RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLAMF8 (Homo sapiens)

Ensembl gene IDs: ENSG00000158714

Ensembl transcript IDs: ENST00000289707.10, ENST00000368104.4, ENST00000471286.5, ENST00000497141.1

Found 282 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGGGAAGGGGGAGGTGTGAAACGTGCTGGTGCTTCCTGTCCTCGTaGTGTGATGGCTGCCCAGGCTGCTCCTTCGAGGCAGGACAGGAT +
Preference number: 1 (lower is better)
Translates to: EGRGRCETCWCFLSS*CDGCPGCSFEAGQD
Trigger: ATCCTGTCCTGCCTCGAAGGAGCAGCCTGGGCAGCCATCACACCACGAGGACAGGAAGCACCAGCACGTTTCACACCTCCCCCTTCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
3UTR GCA 90 bp ACGTGCTGGTGCTTCCTGTCCTCGTGGTGTGATGGCTGCCCAGGCTaGTCCTTCGAGGCAGGACAGGATTCCCATGGGAGATATGAGGAC +
Preference number: 1 (lower is better)
Translates to: TCWCFLSSWCDGCPG*SFEAGQDSHGRYED
Trigger: GTCCTCATATCTCCCATGGGAATCCTGTCCTGCCTCGAAGGAGCAGCCTGGGCAGCCATCACACCACGAGGACAGGAAGCACCAGCACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
3UTR GCA 90 bp AGGTGTGAAACGTGCTGGTGCTTCCTGTCCTCGTGGTGTGATGGCTaGCCAGGCTGCTCCTTCGAGGCAGGACAGGATTCCCATGGGAGA +
Preference number: 1 (lower is better)
Translates to: RCETCWCFLSSWCDG*PGCSFEAGQDSHGR
Trigger: TCTCCCATGGGAATCCTGTCCTGCCTCGAAGGAGCAGCCTGGGCAGCCATCACACCACGAGGACAGGAAGCACCAGCACGTTTCACACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
3UTR CCA 90 bp GAACCTCTGAGCAGGCCAGGCAGGGAGGATCTGGGAACAATCGAGTaGAAGAGTGGTGATGTGGATCTGGAGGCCAGCTGTGCTGATCCT +
Preference number: 1 (lower is better)
Translates to: EPLSRPGREDLGTIE*KSGDVDLEASCADP
Trigger: AGGATCAGCACAGCTGGCCTCCAGATCCACATCACCACTCTTCCACTCGATTGTTCCCAGATCCTCCCTGCCTGGCCTGCTCAGAGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR TCA 90 bp TGGGGCAAATTCAGTATTTCTTTTCCTGGCCACTGTGCTGGAGCGTaGGGAAAGACTCTCCACCCTCACTCCCAGATCCTGCAGGAGGCG +
Preference number: 1 (lower is better)
Translates to: WGKFSISFPGHCAGA*GKTLHPHSQILQEA
Trigger: CGCCTCCTGCAGGATCTGGGAGTGAGGGTGGAGAGTCTTTCCTCACGCTCCAGCACAGTGGCCAGGAAAAGAAATACTGAATTTGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR TCA 90 bp GTGATGTGGATCTGGAGGCCAGCTGTGCTGATCCTTTGTCCAAGGTaGAGTGATTGCCCAGGAACTGGGGAGAAGAGGGAAGGTCCTTGG +
Preference number: 1 (lower is better)
Translates to: VMWIWRPAVLILCPR*SDCPGTGEKREGPW
Trigger: CCAAGGACCTTCCCTCTTCTCCCCAGTTCCTGGGCAATCACTTCACCTTGGACAAAGGATCAGCACAGCTGGCCTCCAGATCCACATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR CCA 90 bp GAGAGCTGCAGGTCCCATCTCATCCAGAGCTGCTTTGATCTGAGGTaGGGCCCTGGAGATGAACGAAAGAAAGGTGGGGAGTGCTGTGTA +
Preference number: 1 (lower is better)
Translates to: ESCRSHLIQSCFDLR*GPGDERKKGGECCV
Trigger: TACACAGCACTCCCCACCTTTCTTTCGTTCATCTCCAGGGCCCCACCTCAGATCAAAGCAGCTCTGGATGAGATGGGACCTGCAGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR GCA 90 bp ACTGTCGAAATGAGGTTGCTAAGAGTCACCTTGTGGAGGGAGAGCTaGAGGTCCCATCTCATCCAGAGCTGCTTTGATCTGAGGTGGGGC +
Preference number: 1 (lower is better)
Translates to: TVEMRLLRVTLWRES*RSHLIQSCFDLRWG
Trigger: GCCCCACCTCAGATCAAAGCAGCTCTGGATGAGATGGGACCTGCAGCTCTCCCTCCACAAGGTGACTCTTAGCAACCTCATTTCGACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR CCA 90 bp TGTTGGCTGGGGCAAATTCAGTATTTCTTTTCCTGGCCACTGTGCTaGAGCGTGAGGAAAGACTCTCCACCCTCACTCCCAGATCCTGCA +
Preference number: 1 (lower is better)
Translates to: CWLGQIQYFFSWPLC*SVRKDSPPSLPDPA
Trigger: TGCAGGATCTGGGAGTGAGGGTGGAGAGTCTTTCCTCACGCTCCAGCACAGTGGCCAGGAAAAGAAATACTGAATTTGCCCCAGCCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR CCA 90 bp ATGTCCCCATGGATCTGGATCCTGGAGAACTTCCAGTGTCCTGGATaGAATGTTCTGCTTGGCTCATCTTGCCCAGAGAAGAGCCAGGAT +
Preference number: 1 (lower is better)
Translates to: MSPWIWILENFQCPG*NVLLGSSCPEKSQD
Trigger: ATCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAGAACATTCCATCCAGGACACTGGAAGTTCTCCAGGATCCAGATCCATGGGGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
3UTR GCA 90 bp GGTGATTTCCAGGCACCAGTTATGTCCCAGAGCATCGTGTGCCTGTaGAGTGGGGTTACTGATAGTCCAGGCATCAGTTCATATTGTCCT +
Preference number: 1 (lower is better)
Translates to: GDFQAPVMSQSIVCL*SGVTDSPGISSYCP
Trigger: AGGACAATATGAACTGATGCCTGGACTATCAGTAACCCCACTGCACAGGCACACGATGCTCTGGGACATAACTGGTGCCTGGAAATCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
3UTR GCA 90 bp GACCATGGTGATTTCCAGGCACCAGTTATGTCCCAGAGCATCGTGTaGCTGTGCAGTGGGGTTACTGATAGTCCAGGCATCAGTTCATAT +
Preference number: 1 (lower is better)
Translates to: DHGDFQAPVMSQSIV*LCSGVTDSPGISSY
Trigger: ATATGAACTGATGCCTGGACTATCAGTAACCCCACTGCACAGGCACACGATGCTCTGGGACATAACTGGTGCCTGGAAATCACCATGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
3UTR CCA 90 bp CTGGATCCTGGAGAACTTCCAGTGTCCTGGATGGAATGTTCTGCTTaGCTCATCTTGCCCAGAGAAGAGCCAGGATATGAGAAGATGGGA +
Preference number: 1 (lower is better)
Translates to: LDPGELPVSWMECSA*LILPREEPGYEKMG
Trigger: TCCCATCTTCTCATATCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAGAACATTCCATCCAGGACACTGGAAGTTCTCCAGGATCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
3UTR CCA 90 bp TGGTGGGGGAGGGAATGCCTTGGACTATTAATGTCCCCATGGATCTaGATCCTGGAGAACTTCCAGTGTCCTGGATGGAATGTTCTGCTT +
Preference number: 1 (lower is better)
Translates to: WWGRECLGLLMSPWI*ILENFQCPGWNVLL
Trigger: AAGCAGAACATTCCATCCAGGACACTGGAAGTTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCCAAGGCATTCCCTCCCCCACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
3UTR CCA 90 bp ACGCTACAAACCACTGTCGAAATGAGGTTGCTAAGAGTCACCTTGTaGAGGGAGAGCTGCAGGTCCCATCTCATCCAGAGCTGCTTTGAT +
Preference number: 1 (lower is better)
Translates to: TLQTTVEMRLLRVTL*RESCRSHLIQSCFD
Trigger: ATCAAAGCAGCTCTGGATGAGATGGGACCTGCAGCTCTCCCTCCACAAGGTGACTCTTAGCAACCTCATTTCGACAGTGGTTTGTAGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR TCA 90 bp GGTTCTTCACTCTCTCAGTTTCAGGCAGGAAGACTCATCCTGAGCTaGGCTGCTTTTCTTGAAGTTGTGCAAGAACGTCCTGTTGGCTGG +
Preference number: 1 (lower is better)
Translates to: GSSLSQFQAGRLILS*AAFLEVVQERPVGW
Trigger: CCAGCCAACAGGACGTTCTTGCACAACTTCAAGAAAAGCAGCTCAGCTCAGGATGAGTCTTCCTGCCTGAAACTGAGAGAGTGAAGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR CCA 90 bp ATTAATGTCCCCATGGATCTGGATCCTGGAGAACTTCCAGTGTCCTaGATGGAATGTTCTGCTTGGCTCATCTTGCCCAGAGAAGAGCCA +
Preference number: 1 (lower is better)
Translates to: INVPMDLDPGELPVS*MECSAWLILPREEP
Trigger: TGGCTCTTCTCTGGGCAAGATGAGCCAAGCAGAACATTCCATCCAGGACACTGGAAGTTCTCCAGGATCCAGATCCATGGGGACATTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
3UTR GCA 90 bp CCCACCTCTCACTTTCACCTATTTCTAGACCTTTTCTTACAGCAATaGCTTGGCCCTCAGGAAGCATCAGATCTCAAACTGCAGGGTCTG +
Preference number: 1 (lower is better)
Translates to: PTSHFHLFLDLFLQQ*LGPQEASDLKLQGL
Trigger: CAGACCCTGCAGTTTGAGATCTGATGCTTCCTGAGGGCCAAGGCATTGCTGTAAGAAAAGGTCTAGAAATAGGTGAAAGTGAGAGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR GCA 90 bp GGGAACTTTATTAGAGCAGTGTGGATCTGTTCAACAAGGCCCTGGTaGACCACGCTACAAACCACTGTCGAAATGAGGTTGCTAAGAGTC +
Preference number: 1 (lower is better)
Translates to: GNFIRAVWICSTRPW*TTLQTTVEMRLLRV
Trigger: GACTCTTAGCAACCTCATTTCGACAGTGGTTTGTAGCGTGGTGCACCAGGGCCTTGTTGAACAGATCCACACTGCTCTAATAAAGTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR TCA 90 bp TCAGTTTCAGGCAGGAAGACTCATCCTGAGCTGAGCTGCTTTTCTTaGAGTTGTGCAAGAACGTCCTGTTGGCTGGGGCAAATTCAGTAT +
Preference number: 1 (lower is better)
Translates to: SVSGRKTHPELSCFS*SCARTSCWLGQIQY
Trigger: ATACTGAATTTGCCCCAGCCAACAGGACGTTCTTGCACAACTTCAAGAAAAGCAGCTCAGCTCAGGATGAGTCTTCCTGCCTGAAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR CCA 90 bp GATGGGAACTTTATTAGAGCAGTGTGGATCTGTTCAACAAGGCCCTaGTGCACCACGCTACAAACCACTGTCGAAATGAGGTTGCTAAGA +
Preference number: 1 (lower is better)
Translates to: DGNFIRAVWICSTRP*CTTLQTTVEMRLLR
Trigger: TCTTAGCAACCTCATTTCGACAGTGGTTTGTAGCGTGGTGCACCAGGGCCTTGTTGAACAGATCCACACTGCTCTAATAAAGTTCCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR GCA 90 bp GAGATGGTGAGGATGTCTATTAATATGGTGTTTCCTGCAAAACGGTaGCCATCTCAACCATGGGTTGTCAACCATCCTCGGTGTCTACAA +
Preference number: 1 (lower is better)
Translates to: EMVRMSINMVFPAKR*PSQPWVVNHPRCLQ
Trigger: TTGTAGACACCGAGGATGGTTGACAACCCATGGTTGAGATGGGCACCGTTTTGCAGGAAACACCATATTAATAGACATCCTCACCATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR GCA 90 bp CGCTTGACTACTGATTCCCAAGTGCCAAGAAATGTACCCAGCACATaGAGCGCCCTCAATCAATATTTGTTGTGGTGTGACTTACAAAGC +
Preference number: 1 (lower is better)
Translates to: RLTTDSQVPRNVPST*SALNQYLLWCDLQS
Trigger: GCTTTGTAAGTCACACCACAACAAATATTGATTGAGGGCGCTGCATGTGCTGGGTACATTTCTTGGCACTTGGGAATCAGTAGTCAAGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR TCA 90 bp TTTATGGTTCTTCACTCTCTCAGTTTCAGGCAGGAAGACTCATCCTaGGCTGAGCTGCTTTTCTTGAAGTTGTGCAAGAACGTCCTGTTG +
Preference number: 1 (lower is better)
Translates to: FMVLHSLSFRQEDSS*AELLFLKLCKNVLL
Trigger: CAACAGGACGTTCTTGCACAACTTCAAGAAAAGCAGCTCAGCTCAGGATGAGTCTTCCTGCCTGAAACTGAGAGAGTGAAGAACCATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR TCA 90 bp TGTACCCAGCACATGCAGCGCCCTCAATCAATATTTGTTGTGGTGTaGCTTACAAAGCATCAGTCTCAATGCTCATTAGCACAAAATTGG +
Preference number: 1 (lower is better)
Translates to: CTQHMQRPQSIFVVV*LTKHQSQCSLAQNW
Trigger: CCAATTTTGTGCTAATGAGCATTGAGACTGATGCTTTGTAAGTCACACCACAACAAATATTGATTGAGGGCGCTGCATGTGCTGGGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR CCA 90 bp TCTATTAATATGGTGTTTCCTGCAAAACGGTGCCCATCTCAACCATaGGTTGTCAACCATCCTCGGTGTCTACAACTGCAATTTACCTTT +
Preference number: 1 (lower is better)
Translates to: SINMVFPAKRCPSQP*VVNHPRCLQLQFTF
Trigger: AAAGGTAAATTGCAGTTGTAGACACCGAGGATGGTTGACAACCCATGGTTGAGATGGGCACCGTTTTGCAGGAAACACCATATTAATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR-3UTR GCA 90 bp TGTGATGGCTGCCCAGGCTGCTCCTTCGAGGCAGGACAGGATTCCCATGGGAGATCCCAGAGCATCGTGTaGCTGTGCAGTGGGGTTACT +
Preference number: 2 (lower is better)
Translates to: CDGCPGCSFEAGQDSHGRSQSIV*LCSGVT
Trigger: AGTAACCCCACTGCACAGGCACACGATGCTCTGGGA...TCTCCCATGGGAATCCTGTCCTGCCTCGAAGGAGCAGCCTGGGCAGCCATCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
3UTR CAA 90 bp ACAAGGCCCTGGTGCACCACGCTACAAACCACTGTCGAAATGAGGTaGCTAAGAGTCACCTTGTGGAGGGAGAGCTGCAGGTCCCATCTC +
Preference number: 2 (lower is better)
Translates to: TRPWCTTLQTTVEMR*LRVTLWRESCRSHL
Trigger: GAGATGGGACCTGCAGCTCTCCCTCCACAAGGTGACTCTTAGCAACCTCATTTCGACAGTGGTTTGTAGCGTGGTGCACCAGGGCCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR-3UTR CCA 90 bp GTCCTGGATGGAATGTTCTGCTTGGCTCATCTTGCCCAGAGAAGAGCCAGGATATGCTTCCTGTCCTCGTaGTGTGATGGCTGCCCAGGC +
Preference number: 2 (lower is better)
Translates to: VLDGMFCLAHLAQRRARICFLSS*CDGCPG
Trigger: GCCTGGGCAGCCATCACACCACGAGGACAGGAAGCA...TATCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAGAACATTCCATCCAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
3UTR-3UTR GCA 90 bp TGGAGTCAGAGTGACCTCTACAGTCCTGCTGTTGGGCTGTGGGGTCTTTGTCCCCTGGATGGAATGTTCTaGTTGGCTCATCTTGCCCAG +
Preference number: 2 (lower is better)
Translates to: WSQSDLYSPAVGLWGLCPLDGMF*LAHLAQ
Trigger: CTGGGCAAGATGAGCCAAGCAGAACATTCCATCCAG...GGGACAAAGACCCCACAGCCCAACAGCAGGACTGTAGAGGTCACTCTGACTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR-3UTR GCA 90 bp TGGAGTCAGAGTGACCTCTACAGTCCTGCTGTTGGGCTGTGGGGTCTTTGTCCCTGGTGGGGGAGGGAATaGCTTGGACTATTAATGTCC +
Preference number: 2 (lower is better)
Translates to: WSQSDLYSPAVGLWGLCPWWGRE*LGLLMS
Trigger: GGACATTAATAGTCCAAGGCATTCCCTCCCCCACCA...GGGACAAAGACCCCACAGCCCAACAGCAGGACTGTAGAGGTCACTCTGACTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR-3UTR GCA 90 bp TGCCTTGGACTATTAATGTCCCCATGGATCTGGATCCTGGAGAACTTCCAGTGTTCGTGGTGTGATGGCTaGCCAGGCTGCTCCTTCGAG +
Preference number: 2 (lower is better)
Translates to: CLGLLMSPWIWILENFQCSWCDG*PGCSFE
Trigger: CTCGAAGGAGCAGCCTGGGCAGCCATCACACCACGA...ACACTGGAAGTTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCCAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
3UTR-3UTR CCA 90 bp CAGGGAACCTCTGAGCAGGCCAGGCAGGGAGGATCTGGGAACAATCGAGTGGAACTGGAGGCAATTCCTTaGTGCCAGTTGGTTAATACT +
Preference number: 2 (lower is better)
Translates to: QGTSEQARQGGSGNNRVELEAIP*CQLVNT
Trigger: AGTATTAACCAACTGGCACCAAGGAATTGCCTCCAG...TTCCACTCGATTGTTCCCAGATCCTCCCTGCCTGGCCTGCTCAGAGGTTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR-3UTR CCA 90 bp TTCAACAAGGCCCTGGTGCACCACGCTACAAACCACTGTCGAAATGAGGTTGCTGTGGTGATGTGGATCTaGAGGCCAGCTGTGCTGATC +
Preference number: 2 (lower is better)
Translates to: FNKALVHHATNHCRNEVAVVMWI*RPAVLI
