RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SKIDA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000180592

Ensembl transcript IDs: ENST00000444772.3, ENST00000449193.7, ENST00000487107.1, ENST00000633225.1

Found 435 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTCTTGGTTGTATTTACTGATTTGTCACTATCAAGAGTTCGGCCATaGAATATTCTGCTATTACGAGAAATATTTCAGCCCGGGCATGGT +
Preference number: 1 (lower is better)
Translates to: FLVVFTDLSLSRVRP*NILLLREIFQPGHG
Trigger: ACCATGCCCGGGCTGAAATATTTCTCGTAATAGCAGAATATTTCATGGCCGAACTCTTGATAGTGACAAATCAGTAAATACAACCAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
3UTR-3UTR TCA 90 bp AAGAGTTCGGCCATGAAATATTCTGCTATTACGAGAAATATTTCAGCCCGGGCATTTATTTGTAGCAGTTaGATTGAGGTACCGGGTGCA +
Preference number: 2 (lower is better)
Translates to: KSSAMKYSAITRNISARAFICSS*IEVPGA
Trigger: TGCACCCGGTACCTCAATTCAACTGCTACAAATAAA...TGCCCGGGCTGAAATATTTCTCGTAATAGCAGAATATTTCATGGCCGAACTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
3UTR-3UTR CCA 90 bp AATTTTGATTTACTGCTTCCATCATCACAACACAGTACACCAGCATGGCCCTTAAAGTGCAACTACTCTTaGAGAGGGAATAAGGGGAGT +
Preference number: 2 (lower is better)
Translates to: NFDLLLPSSQHSTPAWPLKCNYS*RGNKGS
Trigger: ACTCCCCTTATTCCCTCTCCAAGAGTAGTTGCACTT...TAAGGGCCATGCTGGTGTACTGTGTTGTGATGATGGAAGCAGTAAATCAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
3UTR-3UTR TCA 90 bp AAGAGTTCGGCCATGAAATATTCTGCTATTACGAGAAATATTTCAGCCCGGGCAATTGTTTTGGGAGTTTaGAGAGTCATGTTCAGACCA +
Preference number: 2 (lower is better)
Translates to: KSSAMKYSAITRNISARAIVLGV*RVMFRP
Trigger: TGGTCTGAACATGACTCTTCAAACTCCCAAAACAAT...TGCCCGGGCTGAAATATTTCTCGTAATAGCAGAATATTTCATGGCCGAACTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
3UTR-3UTR GCA 90 bp AATTTTGATTTACTGCTTCCATCATCACAACACAGTACACCAGCATGGCCCTTAGTACAAACCATCCTGTaGAGTTTACAACAAAAGGAA +
Preference number: 2 (lower is better)
Translates to: NFDLLLPSSQHSTPAWPLVQTIL*SLQQKE
Trigger: TTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTAC...TAAGGGCCATGCTGGTGTACTGTGTTGTGATGATGGAAGCAGTAAATCAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
3UTR-3UTR GCA 90 bp GAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTTTTTCTGTCTTCAAAATaGGATAAACCAGGACTCCAA +
Preference number: 2 (lower is better)
Translates to: ESCSDHKISRTIVRVTLFFLSSK*DKPGLQ
Trigger: TTGGAGTCCTGGTTTATCGCATTTTGAAGACAGAAA...AAATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000449193.7
3UTR-3UTR CAA 90 bp GAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTTGCTCACAGAAACTTCTaGCTACCTCACCTCACCTCA +
Preference number: 3 (lower is better)
Translates to: ESCSDHKISRTIVRVTLFAHRNF*LPHLTS
Trigger: TGAGGTGAGGTGAGGTAGCAAGAAGTTTCTGTGAGC...AAATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
3UTR-3UTR CAA 90 bp AAGAGTTCGGCCATGAAATATTCTGCTATTACGAGAAATATTTCAGCCCGGGCAAATTGTTTTGGGAGTTaGAAGAGTCATGTTCAGACC +
Preference number: 3 (lower is better)
Translates to: KSSAMKYSAITRNISARANCFGS*KSHVQT
Trigger: GGTCTGAACATGACTCTTCAAACTCCCAAAACAATT...TGCCCGGGCTGAAATATTTCTCGTAATAGCAGAATATTTCATGGCCGAACTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
3UTR-3UTR CAA 90 bp TGCAGTAGAAACTCTCCTGCTCTATACACAGGATGGTCTGAAAACACAAGTTTTAACACATTAATGGACTaGTACAAACCATCCTGTGCA +
Preference number: 3 (lower is better)
Translates to: CSRNSPALYTGWSENTSFNTLMD*YKPSCA
Trigger: TGCACAGGATGGTTTGTACAAGTCCATTAATGTGTT...AAAACTTGTGTTTTCAGACCATCCTGTGTATAGAGCAGGAGAGTTTCTACTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
3UTR TCA 72 bp GTATTTACTGATTTGTCACTATCAAGAGTTCGGCCATaGAATATTCTGCTATTACGAGAAATATTTCAGCCC +
Preference number: 3 (lower is better)
Translates to: VFTDLSLSRVRP*NILLLREIFQP
Trigger: GGGCTGAAATATTTCTCGTAATAGCAGAATATTTCATGGCCGAACTCTTGATAGTGACAAATCAGTAAATAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp AATAACATTTTGGGCTCACAGAAACTTCTTGCTACCTCACCTCACCTCACTGTGCCCGGGCGCTGGGACTaGGCGCTGATTGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: NNILGSQKLLATSPHLTVPGRWD*ALIGRG
Trigger: GCCCCTGCCAATCAGCGCGCAGTCCCAGCGCCCGGG...CACAGTGAGGTGAGGTGAGGTAGCAAGAAGTTTCTGTGAGCCCAAAATGTTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp GAGCTCCAGAAAATAACATTTTGGGCTCACAGAAACTTCTTGCTACCTCACCTCGGACTGCGCGCTGATTaGCAGGGGCCGCGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: ELQKITFWAHRNFLLPHLGLRAD*QGPRGS
Trigger: GGAGCCGCGCGGCCCCTGCCAATCAGCGCGCAGTCC...GAGGTGAGGTAGCAAGAAGTTTCTGTGAGCCCAAAATGTTATTTTCTGGAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp ATCCGATTTCTGTCTTCAAAATGCGATAAACCAGGACTCCAAAGGGGGTGTAACCGAGCAGGCAGTCCTTaGCGCCGCCGCGCTTGCGCT +
Preference number: 4 (lower is better)
Translates to: IRFLSSKCDKPGLQRGCNRAGSP*RRRACA
Trigger: AGCGCAAGCGCGGCGGCGCCAAGGACTGCCTGCTCG...GTTACACCCCCTTTGGAGTCCTGGTTTATCGCATTTTGAAGACAGAAATCGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTGCTGGGACTGCGCGCTaGTTGGCAGGGGCCGCGCGG +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVAGTAR*LAGAAR
Trigger: CCGCGCGGCCCCTGCCAATCAGCGCGCAGTCCCAGC...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR TCA 90 bp AGAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTGCTGGGACTGCGCGCTaGTTGGCAGGGGCCGCGCGG +
Preference number: 4 (lower is better)
Translates to: RVMFRPQDKQDNSKSHLIAGTAR*LAGAAR
Trigger: CCGCGCGGCCCCTGCCAATCAGCGCGCAGTCCCAGC...AATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp ATCCGATTTCTGTCTTCAAAATGCGATAAACCAGGACTCCAAAGGGGGTGTAACAGCAGCGGGTTTGGTTaGAGCGGCGGCGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: IRFLSSKCDKPGLQRGCNSSGFG*SGGGGQ
Trigger: CTGGCCTCCGCCGCCGCTGCAACCAAACCCGCTGCT...GTTACACCCCCTTTGGAGTCCTGGTTTATCGCATTTTGAAGACAGAAATCGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp AGGCAGCTTTTACTAGCATTTAATCAGGACTCACACCCCAATCTTTCCACTAAACTCTGCTGCGGCGGCTaGGCCCGGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RQLLLAFNQDSHPNLSTKLCCGG*ARWWWW
Trigger: CCACCACCACCACCGGGCCCAGCCGCCGCAGCAGAG...TTTAGTGGAAAGATTGGGGTGTGAGTCCTGATTAAATGCTAGTAAAAGCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp GAGCTCCAGAAAATAACATTTTGGGCTCACAGAAACTTCTTGCTACCTCACCTCGGCTGGAGCCGGAGCTaGAGTCCGACTCGGTGGACG +
Preference number: 4 (lower is better)
Translates to: ELQKITFWAHRNFLLPHLGWSRS*SPTRWT
Trigger: CGTCCACCGAGTCGGACTCCAGCTCCGGCTCCAGCC...GAGGTGAGGTAGCAAGAAGTTTCTGTGAGCCCAAAATGTTATTTTCTGGAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp AATAACATTTTGGGCTCACAGAAACTTCTTGCTACCTCACCTCACCTCACTGTGCCGCCGCCGCCGCCTTaGCTTTGTAGGACCTGGGCA +
Preference number: 4 (lower is better)
Translates to: NNILGSQKLLATSPHLTVPPPPP*LCRTWA
Trigger: TGCCCAGGTCCTACAAAGCCAAGGCGGCGGCGGCGG...CACAGTGAGGTGAGGTGAGGTAGCAAGAAGTTTCTGTGAGCCCAAAATGTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCCCCGGGCGCTGGGACTaGGCGCTGATTGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFPGRWD*ALIGRG
