RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLA2 (Homo sapiens)

Ensembl gene IDs: ENSG00000101082

Ensembl transcript IDs: ENST00000262866.9, ENST00000360672.2

Found 310 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTGTGGAGAGAGGGCTTAGCACCTTCTGATGCCCCTGCCCAGCACTaGGGTGCCTGGCCTCACTGCAGTGTGCTAGACTTAAGAGGTGTT +
Preference number: 1 (lower is better)
Translates to: LWREGLAPSDAPAQH*GAWPHCSVLDLRGV
Trigger: AACACCTCTTAAGTCTAGCACACTGCAGTGAGGCCAGGCACCTCAGTGCTGGGCAGGGGCATCAGAAGGTGCTAAGCCCTCTCTCCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR TCA 90 bp GCACTAGAGGTCGCAGGTGGGATCATGGCACTGGAAGGAAGTAGGTaGCTTCTAAGGGCTAAGAGAGGAAAGAGCAAGGGTACAGGTGGG +
Preference number: 1 (lower is better)
Translates to: ALEVAGGIMALEGSR*LLRAKRGKSKGTGG
Trigger: CCCACCTGTACCCTTGCTCTTTCCTCTCTTAGCCCTTAGAAGTCACCTACTTCCTTCCAGTGCCATGATCCCACCTGCGACCTCTAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR CCA 90 bp CCTCTTTCTGTTTATGGAGGCAGCAGGGAAATCAAGGGCTGGATTTaGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGAGAGAGGGCT +
Preference number: 1 (lower is better)
Translates to: PLSVYGGSREIKGWI*CRLWSPSWHCGERA
Trigger: AGCCCTCTCTCCACAATGCCAAGACGGAGACCACAGCCTACACCAAATCCAGCCCTTGATTTCCCTGCTGCCTCCATAAACAGAAAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR CCA 90 bp GGGACATTTGAGGACCTAGACTGTCCGAAGTCTTTCTCTTTGCTCTaGAGGTCACATAGAGCCTGGACCATCCAAGATCTGCTGCTACGG +
Preference number: 1 (lower is better)
Translates to: GTFEDLDCPKSFSLL*RSHRAWTIQDLLLR
Trigger: CCGTAGCAGCAGATCTTGGATGGTCCAGGCTCTATGTGACCTCCAGAGCAAAGAGAAAGACTTCGGACAGTCTAGGTCCTCAAATGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR CCA 90 bp AGCAGACCTCTTTCTGTTTATGGAGGCAGCAGGGAAATCAAGGGCTaGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGAGAG +
Preference number: 1 (lower is better)
Translates to: SRPLSVYGGSREIKG*IWCRLWSPSWHCGE
Trigger: CTCTCCACAATGCCAAGACGGAGACCACAGCCTACACCAAATCCAGCCCTTGATTTCCCTGCTGCCTCCATAAACAGAAAGAGGTCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR TCA 90 bp ATCATCTCAGCTTTCCTTTCCCTTCTAGGCCACAGTCCTACCTTCTaGGGTATGGTGGTGGTCTCAACGAGACTTGTAGATTTTCTGAAA +
Preference number: 1 (lower is better)
Translates to: IISAFLSLLGHSPTF*GMVVVSTRLVDFLK
Trigger: TTTCAGAAAATCTACAAGTCTCGTTGAGACCACCACCATACCTCAGAAGGTAGGACTGTGGCCTAGAAGGGAAAGGAAAGCTGAGATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR TCA 90 bp GGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGAGAGAGGGCTTAGCACCTTCGCCCCTGCCCAGCACTaGGGTGCCTGGCCTCACTGC +
Preference number: 2 (lower is better)
Translates to: GVGCGLRLGIVERGLSTFAPAQH*GAWPHC
Trigger: GCAGTGAGGCCAGGCACCTCAGTGCTGGGCAGGGGC...GAAGGTGCTAAGCCCTCTCTCCACAATGCCAAGACGGAGACCACAGCCTACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR CCA 90 bp GGCCCTGGTCCCACCTTCTCTGCACTCGCACTAGAGGTCGCAGGTGGGATCATGGAGCAAGGGTACAGGTaGGACCCTAGATGCACCTCT +
Preference number: 2 (lower is better)
Translates to: GPGPTFSALALEVAGGIMEQGYR*DPRCTS
Trigger: AGAGGTGCATCTAGGGTCCCACCTGTACCCTTGCTC...CATGATCCCACCTGCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCAGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR CCA 90 bp TGTAGCTTGGGAACCAGTAGGAGCACTGGAGGGGGTGCCTCCCACCCCATCCCTCATTGCACTCCAGCATaGGCAACAGGGCAAGACTCC +
Preference number: 2 (lower is better)
Translates to: CSLGTSRSTGGGASHPIPHCTPA*ATGQDS
Trigger: GGAGTCTTGCCCTGTTGCCCATGCTGGAGTGCAATG...AGGGATGGGGTGGGAGGCACCCCCTCCAGTGCTCCTACTGGTTCCCAAGCTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR TCA 90 bp TGTAGCTTGGGAACCAGTAGGAGCACTGGAGGGGGTGCCTCCCACCCCATCCCTAGATGGAGGTTGCAGTaGGCTGAGATCGTGCCATTG +
Preference number: 2 (lower is better)
Translates to: CSLGTSRSTGGGASHPIPRWRLQ*AEIVPL
Trigger: CAATGGCACGATCTCAGCTCACTGCAACCTCCATCT...AGGGATGGGGTGGGAGGCACCCCCTCCAGTGCTCCTACTGGTTCCCAAGCTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR CCA 90 bp GGGGTGCCCAGGAGGCTGAATTGGGGTTCTAGGTGTGCAGCCTTGGTTTCCCTTCCCAGGAGGCTGAATTaGGGTTCTAGGTGTGCAGCC +
Preference number: 2 (lower is better)
Translates to: GVPRRLNWGSRCAALVSLPRRLN*GSRCAA
Trigger: GGCTGCACACCTAGAACCCCAATTCAGCCTCCTGGG...AAGGGAAACCAAGGCTGCACACCTAGAACCCCAATTCAGCCTCCTGGGCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR TCA 90 bp GTTAATGGTGGGGATGTAGAATGGGGCTCAACAGGCAGGGCATCCAGATGGTACCCCGGAGACCCTCACTaGGAAGAGACTCCTCCCCTG +
Preference number: 2 (lower is better)
Translates to: VNGGDVEWGSTGRASRWYPGDPH*EETPPL
Trigger: CAGGGGAGGAGTCTCTTCTCAGTGAGGGTCTCCGGG...GTACCATCTGGATGCCCTGCCTGTTGAGCCCCATTCTACATCCCCACCATTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000360672.2
3UTR-3UTR GCA 90 bp GGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGAGAGAGGGCTTAGCACCTTCAGGTGGGACCCTAGATaGACCTCTGTGTCCCACCCT +
Preference number: 2 (lower is better)
Translates to: GVGCGLRLGIVERGLSTFRWDPR*TSVSHP
Trigger: AGGGTGGGACACAGAGGTGCATCTAGGGTCCCACCT...GAAGGTGCTAAGCCCTCTCTCCACAATGCCAAGACGGAGACCACAGCCTACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR CCA 90 bp GGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGAGAGAGGGCTTAGCACCTTCCCCAGGAGGCTGAATTaGGGTTCTAGGTGTGCAGCC +
Preference number: 2 (lower is better)
Translates to: GVGCGLRLGIVERGLSTFPRRLN*GSRCAA
Trigger: GGCTGCACACCTAGAACCCCAATTCAGCCTCCTGGG...GAAGGTGCTAAGCCCTCTCTCCACAATGCCAAGACGGAGACCACAGCCTACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR CCA 90 bp GGCCCTGGTCCCACCTTCTCTGCACTCGCACTAGAGGTCGCAGGTGGGATCATGGTGGGATCATGGCACTaGAAGGAAGTAGGTGACTTC +
Preference number: 2 (lower is better)
Translates to: GPGPTFSALALEVAGGIMVGSWH*KEVGDF
Trigger: GAAGTCACCTACTTCCTTCCAGTGCCATGATCCCAC...CATGATCCCACCTGCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR GCA 90 bp GGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGAGAGAGGGCTTAGCAGGTGGGACCCTAGATaGACCTCTGTGTCCCACCCT +
Preference number: 2 (lower is better)
Translates to: GFGVGCGLRLGIVERGLSRWDPR*TSVSHP
Trigger: AGGGTGGGACACAGAGGTGCATCTAGGGTCCCACCT...GCTAAGCCCTCTCTCCACAATGCCAAGACGGAGACCACAGCCTACACCAAATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR CCA 90 bp TTTTTGGAACCCTGGCCCTGGTCCCACCTTCTCTGCACTCGCACTAGAGGTCGCCTAGGTGTGCAGCCTTaGTTTCCCTTTTGGCCTCTC +
Preference number: 2 (lower is better)
Translates to: FLEPWPWSHLLCTRTRGRLGVQP*FPFWPL
Trigger: GAGAGGCCAAAAGGGAAACCAAGGCTGCACACCTAG...GCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCAGGGCCAGGGTTCCAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR CCA 90 bp GGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGAGAGAGGGCTTAGCACCTTCCATTGCACTCCAGCATaGGCAACAGGGCAAGACTCC +
Preference number: 2 (lower is better)
Translates to: GVGCGLRLGIVERGLSTFHCTPA*ATGQDS
Trigger: GGAGTCTTGCCCTGTTGCCCATGCTGGAGTGCAATG...GAAGGTGCTAAGCCCTCTCTCCACAATGCCAAGACGGAGACCACAGCCTACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR CCA 90 bp TGTAGCTTGGGAACCAGTAGGAGCACTGGAGGGGGTGCCTCCCACCCCATCCCTATTTGGTGTAGGCTGTaGTCTCCGTCTTGGCATTGT +
Preference number: 2 (lower is better)
Translates to: CSLGTSRSTGGGASHPIPIWCRL*SPSWHC
Trigger: ACAATGCCAAGACGGAGACCACAGCCTACACCAAAT...AGGGATGGGGTGGGAGGCACCCCCTCCAGTGCTCCTACTGGTTCCCAAGCTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR CCA 90 bp AGAGGAAAGAGCAAGGGTACAGGTGGGACCCTAGATGCACCTCTGTGTCCCACCCTAGGTGTGCAGCCTTaGTTTCCCTTTTGGCCTCTC +
Preference number: 2 (lower is better)
Translates to: RGKSKGTGGTLDAPLCPTLGVQP*FPFWPL
Trigger: GAGAGGCCAAAAGGGAAACCAAGGCTGCACACCTAG...GGTGGGACACAGAGGTGCATCTAGGGTCCCACCTGTACCCTTGCTCTTTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR CCA 90 bp GGCAGCAGGGAAATCAAGGGCTGGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGGGCTTATTCTCTTTTTaGAACCCTGGCCCTGGTCCC +
Preference number: 2 (lower is better)
Translates to: GSREIKGWIWCRLWSPSWGLFSF*NPGPGP
Trigger: GGGACCAGGGCCAGGGTTCCAAAAAGAGAATAAGCC...CCAAGACGGAGACCACAGCCTACACCAAATCCAGCCCTTGATTTCCCTGCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR CCA 90 bp GGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGAGAGAGGGCTTAGCACCTTCGGCAGGGCATCCAGATaGTACTGGAAACCCCAAACT +
Preference number: 2 (lower is better)
Translates to: GVGCGLRLGIVERGLSTFGRASR*YWKPQT
Trigger: AGTTTGGGGTTTCCAGTACCATCTGGATGCCCTGCC...GAAGGTGCTAAGCCCTCTCTCCACAATGCCAAGACGGAGACCACAGCCTACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR CCA 90 bp GGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGAGAGAGGGCTTAGCACCTTCTTTCTACCTTGTGGGTaGGGCCTGGTTAATGGTGGG +
Preference number: 2 (lower is better)
Translates to: GVGCGLRLGIVERGLSTFFLPCG*GLVNGG
Trigger: CCCACCATTAACCAGGCCCCACCCACAAGGTAGAAA...GAAGGTGCTAAGCCCTCTCTCCACAATGCCAAGACGGAGACCACAGCCTACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR CAA 90 bp TGGGGTTCTAGGTGTGCAGCCTTGGTTTCCCTTTTGGCCTCTCCTTaGGGCCTAGGCATCATCCAAAGAGACAGCCTCGTCATTCAGGCT +
Preference number: 2 (lower is better)
Translates to: WGSRCAALVSLLASP*GLGIIQRDSLVIQA
Trigger: AGCCTGAATGACGAGGCTGTCTCTTTGGATGATGCCTAGGCCCAAAGGAGAGGCCAAAAGGGAAACCAAGGCTGCACACCTAGAACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360672.2
3UTR CAA 90 bp AGGAGGCTGAATTGGGGTTCTAGGTGTGCAGCCTTGGTTTCCCTTTaGGCCTCTCCTTTGGGCCTAGGCATCATCCAAAGAGACAGCCTC +
Preference number: 2 (lower is better)
Translates to: RRLNWGSRCAALVSL*ASPLGLGIIQRDSL
Trigger: GAGGCTGTCTCTTTGGATGATGCCTAGGCCCAAAGGAGAGGCCAAAAGGGAAACCAAGGCTGCACACCTAGAACCCCAATTCAGCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360672.2
3UTR-3UTR TCA 90 bp CATCTCAGCTTTCCTTTCCCTTCTAGGCCACAGTCCTACCTTCTGAGGTATGGTGGGTGCCCAGGAGGCTaGATTGGGGTTCTAGGTGTG +
Preference number: 2 (lower is better)
Translates to: HLSFPFPSRPQSYLLRYGGCPGG*IGVLGV
Trigger: CACACCTAGAACCCCAATTCAGCCTCCTGGGCACCC...ACCATACCTCAGAAGGTAGGACTGTGGCCTAGAAGGGAAAGGAAAGCTGAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR TCA 90 bp GGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGAGAGAGGGCTTAGCACCTTCGCCTGGCCAATGTGGTaGAACCCCATGTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: GVGCGLRLGIVERGLSTFAWPMW*NPMSTK
Trigger: TTTAGTAGACATGGGGTTTCACCACATTGGCCAGGC...GAAGGTGCTAAGCCCTCTCTCCACAATGCCAAGACGGAGACCACAGCCTACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR CCA 90 bp GTTAATGGTGGGGATGTAGAATGGGGCTCAACAGGCAGGGCATCCAGATGGTACACTAGAGGTCGCAGGTaGGATCATGGCACTGGAAGG +
Preference number: 2 (lower is better)
Translates to: VNGGDVEWGSTGRASRWYTRGRR*DHGTGR
Trigger: CCTTCCAGTGCCATGATCCCACCTGCGACCTCTAGT...GTACCATCTGGATGCCCTGCCTGTTGAGCCCCATTCTACATCCCCACCATTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR TCA 90 bp GGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGAGAGAGGGCTTAGCACCTTCCTGGAAGGAAGTAGGTaGCTTCTAAGGGCTAAGAGA +
Preference number: 2 (lower is better)
Translates to: GVGCGLRLGIVERGLSTFLEGSR*LLRAKR
Trigger: TCTCTTAGCCCTTAGAAGTCACCTACTTCCTTCCAG...GAAGGTGCTAAGCCCTCTCTCCACAATGCCAAGACGGAGACCACAGCCTACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR TCA 90 bp GGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGAGAGAGGGCTTAGCAATGAAATAGAGATCTaGGAGCTAGGCTGGGTGCCG +
Preference number: 2 (lower is better)
Translates to: GFGVGCGLRLGIVERGLSNEIEI*ELGWVP
Trigger: CGGCACCCAGCCTAGCTCTCAGATCTCTATTTCATT...GCTAAGCCCTCTCTCCACAATGCCAAGACGGAGACCACAGCCTACACCAAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR GCA 90 bp AGACATCATCTCAGCTTTCCTTTCCCTTCTAGGCCACAGTCCTACCTTCTGAGGTGGTCCCACCTTCTCTaGACTCGCACTAGAGGTCGC +
Preference number: 2 (lower is better)
Translates to: RHHLSFPFPSRPQSYLLRWSHLL*TRTRGR
Trigger: GCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCA...CCTCAGAAGGTAGGACTGTGGCCTAGAAGGGAAAGGAAAGCTGAGATGATGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR GCA 90 bp CCTCTCCCTGATCCCTTAGCGGATCCAGCAGACCTCTTTCTGTTTATGGAGGCACTGAGATCGTGCCATTaGACTCCAGCATGGGCAACA +
Preference number: 2 (lower is better)
Translates to: PLPDPLADPADLFLFMEALRSCH*TPAWAT
Trigger: TGTTGCCCATGCTGGAGTGCAATGGCACGATCTCAG...TGCCTCCATAAACAGAAAGAGGTCTGCTGGATCCGCTAAGGGATCAGGGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR CCA 90 bp CCTCTCCCTGATCCCTTAGCGGATCCAGCAGACCTCTTTCTGTTTATGGAGGCATCCGTCTTGGCATTGTaGAGAGAGGGCTTAGCACCT +
Preference number: 2 (lower is better)
Translates to: PLPDPLADPADLFLFMEASVLAL*REGLAP
Trigger: AGGTGCTAAGCCCTCTCTCCACAATGCCAAGACGGA...TGCCTCCATAAACAGAAAGAGGTCTGCTGGATCCGCTAAGGGATCAGGGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR GCA 90 bp GGCAGCAGGGAAATCAAGGGCTGGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGCCATCCAAGATCTGCTaGTACGGTAAGACATCATCT +
Preference number: 2 (lower is better)
Translates to: GSREIKGWIWCRLWSPSWPSKIC*YGKTSS
Trigger: AGATGATGTCTTACCGTAGCAGCAGATCTTGGATGG...CCAAGACGGAGACCACAGCCTACACCAAATCCAGCCCTTGATTTCCCTGCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR GCA 90 bp GGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGAGAGAGGGCTTAGCGGACCATCCAAGATCTaGTGCTACGGTAAGACATCA +
Preference number: 2 (lower is better)
Translates to: GFGVGCGLRLGIVERGLSGPSKI*CYGKTS
Trigger: TGATGTCTTACCGTAGCAGCAGATCTTGGATGGTCC...GCTAAGCCCTCTCTCCACAATGCCAAGACGGAGACCACAGCCTACACCAAATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR CCA 90 bp TCTGGAGGTCACATAGAGCCTGGACCATCCAAGATCTGCTGCTACGGTAAGACAGGCAGGGCATCCAGATaGTACTGGAAACCCCAAACT +
Preference number: 2 (lower is better)
Translates to: SGGHIEPGPSKICCYGKTGRASR*YWKPQT
Trigger: AGTTTGGGGTTTCCAGTACCATCTGGATGCCCTGCC...TGTCTTACCGTAGCAGCAGATCTTGGATGGTCCAGGCTCTATGTGACCTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR CCA 90 bp CCTCTCCCTGATCCCTTAGCGGATCCAGCAGACCTCTTTCTGTTTATGGAGGCACCTTCTGAGGTATGGTaGTGGTCTCAACGAGACTTG +
