CAA 90 bp TGGCTGGTCTCAGGAACTGTCCCACTCTATCCTGCTGCCTGCACGCGCCCCCTCCCTTGTCACCTGTCATaGAAATGCCGACTTCAGGTA +
Preference number: 5 (lower is better)
Translates to: WLVSGTVPLYPAACTRPLPCHLS*KCRLQV
Trigger: TACCTGAAGTCGGCATTTCAATGACAGGTGACAAGG...GAGGGGGCGCGTGCAGGCAGCAGGATAGAGTGGGACAGTTCCTGAGACCAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000233202.11
ENST00000354352.9
CDS-3UTR CAA 90 bp TGGTGGTGGGAGCTGTGGGCCAGAAAGGTGGCTCCGTGGGCAAGGCAACAGGTCCCTTGTCACCTGTCATaGAAATGCCGACTTCAGGTA +
Preference number: 5 (lower is better)
Translates to: WWWELWARKVAPWARQQVPCHLS*KCRLQV
Trigger: TACCTGAAGTCGGCATTTCAATGACAGGTGACAAGG...GACCTGTTGCCTTGCCCACGGAGCCACCTTTCTGGCCCACAGCTCCCACCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR CAA 90 bp ATTCGTCCAGCTGAGAGCAGATTGAATGCAATGGCCGTGCCGATGACTTCCTGCACCTCGCCCAAGTCCTaGCCTGTCACCACGCCCAGA +
Preference number: 5 (lower is better)
Translates to: IRPAESRLNAMAVPMTSCTSPKS*PVTTPR
Trigger: TCTGGGCGTGGTGACAGGCAAGGACTTGGGCGAGGT...GCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGGACGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354352.9
ENST00000481524.5
ENST00000539932.5
CDS-3UTR CAA 90 bp CGCAGCCTGGTTGGTTTTCTGGTAGAAGGCCTGCCCAAAGACAGCCATGACAAAACCTCGCCCAAGTCCTaGCCTGTCACCACGCCCAGA +
Preference number: 5 (lower is better)
Translates to: RSLVGFLVEGLPKDSHDKTSPKS*PVTTPR
Trigger: TCTGGGCGTGGTGACAGGCAAGGACTTGGGCGAGGT...TTTGTCATGGCTGTCTTTGGGCAGGCCTTCTACCAGAAAACCAACCAGGCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR CAA 90 bp CGAGTGCAGGTAGATGTTGTGGGGCATGATGATGGCGCCAACAATGCCCACCGCGAAGAGGTGACGACCTaGTTCAGCAGGCCATTGGCA +
Preference number: 5 (lower is better)
Translates to: RVQVDVVGHDDGANNAHREEVTT*FSRPLA
Trigger: TGCCAATGGCCTGCTGAACAAGGTCGTCACCTCTTC...GCGGTGGGCATTGTTGGCGCCATCATCATGCCCCACAACATCTACCTGCACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR CAA 90 bp TGGCTGGTCTCAGGAACTGTCCCACTCTATCCTGCTGCCTGCACGCGCCCCCTCGAAACAGCAAATAATTaGGGCCTCAGAGGCACAGAC +
Preference number: 5 (lower is better)
Translates to: WLVSGTVPLYPAACTRPLETANN*GLRGTD
Trigger: GTCTGTGCCTCTGAGGCCCAAATTATTTGCTGTTTC...GAGGGGGCGCGTGCAGGCAGCAGGATAGAGTGGGACAGTTCCTGAGACCAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CAA 90 bp CTGGGCGACGGAGCGAGACTCCGACTTAGGGTAGTAGAGATGGCAGACCTCGCCTCGATGTTTCCGGTTTaGTGTCTGGGATGGGGATCT +
Preference number: 5 (lower is better)
Translates to: LGDGARLRLRVVEMADLASMFPV*CLGWGS
Trigger: AGATCCCCATCCCAGACACAAAACCGGAAACATCGA...GGCGAGGTCTGCCATCTCTACTACCCTAAGTCGGAGTCTCGCTCCGTCGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473367.5
CDS CCA 90 bp CCACATTGGAGAAACATGGCCAGCAGGGGCCTTCAACACTTAGCCTaGTCACCTCCCTCTCGAAAGTGTCCCCACTCAGGTCCCGACTTA +
Preference number: 5 (lower is better)
Translates to: PHWRNMASRGLQHLA*SPPSRKCPHSGPDL
Trigger: TAAGTCGGGACCTGAGTGGGGACACTTTCGAGAGGGAGGTGACCAGGCTAAGTGTTGAAGGCCCCTGCTGGCCATGTTTCTCCAATGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468221.5
CDS CCA 90 bp GAGGCGAGAGTGAGGCGCTCAGGCTCTAGAAACAGCCCTCTTCCCTaGATTCCAGTCTTGGCTCCTCAACTTGCTAGCTGTGTGAACCTG +
Preference number: 5 (lower is better)
Translates to: EARVRRSGSRNSPLP*IPVLAPQLASCVNL
Trigger: CAGGTTCACACAGCTAGCAAGTTGAGGAGCCAAGACTGGAATCCAGGGAAGAGGGCTGTTTCTAGAGCCTGAGCGCCTCACTCTCGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490536.1
CDS-3UTR CAA 90 bp GGGATTCGTCCAGCTGAGAGCAGATTGAATGCAATGGCCGTGCCGATGACTTCCCCAGCTGAGAGCAGATaGAATGCAATGGCCGTGCCG +
Preference number: 5 (lower is better)
Translates to: GIRPAESRLNAMAVPMTSPAESR*NAMAVP
Trigger: CGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGG...GGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGGACGAATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354352.9
ENST00000481524.5
ENST00000539932.5
CDS-3UTR CAA 90 bp GCCCCCTCCACATCCAGCAGGCCAGTCACGTCATACATGCCACTCCCAGCCAGGATCAGGAAGTACATGTaGGCTTCTCTGATGTCTGCT +
Preference number: 5 (lower is better)
Translates to: APSTSSRPVTSYMPLPARIRKYM*ASLMSA
Trigger: AGCAGACATCAGAGAAGCCAACATGTACTTCCTGAT...CCTGGCTGGGAGTGGCATGTATGACGTGACTGGCCTGCTGGATGTGGAGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000233202.11
ENST00000354352.9
CDS-3UTR CAA 90 bp TGGCTGGTCTCAGGAACTGTCCCACTCTATCCTGCTGCCTGCACGCGCCCCCTCATCAGGAAGTACATGTaGGCTTCTCTGATGTCTGCT +
Preference number: 5 (lower is better)
Translates to: WLVSGTVPLYPAACTRPLIRKYM*ASLMSA
Trigger: AGCAGACATCAGAGAAGCCAACATGTACTTCCTGAT...GAGGGGGCGCGTGCAGGCAGCAGGATAGAGTGGGACAGTTCCTGAGACCAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000233202.11
ENST00000354352.9
CDS-3UTR CAA 90 bp CGTCCAGCTGAGAGCAGATTGAATGCAATGGCCGTGCCGATGACTTCCTGCATGAGGCTCTGCAGCACGTaGAGCAGATCATTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: RPAESRLNAMAVPMTSCMRLCST*SRSLRP
