RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLA (Homo sapiens)

Ensembl gene IDs: ENSG00000155926

Ensembl transcript IDs: ENST00000338087.10, ENST00000395352.7, ENST00000427060.6, ENST00000517549.1, ENST00000517615.1, ENST00000517648.5, ENST00000517932.1, ENST00000518565.5, ENST00000518594.1, ENST00000519341.5, ENST00000519504.5, ENST00000519558.5, ENST00000519747.5, ENST00000520106.5, ENST00000521302.5, ENST00000521823.5, ENST00000522002.5, ENST00000522119.5, ENST00000522432.5, ENST00000522946.5, ENST00000523224.5, ENST00000523610.5, ENST00000524345.5

Found 502 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTCTGTCTGCGCTGCAAAGCCATGGCTGCAGACATCAGGGAAGCTaGTGCAGTTCTAGTCTCGCCTCCTCGATTTCCCTGCCAGCAGTC +
Preference number: 1 (lower is better)
Translates to: ALSALQSHGCRHQGS*CSSSLASSISLPAV
Trigger: GACTGCTGGCAGGGAAATCGAGGAGGCGAGACTAGAACTGCACCAGCTTCCCTGATGTCTGCAGCCATGGCTTTGCAGCGCAGACAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR GCA 90 bp CTGTCTGCGCTGCAAAGCCATGGCTGCAGACATCAGGGAAGCTGGTaGAGTTCTAGTCTCGCCTCCTCGATTTCCCTGCCAGCAGTCTTC +
Preference number: 1 (lower is better)
Translates to: LSALQSHGCRHQGSW*SSSLASSISLPAVF
Trigger: GAAGACTGCTGGCAGGGAAATCGAGGAGGCGAGACTAGAACTGCACCAGCTTCCCTGATGTCTGCAGCCATGGCTTTGCAGCGCAGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR TCA 90 bp CTCTCTCTCATTCTTCTGGCCCTCTGCAGAACCAGGGAGGCCAACTaGCTTCCACCCATATGGCTTTGGTGCAGGAGCAGACCAAAGGTA +
Preference number: 1 (lower is better)
Translates to: LSLILLALCRTREAN*LPPIWLWCRSRPKV
Trigger: TACCTTTGGTCTGCTCCTGCACCAAAGCCATATGGGTGGAAGTCAGTTGGCCTCCCTGGTTCTGCAGAGGGCCAGAAGAATGAGAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR TCA 90 bp GTTTCCTCTCCCTCTCAGGCTTGCCCATACAGAAGTTCTCTCCAATaGCCTTGGAGTGTAACTGTCTGGACAGGTCCAGTTCCTTGGAGA +
Preference number: 1 (lower is better)
Translates to: VSSPSQACPYRSSLQ*PWSVTVWTGPVPWR
Trigger: TCTCCAAGGAACTGGACCTGTCCAGACAGTTACACTCCAAGGTCATTGGAGAGAACTTCTGTATGGGCAAGCCTGAGAGGGAGAGGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR CCA 90 bp ATTCGTCACAACGGAAAACAACACATAAGATACTGTGCAGACATCTaGAGTTCAGGGGGTCACCCTGCCTTATGCGGGAAGTCAATGTCC +
Preference number: 1 (lower is better)
Translates to: IRHNGKQHIRYCADI*SSGGHPALCGKSMS
Trigger: GGACATTGACTTCCCGCATAAGGCAGGGTGACCCCCTGAACTCCAGATGTCTGCACAGTATCTTATGTGTTGTTTTCCGTTGTGACGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338087.10
3UTR GCA 90 bp AGATACTGTGCAGACATCTGGAGTTCAGGGGGTCACCCTGCCTTATaGGGGAAGTCAATGTCCACAGTGTTACATTCATTTCTCATACGT +
Preference number: 1 (lower is better)
Translates to: RYCADIWSSGGHPAL*GKSMSTVLHSFLIR
Trigger: ACGTATGAGAAATGAATGTAACACTGTGGACATTGACTTCCCGCATAAGGCAGGGTGACCCCCTGAACTCCAGATGTCTGCACAGTATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338087.10
3UTR TCA 90 bp GGAGGGGTTCCTTTGGTCATGATGTGGATAGAGAAGATGCGAATTTaGGTCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGAGGCT +
Preference number: 1 (lower is better)
Translates to: GGVPLVMMWIEKMRI*VSMWLLLASKIREA
Trigger: AGCCTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGACTCAAATTCGCATCTTCTCTATCCACATCATGACCAAAGGAACCCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR GCA 90 bp ACACATAAGATACTGTGCAGACATCTGGAGTTCAGGGGGTCACCCTaGCTTATGCGGGAAGTCAATGTCCACAGTGTTACATTCATTTCT +
Preference number: 1 (lower is better)
Translates to: THKILCRHLEFRGSP*LMREVNVHSVTFIS
Trigger: AGAAATGAATGTAACACTGTGGACATTGACTTCCCGCATAAGGCAGGGTGACCCCCTGAACTCCAGATGTCTGCACAGTATCTTATGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338087.10
3UTR TCA 90 bp TGTCCACAGTGTTACATTCATTTCTCATACGTTGGCTGGTTCCTTTaGAATAGCCTTTTGGAACGGTTGGGGAAACCACAGATGTCTCCT +
Preference number: 1 (lower is better)
Translates to: CPQCYIHFSYVGWFL*NSLLERLGKPQMSP
Trigger: AGGAGACATCTGTGGTTTCCCCAACCGTTCCAAAAGGCTATTTCAAAGGAACCAGCCAACGTATGAGAAATGAATGTAACACTGTGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338087.10
3UTR-3UTR TCA 90 bp CATCCCAGAGAAGCTCTGTCTGCGCTGCAAAGCCATGGCTGCAGACATCAGGGAGTGATGCCACAGCCCTaGTCAGACACCAGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: HPREALSALQSHGCRHQGVMPQP*SDTREG
Trigger: CCCCTCCCTGGTGTCTGATCAGGGCTGTGGCATCAC...TCCCTGATGTCTGCAGCCATGGCTTTGCAGCGCAGACAGAGCTTCTCTGGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR-3UTR CCA 90 bp GCTTTCCACCAGCCCCCTTCATCAGAAATCACACGCAGTTTCTCCCCTCGGCGGGTCGCTATCCAGTCCTaGAGGCAGCGCAGGAACCTG +
Preference number: 2 (lower is better)
Translates to: AFHQPPSSEITRSFSPRRVAIQS*RQRRNL
Trigger: CAGGTTCCTGCGCTGCCTCCAGGACTGGATAGCGAC...CCGCCGAGGGGAGAAACTGCGTGTGATTTCTGATGAAGGGGGCTGGTGGAAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522432.5
3UTR-3UTR GCA 90 bp GCAGACATCAGGGAAGCTGGTGCAGTTCTAGTCTCGCCTCCTCGATTTCCCTGCATTCTTCTGGCCCTCTaGAGAACCAGGGAGGCCAAC +
Preference number: 2 (lower is better)
Translates to: ADIREAGAVLVSPPRFPCILLAL*RTREAN
Trigger: GTTGGCCTCCCTGGTTCTGCAGAGGGCCAGAAGAAT...GCAGGGAAATCGAGGAGGCGAGACTAGAACTGCACCAGCTTCCCTGATGTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR-3UTR TCA 90 bp TTTCCTCTCCCTCTCAGGCTTGCCCATACAGAAGTTCTCTCCAATGACCTTGGAGTGATGCCACAGCCCTaGTCAGACACCAGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: FPLPLRLAHTEVLSNDLGVMPQP*SDTREG
Trigger: CCCCTCCCTGGTGTCTGATCAGGGCTGTGGCATCAC...TCCAAGGTCATTGGAGAGAACTTCTGTATGGGCAAGCCTGAGAGGGAGAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR-3UTR CCA 90 bp TGGAGTTCAGGGGGTCACCCTGCCTTATGCGGGAAGTCAATGTCCACAGTGTTAACAGGTCCAGTTCCTTaGAGAGCAGTCCTGGTGCCC +
Preference number: 2 (lower is better)
Translates to: WSSGGHPALCGKSMSTVLTGPVP*RAVLVP
Trigger: GGGCACCAGGACTGCTCTCCAAGGAACTGGACCTGT...TAACACTGTGGACATTGACTTCCCGCATAAGGCAGGGTGACCCCCTGAACTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338087.10
3UTR-3UTR CCA 90 bp GCAGACATCAGGGAAGCTGGTGCAGTTCTAGTCTCGCCTCCTCGATTTCCCTGCCCACCCATATGGCTTTaGTGCAGGAGCAGACCAAAG +
Preference number: 2 (lower is better)
Translates to: ADIREAGAVLVSPPRFPCPPIWL*CRSRPK
Trigger: CTTTGGTCTGCTCCTGCACCAAAGCCATATGGGTGG...GCAGGGAAATCGAGGAGGCGAGACTAGAACTGCACCAGCTTCCCTGATGTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR CAA 90 bp CCTCTGCAGAACCAGGGAGGCCAACTGACTTCCACCCATATGGCTTaGGTGCAGGAGCAGACCAAAGGTATCTCCCAATTGAAGGCTAAG +
Preference number: 2 (lower is better)
Translates to: PLQNQGGQLTSTHMA*VQEQTKGISQLKAK
Trigger: CTTAGCCTTCAATTGGGAGATACCTTTGGTCTGCTCCTGCACCAAAGCCATATGGGTGGAAGTCAGTTGGCCTCCCTGGTTCTGCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR-3UTR TCA 90 bp CGTGATGCCACAGCCCTGATCAGACACCAGGGAGGGGTTCCTTTGGTCATGATGGAGAAGATGCGAATTTaGGTCTCCATGTGGCTTCTC +
Preference number: 2 (lower is better)
Translates to: RDATALIRHQGGVPLVMMEKMRI*VSMWLL
Trigger: GAGAAGCCACATGGAGACTCAAATTCGCATCTTCTC...CATCATGACCAAAGGAACCCCTCCCTGGTGTCTGATCAGGGCTGTGGCATCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR CAA 90 bp CTCTCCCTCTCAGGCTTGCCCATACAGAAGTTCTCTCCAATGACCTaGGAGTGTAACTGTCTGGACAGGTCCAGTTCCTTGGAGAGCAGT +
Preference number: 2 (lower is better)
Translates to: LSLSGLPIQKFSPMT*ECNCLDRSSSLESS
Trigger: ACTGCTCTCCAAGGAACTGGACCTGTCCAGACAGTTACACTCCAAGGTCATTGGAGAGAACTTCTGTATGGGCAAGCCTGAGAGGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR-3UTR TCA 90 bp CATCCCAGAGAAGCTCTGTCTGCGCTGCAAAGCCATGGCTGCAGACATCAGGGAAGAAGTTCTCTCCAATaGCCTTGGAGTGTAACTGTC +
Preference number: 2 (lower is better)
Translates to: HPREALSALQSHGCRHQGRSSLQ*PWSVTV
Trigger: GACAGTTACACTCCAAGGTCATTGGAGAGAACTTCT...TCCCTGATGTCTGCAGCCATGGCTTTGCAGCGCAGACAGAGCTTCTCTGGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR-3UTR GCA 90 bp TCATTCTTCTGGCCCTCTGCAGAACCAGGGAGGCCAACTGACTTCCACCCATATTCTCCCTCTCAGGCTTaGCCATACAGAAGTTCTCTC +
Preference number: 2 (lower is better)
Translates to: SFFWPSAEPGRPTDFHPYSPSQA*PYRSSL
Trigger: GAGAGAACTTCTGTATGGGCAAGCCTGAGAGGGAGA...ATATGGGTGGAAGTCAGTTGGCCTCCCTGGTTCTGCAGAGGGCCAGAAGAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR-3UTR GCA 90 bp CATACCAGTAGCACGATGAGCTCAGATGGACGGAATGCTTATGTGAGCAGACAGAAGCTCTGTCTGCGCTaGAAAGCCATGGCTGCAGAC +
Preference number: 2 (lower is better)
Translates to: HTSSTMSSDGRNAYVSRQKLCLR*KAMAAD
Trigger: GTCTGCAGCCATGGCTTTGCAGCGCAGACAGAGCTT...CTGTCTGCTCACATAAGCATTCCGTCCATCTGAGCTCATCGTGCTACTGGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338087.10
3UTR-3UTR TCA 90 bp CATCAGGGAAGCTGGTGCAGTTCTAGTCTCGCCTCCTCGATTTCCCTGCCAGCATGTTCCTTTTGGGCATaGACCATTGTGTCTGTTCTT +
Preference number: 2 (lower is better)
Translates to: HQGSWCSSSLASSISLPACSFWA*TIVSVL
Trigger: AAGAACAGACACAATGGTTCATGCCCAAAAGGAACA...TGCTGGCAGGGAAATCGAGGAGGCGAGACTAGAACTGCACCAGCTTCCCTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR-3UTR TCA 90 bp CTGGGCTCTTCCAAGCATCGCCCGACATGTCATGATCCAATGTTTCGTGATGCCGAGAAGATGCGAATTTaGGTCTCCATGTGGCTTCTC +
Preference number: 2 (lower is better)
Translates to: LGSSKHRPTCHDPMFRDAEKMRI*VSMWLL
Trigger: GAGAAGCCACATGGAGACTCAAATTCGCATCTTCTC...GGCATCACGAAACATTGGATCATGACATGTCGGGCGATGCTTGGAAGAGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR-3UTR GCA 90 bp ATGGCTTTGGTGCAGGAGCAGACCAAAGGTATCTCCCAATTGAAGGCTAAGAAGTTCAGGGCACCCATCTaGAAACCCAGACCTTCTGCC +
Preference number: 2 (lower is better)
Translates to: MALVQEQTKGISQLKAKKFRAPI*KPRPSA
Trigger: GGCAGAAGGTCTGGGTTTGCAGATGGGTGCCCTGAA...CTTCTTAGCCTTCAATTGGGAGATACCTTTGGTCTGCTCCTGCACCAAAGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR-3UTR CCA 90 bp AGTTCTAGTCTCGCCTCCTCGATTTCCCTGCCAGCAGTCTTCCTCTCTCTCATTTGGAGTGTAACTGTCTaGACAGGTCCAGTTCCTTGG +
Preference number: 2 (lower is better)
Translates to: SSSLASSISLPAVFLSLIWSVTV*TGPVPW
Trigger: CCAAGGAACTGGACCTGTCCAGACAGTTACACTCCA...AATGAGAGAGAGGAAGACTGCTGGCAGGGAAATCGAGGAGGCGAGACTAGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR-3UTR TCA 90 bp GCTCTTCCAAGCATCGCCCGACATGTCATGATCCAATGTTTCGTGATGCCACAGGAGAAGATGCGAATTTaGGTCTCCATGTGGCTTCTC +
Preference number: 2 (lower is better)
Translates to: ALPSIARHVMIQCFVMPQEKMRI*VSMWLL
Trigger: GAGAAGCCACATGGAGACTCAAATTCGCATCTTCTC...CTGTGGCATCACGAAACATTGGATCATGACATGTCGGGCGATGCTTGGAAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR-3UTR TCA 90 bp ATGGCTTTGGTGCAGGAGCAGACCAAAGGTATCTCCCAATTGAAGGCTAAGAAGTGGTGCCCTTTCTTGTaGGAGTGGCTTTGTCCTTCC +
Preference number: 2 (lower is better)
Translates to: MALVQEQTKGISQLKAKKWCPFL*EWLCPS
Trigger: GGAAGGACAAAGCCACTCTCACAAGAAAGGGCACCA...CTTCTTAGCCTTCAATTGGGAGATACCTTTGGTCTGCTCCTGCACCAAAGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR-3UTR GCA 90 bp GGATTTGGATGGGAGCTTCTCCTTCTCTGGCTATACATTGTGTTTTCTCCCTTGCATCAGGGAAGCTGGTaGAGTTCTAGTCTCGCCTCC +
Preference number: 2 (lower is better)
Translates to: GFGWELLLLWLYIVFSPLHQGSW*SSSLAS
Trigger: GGAGGCGAGACTAGAACTGCACCAGCTTCCCTGATG...CAAGGGAGAAAACACAATGTATAGCCAGAGAAGGAGAAGCTCCCATCCAAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338087.10
3UTR-3UTR TCA 90 bp CCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACTTGTTCCTTTTGGGCATaGACCATTGTGTCTGTTCTT +
Preference number: 2 (lower is better)
Translates to: PRDQGTSLFARSQAIVGTCSFWA*TIVSVL
Trigger: AAGAACAGACACAATGGTTCATGCCCAAAAGGAACA...AGTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
3UTR-3UTR TCA 90 bp TCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACTGTTCCTTTTGGGCATaGACCATTGTGTCTGTTCTT +
Preference number: 2 (lower is better)
Translates to: SQGSGNLAFRKIPGNSWNCSFWA*TIVSVL
Trigger: AAGAACAGACACAATGGTTCATGCCCAAAAGGAACA...GTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
3UTR-3UTR TCA 90 bp GGATTTGGATGGGAGCTTCTCCTTCTCTGGCTATACATTGTGTTTTCTCCCTTGTGGAAAATGAGCTCCTaGGTGTCCCTCACCTGTCTC +
Preference number: 2 (lower is better)
Translates to: GFGWELLLLWLYIVFSPLWKMSS*VSLTCL
Trigger: GAGACAGGTGAGGGACACTCAGGAGCTCATTTTCCA...CAAGGGAGAAAACACAATGTATAGCCAGAGAAGGAGAAGCTCCCATCCAAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338087.10
3UTR-3UTR GCA 90 bp CATACCAGTAGCACGATGAGCTCAGATGGACGGAATGCTTATGTGAGCAGACAGGTGTGCATACATACATaGTGGGCTCTTCCAAGCATC +
Preference number: 2 (lower is better)
Translates to: HTSSTMSSDGRNAYVSRQVCIHT*WALPSI
Trigger: GATGCTTGGAAGAGCCCAGCATGTATGTATGCACAC...CTGTCTGCTCACATAAGCATTCCGTCCATCTGAGCTCATCGTGCTACTGGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338087.10
3UTR-3UTR GCA 90 bp TTTCCTCTCCCTCTCAGGCTTGCCCATACAGAAGTTCTCTCCAATGACCTTGGAGTGTGCATACATACATaGTGGGCTCTTCCAAGCATC +
Preference number: 2 (lower is better)
Translates to: FPLPLRLAHTEVLSNDLGVCIHT*WALPSI
Trigger: GATGCTTGGAAGAGCCCAGCATGTATGTATGCACAC...TCCAAGGTCATTGGAGAGAACTTCTGTATGGGCAAGCCTGAGAGGGAGAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR-3UTR CCA 90 bp TTAGTTAAAGTAGTTCCATTCAGGGCACCCATCTGCAAACCCAGACCTTCTGCCTGCATACATACATGCTaGGCTCTTCCAAGCATCGCC +
Preference number: 2 (lower is better)
Translates to: LVKVVPFRAPICKPRPSACIHTC*ALPSIA
Trigger: GGCGATGCTTGGAAGAGCCCAGCATGTATGTATGCA...GGCAGAAGGTCTGGGTTTGCAGATGGGTGCCCTGAATGGAACTACTTTAACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR-3UTR TCA 90 bp AGTTCTAGTCTCGCCTCCTCGATTTCCCTGCCAGCAGTCTTCCTCTCTCTCATTTGTTCCTTTTGGGCATaGACCATTGTGTCTGTTCTT +
Preference number: 2 (lower is better)
Translates to: SSSLASSISLPAVFLSLICSFWA*TIVSVL
Trigger: AAGAACAGACACAATGGTTCATGCCCAAAAGGAACA...AATGAGAGAGAGGAAGACTGCTGGCAGGGAAATCGAGGAGGCGAGACTAGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR-3UTR CCA 90 bp TGGAGTTCAGGGGGTCACCCTGCCTTATGCGGGAAGTCAATGTCCACAGTGTTACCTTTGGTCATGATGTaGATAGAGAAGATGCGAATT +
Preference number: 2 (lower is better)
Translates to: WSSGGHPALCGKSMSTVLPLVMM*IEKMRI
Trigger: AATTCGCATCTTCTCTATCCACATCATGACCAAAGG...TAACACTGTGGACATTGACTTCCCGCATAAGGCAGGGTGACCCCCTGAACTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338087.10
3UTR-3UTR CCA 90 bp TCATTCTTCTGGCCCTCTGCAGAACCAGGGAGGCCAACTGACTTCCACCCATATCCTTTGGTCATGATGTaGATAGAGAAGATGCGAATT +
Preference number: 2 (lower is better)
Translates to: SFFWPSAEPGRPTDFHPYPLVMM*IEKMRI
Trigger: AATTCGCATCTTCTCTATCCACATCATGACCAAAGG...ATATGGGTGGAAGTCAGTTGGCCTCCCTGGTTCTGCAGAGGGCCAGAAGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR CAA 90 bp ACCCATATGGCTTTGGTGCAGGAGCAGACCAAAGGTATCTCCCAATaGAAGGCTAAGAAGTCCTTTGGGCTAATGTTTAGTGTCACGAAG +
Preference number: 2 (lower is better)
Translates to: THMALVQEQTKGISQ*KAKKSFGLMFSVTK
Trigger: CTTCGTGACACTAAACATTAGCCCAAAGGACTTCTTAGCCTTCAATTGGGAGATACCTTTGGTCTGCTCCTGCACCAAAGCCATATGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR-3UTR TCA 90 bp TTTGAGTCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGAGGCTCCCAGGGTGTTCCTTTTGGGCATaGACCATTGTGTCTGTTCTT +
Preference number: 2 (lower is better)
Translates to: FESPCGFSWLLKYVRLPGCSFWA*TIVSVL
Trigger: AAGAACAGACACAATGGTTCATGCCCAAAAGGAACA...CCCTGGGAGCCTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGACTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000524345.5
3UTR-3UTR GCA 90 bp GCAATAAATGAATACTTGATGCATTCATACAGGCAAGAATCCCAGCATCCCAGACATCAGGGAAGCTGGTaGAGTTCTAGTCTCGCCTCC +
Preference number: 2 (lower is better)
Translates to: AINEYLMHSYRQESQHPRHQGSW*SSSLAS
Trigger: GGAGGCGAGACTAGAACTGCACCAGCTTCCCTGATG...TCTGGGATGCTGGGATTCTTGCCTGTATGAATGCATCAAGTATTCATTTATTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR-3UTR CCA 90 bp AGTTCTAGTCTCGCCTCCTCGATTTCCCTGCCAGCAGTCTTCCTCTCTCTCATTCCTTTGGTCATGATGTaGATAGAGAAGATGCGAATT +
Preference number: 2 (lower is better)
Translates to: SSSLASSISLPAVFLSLIPLVMM*IEKMRI
Trigger: AATTCGCATCTTCTCTATCCACATCATGACCAAAGG...AATGAGAGAGAGGAAGACTGCTGGCAGGGAAATCGAGGAGGCGAGACTAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR-3UTR CCA 90 bp GCAATAAATGAATACTTGATGCATTCATACAGGCAAGAATCCCAGCATCCCAGAAGACATCAGGGAAGCTaGTGCAGTTCTAGTCTCGCC +
Preference number: 2 (lower is better)
Translates to: AINEYLMHSYRQESQHPRRHQGS*CSSSLA
Trigger: GGCGAGACTAGAACTGCACCAGCTTCCCTGATGTCT...TCTGGGATGCTGGGATTCTTGCCTGTATGAATGCATCAAGTATTCATTTATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR CAA 90 bp ATGCGGGAAGTCAATGTCCACAGTGTTACATTCATTTCTCATACGTaGGCTGGTTCCTTTGAAATAGCCTTTTGGAACGGTTGGGGAAAC +
Preference number: 2 (lower is better)
Translates to: MREVNVHSVTFISHT*AGSFEIAFWNGWGN
Trigger: GTTTCCCCAACCGTTCCAAAAGGCTATTTCAAAGGAACCAGCCAACGTATGAGAAATGAATGTAACACTGTGGACATTGACTTCCCGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338087.10
3UTR-3UTR GCA 90 bp GGACGGAATGCTTATGTGAGCAGACAGACAGGGAGAGATACTGCAAGCATGTTCTTTTCCTCATATGGATaGCAGACCCTTCTTAGAATA +
Preference number: 2 (lower is better)
Translates to: GRNAYVSRQTGRDTASMFFSSYG*QTLLRI
Trigger: TATTCTAAGAAGGGTCTGGCATCCATATGAGGAAAA...GAACATGCTTGCAGTATCTCTCCCTGTCTGTCTGCTCACATAAGCATTCCGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338087.10
3UTR-3UTR CCA 90 bp TTGGAACGGTTGGGGAAACCACAGATGTCTCCTTGTATAAACACACTAGAATCTTGTGAACACCTCTGTTaGGGGTTAGGACTTACGCAT +
Preference number: 2 (lower is better)
Translates to: LERLGKPQMSPCINTLESCEHLC*GLGLTH
Trigger: ATGCGTAAGTCCTAACCCCCAACAGAGGTGTTCACA...AGATTCTAGTGTGTTTATACAAGGAGACATCTGTGGTTTCCCCAACCGTTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338087.10
3UTR CAA 90 bp TACAGAGGACTTAATGCAATGCCTATTCGGGCAATAAATGAATACTaGATGCATTCATACAGGCAAGAATCCCAGCATCCCAGAGAAGCT +
Preference number: 2 (lower is better)
Translates to: YRGLNAMPIRAINEY*MHSYRQESQHPREA
Trigger: AGCTTCTCTGGGATGCTGGGATTCTTGCCTGTATGAATGCATCAAGTATTCATTTATTGCCCGAATAGGCATTGCATTAAGTCCTCTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR CAA 90 bp GGATGGGAGCTTCTCCTTCTCTGGCTATACATTGTGTTTTCTCCCTaGTCTCTTAAAATTATGCATGACATCATTAATCCACTTGGACTC +
Preference number: 2 (lower is better)
Translates to: GWELLLLWLYIVFSP*SLKIMHDIINPLGL
Trigger: GAGTCCAAGTGGATTAATGATGTCATGCATAATTTTAAGAGACAAGGGAGAAAACACAATGTATAGCCAGAGAAGGAGAAGCTCCCATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338087.10
3UTR-3UTR GCA 90 bp TCTCTTAAAATTATGCATGACATCATTAATCCACTTGGACTCCCCATCTTTCCTCACACACACAATGTGTaGATACATACATGCTGGGCT +
Preference number: 2 (lower is better)
Translates to: SLKIMHDIINPLGLPIFPHTHNV*IHTCWA
Trigger: AGCCCAGCATGTATGTATGCACACATTGTGTGTGTG...AGGAAAGATGGGGAGTCCAAGTGGATTAATGATGTCATGCATAATTTTAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338087.10
3UTR-3UTR CAA 90 bp CATCAGGGAAGCTGGTGCAGTTCTAGTCTCGCCTCCTCGATTTCCCTGCCAGCAGACAGGTCCAGTTCCTaGGAGAGCAGTCCTGGTGCC +
Preference number: 3 (lower is better)
Translates to: HQGSWCSSSLASSISLPADRSSS*ESSPGA
Trigger: GGCACCAGGACTGCTCTCCAAGGAACTGGACCTGTC...TGCTGGCAGGGAAATCGAGGAGGCGAGACTAGAACTGCACCAGCTTCCCTGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR-3UTR CAA 90 bp CATCAGGGAAGCTGGTGCAGTTCTAGTCTCGCCTCCTCGATTTCCCTGCCAGCAGCCAGGACACAGCTTTaGTTTCCTCTCCCTCTCAGG +
Preference number: 3 (lower is better)
Translates to: HQGSWCSSSLASSISLPAARTQL*FPLPLR
Trigger: CCTGAGAGGGAGAGGAAACAAAAGCTGTGTCCTGGC...TGCTGGCAGGGAAATCGAGGAGGCGAGACTAGAACTGCACCAGCTTCCCTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR-3UTR CAA 90 bp AGTTCTAGTCTCGCCTCCTCGATTTCCCTGCCAGCAGTCTTCCTCTCTCTCATTGACAGGTCCAGTTCCTaGGAGAGCAGTCCTGGTGCC +
Preference number: 3 (lower is better)
Translates to: SSSLASSISLPAVFLSLIDRSSS*ESSPGA
Trigger: GGCACCAGGACTGCTCTCCAAGGAACTGGACCTGTC...AATGAGAGAGAGGAAGACTGCTGGCAGGGAAATCGAGGAGGCGAGACTAGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR-3UTR CAA 90 bp CATCCCAGAGAAGCTCTGTCTGCGCTGCAAAGCCATGGCTGCAGACATCAGGGACTCTCCCTCTCAGGCTaGCCCATACAGAAGTTCTCT +
Preference number: 3 (lower is better)
Translates to: HPREALSALQSHGCRHQGLSLSG*PIQKFS
Trigger: AGAGAACTTCTGTATGGGCAAGCCTGAGAGGGAGAG...TCCCTGATGTCTGCAGCCATGGCTTTGCAGCGCAGACAGAGCTTCTCTGGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR-3UTR CAA 90 bp CATCCCAGAGAAGCTCTGTCTGCGCTGCAAAGCCATGGCTGCAGACATCAGGGATCCACCCATATGGCTTaGGTGCAGGAGCAGACCAAA +
Preference number: 3 (lower is better)
Translates to: HPREALSALQSHGCRHQGSTHMA*VQEQTK
Trigger: TTTGGTCTGCTCCTGCACCAAAGCCATATGGGTGGA...TCCCTGATGTCTGCAGCCATGGCTTTGCAGCGCAGACAGAGCTTCTCTGGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR TCA 72 bp ATTCTTCTGGCCCTCTGCAGAACCAGGGAGGCCAACTaGCTTCCACCCATATGGCTTTGGTGCAGGAGCAGA +
Preference number: 3 (lower is better)
Translates to: ILLALCRTREAN*LPPIWLWCRSR
Trigger: TCTGCTCCTGCACCAAAGCCATATGGGTGGAAGTCAGTTGGCCTCCCTGGTTCTGCAGAGGGCCAGAAGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR CCA 72 bp CCTTGGAGTGTAACTGTCTGGACAGGTCCAGTTCCTTaGAGAGCAGTCCTGGTGCCCTTTCTTGTGAGAGTG +
Preference number: 3 (lower is better)
Translates to: PWSVTVWTGPVP*RAVLVPFLVRV
Trigger: CACTCTCACAAGAAAGGGCACCAGGACTGCTCTCCAAGGAACTGGACCTGTCCAGACAGTTACACTCCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR-3UTR CAA 90 bp GCAGACATCAGGGAAGCTGGTGCAGTTCTAGTCTCGCCTCCTCGATTTCCCTGCTTCTCTCCAATGACCTaGGAGTGTAACTGTCTGGAC +
Preference number: 3 (lower is better)
Translates to: ADIREAGAVLVSPPRFPCFSPMT*ECNCLD
Trigger: GTCCAGACAGTTACACTCCAAGGTCATTGGAGAGAA...GCAGGGAAATCGAGGAGGCGAGACTAGAACTGCACCAGCTTCCCTGATGTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR-3UTR CAA 90 bp CATCCCAGAGAAGCTCTGTCTGCGCTGCAAAGCCATGGCTGCAGACATCAGGGAAGAGAAGATGCGAATTaGAGTCTCCATGTGGCTTCT +
Preference number: 3 (lower is better)
Translates to: HPREALSALQSHGCRHQGREDAN*SLHVAS
Trigger: AGAAGCCACATGGAGACTCAAATTCGCATCTTCTCT...TCCCTGATGTCTGCAGCCATGGCTTTGCAGCGCAGACAGAGCTTCTCTGGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR-3UTR CAA 90 bp CGTGATGCCACAGCCCTGATCAGACACCAGGGAGGGGTTCCTTTGGTCATGATGAGAGAAGATGCGAATTaGAGTCTCCATGTGGCTTCT +
Preference number: 3 (lower is better)
Translates to: RDATALIRHQGGVPLVMMREDAN*SLHVAS
Trigger: AGAAGCCACATGGAGACTCAAATTCGCATCTTCTCT...CATCATGACCAAAGGAACCCCTCCCTGGTGTCTGATCAGGGCTGTGGCATCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR TCA 72 bp CCCTCTCAGGCTTGCCCATACAGAAGTTCTCTCCAATaGCCTTGGAGTGTAACTGTCTGGACAGGTCCAGTT +
Preference number: 3 (lower is better)
Translates to: PSQACPYRSSLQ*PWSVTVWTGPV
Trigger: AACTGGACCTGTCCAGACAGTTACACTCCAAGGTCATTGGAGAGAACTTCTGTATGGGCAAGCCTGAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR GCA 72 bp ATACTGTGCAGACATCTGGAGTTCAGGGGGTCACCCTaGCTTATGCGGGAAGTCAATGTCCACAGTGTTACA +
Preference number: 3 (lower is better)
Translates to: ILCRHLEFRGSP*LMREVNVHSVT
Trigger: TGTAACACTGTGGACATTGACTTCCCGCATAAGGCAGGGTGACCCCCTGAACTCCAGATGTCTGCACAGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338087.10
3UTR-3UTR CAA 90 bp AGTGTAACTGTCTGGACAGGTCCAGTTCCTTGGAGAGCAGTCCTGGTGCCCTTTTCCATGTGGCTTCTCTaGGCTTCTAAAATACGTGAG +
Preference number: 3 (lower is better)
Translates to: SVTVWTGPVPWRAVLVPFSMWLL*ASKIRE