Trigger: GATCAGCACAGCTGGCCTCCAGATCCACATCACCAC...AGCAACCTCATTTCGACAGTGGTTTGTAGCGTGGTGCACCAGGGCCTTGTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR CAA 90 bp GGAGAACTTCCAGTGTCCTGGATGGAATGTTCTGCTTGGCTCATCTaGCCCAGAGAAGAGCCAGGATATGAGAAGATGGGAGAGGGAAGG +
Preference number: 2 (lower is better)
Translates to: GELPVSWMECSAWLI*PREEPGYEKMGEGR
Trigger: CCTTCCCTCTCCCATCTTCTCATATCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAGAACATTCCATCCAGGACACTGGAAGTTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
3UTR CAA 90 bp ACCACGCTACAAACCACTGTCGAAATGAGGTTGCTAAGAGTCACCTaGTGGAGGGAGAGCTGCAGGTCCCATCTCATCCAGAGCTGCTTT +
Preference number: 2 (lower is better)
Translates to: TTLQTTVEMRLLRVT*WRESCRSHLIQSCF
Trigger: AAAGCAGCTCTGGATGAGATGGGACCTGCAGCTCTCCCTCCACAAGGTGACTCTTAGCAACCTCATTTCGACAGTGGTTTGTAGCGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR-3UTR TCA 90 bp TTCAACAAGGCCCTGGTGCACCACGCTACAAACCACTGTCGAAATGAGGTTGCTTTGTCCAAGGTGAAGTaGTTGCCCAGGAACTGGGGA +
Preference number: 2 (lower is better)
Translates to: FNKALVHHATNHCRNEVALSKVK*LPRNWG
Trigger: TCCCCAGTTCCTGGGCAATCACTTCACCTTGGACAA...AGCAACCTCATTTCGACAGTGGTTTGTAGCGTGGTGCACCAGGGCCTTGTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR-3UTR GCA 90 bp CTTCTGCATAGCGTTTTATGGTTCTTCACTCTCTCAGTTTCAGGCAGGAAGACTGATGGCTGCCCAGGCTaGTCCTTCGAGGCAGGACAG +
Preference number: 2 (lower is better)
Translates to: LLHSVLWFFTLSVSGRKTDGCPG*SFEAGQ
Trigger: CTGTCCTGCCTCGAAGGAGCAGCCTGGGCAGCCATC...AGTCTTCCTGCCTGAAACTGAGAGAGTGAAGAACCATAAAACGCTATGCAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR-3UTR GCA 90 bp AATGTTCTGCTTGGCTCATCTTGCCCAGAGAAGAGCCAGGATATGAGAAGATGGTCCCAGAGCATCGTGTaGCTGTGCAGTGGGGTTACT +
Preference number: 2 (lower is better)
Translates to: NVLLGSSCPEKSQDMRRWSQSIV*LCSGVT
Trigger: AGTAACCCCACTGCACAGGCACACGATGCTCTGGGA...CCATCTTCTCATATCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAGAACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
3UTR-3UTR GCA 90 bp GGGGAGGGAATGCCTTGGACTATTAATGTCCCCATGGATCTGGATCCTGGAGAACTGGATGGAATGTTCTaGTTGGCTCATCTTGCCCAG +
Preference number: 2 (lower is better)
Translates to: GEGMPWTINVPMDLDPGELDGMF*LAHLAQ
Trigger: CTGGGCAAGATGAGCCAAGCAGAACATTCCATCCAG...TTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCCAAGGCATTCCCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
3UTR-3UTR CCA 90 bp TGTTGGCTGGGGCAAATTCAGTATTTCTTTTCCTGGCCACTGTGCTGGAGCGTGGGGGAGGGAATGCCTTaGACTATTAATGTCCCCATG +
Preference number: 2 (lower is better)
Translates to: CWLGQIQYFFSWPLCWSVGEGMP*TINVPM
Trigger: CATGGGGACATTAATAGTCCAAGGCATTCCCTCCCC...CACGCTCCAGCACAGTGGCCAGGAAAAGAAATACTGAATTTGCCCCAGCCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR-3UTR GCA 90 bp AATGTTCTGCTTGGCTCATCTTGCCCAGAGAAGAGCCAGGATATGAGAAGATGGTGTGAAACGTGCTGGTaGTTCCTGTCCTCGTGGTGT +
Preference number: 2 (lower is better)
Translates to: NVLLGSSCPEKSQDMRRWCETCW*FLSSWC
Trigger: ACACCACGAGGACAGGAAGCACCAGCACGTTTCACA...CCATCTTCTCATATCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAGAACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
3UTR-3UTR GCA 90 bp TTCAACAAGGCCCTGGTGCACCACGCTACAAACCACTGTCGAAATGAGGTTGCTCTTTTCTTACAGCAATaGCTTGGCCCTCAGGAAGCA +
Preference number: 2 (lower is better)
Translates to: FNKALVHHATNHCRNEVALFLQQ*LGPQEA
Trigger: TGCTTCCTGAGGGCCAAGGCATTGCTGTAAGAAAAG...AGCAACCTCATTTCGACAGTGGTTTGTAGCGTGGTGCACCAGGGCCTTGTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR-3UTR TCA 90 bp GTACCCAGCACATGCAGCGCCCTCAATCAATATTTGTTGTGGTGTGACTTACAACCTAGGTGGGGAGATTaGAGCCACCCTGGGAAAATA +
Preference number: 2 (lower is better)
Translates to: VPSTCSALNQYLLWCDLQPRWGD*SHPGKI
Trigger: TATTTTCCCAGGGTGGCTTCAATCTCCCCACCTAGG...TTGTAAGTCACACCACAACAAATATTGATTGAGGGCGCTGCATGTGCTGGGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR-3UTR GCA 90 bp AATGTTCTGCTTGGCTCATCTTGCCCAGAGAAGAGCCAGGATATGAGAAGATGGAGCATCGTGTGCCTGTaGAGTGGGGTTACTGATAGT +
Preference number: 2 (lower is better)
Translates to: NVLLGSSCPEKSQDMRRWSIVCL*SGVTDS
Trigger: ACTATCAGTAACCCCACTGCACAGGCACACGATGCT...CCATCTTCTCATATCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAGAACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
3UTR-3UTR GCA 90 bp GAATGTTCTGCTTGGCTCATCTTGCCCAGAGAAGAGCCAGGATATGAGAAGATGAGCATCGTGTGCCTGTaGAGTGGGGTTACTGATAGT +
Preference number: 2 (lower is better)
Translates to: ECSAWLILPREEPGYEKMSIVCL*SGVTDS
Trigger: ACTATCAGTAACCCCACTGCACAGGCACACGATGCT...CATCTTCTCATATCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAGAACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
3UTR-3UTR CCA 90 bp TTCAACAAGGCCCTGGTGCACCACGCTACAAACCACTGTCGAAATGAGGTTGCTCTATTAATGTCCCCATaGATCTGGATCCTGGAGAAC +
Preference number: 2 (lower is better)
Translates to: FNKALVHHATNHCRNEVALLMSP*IWILEN
Trigger: GTTCTCCAGGATCCAGATCCATGGGGACATTAATAG...AGCAACCTCATTTCGACAGTGGTTTGTAGCGTGGTGCACCAGGGCCTTGTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR-3UTR CCA 90 bp CTTCTGCATAGCGTTTTATGGTTCTTCACTCTCTCAGTTTCAGGCAGGAAGACTCATGGATCTGGATCCTaGAGAACTTCCAGTGTCCTG +
Preference number: 2 (lower is better)
Translates to: LLHSVLWFFTLSVSGRKTHGSGS*RTSSVL
Trigger: CAGGACACTGGAAGTTCTCCAGGATCCAGATCCATG...AGTCTTCCTGCCTGAAACTGAGAGAGTGAAGAACCATAAAACGCTATGCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR CAA 90 bp TTAATATGGTGTTTCCTGCAAAACGGTGCCCATCTCAACCATGGGTaGTCAACCATCCTCGGTGTCTACAACTGCAATTTACCTTTGAGG +
Preference number: 2 (lower is better)
Translates to: LIWCFLQNGAHLNHG*STILGVYNCNLPLR
Trigger: CCTCAAAGGTAAATTGCAGTTGTAGACACCGAGGATGGTTGACAACCCATGGTTGAGATGGGCACCGTTTTGCAGGAAACACCATATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR-3UTR TCA 90 bp CTTCTGCATAGCGTTTTATGGTTCTTCACTCTCTCAGTTTCAGGCAGGAAGACTTTGGTTAATACTTTATaGATAGTGGTGGGGGAGGGA +
Preference number: 2 (lower is better)
Translates to: LLHSVLWFFTLSVSGRKTLVNTL*IVVGEG
Trigger: TCCCTCCCCCACCACTATTCATAAAGTATTAACCAA...AGTCTTCCTGCCTGAAACTGAGAGAGTGAAGAACCATAAAACGCTATGCAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR-3UTR CCA 90 bp TTGTTTATTTATATTATCCAGACCATAAACTCTCAAAGGCAAGGGTTTCGCTTGTGCTTTGATCTGAGGTaGGGCCCTGGAGATGAACGA +
Preference number: 2 (lower is better)
Translates to: LFIYIIQTINSQRQGFRLCFDLR*GPGDER
Trigger: TCGTTCATCTCCAGGGCCCCACCTCAGATCAAAGCA...CAAGCGAAACCCTTGCCTTTGAGAGTTTATGGTCTGGATAATATAAATAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR GCA 72 bp ACGTGCTGGTGCTTCCTGTCCTCGTGGTGTGATGGCTaGCCAGGCTGCTCCTTCGAGGCAGGACAGGATTCC +
Preference number: 3 (lower is better)
Translates to: TCWCFLSSWCDG*PGCSFEAGQDS
Trigger: GGAATCCTGTCCTGCCTCGAAGGAGCAGCCTGGGCAGCCATCACACCACGAGGACAGGAAGCACCAGCACGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
3UTR CCA 72 bp GGGAGGTGTGAAACGTGCTGGTGCTTCCTGTCCTCGTaGTGTGATGGCTGCCCAGGCTGCTCCTTCGAGGCA +
Preference number: 3 (lower is better)
Translates to: GRCETCWCFLSS*CDGCPGCSFEA
Trigger: TGCCTCGAAGGAGCAGCCTGGGCAGCCATCACACCACGAGGACAGGAAGCACCAGCACGTTTCACACCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
3UTR GCA 72 bp TGCTTCCTGTCCTCGTGGTGTGATGGCTGCCCAGGCTaGTCCTTCGAGGCAGGACAGGATTCCCATGGGAGA +
Preference number: 3 (lower is better)
Translates to: CFLSSWCDGCPG*SFEAGQDSHGR
Trigger: TCTCCCATGGGAATCCTGTCCTGCCTCGAAGGAGCAGCCTGGGCAGCCATCACACCACGAGGACAGGAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
3UTR CCA 72 bp AAGATGGGAGAGGGAAGGGGGAGGTGTGAAACGTGCTaGTGCTTCCTGTCCTCGTGGTGTGATGGCTGCCCA +
Preference number: 3 (lower is better)
Translates to: KMGEGRGRCETC*CFLSSWCDGCP
Trigger: TGGGCAGCCATCACACCACGAGGACAGGAAGCACCAGCACGTTTCACACCTCCCCCTTCCCTCTCCCATCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
3UTR GCA 72 bp TGGAGGGAGAGCTGCAGGTCCCATCTCATCCAGAGCTaGTTTGATCTGAGGTGGGGCCCTGGAGATGAACGA +
Preference number: 3 (lower is better)
Translates to: WRESCRSHLIQS*FDLRWGPGDER
Trigger: TCGTTCATCTCCAGGGCCCCACCTCAGATCAAAGCAGCTCTGGATGAGATGGGACCTGCAGCTCTCCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR CCA 72 bp AGCAGGCCAGGCAGGGAGGATCTGGGAACAATCGAGTaGAAGAGTGGTGATGTGGATCTGGAGGCCAGCTGT +
Preference number: 3 (lower is better)
Translates to: SRPGREDLGTIE*KSGDVDLEASC
Trigger: ACAGCTGGCCTCCAGATCCACATCACCACTCTTCCACTCGATTGTTCCCAGATCCTCCCTGCCTGGCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR GCA 72 bp GATTTCCAGGCACCAGTTATGTCCCAGAGCATCGTGTaGCTGTGCAGTGGGGTTACTGATAGTCCAGGCATC +
Preference number: 3 (lower is better)
Translates to: DFQAPVMSQSIV*LCSGVTDSPGI
Trigger: GATGCCTGGACTATCAGTAACCCCACTGCACAGGCACACGATGCTCTGGGACATAACTGGTGCCTGGAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
3UTR CCA 72 bp ACCACTGTCGAAATGAGGTTGCTAAGAGTCACCTTGTaGAGGGAGAGCTGCAGGTCCCATCTCATCCAGAGC +
Preference number: 3 (lower is better)
Translates to: TTVEMRLLRVTL*RESCRSHLIQS
Trigger: GCTCTGGATGAGATGGGACCTGCAGCTCTCCCTCCACAAGGTGACTCTTAGCAACCTCATTTCGACAGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR-3UTR CAA 90 bp TGTTGGCTGGGGCAAATTCAGTATTTCTTTTCCTGGCCACTGTGCTGGAGCGTGTCTGCTTGGCTCATCTaGCCCAGAGAAGAGCCAGGA +
Preference number: 3 (lower is better)
Translates to: CWLGQIQYFFSWPLCWSVSAWLI*PREEPG
Trigger: TCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAGA...CACGCTCCAGCACAGTGGCCAGGAAAAGAAATACTGAATTTGCCCCAGCCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR TCA 72 bp GGCAGGAAGACTCATCCTGAGCTGAGCTGCTTTTCTTaGAGTTGTGCAAGAACGTCCTGTTGGCTGGGGCAA +
Preference number: 3 (lower is better)
Translates to: GRKTHPELSCFS*SCARTSCWLGQ
Trigger: TTGCCCCAGCCAACAGGACGTTCTTGCACAACTTCAAGAAAAGCAGCTCAGCTCAGGATGAGTCTTCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR GCA 72 bp CTGGGGCAAATTCAGTATTTCTTTTCCTGGCCACTGTaGTGGAGCGTGAGGAAAGACTCTCCACCCTCACTC +
Preference number: 3 (lower is better)
Translates to: LGQIQYFFSWPL*WSVRKDSPPSL
Trigger: GAGTGAGGGTGGAGAGTCTTTCCTCACGCTCCAGCACAGTGGCCAGGAAAAGAAATACTGAATTTGCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR CCA 72 bp CCCATGGATCTGGATCCTGGAGAACTTCCAGTGTCCTaGATGGAATGTTCTGCTTGGCTCATCTTGCCCAGA +
Preference number: 3 (lower is better)
Translates to: PMDLDPGELPVS*MECSAWLILPR
Trigger: TCTGGGCAAGATGAGCCAAGCAGAACATTCCATCCAGGACACTGGAAGTTCTCCAGGATCCAGATCCATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
3UTR CCA 72 bp TGGGGGAGGGAATGCCTTGGACTATTAATGTCCCCATaGATCTGGATCCTGGAGAACTTCCAGTGTCCTGGA +
Preference number: 3 (lower is better)
Translates to: WGRECLGLLMSP*IWILENFQCPG
Trigger: TCCAGGACACTGGAAGTTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCCAAGGCATTCCCTCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
3UTR-3UTR CAA 90 bp TGGTTCTTCACTCTCTCAGTTTCAGGCAGGAAGACTCATCCTGAGCTGAGCTGCCATCTCAACCATGGGTaGTCAACCATCCTCGGTGTC +
Preference number: 3 (lower is better)
Translates to: WFFTLSVSGRKTHPELSCHLNHG*STILGV
Trigger: GACACCGAGGATGGTTGACAACCCATGGTTGAGATG...GCAGCTCAGCTCAGGATGAGTCTTCCTGCCTGAAACTGAGAGAGTGAAGAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR-3UTR CAA 90 bp TGCCTTGGACTATTAATGTCCCCATGGATCTGGATCCTGGAGAACTTCCAGTGTTCTGCTTGGCTCATCTaGCCCAGAGAAGAGCCAGGA +
Preference number: 3 (lower is better)
Translates to: CLGLLMSPWIWILENFQCSAWLI*PREEPG
Trigger: TCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAGA...ACACTGGAAGTTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCCAAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
3UTR CCA 72 bp TGGATCTGGATCCTGGAGAACTTCCAGTGTCCTGGATaGAATGTTCTGCTTGGCTCATCTTGCCCAGAGAAG +
Preference number: 3 (lower is better)
Translates to: WIWILENFQCPG*NVLLGSSCPEK
Trigger: CTTCTCTGGGCAAGATGAGCCAAGCAGAACATTCCATCCAGGACACTGGAAGTTCTCCAGGATCCAGATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
3UTR GCA 72 bp ATTAGAGCAGTGTGGATCTGTTCAACAAGGCCCTGGTaGACCACGCTACAAACCACTGTCGAAATGAGGTTG +
Preference number: 3 (lower is better)
Translates to: IRAVWICSTRPW*TTLQTTVEMRL
Trigger: CAACCTCATTTCGACAGTGGTTTGTAGCGTGGTGCACCAGGGCCTTGTTGAACAGATCCACACTGCTCTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR TCA 72 bp AGATCCTGCAGGAGGCGTGAGAGCGGATGGAGATGGTaGGGATGTCTATTAATATGGTGTTTCCTGCAAAAC +
Preference number: 3 (lower is better)
Translates to: RSCRRRESGWRW*GCLLIWCFLQN
Trigger: GTTTTGCAGGAAACACCATATTAATAGACATCCTCACCATCTCCATCCGCTCTCACGCCTCCTGCAGGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR TCA 72 bp CTCTCTCAGTTTCAGGCAGGAAGACTCATCCTGAGCTaGGCTGCTTTTCTTGAAGTTGTGCAAGAACGTCCT +
Preference number: 3 (lower is better)
Translates to: LSQFQAGRLILS*AAFLEVVQERP