Preference number: 2 (lower is better)
Translates to: PLPDPLADPADLFLFMEAPSEVW*WSQRDL
Trigger: CAAGTCTCGTTGAGACCACCACCATACCTCAGAAGG...TGCCTCCATAAACAGAAAGAGGTCTGCTGGATCCGCTAAGGGATCAGGGAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR CAA 90 bp CAATGGGGGACATTTGAGGACCTAGACTGTCCGAAGTCTTTCTCTTaGCTCTGGAGGTCACATAGAGCCTGGACCATCCAAGATCTGCTG +
Preference number: 2 (lower is better)
Translates to: QWGTFEDLDCPKSFS*LWRSHRAWTIQDLL
Trigger: CAGCAGATCTTGGATGGTCCAGGCTCTATGTGACCTCCAGAGCAAAGAGAAAGACTTCGGACAGTCTAGGTCCTCAAATGTCCCCCATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR TCA 90 bp TGTCCTCAATGGGGGACATTTGAGGACCTAGACTGTCCGAAGTCTTTCTCTTTGCACAGTCCTACCTTCTaGGGTATGGTGGTGGTCTCA +
Preference number: 2 (lower is better)
Translates to: CPQWGTFEDLDCPKSFSLHSPTF*GMVVVS
Trigger: TGAGACCACCACCATACCTCAGAAGGTAGGACTGTG...CAAAGAGAAAGACTTCGGACAGTCTAGGTCCTCAAATGTCCCCCATTGAGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR CCA 90 bp TATGGTGGTGGTCTCAACGAGACTTGTAGATTTTCTGAAAATGACTTTCTCGTTTTGGAACCCTGGCCCTaGTCCCACCTTCTCTGCACT +
Preference number: 2 (lower is better)
Translates to: YGGGLNETCRFSENDFLVLEPWP*SHLLCT
Trigger: AGTGCAGAGAAGGTGGGACCAGGGCCAGGGTTCCAA...AACGAGAAAGTCATTTTCAGAAAATCTACAAGTCTCGTTGAGACCACCACCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR CCA 90 bp TATGGTGGTGGTCTCAACGAGACTTGTAGATTTTCTGAAAATGACTTTCTCGTTCTCTTTTTGGAACCCTaGCCCTGGTCCCACCTTCTC +
Preference number: 2 (lower is better)
Translates to: YGGGLNETCRFSENDFLVLFLEP*PWSHLL
Trigger: GAGAAGGTGGGACCAGGGCCAGGGTTCCAAAAAGAG...AACGAGAAAGTCATTTTCAGAAAATCTACAAGTCTCGTTGAGACCACCACCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR CCA 90 bp GCACAGTACATGCAGCATCTAATAAGAGTTTCCATTGTAGAATGTTTTCACATAGGTGGGGATGTAGAATaGGGCTCAACAGGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: AQYMQHLIRVSIVECFHIGGDVE*GSTGRA
Trigger: TGCCCTGCCTGTTGAGCCCCATTCTACATCCCCACC...TATGTGAAAACATTCTACAATGGAAACTCTTATTAGATGCTGCATGTACTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262866.9
3UTR-3UTR CCA 90 bp TATGGTGGTGGTCTCAACGAGACTTGTAGATTTTCTGAAAATGACTTTCTCGTTGTGGGATCATGGCACTaGAAGGAAGTAGGTGACTTC +
Preference number: 2 (lower is better)
Translates to: YGGGLNETCRFSENDFLVVGSWH*KEVGDF
Trigger: GAAGTCACCTACTTCCTTCCAGTGCCATGATCCCAC...AACGAGAAAGTCATTTTCAGAAAATCTACAAGTCTCGTTGAGACCACCACCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR CCA 90 bp GCACAGTACATGCAGCATCTAATAAGAGTTTCCATTGTAGAATGTTTTCACATACTGTGGTCTCCGTCTTaGCATTGTGGAGAGAGGGCT +
Preference number: 2 (lower is better)
Translates to: AQYMQHLIRVSIVECFHILWSPS*HCGERA
Trigger: AGCCCTCTCTCCACAATGCCAAGACGGAGACCACAG...TATGTGAAAACATTCTACAATGGAAACTCTTATTAGATGCTGCATGTACTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262866.9
3UTR-3UTR CCA 90 bp GCACAGTACATGCAGCATCTAATAAGAGTTTCCATTGTAGAATGTTTTCACATATTTCTACCTTGTGGGTaGGGCCTGGTTAATGGTGGG +
Preference number: 2 (lower is better)
Translates to: AQYMQHLIRVSIVECFHIFLPCG*GLVNGG
Trigger: CCCACCATTAACCAGGCCCCACCCACAAGGTAGAAA...TATGTGAAAACATTCTACAATGGAAACTCTTATTAGATGCTGCATGTACTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262866.9
3UTR-3UTR CCA 90 bp GCACAGTACATGCAGCATCTAATAAGAGTTTCCATTGTAGAATGTTTTCACATATATTCGGCCACAAGATaGCAAGGCCAGTGTGCTAGG +
Preference number: 2 (lower is better)
Translates to: AQYMQHLIRVSIVECFHIYSATR*QGQCAR
Trigger: CCTAGCACACTGGCCTTGCCATCTTGTGGCCGAATA...TATGTGAAAACATTCTACAATGGAAACTCTTATTAGATGCTGCATGTACTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262866.9
3UTR-3UTR CCA 90 bp GCACAGTACATGCAGCATCTAATAAGAGTTTCCATTGTAGAATGTTTTCACATAATCAAGGGCTGGATTTaGTGTAGGCTGTGGTCTCCG +
Preference number: 2 (lower is better)
Translates to: AQYMQHLIRVSIVECFHIIKGWI*CRLWSP
Trigger: CGGAGACCACAGCCTACACCAAATCCAGCCCTTGAT...TATGTGAAAACATTCTACAATGGAAACTCTTATTAGATGCTGCATGTACTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262866.9
3UTR-3UTR CCA 90 bp GCACAGTACATGCAGCATCTAATAAGAGTTTCCATTGTAGAATGTTTTCACATAGCATCCAGATGGTACTaGAAACCCCAAACTCAAGAA +
Preference number: 2 (lower is better)
Translates to: AQYMQHLIRVSIVECFHIASRWY*KPQTQE
Trigger: TTCTTGAGTTTGGGGTTTCCAGTACCATCTGGATGC...TATGTGAAAACATTCTACAATGGAAACTCTTATTAGATGCTGCATGTACTGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262866.9
3UTR TCA 72 bp GAGGGCTTAGCACCTTCTGATGCCCCTGCCCAGCACTaGGGTGCCTGGCCTCACTGCAGTGTGCTAGACTTA +
Preference number: 3 (lower is better)
Translates to: EGLAPSDAPAQH*GAWPHCSVLDL
Trigger: TAAGTCTAGCACACTGCAGTGAGGCCAGGCACCTCAGTGCTGGGCAGGGGCATCAGAAGGTGCTAAGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR GCA 72 bp GAGAGGAAAGAGCAAGGGTACAGGTGGGACCCTAGATaGACCTCTGTGTCCCACCCTCCCTCCCTGAGTGCA +
Preference number: 3 (lower is better)
Translates to: ERKEQGYRWDPR*TSVSHPPSLSA
Trigger: TGCACTCAGGGAGGGAGGGTGGGACACAGAGGTGCATCTAGGGTCCCACCTGTACCCTTGCTCTTTCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR CCA 72 bp CACAGCCTTGCCTCTGGGGTGCCCAGGAGGCTGAATTaGGGTTCTAGGTGTGCAGCCTTGGTTTCCCTTTTG +
Preference number: 3 (lower is better)
Translates to: HSLASGVPRRLN*GSRCAALVSLL
Trigger: CAAAAGGGAAACCAAGGCTGCACACCTAGAACCCCAATTCAGCCTCCTGGGCACCCCAGAGGCAAGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR CCA 72 bp CCCAGGAGGCTTATTCTCTTTTTGGAACCCTGGCCCTaGTCCCACCTTCTCTGCACTCGCACTAGAGGTCGC +
Preference number: 3 (lower is better)
Translates to: PRRLILFLEPWP*SHLLCTRTRGR
Trigger: GCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCAGGGCCAGGGTTCCAAAAAGAGAATAAGCCTCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR CCA 72 bp ATACCTGATAAAGCCTTTCCCACCCCACCTGTAGCTTaGGAACCAGTAGGAGCACTGGAGGGGGTGCCTCCC +
Preference number: 3 (lower is better)
Translates to: IPDKAFPTPPVA*EPVGALEGVPP
Trigger: GGGAGGCACCCCCTCCAGTGCTCCTACTGGTTCCCAAGCTACAGGTGGGGTGGGAAAGGCTTTATCAGGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR CAA 90 bp TGTAGCTTGGGAACCAGTAGGAGCACTGGAGGGGGTGCCTCCCACCCCATCCCTCCGAAGTCTTTCTCTTaGCTCTGGAGGTCACATAGA +
Preference number: 3 (lower is better)
Translates to: CSLGTSRSTGGGASHPIPPKSFS*LWRSHR
Trigger: TCTATGTGACCTCCAGAGCAAAGAGAAAGACTTCGG...AGGGATGGGGTGGGAGGCACCCCCTCCAGTGCTCCTACTGGTTCCCAAGCTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR CAA 90 bp CCTCTCCCTGATCCCTTAGCGGATCCAGCAGACCTCTTTCTGTTTATGGAGGCATCTAGGTGTGCAGCCTaGGTTTCCCTTTTGGCCTCT +
Preference number: 3 (lower is better)
Translates to: PLPDPLADPADLFLFMEASRCAA*VSLLAS
Trigger: AGAGGCCAAAAGGGAAACCAAGGCTGCACACCTAGA...TGCCTCCATAAACAGAAAGAGGTCTGCTGGATCCGCTAAGGGATCAGGGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR TCA 72 bp GTCGCAGGTGGGATCATGGCACTGGAAGGAAGTAGGTaGCTTCTAAGGGCTAAGAGAGGAAAGAGCAAGGGT +
Preference number: 3 (lower is better)
Translates to: VAGGIMALEGSR*LLRAKRGKSKG
Trigger: ACCCTTGCTCTTTCCTCTCTTAGCCCTTAGAAGTCACCTACTTCCTTCCAGTGCCATGATCCCACCTGCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR CAA 90 bp TCTGGAGGTCACATAGAGCCTGGACCATCCAAGATCTGCTGCTACGGTAAGACACTTTTGGCCTCTCCTTaGGGCCTAGGCATCATCCAA +
Preference number: 3 (lower is better)
Translates to: SGGHIEPGPSKICCYGKTLLASP*GLGIIQ
Trigger: TTGGATGATGCCTAGGCCCAAAGGAGAGGCCAAAAG...TGTCTTACCGTAGCAGCAGATCTTGGATGGTCCAGGCTCTATGTGACCTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360672.2
3UTR-3UTR CAA 90 bp GGCAGGGCATCCAGATGGTACTGGAAACCCCAAACTCAAGAACTAACTAGGTCATCTAGGTGTGCAGCCTaGGTTTCCCTTTTGGCCTCT +
Preference number: 3 (lower is better)
Translates to: GRASRWYWKPQTQELTRSSRCAA*VSLLAS
Trigger: AGAGGCCAAAAGGGAAACCAAGGCTGCACACCTAGA...TGACCTAGTTAGTTCTTGAGTTTGGGGTTTCCAGTACCATCTGGATGCCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR-3UTR CAA 90 bp TGTCCTCAATGGGGGACATTTGAGGACCTAGACTGTCCGAAGTCTTTCTCTTTGGCCTTGGTTTCCCTTTaGGCCTCTCCTTTGGGCCTA +
Preference number: 3 (lower is better)
Translates to: CPQWGTFEDLDCPKSFSLALVSL*ASPLGL
Trigger: TAGGCCCAAAGGAGAGGCCAAAAGGGAAACCAAGGC...CAAAGAGAAAGACTTCGGACAGTCTAGGTCCTCAAATGTCCCCCATTGAGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360672.2
3UTR CCA 72 bp GAATGGGGCTCAACAGGCAGGGCATCCAGATGGTACTaGAAACCCCAAACTCAAGAACTAACTAGGTCAGAC +
Preference number: 3 (lower is better)
Translates to: EWGSTGRASRWY*KPQTQELTRSD
Trigger: GTCTGACCTAGTTAGTTCTTGAGTTTGGGGTTTCCAGTACCATCTGGATGCCCTGCCTGTTGAGCCCCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR CCA 72 bp CTTTCTGTTTATGGAGGCAGCAGGGAAATCAAGGGCTaGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGCAT +
Preference number: 3 (lower is better)
Translates to: LSVYGGSREIKG*IWCRLWSPSWH
Trigger: ATGCCAAGACGGAGACCACAGCCTACACCAAATCCAGCCCTTGATTTCCCTGCTGCCTCCATAAACAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR TCA 72 bp GCTTTCCTTTCCCTTCTAGGCCACAGTCCTACCTTCTaGGGTATGGTGGTGGTCTCAACGAGACTTGTAGAT +
Preference number: 3 (lower is better)
Translates to: AFLSLLGHSPTF*GMVVVSTRLVD
Trigger: ATCTACAAGTCTCGTTGAGACCACCACCATACCTCAGAAGGTAGGACTGTGGCCTAGAAGGGAAAGGAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR CCA 72 bp GATGTAGAATGGGGCTCAACAGGCAGGGCATCCAGATaGTACTGGAAACCCCAAACTCAAGAACTAACTAGG +
Preference number: 3 (lower is better)
Translates to: DVEWGSTGRASR*YWKPQTQELTR
Trigger: CCTAGTTAGTTCTTGAGTTTGGGGTTTCCAGTACCATCTGGATGCCCTGCCTGTTGAGCCCCATTCTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR GCA 72 bp TCTGGAGGTCACATAGAGCCTGGACCATCCAAGATCTaGTGCTACGGTAAGACATCATCTCAGCTTTCCTTT +
Preference number: 3 (lower is better)
Translates to: SGGHIEPGPSKI*CYGKTSSQLSF
Trigger: AAAGGAAAGCTGAGATGATGTCTTACCGTAGCAGCAGATCTTGGATGGTCCAGGCTCTATGTGACCTCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR GCA 90 bp TTTTTGGAACCCTGGCCCTGGTCCCACCTTCTCTGCACTCGCACTAGAGGTCGCCTCGGCCGGGCCACCTaGCGGGAAACTGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: FLEPWPWSHLLCTRTRGRLGRAT*RETAQG
Trigger: GCCCTGGGCAGTTTCCCGGCAGGTGGCCCGGCCGAG...GCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCAGGGCCAGGGTTCCAAAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR GCA 90 bp CAAGGGTACAGGTGGGACCCTAGATGCACCTCTGTGTCCCACCCTCCCTCCCTGGAGCACTGGAGGGGGTaGCTCCCACCCCATCCCTCT +
Preference number: 4 (lower is better)
Translates to: QGYRWDPRCTSVSHPPSLEHWRG*LPPHPS
Trigger: AGAGGGATGGGGTGGGAGGCACCCCCTCCAGTGCTC...CAGGGAGGGAGGGTGGGACACAGAGGTGCATCTAGGGTCCCACCTGTACCCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR GCA 90 bp TCTGGGGTGCCCAGGAGGCTGAATTGGGGTTCTAGGTGTGCAGCCTTGGTTTCCCACCTGCCGGGAAACTaGCCAGGGCCACGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SGVPRRLNWGSRCAALVSHLPGN*PGPRLW
Trigger: CCACAGCCGTGGCCCTGGGCAGTTTCCCGGCAGGTG...GGAAACCAAGGCTGCACACCTAGAACCCCAATTCAGCCTCCTGGGCACCCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR GCA 90 bp TTTTTGGAACCCTGGCCCTGGTCCCACCTTCTCTGCACTCGCACTAGAGGTCGCGATCCGGTCCCAGGATaGAGGGCGGCTGAGGCGGAC +
Preference number: 4 (lower is better)
Translates to: FLEPWPWSHLLCTRTRGRDPVPG*RAAEAD
Trigger: GTCCGCCTCAGCCGCCCTGCATCCTGGGACCGGATC...GCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCAGGGCCAGGGTTCCAAAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR GCA 90 bp GGGGTGCCCAGGAGGCTGAATTGGGGTTCTAGGTGTGCAGCCTTGGTTTCCCTTGATCCGGTCCCAGGATaGAGGGCGGCTGAGGCGGAC +
Preference number: 4 (lower is better)
Translates to: GVPRRLNWGSRCAALVSLDPVPG*RAAEAD
Trigger: GTCCGCCTCAGCCGCCCTGCATCCTGGGACCGGATC...AAGGGAAACCAAGGCTGCACACCTAGAACCCCAATTCAGCCTCCTGGGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR GCA 90 bp CTTGCCTCTGGGGTGCCCAGGAGGCTGAATTGGGGTTCTAGGTGTGCAGCCTTGGTAGGGGTATATCCTTaGCAGGGAGCGGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LASGVPRRLNWGSRCAALVGVYP*QGAGQP
Trigger: GGGCTGGCCCGCTCCCTGGCAAGGATATACCCCTAC...CAAGGCTGCACACCTAGAACCCCAATTCAGCCTCCTGGGCACCCCAGAGGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR GCA 90 bp GGCCCTGGTCCCACCTTCTCTGCACTCGCACTAGAGGTCGCAGGTGGGATCATGTGCCCAGCACTGAGGTaGCTGGCCTCACTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: GPGPTFSALALEVAGGIMCPALR*LASLQC
Trigger: ACACTGCAGTGAGGCCAGGCACCTCAGTGCTGGGCA...CATGATCCCACCTGCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCAGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GGCCCTGGTCCCACCTTCTCTGCACTCGCACTAGAGGTCGCAGGTGGGATCATGACCCATGGGAGACTTTaGCCACGTGGACGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GPGPTFSALALEVAGGIMTHGRL*PRGRWG
Trigger: TCCCCAGCGTCCACGTGGCCAAAGTCTCCCATGGGT...CATGATCCCACCTGCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp TGTAGCTTGGGAACCAGTAGGAGCACTGGAGGGGGTGCCTCCCACCCCATCCCTGAGCCTCTCCTGGTCTaGCTCTCCCGGATGAGGAAG +
Preference number: 4 (lower is better)
Translates to: CSLGTSRSTGGGASHPIPEPLLV*LSRMRK
Trigger: CTTCCTCATCCGGGAGAGCCAGACCAGGAGAGGCTC...AGGGATGGGGTGGGAGGCACCCCCTCCAGTGCTCCTACTGGTTCCCAAGCTACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR TCA 90 bp CCTGGTCCCACCTTCTCTGCACTCGCACTAGAGGTCGCAGGTGGGATCATGGCAAGGCCCAGGGCCCTTTaGGCTCTGTCACAGAGACAC +
Preference number: 4 (lower is better)
Translates to: PGPTFSALALEVAGGIMARPRAL*ALSQRH
Trigger: GTGTCTCTGTGACAGAGCTCAAAGGGCCCTGGGCCT...TGCCATGATCCCACCTGCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS-3UTR TCA 90 bp GCTGATGTAGAAGCTGAGGGACTCCCGGAGACCCTCACTGAGAAGAGACTCCTCTCTGGCTCTCCCGGATaGGGAAGGCCCCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: ADVEAEGLPETLTEKRLLSGSPG*GRPLQG
Trigger: ACCCTGGAGGGGCCTTCCTCATCCGGGAGAGCCAGA...GAGGAGTCTCTTCTCAGTGAGGGTCTCCGGGAGTCCCTCAGCTTCTACATCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360672.2
CDS-3UTR GCA 90 bp GAAATCAAGGGCTGGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGACTCGGCCGGGCCACCTaGCGGGAAACTGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: EIKGWIWCRLWSPSWHCGLGRAT*RETAQG