Trigger: GCCCCTGCCAATCAGCGCGCAGTCCCAGCGCCCGGG...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR GCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCGGCGGCGGCGGCGGCTaGCGGGTGTTTGCTGCACAG +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFGGGGG*RVFAAQ
Trigger: CTGTGCAGCAAACACCCGGCAGCCGCCGCCGCCGCC...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCGGACTGCGCGCTGATTaGCAGGGGCCGCGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFGLRAD*QGPRGS
Trigger: GGAGCCGCGCGGCCCCTGCCAATCAGCGCGCAGTCC...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCTCTGCTGCGGCGGCTaGGCCCGGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVLCCGG*ARWWWW
Trigger: CCACCACCACCACCGGGCCCAGCCGCCGCAGCAGAG...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CCA 90 bp GTCACTTGCAGTAGAAACTCTCCTGCTCTATACACAGGATGGTCTGAAAACACACCTGCGCCTGCACGCTaGGAGGCTTGCAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: VTCSRNSPALYTGWSENTPAPAR*EACRSW
Trigger: CCAGCTTCTGCAAGCCTCCCAGCGTGCAGGCGCAGG...TGTGTTTTCAGACCATCCTGTGTATAGAGCAGGAGAGTTTCTACTGCAAGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp GTCACTTGCAGTAGAAACTCTCCTGCTCTATACACAGGATGGTCTGAAAACACACGTCTTCCCGGGAGATaGGCGTGCATTTGGCGGCGT +
Preference number: 4 (lower is better)
Translates to: VTCSRNSPALYTGWSENTRLPGR*ACIWRR
Trigger: ACGCCGCCAAATGCACGCTCATCTCCCGGGAAGACG...TGTGTTTTCAGACCATCCTGTGTATAGAGCAGGAGAGTTTCTACTGCAAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp ATCCGATTTCTGTCTTCAAAATGCGATAAACCAGGACTCCAAAGGGGGTGTAACGTTAAACCCGCCCCGTaGACCACCCCAGTGCGGACT +
Preference number: 4 (lower is better)
Translates to: IRFLSSKCDKPGLQRGCNVKPAP*TTPVRT
Trigger: AGTCCGCACTGGGGTGGTTCACGGGGCGGGTTTAAC...GTTACACCCCCTTTGGAGTCCTGGTTTATCGCATTTTGAAGACAGAAATCGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp GAGCTCCAGAAAATAACATTTTGGGCTCACAGAAACTTCTTGCTACCTCACCTCGACAGGCGGATCACCTaGGGTCAGGAGTTCGGGACC +
Preference number: 4 (lower is better)
Translates to: ELQKITFWAHRNFLLPHLDRRIT*GQEFGT
Trigger: GGTCCCGAACTCCTGACCTCAGGTGATCCGCCTGTC...GAGGTGAGGTAGCAAGAAGTTTCTGTGAGCCCAAAATGTTATTTTCTGGAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp ATCCGATTTCTGTCTTCAAAATGCGATAAACCAGGACTCCAAAGGGGGTGTAACAAGTTGGCCTGCGCCTaGACGCTGGGAGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: IRFLSSKCDKPGLQRGCNKLACA*TLGGLQ
Trigger: CTGCAAGCCTCCCAGCGTGCAGGCGCAGGCCAACTT...GTTACACCCCCTTTGGAGTCCTGGTTTATCGCATTTTGAAGACAGAAATCGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp TGCAGTAGAAACTCTCCTGCTCTATACACAGGATGGTCTGAAAACACAAGTTTTTGGCGCCGCCGCGCTTaGGCTTGCAGCGGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: CSRNSPALYTGWSENTSFWRRRA*ACSGSS
Trigger: TGAGCTACCGCTGCAAGCGCAAGCGCGGCGGCGCCA...AAAACTTGTGTTTTCAGACCATCCTGTGTATAGAGCAGGAGAGTTTCTACTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp AATAACATTTTGGGCTCACAGAAACTTCTTGCTACCTCACCTCACCTCACTGTGTCGGATGCTCTGCACTaGCACTTGGCTGGAGCCGGA +
Preference number: 4 (lower is better)
Translates to: NNILGSQKLLATSPHLTVSDALH*HLAGAG
Trigger: TCCGGCTCCAGCCAAGTGTCAGTGCAGAGCATCCGA...CACAGTGAGGTGAGGTGAGGTAGCAAGAAGTTTCTGTGAGCCCAAAATGTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp AGGCAGCTTTTACTAGCATTTAATCAGGACTCACACCCCAATCTTTCCACTAAAAATCCGAGGCCCCGCTaGCCCCCTCCTCCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: RQLLLAFNQDSHPNLSTKNPRPR*PPPPPL
Trigger: AAGAGGAGGAGGAGGGGGGCAGCGGGGCCTCGGATT...TTTAGTGGAAAGATTGGGGTGTGAGTCCTGATTAAATGCTAGTAAAAGCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GAGCTCCAGAAAATAACATTTTGGGCTCACAGAAACTTCTTGCTACCTCACCTCTACAAGAAGTTGGCCTaGGCCTGCACGCTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: ELQKITFWAHRNFLLPHLYKKLA*ACTLGG
Trigger: GCCTCCCAGCGTGCAGGCGCAGGCCAACTTCTTGTA...GAGGTGAGGTAGCAAGAAGTTTCTGTGAGCCCAAAATGTTATTTTCTGGAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTAGCAGCGGGTTTGGTTaGAGCGGCGGCGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVSSGFG*SGGGGQ
Trigger: CTGGCCTCCGCCGCCGCTGCAACCAAACCCGCTGCT...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR GCA 90 bp GAGCTCCAGAAAATAACATTTTGGGCTCACAGAAACTTCTTGCTACCTCACCTCGCAGTACACCGGAGATaGTTTGGGGGCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: ELQKITFWAHRNFLLPHLAVHRR*FGGPAL
Trigger: CAGAGCTGGGCCCCCAAAGCATCTCCGGTGTACTGC...GAGGTGAGGTAGCAAGAAGTTTCTGTGAGCCCAAAATGTTATTTTCTGGAGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GAGCTCCAGAAAATAACATTTTGGGCTCACAGAAACTTCTTGCTACCTCACCTCGGTCTGAGTCCCCGATaGAGATCAGTACCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: ELQKITFWAHRNFLLPHLGLSPR*RSVPGP
Trigger: GGGCCCAGGTACTGATCTGCATCGGGGACTCAGACC...GAGGTGAGGTAGCAAGAAGTTTCTGTGAGCCCAAAATGTTATTTTCTGGAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCTGGTGGTGGTGGTGGTaGTGGTGCGGAGGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFWWWWW*WCGGGQ
Trigger: CTGCCCGCCTCCGCACCACCACCACCACCACCACCA...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTGGAAAGCTGCCCAGATaGGGCTGCGGCCGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVGKLPR*GCGRWW
Trigger: CCACCACCGGCCGCAGCCCCATCTGGGCAGCTTTCC...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCGGCTGGAGCCGGAGCTaGAGTCCGACTCGGTGGACG +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFGWSRS*SPTRWT
Trigger: CGTCCACCGAGTCGGACTCCAGCTCCGGCTCCAGCC...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CCA 90 bp TGCAGTAGAAACTCTCCTGCTCTATACACAGGATGGTCTGAAAACACAAGTTTTCGAAAGCAGCGGGTTTaGTTGCAGCGGCGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: CSRNSPALYTGWSENTSFRKQRV*LQRRRR
Trigger: CCTCCGCCGCCGCTGCAACCAAACCCGCTGCTTTCG...AAAACTTGTGTTTTCAGACCATCCTGTGTATAGAGCAGGAGAGTTTCTACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCCGCCGCCGGGTGTTTaGTGCACAGCAGGCTCCGAA +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVPPPGV*CTAGSE
Trigger: TTCGGAGCCTGCTGTGCAGCAAACACCCGGCGGCGG...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444772.3
CDS-3UTR GCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTAGCTCTCGGGAAAGCTaGCCAGATGGGGCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVSSRES*PDGAAA
Trigger: GGCCGCAGCCCCATCTGGGCAGCTTTCCCGAGAGCT...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR GCA 90 bp GAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTTAGCTCTCGGGAAAGCTaGCCAGATGGGGCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: ESCSDHKISRTIVRVTLFSSRES*PDGAAA
Trigger: GGCCGCAGCCCCATCTGGGCAGCTTTCCCGAGAGCT...AAATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp AAGAGTTCGGCCATGAAATATTCTGCTATTACGAGAAATATTTCAGCCCGGGCATGGACTCGGAGTCGCTaGTGCAGCTCTCGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: KSSAMKYSAITRNISARAWTRSR*CSSRES
Trigger: GCTTTCCCGAGAGCTGCAGCAGCGACTCCGAGTCCA...TGCCCGGGCTGAAATATTTCTCGTAATAGCAGAATATTTCATGGCCGAACTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTAATCCGAGGCCCCGCTaGCCCCCTCCTCCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVNPRPR*PPPPPL