Trigger: GGGCCTCAATGATCTGCTCAACGTGCTGCAGAGCCT...CATGCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR CAA 90 bp CAGGTCCCGGAAGACAGCCACGAGCACGGTGGGCAGGATGGCGCAGGAGCGGGTATGTTTTTCGTTTGTTaGTTTTTGTCCCAAGTGCCA +
Preference number: 5 (lower is better)
Translates to: QVPEDSHEHGGQDGAGAGMFFVC*FLSQVP
Trigger: TGGCACTTGGGACAAAAACAAACAAACGAAAAACAT...ACCCGCTCCTGCGCCATCCTGCCCACCGTGCTCGTGGCTGTCTTCCGGGACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR CAA 90 bp GGCGACGGAGCGAGACTCCGACTTAGGGTAGTAGAGATGGCAGACCTCGCCCAACCTTGTCACCTGTCATaGAAATGCCGACTTCAGGTA +
Preference number: 5 (lower is better)
Translates to: GDGARLRLRVVEMADLAQPCHLS*KCRLQV
Trigger: TACCTGAAGTCGGCATTTCAATGACAGGTGACAAGG...TTGGGCGAGGTCTGCCATCTCTACTACCCTAAGTCGGAGTCTCGCTCCGTCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473367.5
CDS-3UTR CAA 90 bp CGCAGCCTGGTTGGTTTTCTGGTAGAAGGCCTGCCCAAAGACAGCCATGACAAACCAGCTGAGAGCAGATaGAATGCAATGGCCGTGCCG +
Preference number: 5 (lower is better)
Translates to: RSLVGFLVEGLPKDSHDKPAESR*NAMAVP
Trigger: CGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGG...TTTGTCATGGCTGTCTTTGGGCAGGCCTTCTACCAGAAAACCAACCAGGCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR CAA 90 bp ATCAGGAAGTACATGTTGGCTTCTCTGATGTCTGCTCGGCGGGCCCGGTCTATCTCGTGGAGGCTGCTGTaGGCACAGATGTTGAACGCA +
Preference number: 5 (lower is better)
Translates to: IRKYMLASLMSARRARSISWRLL*AQMLNA
Trigger: TGCGTTCAACATCTGTGCCAACAGCAGCCTCCACGA...GATAGACCGGGCCCGCCGAGCAGACATCAGAGAAGCCAACATGTACTTCCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR CAA 90 bp GGGATTCGTCCAGCTGAGAGCAGATTGAATGCAATGGCCGTGCCGATGACTTCCACGTTGAGCAGATCATaGAGGCCCGACAAGTCCCTC +
Preference number: 5 (lower is better)
Translates to: GIRPAESRLNAMAVPMTSTLSRS*RPDKSL
Trigger: GAGGGACTTGTCGGGCCTCAATGATCTGCTCAACGT...GGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGGACGAATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354352.9
CDS-3UTR CAA 90 bp GCGTGGGAGTCGCGGCCGCCGGCTCCCCTGAGGAAACAGCAAATAATTTGGGCCTTCGTTTGTTTGTTTTaGTCCCAAGTGCCAGACACT +
Preference number: 5 (lower is better)
Translates to: AWESRPPAPLRKQQIIWAFVCLF*SQVPDT
Trigger: AGTGTCTGGCACTTGGGACAAAAACAAACAAACGAA...GGCCCAAATTATTTGCTGTTTCCTCAGGGGAGCCGGCGGCCGCGACTCCCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CAA 90 bp GCCCCCTCCACATCCAGCAGGCCAGTCACGTCATACATGCCACTCCCAGCCAGGTTCGTTTGTTTGTTTTaGTCCCAAGTGCCAGACACT +
Preference number: 5 (lower is better)
Translates to: APSTSSRPVTSYMPLPARFVCLF*SQVPDT
Trigger: AGTGTCTGGCACTTGGGACAAAAACAAACAAACGAA...CCTGGCTGGGAGTGGCATGTATGACGTGACTGGCCTGCTGGATGTGGAGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000233202.11
ENST00000354352.9
CDS-3UTR CAA 90 bp GGTCGCACCAGACCGGTCCCATCTCTTCTCTCCTTGAGGGACCCACTCGCATCGAATAAAGAGAATCGCTaGAACCCAGAAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: GRTRPVPSLLSLRDPLASNKENR*NPEGGG
Trigger: ACCTCCACCTTCTGGGTTCAAGCGATTCTCTTTATT...CGATGCGAGTGGGTCCCTCAAGGAGAGAAGAGATGGGACCGGTCTGGTGCGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS TCA 90 bp TCAGGTCCCGACTTAGTTACTTTGAATCCCGCCACGGCGCCAGCCTaGAGATCTGACTCGATGTTTCCTGGGTCCAGGAAAGCAATGCTC +
Preference number: 5 (lower is better)
Translates to: SGPDLVTLNPATAPA*RSDSMFPGSRKAML
Trigger: GAGCATTGCTTTCCTGGACCCAGGAAACATCGAGTCAGATCTTCAGGCTGGCGCCGTGGCGGGATTCAAAGTAACTAAGTCGGGACCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468221.5
CDS GCA 90 bp GCCAGCCTGCAGCCTCCTTCACTTCTCCCTATGCCCTTTCCTAAATaGTATAACATGTCCTCAAGGCTCCAATCCCAATTCCCCCTGGGC +
Preference number: 5 (lower is better)
Translates to: ASLQPPSLLPMPFPK*YNMSSRLQSQFPLG
Trigger: GCCCAGGGGGAATTGGGATTGGAGCCTTGAGGACATGTTATAGCATTTAGGAAAGGGCATAGGGAGAAGTGAAGGAGGCTGCAGGCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468221.5
CDS CCA 90 bp CCTTTTCGGGCCCATTTGAACTTAACACCAGCTCCCAGGCCACATTaGAGAAACATGGCCAGCAGGGGCCTTCAACACTTAGCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: PFRAHLNLTPAPRPH*RNMASRGLQHLAWS
Trigger: TGACCAGGCTAAGTGTTGAAGGCCCCTGCTGGCCATGTTTCTCCAATGTGGCCTGGGAGCTGGTGTTAAGTTCAAATGGGCCCGAAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468221.5
CDS-3UTR CAA 90 bp CGCCACCACATACTCATAGCCAAAGGTCAAGGCCATAATGGTTATAAGGAGTCCCCGGAGATCGCGCCATaGCACTCCAGCCTCCATCAC +
Preference number: 5 (lower is better)
Translates to: RHHILIAKGQGHNGYKESPEIAP*HSSLHH
Trigger: GTGATGGAGGCTGGAGTGCAATGGCGCGATCTCCGG...GGACTCCTTATAACCATTATGGCCTTGACCTTTGGCTATGAGTATGTGGTGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539932.5
CDS GCA 90 bp GGAGAGATCCTCTGTAGTCCCTCAACCGATTTATCCCTGGGGGCATaGTCTGTTTTTCCACTGTTGAACTGGGACAGCTCTGTCCCTAGG +
Preference number: 5 (lower is better)
Translates to: GEILCSPSTDLSLGA*SVFPLLNWDSSVPR
