RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SKIV2L (Homo sapiens)

Ensembl gene IDs: ENSG00000204351, ENSG00000206353, ENSG00000223493, ENSG00000225737, ENSG00000228896, ENSG00000232616

Ensembl transcript IDs: ENST00000375394.7, ENST00000383336.6, ENST00000412823.4, ENST00000421789.4, ENST00000429465.4, ENST00000448219.4, ENST00000460033.5, ENST00000461073.5, ENST00000461360.5, ENST00000461915.5, ENST00000462557.5, ENST00000463549.5, ENST00000464208.1, ENST00000464568.5, ENST00000465225.5, ENST00000465599.5, ENST00000465703.5, ENST00000466290.1, ENST00000466463.5, ENST00000467720.5, ENST00000471547.5, ENST00000471708.1, ENST00000471818.1, ENST00000472288.5, ENST00000473290.5, ENST00000473773.5, ENST00000473816.5, ENST00000474839.5, ENST00000476338.5, ENST00000476485.5, ENST00000476651.5, ENST00000476793.1, ENST00000477512.5, ENST00000479061.1, ENST00000479139.5, ENST00000479354.5, ENST00000480573.5, ENST00000480914.5, ENST00000482606.1, ENST00000483553.5, ENST00000484085.5, ENST00000485243.5, ENST00000485285.5, ENST00000485349.5, ENST00000485471.5, ENST00000486945.5, ENST00000487095.1, ENST00000487359.5, ENST00000487690.5, ENST00000488599.1, ENST00000488648.5, ENST00000488686.5, ENST00000490619.5, ENST00000490951.5, ENST00000491926.5, ENST00000491970.1, ENST00000491994.1, ENST00000492133.5, ENST00000492290.1, ENST00000492900.1, ENST00000493433.1, ENST00000494058.5, ENST00000494416.1, ENST00000494521.5, ENST00000496229.5, ENST00000496789.1, ENST00000496986.5, ENST00000497600.5, ENST00000626050.1, ENST00000626668.1, ENST00000627011.1, ENST00000627041.1, ENST00000627683.1, ENST00000628157.1

Found 445 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCATCACAGCGGCCCCGGGAGAAGGTGAACACCACCACGGGCAACTaGGCACGTGTGCGGAGGGAGGCCAGGAGGGACAGGTACACTCCG +
Preference number: 1 (lower is better)
Translates to: SSQRPREKVNTTTGN*ARVRREARRDRYTP
Trigger: CGGAGTGTACCTGTCCCTCCTGGCCTCCCTCCGCACACGTGCCCAGTTGCCCGTGGTGGTGTTCACCTTCTCCCGGGGCCGCTGTGATGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR TCA 90 bp AGGTCATTGACAGGGTCGAGGGTGGGAGGTCCGGCTGGGTGGGCCTaGGCCAGACGCAGCAGTTCCTGGACAGCAGTGGTCACGGCTGCA +
Preference number: 1 (lower is better)
Translates to: RSLTGSRVGGPAGWA*ARRSSSWTAVVTAA
Trigger: TGCAGCCGTGACCACTGCTGTCCAGGAACTGCTGCGTCTGGCTCAGGCCCACCCAGCCGGACCTCCCACCCTCGACCCTGTCAATGACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CCA 90 bp TTTGAGCTGCAGGTCATTGACAGGGTCGAGGGTGGGAGGTCCGGCTaGGTGGGCCTGAGCCAGACGCAGCAGTTCCTGGACAGCAGTGGT +
Preference number: 1 (lower is better)
Translates to: FELQVIDRVEGGRSG*VGLSQTQQFLDSSG
Trigger: ACCACTGCTGTCCAGGAACTGCTGCGTCTGGCTCAGGCCCACCCAGCCGGACCTCCCACCCTCGACCCTGTCAATGACCTGCAGCTCAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR GCA 90 bp TTCCGGGCCCGGAGCCCACCCTCTACAACTGACATATCTTTGAGCTaGAGGTCATTGACAGGGTCGAGGGTGGGAGGTCCGGCTGGGTGG +
Preference number: 1 (lower is better)
Translates to: FRARSPPSTTDISLS*RSLTGSRVGGPAGW
Trigger: CCACCCAGCCGGACCTCCCACCCTCGACCCTGTCAATGACCTGCAGCTCAAAGATATGTCAGTTGTAGAGGGTGGGCTCCGGGCCCGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR GCA 90 bp CAGGAACAGCTTGAATCCCACGAGGTCATCTGGATAGGGCACCTCTaGAGTGGCTGGCCCCCTGTCCTGTGGGTCCTGGGACAAGGGCTT +
Preference number: 1 (lower is better)
Translates to: QEQLESHEVIWIGHL*SGWPPVLWVLGQGL
Trigger: AAGCCCTTGTCCCAGGACCCACAGGACAGGGGGCCAGCCACTGCAGAGGTGCCCTATCCAGATGACCTCGTGGGATTCAAGCTGTTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR GCA 90 bp GCCAACTCGGAGAAGGGCTGTGGGGAAAGTAGGGTGAGGACTGGATaGACTCAGCCTGGGCAGGTTCTCCCCAGCCAGCCGTCTGCAAAA +
Preference number: 1 (lower is better)
Translates to: ANSEKGCGESRVRTG*TQPGQVLPSQPSAK
Trigger: TTTTGCAGACGGCTGGCTGGGGAGAACCTGCCCAGGCTGAGTGCATCCAGTCCTCACCCTACTTTCCCCACAGCCCTTCTCCGAGTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483553.5
ENST00000491994.1
3UTR CCA 90 bp ACAAGGCCCTTCAGGCAGGAACAGCTTGAATCCCACGAGGTCATCTaGATAGGGCACCTCTGCAGTGGCTGGCCCCCTGTCCTGTGGGTC +
Preference number: 1 (lower is better)
Translates to: TRPFRQEQLESHEVI*IGHLCSGWPPVLWV
Trigger: GACCCACAGGACAGGGGGCCAGCCACTGCAGAGGTGCCCTATCCAGATGACCTCGTGGGATTCAAGCTGTTCCTGCCTGAAGGGCCTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CCA 90 bp CCCATTCACCCGGAGCACCTTGGTGGTGATGGCAGCCATATCTCCTaGCTGGAGCTTGACCACGGTGTGGTCACAAGGCCCTTCAGGCAG +
Preference number: 1 (lower is better)
Translates to: PIHPEHLGGDGSHIS*LELDHGVVTRPFRQ
Trigger: CTGCCTGAAGGGCCTTGTGACCACACCGTGGTCAAGCTCCAGCCAGGAGATATGGCTGCCATCACCACCAAGGTGCTCCGGGTGAATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR TCA 90 bp GATCAGCTCCTCCAGCTTCCGGGCCCGGAGCCCACCCTCTACAACTaGCATATCTTTGAGCTGCAGGTCATTGACAGGGTCGAGGGTGGG +
Preference number: 1 (lower is better)
Translates to: DQLLQLPGPEPTLYN*HIFELQVIDRVEGG
Trigger: CCCACCCTCGACCCTGTCAATGACCTGCAGCTCAAAGATATGTCAGTTGTAGAGGGTGGGCTCCGGGCCCGGAAGCTGGAGGAGCTGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR GCA 90 bp AGCATCTCCACGATCTCCTTGAGGATGGGCAGGATGCCGCTATGGTaGACACCCAGGCCGCGATTCAGGAGCTCTGACATGTGCAGGACC +
Preference number: 1 (lower is better)
Translates to: SISTISLRMGRMPLW*TPRPRFRSSDMCRT
Trigger: GGTCCTGCACATGTCAGAGCTCCTGAATCGCGGCCTGGGTGTGCACCATAGCGGCATCCTGCCCATCCTCAAGGAGATCGTGGAGATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CCA 90 bp TTCACCCGGAGCACCTTGGTGGTGATGGCAGCCATATCTCCTGGCTaGAGCTTGACCACGGTGTGGTCACAAGGCCCTTCAGGCAGGAAC +
Preference number: 1 (lower is better)
Translates to: FTRSTLVVMAAISPG*SLTTVWSQGPSGRN
Trigger: GTTCCTGCCTGAAGGGCCTTGTGACCACACCGTGGTCAAGCTCCAGCCAGGAGATATGGCTGCCATCACCACCAAGGTGCTCCGGGTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CCA 90 bp AAGAGCATCTCCACGATCTCCTTGAGGATGGGCAGGATGCCGCTATaGTGCACACCCAGGCCGCGATTCAGGAGCTCTGACATGTGCAGG +
Preference number: 1 (lower is better)
Translates to: KSISTISLRMGRMPL*CTPRPRFRSSDMCR
Trigger: CCTGCACATGTCAGAGCTCCTGAATCGCGGCCTGGGTGTGCACCATAGCGGCATCCTGCCCATCCTCAAGGAGATCGTGGAGATGCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CCA 90 bp TCCACTCGCAGCAAGTTGAGGATCATAGTGTACGTGAGGCGGAACTaGGACTGCAGCTGGGACGGCTTCCCCATCATCATGCGGTGCAGG +
Preference number: 1 (lower is better)
Translates to: STRSKLRIIVYVRRN*DCSWDGFPIIMRCR
Trigger: CCTGCACCGCATGATGATGGGGAAGCCGTCCCAGCTGCAGTCCCAGTTCCGCCTCACGTACACTATGATCCTCAACTTGCTGCGAGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CCA 90 bp CCAGTTGGCCAGTCATGTCAGGCTCCTCCAAAGCTCCCAGCCTCTTaGTCAGTTCAGCCAGGGCCTGTTCATGGGCCTTGCTGTCTTTGC +
Preference number: 1 (lower is better)
Translates to: PVGQSCQAPPKLPAS*SVQPGPVHGPCCLC
Trigger: GCAAAGACAGCAAGGCCCATGAACAGGCCCTGGCTGAACTGACCAAGAGGCTGGGAGCTTTGGAGGAGCCTGACATGACTGGCCAACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CCA 90 bp GTCATCTGGATAGGGCACCTCTGCAGTGGCTGGCCCCCTGTCCTGTaGGTCCTGGGACAAGGGCTTATCACACAAGACCAGGGTTGTGAA +
Preference number: 1 (lower is better)
Translates to: VIWIGHLCSGWPPVL*VLGQGLITQDQGCE
Trigger: TTCACAACCCTGGTCTTGTGTGATAAGCCCTTGTCCCAGGACCCACAGGACAGGGGGCCAGCCACTGCAGAGGTGCCCTATCCAGATGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CCA 90 bp CTTGAATCCCACGAGGTCATCTGGATAGGGCACCTCTGCAGTGGCTaGCCCCCTGTCCTGTGGGTCCTGGGACAAGGGCTTATCACACAA +
Preference number: 1 (lower is better)
Translates to: LESHEVIWIGHLCSG*PPVLWVLGQGLITQ
Trigger: TTGTGTGATAAGCCCTTGTCCCAGGACCCACAGGACAGGGGGCCAGCCACTGCAGAGGTGCCCTATCCAGATGACCTCGTGGGATTCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CCA 90 bp TCCCCCACAAATTCCTCCACCGTCTGGTTCAGGCCACAAGCCACCTaGACCTCACCAATCCGCTTGGCCACAGCCCGGACACGTTCTATT +
Preference number: 1 (lower is better)
Translates to: SPTNSSTVWFRPQAT*TSPIRLATARTRSI
Trigger: AATAGAACGTGTCCGGGCTGTGGCCAAGCGGATTGGTGAGGTCCAGGTGGCTTGTGGCCTGAACCAGACGGTGGAGGAATTTGTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
3UTR GCA 90 bp CCCCCTGATGTGTGGGCTGCTTGGCCCCAAAGGTCTGGGCGTGTTTaGTCATTCTCTCCTTCTTGGCCTCCACAGCTGCATAGTACCCTT +
Preference number: 1 (lower is better)
Translates to: PPDVWAAWPQRSGRV*SFSPSWPPQLHSTL
Trigger: AAGGGTACTATGCAGCTGTGGAGGCCAAGAAGGAGAGAATGAGCAAACACGCCCAGACCTTTGGGGCCAAGCAGCCCACACATCAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CCA 90 bp TCAAGGGCGTTGGGGACGGTGGCACTCAGAAGGATGATAGAAACGTaGTCAGGTAGCATGATAAGCACCTCCTCCCACACGACCCCACGC +
Preference number: 1 (lower is better)
Translates to: SRALGTVALRRMIET*SGSMISTSSHTTPR
Trigger: GCGTGGGGTCGTGTGGGAGGAGGTGCTTATCATGCTACCTGACCACGTTTCTATCATCCTTCTGAGTGCCACCGTCCCCAACGCCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CCA 90 bp CCCCAGGGAGCAGGTCCCGGAAGGTGGAGCCATCGTGTTTGCGCATaGAGTCAAACACTACTGTACGAGCAGGCATGTTTACTCCCATGG +
Preference number: 1 (lower is better)
Translates to: PQGAGPGRWSHRVCA*SQTLLYEQACLLPW
Trigger: CCATGGGAGTAAACATGCCTGCTCGTACAGTAGTGTTTGACTCCATGCGCAAACACGATGGCTCCACCTTCCGGGACCTGCTCCCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CCA 90 bp TCAACCAGCCCAAAATTCAGCTCCCCCACAAATTCCTCCACCGTCTaGTTCAGGCCACAAGCCACCTGGACCTCACCAATCCGCTTGGCC +
Preference number: 1 (lower is better)
Translates to: STSPKFSSPTNSSTV*FRPQATWTSPIRLA
Trigger: GGCCAAGCGGATTGGTGAGGTCCAGGTGGCTTGTGGCCTGAACCAGACGGTGGAGGAATTTGTGGGGGAGCTGAATTTTGGGCTGGTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
3UTR GCA 90 bp GCCAGAGAGCAAGGCAGCAATCTCCTCAGGCCGCAGGGTGCTCAGTaGATTGTCAAACATGAGCTCAGTGAGGAGCAACTCATGGCTGCT +
Preference number: 1 (lower is better)
Translates to: AREQGSNLLRPQGAQ*IVKHELSEEQLMAA
Trigger: AGCAGCCATGAGTTGCTCCTCACTGAGCTCATGTTTGACAATGCACTGAGCACCCTGCGGCCTGAGGAGATTGCTGCCTTGCTCTCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
3UTR CCA 90 bp GTGCTCAGTGCATTGTCAAACATGAGCTCAGTGAGGAGCAACTCATaGCTGCTCATGGCACAAGCCACCCGCCCTGCCAGCTTCACAGTG +
Preference number: 1 (lower is better)
Translates to: VLSALSNMSSVRSNS*LLMAQATRPASFTV
Trigger: CACTGTGAAGCTGGCAGGGCGGGTGGCTTGTGCCATGAGCAGCCATGAGTTGCTCCTCACTGAGCTCATGTTTGACAATGCACTGAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
3UTR GCA 90 bp CATACTCCCCAGGGAGCAGGTCCCGGAAGGTGGAGCCATCGTGTTTaGGCATGGAGTCAAACACTACTGTACGAGCAGGCATGTTTACTC +
Preference number: 1 (lower is better)
Translates to: HTPQGAGPGRWSHRV*AWSQTLLYEQACLL
Trigger: GAGTAAACATGCCTGCTCGTACAGTAGTGTTTGACTCCATGCGCAAACACGATGGCTCCACCTTCCGGGACCTGCTCCCTGGGGAGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR TCA 90 bp TGCGTTGTGATGCTCCTGATTCTTCACAACCACCACCCTTCCTGCTaGGAGAGACTTCAGCCCGTTCACAGACTCCATGATGCGTCGCTG +
Preference number: 1 (lower is better)
Translates to: CVVMLLILHNHHPSC*ERLQPVHRLHDASL
Trigger: CAGCGACGCATCATGGAGTCTGTGAACGGGCTGAAGTCTCTCTCAGCAGGAAGGGTGGTGGTTGTGAAGAATCAGGAGCATCACAACGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR TCA 90 bp CCTGTGGGTCCTGGGACAAGGGCTTATCACACAAGACCAGGGTTGTaGATACTCTGCTGGTGGAGTTCGAGGAGACCTGTAGGATCACTC +
Preference number: 1 (lower is better)
Translates to: PVGPGTRAYHTRPGL*ILCWWSSRRPVGSL
Trigger: GAGTGATCCTACAGGTCTCCTCGAACTCCACCAGCAGAGTATTCACAACCCTGGTCTTGTGTGATAAGCCCTTGTCCCAGGACCCACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR TCA 90 bp ACAAAGACAGAGTCATGCCGTTCCAAGTGCAGGATGGCCTGTTTCTaGAACACATCTGGCTCAAATGCCCACTGGAAGGCTGGCTGGGGA +
Preference number: 1 (lower is better)
Translates to: TKTESCRSKCRMACF*NTSGSNAHWKAGWG
Trigger: TCCCCAGCCAGCCTTCCAGTGGGCATTTGAGCCAGATGTGTTTCAGAAACAGGCCATCCTGCACTTGGAACGGCATGACTCTGTCTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
3UTR CCA 90 bp TGTGAGCTGCGACAAAGACAGAGTCATGCCGTTCCAAGTGCAGGATaGCCTGTTTCTGAAACACATCTGGCTCAAATGCCCACTGGAAGG +
Preference number: 1 (lower is better)
Translates to: CELRQRQSHAVPSAG*PVSETHLAQMPTGR
Trigger: CCTTCCAGTGGGCATTTGAGCCAGATGTGTTTCAGAAACAGGCCATCCTGCACTTGGAACGGCATGACTCTGTCTTTGTCGCAGCTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
3UTR TCA 90 bp GTGAACCTCATCAAAGATGACCCACTCCAGGTCCCGAATAACATCTaGGCCACTGTACAGCATGGAGCGAAGGATCTCTGTGGTCATGAT +
Preference number: 1 (lower is better)
Translates to: VNLIKDDPLQVPNNI*ATVQHGAKDLCGHD
Trigger: ATCATGACCACAGAGATCCTTCGCTCCATGCTGTACAGTGGCTCAGATGTTATTCGGGACCTGGAGTGGGTCATCTTTGATGAGGTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
3UTR GCA 90 bp AATGGCATATTCAGCCACAACTGTTTTTCCTGCAGATGTGTGAGCTaGGACAAAGACAGAGTCATGCCGTTCCAAGTGCAGGATGGCCTG +
Preference number: 1 (lower is better)
Translates to: NGIFSHNCFSCRCVS*DKDRVMPFQVQDGL
Trigger: CAGGCCATCCTGCACTTGGAACGGCATGACTCTGTCTTTGTCGCAGCTCACACATCTGCAGGAAAAACAGTTGTGGCTGAATATGCCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
3UTR-3UTR CCA 90 bp GGCAACTGGGCACGTGTGCGGAGGGAGGCCAGGAGGGACAGGTACACTCCGCGGCCACTGCTCCTGAGATaGAGGCTCTGGGGCCTCTGG +
Preference number: 2 (lower is better)
Translates to: GNWARVRREARRDRYTPRPLLLR*RLWGLW
Trigger: CCAGAGGCCCCAGAGCCTCCATCTCAGGAGCAGTGG...CCGCGGAGTGTACCTGTCCCTCCTGGCCTCCCTCCGCACACGTGCCCAGTTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CAA 90 bp CCCATCATCATGCGGTGCAGGTCTGCCATCTCGGGCACTCGGCCCTaGCAGAGCAGGATAACGGTGCCTGTGGGGTCCAGGCCCCTCCGC +
Preference number: 2 (lower is better)
Translates to: PIIMRCRSAISGTRP*QSRITVPVGSRPLR
Trigger: GCGGAGGGGCCTGGACCCCACAGGCACCGTTATCCTGCTCTGCAAGGGCCGAGTGCCCGAGATGGCAGACCTGCACCGCATGATGATGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR-3UTR CCA 90 bp CGCTGTCTCCATCTTGGCACCCAGCACAGGCTCTCCTACCAGGCGGGCTGCCCCCTGGGGCCTCTGGGGTaGATACAGCTGTGGACGCTT +
Preference number: 2 (lower is better)
Translates to: RCLHLGTQHRLSYQAGCPLGPLG*IQLWTL
Trigger: AAGCGTCCACAGCTGTATCCACCCCAGAGGCCCCAG...GGGGCAGCCCGCCTGGTAGGAGAGCCTGTGCTGGGTGCCAAGATGGAGACAGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR-3UTR GCA 90 bp GAGCCAGACGCAGCAGTTCCTGGACAGCAGTGGTCACGGCTGCAAGGGGAGGATCATGCGGTGCAGGTCTaGCATCTCGGGCACTCGGCC +
Preference number: 2 (lower is better)
Translates to: EPDAAVPGQQWSRLQGEDHAVQV*HLGHSA
Trigger: GGCCGAGTGCCCGAGATGGCAGACCTGCACCGCATG...ATCCTCCCCTTGCAGCCGTGACCACTGCTGTCCAGGAACTGCTGCGTCTGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR-3UTR GCA 90 bp GGTAGCCGCTGTCTCCATCTTGGCACCCAGCACAGGCTCTCCTACCAGGCGGGCAGGGTGAGGACTGGATaGACTCAGCCTGGGCAGGTT +
Preference number: 2 (lower is better)
Translates to: GSRCLHLGTQHRLSYQAGRVRTG*TQPGQV
Trigger: AACCTGCCCAGGCTGAGTGCATCCAGTCCTCACCCT...GCCCGCCTGGTAGGAGAGCCTGTGCTGGGTGCCAAGATGGAGACAGCGGCTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483553.5
ENST00000491994.1
3UTR-3UTR TCA 90 bp CGCTGTCTCCATCTTGGCACCCAGCACAGGCTCTCCTACCAGGCGGGCTGCCCCCGTTCACAGACTCCATaGTGCGTCGCTGGATCATGT +
Preference number: 2 (lower is better)
Translates to: RCLHLGTQHRLSYQAGCPRSQTP*CVAGSC
Trigger: ACATGATCCAGCGACGCATCATGGAGTCTGTGAACG...GGGGCAGCCCGCCTGGTAGGAGAGCCTGTGCTGGGTGCCAAGATGGAGACAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR-3UTR CCA 90 bp CTTCTCCCCATTCACCCGGAGCACCTTGGTGGTGATGGCAGCCATATCTCCTGGCACCAACAGGGGAGGTaGCGTCCACAGGGATGGCCC +
Preference number: 2 (lower is better)
Translates to: LLPIHPEHLGGDGSHISWHQQGR*RPQGWP
Trigger: GGGCCATCCCTGTGGACGCCACCTCCCCTGTTGGTG...CCAGGAGATATGGCTGCCATCACCACCAAGGTGCTCCGGGTGAATGGGGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CAA 90 bp AAGACCTTGACCAGGCCACGGCTGAAGAGCATCTCCACGATCTCCTaGAGGATGGGCAGGATGCCGCTATGGTGCACACCCAGGCCGCGA +
Preference number: 2 (lower is better)
Translates to: KTLTRPRLKSISTIS*RMGRMPLWCTPRPR
Trigger: TCGCGGCCTGGGTGTGCACCATAGCGGCATCCTGCCCATCCTCAAGGAGATCGTGGAGATGCTCTTCAGCCGTGGCCTGGTCAAGGTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CAA 90 bp TCCAGCTTCCGGGCCCGGAGCCCACCCTCTACAACTGACATATCTTaGAGCTGCAGGTCATTGACAGGGTCGAGGGTGGGAGGTCCGGCT +
Preference number: 2 (lower is better)
Translates to: SSFRARSPPSTTDIS*SCRSLTGSRVGGPA
Trigger: AGCCGGACCTCCCACCCTCGACCCTGTCAATGACCTGCAGCTCAAAGATATGTCAGTTGTAGAGGGTGGGCTCCGGGCCCGGAAGCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR-3UTR GCA 90 bp AGTGAGGAGCAACTCATGGCTGCTCATGGCACAAGCCACCCGCCCTGCCAGCTTGTCTTCCAAGCTGCTTaGTCGGGCCAGGGGAGCACT +
Preference number: 2 (lower is better)
Translates to: SEEQLMAAHGTSHPPCQLVFQAA*SGQGST
Trigger: AGTGCTCCCCTGGCCCGAGCAAGCAGCTTGGAAGAC...AAGCTGGCAGGGCGGGTGGCTTGTGCCATGAGCAGCCATGAGTTGCTCCTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CAA 90 bp CGGAGCACCTTGGTGGTGATGGCAGCCATATCTCCTGGCTGGAGCTaGACCACGGTGTGGTCACAAGGCCCTTCAGGCAGGAACAGCTTG +
Preference number: 2 (lower is better)
Translates to: RSTLVVMAAISPGWS*TTVWSQGPSGRNSL
Trigger: CAAGCTGTTCCTGCCTGAAGGGCCTTGTGACCACACCGTGGTCAAGCTCCAGCCAGGAGATATGGCTGCCATCACCACCAAGGTGCTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR-3UTR TCA 90 bp TCAGCTCCTCCAGCTTCCGGGCCCGGAGCCCACCCTCTACAACTGACATATCTTCTCCTGGCTGGAGCTTaGCCACGGTGTGGTCACAAG +
Preference number: 2 (lower is better)
Translates to: SAPPASGPGAHPLQLTYLLLAGA*PRCGHK
Trigger: CTTGTGACCACACCGTGGTCAAGCTCCAGCCAGGAG...AAGATATGTCAGTTGTAGAGGGTGGGCTCCGGGCCCGGAAGCTGGAGGAGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR-3UTR TCA 90 bp AGGCTGGCCGCAAATACGATGTCCCGCCGTAGCAAGGTAGCCGCTGTCTCCATCGTGGGGAAAGTAGGGTaGGGACTGGATGCACTCAGC +
Preference number: 2 (lower is better)
Translates to: RLAANTMSRRSKVAAVSIVGKVG*GLDALS
Trigger: GCTGAGTGCATCCAGTCCTCACCCTACTTTCCCCAC...GATGGAGACAGCGGCTACCTTGCTACGGCGGGACATCGTATTTGCGGCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483553.5
ENST00000491994.1
3UTR-3UTR CCA 90 bp TCTGTGGTCATGATGAGGCAGGAGGCCTCCGGATGCAGCTGTACATCCCCGGTGTGCCCACTGGAAGGCTaGCTGGGGAATGAGGCGATA +
Preference number: 2 (lower is better)
Translates to: SVVMMRQEASGCSCTSPVCPLEG*LGNEAI
Trigger: TATCGCCTCATTCCCCAGCCAGCCTTCCAGTGGGCA...CACCGGGGATGTACAGCTGCATCCGGAGGCCTCCTGCCTCATCATGACCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
3UTR-3UTR CCA 90 bp CCCGGTGAGCAGCCCCACATCCCCGAATGTGTTTCGGAAGTCCCGGAACTTCTGGGCTCAAATGCCCACTaGAAGGCTGGCTGGGGAATG +
Preference number: 2 (lower is better)
Translates to: PGEQPHIPECVSEVPELLGSNAH*KAGWGM
Trigger: CATTCCCCAGCCAGCCTTCCAGTGGGCATTTGAGCC...CAGAAGTTCCGGGACTTCCGAAACACATTCGGGGATGTGGGGCTGCTCACCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
3UTR-3UTR CCA 90 bp GGCAACTGGGCACGTGTGCGGAGGGAGGCCAGGAGGGACAGGTACACTCCGCGGGTTCCAAGTGCAGGATaGCCTGTTTCTGAAACACAT +
Preference number: 2 (lower is better)
Translates to: GNWARVRREARRDRYTPRVPSAG*PVSETH
Trigger: ATGTGTTTCAGAAACAGGCCATCCTGCACTTGGAAC...CCGCGGAGTGTACCTGTCCCTCCTGGCCTCCCTCCGCACACGTGCCCAGTTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR-3UTR CCA 90 bp CCGGACACGTTCTATTCCCTGCTTGAGGGTGTTTGGGAGCTGATCCCCAGCGTCAGGCTCTGGGGCCTCTaGGGTGGATACAGCTGTGGA +
Preference number: 2 (lower is better)
Translates to: PDTFYSLLEGVWELIPSVRLWGL*GGYSCG
Trigger: TCCACAGCTGTATCCACCCCAGAGGCCCCAGAGCCT...GACGCTGGGGATCAGCTCCCAAACACCCTCAAGCAGGGAATAGAACGTGTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR-3UTR CCA 90 bp CTTCTCCCCATTCACCCGGAGCACCTTGGTGGTGATGGCAGCCATATCTCCTGGGGCAGGTCGACCAGTTaGCCAGTCATGTCAGGCTCC +
Preference number: 2 (lower is better)
Translates to: LLPIHPEHLGGDGSHISWGRSTS*PVMSGS
Trigger: GGAGCCTGACATGACTGGCCAACTGGTCGACCTGCC...CCAGGAGATATGGCTGCCATCACCACCAAGGTGCTCCGGGTGAATGGGGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CAA 90 bp ACCGTCTGGTTCAGGCCACAAGCCACCTGGACCTCACCAATCCGCTaGGCCACAGCCCGGACACGTTCTATTCCCTGCTTGAGGGTGTTT +
Preference number: 2 (lower is better)
Translates to: TVWFRPQATWTSPIR*ATARTRSIPCLRVF
Trigger: AAACACCCTCAAGCAGGGAATAGAACGTGTCCGGGCTGTGGCCAAGCGGATTGGTGAGGTCCAGGTGGCTTGTGGCCTGAACCAGACGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
3UTR-3UTR CCA 90 bp GAGAGCAAGGCAGCAATCTCCTCAGGCCGCAGGGTGCTCAGTGCATTGTCAAACCCCTCTGGGACCTCCTaGCTGTCCCACTGCCTCATT +
Preference number: 2 (lower is better)
Translates to: ESKAAISSGRRVLSALSNPSGTS*LSHCLI
Trigger: AATGAGGCAGTGGGACAGCCAGGAGGTCCCAGAGGG...GTTTGACAATGCACTGAGCACCCTGCGGCCTGAGGAGATTGCTGCCTTGCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR-3UTR GCA 90 bp CTGGTTGCTCAGGGCCTTGATGGGCGAAGTGTAGATGGTGCGTGTCATGTGTTTGGGCCAGGGGAGCACTaGAGGGAGAGGCTGAAACAG +
Preference number: 2 (lower is better)
Translates to: LVAQGLDGRSVDGACHVFGPGEH*RERLKQ
Trigger: CTGTTTCAGCCTCTCCCTGCAGTGCTCCCCTGGCCC...AAACACATGACACGCACCATCTACACTTCGCCCATCAAGGCCCTGAGCAACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR-3UTR CCA 90 bp TCTGTGGTCATGATGAGGCAGGAGGCCTCCGGATGCAGCTGTACATCCCCGGTGAAGTCCCGGAACTTCTaGTTGCTCAGGGCCTTGATG +
Preference number: 2 (lower is better)
Translates to: SVVMMRQEASGCSCTSPVKSRNF*LLRALM
Trigger: CATCAAGGCCCTGAGCAACCAGAAGTTCCGGGACTT...CACCGGGGATGTACAGCTGCATCCGGAGGCCTCCTGCCTCATCATGACCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
3UTR-3UTR CCA 90 bp GTAGGATCACTCCCAATGCGTTGTGATGCTCCTGATTCTTCACAACCACCACCCGGCAGGATGCCGCTATaGTGCACACCCAGGCCGCGA +
Preference number: 2 (lower is better)
Translates to: VGSLPMRCDAPDSSQPPPGRMPL*CTPRPR
Trigger: TCGCGGCCTGGGTGTGCACCATAGCGGCATCCTGCC...GGGTGGTGGTTGTGAAGAATCAGGAGCATCACAACGCATTGGGAGTGATCCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CAA 90 bp CTCTTCATCATGTCCTCCACCCTGAGGGCATCCACTCGCAGCAAGTaGAGGATCATAGTGTACGTGAGGCGGAACTGGGACTGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: LFIMSSTLRASTRSK*RIIVYVRRNWDCSW
Trigger: CCAGCTGCAGTCCCAGTTCCGCCTCACGTACACTATGATCCTCAACTTGCTGCGAGTGGATGCCCTCAGGGTGGAGGACATGATGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CAA 90 bp TTGCTGAAGTCCTCCAAGATCTTCTCCCCATTCACCCGGAGCACCTaGGTGGTGATGGCAGCCATATCTCCTGGCTGGAGCTTGACCACG +