Trigger: AAGAGGAGGAGGAGGGGGGCAGCGGGGCCTCGGATT...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR GCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCTTGGGGGCCCAGCTCTaGAGATTCCACTCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFLGAQL*RFHSAG
Trigger: GCCGGCGGAGTGGAATCTGCAGAGCTGGGCCCCCAA...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR GCA 90 bp AGAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTTTGGGGGCCCAGCTCTaGAGATTCCACTCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: RVMFRPQDKQDNSKSHLILGAQL*RFHSAG
Trigger: GCCGGCGGAGTGGAATCTGCAGAGCTGGGCCCCCAA...AATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GAAACAGTAAAGTGTTCCAGCTCTACCGTAATAACTGAGTTTTACTTGAGTCTTCGCCGCGCTTGCGCTTaGAGCGGTAGCTCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: ETVKCSSSTVITEFYLSLRRACA*SGSSGS
Trigger: GGAGCCTGAGCTACCGCTGCAAGCGCAAGCGCGGCG...AAGACTCAAGTAAAACTCAGTTATTACGGTAGAGCTGGAACACTTTACTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp AATTTTGATTTACTGCTTCCATCATCACAACACAGTACACCAGCATGGCCCTTAGCACTGACACTTGGCTaGAGCCGGAGCTGGAGTCCG +
Preference number: 4 (lower is better)
Translates to: NFDLLLPSSQHSTPAWPLALTLG*SRSWSP
Trigger: CGGACTCCAGCTCCGGCTCCAGCCAAGTGTCAGTGC...TAAGGGCCATGCTGGTGTACTGTGTTGTGATGATGGAAGCAGTAAATCAAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCCTGCGCCTGCACGCTaGGAGGCTTGCAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVPAPAR*EACRSW
Trigger: CCAGCTTCTGCAAGCCTCCCAGCGTGCAGGCGCAGG...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCCGAAAGCAGCGGGTTTaGTTGCAGCGGCGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFRKQRV*LQRRRR
Trigger: CCTCCGCCGCCGCTGCAACCAAACCCGCTGCTTTCG...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CCA 90 bp GTCACTTGCAGTAGAAACTCTCCTGCTCTATACACAGGATGGTCTGAAAACACAACACCGGAGATGCTTTaGGGGCCCAGCTCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: VTCSRNSPALYTGWSENTTPEML*GPSSAD
Trigger: ATCTGCAGAGCTGGGCCCCCAAAGCATCTCCGGTGT...TGTGTTTTCAGACCATCCTGTGTATAGAGCAGGAGAGTTTCTACTGCAAGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCCGTCTTCCCGGGAGATaGGCGTGCATTTGGCGGCGT +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFRLPGR*ACIWRR
Trigger: ACGCCGCCAAATGCACGCTCATCTCCCGGGAAGACG...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR TCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTGCCTGCGCTTGGTCTTaGGGACGCGCTCGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVACAWS*GRARFC
Trigger: GCAAAACCGAGCGCGTCCTCAAGACCAAGCGCAGGC...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR TCA 90 bp TGCAGTAGAAACTCTCCTGCTCTATACACAGGATGGTCTGAAAACACAAGTTTTCCTCCTCCTCCGAGCTaGCTTCACTGGAATCCGAGG +
Preference number: 4 (lower is better)
Translates to: CSRNSPALYTGWSENTSFPPPPS*LHWNPR
Trigger: CCTCGGATTCCAGTGAAGTCAGCTCGGAGGAGGAGG...AAAACTTGTGTTTTCAGACCATCCTGTGTATAGAGCAGGAGAGTTTCTACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp ATCCGATTTCTGTCTTCAAAATGCGATAAACCAGGACTCCAAAGGGGGTGTAACGTTGACCATGTCAGCTaGCTCTATGGGCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: IRFLSSKCDKPGLQRGCNVDHVS*LYGLLS
Trigger: GCTGAGCAGCCCATAGAGTCAGCTGACATGGTCAAC...GTTACACCCCCTTTGGAGTCCTGGTTTATCGCATTTTGAAGACAGAAATCGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp TGCAGTAGAAACTCTCCTGCTCTATACACAGGATGGTCTGAAAACACAAGTTTTACTCGGAGTCGCTGCTaGAGCTCTCGGGAAAGCTGC +
Preference number: 4 (lower is better)
Translates to: CSRNSPALYTGWSENTSFTRSRC*SSRESC
Trigger: GCAGCTTTCCCGAGAGCTGCAGCAGCGACTCCGAGT...AAAACTTGTGTTTTCAGACCATCCTGTGTATAGAGCAGGAGAGTTTCTACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCAAGTTGGCCTGCGCCTaGACGCTGGGAGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFKLACA*TLGGLQ
Trigger: CTGCAAGCCTCCCAGCGTGCAGGCGCAGGCCAACTT...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR GCA 90 bp ATCCGATTTCTGTCTTCAAAATGCGATAAACCAGGACTCCAAAGGGGGTGTAACAGGTGGAAGAGGTATTaGAGAACCGCCCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: IRFLSSKCDKPGLQRGCNRWKRY*RTAQLP
Trigger: TGGCAGCTGGGCGGTTCTGCAATACCTCTTCCACCT...GTTACACCCCCTTTGGAGTCCTGGTTTATCGCATTTTGAAGACAGAAATCGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp AGAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTCGGCTGCCGGGTGTTTaGTGCACAGCAGGCTCCGAA +
Preference number: 4 (lower is better)
Translates to: RVMFRPQDKQDNSKSHLIRLPGV*CTAGSE
Trigger: TTCGGAGCCTGCTGTGCAGCAAACACCCGGCAGCCG...AATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCGGTCCGAGTAGGAGCTaGACTCGGAGTCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFGPSRS*TRSRCC
Trigger: GCAGCAGCGACTCCGAGTCCAGCTCCTACTCGGACC...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTGGTCCGAGTAGGAGCTaGACTCGGAGTCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVGPSRS*TRSRCC
Trigger: GCAGCAGCGACTCCGAGTCCAGCTCCTACTCGGACC...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCTGGAGTCCGACTCGGTaGACGAGTCCTCCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFWSPTR*TSPPPP
Trigger: CGGAGGAGGAGGACTCGTCCACCGAGTCGGACTCCA...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTTGGAGTCCGACTCGGTaGACGAGTCCTCCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVWSPTR*TSPPPP
Trigger: CGGAGGAGGAGGACTCGTCCACCGAGTCGGACTCCA...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCGCACTGACACTTGGCTaGAGCCGGAGCTGGAGTCCG +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFALTLG*SRSWSP
Trigger: CGGACTCCAGCTCCGGCTCCAGCCAAGTGTCAGTGC...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CCA 90 bp TGCAGTAGAAACTCTCCTGCTCTATACACAGGATGGTCTGAAAACACAAGTTTTCTCTGCACTGACACTTaGCTGGAGCCGGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: CSRNSPALYTGWSENTSFLCTDT*LEPELE
Trigger: CTCCAGCTCCGGCTCCAGCCAAGTGTCAGTGCAGAG...AAAACTTGTGTTTTCAGACCATCCTGTGTATAGAGCAGGAGAGTTTCTACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCAACAACTCCCCAGGCTaGCCGGGCAGTACACCGGAG +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFNNSPG*PGSTPE
Trigger: CTCCGGTGTACTGCCCGGCCAGCCTGGGGAGTTGTT...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CCA 90 bp GAGCTCCAGAAAATAACATTTTGGGCTCACAGAAACTTCTTGCTACCTCACCTCCCCAAGGCGGCTCCTTaGCTGCTTTGCAAAATTCGG +
Preference number: 4 (lower is better)
Translates to: ELQKITFWAHRNFLLPHLPKAAP*LLCKIR
Trigger: CCGAATTTTGCAAAGCAGCCAAGGAGCCGCCTTGGG...GAGGTGAGGTAGCAAGAAGTTTCTGTGAGCCCAAAATGTTATTTTCTGGAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp AATAACATTTTGGGCTCACAGAAACTTCTTGCTACCTCACCTCACCTCACTGTGGATCTGCCAGTGTGTTaGTCTGAGTCCCCGATGCAG +
Preference number: 4 (lower is better)
Translates to: NNILGSQKLLATSPHLTVDLPVC*SESPMQ
Trigger: CTGCATCGGGGACTCAGACCAACACACTGGCAGATC...CACAGTGAGGTGAGGTGAGGTAGCAAGAAGTTTCTGTGAGCCCAAAATGTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp ATCCGATTTCTGTCTTCAAAATGCGATAAACCAGGACTCCAAAGGGGGTGTAACAAGCCGTTGACCAGATaGAACCTCTCCAGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: IRFLSSKCDKPGLQRGCNKPLTR*NLSRQV