Trigger: AGGACGTTCTTGCACAACTTCAAGAAAAGCAGCTCAGCTCAGGATGAGTCTTCCTGCCTGAAACTGAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR TCA 72 bp AAGATGGCCACAATAAAAAGTTTGATGGAGTCAGAGTaGCCTCTACAGTCCTGCTGTTGGGCTGTGGGGTCT +
Preference number: 3 (lower is better)
Translates to: KMATIKSLMESE*PLQSCCWAVGS
Trigger: AGACCCCACAGCCCAACAGCAGGACTGTAGAGGTCACTCTGACTCCATCAAACTTTTTATTGTGGCCATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR CCA 72 bp AGGGAATGCCTTGGACTATTAATGTCCCCATGGATCTaGATCCTGGAGAACTTCCAGTGTCCTGGATGGAAT +
Preference number: 3 (lower is better)
Translates to: RECLGLLMSPWI*ILENFQCPGWN
Trigger: ATTCCATCCAGGACACTGGAAGTTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCCAAGGCATTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
3UTR CCA 72 bp TTTATTAGAGCAGTGTGGATCTGTTCAACAAGGCCCTaGTGCACCACGCTACAAACCACTGTCGAAATGAGG +
Preference number: 3 (lower is better)
Translates to: FIRAVWICSTRP*CTTLQTTVEMR
Trigger: CCTCATTTCGACAGTGGTTTGTAGCGTGGTGCACCAGGGCCTTGTTGAACAGATCCACACTGCTCTAATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR-3UTR CAA 90 bp CTTCTGCATAGCGTTTTATGGTTCTTCACTCTCTCAGTTTCAGGCAGGAAGACTTCTTACAGCAATGCCTaGGCCCTCAGGAAGCATCAG +
Preference number: 3 (lower is better)
Translates to: LLHSVLWFFTLSVSGRKTSYSNA*ALRKHQ
Trigger: CTGATGCTTCCTGAGGGCCAAGGCATTGCTGTAAGA...AGTCTTCCTGCCTGAAACTGAGAGAGTGAAGAACCATAAAACGCTATGCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR GCA 72 bp ACTGATTCCCAAGTGCCAAGAAATGTACCCAGCACATaGAGCGCCCTCAATCAATATTTGTTGTGGTGTGAC +
Preference number: 3 (lower is better)
Translates to: TDSQVPRNVPST*SALNQYLLWCD
Trigger: GTCACACCACAACAAATATTGATTGAGGGCGCTGCATGTGCTGGGTACATTTCTTGGCACTTGGGAATCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR CCA 72 bp GCTTTTCTTGAAGTTGTGCAAGAACGTCCTGTTGGCTaGGGCAAATTCAGTATTTCTTTTCCTGGCCACTGT +
Preference number: 3 (lower is better)
Translates to: AFLEVVQERPVG*GKFSISFPGHC
Trigger: ACAGTGGCCAGGAAAAGAAATACTGAATTTGCCCCAGCCAACAGGACGTTCTTGCACAACTTCAAGAAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR TCA 72 bp CACATGCAGCGCCCTCAATCAATATTTGTTGTGGTGTaGCTTACAAAGCATCAGTCTCAATGCTCATTAGCA +
Preference number: 3 (lower is better)
Translates to: HMQRPQSIFVVV*LTKHQSQCSLA
Trigger: TGCTAATGAGCATTGAGACTGATGCTTTGTAAGTCACACCACAACAAATATTGATTGAGGGCGCTGCATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR TCA 72 bp TTTGGTGGAGGGTTAATTAGTCCACTAGTTGACAAGTaGGTCATTAAGGATGGGAACTTTATTAGAGCAGTG +
Preference number: 3 (lower is better)
Translates to: FGGGLISPLVDK*VIKDGNFIRAV
Trigger: CACTGCTCTAATAAAGTTCCCATCCTTAATGACTCACTTGTCAACTAGTGGACTAATTAACCCTCCACCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR-3UTR CAA 90 bp TTGTTTATTTATATTATCCAGACCATAAACTCTCAAAGGCAAGGGTTTCGCTTGCTCATTAGCACAAAATaGGTCTCACAGAAGCACTTT +
Preference number: 3 (lower is better)
Translates to: LFIYIIQTINSQRQGFRLLISTK*VSQKHF
Trigger: AAAGTGCTTCTGTGAGACCAATTTTGTGCTAATGAG...CAAGCGAAACCCTTGCCTTTGAGAGTTTATGGTCTGGATAATATAAATAAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR TCA 90 bp CAGCAATGCCTTGGCCCTCAGGAAGCATCAGATCTCAAACTGCAGGGTCTGGGGGCCCGAGCTCCAGGCTaGGGTTGCTGTGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: QQCLGPQEASDLKLQGLGARAPG*GCCVAG
Trigger: CCCAGCTACACAGCAACCTCAGCCTGGAGCTCGGGC...CCCCAGACCCTGCAGTTTGAGATCTGATGCTTCCTGAGGGCCAAGGCATTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR TCA 90 bp GTGAAACGTGCTGGTGCTTCCTGTCCTCGTGGTGTGATGGCTGCCCAGGCTGCTGGGAAGGGGGAGGTGTaGAACGTGCTGGTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: VKRAGASCPRGVMAAQAAGKGEV*NVLVLP
Trigger: AGGAAGCACCAGCACGTTTCACACCTCCCCCTTCCC...AGCAGCCTGGGCAGCCATCACACCACGAGGACAGGAAGCACCAGCACGTTTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR GCA 90 bp GGCTGCTCCTTCGAGGCAGGACAGGATTCCCATGGGAGATATGAGGACCATGGTCCCAGGCCGAGTGGATaGACGGGAGGAGCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: GCSFEAGQDSHGRYEDHGPRPSG*TGGAVV
Trigger: GACCACAGCTCCTCCCGTGCATCCACTCGGCCTGGG...ACCATGGTCCTCATATCTCCCATGGGAATCCTGTCCTGCCTCGAAGGAGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368104.4
CDS-3UTR CCA 90 bp TGGTGTGATGGCTGCCCAGGCTGCTCCTTCGAGGCAGGACAGGATTCCCATGGGCTTGTACCACGGGCCTaGGCACTGCATCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: WCDGCPGCSFEAGQDSHGLVPRA*ALHLPR
Trigger: TCTGGGAAGATGCAGTGCCCAGGCCCGTGGTACAAG...CCCATGGGAATCCTGTCCTGCCTCGAAGGAGCAGCCTGGGCAGCCATCACACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368104.4
CDS-3UTR TCA 90 bp GTGAAACGTGCTGGTGCTTCCTGTCCTCGTGGTGTGATGGCTGCCCAGGCTGCTGCACCTGTCCGTCTGTaGAGAGGCTGTGTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: VKRAGASCPRGVMAAQAAAPVRL*RGCVVP
Trigger: TGGAACCACACAGCCTCTTCACAGACGGACAGGTGC...AGCAGCCTGGGCAGCCATCACACCACGAGGACAGGAAGCACCAGCACGTTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR TCA 90 bp TGGTGTGATGGCTGCCCAGGCTGCTCCTTCGAGGCAGGACAGGATTCCCATGGGTTGTCCAAGGTGAAGTaGTTGCCCAGGAACTGGGGA +
Preference number: 4 (lower is better)
Translates to: WCDGCPGCSFEAGQDSHGLSKVK*LPRNWG
Trigger: TCCCCAGTTCCTGGGCAATCACTTCACCTTGGACAA...CCCATGGGAATCCTGTCCTGCCTCGAAGGAGCAGCCTGGGCAGCCATCACACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR GCA 90 bp TGGTGTGATGGCTGCCCAGGCTGCTCCTTCGAGGCAGGACAGGATTCCCATGGGTCAACACGGAGAAGTTaGCGCTGTCTCCAGACTCCA +
Preference number: 4 (lower is better)
Translates to: WCDGCPGCSFEAGQDSHGSTRRS*RCLQTP
Trigger: TGGAGTCTGGAGACAGCGGCAACTTCTCCGTGTTGA...CCCATGGGAATCCTGTCCTGCCTCGAAGGAGCAGCCTGGGCAGCCATCACACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR GCA 90 bp GGCTGCTCCTTCGAGGCAGGACAGGATTCCCATGGGAGATATGAGGACCATGGTCTCACTCCCAGATCCTaGAGGAGGCGTGAGAGCGGA +
Preference number: 4 (lower is better)
Translates to: GCSFEAGQDSHGRYEDHGLTPRS*RRRESG
Trigger: TCCGCTCTCACGCCTCCTGCAGGATCTGGGAGTGAG...ACCATGGTCCTCATATCTCCCATGGGAATCCTGTCCTGCCTCGAAGGAGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR GCA 90 bp CAGTTATGTCCCAGAGCATCGTGTGCCTGTGCAGTGGGGTTACTGATAGTCCAGGATGGCTGCCCAGGCTaGTCCTTCGAGGCAGGACAG +
Preference number: 4 (lower is better)
Translates to: QLCPRASCACAVGLLIVQDGCPG*SFEAGQ
Trigger: CTGTCCTGCCTCGAAGGAGCAGCCTGGGCAGCCATC...CTGGACTATCAGTAACCCCACTGCACAGGCACACGATGCTCTGGGACATAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR TCA 90 bp CAGTTATGTCCCAGAGCATCGTGTGCCTGTGCAGTGGGGTTACTGATAGTCCAGCTGCATCGTACACCTTaGGCTGGAGGGTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: QLCPRASCACAVGLLIVQLHRTP*AGGSGS
Trigger: GGACCCAGACCCTCCAGCTCAAGGTGTACGATGCAG...CTGGACTATCAGTAACCCCACTGCACAGGCACACGATGCTCTGGGACATAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR TCA 90 bp CAGGACAGGATTCCCATGGGAGATATGAGGACCATGGTGATTTCCAGGCACCAGGGGAAGGGGGAGGTGTaGAACGTGCTGGTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: QDRIPMGDMRTMVISRHQGKGEV*NVLVLP
Trigger: AGGAAGCACCAGCACGTTTCACACCTCCCCCTTCCC...CTGGTGCCTGGAAATCACCATGGTCCTCATATCTCCCATGGGAATCCTGTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR TCA 90 bp GTGAAACGTGCTGGTGCTTCCTGTCCTCGTGGTGTGATGGCTGCCCAGGCTGCTCAGGAAGACTCATCCTaGGCTGAGCTGCTTTTCTTG +
Preference number: 4 (lower is better)
Translates to: VKRAGASCPRGVMAAQAAQEDSS*AELLFL
Trigger: CAAGAAAAGCAGCTCAGCTCAGGATGAGTCTTCCTG...AGCAGCCTGGGCAGCCATCACACCACGAGGACAGGAAGCACCAGCACGTTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR GCA 90 bp TGGTTCTTCACTCTCTCAGTTTCAGGCAGGAAGACTCATCCTGAGCTGAGCTGCCCGAGCCCCCGACTTTaGTCAGCACTTGGGCACCAG +
Preference number: 4 (lower is better)
Translates to: WFFTLSVSGRKTHPELSCPSPRL*SALGHQ
Trigger: CTGGTGCCCAAGTGCTGAGCAAAGTCGGGGGCTCGG...GCAGCTCAGCTCAGGATGAGTCTTCCTGCCTGAAACTGAGAGAGTGAAGAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR GCA 90 bp CTTCTGCATAGCGTTTTATGGTTCTTCACTCTCTCAGTTTCAGGCAGGAAGACTGCCAGGGGGACGCGCTaGCACCAGCAGCACCGAGCC +
Preference number: 4 (lower is better)
Translates to: LLHSVLWFFTLSVSGRKTARGTR*HQQHRA
Trigger: GGCTCGGTGCTGCTGGTGGCAGCGCGTCCCCCTGGC...AGTCTTCCTGCCTGAAACTGAGAGAGTGAAGAACCATAAAACGCTATGCAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR GCA 90 bp AGGGAAGGGGGAGGTGTGAAACGTGCTGGTGCTTCCTGTCCTCGTGGTGTGATGTCAACAAGGCCCTGGTaGACCACGCTACAAACCACT +
Preference number: 4 (lower is better)
Translates to: REGGGVKRAGASCPRGVMSTRPW*TTLQTT
Trigger: AGTGGTTTGTAGCGTGGTGCACCAGGGCCTTGTTGA...CATCACACCACGAGGACAGGAAGCACCAGCACGTTTCACACCTCCCCCTTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CCA 90 bp CTGCTTGGCTCATCTTGCCCAGAGAAGAGCCAGGATATGAGAAGATGGGAGAGGTGCTTCCTGTCCTCGTaGTGTGATGGCTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LLGSSCPEKSQDMRRWERCFLSS*CDGCPG
Trigger: GCCTGGGCAGCCATCACACCACGAGGACAGGAAGCA...CCTCTCCCATCTTCTCATATCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR CCA 90 bp GTCCTGGATGGAATGTTCTGCTTGGCTCATCTTGCCCAGAGAAGAGCCAGGATAACCTCCCAGGCCGAGTaGATGCACGGGAGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: VLDGMFCLAHLAQRRARITSQAE*MHGRSC
Trigger: ACAGCTCCTCCCGTGCATCCACTCGGCCTGGGAGGT...TATCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAGAACATTCCATCCAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368104.4
3UTR CAA 72 bp TGTAGGTGGCAGGTGGGGATGGTGCAAGCTGACAGGTaGAGTGGCCATGGACCCTGTTCAGGTAATCTTGGG +
Preference number: 4 (lower is better)
Translates to: CRWQVGMVQADR*SGHGPCSGNLG
Trigger: CCCAAGATTACCTGAACAGGGTCCATGGCCACTCAACCTGTCAGCTTGCACCATCCCCACCTGCCACCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR TCA 90 bp CAGGACAGGATTCCCATGGGAGATATGAGGACCATGGTGATTTCCAGGCACCAGCGAGTGGAAGAGTGGTaGTGTGGATCTGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: QDRIPMGDMRTMVISRHQRVEEW*CGSGGQ
Trigger: CTGGCCTCCAGATCCACATCACCACTCTTCCACTCG...CTGGTGCCTGGAAATCACCATGGTCCTCATATCTCCCATGGGAATCCTGTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR GCA 90 bp GGGAGATATGAGGACCATGGTGATTTCCAGGCACCAGTTATGTCCCAGAGCATCTCGTGGTGTGATGGCTaGCCAGGCTGCTCCTTCGAG +
Preference number: 4 (lower is better)
Translates to: GRYEDHGDFQAPVMSQSISWCDG*PGCSFE
Trigger: CTCGAAGGAGCAGCCTGGGCAGCCATCACACCACGA...GATGCTCTGGGACATAACTGGTGCCTGGAAATCACCATGGTCCTCATATCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR GCA 90 bp CAGTTATGTCCCAGAGCATCGTGTGCCTGTGCAGTGGGGTTACTGATAGTCCAGGGGAGGTGTGAAACGTaGTGGTGCTTCCTGTCCTCG +
Preference number: 4 (lower is better)
Translates to: QLCPRASCACAVGLLIVQGRCET*WCFLSS
Trigger: CGAGGACAGGAAGCACCAGCACGTTTCACACCTCCC...CTGGACTATCAGTAACCCCACTGCACAGGCACACGATGCTCTGGGACATAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR CCA 90 bp CTGCTTGGCTCATCTTGCCCAGAGAAGAGCCAGGATATGAGAAGATGGGAGAGGCCCAGGAAGCGGGAATaGTACAGAGTCTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LLGSSCPEKSQDMRRWERPRKRE*YRVSRE
Trigger: CTCCCTGGAGACTCTGTACCATTCCCGCTTCCTGGG...CCTCTCCCATCTTCTCATATCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CCA 90 bp GATATGAGGACCATGGTGATTTCCAGGCACCAGTTATGTCCCAGAGCATCGTGTGTCTGGGTCCAGGGCTaGCCCCTTGTGTCCACCATC +
Preference number: 4 (lower is better)
Translates to: DMRTMVISRHQLCPRASCVWVQG*PLVSTI
Trigger: GATGGTGGACACAAGGGGCCAGCCCTGGACCCAGAC...ACACGATGCTCTGGGACATAACTGGTGCCTGGAAATCACCATGGTCCTCATATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CCA 90 bp GATATGAGGACCATGGTGATTTCCAGGCACCAGTTATGTCCCAGAGCATCGTGTTTGAGCTGGAGGGTCTaGGTCCAGGGCTGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: DMRTMVISRHQLCPRASCLSWRV*VQGWPL
Trigger: AAGGGGCCAGCCCTGGACCCAGACCCTCCAGCTCAA...ACACGATGCTCTGGGACATAACTGGTGCCTGGAAATCACCATGGTCCTCATATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CCA 90 bp CAGGACAGGATTCCCATGGGAGATATGAGGACCATGGTGATTTCCAGGCACCAGCTTGTACCACGGGCCTaGGCACTGCATCGTACACCT +
Preference number: 4 (lower is better)
Translates to: QDRIPMGDMRTMVISRHQLVPRA*ALHRTP
Trigger: AGGTGTACGATGCAGTGCCCAGGCCCGTGGTACAAG...CTGGTGCCTGGAAATCACCATGGTCCTCATATCTCCCATGGGAATCCTGTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR TCA 90 bp GGGAGATATGAGGACCATGGTGATTTCCAGGCACCAGTTATGTCCCAGAGCATCGCACCTGTCCGTCTGTaGAGAGGCTGTGTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: GRYEDHGDFQAPVMSQSIAPVRL*RGCVVP
Trigger: TGGAACCACACAGCCTCTTCACAGACGGACAGGTGC...GATGCTCTGGGACATAACTGGTGCCTGGAAATCACCATGGTCCTCATATCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR TCA 90 bp GGGGAGGGAATGCCTTGGACTATTAATGTCCCCATGGATCTGGATCCTGGAGAACACTGTGCTGGAGCGTaGGGAAAGACTCTCCACCCT +
Preference number: 4 (lower is better)
Translates to: GEGMPWTINVPMDLDPGEHCAGA*GKTLHP