Trigger: CTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGA...AAAGGGCACCAGGACTGCTCTCCAAGGAACTGGACCTGTCCAGACAGTTACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR-3UTR CAA 90 bp CATATGGCTTTGGTGCAGGAGCAGACCAAAGGTATCTCCCAATTGAAGGCTAAGCAGGGAGGGGTTCCTTaGGTCATGATGTGGATAGAG +
Preference number: 3 (lower is better)
Translates to: HMALVQEQTKGISQLKAKQGGVP*VMMWIE
Trigger: CTCTATCCACATCATGACCAAAGGAACCCCTCCCTG...CTTAGCCTTCAATTGGGAGATACCTTTGGTCTGCTCCTGCACCAAAGCCATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR GCA 72 bp GCAGACATCTGGAGTTCAGGGGGTCACCCTGCCTTATaGGGGAAGTCAATGTCCACAGTGTTACATTCATTT +
Preference number: 3 (lower is better)
Translates to: ADIWSSGGHPAL*GKSMSTVLHSF
Trigger: AAATGAATGTAACACTGTGGACATTGACTTCCCGCATAAGGCAGGGTGACCCCCTGAACTCCAGATGTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338087.10
3UTR CCA 72 bp AACGGAAAACAACACATAAGATACTGTGCAGACATCTaGAGTTCAGGGGGTCACCCTGCCTTATGCGGGAAG +
Preference number: 3 (lower is better)
Translates to: NGKQHIRYCADI*SSGGHPALCGK
Trigger: CTTCCCGCATAAGGCAGGGTGACCCCCTGAACTCCAGATGTCTGCACAGTATCTTATGTGTTGTTTTCCGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338087.10
3UTR-3UTR CAA 90 bp GGTGCCCTTTCTTGTGAGAGTGGCTTTGTCCTTCCCACACACACAATGTGTGCATCCATGTGGCTTCTCTaGGCTTCTAAAATACGTGAG +
Preference number: 3 (lower is better)
Translates to: GALSCESGFVLPTHTMCASMWLL*ASKIRE
Trigger: CTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGA...TGCACACATTGTGTGTGTGGGAAGGACAAAGCCACTCTCACAAGAAAGGGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR CCA 72 bp AGAAGATGCGAATTTGAGTCTCCATGTGGCTTCTCTTaGCTTCTAAAATACGTGAGGCTCCCAGGGATCAGG +
Preference number: 3 (lower is better)
Translates to: RRCEFESPCGFS*LLKYVRLPGIR
Trigger: CCTGATCCCTGGGAGCCTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGACTCAAATTCGCATCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000524345.5
3UTR-3UTR CAA 90 bp TCTTACCTACCCGATCCAGCCAGCCCTTCCACTCTGAAGAGCAGCTGGAAAATGAAAGGTATCTCCCAATaGAAGGCTAAGAAGTCCTTT +
Preference number: 3 (lower is better)
Translates to: SYLPDPASPSTLKSSWKMKGISQ*KAKKSF
Trigger: AAAGGACTTCTTAGCCTTCAATTGGGAGATACCTTT...CATTTTCCAGCTGCTCTTCAGAGTGGAAGGGCTGGCTGGATCGGGTAGGTAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338087.10
3UTR-3UTR CAA 90 bp AGTTCTAGTCTCGCCTCCTCGATTTCCCTGCCAGCAGTCTTCCTCTCTCTCATTAAAGGTATCTCCCAATaGAAGGCTAAGAAGTCCTTT +
Preference number: 3 (lower is better)
Translates to: SSSLASSISLPAVFLSLIKGISQ*KAKKSF
Trigger: AAAGGACTTCTTAGCCTTCAATTGGGAGATACCTTT...AATGAGAGAGAGGAAGACTGCTGGCAGGGAAATCGAGGAGGCGAGACTAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR-3UTR CAA 90 bp GGATTTGGATGGGAGCTTCTCCTTCTCTGGCTATACATTGTGTTTTCTCCCTTGAGAGAAGATGCGAATTaGAGTCTCCATGTGGCTTCT +
Preference number: 3 (lower is better)
Translates to: GFGWELLLLWLYIVFSPLREDAN*SLHVAS
Trigger: AGAAGCCACATGGAGACTCAAATTCGCATCTTCTCT...CAAGGGAGAAAACACAATGTATAGCCAGAGAAGGAGAAGCTCCCATCCAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338087.10
3UTR-3UTR CAA 90 bp GCAATAAATGAATACTTGATGCATTCATACAGGCAAGAATCCCAGCATCCCAGACTCTCCCTCTCAGGCTaGCCCATACAGAAGTTCTCT +
Preference number: 3 (lower is better)
Translates to: AINEYLMHSYRQESQHPRLSLSG*PIQKFS
Trigger: AGAGAACTTCTGTATGGGCAAGCCTGAGAGGGAGAG...TCTGGGATGCTGGGATTCTTGCCTGTATGAATGCATCAAGTATTCATTTATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR CCA 72 bp TCTCATACGTTGGCTGGTTCCTTTGAAATAGCCTTTTaGAACGGTTGGGGAAACCACAGATGTCTCCTTGTA +
Preference number: 3 (lower is better)
Translates to: SHTLAGSFEIAF*NGWGNHRCLLV
Trigger: TACAAGGAGACATCTGTGGTTTCCCCAACCGTTCCAAAAGGCTATTTCAAAGGAACCAGCCAACGTATGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338087.10
3UTR TCA 72 bp TGTTACATTCATTTCTCATACGTTGGCTGGTTCCTTTaGAATAGCCTTTTGGAACGGTTGGGGAAACCACAG +
Preference number: 3 (lower is better)
Translates to: CYIHFSYVGWFL*NSLLERLGKPQ
Trigger: CTGTGGTTTCCCCAACCGTTCCAAAAGGCTATTTCAAAGGAACCAGCCAACGTATGAGAAATGAATGTAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338087.10
3UTR TCA 72 bp CCTTTGGTCATGATGTGGATAGAGAAGATGCGAATTTaGGTCTCCATGTGGCTTCTCTTGGCTTCTAAAATA +
Preference number: 3 (lower is better)
Translates to: PLVMMWIEKMRI*VSMWLLLASKI
Trigger: TATTTTAGAAGCCAAGAGAAGCCACATGGAGACTCAAATTCGCATCTTCTCTATCCACATCATGACCAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR TCA 90 bp ATAGCTTTCCACCAGCCCCCTTCATCAGAAATCACACGCAGTTTCTCCCCTCGGAGCCATCTGCGCCAGTaGACTCCGCCCAGGGCGGTG +
Preference number: 4 (lower is better)
Translates to: IAFHQPPSSEITRSFSPRSHLRQ*TPPRAV
Trigger: CACCGCCCTGGGCGGAGTTCACTGGCGCAGATGGCT...CCGAGGGGAGAAACTGCGTGTGATTTCTGATGAAGGGGGCTGGTGGAAAGCTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522432.5
CDS-3UTR GCA 90 bp GCTCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAGCTGGAGGCCCTCACTaGTGGGGCAGCCGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: APRDQGTSLFARSQAIVGAGGPH*WGSRAL
Trigger: CAAAGCACGGCTGCCCCAGCAGTGAGGGCCTCCAGC...TCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR CCA 90 bp GCTTTCCACCAGCCCCCTTCATCAGAAATCACACGCAGTTTCTCCCCTCGGCGGGGCAGCGCAGGAACCTaGCTCAGTCCACTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: AFHQPPSSEITRSFSPRRGSAGT*LSPLPC
Trigger: ACAGGGAAGTGGACTGAGCCAGGTTCCTGCGCTGCC...CCGCCGAGGGGAGAAACTGCGTGTGATTTCTGATGAAGGGGGCTGGTGGAAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522432.5
CDS-3UTR GCA 90 bp GCAGACATCAGGGAAGCTGGTGCAGTTCTAGTCTCGCCTCCTCGATTTCCCTGCCCTGTGGGAGCTGTCTaGAGAGGGATTGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: ADIREAGAVLVSPPRFPCPVGAV*RGIAGC
Trigger: GCACCCAGCAATCCCTCTGCAGACAGCTCCCACAGG...GCAGGGAAATCGAGGAGGCGAGACTAGAACTGCACCAGCTTCCCTGATGTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR GCA 90 bp AGCTTTCCACCAGCCCCCTTCATCAGAAATCACACGCAGTTTCTCCCCTCGGCGCCTGTGGGAGCTGTCTaGAGAGGGATTGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: SFPPAPFIRNHTQFLPSAPVGAV*RGIAGC
Trigger: GCACCCAGCAATCCCTCTGCAGACAGCTCCCACAGG...CGCCGAGGGGAGAAACTGCGTGTGATTTCTGATGAAGGGGGCTGGTGGAAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522432.5
CDS-3UTR GCA 90 bp GCTCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGACCTCGGCCTTGTCTCTaGCCAGGCCCTCAAACAGCC +
Preference number: 4 (lower is better)
Translates to: APRDQGTSLFARSQAIVGPRPCL*PGPQTA
Trigger: GGCTGTTTGAGGGCCTGGGCAGAGACAAGGCCGAGG...TCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR GCA 90 bp CTGGGCTCTTCCAAGCATCGCCCGACATGTCATGATCCAATGTTTCGTGATGCCCTGCTGGGGCAGCCGTaGTTTGTGTCAGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: LGSSKHRPTCHDPMFRDALLGQP*FVSGRA
Trigger: CGCCCTGCCTGACACAAAGCACGGCTGCCCCAGCAG...GGCATCACGAAACATTGGATCATGACATGTCGGGCGATGCTTGGAAGAGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp TCATTCTTCTGGCCCTCTGCAGAACCAGGGAGGCCAACTGACTTCCACCCATATCTGCTGGGGCAGCCGTaGTTTGTGTCAGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: SFFWPSAEPGRPTDFHPYLLGQP*FVSGRA
Trigger: CGCCCTGCCTGACACAAAGCACGGCTGCCCCAGCAG...ATATGGGTGGAAGTCAGTTGGCCTCCCTGGTTCTGCAGAGGGCCAGAAGAATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp CCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACTCTGCTGGGGCAGCCGTaGTTTGTGTCAGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: PRDQGTSLFARSQAIVGTLLGQP*FVSGRA
Trigger: CGCCCTGCCTGACACAAAGCACGGCTGCCCCAGCAG...AGTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR GCA 90 bp AGTGTAACTGTCTGGACAGGTCCAGTTCCTTGGAGAGCAGTCCTGGTGCCCTTTGCTGGAGGCCCTCACTaGTGGGGCAGCCGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: SVTVWTGPVPWRAVLVPFAGGPH*WGSRAL
Trigger: CAAAGCACGGCTGCCCCAGCAGTGAGGGCCTCCAGC...AAAGGGCACCAGGACTGCTCTCCAAGGAACTGGACCTGTCCAGACAGTTACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp GCTCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGACCCTCGGGGTCCTCCTaGAGTCTGGACACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: APRDQGTSLFARSQAIVGPSGSS*SLDTLL
Trigger: GAGGAGAGTGTCCAGACTGCAGGAGGACCCCGAGGG...TCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR CCA 90 bp GCTTTCCACCAGCCCCCTTCATCAGAAATCACACGCAGTTTCTCCCCTCGGCGGGGCTTCTCGCGGTTGTaGAGAAGCAGCCCATGCTAC +
Preference number: 4 (lower is better)
Translates to: AFHQPPSSEITRSFSPRRGFSRL*RSSPCY
Trigger: GTAGCATGGGCTGCTTCTCCACAACCGCGAGAAGCC...CCGCCGAGGGGAGAAACTGCGTGTGATTTCTGATGAAGGGGGCTGGTGGAAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522432.5
CDS-3UTR CCA 90 bp GCTTTCCACCAGCCCCCTTCATCAGAAATCACACGCAGTTTCTCCCCTCGGCGGCGGCAGGCGCAGGGGTaGATTTCATGCTGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: AFHQPPSSEITRSFSPRRRQAQG*ISCCFP
Trigger: TGGGAAACAGCATGAAATCCACCCCTGCGCCTGCCG...CCGCCGAGGGGAGAAACTGCGTGTGATTTCTGATGAAGGGGGCTGGTGGAAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522432.5
CDS-3UTR CCA 90 bp TGTCAGGAGACGGGTAGTCACTTAGCACGGCAAGGAAGTCGCTATCCAGTCCTGGCTGGGAACCATGTGTaGTCACCCCCTCCGGGTTGG +
Preference number: 4 (lower is better)
Translates to: CQETGSHLARQGSRYPVLAGNHV*SPPPGW
Trigger: CCAACCCGGAGGGGGTGACCACACATGGTTCCCAGC...CAGGACTGGATAGCGACTTCCTTGCCGTGCTAAGTGACTACCCGTCTCCTGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522432.5
CDS-3UTR TCA 90 bp GCTTTCCACCAGCCCCCTTCATCAGAAATCACACGCAGTTTCTCCCCTCGGCGGTTCACACACTGGGCATaGCTCCTGTGGGAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: AFHQPPSSEITRSFSPRRFTHWA*LLWELS
Trigger: AGACAGCTCCCACAGGAGTCATGCCCAGTGTGTGAA...CCGCCGAGGGGAGAAACTGCGTGTGATTTCTGATGAAGGGGGCTGGTGGAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522432.5
CDS-3UTR TCA 90 bp AGTGTAACTGTCTGGACAGGTCCAGTTCCTTGGAGAGCAGTCCTGGTGCCCTTTTCAGGCAGGGCGTGGTaGGCACACAGCACAGGCCAT +
Preference number: 4 (lower is better)
Translates to: SVTVWTGPVPWRAVLVPFSGRAW*AHSTGH
Trigger: ATGGCCTGTGCTGTGTGCTCACCACGCCCTGCCTGA...AAAGGGCACCAGGACTGCTCTCCAAGGAACTGGACCTGTCCAGACAGTTACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR TCA 90 bp CCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACTTCAGGCAGGGCGTGGTaGGCACACAGCACAGGCCAT +
Preference number: 4 (lower is better)
Translates to: PRDQGTSLFARSQAIVGTSGRAW*AHSTGH
Trigger: ATGGCCTGTGCTGTGTGCTCACCACGCCCTGCCTGA...AGTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR TCA 90 bp TCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACTCAGGCAGGGCGTGGTaGGCACACAGCACAGGCCAT +
Preference number: 4 (lower is better)
Translates to: SQGSGNLAFRKIPGNSWNSGRAW*AHSTGH
Trigger: ATGGCCTGTGCTGTGTGCTCACCACGCCCTGCCTGA...GTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR GCA 90 bp GCTTTCCACCAGCCCCCTTCATCAGAAATCACACGCAGTTTCTCCCCTCGGCGGTGGGTGCAGAGTCACTaGCTCTCCGTCTGTCAACTG +
Preference number: 4 (lower is better)
Translates to: AFHQPPSSEITRSFSPRRWVQSH*LSVCQL
Trigger: CAGTTGACAGACGGAGAGGCAGTGACTCTGCACCCA...CCGCCGAGGGGAGAAACTGCGTGTGATTTCTGATGAAGGGGGCTGGTGGAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522432.5
CDS-3UTR GCA 90 bp TCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGAGGCTCCCAGGGATCAGGCTGCTGGGGCAGCCGTaGTTTGTGTCAGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: SPCGFSWLLKYVRLPGIRLLGQP*FVSGRA
Trigger: CGCCCTGCCTGACACAAAGCACGGCTGCCCCAGCAG...CCTGATCCCTGGGAGCCTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000524345.5
CDS-3UTR GCA 90 bp CCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACTCCCTCGGGGTCCTCCTaGAGTCTGGACACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: PRDQGTSLFARSQAIVGTPSGSS*SLDTLL
Trigger: GAGGAGAGTGTCCAGACTGCAGGAGGACCCCGAGGG...AGTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR GCA 90 bp ATAGCTTTCCACCAGCCCCCTTCATCAGAAATCACACGCAGTTTCTCCCCTCGGGACAGGGCAGCCATCTaGGCCAGTGAACTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: IAFHQPPSSEITRSFSPRDRAAI*ASELRP
Trigger: TGGGCGGAGTTCACTGGCGCAGATGGCTGCCCTGTC...CCGAGGGGAGAAACTGCGTGTGATTTCTGATGAAGGGGGCTGGTGGAAAGCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522432.5
CDS-3UTR CCA 90 bp GGCTCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGGGCTTCTCGCGGTTGTaGAGAAGCAGCCCATGCTAC +
Preference number: 4 (lower is better)
Translates to: GSQGSGNLAFRKIPGNSWGFSRL*RSSPCY
Trigger: GTAGCATGGGCTGCTTCTCCACAACCGCGAGAAGCC...CCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR CCA 90 bp AGCTTTCCACCAGCCCCCTTCATCAGAAATCACACGCAGTTTCTCCCCTCGGCGCTGCAGAGGGATTGCTaGGTGCAGAGTCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: SFPPAPFIRNHTQFLPSALQRDC*VQSHCL
Trigger: GAGGCAGTGACTCTGCACCCAGCAATCCCTCTGCAG...CGCCGAGGGGAGAAACTGCGTGTGATTTCTGATGAAGGGGGCTGGTGGAAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522432.5
CDS-3UTR CCA 90 bp CGTGATGCCACAGCCCTGATCAGACACCAGGGAGGGGTTCCTTTGGTCATGATGCGGCAGGCGCAGGGGTaGATTTCATGCTGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: RDATALIRHQGGVPLVMMRQAQG*ISCCFP
Trigger: TGGGAAACAGCATGAAATCCACCCCTGCGCCTGCCG...CATCATGACCAAAGGAACCCCTCCCTGGTGTCTGATCAGGGCTGTGGCATCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp GCAGACATCAGGGAAGCTGGTGCAGTTCTAGTCTCGCCTCCTCGATTTCCCTGCCGGCAGGCGCAGGGGTaGATTTCATGCTGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: ADIREAGAVLVSPPRFPCRQAQG*ISCCFP
Trigger: TGGGAAACAGCATGAAATCCACCCCTGCGCCTGCCG...GCAGGGAAATCGAGGAGGCGAGACTAGAACTGCACCAGCTTCCCTGATGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp ATGTTTCGTGATGCCACAGCCCTGATCAGACACCAGGGAGGGGTTCCTTTGGTCAGGTCCTCCAGGCACTaGAAGGTGAGCCTCGGGGAA +
Preference number: 4 (lower is better)
Translates to: MFRDATALIRHQGGVPLVRSSRH*KVSLGE
Trigger: TTCCCCGAGGCTCACCTTCCAGTGCCTGGAGGACCT...GACCAAAGGAACCCCTCCCTGGTGTCTGATCAGGGCTGTGGCATCACGAAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp TCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACGGAGGCCCTCACTGCTaGGGCAGCCGTGCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: SQGSGNLAFRKIPGNSWNGGPHC*GSRALC
Trigger: ACACAAAGCACGGCTGCCCCAGCAGTGAGGGCCTCC...GTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR CCA 90 bp CATCCCAGAGAAGCTCTGTCTGCGCTGCAAAGCCATGGCTGCAGACATCAGGGAGGTCCTCCTGCAGTCTaGACACTCTCCTCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: HPREALSALQSHGCRHQGGPPAV*TLSSSP
Trigger: TGGACTGGAGGAGAGTGTCCAGACTGCAGGAGGACC...TCCCTGATGTCTGCAGCCATGGCTTTGCAGCGCAGACAGAGCTTCTCTGGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp GGTGCCCTTTCTTGTGAGAGTGGCTTTGTCCTTCCCACACACACAATGTGTGCAGGAGTTGGCCTCGTCTaGGAGCAGGTGGAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GALSCESGFVLPTHTMCAGVGLV*EQVEWG
Trigger: CCCCCACTCCACCTGCTCCCAGACGAGGCCAACTCC...TGCACACATTGTGTGTGTGGGAAGGACAAAGCCACTCTCACAAGAAAGGGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395352.7
CDS-3UTR CCA 90 bp TGTCAGGAGACGGGTAGTCACTTAGCACGGCAAGGAAGTCGCTATCCAGTCCTGGTCGCTATCCAGTCCTaGAGGCAGCGCAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: CQETGSHLARQGSRYPVLVAIQS*RQRRNL
Trigger: CAGGTTCCTGCGCTGCCTCCAGGACTGGATAGCGAC...CAGGACTGGATAGCGACTTCCTTGCCGTGCTAAGTGACTACCCGTCTCCTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522432.5
CDS-3UTR TCA 90 bp GCAGACATCAGGGAAGCTGGTGCAGTTCTAGTCTCGCCTCCTCGATTTCCCTGCTTCACACACTGGGCATaGCTCCTGTGGGAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: ADIREAGAVLVSPPRFPCFTHWA*LLWELS
Trigger: AGACAGCTCCCACAGGAGTCATGCCCAGTGTGTGAA...GCAGGGAAATCGAGGAGGCGAGACTAGAACTGCACCAGCTTCCCTGATGTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR TCA 90 bp GCAGACATCAGGGAAGCTGGTGCAGTTCTAGTCTCGCCTCCTCGATTTCCCTGCCAGTCCACAGTCTTCTaGCGCAAGGTGACAGGTGAG +
Preference number: 4 (lower is better)
Translates to: ADIREAGAVLVSPPRFPCQSTVF*RKVTGE
Trigger: CTCACCTGTCACCTTGCGTCAGAAGACTGTGGACTG...GCAGGGAAATCGAGGAGGCGAGACTAGAACTGCACCAGCTTCCCTGATGTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR TCA 90 bp TCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGAGGCTCCCAGGGATCAGGGTGATGCCACAGCCCTaGTCAGACACCAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SPCGFSWLLKYVRLPGIRVMPQP*SDTREG
Trigger: CCCCTCCCTGGTGTCTGATCAGGGCTGTGGCATCAC...CCTGATCCCTGGGAGCCTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR TCA 90 bp CAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACTTCGTGATGCCACAGCCCTaGTCAGACACCAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: QGSGNLAFRKIPGNSWNFVMPQP*SDTREG
Trigger: CCCCTCCCTGGTGTCTGATCAGGGCTGTGGCATCAC...GAAGTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR TCA 90 bp CATCAGGGAAGCTGGTGCAGTTCTAGTCTCGCCTCCTCGATTTCCCTGCCAGCAACCAGGGAGGCCAACTaGCTTCCACCCATATGGCTT +
Preference number: 4 (lower is better)
Translates to: HQGSWCSSSLASSISLPATREAN*LPPIWL
Trigger: AAGCCATATGGGTGGAAGTCAGTTGGCCTCCCTGGT...TGCTGGCAGGGAAATCGAGGAGGCGAGACTAGAACTGCACCAGCTTCCCTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR TCA 90 bp CGTGATGCCACAGCCCTGATCAGACACCAGGGAGGGGTTCCTTTGGTCATGATGAAGTCAACCGTGCCCTaGGCCCTCCAAGTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: RDATALIRHQGGVPLVMMKSTVP*ALQVEN
Trigger: ATTCTCCACTTGGAGGGCTCAGGGCACGGTTGACTT...CATCATGACCAAAGGAACCCCTCCCTGGTGTCTGATCAGGGCTGTGGCATCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427060.6
CDS-3UTR GCA 90 bp GACATCTGGAGTTCAGGGGGTCACCCTGCCTTATGCGGGAAGTCAATGTCCACAAGAGGGATTGCTGGGTaGAGAGTCACTGCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: DIWSSGGHPALCGKSMSTRGIAG*RVTASP
Trigger: CGGAGAGGCAGTGACTCTGCACCCAGCAATCCCTCT...TGTGGACATTGACTTCCCGCATAAGGCAGGGTGACCCCCTGAACTCCAGATGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR GCA 90 bp TGTCAGGAGACGGGTAGTCACTTAGCACGGCAAGGAAGTCGCTATCCAGTCCTGAGAGGGATTGCTGGGTaGAGAGTCACTGCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: CQETGSHLARQGSRYPVLRGIAG*RVTASP
Trigger: CGGAGAGGCAGTGACTCTGCACCCAGCAATCCCTCT...CAGGACTGGATAGCGACTTCCTTGCCGTGCTAAGTGACTACCCGTCTCCTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522432.5
CDS-3UTR GCA 90 bp GGTGCCCTTTCTTGTGAGAGTGGCTTTGTCCTTCCCACACACACAATGTGTGCACCTCGGCCTTGTCTCTaGCCAGGCCCTCAAACAGCC +
Preference number: 4 (lower is better)
Translates to: GALSCESGFVLPTHTMCAPRPCL*PGPQTA
Trigger: GGCTGTTTGAGGGCCTGGGCAGAGACAAGGCCGAGG...TGCACACATTGTGTGTGTGGGAAGGACAAAGCCACTCTCACAAGAAAGGGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp GCTCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGATTTGTGTCTGGCAGCTaGAGCAGCTCCTCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: APRDQGTSLFARSQAIVGFVSGS*SSSSAL
Trigger: CAAGGCCGAGGAGCTGCTGCAGCTGCCAGACACAAA...TCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR GCA 90 bp TTTCCTCTCCCTCTCAGGCTTGCCCATACAGAAGTTCTCTCCAATGACCTTGGACTGCTGGGGCAGCCGTaGTTTGTGTCAGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: FPLPLRLAHTEVLSNDLGLLGQP*FVSGRA
Trigger: CGCCCTGCCTGACACAAAGCACGGCTGCCCCAGCAG...TCCAAGGTCATTGGAGAGAACTTCTGTATGGGCAAGCCTGAGAGGGAGAGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp TCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGAGGCTCCCAGGGATCAGGCCCTCGGGGTCCTCCTaGAGTCTGGACACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SPCGFSWLLKYVRLPGIRPSGSS*SLDTLL
Trigger: GAGGAGAGTGTCCAGACTGCAGGAGGACCCCGAGGG...CCTGATCCCTGGGAGCCTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000524345.5
CDS-3UTR GCA 90 bp CAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACTTCCCCTCGGGGTCCTCCTaGAGTCTGGACACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: QGSGNLAFRKIPGNSWNFPSGSS*SLDTLL
Trigger: GAGGAGAGTGTCCAGACTGCAGGAGGACCCCGAGGG...GAAGTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR GCA 90 bp CATCAGGGAAGCTGGTGCAGTTCTAGTCTCGCCTCCTCGATTTCCCTGCCAGCATTCAGGGCACCCATCTaGAAACCCAGACCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: HQGSWCSSSLASSISLPAFRAPI*KPRPSA
Trigger: GGCAGAAGGTCTGGGTTTGCAGATGGGTGCCCTGAA...TGCTGGCAGGGAAATCGAGGAGGCGAGACTAGAACTGCACCAGCTTCCCTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp GGTGCCCTTTCTTGTGAGAGTGGCTTTGTCCTTCCCACACACACAATGTGTGCAGGAGGCCCTCACTGCTaGGGCAGCCGTGCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: GALSCESGFVLPTHTMCAGGPHC*GSRALC
Trigger: ACACAAAGCACGGCTGCCCCAGCAGTGAGGGCCTCC...TGCACACATTGTGTGTGTGGGAAGGACAAAGCCACTCTCACAAGAAAGGGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp CAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACTTCGGAGGCCCTCACTGCTaGGGCAGCCGTGCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: QGSGNLAFRKIPGNSWNFGGPHC*GSRALC
Trigger: ACACAAAGCACGGCTGCCCCAGCAGTGAGGGCCTCC...GAAGTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR CCA 90 bp ATAGCTTTCCACCAGCCCCCTTCATCAGAAATCACACGCAGTTTCTCCCCTCGGTGCTGCAGGGGCTGCTaGGAACCATGTGTGGTCACC +
Preference number: 4 (lower is better)
Translates to: IAFHQPPSSEITRSFSPRCCRGC*EPCVVT
Trigger: GGTGACCACACATGGTTCCCAGCAGCCCCTGCAGCA...CCGAGGGGAGAAACTGCGTGTGATTTCTGATGAAGGGGGCTGGTGGAAAGCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522432.5
CDS-3UTR TCA 90 bp GCTCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAAGCATCAGGGCTGCCTaGGATGTTCTCCATTCGCAG +
Preference number: 4 (lower is better)
Translates to: APRDQGTSLFARSQAIVGSIRAA*DVLHSQ
Trigger: CTGCGAATGGAGAACATCTCAGGCAGCCCTGATGCT...TCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000517648.5
ENST00000524345.5
CDS-3UTR TCA 90 bp TTTCCTCTCCCTCTCAGGCTTGCCCATACAGAAGTTCTCTCCAATGACCTTGGATCAGGCAGGGCGTGGTaGGCACACAGCACAGGCCAT +
Preference number: 4 (lower is better)
Translates to: FPLPLRLAHTEVLSNDLGSGRAW*AHSTGH
Trigger: ATGGCCTGTGCTGTGTGCTCACCACGCCCTGCCTGA...TCCAAGGTCATTGGAGAGAACTTCTGTATGGGCAAGCCTGAGAGGGAGAGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR TCA 90 bp GCTCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGACAGTCCACAGTCTTCTaGCGCAAGGTGACAGGTGAG +
Preference number: 4 (lower is better)
Translates to: APRDQGTSLFARSQAIVGQSTVF*RKVTGE
Trigger: CTCACCTGTCACCTTGCGTCAGAAGACTGTGGACTG...TCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR TCA 90 bp CATACCAGTAGCACGATGAGCTCAGATGGACGGAATGCTTATGTGAGCAGACAGGTGATGCCACAGCCCTaGTCAGACACCAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: HTSSTMSSDGRNAYVSRQVMPQP*SDTREG
Trigger: CCCCTCCCTGGTGTCTGATCAGGGCTGTGGCATCAC...CTGTCTGCTCACATAAGCATTCCGTCCATCTGAGCTCATCGTGCTACTGGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR GCA 90 bp GGCTCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGGTGGAGCATCAGGGCTaGCTGAGATGTTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: GSQGSGNLAFRKIPGNSWVEHQG*LRCSPF
Trigger: GAATGGAGAACATCTCAGGCAGCCCTGATGCTCCAC...CCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000524345.5
CDS-3UTR GCA 90 bp GCTTTCCACCAGCCCCCTTCATCAGAAATCACACGCAGTTTCTCCCCTCGGCGGCCGTCTGTCAACTGCTaGTGCTCCAGAATAAACAGG +
Preference number: 4 (lower is better)
Translates to: AFHQPPSSEITRSFSPRRPSVNC*CSRINR
