RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLAIN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000109171

Ensembl transcript IDs: ENST00000264313.11, ENST00000505131.1, ENST00000506375.1, ENST00000510595.1, ENST00000512093.5

Found 300 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACAGCATGTGAAGAAGTTGGCTTCAATAGCAAAGGCCATCTTTCCTaGGCCAGGAACTATAAAGTTCAGAAAGATTGTACAACTGATATT +
Preference number: 1 (lower is better)
Translates to: TACEEVGFNSKGHLS*ARNYKVQKDCTTDI
Trigger: AATATCAGTTGTACAATCTTTCTGAACTTTATAGTTCCTGGCTCAGGAAAGATGGCCTTTGCTATTGAAGCCAACTTCTTCACATGCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR TCA 90 bp CAATGCAACATGATGGATACATGCTGTAACACTATCTGGTGGTGGTaGCATGTGAGCTACATCCAAAACTTAAGATTAAATGACAATTTT +
Preference number: 1 (lower is better)
Translates to: QCNMMDTCCNTIWWW*HVSYIQNLRLNDNF
Trigger: AAAATTGTCATTTAATCTTAAGTTTTGGATGTAGCTCACATGTCACCACCACCAGATAGTGTTACAGCATGTATCCATCATGTTGCATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR TCA 90 bp ACTTGTGTATTAGATGTTCGGGACAGGTTTGGAAGACTGCGTCTTAGTTTTTCTTCTGTGGGATGGCCTTaGAGTGAAAGGCGAGGTTGC +
Preference number: 2 (lower is better)
Translates to: TCVLDVRDRFGRLRLSFSSVGWP*SERRGC
Trigger: GCAACCTCGCCTTTCACTTCAAGGCCATCCCACAGA...AGAAAAACTAAGACGCAGTCTTCCAAACCTGTCCCGAACATCTAATACACAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505131.1
3UTR-3UTR GCA 90 bp GTAATTCACTGGCTGAAGCCTGAGGTTGCATACGAGGTATTCCTCCGTTTGGCATTGAGTCACTTCTGCTaGTTTTCACTGAGTCAACTT +
Preference number: 2 (lower is better)
Translates to: VIHWLKPEVAYEVFLRLALSHFC*FSLSQL
Trigger: AAGTTGACTCAGTGAAAAGCAGCAGAAGTGACTCAA...TGCCAAACGGAGGAATACCTCGTATGCAACCTCAGGCTTCAGCCAGTGAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505131.1
3UTR-3UTR TCA 90 bp CAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCCACTATCTGGTGGTGGTaGCATGTGAGCTACATCCAA +
Preference number: 2 (lower is better)
Translates to: QPINLNAVQNIKPSISLSTIWWW*HVSYIQ
Trigger: TTGGATGTAGCTCACATGTCACCACCACCAGATAGT...GGAGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR CCA 90 bp CAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCCTCCCCCTCTCTCTCATaGTATGGTTTTGTTCCAGGT +
Preference number: 2 (lower is better)
Translates to: QPINLNAVQNIKPSISLSSPSLS*YGFVPG
Trigger: ACCTGGAACAAAACCATACCATGAGAGAGAGGGGGA...GGAGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR TCA 90 bp ATTAAGGAGGCAACCACATATACAAGTTCGGCTATAGAAATGTTTGCAAATCAAGGTGAAGGGTATCCATaGAGCCGTGGACTTCTGCAT +
Preference number: 2 (lower is better)
Translates to: IKEATTYTSSAIEMFANQGEGYP*SRGLLH
Trigger: ATGCAGAAGTCCACGGCTTCATGGATACCCTTCACC...TTGATTTGCAAACATTTCTATAGCCGAACTTGTATATGTGGTTGCCTCCTTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR TCA 90 bp TGTATCAAGAATAAAGACACACACTACTTGTTCTTTCCTATCATGAAAACCTGCGGTGAAGGGTATCCATaGAGCCGTGGACTTCTGCAT +
Preference number: 2 (lower is better)
Translates to: CIKNKDTHYLFFPIMKTCGEGYP*SRGLLH
Trigger: ATGCAGAAGTCCACGGCTTCATGGATACCCTTCACC...GCAGGTTTTCATGATAGGAAAGAACAAGTAGTGTGTGTCTTTATTCTTGATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR GCA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAAGGTTTTGTTCCAGGTTaGAAGCACCGAGGTGGTGTT +
Preference number: 2 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKGFVPG*KHRGGV
Trigger: AACACCACCTCGGTGCTTGCAACCTGGAACAAAACC...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR TCA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAAACTATCTGGTGGTGGTaGCATGTGAGCTACATCCAA +
Preference number: 2 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKTIWWW*HVSYIQ
Trigger: TTGGATGTAGCTCACATGTCACCACCACCAGATAGT...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR CCA 90 bp CTTTTCACTGAGTCAACTTGTGTATTAGATGTTCGGGACAGGTTTGGAAGACTGTTGTCTGTAAATCTGTaGGATGGCCTTGAAGTGAAA +
Preference number: 2 (lower is better)
Translates to: LFTESTCVLDVRDRFGRLLSVNL*DGLEVK
Trigger: TTTCACTTCAAGGCCATCCCACAGATTTACAGACAA...CAGTCTTCCAAACCTGTCCCGAACATCTAATACACAAGTTGACTCAGTGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505131.1
3UTR CAA 90 bp GTGCACAAATGGGCATTTTTCTCATTTACAAATGGGCATTTCTCTTaGGCATCCATTAGGTATTTGCCCAGATATTGGCCTCTGTCAAAT +
Preference number: 2 (lower is better)
Translates to: VHKWAFFSFTNGHFS*ASIRYLPRYWPLSN
Trigger: ATTTGACAGAGGCCAATATCTGGGCAAATACCTAATGGATGCCAAAGAGAAATGCCCATTTGTAAATGAGAAAAATGCCCATTTGTGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR TCA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAACTTGTGCTAAATGAATaGCTCTCCACTGGTCAAGCT +
Preference number: 2 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKLVLNE*LSTGQA
Trigger: AGCTTGACCAGTGGAGAGTCATTCATTTAGCACAAG...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR TCA 90 bp GATTTTTCCATCCATACAAGAAAAGATGCACGTGATCACCTAAATATTCGCATTGCTGCTTGTGCTAAATaGATGACTCTCCACTGGTCA +
Preference number: 2 (lower is better)
Translates to: DFSIHTRKDARDHLNIRIAACAK*MTLHWS
Trigger: TGACCAGTGGAGAGTCATTCATTTAGCACAAGCAGC...AATGCGAATATTTAGGTGATCACGTGCATCTTTTCTTGTATGGATGGAAAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264313.11
3UTR-3UTR TCA 90 bp ATTAAGGAGGCAACCACATATACAAGTTCGGCTATAGAAATGTTTGCAAATCAAGCTGCTTGTGCTAAATaGATGACTCTCCACTGGTCA +
Preference number: 2 (lower is better)
Translates to: IKEATTYTSSAIEMFANQAACAK*MTLHWS
Trigger: TGACCAGTGGAGAGTCATTCATTTAGCACAAGCAGC...TTGATTTGCAAACATTTCTATAGCCGAACTTGTATATGTGGTTGCCTCCTTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR CCA 90 bp CAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCCTTGCAAGCACCGAGGTaGTGTTGTATCAAGAATAAA +
Preference number: 2 (lower is better)
Translates to: QPINLNAVQNIKPSISLSLQAPR*CCIKNK
Trigger: TTTATTCTTGATACAACACCACCTCGGTGCTTGCAA...GGAGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR CCA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGTCCCCCTCTCTCTCATaGTATGGTTTTGTTCCAGGT +
Preference number: 2 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLSPSLS*YGFVPG
Trigger: ACCTGGAACAAAACCATACCATGAGAGAGAGGGGGA...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR CCA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGGTATCCATGAAGCCGTaGACTTCTGCATTCTTGTCT +
Preference number: 2 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLVSMKP*TSAFLS
Trigger: AGACAAGAATGCAGAAGTCCACGGCTTCATGGATAC...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR CCA 90 bp ATTAAGGAGGCAACCACATATACAAGTTCGGCTATAGAAATGTTTGCAAATCAAGTATCCATGAAGCCGTaGACTTCTGCATTCTTGTCT +
Preference number: 2 (lower is better)
Translates to: IKEATTYTSSAIEMFANQVSMKP*TSAFLS
Trigger: AGACAAGAATGCAGAAGTCCACGGCTTCATGGATAC...TTGATTTGCAAACATTTCTATAGCCGAACTTGTATATGTGGTTGCCTCCTTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR CCA 90 bp ATCAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCTCTCTCTCATGGTATaGTTTTGTTCCAGGTTGCAA +
Preference number: 2 (lower is better)
Translates to: INLSTLMLSRISSLLFLSLSLMV*FCSRLQ
Trigger: TTGCAACCTGGAACAAAACCATACCATGAGAGAGAG...AGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR CCA 90 bp ATTAAGGAGGCAACCACATATACAAGTTCGGCTATAGAAATGTTTGCAAATCAATATCATGTAGAATTCTaGCGCCATCCTTTCCTGACC +
Preference number: 2 (lower is better)
Translates to: IKEATTYTSSAIEMFANQYHVEF*RHPFLT
Trigger: GGTCAGGAAAGGATGGCGCCAGAATTCTACATGATA...TTGATTTGCAAACATTTCTATAGCCGAACTTGTATATGTGGTTGCCTCCTTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR TCA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAATGTGTCAATGCAACATaGTGGATACATGCTGTAACA +
Preference number: 2 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKCVNAT*WIHAVT
Trigger: TGTTACAGCATGTATCCATCATGTTGCATTGACACA...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR TCA 90 bp ATTAAGGAGGCAACCACATATACAAGTTCGGCTATAGAAATGTTTGCAAATCAAAAAGGCCATCTTTCCTaGGCCAGGAACTATAAAGTT +
Preference number: 2 (lower is better)
Translates to: IKEATTYTSSAIEMFANQKGHLS*ARNYKV
Trigger: AACTTTATAGTTCCTGGCTCAGGAAAGATGGCCTTT...TTGATTTGCAAACATTTCTATAGCCGAACTTGTATATGTGGTTGCCTCCTTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR TCA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGAAAGGCCATCTTTCCTaGGCCAGGAACTATAAAGTT +
Preference number: 2 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLKGHLS*ARNYKV
Trigger: AACTTTATAGTTCCTGGCTCAGGAAAGATGGCCTTT...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR TCA 90 bp CATGTCATAACCATGTTACGGACAGTACTTCAATATTTCCGGATTATGGGATTGTGTTGCACTGAAAACTaGGACTTGTTCTGTTTTGTA +
Preference number: 2 (lower is better)
Translates to: HVITMLRTVLQYFRIMGLCCTEN*DLFCFV
Trigger: TACAAAACAGAACAAGTCTCAGTTTTCAGTGCAACA...CAATCCCATAATCCGGAAATATTGAAGTACTGTCCGTAACATGGTTATGACATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264313.11
3UTR-3UTR TCA 90 bp GATTTTTCCATCCATACAAGAAAAGATGCACGTGATCACCTAAATATTCGCATTCATAATCCAACCCCATaGAGACTAAATCTGAAAGGG +
Preference number: 2 (lower is better)
Translates to: DFSIHTRKDARDHLNIRIHNPTP*RLNLKG
Trigger: CCCTTTCAGATTTAGTCTTCATGGGGTTGGATTATG...AATGCGAATATTTAGGTGATCACGTGCATCTTTTCTTGTATGGATGGAAAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264313.11
3UTR-3UTR TCA 90 bp CATGTCATAACCATGTTACGGACAGTACTTCAATATTTCCGGATTATGGGATTGAAGAAAAGATGCACGTaGTCACCTAAATATTCGCAT +
Preference number: 2 (lower is better)
Translates to: HVITMLRTVLQYFRIMGLKKRCT*SPKYSH
Trigger: ATGCGAATATTTAGGTGATCACGTGCATCTTTTCTT...CAATCCCATAATCCGGAAATATTGAAGTACTGTCCGTAACATGGTTATGACATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264313.11
3UTR-3UTR GCA 90 bp CATGTCATAACCATGTTACGGACAGTACTTCAATATTTCCGGATTATGGGATTGAGTTTGATGTGTCAATaGAACATGATGGATACATGC +
Preference number: 2 (lower is better)
Translates to: HVITMLRTVLQYFRIMGLSLMCQ*NMMDTC
Trigger: GCATGTATCCATCATGTTGCATTGACACATCAAACT...CAATCCCATAATCCGGAAATATTGAAGTACTGTCCGTAACATGGTTATGACATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264313.11
3UTR-3UTR CCA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAAATGGGCATTTCTCTTTaGCATCCATTAGGTATTTGC +
Preference number: 2 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKMGISL*HPLGIC
Trigger: GCAAATACCTAATGGATGCCAAAGAGAAATGCCCAT...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR CCA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGCTCTCTCTCATGGTATaGTTTTGTTCCAGGTTGCAA +
Preference number: 2 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLLSLMV*FCSRLQ
Trigger: TTGCAACCTGGAACAAAACCATACCATGAGAGAGAG...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR CAA 90 bp ACTGATATTAAGCCCTTTTGGCAATCAAAACAAACACACACAAGTTaGATGTGTCAATGCAACATGATGGATACATGCTGTAACACTATC +
Preference number: 2 (lower is better)
Translates to: TDIKPFWQSKQTHTS*MCQCNMMDTCCNTI
Trigger: GATAGTGTTACAGCATGTATCCATCATGTTGCATTGACACATCAAACTTGTGTGTGTTTGTTTTGATTGCCAAAAGGGCTTAATATCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR TCA 90 bp ATCAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTAAGTTTTGGATAGCCTaGATTCACCATTTTCTTGTG +
Preference number: 2 (lower is better)
Translates to: INLSTLMLSRISSLLFLSKFWIA*IHHFLV
Trigger: CACAAGAAAATGGTGAATTCAGGCTATCCAAAACTT...AGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR TCA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGTGTGTCAATGCAACATaGTGGATACATGCTGTAACA +
Preference number: 2 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLCVNAT*WIHAVT
Trigger: TGTTACAGCATGTATCCATCATGTTGCATTGACACA...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR GCA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGAACATGATGGATACATaGTGTAACACTATCTGGTGG +
Preference number: 2 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLNMMDT*CNTIWW
Trigger: CCACCAGATAGTGTTACAGCATGTATCCATCATGTT...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR GCA 90 bp TGTATCAAGAATAAAGACACACACTACTTGTTCTTTCCTATCATGAAAACCTGCAACATGATGGATACATaGTGTAACACTATCTGGTGG +
Preference number: 2 (lower is better)
Translates to: CIKNKDTHYLFFPIMKTCNMMDT*CNTIWW
Trigger: CCACCAGATAGTGTTACAGCATGTATCCATCATGTT...GCAGGTTTTCATGATAGGAAAGAACAAGTAGTGTGTGTCTTTATTCTTGATACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR GCA 90 bp ATCAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTAGTTTGATGTGTCAATaGAACATGATGGATACATGC +
Preference number: 2 (lower is better)
Translates to: INLSTLMLSRISSLLFLSSLMCQ*NMMDTC
Trigger: GCATGTATCCATCATGTTGCATTGACACATCAAACT...AGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR CCA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGATGGGCATTTCTCTTTaGCATCCATTAGGTATTTGC +