Trigger: CCTAGGGACAGAGCTGTCCCAGTTCAACAGTGGAAAAACAGAGCATGCCCCCAGGGATAAATCGGTTGAGGGACTACAGAGGATCTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000468221.5
ENST00000490536.1
CDS-3UTR CAA 90 bp GAGCAGATTGAATGCAATGGCCGTGCCGATGACTTCCTGCATGTCGGAGCCCACGCCATGACAAAGAGGTaGATGATAAAGGAGACGGAC +
Preference number: 5 (lower is better)
Translates to: EQIECNGRADDFLHVGAHAMTKR*MIKETD
Trigger: GTCCGTCTCCTTTATCATCAACCTCTTTGTCATGGC...GTGGGCTCCGACATGCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR CAA 90 bp GAGCAGATTGAATGCAATGGCCGTGCCGATGACTTCCTGCATGTCGGAGCCCACATCAGGAAGTACATGTaGGCTTCTCTGATGTCTGCT +
Preference number: 5 (lower is better)
Translates to: EQIECNGRADDFLHVGAHIRKYM*ASLMSA
Trigger: AGCAGACATCAGAGAAGCCAACATGTACTTCCTGAT...GTGGGCTCCGACATGCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR CAA 90 bp GTGGGAGTCGCGGCCGCCGGCTCCCCTGAGGAAACAGCAAATAATTTGGGCCTCATGTTTTTCGTTTGTTaGTTTTTGTCCCAAGTGCCA +
Preference number: 5 (lower is better)
Translates to: VGVAAAGSPEETANNLGLMFFVC*FLSQVP
Trigger: TGGCACTTGGGACAAAAACAAACAAACGAAAAACAT...GAGGCCCAAATTATTTGCTGTTTCCTCAGGGGAGCCGGCGGCCGCGACTCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000233202.11
CDS-3UTR CAA 90 bp CCGCAGCCCGTAGTTATCGAGGAAGAGGAAGAAGAAGGTGTCCACGATGGTGATGAAGGTGCCCTGTCATaGAAATGCCGACTTCAGGTA +
Preference number: 5 (lower is better)
Translates to: PQPVVIEEEEEEGVHDGDEGALS*KCRLQV
Trigger: TACCTGAAGTCGGCATTTCAATGACAGGGCACCTTC...ATCACCATCGTGGACACCTTCTTCTTCCTCTTCCTCGATAACTACGGGCTGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539932.5
CDS-3UTR CAA 90 bp GGCGATGGTGGCCTCAATCAGGAAGTACATGTTGGCTTCTCTGATGTCTGCTCGGCCATGACAAAGAGGTaGATGATAAAGGAGACGGAC +
Preference number: 5 (lower is better)
Translates to: GDGGLNQEVHVGFSDVCSAMTKR*MIKETD
Trigger: GTCCGTCTCCTTTATCATCAACCTCTTTGTCATGGC...CGAGCAGACATCAGAGAAGCCAACATGTACTTCCTGATTGAGGCCACCATCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000539932.5
CDS-3UTR CAA 90 bp CCGCAGCCCGTAGTTATCGAGGAAGAGGAAGAAGAAGGTGTCCACGATGGTGATCCAGAGAAGCTGTCATaGAAATGCCGACTTCAGGTA +
Preference number: 5 (lower is better)
Translates to: PQPVVIEEEEEEGVHDGDPEKLS*KCRLQV
Trigger: TACCTGAAGTCGGCATTTCAATGACAGCTTCTCTGG...ATCACCATCGTGGACACCTTCTTCTTCCTCTTCCTCGATAACTACGGGCTGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481524.5
CDS-3UTR CAA 90 bp TTGTTTGTTTTTGTCCCAAGTGCCAGACACTGTGTTAAAGTGCTTAACCTCCATGCCATGACAAAGAGGTaGATGATAAAGGAGACGGAC +
Preference number: 5 (lower is better)
Translates to: LFVFVPSARHCVKVLNLHAMTKR*MIKETD
Trigger: GTCCGTCTCCTTTATCATCAACCTCTTTGTCATGGC...ATGGAGGTTAAGCACTTTAACACAGTGTCTGGCACTTGGGACAAAAACAAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000233202.11
ENST00000354352.9
CDS TCA 72 bp GGCGCAGGAGCGGGTGAGGAGGACACGGGCGAAGCGTaGCCACCGCAGCCTCAGGAAGCCCTGGGGTGGGGG +
Preference number: 6 (lower is better)
Translates to: GAGAGEEDTGEA*PPQPQEALGWG
Trigger: CCCCCACCCCAGGGCTTCCTGAGGCTGCGGTGGTCACGCTTCGCCCGTGTCCTCCTCACCCGCTCCTGCGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000468221.5
ENST00000468721.1
ENST00000490536.1
CDS CCA 72 bp CTCAGGACGCGCCACCACATACTGCAGGGAGGAGCCTaGTCAGGACAAGCCCCGCCCCTCGCAACCACGCCG +
Preference number: 6 (lower is better)
Translates to: LRTRHHILQGGA*SGQAPPLATTP
Trigger: CGGCGTGGTTGCGAGGGGCGGGGCTTGTCCTGACCAGGCTCCTCCCTGCAGTATGTGGTGGCGCGTCCTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469449.1
CDS GCA 72 bp AGAAGCGCTCCCTGCTCAGGACGCGCCACCACATACTaGAGGGAGGAGCCTGGTCAGGACAAGCCCCGCCCC +
Preference number: 6 (lower is better)
Translates to: RSAPCSGRATTY*REEPGQDKPRP
Trigger: GGGGCGGGGCTTGTCCTGACCAGGCTCCTCCCTGCAGTATGTGGTGGCGCGTCCTGAGCAGGGAGCGCTTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469449.1
CDS CCA 72 bp TGGGAGGTGCTTGCTGTGGCCCTGGGCTGGTCGGGCTaGTCGGGCTGGAGATGGAACCATAGCTGGACCCGC +
Preference number: 6 (lower is better)
Translates to: WEVLAVALGWSG*SGWRWNHSWTR
Trigger: GCGGGTCCAGCTATGGTTCCATCTCCAGCCCGACCAGCCCGACCAGCCCAGGGCCACAGCAAGCACCTCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233202.11
ENST00000354352.9
ENST00000465984.5
ENST00000468221.5
ENST00000473367.5
ENST00000475225.5
ENST00000492413.5
ENST00000494322.5
CDS GCA 72 bp CACGAGGGCAGGAACAGGCCCCGAAGAAGCGCTCCCTaGTCAGGACGCGCCACCACATACTGCAGGGAGGAG +
Preference number: 6 (lower is better)
Translates to: HEGRNRPRRSAP*SGRATTYCREE
Trigger: CTCCTCCCTGCAGTATGTGGTGGCGCGTCCTGAGCAGGGAGCGCTTCTTCGGGGCCTGTTCCTGCCCTCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469449.1
CDS CCA 72 bp GTGGCCCTGGGCTGGTCGGGCTGGTCGGGCTGGAGATaGAACCATAGCTGGACCCGCTTAGCCTTTGGGGAC +
Preference number: 6 (lower is better)
Translates to: VALGWSGWSGWR*NHSWTRLAFGD
Trigger: GTCCCCAAAGGCTAAGCGGGTCCAGCTATGGTTCCATCTCCAGCCCGACCAGCCCGACCAGCCCAGGGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233202.11