Trigger: CCTGTTTATTCTGGAGCAGCAGCAGTTGACAGACGG...CCGCCGAGGGGAGAAACTGCGTGTGATTTCTGATGAAGGGGGCTGGTGGAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522432.5
CDS-3UTR GCA 90 bp TGTCAGGAGACGGGTAGTCACTTAGCACGGCAAGGAAGTCGCTATCCAGTCCTGTGTCTGCAGAGGGATTaGTGGGTGCAGAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: CQETGSHLARQGSRYPVLCLQRD*WVQSHC
Trigger: GCAGTGACTCTGCACCCAGCAATCCCTCTGCAGACA...CAGGACTGGATAGCGACTTCCTTGCCGTGCTAAGTGACTACCCGTCTCCTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522432.5
CDS-3UTR GCA 90 bp TTTCCTCTCCCTCTCAGGCTTGCCCATACAGAAGTTCTCTCCAATGACCTTGGACCTCGGCCTTGTCTCTaGCCAGGCCCTCAAACAGCC +
Preference number: 4 (lower is better)
Translates to: FPLPLRLAHTEVLSNDLGPRPCL*PGPQTA
Trigger: GGCTGTTTGAGGGCCTGGGCAGAGACAAGGCCGAGG...TCCAAGGTCATTGGAGAGAACTTCTGTATGGGCAAGCCTGAGAGGGAGAGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp ACATACATGCTGGGCTCTTCCAAGCATCGCCCGACATGTCATGATCCAATGTTTGCTGGAGGCCCTCACTaGTGGGGCAGCCGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: TYMLGSSKHRPTCHDPMFAGGPH*WGSRAL
Trigger: CAAAGCACGGCTGCCCCAGCAGTGAGGGCCTCCAGC...AAACATTGGATCATGACATGTCGGGCGATGCTTGGAAGAGCCCAGCATGTATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp TTTGAGTCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGAGGCTCCCAGGGCCCTCGGGGTCCTCCTaGAGTCTGGACACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: FESPCGFSWLLKYVRLPGPSGSS*SLDTLL
Trigger: GAGGAGAGTGTCCAGACTGCAGGAGGACCCCGAGGG...CCCTGGGAGCCTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGACTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000524345.5
CDS-3UTR GCA 90 bp ATGTTTCGTGATGCCACAGCCCTGATCAGACACCAGGGAGGGGTTCCTTTGGTCAAGCTCTGTCTGCGCTaGAAAGCCATGGCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: MFRDATALIRHQGGVPLVKLCLR*KAMAAD
Trigger: GTCTGCAGCCATGGCTTTGCAGCGCAGACAGAGCTT...GACCAAAGGAACCCCTCCCTGGTGTCTGATCAGGGCTGTGGCATCACGAAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp CATCCCAGAGAAGCTCTGTCTGCGCTGCAAAGCCATGGCTGCAGACATCAGGGAGGTCACCCTGCCTTATaGGGGAAGTCAATGTCCACA +
Preference number: 4 (lower is better)
Translates to: HPREALSALQSHGCRHQGGHPAL*GKSMST
Trigger: TGTGGACATTGACTTCCCGCATAAGGCAGGGTGACC...TCCCTGATGTCTGCAGCCATGGCTTTGCAGCGCAGACAGAGCTTCTCTGGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR CCA 90 bp CCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACTCGGCAGGCGCAGGGGTaGATTTCATGCTGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: PRDQGTSLFARSQAIVGTRQAQG*ISCCFP
Trigger: TGGGAAACAGCATGAAATCCACCCCTGCGCCTGCCG...AGTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
CDS-3UTR CCA 90 bp TCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGAGGCTCCCAGGGATCAGGAGGTCCTCCAGGCACTaGAAGGTGAGCCTCGGGGAA +
Preference number: 4 (lower is better)
Translates to: SPCGFSWLLKYVRLPGIRRSSRH*KVSLGE
Trigger: TTCCCCGAGGCTCACCTTCCAGTGCCTGGAGGACCT...CCTGATCCCTGGGAGCCTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000524345.5
CDS-3UTR CCA 90 bp TTTCCTCTCCCTCTCAGGCTTGCCCATACAGAAGTTCTCTCCAATGACCTTGGAGGAGGCCCTCACTGCTaGGGCAGCCGTGCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: FPLPLRLAHTEVLSNDLGGGPHC*GSRALC
Trigger: ACACAAAGCACGGCTGCCCCAGCAGTGAGGGCCTCC...TCCAAGGTCATTGGAGAGAACTTCTGTATGGGCAAGCCTGAGAGGGAGAGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp TTTGAGTCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGAGGCTCCCAGGGGGAGGCCCTCACTGCTaGGGCAGCCGTGCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: FESPCGFSWLLKYVRLPGGGPHC*GSRALC
Trigger: ACACAAAGCACGGCTGCCCCAGCAGTGAGGGCCTCC...CCCTGGGAGCCTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGACTCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000524345.5
CDS-3UTR CCA 90 bp TCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACGGTCCTCCTGCAGTCTaGACACTCTCCTCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: SQGSGNLAFRKIPGNSWNGPPAV*TLSSSP
Trigger: TGGACTGGAGGAGAGTGTCCAGACTGCAGGAGGACC...GTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR CCA 90 bp CGTGATGCCACAGCCCTGATCAGACACCAGGGAGGGGTTCCTTTGGTCATGATGAGGTGTTGTCCTCACTaGTCAGGGACAGGTAAGAGG +
Preference number: 4 (lower is better)
Translates to: RDATALIRHQGGVPLVMMRCCPH*SGTGKR
Trigger: CCTCTTACCTGTCCCTGACCAGTGAGGACAACACCT...CATCATGACCAAAGGAACCCCTCCCTGGTGTCTGATCAGGGCTGTGGCATCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp CTGGGCTCTTCCAAGCATCGCCCGACATGTCATGATCCAATGTTTCGTGATGCCACAGGTCCAGTTCCTTaGAGAGCAGTCCTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: LGSSKHRPTCHDPMFRDATGPVP*RAVLVP
Trigger: GGGCACCAGGACTGCTCTCCAAGGAACTGGACCTGT...GGCATCACGAAACATTGGATCATGACATGTCGGGCGATGCTTGGAAGAGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp TCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACACAGGTCCAGTTCCTTaGAGAGCAGTCCTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: SQGSGNLAFRKIPGNSWNTGPVP*RAVLVP
Trigger: GGGCACCAGGACTGCTCTCCAAGGAACTGGACCTGT...GTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR TCA 90 bp CCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACTAGCATCAGGGCTGCCTaGGATGTTCTCCATTCGCAG +
Preference number: 4 (lower is better)
Translates to: PRDQGTSLFARSQAIVGTSIRAA*DVLHSQ
Trigger: CTGCGAATGGAGAACATCTCAGGCAGCCCTGATGCT...AGTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000517648.5
ENST00000524345.5
CDS-3UTR TCA 90 bp GCTCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGATGGTGCCCTTTCTTGTaGGAGTGGCTTTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: APRDQGTSLFARSQAIVGWCPFL*EWLCPS
Trigger: GGAAGGACAAAGCCACTCTCACAAGAAAGGGCACCA...TCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp ATGTTTCGTGATGCCACAGCCCTGATCAGACACCAGGGAGGGGTTCCTTTGGTCGTGGAGCATCAGGGCTaGCTGAGATGTTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: MFRDATALIRHQGGVPLVVEHQG*LRCSPF
Trigger: GAATGGAGAACATCTCAGGCAGCCCTGATGCTCCAC...GACCAAAGGAACCCCTCCCTGGTGTCTGATCAGGGCTGTGGCATCACGAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338087.10
ENST00000395352.7
CDS-3UTR GCA 90 bp CAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACTTCTTTGTGTCTGGCAGCTaGAGCAGCTCCTCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: QGSGNLAFRKIPGNSWNFFVSGS*SSSSAL
Trigger: CAAGGCCGAGGAGCTGCTGCAGCTGCCAGACACAAA...GAAGTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR GCA 90 bp GGTGCCCTTTCTTGTGAGAGTGGCTTTGTCCTTCCCACACACACAATGTGTGCATTTGTGTCTGGCAGCTaGAGCAGCTCCTCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: GALSCESGFVLPTHTMCAFVSGS*SSSSAL
Trigger: CAAGGCCGAGGAGCTGCTGCAGCTGCCAGACACAAA...TGCACACATTGTGTGTGTGGGAAGGACAAAGCCACTCTCACAAGAAAGGGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp GCAGACATCAGGGAAGCTGGTGCAGTTCTAGTCTCGCCTCCTCGATTTCCCTGCACAGGTAAGAGGCAATaGTCTCTCGAAGGCCATAGC +
Preference number: 4 (lower is better)
Translates to: ADIREAGAVLVSPPRFPCTGKRQ*SLEGHS
Trigger: GCTATGGCCTTCGAGAGAGCATTGCCTCTTACCTGT...GCAGGGAAATCGAGGAGGCGAGACTAGAACTGCACCAGCTTCCCTGATGTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp CTGGGCTCTTCCAAGCATCGCCCGACATGTCATGATCCAATGTTTCGTGATGCCCCTCCTCGATTTCCCTaGCAGCAGTCTTCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: LGSSKHRPTCHDPMFRDAPPRFP*QQSSSL
Trigger: GAGAGAGGAAGACTGCTGGCAGGGAAATCGAGGAGG...GGCATCACGAAACATTGGATCATGACATGTCGGGCGATGCTTGGAAGAGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp CAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACTTCGGTCCTCCTGCAGTCTaGACACTCTCCTCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: QGSGNLAFRKIPGNSWNFGPPAV*TLSSSP
Trigger: TGGACTGGAGGAGAGTGTCCAGACTGCAGGAGGACC...GAAGTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR CCA 90 bp CAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACTTCGATGCCCAGAGCCTGTaGTATAGGAGACAGACGGGG +
Preference number: 4 (lower is better)
Translates to: QGSGNLAFRKIPGNSWNFDAQSL*YRRQTG
Trigger: CCCCGTCTGTCTCCTATACCACAGGCTCTGGGCATC...GAAGTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427060.6
CDS-3UTR TCA 90 bp GGCTCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGGTGTCTCACCGACAGTaGGTAAAACCCTTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: GSQGSGNLAFRKIPGNSWVSHRQ*VKPFLG
Trigger: ACCAAGAAAGGGTTTTACTCACTGTCGGTGAGACAC...CCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000524345.5
CDS-3UTR TCA 90 bp CAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACTTCCAGTCCACAGTCTTCTaGCGCAAGGTGACAGGTGAG +
Preference number: 4 (lower is better)
Translates to: QGSGNLAFRKIPGNSWNFQSTVF*RKVTGE
Trigger: CTCACCTGTCACCTTGCGTCAGAAGACTGTGGACTG...GAAGTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR GCA 90 bp CATCCCAGAGAAGCTCTGTCTGCGCTGCAAAGCCATGGCTGCAGACATCAGGGATCTGTCAACTGCTGCTaGTCCAGAATAAACAGGCAG +
Preference number: 4 (lower is better)
Translates to: HPREALSALQSHGCRHQGSVNCC*SRINRQ
Trigger: CTGCCTGTTTATTCTGGAGCAGCAGCAGTTGACAGA...TCCCTGATGTCTGCAGCCATGGCTTTGCAGCGCAGACAGAGCTTCTCTGGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR GCA 90 bp AGCTTTCCACCAGCCCCCTTCATCAGAAATCACACGCAGTTTCTCCCCTCGGCGTCTCCGTCTGTCAACTaGTGCTGCTCCAGAATAAAC +
Preference number: 4 (lower is better)
Translates to: SFPPAPFIRNHTQFLPSASPSVN*CCSRIN
Trigger: GTTTATTCTGGAGCAGCAGCAGTTGACAGACGGAGA...CGCCGAGGGGAGAAACTGCGTGTGATTTCTGATGAAGGGGGCTGGTGGAAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522432.5
CDS-3UTR GCA 90 bp GGATTTGGATGGGAGCTTCTCCTTCTCTGGCTATACATTGTGTTTTCTCCCTTGCCTCGGCCTTGTCTCTaGCCAGGCCCTCAAACAGCC +
Preference number: 4 (lower is better)
Translates to: GFGWELLLLWLYIVFSPLPRPCL*PGPQTA
Trigger: GGCTGTTTGAGGGCCTGGGCAGAGACAAGGCCGAGG...CAAGGGAGAAAACACAATGTATAGCCAGAGAAGGAGAAGCTCCCATCCAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR GCA 90 bp ATGTTTCGTGATGCCACAGCCCTGATCAGACACCAGGGAGGGGTTCCTTTGGTCACAGGTAAGAGGCAATaGTCTCTCGAAGGCCATAGC +
Preference number: 4 (lower is better)
Translates to: MFRDATALIRHQGGVPLVTGKRQ*SLEGHS
Trigger: GCTATGGCCTTCGAGAGAGCATTGCCTCTTACCTGT...GACCAAAGGAACCCCTCCCTGGTGTCTGATCAGGGCTGTGGCATCACGAAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp CATCAGGGAAGCTGGTGCAGTTCTAGTCTCGCCTCCTCGATTTCCCTGCCAGCAATGAGCTCTTTCTCTTaGTGCCACCATACATCAGGG +
Preference number: 4 (lower is better)
Translates to: HQGSWCSSSLASSISLPAMSSFS*CHHTSG
Trigger: CCCTGATGTATGGTGGCAGCAAGAGAAAGAGCTCAT...TGCTGGCAGGGAAATCGAGGAGGCGAGACTAGAACTGCACCAGCTTCCCTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp CATCCCAGAGAAGCTCTGTCTGCGCTGCAAAGCCATGGCTGCAGACATCAGGGAATGAGCTCTTTCTCTTaGTGCCACCATACATCAGGG +
Preference number: 4 (lower is better)
Translates to: HPREALSALQSHGCRHQGMSSFS*CHHTSG
Trigger: CCCTGATGTATGGTGGCAGCAAGAGAAAGAGCTCAT...TCCCTGATGTCTGCAGCCATGGCTTTGCAGCGCAGACAGAGCTTCTCTGGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp GGCTCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGGTGTGCATACATACATaGTGGGCTCTTCCAAGCATC +
Preference number: 4 (lower is better)
Translates to: GSQGSGNLAFRKIPGNSWVCIHT*WALPSI
Trigger: GATGCTTGGAAGAGCCCAGCATGTATGTATGCACAC...CCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp CGTGATGCCACAGCCCTGATCAGACACCAGGGAGGGGTTCCTTTGGTCATGATGGTGTGCATACATACATaGTGGGCTCTTCCAAGCATC +
Preference number: 4 (lower is better)
Translates to: RDATALIRHQGGVPLVMMVCIHT*WALPSI
Trigger: GATGCTTGGAAGAGCCCAGCATGTATGTATGCACAC...CATCATGACCAAAGGAACCCCTCCCTGGTGTCTGATCAGGGCTGTGGCATCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp GCTCTTCCAAGCATCGCCCGACATGTCATGATCCAATGTTTCGTGATGCCACAGTTCAGGGCACCCATCTaGAAACCCAGACCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: ALPSIARHVMIQCFVMPQFRAPI*KPRPSA
Trigger: GGCAGAAGGTCTGGGTTTGCAGATGGGTGCCCTGAA...CTGTGGCATCACGAAACATTGGATCATGACATGTCGGGCGATGCTTGGAAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp CAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACTTCATTCTTCTGGCCCTCTaGAGAACCAGGGAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: QGSGNLAFRKIPGNSWNFILLAL*RTREAN
Trigger: GTTGGCCTCCCTGGTTCTGCAGAGGGCCAGAAGAAT...GAAGTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp AGTAGCACGATGAGCTCAGATGGACGGAATGCTTATGTGAGCAGACAGACAGGGCCTCCTCGATTTCCCTaGCAGCAGTCTTCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: SSTMSSDGRNAYVSRQTGPPRFP*QQSSSL
Trigger: GAGAGAGGAAGACTGCTGGCAGGGAAATCGAGGAGG...CCCTGTCTGTCTGCTCACATAAGCATTCCGTCCATCTGAGCTCATCGTGCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR GCA 90 bp TCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGAGGCTCCCAGGGATCAGGCTGCAAAGCCATGGCTaGAGACATCAGGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: SPCGFSWLLKYVRLPGIRLQSHG*RHQGSW
Trigger: CCAGCTTCCCTGATGTCTGCAGCCATGGCTTTGCAG...CCTGATCCCTGGGAGCCTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp CAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACTTCCTGCAAAGCCATGGCTaGAGACATCAGGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: QGSGNLAFRKIPGNSWNFLQSHG*RHQGSW
Trigger: CCAGCTTCCCTGATGTCTGCAGCCATGGCTTTGCAG...GAAGTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp AGTTCTAGTCTCGCCTCCTCGATTTCCCTGCCAGCAGTCTTCCTCTCTCTCATTAAGCTCTGTCTGCGCTaGAAAGCCATGGCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: SSSLASSISLPAVFLSLIKLCLR*KAMAAD
Trigger: GTCTGCAGCCATGGCTTTGCAGCGCAGACAGAGCTT...AATGAGAGAGAGGAAGACTGCTGGCAGGGAAATCGAGGAGGCGAGACTAGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp GGTGCCCTTTCTTGTGAGAGTGGCTTTGTCCTTCCCACACACACAATGTGTGCACAGAGAAGCTCTGTCTaGGCTGCAAAGCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: GALSCESGFVLPTHTMCAQRSSV*AAKPWL
Trigger: CAGCCATGGCTTTGCAGCGCAGACAGAGCTTCTCTG...TGCACACATTGTGTGTGTGGGAAGGACAAAGCCACTCTCACAAGAAAGGGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp CAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACTTCCAGAGAAGCTCTGTCTaGGCTGCAAAGCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: QGSGNLAFRKIPGNSWNFQRSSV*AAKPWL
Trigger: CAGCCATGGCTTTGCAGCGCAGACAGAGCTTCTCTG...GAAGTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp GCTCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAGACAGGGAGAGATACTaGAAGCATGTTCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: APRDQGTSLFARSQAIVGDRERY*KHVPLL
Trigger: AAGGAGGGGAACATGCTTGCAGTATCTCTCCCTGTC...TCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR GCA 90 bp AGTGTAACTGTCTGGACAGGTCCAGTTCCTTGGAGAGCAGTCCTGGTGCCCTTTTTCAGGGGGTCACCCTaGCTTATGCGGGAAGTCAAT +
Preference number: 4 (lower is better)
Translates to: SVTVWTGPVPWRAVLVPFFRGSP*LMREVN
Trigger: ATTGACTTCCCGCATAAGGCAGGGTGACCCCCTGAA...AAAGGGCACCAGGACTGCTCTCCAAGGAACTGGACCTGTCCAGACAGTTACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR GCA 90 bp GGCTCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAGAAATCCCTCTGGGTaGTCCCCAAATGTTCCAATC +
Preference number: 4 (lower is better)
Translates to: GSQGSGNLAFRKIPGNSWRNPSG*SPNVPI
Trigger: GATTGGAACATTTGGGGAGCACCCAGAGGGATTTCT...CCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR GCA 90 bp GGCTCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGCAAGATGCAATGTTCTaGCTTCCCTTCCAAGCACAG +
Preference number: 4 (lower is better)
Translates to: GSQGSGNLAFRKIPGNSWQDAMF*LPFQAQ
Trigger: CTGTGCTTGGAAGGGAAGGCAGAACATTGCATCTTG...CCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395352.7
CDS-3UTR CCA 90 bp TTTGAGTCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGAGGCTCCCAGGGCGGCAGGCGCAGGGGTaGATTTCATGCTGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: FESPCGFSWLLKYVRLPGRQAQG*ISCCFP
Trigger: TGGGAAACAGCATGAAATCCACCCCTGCGCCTGCCG...CCCTGGGAGCCTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGACTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp CGTGATGCCACAGCCCTGATCAGACACCAGGGAGGGGTTCCTTTGGTCATGATGAGCCATGGTAAACTCTaGCCACACATATTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: RDATALIRHQGGVPLVMMSHGKL*PHIFQG
Trigger: TCCCTGGAATATGTGTGGCCAGAGTTTACCATGGCT...CATCATGACCAAAGGAACCCCTCCCTGGTGTCTGATCAGGGCTGTGGCATCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp GGCTCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGTGTAGTACCAGTTGTTaGGCAGACGGAAAATGCGGT +
Preference number: 4 (lower is better)
Translates to: GSQGSGNLAFRKIPGNSWCSTSC*ADGKCG
Trigger: ACCGCATTTTCCGTCTGCCCAACAACTGGTACTACA...CCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000524345.5
CDS-3UTR CCA 90 bp CATCAGGGAAGCTGGTGCAGTTCTAGTCTCGCCTCCTCGATTTCCCTGCCAGCATGTAGTACCAGTTGTTaGGCAGACGGAAAATGCGGT +
Preference number: 4 (lower is better)
Translates to: HQGSWCSSSLASSISLPACSTSC*ADGKCG
Trigger: ACCGCATTTTCCGTCTGCCCAACAACTGGTACTACA...TGCTGGCAGGGAAATCGAGGAGGCGAGACTAGAACTGCACCAGCTTCCCTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp TCATTCTTCTGGCCCTCTGCAGAACCAGGGAGGCCAACTGACTTCCACCCATATAGGTGTTGTCCTCACTaGTCAGGGACAGGTAAGAGG +
Preference number: 4 (lower is better)
Translates to: SFFWPSAEPGRPTDFHPYRCCPH*SGTGKR
Trigger: CCTCTTACCTGTCCCTGACCAGTGAGGACAACACCT...ATATGGGTGGAAGTCAGTTGGCCTCCCTGGTTCTGCAGAGGGCCAGAAGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp TCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACCCACCCATATGGCTTTaGTGCAGGAGCAGACCAAAG +
Preference number: 4 (lower is better)
Translates to: SQGSGNLAFRKIPGNSWNPPIWL*CRSRPK
Trigger: CTTTGGTCTGCTCCTGCACCAAAGCCATATGGGTGG...GTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp CCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACTCCACCCATATGGCTTTaGTGCAGGAGCAGACCAAAG +
Preference number: 4 (lower is better)
Translates to: PRDQGTSLFARSQAIVGTPPIWL*CRSRPK
Trigger: CTTTGGTCTGCTCCTGCACCAAAGCCATATGGGTGG...AGTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp TCTTACCTACCCGATCCAGCCAGCCCTTCCACTCTGAAGAGCAGCTGGAAAATGAGACATCAGGGAAGCTaGTGCAGTTCTAGTCTCGCC +
Preference number: 4 (lower is better)
Translates to: SYLPDPASPSTLKSSWKMRHQGS*CSSSLA
Trigger: GGCGAGACTAGAACTGCACCAGCTTCCCTGATGTCT...CATTTTCCAGCTGCTCTTCAGAGTGGAAGGGCTGGCTGGATCGGGTAGGTAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR CCA 90 bp ACATACATGCTGGGCTCTTCCAAGCATCGCCCGACATGTCATGATCCAATGTTTAGCTTGGCCAGGAGTTaGCCTCGTCTGGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: TYMLGSSKHRPTCHDPMFSLARS*PRLGAG
Trigger: ACCTGCTCCCAGACGAGGCCAACTCCTGGCCAAGCT...AAACATTGGATCATGACATGTCGGGCGATGCTTGGAAGAGCCCAGCATGTATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395352.7
CDS-3UTR TCA 90 bp AAGCATACCAGAAGTCCCTATGGATTAGTTAAAGTAGTTCCATTCAGGGCACCCTCAGGCAGGGCGTGGTaGGCACACAGCACAGGCCAT +
Preference number: 4 (lower is better)
Translates to: KHTRSPYGLVKVVPFRAPSGRAW*AHSTGH
Trigger: ATGGCCTGTGCTGTGTGCTCACCACGCCCTGCCTGA...GGGTGCCCTGAATGGAACTACTTTAACTAATCCATAGGGACTTCTGGTATGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR TCA 90 bp TTTGAGTCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGAGGCTCCCAGGGCAGTCCACAGTCTTCTaGCGCAAGGTGACAGGTGAG +
Preference number: 4 (lower is better)
Translates to: FESPCGFSWLLKYVRLPGQSTVF*RKVTGE
Trigger: CTCACCTGTCACCTTGCGTCAGAAGACTGTGGACTG...CCCTGGGAGCCTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGACTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000524345.5
CDS-3UTR TCA 90 bp GCTCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAGAGAAGATGCGAATTTaGGTCTCCATGTGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: APRDQGTSLFARSQAIVGEKMRI*VSMWLL
Trigger: GAGAAGCCACATGGAGACTCAAATTCGCATCTTCTC...TCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000524345.5
CDS-3UTR TCA 90 bp CATCAGGGAAGCTGGTGCAGTTCTAGTCTCGCCTCCTCGATTTCCCTGCCAGCAAGAAGTTCTCTCCAATaGCCTTGGAGTGTAACTGTC +
Preference number: 4 (lower is better)
Translates to: HQGSWCSSSLASSISLPARSSLQ*PWSVTV
Trigger: GACAGTTACACTCCAAGGTCATTGGAGAGAACTTCT...TGCTGGCAGGGAAATCGAGGAGGCGAGACTAGAACTGCACCAGCTTCCCTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp CAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACTTCGTGGAGCATCAGGGCTaGCTGAGATGTTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: QGSGNLAFRKIPGNSWNFVEHQG*LRCSPF
Trigger: GAATGGAGAACATCTCAGGCAGCCCTGATGCTCCAC...GAAGTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000517648.5
ENST00000524345.5
CDS-3UTR GCA 90 bp TCTTACCTACCCGATCCAGCCAGCCCTTCCACTCTGAAGAGCAGCTGGAAAATGTGGAGAAGCAGCCCATaGTACACAGAAGAACTGCAG +
Preference number: 4 (lower is better)
Translates to: SYLPDPASPSTLKSSWKMWRSSP*YTEELQ
Trigger: CTGCAGTTCTTCTGTGTAGCATGGGCTGCTTCTCCA...CATTTTCCAGCTGCTCTTCAGAGTGGAAGGGCTGGCTGGATCGGGTAGGTAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR GCA 90 bp ATAGCTTTCCACCAGCCCCCTTCATCAGAAATCACACGCAGTTTCTCCCCTCGGTGGAGAAGCAGCCCATaGTACACAGAAGAACTGCAG +
Preference number: 4 (lower is better)
Translates to: IAFHQPPSSEITRSFSPRWRSSP*YTEELQ
Trigger: CTGCAGTTCTTCTGTGTAGCATGGGCTGCTTCTCCA...CCGAGGGGAGAAACTGCGTGTGATTTCTGATGAAGGGGGCTGGTGGAAAGCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522432.5
CDS-3UTR GCA 90 bp TGTCAGGAGACGGGTAGTCACTTAGCACGGCAAGGAAGTCGCTATCCAGTCCTGTCTGTCAACTGCTGCTaGTCCAGAATAAACAGGCAG +
Preference number: 4 (lower is better)
Translates to: CQETGSHLARQGSRYPVLSVNCC*SRINRQ
Trigger: CTGCCTGTTTATTCTGGAGCAGCAGCAGTTGACAGA...CAGGACTGGATAGCGACTTCCTTGCCGTGCTAAGTGACTACCCGTCTCCTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522432.5
CDS-3UTR GCA 90 bp GCTCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGATCTCCGTCTGTCAACTaGTGCTGCTCCAGAATAAAC +
Preference number: 4 (lower is better)
Translates to: APRDQGTSLFARSQAIVGSPSVN*CCSRIN
Trigger: GTTTATTCTGGAGCAGCAGCAGTTGACAGACGGAGA...TCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR GCA 90 bp ACATACATGCTGGGCTCTTCCAAGCATCGCCCGACATGTCATGATCCAATGTTTTTTGTGTCTGGCAGCTaGAGCAGCTCCTCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: TYMLGSSKHRPTCHDPMFFVSGS*SSSSAL
Trigger: CAAGGCCGAGGAGCTGCTGCAGCTGCCAGACACAAA...AAACATTGGATCATGACATGTCGGGCGATGCTTGGAAGAGCCCAGCATGTATGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp AGAAGATGCGAATTTGAGTCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGGCTGGAGGCCCTCACTaGTGGGGCAGCCGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: RRCEFESPCGFSWLLKYVAGGPH*WGSRAL
Trigger: CAAAGCACGGCTGCCCCAGCAGTGAGGGCCTCCAGC...CACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGACTCAAATTCGCATCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000524345.5
CDS-3UTR GCA 90 bp TCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACACAGGTAAGAGGCAATaGTCTCTCGAAGGCCATAGC +
Preference number: 4 (lower is better)
Translates to: SQGSGNLAFRKIPGNSWNTGKRQ*SLEGHS