Preference number: 2 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLMGISL*HPLGIC
Trigger: GCAAATACCTAATGGATGCCAAAGAGAAATGCCCAT...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR CCA 90 bp ATTAAGGAGGCAACCACATATACAAGTTCGGCTATAGAAATGTTTGCAAATCAATTGCAAGCACCGAGGTaGTGTTGTATCAAGAATAAA +
Preference number: 2 (lower is better)
Translates to: IKEATTYTSSAIEMFANQLQAPR*CCIKNK
Trigger: TTTATTCTTGATACAACACCACCTCGGTGCTTGCAA...TTGATTTGCAAACATTTCTATAGCCGAACTTGTATATGTGGTTGCCTCCTTAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR TCA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGTGGAGAGTGATTGTATaGTTACCAAACACATCTGAT +
Preference number: 2 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLWRVIV*LPNTSD
Trigger: ATCAGATGTGTTTGGTAATCATACAATCACTCTCCA...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR TCA 90 bp ATTAAGGAGGCAACCACATATACAAGTTCGGCTATAGAAATGTTTGCAAATCAATGGAGAGTGATTGTATaGTTACCAAACACATCTGAT +
Preference number: 2 (lower is better)
Translates to: IKEATTYTSSAIEMFANQWRVIV*LPNTSD
Trigger: ATCAGATGTGTTTGGTAATCATACAATCACTCTCCA...TTGATTTGCAAACATTTCTATAGCCGAACTTGTATATGTGGTTGCCTCCTTAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR GCA 90 bp ATTAAGGAGGCAACCACATATACAAGTTCGGCTATAGAAATGTTTGCAAATCAATCTCCCAATTTCTTTTaGCAACTTACGGAATGTCTT +
Preference number: 2 (lower is better)
Translates to: IKEATTYTSSAIEMFANQSPNFF*QLTECL
Trigger: AAGACATTCCGTAAGTTGGCAAAAGAAATTGGGAGA...TTGATTTGCAAACATTTCTATAGCCGAACTTGTATATGTGGTTGCCTCCTTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR CCA 90 bp ATTAAGGAGGCAACCACATATACAAGTTCGGCTATAGAAATGTTTGCAAATCAACAATCTGTAGTTTCCTaGTGTACTAGTGAAACACTT +
Preference number: 2 (lower is better)
Translates to: IKEATTYTSSAIEMFANQQSVVS*CTSETL
Trigger: AAGTGTTTCACTAGTACACCAGGAAACTACAGATTG...TTGATTTGCAAACATTTCTATAGCCGAACTTGTATATGTGGTTGCCTCCTTAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR TCA 72 bp GGCAGTTTAAATCTCCAGCTGCTTGTGCTAAATGAATaGCTCTCCACTGGTCAAGCTGACAGACTACCATGG +
Preference number: 3 (lower is better)
Translates to: GSLNLQLLVLNE*LSTGQADRLPW
Trigger: CCATGGTAGTCTGTCAGCTTGACCAGTGGAGAGTCATTCATTTAGCACAAGCAGCTGGAGATTTAAACTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR CAA 90 bp CAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCCTGGTTTTGTTCCAGGTaGCAAGCACCGAGGTGGTGT +
Preference number: 3 (lower is better)
Translates to: QPINLNAVQNIKPSISLSWFCSR*QAPRWC
Trigger: ACACCACCTCGGTGCTTGCAACCTGGAACAAAACCA...GGAGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR CAA 90 bp CATGTCATAACCATGTTACGGACAGTACTTCAATATTTCCGGATTATGGGATTGTGGTTTTGTTCCAGGTaGCAAGCACCGAGGTGGTGT +
Preference number: 3 (lower is better)
Translates to: HVITMLRTVLQYFRIMGLWFCSR*QAPRWC
Trigger: ACACCACCTCGGTGCTTGCAACCTGGAACAAAACCA...CAATCCCATAATCCGGAAATATTGAAGTACTGTCCGTAACATGGTTATGACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264313.11
3UTR-3UTR CAA 90 bp CAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCCTCTCATGGTATGGTTTaGTTCCAGGTTGCAAGCACC +
Preference number: 3 (lower is better)
Translates to: QPINLNAVQNIKPSISLSSHGMV*FQVAST
Trigger: GGTGCTTGCAACCTGGAACAAAACCATACCATGAGA...GGAGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR CAA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAATCTCATGGTATGGTTTaGTTCCAGGTTGCAAGCACC +
Preference number: 3 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKSHGMV*FQVAST
Trigger: GGTGCTTGCAACCTGGAACAAAACCATACCATGAGA...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR CAA 90 bp CAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCCTCATTAAAGTGCTGTTaGATGATCTCTGTCGGTTTG +
Preference number: 3 (lower is better)
Translates to: QPINLNAVQNIKPSISLSSLKCC*MISVGL
Trigger: CAAACCGACAGAGATCATCAAACAGCACTTTAATGA...GGAGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR CAA 90 bp TGTATCAAGAATAAAGACACACACTACTTGTTCTTTCCTATCATGAAAACCTGCGCATCCATTAGGTATTaGCCCAGATATTGGCCTCTG +
Preference number: 3 (lower is better)
Translates to: CIKNKDTHYLFFPIMKTCASIRY*PRYWPL
Trigger: CAGAGGCCAATATCTGGGCAAATACCTAATGGATGC...GCAGGTTTTCATGATAGGAAAGAACAAGTAGTGTGTGTCTTTATTCTTGATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR CAA 90 bp CAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCCCAAACACACACAAGTTaGATGTGTCAATGCAACATG +
Preference number: 3 (lower is better)
Translates to: QPINLNAVQNIKPSISLSQTHTS*MCQCNM
Trigger: CATGTTGCATTGACACATCAAACTTGTGTGTGTTTG...GGAGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR CAA 90 bp TGTATCAAGAATAAAGACACACACTACTTGTTCTTTCCTATCATGAAAACCTGCCAGCATGTGAAGAAGTaGGCTTCAATAGCAAAGGCC +
Preference number: 3 (lower is better)
Translates to: CIKNKDTHYLFFPIMKTCQHVKK*ASIAKA
Trigger: GGCCTTTGCTATTGAAGCCAACTTCTTCACATGCTG...GCAGGTTTTCATGATAGGAAAGAACAAGTAGTGTGTGTCTTTATTCTTGATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR CAA 90 bp CATGTCATAACCATGTTACGGACAGTACTTCAATATTTCCGGATTATGGGATTGCTCTCCCAATTTCTTTaGCCAACTTACGGAATGTCT +
Preference number: 3 (lower is better)
Translates to: HVITMLRTVLQYFRIMGLLSQFL*PTYGMS
Trigger: AGACATTCCGTAAGTTGGCAAAAGAAATTGGGAGAG...CAATCCCATAATCCGGAAATATTGAAGTACTGTCCGTAACATGGTTATGACATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264313.11
3UTR TCA 72 bp GAAGAAGTTGGCTTCAATAGCAAAGGCCATCTTTCCTaGGCCAGGAACTATAAAGTTCAGAAAGATTGTACA +
Preference number: 3 (lower is better)
Translates to: EEVGFNSKGHLS*ARNYKVQKDCT
Trigger: TGTACAATCTTTCTGAACTTTATAGTTCCTGGCTCAGGAAAGATGGCCTTTGCTATTGAAGCCAACTTCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR CAA 90 bp CAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCCGTATTTGCCCAGATATaGGCCTCTGTCAAATATTTT +
Preference number: 3 (lower is better)
Translates to: QPINLNAVQNIKPSISLSVFAQI*ASVKYF
Trigger: AAAATATTTGACAGAGGCCAATATCTGGGCAAATAC...GGAGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR CAA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAACTCTCCCAATTTCTTTaGCCAACTTACGGAATGTCT +
Preference number: 3 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKLSQFL*PTYGMS
Trigger: AGACATTCCGTAAGTTGGCAAAAGAAATTGGGAGAG...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR CAA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAATCATTAAAGTGCTGTTaGATGATCTCTGTCGGTTTG +
Preference number: 3 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKSLKCC*MISVGL
Trigger: CAAACCGACAGAGATCATCAAACAGCACTTTAATGA...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR CAA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAACAAACACACACAAGTTaGATGTGTCAATGCAACATG +
Preference number: 3 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKQTHTS*MCQCNM
Trigger: CATGTTGCATTGACACATCAAACTTGTGTGTGTTTG...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR TCA 72 bp ATGATGGATACATGCTGTAACACTATCTGGTGGTGGTaGCATGTGAGCTACATCCAAAACTTAAGATTAAAT +
Preference number: 3 (lower is better)
Translates to: MMDTCCNTIWWW*HVSYIQNLRLN
Trigger: ATTTAATCTTAAGTTTTGGATGTAGCTCACATGTCACCACCACCAGATAGTGTTACAGCATGTATCCATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR GCA 72 bp CAATCAAAACAAACACACACAAGTTTGATGTGTCAATaGAACATGATGGATACATGCTGTAACACTATCTGG +
Preference number: 3 (lower is better)
Translates to: QSKQTHTSLMCQ*NMMDTCCNTIW
Trigger: CCAGATAGTGTTACAGCATGTATCCATCATGTTGCATTGACACATCAAACTTGTGTGTGTTTGTTTTGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR GCA 72 bp TTTGCAAATCAAACGTCATGTGACCTTAAAGGACCATaGTTAACGTCAAAAATGGACACCTGTACATTCAAT +
Preference number: 3 (lower is better)
Translates to: FANQTSCDLKGP*LTSKMDTCTFN
Trigger: ATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTCACATGACGTTTGATTTGCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR CAA 90 bp ATCAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTGTATTTGCCCAGATATaGGCCTCTGTCAAATATTTT +
Preference number: 3 (lower is better)
Translates to: INLSTLMLSRISSLLFLSVFAQI*ASVKYF
Trigger: AAAATATTTGACAGAGGCCAATATCTGGGCAAATAC...AGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR CAA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGAATGGGCATTTCTCTTaGGCATCCATTAGGTATTTG +
Preference number: 3 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLNGHFS*ASIRYL
Trigger: CAAATACCTAATGGATGCCAAAGAGAAATGCCCATT...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR CAA 90 bp ATTAAGGAGGCAACCACATATACAAGTTCGGCTATAGAAATGTTTGCAAATCAAAATGGGCATTTCTCTTaGGCATCCATTAGGTATTTG +
Preference number: 3 (lower is better)
Translates to: IKEATTYTSSAIEMFANQNGHFS*ASIRYL
Trigger: CAAATACCTAATGGATGCCAAAGAGAAATGCCCATT...TTGATTTGCAAACATTTCTATAGCCGAACTTGTATATGTGGTTGCCTCCTTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
3UTR-3UTR CAA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGGAATTCACCATTTTCTaGTGCACAAATGGGCATTTT +
Preference number: 3 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLEFTIF*CTNGHF
Trigger: AAAATGCCCATTTGTGCACAAGAAAATGGTGAATTC...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR TCA 90 bp GTAATTCACTGGCTGAAGCCTGAGGTTGCATACGAGGTATTCCTCCGTTTGGCATCTGTGGGATGGCCTTaGAGTGAAAGGCGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: VIHWLKPEVAYEVFLRLASVGWP*SERRGC
Trigger: GCAACCTCGCCTTTCACTTCAAGGCCATCCCACAGA...TGCCAAACGGAGGAATACCTCGTATGCAACCTCAGGCTTCAGCCAGTGAATTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505131.1
CDS-3UTR GCA 90 bp AGGCGAGGTTGCTGTAAGCGGCTAATCATAGGCTGTGGGGACACTCTACTATATCCGAGACGTGGTGGCTaGATATTCTTGCCGGAGACT +
Preference number: 4 (lower is better)
Translates to: RRGCCKRLIIGCGDTLLYPRRGG*IFLPET
Trigger: AGTCTCCGGCAAGAATATGCAGCCACCACGTCTCGG...ATATAGTAGAGTGTCCCCACAGCCTATGATTAGCCGCTTACAGCAACCTCGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505131.1
CDS-3UTR GCA 90 bp GTAATTCACTGGCTGAAGCCTGAGGTTGCATACGAGGTATTCCTCCGTTTGGCAAAGATGAACCAGAACTaGGCCGAGACGTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: VIHWLKPEVAYEVFLRLAKMNQN*AETWWL
Trigger: CAGCCACCACGTCTCGGCGCAGTTCTGGTTCATCTT...TGCCAAACGGAGGAATACCTCGTATGCAACCTCAGGCTTCAGCCAGTGAATTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505131.1
CDS-3UTR CCA 90 bp GTAATTCACTGGCTGAAGCCTGAGGTTGCATACGAGGTATTCCTCCGTTTGGCAAACTGCGCCGAGACGTaGTGGCTGCATATTCTTGCC +
Preference number: 4 (lower is better)
Translates to: VIHWLKPEVAYEVFLRLANCAET*WLHILA
Trigger: GGCAAGAATATGCAGCCACCACGTCTCGGCGCAGTT...TGCCAAACGGAGGAATACCTCGTATGCAACCTCAGGCTTCAGCCAGTGAATTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505131.1
CDS-3UTR CCA 90 bp GATTTTTCCATCCATACAAGAAAAGATGCACGTGATCACCTAAATATTCGCATTCGCCGGAGGAGGGAATaGACGCGCCGGCCCGAACCG +
Preference number: 4 (lower is better)
Translates to: DFSIHTRKDARDHLNIRIRRRRE*TRRPEP
Trigger: CGGTTCGGGCCGGCGCGTCCATTCCCTCCTCCGGCG...AATGCGAATATTTAGGTGATCACGTGCATCTTTTCTTGTATGGATGGAAAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR GCA 90 bp AGGCGAGGTTGCTGTAAGCGGCTAATCATAGGCTGTGGGGACACTCTACTATATGTGGCTGCATATTCTTaGCGGAGACTTTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: RRGCCKRLIIGCGDTLLYVAAYS*RRLSSC
Trigger: GCAGGAAGAAAGTCTCCGGCAAGAATATGCAGCCAC...ATATAGTAGAGTGTCCCCACAGCCTATGATTAGCCGCTTACAGCAACCTCGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505131.1
CDS-3UTR GCA 90 bp AGGCGAGGTTGCTGTAAGCGGCTAATCATAGGCTGTGGGGACACTCTACTATATGAATTTCTGGGTGACTaGTTAGGTGACGGTCGAGGT +
Preference number: 4 (lower is better)
Translates to: RRGCCKRLIIGCGDTLLYEFLGD*LGDGRG
Trigger: ACCTCGACCGTCACCTAAGCAGTCACCCAGAAATTC...ATATAGTAGAGTGTCCCCACAGCCTATGATTAGCCGCTTACAGCAACCTCGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505131.1
CDS-3UTR GCA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGTGGCCCCAGCCGAACTaGCTCATCTGCGCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLWPQPN*LICAGS
Trigger: GGAGCCGGCGCAGATGAGGCAGTTCGGCTGGGGCCA...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR CCA 90 bp ATCAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTGTTCCAAAGCGCCGCTaGCCCCAGCCGAACTGCCTC +
Preference number: 4 (lower is better)
Translates to: INLSTLMLSRISSLLFLSVPKRR*PQPNCL
Trigger: GAGGCAGTTCGGCTGGGGCCAGCGGCGCTTTGGAAC...AGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR TCA 90 bp CAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCCGCTGAGACTGTGCTCTaGACCATAGGAGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: QPINLNAVQNIKPSISLSAETVL*TIGGPG