Trigger: CACTTGCCTGGAGAGGTTTCATCTGGTCAACGGCTT...GTTACACCCCCTTTGGAGTCCTGGTTTATCGCATTTTGAAGACAGAAATCGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp AATAACATTTTGGGCTCACAGAAACTTCTTGCTACCTCACCTCACCTCACTGTGCTCCTCCTCTTCCTCTaGGGACACAGAATTGCTGGA +
Preference number: 4 (lower is better)
Translates to: NNILGSQKLLATSPHLTVLLLFL*GHRIAG
Trigger: TCCAGCAATTCTGTGTCCTCAGAGGAAGAGGAGGAG...CACAGTGAGGTGAGGTGAGGTAGCAAGAAGTTTCTGTGAGCCCAAAATGTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCCCTCCTCCTCCGAGCTaGCTTCACTGGAATCCGAGG +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFPPPPS*LHWNPR
Trigger: CCTCGGATTCCAGTGAAGTCAGCTCGGAGGAGGAGG...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR TCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCTCGGATGCTCTGCACTaGCACTTGGCTGGAGCCGGA +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFSDALH*HLAGAG
Trigger: TCCGGCTCCAGCCAAGTGTCAGTGCAGAGCATCCGA...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR TCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCTGTCTTTGGGCTAGGTaGAGAGGCCCCCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFCLWAR*RGPLCQ
Trigger: CTGGCAGAGGGGGCCTCTTCACCTAGCCCAAAGACA...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR TCA 90 bp GTCACTTGCAGTAGAAACTCTCCTGCTCTATACACAGGATGGTCTGAAAACACAAATGACAGAGTGAAGTaGGCTCGTCCGGAGACACCT +
Preference number: 4 (lower is better)
Translates to: VTCSRNSPALYTGWSENTNDRVK*ARPETP
Trigger: AGGTGTCTCCGGACGAGCTCACTTCACTCTGTCATT...TGTGTTTTCAGACCATCCTGTGTATAGAGCAGGAGAGTTTCTACTGCAAGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTACTCGGAGTCGCTGCTaGAGCTCTCGGGAAAGCTGC +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVTRSRC*SSRESC
Trigger: GCAGCTTTCCCGAGAGCTGCAGCAGCGACTCCGAGT...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR GCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTTGGACTCGGAGTCGCTaGTGCAGCTCTCGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVWTRSR*CSSRES
Trigger: GCTTTCCCGAGAGCTGCAGCAGCGACTCCGAGTCCA...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR GCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCTACAAGAAGTTGGCCTaGGCCTGCACGCTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFYKKLA*ACTLGG
Trigger: GCCTCCCAGCGTGCAGGCGCAGGCCAACTTCTTGTA...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR GCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCGCAGTACACCGGAGATaGTTTGGGGGCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFAVHRR*FGGPAL
Trigger: CAGAGCTGGGCCCCCAAAGCATCTCCGGTGTACTGC...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CCA 90 bp AATTTTGATTTACTGCTTCCATCATCACAACACAGTACACCAGCATGGCCCTTACAAAATCCGAGTCGTTaGCCGCGTGGTCCGAGTAGG +
Preference number: 4 (lower is better)
Translates to: NFDLLLPSSQHSTPAWPLQNPSR*PRGPSR
Trigger: CCTACTCGGACCACGCGGCCAACGACTCGGATTTTG...TAAGGGCCATGCTGGTGTACTGTGTTGTGATGATGGAAGCAGTAAATCAAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCCTCTGCACTGACACTTaGCTGGAGCCGGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFLCTDT*LEPELE
Trigger: CTCCAGCTCCGGCTCCAGCCAAGTGTCAGTGCAGAG...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTGCGGCGGAGGCCAGATaGTACAAGAAGTTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVAAEAR*YKKLAC
Trigger: GCAGGCCAACTTCTTGTACCATCTGGCCTCCGCCGC...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CCA 90 bp TGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTTAAAACCAACAACTCCCCAGGCTaGCCGGGCAGTACACCGGAG +
Preference number: 4 (lower is better)
Translates to: CSDHKISRTIVRVTLFKTNNSPG*PGSTPE
Trigger: CTCCGGTGTACTGCCCGGCCAGCCTGGGGAGTTGTT...GGTTTTAAATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp AATAACATTTTGGGCTCACAGAAACTTCTTGCTACCTCACCTCACCTCACTGTGCTGGTTCTGTTCCCCTaGCTTCAGCCCAAATCCTTC +
Preference number: 4 (lower is better)
Translates to: NNILGSQKLLATSPHLTVLVLFP*LQPKSF
Trigger: GAAGGATTTGGGCTGAAGCCAGGGGAACAGAACCAG...CACAGTGAGGTGAGGTGAGGTAGCAAGAAGTTTCTGTGAGCCCAAAATGTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp AAGAGTTCGGCCATGAAATATTCTGCTATTACGAGAAATATTTCAGCCCGGGCACACAGTACACCAGCATaGCCCTTACCCAGGGCTAGA +
Preference number: 4 (lower is better)
Translates to: KSSAMKYSAITRNISARAHSTPA*PLPRAR
Trigger: TCTAGCCCTGGGTAAGGGCCATGCTGGTGTACTGTG...TGCCCGGGCTGAAATATTTCTCGTAATAGCAGAATATTTCATGGCCGAACTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTGCGGGCAGAAGCCGTTaGCCAGATGAAACCTCTCCA +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVAGRSR*PDETSP
Trigger: TGGAGAGGTTTCATCTGGTCAACGGCTTCTGCCCGC...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR TCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCAGAAGCTGGTGCGCCTaGATCGGATGCTCTGCACTG +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFRSWCA*IGCSAL
Trigger: CAGTGCAGAGCATCCGATTCAGGCGCACCAGCTTCT...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR TCA 90 bp GAAACAGTAAAGTGTTCCAGCTCTACCGTAATAACTGAGTTTTACTTGAGTCTTTGTCTTTGGGCTAGGTaGAGAGGCCCCCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: ETVKCSSSTVITEFYLSLCLWAR*RGPLCQ
Trigger: CTGGCAGAGGGGGCCTCTTCACCTAGCCCAAAGACA...AAGACTCAAGTAAAACTCAGTTATTACGGTAGAGCTGGAACACTTTACTGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp GAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTTGCCATACTGAAATCCTaGGCCACCACGAGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: ESCSDHKISRTIVRVTLFAILKS*ATTRGE
Trigger: CTCTCCCCTCGTGGTGGCTCAGGATTTCAGTATGGC...AAATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp GTCACTTGCAGTAGAAACTCTCCTGCTCTATACACAGGATGGTCTGAAAACACAGCCTGGTCAACATGGTaGAACCCCGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: VTCSRNSPALYTGWSENTAWSTW*NPVSTK
Trigger: TTTAGTAGAGACGGGGTTTCACCATGTTGACCAGGC...TGTGTTTTCAGACCATCCTGTGTATAGAGCAGGAGAGTTTCTACTGCAAGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTGGACGCGCTCGGTTTTaGAGGAGGTGTAGAGCGCTT +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVGRARF*RRCRAL
Trigger: AAGCGCTCTACACCTCCTGCAAAACCGAGCGCGTCC...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR GCA 90 bp AAGAGTTCGGCCATGAAATATTCTGCTATTACGAGAAATATTTCAGCCCGGGCACCCCGCCAAAGTTGGTaGTTGTCCTTCCAAAATCCC +
Preference number: 4 (lower is better)
Translates to: KSSAMKYSAITRNISARAPRQSW*LSFQNP
Trigger: GGGATTTTGGAAGGACAAGCACCAACTTTGGCGGGG...TGCCCGGGCTGAAATATTTCTCGTAATAGCAGAATATTTCATGGCCGAACTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCCCGCCGGGTGTTTGCTaGACAGCAGGCTCCGAAAAT +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFPPGVC*TAGSEN
Trigger: ATTTTCGGAGCCTGCTGTGCAGCAAACACCCGGCGG...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444772.3
CDS-3UTR GCA 90 bp AAGAGTTCGGCCATGAAATATTCTGCTATTACGAGAAATATTTCAGCCCGGGCAGGCTTTAGTTGCTGCTaGTCCTGCAGCGTTCACTTC +
Preference number: 4 (lower is better)
Translates to: KSSAMKYSAITRNISARAGFSCC*SCSVHF