Trigger: GCTATGGCCTTCGAGAGAGCATTGCCTCTTACCTGT...GTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR GCA 90 bp CCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACTACAGGTAAGAGGCAATaGTCTCTCGAAGGCCATAGC +
Preference number: 4 (lower is better)
Translates to: PRDQGTSLFARSQAIVGTTGKRQ*SLEGHS
Trigger: GCTATGGCCTTCGAGAGAGCATTGCCTCTTACCTGT...AGTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR GCA 90 bp GCTCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAAGCTCTTTCTCTTGCTaGCACCATACATCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: APRDQGTSLFARSQAIVGSSFSC*HHTSGR
Trigger: TCTCCCTGATGTATGGTGGCAGCAAGAGAAAGAGCT...TCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR GCA 90 bp CTGGGCTCTTCCAAGCATCGCCCGACATGTCATGATCCAATGTTTCGTGATGCCTCTCCCTCTCAGGCTTaGCCATACAGAAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: LGSSKHRPTCHDPMFRDASPSQA*PYRSSL
Trigger: GAGAGAACTTCTGTATGGGCAAGCCTGAGAGGGAGA...GGCATCACGAAACATTGGATCATGACATGTCGGGCGATGCTTGGAAGAGCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp TTTGAGTCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGAGGCTCCCAGGGATTCTTCTGGCCCTCTaGAGAACCAGGGAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: FESPCGFSWLLKYVRLPGILLAL*RTREAN
Trigger: GTTGGCCTCCCTGGTTCTGCAGAGGGCCAGAAGAAT...CCCTGGGAGCCTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGACTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp CATATGGCTTTGGTGCAGGAGCAGACCAAAGGTATCTCCCAATTGAAGGCTAAGCTGCAGAGGGATTGCTaGGTGCAGAGTCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: HMALVQEQTKGISQLKAKLQRDC*VQSHCL
Trigger: GAGGCAGTGACTCTGCACCCAGCAATCCCTCTGCAG...CTTAGCCTTCAATTGGGAGATACCTTTGGTCTGCTCCTGCACCAAAGCCATATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR CCA 90 bp GCTCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAAGCCATGGTAAACTCTaGCCACACATATTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: APRDQGTSLFARSQAIVGSHGKL*PHIFQG
Trigger: TCCCTGGAATATGTGTGGCCAGAGTTTACCATGGCT...TCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR CCA 90 bp CAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACTTCAGGTGTTGTCCTCACTaGTCAGGGACAGGTAAGAGG +
Preference number: 4 (lower is better)
Translates to: QGSGNLAFRKIPGNSWNFRCCPH*SGTGKR
Trigger: CCTCTTACCTGTCCCTGACCAGTGAGGACAACACCT...GAAGTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR CCA 90 bp TCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGAGGCTCCCAGGGATCAGGAGGTGTTGTCCTCACTaGTCAGGGACAGGTAAGAGG +
Preference number: 4 (lower is better)
Translates to: SPCGFSWLLKYVRLPGIRRCCPH*SGTGKR
Trigger: CCTCTTACCTGTCCCTGACCAGTGAGGACAACACCT...CCTGATCCCTGGGAGCCTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000524345.5
CDS-3UTR CCA 90 bp CCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACTTGCATACATACATGCTaGGCTCTTCCAAGCATCGCC +
Preference number: 4 (lower is better)
Translates to: PRDQGTSLFARSQAIVGTCIHTC*ALPSIA
Trigger: GGCGATGCTTGGAAGAGCCCAGCATGTATGTATGCA...AGTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp CATATGGCTTTGGTGCAGGAGCAGACCAAAGGTATCTCCCAATTGAAGGCTAAGACAGGTCCAGTTCCTTaGAGAGCAGTCCTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: HMALVQEQTKGISQLKAKTGPVP*RAVLVP
Trigger: GGGCACCAGGACTGCTCTCCAAGGAACTGGACCTGT...CTTAGCCTTCAATTGGGAGATACCTTTGGTCTGCTCCTGCACCAAAGCCATATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp CCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACTACTGAGAAATCCCTCTaGGTGCTCCCCAAATGTTCC +
Preference number: 4 (lower is better)
Translates to: PRDQGTSLFARSQAIVGTTEKSL*VLPKCS
Trigger: GGAACATTTGGGGAGCACCCAGAGGGATTTCTCAGT...AGTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR CCA 90 bp CTGGGCTCTTCCAAGCATCGCCCGACATGTCATGATCCAATGTTTCGTGATGCCCCTGAGCCCTCCAAGTaGAGAATGACCCAGTTTAGA +
Preference number: 4 (lower is better)
Translates to: LGSSKHRPTCHDPMFRDAPEPSK*RMTQFR
Trigger: TCTAAACTGGGTCATTCTCCACTTGGAGGGCTCAGG...GGCATCACGAAACATTGGATCATGACATGTCGGGCGATGCTTGGAAGAGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427060.6
CDS-3UTR TCA 90 bp CATATGGCTTTGGTGCAGGAGCAGACCAAAGGTATCTCCCAATTGAAGGCTAAGAGCATCAGGGCTGCCTaGGATGTTCTCCATTCGCAG +
Preference number: 4 (lower is better)
Translates to: HMALVQEQTKGISQLKAKSIRAA*DVLHSQ
Trigger: CTGCGAATGGAGAACATCTCAGGCAGCCCTGATGCT...CTTAGCCTTCAATTGGGAGATACCTTTGGTCTGCTCCTGCACCAAAGCCATATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338087.10
ENST00000395352.7
CDS-3UTR TCA 90 bp CTATTCTTACCTACCCGATCCAGCCAGCCCTTCCACTCTGAAGAGCAGCTGGAAGAGAAGATGCGAATTTaGGTCTCCATGTGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LFLPTRSSQPFHSEEQLEEKMRI*VSMWLL
Trigger: GAGAAGCCACATGGAGACTCAAATTCGCATCTTCTC...TTCCAGCTGCTCTTCAGAGTGGAAGGGCTGGCTGGATCGGGTAGGTAAGAATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR TCA 90 bp TTTGAGTCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGAGGCTCCCAGGGTGGTGCCCTTTCTTGTaGGAGTGGCTTTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: FESPCGFSWLLKYVRLPGWCPFL*EWLCPS
Trigger: GGAAGGACAAAGCCACTCTCACAAGAAAGGGCACCA...CCCTGGGAGCCTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGACTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR TCA 90 bp GTGCAGACATCTGGAGTTCAGGGGGTCACCCTGCCTTATGCGGGAAGTCAATGTAGAAGTTCTCTCCAATaGCCTTGGAGTGTAACTGTC +
Preference number: 4 (lower is better)
Translates to: VQTSGVQGVTLPYAGSQCRSSLQ*PWSVTV
Trigger: GACAGTTACACTCCAAGGTCATTGGAGAGAACTTCT...ACATTGACTTCCCGCATAAGGCAGGGTGACCCCCTGAACTCCAGATGTCTGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR TCA 90 bp GGCTCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAAGGTATCTCCCAATTaGAGGCTAAGAAGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: GSQGSGNLAFRKIPGNSWKVSPN*RLRSPL
Trigger: CAAAGGACTTCTTAGCCTTCAATTGGGAGATACCTT...CCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR TCA 90 bp CGTGATGCCACAGCCCTGATCAGACACCAGGGAGGGGTTCCTTTGGTCATGATGAAGGTATCTCCCAATTaGAGGCTAAGAAGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: RDATALIRHQGGVPLVMMKVSPN*RLRSPL
Trigger: CAAAGGACTTCTTAGCCTTCAATTGGGAGATACCTT...CATCATGACCAAAGGAACCCCTCCCTGGTGTCTGATCAGGGCTGTGGCATCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR TCA 90 bp ATGGCTTTGGTGCAGGAGCAGACCAAAGGTATCTCCCAATTGAAGGCTAAGAAGACCAGGGAGGCCAACTaGCTTCCACCCATATGGCTT +
Preference number: 4 (lower is better)
Translates to: MALVQEQTKGISQLKAKKTREAN*LPPIWL
Trigger: AAGCCATATGGGTGGAAGTCAGTTGGCCTCCCTGGT...CTTCTTAGCCTTCAATTGGGAGATACCTTTGGTCTGCTCCTGCACCAAAGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR TCA 90 bp GGTGCCCTTTCTTGTGAGAGTGGCTTTGTCCTTCCCACACACACAATGTGTGCAATACCAGTAGCACGATaGGCTCAGATGGACGGAATG +
Preference number: 4 (lower is better)
Translates to: GALSCESGFVLPTHTMCAIPVAR*AQMDGM
Trigger: CATTCCGTCCATCTGAGCTCATCGTGCTACTGGTAT...TGCACACATTGTGTGTGTGGGAAGGACAAAGCCACTCTCACAAGAAAGGGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR TCA 90 bp TCATTCTTCTGGCCCTCTGCAGAACCAGGGAGGCCAACTGACTTCCACCCATATTGGCAGCTTGCTTCTTaGAAGGCGGCTGTTTATATG +
Preference number: 4 (lower is better)
Translates to: SFFWPSAEPGRPTDFHPYWQLAS*KAAVYM
Trigger: CATATAAACAGCCGCCTTTCAAGAAGCAAGCTGCCA...ATATGGGTGGAAGTCAGTTGGCCTCCCTGGTTCTGCAGAGGGCCAGAAGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427060.6
CDS-3UTR GCA 90 bp CATATGGCTTTGGTGCAGGAGCAGACCAAAGGTATCTCCCAATTGAAGGCTAAGTGGGTGCAGAGTCACTaGCTCTCCGTCTGTCAACTG +
Preference number: 4 (lower is better)
Translates to: HMALVQEQTKGISQLKAKWVQSH*LSVCQL
Trigger: CAGTTGACAGACGGAGAGGCAGTGACTCTGCACCCA...CTTAGCCTTCAATTGGGAGATACCTTTGGTCTGCTCCTGCACCAAAGCCATATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR GCA 90 bp AGCTTTCCACCAGCCCCCTTCATCAGAAATCACACGCAGTTTCTCCCCTCGGCGCAGGGGTGGATTTCATaGTGTTTCCCATTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SFPPAPFIRNHTQFLPSAQGWIS*CFPFLS
Trigger: AGAAAGAAATGGGAAACAGCATGAAATCCACCCCTG...CGCCGAGGGGAGAAACTGCGTGTGATTTCTGATGAAGGGGGCTGGTGGAAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522432.5
CDS-3UTR GCA 90 bp AGAAGATGCGAATTTGAGTCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGCCTCGGCCTTGTCTCTaGCCAGGCCCTCAAACAGCC +
Preference number: 4 (lower is better)
Translates to: RRCEFESPCGFSWLLKYVPRPCL*PGPQTA
Trigger: GGCTGTTTGAGGGCCTGGGCAGAGACAAGGCCGAGG...CACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGACTCAAATTCGCATCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000524345.5
CDS-3UTR GCA 90 bp TCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACAGCTCTTTCTCTTGCTaGCACCATACATCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: SQGSGNLAFRKIPGNSWNSSFSC*HHTSGR
Trigger: TCTCCCTGATGTATGGTGGCAGCAAGAGAAAGAGCT...GTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR GCA 90 bp TCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACATGAGCTCTTTCTCTTaGTGCCACCATACATCAGGG +
Preference number: 4 (lower is better)
Translates to: SQGSGNLAFRKIPGNSWNMSSFS*CHHTSG
Trigger: CCCTGATGTATGGTGGCAGCAAGAGAAAGAGCTCAT...GTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR GCA 90 bp AGTTCTAGTCTCGCCTCCTCGATTTCCCTGCCAGCAGTCTTCCTCTCTCTCATTTCTCCCTCTCAGGCTTaGCCATACAGAAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: SSSLASSISLPAVFLSLISPSQA*PYRSSL
Trigger: GAGAGAACTTCTGTATGGGCAAGCCTGAGAGGGAGA...AATGAGAGAGAGGAAGACTGCTGGCAGGGAAATCGAGGAGGCGAGACTAGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp TCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGAGGCTCCCAGGGATCAGGCCCATATGGCTTTGGTaGAGGAGCAGACCAAAGGTA +
Preference number: 4 (lower is better)
Translates to: SPCGFSWLLKYVRLPGIRPIWLW*RSRPKV
Trigger: TACCTTTGGTCTGCTCCTGCACCAAAGCCATATGGG...CCTGATCCCTGGGAGCCTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp CATATGGCTTTGGTGCAGGAGCAGACCAAAGGTATCTCCCAATTGAAGGCTAAGCATCAGGGAAGCTGGTaGAGTTCTAGTCTCGCCTCC +
Preference number: 4 (lower is better)
Translates to: HMALVQEQTKGISQLKAKHQGSW*SSSLAS
Trigger: GGAGGCGAGACTAGAACTGCACCAGCTTCCCTGATG...CTTAGCCTTCAATTGGGAGATACCTTTGGTCTGCTCCTGCACCAAAGCCATATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp TCTTACCTACCCGATCCAGCCAGCCCTTCCACTCTGAAGAGCAGCTGGAAAATGCTCAGATGGACGGAATaGTTATGTGAGCAGACAGAC +
Preference number: 4 (lower is better)
Translates to: SYLPDPASPSTLKSSWKMLRWTE*LCEQTD
Trigger: GTCTGTCTGCTCACATAAGCATTCCGTCCATCTGAG...CATTTTCCAGCTGCTCTTCAGAGTGGAAGGGCTGGCTGGATCGGGTAGGTAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR CCA 90 bp TCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACAGCCATGGTAAACTCTaGCCACACATATTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SQGSGNLAFRKIPGNSWNSHGKL*PHIFQG
Trigger: TCCCTGGAATATGTGTGGCCAGAGTTTACCATGGCT...GTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR CCA 90 bp AAGCATACCAGAAGTCCCTATGGATTAGTTAAAGTAGTTCCATTCAGGGCACCCAGGTCCTCCAGGCACTaGAAGGTGAGCCTCGGGGAA +
Preference number: 4 (lower is better)
Translates to: KHTRSPYGLVKVVPFRAPRSSRH*KVSLGE
Trigger: TTCCCCGAGGCTCACCTTCCAGTGCCTGGAGGACCT...GGGTGCCCTGAATGGAACTACTTTAACTAATCCATAGGGACTTCTGGTATGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp TCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGAGGCTCCCAGGGATCAGGTGGAGTGTAACTGTCTaGACAGGTCCAGTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SPCGFSWLLKYVRLPGIRWSVTV*TGPVPW
Trigger: CCAAGGAACTGGACCTGTCCAGACAGTTACACTCCA...CCTGATCCCTGGGAGCCTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp TCTTACCTACCCGATCCAGCCAGCCCTTCCACTCTGAAGAGCAGCTGGAAAATGCTAGTAGGATTTGGATaGGAGCTTCTCCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SYLPDPASPSTLKSSWKMLVGFG*ELLLLW
Trigger: CCAGAGAAGGAGAAGCTCCCATCCAAATCCTACTAG...CATTTTCCAGCTGCTCTTCAGAGTGGAAGGGCTGGCTGGATCGGGTAGGTAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR CCA 90 bp AGTGTAACTGTCTGGACAGGTCCAGTTCCTTGGAGAGCAGTCCTGGTGCCCTTTCATCAGTCGCTGTCATaGGGAATTTCTCCCCCTTTT +
Preference number: 4 (lower is better)
Translates to: SVTVWTGPVPWRAVLVPFHQSLS*GISPPF
Trigger: AAAAGGGGGAGAAATTCCCCATGACAGCGACTGATG...AAAGGGCACCAGGACTGCTCTCCAAGGAACTGGACCTGTCCAGACAGTTACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395352.7
CDS-3UTR TCA 90 bp GCTCTTCCAAGCATCGCCCGACATGTCATGATCCAATGTTTCGTGATGCCACAGGTGTCTCACCGACAGTaGGTAAAACCCTTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: ALPSIARHVMIQCFVMPQVSHRQ*VKPFLG
Trigger: ACCAAGAAAGGGTTTTACTCACTGTCGGTGAGACAC...CTGTGGCATCACGAAACATTGGATCATGACATGTCGGGCGATGCTTGGAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR TCA 90 bp GCTCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGATGTTCCTTTTGGGCATaGACCATTGTGTCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: APRDQGTSLFARSQAIVGCSFWA*TIVSVL
Trigger: AAGAACAGACACAATGGTTCATGCCCAAAAGGAACA...TCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR TCA 90 bp AGTTCTAGTCTCGCCTCCTCGATTTCCCTGCCAGCAGTCTTCCTCTCTCTCATTGAGAAGATGCGAATTTaGGTCTCCATGTGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SSSLASSISLPAVFLSLIEKMRI*VSMWLL
Trigger: GAGAAGCCACATGGAGACTCAAATTCGCATCTTCTC...AATGAGAGAGAGGAAGACTGCTGGCAGGGAAATCGAGGAGGCGAGACTAGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR TCA 90 bp GGTGCCCTTTCTTGTGAGAGTGGCTTTGTCCTTCCCACACACACAATGTGTGCAGTTGGCTGGTTCCTTTaGAATAGCCTTTTGGAACGG +
Preference number: 4 (lower is better)
Translates to: GALSCESGFVLPTHTMCAVGWFL*NSLLER
Trigger: CCGTTCCAAAAGGCTATTTCAAAGGAACCAGCCAAC...TGCACACATTGTGTGTGTGGGAAGGACAAAGCCACTCTCACAAGAAAGGGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR GCA 90 bp ACATACATGCTGGGCTCTTCCAAGCATCGCCCGACATGTCATGATCCAATGTTTGAGCAAGCTTCTCTCTaGAAGGACGGTGGAGCATCA +
Preference number: 4 (lower is better)
Translates to: TYMLGSSKHRPTCHDPMFEQASL*KDGGAS
Trigger: TGATGCTCCACCGTCCTTGCAGAGAGAAGCTTGCTC...AAACATTGGATCATGACATGTCGGGCGATGCTTGGAAGAGCCCAGCATGTATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR GCA 90 bp GGATTTGGATGGGAGCTTCTCCTTCTCTGGCTATACATTGTGTTTTCTCCCTTGTGTCTGCAGAGGGATTaGTGGGTGCAGAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: GFGWELLLLWLYIVFSPLCLQRD*WVQSHC
Trigger: GCAGTGACTCTGCACCCAGCAATCCCTCTGCAGACA...CAAGGGAGAAAACACAATGTATAGCCAGAGAAGGAGAAGCTCCCATCCAAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR GCA 90 bp TTTGAGTCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGAGGCTCCCAGGGTGGGCAGACGGAAAATaGGGTAATGCTTTACCTGCC +
Preference number: 4 (lower is better)
Translates to: FESPCGFSWLLKYVRLPGWADGK*GNALPA
Trigger: GGCAGGTAAAGCATTACCGCATTTTCCGTCTGCCCA...CCCTGGGAGCCTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGACTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000524345.5
CDS-3UTR GCA 90 bp CAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACTTCAGCTCTTTCTCTTGCTaGCACCATACATCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: QGSGNLAFRKIPGNSWNFSSFSC*HHTSGR
Trigger: TCTCCCTGATGTATGGTGGCAGCAAGAGAAAGAGCT...GAAGTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR GCA 90 bp TTGGCTGGTTCCTTTGAAATAGCCTTTTGGAACGGTTGGGGAAACCACAGATGTTTCAGGGCACCCATCTaGAAACCCAGACCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LAGSFEIAFWNGWGNHRCFRAPI*KPRPSA
Trigger: GGCAGAAGGTCTGGGTTTGCAGATGGGTGCCCTGAA...ACATCTGTGGTTTCCCCAACCGTTCCAAAAGGCTATTTCAAAGGAACCAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR CCA 90 bp AGTTCTAGTCTCGCCTCCTCGATTTCCCTGCCAGCAGTCTTCCTCTCTCTCATTAGCCATGGTAAACTCTaGCCACACATATTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SSSLASSISLPAVFLSLISHGKL*PHIFQG
Trigger: TCCCTGGAATATGTGTGGCCAGAGTTTACCATGGCT...AATGAGAGAGAGGAAGACTGCTGGCAGGGAAATCGAGGAGGCGAGACTAGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp AGTAGCACGATGAGCTCAGATGGACGGAATGCTTATGTGAGCAGACAGACAGGGTGTAGTACCAGTTGTTaGGCAGACGGAAAATGCGGT +
Preference number: 4 (lower is better)
Translates to: SSTMSSDGRNAYVSRQTGCSTSC*ADGKCG
Trigger: ACCGCATTTTCCGTCTGCCCAACAACTGGTACTACA...CCCTGTCTGTCTGCTCACATAAGCATTCCGTCCATCTGAGCTCATCGTGCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR CCA 90 bp ATGTTTCGTGATGCCACAGCCCTGATCAGACACCAGGGAGGGGTTCCTTTGGTCCATTGTGTCTGTTCTTaGCTAGTCCTCAAAGTAAGG +
Preference number: 4 (lower is better)
Translates to: MFRDATALIRHQGGVPLVHCVCS*LVLKVR
Trigger: CCTTACTTTGAGGACTAGCCAAGAACAGACACAATG...GACCAAAGGAACCCCTCCCTGGTGTCTGATCAGGGCTGTGGCATCACGAAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp GGCTCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGCCTTTGGTCATGATGTaGATAGAGAAGATGCGAATT +
Preference number: 4 (lower is better)
Translates to: GSQGSGNLAFRKIPGNSWPLVMM*IEKMRI
Trigger: AATTCGCATCTTCTCTATCCACATCATGACCAAAGG...CCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp CATCCCAGAGAAGCTCTGTCTGCGCTGCAAAGCCATGGCTGCAGACATCAGGGACCTTTGGTCATGATGTaGATAGAGAAGATGCGAATT +
Preference number: 4 (lower is better)
Translates to: HPREALSALQSHGCRHQGPLVMM*IEKMRI
Trigger: AATTCGCATCTTCTCTATCCACATCATGACCAAAGG...TCCCTGATGTCTGCAGCCATGGCTTTGCAGCGCAGACAGAGCTTCTCTGGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp TTTGAGTCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGAGGCTCCCAGGGTGCATACATACATGCTaGGCTCTTCCAAGCATCGCC +
Preference number: 4 (lower is better)
Translates to: FESPCGFSWLLKYVRLPGCIHTC*ALPSIA
Trigger: GGCGATGCTTGGAAGAGCCCAGCATGTATGTATGCA...CCCTGGGAGCCTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGACTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp GTAACTGCACATACACATACCAGTAGCACGATGAGCTCAGATGGACGGAATGCTCCACCCATATGGCTTTaGTGCAGGAGCAGACCAAAG +
Preference number: 4 (lower is better)
Translates to: VTAHTHTSSTMSSDGRNAPPIWL*CRSRPK
Trigger: CTTTGGTCTGCTCCTGCACCAAAGCCATATGGGTGG...AGCATTCCGTCCATCTGAGCTCATCGTGCTACTGGTATGTGTATGTGCAGTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR CCA 90 bp AGTTCTAGTCTCGCCTCCTCGATTTCCCTGCCAGCAGTCTTCCTCTCTCTCATTTGTGAACACCTCTGTTaGGGGTTAGGACTTACGCAT +
Preference number: 4 (lower is better)
Translates to: SSSLASSISLPAVFLSLICEHLC*GLGLTH
Trigger: ATGCGTAAGTCCTAACCCCCAACAGAGGTGTTCACA...AATGAGAGAGAGGAAGACTGCTGGCAGGGAAATCGAGGAGGCGAGACTAGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR CCA 90 bp ATGGCTTTGGTGCAGGAGCAGACCAAAGGTATCTCCCAATTGAAGGCTAAGAAGTACTGTGCAGACATCTaGAGTTCAGGGGGTCACCCT +
Preference number: 4 (lower is better)
Translates to: MALVQEQTKGISQLKAKKYCADI*SSGGHP
Trigger: AGGGTGACCCCCTGAACTCCAGATGTCTGCACAGTA...CTTCTTAGCCTTCAATTGGGAGATACCTTTGGTCTGCTCCTGCACCAAAGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338087.10
3UTR CAA 72 bp TCAGGCTTGCCCATACAGAAGTTCTCTCCAATGACCTaGGAGTGTAACTGTCTGGACAGGTCCAGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: SGLPIQKFSPMT*ECNCLDRSSSL
Trigger: CAAGGAACTGGACCTGTCCAGACAGTTACACTCCAAGGTCATTGGAGAGAACTTCTGTATGGGCAAGCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR TCA 90 bp TTTGAGTCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGAGGCTCCCAGGGGTGTCTCACCGACAGTaGGTAAAACCCTTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: FESPCGFSWLLKYVRLPGVSHRQ*VKPFLG
Trigger: ACCAAGAAAGGGTTTTACTCACTGTCGGTGAGACAC...CCCTGGGAGCCTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGACTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000524345.5
CDS-3UTR TCA 90 bp AGTTCTAGTCTCGCCTCCTCGATTTCCCTGCCAGCAGTCTTCCTCTCTCTCATTAGAAGTTCTCTCCAATaGCCTTGGAGTGTAACTGTC +
Preference number: 4 (lower is better)
Translates to: SSSLASSISLPAVFLSLIRSSLQ*PWSVTV
Trigger: GACAGTTACACTCCAAGGTCATTGGAGAGAACTTCT...AATGAGAGAGAGGAAGACTGCTGGCAGGGAAATCGAGGAGGCGAGACTAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR TCA 90 bp TTGGCTGGTTCCTTTGAAATAGCCTTTTGGAACGGTTGGGGAAACCACAGATGTAGAGCAGCTGGAAAATaGGCTCCTGAGTGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: LAGSFEIAFWNGWGNHRCRAAGK*APECPS
Trigger: TGAGGGACACTCAGGAGCTCATTTTCCAGCTGCTCT...ACATCTGTGGTTTCCCCAACCGTTCCAAAAGGCTATTTCAAAGGAACCAGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR TCA 90 bp AGTAGCACGATGAGCTCAGATGGACGGAATGCTTATGTGAGCAGACAGACAGGGCATCTTTCCTGGAGCTaGGCATTTTTCCTCATATGG +
Preference number: 4 (lower is better)
Translates to: SSTMSSDGRNAYVSRQTGHLSWS*AFFLIW
Trigger: CCATATGAGGAAAAATGCTCAGCTCCAGGAAAGATG...CCCTGTCTGTCTGCTCACATAAGCATTCCGTCCATCTGAGCTCATCGTGCTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR TCA 90 bp ATGGCTTTGGTGCAGGAGCAGACCAAAGGTATCTCCCAATTGAAGGCTAAGAAGCCTCCAAGTGGAGAATaGCCCAGTTTAGAGAGCATC +
Preference number: 4 (lower is better)
Translates to: MALVQEQTKGISQLKAKKPPSGE*PSLESI
Trigger: GATGCTCTCTAAACTGGGTCATTCTCCACTTGGAGG...CTTCTTAGCCTTCAATTGGGAGATACCTTTGGTCTGCTCCTGCACCAAAGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427060.6
CDS-3UTR GCA 90 bp TCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACCAGGGGTGGATTTCATaGTGTTTCCCATTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SQGSGNLAFRKIPGNSWNQGWIS*CFPFLS
Trigger: AGAAAGAAATGGGAAACAGCATGAAATCCACCCCTG...GTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
CDS-3UTR GCA 90 bp ATGGCTTTGGTGCAGGAGCAGACCAAAGGTATCTCCCAATTGAAGGCTAAGAAGTGGGCAGACGGAAAATaGGGTAATGCTTTACCTGCC +
Preference number: 4 (lower is better)
Translates to: MALVQEQTKGISQLKAKKWADGK*GNALPA
Trigger: GGCAGGTAAAGCATTACCGCATTTTCCGTCTGCCCA...CTTCTTAGCCTTCAATTGGGAGATACCTTTGGTCTGCTCCTGCACCAAAGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp TTTCCTCTCCCTCTCAGGCTTGCCCATACAGAAGTTCTCTCCAATGACCTTGGAATGAGCTCTTTCTCTTaGTGCCACCATACATCAGGG +
Preference number: 4 (lower is better)
Translates to: FPLPLRLAHTEVLSNDLGMSSFS*CHHTSG
Trigger: CCCTGATGTATGGTGGCAGCAAGAGAAAGAGCTCAT...TCCAAGGTCATTGGAGAGAACTTCTGTATGGGCAAGCCTGAGAGGGAGAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp GGTGCCCTTTCTTGTGAGAGTGGCTTTGTCCTTCCCACACACACAATGTGTGCACACACACACAATGTGTaGATACATACATGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GALSCESGFVLPTHTMCAHTHNV*IHTCWA
Trigger: AGCCCAGCATGTATGTATGCACACATTGTGTGTGTG...TGCACACATTGTGTGTGTGGGAAGGACAAAGCCACTCTCACAAGAAAGGGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp TCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGAGGCTCCCAGGGATCAGGCACACACACAATGTGTaGATACATACATGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SPCGFSWLLKYVRLPGIRHTHNV*IHTCWA
Trigger: AGCCCAGCATGTATGTATGCACACATTGTGTGTGTG...CCTGATCCCTGGGAGCCTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp AGTTCTAGTCTCGCCTCCTCGATTTCCCTGCCAGCAGTCTTCCTCTCTCTCATTCACACACACAATGTGTaGATACATACATGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SSSLASSISLPAVFLSLIHTHNV*IHTCWA
Trigger: AGCCCAGCATGTATGTATGCACACATTGTGTGTGTG...AATGAGAGAGAGGAAGACTGCTGGCAGGGAAATCGAGGAGGCGAGACTAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp AAGCATACCAGAAGTCCCTATGGATTAGTTAAAGTAGTTCCATTCAGGGCACCCATTCTTCTGGCCCTCTaGAGAACCAGGGAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: KHTRSPYGLVKVVPFRAPILLAL*RTREAN