Trigger: ACCTGGGCCTCCTATGGTTCAGAGCACAGTCTCAGC...GGAGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CCA 90 bp TGTATCAAGAATAAAGACACACACTACTTGTTCTTTCCTATCATGAAAACCTGCCCGCTAGCAAGGAGGTaGCGTCCCGCAGCTCTTCGC +
Preference number: 4 (lower is better)
Translates to: CIKNKDTHYLFFPIMKTCPLARR*RPAALR
Trigger: GCGAAGAGCTGCGGGACGCCACCTCCTTGCTAGCGG...GCAGGTTTTCATGATAGGAAAGAACAAGTAGTGTGTGTCTTTATTCTTGATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR CCA 90 bp ACTTGTGTATTAGATGTTCGGGACAGGTTTGGAAGACTGCGTCTTAGTTTTTCTTGCGCCGAGACGTGGTaGCTGCATATTCTTGCCGGA +
Preference number: 4 (lower is better)
Translates to: TCVLDVRDRFGRLRLSFSCAETW*LHILAG
Trigger: TCCGGCAAGAATATGCAGCCACCACGTCTCGGCGCA...AGAAAAACTAAGACGCAGTCTTCCAAACCTGTCCCGAACATCTAATACACAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505131.1
CDS-3UTR CCA 90 bp CAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCCTTTGCTGCGAGGCACTaGTATGCCCCCAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: QPINLNAVQNIKPSISLSFAARH*YAPSRR
Trigger: CCTTCTGCTGGGGGCATACCAGTGCCTCGCAGCAAA...GGAGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR TCA 90 bp ATTAAGGAGGCAACCACATATACAAGTTCGGCTATAGAAATGTTTGCAAATCAAGGCGCCATCCTTTCCTaGCCCACCCCATCACCCTCA +
Preference number: 4 (lower is better)
Translates to: IKEATTYTSSAIEMFANQGAILS*PTPSPS
Trigger: TGAGGGTGATGGGGTGGGTCAGGAAAGGATGGCGCC...TTGATTTGCAAACATTTCTATAGCCGAACTTGTATATGTGGTTGCCTCCTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CCA 90 bp CATGTCATAACCATGTTACGGACAGTACTTCAATATTTCCGGATTATGGGATTGTGCGCCGAGACGTGGTaGCTGCATATTCTTGCCGGA +
Preference number: 4 (lower is better)
Translates to: HVITMLRTVLQYFRIMGLCAETW*LHILAG
Trigger: TCCGGCAAGAATATGCAGCCACCACGTCTCGGCGCA...CAATCCCATAATCCGGAAATATTGAAGTACTGTCCGTAACATGGTTATGACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR CCA 90 bp CAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCCAAGGGGCACTGGGTCTaGGCAAGCCACTTCTCATTG +
Preference number: 4 (lower is better)
Translates to: QPINLNAVQNIKPSISLSKGHWV*ASHFSL
Trigger: CAATGAGAAGTGGCTTGCCCAGACCCAGTGCCCCTT...GGAGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CCA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAACAGCAGAAGGGGCACTaGGTCTGGGCAAGCCACTTC +
Preference number: 4 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKQQKGH*VWASHF
Trigger: GAAGTGGCTTGCCCAGACCCAGTGCCCCTTCTGCTG...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR TCA 90 bp ATCAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCATAGGAGGCCCAGGTaGGGAGGTGGTTTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: INLSTLMLSRISSLLFLSHRRPR*GGGLCE
Trigger: CTCACACAAACCACCTCCTCACCTGGGCCTCCTATG...AGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR TCA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAACATAGGAGGCCCAGGTaGGGAGGTGGTTTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKHRRPR*GGGLCE
Trigger: CTCACACAAACCACCTCCTCACCTGGGCCTCCTATG...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR TCA 90 bp CTTTTCACTGAGTCAACTTGTGTATTAGATGTTCGGGACAGGTTTGGAAGACTGTCACTGGCTGAAGCCTaGGGTTGCATACGAGGTATT +
Preference number: 4 (lower is better)
Translates to: LFTESTCVLDVRDRFGRLSLAEA*GCIRGI
Trigger: AATACCTCGTATGCAACCTCAGGCTTCAGCCAGTGA...CAGTCTTCCAAACCTGTCCCGAACATCTAATACACAAGTTGACTCAGTGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505131.1
CDS-3UTR CCA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGCAGCAGAAGGGGCACTaGGTCTGGGCAAGCCACTTC +
Preference number: 4 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLQQKGH*VWASHF
Trigger: GAAGTGGCTTGCCCAGACCCAGTGCCCCTTCTGCTG...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR TCA 90 bp CAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCCTTGAGGATGGAGAATTaGAGCCACTGCTGTATGGGC +
Preference number: 4 (lower is better)
Translates to: QPINLNAVQNIKPSISLSLRMEN*SHCCMG
Trigger: GCCCATACAGCAGTGGCTTCAATTCTCCATCCTCAA...GGAGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR TCA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAATCTGTGGGATGGCCTTaGAGTGAAAGGCGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKSVGWP*SERRGC
Trigger: GCAACCTCGCCTTTCACTTCAAGGCCATCCCACAGA...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR TCA 90 bp CATGTCATAACCATGTTACGGACAGTACTTCAATATTTCCGGATTATGGGATTGTGGAGAAGGTATGGCTaGAGCCTGAGGTTGCATACG +
Preference number: 4 (lower is better)
Translates to: HVITMLRTVLQYFRIMGLWRRYG*SLRLHT
Trigger: CGTATGCAACCTCAGGCTTCAGCCATACCTTCTCCA...CAATCCCATAATCCGGAAATATTGAAGTACTGTCCGTAACATGGTTATGACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR TCA 90 bp TGTATCAAGAATAAAGACACACACTACTTGTTCTTTCCTATCATGAAAACCTGCGCTGAGACTGTGCTCTaGACCATAGGAGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: CIKNKDTHYLFFPIMKTCAETVL*TIGGPG
Trigger: ACCTGGGCCTCCTATGGTTCAGAGCACAGTCTCAGC...GCAGGTTTTCATGATAGGAAAGAACAAGTAGTGTGTGTCTTTATTCTTGATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR GCA 90 bp CAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCCGTGGCTGCATATTCTTaGCGGAGACTTTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: QPINLNAVQNIKPSISLSVAAYS*RRLSSC
Trigger: GCAGGAAGAAAGTCTCCGGCAAGAATATGCAGCCAC...GGAGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR GCA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAACCGAGACGTGGTGGCTaGATATTCTTGCCGGAGACT +
Preference number: 4 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKPRRGG*IFLPET
Trigger: AGTCTCCGGCAAGAATATGCAGCCACCACGTCTCGG...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR GCA 90 bp ATCAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCCGAGACGTGGTGGCTaGATATTCTTGCCGGAGACT +
Preference number: 4 (lower is better)
Translates to: INLSTLMLSRISSLLFLSPRRGG*IFLPET
Trigger: AGTCTCCGGCAAGAATATGCAGCCACCACGTCTCGG...AGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR GCA 90 bp ACTTGTGTATTAGATGTTCGGGACAGGTTTGGAAGACTGCGTCTTAGTTTTTCTACGGTCGAGGTGAATTaGGTGGTGATGGTGAAAACC +
Preference number: 4 (lower is better)
Translates to: TCVLDVRDRFGRLRLSFSTVEVN*VVMVKT
Trigger: GGTTTTCACCATCACCACGCAATTCACCTCGACCGT...AGAAAAACTAAGACGCAGTCTTCCAAACCTGTCCCGAACATCTAATACACAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505131.1
CDS-3UTR GCA 90 bp CAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCCGAATTTCTGGGTGACTaGTTAGGTGACGGTCGAGGT +
Preference number: 4 (lower is better)
Translates to: QPINLNAVQNIKPSISLSEFLGD*LGDGRG
Trigger: ACCTCGACCGTCACCTAAGCAGTCACCCAGAAATTC...GGAGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR GCA 90 bp CAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCCAGCCAAAGGAGATGGTaGTGCAGGGGAACGGAATTT +
Preference number: 4 (lower is better)
Translates to: QPINLNAVQNIKPSISLSSQRRW*CRGTEF
Trigger: AAATTCCGTTCCCCTGCAGCACCATCTCCTTTGGCT...GGAGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR GCA 90 bp CAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCCCAAGCCACTTCTCATTaGAGTTGTCCCTGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: QPINLNAVQNIKPSISLSQATSH*SCPCRS
Trigger: AGACCTGCAGGGACAACTGCAATGAGAAGTGGCTTG...GGAGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR GCA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAATCTGCGAACAGGCTGTaGAAGTTTGCTGCGAGGCAC +
Preference number: 4 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKSANRL*KFAARH
Trigger: GTGCCTCGCAGCAAACTTGCACAGCCTGTTCGCAGA...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CCA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGTGCGCCGAGACGTGGTaGCTGCATATTCTTGCCGGA +
Preference number: 4 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLCAETW*LHILAG
Trigger: TCCGGCAAGAATATGCAGCCACCACGTCTCGGCGCA...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CCA 90 bp GATTTTTCCATCCATACAAGAAAAGATGCACGTGATCACCTAAATATTCGCATTTTTGCTGCGAGGCACTaGTATGCCCCCAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: DFSIHTRKDARDHLNIRIFAARH*YAPSRR
Trigger: CCTTCTGCTGGGGGCATACCAGTGCCTCGCAGCAAA...AATGCGAATATTTAGGTGATCACGTGCATCTTTTCTTGTATGGATGGAAAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR TCA 90 bp TGTATCAAGAATAAAGACACACACTACTTGTTCTTTCCTATCATGAAAACCTGCTCTGTGGGATGGCCTTaGAGTGAAAGGCGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: CIKNKDTHYLFFPIMKTCSVGWP*SERRGC
Trigger: GCAACCTCGCCTTTCACTTCAAGGCCATCCCACAGA...GCAGGTTTTCATGATAGGAAAGAACAAGTAGTGTGTGTCTTTATTCTTGATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR TCA 90 bp CATGTCATAACCATGTTACGGACAGTACTTCAATATTTCCGGATTATGGGATTGGGTATGGCTGAAGCCTaGGGTTGCATACGAGGTATT +
Preference number: 4 (lower is better)
Translates to: HVITMLRTVLQYFRIMGLGMAEA*GCIRGI
Trigger: AATACCTCGTATGCAACCTCAGGCTTCAGCCATACC...CAATCCCATAATCCGGAAATATTGAAGTACTGTCCGTAACATGGTTATGACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR TCA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAAGGTGAAGGGTATCCATaGAGCCGTGGACTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKGEGYP*SRGLLH
Trigger: ATGCAGAAGTCCACGGCTTCATGGATACCCTTCACC...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR TCA 90 bp ATTAAGGAGGCAACCACATATACAAGTTCGGCTATAGAAATGTTTGCAAATCAACCTTTGCGAAGTGGCTaGAGCCTGAGGTTGCATACG +
Preference number: 4 (lower is better)
Translates to: IKEATTYTSSAIEMFANQPLRSG*SLRLHT
Trigger: CGTATGCAACCTCAGGCTTCAGCCACTTCGCAAAGG...TTGATTTGCAAACATTTCTATAGCCGAACTTGTATATGTGGTTGCCTCCTTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512093.5
CDS-3UTR GCA 90 bp GATTTTTCCATCCATACAAGAAAAGATGCACGTGATCACCTAAATATTCGCATTAAGATGAACCAGAACTaGGCCGAGACGTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: DFSIHTRKDARDHLNIRIKMNQN*AETWWL
Trigger: CAGCCACCACGTCTCGGCGCAGTTCTGGTTCATCTT...AATGCGAATATTTAGGTGATCACGTGCATCTTTTCTTGTATGGATGGAAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR GCA 90 bp ATTAAGGAGGCAACCACATATACAAGTTCGGCTATAGAAATGTTTGCAAATCAAAAGATGAACCAGAACTaGGCCGAGACGTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: IKEATTYTSSAIEMFANQKMNQN*AETWWL
Trigger: CAGCCACCACGTCTCGGCGCAGTTCTGGTTCATCTT...TTGATTTGCAAACATTTCTATAGCCGAACTTGTATATGTGGTTGCCTCCTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR GCA 90 bp CTTCTGCTGCTTTTCACTGAGTCAACTTGTGTATTAGATGTTCGGGACAGGTTTAGTGAAAGGCGAGGTTaGTGTAAGCGGCTAATCATA +
Preference number: 4 (lower is better)
Translates to: LLLLFTESTCVLDVRDRFSERRG*CKRLII
Trigger: TATGATTAGCCGCTTACAGCAACCTCGCCTTTCACT...AAACCTGTCCCGAACATCTAATACACAAGTTGACTCAGTGAAAAGCAGCAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505131.1
CDS-3UTR GCA 90 bp ATCAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCAAAGGAGATGGTGCTaGAGGGGAACGGAATTTGCC +
Preference number: 4 (lower is better)
Translates to: INLSTLMLSRISSLLFLSQRRWC*RGTEFA
Trigger: GGCAAATTCCGTTCCCCTGCAGCACCATCTCCTTTG...AGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR GCA 90 bp CAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCCGAAGCCGTGGACTTCTaGATTCTTGTCTTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: QPINLNAVQNIKPSISLSEAVDF*ILVFAG
Trigger: ACCAGCAAAGACAAGAATGCAGAAGTCCACGGCTTC...GGAGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CCA 90 bp CAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCCTGGGCTACTGGCATTTaGACTGTAAGGACTGGTGTA +
Preference number: 4 (lower is better)
Translates to: QPINLNAVQNIKPSISLSWATGI*TVRTGV
Trigger: TACACCAGTCCTTACAGTCCAAATGCCAGTAGCCCA...GGAGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CCA 90 bp GATTTTTCCATCCATACAAGAAAAGATGCACGTGATCACCTAAATATTCGCATTAACTGCGCCGAGACGTaGTGGCTGCATATTCTTGCC +
Preference number: 4 (lower is better)
Translates to: DFSIHTRKDARDHLNIRINCAET*WLHILA
Trigger: GGCAAGAATATGCAGCCACCACGTCTCGGCGCAGTT...AATGCGAATATTTAGGTGATCACGTGCATCTTTTCTTGTATGGATGGAAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR CCA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGAACTGCGCCGAGACGTaGTGGCTGCATATTCTTGCC +
Preference number: 4 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLNCAET*WLHILA
Trigger: GGCAAGAATATGCAGCCACCACGTCTCGGCGCAGTT...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CCA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGAAGGGGCACTGGGTCTaGGCAAGCCACTTCTCATTG +
Preference number: 4 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLKGHWV*ASHFSL
Trigger: CAATGAGAAGTGGCTTGCCCAGACCCAGTGCCCCTT...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR TCA 90 bp GATTTTTCCATCCATACAAGAAAAGATGCACGTGATCACCTAAATATTCGCATTGCTGGGAGGATTTGCTaGGACTGTGCTCTGAACCAT +