Trigger: AGGGTGGAGAGTCTTTCCTCACGCTCCAGCACAGTG...TTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCCAAGGCATTCCCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR TCA 90 bp TGGTTCTTCACTCTCTCAGTTTCAGGCAGGAAGACTCATCCTGAGCTGAGCTGCGTCCTTGGACAGGGCTaGCATCCTAGGTGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: WFFTLSVSGRKTHPELSCVLGQG*HPRWGD
Trigger: ATCTCCCCACCTAGGATGTCAGCCCTGTCCAAGGAC...GCAGCTCAGCTCAGGATGAGTCTTCCTGCCTGAAACTGAGAGAGTGAAGAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR GCA 90 bp GGCTGCTCCTTCGAGGCAGGACAGGATTCCCATGGGAGATATGAGGACCATGGTCAGGGTTGGAGACAATaGAGGAATAGGCCACATCTC +
Preference number: 4 (lower is better)
Translates to: GCSFEAGQDSHGRYEDHGQGWRQ*RNRPHL
Trigger: GAGATGTGGCCTATTCCTGCATTGTCTCCAACCCTG...ACCATGGTCCTCATATCTCCCATGGGAATCCTGTCCTGCCTCGAAGGAGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR GCA 90 bp GGCTGCTCCTTCGAGGCAGGACAGGATTCCCATGGGAGATATGAGGACCATGGTAGCATCGTGTGCCTGTaGAGTGGGGTTACTGATAGT +
Preference number: 4 (lower is better)
Translates to: GCSFEAGQDSHGRYEDHGSIVCL*SGVTDS
Trigger: ACTATCAGTAACCCCACTGCACAGGCACACGATGCT...ACCATGGTCCTCATATCTCCCATGGGAATCCTGTCCTGCCTCGAAGGAGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR GCA 90 bp CCTTCGAGGCAGGACAGGATTCCCATGGGAGATATGAGGACCATGGTGATTTCCTCCCAGAGCATCGTGTaGCTGTGCAGTGGGGTTACT +
Preference number: 4 (lower is better)
Translates to: PSRQDRIPMGDMRTMVISSQSIV*LCSGVT
Trigger: AGTAACCCCACTGCACAGGCACACGATGCTCTGGGA...GGAAATCACCATGGTCCTCATATCTCCCATGGGAATCCTGTCCTGCCTCGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR CCA 90 bp ATGCCTTGGACTATTAATGTCCCCATGGATCTGGATCCTGGAGAACTTCCAGTGAGGTTGCTGTGTAGCTaGGCTCGGCCCAGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: MPWTINVPMDLDPGELPVRLLCS*ARPRKR
Trigger: CCGCTTCCTGGGCCGAGCCCAGCTACACAGCAACCT...CACTGGAAGTTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCCAAGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CCA 90 bp TCCTGGATGGAATGTTCTGCTTGGCTCATCTTGCCCAGAGAAGAGCCAGGATATTGCTTCCTGTCCTCGTaGTGTGATGGCTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SWMECSAWLILPREEPGYCFLSS*CDGCPG
Trigger: GCCTGGGCAGCCATCACACCACGAGGACAGGAAGCA...ATATCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAGAACATTCCATCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR CCA 90 bp CAGTTATGTCCCAGAGCATCGTGTGCCTGTGCAGTGGGGTTACTGATAGTCCAGAGGTGTGAAACGTGCTaGTGCTTCCTGTCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: QLCPRASCACAVGLLIVQRCETC*CFLSSW
Trigger: CCACGAGGACAGGAAGCACCAGCACGTTTCACACCT...CTGGACTATCAGTAACCCCACTGCACAGGCACACGATGCTCTGGGACATAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR CCA 90 bp CTGGCCACTGTGCTGGAGCGTGAGGAAAGACTCTCCACCCTCACTCCCAGATCCGAACGTCCTGTTGGCTaGGGCAAATTCAGTATTTCT +
Preference number: 4 (lower is better)
Translates to: LATVLEREERLSTLTPRSERPVG*GKFSIS
Trigger: AGAAATACTGAATTTGCCCCAGCCAACAGGACGTTC...GGATCTGGGAGTGAGGGTGGAGAGTCTTTCCTCACGCTCCAGCACAGTGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR CAA 72 bp TGGTGCACCACGCTACAAACCACTGTCGAAATGAGGTaGCTAAGAGTCACCTTGTGGAGGGAGAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: WCTTLQTTVEMR*LRVTLWRESCR
Trigger: CCTGCAGCTCTCCCTCCACAAGGTGACTCTTAGCAACCTCATTTCGACAGTGGTTTGTAGCGTGGTGCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR TCA 90 bp TTCAACAAGGCCCTGGTGCACCACGCTACAAACCACTGTCGAAATGAGGTTGCTCAGGTCTTGGAGGGCTaGGCATCCCTTTCTACAGCA +
Preference number: 4 (lower is better)
Translates to: FNKALVHHATNHCRNEVAQVLEG*ASLSTA
Trigger: TGCTGTAGAAAGGGATGCTCAGCCCTCCAAGACCTG...AGCAACCTCATTTCGACAGTGGTTTGTAGCGTGGTGCACCAGGGCCTTGTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR TCA 90 bp CTGGCCACTGTGCTGGAGCGTGAGGAAAGACTCTCCACCCTCACTCCCAGATCCTTGGTTAATACTTTATaGATAGTGGTGGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LATVLEREERLSTLTPRSLVNTL*IVVGEG
Trigger: TCCCTCCCCCACCACTATTCATAAAGTATTAACCAA...GGATCTGGGAGTGAGGGTGGAGAGTCTTTCCTCACGCTCCAGCACAGTGGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR TCA 90 bp TGCCTTGGACTATTAATGTCCCCATGGATCTGGATCCTGGAGAACTTCCAGTGTATCCTGCAGGAGGCGTaGGAGCGGATGGAGATGGTG +
Preference number: 4 (lower is better)
Translates to: CLGLLMSPWIWILENFQCILQEA*ERMEMV
Trigger: CACCATCTCCATCCGCTCTCACGCCTCCTGCAGGAT...ACACTGGAAGTTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCCAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR TCA 90 bp GGATGGAATGTTCTGCTTGGCTCATCTTGCCCAGAGAAGAGCCAGGATATGAGAAGAGCTGCTTTGATCTaGGGTGGGGCCCTGGAGATG +
Preference number: 4 (lower is better)
Translates to: GWNVLLGSSCPEKSQDMRRAALI*GGALEM
Trigger: CATCTCCAGGGCCCCACCTCAGATCAAAGCAGCTCT...TCTCATATCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAGAACATTCCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR GCA 90 bp GCAAGAACGTCCTGTTGGCTGGGGCAAATTCAGTATTTCTTTTCCTGGCCACTGCTGGTCCCAGGGAAATaGTCAGCACCTGTCCGTCTG +
Preference number: 4 (lower is better)
Translates to: ARTSCWLGQIQYFFSWPLLVPGK*SAPVRL
Trigger: CAGACGGACAGGTGCTGAGCATTTCCCTGGGACCAG...CAGTGGCCAGGAAAAGAAATACTGAATTTGCCCCAGCCAACAGGACGTTCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR GCA 90 bp GTACCCAGCACATGCAGCGCCCTCAATCAATATTTGTTGTGGTGTGACTTACAAGATGGCTGCCCAGGCTaGTCCTTCGAGGCAGGACAG +
Preference number: 4 (lower is better)
Translates to: VPSTCSALNQYLLWCDLQDGCPG*SFEAGQ
Trigger: CTGTCCTGCCTCGAAGGAGCAGCCTGGGCAGCCATC...TTGTAAGTCACACCACAACAAATATTGATTGAGGGCGCTGCATGTGCTGGGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR GCA 90 bp CAGTTATGTCCCAGAGCATCGTGTGCCTGTGCAGTGGGGTTACTGATAGTCCAGTTTTCCTGGCCACTGTaGTGGAGCGTGAGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: QLCPRASCACAVGLLIVQFSWPL*WSVRKD
Trigger: GTCTTTCCTCACGCTCCAGCACAGTGGCCAGGAAAA...CTGGACTATCAGTAACCCCACTGCACAGGCACACGATGCTCTGGGACATAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR GCA 90 bp TTCAACAAGGCCCTGGTGCACCACGCTACAAACCACTGTCGAAATGAGGTTGCTTTGTGGAGGGAGAGCTaGAGGTCCCATCTCATCCAG +
Preference number: 4 (lower is better)
Translates to: FNKALVHHATNHCRNEVALWRES*RSHLIQ
Trigger: CTGGATGAGATGGGACCTGCAGCTCTCCCTCCACAA...AGCAACCTCATTTCGACAGTGGTTTGTAGCGTGGTGCACCAGGGCCTTGTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CCA 90 bp ATGCCTTGGACTATTAATGTCCCCATGGATCTGGATCCTGGAGAACTTCCAGTGATAGCCTCACGGACTTaGAAGCCAGGGGGACGCGCT +
Preference number: 4 (lower is better)
Translates to: MPWTINVPMDLDPGELPVIASRT*KPGGRA
Trigger: AGCGCGTCCCCCTGGCTTCCAAGTCCGTGAGGCTAT...CACTGGAAGTTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCCAAGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CCA 90 bp TTAATGTCCCCATGGATCTGGATCCTGGAGAACTTCCAGTGTCCTGGATGGAATTCGTACACCTTGAGCTaGAGGGTCTGGGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LMSPWIWILENFQCPGWNSYTLS*RVWVQG
Trigger: GCCCTGGACCCAGACCCTCCAGCTCAAGGTGTACGA...ATTCCATCCAGGACACTGGAAGTTCTCCAGGATCCAGATCCATGGGGACATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CCA 90 bp CCAGTTATGTCCCAGAGCATCGTGTGCCTGTGCAGTGGGGTTACTGATAGTCCAAAACCTGGCAGGTCTTaGAGGGCTGAGCATCCCTTT +
Preference number: 4 (lower is better)
Translates to: PVMSQSIVCLCSGVTDSPKPGRS*RAEHPF
Trigger: AAAGGGATGCTCAGCCCTCCAAGACCTGCCAGGTTT...TGGACTATCAGTAACCCCACTGCACAGGCACACGATGCTCTGGGACATAACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR CCA 90 bp CAGGACAGGATTCCCATGGGAGATATGAGGACCATGGTGATTTCCAGGCACCAGCACATCTCTGTCTCCTaGTCCCAGGGAAATGCTCAG +
Preference number: 4 (lower is better)
Translates to: QDRIPMGDMRTMVISRHQHISVS*SQGNAQ
Trigger: CTGAGCATTTCCCTGGGACCAGGAGACAGAGATGTG...CTGGTGCCTGGAAATCACCATGGTCCTCATATCTCCCATGGGAATCCTGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR CCA 90 bp TGGTTCTTCACTCTCTCAGTTTCAGGCAGGAAGACTCATCCTGAGCTGAGCTGCAGGTGTGAAACGTGCTaGTGCTTCCTGTCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: WFFTLSVSGRKTHPELSCRCETC*CFLSSW
Trigger: CCACGAGGACAGGAAGCACCAGCACGTTTCACACCT...GCAGCTCAGCTCAGGATGAGTCTTCCTGCCTGAAACTGAGAGAGTGAAGAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CCA 90 bp GGGGAGGGAATGCCTTGGACTATTAATGTCCCCATGGATCTGGATCCTGGAGAACTACAGTCCTGCTGTTaGGCTGTGGGGTCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: GEGMPWTINVPMDLDPGELQSCC*AVGSLS
Trigger: GGACAAAGACCCCACAGCCCAACAGCAGGACTGTAG...TTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCCAAGGCATTCCCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR CAA 72 bp CAAACCACTGTCGAAATGAGGTTGCTAAGAGTCACCTaGTGGAGGGAGAGCTGCAGGTCCCATCTCATCCAG +
Preference number: 4 (lower is better)
Translates to: QTTVEMRLLRVT*WRESCRSHLIQ
Trigger: CTGGATGAGATGGGACCTGCAGCTCTCCCTCCACAAGGTGACTCTTAGCAACCTCATTTCGACAGTGGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR TCA 90 bp GTCCTGGATGGAATGTTCTGCTTGGCTCATCTTGCCCAGAGAAGAGCCAGGATACCCTTTCTACAGCAATaGACACTTGTACCACGGGCC +
Preference number: 4 (lower is better)
Translates to: VLDGMFCLAHLAQRRARIPFLQQ*TLVPRA
Trigger: GGCCCGTGGTACAAGTGTTCATTGCTGTAGAAAGGG...TATCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAGAACATTCCATCCAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR TCA 90 bp CTGCTTGGCTCATCTTGCCCAGAGAAGAGCCAGGATATGAGAAGATGGGAGAGGTTTTGCATGATTCAGTaGCCAGGCATGTGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: LLGSSCPEKSQDMRRWERFCMIQ*PGMWPD
Trigger: GTCAGGCCACATGCCTGGTCACTGAATCATGCAAAA...CCTCTCCCATCTTCTCATATCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR GCA 90 bp TTAATGTCCCCATGGATCTGGATCCTGGAGAACTTCCAGTGTCCTGGATGGAATCTGGTCCCAGGGAAATaGTCAGCACCTGTCCGTCTG +
Preference number: 4 (lower is better)
Translates to: LMSPWIWILENFQCPGWNLVPGK*SAPVRL
Trigger: CAGACGGACAGGTGCTGAGCATTTCCCTGGGACCAG...ATTCCATCCAGGACACTGGAAGTTCTCCAGGATCCAGATCCATGGGGACATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR GCA 90 bp AATGTTCTGCTTGGCTCATCTTGCCCAGAGAAGAGCCAGGATATGAGAAGATGGGGGAGGTGTGAAACGTaGTGGTGCTTCCTGTCCTCG +
Preference number: 4 (lower is better)
Translates to: NVLLGSSCPEKSQDMRRWGRCET*WCFLSS
Trigger: CGAGGACAGGAAGCACCAGCACGTTTCACACCTCCC...CCATCTTCTCATATCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAGAACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR CCA 90 bp TGGACTATTAATGTCCCCATGGATCTGGATCCTGGAGAACTTCCAGTGTCCTGGCCATACCAAAGTCCATaGTTGTCTCCCGTCGCCAGC +
Preference number: 4 (lower is better)
Translates to: WTINVPMDLDPGELPVSWPYQSP*LSPVAS
Trigger: GCTGGCGACGGGAGACAACCATGGACTTTGGTATGG...CCAGGACACTGGAAGTTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR CCA 90 bp TCTGCTTGGCTCATCTTGCCCAGAGAAGAGCCAGGATATGAGAAGATGGGAGAGCACATCTCTGTCTCCTaGTCCCAGGGAAATGCTCAG +
Preference number: 4 (lower is better)
Translates to: SAWLILPREEPGYEKMGEHISVS*SQGNAQ
Trigger: CTGAGCATTTCCCTGGGACCAGGAGACAGAGATGTG...CTCTCCCATCTTCTCATATCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR CCA 90 bp CCTTCGAGGCAGGACAGGATTCCCATGGGAGATATGAGGACCATGGTGATTTCCCATGGATCTGGATCCTaGAGAACTTCCAGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: PSRQDRIPMGDMRTMVISHGSGS*RTSSVL
Trigger: CAGGACACTGGAAGTTCTCCAGGATCCAGATCCATG...GGAAATCACCATGGTCCTCATATCTCCCATGGGAATCCTGTCCTGCCTCGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR CCA 90 bp GATATGAGGACCATGGTGATTTCCAGGCACCAGTTATGTCCCAGAGCATCGTGTTCCTGGCCACTGTGCTaGAGCGTGAGGAAAGACTCT +
Preference number: 4 (lower is better)
Translates to: DMRTMVISRHQLCPRASCSWPLC*SVRKDS
Trigger: AGAGTCTTTCCTCACGCTCCAGCACAGTGGCCAGGA...ACACGATGCTCTGGGACATAACTGGTGCCTGGAAATCACCATGGTCCTCATATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CCA 90 bp TGGACTATTAATGTCCCCATGGATCTGGATCCTGGAGAACTTCCAGTGTCCTGGGGAAGAGTGGTGATGTaGATCTGGAGGCCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: WTINVPMDLDPGELPVSWGRVVM*IWRPAV
Trigger: CACAGCTGGCCTCCAGATCCACATCACCACTCTTCC...CCAGGACACTGGAAGTTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CCA 90 bp TCTGCTTGGCTCATCTTGCCCAGAGAAGAGCCAGGATATGAGAAGATGGGAGAGTGTTCAACAAGGCCCTaGTGCACCACGCTACAAACC +
Preference number: 4 (lower is better)
Translates to: SAWLILPREEPGYEKMGECSTRP*CTTLQT
Trigger: GGTTTGTAGCGTGGTGCACCAGGGCCTTGTTGAACA...CTCTCCCATCTTCTCATATCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CCA 90 bp GATGGCTGCCCAGGCTGCTCCTTCGAGGCAGGACAGGATTCCCATGGGAGATATTTTATTAGAGCAGTGTaGATCTGTTCAACAAGGCCC +
Preference number: 4 (lower is better)
Translates to: DGCPGCSFEAGQDSHGRYFIRAV*ICSTRP
Trigger: GGGCCTTGTTGAACAGATCCACACTGCTCTAATAAA...ATATCTCCCATGGGAATCCTGTCCTGCCTCGAAGGAGCAGCCTGGGCAGCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR TCA 90 bp GGATGGAATGTTCTGCTTGGCTCATCTTGCCCAGAGAAGAGCCAGGATATGAGACCCTTTCTACAGCAATaGACACTTGTACCACGGGCC +
Preference number: 4 (lower is better)
Translates to: GWNVLLGSSCPEKSQDMRPFLQQ*TLVPRA