Trigger: GTTGGCCTCCCTGGTTCTGCAGAGGGCCAGAAGAAT...GGGTGCCCTGAATGGAACTACTTTAACTAATCCATAGGGACTTCTGGTATGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp TCCTTTGAAATAGCCTTTTGGAACGGTTGGGGAAACCACAGATGTCTCCTTGTACATCAGGGAAGCTGGTaGAGTTCTAGTCTCGCCTCC +
Preference number: 4 (lower is better)
Translates to: SFEIAFWNGWGNHRCLLVHQGSW*SSSLAS
Trigger: GGAGGCGAGACTAGAACTGCACCAGCTTCCCTGATG...TACAAGGAGACATCTGTGGTTTCCCCAACCGTTCCAAAAGGCTATTTCAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR GCA 90 bp AAGCATACCAGAAGTCCCTATGGATTAGTTAAAGTAGTTCCATTCAGGGCACCCCAGAGAAGCTCTGTCTaGGCTGCAAAGCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: KHTRSPYGLVKVVPFRAPQRSSV*AAKPWL
Trigger: CAGCCATGGCTTTGCAGCGCAGACAGAGCTTCTCTG...GGGTGCCCTGAATGGAACTACTTTAACTAATCCATAGGGACTTCTGGTATGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp TCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGAGGCTCCCAGGGATCAGGATTTTTCTGGCAGCTTaGTTCTTGAAAGGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: SPCGFSWLLKYVRLPGIRIFLAA*FLKGGC
Trigger: ACAGCCGCCTTTCAAGAAGCAAGCTGCCAGAAAAAT...CCTGATCCCTGGGAGCCTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427060.6
CDS-3UTR GCA 90 bp GCAATAAATGAATACTTGATGCATTCATACAGGCAAGAATCCCAGCATCCCAGAGGGGAAAGTCAACCGTaGCCTGAGCCCTCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: AINEYLMHSYRQESQHPRGESQP*PEPSKW
Trigger: CCACTTGGAGGGCTCAGGGCACGGTTGACTTTCCCC...TCTGGGATGCTGGGATTCTTGCCTGTATGAATGCATCAAGTATTCATTTATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427060.6
CDS-3UTR CCA 90 bp TTTCCTCTCCCTCTCAGGCTTGCCCATACAGAAGTTCTCTCCAATGACCTTGGAAGCCATGGTAAACTCTaGCCACACATATTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: FPLPLRLAHTEVLSNDLGSHGKL*PHIFQG
Trigger: TCCCTGGAATATGTGTGGCCAGAGTTTACCATGGCT...TCCAAGGTCATTGGAGAGAACTTCTGTATGGGCAAGCCTGAGAGGGAGAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp TGTCCCTCACCTGTCTCTAATTCCATCCTAAGCCATGAGCTGATTTCTCTTTTTGGTCCTCCTGCAGTCTaGACACTCTCCTCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: CPSPVSNSILSHELISLFGPPAV*TLSSSP
Trigger: TGGACTGGAGGAGAGTGTCCAGACTGCAGGAGGACC...AAAAAGAGAAATCAGCTCATGGCTTAGGATGGAATTAGAGACAGGTGAGGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR CCA 90 bp CTATTCTTACCTACCCGATCCAGCCAGCCCTTCCACTCTGAAGAGCAGCTGGAACATTGTGTCTGTTCTTaGCTAGTCCTCAAAGTAAGG +
Preference number: 4 (lower is better)
Translates to: LFLPTRSSQPFHSEEQLEHCVCS*LVLKVR
Trigger: CCTTACTTTGAGGACTAGCCAAGAACAGACACAATG...TTCCAGCTGCTCTTCAGAGTGGAAGGGCTGGCTGGATCGGGTAGGTAAGAATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR CCA 90 bp CTGGGCTCTTCCAAGCATCGCCCGACATGTCATGATCCAATGTTTCGTGATGCCTTTGAAATAGCCTTTTaGAACGGTTGGGGAAACCAC +
Preference number: 4 (lower is better)
Translates to: LGSSKHRPTCHDPMFRDAFEIAF*NGWGNH
Trigger: GTGGTTTCCCCAACCGTTCCAAAAGGCTATTTCAAA...GGCATCACGAAACATTGGATCATGACATGTCGGGCGATGCTTGGAAGAGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR TCA 90 bp CAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACTTCAAGGTATCTCCCAATTaGAGGCTAAGAAGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: QGSGNLAFRKIPGNSWNFKVSPN*RLRSPL
Trigger: CAAAGGACTTCTTAGCCTTCAATTGGGAGATACCTT...GAAGTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR TCA 90 bp TTGGAACGGTTGGGGAAACCACAGATGTCTCCTTGTATAAACACACTAGAATCTACCAGGGAGGCCAACTaGCTTCCACCCATATGGCTT +
Preference number: 4 (lower is better)
Translates to: LERLGKPQMSPCINTLESTREAN*LPPIWL
Trigger: AAGCCATATGGGTGGAAGTCAGTTGGCCTCCCTGGT...AGATTCTAGTGTGTTTATACAAGGAGACATCTGTGGTTTCCCCAACCGTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR TCA 90 bp GGATTTGGATGGGAGCTTCTCCTTCTCTGGCTATACATTGTGTTTTCTCCCTTGTGTAATGCTTCCCACTaGGAAATCCCTCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: GFGWELLLLWLYIVFSPLCNASH*EIPLGA
Trigger: AGCACCCAGAGGGATTTCTCAGTGGGAAGCATTACA...CAAGGGAGAAAACACAATGTATAGCCAGAGAAGGAGAAGCTCCCATCCAAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR TCA 90 bp CCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACTGTAGCAGCTTTCTATTaGAATTCTTCATCAGTCGCT +
Preference number: 4 (lower is better)
Translates to: PRDQGTSLFARSQAIVGTVAAFY*NSSSVA
Trigger: AGCGACTGATGAAGAATTTCAATAGAAAGCTGCTAC...AGTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395352.7
CDS-3UTR GCA 90 bp TCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGAGGCTCCCAGGGATCAGGCAGGGGTGGATTTCATaGTGTTTCCCATTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SPCGFSWLLKYVRLPGIRQGWIS*CFPFLS
Trigger: AGAAAGAAATGGGAAACAGCATGAAATCCACCCCTG...CCTGATCCCTGGGAGCCTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp TTGGCTGGTTCCTTTGAAATAGCCTTTTGGAACGGTTGGGGAAACCACAGATGTTGGGCAGACGGAAAATaGGGTAATGCTTTACCTGCC +
Preference number: 4 (lower is better)
Translates to: LAGSFEIAFWNGWGNHRCWADGK*GNALPA
Trigger: GGCAGGTAAAGCATTACCGCATTTTCCGTCTGCCCA...ACATCTGTGGTTTCCCCAACCGTTCCAAAAGGCTATTTCAAAGGAACCAGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR GCA 90 bp GCTCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGACATACATCAGGGAGATaGTTTTCTTCTTTCGATCAA +
Preference number: 4 (lower is better)
Translates to: APRDQGTSLFARSQAIVGHTSGR*FSSFDQ
Trigger: TTGATCGAAAGAAGAAAAGCATCTCCCTGATGTATG...TCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR GCA 90 bp CATATGGCTTTGGTGCAGGAGCAGACCAAAGGTATCTCCCAATTGAAGGCTAAGAGCTCTTTCTCTTGCTaGCACCATACATCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: HMALVQEQTKGISQLKAKSSFSC*HHTSGR
Trigger: TCTCCCTGATGTATGGTGGCAGCAAGAGAAAGAGCT...CTTAGCCTTCAATTGGGAGATACCTTTGGTCTGCTCCTGCACCAAAGCCATATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp TCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGAGGCTCCCAGGGATCAGGACACATAAGATACTGTaGAGACATCTGGAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: SPCGFSWLLKYVRLPGIRTHKIL*RHLEFR
Trigger: CCTGAACTCCAGATGTCTGCACAGTATCTTATGTGT...CCTGATCCCTGGGAGCCTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR CCA 90 bp GCAATAAATGAATACTTGATGCATTCATACAGGCAAGAATCCCAGCATCCCAGAGGTCCTCCTGCAGTCTaGACACTCTCCTCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: AINEYLMHSYRQESQHPRGPPAV*TLSSSP
Trigger: TGGACTGGAGGAGAGTGTCCAGACTGCAGGAGGACC...TCTGGGATGCTGGGATTCTTGCCTGTATGAATGCATCAAGTATTCATTTATTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp AAGCATACCAGAAGTCCCTATGGATTAGTTAAAGTAGTTCCATTCAGGGCACCCAGGTGTTGTCCTCACTaGTCAGGGACAGGTAAGAGG +
Preference number: 4 (lower is better)
Translates to: KHTRSPYGLVKVVPFRAPRCCPH*SGTGKR
Trigger: CCTCTTACCTGTCCCTGACCAGTGAGGACAACACCT...GGGTGCCCTGAATGGAACTACTTTAACTAATCCATAGGGACTTCTGGTATGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp AGTTCTAGTCTCGCCTCCTCGATTTCCCTGCCAGCAGTCTTCCTCTCTCTCATTCATTGTGTCTGTTCTTaGCTAGTCCTCAAAGTAAGG +
Preference number: 4 (lower is better)
Translates to: SSSLASSISLPAVFLSLIHCVCS*LVLKVR
Trigger: CCTTACTTTGAGGACTAGCCAAGAACAGACACAATG...AATGAGAGAGAGGAAGACTGCTGGCAGGGAAATCGAGGAGGCGAGACTAGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp CAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACTTCCATTGTGTCTGTTCTTaGCTAGTCCTCAAAGTAAGG +
Preference number: 4 (lower is better)
Translates to: QGSGNLAFRKIPGNSWNFHCVCS*LVLKVR
Trigger: CCTTACTTTGAGGACTAGCCAAGAACAGACACAATG...GAAGTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR CCA 90 bp AAGCATACCAGAAGTCCCTATGGATTAGTTAAAGTAGTTCCATTCAGGGCACCCAGACATCAGGGAAGCTaGTGCAGTTCTAGTCTCGCC +
Preference number: 4 (lower is better)
Translates to: KHTRSPYGLVKVVPFRAPRHQGS*CSSSLA
Trigger: GGCGAGACTAGAACTGCACCAGCTTCCCTGATGTCT...GGGTGCCCTGAATGGAACTACTTTAACTAATCCATAGGGACTTCTGGTATGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp TTTCCTCTCCCTCTCAGGCTTGCCCATACAGAAGTTCTCTCCAATGACCTTGGACTTCCTAGTAGGATTTaGATGGGAGCTTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: FPLPLRLAHTEVLSNDLGLPSRI*MGASPS
Trigger: AGAAGGAGAAGCTCCCATCCAAATCCTACTAGGAAG...TCCAAGGTCATTGGAGAGAACTTCTGTATGGGCAAGCCTGAGAGGGAGAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR TCA 90 bp AGAAGATGCGAATTTGAGTCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGGACGGAATGCTTATGTaGGCAGACAGACAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: RRCEFESPCGFSWLLKYVDGMLM*ADRQGE
Trigger: CTCTCCCTGTCTGTCTGCTCACATAAGCATTCCGTC...CACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGACTCAAATTCGCATCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR GCA 90 bp AGAAGATGCGAATTTGAGTCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGGTGGAGCATCAGGGCTaGCTGAGATGTTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: RRCEFESPCGFSWLLKYVVEHQG*LRCSPF
Trigger: GAATGGAGAACATCTCAGGCAGCCCTGATGCTCCAC...CACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGACTCAAATTCGCATCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000524345.5
CDS-3UTR GCA 90 bp AAGCATACCAGAAGTCCCTATGGATTAGTTAAAGTAGTTCCATTCAGGGCACCCCCGTCTGTCAACTGCTaGTGCTCCAGAATAAACAGG +
Preference number: 4 (lower is better)
Translates to: KHTRSPYGLVKVVPFRAPPSVNC*CSRINR
Trigger: CCTGTTTATTCTGGAGCAGCAGCAGTTGACAGACGG...GGGTGCCCTGAATGGAACTACTTTAACTAATCCATAGGGACTTCTGGTATGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR GCA 90 bp CTGGGCTCTTCCAAGCATCGCCCGACATGTCATGATCCAATGTTTCGTGATGCCCATACATCAGGGAGATaGTTTTCTTCTTTCGATCAA +
Preference number: 4 (lower is better)
Translates to: LGSSKHRPTCHDPMFRDAHTSGR*FSSFDQ
Trigger: TTGATCGAAAGAAGAAAAGCATCTCCCTGATGTATG...GGCATCACGAAACATTGGATCATGACATGTCGGGCGATGCTTGGAAGAGCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp CCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACTCATACATCAGGGAGATaGTTTTCTTCTTTCGATCAA +
Preference number: 4 (lower is better)
Translates to: PRDQGTSLFARSQAIVGTHTSGR*FSSFDQ
Trigger: TTGATCGAAAGAAGAAAAGCATCTCCCTGATGTATG...AGTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR GCA 90 bp TCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACCATACATCAGGGAGATaGTTTTCTTCTTTCGATCAA +
Preference number: 4 (lower is better)
Translates to: SQGSGNLAFRKIPGNSWNHTSGR*FSSFDQ
Trigger: TTGATCGAAAGAAGAAAAGCATCTCCCTGATGTATG...GTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR GCA 90 bp AAGCATACCAGAAGTCCCTATGGATTAGTTAAAGTAGTTCCATTCAGGGCACCCCCCATATGGCTTTGGTaGAGGAGCAGACCAAAGGTA +
Preference number: 4 (lower is better)
Translates to: KHTRSPYGLVKVVPFRAPPIWLW*RSRPKV
Trigger: TACCTTTGGTCTGCTCCTGCACCAAAGCCATATGGG...GGGTGCCCTGAATGGAACTACTTTAACTAATCCATAGGGACTTCTGGTATGCTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp TCTCTTAAAATTATGCATGACATCATTAATCCACTTGGACTCCCCATCTTTCCTAGGTCCTCCAGGCACTaGAAGGTGAGCCTCGGGGAA +
Preference number: 4 (lower is better)
Translates to: SLKIMHDIINPLGLPIFPRSSRH*KVSLGE
Trigger: TTCCCCGAGGCTCACCTTCCAGTGCCTGGAGGACCT...AGGAAAGATGGGGAGTCCAAGTGGATTAATGATGTCATGCATAATTTTAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR CCA 90 bp TCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGAGGCTCCCAGGGATCAGGCCTTTGGTCATGATGTaGATAGAGAAGATGCGAATT +
Preference number: 4 (lower is better)
Translates to: SPCGFSWLLKYVRLPGIRPLVMM*IEKMRI
Trigger: AATTCGCATCTTCTCTATCCACATCATGACCAAAGG...CCTGATCCCTGGGAGCCTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp TCCTTTGAAATAGCCTTTTGGAACGGTTGGGGAAACCACAGATGTCTCCTTGTATGGAGTGTAACTGTCTaGACAGGTCCAGTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SFEIAFWNGWGNHRCLLVWSVTV*TGPVPW
Trigger: CCAAGGAACTGGACCTGTCCAGACAGTTACACTCCA...TACAAGGAGACATCTGTGGTTTCCCCAACCGTTCCAAAAGGCTATTTCAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR CCA 90 bp AAGCATACCAGAAGTCCCTATGGATTAGTTAAAGTAGTTCCATTCAGGGCACCCTGGAGTGTAACTGTCTaGACAGGTCCAGTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: KHTRSPYGLVKVVPFRAPWSVTV*TGPVPW
Trigger: CCAAGGAACTGGACCTGTCCAGACAGTTACACTCCA...GGGTGCCCTGAATGGAACTACTTTAACTAATCCATAGGGACTTCTGGTATGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp AGAAGATGCGAATTTGAGTCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGAGACATCAGGGAAGCTaGTGCAGTTCTAGTCTCGCC +
Preference number: 4 (lower is better)
Translates to: RRCEFESPCGFSWLLKYVRHQGS*CSSSLA
Trigger: GGCGAGACTAGAACTGCACCAGCTTCCCTGATGTCT...CACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGACTCAAATTCGCATCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp AGTAGCACGATGAGCTCAGATGGACGGAATGCTTATGTGAGCAGACAGACAGGGGAGCTTCTCCTTCTCTaGCTATACATTGTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: SSTMSSDGRNAYVSRQTGELLLL*LYIVFS
Trigger: AGAAAACACAATGTATAGCCAGAGAAGGAGAAGCTC...CCCTGTCTGTCTGCTCACATAAGCATTCCGTCCATCTGAGCTCATCGTGCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR TCA 90 bp AAGCATACCAGAAGTCCCTATGGATTAGTTAAAGTAGTTCCATTCAGGGCACCCGTGTCTCACCGACAGTaGGTAAAACCCTTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: KHTRSPYGLVKVVPFRAPVSHRQ*VKPFLG
Trigger: ACCAAGAAAGGGTTTTACTCACTGTCGGTGAGACAC...GGGTGCCCTGAATGGAACTACTTTAACTAATCCATAGGGACTTCTGGTATGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR TCA 90 bp CATATGGCTTTGGTGCAGGAGCAGACCAAAGGTATCTCCCAATTGAAGGCTAAGTGTTCCTTTTGGGCATaGACCATTGTGTCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: HMALVQEQTKGISQLKAKCSFWA*TIVSVL
Trigger: AAGAACAGACACAATGGTTCATGCCCAAAAGGAACA...CTTAGCCTTCAATTGGGAGATACCTTTGGTCTGCTCCTGCACCAAAGCCATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp CATATGGCTTTGGTGCAGGAGCAGACCAAAGGTATCTCCCAATTGAAGGCTAAGCAGGGGTGGATTTCATaGTGTTTCCCATTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: HMALVQEQTKGISQLKAKQGWIS*CFPFLS
Trigger: AGAAAGAAATGGGAAACAGCATGAAATCCACCCCTG...CTTAGCCTTCAATTGGGAGATACCTTTGGTCTGCTCCTGCACCAAAGCCATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp AGAAGATGCGAATTTGAGTCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGTGGGCAGACGGAAAATaGGGTAATGCTTTACCTGCC +
Preference number: 4 (lower is better)
Translates to: RRCEFESPCGFSWLLKYVWADGK*GNALPA
Trigger: GGCAGGTAAAGCATTACCGCATTTTCCGTCTGCCCA...CACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGACTCAAATTCGCATCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000524345.5
CDS-3UTR GCA 90 bp AGAAGATGCGAATTTGAGTCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGACAGGTAAGAGGCAATaGTCTCTCGAAGGCCATAGC +
Preference number: 4 (lower is better)
Translates to: RRCEFESPCGFSWLLKYVTGKRQ*SLEGHS
Trigger: GCTATGGCCTTCGAGAGAGCATTGCCTCTTACCTGT...CACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGACTCAAATTCGCATCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000524345.5
CDS-3UTR GCA 90 bp CTGGGCTCTTCCAAGCATCGCCCGACATGTCATGATCCAATGTTTCGTGATGCCATCCAGGCATTCATTTaGATGATCAAAAGCAGATTT +
Preference number: 4 (lower is better)
Translates to: LGSSKHRPTCHDPMFRDAIQAFI*MIKSRF
Trigger: AAATCTGCTTTTGATCATGCAAATGAATGCCTGGAT...GGCATCACGAAACATTGGATCATGACATGTCGGGCGATGCTTGGAAGAGCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395352.7
CDS-3UTR CCA 90 bp AGAAGATGCGAATTTGAGTCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGGCCTTTTGGAACGGTTaGGGAAACCACAGATGTCTC +
Preference number: 4 (lower is better)
Translates to: RRCEFESPCGFSWLLKYVAFWNG*GNHRCL
Trigger: GAGACATCTGTGGTTTCCCCAACCGTTCCAAAAGGC...CACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGACTCAAATTCGCATCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR TCA 90 bp AGAAGATGCGAATTTGAGTCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGGAGAAGATGCGAATTTaGGTCTCCATGTGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: RRCEFESPCGFSWLLKYVEKMRI*VSMWLL
Trigger: GAGAAGCCACATGGAGACTCAAATTCGCATCTTCTC...CACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGACTCAAATTCGCATCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000524345.5
CDS-3UTR GCA 90 bp AGAAGATGCGAATTTGAGTCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGATGAGCTCTTTCTCTTaGTGCCACCATACATCAGGG +
Preference number: 4 (lower is better)
Translates to: RRCEFESPCGFSWLLKYVMSSFS*CHHTSG
Trigger: CCCTGATGTATGGTGGCAGCAAGAGAAAGAGCTCAT...CACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGACTCAAATTCGCATCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000524345.5
CDS-3UTR GCA 90 bp GCAATAAATGAATACTTGATGCATTCATACAGGCAAGAATCCCAGCATCCCAGATCTCCCTCTCAGGCTTaGCCATACAGAAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: AINEYLMHSYRQESQHPRSPSQA*PYRSSL
Trigger: GAGAGAACTTCTGTATGGGCAAGCCTGAGAGGGAGA...TCTGGGATGCTGGGATTCTTGCCTGTATGAATGCATCAAGTATTCATTTATTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp GCAATAAATGAATACTTGATGCATTCATACAGGCAAGAATCCCAGCATCCCAGACCCATATGGCTTTGGTaGAGGAGCAGACCAAAGGTA +
Preference number: 4 (lower is better)
Translates to: AINEYLMHSYRQESQHPRPIWLW*RSRPKV
Trigger: TACCTTTGGTCTGCTCCTGCACCAAAGCCATATGGG...TCTGGGATGCTGGGATTCTTGCCTGTATGAATGCATCAAGTATTCATTTATTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CCA 90 bp GCAATAAATGAATACTTGATGCATTCATACAGGCAAGAATCCCAGCATCCCAGACTGCAGTTGCTAAACTaGCCGCATACTTCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: AINEYLMHSYRQESQHPRLQLLN*PHTSSA
Trigger: AGCAGAGGAAGTATGCGGCCAGTTTAGCAACTGCAG...TCTGGGATGCTGGGATTCTTGCCTGTATGAATGCATCAAGTATTCATTTATTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR CCA 90 bp AGAAGATGCGAATTTGAGTCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGTGTAGTACCAGTTGTTaGGCAGACGGAAAATGCGGT +
Preference number: 4 (lower is better)
Translates to: RRCEFESPCGFSWLLKYVCSTSC*ADGKCG
Trigger: ACCGCATTTTCCGTCTGCCCAACAACTGGTACTACA...CACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGACTCAAATTCGCATCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000524345.5
CDS-3UTR CCA 90 bp TGTCCCTCACCTGTCTCTAATTCCATCCTAAGCCATGAGCTGATTTCTCTTTTTCACGATGAGCTCAGATaGACGGAATGCTTATGTGAG +
Preference number: 4 (lower is better)
Translates to: CPSPVSNSILSHELISLFHDELR*TECLCE
Trigger: CTCACATAAGCATTCCGTCCATCTGAGCTCATCGTG...AAAAAGAGAAATCAGCTCATGGCTTAGGATGGAATTAGAGACAGGTGAGGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR TCA 90 bp TCTCTTAAAATTATGCATGACATCATTAATCCACTTGGACTCCCCATCTTTCCTTGGAAAATGAGCTCCTaGGTGTCCCTCACCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SLKIMHDIINPLGLPIFPWKMSS*VSLTCL
Trigger: GAGACAGGTGAGGGACACTCAGGAGCTCATTTTCCA...AGGAAAGATGGGGAGTCCAAGTGGATTAATGATGTCATGCATAATTTTAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR GCA 90 bp GCAATAAATGAATACTTGATGCATTCATACAGGCAAGAATCCCAGCATCCCAGAAGCTCTTTCTCTTGCTaGCACCATACATCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: AINEYLMHSYRQESQHPRSSFSC*HHTSGR
Trigger: TCTCCCTGATGTATGGTGGCAGCAAGAGAAAGAGCT...TCTGGGATGCTGGGATTCTTGCCTGTATGAATGCATCAAGTATTCATTTATTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp TGTCCCTCACCTGTCTCTAATTCCATCCTAAGCCATGAGCTGATTTCTCTTTTTCAGGGGTGGATTTCATaGTGTTTCCCATTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: CPSPVSNSILSHELISLFQGWIS*CFPFLS
Trigger: AGAAAGAAATGGGAAACAGCATGAAATCCACCCCTG...AAAAAGAGAAATCAGCTCATGGCTTAGGATGGAATTAGAGACAGGTGAGGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR CCA 90 bp AGAAGATGCGAATTTGAGTCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGCATTGTGTCTGTTCTTaGCTAGTCCTCAAAGTAAGG +
Preference number: 4 (lower is better)
Translates to: RRCEFESPCGFSWLLKYVHCVCS*LVLKVR
Trigger: CCTTACTTTGAGGACTAGCCAAGAACAGACACAATG...CACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGACTCAAATTCGCATCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000524345.5
3UTR CAA 72 bp CTTAATGCAATGCCTATTCGGGCAATAAATGAATACTaGATGCATTCATACAGGCAAGAATCCCAGCATCCC +
Preference number: 4 (lower is better)
Translates to: LNAMPIRAINEY*MHSYRQESQHP
Trigger: GGGATGCTGGGATTCTTGCCTGTATGAATGCATCAAGTATTCATTTATTGCCCGAATAGGCATTGCATTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
3UTR CAA 72 bp GTCAATGTCCACAGTGTTACATTCATTTCTCATACGTaGGCTGGTTCCTTTGAAATAGCCTTTTGGAACGGT +
Preference number: 4 (lower is better)
Translates to: VNVHSVTFISHT*AGSFEIAFWNG
Trigger: ACCGTTCCAAAAGGCTATTTCAAAGGAACCAGCCAACGTATGAGAAATGAATGTAACACTGTGGACATTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR TCA 90 bp GCAATAAATGAATACTTGATGCATTCATACAGGCAAGAATCCCAGCATCCCAGATGTTCCTTTTGGGCATaGACCATTGTGTCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: AINEYLMHSYRQESQHPRCSFWA*TIVSVL
Trigger: AAGAACAGACACAATGGTTCATGCCCAAAAGGAACA...TCTGGGATGCTGGGATTCTTGCCTGTATGAATGCATCAAGTATTCATTTATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR GCA 90 bp TTGGAACGGTTGGGGAAACCACAGATGTCTCCTTGTATAAACACACTAGAATCTTTTTCCTCATATGGATaGCAGACCCTTCTTAGAATA +
Preference number: 4 (lower is better)
Translates to: LERLGKPQMSPCINTLESFSSYG*QTLLRI
Trigger: TATTCTAAGAAGGGTCTGGCATCCATATGAGGAAAA...AGATTCTAGTGTGTTTATACAAGGAGACATCTGTGGTTTCCCCAACCGTTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338087.10
3UTR CAA 72 bp TGTCTCTTAAAATTATGCATGACATCATTAATCCACTaGGACTCCCCATCTTTCCTGGAGCTGAGCATTTTT +
Preference number: 4 (lower is better)
Translates to: CLLKLCMTSLIH*DSPSFLELSIF
Trigger: AAAAATGCTCAGCTCCAGGAAAGATGGGGAGTCCAAGTGGATTAATGATGTCATGCATAATTTTAAGAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS GCA 90 bp GCAGACAGGGCAGCCATCTGCGCCAGTGAACTCCGCCCAGGGCGGTaGTGCAGGGGCTGCTGGGAACCATGTGTGGTCACCCCCTCCGGG +
Preference number: 5 (lower is better)
Translates to: ADRAAICASELRPGR*CRGCWEPCVVTPSG
Trigger: CCCGGAGGGGGTGACCACACATGGTTCCCAGCAGCCCCTGCAGCACCGCCCTGGGCGGAGTTCACTGGCGCAGATGGCTGCCCTGTCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522432.5
CDS TCA 90 bp CACTTCCCTGTCAGGCTCGGCAGACAGGGCAGCCATCTGCGCCAGTaGACTCCGCCCAGGGCGGTGCTGCAGGGGCTGCTGGGAACCATG +
Preference number: 5 (lower is better)
Translates to: HFPVRLGRQGSHLRQ*TPPRAVLQGLLGTM
Trigger: CATGGTTCCCAGCAGCCCCTGCAGCACCGCCCTGGGCGGAGTTCACTGGCGCAGATGGCTGCCCTGTCTGCCGAGCCTGACAGGGAAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522432.5
CDS CCA 90 bp CAGAAACAGAGCGCCTCCGCTGTGCCCCTAAGCTTGGCCAGGAGTTaGCCTCGTCTGGGAGCAGGTGGAGTGGGGGCCCTGTGGGTAGCA +
Preference number: 5 (lower is better)
Translates to: QKQSASAVPLSLARS*PRLGAGGVGALWVA
Trigger: TGCTACCCACAGGGCCCCCACTCCACCTGCTCCCAGACGAGGCCAACTCCTGGCCAAGCTTAGGGGCACAGCGGAGGCGCTCTGTTTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395352.7
CDS TCA 90 bp CCCTCACTGCTGGGGCAGCCGTGCTTTGTGTCAGGCAGGGCGTGGTaGGCACACAGCACAGGCCATCAGCCACCTCTGAGGAGGGAAGCA +
Preference number: 5 (lower is better)
Translates to: PSLLGQPCFVSGRAW*AHSTGHQPPLRREA
Trigger: TGCTTCCCTCCTCAGAGGTGGCTGATGGCCTGTGCTGTGTGCTCACCACGCCCTGCCTGACACAAAGCACGGCTGCCCCAGCAGTGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517549.1