Preference number: 4 (lower is better)
Translates to: DFSIHTRKDARDHLNIRIAGRIC*DCALNH
Trigger: ATGGTTCAGAGCACAGTCTCAGCAAATCCTCCCAGC...AATGCGAATATTTAGGTGATCACGTGCATCTTTTCTTGTATGGATGGAAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR TCA 90 bp TGTATCAAGAATAAAGACACACACTACTTGTTCTTTCCTATCATGAAAACCTGCGCTGGGAGGATTTGCTaGGACTGTGCTCTGAACCAT +
Preference number: 4 (lower is better)
Translates to: CIKNKDTHYLFFPIMKTCAGRIC*DCALNH
Trigger: ATGGTTCAGAGCACAGTCTCAGCAAATCCTCCCAGC...GCAGGTTTTCATGATAGGAAAGAACAAGTAGTGTGTGTCTTTATTCTTGATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR GCA 90 bp ATCAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCGGAGACTTTCTTCCTaGATCCGGGCTAGAATCTGT +
Preference number: 4 (lower is better)
Translates to: INLSTLMLSRISSLLFLSRRLSS*IRARIC
Trigger: ACAGATTCTAGCCCGGATGCAGGAAGAAAGTCTCCG...AGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR GCA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAACAAGCCACTTCTCATTaGAGTTGTCCCTGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKQATSH*SCPCRS
Trigger: AGACCTGCAGGGACAACTGCAATGAGAAGTGGCTTG...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR GCA 90 bp CAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCCCTGCATTCTTGTCTTTaGTGGTCAGTAACAGCCATC +
Preference number: 4 (lower is better)
Translates to: QPINLNAVQNIKPSISLSLHSCL*WSVTAI
Trigger: GATGGCTGTTACTGACCAGCAAAGACAAGAATGCAG...GGAGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CCA 90 bp CTTCTGCTGCTTTTCACTGAGTCAACTTGTGTATTAGATGTTCGGGACAGGTTTGCTAATCATAGGCTGTaGGGACACTCTACTATATTC +
Preference number: 4 (lower is better)
Translates to: LLLLFTESTCVLDVRDRFANHRL*GHSTIF
Trigger: GAATATAGTAGAGTGTCCCCACAGCCTATGATTAGC...AAACCTGTCCCGAACATCTAATACACAAGTTGACTCAGTGAAAAGCAGCAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505131.1
CDS-3UTR CCA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGTGCCTGGAGAAGGTATaGCTGAAGCCTGAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLCLEKV*LKPEVA
Trigger: TGCAACCTCAGGCTTCAGCCATACCTTCTCCAGGCA...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR CCA 90 bp ACTTGTGTATTAGATGTTCGGGACAGGTTTGGAAGACTGCGTCTTAGTTTTTCTGGAAAAGTAATTCACTaGCTGAAGCCTGAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: TCVLDVRDRFGRLRLSFSGKVIH*LKPEVA
Trigger: TGCAACCTCAGGCTTCAGCCAGTGAATTACTTTTCC...AGAAAAACTAAGACGCAGTCTTCCAAACCTGTCCCGAACATCTAATACACAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505131.1
CDS-3UTR CCA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGTCAGCCTTTGCGAAGTaGCTGAAGCCTGAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLSAFAK*LKPEVA
Trigger: TGCAACCTCAGGCTTCAGCCACTTCGCAAAGGCTGA...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512093.5
CDS-3UTR TCA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGTTGAGGATGGAGAATTaGAGCCACTGCTGTATGGGC +
Preference number: 4 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLLRMEN*SHCCMG
Trigger: GCCCATACAGCAGTGGCTTCAATTCTCCATCCTCAA...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR TCA 90 bp CATGTCATAACCATGTTACGGACAGTACTTCAATATTTCCGGATTATGGGATTGTGTGCATCAAGTTCCTaGTCACTAAAAGTACCCCGT +
Preference number: 4 (lower is better)
Translates to: HVITMLRTVLQYFRIMGLCASSS*SLKVPR
Trigger: ACGGGGTACTTTTAGTGATCAGGAACTTGATGCACA...CAATCCCATAATCCGGAAATATTGAAGTACTGTCCGTAACATGGTTATGACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR TCA 90 bp CTTCTGCTGCTTTTCACTGAGTCAACTTGTGTATTAGATGTTCGGGACAGGTTTTCTGCTGCTTTTCACTaGGTCAACTTGTGTATTAGA +
Preference number: 4 (lower is better)
Translates to: LLLLFTESTCVLDVRDRFSAAFH*VNLCIR
Trigger: TCTAATACACAAGTTGACTCAGTGAAAAGCAGCAGA...AAACCTGTCCCGAACATCTAATACACAAGTTGACTCAGTGAAAAGCAGCAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505131.1
CDS-3UTR TCA 90 bp CATGTCATAACCATGTTACGGACAGTACTTCAATATTTCCGGATTATGGGATTGCTTGTGCTAAATGAATaGCTCTCCACTGGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: HVITMLRTVLQYFRIMGLLVLNE*LSTGQA
Trigger: AGCTTGACCAGTGGAGAGTCATTCATTTAGCACAAG...CAATCCCATAATCCGGAAATATTGAAGTACTGTCCGTAACATGGTTATGACATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR TCA 90 bp ATTAAGGAGGCAACCACATATACAAGTTCGGCTATAGAAATGTTTGCAAATCAAGAAGTGGCTGAAGCCTaGGGTTGCATACGAGGTATT +
Preference number: 4 (lower is better)
Translates to: IKEATTYTSSAIEMFANQEVAEA*GCIRGI
Trigger: AATACCTCGTATGCAACCTCAGGCTTCAGCCACTTC...TTGATTTGCAAACATTTCTATAGCCGAACTTGTATATGTGGTTGCCTCCTTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512093.5
CDS-3UTR GCA 90 bp ATTAAGGAGGCAACCACATATACAAGTTCGGCTATAGAAATGTTTGCAAATCAAGTGGCTGCATATTCTTaGCGGAGACTTTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: IKEATTYTSSAIEMFANQVAAYS*RRLSSC
Trigger: GCAGGAAGAAAGTCTCCGGCAAGAATATGCAGCCAC...TTGATTTGCAAACATTTCTATAGCCGAACTTGTATATGTGGTTGCCTCCTTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR GCA 90 bp GATTTTTCCATCCATACAAGAAAAGATGCACGTGATCACCTAAATATTCGCATTACGGTCGAGGTGAATTaGGTGGTGATGGTGAAAACC +
Preference number: 4 (lower is better)
Translates to: DFSIHTRKDARDHLNIRITVEVN*VVMVKT
Trigger: GGTTTTCACCATCACCACGCAATTCACCTCGACCGT...AATGCGAATATTTAGGTGATCACGTGCATCTTTTCTTGTATGGATGGAAAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR GCA 90 bp ATTAAGGAGGCAACCACATATACAAGTTCGGCTATAGAAATGTTTGCAAATCAAACGGTCGAGGTGAATTaGGTGGTGATGGTGAAAACC +
Preference number: 4 (lower is better)
Translates to: IKEATTYTSSAIEMFANQTVEVN*VVMVKT
Trigger: GGTTTTCACCATCACCACGCAATTCACCTCGACCGT...TTGATTTGCAAACATTTCTATAGCCGAACTTGTATATGTGGTTGCCTCCTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR GCA 90 bp ATTAAGGAGGCAACCACATATACAAGTTCGGCTATAGAAATGTTTGCAAATCAAGAATTTCTGGGTGACTaGTTAGGTGACGGTCGAGGT +
Preference number: 4 (lower is better)
Translates to: IKEATTYTSSAIEMFANQEFLGD*LGDGRG
Trigger: ACCTCGACCGTCACCTAAGCAGTCACCCAGAAATTC...TTGATTTGCAAACATTTCTATAGCCGAACTTGTATATGTGGTTGCCTCCTTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR GCA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGAGCCAAAGGAGATGGTaGTGCAGGGGAACGGAATTT +
Preference number: 4 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLSQRRW*CRGTEF
Trigger: AAATTCCGTTCCCCTGCAGCACCATCTCCTTTGGCT...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR GCA 90 bp CATGTCATAACCATGTTACGGACAGTACTTCAATATTTCCGGATTATGGGATTGGCCATGGTTACTAAATaGTTTCACTGGTTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: HVITMLRTVLQYFRIMGLAMVTK*FHWLPK
Trigger: CTTCGGCAACCAGTGAAAGCATTTAGTAACCATGGC...CAATCCCATAATCCGGAAATATTGAAGTACTGTCCGTAACATGGTTATGACATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR GCA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAAGAAGCCGTGGACTTCTaGATTCTTGTCTTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKEAVDF*ILVFAG
Trigger: ACCAGCAAAGACAAGAATGCAGAAGTCCACGGCTTC...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR GCA 90 bp TGTATCAAGAATAAAGACACACACTACTTGTTCTTTCCTATCATGAAAACCTGCGGTTTTGTTCCAGGTTaGAAGCACCGAGGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: CIKNKDTHYLFFPIMKTCGFVPG*KHRGGV
Trigger: AACACCACCTCGGTGCTTGCAACCTGGAACAAAACC...GCAGGTTTTCATGATAGGAAAGAACAAGTAGTGTGTGTCTTTATTCTTGATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR GCA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAACAGGGGAACGGAATTTaGCTGGAGAAGGTACTCTTT +
Preference number: 4 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKQGNGI*LEKVLF
Trigger: AAAGAGTACCTTCTCCAGGCAAATTCCGTTCCCCTG...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512093.5
CDS-3UTR CCA 90 bp ATCAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTTGCTGTATGGGCTACTaGCATTTGGACTGTAAGGAC +
Preference number: 4 (lower is better)
Translates to: INLSTLMLSRISSLLFLSCCMGY*HLDCKD
Trigger: GTCCTTACAGTCCAAATGCCAGTAGCCCATACAGCA...AGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CCA 90 bp ATTAAGGAGGCAACCACATATACAAGTTCGGCTATAGAAATGTTTGCAAATCAAGAAGCCACTGCTGTATaGGCTACTGGCATTTGGACT +
Preference number: 4 (lower is better)
Translates to: IKEATTYTSSAIEMFANQEATAV*ATGIWT
Trigger: AGTCCAAATGCCAGTAGCCCATACAGCAGTGGCTTC...TTGATTTGCAAACATTTCTATAGCCGAACTTGTATATGTGGTTGCCTCCTTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CCA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGGAAGCCACTGCTGTATaGGCTACTGGCATTTGGACT +
Preference number: 4 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLEATAV*ATGIWT
Trigger: AGTCCAAATGCCAGTAGCCCATACAGCAGTGGCTTC...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CCA 90 bp CTTCTGCTGCTTTTCACTGAGTCAACTTGTGTATTAGATGTTCGGGACAGGTTTTTGTCTGTAAATCTGTaGGATGGCCTTGAAGTGAAA +
Preference number: 4 (lower is better)
Translates to: LLLLFTESTCVLDVRDRFLSVNL*DGLEVK
Trigger: TTTCACTTCAAGGCCATCCCACAGATTTACAGACAA...AAACCTGTCCCGAACATCTAATACACAAGTTGACTCAGTGAAAAGCAGCAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505131.1
CDS-3UTR CCA 90 bp CATGTCATAACCATGTTACGGACAGTACTTCAATATTTCCGGATTATGGGATTGACTAAATGCTTTCACTaGTTGCCGAAGAGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: HVITMLRTVLQYFRIMGLTKCFH*LPKSQR
Trigger: CCTTTGGCTCTTCGGCAACCAGTGAAAGCATTTAGT...CAATCCCATAATCCGGAAATATTGAAGTACTGTCCGTAACATGGTTATGACATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR CCA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAAATAGGTTTTAGGAGCTaGCAAGGATCTGCGAACAGG +
Preference number: 4 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKIGFRS*QGSANR
Trigger: CCTGTTCGCAGATCCTTGCCAGCTCCTAAAACCTAT...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CCA 90 bp CAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCCCTCTCTCTCATGGTATaGTTTTGTTCCAGGTTGCAA +
Preference number: 4 (lower is better)
Translates to: QPINLNAVQNIKPSISLSLSLMV*FCSRLQ
Trigger: TTGCAACCTGGAACAAAACCATACCATGAGAGAGAG...GGAGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CCA 90 bp CATGTCATAACCATGTTACGGACAGTACTTCAATATTTCCGGATTATGGGATTGTATCATGTAGAATTCTaGCGCCATCCTTTCCTGACC +
Preference number: 4 (lower is better)
Translates to: HVITMLRTVLQYFRIMGLYHVEF*RHPFLT
Trigger: GGTCAGGAAAGGATGGCGCCAGAATTCTACATGATA...CAATCCCATAATCCGGAAATATTGAAGTACTGTCCGTAACATGGTTATGACATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR TCA 90 bp ATTAAGGAGGCAACCACATATACAAGTTCGGCTATAGAAATGTTTGCAAATCAATGTAGAATTGCAAGATaGACCAGAACTGCGCCGAGA +
Preference number: 4 (lower is better)
Translates to: IKEATTYTSSAIEMFANQCRIAR*TRTAPR
Trigger: TCTCGGCGCAGTTCTGGTTCATCTTGCAATTCTACA...TTGATTTGCAAACATTTCTATAGCCGAACTTGTATATGTGGTTGCCTCCTTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR TCA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAATGTGCATCAAGTTCCTaGTCACTAAAAGTACCCCGT +
Preference number: 4 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKCASSS*SLKVPR
Trigger: ACGGGGTACTTTTAGTGATCAGGAACTTGATGCACA...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR TCA 90 bp TGTATCAAGAATAAAGACACACACTACTTGTTCTTTCCTATCATGAAAACCTGCAGGAGGTGGTTTGTGTaGGCTGTGTTATTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: CIKNKDTHYLFFPIMKTCRRWFV*AVLFLG
Trigger: GCCAAGAAATAACACAGCTCACACAAACCACCTCCT...GCAGGTTTTCATGATAGGAAAGAACAAGTAGTGTGTGTCTTTATTCTTGATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR TCA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGACTATCTGGTGGTGGTaGCATGTGAGCTACATCCAA +
Preference number: 4 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLTIWWW*HVSYIQ
Trigger: TTGGATGTAGCTCACATGTCACCACCACCAGATAGT...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR TCA 90 bp TGTATCAAGAATAAAGACACACACTACTTGTTCTTTCCTATCATGAAAACCTGCGCTGCTTGTGCTAAATaGATGACTCTCCACTGGTCA +
Preference number: 4 (lower is better)
Translates to: CIKNKDTHYLFFPIMKTCAACAK*MTLHWS
Trigger: TGACCAGTGGAGAGTCATTCATTTAGCACAAGCAGC...GCAGGTTTTCATGATAGGAAAGAACAAGTAGTGTGTGTCTTTATTCTTGATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR GCA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAAAGTGAAAGGCGAGGTTaGTGTAAGCGGCTAATCATA +
Preference number: 4 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKSERRG*CKRLII
Trigger: TATGATTAGCCGCTTACAGCAACCTCGCCTTTCACT...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR GCA 90 bp ACTTGTGTATTAGATGTTCGGGACAGGTTTGGAAGACTGCGTCTTAGTTTTTCTTTGAGTCACTTCTGCTaGTTTTCACTGAGTCAACTT +
Preference number: 4 (lower is better)
Translates to: TCVLDVRDRFGRLRLSFSLSHFC*FSLSQL