Preference number: 2 (lower is better)
Translates to: LLKSSKIFSPFTRST*VVMAAISPGWSLTT
Trigger: CGTGGTCAAGCTCCAGCCAGGAGATATGGCTGCCATCACCACCAAGGTGCTCCGGGTGAATGGGGAGAAGATCTTGGAGGACTTCAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR-3UTR GCA 90 bp TCCCAAACCTCAGGTACTCACCATGCCCCGGGCCCACTCATATACAACCTCAACAGGGTGAGGACTGGATaGACTCAGCCTGGGCAGGTT +
Preference number: 2 (lower is better)
Translates to: SQTSGTHHAPGPLIYNLNRVRTG*TQPGQV
Trigger: AACCTGCCCAGGCTGAGTGCATCCAGTCCTCACCCT...GTTGAGGTTGTATATGAGTGGGCCCGGGGCATGGTGAGTACCTGAGGTTTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483553.5
3UTR-3UTR CCA 90 bp AACAAGACCTTGACCAGGCCACGGCTGAAGAGCATCTCCACGATCTCCTTGAGGGGCTCAAATGCCCACTaGAAGGCTGGCTGGGGAATG +
Preference number: 2 (lower is better)
Translates to: NKTLTRPRLKSISTISLRGSNAH*KAGWGM
Trigger: CATTCCCCAGCCAGCCTTCCAGTGGGCATTTGAGCC...CCTCAAGGAGATCGTGGAGATGCTCTTCAGCCGTGGCCTGGTCAAGGTCTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CAA 90 bp GAGAGCAAGGCAGCAATCTCCTCAGGCCGCAGGGTGCTCAGTGCATaGTCAAACATGAGCTCAGTGAGGAGCAACTCATGGCTGCTCATG +
Preference number: 2 (lower is better)
Translates to: ESKAAISSGRRVLSA*SNMSSVRSNSWLLM
Trigger: CATGAGCAGCCATGAGTTGCTCCTCACTGAGCTCATGTTTGACAATGCACTGAGCACCCTGCGGCCTGAGGAGATTGCTGCCTTGCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
3UTR-3UTR TCA 90 bp GTAGGATCACTCCCAATGCGTTGTGATGCTCCTGATTCTTCACAACCACCACCCTCATGTCCTCCACCCTaGGGGCATCCACTCGCAGCA +
Preference number: 2 (lower is better)
Translates to: VGSLPMRCDAPDSSQPPPSCPPP*GHPLAA
Trigger: TGCTGCGAGTGGATGCCCTCAGGGTGGAGGACATGA...GGGTGGTGGTTGTGAAGAATCAGGAGCATCACAACGCATTGGGAGTGATCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR-3UTR TCA 90 bp CTTCTCCCCATTCACCCGGAGCACCTTGGTGGTGATGGCAGCCATATCTCCTGGACAAGACCAGGGTTGTaGATACTCTGCTGGTGGAGT +
Preference number: 2 (lower is better)
Translates to: LLPIHPEHLGGDGSHISWTRPGL*ILCWWS
Trigger: ACTCCACCAGCAGAGTATTCACAACCCTGGTCTTGT...CCAGGAGATATGGCTGCCATCACCACCAAGGTGCTCCGGGTGAATGGGGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR-3UTR GCA 90 bp ATTGTCAAACATGAGCTCAGTGAGGAGCAACTCATGGCTGCTCATGGCACAAGCCAGGAGGCCTCCGGATaGAGCTGTACATCCCCGGTG +
Preference number: 2 (lower is better)
Translates to: IVKHELSEEQLMAAHGTSQEASG*SCTSPV
Trigger: CACCGGGGATGTACAGCTGCATCCGGAGGCCTCCTG...GCTTGTGCCATGAGCAGCCATGAGTTGCTCCTCACTGAGCTCATGTTTGACAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR-3UTR CCA 90 bp GCTCCATCTCCTTCTGTATCTGCATTCGCTCCCGCAGCTTCAGGTACTGGGCAGAAGTCCCGGAACTTCTaGTTGCTCAGGGCCTTGATG +
Preference number: 2 (lower is better)
Translates to: APSPSVSAFAPAASGTGQKSRNF*LLRALM
Trigger: CATCAAGGCCCTGAGCAACCAGAAGTTCCGGGACTT...CTGCCCAGTACCTGAAGCTGCGGGAGCGAATGCAGATACAGAAGGAGATGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CAA 90 bp ACATACTCCCCAGGGAGCAGGTCCCGGAAGGTGGAGCCATCGTGTTaGCGCATGGAGTCAAACACTACTGTACGAGCAGGCATGTTTACT +
Preference number: 2 (lower is better)
Translates to: TYSPGSRSRKVEPSC*RMESNTTVRAGMFT
Trigger: AGTAAACATGCCTGCTCGTACAGTAGTGTTTGACTCCATGCGCAAACACGATGGCTCCACCTTCCGGGACCTGCTCCCTGGGGAGTATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR-3UTR TCA 90 bp ACCTGGACCTCACCAATCCGCTTGGCCACAGCCCGGACACGTTCTATTCCCTGCAGGATGGCCTGTTTCTaGAACACATCTGGCTCAAAT +
Preference number: 2 (lower is better)
Translates to: TWTSPIRLATARTRSIPCRMACF*NTSGSN
Trigger: ATTTGAGCCAGATGTGTTTCAGAAACAGGCCATCCT...GCAGGGAATAGAACGTGTCCGGGCTGTGGCCAAGCGGATTGGTGAGGTCCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR-3UTR TCA 90 bp GGTGAGCAGCCCCACATCCCCGAATGTGTTTCGGAAGTCCCGGAACTTCTGGTTTTTCCTGCAGATGTGTaGGCTGCGACAAAGACAGAG +
Preference number: 2 (lower is better)
Translates to: GEQPHIPECVSEVPELLVFPADV*AATKTE
Trigger: CTCTGTCTTTGTCGCAGCTCACACATCTGCAGGAAA...AACCAGAAGTTCCGGGACTTCCGAAACACATTCGGGGATGTGGGGCTGCTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
3UTR-3UTR TCA 90 bp ATGGAAGGCTCCTCGGGAGTCCAGCAACAAAAAGAGCTCCCCCTGGGTCTTGGATTTCCTGCAGATGTGTaGGCTGCGACAAAGACAGAG +
Preference number: 2 (lower is better)
Translates to: MEGSSGVQQQKELPLGLGFPADV*AATKTE
Trigger: CTCTGTCTTTGTCGCAGCTCACACATCTGCAGGAAA...TCCAAGACCCAGGGGGAGCTCTTTTTGTTGCTGGACTCCCGAGGAGCCTTCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR-3UTR GCA 90 bp GAGCGAAGGATCTCTGTGGTCATGATGAGGCAGGAGGCCTCCGGATGCAGCTGTACAAAGACAGAGTCATaGCGTTCCAAGTGCAGGATG +
Preference number: 2 (lower is better)
Translates to: ERRISVVMMRQEASGCSCTKTES*RSKCRM
Trigger: CATCCTGCACTTGGAACGGCATGACTCTGTCTTTGT...ACAGCTGCATCCGGAGGCCTCCTGCCTCATCATGACCACAGAGATCCTTCGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
3UTR-3UTR GCA 90 bp TCCCGGAAGGTGGAGCCATCGTGTTTGCGCATGGAGTCAAACACTACTGTACGATCCTGGCTGTCCCACTaGCTCATTCTCATCCTCGTC +
Preference number: 2 (lower is better)
Translates to: SRKVEPSCLRMESNTTVRSWLSH*LILILV
Trigger: GACGAGGATGAGAATGAGGCAGTGGGACAGCCAGGA...TCGTACAGTAGTGTTTGACTCCATGCGCAAACACGATGGCTCCACCTTCCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR-3UTR GCA 90 bp AGCAGCCCCACATCCCCGAATGTGTTTCGGAAGTCCCGGAACTTCTGGTTGCTCTGCAGATGTGTGAGCTaGGACAAAGACAGAGTCATG +
Preference number: 2 (lower is better)
Translates to: SSPTSPNVFRKSRNFWLLCRCVS*DKDRVM
Trigger: CATGACTCTGTCTTTGTCGCAGCTCACACATCTGCA...GAGCAACCAGAAGTTCCGGGACTTCCGAAACACATTCGGGGATGTGGGGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
3UTR-3UTR CCA 90 bp TCAAAGATGACCCACTCCAGGTCCCGAATAACATCTGAGCCACTGTACAGCATGTGCCCACTGGAAGGCTaGCTGGGGAATGAGGCGATA +
Preference number: 2 (lower is better)
Translates to: SKMTHSRSRITSEPLYSMCPLEG*LGNEAI
Trigger: TATCGCCTCATTCCCCAGCCAGCCTTCCAGTGGGCA...CATGCTGTACAGTGGCTCAGATGTTATTCGGGACCTGGAGTGGGTCATCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
3UTR-3UTR CCA 90 bp GAGCGAAGGATCTCTGTGGTCATGATGAGGCAGGAGGCCTCCGGATGCAGCTGTGTTCCAAGTGCAGGATaGCCTGTTTCTGAAACACAT +
Preference number: 2 (lower is better)
Translates to: ERRISVVMMRQEASGCSCVPSAG*PVSETH
Trigger: ATGTGTTTCAGAAACAGGCCATCCTGCACTTGGAAC...ACAGCTGCATCCGGAGGCCTCCTGCCTCATCATGACCACAGAGATCCTTCGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
3UTR-3UTR CCA 90 bp TCATGTTTTTACATGGGGCATTCACTGGGTGTAGAGGCTGGCCGCAAATACGATTGGATGCACTCAGCCTaGGCAGGTTCTCCCCAGCCA +
Preference number: 2 (lower is better)
Translates to: SCFYMGHSLGVEAGRKYDWMHSA*AGSPQP
Trigger: TGGCTGGGGAGAACCTGCCCAGGCTGAGTGCATCCA...ATCGTATTTGCGGCCAGCCTCTACACCCAGTGAATGCCCCATGTAAAAACATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000483553.5
ENST00000491994.1
3UTR-3UTR TCA 90 bp CGAAGGATCTCTGTGGTCATGATGAGGCAGGAGGCCTCCGGATGCAGCTGTACAAGGATGGCCTGTTTCTaGAACACATCTGGCTCAAAT +
Preference number: 2 (lower is better)
Translates to: RRISVVMMRQEASGCSCTRMACF*NTSGSN
Trigger: ATTTGAGCCAGATGTGTTTCAGAAACAGGCCATCCT...TGTACAGCTGCATCCGGAGGCCTCCTGCCTCATCATGACCACAGAGATCCTTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
3UTR-3UTR GCA 90 bp AACAAGACCTTGACCAGGCCACGGCTGAAGAGCATCTCCACGATCTCCTTGAGGTGCAGATGTGTGAGCTaGGACAAAGACAGAGTCATG +
Preference number: 2 (lower is better)
Translates to: NKTLTRPRLKSISTISLRCRCVS*DKDRVM
Trigger: CATGACTCTGTCTTTGTCGCAGCTCACACATCTGCA...CCTCAAGGAGATCGTGGAGATGCTCTTCAGCCGTGGCCTGGTCAAGGTCTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR-3UTR CCA 90 bp TCATGTTTTTACATGGGGCATTCACTGGGTGTAGAGGCTGGCCGCAAATACGATAAACAGTGTCCCCTCTaGGACCTCCTGGCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: SCFYMGHSLGVEAGRKYDKQCPL*DLLAVP
Trigger: TGGGACAGCCAGGAGGTCCCAGAGGGGACACTGTTT...ATCGTATTTGCGGCCAGCCTCTACACCCAGTGAATGCCCCATGTAAAAACATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR-3UTR CCA 90 bp TTATCATCATGTTTTTACATGGGGCATTCACTGGGTGTAGAGGCTGGCCGCAAATGGATGCACTCAGCCTaGGCAGGTTCTCCCCAGCCA +
Preference number: 2 (lower is better)
Translates to: LSSCFYMGHSLGVEAGRKWMHSA*AGSPQP
Trigger: TGGCTGGGGAGAACCTGCCCAGGCTGAGTGCATCCA...TTTGCGGCCAGCCTCTACACCCAGTGAATGCCCCATGTAAAAACATGATGATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000483553.5
ENST00000491994.1
3UTR-3UTR TCA 90 bp GTAGGATCACTCCCAATGCGTTGTGATGCTCCTGATTCTTCACAACCACCACCCGTCCCGAATAACATCTaGGCCACTGTACAGCATGGA +
Preference number: 2 (lower is better)
Translates to: VGSLPMRCDAPDSSQPPPVPNNI*ATVQHG
Trigger: TCCATGCTGTACAGTGGCTCAGATGTTATTCGGGAC...GGGTGGTGGTTGTGAAGAATCAGGAGCATCACAACGCATTGGGAGTGATCCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR-3UTR CCA 90 bp AGCCCACCCTCTACAACTGACATATCTTTGAGCTGCAGGTCATTGACAGGGTCGGGGTGGATACAGCTGTaGACGCTTCCTTCAACACTA +
Preference number: 2 (lower is better)
Translates to: SPPSTTDISLSCRSLTGSGWIQL*TLPSTL
Trigger: TAGTGTTGAAGGAAGCGTCCACAGCTGTATCCACCC...CGACCCTGTCAATGACCTGCAGCTCAAAGATATGTCAGTTGTAGAGGGTGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR-3UTR GCA 90 bp AGCCCACCCTCTACAACTGACATATCTTTGAGCTGCAGGTCATTGACAGGGTCGCTTGGCCTCCACAGCTaGATAGTACCCTTTTGTATG +
Preference number: 2 (lower is better)
Translates to: SPPSTTDISLSCRSLTGSLGLHS*IVPFCM
Trigger: CATACAAAAGGGTACTATGCAGCTGTGGAGGCCAAG...CGACCCTGTCAATGACCTGCAGCTCAAAGATATGTCAGTTGTAGAGGGTGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR-3UTR GCA 90 bp TCATGTTTTTACATGGGGCATTCACTGGGTGTAGAGGCTGGCCGCAAATACGATACAAAGACAGAGTCATaGCGTTCCAAGTGCAGGATG +
Preference number: 2 (lower is better)
Translates to: SCFYMGHSLGVEAGRKYDTKTES*RSKCRM
Trigger: CATCCTGCACTTGGAACGGCATGACTCTGTCTTTGT...ATCGTATTTGCGGCCAGCCTCTACACCCAGTGAATGCCCCATGTAAAAACATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR-3UTR CCA 90 bp TTTATCATCATGTTTTTACATGGGGCATTCACTGGGTGTAGAGGCTGGCCGCAATTTCTGAAACACATCTaGCTCAAATGCCCACTGGAA +
Preference number: 2 (lower is better)
Translates to: FIIMFLHGAFTGCRGWPQFLKHI*LKCPLE
Trigger: TTCCAGTGGGCATTTGAGCCAGATGTGTTTCAGAAA...TTGCGGCCAGCCTCTACACCCAGTGAATGCCCCATGTAAAAACATGATGATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CCA 72 bp CGGCCCCGGGAGAAGGTGAACACCACCACGGGCAACTaGGCACGTGTGCGGAGGGAGGCCAGGAGGGACAGG +
Preference number: 3 (lower is better)
Translates to: RPREKVNTTTGN*ARVRREARRDR
Trigger: CCTGTCCCTCCTGGCCTCCCTCCGCACACGTGCCCAGTTGCCCGTGGTGGTGTTCACCTTCTCCCGGGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR TCA 72 bp CTGAGGCCTGCTCATCACAGCGGCCCCGGGAGAAGGTaGACACCACCACGGGCAACTGGGCACGTGTGCGGA +
Preference number: 3 (lower is better)
Translates to: LRPAHHSGPGRR*TPPRATGHVCG
Trigger: TCCGCACACGTGCCCAGTTGCCCGTGGTGGTGTTCACCTTCTCCCGGGGCCGCTGTGATGAGCAGGCCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CCA 72 bp CAGGTCATTGACAGGGTCGAGGGTGGGAGGTCCGGCTaGGTGGGCCTGAGCCAGACGCAGCAGTTCCTGGAC +
Preference number: 3 (lower is better)
Translates to: QVIDRVEGGRSG*VGLSQTQQFLD
Trigger: GTCCAGGAACTGCTGCGTCTGGCTCAGGCCCACCCAGCCGGACCTCCCACCCTCGACCCTGTCAATGACCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR GCA 72 bp GACTGCAGCTGGGACGGCTTCCCCATCATCATGCGGTaGAGGTCTGCCATCTCGGGCACTCGGCCCTTGCAG +
Preference number: 3 (lower is better)
Translates to: DCSWDGFPIIMR*RSAISGTRPLQ
Trigger: CTGCAAGGGCCGAGTGCCCGAGATGGCAGACCTGCACCGCATGATGATGGGGAAGCCGTCCCAGCTGCAGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR TCA 72 bp GCTATGGTGCACACCCAGGCCGCGATTCAGGAGCTCTaGCATGTGCAGGACCTGGGGCAGCTGGCGGTCAGA +
Preference number: 3 (lower is better)
Translates to: AMVHTQAAIQEL*HVQDLGQLAVR
Trigger: TCTGACCGCCAGCTGCCCCAGGTCCTGCACATGTCAGAGCTCCTGAATCGCGGCCTGGGTGTGCACCATAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR GCA 72 bp GGTCTTCCAAGCTGCTTGCTCGGGCCAGGGGAGCACTaGAGGGAGAGGCTGAAACAGTGTCCCCTCTGGGAC +
Preference number: 3 (lower is better)
Translates to: GLPSCLLGPGEH*RERLKQCPLWD
Trigger: GTCCCAGAGGGGACACTGTTTCAGCCTCTCCCTGCAGTGCTCCCCTGGCCCGAGCAAGCAGCTTGGAAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR GCA 72 bp CTGGGACGGCTTCCCCATCATCATGCGGTGCAGGTCTaGCATCTCGGGCACTCGGCCCTTGCAGAGCAGGAT +
Preference number: 3 (lower is better)
Translates to: LGRLPHHHAVQV*HLGHSALAEQD
Trigger: ATCCTGCTCTGCAAGGGCCGAGTGCCCGAGATGGCAGACCTGCACCGCATGATGATGGGGAAGCCGTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CCA 72 bp CACGAGGTCATCTGGATAGGGCACCTCTGCAGTGGCTaGCCCCCTGTCCTGTGGGTCCTGGGACAAGGGCTT +
Preference number: 3 (lower is better)
Translates to: HEVIWIGHLCSG*PPVLWVLGQGL
Trigger: AAGCCCTTGTCCCAGGACCCACAGGACAGGGGGCCAGCCACTGCAGAGGTGCCCTATCCAGATGACCTCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR GCA 72 bp CTTGAATCCCACGAGGTCATCTGGATAGGGCACCTCTaGAGTGGCTGGCCCCCTGTCCTGTGGGTCCTGGGA +
Preference number: 3 (lower is better)
Translates to: LESHEVIWIGHL*SGWPPVLWVLG
Trigger: TCCCAGGACCCACAGGACAGGGGGCCAGCCACTGCAGAGGTGCCCTATCCAGATGACCTCGTGGGATTCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CCA 72 bp AGAAATCACCAACAGGGGAGGTGGCGTCCACAGGGATaGCCCACTGCTCCTGAGATGGAGGCTCTGGGGCCT +
Preference number: 3 (lower is better)
Translates to: RNHQQGRWRPQG*PTAPEMEALGP
Trigger: AGGCCCCAGAGCCTCCATCTCAGGAGCAGTGGGCCATCCCTGTGGACGCCACCTCCCCTGTTGGTGATTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CCA 72 bp CCGGAGCACCTTGGTGGTGATGGCAGCCATATCTCCTaGCTGGAGCTTGACCACGGTGTGGTCACAAGGCCC +
Preference number: 3 (lower is better)
Translates to: PEHLGGDGSHIS*LELDHGVVTRP
Trigger: GGGCCTTGTGACCACACCGTGGTCAAGCTCCAGCCAGGAGATATGGCTGCCATCACCACCAAGGTGCTCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR-3UTR CAA 90 bp CCCTGCCAACTCGGAGAAGGGCATGCCCCGGGCCCACTCATATACAACCTCAACGCAAACTCAAGGGCGTaGGGGACGGTGGCACTCAGA +
Preference number: 3 (lower is better)
Translates to: PCQLGEGHAPGPLIYNLNANSRA*GTVALR
Trigger: TCTGAGTGCCACCGTCCCCAACGCCCTTGAGTTTGC...GTTGAGGTTGTATATGAGTGGGCCCGGGGCATGCCCTTCTCCGAGTTGGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CCA 72 bp AATTCCTCCACCGTCTGGTTCAGGCCACAAGCCACCTaGACCTCACCAATCCGCTTGGCCACAGCCCGGACA +
Preference number: 3 (lower is better)
Translates to: NSSTVWFRPQAT*TSPIRLATART
Trigger: TGTCCGGGCTGTGGCCAAGCGGATTGGTGAGGTCCAGGTGGCTTGTGGCCTGAACCAGACGGTGGAGGAATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
3UTR GCA 72 bp ACGATCTCCTTGAGGATGGGCAGGATGCCGCTATGGTaGACACCCAGGCCGCGATTCAGGAGCTCTGACATG +
Preference number: 3 (lower is better)
Translates to: TISLRMGRMPLW*TPRPRFRSSDM
Trigger: CATGTCAGAGCTCCTGAATCGCGGCCTGGGTGTGCACCATAGCGGCATCCTGCCCATCCTCAAGGAGATCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CCA 72 bp CAGTCATGTCAGGCTCCTCCAAAGCTCCCAGCCTCTTaGTCAGTTCAGCCAGGGCCTGTTCATGGGCCTTGC +
Preference number: 3 (lower is better)
Translates to: QSCQAPPKLPAS*SVQPGPVHGPC
Trigger: GCAAGGCCCATGAACAGGCCCTGGCTGAACTGACCAAGAGGCTGGGAGCTTTGGAGGAGCCTGACATGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR TCA 72 bp CTGGCTCAAATGCCCACTGGAAGGCTGGCTGGGGAATaGGGCGATAGAAATCACCAACAGGGGAGGTGGCGT +
Preference number: 3 (lower is better)
Translates to: LAQMPTGRLAGE*GDRNHQQGRWR
Trigger: ACGCCACCTCCCCTGTTGGTGATTTCTATCGCCTCATTCCCCAGCCAGCCTTCCAGTGGGCATTTGAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR TCA 72 bp CGGTGTGGTCACAAGGCCCTTCAGGCAGGAACAGCTTaGATCCCACGAGGTCATCTGGATAGGGCACCTCTG +
Preference number: 3 (lower is better)
Translates to: RCGHKALQAGTA*IPRGHLDRAPL
Trigger: CAGAGGTGCCCTATCCAGATGACCTCGTGGGATTCAAGCTGTTCCTGCCTGAAGGGCCTTGTGACCACACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR TCA 72 bp CTCCAGCTTCCGGGCCCGGAGCCCACCCTCTACAACTaGCATATCTTTGAGCTGCAGGTCATTGACAGGGTC +
Preference number: 3 (lower is better)
Translates to: LQLPGPEPTLYN*HIFELQVIDRV
Trigger: GACCCTGTCAATGACCTGCAGCTCAAAGATATGTCAGTTGTAGAGGGTGGGCTCCGGGCCCGGAAGCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR GCA 72 bp CAGGGAGCAGGTCCCGGAAGGTGGAGCCATCGTGTTTaGGCATGGAGTCAAACACTACTGTACGAGCAGGCA +
Preference number: 3 (lower is better)
Translates to: QGAGPGRWSHRV*AWSQTLLYEQA
Trigger: TGCCTGCTCGTACAGTAGTGTTTGACTCCATGCGCAAACACGATGGCTCCACCTTCCGGGACCTGCTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR GCA 72 bp TTGAGGATCATAGTGTACGTGAGGCGGAACTGGGACTaGAGCTGGGACGGCTTCCCCATCATCATGCGGTGC +
Preference number: 3 (lower is better)
Translates to: LRIIVYVRRNWD*SWDGFPIIMRC
Trigger: GCACCGCATGATGATGGGGAAGCCGTCCCAGCTGCAGTCCCAGTTCCGCCTCACGTACACTATGATCCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR GCA 72 bp CGGAGCCCACCCTCTACAACTGACATATCTTTGAGCTaGAGGTCATTGACAGGGTCGAGGGTGGGAGGTCCG +
Preference number: 3 (lower is better)
Translates to: RSPPSTTDISLS*RSLTGSRVGGP
Trigger: CGGACCTCCCACCCTCGACCCTGTCAATGACCTGCAGCTCAAAGATATGTCAGTTGTAGAGGGTGGGCTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR GCA 72 bp AGTAGGAAGCGCAGCCGCTCCATCTCCTTCTGTATCTaGATTCGCTCCCGCAGCTTCAGGTACTGGGCAGGA +
Preference number: 3 (lower is better)
Translates to: SRKRSRSISFCI*IRSRSFRYWAG
Trigger: TCCTGCCCAGTACCTGAAGCTGCGGGAGCGAATGCAGATACAGAAGGAGATGGAGCGGCTGCGCTTCCTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CCA 72 bp GCATTGTCAAACATGAGCTCAGTGAGGAGCAACTCATaGCTGCTCATGGCACAAGCCACCCGCCCTGCCAGC +
Preference number: 3 (lower is better)
Translates to: ALSNMSSVRSNS*LLMAQATRPAS
Trigger: GCTGGCAGGGCGGGTGGCTTGTGCCATGAGCAGCCATGAGTTGCTCCTCACTGAGCTCATGTTTGACAATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
3UTR-3UTR CAA 90 bp CGCATGGAGTCAAACACTACTGTACGAGCAGGCATGTTTACTCCCATGGCAAAGGGTCTTCCAAGCTGCTaGCTCGGGCCAGGGGAGCAC +
Preference number: 3 (lower is better)
Translates to: RMESNTTVRAGMFTPMAKGLPSC*LGPGEH
Trigger: GTGCTCCCCTGGCCCGAGCAAGCAGCTTGGAAGACC...CTTTGCCATGGGAGTAAACATGCCTGCTCGTACAGTAGTGTTTGACTCCATGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR GCA 72 bp CAGACGCAGCAGTTCCTGGACAGCAGTGGTCACGGCTaGAAGGGGAGGATCCTTCTTGAATTTTGGCTGCTG +
Preference number: 3 (lower is better)
Translates to: QTQQFLDSSGHG*KGRILLEFWLL
Trigger: CAGCAGCCAAAATTCAAGAAGGATCCTCCCCTTGCAGCCGTGACCACTGCTGTCCAGGAACTGCTGCGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR GCA 72 bp AGTAGGAAGCGCAGCCGCTCCATCTCCTTCTGTATCTaGATTCGCTCCCGCAGCTTCAGGTACTGCAGAGAG +
Preference number: 3 (lower is better)
Translates to: SRKRSRSISFCI*IRSRSFRYCRE
Trigger: CTCTCTGCAGTACCTGAAGCTGCGGGAGCGAATGCAGATACAGAAGGAGATGGAGCGGCTGCGCTTCCTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483553.5
3UTR CCA 72 bp GCAGCCATATCTCCTGGCTGGAGCTTGACCACGGTGTaGTCACAAGGCCCTTCAGGCAGGAACAGCTTGAAT +
Preference number: 3 (lower is better)
Translates to: AAISPGWSLTTV*SQGPSGRNSLN
Trigger: ATTCAAGCTGTTCCTGCCTGAAGGGCCTTGTGACCACACCGTGGTCAAGCTCCAGCCAGGAGATATGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR GCA 72 bp CAAGGCAGCAATCTCCTCAGGCCGCAGGGTGCTCAGTaGATTGTCAAACATGAGCTCAGTGAGGAGCAACTC +
Preference number: 3 (lower is better)
Translates to: QGSNLLRPQGAQ*IVKHELSEEQL
Trigger: GAGTTGCTCCTCACTGAGCTCATGTTTGACAATGCACTGAGCACCCTGCGGCCTGAGGAGATTGCTGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
3UTR CCA 72 bp AGCAAGTTGAGGATCATAGTGTACGTGAGGCGGAACTaGGACTGCAGCTGGGACGGCTTCCCCATCATCATG +
Preference number: 3 (lower is better)
Translates to: SKLRIIVYVRRN*DCSWDGFPIIM
Trigger: CATGATGATGGGGAAGCCGTCCCAGCTGCAGTCCCAGTTCCGCCTCACGTACACTATGATCCTCAACTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CCA 72 bp CCAAAATTCAGCTCCCCCACAAATTCCTCCACCGTCTaGTTCAGGCCACAAGCCACCTGGACCTCACCAATC +
Preference number: 3 (lower is better)
Translates to: PKFSSPTNSSTV*FRPQATWTSPI
Trigger: GATTGGTGAGGTCCAGGTGGCTTGTGGCCTGAACCAGACGGTGGAGGAATTTGTGGGGGAGCTGAATTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
3UTR-3UTR CAA 90 bp AGCCCACCCTCTACAACTGACATATCTTTGAGCTGCAGGTCATTGACAGGGTCGGTGGCAAACAAGACCTaGACCAGGCCACGGCTGAAG +
Preference number: 3 (lower is better)
Translates to: SPPSTTDISLSCRSLTGSVANKT*TRPRLK
Trigger: CTTCAGCCGTGGCCTGGTCAAGGTCTTGTTTGCCAC...CGACCCTGTCAATGACCTGCAGCTCAAAGATATGTCAGTTGTAGAGGGTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CCA 72 bp GCAGGTCCCGGAAGGTGGAGCCATCGTGTTTGCGCATaGAGTCAAACACTACTGTACGAGCAGGCATGTTTA +
Preference number: 3 (lower is better)
Translates to: AGPGRWSHRVCA*SQTLLYEQACL
Trigger: TAAACATGCCTGCTCGTACAGTAGTGTTTGACTCCATGCGCAAACACGATGGCTCCACCTTCCGGGACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR-3UTR CAA 90 bp AAGACCTTGACCAGGCCACGGCTGAAGAGCATCTCCACGATCTCCTTGAGGATGAAGGTCTGGGCGTGTTaGCTCATTCTCTCCTTCTTG +
Preference number: 3 (lower is better)
Translates to: KTLTRPRLKSISTISLRMKVWAC*LILSFL
Trigger: CAAGAAGGAGAGAATGAGCAAACACGCCCAGACCTT...CATCCTCAAGGAGATCGTGGAGATGCTCTTCAGCCGTGGCCTGGTCAAGGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR TCA 72 bp CCTGGGACAAGGGCTTATCACACAAGACCAGGGTTGTaGATACTCTGCTGGTGGAGTTCGAGGAGACCTGTA +
Preference number: 3 (lower is better)
Translates to: PGTRAYHTRPGL*ILCWWSSRRPV
Trigger: TACAGGTCTCCTCGAACTCCACCAGCAGAGTATTCACAACCCTGGTCTTGTGTGATAAGCCCTTGTCCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR TCA 72 bp ATGCTCCTGATTCTTCACAACCACCACCCTTCCTGCTaGGAGAGACTTCAGCCCGTTCACAGACTCCATGAT +
Preference number: 3 (lower is better)
Translates to: MLLILHNHHPSC*ERLQPVHRLHD
Trigger: ATCATGGAGTCTGTGAACGGGCTGAAGTCTCTCTCAGCAGGAAGGGTGGTGGTTGTGAAGAATCAGGAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CCA 72 bp CGACAAAGACAGAGTCATGCCGTTCCAAGTGCAGGATaGCCTGTTTCTGAAACACATCTGGCTCAAATGCCC +
Preference number: 3 (lower is better)
Translates to: RQRQSHAVPSAG*PVSETHLAQMP