CDS-3UTR CAA 90 bp TGTCAGGAGACGGGTAGTCACTTAGCACGGCAAGGAAGTCGCTATCCAGTCCTGGTCACCCCCTCCGGGTaGGGCAGGGGCCTCTCGGCA +
Preference number: 5 (lower is better)
Translates to: CQETGSHLARQGSRYPVLVTPSG*GRGLSA
Trigger: TGCCGAGAGGCCCCTGCCCAACCCGGAGGGGGTGAC...CAGGACTGGATAGCGACTTCCTTGCCGTGCTAAGTGACTACCCGTCTCCTGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522432.5
CDS TCA 90 bp GGGTCCTCCTGCAGTCTGGACACTCTCCTCCAGTCCACAGTCTTCTaGCGCAAGGTGACAGGTGAGCTGGAGGCCCTCACTGCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: GSSCSLDTLLQSTVF*RKVTGELEALTAGA
Trigger: TGCCCCAGCAGTGAGGGCCTCCAGCTCACCTGTCACCTTGCGTCAGAAGACTGTGGACTGGAGGAGAGTGTCCAGACTGCAGGAGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517549.1
ENST00000517648.5
ENST00000524345.5
CDS TCA 90 bp CCCTCACTGCTGGGGCAGCCGTGCTTTGTGTCAGGCAGGGCGTGGTaGGCACACAGCACAGGCCATCAGCCACCTCTTTCTTGGTCTCAC +
Preference number: 5 (lower is better)
Translates to: PSLLGQPCFVSGRAW*AHSTGHQPPLSWSH
Trigger: GTGAGACCAAGAAAGAGGTGGCTGATGGCCTGTGCTGTGTGCTCACCACGCCCTGCCTGACACAAAGCACGGCTGCCCCAGCAGTGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517648.5
CDS-3UTR CAA 90 bp ACATCTGGAGTTCAGGGGGTCACCCTGCCTTATGCGGGAAGTCAATGTCCACAGTCCAGTCCCTCCGGGTaGGGCAGGGGCCTCTCGGCA +
Preference number: 5 (lower is better)
Translates to: TSGVQGVTLPYAGSQCPQSSPSG*GRGLSA
Trigger: TGCCGAGAGGCCCCTGCCCAACCCGGAGGGACTGGA...CTGTGGACATTGACTTCCCGCATAAGGCAGGGTGACCCCCTGAACTCCAGATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS TCA 90 bp CCCTCACTGCTGGGGCAGCCGTGCTTTGTGTCAGGCAGGGCGTGGTaGGCACACAGCACAGGCCATCAGCCACCTCAGAATAGTGGTTCA +
Preference number: 5 (lower is better)
Translates to: PSLLGQPCFVSGRAW*AHSTGHQPPQNSGS
Trigger: TGAACCACTATTCTGAGGTGGCTGATGGCCTGTGCTGTGTGCTCACCACGCCCTGCCTGACACAAAGCACGGCTGCCCCAGCAGTGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000524345.5
CDS GCA 90 bp GCCCAGAGCCTTCACACACTGGGCATGACTCCTGTGGGAGCTGTCTaGAGAGGGATTGCTGGGTGCAGAGTCACTGCCTCTCCGTCTGTC +
Preference number: 5 (lower is better)
Translates to: AQSLHTLGMTPVGAV*RGIAGCRVTASPSV
Trigger: GACAGACGGAGAGGCAGTGACTCTGCACCCAGCAATCCCTCTGCAGACAGCTCCCACAGGAGTCATGCCCAGTGTGTGAAGGCTCTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338087.10
ENST00000518594.1
ENST00000519341.5
ENST00000519747.5
ENST00000520106.5
ENST00000522002.5
ENST00000522432.5
ENST00000523610.5
CDS GCA 90 bp CGACCTTTGTGTCTGGCAGCTGCAGCAGCTCCTCGGCCTTGTCTCTaGCCAGGCCCTCAAACAGCCAGCCATGGTAAACTCTGGCCACAC +
Preference number: 5 (lower is better)
Translates to: RPLCLAAAAAPRPCL*PGPQTASHGKLWPH
Trigger: GTGTGGCCAGAGTTTACCATGGCTGGCTGTTTGAGGGCCTGGGCAGAGACAAGGCCGAGGAGCTGCTGCAGCTGCCAGACACAAAGGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000521823.5
ENST00000522119.5
ENST00000523224.5
ENST00000524345.5
CDS GCA 90 bp GTGTCCGGGCTTCACACACTGGGCATGACTCCTGTGGGAGCTGTCTaGAGAGGGATTGCTGGGTGCAGAGTCACTGCCTCTCCGTCTGTC +
Preference number: 5 (lower is better)
Translates to: VSGLHTLGMTPVGAV*RGIAGCRVTASPSV
Trigger: GACAGACGGAGAGGCAGTGACTCTGCACCCAGCAATCCCTCTGCAGACAGCTCCCACAGGAGTCATGCCCAGTGTGTGAAGCCCGGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519558.5
ENST00000522946.5
CDS GCA 90 bp CCCAGAGCTGGGCATGACTCCTGTGGGAGCTGTCTGCAGAGGGATTaGTGGGTGCAGAGTCACTGCCTCTCCGTCTGTCAACTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PRAGHDSCGSCLQRD*WVQSHCLSVCQLLL
Trigger: CAGCAGCAGTTGACAGACGGAGAGGCAGTGACTCTGCACCCAGCAATCCCTCTGCAGACAGCTCCCACAGGAGTCATGCCCAGCTCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523224.5
CDS-3UTR CAA 90 bp CATCCCAGAGAAGCTCTGTCTGCGCTGCAAAGCCATGGCTGCAGACATCAGGGACCGGGCTTCTCGCGGTaGTGGAGAAGCAGCCCATGC +
Preference number: 5 (lower is better)
Translates to: HPREALSALQSHGCRHQGPGFSR*WRSSPC
Trigger: GCATGGGCTGCTTCTCCACAACCGCGAGAAGCCCGG...TCCCTGATGTCTGCAGCCATGGCTTTGCAGCGCAGACAGAGCTTCTCTGGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR CAA 90 bp AGCTTTCCACCAGCCCCCTTCATCAGAAATCACACGCAGTTTCTCCCCTCGGCGCCGGGCTTCTCGCGGTaGTGGAGAAGCAGCCCATGC +
Preference number: 5 (lower is better)
Translates to: SFPPAPFIRNHTQFLPSAPGFSR*WRSSPC
Trigger: GCATGGGCTGCTTCTCCACAACCGCGAGAAGCCCGG...CGCCGAGGGGAGAAACTGCGTGTGATTTCTGATGAAGGGGGCTGGTGGAAAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522432.5
CDS-3UTR CAA 90 bp CATCCCAGAGAAGCTCTGTCTGCGCTGCAAAGCCATGGCTGCAGACATCAGGGAAGCAGCTCCTCGGCCTaGTCTCTGCCCAGGCCCTCA +
Preference number: 5 (lower is better)
Translates to: HPREALSALQSHGCRHQGSSSSA*SLPRPS
Trigger: TGAGGGCCTGGGCAGAGACAAGGCCGAGGAGCTGCT...TCCCTGATGTCTGCAGCCATGGCTTTGCAGCGCAGACAGAGCTTCTCTGGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS GCA 90 bp GGGATTGCTGGGTGCAGAGTCACTGCCTCTCCGTCTGTCAACTGCTaGTGCTCCAGAATAAACAGGCAGCCGGGCTTCTCGCGGTTGTGG +
Preference number: 5 (lower is better)
Translates to: GIAGCRVTASPSVNC*CSRINRQPGFSRLW
Trigger: CCACAACCGCGAGAAGCCCGGCTGCCTGTTTATTCTGGAGCAGCAGCAGTTGACAGACGGAGAGGCAGTGACTCTGCACCCAGCAATCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000338087.10
ENST00000517615.1
ENST00000517932.1
ENST00000518594.1
ENST00000519341.5
ENST00000519558.5
ENST00000519747.5
ENST00000520106.5
ENST00000521302.5
ENST00000521823.5
ENST00000522432.5
ENST00000522946.5
ENST00000523610.5
CDS GCA 90 bp CTGGGCATGACTCCTGTGGGAGCTGTCTGCAGAGGGATTGCTGGGTaGAGAGTCACTGCCTCTCCGTCTGTCAACTGCTGCTGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: LGMTPVGAVCRGIAG*RVTASPSVNCCCSR
Trigger: TCTGGAGCAGCAGCAGTTGACAGACGGAGAGGCAGTGACTCTGCACCCAGCAATCCCTCTGCAGACAGCTCCCACAGGAGTCATGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000338087.10
ENST00000517615.1
ENST00000518594.1
ENST00000519341.5
ENST00000519558.5
ENST00000519747.5
ENST00000520106.5
ENST00000521302.5
ENST00000521823.5
ENST00000522002.5
ENST00000522432.5
ENST00000522946.5
ENST00000523224.5
ENST00000523610.5
CDS CCA 90 bp CACACTGGGCATGACTCCTGTGGGAGCTGTCTGCAGAGGGATTGCTaGGTGCAGAGTCACTGCCTCTCCGTCTGTCAACTGCTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: HTGHDSCGSCLQRDC*VQSHCLSVCQLLLL
Trigger: GAGCAGCAGCAGTTGACAGACGGAGAGGCAGTGACTCTGCACCCAGCAATCCCTCTGCAGACAGCTCCCACAGGAGTCATGCCCAGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000338087.10
ENST00000517615.1
ENST00000518594.1
ENST00000519341.5
ENST00000519558.5
ENST00000519747.5
ENST00000520106.5
ENST00000521302.5
ENST00000521823.5
ENST00000522002.5
ENST00000522432.5
ENST00000522946.5
ENST00000523610.5
CDS CCA 90 bp AGAGCTGGGCATGACTCCTGTGGGAGCTGTCTGCAGAGGGATTGCTaGGTGCAGAGTCACTGCCTCTCCGTCTGTCAACTGCTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: RAGHDSCGSCLQRDC*VQSHCLSVCQLLLL
Trigger: GAGCAGCAGCAGTTGACAGACGGAGAGGCAGTGACTCTGCACCCAGCAATCCCTCTGCAGACAGCTCCCACAGGAGTCATGCCCAGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523224.5
CDS-3UTR CAA 90 bp ATGTTTCGTGATGCCACAGCCCTGATCAGACACCAGGGAGGGGTTCCTTTGGTCAGCAGCTCCTCGGCCTaGTCTCTGCCCAGGCCCTCA +
Preference number: 5 (lower is better)
Translates to: MFRDATALIRHQGGVPLVSSSSA*SLPRPS
Trigger: TGAGGGCCTGGGCAGAGACAAGGCCGAGGAGCTGCT...GACCAAAGGAACCCCTCCCTGGTGTCTGATCAGGGCTGTGGCATCACGAAACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CAA 90 bp GGCTCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAAGCTTGGCCAGGAGTaGGCCTCGTCTGGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: GSQGSGNLAFRKIPGNSWKLGQE*ASSGSR
Trigger: CCTGCTCCCAGACGAGGCCAACTCCTGGCCAAGCTT...CCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395352.7
CDS-3UTR CAA 90 bp CATCCCAGAGAAGCTCTGTCTGCGCTGCAAAGCCATGGCTGCAGACATCAGGGAGCTGTGCCCCTAAGCTaGGCCAGGAGTTGGCCTCGT +
Preference number: 5 (lower is better)
Translates to: HPREALSALQSHGCRHQGAVPLS*ARSWPR
Trigger: ACGAGGCCAACTCCTGGCCAAGCTTAGGGGCACAGC...TCCCTGATGTCTGCAGCCATGGCTTTGCAGCGCAGACAGAGCTTCTCTGGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395352.7
CDS TCA 90 bp TTGTTCTCAGTTGCTGGAAAAATTTCCAGCAGGAGTCATCAGGCCTaGTGTTGGCCAGGCCCGTGGCAGTGCCCAGCCGGCTCCCCACTG +
Preference number: 5 (lower is better)
Translates to: LFSVAGKISSRSHQA*CWPGPWQCPAGSPL
Trigger: CAGTGGGGAGCCGGCTGGGCACTGCCACGGGCCTGGCCAACATCAGGCCTGATGACTCCTGCTGGAAATTTTTCCAGCAACTGAGAACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523224.5
CDS GCA 90 bp AGAGGGATTGCTGGGTGCAGAGTCACTGCCTCTCCGTCTGTCAACTaGTGCTGCTCCAGAATAAACAGGCAGCCGGGCTTCTCGCGGTTG +
Preference number: 5 (lower is better)
Translates to: RGIAGCRVTASPSVN*CCSRINRQPGFSRL
Trigger: CAACCGCGAGAAGCCCGGCTGCCTGTTTATTCTGGAGCAGCAGCAGTTGACAGACGGAGAGGCAGTGACTCTGCACCCAGCAATCCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000338087.10
ENST00000517615.1
ENST00000517932.1
ENST00000518594.1
ENST00000519341.5
ENST00000519558.5
ENST00000519747.5
ENST00000520106.5
ENST00000521302.5
ENST00000521823.5
ENST00000522432.5
ENST00000522946.5
ENST00000523610.5
CDS GCA 90 bp TCACACACTGGGCATGACTCCTGTGGGAGCTGTCTGCAGAGGGATTaGTGGGTGCAGAGTCACTGCCTCTCCGTCTGTCAACTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: SHTGHDSCGSCLQRD*WVQSHCLSVCQLLL
Trigger: CAGCAGCAGTTGACAGACGGAGAGGCAGTGACTCTGCACCCAGCAATCCCTCTGCAGACAGCTCCCACAGGAGTCATGCCCAGTGTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000338087.10
ENST00000517615.1
ENST00000518594.1
ENST00000519341.5
ENST00000519558.5
ENST00000519747.5
ENST00000520106.5
ENST00000521302.5
ENST00000521823.5
ENST00000522002.5
ENST00000522432.5
ENST00000522946.5
ENST00000523610.5
CDS-3UTR CAA 90 bp CCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACTAGCAGCTCCTCGGCCTaGTCTCTGCCCAGGCCCTCA +
Preference number: 5 (lower is better)
Translates to: PRDQGTSLFARSQAIVGTSSSSA*SLPRPS
Trigger: TGAGGGCCTGGGCAGAGACAAGGCCGAGGAGCTGCT...AGTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR CAA 90 bp CGTGATGCCACAGCCCTGATCAGACACCAGGGAGGGGTTCCTTTGGTCATGATGGACAGGTCCAGTTCCTaGGAGAGCAGTCCTGGTGCC +
Preference number: 5 (lower is better)
Translates to: RDATALIRHQGGVPLVMMDRSSS*ESSPGA
Trigger: GGCACCAGGACTGCTCTCCAAGGAACTGGACCTGTC...CATCATGACCAAAGGAACCCCTCCCTGGTGTCTGATCAGGGCTGTGGCATCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS GCA 90 bp ATTGCTGGGTGCAGAGTCACTGCCTCTCCGTCTGTCAACTGCTGCTaGTCCAGAATAAACAGGCAGCCGGGCTTCTCGCGGTTGTGGAGA +
Preference number: 5 (lower is better)
Translates to: IAGCRVTASPSVNCC*SRINRQPGFSRLWR
Trigger: TCTCCACAACCGCGAGAAGCCCGGCTGCCTGTTTATTCTGGAGCAGCAGCAGTTGACAGACGGAGAGGCAGTGACTCTGCACCCAGCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000338087.10
ENST00000517615.1
ENST00000517932.1
ENST00000518594.1
ENST00000519341.5
ENST00000519558.5
ENST00000519747.5
ENST00000520106.5
ENST00000521302.5
ENST00000521823.5
ENST00000522432.5
ENST00000522946.5
ENST00000523610.5
CDS GCA 90 bp AGATTTGTGCCCAGGTGTTCAGGGCTCCAAAGCCACCCAGGAGGCTaGAGAGGCCTCACTGGAACGACCATGGTAAACTCTGGCCACACA +
Preference number: 5 (lower is better)
Translates to: RFVPRCSGLQSHPGG*RGLTGTTMVNSGHT
Trigger: TGTGTGGCCAGAGTTTACCATGGTCGTTCCAGTGAGGCCTCTGCAGCCTCCTGGGTGGCTTTGGAGCCCTGAACACCTGGGCACAAATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518565.5
ENST00000522002.5
CDS GCA 90 bp TATCCAGTCCTTCACACACTGGGCATGACTCCTGTGGGAGCTGTCTaGAGAGGGATTGCTGGGTGCAGAGTCACTGCCTCTCCGTCTGTC +
Preference number: 5 (lower is better)
Translates to: YPVLHTLGMTPVGAV*RGIAGCRVTASPSV
Trigger: GACAGACGGAGAGGCAGTGACTCTGCACCCAGCAATCCCTCTGCAGACAGCTCCCACAGGAGTCATGCCCAGTGTGTGAAGGACTGGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521823.5
CDS-3UTR CAA 90 bp TCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGAGGCTCCCAGGGATCAGGAGCAGCTCCTCGGCCTaGTCTCTGCCCAGGCCCTCA +
Preference number: 5 (lower is better)
Translates to: SPCGFSWLLKYVRLPGIRSSSSA*SLPRPS
Trigger: TGAGGGCCTGGGCAGAGACAAGGCCGAGGAGCTGCT...CCTGATCCCTGGGAGCCTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000524345.5
CDS-3UTR CAA 90 bp GCTCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAGACAGGTCCAGTTCCTaGGAGAGCAGTCCTGGTGCC +
Preference number: 5 (lower is better)
Translates to: APRDQGTSLFARSQAIVGDRSSS*ESSPGA
Trigger: GGCACCAGGACTGCTCTCCAAGGAACTGGACCTGTC...TCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS GCA 90 bp TCCTGTGGGAGCTGTCTGCAGAGGGATTGCTGGGTGCAGAGTCACTaGCTCTCCGTCTGTCAACTGCTGCTGCTCCAGAATAAACAGGCA +
Preference number: 5 (lower is better)
Translates to: SCGSCLQRDCWVQSH*LSVCQLLLLQNKQA
Trigger: TGCCTGTTTATTCTGGAGCAGCAGCAGTTGACAGACGGAGAGGCAGTGACTCTGCACCCAGCAATCCCTCTGCAGACAGCTCCCACAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000338087.10
ENST00000517615.1
ENST00000518594.1
ENST00000519341.5
ENST00000519558.5
ENST00000519747.5
ENST00000520106.5
ENST00000521302.5
ENST00000521823.5
ENST00000522432.5
ENST00000522946.5
ENST00000523610.5
CDS GCA 90 bp TTTCCTGTTCTTCACACACTGGGCATGACTCCTGTGGGAGCTGTCTaGAGAGGGATTGCTGGGTGCAGAGTCACTGCCTCTCCGTCTGTC +
Preference number: 5 (lower is better)
Translates to: FPVLHTLGMTPVGAV*RGIAGCRVTASPSV
Trigger: GACAGACGGAGAGGCAGTGACTCTGCACCCAGCAATCCCTCTGCAGACAGCTCCCACAGGAGTCATGCCCAGTGTGTGAAGAACAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521302.5
CDS GCA 90 bp ATTGTAGATCTTCACACACTGGGCATGACTCCTGTGGGAGCTGTCTaGAGAGGGATTGCTGGGTGCAGAGTCACTGCCTCTCCGTCTGTC +
Preference number: 5 (lower is better)
Translates to: IVDLHTLGMTPVGAV*RGIAGCRVTASPSV
Trigger: GACAGACGGAGAGGCAGTGACTCTGCACCCAGCAATCCCTCTGCAGACAGCTCCCACAGGAGTCATGCCCAGTGTGTGAAGATCTACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517615.1
CDS CCA 90 bp CACCAGCAGAGACCCACCCATTTTCTTCAGACCAAAGACGGAGGGTaGGTACAGGATCCATCAAGTCCCTCTGAAGACCCTCCCCCACAT +
Preference number: 5 (lower is better)
Translates to: HQQRPTHFLQTKDGG*VQDPSSPSEDPPPH
Trigger: ATGTGGGGGAGGGTCTTCAGAGGGACTTGATGGATCCTGTACCCACCCTCCGTCTTTGGTCTGAAGAAAATGGGTGGGTCTCTGCTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522946.5
ENST00000523610.5
CDS-3UTR CAA 90 bp ATAGCTTTCCACCAGCCCCCTTCATCAGAAATCACACGCAGTTTCTCCCCTCGGCTGTCTGCAGAGGGATaGCTGGGTGCAGAGTCACTG +
Preference number: 5 (lower is better)
Translates to: IAFHQPPSSEITRSFSPRLSAEG*LGAESL
Trigger: CAGTGACTCTGCACCCAGCAATCCCTCTGCAGACAG...CCGAGGGGAGAAACTGCGTGTGATTTCTGATGAAGGGGGCTGGTGGAAAGCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522432.5
CDS TCA 90 bp CCACCTCAGAATAGTGGTTCACCAGGTCCTCCAGGCACTGGAAGGTaGGCCTCGGGGAAATGTAGTACCAGTTGTTGGGCAGACGGAAAA +
Preference number: 5 (lower is better)
Translates to: PPQNSGSPGPPGTGR*ASGKCSTSCWADGK
Trigger: TTTTCCGTCTGCCCAACAACTGGTACTACATTTCCCCGAGGCTCACCTTCCAGTGCCTGGAGGACCTGGTGAACCACTATTCTGAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000524345.5
CDS GCA 90 bp AGAGGCCTGGGTTCTTCTACGCTAACAGTCTTCTCTGCTGTTGCTTaGACTCCCACCCGTTCTGTCTTGCCAGTCAGAGTTCAGTCTCCG +
Preference number: 5 (lower is better)
Translates to: RGLGSSTLTVFSAVA*TPTRSVLPVRVQSP
Trigger: CGGAGACTGAACTCTGACTGGCAAGACAGAACGGGTGGGAGTGCAAGCAACAGCAGAGAAGACTGTTAGCGTAGAAGAACCCAGGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519558.5
CDS CCA 90 bp TGCTGCTGCTCCAGAATAAACAGGCAGCCGGGCTTCTCGCGGTTGTaGAGAAGCAGCCCATGCTACACAGAAGAACTGCAGTTGCTAAAC +
Preference number: 5 (lower is better)
Translates to: CCCSRINRQPGFSRL*RSSPCYTEELQLLN
Trigger: GTTTAGCAACTGCAGTTCTTCTGTGTAGCATGGGCTGCTTCTCCACAACCGCGAGAAGCCCGGCTGCCTGTTTATTCTGGAGCAGCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000338087.10
ENST00000517615.1
ENST00000517932.1
ENST00000519341.5
ENST00000519558.5
ENST00000519747.5
ENST00000520106.5
ENST00000521302.5
ENST00000521823.5
ENST00000522432.5
ENST00000522946.5
ENST00000523610.5
CDS-3UTR CAA 90 bp GGTGCCCTTTCTTGTGAGAGTGGCTTTGTCCTTCCCACACACACAATGTGTGCACTGTCTGCAGAGGGATaGCTGGGTGCAGAGTCACTG +
Preference number: 5 (lower is better)
Translates to: GALSCESGFVLPTHTMCALSAEG*LGAESL
Trigger: CAGTGACTCTGCACCCAGCAATCCCTCTGCAGACAG...TGCACACATTGTGTGTGTGGGAAGGACAAAGCCACTCTCACAAGAAAGGGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR CAA 90 bp TCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACCGATCAAAGGAGGTGTaGTCCTCACTGGTCAGGGAC +
Preference number: 5 (lower is better)
Translates to: SQGSGNLAFRKIPGNSWNRSKEV*SSLVRD
Trigger: GTCCCTGACCAGTGAGGACAACACCTCCTTTGATCG...GTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR CAA 90 bp CCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACTCGATCAAAGGAGGTGTaGTCCTCACTGGTCAGGGAC +
Preference number: 5 (lower is better)
Translates to: PRDQGTSLFARSQAIVGTRSKEV*SSLVRD
Trigger: GTCCCTGACCAGTGAGGACAACACCTCCTTTGATCG...AGTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR CAA 90 bp AGTGTAACTGTCTGGACAGGTCCAGTTCCTTGGAGAGCAGTCCTGGTGCCCTTTGCCAGGACACAGCTTTaGTTTCCTCTCCCTCTCAGG +
Preference number: 5 (lower is better)
Translates to: SVTVWTGPVPWRAVLVPFARTQL*FPLPLR
Trigger: CCTGAGAGGGAGAGGAAACAAAAGCTGTGTCCTGGC...AAAGGGCACCAGGACTGCTCTCCAAGGAACTGGACCTGTCCAGACAGTTACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CAA 90 bp ACATCTGGAGTTCAGGGGGTCACCCTGCCTTATGCGGGAAGTCAATGTCCACAGTCCACCCATATGGCTTaGGTGCAGGAGCAGACCAAA +
Preference number: 5 (lower is better)
Translates to: TSGVQGVTLPYAGSQCPQSTHMA*VQEQTK
Trigger: TTTGGTCTGCTCCTGCACCAAAGCCATATGGGTGGA...CTGTGGACATTGACTTCCCGCATAAGGCAGGGTGACCCCCTGAACTCCAGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR CAA 90 bp GCAGACATCAGGGAAGCTGGTGCAGTTCTAGTCTCGCCTCCTCGATTTCCCTGCAGCCTTTTGGAACGGTaGGGGAAACCACAGATGTCT +
Preference number: 5 (lower is better)
Translates to: ADIREAGAVLVSPPRFPCSLLER*GKPQMS
Trigger: AGACATCTGTGGTTTCCCCAACCGTTCCAAAAGGCT...GCAGGGAAATCGAGGAGGCGAGACTAGAACTGCACCAGCTTCCCTGATGTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS TCA 90 bp CAGACGGGGAAAGTCAACCGTGCCCTGAGCCCTCCAAGTGGAGAATaGCCCAGTTTAGAGAGCATCGTGCATCATTTTTCTGGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: QTGKVNRALSPPSGE*PSLESIVHHFSGSL
Trigger: CAAGCTGCCAGAAAAATGATGCACGATGCTCTCTAAACTGGGTCATTCTCCACTTGGAGGGCTCAGGGCACGGTTGACTTTCCCCGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427060.6
CDS CCA 90 bp TGGAGAAGCAGCCCATGCTACACAGAAGAACTGCAGTTGCTAAACTaGCCGCATACTTCCTCTGCTAGGAACGAGGAAGGCACAGGGCTT +
Preference number: 5 (lower is better)
Translates to: WRSSPCYTEELQLLN*PHTSSARNEEGTGL
Trigger: AAGCCCTGTGCCTTCCTCGTTCCTAGCAGAGGAAGTATGCGGCCAGTTTAGCAACTGCAGTTCTTCTGTGTAGCATGGGCTGCTTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000338087.10
ENST00000517615.1
ENST00000517932.1
ENST00000519341.5
ENST00000519558.5
ENST00000519747.5
ENST00000521302.5
ENST00000521823.5
ENST00000522946.5
ENST00000523610.5
CDS-3UTR CAA 90 bp CAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACTTCCGATCAAAGGAGGTGTaGTCCTCACTGGTCAGGGAC +
Preference number: 5 (lower is better)
Translates to: QGSGNLAFRKIPGNSWNFRSKEV*SSLVRD
Trigger: GTCCCTGACCAGTGAGGACAACACCTCCTTTGATCG...GAAGTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR CAA 90 bp GGCTCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAATGAGCTCTTTCTCTaGCTGCCACCATACATCAGG +
Preference number: 5 (lower is better)
Translates to: GSQGSGNLAFRKIPGNSWNELFL*LPPYIR
Trigger: CCTGATGTATGGTGGCAGCAAGAGAAAGAGCTCATT...CCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000524345.5
CDS-3UTR CAA 90 bp TCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACCTCTCCCTCTCAGGCTaGCCCATACAGAAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: SQGSGNLAFRKIPGNSWNLSLSG*PIQKFS
Trigger: AGAGAACTTCTGTATGGGCAAGCCTGAGAGGGAGAG...GTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CAA 90 bp CATCCCAGAGAAGCTCTGTCTGCGCTGCAAAGCCATGGCTGCAGACATCAGGGACCATTGTGTCTGTTCTaGGCTAGTCCTCAAAGTAAG +
Preference number: 5 (lower is better)
Translates to: HPREALSALQSHGCRHQGPLCLF*ASPQSK
Trigger: CTTACTTTGAGGACTAGCCAAGAACAGACACAATGG...TCCCTGATGTCTGCAGCCATGGCTTTGCAGCGCAGACAGAGCTTCTCTGGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CAA 90 bp GGCTCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGTTTGGGCATGAACCATaGTGTCTGTTCTTGGCTAGT +
Preference number: 5 (lower is better)
Translates to: GSQGSGNLAFRKIPGNSWFGHEP*CLFLAS
Trigger: ACTAGCCAAGAACAGACACAATGGTTCATGCCCAAA...CCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000524345.5
CDS-3UTR CAA 90 bp GGCTCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGTCCATGTGGCTTCTCTaGGCTTCTAAAATACGTGAG +
Preference number: 5 (lower is better)
Translates to: GSQGSGNLAFRKIPGNSWSMWLL*ASKIRE
Trigger: CTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGA...CCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000524345.5
CDS-3UTR CAA 90 bp GGCTCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAGAGAAGATGCGAATTaGAGTCTCCATGTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: GSQGSGNLAFRKIPGNSWREDAN*SLHVAS
Trigger: AGAAGCCACATGGAGACTCAAATTCGCATCTTCTCT...CCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000524345.5
CDS-3UTR CAA 90 bp GCTCTTCCAAGCATCGCCCGACATGTCATGATCCAATGTTTCGTGATGCCACAGCAGGGAGGGGTTCCTTaGGTCATGATGTGGATAGAG +
Preference number: 5 (lower is better)
Translates to: ALPSIARHVMIQCFVMPQQGGVP*VMMWIE
Trigger: CTCTATCCACATCATGACCAAAGGAACCCCTCCCTG...CTGTGGCATCACGAAACATTGGATCATGACATGTCGGGCGATGCTTGGAAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CAA 90 bp TTTGAGTCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGAGGCTCCCAGGGGCCAGGACACAGCTTTaGTTTCCTCTCCCTCTCAGG +
Preference number: 5 (lower is better)
Translates to: FESPCGFSWLLKYVRLPGARTQL*FPLPLR
Trigger: CCTGAGAGGGAGAGGAAACAAAAGCTGTGTCCTGGC...CCCTGGGAGCCTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGACTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CAA 90 bp GACATCTGGAGTTCAGGGGGTCACCCTGCCTTATGCGGGAAGTCAATGTCCACATTCCCCAGGATCCCTTaGAAACAGGGAAACATGAGT +
Preference number: 5 (lower is better)
Translates to: DIWSSGGHPALCGKSMSTFPRIP*KQGNMS
Trigger: ACTCATGTTTCCCTGTTTCAAAGGGATCCTGGGGAA...TGTGGACATTGACTTCCCGCATAAGGCAGGGTGACCCCCTGAACTCCAGATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS GCA 90 bp CACAGCCCAGGCCCATACCAAAGGCCACATTCTATCTGCACAGCATaGTGCCTACACACTGCGTTCAGTTTTGTTCTCAGTTGCTGGAAA +
Preference number: 5 (lower is better)
Translates to: HSPGPYQRPHSICTA*CLHTAFSFVLSCWK
Trigger: TTTCCAGCAACTGAGAACAAAACTGAACGCAGTGTGTAGGCAGCATGCTGTGCAGATAGAATGTGGCCTTTGGTATGGGCCTGGGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523224.5
CDS CCA 90 bp GGGAGATGCTTTTCTTCTTTCGATCAAAGGAGGTGTTGTCCTCACTaGTCAGGGACAGGTAAGAGGCAATGCTCTCTCGAAGGCCATAGC +
Preference number: 5 (lower is better)
Translates to: GRCFSSFDQRRCCPH*SGTGKRQCSLEGHS
Trigger: GCTATGGCCTTCGAGAGAGCATTGCCTCTTACCTGTCCCTGACCAGTGAGGACAACACCTCCTTTGATCGAAAGAAGAAAAGCATCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517549.1