Trigger: GGCCCGTGGTACAAGTGTTCATTGCTGTAGAAAGGG...TCTCATATCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAGAACATTCCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR TCA 90 bp TGTTGGCTGGGGCAAATTCAGTATTTCTTTTCCTGGCCACTGTGCTGGAGCGTGAGAAGAGCCAGGATATaGGAAGATGGGAGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: CWLGQIQYFFSWPLCWSVRRARI*EDGRGK
Trigger: CTTCCCTCTCCCATCTTCTCATATCCTGGCTCTTCT...CACGCTCCAGCACAGTGGCCAGGAAAAGAAATACTGAATTTGCCCCAGCCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR TCA 90 bp TCTGCTTGGCTCATCTTGCCCAGAGAAGAGCCAGGATATGAGAAGATGGGAGAGAGAAGAGCCAGGATATaGGAAGATGGGAGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: SAWLILPREEPGYEKMGERRARI*EDGRGK
Trigger: CTTCCCTCTCCCATCTTCTCATATCCTGGCTCTTCT...CTCTCCCATCTTCTCATATCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR TCA 90 bp CCTTCGAGGCAGGACAGGATTCCCATGGGAGATATGAGGACCATGGTGATTTCCGGTGTGGGAAAGGGATaGGAATTTGATAAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PSRQDRIPMGDMRTMVISGVGKG*EFDKAR
Trigger: CCTGGCTTTATCAAATTCTCATCCCTTTCCCACACC...GGAAATCACCATGGTCCTCATATCTCCCATGGGAATCCTGTCCTGCCTCGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR GCA 90 bp GGGAGATATGAGGACCATGGTGATTTCCAGGCACCAGTTATGTCCCAGAGCATCCAGGGTTGGAGACAATaGAGGAATAGGCCACATCTC +
Preference number: 4 (lower is better)
Translates to: GRYEDHGDFQAPVMSQSIQGWRQ*RNRPHL
Trigger: GAGATGTGGCCTATTCCTGCATTGTCTCCAACCCTG...GATGCTCTGGGACATAACTGGTGCCTGGAAATCACCATGGTCCTCATATCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR GCA 90 bp TTAATGTCCCCATGGATCTGGATCCTGGAGAACTTCCAGTGTCCTGGATGGAATTCCCAGAGCATCGTGTaGCTGTGCAGTGGGGTTACT +
Preference number: 4 (lower is better)
Translates to: LMSPWIWILENFQCPGWNSQSIV*LCSGVT
Trigger: AGTAACCCCACTGCACAGGCACACGATGCTCTGGGA...ATTCCATCCAGGACACTGGAAGTTCTCCAGGATCCAGATCCATGGGGACATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR GCA 90 bp GCAAGAACGTCCTGTTGGCTGGGGCAAATTCAGTATTTCTTTTCCTGGCCACTGTGTGAAACGTGCTGGTaGTTCCTGTCCTCGTGGTGT +
Preference number: 4 (lower is better)
Translates to: ARTSCWLGQIQYFFSWPLCETCW*FLSSWC
Trigger: ACACCACGAGGACAGGAAGCACCAGCACGTTTCACA...CAGTGGCCAGGAAAAGAAATACTGAATTTGCCCCAGCCAACAGGACGTTCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR GCA 90 bp GGGAGATATGAGGACCATGGTGATTTCCAGGCACCAGTTATGTCCCAGAGCATCCTGGATGGAATGTTCTaGTTGGCTCATCTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: GRYEDHGDFQAPVMSQSILDGMF*LAHLAQ
Trigger: CTGGGCAAGATGAGCCAAGCAGAACATTCCATCCAG...GATGCTCTGGGACATAACTGGTGCCTGGAAATCACCATGGTCCTCATATCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR GCA 90 bp GGGGAGGGAATGCCTTGGACTATTAATGTCCCCATGGATCTGGATCCTGGAGAATGGTGGGGGAGGGAATaGCTTGGACTATTAATGTCC +
Preference number: 4 (lower is better)
Translates to: GEGMPWTINVPMDLDPGEWWGRE*LGLLMS
Trigger: GGACATTAATAGTCCAAGGCATTCCCTCCCCCACCA...TTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCCAAGGCATTCCCTCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR CCA 90 bp TGGACTATTAATGTCCCCATGGATCTGGATCCTGGAGAACTTCCAGTGTCCTGGAGCCTCGGAAAAACGTaGCCAGGAGCTCTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: WTINVPMDLDPGELPVSWSLGKT*PGALLK
Trigger: CTTCAGAAGAGCTCCTGGCCACGTTTTTCCGAGGCT...CCAGGACACTGGAAGTTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CCA 90 bp TCCTGGATGGAATGTTCTGCTTGGCTCATCTTGCCCAGAGAAGAGCCAGGATATAAACCTGGCAGGTCTTaGAGGGCTGAGCATCCCTTT +
Preference number: 4 (lower is better)
Translates to: SWMECSAWLILPREEPGYKPGRS*RAEHPF
Trigger: AAAGGGATGCTCAGCCCTCCAAGACCTGCCAGGTTT...ATATCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAGAACATTCCATCCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR CCA 90 bp ATGCCTTGGACTATTAATGTCCCCATGGATCTGGATCCTGGAGAACTTCCAGTGCCATACCAAAGTCCATaGTTGTCTCCCGTCGCCAGC +
Preference number: 4 (lower is better)
Translates to: MPWTINVPMDLDPGELPVPYQSP*LSPVAS
Trigger: GCTGGCGACGGGAGACAACCATGGACTTTGGTATGG...CACTGGAAGTTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCCAAGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR CCA 90 bp TGGTTCTTCACTCTCTCAGTTTCAGGCAGGAAGACTCATCCTGAGCTGAGCTGCATGTCCCCATGGATCTaGATCCTGGAGAACTTCCAG +
Preference number: 4 (lower is better)
Translates to: WFFTLSVSGRKTHPELSCMSPWI*ILENFQ
Trigger: CTGGAAGTTCTCCAGGATCCAGATCCATGGGGACAT...GCAGCTCAGCTCAGGATGAGTCTTCCTGCCTGAAACTGAGAGAGTGAAGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CCA 90 bp GGGAGATATGAGGACCATGGTGATTTCCAGGCACCAGTTATGTCCCAGAGCATCATGTCCCCATGGATCTaGATCCTGGAGAACTTCCAG +
Preference number: 4 (lower is better)
Translates to: GRYEDHGDFQAPVMSQSIMSPWI*ILENFQ
Trigger: CTGGAAGTTCTCCAGGATCCAGATCCATGGGGACAT...GATGCTCTGGGACATAACTGGTGCCTGGAAATCACCATGGTCCTCATATCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR CCA 90 bp TGCCTTGGACTATTAATGTCCCCATGGATCTGGATCCTGGAGAACTTCCAGTGTGTGGTGATGTGGATCTaGAGGCCAGCTGTGCTGATC +
Preference number: 4 (lower is better)
Translates to: CLGLLMSPWIWILENFQCVVMWI*RPAVLI
Trigger: GATCAGCACAGCTGGCCTCCAGATCCACATCACCAC...ACACTGGAAGTTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCCAAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CCA 90 bp GGATGGAATGTTCTGCTTGGCTCATCTTGCCCAGAGAAGAGCCAGGATATGAGACAGGCAGGGAGGATCTaGGAACAATCGAGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: GWNVLLGSSCPEKSQDMRQAGRI*EQSSGR
Trigger: TCTTCCACTCGATTGTTCCCAGATCCTCCCTGCCTG...TCTCATATCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAGAACATTCCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CCA 90 bp GCAAGAACGTCCTGTTGGCTGGGGCAAATTCAGTATTTCTTTTCCTGGCCACTGTGCTTTGATCTGAGGTaGGGCCCTGGAGATGAACGA +
Preference number: 4 (lower is better)
Translates to: ARTSCWLGQIQYFFSWPLCFDLR*GPGDER
Trigger: TCGTTCATCTCCAGGGCCCCACCTCAGATCAAAGCA...CAGTGGCCAGGAAAAGAAATACTGAATTTGCCCCAGCCAACAGGACGTTCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CCA 90 bp AATGTTCTGCTTGGCTCATCTTGCCCAGAGAAGAGCCAGGATATGAGAAGATGGCTAAGAGTCACCTTGTaGAGGGAGAGCTGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: NVLLGSSCPEKSQDMRRWLRVTL*RESCRS
Trigger: GGACCTGCAGCTCTCCCTCCACAAGGTGACTCTTAG...CCATCTTCTCATATCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAGAACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CCA 90 bp GGAGATATGAGGACCATGGTGATTTCCAGGCACCAGTTATGTCCCAGAGCATCGATGACCATCTTTCTCTaGAGAGGCAGGCAAACTCCC +
Preference number: 4 (lower is better)
Translates to: GDMRTMVISRHQLCPRASMTIFL*RGRQTP
Trigger: GGGAGTTTGCCTGCCTCTCCAGAGAAAGATGGTCAT...CGATGCTCTGGGACATAACTGGTGCCTGGAAATCACCATGGTCCTCATATCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368104.4
3UTR CAA 72 bp CCAGTGTCCTGGATGGAATGTTCTGCTTGGCTCATCTaGCCCAGAGAAGAGCCAGGATATGAGAAGATGGGA +
Preference number: 4 (lower is better)
Translates to: PVSWMECSAWLI*PREEPGYEKMG
Trigger: TCCCATCTTCTCATATCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAGAACATTCCATCCAGGACACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR GCA 90 bp GCAAGAACGTCCTGTTGGCTGGGGCAAATTCAGTATTTCTTTTCCTGGCCACTGCTTTATGGCAGATCCTaGACAAGGGGGTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: ARTSCWLGQIQYFFSWPLLYGRS*TRGFSV
Trigger: GACAGAGAACCCCCTTGTGCAGGATCTGCCATAAAG...CAGTGGCCAGGAAAAGAAATACTGAATTTGCCCCAGCCAACAGGACGTTCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR GCA 90 bp TGCCTTGGACTATTAATGTCCCCATGGATCTGGATCCTGGAGAACTTCCAGTGTTGTGAAACGTGCTGGTaGTTCCTGTCCTCGTGGTGT +
Preference number: 4 (lower is better)
Translates to: CLGLLMSPWIWILENFQCCETCW*FLSSWC
Trigger: ACACCACGAGGACAGGAAGCACCAGCACGTTTCACA...ACACTGGAAGTTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCCAAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR GCA 90 bp GGGGAGGGAATGCCTTGGACTATTAATGTCCCCATGGATCTGGATCCTGGAGAACTCGGTGTCTACAACTaGAATTTACCTTTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: GEGMPWTINVPMDLDPGELGVYN*NLPLRA
Trigger: GGCCCTCAAAGGTAAATTGCAGTTGTAGACACCGAG...TTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCCAAGGCATTCCCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR GCA 90 bp ATGCCTTGGACTATTAATGTCCCCATGGATCTGGATCCTGGAGAACTTCCAGTGCATCTCATCCAGAGCTaGTTTGATCTGAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: MPWTINVPMDLDPGELPVHLIQS*FDLRWG
Trigger: GCCCCACCTCAGATCAAAGCAGCTCTGGATGAGATG...CACTGGAAGTTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCCAAGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CCA 90 bp CCAGTTATGTCCCAGAGCATCGTGTGCCTGTGCAGTGGGGTTACTGATAGTCCATCATATTGTCCTTTATaGCAGATCCTGCACAAGGGG +
Preference number: 4 (lower is better)
Translates to: PVMSQSIVCLCSGVTDSPSYCPL*QILHKG
Trigger: CCCCTTGTGCAGGATCTGCCATAAAGGACAATATGA...TGGACTATCAGTAACCCCACTGCACAGGCACACGATGCTCTGGGACATAACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR CCA 90 bp CCAGTTATGTCCCAGAGCATCGTGTGCCTGTGCAGTGGGGTTACTGATAGTCCACTATTAATGTCCCCATaGATCTGGATCCTGGAGAAC +
Preference number: 4 (lower is better)
Translates to: PVMSQSIVCLCSGVTDSPLLMSP*IWILEN
Trigger: GTTCTCCAGGATCCAGATCCATGGGGACATTAATAG...TGGACTATCAGTAACCCCACTGCACAGGCACACGATGCTCTGGGACATAACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR CCA 90 bp CAGTTATGTCCCAGAGCATCGTGTGCCTGTGCAGTGGGGTTACTGATAGTCCAGCTATTAATGTCCCCATaGATCTGGATCCTGGAGAAC +
Preference number: 4 (lower is better)
Translates to: QLCPRASCACAVGLLIVQLLMSP*IWILEN
Trigger: GTTCTCCAGGATCCAGATCCATGGGGACATTAATAG...CTGGACTATCAGTAACCCCACTGCACAGGCACACGATGCTCTGGGACATAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR TCA 90 bp GAGGGAATGCCTTGGACTATTAATGTCCCCATGGATCTGGATCCTGGAGAACTTTATAGGTTATTTCGCTaGTGTTGGGGGCCCAACAGG +
Preference number: 4 (lower is better)
Translates to: EGMPWTINVPMDLDPGELYRLFR*CWGPNR
Trigger: CCTGTTGGGCCCCCAACATCAGCGAAATAACCTATA...AAGTTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCCAAGGCATTCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR TCA 90 bp ATGCCTTGGACTATTAATGTCCCCATGGATCTGGATCCTGGAGAACTTCCAGTGTATAGGTTATTTCGCTaGTGTTGGGGGCCCAACAGG +
Preference number: 4 (lower is better)
Translates to: MPWTINVPMDLDPGELPVYRLFR*CWGPNR
Trigger: CCTGTTGGGCCCCCAACATCAGCGAAATAACCTATA...CACTGGAAGTTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCCAAGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR TCA 90 bp CCAGTTATGTCCCAGAGCATCGTGTGCCTGTGCAGTGGGGTTACTGATAGTCCATTGGTTAATACTTTATaGATAGTGGTGGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: PVMSQSIVCLCSGVTDSPLVNTL*IVVGEG
Trigger: TCCCTCCCCCACCACTATTCATAAAGTATTAACCAA...TGGACTATCAGTAACCCCACTGCACAGGCACACGATGCTCTGGGACATAACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR TCA 90 bp TGTTGGCTGGGGCAAATTCAGTATTTCTTTTCCTGGCCACTGTGCTGGAGCGTGAGACTCATCCTGAGCTaGGCTGCTTTTCTTGAAGTT +
Preference number: 4 (lower is better)
Translates to: CWLGQIQYFFSWPLCWSVRLILS*AAFLEV
Trigger: AACTTCAAGAAAAGCAGCTCAGCTCAGGATGAGTCT...CACGCTCCAGCACAGTGGCCAGGAAAAGAAATACTGAATTTGCCCCAGCCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR GCA 90 bp GAGGGAATGCCTTGGACTATTAATGTCCCCATGGATCTGGATCCTGGAGAACTTCTTTATGGCAGATCCTaGACAAGGGGGTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: EGMPWTINVPMDLDPGELLYGRS*TRGFSV
Trigger: GACAGAGAACCCCCTTGTGCAGGATCTGCCATAAAG...AAGTTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCCAAGGCATTCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR GCA 90 bp TGCCTTGGACTATTAATGTCCCCATGGATCTGGATCCTGGAGAACTTCCAGTGTAGCATCGTGTGCCTGTaGAGTGGGGTTACTGATAGT +
Preference number: 4 (lower is better)
Translates to: CLGLLMSPWIWILENFQCSIVCL*SGVTDS
Trigger: ACTATCAGTAACCCCACTGCACAGGCACACGATGCT...ACACTGGAAGTTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCCAAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR GCA 90 bp CAGCAATGCCTTGGCCCTCAGGAAGCATCAGATCTCAAACTGCAGGGTCTGGGGAAGCATCAGTCTCAATaGTCATTAGCACAAAATTGG +
Preference number: 4 (lower is better)
Translates to: QQCLGPQEASDLKLQGLGKHQSQ*SLAQNW
Trigger: CCAATTTTGTGCTAATGAGCATTGAGACTGATGCTT...CCCCAGACCCTGCAGTTTGAGATCTGATGCTTCCTGAGGGCCAAGGCATTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CCA 90 bp CTGGGGCTGAAGCTGATGCTGGCATGGGTGACTCAGAGTTCCTCTATTAGTTCAACTTTGCTCAGCACTTaGGCACCAGTAACTGTAATG +
Preference number: 4 (lower is better)
Translates to: LGLKLMLAWVTQSSSISSTLLST*APVTVM
Trigger: CATTACAGTTACTGGTGCCCAAGTGCTGAGCAAAGT...TGAACTAATAGAGGAACTCTGAGTCACCCATGCCAGCATCAGCTTCAGCCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CCA 90 bp GGGGAGGGAATGCCTTGGACTATTAATGTCCCCATGGATCTGGATCCTGGAGAATGTGAAGAGGCTGTGTaGTTCCATACCAAAGTCCAT +