Trigger: GAAGTGAACGCTGCAGGAGCAGCAGCAACTAAAGCC...TGCCCGGGCTGAAATATTTCTCGTAATAGCAGAATATTTCATGGCCGAACTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GAGCTCCAGAAAATAACATTTTGGGCTCACAGAAACTTCTTGCTACCTCACCTCATTCTCGGCTTTAGTTaGTGCTGCTCCTGCAGCGTT +
Preference number: 4 (lower is better)
Translates to: ELQKITFWAHRNFLLPHLILGFS*CCSCSV
Trigger: AACGCTGCAGGAGCAGCAGCAACTAAAGCCGAGAAT...GAGGTGAGGTAGCAAGAAGTTTCTGTGAGCCCAAAATGTTATTTTCTGGAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp AATAACATTTTGGGCTCACAGAAACTTCTTGCTACCTCACCTCACCTCACTGTGCGTGAACCACCCCAGTaGGGACTTACGTTTGGAATT +
Preference number: 4 (lower is better)
Translates to: NNILGSQKLLATSPHLTVREPPQ*GLTFGI
Trigger: AATTCCAAACGTAAGTCCGCACTGGGGTGGTTCACG...CACAGTGAGGTGAGGTGAGGTAGCAAGAAGTTTCTGTGAGCCCAAAATGTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GTCACTTGCAGTAGAAACTCTCCTGCTCTATACACAGGATGGTCTGAAAACACATCCCGGCGAAGGAAGTaGCAAACTCTAGGCGAAATT +
Preference number: 4 (lower is better)
Translates to: VTCSRNSPALYTGWSENTSRRRK*QTLGEI
Trigger: AATTTCGCCTAGAGTTTGGCACTTCCTTCGCCGGGA...TGTGTTTTCAGACCATCCTGTGTATAGAGCAGGAGAGTTTCTACTGCAAGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCAAAATCCGAGTCGTTaGCCGCGTGGTCCGAGTAGG +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVQNPSR*PRGPSR
Trigger: CCTACTCGGACCACGCGGCCAACGACTCGGATTTTG...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTGATGGTACAAGAAGTTaGCCTGCGCCTGCACGCTGG +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVDGTRS*PAPARW
Trigger: CCAGCGTGCAGGCGCAGGCCAACTTCTTGTACCATC...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CCA 90 bp TGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTTAAAACCGCGGCGGAGGCCAGATaGTACAAGAAGTTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: CSDHKISRTIVRVTLFKTAAEAR*YKKLAC
Trigger: GCAGGCCAACTTCTTGTACCATCTGGCCTCCGCCGC...GGTTTTAAATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCACACCGGAGATGCTTTaGGGGCCCAGCTCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFTPEML*GPSSAD
Trigger: ATCTGCAGAGCTGGGCCCCCAAAGCATCTCCGGTGT...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CCA 90 bp AATAACATTTTGGGCTCACAGAAACTTCTTGCTACCTCACCTCACCTCACTGTGATGCAGATCAGTACCTaGGCCCCTCTATTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: NNILGSQKLLATSPHLTVMQIST*APLFLP
Trigger: AGGAAGGAATAGAGGGGCCCAGGTACTGATCTGCAT...CACAGTGAGGTGAGGTGAGGTAGCAAGAAGTTTCTGTGAGCCCAAAATGTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp GAAACAGTAAAGTGTTCCAGCTCTACCGTAATAACTGAGTTTTACTTGAGTCTTTGGCTTTGTAGGACCTaGGCAACAGCAGCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: ETVKCSSSTVITEFYLSLWLCRT*ATAAGA
Trigger: GGCGCCTGCTGCTGTTGCCCAGGTCCTACAAAGCCA...AAGACTCAAGTAAAACTCAGTTATTACGGTAGAGCTGGAACACTTTACTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp AAGAGTTCGGCCATGAAATATTCTGCTATTACGAGAAATATTTCAGCCCGGGCATATTTGCTAAAAATCTaGGGTAGATGGGCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: KSSAMKYSAITRNISARAYLLKI*GRWAAG
Trigger: CCCCGCCGCCCATCTACCTCAGATTTTTAGCAAATA...TGCCCGGGCTGAAATATTTCTCGTAATAGCAGAATATTTCATGGCCGAACTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp TGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTTAAAACCGCGGGCAGAAGCCGTTaGCCAGATGAAACCTCTCCA +
Preference number: 4 (lower is better)
Translates to: CSDHKISRTIVRVTLFKTAGRSR*PDETSP
Trigger: TGGAGAGGTTTCATCTGGTCAACGGCTTCTGCCCGC...GGTTTTAAATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp GAAACAGTAAAGTGTTCCAGCTCTACCGTAATAACTGAGTTTTACTTGAGTCTTAGAAGCTGGTGCGCCTaGATCGGATGCTCTGCACTG +
Preference number: 4 (lower is better)
Translates to: ETVKCSSSTVITEFYLSLRSWCA*IGCSAL
Trigger: CAGTGCAGAGCATCCGATTCAGGCGCACCAGCTTCT...AAGACTCAAGTAAAACTCAGTTATTACGGTAGAGCTGGAACACTTTACTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCTTGACTGGAGGTGTCTaGAGGACAGGTCGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFLTGGV*RTGRFP
Trigger: GGGAAAGCGACCTGTCCTTCAGACACCTCCAGTCAA...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR TCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTTTGACTGGAGGTGTCTaGAGGACAGGTCGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVLTGGV*RTGRFP
Trigger: GGGAAAGCGACCTGTCCTTCAGACACCTCCAGTCAA...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR TCA 90 bp AAGAGTTCGGCCATGAAATATTCTGCTATTACGAGAAATATTTCAGCCCGGGCATGGCCTTTTCACTGCTaGTGCTACATTGCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: KSSAMKYSAITRNISARAWPFHC*CYIAGY
Trigger: GTAGCCAGCAATGTAGCATCAGCAGTGAAAAGGCCA...TGCCCGGGCTGAAATATTTCTCGTAATAGCAGAATATTTCATGGCCGAACTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp GAAACAGTAAAGTGTTCCAGCTCTACCGTAATAACTGAGTTTTACTTGAGTCTTGCCAGTGTGTTGGTCTaGGTCCCCGATGCAGATCAG +
Preference number: 4 (lower is better)
Translates to: ETVKCSSSTVITEFYLSLASVLV*VPDADQ
Trigger: CTGATCTGCATCGGGGACTCAGACCAACACACTGGC...AAGACTCAAGTAAAACTCAGTTATTACGGTAGAGCTGGAACACTTTACTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp GAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTTGGCAGCAGAATCGTTTaGACCCAGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: ESCSDHKISRTIVRVTLFGSRIV*TQEVEV
Trigger: AACCTCCACCTCCTGGGTTCAAACGATTCTGCTGCC...AAATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCAGTTTAGAGGGGGTTTaGACGGCGAGCGCACGATCT +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFSLEGV*TASARS
Trigger: AGATCGTGCGCTCGCCGTGCAAACCCCCTCTAAACT...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR GCA 90 bp ATCCGATTTCTGTCTTCAAAATGCGATAAACCAGGACTCCAAAGGGGGTGTAACACTTCAGGATCAGTCTaGGAAGAGGGCAAATCCGTA +
Preference number: 4 (lower is better)
Translates to: IRFLSSKCDKPGLQRGCNTSGSV*EEGKSV
Trigger: TACGGATTTGCCCTCTTCGCAGACTGATCCTGAAGT...GTTACACCCCCTTTGGAGTCCTGGTTTATCGCATTTTGAAGACAGAAATCGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCTCGGCTTTAGTTGCTaGTGCTCCTGCAGCGTTCAC +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVLGFSC*CSCSVH
Trigger: GTGAACGCTGCAGGAGCAGCAGCAACTAAAGCCGAG...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR GCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCAGGTGGAAGAGGTATTaGAGAACCGCCCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFRWKRY*RTAQLP
Trigger: TGGCAGCTGGGCGGTTCTGCAATACCTCTTCCACCT...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR GCA 90 bp ATCCGATTTCTGTCTTCAAAATGCGATAAACCAGGACTCCAAAGGGGGTGTAACATCACTGTCTTTCACTaGTGCAGCTACTGGGAACCT +
Preference number: 4 (lower is better)
Translates to: IRFLSSKCDKPGLQRGCNITVFH*CSYWEP
Trigger: AGGTTCCCAGTAGCTGCAGCAGTGAAAGACAGTGAT...GTTACACCCCCTTTGGAGTCCTGGTTTATCGCATTTTGAAGACAGAAATCGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTTCCTCAGCCAGATGCTaGGTGTGTCTCAAGGCATCC +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVSSARC*VCLKAS
Trigger: GGATGCCTTGAGACACACGCAGCATCTGGCTGAGGA...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp AGAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTCTGCCGGGTGTTTGCTaGACAGCAGGCTCCGAAAAT +