Trigger: GCCCTGGGCAGTTTCCCGGCAGGTGGCCCGGCCGAG...TCCACAATGCCAAGACGGAGACCACAGCCTACACCAAATCCAGCCCTTGATTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR GCA 90 bp CAAGGGTACAGGTGGGACCCTAGATGCACCTCTGTGTCCCACCCTCCCTCCCTGCCTCTGCTTTCTCCCTaGTCAGGCCCTCATACAGCC +
Preference number: 4 (lower is better)
Translates to: QGYRWDPRCTSVSHPPSLPLLSP*SGPHTA
Trigger: GGCTGTATGAGGGCCTGAGCAGGGAGAAAGCAGAGG...CAGGGAGGGAGGGTGGGACACAGAGGTGCATCTAGGGTCCCACCTGTACCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR GCA 90 bp TCTGGGGTGCCCAGGAGGCTGAATTGGGGTTCTAGGTGTGCAGCCTTGGTTTCCGTAGGGGTATATCCTTaGCAGGGAGCGGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: SGVPRRLNWGSRCAALVSVGVYP*QGAGQP
Trigger: GGGCTGGCCCGCTCCCTGGCAAGGATATACCCCTAC...GGAAACCAAGGCTGCACACCTAGAACCCCAATTCAGCCTCCTGGGCACCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp CCTGGTCCCACCTTCTCTGCACTCGCACTAGAGGTCGCAGGTGGGATCATGGCAACCCATGGGAGACTTTaGCCACGTGGACGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: PGPTFSALALEVAGGIMATHGRL*PRGRWG
Trigger: TCCCCAGCGTCCACGTGGCCAAAGTCTCCCATGGGT...TGCCATGATCCCACCTGCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR TCA 90 bp TCTGGAGGTCACATAGAGCCTGGACCATCCAAGATCTGCTGCTACGGTAAGACAGCCCCTGCCCAGCACTaGGGTGCCTGGCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: SGGHIEPGPSKICCYGKTAPAQH*GAWPHC
Trigger: GCAGTGAGGCCAGGCACCTCAGTGCTGGGCAGGGGC...TGTCTTACCGTAGCAGCAGATCTTGGATGGTCCAGGCTCTATGTGACCTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR GCA 90 bp TGGAACCCTGGCCCTGGTCCCACCTTCTCTGCACTCGCACTAGAGGTCGCAGGTCAACAGCAGTTCCTCTaGTTTCTCCCTGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: WNPGPGPTFSALALEVAGQQQFL*FLPAQA
Trigger: GGCCTGAGCAGGGAGAAAGCAGAGGAACTGCTGTTG...ACCTGCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCAGGGCCAGGGTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR GCA 90 bp CTTGCCTCTGGGGTGCCCAGGAGGCTGAATTGGGGTTCTAGGTGTGCAGCCTTGAGGTGGGACCCTAGATaGACCTCTGTGTCCCACCCT +
Preference number: 4 (lower is better)
Translates to: LASGVPRRLNWGSRCAALRWDPR*TSVSHP
Trigger: AGGGTGGGACACAGAGGTGCATCTAGGGTCCCACCT...CAAGGCTGCACACCTAGAACCCCAATTCAGCCTCCTGGGCACCCCAGAGGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR GCA 90 bp CCTGGTCCCACCTTCTCTGCACTCGCACTAGAGGTCGCAGGTGGGATCATGGCAAGGTGGGACCCTAGATaGACCTCTGTGTCCCACCCT +
Preference number: 4 (lower is better)
Translates to: PGPTFSALALEVAGGIMARWDPR*TSVSHP
Trigger: AGGGTGGGACACAGAGGTGCATCTAGGGTCCCACCT...TGCCATGATCCCACCTGCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp TGTAGCTTGGGAACCAGTAGGAGCACTGGAGGGGGTGCCTCCCACCCCATCCCTTGGCCACGTGGACGCTaGGGATGTTATACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: CSLGTSRSTGGGASHPIPWPRGR*GCYTLC
Trigger: GCAGAGAGTATAACATCCCCAGCGTCCACGTGGCCA...AGGGATGGGGTGGGAGGCACCCCCTCCAGTGCTCCTACTGGTTCCCAAGCTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp CAAGGGTACAGGTGGGACCCTAGATGCACCTCTGTGTCCCACCCTCCCTCCCTGTCATACAGCCACCCATaGGAGACTTTGGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: QGYRWDPRCTSVSHPPSLSYSHP*ETLATW
Trigger: CCACGTGGCCAAAGTCTCCCATGGGTGGCTGTATGA...CAGGGAGGGAGGGTGGGACACAGAGGTGCATCTAGGGTCCCACCTGTACCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp TGTAGCTTGGGAACCAGTAGGAGCACTGGAGGGGGTGCCTCCCACCCCATCCCTACTAGAGGTCGCAGGTaGGATCATGGCACTGGAAGG +
Preference number: 4 (lower is better)
Translates to: CSLGTSRSTGGGASHPIPTRGRR*DHGTGR
Trigger: CCTTCCAGTGCCATGATCCCACCTGCGACCTCTAGT...AGGGATGGGGTGGGAGGCACCCCCTCCAGTGCTCCTACTGGTTCCCAAGCTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp CAAGGGTACAGGTGGGACCCTAGATGCACCTCTGTGTCCCACCCTCCCTCCCTGACTAGAGGTCGCAGGTaGGATCATGGCACTGGAAGG +
Preference number: 4 (lower is better)
Translates to: QGYRWDPRCTSVSHPPSLTRGRR*DHGTGR
Trigger: CCTTCCAGTGCCATGATCCCACCTGCGACCTCTAGT...CAGGGAGGGAGGGTGGGACACAGAGGTGCATCTAGGGTCCCACCTGTACCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp CTTGCCTCTGGGGTGCCCAGGAGGCTGAATTGGGGTTCTAGGTGTGCAGCCTTGGGTGGGGATGTAGAATaGGGCTCAACAGGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LASGVPRRLNWGSRCAALGGDVE*GSTGRA
Trigger: TGCCCTGCCTGTTGAGCCCCATTCTACATCCCCACC...CAAGGCTGCACACCTAGAACCCCAATTCAGCCTCCTGGGCACCCCAGAGGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp TGGAACCCTGGCCCTGGTCCCACCTTCTCTGCACTCGCACTAGAGGTCGCAGGTACCCCACCTGTAGCTTaGGAACCAGTAGGAGCACTG +
Preference number: 4 (lower is better)
Translates to: WNPGPGPTFSALALEVAGTPPVA*EPVGAL
Trigger: CAGTGCTCCTACTGGTTCCCAAGCTACAGGTGGGGT...ACCTGCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCAGGGCCAGGGTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR TCA 90 bp GGGGTGCCCAGGAGGCTGAATTGGGGTTCTAGGTGTGCAGCCTTGGTTTCCCTTGGATCCTGTAGTGTCTaGTCCGGTCCCAGGATGCAG +
Preference number: 4 (lower is better)
Translates to: GVPRRLNWGSRCAALVSLGSCSV*SGPRMQ
Trigger: CTGCATCCTGGGACCGGATCAGACACTACAGGATCC...AAGGGAAACCAAGGCTGCACACCTAGAACCCCAATTCAGCCTCCTGGGCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR TCA 90 bp TTTTTGGAACCCTGGCCCTGGTCCCACCTTCTCTGCACTCGCACTAGAGGTCGCGGATCCTGTAGTGTCTaGTCCGGTCCCAGGATGCAG +
Preference number: 4 (lower is better)
Translates to: FLEPWPWSHLLCTRTRGRGSCSV*SGPRMQ
Trigger: CTGCATCCTGGGACCGGATCAGACACTACAGGATCC...GCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCAGGGCCAGGGTTCCAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR TCA 90 bp GCCTCTCCTTTGGGCCTAGGCATCATCCAAAGAGACAGCCTCGTCATTCAGGCTCCCGGAGACCCTCACTaGGAAGAGACTCCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: ASPLGLGIIQRDSLVIQAPGDPH*EETPPL
Trigger: CAGGGGAGGAGTCTCTTCTCAGTGAGGGTCTCCGGG...AGCCTGAATGACGAGGCTGTCTCTTTGGATGATGCCTAGGCCCAAAGGAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360672.2
CDS-3UTR TCA 90 bp AGAGGAAAGAGCAAGGGTACAGGTGGGACCCTAGATGCACCTCTGTGTCCCACCGGGTGCCCAGGAGGCTaGATTGGGGTTCTAGGTGTG +
Preference number: 4 (lower is better)
Translates to: RGKSKGTGGTLDAPLCPTGCPGG*IGVLGV
Trigger: CACACCTAGAACCCCAATTCAGCCTCCTGGGCACCC...GGTGGGACACAGAGGTGCATCTAGGGTCCCACCTGTACCCTTGCTCTTTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR TCA 90 bp CATCTCAGCTTTCCTTTCCCTTCTAGGCCACAGTCCTACCTTCTGAGGTATGGTGCCCCTGCCCAGCACTaGGGTGCCTGGCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: HLSFPFPSRPQSYLLRYGAPAQH*GAWPHC
Trigger: GCAGTGAGGCCAGGCACCTCAGTGCTGGGCAGGGGC...ACCATACCTCAGAAGGTAGGACTGTGGCCTAGAAGGGAAAGGAAAGCTGAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR GCA 90 bp TCTGGGGTGCCCAGGAGGCTGAATTGGGGTTCTAGGTGTGCAGCCTTGGTTTCCTGGTCCCACCTTCTCTaGACTCGCACTAGAGGTCGC +
Preference number: 4 (lower is better)
Translates to: SGVPRRLNWGSRCAALVSWSHLL*TRTRGR
Trigger: GCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCA...GGAAACCAAGGCTGCACACCTAGAACCCCAATTCAGCCTCCTGGGCACCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GGCAGCAGGGAAATCAAGGGCTGGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGCCAGGGCCACGGCTGTaGCCTTGCTTCTCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: GSREIKGWIWCRLWSPSWPGPRL*PCFSLL
Trigger: AAGCAGAGAGAAGCAAGGCCACAGCCGTGGCCCTGG...CCAAGACGGAGACCACAGCCTACACCAAATCCAGCCCTTGATTTCCCTGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp TGTAGCTTGGGAACCAGTAGGAGCACTGGAGGGGGTGCCTCCCACCCCATCCCTGAGACTCCTCCCCTGTaGCAGCTTCAGAAAACAGGA +
Preference number: 4 (lower is better)
Translates to: CSLGTSRSTGGGASHPIPETPPL*QLQKTG
Trigger: TCCTGTTTTCTGAAGCTGCCACAGGGGAGGAGTCTC...AGGGATGGGGTGGGAGGCACCCCCTCCAGTGCTCCTACTGGTTCCCAAGCTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp TGGAACCCTGGCCCTGGTCCCACCTTCTCTGCACTCGCACTAGAGGTCGCAGGTCTAGGTGTGCAGCCTTaGTTTCCCTTTTGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: WNPGPGPTFSALALEVAGLGVQP*FPFWPL
Trigger: GAGAGGCCAAAAGGGAAACCAAGGCTGCACACCTAG...ACCTGCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCAGGGCCAGGGTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp TCTGGGGTGCCCAGGAGGCTGAATTGGGGTTCTAGGTGTGCAGCCTTGGTTTCCTTGGAACCCTGGCCCTaGTCCCACCTTCTCTGCACT +
Preference number: 4 (lower is better)
Translates to: SGVPRRLNWGSRCAALVSLEPWP*SHLLCT
Trigger: AGTGCAGAGAAGGTGGGACCAGGGCCAGGGTTCCAA...GGAAACCAAGGCTGCACACCTAGAACCCCAATTCAGCCTCCTGGGCACCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GGCCCTGGTCCCACCTTCTCTGCACTCGCACTAGAGGTCGCAGGTGGGATCATGGGCAGGGCATCCAGATaGTACTGGAAACCCCAAACT +
Preference number: 4 (lower is better)
Translates to: GPGPTFSALALEVAGGIMGRASR*YWKPQT
Trigger: AGTTTGGGGTTTCCAGTACCATCTGGATGCCCTGCC...CATGATCCCACCTGCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp TGGAACCCTGGCCCTGGTCCCACCTTCTCTGCACTCGCACTAGAGGTCGCAGGTATCAAGGGCTGGATTTaGTGTAGGCTGTGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: WNPGPGPTFSALALEVAGIKGWI*CRLWSP
Trigger: CGGAGACCACAGCCTACACCAAATCCAGCCCTTGAT...ACCTGCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCAGGGCCAGGGTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR TCA 90 bp TGTAGCTTGGGAACCAGTAGGAGCACTGGAGGGGGTGCCTCCCACCCCATCCCTGTTATACTCTCTGCCTaGGACTTCAGACAGCACCGT +
Preference number: 4 (lower is better)
Translates to: CSLGTSRSTGGGASHPIPVILSA*DFRQHR
Trigger: ACGGTGCTGTCTGAAGTCTCAGGCAGAGAGTATAAC...AGGGATGGGGTGGGAGGCACCCCCTCCAGTGCTCCTACTGGTTCCCAAGCTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR TCA 90 bp GGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGAGAGAGGGCTTAGCGCGGCTGAGGCGGACTaGCAGAGAGTAAGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: GFGVGCGLRLGIVERGLSAAEAD*QRVRAS
Trigger: AGAGGCTCTTACTCTCTGTCAGTCCGCCTCAGCCGC...GCTAAGCCCTCTCTCCACAATGCCAAGACGGAGACCACAGCCTACACCAAATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR TCA 90 bp CCTCTCCCTGATCCCTTAGCGGATCCAGCAGACCTCTTTCTGTTTATGGAGGCAAGGATGCAGGGCGGCTaGGGCGGACTGACAGAGAGT +
Preference number: 4 (lower is better)
Translates to: PLPDPLADPADLFLFMEARMQGG*GGLTES
Trigger: ACTCTCTGTCAGTCCGCCTCAGCCGCCCTGCATCCT...TGCCTCCATAAACAGAAAGAGGTCTGCTGGATCCGCTAAGGGATCAGGGAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR TCA 90 bp CCTCTCCCTGATCCCTTAGCGGATCCAGCAGACCTCTTTCTGTTTATGGAGGCACCCGGAGACCCTCACTaGGAAGAGACTCCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: PLPDPLADPADLFLFMEAPGDPH*EETPPL
Trigger: CAGGGGAGGAGTCTCTTCTCAGTGAGGGTCTCCGGG...TGCCTCCATAAACAGAAAGAGGTCTGCTGGATCCGCTAAGGGATCAGGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR TCA 90 bp GGCCCTGGTCCCACCTTCTCTGCACTCGCACTAGAGGTCGCAGGTGGGATCATGAATGAAATAGAGATCTaGGAGCTAGGCTGGGTGCCG +
Preference number: 4 (lower is better)
Translates to: GPGPTFSALALEVAGGIMNEIEI*ELGWVP
Trigger: CGGCACCCAGCCTAGCTCTCAGATCTCTATTTCATT...CATGATCCCACCTGCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR TCA 90 bp GGGGTGCCCAGGAGGCTGAATTGGGGTTCTAGGTGTGCAGCCTTGGTTTCCCTTCTTTCTTCCTCTCCCTaGTCCCTTAGCGGATCCAGC +
Preference number: 4 (lower is better)
Translates to: GVPRRLNWGSRCAALVSLLSSSP*SLSGSS
Trigger: GCTGGATCCGCTAAGGGATCAGGGAGAGGAAGAAAG...AAGGGAAACCAAGGCTGCACACCTAGAACCCCAATTCAGCCTCCTGGGCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR GCA 90 bp GGCAGGGCATCCAGATGGTACTGGAAACCCCAAACTCAAGAACTAACTAGGTCACACCTGCCGGGAAACTaGCCAGGGCCACGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GRASRWYWKPQTQELTRSHLPGN*PGPRLW
Trigger: CCACAGCCGTGGCCCTGGGCAGTTTCCCGGCAGGTG...TGACCTAGTTAGTTCTTGAGTTTGGGGTTTCCAGTACCATCTGGATGCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp CTTGCCTCTGGGGTGCCCAGGAGGCTGAATTGGGGTTCTAGGTGTGCAGCCTTGACAGGTCCCTGGCCTTaGACAGAGGAACTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: LASGVPRRLNWGSRCAALTGPWP*TEELKL
Trigger: AAGCTTGAGTTCCTCTGTCCAAGGCCAGGGACCTGT...CAAGGCTGCACACCTAGAACCCCAATTCAGCCTCCTGGGCACCCCAGAGGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GCCTCTCCTTTGGGCCTAGGCATCATCCAAAGAGACAGCCTCGTCATTCAGGCTCCAGGGCCACGGCTGTaGCCTTGCTTCTCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: ASPLGLGIIQRDSLVIQAPGPRL*PCFSLL
Trigger: AAGCAGAGAGAAGCAAGGCCACAGCCGTGGCCCTGG...AGCCTGAATGACGAGGCTGTCTCTTTGGATGATGCCTAGGCCCAAAGGAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360672.2
CDS-3UTR CCA 90 bp TGGAACCCTGGCCCTGGTCCCACCTTCTCTGCACTCGCACTAGAGGTCGCAGGTCTCTTTCCAGTTGAGTaGTGTCCTCTGCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: WNPGPGPTFSALALEVAGLFPVE*CPLHSH
Trigger: GTGACTGTGCAGAGGACACCACTCAACTGGAAAGAG...ACCTGCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCAGGGCCAGGGTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GGGGTGCCCAGGAGGCTGAATTGGGGTTCTAGGTGTGCAGCCTTGGTTTCCCTTCTCTTTTTGGAACCCTaGCCCTGGTCCCACCTTCTC +
Preference number: 4 (lower is better)
Translates to: GVPRRLNWGSRCAALVSLLFLEP*PWSHLL
Trigger: GAGAAGGTGGGACCAGGGCCAGGGTTCCAAAAAGAG...AAGGGAAACCAAGGCTGCACACCTAGAACCCCAATTCAGCCTCCTGGGCACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp CCTGGTCCCACCTTCTCTGCACTCGCACTAGAGGTCGCAGGTGGGATCATGGCAGGCTTATTCTCTTTTTaGAACCCTGGCCCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: PGPTFSALALEVAGGIMAGLFSF*NPGPGP
Trigger: GGGACCAGGGCCAGGGTTCCAAAAAGAGAATAAGCC...TGCCATGATCCCACCTGCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR TCA 90 bp AGAGGAAAGAGCAAGGGTACAGGTGGGACCCTAGATGCACCTCTGTGTCCCACCGGACACAGGGCTCCTTaGGTAGGCAGCAGATGTCAT +
Preference number: 4 (lower is better)
Translates to: RGKSKGTGGTLDAPLCPTGHRAP*VGSRCH
Trigger: ATGACATCTGCTGCCTACTCAAGGAGCCCTGTGTCC...GGTGGGACACAGAGGTGCATCTAGGGTCCCACCTGTACCCTTGCTCTTTCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS-3UTR TCA 90 bp GGGGTGCCCAGGAGGCTGAATTGGGGTTCTAGGTGTGCAGCCTTGGTTTCCCTTCACAGTCCTACCTTCTaGGGTATGGTGGTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: GVPRRLNWGSRCAALVSLHSPTF*GMVVVS