Preference number: 4 (lower is better)
Translates to: GEGMPWTINVPMDLDPGECEEAV*FHTKVH
Trigger: ATGGACTTTGGTATGGAACCACACAGCCTCTTCACA...TTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCCAAGGCATTCCCTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR CCA 90 bp GAGGGAATGCCTTGGACTATTAATGTCCCCATGGATCTGGATCCTGGAGAACTTCATGGATCTGGATCCTaGAGAACTTCCAGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: EGMPWTINVPMDLDPGELHGSGS*RTSSVL
Trigger: CAGGACACTGGAAGTTCTCCAGGATCCAGATCCATG...AAGTTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCCAAGGCATTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR CCA 90 bp GAGGGAATGCCTTGGACTATTAATGTCCCCATGGATCTGGATCCTGGAGAACTTGGGGAGGGAATGCCTTaGACTATTAATGTCCCCATG +
Preference number: 4 (lower is better)
Translates to: EGMPWTINVPMDLDPGELGEGMP*TINVPM
Trigger: CATGGGGACATTAATAGTCCAAGGCATTCCCTCCCC...AAGTTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCCAAGGCATTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR CCA 90 bp GTCCTGGATGGAATGTTCTGCTTGGCTCATCTTGCCCAGAGAAGAGCCAGGATACTGGAGGCAATTCCTTaGTGCCAGTTGGTTAATACT +
Preference number: 4 (lower is better)
Translates to: VLDGMFCLAHLAQRRARILEAIP*CQLVNT
Trigger: AGTATTAACCAACTGGCACCAAGGAATTGCCTCCAG...TATCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAGAACATTCCATCCAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR CCA 90 bp AATGTTCTGCTTGGCTCATCTTGCCCAGAGAAGAGCCAGGATATGAGAAGATGGAAGCTGATGCTGGCATaGGTGACTCAGAGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: NVLLGSSCPEKSQDMRRWKLMLA*VTQSSS
Trigger: AGAGGAACTCTGAGTCACCCATGCCAGCATCAGCTT...CCATCTTCTCATATCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAGAACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CCA 90 bp GTACCCAGCACATGCAGCGCCCTCAATCAATATTTGTTGTGGTGTGACTTACAATGCCCATCTCAACCATaGGTTGTCAACCATCCTCGG +
Preference number: 4 (lower is better)
Translates to: VPSTCSALNQYLLWCDLQCPSQP*VVNHPR
Trigger: CCGAGGATGGTTGACAACCCATGGTTGAGATGGGCA...TTGTAAGTCACACCACAACAAATATTGATTGAGGGCGCTGCATGTGCTGGGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CCA 90 bp CAGTTATGTCCCAGAGCATCGTGTGCCTGTGCAGTGGGGTTACTGATAGTCCAGAAATCCAGTTACACCTaGGTGAGAGAAACTGTGAAC +
Preference number: 4 (lower is better)
Translates to: QLCPRASCACAVGLLIVQKSSYT*VRETVN
Trigger: GTTCACAGTTTCTCTCACCCAGGTGTAACTGGATTT...CTGGACTATCAGTAACCCCACTGCACAGGCACACGATGCTCTGGGACATAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CCA 90 bp CAGCAATGCCTTGGCCCTCAGGAAGCATCAGATCTCAAACTGCAGGGTCTGGGGTCATTAGCACAAAATTaGTCTCACAGAAGCACTTTG +
Preference number: 4 (lower is better)
Translates to: QQCLGPQEASDLKLQGLGSLAQN*SHRSTL
Trigger: CAAAGTGCTTCTGTGAGACCAATTTTGTGCTAATGA...CCCCAGACCCTGCAGTTTGAGATCTGATGCTTCCTGAGGGCCAAGGCATTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR TCA 90 bp GGATGGAATGTTCTGCTTGGCTCATCTTGCCCAGAGAAGAGCCAGGATATGAGAAGCGGATGGAGATGGTaGGGATGTCTATTAATATGG +
Preference number: 4 (lower is better)
Translates to: GWNVLLGSSCPEKSQDMRSGWRW*GCLLIW
Trigger: CCATATTAATAGACATCCTCACCATCTCCATCCGCT...TCTCATATCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAGAACATTCCATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR TCA 90 bp GGAATGCCTTGGACTATTAATGTCCCCATGGATCTGGATCCTGGAGAACTTCCACTGAGCTGCTTTTCTTaGAGTTGTGCAAGAACGTCC +
Preference number: 4 (lower is better)
Translates to: GMPWTINVPMDLDPGELPLSCFS*SCARTS
Trigger: GGACGTTCTTGCACAACTTCAAGAAAAGCAGCTCAG...TGGAAGTTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCCAAGGCATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR GCA 90 bp GTACCCAGCACATGCAGCGCCCTCAATCAATATTTGTTGTGGTGTGACTTACAACTGGATGGAATGTTCTaGTTGGCTCATCTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: VPSTCSALNQYLLWCDLQLDGMF*LAHLAQ
Trigger: CTGGGCAAGATGAGCCAAGCAGAACATTCCATCCAG...TTGTAAGTCACACCACAACAAATATTGATTGAGGGCGCTGCATGTGCTGGGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR GCA 90 bp CTGCTTGGCTCATCTTGCCCAGAGAAGAGCCAGGATATGAGAAGATGGGAGAGGGAGGCAATTCCTTGGTaGCAGTTGGTTAATACTTTA +
Preference number: 4 (lower is better)
Translates to: LLGSSCPEKSQDMRRWEREAIPW*QLVNTL
Trigger: TAAAGTATTAACCAACTGGCACCAAGGAATTGCCTC...CCTCTCCCATCTTCTCATATCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR GCA 90 bp GGAATGCCTTGGACTATTAATGTCCCCATGGATCTGGATCCTGGAGAACTTCCACTTTTCTTACAGCAATaGCTTGGCCCTCAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: GMPWTINVPMDLDPGELPLFLQQ*LGPQEA
Trigger: TGCTTCCTGAGGGCCAAGGCATTGCTGTAAGAAAAG...TGGAAGTTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCCAAGGCATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR GCA 90 bp TGGTTCTTCACTCTCTCAGTTTCAGGCAGGAAGACTCATCCTGAGCTGAGCTGCCTTTTCTTGAAGTTGTaGAAGAACGTCCTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: WFFTLSVSGRKTHPELSCLFLKL*KNVLLA
Trigger: AGCCAACAGGACGTTCTTGCACAACTTCAAGAAAAG...GCAGCTCAGCTCAGGATGAGTCTTCCTGCCTGAAACTGAGAGAGTGAAGAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR GCA 90 bp TTTTCTTACAGCAATGCCTTGGCCCTCAGGAAGCATCAGATCTCAAACTGCAGGTGGCAGATTCTAGAGTaGCTCAGTACCCTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: FSYSNALALRKHQISNCRWQILE*LSTLSL
Trigger: GAGAGAAAGGGTACTGAGGCACTCTAGAATCTGCCA...CCTGCAGTTTGAGATCTGATGCTTCCTGAGGGCCAAGGCATTGCTGTAAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CCA 90 bp TGGCCCTCAGGAAGCATCAGATCTCAAACTGCAGGGTCTGGGGCTGAAGCTGATGGATGTCTATTAATATaGTGTTTCCTGCAAAACGGT +
Preference number: 4 (lower is better)
Translates to: WPSGSIRSQTAGSGAEADGCLLI*CFLQNG
Trigger: ACCGTTTTGCAGGAAACACCATATTAATAGACATCC...ATCAGCTTCAGCCCCAGACCCTGCAGTTTGAGATCTGATGCTTCCTGAGGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CCA 90 bp GATATGAGGACCATGGTGATTTCCAGGCACCAGTTATGTCCCAGAGCATCGTGTCGCTGTTATCAAGACTaGATTGAGGCCCCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: DMRTMVISRHQLCPRASCRCYQD*IEAPEK
Trigger: TTTTTCTGGGGCCTCAATCCAGTCTTGATAACAGCG...ACACGATGCTCTGGGACATAACTGGTGCCTGGAAATCACCATGGTCCTCATATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CCA 90 bp TTAATGTCCCCATGGATCTGGATCCTGGAGAACTTCCAGTGTCCTGGATGGAATCTGGGAACAATCGAGTaGAAGAGTGGTGATGTGGAT +
Preference number: 4 (lower is better)
Translates to: LMSPWIWILENFQCPGWNLGTIE*KSGDVD
Trigger: ATCCACATCACCACTCTTCCACTCGATTGTTCCCAG...ATTCCATCCAGGACACTGGAAGTTCTCCAGGATCCAGATCCATGGGGACATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CCA 90 bp GCAAGAACGTCCTGTTGGCTGGGGCAAATTCAGTATTTCTTTTCCTGGCCACTGCTCATTGTCAGATCCTaGGCTTTCCTTTCCACATCA +
Preference number: 4 (lower is better)
Translates to: ARTSCWLGQIQYFFSWPLLIVRS*AFLSTS
Trigger: TGATGTGGAAAGGAAAGCCCAGGATCTGACAATGAG...CAGTGGCCAGGAAAAGAAATACTGAATTTGCCCCAGCCAACAGGACGTTCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR TCA 90 bp CTTCTGCATAGCGTTTTATGGTTCTTCACTCTCTCAGTTTCAGGCAGGAAGACTGAGGCCAGTTTTGCATaGTTCAGTGACCAGGCATGT +
Preference number: 4 (lower is better)
Translates to: LLHSVLWFFTLSVSGRKTEASFA*FSDQAC
Trigger: ACATGCCTGGTCACTGAATCATGCAAAACTGGCCTC...AGTCTTCCTGCCTGAAACTGAGAGAGTGAAGAACCATAAAACGCTATGCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR TCA 90 bp TTTTCTTACAGCAATGCCTTGGCCCTCAGGAAGCATCAGATCTCAAACTGCAGGCCACTAGTTGACAAGTaGGTCATTAAGGATGGGAAC +
Preference number: 4 (lower is better)
Translates to: FSYSNALALRKHQISNCRPLVDK*VIKDGN
Trigger: GTTCCCATCCTTAATGACTCACTTGTCAACTAGTGG...CCTGCAGTTTGAGATCTGATGCTTCCTGAGGGCCAAGGCATTGCTGTAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CCA 90 bp TGCCTTGGACTATTAATGTCCCCATGGATCTGGATCCTGGAGAACTTCCAGTGTTGTGAAGAGGCTGTGTaGTTCCATACCAAAGTCCAT +
Preference number: 4 (lower is better)
Translates to: CLGLLMSPWIWILENFQCCEEAV*FHTKVH
Trigger: ATGGACTTTGGTATGGAACCACACAGCCTCTTCACA...ACACTGGAAGTTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCCAAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR CCA 90 bp GAATGTTCTGCTTGGCTCATCTTGCCCAGAGAAGAGCCAGGATATGAGAAGATGTCATATTGTCCTTTATaGCAGATCCTGCACAAGGGG +
Preference number: 4 (lower is better)
Translates to: ECSAWLILPREEPGYEKMSYCPL*QILHKG
Trigger: CCCCTTGTGCAGGATCTGCCATAAAGGACAATATGA...CATCTTCTCATATCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAGAACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR CCA 90 bp ATGCCTTGGACTATTAATGTCCCCATGGATCTGGATCCTGGAGAACTTCCAGTGCTGGAGGCAATTCCTTaGTGCCAGTTGGTTAATACT +
Preference number: 4 (lower is better)
Translates to: MPWTINVPMDLDPGELPVLEAIP*CQLVNT
Trigger: AGTATTAACCAACTGGCACCAAGGAATTGCCTCCAG...CACTGGAAGTTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCCAAGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
3UTR CAA 72 bp TGTTTCCTGCAAAACGGTGCCCATCTCAACCATGGGTaGTCAACCATCCTCGGTGTCTACAACTGCAATTTA +
Preference number: 4 (lower is better)
Translates to: CFLQNGAHLNHG*STILGVYNCNL
Trigger: TAAATTGCAGTTGTAGACACCGAGGATGGTTGACAACCCATGGTTGAGATGGGCACCGTTTTGCAGGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR TCA 90 bp AGTCTTCTGCATTTGCATTTGAAAATGAATGTGGCAGATTCTAGAGTGCCTCAGCCTAGGTGGGGAGATTaGAGCCACCCTGGGAAAATA +
Preference number: 4 (lower is better)
Translates to: SLLHLHLKMNVADSRVPQPRWGD*SHPGKI
Trigger: TATTTTCCCAGGGTGGCTTCAATCTCCCCACCTAGG...CTGAGGCACTCTAGAATCTGCCACATTCATTTTCAAATGCAAATGCAGAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR TCA 90 bp TTGTTTATTTATATTATCCAGACCATAAACTCTCAAAGGCAAGGGTTTCGCTTGCATCCAGAGCTGCTTTaGTCTGAGGTGGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LFIYIIQTINSQRQGFRLHPELL*SEVGPW
Trigger: CCAGGGCCCCACCTCAGATCAAAGCAGCTCTGGATG...CAAGCGAAACCCTTGCCTTTGAGAGTTTATGGTCTGGATAATATAAATAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR TCA 90 bp CTGGGGCTGAAGCTGATGCTGGCATGGGTGACTCAGAGTTCCTCTATTAGTTCAATATTTGTTGTGGTGTaGCTTACAAAGCATCAGTCT +
Preference number: 4 (lower is better)
Translates to: LGLKLMLAWVTQSSSISSIFVVV*LTKHQS
Trigger: AGACTGATGCTTTGTAAGTCACACCACAACAAATAT...TGAACTAATAGAGGAACTCTGAGTCACCCATGCCAGCATCAGCTTCAGCCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR GCA 90 bp TTGTTTATTTATATTATCCAGACCATAAACTCTCAAAGGCAAGGGTTTCGCTTGTCGTGGTGTGATGGCTaGCCAGGCTGCTCCTTCGAG +
Preference number: 4 (lower is better)
Translates to: LFIYIIQTINSQRQGFRLSWCDG*PGCSFE
Trigger: CTCGAAGGAGCAGCCTGGGCAGCCATCACACCACGA...CAAGCGAAACCCTTGCCTTTGAGAGTTTATGGTCTGGATAATATAAATAAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR GCA 90 bp TTCTTGAAGTTGTGCAAGAACGTCCTGTTGGCTGGGGCAAATTCAGTATTTCTTTGGTGGGGGAGGGAATaGCTTGGACTATTAATGTCC +
Preference number: 4 (lower is better)
Translates to: FLKLCKNVLLAGANSVFLWWGRE*LGLLMS
Trigger: GGACATTAATAGTCCAAGGCATTCCCTCCCCCACCA...AAGAAATACTGAATTTGCCCCAGCCAACAGGACGTTCTTGCACAACTTCAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR GCA 90 bp GTACCCAGCACATGCAGCGCCCTCAATCAATATTTGTTGTGGTGTGACTTACAACTACTGATTCCCAAGTaGCAAGAAATGTACCCAGCA +
Preference number: 4 (lower is better)
Translates to: VPSTCSALNQYLLWCDLQLLIPK*QEMYPA
Trigger: TGCTGGGTACATTTCTTGGCACTTGGGAATCAGTAG...TTGTAAGTCACACCACAACAAATATTGATTGAGGGCGCTGCATGTGCTGGGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CCA 90 bp GCAAGAACGTCCTGTTGGCTGGGGCAAATTCAGTATTTCTTTTCCTGGCCACTGCTGCATAGCGTTTTATaGTTCTTCACTCTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: ARTSCWLGQIQYFFSWPLLHSVL*FFTLSV
Trigger: AACTGAGAGAGTGAAGAACCATAAAACGCTATGCAG...CAGTGGCCAGGAAAAGAAATACTGAATTTGCCCCAGCCAACAGGACGTTCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR GCA 90 bp ATGCCTTGGACTATTAATGTCCCCATGGATCTGGATCCTGGAGAACTTCCAGTGGAGGCAATTCCTTGGTaGCAGTTGGTTAATACTTTA +
Preference number: 4 (lower is better)
Translates to: MPWTINVPMDLDPGELPVEAIPW*QLVNTL
Trigger: TAAAGTATTAACCAACTGGCACCAAGGAATTGCCTC...CACTGGAAGTTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCCAAGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR CCA 90 bp TTCTTGAAGTTGTGCAAGAACGTCCTGTTGGCTGGGGCAAATTCAGTATTTCTTGCAAGAACGTCCTGTTaGCTGGGGCAAATTCAGTAT +
Preference number: 4 (lower is better)
Translates to: FLKLCKNVLLAGANSVFLARTSC*LGQIQY
Trigger: ATACTGAATTTGCCCCAGCCAACAGGACGTTCTTGC...AAGAAATACTGAATTTGCCCCAGCCAACAGGACGTTCTTGCACAACTTCAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289707.10
3UTR CAA 72 bp AATGTACCCAGCACATGCAGCGCCCTCAATCAATATTaGTTGTGGTGTGACTTACAAAGCATCAGTCTCAAT +
Preference number: 4 (lower is better)
Translates to: NVPSTCSALNQY*LWCDLQSISLN
Trigger: ATTGAGACTGATGCTTTGTAAGTCACACCACAACAAATATTGATTGAGGGCGCTGCATGTGCTGGGTACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CCA 90 bp CTTCTGCATAGCGTTTTATGGTTCTTCACTCTCTCAGTTTCAGGCAGGAAGACTAGATTGAAGCCACCCTaGGAAAATAGTACTTCAAAC +