Preference number: 4 (lower is better)
Translates to: RVMFRPQDKQDNSKSHLILPGVC*TAGSEN
Trigger: ATTTTCGGAGCCTGCTGTGCAGCAAACACCCGGCAG...AATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp AGAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTCACTGCTGCAGCTACTaGGAACCTGCCCTGTTACAG +
Preference number: 4 (lower is better)
Translates to: RVMFRPQDKQDNSKSHLIHCCSY*EPALLQ
Trigger: CTGTAACAGGGCAGGTTCCCAGTAGCTGCAGCAGTG...AATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp AAGAGTTCGGCCATGAAATATTCTGCTATTACGAGAAATATTTCAGCCCGGGCATTAACCGTACTGGATTaGAGGCGGGATCGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: KSSAMKYSAITRNISARALTVLD*RRDRPR
Trigger: TCTTGGACGATCCCGCCTCCAATCCAGTACGGTTAA...TGCCCGGGCTGAAATATTTCTCGTAATAGCAGAATATTTCATGGCCGAACTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCAAGCCGTTGACCAGATaGAACCTCTCCAGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFKPLTR*NLSRQV
Trigger: CACTTGCCTGGAGAGGTTTCATCTGGTCAACGGCTT...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR TCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCCTCCTCCTCTTCCTCTaGGGACACAGAATTGCTGGA +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFLLLFL*GHRIAG
Trigger: TCCAGCAATTCTGTGTCCTCAGAGGAAGAGGAGGAG...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR GCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCCTTTCAGATGATCCATaGGCTTGTGCACGGTCGTCC +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFLSDDP*ACARSS
Trigger: GGACGACCGTGCACAAGCGCATGGATCATCTGAAAG...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR GCA 90 bp AAGAGTTCGGCCATGAAATATTCTGCTATTACGAGAAATATTTCAGCCCGGGCAGGCGATGCTGTTAATTaGCTTGAGTTTCCGCAACTC +
Preference number: 4 (lower is better)
Translates to: KSSAMKYSAITRNISARAGDAVN*LEFPQL
Trigger: GAGTTGCGGAAACTCAAGGCAATTAACAGCATCGCC...TGCCCGGGCTGAAATATTTCTCGTAATAGCAGAATATTTCATGGCCGAACTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCCCCCGCCAAAGTTGGTaGTTGTCCTTCCAAAATCCC +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFPRQSW*LSFQNP
Trigger: GGGATTTTGGAAGGACAAGCACCAACTTTGGCGGGG...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR GCA 90 bp TGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTTAAAACCAGTTTAGAGGGGGTTTaGACGGCGAGCGCACGATCT +
Preference number: 4 (lower is better)
Translates to: CSDHKISRTIVRVTLFKTSLEGV*TASARS
Trigger: AGATCGTGCGCTCGCCGTGCAAACCCCCTCTAAACT...GGTTTTAAATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp AGGCAGCTTTTACTAGCATTTAATCAGGACTCACACCCCAATCTTTCCACTAAACTGAGGACACAGAATTaGTGGAGCTGGACAAACTGG +
Preference number: 4 (lower is better)
Translates to: RQLLLAFNQDSHPNLSTKLRTQN*WSWTNW
Trigger: CCAGTTTGTCCAGCTCCAGCAATTCTGTGTCCTCAG...TTTAGTGGAAAGATTGGGGTGTGAGTCCTGATTAAATGCTAGTAAAAGCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCCTGAATCGGATGCTCTaGACTGACACTTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFLNRML*TDTWLE
Trigger: CTCCAGCCAAGTGTCAGTGCAGAGCATCCGATTCAG...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR GCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCAGTTGCTGCTGCTCCTaGAGCGTTCACTTCAGGATC +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFSCCCS*SVHFRI
Trigger: GATCCTGAAGTGAACGCTGCAGGAGCAGCAGCAACT...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR GCA 90 bp AGAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTAGTTGCTGCTGCTCCTaGAGCGTTCACTTCAGGATC +
Preference number: 4 (lower is better)
Translates to: RVMFRPQDKQDNSKSHLISCCCS*SVHFRI
Trigger: GATCCTGAAGTGAACGCTGCAGGAGCAGCAGCAACT...AATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCGGCTTTAGTTGCTGCTaGTCCTGCAGCGTTCACTTC +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFGFSCC*SCSVHF
Trigger: GAAGTGAACGCTGCAGGAGCAGCAGCAACTAAAGCC...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR GCA 90 bp TGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTTAAAACCCTCGGCTTTAGTTGCTaGTGCTCCTGCAGCGTTCAC +
Preference number: 4 (lower is better)
Translates to: CSDHKISRTIVRVTLFKTLGFSC*CSCSVH
Trigger: GTGAACGCTGCAGGAGCAGCAGCAACTAAAGCCGAG...GGTTTTAAATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCGCAGAACCGCCCAGCTaGCATTTCCATATAGGATGG +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFAEPPS*HFHIGW
Trigger: CCATCCTATATGGAAATGGCAGCTGGGCGGTTCTGC...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR GCA 90 bp AATTTTGATTTACTGCTTCCATCATCACAACACAGTACACCAGCATGGCCCTTACAGCTACTGGGAACCTaGCCTGTTACAGTGACACAT +
Preference number: 4 (lower is better)
Translates to: NFDLLLPSSQHSTPAWPLQLLGT*PVTVTH
Trigger: ATGTGTCACTGTAACAGGGCAGGTTCCCAGTAGCTG...TAAGGGCCATGCTGGTGTACTGTGTTGTGATGATGGAAGCAGTAAATCAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTACTGTCTTTCACTGCTaGAGCTACTGGGAACCTGCC +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVTVFHC*SYWEPA
Trigger: GGCAGGTTCCCAGTAGCTGCAGCAGTGAAAGACAGT...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp TGCAGTAGAAACTCTCCTGCTCTATACACAGGATGGTCTGAAAACACAAGTTTTAGGCGGCTCCTTGGCTaGTTTGCAAAATTCGGCAAA +
Preference number: 4 (lower is better)
Translates to: CSRNSPALYTGWSENTSFRRLLG*FAKFGK
Trigger: TTTGCCGAATTTTGCAAAGCAGCCAAGGAGCCGCCT...AAAACTTGTGTTTTCAGACCATCCTGTGTATAGAGCAGGAGAGTTTCTACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GTCACTTGCAGTAGAAACTCTCCTGCTCTATACACAGGATGGTCTGAAAACACACCTCTGATTGTCACTTaGAGTAGAAACTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: VTCSRNSPALYTGWSENTPLIVT*SRNSPA
Trigger: AGCAGGAGAGTTTCTACTGCAAGTGACAATCAGAGG...TGTGTTTTCAGACCATCCTGTGTATAGAGCAGGAGAGTTTCTACTGCAAGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp ATCCGATTTCTGTCTTCAAAATGCGATAAACCAGGACTCCAAAGGGGGTGTAACCAAATTTGGTTTGACTaGAGGTGTCTGAAGGACAGG +
Preference number: 4 (lower is better)
Translates to: IRFLSSKCDKPGLQRGCNQIWFD*RCLKDR
Trigger: CCTGTCCTTCAGACACCTCCAGTCAAACCAAATTTG...GTTACACCCCCTTTGGAGTCCTGGTTTATCGCATTTTGAAGACAGAAATCGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp GTCACTTGCAGTAGAAACTCTCCTGCTCTATACACAGGATGGTCTGAAAACACACAAGTGCCTGAGTTCTaGTACCAAAAAGCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: VTCSRNSPALYTGWSENTQVPEF*YQKALK
Trigger: TTTCAGGGCTTTTTGGTACCAGAACTCAGGCACTTG...TGTGTTTTCAGACCATCCTGTGTATAGAGCAGGAGAGTTTCTACTGCAAGTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCCACCTCTTCAAAACCTaGCTTCAGGTCTCCCATCTC +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFHLFKT*LQVSHL
Trigger: GAGATGGGAGACCTGAAGTCAGGTTTTGAAGAGGTG...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR TCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTTATTTGCTAAAAATCTaGGGTAGATGGGCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVYLLKI*GRWAAG
Trigger: CCCCGCCGCCCATCTACCTCAGATTTTTAGCAAATA...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR TCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTTGGCCTTTTCACTGCTaGTGCTACATTGCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVWPFHC*CYIAGY