ENST00000517648.5
ENST00000524345.5
CDS-3UTR CAA 90 bp ACATACATGCTGGGCTCTTCCAAGCATCGCCCGACATGTCATGATCCAATGTTTCGATCAAAGGAGGTGTaGTCCTCACTGGTCAGGGAC +
Preference number: 5 (lower is better)
Translates to: TYMLGSSKHRPTCHDPMFRSKEV*SSLVRD
Trigger: GTCCCTGACCAGTGAGGACAACACCTCCTTTGATCG...AAACATTGGATCATGACATGTCGGGCGATGCTTGGAAGAGCCCAGCATGTATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CAA 90 bp CATATGGCTTTGGTGCAGGAGCAGACCAAAGGTATCTCCCAATTGAAGGCTAAGCGATCAAAGGAGGTGTaGTCCTCACTGGTCAGGGAC +
Preference number: 5 (lower is better)
Translates to: HMALVQEQTKGISQLKAKRSKEV*SSLVRD
Trigger: GTCCCTGACCAGTGAGGACAACACCTCCTTTGATCG...CTTAGCCTTCAATTGGGAGATACCTTTGGTCTGCTCCTGCACCAAAGCCATATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CAA 90 bp CCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACTAATGAGCTCTTTCTCTaGCTGCCACCATACATCAGG +
Preference number: 5 (lower is better)
Translates to: PRDQGTSLFARSQAIVGTNELFL*LPPYIR
Trigger: CCTGATGTATGGTGGCAGCAAGAGAAAGAGCTCATT...AGTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR CAA 90 bp GTGCAGACATCTGGAGTTCAGGGGGTCACCCTGCCTTATGCGGGAAGTCAATGTCCATTGTGTCTGTTCTaGGCTAGTCCTCAAAGTAAG +
Preference number: 5 (lower is better)
Translates to: VQTSGVQGVTLPYAGSQCPLCLF*ASPQSK
Trigger: CTTACTTTGAGGACTAGCCAAGAACAGACACAATGG...ACATTGACTTCCCGCATAAGGCAGGGTGACCCCCTGAACTCCAGATGTCTGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR CAA 90 bp GCTCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGACCATTGTGTCTGTTCTaGGCTAGTCCTCAAAGTAAG +
Preference number: 5 (lower is better)
Translates to: APRDQGTSLFARSQAIVGPLCLF*ASPQSK
Trigger: CTTACTTTGAGGACTAGCCAAGAACAGACACAATGG...TCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR CAA 90 bp GCTCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGATCCATGTGGCTTCTCTaGGCTTCTAAAATACGTGAG +
Preference number: 5 (lower is better)
Translates to: APRDQGTSLFARSQAIVGSMWLL*ASKIRE
Trigger: CTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGA...TCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000524345.5
CDS-3UTR CAA 90 bp GACATCTGGAGTTCAGGGGGTCACCCTGCCTTATGCGGGAAGTCAATGTCCACAAGAGAAGATGCGAATTaGAGTCTCCATGTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: DIWSSGGHPALCGKSMSTREDAN*SLHVAS
Trigger: AGAAGCCACATGGAGACTCAAATTCGCATCTTCTCT...TGTGGACATTGACTTCCCGCATAAGGCAGGGTGACCCCCTGAACTCCAGATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR CAA 90 bp TGGAGTTCAGGGGGTCACCCTGCCTTATGCGGGAAGTCAATGTCCACAGTGTTATTCTCTCCAATGACCTaGGAGTGTAACTGTCTGGAC +
Preference number: 5 (lower is better)
Translates to: WSSGGHPALCGKSMSTVLFSPMT*ECNCLD
Trigger: GTCCAGACAGTTACACTCCAAGGTCATTGGAGAGAA...TAACACTGTGGACATTGACTTCCCGCATAAGGCAGGGTGACCCCCTGAACTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR CAA 90 bp ACATACATGCTGGGCTCTTCCAAGCATCGCCCGACATGTCATGATCCAATGTTTGCCAGGACACAGCTTTaGTTTCCTCTCCCTCTCAGG +
Preference number: 5 (lower is better)
Translates to: TYMLGSSKHRPTCHDPMFARTQL*FPLPLR
Trigger: CCTGAGAGGGAGAGGAAACAAAAGCTGTGTCCTGGC...AAACATTGGATCATGACATGTCGGGCGATGCTTGGAAGAGCCCAGCATGTATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CAA 90 bp CTGGGCTCTTCCAAGCATCGCCCGACATGTCATGATCCAATGTTTCGTGATGCCCTGGCAGCTTGCTTCTaGAAAGGCGGCTGTTTATAT +
Preference number: 5 (lower is better)
Translates to: LGSSKHRPTCHDPMFRDALAACF*KGGCLY
Trigger: ATATAAACAGCCGCCTTTCAAGAAGCAAGCTGCCAG...GGCATCACGAAACATTGGATCATGACATGTCGGGCGATGCTTGGAAGAGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427060.6
CDS GCA 90 bp TGTGCTGTGCCCTCCCATAACATTTCCCAGCTGTTTACCACTCTGTaGCAGGAGCACCATGTTAGAGCTGAAAGGTCCAACTTCCTTCAT +
Preference number: 5 (lower is better)
Translates to: CAVPSHNISQLFTTL*QEHHVRAERSNFLH
Trigger: ATGAAGGAAGTTGGACCTTTCAGCTCTAACATGGTGCTCCTGGCACAGAGTGGTAAACAGCTGGGAAATGTTATGGGAGGGCACAGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520106.5
CDS GCA 90 bp GATTTGAACCTAGACACACTGACTTCTAGTCTCTGCACTGTGCTGTaGCCTCCCATAACATTTCCCAGCTGTTTACCACTCTGTGCCAGG +
Preference number: 5 (lower is better)
Translates to: DLNLDTLTSSLCTVL*PPITFPSCLPLCAR
Trigger: CCTGGCACAGAGTGGTAAACAGCTGGGAAATGTTATGGGAGGGCACAGCACAGTGCAGAGACTAGAAGTCAGTGTGTCTAGGTTCAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520106.5
CDS GCA 90 bp TGCACAGCATGCTGCCTACACACTGCGTTCAGTTTTGTTCTCAGTTaGTGGAAAAATTTCCAGCAGGAGTCATCAGGCCTGATGTTGGCC +
Preference number: 5 (lower is better)
Translates to: CTACCLHTAFSFVLS*WKNFQQESSGLMLA
Trigger: GGCCAACATCAGGCCTGATGACTCCTGCTGGAAATTTTTCCAGCAACTGAGAACAAAACTGAACGCAGTGTGTAGGCAGCATGCTGTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523224.5
CDS CCA 90 bp ACAGCATGCTGCCTACACACTGCGTTCAGTTTTGTTCTCAGTTGCTaGAAAAATTTCCAGCAGGAGTCATCAGGCCTGATGTTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: TACCLHTAFSFVLSC*KNFQQESSGLMLAR
Trigger: CCTGGCCAACATCAGGCCTGATGACTCCTGCTGGAAATTTTTCCAGCAACTGAGAACAAAACTGAACGCAGTGTGTAGGCAGCATGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523224.5
CDS-3UTR CAA 90 bp TCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGAGGCTCCCAGGGATCAGGAATGAGCTCTTTCTCTaGCTGCCACCATACATCAGG +
Preference number: 5 (lower is better)
Translates to: SPCGFSWLLKYVRLPGIRNELFL*LPPYIR
Trigger: CCTGATGTATGGTGGCAGCAAGAGAAAGAGCTCATT...CCTGATCCCTGGGAGCCTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000524345.5
CDS-3UTR CAA 90 bp TCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACCCATTGTGTCTGTTCTaGGCTAGTCCTCAAAGTAAG +
Preference number: 5 (lower is better)
Translates to: SQGSGNLAFRKIPGNSWNPLCLF*ASPQSK
Trigger: CTTACTTTGAGGACTAGCCAAGAACAGACACAATGG...GTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR CAA 90 bp TCCCAGGGATCAGGGAACCTCGCTTTTCGCAAGATCCCAGGCAATAGTTGGAACTTTGGGCATGAACCATaGTGTCTGTTCTTGGCTAGT +
Preference number: 5 (lower is better)
Translates to: SQGSGNLAFRKIPGNSWNFGHEP*CLFLAS
Trigger: ACTAGCCAAGAACAGACACAATGGTTCATGCCCAAA...GTTCCAACTATTGCCTGGGATCTTGCGAAAAGCGAGGTTCCCTGATCCCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000524345.5
CDS-3UTR CAA 90 bp CTGGGCTCTTCCAAGCATCGCCCGACATGTCATGATCCAATGTTTCGTGATGCCTCCATGTGGCTTCTCTaGGCTTCTAAAATACGTGAG +
Preference number: 5 (lower is better)
Translates to: LGSSKHRPTCHDPMFRDASMWLL*ASKIRE
Trigger: CTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGA...GGCATCACGAAACATTGGATCATGACATGTCGGGCGATGCTTGGAAGAGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CAA 90 bp GGTGCCCTTTCTTGTGAGAGTGGCTTTGTCCTTCCCACACACACAATGTGTGCATTCTCTCCAATGACCTaGGAGTGTAACTGTCTGGAC +
Preference number: 5 (lower is better)
Translates to: GALSCESGFVLPTHTMCAFSPMT*ECNCLD
Trigger: GTCCAGACAGTTACACTCCAAGGTCATTGGAGAGAA...TGCACACATTGTGTGTGTGGGAAGGACAAAGCCACTCTCACAAGAAAGGGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CAA 90 bp ATGGCTTTGGTGCAGGAGCAGACCAAAGGTATCTCCCAATTGAAGGCTAAGAAGTCCACCCATATGGCTTaGGTGCAGGAGCAGACCAAA +
Preference number: 5 (lower is better)
Translates to: MALVQEQTKGISQLKAKKSTHMA*VQEQTK
Trigger: TTTGGTCTGCTCCTGCACCAAAGCCATATGGGTGGA...CTTCTTAGCCTTCAATTGGGAGATACCTTTGGTCTGCTCCTGCACCAAAGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS TCA 90 bp GAGAGCAGAAGAGATAAGTTAGCCCAAGGTTGCTCCTTTCCTTATTaGCTGGGTTGGGAGCAGGACTATCTCTTCTTGACCCAGTGCCTT +
Preference number: 5 (lower is better)
Translates to: ESRRDKLAQGCSFPY*LGWEQDYLFLTQCL
Trigger: AAGGCACTGGGTCAAGAAGAGATAGTCCTGCTCCCAACCCAGTCAATAAGGAAAGGAGCAACCTTGGGCTAACTTATCTCTTCTGCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520106.5
CDS GCA 90 bp CAGCAGCGTGTGGGCTGCAGGGAGCTTAACTACATTGGATCAATTTaGATGGACGTAGGAGGAAGGAAAATGAAGCCGTGTAATGAGTCA +
Preference number: 5 (lower is better)
Translates to: QQRVGCRELNYIGSI*MDVGGRKMKPCNES
Trigger: TGACTCATTACACGGCTTCATTTTCCTTCCTCCTACGTCCATGCAAATTGATCCAATGTAGTTAAGCTCCCTGCAGCCCACACGCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523224.5
CDS GCA 90 bp AGCCCAGGCCCATACCAAAGGCCACATTCTATCTGCACAGCATGCTaGCTACACACTGCGTTCAGTTTTGTTCTCAGTTGCTGGAAAAAT +
Preference number: 5 (lower is better)
Translates to: SPGPYQRPHSICTAC*LHTAFSFVLSCWKN
Trigger: ATTTTTCCAGCAACTGAGAACAAAACTGAACGCAGTGTGTAGGCAGCATGCTGTGCAGATAGAATGTGGCCTTTGGTATGGGCCTGGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523224.5
CDS-3UTR CAA 90 bp TCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGAGGCTCCCAGGGATCAGGTTTGGGCATGAACCATaGTGTCTGTTCTTGGCTAGT +
Preference number: 5 (lower is better)
Translates to: SPCGFSWLLKYVRLPGIRFGHEP*CLFLAS
Trigger: ACTAGCCAAGAACAGACACAATGGTTCATGCCCAAA...CCTGATCCCTGGGAGCCTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000524345.5
CDS-3UTR CAA 90 bp GCTCTTCCAAGCATCGCCCGACATGTCATGATCCAATGTTTCGTGATGCCACAGAGAGAAGATGCGAATTaGAGTCTCCATGTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: ALPSIARHVMIQCFVMPQREDAN*SLHVAS
Trigger: AGAAGCCACATGGAGACTCAAATTCGCATCTTCTCT...CTGTGGCATCACGAAACATTGGATCATGACATGTCGGGCGATGCTTGGAAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CAA 90 bp GGATTTGGATGGGAGCTTCTCCTTCTCTGGCTATACATTGTGTTTTCTCCCTTGCAGGGAGGGGTTCCTTaGGTCATGATGTGGATAGAG +
Preference number: 5 (lower is better)
Translates to: GFGWELLLLWLYIVFSPLQGGVP*VMMWIE
Trigger: CTCTATCCACATCATGACCAAAGGAACCCCTCCCTG...CAAGGGAGAAAACACAATGTATAGCCAGAGAAGGAGAAGCTCCCATCCAAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS TCA 90 bp GGAGCAGGACTATCTCTTCTTGACCCAGTGCCTTCCTTACCACTATaGATGCTGGAATCTTTGTTCCACCTTATGAGTCACCAGCATACG +
Preference number: 5 (lower is better)
Translates to: GAGLSLLDPVPSLPL*MLESLFHLMSHQHT
Trigger: CGTATGCTGGTGACTCATAAGGTGGAACAAAGATTCCAGCATTCATAGTGGTAAGGAAGGCACTGGGTCAAGAAGAGATAGTCCTGCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520106.5
CDS-3UTR CAA 90 bp CATATGGCTTTGGTGCAGGAGCAGACCAAAGGTATCTCCCAATTGAAGGCTAAGAATGAGCTCTTTCTCTaGCTGCCACCATACATCAGG +
Preference number: 5 (lower is better)
Translates to: HMALVQEQTKGISQLKAKNELFL*LPPYIR
Trigger: CCTGATGTATGGTGGCAGCAAGAGAAAGAGCTCATT...CTTAGCCTTCAATTGGGAGATACCTTTGGTCTGCTCCTGCACCAAAGCCATATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CAA 90 bp AAGCATACCAGAAGTCCCTATGGATTAGTTAAAGTAGTTCCATTCAGGGCACCCTCCACCCATATGGCTTaGGTGCAGGAGCAGACCAAA +
Preference number: 5 (lower is better)
Translates to: KHTRSPYGLVKVVPFRAPSTHMA*VQEQTK
Trigger: TTTGGTCTGCTCCTGCACCAAAGCCATATGGGTGGA...GGGTGCCCTGAATGGAACTACTTTAACTAATCCATAGGGACTTCTGGTATGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS TCA 90 bp ACTTGTACAGAGTCACAGAGTTCTTTGGTGGCCGACCCAGAATGTTaGCACAGGTGCAGCTATTACGGCACAATCTTTCTATGTTGCCAT +
Preference number: 5 (lower is better)
Translates to: TCTESQSSLVADPEC*HRCSYYGTIFLCCH
Trigger: ATGGCAACATAGAAAGATTGTGCCGTAATAGCTGCACCTGTGTCAACATTCTGGGTCGGCCACCAAAGAACTCTGTGACTCTGTACAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517615.1
CDS TCA 90 bp AGCTTCTCTCTGCAAGGACTTGAATTGTTAGAAGGCTCTGTGGATTaGTCAAGTCAGACTATTCAAATAAACCCAGTGGGGCCAGGCAGC +
Preference number: 5 (lower is better)
Translates to: SFSLQGLELLEGSVD*SSQTIQINPVGPGS
Trigger: GCTGCCTGGCCCCACTGGGTTTATTTGAATAGTCTGACTTGATCAATCCACAGAGCCTTCTAACAATTCAAGTCCTTGCAGAGAGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517932.1
ENST00000519341.5
CDS TCA 90 bp GCTCCTTTCCTTATTGACTGGGTTGGGAGCAGGACTATCTCTTCTTaGCCCAGTGCCTTCCTTACCACTATGAATGCTGGAATCTTTGTT +
Preference number: 5 (lower is better)
Translates to: APFLIDWVGSRTISS*PSAFLTTMNAGIFV
Trigger: AACAAAGATTCCAGCATTCATAGTGGTAAGGAAGGCACTGGGTCAAGAAGAGATAGTCCTGCTCCCAACCCAGTCAATAAGGAAAGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520106.5
CDS GCA 90 bp CAGGTGCAGCTATTACGGCACAATCTTTCTATGTTGCCATCTTGCTaGTCTGATCTAGATTGTAGATCTTCACACACTGGGCATGACTCC +
Preference number: 5 (lower is better)
Translates to: QVQLLRHNLSMLPSC*SDLDCRSSHTGHDS
Trigger: GGAGTCATGCCCAGTGTGTGAAGATCTACAATCTAGATCAGAGCAGCAAGATGGCAACATAGAAAGATTGTGCCGTAATAGCTGCACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517615.1
CDS-3UTR CAA 90 bp ACATACATGCTGGGCTCTTCCAAGCATCGCCCGACATGTCATGATCCAATGTTTAGAGAAGATGCGAATTaGAGTCTCCATGTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: TYMLGSSKHRPTCHDPMFREDAN*SLHVAS
Trigger: AGAAGCCACATGGAGACTCAAATTCGCATCTTCTCT...AAACATTGGATCATGACATGTCGGGCGATGCTTGGAAGAGCCCAGCATGTATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CAA 90 bp TCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGAGGCTCCCAGGGATCAGGAAAGGTATCTCCCAATaGAAGGCTAAGAAGTCCTTT +
Preference number: 5 (lower is better)
Translates to: SPCGFSWLLKYVRLPGIRKGISQ*KAKKSF
Trigger: AAAGGACTTCTTAGCCTTCAATTGGGAGATACCTTT...CCTGATCCCTGGGAGCCTCACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CAA 90 bp GCTCTTCCAAGCATCGCCCGACATGTCATGATCCAATGTTTCGTGATGCCACAGACCACAGATGTCTCCTaGTATAAACACACTAGAATC +
Preference number: 5 (lower is better)
Translates to: ALPSIARHVMIQCFVMPQTTDVS*YKHTRI
Trigger: GATTCTAGTGTGTTTATACAAGGAGACATCTGTGGT...CTGTGGCATCACGAAACATTGGATCATGACATGTCGGGCGATGCTTGGAAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR CAA 90 bp AGTGTAACTGTCTGGACAGGTCCAGTTCCTTGGAGAGCAGTCCTGGTGCCCTTTTATCCAGGCATTCATTaGCATGATCAAAAGCAGATT +
Preference number: 5 (lower is better)
Translates to: SVTVWTGPVPWRAVLVPFYPGIH*HDQKQI
Trigger: AATCTGCTTTTGATCATGCAAATGAATGCCTGGATA...AAAGGGCACCAGGACTGCTCTCCAAGGAACTGGACCTGTCCAGACAGTTACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395352.7
CDS TCA 90 bp AACCAAGTTTATCCTGCTTTGAAGATTGCACAAGTTTTGGAGAGCTaGCTCACTCAGAAATCACACGCAGTTTCTCCCCTCGGCGGAATA +
Preference number: 5 (lower is better)
Translates to: NQVYPALKIAQVLES*LTQKSHAVSPLGGI
Trigger: TATTCCGCCGAGGGGAGAAACTGCGTGTGATTTCTGAGTGAGTCAGCTCTCCAAAACTTGTGCAATCTTCAAAGCAGGATAAACTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518594.1
ENST00000519504.5
CDS TCA 90 bp TCGGGACTGTCTGTGCAGCAAGAGCAACACAAATACTATGACATTTaGATCTCACCACACCCTTACAAGGGAGAGGTGTTCTCTCCATTT +
Preference number: 5 (lower is better)
Translates to: SGLSVQQEQHKYYDI*ISPHPYKGEVFSPF
Trigger: AAATGGAGAGAACACCTCTCCCTTGTAAGGGTGTGGTGAGATTCAAATGTCATAGTATTTGTGTTGCTCTTGCTGCACAGACAGTCCCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523224.5
CDS TCA 90 bp ACTGATATCGGGACTGTCTGTGCAGCAAGAGCAACACAAATACTATaGCATTTGAATCTCACCACACCCTTACAAGGGAGAGGTGTTCTC +
Preference number: 5 (lower is better)
Translates to: TDIGTVCAARATQIL*HLNLTTPLQGRGVL
Trigger: GAGAACACCTCTCCCTTGTAAGGGTGTGGTGAGATTCAAATGTCATAGTATTTGTGTTGCTCTTGCTGCACAGACAGTCCCGATATCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523224.5
CDS TCA 90 bp CCTTATTTTCCCTCCGGTCTTTGGACCAATGTTATTTCCTTTGTGTaGACTTGGACCTTGGTTTCCTGTTCTTCACACACTGGGCATGAC +
Preference number: 5 (lower is better)
Translates to: PYFPSGLWTNVISFV*TWTLVSCSSHTGHD
Trigger: GTCATGCCCAGTGTGTGAAGAACAGGAAACCAAGGTCCAAGTTCACACAAAGGAAATAACATTGGTCCAAAGACCGGAGGGAAAATAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521302.5
CDS GCA 90 bp AGAAGAATGAGCTCTTTCTCTTGCTGCCACCATACATCAGGGAGATaGTTTTCTTCTTTCGATCAAAGGAGGTGTTGTCCTCACTGGTCA +
Preference number: 5 (lower is better)
Translates to: RRMSSFSCCHHTSGR*FSSFDQRRCCPHWS
Trigger: TGACCAGTGAGGACAACACCTCCTTTGATCGAAAGAAGAAAAGCATCTCCCTGATGTATGGTGGCAGCAAGAGAAAGAGCTCATTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517549.1
ENST00000517648.5
ENST00000524345.5
CDS GCA 90 bp ATACCAAAGGCCACATTCTATCTGCACAGCATGCTGCCTACACACTaGGTTCAGTTTTGTTCTCAGTTGCTGGAAAAATTTCCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: IPKATFYLHSMLPTH*VQFCSQLLEKFPAG
Trigger: TCCTGCTGGAAATTTTTCCAGCAACTGAGAACAAAACTGAACGCAGTGTGTAGGCAGCATGCTGTGCAGATAGAATGTGGCCTTTGGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523224.5
CDS-3UTR CAA 90 bp GCAATAAATGAATACTTGATGCATTCATACAGGCAAGAATCCCAGCATCCCAGACAGGGAGGGGTTCCTTaGGTCATGATGTGGATAGAG +
Preference number: 5 (lower is better)
Translates to: AINEYLMHSYRQESQHPRQGGVP*VMMWIE
Trigger: CTCTATCCACATCATGACCAAAGGAACCCCTCCCTG...TCTGGGATGCTGGGATTCTTGCCTGTATGAATGCATCAAGTATTCATTTATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
CDS-3UTR CAA 90 bp ACATACATGCTGGGCTCTTCCAAGCATCGCCCGACATGTCATGATCCAATGTTTTTCTCTGGCTATACATaGTGTTTTCTCCCTTGTCTC +
Preference number: 5 (lower is better)
Translates to: TYMLGSSKHRPTCHDPMFFSGYT*CFLPCL
Trigger: GAGACAAGGGAGAAAACACAATGTATAGCCAGAGAA...AAACATTGGATCATGACATGTCGGGCGATGCTTGGAAGAGCCCAGCATGTATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS-3UTR CAA 90 bp AGAAGATGCGAATTTGAGTCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGCATTTTTCTGGCAGCTaGCTTCTTGAAAGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: RRCEFESPCGFSWLLKYVHFSGS*LLERRL
Trigger: CAGCCGCCTTTCAAGAAGCAAGCTGCCAGAAAAATG...CACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGACTCAAATTCGCATCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427060.6
CDS TCA 90 bp CCTTATGAGTCACCAGCATACGCATCATGCTTAATTGCTGCCATTTaGGAAATGTACTCACCCATGGTAAACTCTGGCCACACATATTCC +
Preference number: 5 (lower is better)
Translates to: PYESPAYASCLIAAI*EMYSPMVNSGHTYS
Trigger: GGAATATGTGTGGCCAGAGTTTACCATGGGTGAGTACATTTCTCAAATGGCAGCAATTAAGCATGATGCGTATGCTGGTGACTCATAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520106.5
CDS TCA 90 bp AATTGTAATGCTAGTGATGATGGTGACTGTGTGAGAGGACACATGTaGTTCTCGGAGCTGTCTGATTTAGTTACGGAGCACAGAGGAAAC +
Preference number: 5 (lower is better)
Translates to: NCNASDDGDCVRGHM*FSELSDLVTEHRGN
Trigger: GTTTCCTCTGTGCTCCGTAACTAAATCAGACAGCTCCGAGAATCACATGTGTCCTCTCACACAGTCACCATCATCACTAGCATTACAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523224.5
CDS-3UTR CAA 90 bp AGAAGATGCGAATTTGAGTCTCCATGTGGCTTCTCTTGGCTTCTAAAATACGTGCCATTGTGTCTGTTCTaGGCTAGTCCTCAAAGTAAG +
Preference number: 5 (lower is better)
Translates to: RRCEFESPCGFSWLLKYVPLCLF*ASPQSK
Trigger: CTTACTTTGAGGACTAGCCAAGAACAGACACAATGG...CACGTATTTTAGAAGCCAAGAGAAGCCACATGGAGACTCAAATTCGCATCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000524345.5
CDS TCA 90 bp GGTGAAATTGACAGTCTGCCTACATTATCCAGGCATTCATTTGCATaGTCAAAAGCAGATTTGTTCCAAGATGCAATGTTCTGCCTTCCC +
Preference number: 5 (lower is better)
Translates to: GEIDSLPTLSRHSFA*SKADLFQDAMFCLP
Trigger: GGGAAGGCAGAACATTGCATCTTGGAACAAATCTGCTTTTGATCATGCAAATGAATGCCTGGATAATGTAGGCAGACTGTCAATTTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395352.7
ENST00000518565.5
CDS TCA 90 bp GGCTGCCTGAGATGTTCTCCATTCGCAGCAAATGATCTTATTTTCTaGAGTAGCAGCTTTCTATTGAAATTCTTCATCAGTCGCTGTCAT +
Preference number: 5 (lower is better)
Translates to: GCLRCSPFAANDLIF*SSSFLLKFFISRCH
Trigger: ATGACAGCGACTGATGAAGAATTTCAATAGAAAGCTGCTACTTCAGAAAATAAGATCATTTGCTGCGAATGGAGAACATCTCAGGCAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395352.7
ENST00000518565.5
ENST00000519341.5
CDS-3UTR CAA 90 bp GCAATAAATGAATACTTGATGCATTCATACAGGCAAGAATCCCAGCATCCCAGATTCATTTCTCATACGTaGGCTGGTTCCTTTGAAATA +
Preference number: 5 (lower is better)
Translates to: AINEYLMHSYRQESQHPRFISHT*AGSFEI
Trigger: TATTTCAAAGGAACCAGCCAACGTATGAGAAATGAA...TCTGGGATGCTGGGATTCTTGCCTGTATGAATGCATCAAGTATTCATTTATTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338087.10
CDS TCA 90 bp CATCCTAAGCATGGAAGTGGCATCTGGTATTCACAATTAAGATCATaGATACTAAAATTAAACTCGCAGAATTCCAGTCTTCAAAGGATT +
Preference number: 5 (lower is better)
Translates to: HPKHGSGIWYSQLRS*ILKLNSQNSSLQRI
Trigger: AATCCTTTGAAGACTGGAATTCTGCGAGTTTAATTTTAGTATTCATGATCTTAATTGTGAATACCAGATGCCACTTCCATGCTTAGGATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518565.5
ENST00000522002.5
CDS TCA 72 bp GTCAGGCTCGGCAGACAGGGCAGCCATCTGCGCCAGTaGACTCCGCCCAGGGCGGTGCTGCAGGGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: VRLGRQGSHLRQ*TPPRAVLQGLL
Trigger: CAGCAGCCCCTGCAGCACCGCCCTGGGCGGAGTTCACTGGCGCAGATGGCTGCCCTGTCTGCCGAGCCTGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522432.5
CDS GCA 72 bp GCCATCTGCGCCAGTGAACTCCGCCCAGGGCGGTGCTaGAGGGGCTGCTGGGAACCATGTGTGGTCACCCCC +
Preference number: 6 (lower is better)
Translates to: AICASELRPGRC*RGCWEPCVVTP
Trigger: GGGGGTGACCACACATGGTTCCCAGCAGCCCCTGCAGCACCGCCCTGGGCGGAGTTCACTGGCGCAGATGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522432.5
CDS CCA 72 bp AGCCGGTCAGGGACCCTGGGGACGCCTCAGCCAGTGTaGGGTTCAGGCCTGAGACACTCTCCAGTGCAGCTC +
Preference number: 6 (lower is better)
Translates to: SRSGTLGTPQPV*GSGLRHSPVQL
Trigger: GAGCTGCACTGGAGAGTGTCTCAGGCCTGAACCCCACACTGGCTGAGGCGTCCCCAGGGTCCCTGACCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517549.1
CDS CAA 72 bp TGGAAAAATTTCCAGCAGGAGTCATCAGGCCTGATGTaGGCCAGGCCCGTGGCAGTGCCCAGCCGGCTCCCC +
Preference number: 6 (lower is better)
Translates to: WKNFQQESSGLM*ARPVAVPSRLP
Trigger: GGGGAGCCGGCTGGGCACTGCCACGGGCCTGGCCAACATCAGGCCTGATGACTCCTGCTGGAAATTTTTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523224.5
CDS CCA 72 bp AAGTCGCTATCCAGTCCTGGAGGCAGCGCAGGAACCTaGCTCAGTCCACTTCCCTGTCAGGCTCGGCAGACA +
Preference number: 6 (lower is better)
Translates to: KSLSSPGGSAGT*LSPLPCQARQT
Trigger: TGTCTGCCGAGCCTGACAGGGAAGTGGACTGAGCCAGGTTCCTGCGCTGCCTCCAGGACTGGATAGCGACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522432.5
CDS GCA 72 bp TGCAGAGTCACTGCCTCTCCGTCTGTCAACTGCTGCTaGTCCAGAATAAACAGGCAGCCGGGCTTCTCGCGG +
Preference number: 6 (lower is better)
Translates to: CRVTASPSVNCC*SRINRQPGFSR
Trigger: CCGCGAGAAGCCCGGCTGCCTGTTTATTCTGGAGCAGCAGCAGTTGACAGACGGAGAGGCAGTGACTCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000338087.10
ENST00000517615.1
ENST00000517932.1
ENST00000518594.1
ENST00000519341.5
ENST00000519558.5
ENST00000519747.5
ENST00000520106.5
ENST00000521302.5
ENST00000521823.5
ENST00000522432.5
ENST00000522946.5
ENST00000523610.5
CDS GCA 72 bp GGGTGCAGAGTCACTGCCTCTCCGTCTGTCAACTGCTaGTGCTCCAGAATAAACAGGCAGCCGGGCTTCTCG +
Preference number: 6 (lower is better)
Translates to: GCRVTASPSVNC*CSRINRQPGFS
Trigger: CGAGAAGCCCGGCTGCCTGTTTATTCTGGAGCAGCAGCAGTTGACAGACGGAGAGGCAGTGACTCTGCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000338087.10
ENST00000517615.1
ENST00000517932.1
ENST00000518594.1
ENST00000519341.5
ENST00000519558.5
ENST00000519747.5
ENST00000520106.5
ENST00000521302.5
ENST00000521823.5
ENST00000522432.5
ENST00000522946.5
ENST00000523610.5
CDS GCA 72 bp GCTGGGTGCAGAGTCACTGCCTCTCCGTCTGTCAACTaGTGCTGCTCCAGAATAAACAGGCAGCCGGGCTTC +
Preference number: 6 (lower is better)
Translates to: AGCRVTASPSVN*CCSRINRQPGF
Trigger: GAAGCCCGGCTGCCTGTTTATTCTGGAGCAGCAGCAGTTGACAGACGGAGAGGCAGTGACTCTGCACCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000338087.10
ENST00000517615.1
ENST00000517932.1
ENST00000518594.1
ENST00000519341.5
ENST00000519558.5
ENST00000519747.5
ENST00000520106.5
ENST00000521302.5