Trigger: TGAGACCACCACCATACCTCAGAAGGTAGGACTGTG...AAGGGAAACCAAGGCTGCACACCTAGAACCCCAATTCAGCCTCCTGGGCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR TCA 90 bp AGAGGAAAGAGCAAGGGTACAGGTGGGACCCTAGATGCACCTCTGTGTCCCACCCTTTCTTCCTCTCCCTaGTCCCTTAGCGGATCCAGC +
Preference number: 4 (lower is better)
Translates to: RGKSKGTGGTLDAPLCPTLSSSP*SLSGSS
Trigger: GCTGGATCCGCTAAGGGATCAGGGAGAGGAAGAAAG...GGTGGGACACAGAGGTGCATCTAGGGTCCCACCTGTACCCTTGCTCTTTCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR GCA 90 bp TGGAACCCTGGCCCTGGTCCCACCTTCTCTGCACTCGCACTAGAGGTCGCAGGTGCAGAGATTTTCTTCTaGTGGGCAGACTTCCCATTG +
Preference number: 4 (lower is better)
Translates to: WNPGPGPTFSALALEVAGAEIFF*WADFPL
Trigger: CAATGGGAAGTCTGCCCAGCAGAAGAAAATCTCTGC...ACCTGCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCAGGGCCAGGGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR GCA 90 bp GTTGACTCTAGGGGTTGTTTCTACCTTGTGGGTGGGGCCTGGTTAATGGTGGGGCCTCTGCTTTCTCCCTaGTCAGGCCCTCATACAGCC +
Preference number: 4 (lower is better)
Translates to: VDSRGCFYLVGGAWLMVGPLLSP*SGPHTA
Trigger: GGCTGTATGAGGGCCTGAGCAGGGAGAAAGCAGAGG...CCCCACCATTAACCAGGCCCCACCCACAAGGTAGAAACAACCCCTAGAGTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR GCA 90 bp AGACATCATCTCAGCTTTCCTTTCCCTTCTAGGCCACAGTCCTACCTTCTGAGGGAGCACTGGAGGGGGTaGCTCCCACCCCATCCCTCT +
Preference number: 4 (lower is better)
Translates to: RHHLSFPFPSRPQSYLLREHWRG*LPPHPS
Trigger: AGAGGGATGGGGTGGGAGGCACCCCCTCCAGTGCTC...CCTCAGAAGGTAGGACTGTGGCCTAGAAGGGAAAGGAAAGCTGAGATGATGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGAGAGAGGGCTTAGCACAGAGACACAGGCGTaGGGTCCTTGGAGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: GFGVGCGLRLGIVERGLSTETQA*GPWSSS
Trigger: GCTAGAGCTCCAAGGACCCCACGCCTGTGTCTCTGT...GCTAAGCCCTCTCTCCACAATGCCAAGACGGAGACCACAGCCTACACCAAATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS-3UTR CCA 90 bp GGGGTGCCCAGGAGGCTGAATTGGGGTTCTAGGTGTGCAGCCTTGGTTTCCCTTTTAGGGATTCTGGACTaGGGAACCCTCCCAAGCACA +
Preference number: 4 (lower is better)
Translates to: GVPRRLNWGSRCAALVSLLGILD*GTLPST
Trigger: TGTGCTTGGGAGGGTTCCCCAGTCCAGAATCCCTAA...AAGGGAAACCAAGGCTGCACACCTAGAACCCCAATTCAGCCTCCTGGGCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS-3UTR CCA 90 bp AGAGGAAAGAGCAAGGGTACAGGTGGGACCCTAGATGCACCTCTGTGTCCCACCGACAGGTTAGGGCTTTaGGGGCCCTTCTGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: RGKSKGTGGTLDAPLCPTDRLGL*GPFWKS
Trigger: AGACTTCCAGAAGGGCCCCCAAAGCCCTAACCTGTC...GGTGGGACACAGAGGTGCATCTAGGGTCCCACCTGTACCCTTGCTCTTTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS-3UTR CCA 90 bp TCTGGGGTGCCCAGGAGGCTGAATTGGGGTTCTAGGTGTGCAGCCTTGGTTTCCACAGGTCCCTGGCCTTaGACAGAGGAACTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: SGVPRRLNWGSRCAALVSTGPWP*TEELKL
Trigger: AAGCTTGAGTTCCTCTGTCCAAGGCCAGGGACCTGT...GGAAACCAAGGCTGCACACCTAGAACCCCAATTCAGCCTCCTGGGCACCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GGCAGCAGGGAAATCAAGGGCTGGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGCATCCTCAGAGACGATaGTCAATGGCTCCCCGAGTC +
Preference number: 4 (lower is better)
Translates to: GSREIKGWIWCRLWSPSWHPQRR*SMAPRV
Trigger: GACTCGGGGAGCCATTGACCATCGTCTCTGAGGATG...CCAAGACGGAGACCACAGCCTACACCAAATCCAGCCCTTGATTTCCCTGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GGCCCTGGTCCCACCTTCTCTGCACTCGCACTAGAGGTCGCAGGTGGGATCATGTCTTTCTCTTTGCTCTaGAGGTCACATAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GPGPTFSALALEVAGGIMSFSLL*RSHRAW
Trigger: CCAGGCTCTATGTGACCTCCAGAGCAAAGAGAAAGA...CATGATCCCACCTGCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp TTTTTGGAACCCTGGCCCTGGTCCCACCTTCTCTGCACTCGCACTAGAGGTCGCTCCGTCTTGGCATTGTaGAGAGAGGGCTTAGCACCT +
Preference number: 4 (lower is better)
Translates to: FLEPWPWSHLLCTRTRGRSVLAL*REGLAP
Trigger: AGGTGCTAAGCCCTCTCTCCACAATGCCAAGACGGA...GCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCAGGGCCAGGGTTCCAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GGCAGCAGGGAAATCAAGGGCTGGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGCTGTGGTCTCCGTCTTaGCATTGTGGAGAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: GSREIKGWIWCRLWSPSWLWSPS*HCGERA
Trigger: AGCCCTCTCTCCACAATGCCAAGACGGAGACCACAG...CCAAGACGGAGACCACAGCCTACACCAAATCCAGCCCTTGATTTCCCTGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GGCCCTGGTCCCACCTTCTCTGCACTCGCACTAGAGGTCGCAGGTGGGATCATGTCTTCTGAAACAGCATaGCTGTATGTGCGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: GPGPTFSALALEVAGGIMSSETA*LYVRGP
Trigger: TGGACCACGCACATACAGCCATGCTGTTTCAGAAGA...CATGATCCCACCTGCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS-3UTR TCA 90 bp GGGGTGCCCAGGAGGCTGAATTGGGGTTCTAGGTGTGCAGCCTTGGTTTCCCTTGTTATACTCTCTGCCTaGGACTTCAGACAGCACCGT +
Preference number: 4 (lower is better)
Translates to: GVPRRLNWGSRCAALVSLVILSA*DFRQHR
Trigger: ACGGTGCTGTCTGAAGTCTCAGGCAGAGAGTATAAC...AAGGGAAACCAAGGCTGCACACCTAGAACCCCAATTCAGCCTCCTGGGCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR TCA 90 bp CATCTCAGCTTTCCTTTCCCTTCTAGGCCACAGTCCTACCTTCTGAGGTATGGTAGGATGCAGGGCGGCTaGGGCGGACTGACAGAGAGT +
Preference number: 4 (lower is better)
Translates to: HLSFPFPSRPQSYLLRYGRMQGG*GGLTES
Trigger: ACTCTCTGTCAGTCCGCCTCAGCCGCCCTGCATCCT...ACCATACCTCAGAAGGTAGGACTGTGGCCTAGAAGGGAAAGGAAAGCTGAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR TCA 90 bp CCTCTCCCTGATCCCTTAGCGGATCCAGCAGACCTCTTTCTGTTTATGGAGGCAGAAGGTGAGGCGCGGTaGGATGTACAGCCAGCCATT +
Preference number: 4 (lower is better)
Translates to: PLPDPLADPADLFLFMEAEGEAR*DVQPAI
Trigger: AATGGCTGGCTGTACATCTCACCGCGCCTCACCTTC...TGCCTCCATAAACAGAAAGAGGTCTGCTGGATCCGCTAAGGGATCAGGGAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR TCA 90 bp GAAATCAAGGGCTGGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGAGGGTGCCCAGGAGGCTaGATTGGGGTTCTAGGTGTG +
Preference number: 4 (lower is better)
Translates to: EIKGWIWCRLWSPSWHCGGCPGG*IGVLGV
Trigger: CACACCTAGAACCCCAATTCAGCCTCCTGGGCACCC...TCCACAATGCCAAGACGGAGACCACAGCCTACACCAAATCCAGCCCTTGATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR TCA 90 bp TTTTTGGAACCCTGGCCCTGGTCCCACCTTCTCTGCACTCGCACTAGAGGTCGCTCAATGGGGGACATTTaGGGACCTAGACTGTCCGAA +
Preference number: 4 (lower is better)
Translates to: FLEPWPWSHLLCTRTRGRSMGDI*GPRLSE
Trigger: TTCGGACAGTCTAGGTCCTCAAATGTCCCCCATTGA...GCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCAGGGCCAGGGTTCCAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR TCA 90 bp TCTGGGGTGCCCAGGAGGCTGAATTGGGGTTCTAGGTGTGCAGCCTTGGTTTCCAATGAAATAGAGATCTaGGAGCTAGGCTGGGTGCCG +
Preference number: 4 (lower is better)
Translates to: SGVPRRLNWGSRCAALVSNEIEI*ELGWVP
Trigger: CGGCACCCAGCCTAGCTCTCAGATCTCTATTTCATT...GGAAACCAAGGCTGCACACCTAGAACCCCAATTCAGCCTCCTGGGCACCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR GCA 90 bp GCTGATGTAGAAGCTGAGGGACTCCCGGAGACCCTCACTGAGAAGAGACTCCTCTTGAGTGGTGTCCTCTaGACAGTCACAGGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: ADVEAEGLPETLTEKRLLLSGVL*TVTGRG
Trigger: ACCCCTACCTGTGACTGTGCAGAGGACACCACTCAA...GAGGAGTCTCTTCTCAGTGAGGGTCTCCGGGAGTCCCTCAGCTTCTACATCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360672.2
CDS-3UTR GCA 90 bp CCTGGTCCCACCTTCTCTGCACTCGCACTAGAGGTCGCAGGTGGGATCATGGCAGGACCATCCAAGATCTaGTGCTACGGTAAGACATCA +
Preference number: 4 (lower is better)
Translates to: PGPTFSALALEVAGGIMAGPSKI*CYGKTS
Trigger: TGATGTCTTACCGTAGCAGCAGATCTTGGATGGTCC...TGCCATGATCCCACCTGCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR GCA 90 bp GGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGAGAGAGGGCTTAGCACCTTCCTGAGATCGTGCCATTaGACTCCAGCATGGGCAACA +
Preference number: 4 (lower is better)
Translates to: GVGCGLRLGIVERGLSTFLRSCH*TPAWAT
Trigger: TGTTGCCCATGCTGGAGTGCAATGGCACGATCTCAG...GAAGGTGCTAAGCCCTCTCTCCACAATGCCAAGACGGAGACCACAGCCTACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGAGAGAGGGCTTAGCCATCCTCAGAGACGATaGTCAATGGCTCCCCGAGTC +
Preference number: 4 (lower is better)
Translates to: GFGVGCGLRLGIVERGLSHPQRR*SMAPRV
Trigger: GACTCGGGGAGCCATTGACCATCGTCTCTGAGGATG...GCTAAGCCCTCTCTCCACAATGCCAAGACGGAGACCACAGCCTACACCAAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GAAATCAAGGGCTGGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGAGAGCCTCTCCTGGTCTaGCTCTCCCGGATGAGGAAG +
Preference number: 4 (lower is better)
Translates to: EIKGWIWCRLWSPSWHCGEPLLV*LSRMRK
Trigger: CTTCCTCATCCGGGAGAGCCAGACCAGGAGAGGCTC...TCCACAATGCCAAGACGGAGACCACAGCCTACACCAAATCCAGCCCTTGATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GGCAGCAGGGAAATCAAGGGCTGGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGCTAGGTGTGCAGCCTTaGTTTCCCTTTTGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: GSREIKGWIWCRLWSPSWLGVQP*FPFWPL
Trigger: GAGAGGCCAAAAGGGAAACCAAGGCTGCACACCTAG...CCAAGACGGAGACCACAGCCTACACCAAATCCAGCCCTTGATTTCCCTGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp TTTTTGGAACCCTGGCCCTGGTCCCACCTTCTCTGCACTCGCACTAGAGGTCGCGTGGGATCATGGCACTaGAAGGAAGTAGGTGACTTC +
Preference number: 4 (lower is better)
Translates to: FLEPWPWSHLLCTRTRGRVGSWH*KEVGDF
Trigger: GAAGTCACCTACTTCCTTCCAGTGCCATGATCCCAC...GCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCAGGGCCAGGGTTCCAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp TTTTTGGAACCCTGGCCCTGGTCCCACCTTCTCTGCACTCGCACTAGAGGTCGCCTACCTTCTGAGGTATaGTGGTGGTCTCAACGAGAC +
Preference number: 4 (lower is better)
Translates to: FLEPWPWSHLLCTRTRGRLPSEV*WWSQRD
Trigger: GTCTCGTTGAGACCACCACCATACCTCAGAAGGTAG...GCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCAGGGCCAGGGTTCCAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GGGGTGCCCAGGAGGCTGAATTGGGGTTCTAGGTGTGCAGCCTTGGTTTCCCTTAGGTCACATAGAGCCTaGACCATCCAAGATCTGCTG +
Preference number: 4 (lower is better)
Translates to: GVPRRLNWGSRCAALVSLRSHRA*TIQDLL
Trigger: CAGCAGATCTTGGATGGTCCAGGCTCTATGTGACCT...AAGGGAAACCAAGGCTGCACACCTAGAACCCCAATTCAGCCTCCTGGGCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GGCAGCAGGGAAATCAAGGGCTGGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGTCCGTCTTGGCATTGTaGAGAGAGGGCTTAGCACCT +
Preference number: 4 (lower is better)
Translates to: GSREIKGWIWCRLWSPSWSVLAL*REGLAP
Trigger: AGGTGCTAAGCCCTCTCTCCACAATGCCAAGACGGA...CCAAGACGGAGACCACAGCCTACACCAAATCCAGCCCTTGATTTCCCTGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp TCTGGGGTGCCCAGGAGGCTGAATTGGGGTTCTAGGTGTGCAGCCTTGGTTTCCAGGGAAATCAAGGGCTaGATTTGGTGTAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SGVPRRLNWGSRCAALVSREIKG*IWCRLW
Trigger: CCACAGCCTACACCAAATCCAGCCCTTGATTTCCCT...GGAAACCAAGGCTGCACACCTAGAACCCCAATTCAGCCTCCTGGGCACCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR TCA 90 bp GGCAGGGCATCCAGATGGTACTGGAAACCCCAAACTCAAGAACTAACTAGGTCAGGAGTGAGGGGAAGGTaGGGCGCGGTGAGATGTACA +
Preference number: 4 (lower is better)
Translates to: GRASRWYWKPQTQELTRSGVRGR*GAVRCT
Trigger: TGTACATCTCACCGCGCCTCACCTTCCCCTCACTCC...TGACCTAGTTAGTTCTTGAGTTTGGGGTTTCCAGTACCATCTGGATGCCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR TCA 90 bp AGACATCATCTCAGCTTTCCTTTCCCTTCTAGGCCACAGTCCTACCTTCTGAGGGGAGTGAGGGGAAGGTaGGGCGCGGTGAGATGTACA +
Preference number: 4 (lower is better)
Translates to: RHHLSFPFPSRPQSYLLRGVRGR*GAVRCT
Trigger: TGTACATCTCACCGCGCCTCACCTTCCCCTCACTCC...CCTCAGAAGGTAGGACTGTGGCCTAGAAGGGAAAGGAAAGCTGAGATGATGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR TCA 90 bp CCTCTCCCTGATCCCTTAGCGGATCCAGCAGACCTCTTTCTGTTTATGGAGGCACCAGCTCTTTCCAGTTaGGTGGTGTCCTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: PLPDPLADPADLFLFMEAPALSS*VVSSAQ
Trigger: CTGTGCAGAGGACACCACTCAACTGGAAAGAGCTGG...TGCCTCCATAAACAGAAAGAGGTCTGCTGGATCCGCTAAGGGATCAGGGAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR TCA 90 bp GCCTCTCCTTTGGGCCTAGGCATCATCCAAAGAGACAGCCTCGTCATTCAGGCTCACAGTCCTACCTTCTaGGGTATGGTGGTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: ASPLGLGIIQRDSLVIQAHSPTF*GMVVVS
Trigger: TGAGACCACCACCATACCTCAGAAGGTAGGACTGTG...AGCCTGAATGACGAGGCTGTCTCTTTGGATGATGCCTAGGCCCAAAGGAGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360672.2
CDS-3UTR TCA 90 bp GCCTCTCCTTTGGGCCTAGGCATCATCCAAAGAGACAGCCTCGTCATTCAGGCTAGATGGAGGTTGCAGTaGGCTGAGATCGTGCCATTG +
Preference number: 4 (lower is better)
Translates to: ASPLGLGIIQRDSLVIQARWRLQ*AEIVPL
Trigger: CAATGGCACGATCTCAGCTCACTGCAACCTCCATCT...AGCCTGAATGACGAGGCTGTCTCTTTGGATGATGCCTAGGCCCAAAGGAGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360672.2
CDS-3UTR GCA 90 bp GAAATCAAGGGCTGGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGACCACGGCTGTGGCCTTaGTTCTCTCTGCTTCCATGG +
Preference number: 4 (lower is better)
Translates to: EIKGWIWCRLWSPSWHCGPRLWP*FSLLPW
Trigger: CCATGGAAGCAGAGAGAAGCAAGGCCACAGCCGTGG...TCCACAATGCCAAGACGGAGACCACAGCCTACACCAAATCCAGCCCTTGATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR GCA 90 bp GAAATCAAGGGCTGGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGATGGTCCCACCTTCTCTaGACTCGCACTAGAGGTCGC +
Preference number: 4 (lower is better)
Translates to: EIKGWIWCRLWSPSWHCGWSHLL*TRTRGR
Trigger: GCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCA...TCCACAATGCCAAGACGGAGACCACAGCCTACACCAAATCCAGCCCTTGATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR GCA 90 bp GGCAGGGCATCCAGATGGTACTGGAAACCCCAAACTCAAGAACTAACTAGGTCATGCCCAGCACTGAGGTaGCTGGCCTCACTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: GRASRWYWKPQTQELTRSCPALR*LASLQC