Trigger: AAGTTGACTCAGTGAAAAGCAGCAGAAGTGACTCAA...AGAAAAACTAAGACGCAGTCTTCCAAACCTGTCCCGAACATCTAATACACAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505131.1
CDS-3UTR GCA 90 bp ATCAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTGCCATGGTTACTAAATaGTTTCACTGGTTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: INLSTLMLSRISSLLFLSAMVTK*FHWLPK
Trigger: CTTCGGCAACCAGTGAAAGCATTTAGTAACCATGGC...AGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR GCA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAACTGCATTCTTGTCTTTaGTGGTCAGTAACAGCCATC +
Preference number: 4 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKLHSCL*WSVTAI
Trigger: GATGGCTGTTACTGACCAGCAAAGACAAGAATGCAG...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CCA 90 bp CATGTCATAACCATGTTACGGACAGTACTTCAATATTTCCGGATTATGGGATTGCTCAACATCAGGACTTaGGTAATCCAAAACTTGCCT +
Preference number: 4 (lower is better)
Translates to: HVITMLRTVLQYFRIMGLLNIRT*VIQNLP
Trigger: AGGCAAGTTTTGGATTACCCAAGTCCTGATGTTGAG...CAATCCCATAATCCGGAAATATTGAAGTACTGTCCGTAACATGGTTATGACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR CCA 90 bp TGTATCAAGAATAAAGACACACACTACTTGTTCTTTCCTATCATGAAAACCTGCTGCTGTATGGGCTACTaGCATTTGGACTGTAAGGAC +
Preference number: 4 (lower is better)
Translates to: CIKNKDTHYLFFPIMKTCCCMGY*HLDCKD
Trigger: GTCCTTACAGTCCAAATGCCAGTAGCCCATACAGCA...GCAGGTTTTCATGATAGGAAAGAACAAGTAGTGTGTGTCTTTATTCTTGATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CCA 90 bp ATCAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTAGCTGTGTTATTTCTTaGCTACCAGGAGAACCAGAG +
Preference number: 4 (lower is better)
Translates to: INLSTLMLSRISSLLFLSSCVIS*LPGEPE
Trigger: CTCTGGTTCTCCTGGTAGCCAAGAAATAACACAGCT...AGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CCA 90 bp ATTAAGGAGGCAACCACATATACAAGTTCGGCTATAGAAATGTTTGCAAATCAAATAGGTTTTAGGAGCTaGCAAGGATCTGCGAACAGG +
Preference number: 4 (lower is better)
Translates to: IKEATTYTSSAIEMFANQIGFRS*QGSANR
Trigger: CCTGTTCGCAGATCCTTGCCAGCTCCTAAAACCTAT...TTGATTTGCAAACATTTCTATAGCCGAACTTGTATATGTGGTTGCCTCCTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CCA 90 bp CATGTCATAACCATGTTACGGACAGTACTTCAATATTTCCGGATTATGGGATTGCTCTCTCTCATGGTATaGTTTTGTTCCAGGTTGCAA +
Preference number: 4 (lower is better)
Translates to: HVITMLRTVLQYFRIMGLLSLMV*FCSRLQ
Trigger: TTGCAACCTGGAACAAAACCATACCATGAGAGAGAG...CAATCCCATAATCCGGAAATATTGAAGTACTGTCCGTAACATGGTTATGACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR CCA 90 bp TGTATCAAGAATAAAGACACACACTACTTGTTCTTTCCTATCATGAAAACCTGCTCCCCCTCTCTCTCATaGTATGGTTTTGTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: CIKNKDTHYLFFPIMKTCSPSLS*YGFVPG
Trigger: ACCTGGAACAAAACCATACCATGAGAGAGAGGGGGA...GCAGGTTTTCATGATAGGAAAGAACAAGTAGTGTGTGTCTTTATTCTTGATACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CCA 90 bp ATTAAGGAGGCAACCACATATACAAGTTCGGCTATAGAAATGTTTGCAAATCAATCCCCCTCTCTCTCATaGTATGGTTTTGTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: IKEATTYTSSAIEMFANQSPSLS*YGFVPG
Trigger: ACCTGGAACAAAACCATACCATGAGAGAGAGGGGGA...TTGATTTGCAAACATTTCTATAGCCGAACTTGTATATGTGGTTGCCTCCTTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR TCA 90 bp CATGTCATAACCATGTTACGGACAGTACTTCAATATTTCCGGATTATGGGATTGTCTGCTGCTTTTCACTaGGTCAACTTGTGTATTAGA +
Preference number: 4 (lower is better)
Translates to: HVITMLRTVLQYFRIMGLSAAFH*VNLCIR
Trigger: TCTAATACACAAGTTGACTCAGTGAAAAGCAGCAGA...CAATCCCATAATCCGGAAATATTGAAGTACTGTCCGTAACATGGTTATGACATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR TCA 90 bp CAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCCTGGAGAGTGATTGTATaGTTACCAAACACATCTGAT +
Preference number: 4 (lower is better)
Translates to: QPINLNAVQNIKPSISLSWRVIV*LPNTSD
Trigger: ATCAGATGTGTTTGGTAATCATACAATCACTCTCCA...GGAGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR TCA 90 bp ATTAAGGAGGCAACCACATATACAAGTTCGGCTATAGAAATGTTTGCAAATCAACTTGTGCTAAATGAATaGCTCTCCACTGGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: IKEATTYTSSAIEMFANQLVLNE*LSTGQA
Trigger: AGCTTGACCAGTGGAGAGTCATTCATTTAGCACAAG...TTGATTTGCAAACATTTCTATAGCCGAACTTGTATATGTGGTTGCCTCCTTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR TCA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAACATAATCCAACCCCATaGAGACTAAATCTGAAAGGG +
Preference number: 4 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKHNPTP*RLNLKG
Trigger: CCCTTTCAGATTTAGTCTTCATGGGGTTGGATTATG...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR GCA 90 bp TGTATCAAGAATAAAGACACACACTACTTGTTCTTTCCTATCATGAAAACCTGCAGTGAAAGGCGAGGTTaGTGTAAGCGGCTAATCATA +
Preference number: 4 (lower is better)
Translates to: CIKNKDTHYLFFPIMKTCSERRG*CKRLII
Trigger: TATGATTAGCCGCTTACAGCAACCTCGCCTTTCACT...GCAGGTTTTCATGATAGGAAAGAACAAGTAGTGTGTGTCTTTATTCTTGATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR GCA 90 bp GATTTTTCCATCCATACAAGAAAAGATGCACGTGATCACCTAAATATTCGCATTAATGCTTTCACTGGTTaGCGAAGAGCCAAAGGAGAT +
Preference number: 4 (lower is better)
Translates to: DFSIHTRKDARDHLNIRINAFTG*RRAKGD
Trigger: ATCTCCTTTGGCTCTTCGGCAACCAGTGAAAGCATT...AATGCGAATATTTAGGTGATCACGTGCATCTTTTCTTGTATGGATGGAAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR GCA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGAATGCTTTCACTGGTTaGCGAAGAGCCAAAGGAGAT +
Preference number: 4 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLNAFTG*RRAKGD
Trigger: ATCTCCTTTGGCTCTTCGGCAACCAGTGAAAGCATT...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CCA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGACTAAATGCTTTCACTaGTTGCCGAAGAGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLTKCFH*LPKSQR
Trigger: CCTTTGGCTCTTCGGCAACCAGTGAAAGCATTTAGT...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CCA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGAGCTGTGTTATTTCTTaGCTACCAGGAGAACCAGAG +
Preference number: 4 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLSCVIS*LPGEPE
Trigger: CTCTGGTTCTCCTGGTAGCCAAGAAATAACACAGCT...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CCA 90 bp GATTTTTCCATCCATACAAGAAAAGATGCACGTGATCACCTAAATATTCGCATTGTATCCATGAAGCCGTaGACTTCTGCATTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: DFSIHTRKDARDHLNIRIVSMKP*TSAFLS
Trigger: AGACAAGAATGCAGAAGTCCACGGCTTCATGGATAC...AATGCGAATATTTAGGTGATCACGTGCATCTTTTCTTGTATGGATGGAAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR CCA 90 bp TGTATCAAGAATAAAGACACACACTACTTGTTCTTTCCTATCATGAAAACCTGCGTATCCATGAAGCCGTaGACTTCTGCATTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: CIKNKDTHYLFFPIMKTCVSMKP*TSAFLS
Trigger: AGACAAGAATGCAGAAGTCCACGGCTTCATGGATAC...GCAGGTTTTCATGATAGGAAAGAACAAGTAGTGTGTGTCTTTATTCTTGATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CCA 90 bp TGTATCAAGAATAAAGACACACACTACTTGTTCTTTCCTATCATGAAAACCTGCTATCATGTAGAATTCTaGCGCCATCCTTTCCTGACC +
Preference number: 4 (lower is better)
Translates to: CIKNKDTHYLFFPIMKTCYHVEF*RHPFLT
Trigger: GGTCAGGAAAGGATGGCGCCAGAATTCTACATGATA...GCAGGTTTTCATGATAGGAAAGAACAAGTAGTGTGTGTCTTTATTCTTGATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR TCA 90 bp CATGTCATAACCATGTTACGGACAGTACTTCAATATTTCCGGATTATGGGATTGAGAGCTGACATAGTTTaGTCAAGTTTGTGGATAAGA +
Preference number: 4 (lower is better)
Translates to: HVITMLRTVLQYFRIMGLRADIV*SSLWIR
Trigger: TCTTATCCACAAACTTGATCAAACTATGTCAGCTCT...CAATCCCATAATCCGGAAATATTGAAGTACTGTCCGTAACATGGTTATGACATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR TCA 90 bp GATTTTTCCATCCATACAAGAAAAGATGCACGTGATCACCTAAATATTCGCATTCTGCCTCTTGAGAGCTaGCATAGTTTGATCAAGTTT +
Preference number: 4 (lower is better)
Translates to: DFSIHTRKDARDHLNIRILPLES*HSLIKF
Trigger: AAACTTGATCAAACTATGTCAGCTCTCAAGAGGCAG...AATGCGAATATTTAGGTGATCACGTGCATCTTTTCTTGTATGGATGGAAAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR TCA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGGCAGGGTATACTGCATaGTGCATATTGTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLAGYTA*CILSSS
Trigger: TGAAGATGACAATATGCATCATGCAGTATACCCTGC...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR TCA 90 bp TGTATCAAGAATAAAGACACACACTACTTGTTCTTTCCTATCATGAAAACCTGCGCAGGGTATACTGCATaGTGCATATTGTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: CIKNKDTHYLFFPIMKTCAGYTA*CILSSS
Trigger: TGAAGATGACAATATGCATCATGCAGTATACCCTGC...GCAGGTTTTCATGATAGGAAAGAACAAGTAGTGTGTGTCTTTATTCTTGATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR GCA 90 bp ATCAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTTTGAGTCACTTCTGCTaGTTTTCACTGAGTCAACTT +
Preference number: 4 (lower is better)
Translates to: INLSTLMLSRISSLLFLSLSHFC*FSLSQL
Trigger: AAGTTGACTCAGTGAAAAGCAGCAGAAGTGACTCAA...AGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR GCA 90 bp ATCAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTAACATGATGGATACATaGTGTAACACTATCTGGTGG +
Preference number: 4 (lower is better)
Translates to: INLSTLMLSRISSLLFLSNMMDT*CNTIWW
Trigger: CCACCAGATAGTGTTACAGCATGTATCCATCATGTT...AGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR GCA 90 bp ATCAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTGACCTTAAAGGACCATaGTTAACGTCAAAAATGGAC +
Preference number: 4 (lower is better)
Translates to: INLSTLMLSRISSLLFLSDLKGP*LTSKMD
Trigger: GTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC...AGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CCA 90 bp TGTATCAAGAATAAAGACACACACTACTTGTTCTTTCCTATCATGAAAACCTGCGCTAATCATAGGCTGTaGGGACACTCTACTATATTC +
Preference number: 4 (lower is better)
Translates to: CIKNKDTHYLFFPIMKTCANHRL*GHSTIF
Trigger: GAATATAGTAGAGTGTCCCCACAGCCTATGATTAGC...GCAGGTTTTCATGATAGGAAAGAACAAGTAGTGTGTGTCTTTATTCTTGATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CCA 90 bp ATTAAGGAGGCAACCACATATACAAGTTCGGCTATAGAAATGTTTGCAAATCAAGCTAATCATAGGCTGTaGGGACACTCTACTATATTC +
Preference number: 4 (lower is better)
Translates to: IKEATTYTSSAIEMFANQANHRL*GHSTIF
Trigger: GAATATAGTAGAGTGTCCCCACAGCCTATGATTAGC...TTGATTTGCAAACATTTCTATAGCCGAACTTGTATATGTGGTTGCCTCCTTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CCA 90 bp ATCAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTTTGTCTGTAAATCTGTaGGATGGCCTTGAAGTGAAA +
Preference number: 4 (lower is better)
Translates to: INLSTLMLSRISSLLFLSLSVNL*DGLEVK
Trigger: TTTCACTTCAAGGCCATCCCACAGATTTACAGACAA...AGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CCA 90 bp CATGTCATAACCATGTTACGGACAGTACTTCAATATTTCCGGATTATGGGATTGTTCAAAATACATCAGTaGTTGAACCTCCATATGGGT +
Preference number: 4 (lower is better)
Translates to: HVITMLRTVLQYFRIMGLFKIHQ*LNLHMG
Trigger: ACCCATATGGAGGTTCAACCACTGATGTATTTTGAA...CAATCCCATAATCCGGAAATATTGAAGTACTGTCCGTAACATGGTTATGACATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR CCA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGGGAACGGAATTTGCCTaGAGAAGGTACTCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLGTEFA*RRYSFC
Trigger: ACAAAAAGAGTACCTTCTCCAGGCAAATTCCGTTCC...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512093.5
CDS-3UTR TCA 90 bp TGTATCAAGAATAAAGACACACACTACTTGTTCTTTCCTATCATGAAAACCTGCTCTGCTGCTTTTCACTaGGTCAACTTGTGTATTAGA +
Preference number: 4 (lower is better)
Translates to: CIKNKDTHYLFFPIMKTCSAAFH*VNLCIR
Trigger: TCTAATACACAAGTTGACTCAGTGAAAAGCAGCAGA...GCAGGTTTTCATGATAGGAAAGAACAAGTAGTGTGTGTCTTTATTCTTGATACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR TCA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAAAAGTTTTGGATAGCCTaGATTCACCATTTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKKFWIA*IHHFLV
Trigger: CACAAGAAAATGGTGAATTCAGGCTATCCAAAACTT...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR TCA 90 bp TGTATCAAGAATAAAGACACACACTACTTGTTCTTTCCTATCATGAAAACCTGCTGTGTCAATGCAACATaGTGGATACATGCTGTAACA +
Preference number: 4 (lower is better)
Translates to: CIKNKDTHYLFFPIMKTCCVNAT*WIHAVT
Trigger: TGTTACAGCATGTATCCATCATGTTGCATTGACACA...GCAGGTTTTCATGATAGGAAAGAACAAGTAGTGTGTGTCTTTATTCTTGATACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR TCA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAATGTTGCACTGAAAACTaGGACTTGTTCTGTTTTGTA +
Preference number: 4 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKCCTEN*DLFCFV
Trigger: TACAAAACAGAACAAGTCTCAGTTTTCAGTGCAACA...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR TCA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAAAAATACATCAGTGGTTaGACCTCCATATGGGTTTTT +
Preference number: 4 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKKYISG*TSIWVF