ENST00000354352.9
ENST00000465984.5
ENST00000468221.5
ENST00000473367.5
ENST00000475225.5
ENST00000492413.5
ENST00000494322.5
CDS CCA 72 bp CAGGTAGGTCTCTCTGGGAGGTGCTTGCTGTGGCCCTaGGCTGGTCGGGCTGGTCGGGCTGGAGATGGAACC +
Preference number: 6 (lower is better)
Translates to: QVGLSGRCLLWP*AGRAGRAGDGT
Trigger: GGTTCCATCTCCAGCCCGACCAGCCCGACCAGCCCAGGGCCACAGCAAGCACCTCCCAGAGAGACCTACCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233202.11
ENST00000354352.9
ENST00000465984.5
ENST00000468221.5
ENST00000473367.5
ENST00000475225.5
ENST00000492413.5
ENST00000494322.5
CDS CCA 72 bp GCCAGCCCTGGCGGAAGGGTCTGGTTACCCATGGAGTaGACCTTTGTTCCCCTCCCAGCCTGCCCTGTGCCC +
Preference number: 6 (lower is better)
Translates to: ASPGGRVWLPME*TFVPLPACPVP
Trigger: GGGCACAGGGCAGGCTGGGAGGGGAACAAAGGTCCACTCCATGGGTAACCAGACCCTTCCGCCAGGGCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468221.5
CDS CCA 72 bp CGGAGCCTCAGGGCTGGAGACAGGAATCTGGCCTCCTaGGAGCAGGACCCTAAGCGCCCCCAGACAGCTAGG +
Preference number: 6 (lower is better)
Translates to: RSLRAGDRNLAS*EQDPKRPQTAR
Trigger: CCTAGCTGTCTGGGGGCGCTTAGGGTCCTGCTCCCAGGAGGCCAGATTCCTGTCTCCAGCCCTGAGGCTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000465984.5
ENST00000469449.1
ENST00000469799.5
ENST00000475225.5
ENST00000492413.5
CDS GCA 72 bp GGGGATCTTCTCACTCAGGTAGGTCTCTCTGGGAGGTaGTTGCTGTGGCCCTGGGCTGGTCGGGCTGGTCGG +
Preference number: 6 (lower is better)
Translates to: GDLLTQVGLSGR*LLWPWAGRAGR
Trigger: CCGACCAGCCCGACCAGCCCAGGGCCACAGCAAGCACCTCCCAGAGAGACCTACCTGAGTGAGAAGATCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233202.11
ENST00000354352.9
ENST00000465984.5
ENST00000468221.5
ENST00000473367.5
ENST00000492413.5
ENST00000494322.5
CDS CCA 72 bp AGGTCTCTCTGGGAGGTGCTTGCTGTGGCCCTGGGCTaGTCGGGCTGGTCGGGCTGGAGATGGAACCATAGC +
Preference number: 6 (lower is better)
Translates to: RSLWEVLAVALG*SGWSGWRWNHS
Trigger: GCTATGGTTCCATCTCCAGCCCGACCAGCCCGACCAGCCCAGGGCCACAGCAAGCACCTCCCAGAGAGACCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233202.11
ENST00000354352.9
ENST00000465984.5
ENST00000468221.5
ENST00000473367.5
ENST00000475225.5
ENST00000492413.5
ENST00000494322.5
CDS CCA 72 bp CTCACTCAGGTAGGTCTCTCTGGGAGGTGCTTGCTGTaGCCCTGGGCTGGTCGGGCTGGTCGGGCTGGAGAT +
Preference number: 6 (lower is better)
Translates to: LTQVGLSGRCLL*PWAGRAGRAGD
Trigger: ATCTCCAGCCCGACCAGCCCGACCAGCCCAGGGCCACAGCAAGCACCTCCCAGAGAGACCTACCTGAGTGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233202.11
ENST00000354352.9
ENST00000465984.5
ENST00000468221.5
ENST00000473367.5
ENST00000492413.5
ENST00000494322.5
CDS CCA 72 bp CTTCCTGCATGTCGGAGCCCACAATGGCTAGCTCGATaGTCAGCCAGAGGACGGTGCGGGGCACCTGGGAGG +
Preference number: 6 (lower is better)
Translates to: LPACRSPQWLAR*SARGRCGAPGR
Trigger: CCTCCCAGGTGCCCCGCACCGTCCTCTGGCTGACCATCGAGCTAGCCATTGTGGGCTCCGACATGCAGGAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354352.9
ENST00000469449.1
CDS CCA 72 bp GAACAGTCGAGGCAGGGCAGAGCTAGAGGAGAGACCTaGCACCCGGCGCAGCAGGGAGTTTGGGGCTGCAGT +
Preference number: 6 (lower is better)
Translates to: EQSRQGRARGET*HPAQQGVWGCS
Trigger: ACTGCAGCCCCAAACTCCCTGCTGCGCCGGGTGCCAGGTCTCTCCTCTAGCTCTGCCCTGCCTCGACTGTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000465984.5
ENST00000469449.1
ENST00000469799.5
ENST00000475225.5
ENST00000492413.5
CDS CAA 72 bp GCCTCCTGGGCCCTCCAGGCTACACACTGGCGGGATTaGGCAAGAGCTGAGTCTGAGGCGAGAGTGAGGCGC +
Preference number: 6 (lower is better)
Translates to: ASWALQATHWRD*ARAESEARVRR
Trigger: GCGCCTCACTCTCGCCTCAGACTCAGCTCTTGCCAAATCCCGCCAGTGTGTAGCCTGGAGGGCCCAGGAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490536.1
CDS CAA 90 bp CCACCTCCTGCCTCCTGGGCCCTCCAGGCTACACACTGGCGGGATTaGGCAAGAGCTGAGTCTGAGGCGAGAGTGAGGCGCTCAGGCTCT +
Preference number: 6 (lower is better)
Translates to: PPPASWALQATHWRD*ARAESEARVRRSGS
Trigger: AGAGCCTGAGCGCCTCACTCTCGCCTCAGACTCAGCTCTTGCCAAATCCCGCCAGTGTGTAGCCTGGAGGGCCCAGGAGGCAGGAGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490536.1
CDS CCA 72 bp CTGGGATGGGGATCTTCTCACTCAGGTAGGTCTCTCTaGGAGGTGCTTGCTGTGGCCCTGGGCTGGTCGGGC +
Preference number: 6 (lower is better)
Translates to: LGWGSSHSGRSL*EVLAVALGWSG
Trigger: GCCCGACCAGCCCAGGGCCACAGCAAGCACCTCCCAGAGAGACCTACCTGAGTGAGAAGATCCCCATCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233202.11
ENST00000354352.9
ENST00000465984.5
ENST00000468221.5
ENST00000473367.5
ENST00000492413.5
ENST00000494322.5
CDS CCA 72 bp AAGTGGCCAGCCCTGGCGGAAGGGTCTGGTTACCCATaGAGTGGACCTTTGTTCCCCTCCCAGCCTGCCCTG +
Preference number: 6 (lower is better)
Translates to: KWPALAEGSGYP*SGPLFPSQPAL