Trigger: ACACTGCAGTGAGGCCAGGCACCTCAGTGCTGGGCA...TGACCTAGTTAGTTCTTGAGTTTGGGGTTTCCAGTACCATCTGGATGCCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GTTAATGGTGGGGATGTAGAATGGGGCTCAACAGGCAGGGCATCCAGATGGTACCTGAGACGCATGCTCTaGCTGGACAGGTTAGGGCTT +
Preference number: 4 (lower is better)
Translates to: VNGGDVEWGSTGRASRWYLRRML*LDRLGL
Trigger: AAGCCCTAACCTGTCCAGCCAGAGCATGCGTCTCAG...GTACCATCTGGATGCCCTGCCTGTTGAGCCCCATTCTACATCCCCACCATTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS-3UTR CCA 90 bp GTTAATGGTGGGGATGTAGAATGGGGCTCAACAGGCAGGGCATCCAGATGGTACAGAGACGATGGTCAATaGCTCCCCGAGTCTCAGCGA +
Preference number: 4 (lower is better)
Translates to: VNGGDVEWGSTGRASRWYRDDGQ*LPESQR
Trigger: TCGCTGAGACTCGGGGAGCCATTGACCATCGTCTCT...GTACCATCTGGATGCCCTGCCTGTTGAGCCCCATTCTACATCCCCACCATTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp CCTCTCCCTGATCCCTTAGCGGATCCAGCAGACCTCTTTCTGTTTATGGAGGCATCATACAGCCACCCATaGGAGACTTTGGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: PLPDPLADPADLFLFMEASYSHP*ETLATW
Trigger: CCACGTGGCCAAAGTCTCCCATGGGTGGCTGTATGA...TGCCTCCATAAACAGAAAGAGGTCTGCTGGATCCGCTAAGGGATCAGGGAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp AGAGGAAAGAGCAAGGGTACAGGTGGGACCCTAGATGCACCTCTGTGTCCCACCCTCTTTCCAGTTGAGTaGTGTCCTCTGCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: RGKSKGTGGTLDAPLCPTLFPVE*CPLHSH
Trigger: GTGACTGTGCAGAGGACACCACTCAACTGGAAAGAG...GGTGGGACACAGAGGTGCATCTAGGGTCCCACCTGTACCCTTGCTCTTTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp TCTGGAGGTCACATAGAGCCTGGACCATCCAAGATCTGCTGCTACGGTAAGACACCCAGGAGGCTGAATTaGGGTTCTAGGTGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SGGHIEPGPSKICCYGKTPRRLN*GSRCAA
Trigger: GGCTGCACACCTAGAACCCCAATTCAGCCTCCTGGG...TGTCTTACCGTAGCAGCAGATCTTGGATGGTCCAGGCTCTATGTGACCTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GTTAATGGTGGGGATGTAGAATGGGGCTCAACAGGCAGGGCATCCAGATGGTACCTCTTTTTGGAACCCTaGCCCTGGTCCCACCTTCTC +
Preference number: 4 (lower is better)
Translates to: VNGGDVEWGSTGRASRWYLFLEP*PWSHLL
Trigger: GAGAAGGTGGGACCAGGGCCAGGGTTCCAAAAAGAG...GTACCATCTGGATGCCCTGCCTGTTGAGCCCCATTCTACATCCCCACCATTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp CCTGGTCCCACCTTCTCTGCACTCGCACTAGAGGTCGCAGGTGGGATCATGGCAGCATCCAGATGGTACTaGAAACCCCAAACTCAAGAA +
Preference number: 4 (lower is better)
Translates to: PGPTFSALALEVAGGIMAASRWY*KPQTQE
Trigger: TTCTTGAGTTTGGGGTTTCCAGTACCATCTGGATGC...TGCCATGATCCCACCTGCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGAGAGAGGGCTTAGCTTTCTACCTTGTGGGTaGGGCCTGGTTAATGGTGGG +
Preference number: 4 (lower is better)
Translates to: GFGVGCGLRLGIVERGLSFLPCG*GLVNGG
Trigger: CCCACCATTAACCAGGCCCCACCCACAAGGTAGAAA...GCTAAGCCCTCTCTCCACAATGCCAAGACGGAGACCACAGCCTACACCAAATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp AGAGGAAAGAGCAAGGGTACAGGTGGGACCCTAGATGCACCTCTGTGTCCCACCCCTTCTGAGGTATGGTaGTGGTCTCAACGAGACTTG +
Preference number: 4 (lower is better)
Translates to: RGKSKGTGGTLDAPLCPTPSEVW*WSQRDL
Trigger: CAAGTCTCGTTGAGACCACCACCATACCTCAGAAGG...GGTGGGACACAGAGGTGCATCTAGGGTCCCACCTGTACCCTTGCTCTTTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp AGAGACAGCCTCGTCATTCAGGCTGATGTAGAAGCTGAGGGACTCCCGGAGACCCCTTCTGAGGTATGGTaGTGGTCTCAACGAGACTTG +
Preference number: 4 (lower is better)
Translates to: RDSLVIQADVEAEGLPETPSEVW*WSQRDL
Trigger: CAAGTCTCGTTGAGACCACCACCATACCTCAGAAGG...GGTCTCCGGGAGTCCCTCAGCTTCTACATCAGCCTGAATGACGAGGCTGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360672.2
CDS-3UTR CCA 90 bp CCTCTCCCTGATCCCTTAGCGGATCCAGCAGACCTCTTTCTGTTTATGGAGGCACATTGCACTCCAGCATaGGCAACAGGGCAAGACTCC +
Preference number: 4 (lower is better)
Translates to: PLPDPLADPADLFLFMEAHCTPA*ATGQDS
Trigger: GGAGTCTTGCCCTGTTGCCCATGCTGGAGTGCAATG...TGCCTCCATAAACAGAAAGAGGTCTGCTGGATCCGCTAAGGGATCAGGGAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GTTAATGGTGGGGATGTAGAATGGGGCTCAACAGGCAGGGCATCCAGATGGTACCATTGCACTCCAGCATaGGCAACAGGGCAAGACTCC +
Preference number: 4 (lower is better)
Translates to: VNGGDVEWGSTGRASRWYHCTPA*ATGQDS
Trigger: GGAGTCTTGCCCTGTTGCCCATGCTGGAGTGCAATG...GTACCATCTGGATGCCCTGCCTGTTGAGCCCCATTCTACATCCCCACCATTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGAGAGAGGGCTTAGCTATTCGGCCACAAGATaGCAAGGCCAGTGTGCTAGG +
Preference number: 4 (lower is better)
Translates to: GFGVGCGLRLGIVERGLSYSATR*QGQCAR
Trigger: CCTAGCACACTGGCCTTGCCATCTTGTGGCCGAATA...GCTAAGCCCTCTCTCCACAATGCCAAGACGGAGACCACAGCCTACACCAAATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GGCAGCAGGGAAATCAAGGGCTGGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGAGGGAAATCAAGGGCTaGATTTGGTGTAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GSREIKGWIWCRLWSPSWREIKG*IWCRLW
Trigger: CCACAGCCTACACCAAATCCAGCCCTTGATTTCCCT...CCAAGACGGAGACCACAGCCTACACCAAATCCAGCCCTTGATTTCCCTGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR TCA 90 bp TGTCCTCAATGGGGGACATTTGAGGACCTAGACTGTCCGAAGTCTTTCTCTTTGGCGGCTGAGGCGGACTaGCAGAGAGTAAGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: CPQWGTFEDLDCPKSFSLAAEAD*QRVRAS
Trigger: AGAGGCTCTTACTCTCTGTCAGTCCGCCTCAGCCGC...CAAAGAGAAAGACTTCGGACAGTCTAGGTCCTCAAATGTCCCCCATTGAGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR TCA 90 bp AGACATCATCTCAGCTTTCCTTTCCCTTCTAGGCCACAGTCCTACCTTCTGAGGGAAGGTGAGGCGCGGTaGGATGTACAGCCAGCCATT +
Preference number: 4 (lower is better)
Translates to: RHHLSFPFPSRPQSYLLREGEAR*DVQPAI
Trigger: AATGGCTGGCTGTACATCTCACCGCGCCTCACCTTC...CCTCAGAAGGTAGGACTGTGGCCTAGAAGGGAAAGGAAAGCTGAGATGATGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR TCA 90 bp GGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGAGAGAGGGCTTAGCTCAATGGGGGACATTTaGGGACCTAGACTGTCCGAA +
Preference number: 4 (lower is better)
Translates to: GFGVGCGLRLGIVERGLSSMGDI*GPRLSE
Trigger: TTCGGACAGTCTAGGTCCTCAAATGTCCCCCATTGA...GCTAAGCCCTCTCTCCACAATGCCAAGACGGAGACCACAGCCTACACCAAATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR GCA 90 bp GCATCCAGATGGTACTGGAAACCCCAAACTCAAGAACTAACTAGGTCAGACCCCCCACGGCTGTGGCCTTaGTTCTCTCTGCTTCCATGG +
Preference number: 4 (lower is better)
Translates to: ASRWYWKPQTQELTRSDPPRLWP*FSLLPW
Trigger: CCATGGAAGCAGAGAGAAGCAAGGCCACAGCCGTGG...GGGGTCTGACCTAGTTAGTTCTTGAGTTTGGGGTTTCCAGTACCATCTGGATGC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GAAATCAAGGGCTGGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGAGAGCAAGGGTACAGGTaGGACCCTAGATGCACCTCT +
Preference number: 4 (lower is better)
Translates to: EIKGWIWCRLWSPSWHCGEQGYR*DPRCTS
Trigger: AGAGGTGCATCTAGGGTCCCACCTGTACCCTTGCTC...TCCACAATGCCAAGACGGAGACCACAGCCTACACCAAATCCAGCCCTTGATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GCATCCAGATGGTACTGGAAACCCCAAACTCAAGAACTAACTAGGTCAGACCCCGGTGGGGATGTAGAATaGGGCTCAACAGGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: ASRWYWKPQTQELTRSDPGGDVE*GSTGRA
Trigger: TGCCCTGCCTGTTGAGCCCCATTCTACATCCCCACC...GGGGTCTGACCTAGTTAGTTCTTGAGTTTGGGGTTTCCAGTACCATCTGGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GAAATCAAGGGCTGGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGAACCCCACCTGTAGCTTaGGAACCAGTAGGAGCACTG +
Preference number: 4 (lower is better)
Translates to: EIKGWIWCRLWSPSWHCGTPPVA*EPVGAL
Trigger: CAGTGCTCCTACTGGTTCCCAAGCTACAGGTGGGGT...TCCACAATGCCAAGACGGAGACCACAGCCTACACCAAATCCAGCCCTTGATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR TCA 90 bp GGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGAGAGAGGGCTTAGCCTGGAAGGAAGTAGGTaGCTTCTAAGGGCTAAGAGA +
Preference number: 4 (lower is better)
Translates to: GFGVGCGLRLGIVERGLSLEGSR*LLRAKR
Trigger: TCTCTTAGCCCTTAGAAGTCACCTACTTCCTTCCAG...GCTAAGCCCTCTCTCCACAATGCCAAGACGGAGACCACAGCCTACACCAAATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR GCA 90 bp CATCTCAGCTTTCCTTTCCCTTCTAGGCCACAGTCCTACCTTCTGAGGTATGGTCAGGGATGGATCAGCTaGCCCATGCTCCTTAGGGAT +
Preference number: 4 (lower is better)
Translates to: HLSFPFPSRPQSYLLRYGQGWIS*PMLLRD
Trigger: ATCCCTAAGGAGCATGGGGCAGCTGATCCATCCCTG...ACCATACCTCAGAAGGTAGGACTGTGGCCTAGAAGGGAAAGGAAAGCTGAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS-3UTR GCA 90 bp GTTGACTCTAGGGGTTGTTTCTACCTTGTGGGTGGGGCCTGGTTAATGGTGGGGAGCTCAGCATCTGTCTaGAGTCAGCAGTTTGTACAC +
Preference number: 4 (lower is better)
Translates to: VDSRGCFYLVGGAWLMVGSSASV*SQQFVH
Trigger: GTGTACAAACTGCTGACTGCAGACAGATGCTGAGCT...CCCCACCATTAACCAGGCCCCACCCACAAGGTAGAAACAACCCCTAGAGTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS-3UTR GCA 90 bp GGCAGGGCATCCAGATGGTACTGGAAACCCCAAACTCAAGAACTAACTAGGTCAGGCCTTGCTTCTCTCTaGTTCCATGGTCACAGGTCC +
Preference number: 4 (lower is better)
Translates to: GRASRWYWKPQTQELTRSGLASL*FHGHRS
Trigger: GGACCTGTGACCATGGAAGCAGAGAGAAGCAAGGCC...TGACCTAGTTAGTTCTTGAGTTTGGGGTTTCCAGTACCATCTGGATGCCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR GCA 90 bp AGACATCATCTCAGCTTTCCTTTCCCTTCTAGGCCACAGTCCTACCTTCTGAGGCAACAGCAGTTCCTCTaGTTTCTCCCTGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: RHHLSFPFPSRPQSYLLRQQQFL*FLPAQA
Trigger: GGCCTGAGCAGGGAGAAAGCAGAGGAACTGCTGTTG...CCTCAGAAGGTAGGACTGTGGCCTAGAAGGGAAAGGAAAGCTGAGATGATGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR GCA 90 bp GTTGACTCTAGGGGTTGTTTCTACCTTGTGGGTGGGGCCTGGTTAATGGTGGGGGGACCATCCAAGATCTaGTGCTACGGTAAGACATCA +
Preference number: 4 (lower is better)
Translates to: VDSRGCFYLVGGAWLMVGGPSKI*CYGKTS
Trigger: TGATGTCTTACCGTAGCAGCAGATCTTGGATGGTCC...CCCCACCATTAACCAGGCCCCACCCACAAGGTAGAAACAACCCCTAGAGTCAAC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR GCA 90 bp AGAGGAAAGAGCAAGGGTACAGGTGGGACCCTAGATGCACCTCTGTGTCCCACCCGAAGTCTTTCTCTTTaGTCTGGAGGTCACATAGAG +
Preference number: 4 (lower is better)
Translates to: RGKSKGTGGTLDAPLCPTRSLSL*SGGHIE
Trigger: CTCTATGTGACCTCCAGAGCAAAGAGAAAGACTTCG...GGTGGGACACAGAGGTGCATCTAGGGTCCCACCTGTACCCTTGCTCTTTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR GCA 90 bp GTTAATGGTGGGGATGTAGAATGGGGCTCAACAGGCAGGGCATCCAGATGGTACCAGCATGGCTGTATGTaGGTGGTCCATAGCACAGTA +
Preference number: 4 (lower is better)
Translates to: VNGGDVEWGSTGRASRWYQHGCM*VVHSTV
Trigger: TACTGTGCTATGGACCACGCACATACAGCCATGCTG...GTACCATCTGGATGCCCTGCCTGTTGAGCCCCATTCTACATCCCCACCATTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS-3UTR CCA 90 bp AGACATCATCTCAGCTTTCCTTTCCCTTCTAGGCCACAGTCCTACCTTCTGAGGCTTTGGGGGCCCTTCTaGAAGTCTGCCAGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: RHHLSFPFPSRPQSYLLRLWGPF*KSASVL
Trigger: AAGGACACTGGCAGACTTCCAGAAGGGCCCCCAAAG...CCTCAGAAGGTAGGACTGTGGCCTAGAAGGGAAAGGAAAGCTGAGATGATGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS-3UTR CCA 90 bp GGCAGCAGGGAAATCAAGGGCTGGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGAGAGGAACTCAAGCTTaGGCTTGGCAGAGATTTTCT +
Preference number: 4 (lower is better)
Translates to: GSREIKGWIWCRLWSPSWRGTQA*AWQRFS
Trigger: AGAAAATCTCTGCCAAGCCCAAGCTTGAGTTCCTCT...CCAAGACGGAGACCACAGCCTACACCAAATCCAGCCCTTGATTTCCCTGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GGCAGGGCATCCAGATGGTACTGGAAACCCCAAACTCAAGAACTAACTAGGTCATGGCCACGTGGACGCTaGGGATGTTATACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: GRASRWYWKPQTQELTRSWPRGR*GCYTLC
Trigger: GCAGAGAGTATAACATCCCCAGCGTCCACGTGGCCA...TGACCTAGTTAGTTCTTGAGTTTGGGGTTTCCAGTACCATCTGGATGCCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GCATCCAGATGGTACTGGAAACCCCAAACTCAAGAACTAACTAGGTCAGACCCCGAGCAAGGGTACAGGTaGGACCCTAGATGCACCTCT +
Preference number: 4 (lower is better)
Translates to: ASRWYWKPQTQELTRSDPEQGYR*DPRCTS
Trigger: AGAGGTGCATCTAGGGTCCCACCTGTACCCTTGCTC...GGGGTCTGACCTAGTTAGTTCTTGAGTTTGGGGTTTCCAGTACCATCTGGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GTTGACTCTAGGGGTTGTTTCTACCTTGTGGGTGGGGCCTGGTTAATGGTGGGGTCTTTCTCTTTGCTCTaGAGGTCACATAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: VDSRGCFYLVGGAWLMVGSFSLL*RSHRAW
Trigger: CCAGGCTCTATGTGACCTCCAGAGCAAAGAGAAAGA...CCCCACCATTAACCAGGCCCCACCCACAAGGTAGAAACAACCCCTAGAGTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp TTTTTGGAACCCTGGCCCTGGTCCCACCTTCTCTGCACTCGCACTAGAGGTCGCAAAAAGAAAAAGAGCTaGGGCTGTTGTCCTCAATGG +
Preference number: 4 (lower is better)
Translates to: FLEPWPWSHLLCTRTRGRKKKKS*GCCPQW
Trigger: CCATTGAGGACAACAGCCCCAGCTCTTTTTCTTTTT...GCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCAGGGCCAGGGTTCCAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp CATCTCAGCTTTCCTTTCCCTTCTAGGCCACAGTCCTACCTTCTGAGGTATGGTCTGTGGTCTCCGTCTTaGCATTGTGGAGAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: HLSFPFPSRPQSYLLRYGLWSPS*HCGERA
Trigger: AGCCCTCTCTCCACAATGCCAAGACGGAGACCACAG...ACCATACCTCAGAAGGTAGGACTGTGGCCTAGAAGGGAAAGGAAAGCTGAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGAGAGAGGGCTTAGCATTTGGTGTAGGCTGTaGTCTCCGTCTTGGCATTGT +
Preference number: 4 (lower is better)
Translates to: GFGVGCGLRLGIVERGLSIWCRL*SPSWHC
Trigger: ACAATGCCAAGACGGAGACCACAGCCTACACCAAAT...GCTAAGCCCTCTCTCCACAATGCCAAGACGGAGACCACAGCCTACACCAAATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR TCA 90 bp TGTCCTCAATGGGGGACATTTGAGGACCTAGACTGTCCGAAGTCTTTCTCTTTGCCAGCTCTTTCCAGTTaGGTGGTGTCCTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: CPQWGTFEDLDCPKSFSLPALSS*VVSSAQ
Trigger: CTGTGCAGAGGACACCACTCAACTGGAAAGAGCTGG...CAAAGAGAAAGACTTCGGACAGTCTAGGTCCTCAAATGTCCCCCATTGAGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR TCA 90 bp GTTAATGGTGGGGATGTAGAATGGGGCTCAACAGGCAGGGCATCCAGATGGTACCTGGAAGGAAGTAGGTaGCTTCTAAGGGCTAAGAGA +
Preference number: 4 (lower is better)
Translates to: VNGGDVEWGSTGRASRWYLEGSR*LLRAKR