Trigger: GGGCATTTGAGCCAGATGTGTTTCAGAAACAGGCCATCCTGCACTTGGAACGGCATGACTCTGTCTTTGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
3UTR TCA 72 bp ATCAAAGATGACCCACTCCAGGTCCCGAATAACATCTaGGCCACTGTACAGCATGGAGCGAAGGATCTCTGT +
Preference number: 3 (lower is better)
Translates to: IKDDPLQVPNNI*ATVQHGAKDLC
Trigger: ACAGAGATCCTTCGCTCCATGCTGTACAGTGGCTCAGATGTTATTCGGGACCTGGAGTGGGTCATCTTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
3UTR GCA 72 bp TTCAGCCACAACTGTTTTTCCTGCAGATGTGTGAGCTaGGACAAAGACAGAGTCATGCCGTTCCAAGTGCAG +
Preference number: 3 (lower is better)
Translates to: FSHNCFSCRCVS*DKDRVMPFQVQ
Trigger: CTGCACTTGGAACGGCATGACTCTGTCTTTGTCGCAGCTCACACATCTGCAGGAAAAACAGTTGTGGCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
CDS-3UTR GCA 90 bp CCCAGGGCTCTGGCAGACCAGGCCAGAGAGCAAGGCAGCAATCTCCTCAGGCCGCAGGCCCCTCCGCCCTaGCCGGCCTGCCATCTGCAC +
Preference number: 4 (lower is better)
Translates to: PRALADQAREQGSNLLRPQAPPP*PACHLH
Trigger: GTGCAGATGGCAGGCCGGGCAGGGCGGAGGGGCCTG...CGGCCTGAGGAGATTGCTGCCTTGCTCTCTGGCCTGGTCTGCCAGAGCCCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp CGCTGTCTCCATCTTGGCACCCAGCACAGGCTCTCCTACCAGGCGGGCTGCCCCAGGACCTGGGGCAGCTaGCGGTCAGAGCCACGGAGG +
Preference number: 4 (lower is better)
Translates to: RCLHLGTQHRLSYQAGCPRTWGS*RSEPRR
Trigger: CCTCCGTGGCTCTGACCGCCAGCTGCCCCAGGTCCT...GGGGCAGCCCGCCTGGTAGGAGAGCCTGTGCTGGGTGCCAAGATGGAGACAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR GCA 90 bp GCTGTCTCCATCTTGGCACCCAGCACAGGCTCTCCTACCAGGCGGGCTGCCCCCCAGCCAGGCGCTGAATaGAGCGGACCACCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: AVSILAPSTGSPTRRAAPQPGAE*SGPPGP
Trigger: AGGGCCTGGTGGTCCGCTGCATTCAGCGCCTGGCTG...GGGGGCAGCCCGCCTGGTAGGAGAGCCTGTGCTGGGTGCCAAGATGGAGACAGC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000474839.5
ENST00000483553.5
ENST00000491994.1
CDS-3UTR GCA 90 bp TCAGTGAGGAGCAACTCATGGCTGCTCATGGCACAAGCCACCCGCCCTGCCAGCGCTCCCAGTGCCCCGTaGATCCGAGCTCCACGGCCC +
Preference number: 4 (lower is better)
Translates to: SVRSNSWLLMAQATRPASAPSAP*IRAPRP
Trigger: GGGCCGTGGAGCTCGGATGCACGGGGCACTGGGAGC...GCTGGCAGGGCGGGTGGCTTGTGCCATGAGCAGCCATGAGTTGCTCCTCACTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR GCA 90 bp AGGGCTCTGGCAGACCAGGCCAGAGAGCAAGGCAGCAATCTCCTCAGGCCGCAGGTGAGGCCTGAGGCCTaGTCATCACAGCGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: RALADQAREQGSNLLRPQVRPEA*SSQRPR
Trigger: CCGGGGCCGCTGTGATGAGCAGGCCTCAGGCCTCAC...CTGCGGCCTGAGGAGATTGCTGCCTTGCTCTCTGGCCTGGTCTGCCAGAGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR TCA 90 bp CTCTGGCAGACCAGGCCAGAGAGCAAGGCAGCAATCTCCTCAGGCCGCAGGGTGGGCCCCGGGAGAAGGTaGACACCACCACGGGCAACT +
Preference number: 4 (lower is better)
Translates to: LWQTRPESKAAISSGRRVGPGRR*TPPRAT
Trigger: AGTTGCCCGTGGTGGTGTTCACCTTCTCCCGGGGCC...CACCCTGCGGCCTGAGGAGATTGCTGCCTTGCTCTCTGGCCTGGTCTGCCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR TCA 90 bp GCTGTCTCCATCTTGGCACCCAGCACAGGCTCTCCTACCAGGCGGGCTGCCCCCCTCCTGGCTGGAGCTTaGCCACGGTGTGGTCACAAG +
Preference number: 4 (lower is better)
Translates to: AVSILAPSTGSPTRRAAPLLAGA*PRCGHK
Trigger: CTTGTGACCACACCGTGGTCAAGCTCCAGCCAGGAG...GGGGGCAGCCCGCCTGGTAGGAGAGCCTGTGCTGGGTGCCAAGATGGAGACAGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR TCA 90 bp AGGCTGGCCGCAAATACGATGTCCCGCCGTAGCAAGGTAGCCGCTGTCTCCATCCCGGCTGGGTGGGCCTaGGCCAGACGCAGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: RLAANTMSRRSKVAAVSIPAGWA*ARRSSS
Trigger: GGAACTGCTGCGTCTGGCTCAGGCCCACCCAGCCGG...GATGGAGACAGCGGCTACCTTGCTACGGCGGGACATCGTATTTGCGGCCAGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR GCA 90 bp ATGGAGCGAAGGATCTCTGTGGTCATGATGAGGCAGGAGGCCTCCGGATGCAGCGCTCCCAGTGCCCCGTaGATCCGAGCTCCACGGCCC +
Preference number: 4 (lower is better)
Translates to: MERRISVVMMRQEASGCSAPSAP*IRAPRP
Trigger: GGGCCGTGGAGCTCGGATGCACGGGGCACTGGGAGC...GCTGCATCCGGAGGCCTCCTGCCTCATCATGACCACAGAGATCCTTCGCTCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
CDS-3UTR GCA 90 bp GCTCTGGCAGACCAGGCCAGAGAGCAAGGCAGCAATCTCCTCAGGCCGCAGGGTTTCAGCAGCTCCCAGTaGCCCGTGCATCCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: ALADQAREQGSNLLRPQGFSSSQ*PVHPSS
Trigger: GGAGCTCGGATGCACGGGGCACTGGGAGCTGCTGAA...ACCCTGCGGCCTGAGGAGATTGCTGCCTTGCTCTCTGGCCTGGTCTGCCAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR GCA 90 bp ACGATGTCCCGCCGTAGCAAGGTAGCCGCTGTCTCCATCTTGGCACCCAGCACACCGCCCTGCCCGGCCTaGCATCTGCACATACTCCCC +
Preference number: 4 (lower is better)
Translates to: TMSRRSKVAAVSILAPSTPPCPA*HLHILP
Trigger: GGGGAGTATGTGCAGATGGCAGGCCGGGCAGGGCGG...TGTGCTGGGTGCCAAGATGGAGACAGCGGCTACCTTGCTACGGCGGGACATCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp GCTCTGGCAGACCAGGCCAGAGAGCAAGGCAGCAATCTCCTCAGGCCGCAGGGTTACGTGAGGCGGAACTaGGACTGCAGCTGGGACGGC +
Preference number: 4 (lower is better)
Translates to: ALADQAREQGSNLLRPQGYVRRN*DCSWDG
Trigger: GCCGTCCCAGCTGCAGTCCCAGTTCCGCCTCACGTA...ACCCTGCGGCCTGAGGAGATTGCTGCCTTGCTCTCTGGCCTGGTCTGCCAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp AGTGAGGAGCAACTCATGGCTGCTCATGGCACAAGCCACCCGCCCTGCCAGCTTGCGTCCCCAGGGCTCTaGCAGACCAGGCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: SEEQLMAAHGTSHPPCQLASPGL*QTRPES
Trigger: GCTCTCTGGCCTGGTCTGCCAGAGCCCTGGGGACGC...AAGCTGGCAGGGCGGGTGGCTTGTGCCATGAGCAGCCATGAGTTGCTCCTCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR CCA 90 bp CGTAGCAAGGTAGCCGCTGTCTCCATCTTGGCACCCAGCACAGGCTCTCCTACCGCGTCCCCAGGGCTCTaGCAGACCAGGCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: RSKVAAVSILAPSTGSPTASPGL*QTRPES
Trigger: GCTCTCTGGCCTGGTCTGCCAGAGCCCTGGGGACGC...GGTAGGAGAGCCTGTGCTGGGTGCCAAGATGGAGACAGCGGCTACCTTGCTACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000474839.5
ENST00000483553.5
ENST00000491994.1
CDS-3UTR CCA 90 bp CGCTGTCTCCATCTTGGCACCCAGCACAGGCTCTCCTACCAGGCGGGCTGCCCCCTGCTTGAGGGTGTTTaGGAGCTGATCCCCAGCGTC +
Preference number: 4 (lower is better)
Translates to: RCLHLGTQHRLSYQAGCPLLEGV*ELIPSV
Trigger: GACGCTGGGGATCAGCTCCCAAACACCCTCAAGCAG...GGGGCAGCCCGCCTGGTAGGAGAGCCTGTGCTGGGTGCCAAGATGGAGACAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000474839.5
ENST00000483553.5
ENST00000491994.1
3UTR CAA 72 bp ATGTCCCGCCGTAGCAAGGTAGCCGCTGTCTCCATCTaGGCACCCAGCACAGGCTCTCCTACCAGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: MSRRSKVAAVSI*APSTGSPTRRA
Trigger: AGCCCGCCTGGTAGGAGAGCCTGTGCTGGGTGCCAAGATGGAGACAGCGGCTACCTTGCTACGGCGGGACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474839.5
ENST00000483553.5
ENST00000491994.1
CDS-3UTR TCA 90 bp CAGGACCTGGGGCAGCTGGCGGTCAGAGCCACGGAGGCGAGCAAGGCAGCGCTGGTCCCGAATAACATCTaGGCCACTGTACAGCATGGA +
Preference number: 4 (lower is better)
Translates to: QDLGQLAVRATEASKAALVPNNI*ATVQHG
Trigger: TCCATGCTGTACAGTGGCTCAGATGTTATTCGGGAC...CAGCGCTGCCTTGCTCGCCTCCGTGGCTCTGACCGCCAGCTGCCCCAGGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR TCA 90 bp GGTAGCCGCTGTCTCCATCTTGGCACCCAGCACAGGCTCTCCTACCAGGCGGGCGGAGCACCTTGGTGGTaGTGGCAGCCATATCTCCTG +
Preference number: 4 (lower is better)
Translates to: GSRCLHLGTQHRLSYQAGGAPWW*WQPYLL
Trigger: CAGGAGATATGGCTGCCATCACCACCAAGGTGCTCC...GCCCGCCTGGTAGGAGAGCCTGTGCTGGGTGCCAAGATGGAGACAGCGGCTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR TCA 90 bp ACGATGTCCCGCCGTAGCAAGGTAGCCGCTGTCTCCATCTTGGCACCCAGCACAAGGGTGTTTGGGAGCTaGTCCCCAGCGTCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: TMSRRSKVAAVSILAPSTRVFGS*SPASPG
Trigger: CCCTGGGGACGCTGGGGATCAGCTCCCAAACACCCT...TGTGCTGGGTGCCAAGATGGAGACAGCGGCTACCTTGCTACGGCGGGACATCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000474839.5
ENST00000483553.5
ENST00000491994.1
CDS-3UTR GCA 90 bp ACGATGTCCCGCCGTAGCAAGGTAGCCGCTGTCTCCATCTTGGCACCCAGCACACATGCGGTGCAGGTCTaGCATCTCGGGCACTCGGCC +
Preference number: 4 (lower is better)
Translates to: TMSRRSKVAAVSILAPSTHAVQV*HLGHSA
Trigger: GGCCGAGTGCCCGAGATGGCAGACCTGCACCGCATG...TGTGCTGGGTGCCAAGATGGAGACAGCGGCTACCTTGCTACGGCGGGACATCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR GCA 90 bp AGGGCTCTGGCAGACCAGGCCAGAGAGCAAGGCAGCAATCTCCTCAGGCCGCAGCCCATCATCATGCGGTaGAGGTCTGCCATCTCGGGC +
Preference number: 4 (lower is better)
Translates to: RALADQAREQGSNLLRPQPIIMR*RSAISG
Trigger: GCCCGAGATGGCAGACCTGCACCGCATGATGATGGG...CTGCGGCCTGAGGAGATTGCTGCCTTGCTCTCTGGCCTGGTCTGCCAGAGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR GCA 90 bp CAGGACCTGGGGCAGCTGGCGGTCAGAGCCACGGAGGCGAGCAAGGCAGCGCTGATCTCCTTCTGTATCTaGATTCGCTCCCGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QDLGQLAVRATEASKAALISFCI*IRSRSF
Trigger: GAAGCTGCGGGAGCGAATGCAGATACAGAAGGAGAT...CAGCGCTGCCTTGCTCGCCTCCGTGGCTCTGACCGCCAGCTGCCCCAGGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR GCA 90 bp AGTGAGGAGCAACTCATGGCTGCTCATGGCACAAGCCACCCGCCCTGCCAGCTTACAAGCCACCCGCCCTaGCAGCTTCACAGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: SEEQLMAAHGTSHPPCQLTSHPP*QLHSAR
Trigger: GCGGGCACTGTGAAGCTGGCAGGGCGGGTGGCTTGT...AAGCTGGCAGGGCGGGTGGCTTGTGCCATGAGCAGCCATGAGTTGCTCCTCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR GCA 90 bp CGTAGCAAGGTAGCCGCTGTCTCCATCTTGGCACCCAGCACAGGCTCTCCTACCACAAGCCACCCGCCCTaGCAGCTTCACAGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: RSKVAAVSILAPSTGSPTTSHPP*QLHSAR
Trigger: GCGGGCACTGTGAAGCTGGCAGGGCGGGTGGCTTGT...GGTAGGAGAGCCTGTGCTGGGTGCCAAGATGGAGACAGCGGCTACCTTGCTACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474839.5
ENST00000483553.5
ENST00000491994.1
CDS-3UTR GCA 90 bp GGTAGCCGCTGTCTCCATCTTGGCACCCAGCACAGGCTCTCCTACCAGGCGGGCCCCCAGCCAGCCGTCTaGAAAATCCCAAACCTCAGG +
Preference number: 4 (lower is better)
Translates to: GSRCLHLGTQHRLSYQAGPQPAV*KIPNLR
Trigger: CCTGAGGTTTGGGATTTTGCAGACGGCTGGCTGGGG...GCCCGCCTGGTAGGAGAGCCTGTGCTGGGTGCCAAGATGGAGACAGCGGCTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000483553.5
ENST00000491994.1
CDS-3UTR CCA 90 bp GCCACAAGCCACCTGGACCTCACCAATCCGCTTGGCCACAGCCCGGACACGTTCCTGGGGCCTCTGGGGTaGATACAGCTGTGGACGCTT +
Preference number: 4 (lower is better)
Translates to: ATSHLDLTNPLGHSPDTFLGPLG*IQLWTL
Trigger: AAGCGTCCACAGCTGTATCCACCCCAGAGGCCCCAG...GAACGTGTCCGGGCTGTGGCCAAGCGGATTGGTGAGGTCCAGGTGGCTTGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp GGGGCATTCACTGGGTGTAGAGGCTGGCCGCAAATACGATGTCCCGCCGTAGCAACCACCACGGGCAACTaGGCACGTGTGCGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GAFTGCRGWPQIRCPAVATTTGN*ARVRRE
Trigger: CTCCCTCCGCACACGTGCCCAGTTGCCCGTGGTGGT...TGCTACGGCGGGACATCGTATTTGCGGCCAGCCTCTACACCCAGTGAATGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp GCTGTCTCCATCTTGGCACCCAGCACAGGCTCTCCTACCAGGCGGGCTGCCCCCCTGTCCTGTGGGTCCTaGGACAAGGGCTTATCACAC +
Preference number: 4 (lower is better)
Translates to: AVSILAPSTGSPTRRAAPLSCGS*DKGLSH
Trigger: GTGTGATAAGCCCTTGTCCCAGGACCCACAGGACAG...GGGGGCAGCCCGCCTGGTAGGAGAGCCTGTGCTGGGTGCCAAGATGGAGACAGC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR CCA 90 bp AGCCACCTGGACCTCACCAATCCGCTTGGCCACAGCCCGGACACGTTCTATTCCAGGGCACCTCTGCAGTaGCTGGCCCCCTGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: SHLDLTNPLGHSPDTFYSRAPLQ*LAPCPV
Trigger: CACAGGACAGGGGGCCAGCCACTGCAGAGGTGCCCT...GGAATAGAACGTGTCCGGGCTGTGGCCAAGCGGATTGGTGAGGTCCAGGTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR CCA 90 bp GGTAGCCGCTGTCTCCATCTTGGCACCCAGCACAGGCTCTCCTACCAGGCGGGCAGGCCACAAGCCACCTaGACCTCACCAATCCGCTTG +
Preference number: 4 (lower is better)
Translates to: GSRCLHLGTQHRLSYQAGRPQAT*TSPIRL
Trigger: CAAGCGGATTGGTGAGGTCCAGGTGGCTTGTGGCCT...GCCCGCCTGGTAGGAGAGCCTGTGCTGGGTGCCAAGATGGAGACAGCGGCTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474839.5
ENST00000483553.5
ENST00000491994.1
CDS-3UTR CCA 90 bp GTAGCCGCTGTCTCCATCTTGGCACCCAGCACAGGCTCTCCTACCAGGCGGGCTTGGATGCACTCAGCCTaGGCAGGTTCTCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: VAAVSILAPSTGSPTRRAWMHSA*AGSPQP
Trigger: TGGCTGGGGAGAACCTGCCCAGGCTGAGTGCATCCA...AGCCCGCCTGGTAGGAGAGCCTGTGCTGGGTGCCAAGATGGAGACAGCGGCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483553.5
ENST00000491994.1
CDS-3UTR TCA 90 bp CGTAGCAAGGTAGCCGCTGTCTCCATCTTGGCACCCAGCACAGGCTCTCCTACCGGGCTGTGTACACACTaGGCCCCCTGGATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RSKVAAVSILAPSTGSPTGLCTH*APWISS
Trigger: GGAGCTGATCCAGGGGGCTCAGTGTGTACACAGCCC...GGTAGGAGAGCCTGTGCTGGGTGCCAAGATGGAGACAGCGGCTACCTTGCTACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000474839.5
ENST00000483553.5
ENST00000491994.1
CDS-3UTR TCA 90 bp AGGCTGGCCGCAAATACGATGTCCCGCCGTAGCAAGGTAGCCGCTGTCTCCATCGGGCTGTGTACACACTaGGCCCCCTGGATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RLAANTMSRRSKVAAVSIGLCTH*APWISS
Trigger: GGAGCTGATCCAGGGGGCTCAGTGTGTACACAGCCC...GATGGAGACAGCGGCTACCTTGCTACGGCGGGACATCGTATTTGCGGCCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000474839.5
ENST00000483553.5
ENST00000491994.1
CDS-3UTR TCA 90 bp CCGCTTGGCCACAGCCCGGACACGTTCTATTCCCTGCTTGAGGGTGTTTGGGAGATCTCAGCCAGGCGCTaGATGCAGCGGACCACCAGG +
Preference number: 4 (lower is better)
Translates to: PLGHSPDTFYSLLEGVWEISARR*MQRTTR
Trigger: CCTGGTGGTCCGCTGCATTCAGCGCCTGGCTGAGAT...CTCCCAAACACCCTCAAGCAGGGAATAGAACGTGTCCGGGCTGTGGCCAAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR TCA 90 bp TGTGGGGAAAGTAGGGTGAGGACTGGATGCACTCAGCCTGGGCAGGTTCTCCCCATCTCAGCCAGGCGCTaGATGCAGCGGACCACCAGG +
Preference number: 4 (lower is better)
Translates to: CGESRVRTGCTQPGQVLPISARR*MQRTTR
Trigger: CCTGGTGGTCCGCTGCATTCAGCGCCTGGCTGAGAT...GGGGAGAACCTGCCCAGGCTGAGTGCATCCAGTCCTCACCCTACTTTCCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483553.5
ENST00000491994.1
CDS-3UTR TCA 90 bp GTAGCCGCTGTCTCCATCTTGGCACCCAGCACAGGCTCTCCTACCAGGCGGGCTGTGGGGAAAGTAGGGTaGGGACTGGATGCACTCAGC +
Preference number: 4 (lower is better)
Translates to: VAAVSILAPSTGSPTRRAVGKVG*GLDALS
Trigger: GCTGAGTGCATCCAGTCCTCACCCTACTTTCCCCAC...AGCCCGCCTGGTAGGAGAGCCTGTGCTGGGTGCCAAGATGGAGACAGCGGCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483553.5
ENST00000491994.1
CDS-3UTR GCA 90 bp TCCACCGTCTGGTTCAGGCCACAAGCCACCTGGACCTCACCAATCCGCTTGGCCGTCTTCCAAGCTGCTTaGTCGGGCCAGGGGAGCACT +
Preference number: 4 (lower is better)
Translates to: STVWFRPQATWTSPIRLAVFQAA*SGQGST
Trigger: AGTGCTCCCCTGGCCCGAGCAAGCAGCTTGGAAGAC...GGCCAAGCGGATTGGTGAGGTCCAGGTGGCTTGTGGCCTGAACCAGACGGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR GCA 90 bp TCAGTGAGGAGCAACTCATGGCTGCTCATGGCACAAGCCACCCGCCCTGCCAGCCTAGGTCTTCCAAGCTaGTTGCTCGGGCCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: SVRSNSWLLMAQATRPASLGLPS*LLGPGE
Trigger: CTCCCCTGGCCCGAGCAAGCAGCTTGGAAGACCTAG...GCTGGCAGGGCGGGTGGCTTGTGCCATGAGCAGCCATGAGTTGCTCCTCACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR GCA 90 bp CGAAGGATCTCTGTGGTCATGATGAGGCAGGAGGCCTCCGGATGCAGCTGTACAGCAACTGGGCACGTGTaGGGAGGGAGGCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: RRISVVMMRQEASGCSCTATGHV*GGRPGG
Trigger: CCCTCCTGGCCTCCCTCCGCACACGTGCCCAGTTGC...TGTACAGCTGCATCCGGAGGCCTCCTGCCTCATCATGACCACAGAGATCCTTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR GCA 90 bp GCAAATACGATGTCCCGCCGTAGCAAGGTAGCCGCTGTCTCCATCTTGGCACCCAGGCGGAACTGGGACTaGAGCTGGGACGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: ANTMSRRSKVAAVSILAPRRNWD*SWDGFP
Trigger: GGGGAAGCCGTCCCAGCTGCAGTCCCAGTTCCGCCT...GGGTGCCAAGATGGAGACAGCGGCTACCTTGCTACGGCGGGACATCGTATTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR GCA 90 bp GGTAGCCGCTGTCTCCATCTTGGCACCCAGCACAGGCTCTCCTACCAGGCGGGCAGCAGTGGTCACGGCTaGAAGGGGAGGATCCTTCTT +
Preference number: 4 (lower is better)
Translates to: GSRCLHLGTQHRLSYQAGSSGHG*KGRILL
Trigger: AAGAAGGATCCTCCCCTTGCAGCCGTGACCACTGCT...GCCCGCCTGGTAGGAGAGCCTGTGCTGGGTGCCAAGATGGAGACAGCGGCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR GCA 90 bp CGCTGTCTCCATCTTGGCACCCAGCACAGGCTCTCCTACCAGGCGGGCTGCCCCCCGCAGGGTGCTCAGTaGATTGTCAAACATGAGCTC +
Preference number: 4 (lower is better)
Translates to: RCLHLGTQHRLSYQAGCPPQGAQ*IVKHEL
Trigger: GAGCTCATGTTTGACAATGCACTGAGCACCCTGCGG...GGGGCAGCCCGCCTGGTAGGAGAGCCTGTGCTGGGTGCCAAGATGGAGACAGCG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000474839.5
ENST00000483553.5
ENST00000491994.1
CDS-3UTR GCA 90 bp GCTGTCTCCATCTTGGCACCCAGCACAGGCTCTCCTACCAGGCGGGCTGCCCCCCCGCAGGGTGCTCAGTaGATTGTCAAACATGAGCTC +
Preference number: 4 (lower is better)
Translates to: AVSILAPSTGSPTRRAAPPQGAQ*IVKHEL
Trigger: GAGCTCATGTTTGACAATGCACTGAGCACCCTGCGG...GGGGGCAGCCCGCCTGGTAGGAGAGCCTGTGCTGGGTGCCAAGATGGAGACAGC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000474839.5
ENST00000483553.5
ENST00000491994.1
CDS-3UTR GCA 90 bp GTAGCCGCTGTCTCCATCTTGGCACCCAGCACAGGCTCTCCTACCAGGCGGGCTCCCCAGCCAGCCGTCTaGAAAATCCCAAACCTCAGG +
Preference number: 4 (lower is better)
Translates to: VAAVSILAPSTGSPTRRAPQPAV*KIPNLR
Trigger: CCTGAGGTTTGGGATTTTGCAGACGGCTGGCTGGGG...AGCCCGCCTGGTAGGAGAGCCTGTGCTGGGTGCCAAGATGGAGACAGCGGCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483553.5
ENST00000491994.1
CDS-3UTR CCA 90 bp GGTAGCCGCTGTCTCCATCTTGGCACCCAGCACAGGCTCTCCTACCAGGCGGGCCAAACTCAAGGGCGTTaGGGACGGTGGCACTCAGAA +
Preference number: 4 (lower is better)
Translates to: GSRCLHLGTQHRLSYQAGQTQGR*GRWHSE
Trigger: TTCTGAGTGCCACCGTCCCCAACGCCCTTGAGTTTG...GCCCGCCTGGTAGGAGAGCCTGTGCTGGGTGCCAAGATGGAGACAGCGGCTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp CCCACAAATTCCTCCACCGTCTGGTTCAGGCCACAAGCCACCTGGACCTCACCAGGCAGGATGCCGCTATaGTGCACACCCAGGCCGCGA +
Preference number: 4 (lower is better)
Translates to: PTNSSTVWFRPQATWTSPGRMPL*CTPRPR
Trigger: TCGCGGCCTGGGTGTGCACCATAGCGGCATCCTGCC...TGGTGAGGTCCAGGTGGCTTGTGGCCTGAACCAGACGGTGGAGGAATTTGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp AGGGCTCTGGCAGACCAGGCCAGAGAGCAAGGCAGCAATCTCCTCAGGCCGCAGGGCAGCCATATCTCCTaGCTGGAGCTTGACCACGGT +
Preference number: 4 (lower is better)
Translates to: RALADQAREQGSNLLRPQGSHIS*LELDHG
Trigger: ACCGTGGTCAAGCTCCAGCCAGGAGATATGGCTGCC...CTGCGGCCTGAGGAGATTGCTGCCTTGCTCTCTGGCCTGGTCTGCCAGAGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR CCA 90 bp TCCCTGCTTGAGGGTGTTTGGGAGCTGATCCCCAGCGTCCCCAGGGCTCTGGCAAGACGCAGCAGTTCCTaGACAGCAGTGGTCACGGCT +
Preference number: 4 (lower is better)
Translates to: SLLEGVWELIPSVPRALARRSSS*TAVVTA
Trigger: AGCCGTGACCACTGCTGTCCAGGAACTGCTGCGTCT...TGCCAGAGCCCTGGGGACGCTGGGGATCAGCTCCCAAACACCCTCAAGCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR CCA 90 bp CTCTGGCAGACCAGGCCAGAGAGCAAGGCAGCAATCTCCTCAGGCCGCAGGGTGAGGCCACAAGCCACCTaGACCTCACCAATCCGCTTG +
Preference number: 4 (lower is better)
Translates to: LWQTRPESKAAISSGRRVRPQAT*TSPIRL
Trigger: CAAGCGGATTGGTGAGGTCCAGGTGGCTTGTGGCCT...CACCCTGCGGCCTGAGGAGATTGCTGCCTTGCTCTCTGGCCTGGTCTGCCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR TCA 90 bp CTCCTTCTGTATCTGCATTCGCTCCCGCAGCTTCAGGTACTGCAGAGAGCCACCAGGGTGTTTGGGAGCTaGTCCCCAGCGTCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LLLYLHSLPQLQVLQRATRVFGS*SPASPG
Trigger: CCCTGGGGACGCTGGGGATCAGCTCCCAAACACCCT...GGTGGCTCTCTGCAGTACCTGAAGCTGCGGGAGCGAATGCAGATACAGAAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483553.5
CDS-3UTR GCA 90 bp TCAGCTCCTCCAGCTTCCGGGCCCGGAGCCCACCCTCTACAACTGACATATCTTGGGCCAGGGGAGCACTaGAGGGAGAGGCTGAAACAG +
Preference number: 4 (lower is better)
Translates to: SAPPASGPGAHPLQLTYLGPGEH*RERLKQ
Trigger: CTGTTTCAGCCTCTCCCTGCAGTGCTCCCCTGGCCC...AAGATATGTCAGTTGTAGAGGGTGGGCTCCGGGCCCGGAAGCTGGAGGAGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR GCA 90 bp ATGGAGCGAAGGATCTCTGTGGTCATGATGAGGCAGGAGGCCTCCGGATGCAGCCAGGAGGCCTCCGGATaGAGCTGTACATCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: MERRISVVMMRQEASGCSQEASG*SCTSPV
Trigger: CACCGGGGATGTACAGCTGCATCCGGAGGCCTCCTG...GCTGCATCCGGAGGCCTCCTGCCTCATCATGACCACAGAGATCCTTCGCTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
CDS-3UTR GCA 90 bp CGTAGCAAGGTAGCCGCTGTCTCCATCTTGGCACCCAGCACAGGCTCTCCTACCAGGATGCCGCTATGGTaGACACCCAGGCCGCGATTC +
Preference number: 4 (lower is better)
Translates to: RSKVAAVSILAPSTGSPTRMPLW*TPRPRF
Trigger: GAATCGCGGCCTGGGTGTGCACCATAGCGGCATCCT...GGTAGGAGAGCCTGTGCTGGGTGCCAAGATGGAGACAGCGGCTACCTTGCTACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp CCCACAAATTCCTCCACCGTCTGGTTCAGGCCACAAGCCACCTGGACCTCACCACCACTGCTCCTGAGATaGAGGCTCTGGGGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: PTNSSTVWFRPQATWTSPPLLLR*RLWGLW
Trigger: CCAGAGGCCCCAGAGCCTCCATCTCAGGAGCAGTGG...TGGTGAGGTCCAGGTGGCTTGTGGCCTGAACCAGACGGTGGAGGAATTTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp AGGATCTCTGTGGTCATGATGAGGCAGGAGGCCTCCGGATGCAGCTGTACATCCCACCAACAGGGGAGGTaGCGTCCACAGGGATGGCCC +
Preference number: 4 (lower is better)
Translates to: RISVVMMRQEASGCSCTSHQQGR*RPQGWP
Trigger: GGGCCATCCCTGTGGACGCCACCTCCCCTGTTGGTG...GGATGTACAGCTGCATCCGGAGGCCTCCTGCCTCATCATGACCACAGAGATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
CDS-3UTR CCA 90 bp CCCAGGGCTCTGGCAGACCAGGCCAGAGAGCAAGGCAGCAATCTCCTCAGGCCGAAGTCCCGGAACTTCTaGTTGCTCAGGGCCTTGATG +
Preference number: 4 (lower is better)
Translates to: PRALADQAREQGSNLLRPKSRNF*LLRALM