Trigger: CAGGGCAGGCTGGGAGGGGAACAAAGGTCCACTCCATGGGTAACCAGACCCTTCCGCCAGGGCTGGCCACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468221.5
CDS CCA 72 bp AACTCCTACGGAGCCTCAGGGCTGGAGACAGGAATCTaGCCTCCTGGGAGCAGGACCCTAAGCGCCCCCAGA +
Preference number: 6 (lower is better)
Translates to: NSYGASGLETGI*PPGSRTLSAPR
Trigger: TCTGGGGGCGCTTAGGGTCCTGCTCCCAGGAGGCCAGATTCCTGTCTCCAGCCCTGAGGCTCCGTAGGAGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000465984.5
ENST00000469449.1
ENST00000469799.5
ENST00000475225.5
ENST00000492413.5
CDS CCA 72 bp GTTTCTCAGGTAGGTCTCTCTGGGAGGTGCTTGCTGTaGCCCTGGGCTGGTCGGGCTGGTCGGGCTGGAGAT +
Preference number: 6 (lower is better)
Translates to: VSQVGLSGRCLL*PWAGRAGRAGD
Trigger: ATCTCCAGCCCGACCAGCCCGACCAGCCCAGGGCCACAGCAAGCACCTCCCAGAGAGACCTACCTGAGAAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475225.5
CDS CAA 72 bp GCAGCCCGCGGCCAGAGGGAAGGGAGAGGAATGATCTaGGGAGGTCCACAGTGGGGTTGCAGCACTGGCTTC +
Preference number: 6 (lower is better)
Translates to: AARGQREGRGMI*GGPQWGCSTGF
Trigger: GAAGCCAGTGCTGCAACCCCACTGTGGACCTCCCAAGATCATTCCTCTCCCTTCCCTCTGGCCGCGGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469449.1
CDS CAA 90 bp TGGGATGGGGATCTTCTCACTCAGGTAGGTCTCTCTGGGAGGTGCTaGCTGTGGCCCTGGGCTGGTCGGGCTGGTCGGGCTGGAGATGGA +
Preference number: 6 (lower is better)
Translates to: WDGDLLTQVGLSGRC*LWPWAGRAGRAGDG
Trigger: TCCATCTCCAGCCCGACCAGCCCGACCAGCCCAGGGCCACAGCAAGCACCTCCCAGAGAGACCTACCTGAGTGAGAAGATCCCCATCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233202.11
ENST00000354352.9
ENST00000465984.5
ENST00000468221.5
ENST00000473367.5
ENST00000492413.5
ENST00000494322.5
CDS CAA 90 bp TGGCCAGCCCTGGCGGAAGGGTCTGGTTACCCATGGAGTGGACCTTaGTTCCCCTCCCAGCCTGCCCTGTGCCCCACAACACATCTGTTC +
Preference number: 6 (lower is better)
Translates to: WPALAEGSGYPWSGP*FPSQPALCPTTHLF
Trigger: GAACAGATGTGTTGTGGGGCACAGGGCAGGCTGGGAGGGGAACAAAGGTCCACTCCATGGGTAACCAGACCCTTCCGCCAGGGCTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468221.5
CDS GCA 72 bp GGGGGACACGAGAGAGGCTCAGGACTGGCTGGTTGCTaGTGGCCCACCTGCATCAACTCCTCTTCATCTCCC +
Preference number: 6 (lower is better)
Translates to: GGHERGSGLAGC*WPTCINSSSSP
Trigger: GGGAGATGAAGAGGAGTTGATGCAGGTGGGCCAGCAGCAACCAGCCAGTCCTGAGCCTCTCTCGTGTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490536.1
CDS CCA 72 bp TGGTCGGGCTGGTCGGGCTGGAGATGGAACCATAGCTaGACCCGCTTAGCCTTTGGGGACCCTTGTCACCTG +
Preference number: 6 (lower is better)
Translates to: WSGWSGWRWNHS*TRLAFGDPCHL
Trigger: CAGGTGACAAGGGTCCCCAAAGGCTAAGCGGGTCCAGCTATGGTTCCATCTCCAGCCCGACCAGCCCGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233202.11
ENST00000354352.9
ENST00000465984.5
ENST00000468221.5
ENST00000473367.5
ENST00000475225.5
ENST00000492413.5
ENST00000494322.5
CDS CCA 72 bp GCCAGAGAGGCCAGCCTCAGAAAGCCCCTGAGCTCGTaGTACCCTCTAACCAAGCATACTCCTCGGGGAGGG +
Preference number: 6 (lower is better)
Translates to: AREASLRKPLSS*YPLTKHTPRGG
Trigger: CCCTCCCCGAGGAGTATGCTTGGTTAGAGGGTACCACGAGCTCAGGGGCTTTCTGAGGCTGGCCTCTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468221.5
CDS CCA 72 bp ACCCTAAGCGCCCCCAGACAGCTAGGGCAAGGGGAGTaGGAGTGTGGCATAGAACAGTCGAGGCAGGGCAGA +
Preference number: 6 (lower is better)
Translates to: TLSAPRQLGQGE*ECGIEQSRQGR
Trigger: TCTGCCCTGCCTCGACTGTTCTATGCCACACTCCCACTCCCCTTGCCCTAGCTGTCTGGGGGCGCTTAGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000465984.5
ENST00000469449.1
ENST00000469799.5
ENST00000475225.5
ENST00000492413.5
CDS CAA 72 bp CTGGCGGAAGGGTCTGGTTACCCATGGAGTGGACCTTaGTTCCCCTCCCAGCCTGCCCTGTGCCCCACAACA +
Preference number: 6 (lower is better)
Translates to: LAEGSGYPWSGP*FPSQPALCPTT
Trigger: TGTTGTGGGGCACAGGGCAGGCTGGGAGGGGAACAAAGGTCCACTCCATGGGTAACCAGACCCTTCCGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468221.5
CDS GCA 72 bp GCCCACGCCCTGTTACCCATCCGCAGCCGAGTGCCCTaGCTCTTACATCAACATTCGGTTCACATCGGCCGA +
Preference number: 6 (lower is better)
Translates to: AHALLPIRSRVP*LLHQHSVHIGR
Trigger: TCGGCCGATGTGAACCGAATGTTGATGTAAGAGGCAGGGCACTCGGCTGCGGATGGGTAACAGGGCGTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465984.5
ENST00000468221.5
ENST00000473367.5
CDS GCA 72 bp GAGACCTGGCACCCGGCGCAGCAGGGAGTTTGGGGCTaGAGTCCCAAAGTCCTGCATGACTCACATCTGTGT +
Preference number: 6 (lower is better)
Translates to: ETWHPAQQGVWG*SPKVLHDSHLC
Trigger: ACACAGATGTGAGTCATGCAGGACTTTGGGACTGCAGCCCCAAACTCCCTGCTGCGCCGGGTGCCAGGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000465984.5
ENST00000469449.1
ENST00000469799.5
ENST00000475225.5
ENST00000492413.5
CDS GCA 72 bp AGAGGCTCAGGACTGGCTGGTTGCTGCTGGCCCACCTaGATCAACTCCTCTTCATCTCCCAGCGCCCACACT +
Preference number: 6 (lower is better)
Translates to: RGSGLAGCCWPT*INSSSSPSAHT