Trigger: TCTCTTAGCCCTTAGAAGTCACCTACTTCCTTCCAG...GTACCATCTGGATGCCCTGCCTGTTGAGCCCCATTCTACATCCCCACCATTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR TCA 90 bp CATCTCAGCTTTCCTTTCCCTTCTAGGCCACAGTCCTACCTTCTGAGGTATGGTAGATGGAGGTTGCAGTaGGCTGAGATCGTGCCATTG +
Preference number: 4 (lower is better)
Translates to: HLSFPFPSRPQSYLLRYGRWRLQ*AEIVPL
Trigger: CAATGGCACGATCTCAGCTCACTGCAACCTCCATCT...ACCATACCTCAGAAGGTAGGACTGTGGCCTAGAAGGGAAAGGAAAGCTGAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR GCA 90 bp GTTAATGGTGGGGATGTAGAATGGGGCTCAACAGGCAGGGCATCCAGATGGTACGCAGAGATTTTCTTCTaGTGGGCAGACTTCCCATTG +
Preference number: 4 (lower is better)
Translates to: VNGGDVEWGSTGRASRWYAEIFF*WADFPL
Trigger: CAATGGGAAGTCTGCCCAGCAGAAGAAAATCTCTGC...GTACCATCTGGATGCCCTGCCTGTTGAGCCCCATTCTACATCCCCACCATTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR GCA 90 bp GCCTCTCCTTTGGGCCTAGGCATCATCCAAAGAGACAGCCTCGTCATTCAGGCTCCATCCAAGATCTGCTaGTACGGTAAGACATCATCT +
Preference number: 4 (lower is better)
Translates to: ASPLGLGIIQRDSLVIQAPSKIC*YGKTSS
Trigger: AGATGATGTCTTACCGTAGCAGCAGATCTTGGATGG...AGCCTGAATGACGAGGCTGTCTCTTTGGATGATGCCTAGGCCCAAAGGAGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360672.2
CDS-3UTR CCA 90 bp CCTCAATGGGGGACATTTGAGGACCTAGACTGTCCGAAGTCTTTCTCTTTGCTCTTTGTACACCAGGGATaGATCAGCTGCCCCATGCTC +
Preference number: 4 (lower is better)
Translates to: PQWGTFEDLDCPKSFSLLFVHQG*ISCPML
Trigger: GAGCATGGGGCAGCTGATCCATCCCTGGTGTACAAA...GAGCAAAGAGAAAGACTTCGGACAGTCTAGGTCCTCAAATGTCCCCCATTGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS-3UTR CCA 90 bp GTTGACTCTAGGGGTTGTTTCTACCTTGTGGGTGGGGCCTGGTTAATGGTGGGGACTCAAGCTTGGGCTTaGCAGAGATTTTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: VDSRGCFYLVGGAWLMVGTQAWA*QRFSSA
Trigger: AGCAGAAGAAAATCTCTGCCAAGCCCAAGCTTGAGT...CCCCACCATTAACCAGGCCCCACCCACAAGGTAGAAACAACCCCTAGAGTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGAGAGAGGGCTTAGCGCATCCAGATGGTACTaGAAACCCCAAACTCAAGAA +
Preference number: 4 (lower is better)
Translates to: GFGVGCGLRLGIVERGLSASRWY*KPQTQE
Trigger: TTCTTGAGTTTGGGGTTTCCAGTACCATCTGGATGC...GCTAAGCCCTCTCTCCACAATGCCAAGACGGAGACCACAGCCTACACCAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GAAATCAAGGGCTGGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGAGGCTGTTGTCCTCAATaGGGGACATTTGAGGACCTA +
Preference number: 4 (lower is better)
Translates to: EIKGWIWCRLWSPSWHCGGCCPQ*GTFEDL
Trigger: TAGGTCCTCAAATGTCCCCCATTGAGGACAACAGCC...TCCACAATGCCAAGACGGAGACCACAGCCTACACCAAATCCAGCCCTTGATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GGCAGGGCATCCAGATGGTACTGGAAACCCCAAACTCAAGAACTAACTAGGTCATATTCGGCCACAAGATaGCAAGGCCAGTGTGCTAGG +
Preference number: 4 (lower is better)
Translates to: GRASRWYWKPQTQELTRSYSATR*QGQCAR
Trigger: CCTAGCACACTGGCCTTGCCATCTTGTGGCCGAATA...TGACCTAGTTAGTTCTTGAGTTTGGGGTTTCCAGTACCATCTGGATGCCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp CATCTCAGCTTTCCTTTCCCTTCTAGGCCACAGTCCTACCTTCTGAGGTATGGTATCAAGGGCTGGATTTaGTGTAGGCTGTGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: HLSFPFPSRPQSYLLRYGIKGWI*CRLWSP
Trigger: CGGAGACCACAGCCTACACCAAATCCAGCCCTTGAT...ACCATACCTCAGAAGGTAGGACTGTGGCCTAGAAGGGAAAGGAAAGCTGAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
3UTR CAA 72 bp AATTGGGGTTCTAGGTGTGCAGCCTTGGTTTCCCTTTaGGCCTCTCCTTTGGGCCTAGGCATCATCCAAAGA +
Preference number: 4 (lower is better)
Translates to: NWGSRCAALVSL*ASPLGLGIIQR
Trigger: TCTTTGGATGATGCCTAGGCCCAAAGGAGAGGCCAAAAGGGAAACCAAGGCTGCACACCTAGAACCCCAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360672.2
CDS-3UTR TCA 90 bp CCTCAATGGGGGACATTTGAGGACCTAGACTGTCCGAAGTCTTTCTCTTTGCTCGCCTGGCCAATGTGGTaGAACCCCATGTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: PQWGTFEDLDCPKSFSLLAWPMW*NPMSTK
Trigger: TTTAGTAGACATGGGGTTTCACCACATTGGCCAGGC...GAGCAAAGAGAAAGACTTCGGACAGTCTAGGTCCTCAAATGTCCCCCATTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR TCA 90 bp CATCTCAGCTTTCCTTTCCCTTCTAGGCCACAGTCCTACCTTCTGAGGTATGGTGCCTGGCCAATGTGGTaGAACCCCATGTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: HLSFPFPSRPQSYLLRYGAWPMW*NPMSTK
Trigger: TTTAGTAGACATGGGGTTTCACCACATTGGCCAGGC...ACCATACCTCAGAAGGTAGGACTGTGGCCTAGAAGGGAAAGGAAAGCTGAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR GCA 90 bp TGTCCTCAATGGGGGACATTTGAGGACCTAGACTGTCCGAAGTCTTTCTCTTTGCTGAGATCGTGCCATTaGACTCCAGCATGGGCAACA +
Preference number: 4 (lower is better)
Translates to: CPQWGTFEDLDCPKSFSLLRSCH*TPAWAT
Trigger: TGTTGCCCATGCTGGAGTGCAATGGCACGATCTCAG...CAAAGAGAAAGACTTCGGACAGTCTAGGTCCTCAAATGTCCCCCATTGAGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp CCTCTCCCTGATCCCTTAGCGGATCCAGCAGACCTCTTTCTGTTTATGGAGGCAACTCAAGCTTGGGCTTaGCAGAGATTTTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: PLPDPLADPADLFLFMEATQAWA*QRFSSA
Trigger: AGCAGAAGAAAATCTCTGCCAAGCCCAAGCTTGAGT...TGCCTCCATAAACAGAAAGAGGTCTGCTGGATCCGCTAAGGGATCAGGGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GGCAGGGCATCCAGATGGTACTGGAAACCCCAAACTCAAGAACTAACTAGGTCACTACCTTCTGAGGTATaGTGGTGGTCTCAACGAGAC +
Preference number: 4 (lower is better)
Translates to: GRASRWYWKPQTQELTRSLPSEV*WWSQRD
Trigger: GTCTCGTTGAGACCACCACCATACCTCAGAAGGTAG...TGACCTAGTTAGTTCTTGAGTTTGGGGTTTCCAGTACCATCTGGATGCCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp AGACATCATCTCAGCTTTCCTTTCCCTTCTAGGCCACAGTCCTACCTTCTGAGGAGGTCACATAGAGCCTaGACCATCCAAGATCTGCTG +
Preference number: 4 (lower is better)
Translates to: RHHLSFPFPSRPQSYLLRRSHRA*TIQDLL
Trigger: CAGCAGATCTTGGATGGTCCAGGCTCTATGTGACCT...CCTCAGAAGGTAGGACTGTGGCCTAGAAGGGAAAGGAAAGCTGAGATGATGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR GCA 90 bp TCTGGAGGTCACATAGAGCCTGGACCATCCAAGATCTGCTGCTACGGTAAGACACGAAGTCTTTCTCTTTaGTCTGGAGGTCACATAGAG +
Preference number: 4 (lower is better)
Translates to: SGGHIEPGPSKICCYGKTRSLSL*SGGHIE
Trigger: CTCTATGTGACCTCCAGAGCAAAGAGAAAGACTTCG...TGTCTTACCGTAGCAGCAGATCTTGGATGGTCCAGGCTCTATGTGACCTCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GCCTCTCCTTTGGGCCTAGGCATCATCCAAAGAGACAGCCTCGTCATTCAGGCTATCATCGAGGGAAATTaGTTTGTCATCAAAGGCTTG +
Preference number: 4 (lower is better)
Translates to: ASPLGLGIIQRDSLVIQAIIEGN*FVIKGL
Trigger: CAAGCCTTTGATGACAAACCAATTTCCCTCGATGAT...AGCCTGAATGACGAGGCTGTCTCTTTGGATGATGCCTAGGCCCAAAGGAGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360672.2
CDS-3UTR CCA 90 bp TGTCCTCAATGGGGGACATTTGAGGACCTAGACTGTCCGAAGTCTTTCTCTTTGGGCTGTTGTCCTCAATaGGGGACATTTGAGGACCTA +
Preference number: 4 (lower is better)
Translates to: CPQWGTFEDLDCPKSFSLGCCPQ*GTFEDL
Trigger: TAGGTCCTCAAATGTCCCCCATTGAGGACAACAGCC...CAAAGAGAAAGACTTCGGACAGTCTAGGTCCTCAAATGTCCCCCATTGAGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp CCTCAATGGGGGACATTTGAGGACCTAGACTGTCCGAAGTCTTTCTCTTTGCTCATTTGGTGTAGGCTGTaGTCTCCGTCTTGGCATTGT +
Preference number: 4 (lower is better)
Translates to: PQWGTFEDLDCPKSFSLLIWCRL*SPSWHC
Trigger: ACAATGCCAAGACGGAGACCACAGCCTACACCAAAT...GAGCAAAGAGAAAGACTTCGGACAGTCTAGGTCCTCAAATGTCCCCCATTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp AGACATCATCTCAGCTTTCCTTTCCCTTCTAGGCCACAGTCCTACCTTCTGAGGATGGCTGTATGTGCGTaGTCCATAGCACAGTACATG +
Preference number: 4 (lower is better)
Translates to: RHHLSFPFPSRPQSYLLRMAVCA*SIAQYM
Trigger: CATGTACTGTGCTATGGACCACGCACATACAGCCAT...CCTCAGAAGGTAGGACTGTGGCCTAGAAGGGAAAGGAAAGCTGAGATGATGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262866.9
3UTR CAA 72 bp ACATTTGAGGACCTAGACTGTCCGAAGTCTTTCTCTTaGCTCTGGAGGTCACATAGAGCCTGGACCATCCAA +
Preference number: 4 (lower is better)
Translates to: TFEDLDCPKSFS*LWRSHRAWTIQ
Trigger: TTGGATGGTCCAGGCTCTATGTGACCTCCAGAGCAAAGAGAAAGACTTCGGACAGTCTAGGTCCTCAAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR TCA 90 bp GCACAGTACATGCAGCATCTAATAAGAGTTTCCATTGTAGAATGTTTTCACATATCTGGCTCTCCCGGATaGGGAAGGCCCCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: AQYMQHLIRVSIVECFHISGSPG*GRPLQG
Trigger: ACCCTGGAGGGGCCTTCCTCATCCGGGAGAGCCAGA...TATGTGAAAACATTCTACAATGGAAACTCTTATTAGATGCTGCATGTACTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS-3UTR GCA 90 bp CATCTCAGCTTTCCTTTCCCTTCTAGGCCACAGTCCTACCTTCTGAGGTATGGTCCATCCAAGATCTGCTaGTACGGTAAGACATCATCT +
Preference number: 4 (lower is better)
Translates to: HLSFPFPSRPQSYLLRYGPSKIC*YGKTSS
Trigger: AGATGATGTCTTACCGTAGCAGCAGATCTTGGATGG...ACCATACCTCAGAAGGTAGGACTGTGGCCTAGAAGGGAAAGGAAAGCTGAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GTTAATGGTGGGGATGTAGAATGGGGCTCAACAGGCAGGGCATCCAGATGGTACATCATCGAGGGAAATTaGTTTGTCATCAAAGGCTTG +
Preference number: 4 (lower is better)
Translates to: VNGGDVEWGSTGRASRWYIIEGN*FVIKGL
Trigger: CAAGCCTTTGATGACAAACCAATTTCCCTCGATGAT...GTACCATCTGGATGCCCTGCCTGTTGAGCCCCATTCTACATCCCCACCATTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GGCAGGGCATCCAGATGGTACTGGAAACCCCAAACTCAAGAACTAACTAGGTCAAGAGGAACTCAAGCTTaGGCTTGGCAGAGATTTTCT +
Preference number: 4 (lower is better)
Translates to: GRASRWYWKPQTQELTRSRGTQA*AWQRFS
Trigger: AGAAAATCTCTGCCAAGCCCAAGCTTGAGTTCCTCT...TGACCTAGTTAGTTCTTGAGTTTGGGGTTTCCAGTACCATCTGGATGCCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp GAAATCAAGGGCTGGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGAAAAAAGAAAAAGAGCTaGGGCTGTTGTCCTCAATGG +
Preference number: 4 (lower is better)
Translates to: EIKGWIWCRLWSPSWHCGKKKKS*GCCPQW
Trigger: CCATTGAGGACAACAGCCCCAGCTCTTTTTCTTTTT...TCCACAATGCCAAGACGGAGACCACAGCCTACACCAAATCCAGCCCTTGATTTC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp TCAGATGAAACATTAAATTGTCTTCCTCGATTCTCCATCGGGTGTAGAGTTTTTAGAGACGATGGTCAATaGCTCCCCGAGTCTCAGCGA +
Preference number: 4 (lower is better)
Translates to: SDETLNCLPRFSIGCRVFRDDGQ*LPESQR
Trigger: TCGCTGAGACTCGGGGAGCCATTGACCATCGTCTCT...AAAAACTCTACACCCGATGGAGAATCGAGGAAGACAATTTAATGTTTCATCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS-3UTR CCA 90 bp TATGGTGGTGGTCTCAACGAGACTTGTAGATTTTCTGAAAATGACTTTCTCGTTGAGACTCCTCCCCTGTaGCAGCTTCAGAAAACAGGA +
Preference number: 4 (lower is better)
Translates to: YGGGLNETCRFSENDFLVETPPL*QLQKTG
Trigger: TCCTGTTTTCTGAAGCTGCCACAGGGGAGGAGTCTC...AACGAGAAAGTCATTTTCAGAAAATCTACAAGTCTCGTTGAGACCACCACCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CCA 90 bp TATGGTGGTGGTCTCAACGAGACTTGTAGATTTTCTGAAAATGACTTTCTCGTTGGCTTATTCTCTTTTTaGAACCCTGGCCCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: YGGGLNETCRFSENDFLVGLFSF*NPGPGP
Trigger: GGGACCAGGGCCAGGGTTCCAAAAAGAGAATAAGCC...AACGAGAAAGTCATTTTCAGAAAATCTACAAGTCTCGTTGAGACCACCACCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR GCA 90 bp GCACAGTACATGCAGCATCTAATAAGAGTTTCCATTGTAGAATGTTTTCACATATTGAGTGGTGTCCTCTaGACAGTCACAGGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: AQYMQHLIRVSIVECFHILSGVL*TVTGRG
Trigger: ACCCCTACCTGTGACTGTGCAGAGGACACCACTCAA...TATGTGAAAACATTCTACAATGGAAACTCTTATTAGATGCTGCATGTACTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS-3UTR CCA 90 bp GCACAGTACATGCAGCATCTAATAAGAGTTTCCATTGTAGAATGTTTTCACATAAGAACTCTCTCAGCCTaGGAGGATCTTCAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: AQYMQHLIRVSIVECFHIRTLSA*EDLQGE
Trigger: CTCTCCCTGAAGATCCTCCCAGGCTGAGAGAGTTCT...TATGTGAAAACATTCTACAATGGAAACTCTTATTAGATGCTGCATGTACTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS GCA 90 bp CCCCGAGTCTCAGCGACAGCTCGGCCGGGCCACCTGCCGGGAAACTaGCCAGGGCCACGGCTGTGGCCTTGCTTCTCTCTGCTTCCATGG +
Preference number: 5 (lower is better)
Translates to: PRVSATARPGHLPGN*PGPRLWPCFSLLPW
Trigger: CCATGGAAGCAGAGAGAAGCAAGGCCACAGCCGTGGCCCTGGGCAGTTTCCCGGCAGGTGGCCCGGCCGAGCTGTCGCTGAGACTCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS GCA 90 bp GGTCAATGGCTCCCCGAGTCTCAGCGACAGCTCGGCCGGGCCACCTaGCGGGAAACTGCCCAGGGCCACGGCTGTGGCCTTGCTTCTCTC +
Preference number: 5 (lower is better)
Translates to: GQWLPESQRQLGRAT*RETAQGHGCGLASL
Trigger: GAGAGAAGCAAGGCCACAGCCGTGGCCCTGGGCAGTTTCCCGGCAGGTGGCCCGGCCGAGCTGTCGCTGAGACTCGGGGAGCCATTGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp TGTAGCTTGGGAACCAGTAGGAGCACTGGAGGGGGTGCCTCCCACCCCATCCCTGGTAGGGGTATATCCTaGCCAGGGAGCGGGCCAGCC +
Preference number: 5 (lower is better)
Translates to: CSLGTSRSTGGGASHPIPGRGIS*PGSGPA
Trigger: GGCTGGCCCGCTCCCTGGCAAGGATATACCCCTACC...AGGGATGGGGTGGGAGGCACCCCCTCCAGTGCTCCTACTGGTTCCCAAGCTACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp TCTGGGGTGCCCAGGAGGCTGAATTGGGGTTCTAGGTGTGCAGCCTTGGTTTCCGGTAGGGGTATATCCTaGCCAGGGAGCGGGCCAGCC +
Preference number: 5 (lower is better)
Translates to: SGVPRRLNWGSRCAALVSGRGIS*PGSGPA
Trigger: GGCTGGCCCGCTCCCTGGCAAGGATATACCCCTACC...GGAAACCAAGGCTGCACACCTAGAACCCCAATTCAGCCTCCTGGGCACCCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp CAAGGGTACAGGTGGGACCCTAGATGCACCTCTGTGTCCCACCCTCCCTCCCTGCACCCCACCTGTAGCTaGGGAACCAGTAGGAGCACT +
Preference number: 5 (lower is better)
Translates to: QGYRWDPRCTSVSHPPSLHPTCS*GTSRST
Trigger: AGTGCTCCTACTGGTTCCCAAGCTACAGGTGGGGTG...CAGGGAGGGAGGGTGGGACACAGAGGTGCATCTAGGGTCCCACCTGTACCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp GGCCCTGGTCCCACCTTCTCTGCACTCGCACTAGAGGTCGCAGGTGGGATCATGTGGGCAGACTTCCCATaGTTCCTCAGCAGAGCACTC +
Preference number: 5 (lower is better)
Translates to: GPGPTFSALALEVAGGIMWADFP*FLSRAL
Trigger: GAGTGCTCTGCTGAGGAACAATGGGAAGTCTGCCCA...CATGATCCCACCTGCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCAGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp TCTGGGGTGCCCAGGAGGCTGAATTGGGGTTCTAGGTGTGCAGCCTTGGTTTCCGCTGTGGTCTCCGTCTaGGCATTGTGGAGAGAGGGC +
Preference number: 5 (lower is better)