Trigger: CATCAAGGCCCTGAGCAACCAGAAGTTCCGGGACTT...CGGCCTGAGGAGATTGCTGCCTTGCTCTCTGGCCTGGTCTGCCAGAGCCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp CCGCTTGGCCACAGCCCGGACACGTTCTATTCCCTGCTTGAGGGTGTTTGGGAGGATGTGTGGGCTGCTTaGCCCCAAAGGTCTGGGCGT +
Preference number: 4 (lower is better)
Translates to: PLGHSPDTFYSLLEGVWEDVWAA*PQRSGR
Trigger: ACGCCCAGACCTTTGGGGCCAAGCAGCCCACACATC...CTCCCAAACACCCTCAAGCAGGGAATAGAACGTGTCCGGGCTGTGGCCAAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp CTCTGGCAGACCAGGCCAGAGAGCAAGGCAGCAATCTCCTCAGGCCGCAGGGTGCTGTCCTGTGGGTCCTaGGACAAGGGCTTATCACAC +
Preference number: 4 (lower is better)
Translates to: LWQTRPESKAAISSGRRVLSCGS*DKGLSH
Trigger: GTGTGATAAGCCCTTGTCCCAGGACCCACAGGACAG...CACCCTGCGGCCTGAGGAGATTGCTGCCTTGCTCTCTGGCCTGGTCTGCCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR CCA 90 bp CGTAGCAAGGTAGCCGCTGTCTCCATCTTGGCACCCAGCACAGGCTCTCCTACCCGCAGCTTCAGGTACTaGGCAGGAAAACGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RSKVAAVSILAPSTGSPTRSFRY*AGKRGL
Trigger: CAGCCCCCGTTTTCCTGCCCAGTACCTGAAGCTGCG...GGTAGGAGAGCCTGTGCTGGGTGCCAAGATGGAGACAGCGGCTACCTTGCTACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000491994.1
CDS-3UTR CCA 90 bp AGAGAGCAAGGCAGCAATCTCCTCAGGCCGCAGGGTGCTCAGTGCATTGTCAAAGCGTCCCCAGGGCTCTaGCAGACCAGGCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: REQGSNLLRPQGAQCIVKASPGL*QTRPES
Trigger: GCTCTCTGGCCTGGTCTGCCAGAGCCCTGGGGACGC...TTTGACAATGCACTGAGCACCCTGCGGCCTGAGGAGATTGCTGCCTTGCTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
3UTR CAA 72 bp ACCAGGCCACGGCTGAAGAGCATCTCCACGATCTCCTaGAGGATGGGCAGGATGCCGCTATGGTGCACACCC +
Preference number: 4 (lower is better)
Translates to: TRPRLKSISTIS*RMGRMPLWCTP
Trigger: GGGTGTGCACCATAGCGGCATCCTGCCCATCCTCAAGGAGATCGTGGAGATGCTCTTCAGCCGTGGCCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR TCA 90 bp CGAAGGATCTCTGTGGTCATGATGAGGCAGGAGGCCTCCGGATGCAGCTGTACAGGGCTGTGTACACACTaGGCCCCCTGGATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RRISVVMMRQEASGCSCTGLCTH*APWISS
Trigger: GGAGCTGATCCAGGGGGCTCAGTGTGTACACAGCCC...TGTACAGCTGCATCCGGAGGCCTCCTGCCTCATCATGACCACAGAGATCCTTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR TCA 90 bp CTTCTGGTTGCTCAGGGCCTTGATGGGCGAAGTGTAGATGGTGCGTGTCATGTGAGGGTGTTTGGGAGCTaGTCCCCAGCGTCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LLVAQGLDGRSVDGACHVRVFGS*SPASPG
Trigger: CCCTGGGGACGCTGGGGATCAGCTCCCAAACACCCT...CACATGACACGCACCATCTACACTTCGCCCATCAAGGCCCTGAGCAACCAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR GCA 90 bp GGTGAGCAGCCCCACATCCCCGAATGTGTTTCGGAAGTCCCGGAACTTCTGGTTTTCAGCAGCTCCCAGTaGCCCGTGCATCCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: GEQPHIPECVSEVPELLVFSSSQ*PVHPSS
Trigger: GGAGCTCGGATGCACGGGGCACTGGGAGCTGCTGAA...AACCAGAAGTTCCGGGACTTCCGAAACACATTCGGGGATGTGGGGCTGCTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
CDS-3UTR GCA 90 bp AGCCCCACATCCCCGAATGTGTTTCGGAAGTCCCGGAACTTCTGGTTGCTCAGGGAGTGCTCCACACCATaGAGAGGCAGCCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SPTSPNVFRKSRNFWLLRECSTP*RGSQAG
Trigger: CCCAGCCTGGCTGCCTCTGCATGGTGTGGAGCACTC...CCTGAGCAACCAGAAGTTCCGGGACTTCCGAAACACATTCGGGGATGTGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461073.5
CDS-3UTR GCA 90 bp AGCCCCACATCCCCGAATGTGTTTCGGAAGTCCCGGAACTTCTGGTTGCTCAGGCAGGAGGCCTCCGGATaGAGCTGTACATCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: SPTSPNVFRKSRNFWLLRQEASG*SCTSPV
Trigger: CACCGGGGATGTACAGCTGCATCCGGAGGCCTCCTG...CCTGAGCAACCAGAAGTTCCGGGACTTCCGAAACACATTCGGGGATGTGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
CDS-3UTR GCA 90 bp CCCAGGGCTCTGGCAGACCAGGCCAGAGAGCAAGGCAGCAATCTCCTCAGGCCGATCTCCTTCTGTATCTaGATTCGCTCCCGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PRALADQAREQGSNLLRPISFCI*IRSRSF
Trigger: GAAGCTGCGGGAGCGAATGCAGATACAGAAGGAGAT...CGGCCTGAGGAGATTGCTGCCTTGCTCTCTGGCCTGGTCTGCCAGAGCCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR GCA 90 bp ACGATGTCCCGCCGTAGCAAGGTAGCCGCTGTCTCCATCTTGGCACCCAGCACAGGAGCAACTCATGGCTaGTCATGGCACAAGCCACCC +
Preference number: 4 (lower is better)
Translates to: TMSRRSKVAAVSILAPSTGATHG*SWHKPP
Trigger: GGGTGGCTTGTGCCATGAGCAGCCATGAGTTGCTCC...TGTGCTGGGTGCCAAGATGGAGACAGCGGCTACCTTGCTACGGCGGGACATCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474839.5
ENST00000483553.5
ENST00000491994.1
CDS-3UTR GCA 90 bp CACCGTCTGGTTCAGGCCACAAGCCACCTGGACCTCACCAATCCGCTTGGCCACCCTCAGGCCGCAGGGTaGTCAGTGCATTGTCAAACA +
Preference number: 4 (lower is better)
Translates to: HRLVQATSHLDLTNPLGHPQAAG*SVHCQT
Trigger: TGTTTGACAATGCACTGAGCACCCTGCGGCCTGAGG...GTGGCCAAGCGGATTGGTGAGGTCCAGGTGGCTTGTGGCCTGAACCAGACGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR GCA 90 bp AGGCTGGCCGCAAATACGATGTCCCGCCGTAGCAAGGTAGCCGCTGTCTCCATCAGGGTGAGGACTGGATaGACTCAGCCTGGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: RLAANTMSRRSKVAAVSIRVRTG*TQPGQV
Trigger: AACCTGCCCAGGCTGAGTGCATCCAGTCCTCACCCT...GATGGAGACAGCGGCTACCTTGCTACGGCGGGACATCGTATTTGCGGCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483553.5
ENST00000491994.1
CDS-3UTR CCA 90 bp CCCACAAATTCCTCCACCGTCTGGTTCAGGCCACAAGCCACCTGGACCTCACCAAGGCTCTGGGGCCTCTaGGGTGGATACAGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: PTNSSTVWFRPQATWTSPRLWGL*GGYSCG
Trigger: TCCACAGCTGTATCCACCCCAGAGGCCCCAGAGCCT...TGGTGAGGTCCAGGTGGCTTGTGGCCTGAACCAGACGGTGGAGGAATTTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp GAGCGAAGGATCTCTGTGGTCATGATGAGGCAGGAGGCCTCCGGATGCAGCTGTTGGCGTCCACAGGGATaGCCCACTGCTCCTGAGATG +
Preference number: 4 (lower is better)
Translates to: ERRISVVMMRQEASGCSCWRPQG*PTAPEM
Trigger: CATCTCAGGAGCAGTGGGCCATCCCTGTGGACGCCA...ACAGCTGCATCCGGAGGCCTCCTGCCTCATCATGACCACAGAGATCCTTCGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
CDS-3UTR CCA 90 bp CACATCTGGCTCAAATGCCCACTGGAAGGCTGGCTGGGGAATGAGGCGATAGAACACCAACAGGGGAGGTaGCGTCCACAGGGATGGCCC +
Preference number: 4 (lower is better)
Translates to: HIWLKCPLEGWLGNEAIEHQQGR*RPQGWP
Trigger: GGGCCATCCCTGTGGACGCCACCTCCCCTGTTGGTG...TTCTATCGCCTCATTCCCCAGCCAGCCTTCCAGTGGGCATTTGAGCCAGATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
CDS-3UTR CCA 90 bp AGCAGCCCCACATCCCCGAATGTGTTTCGGAAGTCCCGGAACTTCTGGTTGCTCGACATGTGCAGGACCTaGGGCAGCTGGCGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: SSPTSPNVFRKSRNFWLLDMCRT*GSWRSE
Trigger: CTCTGACCGCCAGCTGCCCCAGGTCCTGCACATGTC...GAGCAACCAGAAGTTCCGGGACTTCCGAAACACATTCGGGGATGTGGGGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp GCCGCAAATACGATGTCCCGCCGTAGCAAGGTAGCCGCTGTCTCCATCTTGGCAGCAGGTCCCGGAAGGTaGAGCCATCGTGTTTGCGCA +
Preference number: 4 (lower is better)
Translates to: AANTMSRRSKVAAVSILAAGPGR*SHRVCA
Trigger: TGCGCAAACACGATGGCTCCACCTTCCGGGACCTGC...TGCCAAGATGGAGACAGCGGCTACCTTGCTACGGCGGGACATCGTATTTGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp CCCGGTGAGCAGCCCCACATCCCCGAATGTGTTTCGGAAGTCCCGGAACTTCTGAGCTTGACCACGGTGTaGTCACAAGGCCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: PGEQPHIPECVSEVPELLSLTTV*SQGPSG
Trigger: GCCTGAAGGGCCTTGTGACCACACCGTGGTCAAGCT...CAGAAGTTCCGGGACTTCCGAAACACATTCGGGGATGTGGGGCTGCTCACCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp AGGCTGGCCGCAAATACGATGTCCCGCCGTAGCAAGGTAGCCGCTGTCTCCATCAGGCCACAAGCCACCTaGACCTCACCAATCCGCTTG +
Preference number: 4 (lower is better)
Translates to: RLAANTMSRRSKVAAVSIRPQAT*TSPIRL
Trigger: CAAGCGGATTGGTGAGGTCCAGGTGGCTTGTGGCCT...GATGGAGACAGCGGCTACCTTGCTACGGCGGGACATCGTATTTGCGGCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474839.5
ENST00000483553.5
ENST00000491994.1
CDS-3UTR CCA 90 bp AAGGTAGCCGCTGTCTCCATCTTGGCACCCAGCACAGGCTCTCCTACCAGGCGGACTGGGTGTAGAGGCTaGCCGCAAATACGATGTCCC +
Preference number: 4 (lower is better)
Translates to: KVAAVSILAPSTGSPTRRTGCRG*PQIRCP
Trigger: GGGACATCGTATTTGCGGCCAGCCTCTACACCCAGT...CCGCCTGGTAGGAGAGCCTGTGCTGGGTGCCAAGATGGAGACAGCGGCTACCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474839.5
ENST00000483553.5
ENST00000491994.1
CDS-3UTR CCA 90 bp GCCGCAAATACGATGTCCCGCCGTAGCAAGGTAGCCGCTGTCTCCATCTTGGCATGGATGCACTCAGCCTaGGCAGGTTCTCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: AANTMSRRSKVAAVSILAWMHSA*AGSPQP
Trigger: TGGCTGGGGAGAACCTGCCCAGGCTGAGTGCATCCA...TGCCAAGATGGAGACAGCGGCTACCTTGCTACGGCGGGACATCGTATTTGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483553.5
ENST00000491994.1
3UTR CAA 72 bp CCAGGGAGCAGGTCCCGGAAGGTGGAGCCATCGTGTTaGCGCATGGAGTCAAACACTACTGTACGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: PGSRSRKVEPSC*RMESNTTVRAG
Trigger: GCCTGCTCGTACAGTAGTGTTTGACTCCATGCGCAAACACGATGGCTCCACCTTCCGGGACCTGCTCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CAA 72 bp TTGGTGGTGATGGCAGCCATATCTCCTGGCTGGAGCTaGACCACGGTGTGGTCACAAGGCCCTTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LVVMAAISPGWS*TTVWSQGPSGR
Trigger: CCTGCCTGAAGGGCCTTGTGACCACACCGTGGTCAAGCTCCAGCCAGGAGATATGGCTGCCATCACCACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CAA 72 bp CGGGCCCGGAGCCCACCCTCTACAACTGACATATCTTaGAGCTGCAGGTCATTGACAGGGTCGAGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: RARSPPSTTDIS*SCRSLTGSRVG
Trigger: TCCCACCCTCGACCCTGTCAATGACCTGCAGCTCAAAGATATGTCAGTTGTAGAGGGTGGGCTCCGGGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CAA 72 bp TTCAGGCCACAAGCCACCTGGACCTCACCAATCCGCTaGGCCACAGCCCGGACACGTTCTATTCCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: FRPQATWTSPIR*ATARTRSIPCL
Trigger: CAAGCAGGGAATAGAACGTGTCCGGGCTGTGGCCAAGCGGATTGGTGAGGTCCAGGTGGCTTGTGGCCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR TCA 90 bp AGGATCTCTGTGGTCATGATGAGGCAGGAGGCCTCCGGATGCAGCTGTACATCCTCATGTCCTCCACCCTaGGGGCATCCACTCGCAGCA +
Preference number: 4 (lower is better)
Translates to: RISVVMMRQEASGCSCTSSCPPP*GHPLAA
Trigger: TGCTGCGAGTGGATGCCCTCAGGGTGGAGGACATGA...GGATGTACAGCTGCATCCGGAGGCCTCCTGCCTCATCATGACCACAGAGATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR TCA 90 bp CGCAGCAAGTTGAGGATCATAGTGTACGTGAGGCGGAACTGGGACTGCAGCTGGCTCCTGGCTGGAGCTTaGCCACGGTGTGGTCACAAG +
Preference number: 4 (lower is better)
Translates to: RSKLRIIVYVRRNWDCSWLLAGA*PRCGHK
Trigger: CTTGTGACCACACCGTGGTCAAGCTCCAGCCAGGAG...CCAGCTGCAGTCCCAGTTCCGCCTCACGTACACTATGATCCTCAACTTGCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR TCA 90 bp CCGCTCCATCTCCTTCTGTATCTGCATTCGCTCCCGCAGCTTCAGGTACTGGGCGGAGCACCTTGGTGGTaGTGGCAGCCATATCTCCTG +
Preference number: 4 (lower is better)
Translates to: PLHLLLYLHSLPQLQVLGGAPWW*WQPYLL
Trigger: CAGGAGATATGGCTGCCATCACCACCAAGGTGCTCC...GCCCAGTACCTGAAGCTGCGGGAGCGAATGCAGATACAGAAGGAGATGGAGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR TCA 90 bp GACAAAGACAGAGTCATGCCGTTCCAAGTGCAGGATGGCCTGTTTCTGAAACACCCGGCTGGGTGGGCCTaGGCCAGACGCAGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: DKDRVMPFQVQDGLFLKHPAGWA*ARRSSS
Trigger: GGAACTGCTGCGTCTGGCTCAGGCCCACCCAGCCGG...GTGTTTCAGAAACAGGCCATCCTGCACTTGGAACGGCATGACTCTGTCTTTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR TCA 90 bp GGCTTCCCCATCATCATGCGGTGCAGGTCTGCCATCTCGGGCACTCGGCCCTTGCCCACCCTCTACAACTaGCATATCTTTGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GFPIIMRCRSAISGTRPLPTLYN*HIFELQ
Trigger: CTGCAGCTCAAAGATATGTCAGTTGTAGAGGGTGGG...CAAGGGCCGAGTGCCCGAGATGGCAGACCTGCACCGCATGATGATGGGGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR GCA 90 bp GGTAGCCGCTGTCTCCATCTTGGCACCCAGCACAGGCTCTCCTACCAGGCGGGCACAAAGACAGAGTCATaGCGTTCCAAGTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: GSRCLHLGTQHRLSYQAGTKTES*RSKCRM
Trigger: CATCCTGCACTTGGAACGGCATGACTCTGTCTTTGT...GCCCGCCTGGTAGGAGAGCCTGTGCTGGGTGCCAAGATGGAGACAGCGGCTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR GCA 90 bp CCGGACACGTTCTATTCCCTGCTTGAGGGTGTTTGGGAGCTGATCCCCAGCGTCGGAGCAACTCATGGCTaGTCATGGCACAAGCCACCC +
Preference number: 4 (lower is better)
Translates to: PDTFYSLLEGVWELIPSVGATHG*SWHKPP
Trigger: GGGTGGCTTGTGCCATGAGCAGCCATGAGTTGCTCC...GACGCTGGGGATCAGCTCCCAAACACCCTCAAGCAGGGAATAGAACGTGTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR GCA 90 bp AGCCCAAAATTCAGCTCCCCCACAAATTCCTCCACCGTCTGGTTCAGGCCACAACAGCCAGGCGCTGAATaGAGCGGACCACCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: SPKFSSPTNSSTVWFRPQQPGAE*SGPPGP
Trigger: AGGGCCTGGTGGTCCGCTGCATTCAGCGCCTGGCTG...TTGTGGCCTGAACCAGACGGTGGAGGAATTTGTGGGGGAGCTGAATTTTGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR CCA 90 bp AGCCCCACATCCCCGAATGTGTTTCGGAAGTCCCGGAACTTCTGGTTGCTCAGGAGGCTCTGGGGCCTCTaGGGTGGATACAGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: SPTSPNVFRKSRNFWLLRRLWGL*GGYSCG
Trigger: TCCACAGCTGTATCCACCCCAGAGGCCCCAGAGCCT...CCTGAGCAACCAGAAGTTCCGGGACTTCCGAAACACATTCGGGGATGTGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
CDS-3UTR CCA 90 bp CCGGACACGTTCTATTCCCTGCTTGAGGGTGTTTGGGAGCTGATCCCCAGCGTCTGCCCACTGGAAGGCTaGCTGGGGAATGAGGCGATA +
Preference number: 4 (lower is better)
Translates to: PDTFYSLLEGVWELIPSVCPLEG*LGNEAI
Trigger: TATCGCCTCATTCCCCAGCCAGCCTTCCAGTGGGCA...GACGCTGGGGATCAGCTCCCAAACACCCTCAAGCAGGGAATAGAACGTGTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp CCGTCTGGTTCAGGCCACAAGCCACCTGGACCTCACCAATCCGCTTGGCCACAGAAAAAGAGCTCCCCCTaGGTCTTGGAGCTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: PSGSGHKPPGPHQSAWPQKKSSP*VLELFP
Trigger: AGGGAACAGCTCCAAGACCCAGGGGGAGCTCTTTTT...CTGTGGCCAAGCGGATTGGTGAGGTCCAGGTGGCTTGTGGCCTGAACCAGACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp TCAGCTCCTCCAGCTTCCGGGCCCGGAGCCCACCCTCTACAACTGACATATCTTAGACGCAGCAGTTCCTaGACAGCAGTGGTCACGGCT +
Preference number: 4 (lower is better)
Translates to: SAPPASGPGAHPLQLTYLRRSSS*TAVVTA
Trigger: AGCCGTGACCACTGCTGTCCAGGAACTGCTGCGTCT...AAGATATGTCAGTTGTAGAGGGTGGGCTCCGGGCCCGGAAGCTGGAGGAGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp GCAAATACGATGTCCCGCCGTAGCAAGGTAGCCGCTGTCTCCATCTTGGCACCCCTGCTTGAGGGTGTTTaGGAGCTGATCCCCAGCGTC +
Preference number: 4 (lower is better)
Translates to: ANTMSRRSKVAAVSILAPLLEGV*ELIPSV
Trigger: GACGCTGGGGATCAGCTCCCAAACACCCTCAAGCAG...GGGTGCCAAGATGGAGACAGCGGCTACCTTGCTACGGCGGGACATCGTATTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000474839.5
ENST00000483553.5
ENST00000491994.1
CDS-3UTR CCA 90 bp TGTGGGGAAAGTAGGGTGAGGACTGGATGCACTCAGCCTGGGCAGGTTCTCCCCACTGGGTGTAGAGGCTaGCCGCAAATACGATGTCCC +
Preference number: 4 (lower is better)
Translates to: CGESRVRTGCTQPGQVLPTGCRG*PQIRCP
Trigger: GGGACATCGTATTTGCGGCCAGCCTCTACACCCAGT...GGGGAGAACCTGCCCAGGCTGAGTGCATCCAGTCCTCACCCTACTTTCCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483553.5
ENST00000491994.1
CDS-3UTR TCA 90 bp AGGATCTCTGTGGTCATGATGAGGCAGGAGGCCTCCGGATGCAGCTGTACATCCCTGCCATTTTCGGGCTaGGTGCTCCACACCATGCAG +
Preference number: 4 (lower is better)
Translates to: RISVVMMRQEASGCSCTSLPFSG*VLHTMQ
Trigger: CTGCATGGTGTGGAGCACTCAGCCCGAAAATGGCAG...GGATGTACAGCTGCATCCGGAGGCCTCCTGCCTCATCATGACCACAGAGATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461073.5
CDS-3UTR TCA 90 bp TCTGTGGTCATGATGAGGCAGGAGGCCTCCGGATGCAGCTGTACATCCCCGGTGAGGCTGGCTGGGGAATaGGGCGATAGAAATCACCAA +
Preference number: 4 (lower is better)
Translates to: SVVMMRQEASGCSCTSPVRLAGE*GDRNHQ
Trigger: TTGGTGATTTCTATCGCCTCATTCCCCAGCCAGCCT...CACCGGGGATGTACAGCTGCATCCGGAGGCCTCCTGCCTCATCATGACCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
CDS-3UTR TCA 90 bp CCCGGTGAGCAGCCCCACATCCCCGAATGTGTTTCGGAAGTCCCGGAACTTCTGGAACCTCATCAAAGATaGCCCACTCCAGGTCCCGAA +
Preference number: 4 (lower is better)
Translates to: PGEQPHIPECVSEVPELLEPHQR*PTPGPE
Trigger: TTCGGGACCTGGAGTGGGTCATCTTTGATGAGGTTC...CAGAAGTTCCGGGACTTCCGAAACACATTCGGGGATGTGGGGCTGCTCACCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
CDS-3UTR TCA 90 bp CCGGACACGTTCTATTCCCTGCTTGAGGGTGTTTGGGAGCTGATCCCCAGCGTCCAGGCAGGAACAGCTTaGATCCCACGAGGTCATCTG +
Preference number: 4 (lower is better)
Translates to: PDTFYSLLEGVWELIPSVQAGTA*IPRGHL
Trigger: CAGATGACCTCGTGGGATTCAAGCTGTTCCTGCCTG...GACGCTGGGGATCAGCTCCCAAACACCCTCAAGCAGGGAATAGAACGTGTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR TCA 90 bp ACCTGGACCTCACCAATCCGCTTGGCCACAGCCCGGACACGTTCTATTCCCTGCGCTGCTGCCTCTTGCTaGAGTCCTCCAAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: TWTSPIRLATARTRSIPCAAASC*SPPRSS
Trigger: AGAAGATCTTGGAGGACTTCAGCAAGAGGCAGCAGC...GCAGGGAATAGAACGTGTCCGGGCTGTGGCCAAGCGGATTGGTGAGGTCCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR TCA 90 bp TCTGTGGTCATGATGAGGCAGGAGGCCTCCGGATGCAGCTGTACATCCCCGGTGGGGGAGGATCCTTCTTaGATTTTGGCTGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: SVVMMRQEASGCSCTSPVGEDPS*ILAAAS
Trigger: AGAGGCAGCAGCCAAAATTCAAGAAGGATCCTCCCC...CACCGGGGATGTACAGCTGCATCCGGAGGCCTCCTGCCTCATCATGACCACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR TCA 90 bp GCAAATACGATGTCCCGCCGTAGCAAGGTAGCCGCTGTCTCCATCTTGGCACCCAGCAGCAGCAATGACTaGTCCGACAGTAGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: ANTMSRRSKVAAVSILAPSSSND*SDSRKR
Trigger: GCGCTTCCTACTGTCGGATCAGTCATTGCTGCTGCT...GGGTGCCAAGATGGAGACAGCGGCTACCTTGCTACGGCGGGACATCGTATTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474839.5
ENST00000483553.5
ENST00000491994.1
CDS-3UTR GCA 90 bp ATGGAGCGAAGGATCTCTGTGGTCATGATGAGGCAGGAGGCCTCCGGATGCAGCGGATCCGTCTTCCTCTaGCATTTTCGGGCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: MERRISVVMMRQEASGCSGSVFL*HFRAEC
Trigger: GCACTCAGCCCGAAAATGGCAGAGGAAGACGGATCC...GCTGCATCCGGAGGCCTCCTGCCTCATCATGACCACAGAGATCCTTCGCTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461073.5
CDS-3UTR GCA 90 bp AGGGCTCTGGCAGACCAGGCCAGAGAGCAAGGCAGCAATCTCCTCAGGCCGCAGCTTGGCCTCCACAGCTaGATAGTACCCTTTTGTATG +
Preference number: 4 (lower is better)
Translates to: RALADQAREQGSNLLRPQLGLHS*IVPFCM
Trigger: CATACAAAAGGGTACTATGCAGCTGTGGAGGCCAAG...CTGCGGCCTGAGGAGATTGCTGCCTTGCTCTCTGGCCTGGTCTGCCAGAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR GCA 90 bp TCCACCGTCTGGTTCAGGCCACAAGCCACCTGGACCTCACCAATCCGCTTGGCCAGGTCTGGGCGTGTTTaGTCATTCTCTCCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: STVWFRPQATWTSPIRLARSGRV*SFSPSW
Trigger: CCAAGAAGGAGAGAATGAGCAAACACGCCCAGACCT...GGCCAAGCGGATTGGTGAGGTCCAGGTGGCTTGTGGCCTGAACCAGACGGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR GCA 90 bp GAGCGAAGGATCTCTGTGGTCATGATGAGGCAGGAGGCCTCCGGATGCAGCTGTGCTTCCCCATCATCATaGGGTGCAGGTCTGCCATCT +
Preference number: 4 (lower is better)
Translates to: ERRISVVMMRQEASGCSCASPSS*GAGLPS
Trigger: AGATGGCAGACCTGCACCGCATGATGATGGGGAAGC...ACAGCTGCATCCGGAGGCCTCCTGCCTCATCATGACCACAGAGATCCTTCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR GCA 90 bp CTGTTTCTGAAACACATCTGGCTCAAATGCCCACTGGAAGGCTGGCTGGGGAATCAGCCAGGCGCTGAATaGAGCGGACCACCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LFLKHIWLKCPLEGWLGNQPGAE*SGPPGP
Trigger: AGGGCCTGGTGGTCCGCTGCATTCAGCGCCTGGCTG...ATTCCCCAGCCAGCCTTCCAGTGGGCATTTGAGCCAGATGTGTTTCAGAAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR GCA 90 bp CCGGACACGTTCTATTCCCTGCTTGAGGGTGTTTGGGAGCTGATCCCCAGCGTCCTCAGGTACTCACCATaGCCCGGGCCCACTCATATA +
Preference number: 4 (lower is better)
Translates to: PDTFYSLLEGVWELIPSVLRYSP*PGPTHI
Trigger: TATATGAGTGGGCCCGGGGCATGGTGAGTACCTGAG...GACGCTGGGGATCAGCTCCCAAACACCCTCAAGCAGGGAATAGAACGTGTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483553.5
CDS-3UTR GCA 90 bp TACATGGGGCATTCACTGGGTGTAGAGGCTGGCCGCAAATACGATGTCCCGCCGCTCAGGTACTCACCATaGCCCGGGCCCACTCATATA +
Preference number: 4 (lower is better)
Translates to: YMGHSLGVEAGRKYDVPPLRYSP*PGPTHI
Trigger: TATATGAGTGGGCCCGGGGCATGGTGAGTACCTGAG...CGGCGGGACATCGTATTTGCGGCCAGCCTCTACACCCAGTGAATGCCCCATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483553.5
ENST00000491994.1
CDS-3UTR GCA 90 bp GGCAGCAATCTCCTCAGGCCGCAGGGTGCTCAGTGCATTGTCAAACATGAGCTCAGGGTGAGGACTGGATaGACTCAGCCTGGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: GSNLLRPQGAQCIVKHELRVRTG*TQPGQV
Trigger: AACCTGCCCAGGCTGAGTGCATCCAGTCCTCACCCT...GAGCTCATGTTTGACAATGCACTGAGCACCCTGCGGCCTGAGGAGATTGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483553.5
CDS-3UTR CCA 90 bp AGCAGCCCCACATCCCCGAATGTGTTTCGGAAGTCCCGGAACTTCTGGTTGCTCGTGGTTGGGTGTCTTTaGGCCTGTAGGTCGGATGGG +
Preference number: 4 (lower is better)
Translates to: SSPTSPNVFRKSRNFWLLVVGCL*ACRSDG
Trigger: CCCATCCGACCTACAGGCCCAAAGACACCCAACCAC...GAGCAACCAGAAGTTCCGGGACTTCCGAAACACATTCGGGGATGTGGGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461073.5
CDS-3UTR CCA 90 bp AAGTTGAGGATCATAGTGTACGTGAGGCGGAACTGGGACTGCAGCTGGGACGGCAAACAGTGTCCCCTCTaGGACCTCCTGGCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: KLRIIVYVRRNWDCSWDGKQCPL*DLLAVP
Trigger: TGGGACAGCCAGGAGGTCCCAGAGGGGACACTGTTT...GCCGTCCCAGCTGCAGTCCCAGTTCCGCCTCACGTACACTATGATCCTCAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp AGCTGCGACAAAGACAGAGTCATGCCGTTCCAAGTGCAGGATGGCCTGTTTCTGCCACTGCTCCTGAGATaGAGGCTCTGGGGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SCDKDRVMPFQVQDGLFLPLLLR*RLWGLW
Trigger: CCAGAGGCCCCAGAGCCTCCATCTCAGGAGCAGTGG...CAGAAACAGGCCATCCTGCACTTGGAACGGCATGACTCTGTCTTTGTCGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