Trigger: GTAGCCAGCAATGTAGCATCAGCAGTGAAAAGGCCA...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR TCA 90 bp AGGCAGCTTTTACTAGCATTTAATCAGGACTCACACCCCAATCTTTCCACTAAACAAAATATTGCCAAATaGGAGCAAGGGTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RQLLLAFNQDSHPNLSTKQNIAK*EQGSSQ
Trigger: CTGGGAGGACCCTTGCTCTCATTTGGCAATATTTTG...TTTAGTGGAAAGATTGGGGTGTGAGTCCTGATTAAATGCTAGTAAAAGCTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp GAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTTAAACCATCCGGTTTCTaGTCTGCCAGTGTGTTGGTC +
Preference number: 4 (lower is better)
Translates to: ESCSDHKISRTIVRVTLFKPSGF*SASVLV
Trigger: GACCAACACACTGGCAGATCAGAAACCGGATGGTTT...AAATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp AATAACATTTTGGGCTCACAGAAACTTCTTGCTACCTCACCTCACCTCACTGTGGAGAGGGCAAACATTTaGTTCCCTTTAATGATGAGG +
Preference number: 4 (lower is better)
Translates to: NNILGSQKLLATSPHLTVERANI*FPLMMR
Trigger: CCTCATCATTAAAGGGAAGCAAATGTTTGCCCTCTC...CACAGTGAGGTGAGGTGAGGTAGCAAGAAGTTTCTGTGAGCCCAAAATGTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCCTGAGGACACAGAATTaGTGGAGCTGGACAAACTGG +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFLRTQN*WSWTNW
Trigger: CCAGTTTGTCCAGCTCCAGCAATTCTGTGTCCTCAG...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR GCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCATTCTCGGCTTTAGTTaGTGCTGCTCCTGCAGCGTT +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFILGFS*CCSCSV
Trigger: AACGCTGCAGGAGCAGCAGCAACTAAAGCCGAGAAT...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR GCA 90 bp AGGCAGCTTTTACTAGCATTTAATCAGGACTCACACCCCAATCTTTCCACTAAACTGCTGATGCTACATTaGTGGCTACCTTTTTGCGTC +
Preference number: 4 (lower is better)
Translates to: RQLLLAFNQDSHPNLSTKLLMLH*WLPFCV
Trigger: GACGCAAAAAGGTAGCCAGCAATGTAGCATCAGCAG...TTTAGTGGAAAGATTGGGGTGTGAGTCCTGATTAAATGCTAGTAAAAGCTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp TGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTTAAAACCGCAGAACCGCCCAGCTaGCATTTCCATATAGGATGG +
Preference number: 4 (lower is better)
Translates to: CSDHKISRTIVRVTLFKTAEPPS*HFHIGW
Trigger: CCATCCTATATGGAAATGGCAGCTGGGCGGTTCTGC...GGTTTTAAATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp TGCAGTAGAAACTCTCCTGCTCTATACACAGGATGGTCTGAAAACACAAGTTTTGAAAAGAAATGCAGCTaGTATTCCCGCCGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: CSRNSPALYTGWSENTSFEKKCS*YSRRCF
Trigger: AAAGCAGCGGCGGGAATAGCAGCTGCATTTCTTTTC...AAAACTTGTGTTTTCAGACCATCCTGTGTATAGAGCAGGAGAGTTTCTACTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp TGCAGTAGAAACTCTCCTGCTCTATACACAGGATGGTCTGAAAACACAAGTTTTTCCTCCAGATCGCAGTaGTGCTTCTTCACTTTCAGA +
Preference number: 4 (lower is better)
Translates to: CSRNSPALYTGWSENTSFSSRSQ*CFFTFR
Trigger: TCTGAAAGTGAAGAAGCACCACTGCGATCTGGAGGA...AAAACTTGTGTTTTCAGACCATCCTGTGTATAGAGCAGGAGAGTTTCTACTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCGTGCATTTGGCGGCGTaGAAGGCGATGCTGTTAATT +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFVHLAA*KAMLLI
Trigger: AATTAACAGCATCGCCTTCCACGCCGCCAAATGCAC...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CCA 90 bp AGAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTGTGCATTTGGCGGCGTaGAAGGCGATGCTGTTAATT +
Preference number: 4 (lower is better)
Translates to: RVMFRPQDKQDNSKSHLIVHLAA*KAMLLI
Trigger: AATTAACAGCATCGCCTTCCACGCCGCCAAATGCAC...AATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTAGGCCCCGCCAAAGTTaGTGCTTGTCCTTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVRPRQS*CLSFQN
Trigger: ATTTTGGAAGGACAAGCACCAACTTTGGCGGGGCCT...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCTGGAGCTGGACAAACTaGAGCCAAAATCCGAGTCGT +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFWSWTN*SQNPSR
Trigger: ACGACTCGGATTTTGGCTCCAGTTTGTCCAGCTCCA...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTTGGAGCTGGACAAACTaGAGCCAAAATCCGAGTCGT +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVWSWTN*SQNPSR
Trigger: ACGACTCGGATTTTGGCTCCAGTTTGTCCAGCTCCA...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCAGGACACAGAATTGCTaGAGCTGGACAAACTGGAGC +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFRTQNC*SWTNWS
Trigger: GCTCCAGTTTGTCCAGCTCCAGCAATTCTGTGTCCT...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CCA 90 bp AGAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTAGGACACAGAATTGCTaGAGCTGGACAAACTGGAGC +
Preference number: 4 (lower is better)
Translates to: RVMFRPQDKQDNSKSHLIRTQNC*SWTNWS
Trigger: GCTCCAGTTTGTCCAGCTCCAGCAATTCTGTGTCCT...AATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTAACCTTCCTTGGCTGTaGTTAACAAGGCGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVNLPWL*LTRRPP
Trigger: AGGAGGACGCCTTGTTAACCACAGCCAAGGAAGGTT...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CCA 90 bp AGAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTAAGGGAATCCTCTTCTaGTTCTGTTCCCCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: RVMFRPQDKQDNSKSHLIKGILF*FCSPGF
Trigger: GAAGCCAGGGGAACAGAACCAGAAGAGGATTCCCTT...AATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp AGAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTAAAGCCAGCGCTGATTaGACACTCCTGACAGGTGAT +
Preference number: 4 (lower is better)
Translates to: RVMFRPQDKQDNSKSHLIKASAD*TLLTGD
Trigger: ATCACCTGTCAGGAGTGTCCAATCAGCGCTGGCTTT...AATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTATCTCGGGCACTAAATaGTCCCCACCATTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVISGTK*SPPFAV
Trigger: TACTGCAAATGGTGGGGATCATTTAGTGCCCGAGAT...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR TCA 90 bp AGAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTATCTCGGGCACTAAATaGTCCCCACCATTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: RVMFRPQDKQDNSKSHLIISGTK*SPPFAV
Trigger: TACTGCAAATGGTGGGGATCATTTAGTGCCCGAGAT...AATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp TGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTTAAAACCCACCTCTTCAAAACCTaGCTTCAGGTCTCCCATCTC +
Preference number: 4 (lower is better)
Translates to: CSDHKISRTIVRVTLFKTHLFKT*LQVSHL
Trigger: GAGATGGGAGACCTGAAGTCAGGTTTTGAAGAGGTG...GGTTTTAAATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTTTTTCAGCAGATCTGTaGAGACTTGGGAGAGGGCAA +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVFSADL*RLGRGQ
Trigger: TTGCCCTCTCCCAAGTCTTCACAGATCTGCTGAAAA...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR TCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTTTCTTCACTTTCAGATaGTCCATGCGCTTGTGCACG +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVFFTFR*SMRLCT
Trigger: CGTGCACAAGCGCATGGATCATCTGAAAGTGAAGAA...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR TCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCTTCTTCACTTTCAGATaGTCCATGCGCTTGTGCACG +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFFFTFR*SMRLCT