Translates to: SGVPRRLNWGSRCAALVSAVVSV*ALWREG
Trigger: GCCCTCTCTCCACAATGCCAAGACGGAGACCACAGC...GGAAACCAAGGCTGCACACCTAGAACCCCAATTCAGCCTCCTGGGCACCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS TCA 90 bp GGACTGACAGAGAGTAAGAGCCTCTCCTGGTCTGGCTCTCCCGGATaGGGAAGGCCCCTCCAGGGTTCCCAGGTAACAACAGCAGTTCCT +
Preference number: 5 (lower is better)
Translates to: GLTESKSLSWSGSPG*GRPLQGSQVTTAVP
Trigger: AGGAACTGCTGTTGTTACCTGGGAACCCTGGAGGGGCCTTCCTCATCCGGGAGAGCCAGACCAGGAGAGGCTCTTACTCTCTGTCAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS CCA 90 bp ACAGCTCTGCTGAGACGCATGCTCTGGCTGGACAGGTTAGGGCTTTaGGGGCCCTTCTGGAAGTCTGCCAGTGTCCTTGGTCCTAGGACA +
Preference number: 5 (lower is better)
Translates to: TALLRRMLWLDRLGL*GPFWKSASVLGPRT
Trigger: TGTCCTAGGACCAAGGACACTGGCAGACTTCCAGAAGGGCCCCCAAAGCCCTAACCTGTCCAGCCAGAGCATGCGTCTCAGCAGAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS CCA 90 bp GGCCCTCATACAGCCACCCATGGGAGACTTTGGCCACGTGGACGCTaGGGATGTTATACTCTCTGCCTGAGACTTCAGACAGCACCGTCC +
Preference number: 5 (lower is better)
Translates to: GPHTATHGRLWPRGR*GCYTLCLRLQTAPS
Trigger: GGACGGTGCTGTCTGAAGTCTCAGGCAGAGAGTATAACATCCCCAGCGTCCACGTGGCCAAAGTCTCCCATGGGTGGCTGTATGAGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp GGCAGCAGGGAAATCAAGGGCTGGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGGGACAGGTTAGGGCTTaGGGGGCCCTTCTGGAAGTC +
Preference number: 5 (lower is better)
Translates to: GSREIKGWIWCRLWSPSWGQVRA*GALLEV
Trigger: GACTTCCAGAAGGGCCCCCAAAGCCCTAACCTGTCC...CCAAGACGGAGACCACAGCCTACACCAAATCCAGCCCTTGATTTCCCTGCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS-3UTR CAA 90 bp AGAGGAAAGAGCAAGGGTACAGGTGGGACCCTAGATGCACCTCTGTGTCCCACCGCCACGGCTGTGGCCTaGCTTCTCTCTGCTTCCATG +
Preference number: 5 (lower is better)
Translates to: RGKSKGTGGTLDAPLCPTATAVA*LLSASM
Trigger: CATGGAAGCAGAGAGAAGCAAGGCCACAGCCGTGGC...GGTGGGACACAGAGGTGCATCTAGGGTCCCACCTGTACCCTTGCTCTTTCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp TGGAACCCTGGCCCTGGTCCCACCTTCTCTGCACTCGCACTAGAGGTCGCAGGTATGTACAGCCAGCCATaGTCAAGGCAGTGGATCCTG +
Preference number: 5 (lower is better)
Translates to: WNPGPGPTFSALALEVAGMYSQP*SRQWIL
Trigger: CAGGATCCACTGCCTTGACAATGGCTGGCTGTACAT...ACCTGCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCAGGGCCAGGGTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp GGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGAGAGAGGGCTTAGCACCTTCGCTGTGGTCTCCGTCTaGGCATTGTGGAGAGAGGGC +
Preference number: 5 (lower is better)
Translates to: GVGCGLRLGIVERGLSTFAVVSV*ALWREG
Trigger: GCCCTCTCTCCACAATGCCAAGACGGAGACCACAGC...GAAGGTGCTAAGCCCTCTCTCCACAATGCCAAGACGGAGACCACAGCCTACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS GCA 90 bp TCTGCAGTCAGCAGTTTGTACACCAGGGATGGATCAGCTGCCCCATaGTCCTTAGGGATTCTGGACTGGGGAACCCTCCCAAGCACAGCC +
Preference number: 5 (lower is better)
Translates to: SAVSSLYTRDGSAAP*SLGILDWGTLPSTA
Trigger: GGCTGTGCTTGGGAGGGTTCCCCAGTCCAGAATCCCTAAGGAGCATGGGGCAGCTGATCCATCCCTGGTGTACAAACTGCTGACTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS CCA 90 bp CTGCTCAGGCCCTCATACAGCCACCCATGGGAGACTTTGGCCACGTaGACGCTGGGGATGTTATACTCTCTGCCTGAGACTTCAGACAGC +
Preference number: 5 (lower is better)
Translates to: LLRPSYSHPWETLAT*TLGMLYSLPETSDS
Trigger: GCTGTCTGAAGTCTCAGGCAGAGAGTATAACATCCCCAGCGTCCACGTGGCCAAAGTCTCCCATGGGTGGCTGTATGAGGGCCTGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp GGCCCTGGTCCCACCTTCTCTGCACTCGCACTAGAGGTCGCAGGTGGGATCATGTCTGCAGTCAGCAGTTaGTACACCAGGGATGGATCA +
Preference number: 5 (lower is better)
Translates to: GPGPTFSALALEVAGGIMSAVSS*YTRDGS
Trigger: TGATCCATCCCTGGTGTACAAACTGCTGACTGCAGA...CATGATCCCACCTGCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS-3UTR CAA 90 bp TCTGGGGTGCCCAGGAGGCTGAATTGGGGTTCTAGGTGTGCAGCCTTGGTTTCCTGGGCAGACTTCCCATaGTTCCTCAGCAGAGCACTC +
Preference number: 5 (lower is better)
Translates to: SGVPRRLNWGSRCAALVSWADFP*FLSRAL
Trigger: GAGTGCTCTGCTGAGGAACAATGGGAAGTCTGCCCA...GGAAACCAAGGCTGCACACCTAGAACCCCAATTCAGCCTCCTGGGCACCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp GTTGACTCTAGGGGTTGTTTCTACCTTGTGGGTGGGGCCTGGTTAATGGTGGGGGCCACGGCTGTGGCCTaGCTTCTCTCTGCTTCCATG +
Preference number: 5 (lower is better)
Translates to: VDSRGCFYLVGGAWLMVGATAVA*LLSASM
Trigger: CATGGAAGCAGAGAGAAGCAAGGCCACAGCCGTGGC...CCCCACCATTAACCAGGCCCCACCCACAAGGTAGAAACAACCCCTAGAGTCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp CCTGGTCCCACCTTCTCTGCACTCGCACTAGAGGTCGCAGGTGGGATCATGGCAATGTACAGCCAGCCATaGTCAAGGCAGTGGATCCTG +
Preference number: 5 (lower is better)
Translates to: PGPTFSALALEVAGGIMAMYSQP*SRQWIL
Trigger: CAGGATCCACTGCCTTGACAATGGCTGGCTGTACAT...TGCCATGATCCCACCTGCGACCTCTAGTGCGAGTGCAGAGAAGGTGGGACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp TCTGGGGTGCCCAGGAGGCTGAATTGGGGTTCTAGGTGTGCAGCCTTGGTTTCCGTCTCCGTCTTGGCATaGTGGAGAGAGGGCTTAGCA +
Preference number: 5 (lower is better)
Translates to: SGVPRRLNWGSRCAALVSVSVLA*WREGLA
Trigger: TGCTAAGCCCTCTCTCCACAATGCCAAGACGGAGAC...GGAAACCAAGGCTGCACACCTAGAACCCCAATTCAGCCTCCTGGGCACCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS GCA 90 bp GCATCTGTCTGCAGTCAGCAGTTTGTACACCAGGGATGGATCAGCTaGCCCATGCTCCTTAGGGATTCTGGACTGGGGAACCCTCCCAAG +
Preference number: 5 (lower is better)
Translates to: ASVCSQQFVHQGWIS*PMLLRDSGLGNPPK
Trigger: CTTGGGAGGGTTCCCCAGTCCAGAATCCCTAAGGAGCATGGGGCAGCTGATCCATCCCTGGTGTACAAACTGCTGACTGCAGACAGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS-3UTR CAA 90 bp GGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGAGAGAGGGCTTAGCACCTTCAGTCTGCCAGTGTCCTaGGTCCTAGGACACCCAGAA +
Preference number: 5 (lower is better)
Translates to: GVGCGLRLGIVERGLSTFSLPVS*VLGHPE
Trigger: TTCTGGGTGTCCTAGGACCAAGGACACTGGCAGACT...GAAGGTGCTAAGCCCTCTCTCCACAATGCCAAGACGGAGACCACAGCCTACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS-3UTR CAA 90 bp AGACATCATCTCAGCTTTCCTTTCCCTTCTAGGCCACAGTCCTACCTTCTGAGGCACCCATGGGAGACTTaGGCCACGTGGACGCTGGGG +
Preference number: 5 (lower is better)
Translates to: RHHLSFPFPSRPQSYLLRHPWET*ATWTLG
Trigger: CCCCAGCGTCCACGTGGCCAAAGTCTCCCATGGGTG...CCTCAGAAGGTAGGACTGTGGCCTAGAAGGGAAAGGAAAGCTGAGATGATGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp GGCAGCAGGGAAATCAAGGGCTGGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGGCCTTGGTTTCCCTTTaGGCCTCTCCTTTGGGCCTA +
Preference number: 5 (lower is better)
Translates to: GSREIKGWIWCRLWSPSWALVSL*ASPLGL
Trigger: TAGGCCCAAAGGAGAGGCCAAAAGGGAAACCAAGGC...CCAAGACGGAGACCACAGCCTACACCAAATCCAGCCCTTGATTTCCCTGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp GGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGAGAGAGGGCTTAGCGCTGAGATCGTGCCATaGCACTCCAGCATGGGCAAC +
Preference number: 5 (lower is better)
Translates to: GFGVGCGLRLGIVERGLSAEIVP*HSSMGN
Trigger: GTTGCCCATGCTGGAGTGCAATGGCACGATCTCAGC...GCTAAGCCCTCTCTCCACAATGCCAAGACGGAGACCACAGCCTACACCAAATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS CCA 90 bp GGTAGCTCAGCATCTGTCTGCAGTCAGCAGTTTGTACACCAGGGATaGATCAGCTGCCCCATGCTCCTTAGGGATTCTGGACTGGGGAAC +
Preference number: 5 (lower is better)
Translates to: GSSASVCSQQFVHQG*ISCPMLLRDSGLGN
Trigger: GTTCCCCAGTCCAGAATCCCTAAGGAGCATGGGGCAGCTGATCCATCCCTGGTGTACAAACTGCTGACTGCAGACAGATGCTGAGCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS CCA 90 bp ACGGCTGTGGCCTTGCTTCTCTCTGCTTCCATGGTCACAGGTCCCTaGCCTTGGACAGAGGAACTCAAGCTTGGGCTTGGCAGAGATTTT +
Preference number: 5 (lower is better)
Translates to: TAVALLLSASMVTGP*PWTEELKLGLGRDF
Trigger: AAAATCTCTGCCAAGCCCAAGCTTGAGTTCCTCTGTCCAAGGCCAGGGACCTGTGACCATGGAAGCAGAGAGAAGCAAGGCCACAGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp GTTAATGGTGGGGATGTAGAATGGGGCTCAACAGGCAGGGCATCCAGATGGTACGCTGAGATCGTGCCATaGCACTCCAGCATGGGCAAC +
Preference number: 5 (lower is better)
Translates to: VNGGDVEWGSTGRASRWYAEIVP*HSSMGN
Trigger: GTTGCCCATGCTGGAGTGCAATGGCACGATCTCAGC...GTACCATCTGGATGCCCTGCCTGTTGAGCCCCATTCTACATCCCCACCATTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS CCA 90 bp GGTCACAGGTCCCTGGCCTTGGACAGAGGAACTCAAGCTTGGGCTTaGCAGAGATTTTCTTCTGCTGGGCAGACTTCCCATTGTTCCTCA +
Preference number: 5 (lower is better)
Translates to: GHRSLALDRGTQAWA*QRFSSAGQTSHCSS
Trigger: TGAGGAACAATGGGAAGTCTGCCCAGCAGAAGAAAATCTCTGCCAAGCCCAAGCTTGAGTTCCTCTGTCCAAGGCCAGGGACCTGTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS CCA 90 bp GTGGCCTTGCTTCTCTCTGCTTCCATGGTCACAGGTCCCTGGCCTTaGACAGAGGAACTCAAGCTTGGGCTTGGCAGAGATTTTCTTCTG +
Preference number: 5 (lower is better)
Translates to: VALLLSASMVTGPWP*TEELKLGLGRDFLL
Trigger: CAGAAGAAAATCTCTGCCAAGCCCAAGCTTGAGTTCCTCTGTCCAAGGCCAGGGACCTGTGACCATGGAAGCAGAGAGAAGCAAGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp AGAGGAAAGAGCAAGGGTACAGGTGGGACCCTAGATGCACCTCTGTGTCCCACCCAGAGGAACTCAAGCTaGGGCTTGGCAGAGATTTTC +
Preference number: 5 (lower is better)
Translates to: RGKSKGTGGTLDAPLCPTQRNSS*GLAEIF
Trigger: GAAAATCTCTGCCAAGCCCAAGCTTGAGTTCCTCTG...GGTGGGACACAGAGGTGCATCTAGGGTCCCACCTGTACCCTTGCTCTTTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp TGTAGCTTGGGAACCAGTAGGAGCACTGGAGGGGGTGCCTCCCACCCCATCCCTGAGCTGTCATTTAATTaGATGCACCTCTGGATTCAG +
Preference number: 5 (lower is better)
Translates to: CSLGTSRSTGGGASHPIPELSFN*MHLWIQ
Trigger: CTGAATCCAGAGGTGCATCAAATTAAATGACAGCTC...AGGGATGGGGTGGGAGGCACCCCCTCCAGTGCTCCTACTGGTTCCCAAGCTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS-3UTR CAA 90 bp CATCTCAGCTTTCCTTTCCCTTCTAGGCCACAGTCCTACCTTCTGAGGTATGGTCACAGGTCCCTGGCCTaGGACAGAGGAACTCAAGCT +
Preference number: 5 (lower is better)
Translates to: HLSFPFPSRPQSYLLRYGHRSLA*DRGTQA
Trigger: AGCTTGAGTTCCTCTGTCCAAGGCCAGGGACCTGTG...ACCATACCTCAGAAGGTAGGACTGTGGCCTAGAAGGGAAAGGAAAGCTGAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp TCTGGAGGTCACATAGAGCCTGGACCATCCAAGATCTGCTGCTACGGTAAGACAAGGACACAGGGCTCCTaGAGTAGGCAGCAGATGTCA +
Preference number: 5 (lower is better)
Translates to: SGGHIEPGPSKICCYGKTRTQGS*SRQQMS
Trigger: TGACATCTGCTGCCTACTCAAGGAGCCCTGTGTCCT...TGTCTTACCGTAGCAGCAGATCTTGGATGGTCCAGGCTCTATGTGACCTCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS-3UTR CAA 90 bp CCTCTCCCTGATCCCTTAGCGGATCCAGCAGACCTCTTTCTGTTTATGGAGGCATCCAGCTCTTTCCAGTaGAGTGGTGTCCTCTGCACA +
Preference number: 5 (lower is better)
Translates to: PLPDPLADPADLFLFMEASSSFQ*SGVLCT
Trigger: TGTGCAGAGGACACCACTCAACTGGAAAGAGCTGGA...TGCCTCCATAAACAGAAAGAGGTCTGCTGGATCCGCTAAGGGATCAGGGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp GAAATCAAGGGCTGGATTTGGTGTAGGCTGTGGTCTCCGTCTTGGCATTGTGGAGTCTCCGTCTTGGCATaGTGGAGAGAGGGCTTAGCA +
Preference number: 5 (lower is better)
Translates to: EIKGWIWCRLWSPSWHCGVSVLA*WREGLA
Trigger: TGCTAAGCCCTCTCTCCACAATGCCAAGACGGAGAC...TCCACAATGCCAAGACGGAGACCACAGCCTACACCAAATCCAGCCCTTGATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS GCA 90 bp CTTGGACAGAGGAACTCAAGCTTGGGCTTGGCAGAGATTTTCTTCTaGTGGGCAGACTTCCCATTGTTCCTCAGCAGAGCACTCAGAAGC +
Preference number: 5 (lower is better)
Translates to: LGQRNSSLGLAEIFF*WADFPLFLSRALRS
Trigger: GCTTCTGAGTGCTCTGCTGAGGAACAATGGGAAGTCTGCCCAGCAGAAGAAAATCTCTGCCAAGCCCAAGCTTGAGTTCCTCTGTCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS CCA 90 bp GGACAGAGGAACTCAAGCTTGGGCTTGGCAGAGATTTTCTTCTGCTaGGCAGACTTCCCATTGTTCCTCAGCAGAGCACTCAGAAGCACA +
Preference number: 5 (lower is better)
Translates to: GQRNSSLGLAEIFFC*ADFPLFLSRALRST
Trigger: TGTGCTTCTGAGTGCTCTGCTGAGGAACAATGGGAAGTCTGCCCAGCAGAAGAAAATCTCTGCCAAGCCCAAGCTTGAGTTCCTCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp TCTGGAGGTCACATAGAGCCTGGACCATCCAAGATCTGCTGCTACGGTAAGACATCTAGGTGTGCAGCCTaGGTTTCCCTTTTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: SGGHIEPGPSKICCYGKTSRCAA*VSLLAS
Trigger: AGAGGCCAAAAGGGAAACCAAGGCTGCACACCTAGA...TGTCTTACCGTAGCAGCAGATCTTGGATGGTCCAGGCTCTATGTGACCTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp GTTGACTCTAGGGGTTGTTTCTACCTTGTGGGTGGGGCCTGGTTAATGGTGGGGCCGAAGTCTTTCTCTTaGCTCTGGAGGTCACATAGA +
Preference number: 5 (lower is better)
Translates to: VDSRGCFYLVGGAWLMVGPKSFS*LWRSHR
Trigger: TCTATGTGACCTCCAGAGCAAAGAGAAAGACTTCGG...CCCCACCATTAACCAGGCCCCACCCACAAGGTAGAAACAACCCCTAGAGTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp GCATCCAGATGGTACTGGAAACCCCAAACTCAAGAACTAACTAGGTCAGACCCCTCCAGCTCTTTCCAGTaGAGTGGTGTCCTCTGCACA +
Preference number: 5 (lower is better)
Translates to: ASRWYWKPQTQELTRSDPSSSFQ*SGVLCT
Trigger: TGTGCAGAGGACACCACTCAACTGGAAAGAGCTGGA...GGGGTCTGACCTAGTTAGTTCTTGAGTTTGGGGTTTCCAGTACCATCTGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp CATCTCAGCTTTCCTTTCCCTTCTAGGCCACAGTCCTACCTTCTGAGGTATGGTCTTTTGGCCTCTCCTTaGGGCCTAGGCATCATCCAA +
Preference number: 5 (lower is better)
Translates to: HLSFPFPSRPQSYLLRYGLLASP*GLGIIQ
Trigger: TTGGATGATGCCTAGGCCCAAAGGAGAGGCCAAAAG...ACCATACCTCAGAAGGTAGGACTGTGGCCTAGAAGGGAAAGGAAAGCTGAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp AGACATCATCTCAGCTTTCCTTTCCCTTCTAGGCCACAGTCCTACCTTCTGAGGCTTTTGGCCTCTCCTTaGGGCCTAGGCATCATCCAA +
Preference number: 5 (lower is better)
Translates to: RHHLSFPFPSRPQSYLLRLLASP*GLGIIQ
Trigger: TTGGATGATGCCTAGGCCCAAAGGAGAGGCCAAAAG...CCTCAGAAGGTAGGACTGTGGCCTAGAAGGGAAAGGAAAGCTGAGATGATGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp AGACATCATCTCAGCTTTCCTTTCCCTTCTAGGCCACAGTCCTACCTTCTGAGGTCTAGGTGTGCAGCCTaGGTTTCCCTTTTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: RHHLSFPFPSRPQSYLLRSRCAA*VSLLAS