Trigger: AAAAACCCATATGGAGGTTCAACCACTGATGTATTT...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR GCA 90 bp ATTAAGGAGGCAACCACATATACAAGTTCGGCTATAGAAATGTTTGCAAATCAATTGAGTCACTTCTGCTaGTTTTCACTGAGTCAACTT +
Preference number: 4 (lower is better)
Translates to: IKEATTYTSSAIEMFANQLSHFC*FSLSQL
Trigger: AAGTTGACTCAGTGAAAAGCAGCAGAAGTGACTCAA...TTGATTTGCAAACATTTCTATAGCCGAACTTGTATATGTGGTTGCCTCCTTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR GCA 90 bp ATTAAGGAGGCAACCACATATACAAGTTCGGCTATAGAAATGTTTGCAAATCAAAACATGATGGATACATaGTGTAACACTATCTGGTGG +
Preference number: 4 (lower is better)
Translates to: IKEATTYTSSAIEMFANQNMMDT*CNTIWW
Trigger: CCACCAGATAGTGTTACAGCATGTATCCATCATGTT...TTGATTTGCAAACATTTCTATAGCCGAACTTGTATATGTGGTTGCCTCCTTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR GCA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAAAGTTTGATGTGTCAATaGAACATGATGGATACATGC +
Preference number: 4 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKSLMCQ*NMMDTC
Trigger: GCATGTATCCATCATGTTGCATTGACACATCAAACT...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR GCA 90 bp GATTTTTCCATCCATACAAGAAAAGATGCACGTGATCACCTAAATATTCGCATTGACCTTAAAGGACCATaGTTAACGTCAAAAATGGAC +
Preference number: 4 (lower is better)
Translates to: DFSIHTRKDARDHLNIRIDLKGP*LTSKMD
Trigger: GTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC...AATGCGAATATTTAGGTGATCACGTGCATCTTTTCTTGTATGGATGGAAAAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR CCA 90 bp ATTAAGGAGGCAACCACATATACAAGTTCGGCTATAGAAATGTTTGCAAATCAATTGTCTGTAAATCTGTaGGATGGCCTTGAAGTGAAA +
Preference number: 4 (lower is better)
Translates to: IKEATTYTSSAIEMFANQLSVNL*DGLEVK
Trigger: TTTCACTTCAAGGCCATCCCACAGATTTACAGACAA...TTGATTTGCAAACATTTCTATAGCCGAACTTGTATATGTGGTTGCCTCCTTAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CCA 90 bp TGTATCAAGAATAAAGACACACACTACTTGTTCTTTCCTATCATGAAAACCTGCATGGGCATTTCTCTTTaGCATCCATTAGGTATTTGC +
Preference number: 4 (lower is better)
Translates to: CIKNKDTHYLFFPIMKTCMGISL*HPLGIC
Trigger: GCAAATACCTAATGGATGCCAAAGAGAAATGCCCAT...GCAGGTTTTCATGATAGGAAAGAACAAGTAGTGTGTGTCTTTATTCTTGATACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CCA 90 bp ATCAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCAATCTGTAGTTTCCTaGTGTACTAGTGAAACACTT +
Preference number: 4 (lower is better)
Translates to: INLSTLMLSRISSLLFLSQSVVS*CTSETL
Trigger: AAGTGTTTCACTAGTACACCAGGAAACTACAGATTG...AGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CCA 90 bp TGTATCAAGAATAAAGACACACACTACTTGTTCTTTCCTATCATGAAAACCTGCTTGCAAGCACCGAGGTaGTGTTGTATCAAGAATAAA +
Preference number: 4 (lower is better)
Translates to: CIKNKDTHYLFFPIMKTCLQAPR*CCIKNK
Trigger: TTTATTCTTGATACAACACCACCTCGGTGCTTGCAA...GCAGGTTTTCATGATAGGAAAGAACAAGTAGTGTGTGTCTTTATTCTTGATACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR TCA 90 bp TGTATCAAGAATAAAGACACACACTACTTGTTCTTTCCTATCATGAAAACCTGCAAGTTTTGGATAGCCTaGATTCACCATTTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: CIKNKDTHYLFFPIMKTCKFWIA*IHHFLV
Trigger: CACAAGAAAATGGTGAATTCAGGCTATCCAAAACTT...GCAGGTTTTCATGATAGGAAAGAACAAGTAGTGTGTGTCTTTATTCTTGATACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR TCA 90 bp GATTTTTCCATCCATACAAGAAAAGATGCACGTGATCACCTAAATATTCGCATTTGTTGCACTGAAAACTaGGACTTGTTCTGTTTTGTA +
Preference number: 4 (lower is better)
Translates to: DFSIHTRKDARDHLNIRICCTEN*DLFCFV
Trigger: TACAAAACAGAACAAGTCTCAGTTTTCAGTGCAACA...AATGCGAATATTTAGGTGATCACGTGCATCTTTTCTTGTATGGATGGAAAAATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR TCA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGAAGAAAAGATGCACGTaGTCACCTAAATATTCGCAT +
Preference number: 4 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLKKRCT*SPKYSH
Trigger: ATGCGAATATTTAGGTGATCACGTGCATCTTTTCTT...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR GCA 90 bp ATTAAGGAGGCAACCACATATACAAGTTCGGCTATAGAAATGTTTGCAAATCAAAGTTTGATGTGTCAATaGAACATGATGGATACATGC +
Preference number: 4 (lower is better)
Translates to: IKEATTYTSSAIEMFANQSLMCQ*NMMDTC
Trigger: GCATGTATCCATCATGTTGCATTGACACATCAAACT...TTGATTTGCAAACATTTCTATAGCCGAACTTGTATATGTGGTTGCCTCCTTAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR GCA 90 bp GATTTTTCCATCCATACAAGAAAAGATGCACGTGATCACCTAAATATTCGCATTTCTCCCAATTTCTTTTaGCAACTTACGGAATGTCTT +
Preference number: 4 (lower is better)
Translates to: DFSIHTRKDARDHLNIRISPNFF*QLTECL
Trigger: AAGACATTCCGTAAGTTGGCAAAAGAAATTGGGAGA...AATGCGAATATTTAGGTGATCACGTGCATCTTTTCTTGTATGGATGGAAAAATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR GCA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGTCTCCCAATTTCTTTTaGCAACTTACGGAATGTCTT +
Preference number: 4 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLSPNFF*QLTECL
Trigger: AAGACATTCCGTAAGTTGGCAAAAGAAATTGGGAGA...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR GCA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAATATGGGTTTTTCTGTTaGACTGAGTATATAACAGGT +
Preference number: 4 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKYGFFC*TEYITG
Trigger: ACCTGTTATATACTCAGTGCAACAGAAAAACCCATA...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000264313.11
3UTR CAA 72 bp GACTTATATTTAGGATCATTCAAAATACATCAGTGGTaGAACCTCCATATGGGTTTTTCTGTTGCACTGAGT +
Preference number: 4 (lower is better)
Translates to: DLYLGSFKIHQW*NLHMGFSVALS
Trigger: ACTCAGTGCAACAGAAAAACCCATATGGAGGTTCAACCACTGATGTATTTTGAATGATCCTAAATATAAGTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264313.11
3UTR CAA 72 bp AGGAATATGGAGAACTCATTAAACAGTGTACAATTCTaGATTTTTCCATCCATACAAGAAAAGATGCACGTG +
Preference number: 4 (lower is better)
Translates to: RNMENSLNSVQF*IFPSIQEKMHV
Trigger: CACGTGCATCTTTTCTTGTATGGATGGAAAAATCAAGAATTGTACACTGTTTAATGAGTTCTCCATATTCCT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR CCA 90 bp ATTAAGGAGGCAACCACATATACAAGTTCGGCTATAGAAATGTTTGCAAATCAAAAGGGCAATATGATTTaGGTTTCTGTGGTTAAAGAA +
Preference number: 4 (lower is better)
Translates to: IKEATTYTSSAIEMFANQKGNMI*VSVVKE
Trigger: TTCTTTAACCACAGAAACCCAAATCATATTGCCCTT...TTGATTTGCAAACATTTCTATAGCCGAACTTGTATATGTGGTTGCCTCCTTAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR CCA 90 bp GATTTTTCCATCCATACAAGAAAAGATGCACGTGATCACCTAAATATTCGCATTAATATTTCCGGATTATaGGATTGCAGACAACTATCA +
Preference number: 4 (lower is better)
Translates to: DFSIHTRKDARDHLNIRINISGL*DCRQLS
Trigger: TGATAGTTGTCTGCAATCCCATAATCCGGAAATATT...AATGCGAATATTTAGGTGATCACGTGCATCTTTTCTTGTATGGATGGAAAAATC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS CCA 90 bp TGGCAAGGATCTGCGAACAGGCTGTGCAAGTTTGCTGCGAGGCACTaGTATGCCCCCAGCAGAAGGGGCACTGGGTCTGGGCAAGCCACT +
Preference number: 5 (lower is better)
Translates to: WQGSANRLCKFAARH*YAPSRRGTGSGQAT
Trigger: AGTGGCTTGCCCAGACCCAGTGCCCCTTCTGCTGGGGGCATACCAGTGCCTCGCAGCAAACTTGCACAGCCTGTTCGCAGATCCTTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS CCA 90 bp TGCCACTTACCTGCGAACAGGCTGTGCAAGTTTGCTGCGAGGCACTaGTATGCCCCCAGCAGAAGGGGCACTGGGTCTGGGCAAGCCACT +
Preference number: 5 (lower is better)
Translates to: CHLPANRLCKFAARH*YAPSRRGTGSGQAT
Trigger: AGTGGCTTGCCCAGACCCAGTGCCCCTTCTGCTGGGGGCATACCAGTGCCTCGCAGCAAACTTGCACAGCCTGTTCGCAGGTAAGTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510595.1
CDS GCA 90 bp AGGATCTGCGAACAGGCTGTGCAAGTTTGCTGCGAGGCACTGGTATaGCCCCAGCAGAAGGGGCACTGGGTCTGGGCAAGCCACTTCTCA +
Preference number: 5 (lower is better)
Translates to: RICEQAVQVCCEALV*PQQKGHWVWASHFS
Trigger: TGAGAAGTGGCTTGCCCAGACCCAGTGCCCCTTCTGCTGGGGGCATACCAGTGCCTCGCAGCAAACTTGCACAGCCTGTTCGCAGATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS GCA 90 bp CTTACCTGCGAACAGGCTGTGCAAGTTTGCTGCGAGGCACTGGTATaGCCCCAGCAGAAGGGGCACTGGGTCTGGGCAAGCCACTTCTCA +
Preference number: 5 (lower is better)
Translates to: LTCEQAVQVCCEALV*PQQKGHWVWASHFS
Trigger: TGAGAAGTGGCTTGCCCAGACCCAGTGCCCCTTCTGCTGGGGGCATACCAGTGCCTCGCAGCAAACTTGCACAGCCTGTTCGCAGGTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510595.1
CDS CCA 90 bp TGCTGCGAGGCACTGGTATGCCCCCAGCAGAAGGGGCACTGGGTCTaGGCAAGCCACTTCTCATTGCAGTTGTCCCTGCAGGTCTGGTTA +
Preference number: 5 (lower is better)
Translates to: CCEALVCPQQKGHWV*ASHFSLQLSLQVWL
Trigger: TAACCAGACCTGCAGGGACAACTGCAATGAGAAGTGGCTTGCCCAGACCCAGTGCCCCTTCTGCTGGGGGCATACCAGTGCCTCGCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264313.11
ENST00000510595.1
ENST00000512093.5
CDS CCA 90 bp CAAGTTTGCTGCGAGGCACTGGTATGCCCCCAGCAGAAGGGGCACTaGGTCTGGGCAAGCCACTTCTCATTGCAGTTGTCCCTGCAGGTC +
Preference number: 5 (lower is better)
Translates to: QVCCEALVCPQQKGH*VWASHFSLQLSLQV
Trigger: GACCTGCAGGGACAACTGCAATGAGAAGTGGCTTGCCCAGACCCAGTGCCCCTTCTGCTGGGGGCATACCAGTGCCTCGCAGCAAACTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264313.11
ENST00000510595.1
ENST00000512093.5
CDS GCA 90 bp ACAGAACATCTGCCACTTACCTGCGAACAGGCTGTGCAAGTTTGCTaGGAGGCACTGGTATGCCCCCAGCAGAAGGGGCACTGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: TEHLPLTCEQAVQVC*EALVCPQQKGHWVW
Trigger: CCAGACCCAGTGCCCCTTCTGCTGGGGGCATACCAGTGCCTCGCAGCAAACTTGCACAGCCTGTTCGCAGGTAAGTGGCAGATGTTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510595.1
CDS GCA 90 bp GAAACAGAACATCTGCCACTTACCTGCGAACAGGCTGTGCAAGTTTaGTGCGAGGCACTGGTATGCCCCCAGCAGAAGGGGCACTGGGTC +
Preference number: 5 (lower is better)
Translates to: ETEHLPLTCEQAVQV*CEALVCPQQKGHWV
Trigger: GACCCAGTGCCCCTTCTGCTGGGGGCATACCAGTGCCTCGCAGCAAACTTGCACAGCCTGTTCGCAGGTAAGTGGCAGATGTTCTGTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510595.1
CDS GCA 90 bp AGAATGCTGAAACAGAACATCTGCCACTTACCTGCGAACAGGCTGTaGAAGTTTGCTGCGAGGCACTGGTATGCCCCCAGCAGAAGGGGC +
Preference number: 5 (lower is better)
Translates to: RMLKQNICHLPANRL*KFAARHWYAPSRRG
Trigger: GCCCCTTCTGCTGGGGGCATACCAGTGCCTCGCAGCAAACTTGCACAGCCTGTTCGCAGGTAAGTGGCAGATGTTCTGTTTCAGCATTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510595.1
CDS GCA 90 bp TTTCAGGCACTCAAGAATGCTGAAACAGAACATCTGCCACTTACCTaGGAACAGGCTGTGCAAGTTTGCTGCGAGGCACTGGTATGCCCC +
Preference number: 5 (lower is better)
Translates to: FQALKNAETEHLPLT*EQAVQVCCEALVCP
Trigger: GGGGCATACCAGTGCCTCGCAGCAAACTTGCACAGCCTGTTCGCAGGTAAGTGGCAGATGTTCTGTTTCAGCATTCTTGAGTGCCTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510595.1
CDS TCA 90 bp AATTGCGTGGTGATGGTGAAAACCCCGTCTTGTAGAATTGCAAGATaGACCAGAACTGCGCCGAGACGTGGTGGCTGCATATTCTTGCCG +
Preference number: 5 (lower is better)
Translates to: NCVVMVKTPSCRIAR*TRTAPRRGGCIFLP
Trigger: CGGCAAGAATATGCAGCCACCACGTCTCGGCGCAGTTCTGGTTCATCTTGCAATTCTACAAGACGGGGTTTTCACCATCACCACGCAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505131.1
CDS TCA 90 bp TCCAGGAAGTATAAGCTGTTTGACTATAGGAGGTCGCACTGGGGTTaGGGATGGAGAATTGAAGCCACTGCTGTATGGGCTACTGGCATT +
Preference number: 5 (lower is better)
Translates to: SRKYKLFDYRRSHWG*GWRIEATAVWATGI
Trigger: AATGCCAGTAGCCCATACAGCAGTGGCTTCAATTCTCCATCCTCAACCCCAGTGCGACCTCCTATAGTCAAACAGCTTATACTTCCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264313.11
ENST00000506375.1
ENST00000512093.5
CDS TCA 90 bp AAGTTCCTGATCACTAAAAGTACCCCGTCTTGTAGAATTGCAAGATaGACCAGAACTGCGCCGAGACGTGGTGGCTGCATATTCTTGCCG +
Preference number: 5 (lower is better)
Translates to: KFLITKSTPSCRIAR*TRTAPRRGGCIFLP
Trigger: CGGCAAGAATATGCAGCCACCACGTCTCGGCGCAGTTCTGGTTCATCTTGCAATTCTACAAGACGGGGTACTTTTAGTGATCAGGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp GTAATTCACTGGCTGAAGCCTGAGGTTGCATACGAGGTATTCCTCCGTTTGGCACCCCGTCTTGTAGAATaGCAAGATGAACCAGAACTG +
Preference number: 5 (lower is better)
Translates to: VIHWLKPEVAYEVFLRLAPRLVE*QDEPEL
Trigger: CAGTTCTGGTTCATCTTGCAATTCTACAAGACGGGG...TGCCAAACGGAGGAATACCTCGTATGCAACCTCAGGCTTCAGCCAGTGAATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505131.1
CDS GCA 90 bp ACTAAATGCTTTCACTGGTTGCCGAAGAGCCAAAGGAGATGGTGCTaGAGGGGAACGGAATTTGCCTGGAGAAGGTACTCTTTTTGTAGA +
Preference number: 5 (lower is better)
Translates to: TKCFHWLPKSQRRWC*RGTEFAWRRYSFCR
Trigger: TCTACAAAAAGAGTACCTTCTCCAGGCAAATTCCGTTCCCCTGCAGCACCATCTCCTTTGGCTCTTCGGCAACCAGTGAAAGCATTTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510595.1
ENST00000512093.5
CDS GCA 90 bp GTTACTAAATGCTTTCACTGGTTGCCGAAGAGCCAAAGGAGATGGTaGTGCAGGGGAACGGAATTTGCCTGGAGAAGGTACTCTTTTTGT +
Preference number: 5 (lower is better)
Translates to: VTKCFHWLPKSQRRW*CRGTEFAWRRYSFC