ENST00000521823.5
ENST00000522432.5
ENST00000522946.5
ENST00000523610.5
CDS TCA 72 bp TGCAGTCTGGACACTCTCCTCCAGTCCACAGTCTTCTaGCGCAAGGTGACAGGTGAGCTGGAGGCCCTCACT +
Preference number: 6 (lower is better)
Translates to: CSLDTLLQSTVF*RKVTGELEALT
Trigger: AGTGAGGGCCTCCAGCTCACCTGTCACCTTGCGTCAGAAGACTGTGGACTGGAGGAGAGTGTCCAGACTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517549.1
ENST00000517648.5
ENST00000524345.5
CDS GCA 72 bp CAGCCGGGCTTCTCGCGGTTGTGGAGAAGCAGCCCATaGTACACAGAAGAACTGCAGTTGCTAAACTGGCCG +
Preference number: 6 (lower is better)
Translates to: QPGFSRLWRSSP*YTEELQLLNWP
Trigger: CGGCCAGTTTAGCAACTGCAGTTCTTCTGTGTAGCATGGGCTGCTTCTCCACAACCGCGAGAAGCCCGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338087.10
ENST00000517615.1
ENST00000517932.1
ENST00000519341.5
ENST00000519558.5
ENST00000519747.5
ENST00000521302.5
ENST00000521823.5
ENST00000522432.5
ENST00000522946.5
ENST00000523610.5
CDS GCA 72 bp CTTCACACACTGGGCATGACTCCTGTGGGAGCTGTCTaGAGAGGGATTGCTGGGTGCAGAGTCACTGCCTCT +
Preference number: 6 (lower is better)
Translates to: LHTLGMTPVGAV*RGIAGCRVTAS
Trigger: AGAGGCAGTGACTCTGCACCCAGCAATCCCTCTGCAGACAGCTCCCACAGGAGTCATGCCCAGTGTGTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000338087.10
ENST00000517615.1
ENST00000518594.1
ENST00000519341.5
ENST00000519558.5
ENST00000519747.5
ENST00000520106.5
ENST00000521302.5
ENST00000521823.5
ENST00000522002.5
ENST00000522432.5
ENST00000522946.5
ENST00000523610.5
CDS TCA 72 bp GAGGTACCCTGGGACTGGATGCCTGTGAATGTCACGTaGCCTCCTCCAGTCCTGCTGATTACTGGACAGAGC +
Preference number: 6 (lower is better)
Translates to: EVPWDWMPVNVT*PPPVLLITGQS
Trigger: GCTCTGTCCAGTAATCAGCAGGACTGGAGGAGGTCACGTGACATTCACAGGCATCCAGTCCCAGGGTACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517932.1
CDS GCA 72 bp AGCTGTCTGCAGAGGGATTGCTGGGTGCAGAGTCACTaGCTCTCCGTCTGTCAACTGCTGCTGCTCCAGAAT +
Preference number: 6 (lower is better)
Translates to: SCLQRDCWVQSH*LSVCQLLLLQN
Trigger: ATTCTGGAGCAGCAGCAGTTGACAGACGGAGAGGCAGTGACTCTGCACCCAGCAATCCCTCTGCAGACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000338087.10
ENST00000517615.1
ENST00000517932.1
ENST00000518594.1
ENST00000519341.5
ENST00000519558.5
ENST00000519747.5
ENST00000520106.5
ENST00000521302.5
ENST00000521823.5
ENST00000522002.5
ENST00000522432.5
ENST00000522946.5
ENST00000523224.5
ENST00000523610.5
CDS GCA 72 bp TCTTGCCAGTCAGAGTTCAGTCTCCGTGACAGAAGGTaGTGTGTCCGGGCTTCACACACTGGGCATGACTCC +
Preference number: 6 (lower is better)
Translates to: SCQSEFSLRDRR*CVRASHTGHDS
Trigger: GGAGTCATGCCCAGTGTGTGAAGCCCGGACACAGCACCTTCTGTCACGGAGACTGAACTCTGACTGGCAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519558.5
ENST00000522946.5
CDS CAA 90 bp AGCGACTTTTACAGGACCCTCACATGGAAGGAAGGAAGCCAAGATTaGTGCCCAGGTGTTCAGGGCTCCAAAGCCACCCAGGAGGCTGCA +
Preference number: 6 (lower is better)
Translates to: SDFYRTLTWKEGSQD*CPGVQGSKATQEAA
Trigger: TGCAGCCTCCTGGGTGGCTTTGGAGCCCTGAACACCTGGGCACAAATCTTGGCTTCCTTCCTTCCATGTGAGGGTCCTGTAAAAGTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518565.5
ENST00000522002.5
CDS GCA 72 bp TCTCTGCTGTTGCTTGCACTCCCACCCGTTCTGTCTTaGCAGTCAGAGTTCAGTCTCCGTGACAGAAGGTGC +
Preference number: 6 (lower is better)
Translates to: SLLLLALPPVLS*QSEFSLRDRRC
Trigger: GCACCTTCTGTCACGGAGACTGAACTCTGACTGGCAAGACAGAACGGGTGGGAGTGCAAGCAACAGCAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519558.5
CDS CCA 72 bp TCCAGAATAAACAGGCAGCCGGGCTTCTCGCGGTTGTaGAGAAGCAGCCCATGCTACACAGAAGAACTGCAG +
Preference number: 6 (lower is better)
Translates to: SRINRQPGFSRL*RSSPCYTEELQ
Trigger: CTGCAGTTCTTCTGTGTAGCATGGGCTGCTTCTCCACAACCGCGAGAAGCCCGGCTGCCTGTTTATTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000338087.10
ENST00000517615.1
ENST00000517932.1
ENST00000518594.1
ENST00000519341.5
ENST00000519558.5
ENST00000519747.5
ENST00000520106.5
ENST00000521302.5
ENST00000521823.5
ENST00000522432.5
ENST00000522946.5
ENST00000523610.5
CDS CCA 72 bp GACGGGGAAAGTCAACCGTGCCCTGAGCCCTCCAAGTaGAGAATGACCCAGTTTAGAGAGCATCGTGCATCA +
Preference number: 6 (lower is better)
Translates to: DGESQPCPEPSK*RMTQFREHRAS
Trigger: TGATGCACGATGCTCTCTAAACTGGGTCATTCTCCACTTGGAGGGCTCAGGGCACGGTTGACTTTCCCCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427060.6
CDS CAA 72 bp TGCTCCAGAATAAACAGGCAGCCGGGCTTCTCGCGGTaGTGGAGAAGCAGCCCATGCTACACAGAAGAACTG +
Preference number: 6 (lower is better)
Translates to: CSRINRQPGFSR*WRSSPCYTEEL
Trigger: CAGTTCTTCTGTGTAGCATGGGCTGCTTCTCCACAACCGCGAGAAGCCCGGCTGCCTGTTTATTCTGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000338087.10
ENST00000517615.1
ENST00000517932.1
ENST00000518594.1
ENST00000519341.5
ENST00000519558.5
ENST00000519747.5
ENST00000520106.5
ENST00000521302.5
ENST00000521823.5
ENST00000522432.5
ENST00000522946.5
ENST00000523610.5
CDS CAA 90 bp AACTGCTGCTGCTCCAGAATAAACAGGCAGCCGGGCTTCTCGCGGTaGTGGAGAAGCAGCCCATGCTACACAGAAGAACTGCAGTTGCTA +
Preference number: 6 (lower is better)
Translates to: NCCCSRINRQPGFSR*WRSSPCYTEELQLL
Trigger: TAGCAACTGCAGTTCTTCTGTGTAGCATGGGCTGCTTCTCCACAACCGCGAGAAGCCCGGCTGCCTGTTTATTCTGGAGCAGCAGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000338087.10
ENST00000517615.1
ENST00000517932.1
ENST00000519341.5
ENST00000519558.5
ENST00000519747.5
ENST00000520106.5
ENST00000521302.5
ENST00000521823.5
ENST00000522432.5
ENST00000522946.5
ENST00000523610.5
CDS GCA 72 bp CCTGGGTTCTTCTACGCTAACAGTCTTCTCTGCTGTTaGTTGCACTCCCACCCGTTCTGTCTTGCCAGTCAG +
Preference number: 6 (lower is better)
Translates to: PGFFYANSLLCC*LHSHPFCLASQ
Trigger: CTGACTGGCAAGACAGAACGGGTGGGAGTGCAAGCAACAGCAGAGAAGACTGTTAGCGTAGAAGAACCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519558.5
CDS CCA 72 bp TGCCCAGGCCCTCAAACAGCCAGCCATGGTAAACTCTaGCCACACATATTCCAGGGATGTAACTCTCTCGAC +
Preference number: 6 (lower is better)
Translates to: CPGPQTASHGKL*PHIFQGCNSLD
Trigger: GTCGAGAGAGTTACATCCCTGGAATATGTGTGGCCAGAGTTTACCATGGCTGGCTGTTTGAGGGCCTGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517648.5
ENST00000519341.5
ENST00000521823.5
ENST00000522119.5
ENST00000523224.5
ENST00000524345.5
CDS GCA 72 bp AGGAAGTCGCTATCCAGTCCGGTGGAGCATCAGGGCTaGCTGAGATGTTCTCCATTCGCAGCAAATGATCTT +
Preference number: 6 (lower is better)
Translates to: RKSLSSPVEHQG*LRCSPFAANDL
Trigger: AAGATCATTTGCTGCGAATGGAGAACATCTCAGGCAGCCCTGATGCTCCACCGGACTGGATAGCGACTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524345.5
CDS CCA 72 bp AGCCCATGCTACACAGAAGAACTGCAGTTGCTAAACTaGCCGCATACTTCCTCTGCTAGGAACGAGGAAGGC +
Preference number: 6 (lower is better)
Translates to: SPCYTEELQLLN*PHTSSARNEEG
Trigger: GCCTTCCTCGTTCCTAGCAGAGGAAGTATGCGGCCAGTTTAGCAACTGCAGTTCTTCTGTGTAGCATGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000338087.10
ENST00000517615.1
ENST00000517932.1
ENST00000519341.5
ENST00000519558.5
ENST00000519747.5
ENST00000521302.5
ENST00000521823.5
ENST00000522946.5
ENST00000523610.5
CDS CCA 72 bp CTGCAGAGGCCTCACTGGAACGACCATGGTAAACTCTaGCCACACATATTCCAGGGATGTAACTCTCTCGAC +
Preference number: 6 (lower is better)
Translates to: LQRPHWNDHGKL*PHIFQGCNSLD
Trigger: GTCGAGAGAGTTACATCCCTGGAATATGTGTGGCCAGAGTTTACCATGGTCGTTCCAGTGAGGCCTCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518565.5
ENST00000522002.5
CDS CCA 72 bp AGACCCACCCATTTTCTTCAGACCAAAGACGGAGGGTaGGTACAGGATCCATCAAGTCCCTCTGAAGACCCT +
Preference number: 6 (lower is better)
Translates to: RPTHFLQTKDGG*VQDPSSPSEDP
Trigger: AGGGTCTTCAGAGGGACTTGATGGATCCTGTACCCACCCTCCGTCTTTGGTCTGAAGAAAATGGGTGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522946.5
ENST00000523610.5
CDS CAA 72 bp GGGTTCTTCTACGCTAACAGTCTTCTCTGCTGTTGCTaGCACTCCCACCCGTTCTGTCTTGCCAGTCAGAGT +
Preference number: 6 (lower is better)
Translates to: GFFYANSLLCCC*HSHPFCLASQS
Trigger: ACTCTGACTGGCAAGACAGAACGGGTGGGAGTGCAAGCAACAGCAGAGAAGACTGTTAGCGTAGAAGAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519558.5
CDS GCA 72 bp AAGCTTCTCTCTGCAAGGACGGTGGAGCATCAGGGCTaGCTGAGATGTTCTCCATTCGCAGCAAATGATCTT +
Preference number: 6 (lower is better)
Translates to: KLLSARTVEHQG*LRCSPFAANDL
Trigger: AAGATCATTTGCTGCGAATGGAGAACATCTCAGGCAGCCCTGATGCTCCACCGTCCTTGCAGAGAGAAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519558.5
ENST00000521302.5
ENST00000521823.5
CDS GCA 72 bp GCAGCCTCACATCTTCAGCATGAAGGCATTGATGCATaGTTGCTAGTGAATGAATGGCTCCAGGGCAAGCAG +
Preference number: 6 (lower is better)
Translates to: AASHLQHEGIDA*LLVNEWLQGKQ
Trigger: CTGCTTGCCCTGGAGCCATTCATTCACTAGCAAGCATGCATCAATGCCTTCATGCTGAAGATGTGAGGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518565.5
ENST00000522002.5
CDS GCA 72 bp CCCTCCCATAACATTTCCCAGCTGTTTACCACTCTGTaGCAGGAGCACCATGTTAGAGCTGAAAGGTCCAAC +
Preference number: 6 (lower is better)
Translates to: PSHNISQLFTTL*QEHHVRAERSN
Trigger: GTTGGACCTTTCAGCTCTAACATGGTGCTCCTGGCACAGAGTGGTAAACAGCTGGGAAATGTTATGGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520106.5
CDS CCA 72 bp GAATGTCACGTGACCTCCTCCAGTCCTGCTGATTACTaGACAGAGCTCATCTGGAGGTCACCAGTACATATG +
Preference number: 6 (lower is better)
Translates to: ECHVTSSSPADY*TELIWRSPVHM
Trigger: CATATGTACTGGTGACCTCCAGATGAGCTCTGTCCAGTAATCAGCAGGACTGGAGGAGGTCACGTGACATTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517932.1
CDS CAA 90 bp CTGCACAGCATGCTGCCTACACACTGCGTTCAGTTTTGTTCTCAGTaGCTGGAAAAATTTCCAGCAGGAGTCATCAGGCCTGATGTTGGC +
Preference number: 6 (lower is better)
Translates to: LHSMLPTHCVQFCSQ*LEKFPAGVIRPDVG
Trigger: GCCAACATCAGGCCTGATGACTCCTGCTGGAAATTTTTCCAGCAACTGAGAACAAAACTGAACGCAGTGTGTAGGCAGCATGCTGTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523224.5
CDS GCA 72 bp GGGAAATGTAGTACCAGTTGTTGGGCAGACGGAAAATaGGGTAATGCTTTACCTGCCTGTGTCTCACCGACA +
Preference number: 6 (lower is better)
Translates to: GKCSTSCWADGK*GNALPACVSPT
Trigger: TGTCGGTGAGACACAGGCAGGTAAAGCATTACCGCATTTTCCGTCTGCCCAACAACTGGTACTACATTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000522119.5
ENST00000524345.5
CDS GCA 72 bp TCCACAAACTGGGATTTAGCGGTGGAGCATCAGGGCTaGCTGAGATGTTCTCCATTCGCAGCAAATGATCTT +
Preference number: 6 (lower is better)
Translates to: STNWDLAVEHQG*LRCSPFAANDL
Trigger: AAGATCATTTGCTGCGAATGGAGAACATCTCAGGCAGCCCTGATGCTCCACCGCTAAATCCCAGTTTGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519747.5
CDS GCA 72 bp CTAGACACACTGACTTCTAGTCTCTGCACTGTGCTGTaGCCTCCCATAACATTTCCCAGCTGTTTACCACTC +
Preference number: 6 (lower is better)
Translates to: LDTLTSSLCTVL*PPITFPSCLPL
Trigger: GAGTGGTAAACAGCTGGGAAATGTTATGGGAGGGCACAGCACAGTGCAGAGACTAGAAGTCAGTGTGTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520106.5
CDS CAA 72 bp CAGAACGTGACTCCCACGGCAGCTCCTGCTTCAGTTTaGTTTAGCTTCATCATCCTAAGCATGGAAGTGGCA +
Preference number: 6 (lower is better)
Translates to: QNVTPTAAPASV*FSFIILSMEVA
Trigger: TGCCACTTCCATGCTTAGGATGATGAAGCTAAACAAAACTGAAGCAGGAGCTGCCGTGGGAGTCACGTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518565.5
ENST00000522002.5
CDS TCA 72 bp AAAGTCAACCGTGCCCTGAGCCCTCCAAGTGGAGAATaGCCCAGTTTAGAGAGCATCGTGCATCATTTTTCT +
Preference number: 6 (lower is better)
Translates to: KVNRALSPPSGE*PSLESIVHHFS
Trigger: AGAAAAATGATGCACGATGCTCTCTAAACTGGGTCATTCTCCACTTGGAGGGCTCAGGGCACGGTTGACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427060.6
CDS TCA 72 bp GAGTCACAGAGTTCTTTGGTGGCCGACCCAGAATGTTaGCACAGGTGCAGCTATTACGGCACAATCTTTCTA +
Preference number: 6 (lower is better)
Translates to: ESQSSLVADPEC*HRCSYYGTIFL
Trigger: TAGAAAGATTGTGCCGTAATAGCTGCACCTGTGTCAACATTCTGGGTCGGCCACCAAAGAACTCTGTGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517615.1
CDS TCA 72 bp GAGCTGTCTGATTTAGTTACGGAGCACAGAGGAAACTaGTATCGGGACTGTCTGTGCAGCAAGAGCAACACA +
Preference number: 6 (lower is better)
Translates to: ELSDLVTEHRGN*YRDCLCSKSNT
Trigger: TGTGTTGCTCTTGCTGCACAGACAGTCCCGATATCAGTTTCCTCTGTGCTCCGTAACTAAATCAGACAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523224.5
CDS GCA 72 bp TTTTTCTCATCCGAAGGATTTCCAGACCCTGGGGGCTaGCTTCCCGGTCTTCATTCCTACATAACATCAACA +
Preference number: 6 (lower is better)
Translates to: FFSSEGFPDPGG*LPGLHSYITST
Trigger: TGTTGATGTTATGTAGGAATGAAGACCGGGAAGGCAGCCCCCAGGGTCTGGAAATCCTTCGGATGAGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000518594.1
ENST00000519504.5
CDS GCA 72 bp CTGGGTTGGGAGCAGGACTATCTCTTCTTGACCCAGTaGCTTCCTTACCACTATGAATGCTGGAATCTTTGT +
Preference number: 6 (lower is better)
Translates to: LGWEQDYLFLTQ*LPYHYECWNLC
Trigger: ACAAAGATTCCAGCATTCATAGTGGTAAGGAAGGCACTGGGTCAAGAAGAGATAGTCCTGCTCCCAACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520106.5
CDS GCA 72 bp GTGGGCTGCAGGGAGCTTAACTACATTGGATCAATTTaGATGGACGTAGGAGGAAGGAAAATGAAGCCGTGT +
Preference number: 6 (lower is better)
Translates to: VGCRELNYIGSI*MDVGGRKMKPC
Trigger: ACACGGCTTCATTTTCCTTCCTCCTACGTCCATGCAAATTGATCCAATGTAGTTAAGCTCCCTGCAGCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523224.5
CDS GCA 72 bp CCATACCAAAGGCCACATTCTATCTGCACAGCATGCTaGCTACACACTGCGTTCAGTTTTGTTCTCAGTTGC +
Preference number: 6 (lower is better)
Translates to: PYQRPHSICTAC*LHTAFSFVLSC
Trigger: GCAACTGAGAACAAAACTGAACGCAGTGTGTAGGCAGCATGCTGTGCAGATAGAATGTGGCCTTTGGTATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523224.5
CDS CAA 72 bp AGAGTCACAGAGTTCTTTGGTGGCCGACCCAGAATGTaGACACAGGTGCAGCTATTACGGCACAATCTTTCT +
Preference number: 6 (lower is better)
Translates to: RVTEFFGGRPRM*TQVQLLRHNLS
Trigger: AGAAAGATTGTGCCGTAATAGCTGCACCTGTGTCAACATTCTGGGTCGGCCACCAAAGAACTCTGTGACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517615.1
CDS CAA 90 bp GACTTGTACAGAGTCACAGAGTTCTTTGGTGGCCGACCCAGAATGTaGACACAGGTGCAGCTATTACGGCACAATCTTTCTATGTTGCCA +
Preference number: 6 (lower is better)
Translates to: DLYRVTEFFGGRPRM*TQVQLLRHNLSMLP
Trigger: TGGCAACATAGAAAGATTGTGCCGTAATAGCTGCACCTGTGTCAACATTCTGGGTCGGCCACCAAAGAACTCTGTGACTCTGTACAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517615.1
CDS CAA 90 bp CATCTCTTTCAGAACGTGACTCCCACGGCAGCTCCTGCTTCAGTTTaGTTTAGCTTCATCATCCTAAGCATGGAAGTGGCATCTGGTATT +
Preference number: 6 (lower is better)
Translates to: HLFQNVTPTAAPASV*FSFIILSMEVASGI
Trigger: AATACCAGATGCCACTTCCATGCTTAGGATGATGAAGCTAAACAAAACTGAAGCAGGAGCTGCCGTGGGAGTCACGTTCTGAAAGAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518565.5
ENST00000522002.5
CDS TCA 72 bp AGAGATAAGTTAGCCCAAGGTTGCTCCTTTCCTTATTaGCTGGGTTGGGAGCAGGACTATCTCTTCTTGACC +
Preference number: 6 (lower is better)
Translates to: RDKLAQGCSFPY*LGWEQDYLFLT
Trigger: GGTCAAGAAGAGATAGTCCTGCTCCCAACCCAGTCAATAAGGAAAGGAGCAACCTTGGGCTAACTTATCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520106.5
CDS TCA 72 bp CTGTGTGAGAGGACACATGTGATTCTCGGAGCTGTCTaGTTTAGTTACGGAGCACAGAGGAAACTGATATCG +
Preference number: 6 (lower is better)
Translates to: LCERTHVILGAV*FSYGAQRKLIS
Trigger: CGATATCAGTTTCCTCTGTGCTCCGTAACTAAATCAGACAGCTCCGAGAATCACATGTGTCCTCTCACACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523224.5
CDS CCA 72 bp TTTTCTTCTTTCGATCAAAGGAGGTGTTGTCCTCACTaGTCAGGGACAGGTAAGAGGCAATGCTCTCTCGAA +
Preference number: 6 (lower is better)
Translates to: FSSFDQRRCCPH*SGTGKRQCSLE
Trigger: TTCGAGAGAGCATTGCCTCTTACCTGTCCCTGACCAGTGAGGACAACACCTCCTTTGATCGAAAGAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517549.1
ENST00000517648.5
ENST00000524345.5
CDS CAA 90 bp TCCCAGGCAATAGTTGGAACTTCTGTTCCTTTTGGGCATGAACCATaGTGTCTGTTCTTGGCTAGTCCTCAAAGTAAGGTGGTGATGAGA +
Preference number: 6 (lower is better)
Translates to: SQAIVGTSVPFGHEP*CLFLASPQSKVVMR
Trigger: TCTCATCACCACCTTACTTTGAGGACTAGCCAAGAACAGACACAATGGTTCATGCCCAAAAGGAACAGAAGTTCCAACTATTGCCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517549.1
ENST00000517648.5
ENST00000524345.5
CDS TCA 72 bp TATCCTGCTTTGAAGATTGCACAAGTTTTGGAGAGCTaGCTCACTCAGAAATCACACGCAGTTTCTCCCCTC +
Preference number: 6 (lower is better)
Translates to: YPALKIAQVLES*LTQKSHAVSPL
Trigger: GAGGGGAGAAACTGCGTGTGATTTCTGAGTGAGTCAGCTCTCCAAAACTTGTGCAATCTTCAAAGCAGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518594.1
ENST00000519504.5
CDS TCA 72 bp TCACCAGCATACGCATCATGCTTAATTGCTGCCATTTaGGAAATGTACTCACCCATGGTAAACTCTGGCCAC +
Preference number: 6 (lower is better)
Translates to: SPAYASCLIAAI*EMYSPMVNSGH
Trigger: GTGGCCAGAGTTTACCATGGGTGAGTACATTTCTCAAATGGCAGCAATTAAGCATGATGCGTATGCTGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520106.5
CDS TCA 72 bp GGGACTGTCTGTGCAGCAAGAGCAACACAAATACTATaGCATTTGAATCTCACCACACCCTTACAAGGGAGA +
Preference number: 6 (lower is better)
Translates to: GTVCAARATQIL*HLNLTTPLQGR
Trigger: TCTCCCTTGTAAGGGTGTGGTGAGATTCAAATGTCATAGTATTTGTGTTGCTCTTGCTGCACAGACAGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523224.5
CDS GCA 72 bp AGCTCTTTCTCTTGCTGCCACCATACATCAGGGAGATaGTTTTCTTCTTTCGATCAAAGGAGGTGTTGTCCT +
Preference number: 6 (lower is better)
Translates to: SSFSCCHHTSGR*FSSFDQRRCCP
Trigger: AGGACAACACCTCCTTTGATCGAAAGAAGAAAAGCATCTCCCTGATGTATGGTGGCAGCAAGAGAAAGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517549.1
ENST00000517648.5
ENST00000524345.5
CDS CCA 72 bp TGCCATTTGAGAAATGTACTCACCCATGGTAAACTCTaGCCACACATATTCCAGGGATGTAACTCTCTCGAC +
Preference number: 6 (lower is better)
Translates to: CHLRNVLTHGKL*PHIFQGCNSLD
Trigger: GTCGAGAGAGTTACATCCCTGGAATATGTGTGGCCAGAGTTTACCATGGGTGAGTACATTTCTCAAATGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520106.5
CDS CCA 72 bp GGACCAATGTTATTTCCTTTGTGTGAACTTGGACCTTaGTTTCCTGTTCTTCACACACTGGGCATGACTCCT +
Preference number: 6 (lower is better)
Translates to: GPMLFPLCELGP*FPVLHTLGMTP
Trigger: AGGAGTCATGCCCAGTGTGTGAAGAACAGGAAACCAAGGTCCAAGTTCACACAAAGGAAATAACATTGGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521302.5
CDS CAA 90 bp TCCAATGTGCTTTGCATTTCTTTGCCAACTTCCAGCTTCCGACACTaGACAGATGAGGATAATGTAACTCCAGGAGGTGAAGCGACTTTT +
Preference number: 6 (lower is better)
Translates to: SNVLCISLPTSSFRH*TDEDNVTPGGEATF
Trigger: AAAAGTCGCTTCACCTCCTGGAGTTACATTATCCTCATCTGTCAAGTGTCGGAAGCTGGAAGTTGGCAAAGAAATGCAAAGCACATTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518565.5
ENST00000522002.5
CDS TCA 72 bp AGCTTATTGATGAAACAGGTAAAATTTCTGGAATGCTaGCCCCAAGATTGCCTGGGAATTGCCTGCTTGAGC +
Preference number: 6 (lower is better)
Translates to: SLLMKQVKFLEC*PQDCLGIACLS
Trigger: GCTCAAGCAGGCAATTCCCAGGCAATCTTGGGGTCAGCATTCCAGAAATTTTACCTGTTTCATCAATAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517615.1
CDS TCA 72 bp CTATCTCTTCTTGACCCAGTGCCTTCCTTACCACTATaGATGCTGGAATCTTTGTTCCACCTTATGAGTCAC +
Preference number: 6 (lower is better)
Translates to: LSLLDPVPSLPL*MLESLFHLMSH
Trigger: GTGACTCATAAGGTGGAACAAAGATTCCAGCATTCATAGTGGTAAGGAAGGCACTGGGTCAAGAAGAGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520106.5
CDS CAA 72 bp CTTTGCATTTCTTTGCCAACTTCCAGCTTCCGACACTaGACAGATGAGGATAATGTAACTCCAGGAGGTGAA +
Preference number: 6 (lower is better)
Translates to: LCISLPTSSFRH*TDEDNVTPGGE
Trigger: TTCACCTCCTGGAGTTACATTATCCTCATCTGTCAAGTGTCGGAAGCTGGAAGTTGGCAAAGAAATGCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518565.5
ENST00000522002.5
CDS TCA 72 bp CTGCAAGGACTTGAATTGTTAGAAGGCTCTGTGGATTaGTCAAGTCAGACTATTCAAATAAACCCAGTGGGG +
Preference number: 6 (lower is better)
Translates to: LQGLELLEGSVD*SSQTIQINPVG
Trigger: CCCCACTGGGTTTATTTGAATAGTCTGACTTGATCAATCCACAGAGCCTTCTAACAATTCAAGTCCTTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517932.1
ENST00000519341.5
CDS TCA 72 bp TACCACTATGAATGCTGGAATCTTTGTTCCACCTTATaGGTCACCAGCATACGCATCATGCTTAATTGCTGC +
Preference number: 6 (lower is better)
Translates to: YHYECWNLCSTL*VTSIRIMLNCC
Trigger: GCAGCAATTAAGCATGATGCGTATGCTGGTGACTCATAAGGTGGAACAAAGATTCCAGCATTCATAGTGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520106.5
CDS TCA 72 bp AAGGAAATTGTAATGCTAGTGATGATGGTGACTGTGTaGGAGGACACATGTGATTCTCGGAGCTGTCTGATT +
Preference number: 6 (lower is better)
Translates to: KEIVMLVMMVTV*EDTCDSRSCLI
Trigger: AATCAGACAGCTCCGAGAATCACATGTGTCCTCTCACACAGTCACCATCATCACTAGCATTACAATTTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523224.5
CDS GCA 72 bp CTATTACGGCACAATCTTTCTATGTTGCCATCTTGCTaGTCTGATCTAGATTGTAGATCTTCACACACTGGG +
Preference number: 6 (lower is better)
Translates to: LLRHNLSMLPSC*SDLDCRSSHTG
Trigger: CCCAGTGTGTGAAGATCTACAATCTAGATCAGAGCAGCAAGATGGCAACATAGAAAGATTGTGCCGTAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517615.1
CDS CAA 72 bp ATAGTTGGAACTTCTGTTCCTTTTGGGCATGAACCATaGTGTCTGTTCTTGGCTAGTCCTCAAAGTAAGGTG +
Preference number: 6 (lower is better)
Translates to: IVGTSVPFGHEP*CLFLASPQSKV
Trigger: CACCTTACTTTGAGGACTAGCCAAGAACAGACACAATGGTTCATGCCCAAAAGGAACAGAAGTTCCAACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338087.10
ENST00000395352.7
ENST00000427060.6
ENST00000517549.1
ENST00000517648.5
ENST00000524345.5
CDS CAA 72 bp AGAGCATCGTGCATCATTTTTCTGGCAGCTTGCTTCTaGAAAGGCGGCTGTTTATATGTGAAGATGAGATTG +
Preference number: 6 (lower is better)
Translates to: RASCIIFLAACF*KGGCLYVKMRL
Trigger: CAATCTCATCTTCACATATAAACAGCCGCCTTTCAAGAAGCAAGCTGCCAGAAAAATGATGCACGATGCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427060.6
CDS TCA 72 bp GACAGTCTGCCTACATTATCCAGGCATTCATTTGCATaGTCAAAAGCAGATTTGTTCCAAGATGCAATGTTC +
Preference number: 6 (lower is better)
Translates to: DSLPTLSRHSFA*SKADLFQDAMF
Trigger: GAACATTGCATCTTGGAACAAATCTGCTTTTGATCATGCAAATGAATGCCTGGATAATGTAGGCAGACTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395352.7
ENST00000518565.5
CDS CAA 72 bp TTTGTAAGGCTAAAATTGGAACTTGGGACCCTTGCTTaGCATCATGACAAAGAGCTCACTCTATTTGTGTTT +
Preference number: 6 (lower is better)
Translates to: FVRLKLELGTLA*HHDKELTLFVF
Trigger: AAACACAAATAGAGTGAGCTCTTTGTCATGATGCAAAGCAAGGGTCCCAAGTTCCAATTTTAGCCTTACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523224.5
CDS CAA 72 bp AAATTGACAGTCTGCCTACATTATCCAGGCATTCATTaGCATGATCAAAAGCAGATTTGTTCCAAGATGCAA +
Preference number: 6 (lower is better)
Translates to: KLTVCLHYPGIH*HDQKQICSKMQ
Trigger: TTGCATCTTGGAACAAATCTGCTTTTGATCATGCAAATGAATGCCTGGATAATGTAGGCAGACTGTCAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395352.7
ENST00000518565.5
CDS TCA 72 bp AGATGTTCTCCATTCGCAGCAAATGATCTTATTTTCTaGAGTAGCAGCTTTCTATTGAAATTCTTCATCAGT +
Preference number: 6 (lower is better)
Translates to: RCSPFAANDLIF*SSSFLLKFFIS
Trigger: ACTGATGAAGAATTTCAATAGAAAGCTGCTACTTCAGAAAATAAGATCATTTGCTGCGAATGGAGAACATCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395352.7
ENST00000518565.5
ENST00000519341.5