Trigger: AGTGTGGGCGCTGGGAGATGAAGAGGAGTTGATGCAGGTGGGCCAGCAGCAACCAGCCAGTCCTGAGCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490536.1
CDS CCA 72 bp CCAAAGGCAGAAGTGGCCAGCCCTGGCGGAAGGGTCTaGTTACCCATGGAGTGGACCTTTGTTCCCCTCCCA +
Preference number: 6 (lower is better)
Translates to: PKAEVASPGGRV*LPMEWTFVPLP
Trigger: TGGGAGGGGAACAAAGGTCCACTCCATGGGTAACCAGACCCTTCCGCCAGGGCTGGCCACTTCTGCCTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468221.5
CDS CCA 72 bp AGAGGAGAGACCTGGCACCCGGCGCAGCAGGGAGTTTaGGGCTGCAGTCCCAAAGTCCTGCATGACTCACAT +
Preference number: 6 (lower is better)
Translates to: RGETWHPAQQGV*GCSPKVLHDSH
Trigger: ATGTGAGTCATGCAGGACTTTGGGACTGCAGCCCCAAACTCCCTGCTGCGCCGGGTGCCAGGTCTCTCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000465984.5
ENST00000469449.1
ENST00000469799.5
ENST00000475225.5
ENST00000492413.5
CDS CCA 72 bp CTGCATCAACTCCTCTTCATCTCCCAGCGCCCACACTaGGGGTGGGGATACACTGAGGCCGCTTCTCTGGTC +
Preference number: 6 (lower is better)
Translates to: LHQLLFISQRPH*GWGYTEAASLV
Trigger: GACCAGAGAAGCGGCCTCAGTGTATCCCCACCCCCAGTGTGGGCGCTGGGAGATGAAGAGGAGTTGATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490536.1
CDS CCA 72 bp GGACACGAGAGAGGCTCAGGACTGGCTGGTTGCTGCTaGCCCACCTGCATCAACTCCTCTTCATCTCCCAGC +
Preference number: 6 (lower is better)
Translates to: GHERGSGLAGCC*PTCINSSSSPS
Trigger: GCTGGGAGATGAAGAGGAGTTGATGCAGGTGGGCCAGCAGCAACCAGCCAGTCCTGAGCCTCTCTCGTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490536.1
CDS CAA 90 bp CCCACCTTCTGGCAGGGCTGCCCTGGGGACCCTTTTCGGGCCCATTaGAACTTAACACCAGCTCCCAGGCCACATTGGAGAAACATGGCC +
Preference number: 6 (lower is better)
Translates to: PTFWQGCPGDPFRAH*NLTPAPRPHWRNMA
Trigger: GGCCATGTTTCTCCAATGTGGCCTGGGAGCTGGTGTTAAGTTCAAATGGGCCCGAAAAGGGTCCCCAGGGCAGCCCTGCCAGAAGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468221.5
CDS TCA 72 bp GGCGGGATTTGGCAAGAGCTGAGTCTGAGGCGAGAGTaGGGCGCTCAGGCTCTAGAAACAGCCCTCTTCCCT +
Preference number: 6 (lower is better)
Translates to: GGIWQELSLRRE*GAQALETALFP
Trigger: AGGGAAGAGGGCTGTTTCTAGAGCCTGAGCGCCTCACTCTCGCCTCAGACTCAGCTCTTGCCAAATCCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490536.1
CDS GCA 72 bp TGCCAGCCCACGCCCTGTTACCCATCCGCAGCCGAGTaGCCTGCCTCTTACATCAACATTCGGTTCACATCG +
Preference number: 6 (lower is better)
Translates to: CQPTPCYPSAAE*PASYINIRFTS
Trigger: CGATGTGAACCGAATGTTGATGTAAGAGGCAGGGCACTCGGCTGCGGATGGGTAACAGGGCGTGGGCTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465984.5
ENST00000468221.5
ENST00000473367.5
CDS CCA 72 bp AGTAGCAGCAGCTGTTCTCTGCCTGGCCTGAAGAGTTaGGGTACACTGGGGTGGTACCGTCCAGCTGAGAGC +
Preference number: 6 (lower is better)
Translates to: SSSSCSLPGLKS*GTLGWYRPAES
Trigger: GCTCTCAGCTGGACGGTACCACCCCAGTGTACCCCAACTCTTCAGGCCAGGCAGAGAACAGCTGCTGCTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000465984.5
ENST00000469449.1
ENST00000469799.5
ENST00000475225.5
ENST00000483487.2
ENST00000492413.5
CDS CCA 72 bp GAAGATCTGACTCGATGTTTCTCAGGTAGGTCTCTCTaGGAGGTGCTTGCTGTGGCCCTGGGCTGGTCGGGC +
Preference number: 6 (lower is better)
Translates to: EDLTRCFSGRSL*EVLAVALGWSG
Trigger: GCCCGACCAGCCCAGGGCCACAGCAAGCACCTCCCAGAGAGACCTACCTGAGAAACATCGAGTCAGATCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475225.5
CDS CAA 72 bp TGGCAGGGCTGCCCTGGGGACCCTTTTCGGGCCCATTaGAACTTAACACCAGCTCCCAGGCCACATTGGAGA +
Preference number: 6 (lower is better)
Translates to: WQGCPGDPFRAH*NLTPAPRPHWR
Trigger: TCTCCAATGTGGCCTGGGAGCTGGTGTTAAGTTCAAATGGGCCCGAAAAGGGTCCCCAGGGCAGCCCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468221.5
CDS CAA 90 bp GGCAGTTGCCACTGTCCACCACTGCTGCTCAGACCTGGAAGGGACTaGCCACCCATGATCATAAGGAGACCCCATTCTCCAGCCCATGGG +
Preference number: 6 (lower is better)
Translates to: GSCHCPPLLLRPGRD*PPMIIRRPHSPAHG
Trigger: CCCATGGGCTGGAGAATGGGGTCTCCTTATGATCATGGGTGGCAAGTCCCTTCCAGGTCTGAGCAGCAGTGGTGGACAGTGGCAACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468221.5
CDS CAA 90 bp AAGAGTTGGGGTACACTGGGGTGGTACCGTCCAGCTGAGAGCAGATaGAATGCAATGGCCGTGCCGATGACTTCCTGCATGTCGGAGCCC +
Preference number: 6 (lower is better)
Translates to: KSWGTLGWYRPAESR*NAMAVPMTSCMSEP
Trigger: GGGCTCCGACATGCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGGACGGTACCACCCCAGTGTACCCCAACTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000465984.5
ENST00000469449.1
ENST00000469799.5
ENST00000471875.5
ENST00000475225.5
ENST00000483487.2
ENST00000492413.5
CDS CAA 72 bp CTCCAGCCCATGGGATCCTTCAGGATCCTGTCAATCTaGCAAGCCCCCAGGAAGTTTCCAGCATCCCACCGG +
Preference number: 6 (lower is better)
Translates to: LQPMGSFRILSI*QAPRKFPASHR
Trigger: CCGGTGGGATGCTGGAAACTTCCTGGGGGCTTGCAAGATTGACAGGATCCTGAAGGATCCCATGGGCTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468221.5