Trigger: ACAAAAAGAGTACCTTCTCCAGGCAAATTCCGTTCCCCTGCAGCACCATCTCCTTTGGCTCTTCGGCAACCAGTGAAAGCATTTAGTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510595.1
ENST00000512093.5
CDS CCA 90 bp ATGGTTACTAAATGCTTTCACTGGTTGCCGAAGAGCCAAAGGAGATaGTGCTGCAGGGGAACGGAATTTGCCTGGAGAAGGTACTCTTTT +
Preference number: 5 (lower is better)
Translates to: MVTKCFHWLPKSQRR*CCRGTEFAWRRYSF
Trigger: AAAAGAGTACCTTCTCCAGGCAAATTCCGTTCCCCTGCAGCACCATCTCCTTTGGCTCTTCGGCAACCAGTGAAAGCATTTAGTAACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510595.1
ENST00000512093.5
CDS-3UTR CAA 90 bp CTTCTGCTGCTTTTCACTGAGTCAACTTGTGTATTAGATGTTCGGGACAGGTTTGGTGGCTGCATATTCTaGCCGGAGACTTTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: LLLLFTESTCVLDVRDRFGGCIF*PETFFL
Trigger: CAGGAAGAAAGTCTCCGGCAAGAATATGCAGCCACC...AAACCTGTCCCGAACATCTAATACACAAGTTGACTCAGTGAAAAGCAGCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505131.1
CDS-3UTR CAA 90 bp CTGAAGCCTGAGGTTGCATACGAGGTATTCCTCCGTTTGGCACTTGAAAATTTGATGTTCGGGACAGGTTaGGAAGACTGCGTCTTAGTT +
Preference number: 5 (lower is better)
Translates to: LKPEVAYEVFLRLALENLMFGTG*EDCVLV
Trigger: AACTAAGACGCAGTCTTCCAAACCTGTCCCGAACAT...CAAATTTTCAAGTGCCAAACGGAGGAATACCTCGTATGCAACCTCAGGCTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505131.1
CDS-3UTR CAA 90 bp CAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCCGACGGTCGAGGTGAATaGCGTGGTGATGGTGAAAAC +
Preference number: 5 (lower is better)
Translates to: QPINLNAVQNIKPSISLSDGRGE*RGDGEN
Trigger: GTTTTCACCATCACCACGCAATTCACCTCGACCGTC...GGAGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp ACTTGTGTATTAGATGTTCGGGACAGGTTTGGAAGACTGCGTCTTAGTTTTTCTGACGGTCGAGGTGAATaGCGTGGTGATGGTGAAAAC +
Preference number: 5 (lower is better)
Translates to: TCVLDVRDRFGRLRLSFSDGRGE*RGDGEN
Trigger: GTTTTCACCATCACCACGCAATTCACCTCGACCGTC...AGAAAAACTAAGACGCAGTCTTCCAAACCTGTCCCGAACATCTAATACACAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505131.1
CDS-3UTR CAA 90 bp CATGTCATAACCATGTTACGGACAGTACTTCAATATTTCCGGATTATGGGATTGGCAAGCCACTTCTCATaGCAGTTGTCCCTGCAGGTC +
Preference number: 5 (lower is better)
Translates to: HVITMLRTVLQYFRIMGLASHFS*QLSLQV
Trigger: GACCTGCAGGGACAACTGCAATGAGAAGTGGCTTGC...CAATCCCATAATCCGGAAATATTGAAGTACTGTCCGTAACATGGTTATGACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR CAA 90 bp CAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCCGCAGGGGAACGGAATTaGCCTGGAGAAGGTACTCTT +
Preference number: 5 (lower is better)
Translates to: QPINLNAVQNIKPSISLSAGERN*PGEGTL
Trigger: AAGAGTACCTTCTCCAGGCAAATTCCGTTCCCCTGC...GGAGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512093.5
CDS-3UTR CAA 90 bp CATGTCATAACCATGTTACGGACAGTACTTCAATATTTCCGGATTATGGGATTGGGTGGCTGCATATTCTaGCCGGAGACTTTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: HVITMLRTVLQYFRIMGLGGCIF*PETFFL
Trigger: CAGGAAGAAAGTCTCCGGCAAGAATATGCAGCCACC...CAATCCCATAATCCGGAAATATTGAAGTACTGTCCGTAACATGGTTATGACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR CAA 90 bp CAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCCGTAGCGCTGTTGATATaGCTGGGAGGATTTGCTGAG +
Preference number: 5 (lower is better)
Translates to: QPINLNAVQNIKPSISLSVALLI*LGGFAE
Trigger: CTCAGCAAATCCTCCCAGCAATATCAACAGCGCTAC...GGAGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp CAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCCCACTTCTCATTGCAGTaGTCCCTGCAGGTCTGGTTA +
Preference number: 5 (lower is better)
Translates to: QPINLNAVQNIKPSISLSHFSLQ*SLQVWL
Trigger: TAACCAGACCTGCAGGGACAACTGCAATGAGAAGTG...GGAGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAAACAGGCTGTGCAAGTTaGCTGCGAGGCACTGGTATG +
Preference number: 5 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKTGCAS*LRGTGM
Trigger: CATACCAGTGCCTCGCAGCAAACTTGCACAGCCTGT...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp GATTTTTCCATCCATACAAGAAAAGATGCACGTGATCACCTAAATATTCGCATTGCAGGGGAACGGAATTaGCCTGGAGAAGGTATGGCT +
Preference number: 5 (lower is better)
Translates to: DFSIHTRKDARDHLNIRIAGERN*PGEGMA
Trigger: AGCCATACCTTCTCCAGGCAAATTCCGTTCCCCTGC...AATGCGAATATTTAGGTGATCACGTGCATCTTTTCTTGTATGGATGGAAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR CAA 90 bp CAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCCAAATGCTTTCACTGGTaGCCGAAGAGCCAAAGGAGA +
Preference number: 5 (lower is better)
Translates to: QPINLNAVQNIKPSISLSKCFHW*PKSQRR
Trigger: TCTCCTTTGGCTCTTCGGCAACCAGTGAAAGCATTT...GGAGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp ATTAAGGAGGCAACCACATATACAAGTTCGGCTATAGAAATGTTTGCAAATCAAGCAAGCCACTTCTCATaGCAGTTGTCCCTGCAGGTC +
Preference number: 5 (lower is better)
Translates to: IKEATTYTSSAIEMFANQASHFS*QLSLQV
Trigger: GACCTGCAGGGACAACTGCAATGAGAAGTGGCTTGC...TTGATTTGCAAACATTTCTATAGCCGAACTTGTATATGTGGTTGCCTCCTTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp TGTATCAAGAATAAAGACACACACTACTTGTTCTTTCCTATCATGAAAACCTGCACAGGCTGTGCAAGTTaGCTGCGAGGCACTGGTATG +
Preference number: 5 (lower is better)
Translates to: CIKNKDTHYLFFPIMKTCTGCAS*LRGTGM
Trigger: CATACCAGTGCCTCGCAGCAAACTTGCACAGCCTGT...GCAGGTTTTCATGATAGGAAAGAACAAGTAGTGTGTGTCTTTATTCTTGATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp CAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCCGCATCCATTAGGTATTaGCCCAGATATTGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: QPINLNAVQNIKPSISLSASIRY*PRYWPL
Trigger: CAGAGGCCAATATCTGGGCAAATACCTAATGGATGC...GGAGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp CAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCCCAGCATGTGAAGAAGTaGGCTTCAATAGCAAAGGCC +
Preference number: 5 (lower is better)
Translates to: QPINLNAVQNIKPSISLSQHVKK*ASIAKA
Trigger: GGCCTTTGCTATTGAAGCCAACTTCTTCACATGCTG...GGAGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp ATCAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTATGGGCTACTGGCATTaGGACTGTAAGGACTGGTGT +
Preference number: 5 (lower is better)
Translates to: INLSTLMLSRISSLLFLSMGYWH*DCKDWC
Trigger: ACACCAGTCCTTACAGTCCAAATGCCAGTAGCCCAT...AGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp ATTAAGGAGGCAACCACATATACAAGTTCGGCTATAGAAATGTTTGCAAATCAAGGTGGCTGCATATTCTaGCCGGAGACTTTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: IKEATTYTSSAIEMFANQGGCIF*PETFFL
Trigger: CAGGAAGAAAGTCTCCGGCAAGAATATGCAGCCACC...TTGATTTGCAAACATTTCTATAGCCGAACTTGTATATGTGGTTGCCTCCTTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAAGTAGCGCTGTTGATATaGCTGGGAGGATTTGCTGAG +
Preference number: 5 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKVALLI*LGGFAE
Trigger: CTCAGCAAATCCTCCCAGCAATATCAACAGCGCTAC...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp ATTAAGGAGGCAACCACATATACAAGTTCGGCTATAGAAATGTTTGCAAATCAAATGGGCTACTGGCATTaGGACTGTAAGGACTGGTGT +
Preference number: 5 (lower is better)
Translates to: IKEATTYTSSAIEMFANQMGYWH*DCKDWC
Trigger: ACACCAGTCCTTACAGTCCAAATGCCAGTAGCCCAT...TTGATTTGCAAACATTTCTATAGCCGAACTTGTATATGTGGTTGCCTCCTTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp ATCAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCCCCGTCTTGTAGAATaGCAAGATGAACCAGAACTG +
Preference number: 5 (lower is better)
Translates to: INLSTLMLSRISSLLFLSPRLVE*QDEPEL
Trigger: CAGTTCTGGTTCATCTTGCAATTCTACAAGACGGGG...AGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAACCCCGTCTTGTAGAATaGCAAGATGAACCAGAACTG +
Preference number: 5 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKPRLVE*QDEPEL
Trigger: CAGTTCTGGTTCATCTTGCAATTCTACAAGACGGGG...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp CAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCCGAGGTATTCCTCCGTTaGGCACTTGAAAATTTGAGT +
Preference number: 5 (lower is better)
Translates to: QPINLNAVQNIKPSISLSEVFLR*ALENLS
Trigger: ACTCAAATTTTCAAGTGCCAAACGGAGGAATACCTC...GGAGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp ACTTGTGTATTAGATGTTCGGGACAGGTTTGGAAGACTGCGTCTTAGTTTTTCTGAGGTATTCCTCCGTTaGGCACTTGAAAATTTGAGT +
Preference number: 5 (lower is better)
Translates to: TCVLDVRDRFGRLRLSFSEVFLR*ALENLS
Trigger: ACTCAAATTTTCAAGTGCCAAACGGAGGAATACCTC...AGAAAAACTAAGACGCAGTCTTCCAAACCTGTCCCGAACATCTAATACACAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505131.1
CDS-3UTR CAA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAAAAATGCTTTCACTGGTaGCCGAAGAGCCAAAGGAGA +
Preference number: 5 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKKCFHW*PKSQRR
Trigger: TCTCCTTTGGCTCTTCGGCAACCAGTGAAAGCATTT...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAATATTGCTGGGAGGATTaGCTGAGACTGTGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKYCWED*LRLCSE
Trigger: TTCAGAGCACAGTCTCAGCAAATCCTCCCAGCAATA...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGCACTTCTCATTGCAGTaGTCCCTGCAGGTCTGGTTA +
Preference number: 5 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLHFSLQ*SLQVWL
Trigger: TAACCAGACCTGCAGGGACAACTGCAATGAGAAGTG...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp ATCAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTGCATCCATTAGGTATTaGCCCAGATATTGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: INLSTLMLSRISSLLFLSASIRY*PRYWPL
Trigger: CAGAGGCCAATATCTGGGCAAATACCTAATGGATGC...AGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp ATCAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTTCTCATGGTATGGTTTaGTTCCAGGTTGCAAGCACC +
Preference number: 5 (lower is better)
Translates to: INLSTLMLSRISSLLFLSSHGMV*FQVAST
Trigger: GGTGCTTGCAACCTGGAACAAAACCATACCATGAGA...AGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp CAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCCCTCTCCCAATTTCTTTaGCCAACTTACGGAATGTCT +
Preference number: 5 (lower is better)
Translates to: QPINLNAVQNIKPSISLSLSQFL*PTYGMS
Trigger: AGACATTCCGTAAGTTGGCAAAAGAAATTGGGAGAG...GGAGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp ATCAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTGGAAGTATAAGCTGTTaGACTATAGGAGGTCGCACT +
Preference number: 5 (lower is better)
Translates to: INLSTLMLSRISSLLFLSGSISC*TIGGRT
Trigger: AGTGCGACCTCCTATAGTCAAACAGCTTATACTTCC...AGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp GATTTTTCCATCCATACAAGAAAAGATGCACGTGATCACCTAAATATTCGCATTATGTTCGGGACAGGTTaGGAAGACTGCGTCTTAGTT +
Preference number: 5 (lower is better)
Translates to: DFSIHTRKDARDHLNIRIMFGTG*EDCVLV
Trigger: AACTAAGACGCAGTCTTCCAAACCTGTCCCGAACAT...AATGCGAATATTTAGGTGATCACGTGCATCTTTTCTTGTATGGATGGAAAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR CAA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGATGTTCGGGACAGGTTaGGAAGACTGCGTCTTAGTT +
Preference number: 5 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLMFGTG*EDCVLV
Trigger: AACTAAGACGCAGTCTTCCAAACCTGTCCCGAACAT...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGGAGCTGTGTTATTTCTaGGCTACCAGGAGAACCAGA +
Preference number: 5 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLELCYF*ATRRTR
Trigger: TCTGGTTCTCCTGGTAGCCAAGAAATAACACAGCTC...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp TGTATCAAGAATAAAGACACACACTACTTGTTCTTTCCTATCATGAAAACCTGCGAGCTGTGTTATTTCTaGGCTACCAGGAGAACCAGA +
Preference number: 5 (lower is better)
Translates to: CIKNKDTHYLFFPIMKTCELCYF*ATRRTR
Trigger: TCTGGTTCTCCTGGTAGCCAAGAAATAACACAGCTC...GCAGGTTTTCATGATAGGAAAGAACAAGTAGTGTGTGTCTTTATTCTTGATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp TGTATCAAGAATAAAGACACACACTACTTGTTCTTTCCTATCATGAAAACCTGCTATTGCTGGGAGGATTaGCTGAGACTGTGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: CIKNKDTHYLFFPIMKTCYCWED*LRLCSE
Trigger: TTCAGAGCACAGTCTCAGCAAATCCTCCCAGCAATA...GCAGGTTTTCATGATAGGAAAGAACAAGTAGTGTGTGTCTTTATTCTTGATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp ATCAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTGTTAGAGTAGCGCTGTaGATATTGCTGGGAGGATTT +
Preference number: 5 (lower is better)
Translates to: INLSTLMLSRISSLLFLSVRVAL*ILLGGF
Trigger: AAATCCTCCCAGCAATATCAACAGCGCTACTCTAAC...AGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAAGTTAGAGTAGCGCTGTaGATATTGCTGGGAGGATTT +
Preference number: 5 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKVRVAL*ILLGGF
Trigger: AAATCCTCCCAGCAATATCAACAGCGCTACTCTAAC...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp ATTAAGGAGGCAACCACATATACAAGTTCGGCTATAGAAATGTTTGCAAATCAATCTCATGGTATGGTTTaGTTCCAGGTTGCAAGCACC +
Preference number: 5 (lower is better)
Translates to: IKEATTYTSSAIEMFANQSHGMV*FQVAST