Trigger: AGAGGCCAAAAGGGAAACCAAGGCTGCACACCTAGA...CCTCAGAAGGTAGGACTGTGGCCTAGAAGGGAAAGGAAAGCTGAGATGATGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp CATCTCAGCTTTCCTTTCCCTTCTAGGCCACAGTCCTACCTTCTGAGGTATGGTCAGAGGAACTCAAGCTaGGGCTTGGCAGAGATTTTC +
Preference number: 5 (lower is better)
Translates to: HLSFPFPSRPQSYLLRYGQRNSS*GLAEIF
Trigger: GAAAATCTCTGCCAAGCCCAAGCTTGAGTTCCTCTG...ACCATACCTCAGAAGGTAGGACTGTGGCCTAGAAGGGAAAGGAAAGCTGAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp GGCAGGGCATCCAGATGGTACTGGAAACCCCAAACTCAAGAACTAACTAGGTCAGCTGAGGCAGGAGAATaGTTTGAATCCAGGAGATGG +
Preference number: 5 (lower is better)
Translates to: GRASRWYWKPQTQELTRSAEAGE*FESRRW
Trigger: CCATCTCCTGGATTCAAACAATTCTCCTGCCTCAGC...TGACCTAGTTAGTTCTTGAGTTTGGGGTTTCCAGTACCATCTGGATGCCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp GGCAGGGCATCCAGATGGTACTGGAAACCCCAAACTCAAGAACTAACTAGGTCAAGGCAGGAGAATTGTTaGAATCCAGGAGATGGAGGT +
Preference number: 5 (lower is better)
Translates to: GRASRWYWKPQTQELTRSRQENC*NPGDGG
Trigger: ACCTCCATCTCCTGGATTCAAACAATTCTCCTGCCT...TGACCTAGTTAGTTCTTGAGTTTGGGGTTTCCAGTACCATCTGGATGCCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp AGACATCATCTCAGCTTTCCTTTCCCTTCTAGGCCACAGTCCTACCTTCTGAGGAGGCAGGAGAATTGTTaGAATCCAGGAGATGGAGGT +
Preference number: 5 (lower is better)
Translates to: RHHLSFPFPSRPQSYLLRRQENC*NPGDGG
Trigger: ACCTCCATCTCCTGGATTCAAACAATTCTCCTGCCT...CCTCAGAAGGTAGGACTGTGGCCTAGAAGGGAAAGGAAAGCTGAGATGATGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp GCATCCAGATGGTACTGGAAACCCCAAACTCAAGAACTAACTAGGTCAGACCCCTCGAGGGAAATTGGTTaGTCATCAAAGGCTTGGGAA +
Preference number: 5 (lower is better)
Translates to: ASRWYWKPQTQELTRSDPSREIG*SSKAWE
Trigger: TTCCCAAGCCTTTGATGACAAACCAATTTCCCTCGA...GGGGTCTGACCTAGTTAGTTCTTGAGTTTGGGGTTTCCAGTACCATCTGGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp TATGGTGGTGGTCTCAACGAGACTTGTAGATTTTCTGAAAATGACTTTCTCGTTAAGGCCCAGGGCCCTTaGAGCTCTGTCACAGAGACA +
Preference number: 5 (lower is better)
Translates to: YGGGLNETCRFSENDFLVKAQGP*SSVTET
Trigger: TGTCTCTGTGACAGAGCTCAAAGGGCCCTGGGCCTT...AACGAGAAAGTCATTTTCAGAAAATCTACAAGTCTCGTTGAGACCACCACCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS-3UTR CAA 90 bp AGACATCATCTCAGCTTTCCTTTCCCTTCTAGGCCACAGTCCTACCTTCTGAGGCATCATCGAGGGAAATaGGTTTGTCATCAAAGGCTT +
Preference number: 5 (lower is better)
Translates to: RHHLSFPFPSRPQSYLLRHHRGK*VCHQRL
Trigger: AAGCCTTTGATGACAAACCAATTTCCCTCGATGATG...CCTCAGAAGGTAGGACTGTGGCCTAGAAGGGAAAGGAAAGCTGAGATGATGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp TGTCCTCAATGGGGGACATTTGAGGACCTAGACTGTCCGAAGTCTTTCTCTTTGCATCATCGAGGGAAATaGGTTTGTCATCAAAGGCTT +
Preference number: 5 (lower is better)
Translates to: CPQWGTFEDLDCPKSFSLHHRGK*VCHQRL
Trigger: AAGCCTTTGATGACAAACCAATTTCCCTCGATGATG...CAAAGAGAAAGACTTCGGACAGTCTAGGTCCTCAAATGTCCCCCATTGAGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp TCAGATGAAACATTAAATTGTCTTCCTCGATTCTCCATCGGGTGTAGAGTTTTTCACAGGTCCCTGGCCTaGGACAGAGGAACTCAAGCT +
Preference number: 5 (lower is better)
Translates to: SDETLNCLPRFSIGCRVFHRSLA*DRGTQA
Trigger: AGCTTGAGTTCCTCTGTCCAAGGCCAGGGACCTGTG...AAAAACTCTACACCCGATGGAGAATCGAGGAAGACAATTTAATGTTTCATCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS-3UTR CAA 90 bp GCACAGTACATGCAGCATCTAATAAGAGTTTCCATTGTAGAATGTTTTCACATACACCCCACCTGTAGCTaGGGAACCAGTAGGAGCACT +
Preference number: 5 (lower is better)
Translates to: AQYMQHLIRVSIVECFHIHPTCS*GTSRST
Trigger: AGTGCTCCTACTGGTTCCCAAGCTACAGGTGGGGTG...TATGTGAAAACATTCTACAATGGAAACTCTTATTAGATGCTGCATGTACTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS-3UTR CAA 90 bp GGCAGGGCATCCAGATGGTACTGGAAACCCCAAACTCAAGAACTAACTAGGTCATTAATTGAGAACCTGTaGATGATACCTGATAAAGCC +
Preference number: 5 (lower is better)
Translates to: GRASRWYWKPQTQELTRSLIENL*MIPDKA
Trigger: GGCTTTATCAGGTATCATCAACAGGTTCTCAATTAA...TGACCTAGTTAGTTCTTGAGTTTGGGGTTTCCAGTACCATCTGGATGCCCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp CATCTCAGCTTTCCTTTCCCTTCTAGGCCACAGTCCTACCTTCTGAGGTATGGTTTAATTGAGAACCTGTaGATGATACCTGATAAAGCC +
Preference number: 5 (lower is better)
Translates to: HLSFPFPSRPQSYLLRYGLIENL*MIPDKA
Trigger: GGCTTTATCAGGTATCATCAACAGGTTCTCAATTAA...ACCATACCTCAGAAGGTAGGACTGTGGCCTAGAAGGGAAAGGAAAGCTGAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS-3UTR CAA 90 bp TCAGATGAAACATTAAATTGTCTTCCTCGATTCTCCATCGGGTGTAGAGTTTTTGCTGAGGCAGGAGAATaGTTTGAATCCAGGAGATGG +
Preference number: 5 (lower is better)
Translates to: SDETLNCLPRFSIGCRVFAEAGE*FESRRW
Trigger: CCATCTCCTGGATTCAAACAATTCTCCTGCCTCAGC...AAAAACTCTACACCCGATGGAGAATCGAGGAAGACAATTTAATGTTTCATCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS GCA 72 bp CTCCCCGAGTCTCAGCGACAGCTCGGCCGGGCCACCTaGCGGGAAACTGCCCAGGGCCACGGCTGTGGCCTT +
Preference number: 6 (lower is better)
Translates to: LPESQRQLGRAT*RETAQGHGCGL
Trigger: AAGGCCACAGCCGTGGCCCTGGGCAGTTTCCCGGCAGGTGGCCCGGCCGAGCTGTCGCTGAGACTCGGGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS GCA 72 bp TCAGCGACAGCTCGGCCGGGCCACCTGCCGGGAAACTaGCCAGGGCCACGGCTGTGGCCTTGCTTCTCTCTG +
Preference number: 6 (lower is better)
Translates to: SATARPGHLPGN*PGPRLWPCFSL
Trigger: CAGAGAGAAGCAAGGCCACAGCCGTGGCCCTGGGCAGTTTCCCGGCAGGTGGCCCGGCCGAGCTGTCGCTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS CCA 72 bp CGTCCACCAGTCTCCATCCTCAGAGACGATGGTCAATaGCTCCCCGAGTCTCAGCGACAGCTCGGCCGGGCC +
Preference number: 6 (lower is better)
Translates to: RPPVSILRDDGQ*LPESQRQLGRA
Trigger: GGCCCGGCCGAGCTGTCGCTGAGACTCGGGGAGCCATTGACCATCGTCTCTGAGGATGGAGACTGGTGGACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS CAA 72 bp GGGAGCGGGCCAGCCCTCTGCAGGACACAGGGCTCCTaGAGTAGGCAGCAGATGTCATCCGCCAGCTCAGAG +
Preference number: 6 (lower is better)
Translates to: GSGPALCRTQGS*SRQQMSSASSE
Trigger: CTCTGAGCTGGCGGATGACATCTGCTGCCTACTCAAGGAGCCCTGTGTCCTGCAGAGGGCTGGCCCGCTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS TCA 72 bp GATCCGGTCCCAGGATGCAGGGCGGCTGAGGCGGACTaGCAGAGAGTAAGAGCCTCTCCTGGTCTGGCTCTC +
Preference number: 6 (lower is better)
Translates to: DPVPGCRAAEAD*QRVRASPGLAL
Trigger: GAGAGCCAGACCAGGAGAGGCTCTTACTCTCTGTCAGTCCGCCTCAGCCGCCCTGCATCCTGGGACCGGATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS TCA 72 bp GGAGCGGGCCAGCCCTCTGCAGGACACAGGGCTCCTTaGGTAGGCAGCAGATGTCATCCGCCAGCTCAGAGT +
Preference number: 6 (lower is better)
Translates to: GAGQPSAGHRAP*VGSRCHPPAQS
Trigger: ACTCTGAGCTGGCGGATGACATCTGCTGCCTACTCAAGGAGCCCTGTGTCCTGCAGAGGGCTGGCCCGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS GCA 72 bp GTGTCCTCTGCACAGTCACAGGTAGGGGTATATCCTTaGCAGGGAGCGGGCCAGCCCTCTGCAGGACACAGG +
Preference number: 6 (lower is better)
Translates to: VSSAQSQVGVYP*QGAGQPSAGHR
Trigger: CCTGTGTCCTGCAGAGGGCTGGCCCGCTCCCTGGCAAGGATATACCCCTACCTGTGACTGTGCAGAGGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS CAA 90 bp CAGTTGAGTGGTGTCCTCTGCACAGTCACAGGTAGGGGTATATCCTaGCCAGGGAGCGGGCCAGCCCTCAGAGTAATGGTCCACCAGGGC +
Preference number: 6 (lower is better)
Translates to: QLSGVLCTVTGRGIS*PGSGPALRVMVHQG
Trigger: GCCCTGGTGGACCATTACTCTGAGGGCTGGCCCGCTCCCTGGCAAGGATATACCCCTACCTGTGACTGTGCAGAGGACACCACTCAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360672.2
CDS TCA 72 bp GAGAGTAAGAGCCTCTCCTGGTCTGGCTCTCCCGGATaGGGAAGGCCCCTCCAGGGTTCCCAGGTAACAACA +
Preference number: 6 (lower is better)
Translates to: ESKSLSWSGSPG*GRPLQGSQVTT
Trigger: TGTTGTTACCTGGGAACCCTGGAGGGGCCTTCCTCATCCGGGAGAGCCAGACCAGGAGAGGCTCTTACTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS CAA 72 bp GGTGTCCTCTGCACAGTCACAGGTAGGGGTATATCCTaGCCAGGGAGCGGGCCAGCCCTCAGAGTAATGGTC +
Preference number: 6 (lower is better)
Translates to: GVLCTVTGRGIS*PGSGPALRVMV
Trigger: GACCATTACTCTGAGGGCTGGCCCGCTCCCTGGCAAGGATATACCCCTACCTGTGACTGTGCAGAGGACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360672.2
CDS TCA 72 bp GGCCACGTGGACGCTGGGGATGTTATACTCTCTGCCTaGGACTTCAGACAGCACCGTCCACCAGTCTCCATC +
Preference number: 6 (lower is better)
Translates to: GHVDAGDVILSA*DFRQHRPPVSI
Trigger: GATGGAGACTGGTGGACGGTGCTGTCTGAAGTCTCAGGCAGAGAGTATAACATCCCCAGCGTCCACGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS CCA 72 bp TGCTCAGGCCCTCATACAGCCACCCATGGGAGACTTTaGCCACGTGGACGCTGGGGATGTTATACTCTCTGC +
Preference number: 6 (lower is better)
Translates to: CSGPHTATHGRL*PRGRWGCYTLC
Trigger: GCAGAGAGTATAACATCCCCAGCGTCCACGTGGCCAAAGTCTCCCATGGGTGGCTGTATGAGGGCCTGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS CAA 72 bp CTGCTCAGGCCCTCATACAGCCACCCATGGGAGACTTaGGCCACGTGGACGCTGGGGATGTTATACTCTCTG +
Preference number: 6 (lower is better)
Translates to: LLRPSYSHPWET*ATWTLGMLYSL
Trigger: CAGAGAGTATAACATCCCCAGCGTCCACGTGGCCAAAGTCTCCCATGGGTGGCTGTATGAGGGCCTGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS CCA 72 bp CCCTCATACAGCCACCCATGGGAGACTTTGGCCACGTaGACGCTGGGGATGTTATACTCTCTGCCTGAGACT +
Preference number: 6 (lower is better)
Translates to: PSYSHPWETLAT*TLGMLYSLPET
Trigger: AGTCTCAGGCAGAGAGTATAACATCCCCAGCGTCCACGTGGCCAAAGTCTCCCATGGGTGGCTGTATGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS CAA 72 bp GCTTCTCTCTGCTTCCATGGTCACAGGTCCCTGGCCTaGGACAGAGGAACTCAAGCTTGGGCTTGGCAGAGA +
Preference number: 6 (lower is better)
Translates to: ASLCFHGHRSLA*DRGTQAWAWQR
Trigger: TCTCTGCCAAGCCCAAGCTTGAGTTCCTCTGTCCAAGGCCAGGGACCTGTGACCATGGAAGCAGAGAGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS CCA 72 bp CACAGGTCCCTGGCCTTGGACAGAGGAACTCAAGCTTaGGCTTGGCAGAGATTTTCTTCTGCTGGGCAGACT +
Preference number: 6 (lower is better)
Translates to: HRSLALDRGTQA*AWQRFSSAGQT
Trigger: AGTCTGCCCAGCAGAAGAAAATCTCTGCCAAGCCCAAGCTTGAGTTCCTCTGTCCAAGGCCAGGGACCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS CCA 72 bp CTTCTCTCTGCTTCCATGGTCACAGGTCCCTGGCCTTaGACAGAGGAACTCAAGCTTGGGCTTGGCAGAGAT +
Preference number: 6 (lower is better)
Translates to: LLSASMVTGPWP*TEELKLGLGRD
Trigger: ATCTCTGCCAAGCCCAAGCTTGAGTTCCTCTGTCCAAGGCCAGGGACCTGTGACCATGGAAGCAGAGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS CCA 72 bp ACAGCCACCCATGGGAGACTTTGGCCACGTGGACGCTaGGGATGTTATACTCTCTGCCTGAGACTTCAGACA +
Preference number: 6 (lower is better)
Translates to: TATHGRLWPRGR*GCYTLCLRLQT
Trigger: TGTCTGAAGTCTCAGGCAGAGAGTATAACATCCCCAGCGTCCACGTGGCCAAAGTCTCCCATGGGTGGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS CAA 72 bp GTTTGGGTAGCTCAGCATCTGTCTGCAGTCAGCAGTTaGTACACCAGGGATGGATCAGCTGCCCCATGCTCC +
Preference number: 6 (lower is better)
Translates to: VWVAQHLSAVSS*YTRDGSAAPCS
Trigger: GGAGCATGGGGCAGCTGATCCATCCCTGGTGTACAAACTGCTGACTGCAGACAGATGCTGAGCTACCCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS CAA 72 bp TCACAGGTCCCTGGCCTTGGACAGAGGAACTCAAGCTaGGGCTTGGCAGAGATTTTCTTCTGCTGGGCAGAC +
Preference number: 6 (lower is better)
Translates to: SQVPGLGQRNSS*GLAEIFFCWAD
Trigger: GTCTGCCCAGCAGAAGAAAATCTCTGCCAAGCCCAAGCTTGAGTTCCTCTGTCCAAGGCCAGGGACCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS CAA 90 bp CTCTCTCAGCCTGGGAGGATCTTCAGGGAGAGGCTAGGTGTTGGTTaGGGTAGCTCAGCATCTGTCTGCAGTCAGCAGTTTGTACACCAG +
Preference number: 6 (lower is better)
Translates to: LSQPGRIFRERLGVG*GSSASVCSQQFVHQ
Trigger: CTGGTGTACAAACTGCTGACTGCAGACAGATGCTGAGCTACCCAAACCAACACCTAGCCTCTCCCTGAAGATCCTCCCAGGCTGAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS CAA 90 bp TGGTCACAGGTCCCTGGCCTTGGACAGAGGAACTCAAGCTTGGGCTaGGCAGAGATTTTCTTCTGCTGGGCAGACTTCCCATTGTTCCTC +
Preference number: 6 (lower is better)
Translates to: WSQVPGLGQRNSSLG*AEIFFCWADFPLFL
Trigger: GAGGAACAATGGGAAGTCTGCCCAGCAGAAGAAAATCTCTGCCAAGCCCAAGCTTGAGTTCCTCTGTCCAAGGCCAGGGACCTGTGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS CCA 72 bp TCCCTGGCCTTGGACAGAGGAACTCAAGCTTGGGCTTaGCAGAGATTTTCTTCTGCTGGGCAGACTTCCCAT +
Preference number: 6 (lower is better)
Translates to: SLALDRGTQAWA*QRFSSAGQTSH
Trigger: ATGGGAAGTCTGCCCAGCAGAAGAAAATCTCTGCCAAGCCCAAGCTTGAGTTCCTCTGTCCAAGGCCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS CAA 72 bp CCTGGGAGGATCTTCAGGGAGAGGCTAGGTGTTGGTTaGGGTAGCTCAGCATCTGTCTGCAGTCAGCAGTTT +
Preference number: 6 (lower is better)
Translates to: PGRIFRERLGVG*GSSASVCSQQF
Trigger: AAACTGCTGACTGCAGACAGATGCTGAGCTACCCAAACCAACACCTAGCCTCTCCCTGAAGATCCTCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262866.9
CDS CAA 72 bp TCAGAAAACAGGAGGGAGCTGTCCAGCTCTTTCCAGTaGAGTGGTGTCCTCTGCACAGTCACAGGTAGGGGT +
Preference number: 6 (lower is better)
Translates to: SENRRELSSSFQ*SGVLCTVTGRG
Trigger: ACCCCTACCTGTGACTGTGCAGAGGACACCACTCAACTGGAAAGAGCTGGACAGCTCCCTCCTGTTTTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS CAA 90 bp TGTGGCCTTGCTTCTCTCTGCTTCCATGGTCACAGGTCCCTGGCCTaGGACAGAGGAACTCAAGCTTGGGCTTGGCAGAGATTTTCTTCT +
Preference number: 6 (lower is better)
Translates to: CGLASLCFHGHRSLA*DRGTQAWAWQRFSS
Trigger: AGAAGAAAATCTCTGCCAAGCCCAAGCTTGAGTTCCTCTGTCCAAGGCCAGGGACCTGTGACCATGGAAGCAGAGAGAAGCAAGGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS CCA 72 bp AACTCAAGCTTGGGCTTGGCAGAGATTTTCTTCTGCTaGGCAGACTTCCCATTGTTCCTCAGCAGAGCACTC +
Preference number: 6 (lower is better)
Translates to: NSSLGLAEIFFC*ADFPLFLSRAL
Trigger: GAGTGCTCTGCTGAGGAACAATGGGAAGTCTGCCCAGCAGAAGAAAATCTCTGCCAAGCCCAAGCTTGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2
CDS CAA 90 bp AGCTTGGGCTTGGCAGAGATTTTCTTCTGCTGGGCAGACTTCCCATaGTTCCTCAGCAGAGCACTCAGAAGCACATCATCGAGGGAAATT +
Preference number: 6 (lower is better)
Translates to: SLGLAEIFFCWADFP*FLSRALRSTSSREI
Trigger: AATTTCCCTCGATGATGTGCTTCTGAGTGCTCTGCTGAGGAACAATGGGAAGTCTGCCCAGCAGAAGAAAATCTCTGCCAAGCCCAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262866.9
ENST00000360672.2