CDS TCA 72 bp GAAGAGTTGGGGTACACTGGGGTGGTACCGTCCAGCTaGGAGCAGATTGAATGCAATGGCCGTGCCGATGAC +
Preference number: 6 (lower is better)
Translates to: EELGYTGVVPSS*EQIECNGRADD
Trigger: GTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGGACGGTACCACCCCAGTGTACCCCAACTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000465984.5
ENST00000469449.1
ENST00000469799.5
ENST00000471875.5
ENST00000475225.5
ENST00000483487.2
ENST00000492413.5
CDS TCA 72 bp GACCCCCATCTTTTGAATCCCGCCACGGCGCCAGCCTaGAGATCTGACTCGATGTTTCCTGGGTCCAGGAAA +
Preference number: 6 (lower is better)
Translates to: DPHLLNPATAPA*RSDSMFPGSRK
Trigger: TTTCCTGGACCCAGGAAACATCGAGTCAGATCTTCAGGCTGGCGCCGTGGCGGGATTCAAAAGATGGGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471875.5
CDS GCA 72 bp TCCAGCCCATGGGATCCTTCAGGATCCTGTCAATCTTaGAAGCCCCCAGGAAGTTTCCAGCATCCCACCGGT +
Preference number: 6 (lower is better)
Translates to: SSPWDPSGSCQS*KPPGSFQHPTG
Trigger: ACCGGTGGGATGCTGGAAACTTCCTGGGGGCTTGCAAGATTGACAGGATCCTGAAGGATCCCATGGGCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468221.5
CDS CCA 72 bp AGAAACATGGCCAGCAGGGGCCTTCAACACTTAGCCTaGTCACCTCCCTCTCGAAAGTGTCCCCACTCAGGT +
Preference number: 6 (lower is better)
Translates to: RNMASRGLQHLA*SPPSRKCPHSG
Trigger: ACCTGAGTGGGGACACTTTCGAGAGGGAGGTGACCAGGCTAAGTGTTGAAGGCCCCTGCTGGCCATGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468221.5
CDS CAA 72 bp GGTACACTGGGGTGGTACCGTCCAGCTGAGAGCAGATaGAATGCAATGGCCGTGCCGATGACTTCCTGCATG +
Preference number: 6 (lower is better)
Translates to: GTLGWYRPAESR*NAMAVPMTSCM
Trigger: CATGCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGGACGGTACCACCCCAGTGTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000465984.5
ENST00000469449.1
ENST00000469799.5
ENST00000471875.5
ENST00000475225.5
ENST00000483487.2
ENST00000492413.5
CDS CAA 72 bp AATCCAGCACTTGGGAAAGGGGGTACTCACAGGCCATaGGCAAACTCCTGCATGAGGGTGGGCATGCTGGTG +
Preference number: 6 (lower is better)
Translates to: NPALGKGGTHRP*ANSCMRVGMLV
Trigger: CACCAGCATGCCCACCCTCATGCAGGAGTTTGCCAATGGCCTGTGAGTACCCCCTTTCCCAAGTGCTGGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490536.1
CDS CAA 90 bp CCCTTTTCGGGCCCATTTGAACTTAACACCAGCTCCCAGGCCACATaGGAGAAACATGGCCAGCAGGGGCCTTCAACACTTAGCCTGGTC +
Preference number: 6 (lower is better)
Translates to: PFSGPFELNTSSQAT*EKHGQQGPSTLSLV
Trigger: GACCAGGCTAAGTGTTGAAGGCCCCTGCTGGCCATGTTTCTCCAATGTGGCCTGGGAGCTGGTGTTAAGTTCAAATGGGCCCGAAAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468221.5
CDS TCA 72 bp ACCCAGAGAAGTTTGAATCCCGCCACGGCGCCAGCCTaGAGATCTGACTCGATGTTTCCTGGGTCCAGGAAA +
Preference number: 6 (lower is better)
Translates to: TQRSLNPATAPA*RSDSMFPGSRK
Trigger: TTTCCTGGACCCAGGAAACATCGAGTCAGATCTTCAGGCTGGCGCCGTGGCGGGATTCAAACTTCTCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233202.11
ENST00000354352.9
ENST00000469449.1
ENST00000483487.2
ENST00000492413.5
ENST00000494322.5
ENST00000539932.5
CDS TCA 72 bp AAGTTTGAATCCCGCCACGGCGCCAGCCTGAAGATCTaGCTCGATGTTTCCGGTTTTGTGTCTGGGATGGGG +
Preference number: 6 (lower is better)
Translates to: KFESRHGASLKI*LDVSGFVSGMG
Trigger: CCCCATCCCAGACACAAAACCGGAAACATCGAGTCAGATCTTCAGGCTGGCGCCGTGGCGGGATTCAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473367.5
CDS TCA 72 bp AAGTTTGAATCCCGCCACGGCGCCAGCCTGAAGATCTaGCTCGATGTTTCTCAGGTAGGTCTCTCTGGGAGG +
Preference number: 6 (lower is better)
Translates to: KFESRHGASLKI*LDVSQVGLSGR
Trigger: CCTCCCAGAGAGACCTACCTGAGAAACATCGAGTCAGATCTTCAGGCTGGCGCCGTGGCGGGATTCAAACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475225.5
CDS CCA 72 bp TCTCTGCCTGGCCTGAAGAGTTGGGGTACACTGGGGTaGTACCGTCCAGCTGAGAGCAGATTGAATGCAATG +
Preference number: 6 (lower is better)
Translates to: SLPGLKSWGTLG*YRPAESRLNAM
Trigger: CATTGCATTCAATCTGCTCTCAGCTGGACGGTACCACCCCAGTGTACCCCAACTCTTCAGGCCAGGCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000465984.5
ENST00000469449.1
ENST00000469799.5
ENST00000475225.5
ENST00000483487.2
ENST00000492413.5
CDS CCA 72 bp GTGAGGCGCTCAGGCTCTAGAAACAGCCCTCTTCCCTaGATTCCAGTCTTGGCTCCTCAACTTGCTAGCTGT +
Preference number: 6 (lower is better)
Translates to: VRRSGSRNSPLP*IPVLAPQLASC
Trigger: ACAGCTAGCAAGTTGAGGAGCCAAGACTGGAATCCAGGGAAGAGGGCTGTTTCTAGAGCCTGAGCGCCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490536.1
CDS CAA 72 bp CACTGTCCACCACTGCTGCTCAGACCTGGAAGGGACTaGCCACCCATGATCATAAGGAGACCCCATTCTCCA +
Preference number: 6 (lower is better)
Translates to: HCPPLLLRPGRD*PPMIIRRPHSP
Trigger: TGGAGAATGGGGTCTCCTTATGATCATGGGTGGCAAGTCCCTTCCAGGTCTGAGCAGCAGTGGTGGACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468221.5