CDS-3UTR CCA 90 bp AAGACCTTGACCAGGCCACGGCTGAAGAGCATCTCCACGATCTCCTTGAGGATGGGCAGGTCGACCAGTTaGCCAGTCATGTCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: KTLTRPRLKSISTISLRMGRSTS*PVMSGS
Trigger: GGAGCCTGACATGACTGGCCAACTGGTCGACCTGCC...CATCCTCAAGGAGATCGTGGAGATGCTCTTCAGCCGTGGCCTGGTCAAGGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp CTTCTCCCCATTCACCCGGAGCACCTTGGTGGTGATGGCAGCCATATCTCCTGGAATTCCTCCACCGTCTaGTTCAGGCCACAAGCCACC +
Preference number: 4 (lower is better)
Translates to: LLPIHPEHLGGDGSHISWNSSTV*FRPQAT
Trigger: GGTGGCTTGTGGCCTGAACCAGACGGTGGAGGAATT...CCAGGAGATATGGCTGCCATCACCACCAAGGTGCTCCGGGTGAATGGGGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp GCCGCAAATACGATGTCCCGCCGTAGCAAGGTAGCCGCTGTCTCCATCTTGGCAAATTCCTCCACCGTCTaGTTCAGGCCACAAGCCACC +
Preference number: 4 (lower is better)
Translates to: AANTMSRRSKVAAVSILANSSTV*FRPQAT
Trigger: GGTGGCTTGTGGCCTGAACCAGACGGTGGAGGAATT...TGCCAAGATGGAGACAGCGGCTACCTTGCTACGGCGGGACATCGTATTTGCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474839.5
ENST00000483553.5
ENST00000491994.1
3UTR CAA 72 bp TCCTCCAAGATCTTCTCCCCATTCACCCGGAGCACCTaGGTGGTGATGGCAGCCATATCTCCTGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SSKIFSPFTRST*VVMAAISPGWS
Trigger: GCTCCAGCCAGGAGATATGGCTGCCATCACCACCAAGGTGCTCCGGGTGAATGGGGAGAAGATCTTGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CAA 72 bp CCCTCTACAACTGACATATCTTTGAGCTGCAGGTCATaGACAGGGTCGAGGGTGGGAGGTCCGGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PSTTDISLSCRS*TGSRVGGPAGW
Trigger: CCACCCAGCCGGACCTCCCACCCTCGACCCTGTCAATGACCTGCAGCTCAAAGATATGTCAGTTGTAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR TCA 90 bp TCTGTGGTCATGATGAGGCAGGAGGCCTCCGGATGCAGCTGTACATCCCCGGTGGGCCAGAAGGGATACTaGGTTGGATTTCCCCATAAG +
Preference number: 4 (lower is better)
Translates to: SVVMMRQEASGCSCTSPVGQKGY*VGFPHK
Trigger: CTTATGGGGAAATCCAACTCAGTATCCCTTCTGGCC...CACCGGGGATGTACAGCTGCATCCGGAGGCCTCCTGCCTCATCATGACCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461073.5
CDS-3UTR TCA 90 bp AGGATCTCTGTGGTCATGATGAGGCAGGAGGCCTCCGGATGCAGCTGTACATCCAGCAGCAGCAATGACTaGTCCGACAGTAGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: RISVVMMRQEASGCSCTSSSSND*SDSRKR
Trigger: GCGCTTCCTACTGTCGGATCAGTCATTGCTGCTGCT...GGATGTACAGCTGCATCCGGAGGCCTCCTGCCTCATCATGACCACAGAGATCCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR TCA 90 bp GGGGCATTCACTGGGTGTAGAGGCTGGCCGCAAATACGATGTCCCGCCGTAGCAGTTCTATTCCCTGCTTaGGGGTGTTTGGGAGCTGAT +
Preference number: 4 (lower is better)
Translates to: GAFTGCRGWPQIRCPAVAVLFPA*GCLGAD
Trigger: ATCAGCTCCCAAACACCCTCAAGCAGGGAATAGAAC...TGCTACGGCGGGACATCGTATTTGCGGCCAGCCTCTACACCCAGTGAATGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000474839.5
ENST00000483553.5
ENST00000491994.1
CDS-3UTR TCA 90 bp AGAGAGCAAGGCAGCAATCTCCTCAGGCCGCAGGGTGCTCAGTGCATTGTCAAAGTGGGGAAAGTAGGGTaGGGACTGGATGCACTCAGC +
Preference number: 4 (lower is better)
Translates to: REQGSNLLRPQGAQCIVKVGKVG*GLDALS
Trigger: GCTGAGTGCATCCAGTCCTCACCCTACTTTCCCCAC...TTTGACAATGCACTGAGCACCCTGCGGCCTGAGGAGATTGCTGCCTTGCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483553.5
CDS-3UTR GCA 90 bp CCCGGTGAGCAGCCCCACATCCCCGAATGTGTTTCGGAAGTCCCGGAACTTCTGTGTTCTGCTTCTTGCTaGAGATCTGGGGCACAAGGA +
Preference number: 4 (lower is better)
Translates to: PGEQPHIPECVSEVPELLCSASC*RSGAQG
Trigger: TCCTTGTGCCCCAGATCTGCAGCAAGAAGCAGAACA...CAGAAGTTCCGGGACTTCCGAAACACATTCGGGGATGTGGGGCTGCTCACCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461073.5
CDS-3UTR GCA 90 bp AAGATAGTGCTCCAGGGGCACGGGGCGGGTTACAGTGCTAATCACATAGATCTGCGAGCAAGGCAGCGCTaGAGGAAGAGGTGGATCTCG +
Preference number: 4 (lower is better)
Translates to: KIVLQGHGAGYSANHIDLRARQR*RKRWIS
Trigger: CGAGATCCACCTCTTCCTGCAGCGCTGCCTTGCTCG...CAGATCTATGTGATTAGCACTGTAACCCGCCCCGTGCCCCTGGAGCACTATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR GCA 90 bp GAGCCAGACGCAGCAGTTCCTGGACAGCAGTGGTCACGGCTGCAAGGGGAGGATTGGAGCCATCGTGTTTaGGCATGGAGTCAAACACTA +
Preference number: 4 (lower is better)
Translates to: EPDAAVPGQQWSRLQGEDWSHRV*AWSQTL
Trigger: TAGTGTTTGACTCCATGCGCAAACACGATGGCTCCA...ATCCTCCCCTTGCAGCCGTGACCACTGCTGTCCAGGAACTGCTGCGTCTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR GCA 90 bp CGAAGGATCTCTGTGGTCATGATGAGGCAGGAGGCCTCCGGATGCAGCTGTACACCTGTTCATGGGCCTTaGTGTCTTTGCGGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: RRISVVMMRQEASGCSCTPVHGP*CLCGRE
Trigger: TTCCCTCCCGCAAAGACAGCAAGGCCCATGAACAGG...TGTACAGCTGCATCCGGAGGCCTCCTGCCTCATCATGACCACAGAGATCCTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR GCA 90 bp ATGGAAGGCTCCTCGGGAGTCCAGCAACAAAAAGAGCTCCCCCTGGGTCTTGGACGTCGCTGGATCATGTaGTGGGTCTCTGTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: MEGSSGVQQQKELPLGLGRRWIM*WVSVSS
Trigger: GGAACTGACAGAGACCCAGCACATGATCCAGCGACG...TCCAAGACCCAGGGGGAGCTCTTTTTGTTGCTGGACTCCCGAGGAGCCTTCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR GCA 90 bp ATTGTCAAACATGAGCTCAGTGAGGAGCAACTCATGGCTGCTCATGGCACAAGCACAAGCCACCCGCCCTaGCAGCTTCACAGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: IVKHELSEEQLMAAHGTSTSHPP*QLHSAR
Trigger: GCGGGCACTGTGAAGCTGGCAGGGCGGGTGGCTTGT...GCTTGTGCCATGAGCAGCCATGAGTTGCTCCTCACTGAGCTCATGTTTGACAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR GCA 90 bp TACATGGGGCATTCACTGGGTGTAGAGGCTGGCCGCAAATACGATGTCCCGCCGCCGCAGGGTGCTCAGTaGATTGTCAAACATGAGCTC +
Preference number: 4 (lower is better)
Translates to: YMGHSLGVEAGRKYDVPPPQGAQ*IVKHEL
Trigger: GAGCTCATGTTTGACAATGCACTGAGCACCCTGCGG...CGGCGGGACATCGTATTTGCGGCCAGCCTCTACACCCAGTGAATGCCCCATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000474839.5
ENST00000483553.5
ENST00000491994.1
CDS-3UTR CCA 90 bp AGCCCCACATCCCCGAATGTGTTTCGGAAGTCCCGGAACTTCTGGTTGCTCAGGGGGAAGGCTACTCTCTaGAGCTCCAGGCAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: SPTSPNVFRKSRNFWLLRGKATL*SSRQVQ
Trigger: CTGAACTTGCCTGGAGCTCCAGAGAGTAGCCTTCCC...CCTGAGCAACCAGAAGTTCCGGGACTTCCGAAACACATTCGGGGATGTGGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461073.5
CDS-3UTR CCA 90 bp GCTCAGGGCCTTGATGGGCGAAGTGTAGATGGTGCGTGTCATGTGTTTCTGGGCCCAGTATCTGGCCTGTaGTTGGGTGTCTTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: AQGLDGRSVDGACHVFLGPVSGL*LGVFGP
Trigger: AGGCCCAAAGACACCCAACCACAGGCCAGATACTGG...GCCCAGAAACACATGACACGCACCATCTACACTTCGCCCATCAAGGCCCTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461073.5
CDS-3UTR CCA 90 bp CGACAAAGACAGAGTCATGCCGTTCCAAGTGCAGGATGGCCTGTTTCTGAAACACTGGGAGGCTGGCCCTaGAGGCCGGCGAAGAGACAA +
Preference number: 4 (lower is better)
Translates to: RQRQSHAVPSAGWPVSETLGGWP*RPAKRQ
Trigger: TTGTCTCTTCGCCGGCCTCCAGGGCCAGCCTCCCAG...TGTTTCAGAAACAGGCCATCCTGCACTTGGAACGGCATGACTCTGTCTTTGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461073.5
CDS-3UTR CCA 90 bp CTGGTTGCTCAGGGCCTTGATGGGCGAAGTGTAGATGGTGCGTGTCATGTGTTTCTGGGGCCTCTGGGGTaGATACAGCTGTGGACGCTT +
Preference number: 4 (lower is better)
Translates to: LVAQGLDGRSVDGACHVFLGPLG*IQLWTL
Trigger: AAGCGTCCACAGCTGTATCCACCCCAGAGGCCCCAG...AAACACATGACACGCACCATCTACACTTCGCCCATCAAGGCCCTGAGCAACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
CDS-3UTR CCA 90 bp AAACATGAGCTCAGTGAGGAGCAACTCATGGCTGCTCATGGCACAAGCCACCCGGGCTCAAATGCCCACTaGAAGGCTGGCTGGGGAATG +
Preference number: 4 (lower is better)
Translates to: KHELSEEQLMAAHGTSHPGSNAH*KAGWGM
Trigger: CATTCCCCAGCCAGCCTTCCAGTGGGCATTTGAGCC...CGGGTGGCTTGTGCCATGAGCAGCCATGAGTTGCTCCTCACTGAGCTCATGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp GGGTTCGGAGCACCTCTACTCGCTGATGGTACTCAGGAAGCAGCAGCAATGACTAACTGGGACTGCAGCTaGGACGGCTTCCCCATCATC +
Preference number: 4 (lower is better)
Translates to: GFGAPLLADGTQEAAAMTNWDCS*DGFPII
Trigger: GATGATGGGGAAGCCGTCCCAGCTGCAGTCCCAGTT...AGTCATTGCTGCTGCTTCCTGAGTACCATCAGCGAGTAGAGGTGCTCCGAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp CTGGTTGCTCAGGGCCTTGATGGGCGAAGTGTAGATGGTGCGTGTCATGTGTTTGCCAGGGCCTGTTCATaGGCCTTGCTGTCTTTGCGG +
Preference number: 4 (lower is better)
Translates to: LVAQGLDGRSVDGACHVFARACS*ALLSLR
Trigger: CCGCAAAGACAGCAAGGCCCATGAACAGGCCCTGGC...AAACACATGACACGCACCATCTACACTTCGCCCATCAAGGCCCTGAGCAACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp ATGGAAGGCTCCTCGGGAGTCCAGCAACAAAAAGAGCTCCCCCTGGGTCTTGGACGCTGGATCATGTGCTaGGTCTCTGTCAGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: MEGSSGVQQQKELPLGLGRWIMC*VSVSSS
Trigger: GGAGGAACTGACAGAGACCCAGCACATGATCCAGCG...TCCAAGACCCAGGGGGAGCTCTTTTTGTTGCTGGACTCCCGAGGAGCCTTCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp ATGGAGCGAAGGATCTCTGTGGTCATGATGAGGCAGGAGGCCTCCGGATGCAGCGGGTGGATACAGCTGTaGACGCTTCCTTTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: MERRISVVMMRQEASGCSGWIQL*TLPFGA
Trigger: TGCACCAAAAGGAAGCGTCCACAGCTGTATCCACCC...GCTGCATCCGGAGGCCTCCTGCCTCATCATGACCACAGAGATCCTTCGCTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461073.5
3UTR CAA 72 bp ATGTCCTCCACCCTGAGGGCATCCACTCGCAGCAAGTaGAGGATCATAGTGTACGTGAGGCGGAACTGGGAC +
Preference number: 4 (lower is better)
Translates to: MSSTLRASTRSK*RIIVYVRRNWD
Trigger: GTCCCAGTTCCGCCTCACGTACACTATGATCCTCAACTTGCTGCGAGTGGATGCCCTCAGGGTGGAGGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR TCA 90 bp GCTCAGGGCCTTGATGGGCGAAGTGTAGATGGTGCGTGTCATGTGTTTCTGGGCAGGCTGGCTGGGGAATaGGGCGATAGAAATCACCAA +
Preference number: 4 (lower is better)
Translates to: AQGLDGRSVDGACHVFLGRLAGE*GDRNHQ
Trigger: TTGGTGATTTCTATCGCCTCATTCCCCAGCCAGCCT...GCCCAGAAACACATGACACGCACCATCTACACTTCGCCCATCAAGGCCCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
CDS-3UTR TCA 90 bp AGCCCACCCTCTACAACTGACATATCTTTGAGCTGCAGGTCATTGACAGGGTCGGCGATTCAGGAGCTCTaGCATGTGCAGGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: SPPSTTDISLSCRSLTGSAIQEL*HVQDLG
Trigger: CCCCAGGTCCTGCACATGTCAGAGCTCCTGAATCGC...CGACCCTGTCAATGACCTGCAGCTCAAAGATATGTCAGTTGTAGAGGGTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR TCA 90 bp TACATGGGGCATTCACTGGGTGTAGAGGCTGGCCGCAAATACGATGTCCCGCCGACAAGACCAGGGTTGTaGATACTCTGCTGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: YMGHSLGVEAGRKYDVPPTRPGL*ILCWWS
Trigger: ACTCCACCAGCAGAGTATTCACAACCCTGGTCTTGT...CGGCGGGACATCGTATTTGCGGCCAGCCTCTACACCCAGTGAATGCCCCATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR TCA 90 bp AGGATCTCTGTGGTCATGATGAGGCAGGAGGCCTCCGGATGCAGCTGTACATCCGCTGCTGCCTCTTGCTaGAGTCCTCCAAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: RISVVMMRQEASGCSCTSAAASC*SPPRSS
Trigger: AGAAGATCTTGGAGGACTTCAGCAAGAGGCAGCAGC...GGATGTACAGCTGCATCCGGAGGCCTCCTGCCTCATCATGACCACAGAGATCCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR TCA 90 bp GGCAGCAATCTCCTCAGGCCGCAGGGTGCTCAGTGCATTGTCAAACATGAGCTCGGGGAGGATCCTTCTTaGATTTTGGCTGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: GSNLLRPQGAQCIVKHELGEDPS*ILAAAS
Trigger: AGAGGCAGCAGCCAAAATTCAAGAAGGATCCTCCCC...GAGCTCATGTTTGACAATGCACTGAGCACCCTGCGGCCTGAGGAGATTGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR TCA 90 bp GACAAAGACAGAGTCATGCCGTTCCAAGTGCAGGATGGCCTGTTTCTGAAACACATCTCAGCCAGGCGCTaGATGCAGCGGACCACCAGG +
Preference number: 4 (lower is better)
Translates to: DKDRVMPFQVQDGLFLKHISARR*MQRTTR
Trigger: CCTGGTGGTCCGCTGCATTCAGCGCCTGGCTGAGAT...GTGTTTCAGAAACAGGCCATCCTGCACTTGGAACGGCATGACTCTGTCTTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR GCA 90 bp AAGACCTTGACCAGGCCACGGCTGAAGAGCATCTCCACGATCTCCTTGAGGATGTCCTGGCTGTCCCACTaGCTCATTCTCATCCTCGTC +
Preference number: 4 (lower is better)
Translates to: KTLTRPRLKSISTISLRMSWLSH*LILILV
Trigger: GACGAGGATGAGAATGAGGCAGTGGGACAGCCAGGA...CATCCTCAAGGAGATCGTGGAGATGCTCTTCAGCCGTGGCCTGGTCAAGGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR GCA 90 bp ACGATGTCCCGCCGTAGCAAGGTAGCCGCTGTCTCCATCTTGGCACCCAGCACAGACATATCTTTGAGCTaGAGGTCATTGACAGGGTCG +
Preference number: 4 (lower is better)
Translates to: TMSRRSKVAAVSILAPSTDISLS*RSLTGS
Trigger: CGACCCTGTCAATGACCTGCAGCTCAAAGATATGTC...TGTGCTGGGTGCCAAGATGGAGACAGCGGCTACCTTGCTACGGCGGGACATCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR GCA 90 bp GCCGCAAATACGATGTCCCGCCGTAGCAAGGTAGCCGCTGTCTCCATCTTGGCAATCTCCTTCTGTATCTaGATTCGCTCCCGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: AANTMSRRSKVAAVSILAISFCI*IRSRSF
Trigger: GAAGCTGCGGGAGCGAATGCAGATACAGAAGGAGAT...TGCCAAGATGGAGACAGCGGCTACCTTGCTACGGCGGGACATCGTATTTGCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474839.5
ENST00000483553.5
ENST00000491994.1
CDS-3UTR CCA 90 bp GGATGGCCTGTTTCTGAAACACATCTGGCTCAAATGCCCACTGGAAGGCTGGCTTGCCCACTGGAAGGCTaGCTGGGGAATGAGGCGATA +
Preference number: 4 (lower is better)
Translates to: GWPVSETHLAQMPTGRLACPLEG*LGNEAI
Trigger: TATCGCCTCATTCCCCAGCCAGCCTTCCAGTGGGCA...AGCCAGCCTTCCAGTGGGCATTTGAGCCAGATGTGTTTCAGAAACAGGCCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
CDS-3UTR CCA 90 bp AAGGTAGCCGCTGTCTCCATCTTGGCACCCAGCACAGGCTCTCCTACCAGGCGGGTTCCAAGTGCAGGATaGCCTGTTTCTGAAACACAT +
Preference number: 4 (lower is better)
Translates to: KVAAVSILAPSTGSPTRRVPSAG*PVSETH
Trigger: ATGTGTTTCAGAAACAGGCCATCCTGCACTTGGAAC...CCGCCTGGTAGGAGAGCCTGTGCTGGGTGCCAAGATGGAGACAGCGGCTACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp CGAAGGATCTCTGTGGTCATGATGAGGCAGGAGGCCTCCGGATGCAGCTGTACATTGGCCCCAAAGGTCTaGGCGTGTTTGCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: RRISVVMMRQEASGCSCTLAPKV*ACLLIL
Trigger: GAGAATGAGCAAACACGCCCAGACCTTTGGGGCCAA...TGTACAGCTGCATCCGGAGGCCTCCTGCCTCATCATGACCACAGAGATCCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp TCCCGGAAGGTGGAGCCATCGTGTTTGCGCATGGAGTCAAACACTACTGTACGAAAGCTCCCAGCCTCTTaGTCAGTTCAGCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SRKVEPSCLRMESNTTVRKLPAS*SVQPGP
Trigger: AGGCCCTGGCTGAACTGACCAAGAGGCTGGGAGCTT...TCGTACAGTAGTGTTTGACTCCATGCGCAAACACGATGGCTCCACCTTCCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp GGCAGCAATCTCCTCAGGCCGCAGGGTGCTCAGTGCATTGTCAAACATGAGCTCTCCATGATGCGTCGCTaGATCATGTGCTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: GSNLLRPQGAQCIVKHELSMMRR*IMCWVS
Trigger: AGAGACCCAGCACATGATCCAGCGACGCATCATGGA...GAGCTCATGTTTGACAATGCACTGAGCACCCTGCGGCCTGAGGAGATTGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp TCCCAAACCTCAGGTACTCACCATGCCCCGGGCCCACTCATATACAACCTCAACTCCCACGAGGTCATCTaGATAGGGCACCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: SQTSGTHHAPGPLIYNLNSHEVI*IGHLCS
Trigger: ACTGCAGAGGTGCCCTATCCAGATGACCTCGTGGGA...GTTGAGGTTGTATATGAGTGGGCCCGGGGCATGGTGAGTACCTGAGGTTTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483553.5
CDS-3UTR CCA 90 bp AATCCCAAACCTCAGGTACTCACCATGCCCCGGGCCCACTCATATACAACCTCAAGCTTGACCACGGTGTaGTCACAAGGCCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: NPKPQVLTMPRAHSYTTSSLTTV*SQGPSG
Trigger: GCCTGAAGGGCCTTGTGACCACACCGTGGTCAAGCT...TGAGGTTGTATATGAGTGGGCCCGGGGCATGGTGAGTACCTGAGGTTTGGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483553.5
CDS-3UTR CCA 90 bp ATGACTGATCCGACAGTAGGAAGCGCAGCCGCTCCATCTCCTTCTGTATCTGCAGGCAGCCATATCTCCTaGCTGGAGCTTGACCACGGT +
Preference number: 4 (lower is better)
Translates to: MTDPTVGSAAAPSPSVSAGSHIS*LELDHG
Trigger: ACCGTGGTCAAGCTCCAGCCAGGAGATATGGCTGCC...TGCAGATACAGAAGGAGATGGAGCGGCTGCGCTTCCTACTGTCGGATCAGTCAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR CCA 90 bp CTACTCGCTGATGGTACTCAGGAAGCAGCAGCAATGACTGATCCGACAGTAGGAACTGAGGACAAGGGCTaGGCAGGAAAACGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LLADGTQEAAAMTDPTVGTEDKG*AGKRGL
Trigger: CAGCCCCCGTTTTCCTGCCCAGCCCTTGTCCTCAGT...TCCTACTGTCGGATCAGTCATTGCTGCTGCTTCCTGAGTACCATCAGCGAGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483553.5
3UTR CAA 72 bp TTCAGCCGCCCAATCCAGTCAGCAAACTCAAGGGCGTaGGGGACGGTGGCACTCAGAAGGATGATAGAAACG +
Preference number: 4 (lower is better)
Translates to: FSRPIQSANSRA*GTVALRRMIET
Trigger: CGTTTCTATCATCCTTCTGAGTGCCACCGTCCCCAACGCCCTTGAGTTTGCTGACTGGATTGGGCGGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
3UTR CAA 72 bp GCAGCAATCTCCTCAGGCCGCAGGGTGCTCAGTGCATaGTCAAACATGAGCTCAGTGAGGAGCAACTCATGG +
Preference number: 4 (lower is better)
Translates to: AAISSGRRVLSA*SNMSSVRSNSW
Trigger: CCATGAGTTGCTCCTCACTGAGCTCATGTTTGACAATGCACTGAGCACCCTGCGGCCTGAGGAGATTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR TCA 90 bp CTGTCCTGTGGGTCCTGGGACAAGGGCTTATCACACAAGACCAGGGTTGTGAATCAGGCAGGAACAGCTTaGATCCCACGAGGTCATCTG +
Preference number: 4 (lower is better)
Translates to: LSCGSWDKGLSHKTRVVNQAGTA*IPRGHL
Trigger: CAGATGACCTCGTGGGATTCAAGCTGTTCCTGCCTG...ATTCACAACCCTGGTCTTGTGTGATAAGCCCTTGTCCCAGGACCCACAGGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR TCA 90 bp AATCCCAAACCTCAGGTACTCACCATGCCCCGGGCCCACTCATATACAACCTCAAGCAGCAGCAATGACTaGTCCGACAGTAGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: NPKPQVLTMPRAHSYTTSSSSND*SDSRKR
Trigger: GCGCTTCCTACTGTCGGATCAGTCATTGCTGCTGCT...TGAGGTTGTATATGAGTGGGCCCGGGGCATGGTGAGTACCTGAGGTTTGGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483553.5
CDS-3UTR TCA 90 bp CGCAGCAAGTTGAGGATCATAGTGTACGTGAGGCGGAACTGGGACTGCAGCTGGGTTCTATTCCCTGCTTaGGGGTGTTTGGGAGCTGAT +
Preference number: 4 (lower is better)
Translates to: RSKLRIIVYVRRNWDCSWVLFPA*GCLGAD
Trigger: ATCAGCTCCCAAACACCCTCAAGCAGGGAATAGAAC...CCAGCTGCAGTCCCAGTTCCGCCTCACGTACACTATGATCCTCAACTTGCTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR GCA 90 bp GGATGGCCTGTTTCTGAAACACATCTGGCTCAAATGCCCACTGGAAGGCTGGCTCATTTTCGGGCTGAGTaGTCCACACCATGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: GWPVSETHLAQMPTGRLAHFRAE*STPCRG
Trigger: GCCTCTGCATGGTGTGGAGCACTCAGCCCGAAAATG...AGCCAGCCTTCCAGTGGGCATTTGAGCCAGATGTGTTTCAGAAACAGGCCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461073.5
CDS-3UTR GCA 90 bp GCCGCAAATACGATGTCCCGCCGTAGCAAGGTAGCCGCTGTCTCCATCTTGGCATTGAATTTTGGCTGCTaGCTCTTGCTGAAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: AANTMSRRSKVAAVSILALNFGC*LLLKSS
Trigger: GGAGGACTTCAGCAAGAGGCAGCAGCCAAAATTCAA...TGCCAAGATGGAGACAGCGGCTACCTTGCTACGGCGGGACATCGTATTTGCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR GCA 90 bp GGGGCATTCACTGGGTGTAGAGGCTGGCCGCAAATACGATGTCCCGCCGTAGCATTCTTGAATTTTGGCTaGTGCCTCTTGCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: GAFTGCRGWPQIRCPAVAFLNFG*CLLLKS
Trigger: GGACTTCAGCAAGAGGCAGCAGCCAAAATTCAAGAA...TGCTACGGCGGGACATCGTATTTGCGGCCAGCCTCTACACCCAGTGAATGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR GCA 90 bp ATGACTGATCCGACAGTAGGAAGCGCAGCCGCTCCATCTCCTTCTGTATCTGCACCTCAGGCCGCAGGGTaGTCAGTGCATTGTCAAACA +
Preference number: 4 (lower is better)
Translates to: MTDPTVGSAAAPSPSVSAPQAAG*SVHCQT
Trigger: TGTTTGACAATGCACTGAGCACCCTGCGGCCTGAGG...TGCAGATACAGAAGGAGATGGAGCGGCTGCGCTTCCTACTGTCGGATCAGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR CCA 90 bp TCAAAGATGACCCACTCCAGGTCCCGAATAACATCTGAGCCACTGTACAGCATGCCCTCTGGGACCTCCTaGCTGTCCCACTGCCTCATT +
Preference number: 4 (lower is better)
Translates to: SKMTHSRSRITSEPLYSMPSGTS*LSHCLI
Trigger: AATGAGGCAGTGGGACAGCCAGGAGGTCCCAGAGGG...CATGCTGTACAGTGGCTCAGATGTTATTCGGGACCTGGAGTGGGTCATCTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp TCAAAGATGACCCACTCCAGGTCCCGAATAACATCTGAGCCACTGTACAGCATGTGGCGTCCACAGGGATaGCCCACTGCTCCTGAGATG +
Preference number: 4 (lower is better)
Translates to: SKMTHSRSRITSEPLYSMWRPQG*PTAPEM
Trigger: CATCTCAGGAGCAGTGGGCCATCCCTGTGGACGCCA...CATGCTGTACAGTGGCTCAGATGTTATTCGGGACCTGGAGTGGGTCATCTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
CDS-3UTR CCA 90 bp CTGTTTCTGAAACACATCTGGCTCAAATGCCCACTGGAAGGCTGGCTGGGGAATGGCTCAAATGCCCACTaGAAGGCTGGCTGGGGAATG +
Preference number: 4 (lower is better)
Translates to: LFLKHIWLKCPLEGWLGNGSNAH*KAGWGM
Trigger: CATTCCCCAGCCAGCCTTCCAGTGGGCATTTGAGCC...ATTCCCCAGCCAGCCTTCCAGTGGGCATTTGAGCCAGATGTGTTTCAGAAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
CDS-3UTR CCA 90 bp TTATCATCATGTTTTTACATGGGGCATTCACTGGGTGTAGAGGCTGGCCGCAAAAGGGCACCTCTGCAGTaGCTGGCCCCCTGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: LSSCFYMGHSLGVEAGRKRAPLQ*LAPCPV
Trigger: CACAGGACAGGGGGCCAGCCACTGCAGAGGTGCCCT...TTTGCGGCCAGCCTCTACACCCAGTGAATGCCCCATGTAAAAACATGATGATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR CCA 90 bp CTGCAGATGTGTGAGCTGCGACAAAGACAGAGTCATGCCGTTCCAAGTGCAGGATCCCACGAGGTCATCTaGATAGGGCACCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: LQMCELRQRQSHAVPSAGSHEVI*IGHLCS
Trigger: ACTGCAGAGGTGCCCTATCCAGATGACCTCGTGGGA...TCCTGCACTTGGAACGGCATGACTCTGTCTTTGTCGCAGCTCACACATCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR TCA 90 bp TCCCGGAAGGTGGAGCCATCGTGTTTGCGCATGGAGTCAAACACTACTGTACGATGGAGCTGTTCCCTGTaGAAAGATAGTGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SRKVEPSCLRMESNTTVRWSCSL*KDSAPG
Trigger: CCCTGGAGCACTATCTTTTCACAGGGAACAGCTCCA...TCGTACAGTAGTGTTTGACTCCATGCGCAAACACGATGGCTCCACCTTCCGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR GCA 90 bp CTGTTTCTGAAACACATCTGGCTCAAATGCCCACTGGAAGGCTGGCTGGGGAATAGCAGTGGTCACGGCTaGAAGGGGAGGATCCTTCTT +
Preference number: 4 (lower is better)
Translates to: LFLKHIWLKCPLEGWLGNSSGHG*KGRILL
Trigger: AAGAAGGATCCTCCCCTTGCAGCCGTGACCACTGCT...ATTCCCCAGCCAGCCTTCCAGTGGGCATTTGAGCCAGATGTGTTTCAGAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR GCA 90 bp GACAAAGACAGAGTCATGCCGTTCCAAGTGCAGGATGGCCTGTTTCTGAAACACGGAGCAACTCATGGCTaGTCATGGCACAAGCCACCC +