Preference number: 4 (lower is better)
Translates to: LLHSVLWFFTLSVSGRKTRLKPP*ENSTSN
Trigger: GTTTGAAGTACTATTTTCCCAGGGTGGCTTCAATCT...AGTCTTCCTGCCTGAAACTGAGAGAGTGAAGAACCATAAAACGCTATGCAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR GCA 90 bp TTGTTTATTTATATTATCCAGACCATAAACTCTCAAAGGCAAGGGTTTCGCTTGTTTCCTGCAAAACGGTaGCCATCTCAACCATGGGTT +
Preference number: 4 (lower is better)
Translates to: LFIYIIQTINSQRQGFRLFPAKR*PSQPWV
Trigger: AACCCATGGTTGAGATGGGCACCGTTTTGCAGGAAA...CAAGCGAAACCCTTGCCTTTGAGAGTTTATGGTCTGGATAATATAAATAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS CCA 90 bp AGCTCTTCTGAAGGCCAGAGAGATCGCCAGATAGCCTCACGGACTTaGAAGCCAGGGGGACGCGCTGCCACCAGCAGCACCGAGCCCCCG +
Preference number: 5 (lower is better)
Translates to: SSSEGQRDRQIASRT*KPGGRAATSSTEPP
Trigger: CGGGGGCTCGGTGCTGCTGGTGGCAGCGCGTCCCCCTGGCTTCCAAGTCCGTGAGGCTATCTGGCGATCTCTCTGGCCTTCAGAAGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS CCA 90 bp CCAGACTCCAGCGGCCCGAGCTCCAGGCTGAGGTTGCTGTGTAGCTaGGCTCGGCCCAGGAAGCGGGAATGGTACAGAGTCTCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: PDSSGPSSRLRLLCS*ARPRKREWYRVSRE
Trigger: CTCCCTGGAGACTCTGTACCATTCCCGCTTCCTGGGCCGAGCCCAGCTACACAGCAACCTCAGCCTGGAGCTCGGGCCGCTGGAGTCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000471286.5
CDS TCA 90 bp AGAAGTTGCCGCTGTCTCCAGACTCCAGCGGCCCGAGCTCCAGGCTaGGGTTGCTGTGTAGCTGGGCTCGGCCCAGGAAGCGGGAATGGT +
Preference number: 5 (lower is better)
Translates to: RSCRCLQTPAARAPG*GCCVAGLGPGSGNG
Trigger: ACCATTCCCGCTTCCTGGGCCGAGCCCAGCTACACAGCAACCTCAGCCTGGAGCTCGGGCCGCTGGAGTCTGGAGACAGCGGCAACTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000471286.5
CDS CCA 90 bp ACCACGGGCCTGGGCACTGCATCGTACACCTTGAGCTGGAGGGTCTaGGTCCAGGGCTGGCCCCTTGTGTCCACCATCAACACGGAGAAG +
Preference number: 5 (lower is better)
Translates to: TTGLGTASYTLSWRV*VQGWPLVSTINTEK
Trigger: CTTCTCCGTGTTGATGGTGGACACAAGGGGCCAGCCCTGGACCCAGACCCTCCAGCTCAAGGTGTACGATGCAGTGCCCAGGCCCGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000471286.5
CDS GCA 90 bp GTCACCTTGTGGAGGGAGAGCTGCAGGTCCCATCTCATCCAGAGCTaGTTTGATCTGAGGTGGGGCCCTGAGCAGGGGCACCAGTGCCAG +
Preference number: 5 (lower is better)
Translates to: VTLWRESCRSHLIQS*FDLRWGPEQGHQCQ
Trigger: CTGGCACTGGTGCCCCTGCTCAGGGCCCCACCTCAGATCAAAGCAGCTCTGGATGAGATGGGACCTGCAGCTCTCCCTCCACAAGGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471286.5
CDS CCA 90 bp AGGCTGAGGTTGCTGTGTAGCTGGGCTCGGCCCAGGAAGCGGGAATaGTACAGAGTCTCCAGGGAGCCTCGGAAAAACGTGGCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: RLRLLCSWARPRKRE*YRVSREPRKNVARS
Trigger: GCTCCTGGCCACGTTTTTCCGAGGCTCCCTGGAGACTCTGTACCATTCCCGCTTCCTGGGCCGAGCCCAGCTACACAGCAACCTCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS CCA 90 bp GGCACTGCATCGTACACCTTGAGCTGGAGGGTCTGGGTCCAGGGCTaGCCCCTTGTGTCCACCATCAACACGGAGAAGTTGCCGCTGTCT +
Preference number: 5 (lower is better)
Translates to: GTASYTLSWRVWVQG*PLVSTINTEKLPLS
Trigger: AGACAGCGGCAACTTCTCCGTGTTGATGGTGGACACAAGGGGCCAGCCCTGGACCCAGACCCTCCAGCTCAAGGTGTACGATGCAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000471286.5
CDS-3UTR CAA 90 bp CAGGGAACCTCTGAGCAGGCCAGGCAGGGAGGATCTGGGAACAATCGAGTGGAAAGCTCCAGGCTGAGGTaGCTGTGTAGCTGGGCTCGG +
Preference number: 5 (lower is better)
Translates to: QGTSEQARQGGSGNNRVESSRLR*LCSWAR
Trigger: CCGAGCCCAGCTACACAGCAACCTCAGCCTGGAGCT...TTCCACTCGATTGTTCCCAGATCCTCCCTGCCTGGCCTGCTCAGAGGTTCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CAA 90 bp CCTTCGAGGCAGGACAGGATTCCCATGGGAGATATGAGGACCATGGTGATTTCCGATAGCCTCACGGACTaGGAAGCCAGGGGGACGCGC +
Preference number: 5 (lower is better)
Translates to: PSRQDRIPMGDMRTMVISDSLTD*EARGTR
Trigger: GCGCGTCCCCCTGGCTTCCAAGTCCGTGAGGCTATC...GGAAATCACCATGGTCCTCATATCTCCCATGGGAATCCTGTCCTGCCTCGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CAA 90 bp TGGTGTGATGGCTGCCCAGGCTGCTCCTTCGAGGCAGGACAGGATTCCCATGGGTACCAAAGTCCATGGTaGTCTCCCGTCGCCAGCTAT +
Preference number: 5 (lower is better)
Translates to: WCDGCPGCSFEAGQDSHGYQSPW*SPVASY
Trigger: ATAGCTGGCGACGGGAGACAACCATGGACTTTGGTA...CCCATGGGAATCCTGTCCTGCCTCGAAGGAGCAGCCTGGGCAGCCATCACACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS TCA 90 bp TGGGCACTGCATCTTCCCAGAGAAGCAGACTCCACAGGGGCCTCATaGCCATCTTTCTCTGGAGAGGCAGGCAAACTCCCTCGACAGCCA +
Preference number: 5 (lower is better)
Translates to: WALHLPREADSTGAS*PSFSGEAGKLPRQP
Trigger: TGGCTGTCGAGGGAGTTTGCCTGCCTCTCCAGAGAAAGATGGTCATGAGGCCCCTGTGGAGTCTGCTTCTCTGGGAAGATGCAGTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368104.4
CDS-3UTR CAA 90 bp CCTTCGAGGCAGGACAGGATTCCCATGGGAGATATGAGGACCATGGTGATTTCCTCCAGGGCTGGCCCCTaGTGTCCACCATCAACACGG +
Preference number: 5 (lower is better)
Translates to: PSRQDRIPMGDMRTMVISSRAGP*CPPSTR
Trigger: CCGTGTTGATGGTGGACACAAGGGGCCAGCCCTGGA...GGAAATCACCATGGTCCTCATATCTCCCATGGGAATCCTGTCCTGCCTCGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CAA 90 bp GATGGCTGCCCAGGCTGCTCCTTCGAGGCAGGACAGGATTCCCATGGGAGATATTCTGCTTGGCTCATCTaGCCCAGAGAAGAGCCAGGA +
Preference number: 5 (lower is better)
Translates to: DGCPGCSFEAGQDSHGRYSAWLI*PREEPG
Trigger: TCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAGA...ATATCTCCCATGGGAATCCTGTCCTGCCTCGAAGGAGCAGCCTGGGCAGCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR CAA 90 bp TGGCCCTCAGGAAGCATCAGATCTCAAACTGCAGGGTCTGGGGCTGAAGCTGATACTGCATCGTACACCTaGAGCTGGAGGGTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: WPSGSIRSQTAGSGAEADTASYT*SWRVWV
Trigger: GACCCAGACCCTCCAGCTCAAGGTGTACGATGCAGT...ATCAGCTTCAGCCCCAGACCCTGCAGTTTGAGATCTGATGCTTCCTGAGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CAA 90 bp CAGGGAACCTCTGAGCAGGCCAGGCAGGGAGGATCTGGGAACAATCGAGTGGAATCTTACAGCAATGCCTaGGCCCTCAGGAAGCATCAG +
Preference number: 5 (lower is better)
Translates to: QGTSEQARQGGSGNNRVESYSNA*ALRKHQ
Trigger: CTGATGCTTCCTGAGGGCCAAGGCATTGCTGTAAGA...TTCCACTCGATTGTTCCCAGATCCTCCCTGCCTGGCCTGCTCAGAGGTTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS TCA 90 bp TTGGGGGCCCAACAGGACAAGAAAACCTGGCAGGTCTTGGAGGGCTaGGCATCCCTTTCTACAGCAATGAACACTTGTACCACGGGCCTG +
Preference number: 5 (lower is better)
Translates to: LGAQQDKKTWQVLEG*ASLSTAMNTCTTGL
Trigger: CAGGCCCGTGGTACAAGTGTTCATTGCTGTAGAAAGGGATGCTCAGCCCTCCAAGACCTGCCAGGTTTTCTTGTCCTGTTGGGCCCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289707.10
ENST00000368104.4
ENST00000471286.5
CDS CCA 90 bp TCCCAGAGAAGCAGACTCCACAGGGGCCTCATGACCATCTTTCTCTaGAGAGGCAGGCAAACTCCCTCGACAGCCAAAATCCAGAACCTC +
Preference number: 5 (lower is better)
Translates to: SQRSRLHRGLMTIFL*RGRQTPSTAKIQNL
Trigger: GAGGTTCTGGATTTTGGCTGTCGAGGGAGTTTGCCTGCCTCTCCAGAGAAAGATGGTCATGAGGCCCCTGTGGAGTCTGCTTCTCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368104.4
CDS TCA 90 bp AAACCTGGCAGGTCTTGGAGGGCTGAGCATCCCTTTCTACAGCAATaGACACTTGTACCACGGGCCTGGGCACTGCATCTTCCCAGAGAA +
Preference number: 5 (lower is better)
Translates to: KPGRSWRAEHPFLQQ*TLVPRAWALHLPRE
Trigger: TTCTCTGGGAAGATGCAGTGCCCAGGCCCGTGGTACAAGTGTTCATTGCTGTAGAAAGGGATGCTCAGCCCTCCAAGACCTGCCAGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368104.4
CDS CCA 90 bp TCCCAGGGAAATGCTCAGCACCTGTCCGTCTGTGAAGAGGCTGTGTaGTTCCATACCAAAGTCCATGGTTGTCTCCCGTCGCCAGCTATA +
Preference number: 5 (lower is better)
Translates to: SQGNAQHLSVCEEAV*FHTKVHGCLPSPAI
Trigger: TATAGCTGGCGACGGGAGACAACCATGGACTTTGGTATGGAACCACACAGCCTCTTCACAGACGGACAGGTGCTGAGCATTTCCCTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289707.10
ENST00000368104.4
ENST00000471286.5
CDS-3UTR CAA 90 bp TGGTGTGATGGCTGCCCAGGCTGCTCCTTCGAGGCAGGACAGGATTCCCATGGGAGGCATCAGTTCATATaGTCCTTTATGGCAGATCCT +
Preference number: 5 (lower is better)
Translates to: WCDGCPGCSFEAGQDSHGRHQFI*SFMADP
Trigger: AGGATCTGCCATAAAGGACAATATGAACTGATGCCT...CCCATGGGAATCCTGTCCTGCCTCGAAGGAGCAGCCTGGGCAGCCATCACACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR CAA 90 bp CAGTTATGTCCCAGAGCATCGTGTGCCTGTGCAGTGGGGTTACTGATAGTCCAGTCTGCTTGGCTCATCTaGCCCAGAGAAGAGCCAGGA +
Preference number: 5 (lower is better)
Translates to: QLCPRASCACAVGLLIVQSAWLI*PREEPG
Trigger: TCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAGA...CTGGACTATCAGTAACCCCACTGCACAGGCACACGATGCTCTGGGACATAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR CAA 90 bp TGTTGGCTGGGGCAAATTCAGTATTTCTTTTCCTGGCCACTGTGCTGGAGCGTGGTGCAAGCTGACAGGTaGAGTGGCCATGGACCCTGT +
Preference number: 5 (lower is better)
Translates to: CWLGQIQYFFSWPLCWSVVQADR*SGHGPC
Trigger: ACAGGGTCCATGGCCACTCAACCTGTCAGCTTGCAC...CACGCTCCAGCACAGTGGCCAGGAAAAGAAATACTGAATTTGCCCCAGCCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS TCA 90 bp CAAAGTCCATGGTTGTCTCCCGTCGCCAGCTATAGGTTATTTCGCTaGTGTTGGGGGCCCAACAGGACAAGAAAACCTGGCAGGTCTTGG +
Preference number: 5 (lower is better)
Translates to: QSPWLSPVASYRLFR*CWGPNRTRKPGRSW
Trigger: CCAAGACCTGCCAGGTTTTCTTGTCCTGTTGGGCCCCCAACATCAGCGAAATAACCTATAGCTGGCGACGGGAGACAACCATGGACTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289707.10
ENST00000368104.4
ENST00000471286.5
CDS-3UTR CAA 90 bp CCAGTTATGTCCCAGAGCATCGTGTGCCTGTGCAGTGGGGTTACTGATAGTCCAGTTATTTCGCTGATGTaGGGGGCCCAACAGGACAAG +
Preference number: 5 (lower is better)
Translates to: PVMSQSIVCLCSGVTDSPVISLM*GAQQDK
Trigger: CTTGTCCTGTTGGGCCCCCAACATCAGCGAAATAAC...TGGACTATCAGTAACCCCACTGCACAGGCACACGATGCTCTGGGACATAACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR CAA 90 bp GGCTGCTCCTTCGAGGCAGGACAGGATTCCCATGGGAGATATGAGGACCATGGTGCTGAGCTGCTTTTCTaGAAGTTGTGCAAGAACGTC +
Preference number: 5 (lower is better)
Translates to: GCSFEAGQDSHGRYEDHGAELLF*KLCKNV
Trigger: GACGTTCTTGCACAACTTCAAGAAAAGCAGCTCAGC...ACCATGGTCCTCATATCTCCCATGGGAATCCTGTCCTGCCTCGAAGGAGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CAA 90 bp GGGGAGGGAATGCCTTGGACTATTAATGTCCCCATGGATCTGGATCCTGGAGAAGAAGAGGGAAGGTCCTaGGACAGGGCTGACATCCTA +
Preference number: 5 (lower is better)
Translates to: GEGMPWTINVPMDLDPGEEEGRS*DRADIL
Trigger: TAGGATGTCAGCCCTGTCCAAGGACCTTCCCTCTTC...TTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCCAAGGCATTCCCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CAA 90 bp TGGTTCTTCACTCTCTCAGTTTCAGGCAGGAAGACTCATCCTGAGCTGAGCTGCATCCACCAGGGCTCATaGTCAGATCCTGGGCTTTCC +
Preference number: 5 (lower is better)
Translates to: WFFTLSVSGRKTHPELSCIHQGS*SDPGLS
Trigger: GGAAAGCCCAGGATCTGACAATGAGCCCTGGTGGAT...GCAGCTCAGCTCAGGATGAGTCTTCCTGCCTGAAACTGAGAGAGTGAAGAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CAA 90 bp AGGGAAGGGGGAGGTGTGAAACGTGCTGGTGCTTCCTGTCCTCGTGGTGTGATGAGGCATCAGTTCATATaGTCCTTTATGGCAGATCCT +
Preference number: 5 (lower is better)
Translates to: REGGGVKRAGASCPRGVMRHQFI*SFMADP
Trigger: AGGATCTGCCATAAAGGACAATATGAACTGATGCCT...CATCACACCACGAGGACAGGAAGCACCAGCACGTTTCACACCTCCCCCTTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR CAA 90 bp GATATGAGGACCATGGTGATTTCCAGGCACCAGTTATGTCCCAGAGCATCGTGTTCTACAGTCCTGCTGTaGGGCTGTGGGGTCTTTGTC +
Preference number: 5 (lower is better)
Translates to: DMRTMVISRHQLCPRASCSTVLL*GCGVFV
Trigger: GACAAAGACCCCACAGCCCAACAGCAGGACTGTAGA...ACACGATGCTCTGGGACATAACTGGTGCCTGGAAATCACCATGGTCCTCATATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS GCA 90 bp CTGATAGTCCAGGCATCAGTTCATATTGTCCTTTATGGCAGATCCTaGACAAGGGGGTTCTCTGTCTCTGGACCCACTCTGTCAGCATGG +
Preference number: 5 (lower is better)
Translates to: LIVQASVHIVLYGRS*TRGFSVSGPTLSAW
Trigger: CCATGCTGACAGAGTGGGTCCAGAGACAGAGAACCCCCTTGTGCAGGATCTGCCATAAAGGACAATATGAACTGATGCCTGGACTATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR CAA 90 bp TTAATGTCCCCATGGATCTGGATCCTGGAGAACTTCCAGTGTCCTGGATGGAATATCAACACGGAGAAGTaGCCGCTGTCTCCAGACTCC +
Preference number: 5 (lower is better)
Translates to: LMSPWIWILENFQCPGWNINTEK*PLSPDS
Trigger: GGAGTCTGGAGACAGCGGCAACTTCTCCGTGTTGAT...ATTCCATCCAGGACACTGGAAGTTCTCCAGGATCCAGATCCATGGGGACATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CAA 90 bp GGACTATTAATGTCCCCATGGATCTGGATCCTGGAGAACTTCCAGTGTCCTGGAGTTATTTCGCTGATGTaGGGGGCCCAACAGGACAAG +
Preference number: 5 (lower is better)
Translates to: GLLMSPWIWILENFQCPGVISLM*GAQQDK
Trigger: CTTGTCCTGTTGGGCCCCCAACATCAGCGAAATAAC...TCCAGGACACTGGAAGTTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR CAA 90 bp TGGTTCTTCACTCTCTCAGTTTCAGGCAGGAAGACTCATCCTGAGCTGAGCTGCCCTGTTCAGGTAATCTaGGGGGAAGGTGATAGGAGA +