Trigger: GGTGCTTGCAACCTGGAACAAAACCATACCATGAGA...TTGATTTGCAAACATTTCTATAGCCGAACTTGTATATGTGGTTGCCTCCTTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp GATTTTTCCATCCATACAAGAAAAGATGCACGTGATCACCTAAATATTCGCATTACTCAACATCAGGACTaGGGTAATCCAAAACTTGCC +
Preference number: 5 (lower is better)
Translates to: DFSIHTRKDARDHLNIRITQHQD*GNPKLA
Trigger: GGCAAGTTTTGGATTACCCAAGTCCTGATGTTGAGT...AATGCGAATATTTAGGTGATCACGTGCATCTTTTCTTGTATGGATGGAAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR CAA 90 bp ATTAAGGAGGCAACCACATATACAAGTTCGGCTATAGAAATGTTTGCAAATCAAGGAAGTATAAGCTGTTaGACTATAGGAGGTCGCACT +
Preference number: 5 (lower is better)
Translates to: IKEATTYTSSAIEMFANQGSISC*TIGGRT
Trigger: AGTGCGACCTCCTATAGTCAAACAGCTTATACTTCC...TTGATTTGCAAACATTTCTATAGCCGAACTTGTATATGTGGTTGCCTCCTTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp TGTATCAAGAATAAAGACACACACTACTTGTTCTTTCCTATCATGAAAACCTGCTCTGCATTCTTGTCTTaGCTGGTCAGTAACAGCCAT +
Preference number: 5 (lower is better)
Translates to: CIKNKDTHYLFFPIMKTCSAFLS*LVSNSH
Trigger: ATGGCTGTTACTGACCAGCAAAGACAAGAATGCAGA...GCAGGTTTTCATGATAGGAAAGAACAAGTAGTGTGTGTCTTTATTCTTGATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGTCTGCATTCTTGTCTTaGCTGGTCAGTAACAGCCAT +
Preference number: 5 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLSAFLS*LVSNSH
Trigger: ATGGCTGTTACTGACCAGCAAAGACAAGAATGCAGA...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp GATTTTTCCATCCATACAAGAAAAGATGCACGTGATCACCTAAATATTCGCATTTGGACTTCTGCATTCTaGTCTTTGCTGGTCAGTAAC +
Preference number: 5 (lower is better)
Translates to: DFSIHTRKDARDHLNIRIWTSAF*SLLVSN
Trigger: GTTACTGACCAGCAAAGACAAGAATGCAGAAGTCCA...AATGCGAATATTTAGGTGATCACGTGCATCTTTTCTTGTATGGATGGAAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR CAA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGTGGACTTCTGCATTCTaGTCTTTGCTGGTCAGTAAC +
Preference number: 5 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLWTSAF*SLLVSN
Trigger: GTTACTGACCAGCAAAGACAAGAATGCAGAAGTCCA...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp CATGTCATAACCATGTTACGGACAGTACTTCAATATTTCCGGATTATGGGATTGAATGGGCATTTCTCTTaGGCATCCATTAGGTATTTG +
Preference number: 5 (lower is better)
Translates to: HVITMLRTVLQYFRIMGLNGHFS*ASIRYL
Trigger: CAAATACCTAATGGATGCCAAAGAGAAATGCCCATT...CAATCCCATAATCCGGAAATATTGAAGTACTGTCCGTAACATGGTTATGACATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR CAA 90 bp CATGTCATAACCATGTTACGGACAGTACTTCAATATTTCCGGATTATGGGATTGCAAACACACACAAGTTaGATGTGTCAATGCAACATG +
Preference number: 5 (lower is better)
Translates to: HVITMLRTVLQYFRIMGLQTHTS*MCQCNM
Trigger: CATGTTGCATTGACACATCAAACTTGTGTGTGTTTG...CAATCCCATAATCCGGAAATATTGAAGTACTGTCCGTAACATGGTTATGACATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR CAA 90 bp CAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTCCAAAATACATCAGTGGTaGAACCTCCATATGGGTTTT +
Preference number: 5 (lower is better)
Translates to: QPINLNAVQNIKPSISLSKIHQW*NLHMGF
Trigger: AAAACCCATATGGAGGTTCAACCACTGATGTATTTT...GGAGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS-3UTR CAA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGGAGGTATTCCTCCGTTaGGCACTTGAAAATTTGAGT +
Preference number: 5 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLEVFLR*ALENLS
Trigger: ACTCAAATTTTCAAGTGCCAAACGGAGGAATACCTC...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp ATCAACCTATCAACCTTAATGCTGTCCAGAATATCAAGCCTTCTATTTCTCTCTAATGGGCATTTCTCTTaGGCATCCATTAGGTATTTG +
Preference number: 5 (lower is better)
Translates to: INLSTLMLSRISSLLFLSNGHFS*ASIRYL
Trigger: CAAATACCTAATGGATGCCAAAGAGAAATGCCCATT...AGAGAGAAATAGAAGGCTTGATATTCTGGACAGCATTAAGGTTGATAGGTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp ATTTTCCTACCACATAATAGACCGTTATGCCATGTAATAGCAACAATACAACTGTCATTAAAGTGCTGTTaGATGATCTCTGTCGGTTTG +
Preference number: 5 (lower is better)
Translates to: IFLPHNRPLCHVIATIQLSLKCC*MISVGL
Trigger: CAAACCGACAGAGATCATCAAACAGCACTTTAATGA...CAGTTGTATTGTTGCTATTACATGGCATAACGGTCTATTATGTGGTAGGAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAAGTATTTGCCCAGATATaGGCCTCTGTCAAATATTTT +
Preference number: 5 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKVFAQI*ASVKYF
Trigger: AAAATATTTGACAGAGGCCAATATCTGGGCAAATAC...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp GACCTTAAAGGACCATGCTTAACGTCAAAAATGGACACCTGTACATTCAATAAAGAATTCACCATTTTCTaGTGCACAAATGGGCATTTT +
Preference number: 5 (lower is better)
Translates to: DLKGPCLTSKMDTCTFNKEFTIF*CTNGHF
Trigger: AAAATGCCCATTTGTGCACAAGAAAATGGTGAATTC...TTTATTGAATGTACAGGTGTCCATTTTTGACGTTAAGCATGGTCCTTTAAGGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS CCA 90 bp TCCGGGCTAGAATCTGTACATCAGTTACATCATTTAGCTTATAATTaGATCCAATTGAATCTTCATCTAATTCTGAAGCACTTAACTCAC +
Preference number: 5 (lower is better)
Translates to: SGLESVHQLHHLAYN*IQLNLHLILKHLTH
Trigger: GTGAGTTAAGTGCTTCAGAATTAGATGAAGATTCAATTGGATCCAATTATAAGCTAAATGATGTAACTGATGTACAGATTCTAGCCCGGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS-3UTR CAA 90 bp ATTAAGGAGGCAACCACATATACAAGTTCGGCTATAGAAATGTTTGCAAATCAAGTATTTGCCCAGATATaGGCCTCTGTCAAATATTTT +
Preference number: 5 (lower is better)
Translates to: IKEATTYTSSAIEMFANQVFAQI*ASVKYF
Trigger: AAAATATTTGACAGAGGCCAATATCTGGGCAAATAC...TTGATTTGCAAACATTTCTATAGCCGAACTTGTATATGTGGTTGCCTCCTTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS CCA 72 bp CCTGCGAACAGGCTGTGCAAGTTTGCTGCGAGGCACTaGTATGCCCCCAGCAGAAGGGGCACTGGGTCTGGG +
Preference number: 6 (lower is better)
Translates to: PANRLCKFAARH*YAPSRRGTGSG
Trigger: CCCAGACCCAGTGCCCCTTCTGCTGGGGGCATACCAGTGCCTCGCAGCAAACTTGCACAGCCTGTTCGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510595.1
CDS GCA 72 bp GAACAGGCTGTGCAAGTTTGCTGCGAGGCACTGGTATaGCCCCAGCAGAAGGGGCACTGGGTCTGGGCAAGC +
Preference number: 6 (lower is better)
Translates to: EQAVQVCCEALV*PQQKGHWVWAS
Trigger: GCTTGCCCAGACCCAGTGCCCCTTCTGCTGGGGGCATACCAGTGCCTCGCAGCAAACTTGCACAGCCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264313.11
ENST00000510595.1
ENST00000512093.5
CDS CCA 72 bp TCTGCGAACAGGCTGTGCAAGTTTGCTGCGAGGCACTaGTATGCCCCCAGCAGAAGGGGCACTGGGTCTGGG +
Preference number: 6 (lower is better)
Translates to: SANRLCKFAARH*YAPSRRGTGSG
Trigger: CCCAGACCCAGTGCCCCTTCTGCTGGGGGCATACCAGTGCCTCGCAGCAAACTTGCACAGCCTGTTCGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS CAA 72 bp GGAGCTGGCAAGGATCTGCGAACAGGCTGTGCAAGTTaGCTGCGAGGCACTGGTATGCCCCCAGCAGAAGGG +
Preference number: 6 (lower is better)
Translates to: GAGKDLRTGCAS*LRGTGMPPAEG
Trigger: CCCTTCTGCTGGGGGCATACCAGTGCCTCGCAGCAAACTTGCACAGCCTGTTCGCAGATCCTTGCCAGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS CAA 72 bp ACATCTGCCACTTACCTGCGAACAGGCTGTGCAAGTTaGCTGCGAGGCACTGGTATGCCCCCAGCAGAAGGG +
Preference number: 6 (lower is better)
Translates to: TSATYLRTGCAS*LRGTGMPPAEG
Trigger: CCCTTCTGCTGGGGGCATACCAGTGCCTCGCAGCAAACTTGCACAGCCTGTTCGCAGGTAAGTGGCAGATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510595.1
CDS GCA 72 bp AAACAGAACATCTGCCACTTACCTGCGAACAGGCTGTaGAAGTTTGCTGCGAGGCACTGGTATGCCCCCAGC +
Preference number: 6 (lower is better)
Translates to: KQNICHLPANRL*KFAARHWYAPS
Trigger: GCTGGGGGCATACCAGTGCCTCGCAGCAAACTTGCACAGCCTGTTCGCAGGTAAGTGGCAGATGTTCTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510595.1
CDS GCA 72 bp TTTCACTGGTTGCCGAAGAGCCAAAGGAGATGGTGCTaGAGGGGAACGGAATTTGCCTGGAGAAGGTATGGC +
Preference number: 6 (lower is better)
Translates to: FHWLPKSQRRWC*RGTEFAWRRYG
Trigger: GCCATACCTTCTCCAGGCAAATTCCGTTCCCCTGCAGCACCATCTCCTTTGGCTCTTCGGCAACCAGTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264313.11
CDS GCA 72 bp TTTCACTGGTTGCCGAAGAGCCAAAGGAGATGGTGCTaGAGGGGAACGGAATTTGCCTGGAGAAGGTACTCT +
Preference number: 6 (lower is better)
Translates to: FHWLPKSQRRWC*RGTEFAWRRYS
Trigger: AGAGTACCTTCTCCAGGCAAATTCCGTTCCCCTGCAGCACCATCTCCTTTGGCTCTTCGGCAACCAGTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510595.1
ENST00000512093.5
CDS CCA 72 bp AAATGCTTTCACTGGTTGCCGAAGAGCCAAAGGAGATaGTGCTGCAGGGGAACGGAATTTGCCTGGAGAAGG +
Preference number: 6 (lower is better)
Translates to: KCFHWLPKSQRR*CCRGTEFAWRR
Trigger: CCTTCTCCAGGCAAATTCCGTTCCCCTGCAGCACCATCTCCTTTGGCTCTTCGGCAACCAGTGAAAGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264313.11
ENST00000510595.1
ENST00000512093.5
CDS TCA 72 bp GTGATGGTGAAAACCCCGTCTTGTAGAATTGCAAGATaGACCAGAACTGCGCCGAGACGTGGTGGCTGCATA +
Preference number: 6 (lower is better)
Translates to: VMVKTPSCRIAR*TRTAPRRGGCI
Trigger: TATGCAGCCACCACGTCTCGGCGCAGTTCTGGTTCATCTTGCAATTCTACAAGACGGGGTTTTCACCATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505131.1
CDS GCA 72 bp GAACCAGAGCCATGGTTACTAAATGCTTTCACTGGTTaGCGAAGAGCCAAAGGAGATGGTGCTGCAGGGGAA +
Preference number: 6 (lower is better)
Translates to: EPEPWLLNAFTG*RRAKGDGAAGE
Trigger: TTCCCCTGCAGCACCATCTCCTTTGGCTCTTCGGCAACCAGTGAAAGCATTTAGTAACCATGGCTCTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264313.11
ENST00000510595.1
ENST00000512093.5
CDS GCA 72 bp CTCAAGAATGCTGAAACAGAACATCTGCCACTTACCTaGGAACAGGCTGTGCAAGTTTGCTGCGAGGCACTG +
Preference number: 6 (lower is better)
Translates to: LKNAETEHLPLT*EQAVQVCCEAL
Trigger: CAGTGCCTCGCAGCAAACTTGCACAGCCTGTTCGCAGGTAAGTGGCAGATGTTCTGTTTCAGCATTCTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510595.1
CDS CCA 72 bp AATTGCAAGATGAACCAGAACTGCGCCGAGACGTGGTaGCTGCATATTCTTGCCGGAGACTTTCTTCCTGCA +
Preference number: 6 (lower is better)
Translates to: NCKMNQNCAETW*LHILAGDFLPA
Trigger: TGCAGGAAGAAAGTCTCCGGCAAGAATATGCAGCCACCACGTCTCGGCGCAGTTCTGGTTCATCTTGCAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264313.11
ENST00000505131.1
ENST00000512093.5
CDS CCA 72 bp AGGAGAACCAGAGCCATGGTTACTAAATGCTTTCACTaGTTGCCGAAGAGCCAAAGGAGATGGTGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: RRTRAMVTKCFH*LPKSQRRWCCR
Trigger: CCTGCAGCACCATCTCCTTTGGCTCTTCGGCAACCAGTGAAAGCATTTAGTAACCATGGCTCTGGTTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264313.11
ENST00000510595.1
ENST00000512093.5
CDS CAA 72 bp TTTCTGGGTGACTGCTTAGGTGACGGTCGAGGTGAATaGCGTGGTGATGGTGAAAACCTGTTAACAGCAGGG +
Preference number: 6 (lower is better)
Translates to: FLGDCLGDGRGE*RGDGENLLTAG
Trigger: CCCTGCTGTTAACAGGTTTTCACCATCACCACGCAATTCACCTCGACCGTCACCTAAGCAGTCACCCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS TCA 72 bp ATCACTAAAAGTACCCCGTCTTGTAGAATTGCAAGATaGACCAGAACTGCGCCGAGACGTGGTGGCTGCATA +
Preference number: 6 (lower is better)
Translates to: ITKSTPSCRIAR*TRTAPRRGGCI
Trigger: TATGCAGCCACCACGTCTCGGCGCAGTTCTGGTTCATCTTGCAATTCTACAAGACGGGGTACTTTTAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264313.11
ENST00000512093.5
CDS GCA 72 bp ACTTTCAGGCACTCAAGAATGCTGAAACAGAACATCTaGCACTTACCTGCGAACAGGCTGTGCAAGTTTGCT +
Preference number: 6 (lower is better)
Translates to: TFRHSRMLKQNI*HLPANRLCKFA
Trigger: AGCAAACTTGCACAGCCTGTTCGCAGGTAAGTGGCAGATGTTCTGTTTCAGCATTCTTGAGTGCCTGAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510595.1
CDS CCA 72 bp GGTGAGGAGGTGGTTTGTGTGAGCTGTGTTATTTCTTaGCTACCAGGAGAACCAGAGCCATGGTTACTAAAT +
Preference number: 6 (lower is better)
Translates to: GEEVVCVSCVIS*LPGEPEPWLLN
Trigger: ATTTAGTAACCATGGCTCTGGTTCTCCTGGTAGCCAAGAAATAACACAGCTCACACAAACCACCTCCTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264313.11
ENST00000510595.1
ENST00000512093.5
CDS CAA 72 bp AGAGCCAAAGGAGATGGTGCTGCAGGGGAACGGAATTaGCCTGGAGAAGGTACTCTTTTTGTAGATGAAGTT +
Preference number: 6 (lower is better)
Translates to: RAKGDGAAGERN*PGEGTLFVDEV
Trigger: AACTTCATCTACAAAAAGAGTACCTTCTCCAGGCAAATTCCGTTCCCCTGCAGCACCATCTCCTTTGGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510595.1
ENST00000512093.5
CDS CCA 72 bp AGAATTGAAGCCACTGCTGTATGGGCTACTGGCATTTaGACTGTAAGGACTGGTGTAACTCATAGAGTTGAA +
Preference number: 6 (lower is better)
Translates to: RIEATAVWATGI*TVRTGVTHRVE
Trigger: TTCAACTCTATGAGTTACACCAGTCCTTACAGTCCAAATGCCAGTAGCCCATACAGCAGTGGCTTCAATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264313.11
ENST00000506375.1
ENST00000512093.5
CDS CAA 72 bp TTCAAGTTACCTGAATTTCCAGGAAGTATAAGCTGTTaGACTATAGGAGGTCGCACTGGGGTTGAGGATGGA +
Preference number: 6 (lower is better)
Translates to: FKLPEFPGSISC*TIGGRTGVEDG
Trigger: TCCATCCTCAACCCCAGTGCGACCTCCTATAGTCAAACAGCTTATACTTCCTGGAAATTCAGGTAACTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264313.11
ENST00000506375.1
ENST00000512093.5