Preference number: 4 (lower is better)
Translates to: DKDRVMPFQVQDGLFLKHGATHG*SWHKPP
Trigger: GGGTGGCTTGTGCCATGAGCAGCCATGAGTTGCTCC...GTGTTTCAGAAACAGGCCATCCTGCACTTGGAACGGCATGACTCTGTCTTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp TCAAAGATGACCCACTCCAGGTCCCGAATAACATCTGAGCCACTGTACAGCATGCAAGGAGGGAGGCCATaGGGAAGGCTACTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: SKMTHSRSRITSEPLYSMQGGRP*GRLLSG
Trigger: TCCAGAGAGTAGCCTTCCCCATGGCCTCCCTCCTTG...CATGCTGTACAGTGGCTCAGATGTTATTCGGGACCTGGAGTGGGTCATCTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461073.5
CDS-3UTR CCA 90 bp CACCGTCTGGTTCAGGCCACAAGCCACCTGGACCTCACCAATCCGCTTGGCCACAGTTGGACAATCTTTTaGTGCAAAGTCCATGCCTTT +
Preference number: 4 (lower is better)
Translates to: HRLVQATSHLDLTNPLGHSWTIF*CKVHAF
Trigger: AAAGGCATGGACTTTGCACCAAAAGATTGTCCAACT...GTGGCCAAGCGGATTGGTGAGGTCCAGGTGGCTTGTGGCCTGAACCAGACGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp CCGCTTGGCCACAGCCCGGACACGTTCTATTCCCTGCTTGAGGGTGTTTGGGAGATCCTTCTTGAATTTTaGCTGCTGCCTCTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: PLGHSPDTFYSLLEGVWEILLEF*LLPLAE
Trigger: TTCAGCAAGAGGCAGCAGCCAAAATTCAAGAAGGAT...CTCCCAAACACCCTCAAGCAGGGAATAGAACGTGTCCGGGCTGTGGCCAAGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR CCA 90 bp ATTGTCAAACATGAGCTCAGTGAGGAGCAACTCATGGCTGCTCATGGCACAAGCCTGCTTGAGGGTGTTTaGGAGCTGATCCCCAGCGTC +
Preference number: 4 (lower is better)
Translates to: IVKHELSEEQLMAAHGTSLLEGV*ELIPSV
Trigger: GACGCTGGGGATCAGCTCCCAAACACCCTCAAGCAG...GCTTGTGCCATGAGCAGCCATGAGTTGCTCCTCACTGAGCTCATGTTTGACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR CCA 90 bp ATCATGTTTTTACATGGGGCATTCACTGGGTGTAGAGGCTGGCCGCAAATACGACCTCACCAATCCGCTTaGCCACAGCCCGGACACGTT +
Preference number: 4 (lower is better)
Translates to: IMFLHGAFTGCRGWPQIRPHQSA*PQPGHV
Trigger: AACGTGTCCGGGCTGTGGCCAAGCGGATTGGTGAGG...TCGTATTTGCGGCCAGCCTCTACACCCAGTGAATGCCCCATGTAAAAACATGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000474839.5
ENST00000483553.5
ENST00000491994.1
CDS-3UTR CCA 90 bp AAATTCAGCTCCCCCACAAATTCCTCCACCGTCTGGTTCAGGCCACAAGCCACCGAAGATGCTACTCTCTaGAGCTCCAGGCAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: KFSSPTNSSTVWFRPQATEDATL*SSRQVQ
Trigger: CTGAACTTGCCTGGAGCTCCAGAGAGTAGCATCTTC...GGTGGCTTGTGGCCTGAACCAGACGGTGGAGGAATTTGTGGGGGAGCTGAATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR TCA 90 bp TCCCGGAAGGTGGAGCCATCGTGTTTGCGCATGGAGTCAAACACTACTGTACGATTTCCTGCAGATGTGTaGGCTGCGACAAAGACAGAG +
Preference number: 4 (lower is better)
Translates to: SRKVEPSCLRMESNTTVRFPADV*AATKTE
Trigger: CTCTGTCTTTGTCGCAGCTCACACATCTGCAGGAAA...TCGTACAGTAGTGTTTGACTCCATGCGCAAACACGATGGCTCCACCTTCCGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR TCA 90 bp CGCAGCAAGTTGAGGATCATAGTGTACGTGAGGCGGAACTGGGACTGCAGCTGGCACGCTCGACATCGTTaGTATAGTGAACCTCATCAA +
Preference number: 4 (lower is better)
Translates to: RSKLRIIVYVRRNWDCSWHARHR*YSEPHQ
Trigger: TTGATGAGGTTCACTATATCAACGATGTCGAGCGTG...CCAGCTGCAGTCCCAGTTCCGCCTCACGTACACTATGATCCTCAACTTGCTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR TCA 90 bp AGCCCACCCTCTACAACTGACATATCTTTGAGCTGCAGGTCATTGACAGGGTCGCGTTCACAGACTCCATaGTGCGTCGCTGGATCATGT +
Preference number: 4 (lower is better)
Translates to: SPPSTTDISLSCRSLTGSRSQTP*CVAGSC
Trigger: ACATGATCCAGCGACGCATCATGGAGTCTGTGAACG...CGACCCTGTCAATGACCTGCAGCTCAAAGATATGTCAGTTGTAGAGGGTGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR TCA 90 bp AATCCCAAACCTCAGGTACTCACCATGCCCCGGGCCCACTCATATACAACCTCACCCACCCTCTACAACTaGCATATCTTTGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: NPKPQVLTMPRAHSYTTSPTLYN*HIFELQ
Trigger: CTGCAGCTCAAAGATATGTCAGTTGTAGAGGGTGGG...TGAGGTTGTATATGAGTGGGCCCGGGGCATGGTGAGTACCTGAGGTTTGGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483553.5
CDS-3UTR GCA 90 bp GGTGAGCAGCCCCACATCCCCGAATGTGTTTCGGAAGTCCCGGAACTTCTGGTTCAGAAACAACTGTTCTaGTTCTTGCTGCAGATCTGG +
Preference number: 4 (lower is better)
Translates to: GEQPHIPECVSEVPELLVQKQLF*FLLQIW
Trigger: CCAGATCTGCAGCAAGAAGCAGAACAGTTGTTTCTG...AACCAGAAGTTCCGGGACTTCCGAAACACATTCGGGGATGTGGGGCTGCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461073.5
CDS-3UTR GCA 90 bp AGGATCTCTGTGGTCATGATGAGGCAGGAGGCCTCCGGATGCAGCTGTACATCCGACGCTTCCTTTTGGTaGAAAGTCCATGCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: RISVVMMRQEASGCSCTSDASFW*KVHAFL
Trigger: AAGAAAGGCATGGACTTTGCACCAAAAGGAAGCGTC...GGATGTACAGCTGCATCCGGAGGCCTCCTGCCTCATCATGACCACAGAGATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461073.5
CDS-3UTR TCA 90 bp CGCATGGAGTCAAACACTACTGTACGAGCAGGCATGTTTACTCCCATGGCAAAGGAACCTCATCAAAGATaGCCCACTCCAGGTCCCGAA +
Preference number: 4 (lower is better)
Translates to: RMESNTTVRAGMFTPMAKEPHQR*PTPGPE
Trigger: TTCGGGACCTGGAGTGGGTCATCTTTGATGAGGTTC...CTTTGCCATGGGAGTAAACATGCCTGCTCGTACAGTAGTGTTTGACTCCATGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR TCA 90 bp TTATCATCATGTTTTTACATGGGGCATTCACTGGGTGTAGAGGCTGGCCGCAAACACCACCCTTCCTGCTaGGAGAGACTTCAGCCCGTT +
Preference number: 4 (lower is better)
Translates to: LSSCFYMGHSLGVEAGRKHHPSC*ERLQPV
Trigger: AACGGGCTGAAGTCTCTCTCAGCAGGAAGGGTGGTG...TTTGCGGCCAGCCTCTACACCCAGTGAATGCCCCATGTAAAAACATGATGATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR TCA 90 bp TCATGTTTTTACATGGGGCATTCACTGGGTGTAGAGGCTGGCCGCAAATACGATAGCACCTCTACTCGCTaGTGGTACTCAGGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: SCFYMGHSLGVEAGRKYDSTSTR*WYSGSS
Trigger: GCTGCTTCCTGAGTACCATCAGCGAGTAGAGGTGCT...ATCGTATTTGCGGCCAGCCTCTACACCCAGTGAATGCCCCATGTAAAAACATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000474839.5
ENST00000483553.5
ENST00000491994.1
CDS-3UTR GCA 90 bp AACAAGACCTTGACCAGGCCACGGCTGAAGAGCATCTCCACGATCTCCTTGAGGTTCTTGAATTTTGGCTaGTGCCTCTTGCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: NKTLTRPRLKSISTISLRFLNFG*CLLLKS
Trigger: GGACTTCAGCAAGAGGCAGCAGCCAAAATTCAAGAA...CCTCAAGGAGATCGTGGAGATGCTCTTCAGCCGTGGCCTGGTCAAGGTCTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR GCA 90 bp ATCATGTTTTTACATGGGGCATTCACTGGGTGTAGAGGCTGGCCGCAAATACGACCTCAGGCCGCAGGGTaGTCAGTGCATTGTCAAACA +
Preference number: 4 (lower is better)
Translates to: IMFLHGAFTGCRGWPQIRPQAAG*SVHCQT
Trigger: TGTTTGACAATGCACTGAGCACCCTGCGGCCTGAGG...TCGTATTTGCGGCCAGCCTCTACACCCAGTGAATGCCCCATGTAAAAACATGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000474839.5
ENST00000483553.5
ENST00000491994.1
CDS-3UTR CCA 90 bp TTCCTGCAGATGTGTGAGCTGCGACAAAGACAGAGTCATGCCGTTCCAAGTGCAGGGTGGATACAGCTGTaGACGCTTCCTTCAACACTA +
Preference number: 4 (lower is better)
Translates to: FLQMCELRQRQSHAVPSAGWIQL*TLPSTL
Trigger: TAGTGTTGAAGGAAGCGTCCACAGCTGTATCCACCC...TGCACTTGGAACGGCATGACTCTGTCTTTGTCGCAGCTCACACATCTGCAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp GCTCAGGGCCTTGATGGGCGAAGTGTAGATGGTGCGTGTCATGTGTTTCTGGGCTTTCTGAAACACATCTaGCTCAAATGCCCACTGGAA +
Preference number: 4 (lower is better)
Translates to: AQGLDGRSVDGACHVFLGFLKHI*LKCPLE
Trigger: TTCCAGTGGGCATTTGAGCCAGATGTGTTTCAGAAA...GCCCAGAAACACATGACACGCACCATCTACACTTCGCCCATCAAGGCCCTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
CDS-3UTR CCA 90 bp GACAAAGACAGAGTCATGCCGTTCCAAGTGCAGGATGGCCTGTTTCTGAAACACAAGTCCCGGAACTTCTaGTTGCTCAGGGCCTTGATG +
Preference number: 4 (lower is better)
Translates to: DKDRVMPFQVQDGLFLKHKSRNF*LLRALM
Trigger: CATCAAGGCCCTGAGCAACCAGAAGTTCCGGGACTT...GTGTTTCAGAAACAGGCCATCCTGCACTTGGAACGGCATGACTCTGTCTTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
CDS-3UTR CCA 90 bp TCATGTTTTTACATGGGGCATTCACTGGGTGTAGAGGCTGGCCGCAAATACGATAATTCCTCCACCGTCTaGTTCAGGCCACAAGCCACC +
Preference number: 4 (lower is better)
Translates to: SCFYMGHSLGVEAGRKYDNSSTV*FRPQAT
Trigger: GGTGGCTTGTGGCCTGAACCAGACGGTGGAGGAATT...ATCGTATTTGCGGCCAGCCTCTACACCCAGTGAATGCCCCATGTAAAAACATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000474839.5
ENST00000483553.5
ENST00000491994.1
CDS-3UTR CCA 90 bp GGATGGCCTGTTTCTGAAACACATCTGGCTCAAATGCCCACTGGAAGGCTGGCTGTGGACGCTTCCTTTTaGTGCAAAGTCCATGCCTTT +
Preference number: 4 (lower is better)
Translates to: GWPVSETHLAQMPTGRLAVDASF*CKVHAF
Trigger: AAAGGCATGGACTTTGCACCAAAAGGAAGCGTCCAC...AGCCAGCCTTCCAGTGGGCATTTGAGCCAGATGTGTTTCAGAAACAGGCCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461073.5
CDS-3UTR TCA 90 bp CTGCAGATGTGTGAGCTGCGACAAAGACAGAGTCATGCCGTTCCAAGTGCAGGAAGGATGGCCTGTTTCTaGAACACATCTGGCTCAAAT +
Preference number: 4 (lower is better)
Translates to: LQMCELRQRQSHAVPSAGRMACF*NTSGSN
Trigger: ATTTGAGCCAGATGTGTTTCAGAAACAGGCCATCCT...TCCTGCACTTGGAACGGCATGACTCTGTCTTTGTCGCAGCTCACACATCTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
CDS-3UTR TCA 90 bp GACAAAGACAGAGTCATGCCGTTCCAAGTGCAGGATGGCCTGTTTCTGAAACACTTTCCTGCAGATGTGTaGGCTGCGACAAAGACAGAG +
Preference number: 4 (lower is better)
Translates to: DKDRVMPFQVQDGLFLKHFPADV*AATKTE
Trigger: CTCTGTCTTTGTCGCAGCTCACACATCTGCAGGAAA...GTGTTTCAGAAACAGGCCATCCTGCACTTGGAACGGCATGACTCTGTCTTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
CDS-3UTR TCA 90 bp CGACAAAGACAGAGTCATGCCGTTCCAAGTGCAGGATGGCCTGTTTCTGAAACAGTCCCGAATAACATCTaGGCCACTGTACAGCATGGA +
Preference number: 4 (lower is better)
Translates to: RQRQSHAVPSAGWPVSETVPNNI*ATVQHG
Trigger: TCCATGCTGTACAGTGGCTCAGATGTTATTCGGGAC...TGTTTCAGAAACAGGCCATCCTGCACTTGGAACGGCATGACTCTGTCTTTGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
CDS-3UTR TCA 90 bp TTATCATCATGTTTTTACATGGGGCATTCACTGGGTGTAGAGGCTGGCCGCAAAAGCACCTCTACTCGCTaGTGGTACTCAGGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: LSSCFYMGHSLGVEAGRKSTSTR*WYSGSS
Trigger: GCTGCTTCCTGAGTACCATCAGCGAGTAGAGGTGCT...TTTGCGGCCAGCCTCTACACCCAGTGAATGCCCCATGTAAAAACATGATGATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000474839.5
ENST00000483553.5
ENST00000491994.1
CDS-3UTR GCA 90 bp CTGTTTCTGAAACACATCTGGCTCAAATGCCCACTGGAAGGCTGGCTGGGGAATAACTGTTCTGCTTCTTaGTGCAGATCTGGGGCACAA +
Preference number: 4 (lower is better)
Translates to: LFLKHIWLKCPLEGWLGNNCSAS*CRSGAQ
Trigger: TTGTGCCCCAGATCTGCAGCAAGAAGCAGAACAGTT...ATTCCCCAGCCAGCCTTCCAGTGGGCATTTGAGCCAGATGTGTTTCAGAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461073.5
CDS-3UTR GCA 90 bp CTGTTTCTGAAACACATCTGGCTCAAATGCCCACTGGAAGGCTGGCTGGGGAATTGCAGATGTGTGAGCTaGGACAAAGACAGAGTCATG +
Preference number: 4 (lower is better)
Translates to: LFLKHIWLKCPLEGWLGNCRCVS*DKDRVM
Trigger: CATGACTCTGTCTTTGTCGCAGCTCACACATCTGCA...ATTCCCCAGCCAGCCTTCCAGTGGGCATTTGAGCCAGATGTGTTTCAGAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
CDS-3UTR CCA 90 bp GGATGGCCTGTTTCTGAAACACATCTGGCTCAAATGCCCACTGGAAGGCTGGCTTCCAGGAGCTGGAGTTaGACAATCTTTTGGTGCAAA +
Preference number: 4 (lower is better)
Translates to: GWPVSETHLAQMPTGRLASRSWS*TIFWCK
Trigger: TTTGCACCAAAAGATTGTCCAACTCCAGCTCCTGGA...AGCCAGCCTTCCAGTGGGCATTTGAGCCAGATGTGTTTCAGAAACAGGCCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp CTGCAGATGTGTGAGCTGCGACAAAGACAGAGTCATGCCGTTCCAAGTGCAGGAGTTCCAAGTGCAGGATaGCCTGTTTCTGAAACACAT +
Preference number: 4 (lower is better)
Translates to: LQMCELRQRQSHAVPSAGVPSAG*PVSETH
Trigger: ATGTGTTTCAGAAACAGGCCATCCTGCACTTGGAAC...TCCTGCACTTGGAACGGCATGACTCTGTCTTTGTCGCAGCTCACACATCTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
CDS-3UTR CCA 90 bp TTTATCATCATGTTTTTACATGGGGCATTCACTGGGTGTAGAGGCTGGCCGCAACGCTGCAGGAAGAGGTaGATCTCGCTCTTCTCCGAA +
Preference number: 4 (lower is better)
Translates to: FIIMFLHGAFTGCRGWPQRCRKR*ISLFSE
Trigger: TTCGGAGAAGAGCGAGATCCACCTCTTCCTGCAGCG...TTGCGGCCAGCCTCTACACCCAGTGAATGCCCCATGTAAAAACATGATGATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp TCCCAAACCTCAGGTACTCACCATGCCCCGGGCCCACTCATATACAACCTCAACATCCTTCTTGAATTTTaGCTGCTGCCTCTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: SQTSGTHHAPGPLIYNLNILLEF*LLPLAE
Trigger: TTCAGCAAGAGGCAGCAGCCAAAATTCAAGAAGGAT...GTTGAGGTTGTATATGAGTGGGCCCGGGGCATGGTGAGTACCTGAGGTTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483553.5
CDS-3UTR TCA 90 bp TCATGTTTTTACATGGGGCATTCACTGGGTGTAGAGGCTGGCCGCAAATACGATGTTCTATTCCCTGCTTaGGGGTGTTTGGGAGCTGAT +
Preference number: 4 (lower is better)
Translates to: SCFYMGHSLGVEAGRKYDVLFPA*GCLGAD
Trigger: ATCAGCTCCCAAACACCCTCAAGCAGGGAATAGAAC...ATCGTATTTGCGGCCAGCCTCTACACCCAGTGAATGCCCCATGTAAAAACATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000474839.5
ENST00000483553.5
ENST00000491994.1
CDS-3UTR TCA 90 bp CACATCTGGCTCAAATGCCCACTGGAAGGCTGGCTGGGGAATGAGGCGATAGAATTACCTCGACATCGTTaGTATAGTGAACCTCATCAA +
Preference number: 4 (lower is better)
Translates to: HIWLKCPLEGWLGNEAIELPRHR*YSEPHQ
Trigger: TTGATGAGGTTCACTATATCAACGATGTCGAGGTAA...TTCTATCGCCTCATTCCCCAGCCAGCCTTCCAGTGGGCATTTGAGCCAGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461073.5
CDS-3UTR GCA 90 bp TCAAAGATGACCCACTCCAGGTCCCGAATAACATCTGAGCCACTGTACAGCATGACAAAGACAGAGTCATaGCGTTCCAAGTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: SKMTHSRSRITSEPLYSMTKTES*RSKCRM
Trigger: CATCCTGCACTTGGAACGGCATGACTCTGTCTTTGT...CATGCTGTACAGTGGCTCAGATGTTATTCGGGACCTGGAGTGGGTCATCTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
CDS-3UTR CCA 90 bp CGACAAAGACAGAGTCATGCCGTTCCAAGTGCAGGATGGCCTGTTTCTGAAACATGTTCAGATCTGTTATaGTGGGTTCATCCATCCCCC +
Preference number: 4 (lower is better)
Translates to: RQRQSHAVPSAGWPVSETCSDLL*WVHPSP
Trigger: GGGGGATGGATGAACCCACCATAACAGATCTGAACA...TGTTTCAGAAACAGGCCATCCTGCACTTGGAACGGCATGACTCTGTCTTTGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461073.5
CDS-3UTR GCA 90 bp TGCATAGTACCCTTTTGTATGGAAGGCTCCTCGGGAGTCCAGCAACAAAAAGAGGACATATCTTTGAGCTaGAGGTCATTGACAGGGTCG +
Preference number: 4 (lower is better)
Translates to: CIVPFCMEGSSGVQQQKEDISLS*RSLTGS
Trigger: CGACCCTGTCAATGACCTGCAGCTCAAAGATATGTC...CTCTTTTTGTTGCTGGACTCCCGAGGAGCCTTCCATACAAAAGGGTACTATGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp TCAAAGATGACCCACTCCAGGTCCCGAATAACATCTGAGCCACTGTACAGCATGCATCGTGTTTGCGCATaGAGTCAAACACTACTGTAC +
Preference number: 4 (lower is better)
Translates to: SKMTHSRSRITSEPLYSMHRVCA*SQTLLY
Trigger: GTACAGTAGTGTTTGACTCCATGCGCAAACACGATG...CATGCTGTACAGTGGCTCAGATGTTATTCGGGACCTGGAGTGGGTCATCTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CCA 90 bp GGCAGCAATCTCCTCAGGCCGCAGGGTGCTCAGTGCATTGTCAAACATGAGCTCTTTCTTGAAACCAGGTaGAATAGTAAGAAGATGCTA +
Preference number: 4 (lower is better)
Translates to: GSNLLRPQGAQCIVKHELFLETR*NSKKML
Trigger: TAGCATCTTCTTACTATTCCACCTGGTTTCAAGAAA...GAGCTCATGTTTGACAATGCACTGAGCACCCTGCGGCCTGAGGAGATTGCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR GCA 90 bp TTTATCATCATGTTTTTACATGGGGCATTCACTGGGTGTAGAGGCTGGCCGCAATGCAGATGTGTGAGCTaGGACAAAGACAGAGTCATG +
Preference number: 4 (lower is better)
Translates to: FIIMFLHGAFTGCRGWPQCRCVS*DKDRVM
Trigger: CATGACTCTGTCTTTGTCGCAGCTCACACATCTGCA...TTGCGGCCAGCCTCTACACCCAGTGAATGCCCCATGTAAAAACATGATGATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR GCA 90 bp TTTATCATCATGTTTTTACATGGGGCATTCACTGGGTGTAGAGGCTGGCCGCAATTGAATTTTGGCTGCTaGCTCTTGCTGAAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: FIIMFLHGAFTGCRGWPQLNFGC*LLLKSS
Trigger: GGAGGACTTCAGCAAGAGGCAGCAGCCAAAATTCAA...TTGCGGCCAGCCTCTACACCCAGTGAATGCCCCATGTAAAAACATGATGATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR CCA 90 bp TCAAAGATGACCCACTCCAGGTCCCGAATAACATCTGAGCCACTGTACAGCATGTTTCTGAAACACATCTaGCTCAAATGCCCACTGGAA +
Preference number: 4 (lower is better)
Translates to: SKMTHSRSRITSEPLYSMFLKHI*LKCPLE
Trigger: TTCCAGTGGGCATTTGAGCCAGATGTGTTTCAGAAA...CATGCTGTACAGTGGCTCAGATGTTATTCGGGACCTGGAGTGGGTCATCTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
CDS GCA 90 bp GCCACAGCAGCTGCCTGGCAGCCCGGAAGTGCGGCAAGTAGTCGCTaGGAAGTAAGCCCCGCCCCGGAACGGGCGGAAGTAGAGGCAACT +
Preference number: 5 (lower is better)
Translates to: ATAAAWQPGSAASSR*EVSPAPERAEVEAT
Trigger: AGTTGCCTCTACTTCCGCCCGTTCCGGGGCGGGGCTTACTTCGCAGCGACTACTTGCCGCACTTCCGGGCTGCCAGGCAGCTGCTGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383336.6
ENST00000412823.4
ENST00000421789.4
ENST00000429465.4
ENST00000448219.4
CDS GCA 90 bp GGAAGGCTACTCTCTGGAGCTCCAGGCAAGTTCAGCAGCTCCCAGTaGCCCGTGCATCCGAGCTCCACGGCCCGAAGGGGTAGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: GRLLSGAPGKFSSSQ*PVHPSSTARRGRSR
Trigger: CCTGGACCTACCCCTTCGGGCCGTGGAGCTCGGATGCACGGGGCACTGGGAGCTGCTGAACTTGCCTGGAGCTCCAGAGAGTAGCCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000375394.7
ENST00000383336.6
ENST00000412823.4
ENST00000421789.4
ENST00000429465.4
ENST00000448219.4
ENST00000460033.5
ENST00000461073.5
ENST00000465599.5
ENST00000465703.5
ENST00000476485.5
ENST00000476651.5
ENST00000488648.5
ENST00000490619.5
ENST00000490951.5
ENST00000491926.5
ENST00000492133.5
ENST00000496229.5
ENST00000497600.5
CDS GCA 90 bp CTCACGCTACTCTCTGGAGCTCCAGGCAAGTTCAGCAGCTCCCAGTaGCCCGTGCATCCGAGCTCCACGGCCCGAAGGGGTAGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: LTLLSGAPGKFSSSQ*PVHPSSTARRGRSR
Trigger: CCTGGACCTACCCCTTCGGGCCGTGGAGCTCGGATGCACGGGGCACTGGGAGCTGCTGAACTTGCCTGGAGCTCCAGAGAGTAGCGTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000476793.1
ENST00000482606.1
ENST00000488599.1
ENST00000492290.1
ENST00000492900.1
ENST00000494416.1
CDS GCA 90 bp GGTCTCCCTCAGGCTGGAGGAAACTCCCAGACCACTGCCCCTCCCTaGCTCTACGTGCCCCTCTGGAGGAGAAGGGCCTCCCTAGCATCT +
Preference number: 5 (lower is better)
Translates to: GLPQAGGNSQTTAPP*LYVPLWRRRASLAS
Trigger: AGATGCTAGGGAGGCCCTTCTCCTCCAGAGGGGCACGTAGAGGCAGGGAGGGGCAGTGGTCTGGGAGTTTCCTCCAGCCTGAGGGAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000463549.5
ENST00000467720.5
ENST00000479354.5
ENST00000480573.5
ENST00000494058.5
ENST00000494521.5
CDS-3UTR CAA 90 bp CGCTGTCTCCATCTTGGCACCCAGCACAGGCTCTCCTACCAGGCGGGCTGCCCCGTGGCAAACAAGACCTaGACCAGGCCACGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: RCLHLGTQHRLSYQAGCPVANKT*TRPRLK
Trigger: CTTCAGCCGTGGCCTGGTCAAGGTCTTGTTTGCCAC...GGGGCAGCCCGCCTGGTAGGAGAGCCTGTGCTGGGTGCCAAGATGGAGACAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CAA 90 bp AGGGCTCTGGCAGACCAGGCCAGAGAGCAAGGCAGCAATCTCCTCAGGCCGCAGTCGGGCACTCGGCCCTaGCAGAGCAGGATAACGGTG +
Preference number: 5 (lower is better)
Translates to: RALADQAREQGSNLLRPQSGTRP*QSRITV
Trigger: CACCGTTATCCTGCTCTGCAAGGGCCGAGTGCCCGA...CTGCGGCCTGAGGAGATTGCTGCCTTGCTCTCTGGCCTGGTCTGCCAGAGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CAA 90 bp CTCTGGCAGACCAGGCCAGAGAGCAAGGCAGCAATCTCCTCAGGCCGCAGGGTGACCTCACCAATCCGCTaGGCCACAGCCCGGACACGT +
Preference number: 5 (lower is better)
Translates to: LWQTRPESKAAISSGRRVTSPIR*ATARTR
Trigger: ACGTGTCCGGGCTGTGGCCAAGCGGATTGGTGAGGT...CACCCTGCGGCCTGAGGAGATTGCTGCCTTGCTCTCTGGCCTGGTCTGCCAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS GCA 90 bp AAGATGCTACTCTCTGGAGCTCCAGGCAAGTTCAGCAGCTCCCAGTaGCCCGTGCATCCGAGCTCCACGGCCCGAAGGGGTAGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: KMLLSGAPGKFSSSQ*PVHPSSTARRGRSR
Trigger: CCTGGACCTACCCCTTCGGGCCGTGGAGCTCGGATGCACGGGGCACTGGGAGCTGCTGAACTTGCCTGGAGCTCCAGAGAGTAGCATCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000474839.5
ENST00000626050.1
ENST00000626668.1
ENST00000627011.1
ENST00000627041.1
ENST00000627683.1
ENST00000628157.1
CDS CCA 90 bp CACAAGTCGCTCTGTCTCCATCATCCTGGAGCCACAGCAGCTGCCTaGCAGCCCGGAAGTGCGGCAAGTAGTCGCTGCGAAGTAAGCCCC +
Preference number: 5 (lower is better)
Translates to: HKSLCLHHPGATAAA*QPGSAASSRCEVSP
Trigger: GGGGCTTACTTCGCAGCGACTACTTGCCGCACTTCCGGGCTGCCAGGCAGCTGCTGTGGCTCCAGGATGATGGAGACAGAGCGACTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000383336.6
ENST00000412823.4
ENST00000421789.4
ENST00000429465.4
ENST00000448219.4
ENST00000460033.5
ENST00000476651.5
ENST00000488648.5
ENST00000490619.5
ENST00000490951.5
ENST00000492133.5
CDS CCA 90 bp CACAGGGATGGCCCACTGCTCCTGAGATGGAGGCTCTGGGGCCTCTaGGGTGGATACAGCTGTGGACGCTTCCTGGAAGAGTCAGGGGTA +
Preference number: 5 (lower is better)
Translates to: HRDGPLLLRWRLWGL*GGYSCGRFLEESGV
Trigger: TACCCCTGACTCTTCCAGGAAGCGTCCACAGCTGTATCCACCCCAGAGGCCCCAGAGCCTCCATCTCAGGAGCAGTGGGCCATCCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000464208.1
ENST00000465599.5
ENST00000465703.5
ENST00000466290.1
ENST00000471708.1
ENST00000476485.5
ENST00000479061.1
ENST00000487095.1
ENST00000491926.5
ENST00000491970.1
ENST00000496229.5
ENST00000497600.5
CDS-3UTR CAA 90 bp AGGGCTCTGGCAGACCAGGCCAGAGAGCAAGGCAGCAATCTCCTCAGGCCGCAGTTCACCCGGAGCACCTaGGTGGTGATGGCAGCCATA +
Preference number: 5 (lower is better)
Translates to: RALADQAREQGSNLLRPQFTRST*VVMAAI
Trigger: TATGGCTGCCATCACCACCAAGGTGCTCCGGGTGAA...CTGCGGCCTGAGGAGATTGCTGCCTTGCTCTCTGGCCTGGTCTGCCAGAGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR CAA 90 bp CGTAGCAAGGTAGCCGCTGTCTCCATCTTGGCACCCAGCACAGGCTCTCCTACCACCTCACCAATCCGCTaGGCCACAGCCCGGACACGT +
Preference number: 5 (lower is better)
Translates to: RSKVAAVSILAPSTGSPTTSPIR*ATARTR