Preference number: 5 (lower is better)
Translates to: WFFTLSVSGRKTHPELSCPVQVI*GEGDRR
Trigger: TCTCCTATCACCTTCCCCCAAGATTACCTGAACAGG...GCAGCTCAGCTCAGGATGAGTCTTCCTGCCTGAAACTGAGAGAGTGAAGAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CAA 90 bp CAGTTATGTCCCAGAGCATCGTGTGCCTGTGCAGTGGGGTTACTGATAGTCCAGACTGTCGAAATGAGGTaGCTAAGAGTCACCTTGTGG +
Preference number: 5 (lower is better)
Translates to: QLCPRASCACAVGLLIVQTVEMR*LRVTLW
Trigger: CCACAAGGTGACTCTTAGCAACCTCATTTCGACAGT...CTGGACTATCAGTAACCCCACTGCACAGGCACACGATGCTCTGGGACATAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CAA 90 bp AATGTTCTGCTTGGCTCATCTTGCCCAGAGAAGAGCCAGGATATGAGAAGATGGTACCAAAGTCCATGGTaGTCTCCCGTCGCCAGCTAT +
Preference number: 5 (lower is better)
Translates to: NVLLGSSCPEKSQDMRRWYQSPW*SPVASY
Trigger: ATAGCTGGCGACGGGAGACAACCATGGACTTTGGTA...CCATCTTCTCATATCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAGAACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS-3UTR CAA 90 bp TTAATGTCCCCATGGATCTGGATCCTGGAGAACTTCCAGTGTCCTGGATGGAATCATCTCAACCATGGGTaGTCAACCATCCTCGGTGTC +
Preference number: 5 (lower is better)
Translates to: LMSPWIWILENFQCPGWNHLNHG*STILGV
Trigger: GACACCGAGGATGGTTGACAACCCATGGTTGAGATG...ATTCCATCCAGGACACTGGAAGTTCTCCAGGATCCAGATCCATGGGGACATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CAA 90 bp TTAATGTCCCCATGGATCTGGATCCTGGAGAACTTCCAGTGTCCTGGATGGAATTGCAAGAACGTCCTGTaGGCTGGGGCAAATTCAGTA +
Preference number: 5 (lower is better)
Translates to: LMSPWIWILENFQCPGWNCKNVL*AGANSV
Trigger: TACTGAATTTGCCCCAGCCAACAGGACGTTCTTGCA...ATTCCATCCAGGACACTGGAAGTTCTCCAGGATCCAGATCCATGGGGACATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CAA 90 bp GTCCTGGATGGAATGTTCTGCTTGGCTCATCTTGCCCAGAGAAGAGCCAGGATACTGCTTTTCTTGAAGTaGTGCAAGAACGTCCTGTTG +
Preference number: 5 (lower is better)
Translates to: VLDGMFCLAHLAQRRARILLFLK*CKNVLL
Trigger: CAACAGGACGTTCTTGCACAACTTCAAGAAAAGCAG...TATCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAGAACATTCCATCCAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CAA 90 bp GTACCCAGCACATGCAGCGCCCTCAATCAATATTTGTTGTGGTGTGACTTACAAGGACTGAGGCCAGTTTaGCATGATTCAGTGACCAGG +
Preference number: 5 (lower is better)
Translates to: VPSTCSALNQYLLWCDLQGLRPV*HDSVTR
Trigger: CCTGGTCACTGAATCATGCAAAACTGGCCTCAGTCC...TTGTAAGTCACACCACAACAAATATTGATTGAGGGCGCTGCATGTGCTGGGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CAA 90 bp TTCTTGAAGTTGTGCAAGAACGTCCTGTTGGCTGGGGCAAATTCAGTATTTCTTTTGCTAAGAGTCACCTaGTGGAGGGAGAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: FLKLCKNVLLAGANSVFLLLRVT*WRESCR
Trigger: CCTGCAGCTCTCCCTCCACAAGGTGACTCTTAGCAA...AAGAAATACTGAATTTGCCCCAGCCAACAGGACGTTCTTGCACAACTTCAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CAA 90 bp CCAGTTATGTCCCAGAGCATCGTGTGCCTGTGCAGTGGGGTTACTGATAGTCCAGCCCTCAATCAATATTaGTTGTGGTGTGACTTACAA +
Preference number: 5 (lower is better)
Translates to: PVMSQSIVCLCSGVTDSPALNQY*LWCDLQ
Trigger: TTGTAAGTCACACCACAACAAATATTGATTGAGGGC...TGGACTATCAGTAACCCCACTGCACAGGCACACGATGCTCTGGGACATAACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CAA 90 bp GTACCCAGCACATGCAGCGCCCTCAATCAATATTTGTTGTGGTGTGACTTACAAGACTTTGCTCAGCACTaGGGCACCAGTAACTGTAAT +
Preference number: 5 (lower is better)
Translates to: VPSTCSALNQYLLWCDLQDFAQH*GTSNCN
Trigger: ATTACAGTTACTGGTGCCCAAGTGCTGAGCAAAGTC...TTGTAAGTCACACCACAACAAATATTGATTGAGGGCGCTGCATGTGCTGGGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CAA 90 bp TTCAACAAGGCCCTGGTGCACCACGCTACAAACCACTGTCGAAATGAGGTTGCTCTCATTAGCACAAAATaGGTCTCACAGAAGCACTTT +
Preference number: 5 (lower is better)
Translates to: FNKALVHHATNHCRNEVALISTK*VSQKHF
Trigger: AAAGTGCTTCTGTGAGACCAATTTTGTGCTAATGAG...AGCAACCTCATTTCGACAGTGGTTTGTAGCGTGGTGCACCAGGGCCTTGTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CAA 90 bp GGACTATTAATGTCCCCATGGATCTGGATCCTGGAGAACTTCCAGTGTCCTGGACTTCTGCATTTGCATTaGAAAATGAATGTGGCAGAT +
Preference number: 5 (lower is better)
Translates to: GLLMSPWIWILENFQCPGLLHLH*KMNVAD
Trigger: ATCTGCCACATTCATTTTCAAATGCAAATGCAGAAG...TCCAGGACACTGGAAGTTCTCCAGGATCCAGATCCATGGGGACATTAATAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CAA 90 bp AATGTTCTGCTTGGCTCATCTTGCCCAGAGAAGAGCCAGGATATGAGAAGATGGGAAAGGGATGAGAATTaGATAAAGCCAGGTTACCAA +
Preference number: 5 (lower is better)
Translates to: NVLLGSSCPEKSQDMRRWERDEN*IKPGYQ
Trigger: TTGGTAACCTGGCTTTATCAAATTCTCATCCCTTTC...CCATCTTCTCATATCCTGGCTCTTCTCTGGGCAAGATGAGCCAAGCAGAACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS-3UTR CAA 90 bp TTCTTGAAGTTGTGCAAGAACGTCCTGTTGGCTGGGGCAAATTCAGTATTTCTTCTCAATCAATATTTGTaGTGGTGTGACTTACAAAGC +
Preference number: 5 (lower is better)
Translates to: FLKLCKNVLLAGANSVFLLNQYL*WCDLQS
Trigger: GCTTTGTAAGTCACACCACAACAAATATTGATTGAG...AAGAAATACTGAATTTGCCCCAGCCAACAGGACGTTCTTGCACAACTTCAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS TCA 72 bp CGCTGTCTCCAGACTCCAGCGGCCCGAGCTCCAGGCTaGGGTTGCTGTGTAGCTGGGCTCGGCCCAGGAAGC +
Preference number: 6 (lower is better)
Translates to: RCLQTPAARAPG*GCCVAGLGPGS
Trigger: GCTTCCTGGGCCGAGCCCAGCTACACAGCAACCTCAGCCTGGAGCTCGGGCCGCTGGAGTCTGGAGACAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000471286.5
CDS GCA 72 bp GATAGCCTCACGGACTTGGAAGCCAGGGGGACGCGCTaGCACCAGCAGCACCGAGCCCCCGACTTTGCTCAG +
Preference number: 6 (lower is better)
Translates to: DSLTDLEARGTR*HQQHRAPDFAQ
Trigger: CTGAGCAAAGTCGGGGGCTCGGTGCTGCTGGTGGCAGCGCGTCCCCCTGGCTTCCAAGTCCGTGAGGCTATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS CCA 72 bp ACCACGGGCCTGGGCACTGCATCGTACACCTTGAGCTaGAGGGTCTGGGTCCAGGGCTGGCCCCTTGTGTCC +
Preference number: 6 (lower is better)
Translates to: TTGLGTASYTLS*RVWVQGWPLVS
Trigger: GGACACAAGGGGCCAGCCCTGGACCCAGACCCTCCAGCTCAAGGTGTACGATGCAGTGCCCAGGCCCGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000471286.5
CDS CCA 72 bp GAAGGCCAGAGAGATCGCCAGATAGCCTCACGGACTTaGAAGCCAGGGGGACGCGCTGCCACCAGCAGCACC +
Preference number: 6 (lower is better)
Translates to: EGQRDRQIASRT*KPGGRAATSST
Trigger: GGTGCTGCTGGTGGCAGCGCGTCCCCCTGGCTTCCAAGTCCGTGAGGCTATCTGGCGATCTCTCTGGCCTTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS CCA 72 bp AGCGGCCCGAGCTCCAGGCTGAGGTTGCTGTGTAGCTaGGCTCGGCCCAGGAAGCGGGAATGGTACAGAGTC +
Preference number: 6 (lower is better)
Translates to: SGPSSRLRLLCS*ARPRKREWYRV
Trigger: GACTCTGTACCATTCCCGCTTCCTGGGCCGAGCCCAGCTACACAGCAACCTCAGCCTGGAGCTCGGGCCGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000471286.5
CDS CAA 72 bp GGCTGGCCCCTTGTGTCCACCATCAACACGGAGAAGTaGCCGCTGTCTCCAGACTCCAGCGGCCCGAGCTCC +
Preference number: 6 (lower is better)
Translates to: GWPLVSTINTEK*PLSPDSSGPSS
Trigger: GGAGCTCGGGCCGCTGGAGTCTGGAGACAGCGGCAACTTCTCCGTGTTGATGGTGGACACAAGGGGCCAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000471286.5
CDS GCA 72 bp GCTGGCCCCTTGTGTCCACCATCAACACGGAGAAGTTaGCGCTGTCTCCAGACTCCAGCGGCCCGAGCTCCA +
Preference number: 6 (lower is better)
Translates to: AGPLCPPSTRRS*RCLQTPAARAP
Trigger: TGGAGCTCGGGCCGCTGGAGTCTGGAGACAGCGGCAACTTCTCCGTGTTGATGGTGGACACAAGGGGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000471286.5
CDS CAA 90 bp AAGCCAGGGGGACGCGCTGCCACCAGCAGCACCGAGCCCCCGACTTaGCTCAGCACTTGGGCACCAGTAACTGTAATGGGAAGTAGGGCT +
Preference number: 6 (lower is better)
Translates to: KPGGRAATSSTEPPT*LSTWAPVTVMGSRA
Trigger: AGCCCTACTTCCCATTACAGTTACTGGTGCCCAAGTGCTGAGCAAAGTCGGGGGCTCGGTGCTGCTGGTGGCAGCGCGTCCCCCTGGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS GCA 72 bp TGGAGGGAGAGCTGCAGGTCCCATCTCATCCAGAGCTaGTTTGATCTGAGGTGGGGCCCTGAGCAGGGGCAC +
Preference number: 6 (lower is better)
Translates to: WRESCRSHLIQS*FDLRWGPEQGH
Trigger: GTGCCCCTGCTCAGGGCCCCACCTCAGATCAAAGCAGCTCTGGATGAGATGGGACCTGCAGCTCTCCCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471286.5
CDS CCA 72 bp CTGGGCACTGCATCGTACACCTTGAGCTGGAGGGTCTaGGTCCAGGGCTGGCCCCTTGTGTCCACCATCAAC +
Preference number: 6 (lower is better)
Translates to: LGTASYTLSWRV*VQGWPLVSTIN
Trigger: GTTGATGGTGGACACAAGGGGCCAGCCCTGGACCCAGACCCTCCAGCTCAAGGTGTACGATGCAGTGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000471286.5
CDS CAA 72 bp GGACGCGCTGCCACCAGCAGCACCGAGCCCCCGACTTaGCTCAGCACTTGGGCACCAGTAACTGTAATGGGA +
Preference number: 6 (lower is better)
Translates to: GRAATSSTEPPT*LSTWAPVTVMG
Trigger: TCCCATTACAGTTACTGGTGCCCAAGTGCTGAGCAAAGTCGGGGGCTCGGTGCTGCTGGTGGCAGCGCGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS GCA 72 bp TGGAGGGAGAGCTGCAGGTCCCATCTCATCCAGAGCTaGTTTGATCTGAGGTGGGGCCCAACAGGGAACCTC +
Preference number: 6 (lower is better)
Translates to: WRESCRSHLIQS*FDLRWGPTGNL
Trigger: GAGGTTCCCTGTTGGGCCCCACCTCAGATCAAAGCAGCTCTGGATGAGATGGGACCTGCAGCTCTCCCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497141.1
CDS CCA 72 bp TTGCTGTGTAGCTGGGCTCGGCCCAGGAAGCGGGAATaGTACAGAGTCTCCAGGGAGCCTCGGAAAAACGTG +
Preference number: 6 (lower is better)
Translates to: LLCSWARPRKRE*YRVSREPRKNV
Trigger: CACGTTTTTCCGAGGCTCCCTGGAGACTCTGTACCATTCCCGCTTCCTGGGCCGAGCCCAGCTACACAGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000471286.5
CDS CAA 90 bp GCAGGTCTTGGAGGGCTGAGCATCCCTTTCTACAGCAATGAACACTaGTACCACGGGCCTGGGCACTGCATCGTACACCTTGAGCTGGAG +
Preference number: 6 (lower is better)
Translates to: AGLGGLSIPFYSNEH*YHGPGHCIVHLELE
Trigger: CTCCAGCTCAAGGTGTACGATGCAGTGCCCAGGCCCGTGGTACAAGTGTTCATTGCTGTAGAAAGGGATGCTCAGCCCTCCAAGACCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000471286.5
CDS CCA 72 bp AATGGTACAGAGTCTCCAGGGAGCCTCGGAAAAACGTaGCCAGGAGCTCTTCTGAAGGCCAGAGAGATCGCC +
Preference number: 6 (lower is better)
Translates to: NGTESPGSLGKT*PGALLKAREIA
Trigger: GGCGATCTCTCTGGCCTTCAGAAGAGCTCCTGGCCACGTTTTTCCGAGGCTCCCTGGAGACTCTGTACCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289707.10
CDS TCA 72 bp AGGTCTTGGAGGGCTGAGCATCCCTTTCTACAGCAATaGACACTTGTACCACGGGCCTGGGCACTGCATCGT +
Preference number: 6 (lower is better)
Translates to: RSWRAEHPFLQQ*TLVPRAWALHR
Trigger: ACGATGCAGTGCCCAGGCCCGTGGTACAAGTGTTCATTGCTGTAGAAAGGGATGCTCAGCCCTCCAAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000471286.5
CDS TCA 72 bp CATCTTCCCAGAGAAGCAGACTCCACAGGGGCCTCATaGCCATCTTTCTCTGGAGAGGCAGGCAAACTCCCT +
Preference number: 6 (lower is better)
Translates to: HLPREADSTGAS*PSFSGEAGKLP
Trigger: AGGGAGTTTGCCTGCCTCTCCAGAGAAAGATGGTCATGAGGCCCCTGTGGAGTCTGCTTCTCTGGGAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368104.4
CDS CCA 72 bp AGCAGACTCCACAGGGGCCTCATGACCATCTTTCTCTaGAGAGGCAGGCAAACTCCCTCGACAGCCAAAATC +
Preference number: 6 (lower is better)
Translates to: SRLHRGLMTIFL*RGRQTPSTAKI
Trigger: GATTTTGGCTGTCGAGGGAGTTTGCCTGCCTCTCCAGAGAAAGATGGTCATGAGGCCCCTGTGGAGTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368104.4
CDS TCA 72 bp TGGTTGTCTCCCGTCGCCAGCTATAGGTTATTTCGCTaGTGTTGGGGGCCCAACAGGACAAGAAAACCTGGC +
Preference number: 6 (lower is better)
Translates to: WLSPVASYRLFR*CWGPNRTRKPG
Trigger: GCCAGGTTTTCTTGTCCTGTTGGGCCCCCAACATCAGCGAAATAACCTATAGCTGGCGACGGGAGACAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289707.10
ENST00000368104.4
ENST00000471286.5
CDS TCA 72 bp AGGTCTTGGAGGGCTGAGCATCCCTTTCTACAGCAATaGACACTTGTACCACGGGCCTGGGCACTGCATCTT +
Preference number: 6 (lower is better)
Translates to: RSWRAEHPFLQQ*TLVPRAWALHL
Trigger: AAGATGCAGTGCCCAGGCCCGTGGTACAAGTGTTCATTGCTGTAGAAAGGGATGCTCAGCCCTCCAAGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368104.4
CDS CCA 72 bp AATGCTCAGCACCTGTCCGTCTGTGAAGAGGCTGTGTaGTTCCATACCAAAGTCCATGGTTGTCTCCCGTCG +
Preference number: 6 (lower is better)
Translates to: NAQHLSVCEEAV*FHTKVHGCLPS
Trigger: CGACGGGAGACAACCATGGACTTTGGTATGGAACCACACAGCCTCTTCACAGACGGACAGGTGCTGAGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289707.10
ENST00000368104.4
ENST00000471286.5
CDS GCA 72 bp CAGGCATCAGTTCATATTGTCCTTTATGGCAGATCCTaGACAAGGGGGTTCTCTGTCTCTGGACCCACTCTG +
Preference number: 6 (lower is better)
Translates to: QASVHIVLYGRS*TRGFSVSGPTL
Trigger: CAGAGTGGGTCCAGAGACAGAGAACCCCCTTGTGCAGGATCTGCCATAAAGGACAATATGAACTGATGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4
CDS CCA 72 bp TTATGGCAGATCCTGCACAAGGGGGTTCTCTGTCTCTaGACCCACTCTGTCAGCATGGACATCCTTTTTCTT +
Preference number: 6 (lower is better)
Translates to: LWQILHKGVLCL*THSVSMDILFL
Trigger: AAGAAAAAGGATGTCCATGCTGACAGAGTGGGTCCAGAGACAGAGAACCCCCTTGTGCAGGATCTGCCATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000289707.10
ENST00000368104.4