CDS CAA 90 bp GTCAATCTTGCAAGCCCCCAGGAAGTTTCCAGCATCCCACCGGTTTaGTGTCTGGGATGGGGATCTTCTCACTCAGGTAGGTCTCTCTGG +
Preference number: 6 (lower is better)
Translates to: VNLASPQEVSSIPPV*CLGWGSSHSGRSLW
Trigger: CCAGAGAGACCTACCTGAGTGAGAAGATCCCCATCCCAGACACAAAACCGGTGGGATGCTGGAAACTTCCTGGGGGCTTGCAAGATTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468221.5
CDS TCA 72 bp AAGTTTGAATCCCGCCACGGCGCCAGCCTGAAGATCTaGCTCGATGTTTCCTGGGTCCAGGAAAGCAATGCT +
Preference number: 6 (lower is better)
Translates to: KFESRHGASLKI*LDVSWVQESNA
Trigger: AGCATTGCTTTCCTGGACCCAGGAAACATCGAGTCAGATCTTCAGGCTGGCGCCGTGGCGGGATTCAAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233202.11
ENST00000354352.9
ENST00000469449.1
ENST00000483487.2
ENST00000492413.5
ENST00000494322.5
ENST00000539932.5
CDS TCA 72 bp TACTTTGAATCCCGCCACGGCGCCAGCCTGAAGATCTaGCTCGATGTTTCCTGGGTCCAGGAAAGCAATGCT +
Preference number: 6 (lower is better)
Translates to: YFESRHGASLKI*LDVSWVQESNA
Trigger: AGCATTGCTTTCCTGGACCCAGGAAACATCGAGTCAGATCTTCAGGCTGGCGCCGTGGCGGGATTCAAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468221.5
CDS TCA 72 bp TCTTTTGAATCCCGCCACGGCGCCAGCCTGAAGATCTaGCTCGATGTTTCCTGGGTCCAGGAAAGCAATGCT +
Preference number: 6 (lower is better)
Translates to: SFESRHGASLKI*LDVSWVQESNA
Trigger: AGCATTGCTTTCCTGGACCCAGGAAACATCGAGTCAGATCTTCAGGCTGGCGCCGTGGCGGGATTCAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471875.5
CDS TCA 72 bp ACCCAGAGAAGTTTGAATCCCGCCACGGCGCCAGCCTaGAGATCTGACTCGATGTTTCCGGTTTTGTGTCTG +
Preference number: 6 (lower is better)
Translates to: TQRSLNPATAPA*RSDSMFPVLCL
Trigger: CAGACACAAAACCGGAAACATCGAGTCAGATCTTCAGGCTGGCGCCGTGGCGGGATTCAAACTTCTCTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473367.5
CDS TCA 72 bp CTCGTACCTCTGGGTGGCTGTGAGGATGAAATGTGGTaGTGCAATCCAGCACTTGGGAAAGGGGGTACTCAC +
Preference number: 6 (lower is better)
Translates to: LVPLGGCEDEMW*CNPALGKGGTH
Trigger: GTGAGTACCCCCTTTCCCAAGTGCTGGATTGCATCACCACATTTCATCCTCACAGCCACCCAGAGGTACGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490536.1
CDS CAA 72 bp GGCCCATTTGAACTTAACACCAGCTCCCAGGCCACATaGGAGAAACATGGCCAGCAGGGGCCTTCAACACTT +
Preference number: 6 (lower is better)
Translates to: GPFELNTSSQAT*EKHGQQGPSTL
Trigger: AAGTGTTGAAGGCCCCTGCTGGCCATGTTTCTCCAATGTGGCCTGGGAGCTGGTGTTAAGTTCAAATGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468221.5
CDS TCA 72 bp GACTTAGTTACTTTGAATCCCGCCACGGCGCCAGCCTaGAGATCTGACTCGATGTTTCCTGGGTCCAGGAAA +
Preference number: 6 (lower is better)
Translates to: DLVTLNPATAPA*RSDSMFPGSRK
Trigger: TTTCCTGGACCCAGGAAACATCGAGTCAGATCTTCAGGCTGGCGCCGTGGCGGGATTCAAAGTAACTAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468221.5
CDS GCA 72 bp CGCAGCAGGGAGTTTGGGGCTGCAGTCCCAAAGTCCTaGATGACTCACATCTGTGTGACTTTAGACAAGTCA +
Preference number: 6 (lower is better)
Translates to: RSREFGAAVPKS*MTHICVTLDKS
Trigger: TGACTTGTCTAAAGTCACACAGATGTGAGTCATGCAGGACTTTGGGACTGCAGCCCCAAACTCCCTGCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000465984.5
ENST00000469449.1
ENST00000469799.5
ENST00000475225.5
ENST00000492413.5
CDS CCA 72 bp ACCCATGATCATAAGGAGACCCCATTCTCCAGCCCATaGGATCCTTCAGGATCCTGTCAATCTTGCAAGCCC +
Preference number: 6 (lower is better)
Translates to: THDHKETPFSSP*DPSGSCQSCKP
Trigger: GGGCTTGCAAGATTGACAGGATCCTGAAGGATCCCATGGGCTGGAGAATGGGGTCTCCTTATGATCATGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468221.5
CDS CAA 72 bp GATTTATCCCTGGGGGCATGCTCTGTTTTTCCACTGTaGAACTGGGACAGCTCTGTCCCTAGGTGGCAAGAG +
Preference number: 6 (lower is better)
Translates to: DLSLGACSVFPL*NWDSSVPRWQE
Trigger: CTCTTGCCACCTAGGGACAGAGCTGTCCCAGTTCAACAGTGGAAAAACAGAGCATGCCCCCAGGGATAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000468221.5
ENST00000490536.1
CDS GCA 72 bp CTCTGTAGTCCCTCAACCGATTTATCCCTGGGGGCATaGTCTGTTTTTCCACTGTTGAACTGGGACAGCTCT +
Preference number: 6 (lower is better)
Translates to: LCSPSTDLSLGA*SVFPLLNWDSS
Trigger: AGAGCTGTCCCAGTTCAACAGTGGAAAAACAGAGCATGCCCCCAGGGATAAATCGGTTGAGGGACTACAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000468221.5
ENST00000468721.1
ENST00000490536.1
CDS CAA 72 bp GCTGTGAGGATGAAATGTGGTGATGCAATCCAGCACTaGGGAAAGGGGGTACTCACAGGCCATTGGCAAACT +
Preference number: 6 (lower is better)
Translates to: AVRMKCGDAIQH*GKGVLTGHWQT
Trigger: AGTTTGCCAATGGCCTGTGAGTACCCCCTTTCCCAAGTGCTGGATTGCATCACCACATTTCATCCTCACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490536.1
CDS CCA 72 bp CGGTTCACATCGGCCGATTCACACACACACACAACATaGGGCGTTGTGAAACATTTTCCAAAGGCAGAAGTG +
Preference number: 6 (lower is better)
Translates to: RFTSADSHTHTT*GVVKHFPKAEV
Trigger: CACTTCTGCCTTTGGAAAATGTTTCACAACGCCCCATGTTGTGTGTGTGTGTGAATCGGCCGATGTGAACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468221.5