Trigger: ACGTGTCCGGGCTGTGGCCAAGCGGATTGGTGAGGT...GGTAGGAGAGCCTGTGCTGGGTGCCAAGATGGAGACAGCGGCTACCTTGCTACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474839.5
ENST00000483553.5
ENST00000491994.1
CDS-3UTR CAA 90 bp CCCAGGGCTCTGGCAGACCAGGCCAGAGAGCAAGGCAGCAATCTCCTCAGGCCGTCAGGCAGGAACAGCTaGAATCCCACGAGGTCATCT +
Preference number: 5 (lower is better)
Translates to: PRALADQAREQGSNLLRPSGRNS*NPTRSS
Trigger: AGATGACCTCGTGGGATTCAAGCTGTTCCTGCCTGA...CGGCCTGAGGAGATTGCTGCCTTGCTCTCTGGCCTGGTCTGCCAGAGCCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS GCA 90 bp CCAGCTTCACAGTGCCCGCCCTCTACAACTGACATATCTTTGAGCTaGAGGTCATTGACAGGGTCGAGGGTGGGAGGTCCGGCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: PASQCPPSTTDISLS*RSLTGSRVGGPAGW
Trigger: CCACCCAGCCGGACCTCCCACCCTCGACCCTGTCAATGACCTGCAGCTCAAAGATATGTCAGTTGTAGAGGGCGGGCACTGTGAAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464568.5
ENST00000471818.1
ENST00000479139.5
ENST00000485285.5
ENST00000487359.5
ENST00000496789.1
CDS CCA 90 bp CACAGGGATGGCCCACTGCTCCTGAGATGGAGGCTCTGGGGCCTCTaGGGTGGATACAGCTGTGGACGCTTCCTTTTGGTGCAAAGTCCA +
Preference number: 5 (lower is better)
Translates to: HRDGPLLLRWRLWGL*GGYSCGRFLLVQSP
Trigger: TGGACTTTGCACCAAAAGGAAGCGTCCACAGCTGTATCCACCCCAGAGGCCCCAGAGCCTCCATCTCAGGAGCAGTGGGCCATCCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461073.5
CDS CCA 90 bp CCGTCTGGTTCAGGCCACAAGCCACCTGGACCTCACCAATCCGCTTaGCCACAGCCCGGACACGTTCTATTCCCTGCAGGAAAGAAGGAG +
Preference number: 5 (lower is better)
Translates to: PSGSGHKPPGPHQSA*PQPGHVLFPAGKKE
Trigger: CTCCTTCTTTCCTGCAGGGAATAGAACGTGTCCGGGCTGTGGCCAAGCGGATTGGTGAGGTCCAGGTGGCTTGTGGCCTGAACCAGACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000462557.5
ENST00000472288.5
ENST00000485243.5
ENST00000485349.5
ENST00000485471.5
ENST00000493433.1
CDS-3UTR CAA 90 bp TCTGTGGTCATGATGAGGCAGGAGGCCTCCGGATGCAGCTGTACATCCCCGGTGATCTCCACGATCTCCTaGAGGATGGGCAGGATGCCG +
Preference number: 5 (lower is better)
Translates to: SVVMMRQEASGCSCTSPVISTIS*RMGRMP
Trigger: CGGCATCCTGCCCATCCTCAAGGAGATCGTGGAGAT...CACCGGGGATGTACAGCTGCATCCGGAGGCCTCCTGCCTCATCATGACCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CAA 90 bp TCCTTCTGTATCTGCATTCGCTCCCGCAGCTTCAGGTACTGCAGAGAGCCACCCACCTCACCAATCCGCTaGGCCACAGCCCGGACACGT +
Preference number: 5 (lower is better)
Translates to: SFCICIRSRSFRYCREPPTSPIR*ATARTR
Trigger: ACGTGTCCGGGCTGTGGCCAAGCGGATTGGTGAGGT...GGGTGGCTCTCTGCAGTACCTGAAGCTGCGGGAGCGAATGCAGATACAGAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483553.5
CDS GCA 90 bp GGCCTGAGCCAGACGCAGCAGTTCCTGGACAGCAGTGGTCACGGCTaGAAGGGGAGGATCCTTCCTGAAGAGGGAGCAGATCTTAAGATC +
Preference number: 5 (lower is better)
Translates to: GLSQTQQFLDSSGHG*KGRILPEEGADLKI
Trigger: GATCTTAAGATCTGCTCCCTCTTCAGGAAGGATCCTCCCCTTGCAGCCGTGACCACTGCTGTCCAGGAACTGCTGCGTCTGGCTCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000463549.5
ENST00000467720.5
ENST00000479354.5
ENST00000480573.5
ENST00000494058.5
ENST00000494521.5
CDS-3UTR CAA 90 bp CGCAGCAAGTTGAGGATCATAGTGTACGTGAGGCGGAACTGGGACTGCAGCTGGAAAGCTCCCAGCCTCTaGGTCAGTTCAGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: RSKLRIIVYVRRNWDCSWKAPSL*VSSARA
Trigger: GGCCCTGGCTGAACTGACCAAGAGGCTGGGAGCTTT...CCAGCTGCAGTCCCAGTTCCGCCTCACGTACACTATGATCCTCAACTTGCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CAA 90 bp AAGGTAGCCGCTGTCTCCATCTTGGCACCCAGCACAGGCTCTCCTACCAGGCGGTTTGGCTGCTGCCTCTaGCTGAAGTCCTCCAAGATC +
Preference number: 5 (lower is better)
Translates to: KVAAVSILAPSTGSPTRRFGCCL*LKSSKI
Trigger: GATCTTGGAGGACTTCAGCAAGAGGCAGCAGCCAAA...CCGCCTGGTAGGAGAGCCTGTGCTGGGTGCCAAGATGGAGACAGCGGCTACCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR CAA 90 bp GCCGCAAATACGATGTCCCGCCGTAGCAAGGTAGCCGCTGTCTCCATCTTGGCATTGAGCTGCAGGTCATaGACAGGGTCGAGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: AANTMSRRSKVAAVSILALSCRS*TGSRVG
Trigger: TCCCACCCTCGACCCTGTCAATGACCTGCAGCTCAA...TGCCAAGATGGAGACAGCGGCTACCTTGCTACGGCGGGACATCGTATTTGCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS GCA 90 bp ACCTCACCAATCCGCTTGGCCACAGCCCGGACACGTTCTATTCCCTaGAGGAAAGAAGGAGAGGTTAAGGCCTGCCTTCCTGCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: TSPIRLATARTRSIP*RKEGEVKACLPAPG
Trigger: TCCTGGAGCAGGAAGGCAGGCCTTAACCTCTCCTTCTTTCCTGCAGGGAATAGAACGTGTCCGGGCTGTGGCCAAGCGGATTGGTGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000462557.5
ENST00000472288.5
ENST00000485243.5
ENST00000485349.5
ENST00000485471.5
ENST00000493433.1
CDS-3UTR CAA 90 bp GAGCGAAGGATCTCTGTGGTCATGATGAGGCAGGAGGCCTCCGGATGCAGCTGTGTATCTGGCCTGTGGTaGGGTGTCTTTGGGCCTGTA +
Preference number: 5 (lower is better)
Translates to: ERRISVVMMRQEASGCSCVSGLW*GVFGPV
Trigger: TACAGGCCCAAAGACACCCAACCACAGGCCAGATAC...ACAGCTGCATCCGGAGGCCTCCTGCCTCATCATGACCACAGAGATCCTTCGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461073.5
CDS-3UTR CAA 90 bp TTCCTGCAGATGTGTGAGCTGCGACAAAGACAGAGTCATGCCGTTCCAAGTGCAGGTCTTCCAAGCTGCTaGCTCGGGCCAGGGGAGCAC +
Preference number: 5 (lower is better)
Translates to: FLQMCELRQRQSHAVPSAGLPSC*LGPGEH
Trigger: GTGCTCCCCTGGCCCGAGCAAGCAGCTTGGAAGACC...TGCACTTGGAACGGCATGACTCTGTCTTTGTCGCAGCTCACACATCTGCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CAA 90 bp GGGGCATTCACTGGGTGTAGAGGCTGGCCGCAAATACGATGTCCCGCCGTAGCAGTGGAGCCATCGTGTTaGCGCATGGAGTCAAACACT +
Preference number: 5 (lower is better)
Translates to: GAFTGCRGWPQIRCPAVAVEPSC*RMESNT
Trigger: AGTGTTTGACTCCATGCGCAAACACGATGGCTCCAC...TGCTACGGCGGGACATCGTATTTGCGGCCAGCCTCTACACCCAGTGAATGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CAA 90 bp AGTGAGGAGCAACTCATGGCTGCTCATGGCACAAGCCACCCGCCCTGCCAGCTTTTTGGCTGCTGCCTCTaGCTGAAGTCCTCCAAGATC +
Preference number: 5 (lower is better)
Translates to: SEEQLMAAHGTSHPPCQLFGCCL*LKSSKI
Trigger: GATCTTGGAGGACTTCAGCAAGAGGCAGCAGCCAAA...AAGCTGGCAGGGCGGGTGGCTTGTGCCATGAGCAGCCATGAGTTGCTCCTCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR CAA 90 bp GGGGCATTCACTGGGTGTAGAGGCTGGCCGCAAATACGATGTCCCGCCGTAGCAAGGGGAGGATCCTTCTaGAATTTTGGCTGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: GAFTGCRGWPQIRCPAVARGGSF*NFGCCL
Trigger: GAGGCAGCAGCCAAAATTCAAGAAGGATCCTCCCCT...TGCTACGGCGGGACATCGTATTTGCGGCCAGCCTCTACACCCAGTGAATGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR CAA 90 bp CTGGTTGCTCAGGGCCTTGATGGGCGAAGTGTAGATGGTGCGTGTCATGTGTTTGCAAACTCAAGGGCGTaGGGGACGGTGGCACTCAGA +
Preference number: 5 (lower is better)
Translates to: LVAQGLDGRSVDGACHVFANSRA*GTVALR
Trigger: TCTGAGTGCCACCGTCCCCAACGCCCTTGAGTTTGC...AAACACATGACACGCACCATCTACACTTCGCCCATCAAGGCCCTGAGCAACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CAA 90 bp CTGTCCTGTGGGTCCTGGGACAAGGGCTTATCACACAAGACCAGGGTTGTGAATGCCTGTTCATGGGCCTaGCTGTCTTTGCGGGAGGGA +
Preference number: 5 (lower is better)
Translates to: LSCGSWDKGLSHKTRVVNACSWA*LSLREG
Trigger: TCCCTCCCGCAAAGACAGCAAGGCCCATGAACAGGC...ATTCACAACCCTGGTCTTGTGTGATAAGCCCTTGTCCCAGGACCCACAGGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CAA 90 bp TCCCAAACCTCAGGTACTCACCATGCCCCGGGCCCACTCATATACAACCTCAACTCTCCTGGCTGGAGCTaGACCACGGTGTGGTCACAA +
Preference number: 5 (lower is better)
Translates to: SQTSGTHHAPGPLIYNLNSPGWS*TTVWSQ
Trigger: TTGTGACCACACCGTGGTCAAGCTCCAGCCAGGAGA...GTTGAGGTTGTATATGAGTGGGCCCGGGGCATGGTGAGTACCTGAGGTTTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483553.5
CDS-3UTR CAA 90 bp GCAAATACGATGTCCCGCCGTAGCAAGGTAGCCGCTGTCTCCATCTTGGCACCCAGGGGAGGATCCTTCTaGAATTTTGGCTGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: ANTMSRRSKVAAVSILAPRGGSF*NFGCCL
Trigger: GAGGCAGCAGCCAAAATTCAAGAAGGATCCTCCCCT...GGGTGCCAAGATGGAGACAGCGGCTACCTTGCTACGGCGGGACATCGTATTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS-3UTR CAA 90 bp TCTGTGGTCATGATGAGGCAGGAGGCCTCCGGATGCAGCTGTACATCCCCGGTGTGTGGACGCTTCCTTTaGGTGCAAAGTCCATGCCTT +
Preference number: 5 (lower is better)
Translates to: SVVMMRQEASGCSCTSPVCGRFL*VQSPCL
Trigger: AAGGCATGGACTTTGCACCAAAAGGAAGCGTCCACA...CACCGGGGATGTACAGCTGCATCCGGAGGCCTCCTGCCTCATCATGACCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461073.5
CDS GCA 90 bp TGGATACAGCTGTGGACGCTTCCTTCAACACTAGGTCTTCCAAGCTaGTTGCTCGGGCCAGGGGAGCACAAGTCGCTCTGTCTCCATCAT +
Preference number: 5 (lower is better)
Translates to: WIQLWTLPSTLGLPS*LLGPGEHKSLCLHH
Trigger: ATGATGGAGACAGAGCGACTTGTGCTCCCCTGGCCCGAGCAAGCAGCTTGGAAGACCTAGTGTTGAAGGAAGCGTCCACAGCTGTATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000465225.5
ENST00000473773.5
ENST00000477512.5
ENST00000484085.5
ENST00000487690.5
CDS CCA 90 bp TTGTGTTCTCCAGCAAGACCTCTTTGTAACCCAGTATCTGGCCTGTaGTTGGGTGTCTTTGGGCCTGTAGGTCGGATGGGACTGGGGCTC +
Preference number: 5 (lower is better)
Translates to: LCSPARPLCNPVSGL*LGVFGPVGRMGLGL
Trigger: GAGCCCCAGTCCCATCCGACCTACAGGCCCAAAGACACCCAACCACAGGCCAGATACTGGGTTACAAAGAGGTCTTGCTGGAGAACACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000375394.7
ENST00000383336.6
ENST00000412823.4
ENST00000421789.4
ENST00000429465.4
ENST00000448219.4
ENST00000460033.5
ENST00000461073.5
ENST00000465599.5
ENST00000465703.5
ENST00000476485.5
ENST00000476651.5
ENST00000488648.5
ENST00000490619.5
ENST00000490951.5
ENST00000491926.5
ENST00000492133.5
ENST00000496229.5
ENST00000497600.5
CDS CCA 90 bp TCCCTTTCTTCCCCTCAGACCCATCCTAGCCAGCCCACATCCTGGTaGCAAGGCTCTTTCTTGCCTCCACTACACAGAACCACCAACCTT +
Preference number: 5 (lower is better)
Translates to: SLSSPQTHPSQPTSW*QGSFLPPLHRTTNL
Trigger: AAGGTTGGTGGTTCTGTGTAGTGGAGGCAAGAAAGAGCCTTGCCACCAGGATGTGGGCTGGCTAGGATGGGTCTGAGGGGAAGAAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000465599.5
ENST00000465703.5
ENST00000476485.5
ENST00000491926.5
ENST00000496229.5
ENST00000497600.5
CDS CCA 90 bp ATGTCCCTTTCTTCCCCTCAGACCCATCCTAGCCAGCCCACATCCTaGTGGCAAGGCTCTTTCTTGCCTCCACTACACAGAACCACCAAC +
Preference number: 5 (lower is better)
Translates to: MSLSSPQTHPSQPTS*WQGSFLPPLHRTTN
Trigger: GTTGGTGGTTCTGTGTAGTGGAGGCAAGAAAGAGCCTTGCCACCAGGATGTGGGCTGGCTAGGATGGGTCTGAGGGGAAGAAAGGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000465599.5
ENST00000465703.5
ENST00000476485.5
ENST00000491926.5
ENST00000496229.5
ENST00000497600.5
CDS-3UTR CAA 90 bp GCAAATACGATGTCCCGCCGTAGCAAGGTAGCCGCTGTCTCCATCTTGGCACCCAAGGTCTGGGCGTGTTaGCTCATTCTCTCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: ANTMSRRSKVAAVSILAPKVWAC*LILSFL
Trigger: CAAGAAGGAGAGAATGAGCAAACACGCCCAGACCTT...GGGTGCCAAGATGGAGACAGCGGCTACCTTGCTACGGCGGGACATCGTATTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CAA 90 bp CTGTCCTGTGGGTCCTGGGACAAGGGCTTATCACACAAGACCAGGGTTGTGAATTCTCCTGGCTGGAGCTaGACCACGGTGTGGTCACAA +
Preference number: 5 (lower is better)
Translates to: LSCGSWDKGLSHKTRVVNSPGWS*TTVWSQ
Trigger: TTGTGACCACACCGTGGTCAAGCTCCAGCCAGGAGA...ATTCACAACCCTGGTCTTGTGTGATAAGCCCTTGTCCCAGGACCCACAGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS GCA 90 bp GAGGAGAAGGGCCTCCCTAGCATCTCTGACTTGAATTTTGGCTGCTaGCTCTTGCTGAAGTCCTCCAAGATCTTCTCCCCATTCACCCGG +
Preference number: 5 (lower is better)
Translates to: EEKGLPSISDLNFGC*LLLKSSKIFSPFTR
Trigger: CCGGGTGAATGGGGAGAAGATCTTGGAGGACTTCAGCAAGAGGCAGCAGCCAAAATTCAAGTCAGAGATGCTAGGGAGGCCCTTCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000461915.5
ENST00000463549.5
ENST00000467720.5
ENST00000473290.5
ENST00000473816.5
ENST00000479354.5
ENST00000480573.5
ENST00000486945.5
ENST00000488686.5
ENST00000494058.5
ENST00000494521.5
ENST00000496986.5
CDS-3UTR CAA 90 bp CACATCTGGCTCAAATGCCCACTGGAAGGCTGGCTGGGGAATGAGGCGATAGAACAACTGTTCTGCTTCTaGCTGCAGATCTGGGGCACA +
Preference number: 5 (lower is better)
Translates to: HIWLKCPLEGWLGNEAIEQLFCF*LQIWGT
Trigger: TGTGCCCCAGATCTGCAGCAAGAAGCAGAACAGTTG...TTCTATCGCCTCATTCCCCAGCCAGCCTTCCAGTGGGCATTTGAGCCAGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461073.5
CDS-3UTR CAA 90 bp ATTGTCAAACATGAGCTCAGTGAGGAGCAACTCATGGCTGCTCATGGCACAAGCAGGCAGGTCGACCAGTaGGCCAGTCATGTCAGGCTC +
Preference number: 5 (lower is better)
Translates to: IVKHELSEEQLMAAHGTSRQVDQ*ASHVRL
Trigger: GAGCCTGACATGACTGGCCAACTGGTCGACCTGCCT...GCTTGTGCCATGAGCAGCCATGAGTTGCTCCTCACTGAGCTCATGTTTGACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CAA 90 bp GGGTTCGGAGCACCTCTACTCGCTGATGGTACTCAGGAAGCAGCAGCAATGACTTCAGGCAGGAACAGCTaGAATCCCACGAGGTCATCT +
Preference number: 5 (lower is better)
Translates to: GFGAPLLADGTQEAAAMTSGRNS*NPTRSS
Trigger: AGATGACCTCGTGGGATTCAAGCTGTTCCTGCCTGA...AGTCATTGCTGCTGCTTCCTGAGTACCATCAGCGAGTAGAGGTGCTCCGAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS GCA 90 bp CTGGAGGAGAAGGGCCTCCCTAGCATCTCTGACTTGAATTTTGGCTaGTGCCTCTTGCTGAAGTCCTCCAAGATCTTCTCCCCATTCACC +
Preference number: 5 (lower is better)
Translates to: LEEKGLPSISDLNFG*CLLLKSSKIFSPFT
Trigger: GGTGAATGGGGAGAAGATCTTGGAGGACTTCAGCAAGAGGCAGCAGCCAAAATTCAAGTCAGAGATGCTAGGGAGGCCCTTCTCCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000461915.5
ENST00000463549.5
ENST00000467720.5
ENST00000473290.5
ENST00000473816.5
ENST00000479354.5
ENST00000480573.5
ENST00000486945.5
ENST00000488686.5
ENST00000494058.5
ENST00000494521.5
ENST00000496986.5
CDS-3UTR CAA 90 bp AAGACCTTGACCAGGCCACGGCTGAAGAGCATCTCCACGATCTCCTTGAGGATGGTCCAGGAGCTGGAGTaGGACAATCTTTTGGTGCAA +
Preference number: 5 (lower is better)
Translates to: KTLTRPRLKSISTISLRMVQELE*DNLLVQ
Trigger: TTGCACCAAAAGATTGTCCAACTCCAGCTCCTGGAC...CATCCTCAAGGAGATCGTGGAGATGCTCTTCAGCCGTGGCCTGGTCAAGGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CAA 90 bp CGCATGGAGTCAAACACTACTGTACGAGCAGGCATGTTTACTCCCATGGCAAAGTTCACCCGGAGCACCTaGGTGGTGATGGCAGCCATA +
Preference number: 5 (lower is better)
Translates to: RMESNTTVRAGMFTPMAKFTRST*VVMAAI
Trigger: TATGGCTGCCATCACCACCAAGGTGCTCCGGGTGAA...CTTTGCCATGGGAGTAAACATGCCTGCTCGTACAGTAGTGTTTGACTCCATGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CAA 90 bp CCGCTTGGCCACAGCCCGGACACGTTCTATTCCCTGCTTGAGGGTGTTTGGGAGACAACTGACATATCTTaGAGCTGCAGGTCATTGACA +
Preference number: 5 (lower is better)
Translates to: PLGHSPDTFYSLLEGVWETTDIS*SCRSLT
Trigger: TGTCAATGACCTGCAGCTCAAAGATATGTCAGTTGT...CTCCCAAACACCCTCAAGCAGGGAATAGAACGTGTCCGGGCTGTGGCCAAGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS TCA 90 bp AGGCACAGGATTCCATATGGGGGTAAAGAAAGCAGTAAGGGGCCCTaGGTGTGTGGAATAAGGGAGACGCTCAACTGGTCCCAAAGGAGA +
Preference number: 5 (lower is better)
Translates to: RHRIPYGGKESSKGP*VCGIRETLNWSQRR
Trigger: TCTCCTTTGGGACCAGTTGAGCGTCTCCCTTATTCCACACACTCAGGGCCCCTTACTGCTTTCTTTACCCCCATATGGAATCCTGTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000465599.5
ENST00000465703.5
ENST00000476485.5
ENST00000491926.5
ENST00000496229.5
ENST00000497600.5
CDS-3UTR CAA 90 bp TCATGTTTTTACATGGGGCATTCACTGGGTGTAGAGGCTGGCCGCAAATACGATTTGAGCTGCAGGTCATaGACAGGGTCGAGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: SCFYMGHSLGVEAGRKYDLSCRS*TGSRVG
Trigger: TCCCACCCTCGACCCTGTCAATGACCTGCAGCTCAA...ATCGTATTTGCGGCCAGCCTCTACACCCAGTGAATGCCCCATGTAAAAACATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474839.5
ENST00000483553.5
CDS CCA 90 bp AAAGGTTGGAGGCTCAAAGCCTATCATCTCAGTCACCAAGTGCCCTaGTGCTTGGATACAGAAGGGAGCTCCACGGAGAAATGCCACATT +
Preference number: 5 (lower is better)
Translates to: KGWRLKAYHLSHQVP*CLDTEGSSTEKCHI
Trigger: AATGTGGCATTTCTCCGTGGAGCTCCCTTCTGTATCCAAGCACCAGGGCACTTGGTGACTGAGATGATAGGCTTTGAGCCTCCAACCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000476793.1
ENST00000482606.1
ENST00000488599.1
ENST00000492290.1
ENST00000492900.1
ENST00000494416.1
CDS-3UTR CAA 90 bp CGAAGGATCTCTGTGGTCATGATGAGGCAGGAGGCCTCCGGATGCAGCTGTACAAAGTCCATGCCTTTCTaGAAACCAGGTGGAATAGTA +
Preference number: 5 (lower is better)
Translates to: RRISVVMMRQEASGCSCTKSMPF*KPGGIV
Trigger: TACTATTCCACCTGGTTTCAAGAAAGGCATGGACTT...TGTACAGCTGCATCCGGAGGCCTCCTGCCTCATCATGACCACAGAGATCCTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461073.5
ENST00000474839.5
CDS-3UTR CAA 90 bp ATGGAAGGCTCCTCGGGAGTCCAGCAACAAAAAGAGCTCCCCCTGGGTCTTGGAAAGTCCATGCCTTTCTaGAAACCAGGTGGAATAGTA +
Preference number: 5 (lower is better)
Translates to: MEGSSGVQQQKELPLGLGKSMPF*KPGGIV
Trigger: TACTATTCCACCTGGTTTCAAGAAAGGCATGGACTT...TCCAAGACCCAGGGGGAGCTCTTTTTGTTGCTGGACTCCCGAGGAGCCTTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CAA 90 bp CGACAAAGACAGAGTCATGCCGTTCCAAGTGCAGGATGGCCTGTTTCTGAAACACTGCATAGTACCCTTTaGTATGGAAGGCTCCTCGGG +
Preference number: 5 (lower is better)
Translates to: RQRQSHAVPSAGWPVSETLHSTL*YGRLLG
Trigger: CCCGAGGAGCCTTCCATACAAAAGGGTACTATGCAG...TGTTTCAGAAACAGGCCATCCTGCACTTGGAACGGCATGACTCTGTCTTTGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CAA 90 bp CTGTTTCTGAAACACATCTGGCTCAAATGCCCACTGGAAGGCTGGCTGGGGAATTCCACTCGCAGCAAGTaGAGGATCATAGTGTACGTG +
Preference number: 5 (lower is better)
Translates to: LFLKHIWLKCPLEGWLGNSTRSK*RIIVYV
Trigger: CACGTACACTATGATCCTCAACTTGCTGCGAGTGGA...ATTCCCCAGCCAGCCTTCCAGTGGGCATTTGAGCCAGATGTGTTTCAGAAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS-3UTR CAA 90 bp CGAAGGATCTCTGTGGTCATGATGAGGCAGGAGGCCTCCGGATGCAGCTGTACAACAACTGACATATCTTaGAGCTGCAGGTCATTGACA +
Preference number: 5 (lower is better)
Translates to: RRISVVMMRQEASGCSCTTTDIS*SCRSLT
Trigger: TGTCAATGACCTGCAGCTCAAAGATATGTCAGTTGT...TGTACAGCTGCATCCGGAGGCCTCCTGCCTCATCATGACCACAGAGATCCTTCG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS GCA 90 bp AAGCTAGATCCTACTGTGAGGAGGGTGAAGGAGGTTTGGACTCAATaGGGGTCAAAGGTTAGGGTCAAAAGTCACTCACGCTACTCTCTG +
Preference number: 5 (lower is better)
Translates to: KLDPTVRRVKEVWTQ*GSKVRVKSHSRYSL
Trigger: CAGAGAGTAGCGTGAGTGACTTTTGACCCTAACCTTTGACCCGCATTGAGTCCAAACCTCCTTCACCCTCCTCACAGTAGGATCTAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000476793.1
ENST00000482606.1
ENST00000488599.1
ENST00000492290.1
ENST00000492900.1
ENST00000494416.1
CDS-3UTR CAA 90 bp AGCTGCGACAAAGACAGAGTCATGCCGTTCCAAGTGCAGGATGGCCTGTTTCTGAGAAGGGATACTGAGTaGGATTTCCCCATAAGGACT +
Preference number: 5 (lower is better)
Translates to: SCDKDRVMPFQVQDGLFLRRDTE*DFPIRT
Trigger: AGTCCTTATGGGGAAATCCAACTCAGTATCCCTTCT...CAGAAACAGGCCATCCTGCACTTGGAACGGCATGACTCTGTCTTTGTCGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461073.5
CDS-3UTR CAA 90 bp AGCTGCGACAAAGACAGAGTCATGCCGTTCCAAGTGCAGGATGGCCTGTTTCTGGAGTTGGACAATCTTTaGGTGCAAAGTCCATGCCTT +
Preference number: 5 (lower is better)
Translates to: SCDKDRVMPFQVQDGLFLELDNL*VQSPCL
Trigger: AAGGCATGGACTTTGCACCAAAAGATTGTCCAACTC...CAGAAACAGGCCATCCTGCACTTGGAACGGCATGACTCTGTCTTTGTCGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474839.5
CDS TCA 90 bp TGGTGCTTGGATACAGAAGGGAGCTCCACGGAGAAATGCCACATTTaGAAGAGCAGCTCTCAAAGCAAAAATATCCCCAGCCCTTTCTGC +
Preference number: 5 (lower is better)
Translates to: WCLDTEGSSTEKCHI*KSSSQSKNIPSPFC
Trigger: GCAGAAAGGGCTGGGGATATTTTTGCTTTGAGAGCTGCTCTTTCAAATGTGGCATTTCTCCGTGGAGCTCCCTTCTGTATCCAAGCACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000476793.1
ENST00000482606.1
ENST00000488599.1
ENST00000492290.1
ENST00000492900.1
ENST00000494416.1
CDS CCA 90 bp AACAAGGTTAAGCTAGATCCTACTGTGAGGAGGGTGAAGGAGGTTTaGACTCAATGCGGGTCAAAGGTTAGGGTCAAAAGTCACTCACGC +
Preference number: 5 (lower is better)
Translates to: NKVKLDPTVRRVKEV*TQCGSKVRVKSHSR
Trigger: GCGTGAGTGACTTTTGACCCTAACCTTTGACCCGCATTGAGTCCAAACCTCCTTCACCCTCCTCACAGTAGGATCTAGCTTAACCTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000476793.1
ENST00000482606.1
ENST00000488599.1
ENST00000492290.1
ENST00000492900.1
ENST00000494416.1
CDS GCA 72 bp GCTGCCTGGCAGCCCGGAAGTGCGGCAAGTAGTCGCTaGGAAGTAAGCCCCGCCCCGGAACGGGCGGAAGTA +
Preference number: 6 (lower is better)
Translates to: AAWQPGSAASSR*EVSPAPERAEV
Trigger: TACTTCCGCCCGTTCCGGGGCGGGGCTTACTTCGCAGCGACTACTTGCCGCACTTCCGGGCTGCCAGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383336.6
ENST00000412823.4
ENST00000421789.4
ENST00000429465.4
ENST00000448219.4
CDS GCA 72 bp GAGCTCCAGGCAAGTTCAGCAGCTCCCAGTGCCCCGTaGATCCGAGCTCCACGGCCCGAAGGGGTAGGTCCA +
Preference number: 6 (lower is better)
Translates to: ELQASSAAPSAP*IRAPRPEGVGP
Trigger: TGGACCTACCCCTTCGGGCCGTGGAGCTCGGATGCACGGGGCACTGGGAGCTGCTGAACTTGCCTGGAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 32 transcripts:
ENST00000375394.7
ENST00000383336.6
ENST00000412823.4
ENST00000421789.4
ENST00000429465.4
ENST00000448219.4
ENST00000460033.5
ENST00000461073.5
ENST00000465599.5
ENST00000465703.5
ENST00000474839.5
ENST00000476485.5
ENST00000476651.5
ENST00000476793.1
ENST00000482606.1
ENST00000488599.1
ENST00000488648.5
ENST00000490619.5
ENST00000490951.5
ENST00000491926.5
ENST00000492133.5
ENST00000492290.1
ENST00000492900.1
ENST00000494416.1
ENST00000496229.5
ENST00000497600.5
ENST00000626050.1
ENST00000626668.1
ENST00000627011.1
ENST00000627041.1
ENST00000627683.1
ENST00000628157.1
CDS GCA 72 bp CTCTCTGGAGCTCCAGGCAAGTTCAGCAGCTCCCAGTaGCCCGTGCATCCGAGCTCCACGGCCCGAAGGGGT +
Preference number: 6 (lower is better)
Translates to: LSGAPGKFSSSQ*PVHPSSTARRG
Trigger: ACCCCTTCGGGCCGTGGAGCTCGGATGCACGGGGCACTGGGAGCTGCTGAACTTGCCTGGAGCTCCAGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 32 transcripts:
ENST00000375394.7
ENST00000383336.6
ENST00000412823.4
ENST00000421789.4
ENST00000429465.4
ENST00000448219.4
ENST00000460033.5
ENST00000461073.5
ENST00000465599.5
ENST00000465703.5
ENST00000474839.5
ENST00000476485.5
ENST00000476651.5
ENST00000476793.1
ENST00000482606.1
ENST00000488599.1
ENST00000488648.5
ENST00000490619.5
ENST00000490951.5
ENST00000491926.5
ENST00000492133.5
ENST00000492290.1
ENST00000492900.1
ENST00000494416.1
ENST00000496229.5
ENST00000497600.5
ENST00000626050.1
ENST00000626668.1
ENST00000627011.1
ENST00000627041.1
ENST00000627683.1
ENST00000628157.1
CDS CAA 90 bp CCCGCAGCTTCAGGTACTGCAGAGAGCCACCCGTCAGCCTTCTCCTaGCCCCTTAGCAGGGGTGCACTGAGGACAAGGGCTGGGCAGGAA +
Preference number: 6 (lower is better)
Translates to: PAASGTAESHPSAFS*PLSRGALRTRAGQE
Trigger: TTCCTGCCCAGCCCTTGTCCTCAGTGCACCCCTGCTAAGGGGCAAGGAGAAGGCTGACGGGTGGCTCTCTGCAGTACCTGAAGCTGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000461360.5
ENST00000465599.5
ENST00000465703.5
ENST00000466463.5
ENST00000471547.5
ENST00000476338.5
ENST00000476485.5
ENST00000480914.5
ENST00000483553.5
ENST00000491926.5
ENST00000496229.5
ENST00000497600.5
CDS GCA 72 bp CAGACGCAGCAGTTCCTGGACAGCAGTGGTCACGGCTaGAAGGGGAGGATCCTTCCCCTCTGGAGGAGAAGG +
Preference number: 6 (lower is better)
Translates to: QTQQFLDSSGHG*KGRILPLWRRR
Trigger: CCTTCTCCTCCAGAGGGGAAGGATCCTCCCCTTGCAGCCGTGACCACTGCTGTCCAGGAACTGCTGCGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461915.5
CDS CCA 72 bp CTCTGTCTCCATCATCCTGGAGCCACAGCAGCTGCCTaGCAGCCCGGAAGTGCGGCAAGTAGTCGCTGCGAA +
Preference number: 6 (lower is better)
Translates to: LCLHHPGATAAA*QPGSAASSRCE
Trigger: TTCGCAGCGACTACTTGCCGCACTTCCGGGCTGCCAGGCAGCTGCTGTGGCTCCAGGATGATGGAGACAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000383336.6
ENST00000412823.4
ENST00000421789.4
ENST00000429465.4
ENST00000448219.4
ENST00000460033.5
ENST00000476651.5
ENST00000488648.5
ENST00000490619.5
ENST00000490951.5
ENST00000492133.5
CDS GCA 72 bp CAACTCATGGCTGCTCATGGCACAAGCCACCCGCCCTaGCAGCTTCACAGTGCCCGCCCTCTACAACTGACA +
Preference number: 6 (lower is better)
Translates to: QLMAAHGTSHPP*QLHSARPLQLT
Trigger: TGTCAGTTGTAGAGGGCGGGCACTGTGAAGCTGGCAGGGCGGGTGGCTTGTGCCATGAGCAGCCATGAGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464568.5
ENST00000471818.1
ENST00000479139.5
ENST00000485285.5
ENST00000487359.5
ENST00000496789.1
CDS CCA 72 bp TCAGGCCACAAGCCACCTGGACCTCACCAATCCGCTTaGCCACAGCCCGGACACGTTCTATTCCCTGCAGGA +
Preference number: 6 (lower is better)
Translates to: SGHKPPGPHQSA*PQPGHVLFPAG
Trigger: TCCTGCAGGGAATAGAACGTGTCCGGGCTGTGGCCAAGCGGATTGGTGAGGTCCAGGTGGCTTGTGGCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000462557.5
ENST00000472288.5
ENST00000485243.5
ENST00000485349.5
ENST00000485471.5
ENST00000493433.1
CDS CAA 72 bp TCAGGTACTGCAGAGAGCCACCCGTCAGCCTTCTCCTaGCCCCTTAGCAGGGGTGCACTGAGGACAAGGGCT +
Preference number: 6 (lower is better)
Translates to: SGTAESHPSAFS*PLSRGALRTRA
Trigger: AGCCCTTGTCCTCAGTGCACCCCTGCTAAGGGGCAAGGAGAAGGCTGACGGGTGGCTCTCTGCAGTACCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000461360.5
ENST00000465599.5
ENST00000465703.5
ENST00000466463.5
ENST00000471547.5
ENST00000476338.5
ENST00000476485.5
ENST00000480914.5
ENST00000483553.5
ENST00000491926.5
ENST00000496229.5
ENST00000497600.5
CDS CAA 72 bp TTCAGGCCACAAGCCACCTGGACCTCACCAATCCGCTaGGCCACAGCCCGGACACGTTCTATTCCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: FRPQATWTSPIR*ATARTRSIPCR
Trigger: CCTGCAGGGAATAGAACGTGTCCGGGCTGTGGCCAAGCGGATTGGTGAGGTCCAGGTGGCTTGTGGCCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000462557.5
ENST00000472288.5
ENST00000485243.5
ENST00000485349.5
ENST00000485471.5
ENST00000493433.1
CDS GCA 72 bp CAGACGCAGCAGTTCCTGGACAGCAGTGGTCACGGCTaGAAGGGGAGGATCCTTCCTGAAGAGGGAGCAGAT +
Preference number: 6 (lower is better)
Translates to: QTQQFLDSSGHG*KGRILPEEGAD
Trigger: ATCTGCTCCCTCTTCAGGAAGGATCCTCCCCTTGCAGCCGTGACCACTGCTGTCCAGGAACTGCTGCGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000463549.5
ENST00000467720.5
ENST00000479354.5
ENST00000480573.5
ENST00000494058.5
ENST00000494521.5
CDS CAA 90 bp ACCGTCTGGTTCAGGCCACAAGCCACCTGGACCTCACCAATCCGCTaGGCCACAGCCCGGACACGTTCTATTCCCTGCAGGAAAGAAGGA +
Preference number: 6 (lower is better)
Translates to: TVWFRPQATWTSPIR*ATARTRSIPCRKEG
Trigger: TCCTTCTTTCCTGCAGGGAATAGAACGTGTCCGGGCTGTGGCCAAGCGGATTGGTGAGGTCCAGGTGGCTTGTGGCCTGAACCAGACGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000462557.5
ENST00000472288.5
ENST00000485243.5
ENST00000485349.5
ENST00000485471.5
ENST00000493433.1
CDS GCA 72 bp TTCTGTATCTGCATTCGCTCCCGCAGCTTCAGGTACTaGAGAGAGCCACCCGTCAGCCTTCTCCTTGCCCCT +
Preference number: 6 (lower is better)
Translates to: FCICIRSRSFRY*REPPVSLLLAP
Trigger: AGGGGCAAGGAGAAGGCTGACGGGTGGCTCTCTGCAGTACCTGAAGCTGCGGGAGCGAATGCAGATACAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000461360.5
ENST00000465599.5
ENST00000465703.5
ENST00000466463.5
ENST00000471547.5
ENST00000476338.5
ENST00000476485.5
ENST00000480914.5
ENST00000483553.5
ENST00000491926.5
ENST00000496229.5
ENST00000497600.5
CDS GCA 72 bp CTGTGGACGCTTCCTTCAACACTAGGTCTTCCAAGCTaGTTGCTCGGGCCAGGGGAGCACAAGTCGCTCTGT +
Preference number: 6 (lower is better)
Translates to: LWTLPSTLGLPS*LLGPGEHKSLC
Trigger: ACAGAGCGACTTGTGCTCCCCTGGCCCGAGCAAGCAGCTTGGAAGACCTAGTGTTGAAGGAAGCGTCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000465225.5
ENST00000473773.5
ENST00000477512.5
ENST00000484085.5
ENST00000487690.5
CDS GCA 72 bp CAGTGCCCGCCCTCTACAACTGACATATCTTTGAGCTaGAGGTCATTGACAGGGTCGAGGGTGGGAGGTCCG +
Preference number: 6 (lower is better)
Translates to: QCPPSTTDISLS*RSLTGSRVGGP
Trigger: CGGACCTCCCACCCTCGACCCTGTCAATGACCTGCAGCTCAAAGATATGTCAGTTGTAGAGGGCGGGCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464568.5
ENST00000471818.1
ENST00000479139.5
ENST00000485285.5
ENST00000487359.5
ENST00000496789.1
CDS CCA 72 bp TCCCCTCAGACCCATCCTAGCCAGCCCACATCCTGGTaGCAAGGCTCTTTCTTGCCTCCACTACACAGAACC +
Preference number: 6 (lower is better)
Translates to: SPQTHPSQPTSW*QGSFLPPLHRT
Trigger: GGTTCTGTGTAGTGGAGGCAAGAAAGAGCCTTGCCACCAGGATGTGGGCTGGCTAGGATGGGTCTGAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000465599.5
ENST00000465703.5
ENST00000476485.5
ENST00000491926.5
ENST00000496229.5
ENST00000497600.5
CDS CAA 90 bp TGTTCTCCAGCAAGACCTCTTTGTAACCCAGTATCTGGCCTGTGGTaGGGTGTCTTTGGGCCTGTAGGTCGGATGGGACTGGGGCTCCCA +
Preference number: 6 (lower is better)
Translates to: CSPARPLCNPVSGLW*GVFGPVGRMGLGLP
Trigger: TGGGAGCCCCAGTCCCATCCGACCTACAGGCCCAAAGACACCCAACCACAGGCCAGATACTGGGTTACAAAGAGGTCTTGCTGGAGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000375394.7
ENST00000383336.6
ENST00000412823.4
ENST00000421789.4
ENST00000429465.4
ENST00000448219.4
ENST00000460033.5
ENST00000461073.5
ENST00000465599.5
ENST00000465703.5
ENST00000476485.5
ENST00000476651.5
ENST00000488648.5
ENST00000490619.5
ENST00000490951.5
ENST00000491926.5
ENST00000492133.5
ENST00000496229.5
ENST00000497600.5
CDS GCA 72 bp CAGGCTGGGGATGACAGAAACAACTGTTCTGCTTCTTaGTGCAGATCTGGGGCACAAGGAGGGAGGCCATGG +
Preference number: 6 (lower is better)
Translates to: QAGDDRNNCSAS*CRSGAQGGRPW
Trigger: CCATGGCCTCCCTCCTTGTGCCCCAGATCTGCAGCAAGAAGCAGAACAGTTGTTTCTGTCATCCCCAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENST00000375394.7
ENST00000383336.6
ENST00000412823.4
ENST00000421789.4
ENST00000429465.4
ENST00000448219.4
ENST00000460033.5
ENST00000461073.5
ENST00000465599.5
ENST00000465703.5
ENST00000476485.5
ENST00000476651.5
ENST00000488648.5
ENST00000490619.5
ENST00000490951.5
ENST00000491926.5
ENST00000492133.5
ENST00000496229.5
ENST00000497600.5
CDS CCA 72 bp CCAGCAAGACCTCTTTGTAACCCAGTATCTGGCCTGTaGTTGGGTGTCTTTGGGCCTGTAGGTCGGATGGGA +
Preference number: 6 (lower is better)
Translates to: PARPLCNPVSGL*LGVFGPVGRMG
Trigger: TCCCATCCGACCTACAGGCCCAAAGACACCCAACCACAGGCCAGATACTGGGTTACAAAGAGGTCTTGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000375394.7
ENST00000383336.6
ENST00000412823.4
ENST00000421789.4
ENST00000429465.4
ENST00000448219.4
ENST00000460033.5
ENST00000461073.5
ENST00000465599.5
ENST00000465703.5
ENST00000476485.5
ENST00000476651.5
ENST00000488648.5
ENST00000490619.5
ENST00000490951.5
ENST00000491926.5
ENST00000492133.5
ENST00000496229.5
ENST00000497600.5
CDS CAA 72 bp GCTTCACAGTGCCCGCCCTCTACAACTGACATATCTTaGAGCTGCAGGTCATTGACAGGGTCGAGGGTGGGA +
Preference number: 6 (lower is better)
Translates to: ASQCPPSTTDIS*SCRSLTGSRVG
Trigger: TCCCACCCTCGACCCTGTCAATGACCTGCAGCTCAAAGATATGTCAGTTGTAGAGGGCGGGCACTGTGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464568.5
ENST00000471818.1
ENST00000479139.5
ENST00000485285.5
ENST00000487359.5
ENST00000496789.1
CDS CAA 90 bp AAGGGCCTCCCTAGCATCTCTGACTTGAATTTTGGCTGCTGCCTCTaGCTGAAGTCCTCCAAGATCTTCTCCCCATTCACCCGGAGCACC +
Preference number: 6 (lower is better)
Translates to: KGLPSISDLNFGCCL*LKSSKIFSPFTRST
Trigger: GGTGCTCCGGGTGAATGGGGAGAAGATCTTGGAGGACTTCAGCAAGAGGCAGCAGCCAAAATTCAAGTCAGAGATGCTAGGGAGGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000461915.5
ENST00000463549.5
ENST00000467720.5
ENST00000473290.5
ENST00000473816.5
ENST00000479354.5
ENST00000480573.5
ENST00000486945.5
ENST00000488686.5
ENST00000494058.5
ENST00000494521.5
ENST00000496986.5
CDS CAA 90 bp CTACGTGCCCCTCTGGAGGAGAAGGGCCTCCCTAGCATCTCTGACTaGAATTTTGGCTGCTGCCTCTTGCTGAAGTCCTCCAAGATCTTC +
Preference number: 6 (lower is better)
Translates to: LRAPLEEKGLPSISD*NFGCCLLLKSSKIF
Trigger: GAAGATCTTGGAGGACTTCAGCAAGAGGCAGCAGCCAAAATTCAAGTCAGAGATGCTAGGGAGGCCCTTCTCCTCCAGAGGGGCACGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000463549.5
ENST00000467720.5
ENST00000479354.5
ENST00000480573.5
ENST00000494058.5
ENST00000494521.5
CDS CAA 90 bp GATCGTGCCCCTCTGGAGGAGAAGGGCCTCCCTAGCATCTCTGACTaGAATTTTGGCTGCTGCCTCTTGCTGAAGTCCTCCAAGATCTTC +
Preference number: 6 (lower is better)
Translates to: DRAPLEEKGLPSISD*NFGCCLLLKSSKIF
Trigger: GAAGATCTTGGAGGACTTCAGCAAGAGGCAGCAGCCAAAATTCAAGTCAGAGATGCTAGGGAGGCCCTTCTCCTCCAGAGGGGCACGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000473290.5
ENST00000473816.5
ENST00000486945.5
ENST00000488686.5
ENST00000496986.5
CDS CAA 90 bp GATCCTTCCCCTCTGGAGGAGAAGGGCCTCCCTAGCATCTCTGACTaGAATTTTGGCTGCTGCCTCTTGCTGAAGTCCTCCAAGATCTTC +
Preference number: 6 (lower is better)
Translates to: DPSPLEEKGLPSISD*NFGCCLLLKSSKIF
Trigger: GAAGATCTTGGAGGACTTCAGCAAGAGGCAGCAGCCAAAATTCAAGTCAGAGATGCTAGGGAGGCCCTTCTCCTCCAGAGGGGAAGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461915.5
CDS GCA 72 bp GGCCTCCCTAGCATCTCTGACTTGAATTTTGGCTGCTaGCTCTTGCTGAAGTCCTCCAAGATCTTCTCCCCA +
Preference number: 6 (lower is better)
Translates to: GLPSISDLNFGC*LLLKSSKIFSP
Trigger: TGGGGAGAAGATCTTGGAGGACTTCAGCAAGAGGCAGCAGCCAAAATTCAAGTCAGAGATGCTAGGGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000461915.5
ENST00000463549.5
ENST00000467720.5
ENST00000473290.5
ENST00000473816.5
ENST00000479354.5
ENST00000480573.5
ENST00000486945.5
ENST00000488686.5
ENST00000494058.5
ENST00000494521.5
ENST00000496986.5
CDS GCA 72 bp CCTACTGTGAGGAGGGTGAAGGAGGTTTGGACTCAATaGGGGTCAAAGGTTAGGGTCAAAAGTCACTCACGC +
Preference number: 6 (lower is better)
Translates to: PTVRRVKEVWTQ*GSKVRVKSHSR
Trigger: GCGTGAGTGACTTTTGACCCTAACCTTTGACCCGCATTGAGTCCAAACCTCCTTCACCCTCCTCACAGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000476793.1
ENST00000482606.1
ENST00000488599.1
ENST00000492290.1
ENST00000492900.1
ENST00000494416.1
CDS GCA 72 bp CTCAAAGCCTATCATCTCAGTCACCAAGTGCCCTGGTaGTTGGATACAGAAGGGAGCTCCACGGAGAAATGC +
Preference number: 6 (lower is better)
Translates to: LKAYHLSHQVPW*LDTEGSSTEKC
Trigger: GCATTTCTCCGTGGAGCTCCCTTCTGTATCCAAGCACCAGGGCACTTGGTGACTGAGATGATAGGCTTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000476793.1
ENST00000482606.1
ENST00000488599.1
ENST00000492290.1
ENST00000492900.1
ENST00000494416.1
CDS CCA 72 bp AAGCCTATCATCTCAGTCACCAAGTGCCCTGGTGCTTaGATACAGAAGGGAGCTCCACGGAGAAATGCCACA +
Preference number: 6 (lower is better)
Translates to: KPIISVTKCPGA*IQKGAPRRNAT
Trigger: TGTGGCATTTCTCCGTGGAGCTCCCTTCTGTATCCAAGCACCAGGGCACTTGGTGACTGAGATGATAGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000476793.1
ENST00000482606.1
ENST00000488599.1
ENST00000492290.1
ENST00000492900.1
ENST00000494416.1
CDS CCA 72 bp AGGCTCAAAGCCTATCATCTCAGTCACCAAGTGCCCTaGTGCTTGGATACAGAAGGGAGCTCCACGGAGAAA +
Preference number: 6 (lower is better)
Translates to: RLKAYHLSHQVP*CLDTEGSSTEK
Trigger: TTTCTCCGTGGAGCTCCCTTCTGTATCCAAGCACCAGGGCACTTGGTGACTGAGATGATAGGCTTTGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000476793.1
ENST00000482606.1
ENST00000488599.1
ENST00000492290.1
ENST00000492900.1
ENST00000494416.1
CDS CAA 72 bp AAAGCCTATCATCTCAGTCACCAAGTGCCCTGGTGCTaGGATACAGAAGGGAGCTCCACGGAGAAATGCCAC +
Preference number: 6 (lower is better)
Translates to: KAYHLSHQVPWC*DTEGSSTEKCH
Trigger: GTGGCATTTCTCCGTGGAGCTCCCTTCTGTATCCAAGCACCAGGGCACTTGGTGACTGAGATGATAGGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000476793.1
ENST00000482606.1
ENST00000488599.1
ENST00000492290.1
ENST00000492900.1
ENST00000494416.1
CDS TCA 72 bp ATTCCATATGGGGGTAAAGAAAGCAGTAAGGGGCCCTaGGTGTGTGGAATAAGGGAGACGCTCAACTGGTCC +
Preference number: 6 (lower is better)
Translates to: IPYGGKESSKGP*VCGIRETLNWS
Trigger: GGACCAGTTGAGCGTCTCCCTTATTCCACACACTCAGGGCCCCTTACTGCTTTCTTTACCCCCATATGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000465599.5
ENST00000465703.5
ENST00000476485.5
ENST00000491926.5
ENST00000496229.5
ENST00000497600.5
CDS GCA 72 bp AAGGGCCTCCCTAGCATCTCTGACTTGAATTTTGGCTaGTGCCTCTTGCTGAAGTCCTCCAAGATCTTCTCC +
Preference number: 6 (lower is better)
Translates to: KGLPSISDLNFG*CLLLKSSKIFS
Trigger: GGAGAAGATCTTGGAGGACTTCAGCAAGAGGCAGCAGCCAAAATTCAAGTCAGAGATGCTAGGGAGGCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000461915.5
ENST00000463549.5
ENST00000467720.5
ENST00000473290.5
ENST00000473816.5
ENST00000479354.5
ENST00000480573.5
ENST00000486945.5
ENST00000488686.5
ENST00000494058.5
ENST00000494521.5
ENST00000496986.5
CDS CAA 72 bp CCTAGCATCTCTGACTTGAATTTTGGCTGCTGCCTCTaGCTGAAGTCCTCCAAGATCTTCTCCCCATTCACC +
Preference number: 6 (lower is better)
Translates to: PSISDLNFGCCL*LKSSKIFSPFT
Trigger: GGTGAATGGGGAGAAGATCTTGGAGGACTTCAGCAAGAGGCAGCAGCCAAAATTCAAGTCAGAGATGCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000461915.5
ENST00000463549.5
ENST00000467720.5
ENST00000473290.5
ENST00000473816.5
ENST00000479354.5
ENST00000480573.5
ENST00000486945.5
ENST00000488686.5
ENST00000494058.5
ENST00000494521.5
ENST00000496986.5
CDS CCA 72 bp AAGCTAGATCCTACTGTGAGGAGGGTGAAGGAGGTTTaGACTCAATGCGGGTCAAAGGTTAGGGTCAAAAGT +
Preference number: 6 (lower is better)
Translates to: KLDPTVRRVKEV*TQCGSKVRVKS
Trigger: ACTTTTGACCCTAACCTTTGACCCGCATTGAGTCCAAACCTCCTTCACCCTCCTCACAGTAGGATCTAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000476793.1
ENST00000482606.1
ENST00000488599.1
ENST00000492290.1
ENST00000492900.1
ENST00000494416.1
CDS CAA 90 bp TGCTCGGGCCAGGGGAGCACTTTTGGTGCAAAGTCCATGCCTTTCTaGAAACCAGGTGGAATAGTAAGAAGATCTTTCTCAAAGTCTATC +
Preference number: 6 (lower is better)
Translates to: CSGQGSTFGAKSMPF*KPGGIVRRSFSKSI
Trigger: GATAGACTTTGAGAAAGATCTTCTTACTATTCCACCTGGTTTCAAGAAAGGCATGGACTTTGCACCAAAAGTGCTCCCCTGGCCCGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000460033.5
ENST00000476651.5
ENST00000488648.5
ENST00000490619.5
ENST00000490951.5
ENST00000492133.5
CDS CAA 90 bp GGAGCTGGAGTTGGACAATCTTTTGGTGCAAAGTCCATGCCTTTCTaGAAACCAGGTGGAATAGTAAGAAGATGCTACTCTCTGGAGCTC +
Preference number: 6 (lower is better)
Translates to: GAGVGQSFGAKSMPF*KPGGIVRRCYSLEL
Trigger: GAGCTCCAGAGAGTAGCATCTTCTTACTATTCCACCTGGTTTCAAGAAAGGCATGGACTTTGCACCAAAAGATTGTCCAACTCCAGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000474839.5
ENST00000626050.1
ENST00000626668.1
ENST00000627011.1
ENST00000627041.1
ENST00000627683.1
ENST00000628157.1
CDS TCA 72 bp GATACAGAAGGGAGCTCCACGGAGAAATGCCACATTTaGAAGAGCAGCTCTCAAAGCAAAAATATCCCCAGC +
Preference number: 6 (lower is better)
Translates to: DTEGSSTEKCHI*KSSSQSKNIPS
Trigger: GCTGGGGATATTTTTGCTTTGAGAGCTGCTCTTTCAAATGTGGCATTTCTCCGTGGAGCTCCCTTCTGTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000476793.1
ENST00000482606.1
ENST00000488599.1
ENST00000492290.1
ENST00000492900.1
ENST00000494416.1
CDS CCA 72 bp TTAGAAAAAGGGGTCCCAGACCTAAGGATGAAAGGTTaGAGGCTCAAAGCCTATCATCTCAGTCACCAAGTG +
Preference number: 6 (lower is better)
Translates to: LEKGVPDLRMKG*RLKAYHLSHQV
Trigger: CACTTGGTGACTGAGATGATAGGCTTTGAGCCTCCAACCTTTCATCCTTAGGTCTGGGACCCCTTTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000476793.1
ENST00000482606.1
ENST00000488599.1
ENST00000492290.1
ENST00000492900.1
ENST00000494416.1
CDS CAA 72 bp ATGGCAGATGTGTCAAACAGACTAGGACAATCAGGCTaGGCCAAAAACTACCTGCTACTGAATTACCTGGGG +
Preference number: 6 (lower is better)
Translates to: MADVSNRLGQSG*AKNYLLLNYLG
Trigger: CCCCAGGTAATTCAGTAGCAGGTAGTTTTTGGCCAAGCCTGATTGTCCTAGTCTGTTTGACACATCTGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000476793.1
ENST00000482606.1
ENST00000488599.1
ENST00000492290.1
ENST00000492900.1
ENST00000494416.1
CDS CAA 90 bp GGCTTGGCCAAAAACTACCTGCTACTGAATTACCTGGGGCAGATTTaGGATTTCAGAAACATGGAGGCTGGACCTAGGAATGTGCATTTT +
Preference number: 6 (lower is better)
Translates to: GLAKNYLLLNYLGQI*DFRNMEAGPRNVHF
Trigger: AAAATGCACATTCCTAGGTCCAGCCTCCATGTTTCTGAAATCCAAAATCTGCCCCAGGTAATTCAGTAGCAGGTAGTTTTTGGCCAAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000476793.1
ENST00000482606.1
ENST00000488599.1
ENST00000492290.1
ENST00000492900.1
ENST00000494416.1
CDS CAA 72 bp TTTAGAAAAAGGGGTCCCAGACCTAAGGATGAAAGGTaGGAGGCTCAAAGCCTATCATCTCAGTCACCAAGT +
Preference number: 6 (lower is better)
Translates to: FRKRGPRPKDER*EAQSLSSQSPS
Trigger: ACTTGGTGACTGAGATGATAGGCTTTGAGCCTCCAACCTTTCATCCTTAGGTCTGGGACCCCTTTTTCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000476793.1
ENST00000482606.1
ENST00000488599.1
ENST00000492290.1
ENST00000492900.1
ENST00000494416.1
CDS CCA 72 bp TTTTGGTGCAAAGTCCATGCCTTTCTTGAAACCAGGTaGAATAGTAAGAAGATGCTACTCTCTGGAGCTCCA +
Preference number: 6 (lower is better)
Translates to: FWCKVHAFLETR*NSKKMLLSGAP
Trigger: TGGAGCTCCAGAGAGTAGCATCTTCTTACTATTCCACCTGGTTTCAAGAAAGGCATGGACTTTGCACCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000474839.5
ENST00000626050.1
ENST00000626668.1
ENST00000627011.1
ENST00000627041.1
ENST00000627683.1
ENST00000628157.1
CDS CAA 72 bp CAGGGGAGCACTTTTGGTGCAAAGTCCATGCCTTTCTaGAAACCAGGTGGAATAGTAAGAAGATCTTTCTCA +
Preference number: 6 (lower is better)
Translates to: QGSTFGAKSMPF*KPGGIVRRSFS
Trigger: TGAGAAAGATCTTCTTACTATTCCACCTGGTTTCAAGAAAGGCATGGACTTTGCACCAAAAGTGCTCCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000460033.5
ENST00000476651.5
ENST00000488648.5
ENST00000490619.5
ENST00000490951.5
ENST00000492133.5
CDS CAA 72 bp TGGACGCTTCCTTTTGGTGCAAAGTCCATGCCTTTCTaGAAACCAGGTGGAATAGTAAGAAGATCTTTCTCA +
Preference number: 6 (lower is better)
Translates to: WTLPFGAKSMPF*KPGGIVRRSFS
Trigger: TGAGAAAGATCTTCTTACTATTCCACCTGGTTTCAAGAAAGGCATGGACTTTGCACCAAAAGGAAGCGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461073.5
CDS CAA 90 bp GGAGCTGGAGTTGGACAATCTTTTGGTGCAAAGTCCATGCCTTTCTaGAAACCAGGTGGAATAGTAAGAAGATCTTTCTCAAAGTCTATC +
Preference number: 6 (lower is better)
Translates to: GAGVGQSFGAKSMPF*KPGGIVRRSFSKSI
Trigger: GATAGACTTTGAGAAAGATCTTCTTACTATTCCACCTGGTTTCAAGAAAGGCATGGACTTTGCACCAAAAGATTGTCCAACTCCAGCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375394.7
ENST00000383336.6
ENST00000412823.4
ENST00000421789.4
ENST00000429465.4
ENST00000448219.4
CDS CAA 90 bp ATACAGCTGTGGACGCTTCCTTTTGGTGCAAAGTCCATGCCTTTCTaGAAACCAGGTGGAATAGTAAGAAGATCTTTCTCAAAGTCTATC +
Preference number: 6 (lower is better)
Translates to: IQLWTLPFGAKSMPF*KPGGIVRRSFSKSI
Trigger: GATAGACTTTGAGAAAGATCTTCTTACTATTCCACCTGGTTTCAAGAAAGGCATGGACTTTGCACCAAAAGGAAGCGTCCACAGCTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461073.5
CDS CAA 72 bp GTTGGACAATCTTTTGGTGCAAAGTCCATGCCTTTCTaGAAACCAGGTGGAATAGTAAGAAGATGCTACTCT +
Preference number: 6 (lower is better)
Translates to: VGQSFGAKSMPF*KPGGIVRRCYS
Trigger: AGAGTAGCATCTTCTTACTATTCCACCTGGTTTCAAGAAAGGCATGGACTTTGCACCAAAAGATTGTCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000474839.5
ENST00000626050.1
ENST00000626668.1
ENST00000627011.1
ENST00000627041.1
ENST00000627683.1
ENST00000628157.1
CDS CAA 72 bp GTTGGACAATCTTTTGGTGCAAAGTCCATGCCTTTCTaGAAACCAGGTGGAATAGTAAGAAGATCTTTCTCA +
Preference number: 6 (lower is better)
Translates to: VGQSFGAKSMPF*KPGGIVRRSFS
Trigger: TGAGAAAGATCTTCTTACTATTCCACCTGGTTTCAAGAAAGGCATGGACTTTGCACCAAAAGATTGTCCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375394.7
ENST00000383336.6
ENST00000412823.4
ENST00000421789.4
ENST00000429465.4
ENST00000448219.4