Trigger: CGTGCACAAGCGCATGGATCATCTGAAAGTGAAGAA...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR TCA 90 bp AATAACATTTTGGGCTCACAGAAACTTCTTGCTACCTCACCTCACCTCACTGTGCCTGCCCTGTTACAGTaGCACATGTTTATGTTTATA +
Preference number: 4 (lower is better)
Translates to: NNILGSQKLLATSPHLTVPALLQ*HMFMFI
Trigger: TATAAACATAAACATGTGTCACTGTAACAGGGCAGG...CACAGTGAGGTGAGGTGAGGTAGCAAGAAGTTTCTGTGAGCCCAAAATGTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp AGGCAGCTTTTACTAGCATTTAATCAGGACTCACACCCCAATCTTTCCACTAAATTTCTGAGCTTTGCCTaGTGTGCAGATCCAGATGTA +
Preference number: 4 (lower is better)
Translates to: RQLLLAFNQDSHPNLSTKFLSFA*CADPDV
Trigger: TACATCTGGATCTGCACATCAGGCAAAGCTCAGAAA...TTTAGTGGAAAGATTGGGGTGTGAGTCCTGATTAAATGCTAGTAAAAGCTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp GAGCTCCAGAAAATAACATTTTGGGCTCACAGAAACTTCTTGCTACCTCACCTCTCAAGAGTTCGGCCATaGAATATTCTGCTATTACGA +
Preference number: 4 (lower is better)
Translates to: ELQKITFWAHRNFLLPHLSRVRP*NILLLR
Trigger: TCGTAATAGCAGAATATTTCATGGCCGAACTCTTGA...GAGGTGAGGTAGCAAGAAGTTTCTGTGAGCCCAAAATGTTATTTTCTGGAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCGGCGATGCTGTTAATTaGCTTGAGTTTCCGCAACTC +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFGDAVN*LEFPQL
Trigger: GAGTTGCGGAAACTCAAGGCAATTAACAGCATCGCC...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR GCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCACTTCAGGATCAGTCTaGGAAGAGGGCAAATCCGTA +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFTSGSV*EEGKSV
Trigger: TACGGATTTGCCCTCTTCGCAGACTGATCCTGAAGT...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR GCA 90 bp GTCACTTGCAGTAGAAACTCTCCTGCTCTATACACAGGATGGTCTGAAAACACACACCCTTTGTATCATTaGACTCGCACTTTAGCTTAT +
Preference number: 4 (lower is better)
Translates to: VTCSRNSPALYTGWSENTHPLYH*TRTLAY
Trigger: ATAAGCTAAAGTGCGAGTGCAATGATACAAAGGGTG...TGTGTTTTCAGACCATCCTGTGTATAGAGCAGGAGAGTTTCTACTGCAAGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp AAGAGTTCGGCCATGAAATATTCTGCTATTACGAGAAATATTTCAGCCCGGGCATTCTTTTTCAGGGCATaGAAAACCTTCCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: KSSAMKYSAITRNISARAFFFRA*KTFLGC
Trigger: ACAGCCAAGGAAGGTTTTGCATGCCCTGAAAAAGAA...TGCCCGGGCTGAAATATTTCTCGTAATAGCAGAATATTTCATGGCCGAACTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCTGCTGATGCTACATTaGTGGCTACCTTTTTGCGTC +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVLLMLH*WLPFCV
Trigger: GACGCAAAAAGGTAGCCAGCAATGTAGCATCAGCAG...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR GCA 90 bp TGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTTAAAACCGCTGACTCTATGGGCTaGTCAGCCATACTGAAATCC +
Preference number: 4 (lower is better)
Translates to: CSDHKISRTIVRVTLFKTADSMG*SAILKS
Trigger: GGATTTCAGTATGGCTGAGCAGCCCATAGAGTCAGC...GGTTTTAAATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp AGAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTGTCAAACGCCCAAGGTaGTTCCAGAGGTTTTACGTA +
Preference number: 4 (lower is better)
Translates to: RVMFRPQDKQDNSKSHLIVKRPR*FQRFYV
Trigger: TACGTAAAACCTCTGGAAGCACCTTGGGCGTTTGAC...AATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTTTTCCAGGGAGCAGATTaGTTCCTTCTGCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: ESCSDHKISRTIVRVTLFFQGAD*FLLQQR
Trigger: TCTTTGCTGCAGAAGGAAGCAATCTGCTCCCTGGAA...AAATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp AGAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTGAAAGAGAAAAGAAATaGAGCTGCTATTCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: RVMFRPQDKQDNSKSHLIEREKK*SCYSRR
Trigger: GCGGCGGGAATAGCAGCTGCATTTCTTTTCTCTTTC...AATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTTCTCACAGAAACTTCTTaGTACCTCACCTCACCTCAC +
Preference number: 4 (lower is better)
Translates to: ESCSDHKISRTIVRVTLFLTETS*YLTSPH
Trigger: GTGAGGTGAGGTGAGGTAGCAAGAAGTTTCTGTGAG...AAATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTTCCTCCAGATCGCAGTaGTGCTTCTTCACTTTCAGA +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVSSRSQ*CFFTFR
Trigger: TCTGAAAGTGAAGAAGCACCACTGCGATCTGGAGGA...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CCA 90 bp TGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTTAAAACCAACCTTCCTTGGCTGTaGTTAACAAGGCGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: CSDHKISRTIVRVTLFKTNLPWL*LTRRPP
Trigger: AGGAGGACGCCTTGTTAACCACAGCCAAGGAAGGTT...GGTTTTAAATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp AGAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTATTTCAGCCCGGGCATaGTGGATCACACCTTTAATC +
Preference number: 4 (lower is better)
Translates to: RVMFRPQDKQDNSKSHLIISARA*WITPLI
Trigger: GATTAAAGGTGTGATCCACCATGCCCGGGCTGAAAT...AATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp GTCACTTGCAGTAGAAACTCTCCTGCTCTATACACAGGATGGTCTGAAAACACAAATTTCCTGAATTTGTaGCTAGGTGGAAGAGGTATT +
Preference number: 4 (lower is better)
Translates to: VTCSRNSPALYTGWSENTNFLNL*LGGRGI
Trigger: AATACCTCTTCCACCTAGTCACAAATTCAGGAAATT...TGTGTTTTCAGACCATCCTGTGTATAGAGCAGGAGAGTTTCTACTGCAAGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp AGAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTAATAAAATGACAGAGTaGAGTGAGCTCGTCCGGAGA +
Preference number: 4 (lower is better)
Translates to: RVMFRPQDKQDNSKSHLINKMTE*SELVRR
Trigger: TCTCCGGACGAGCTCACTTCACTCTGTCATTTTATT...AATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GTCACTTGCAGTAGAAACTCTCCTGCTCTATACACAGGATGGTCTGAAAACACAATGATCCCCACCATTTaGAGTAAATATATACGTGAC +
Preference number: 4 (lower is better)
Translates to: VTCSRNSPALYTGWSENTMIPTI*SKYIRD
Trigger: GTCACGTATATATTTACTGCAAATGGTGGGGATCAT...TGTGTTTTCAGACCATCCTGTGTATAGAGCAGGAGAGTTTCTACTGCAAGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp ATCCGATTTCTGTCTTCAAAATGCGATAAACCAGGACTCCAAAGGGGGTGTAACTATTGTGTTGTTATCTaGACAGTGTGTAGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: IRFLSSKCDKPGLQRGCNYCVVI*TVCSRS
Trigger: ACTCCTACTACACACTGTGCAGATAACAACACAATA...GTTACACCCCCTTTGGAGTCCTGGTTTATCGCATTTTGAAGACAGAAATCGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp TGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTTAAAACCATCCGGTTTCTGATCTaGCAGTGTGTTGGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: CSDHKISRTIVRVTLFKTIRFLI*QCVGLS
Trigger: ACTCAGACCAACACACTGGCAGATCAGAAACCGGAT...GGTTTTAAATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GAGCTCCAGAAAATAACATTTTGGGCTCACAGAAACTTCTTGCTACCTCACCTCTTTCTGTCTTCAAAATaGGATAAACCAGGACTCCAA +
Preference number: 4 (lower is better)
Translates to: ELQKITFWAHRNFLLPHLFLSSK*DKPGLQ
Trigger: TTGGAGTCCTGGTTTATCGCATTTTGAAGACAGAAA...GAGGTGAGGTAGCAAGAAGTTTCTGTGAGCCCAAAATGTTATTTTCTGGAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCCAAATTTGGTTTGACTaGAGGTGTCTGAAGGACAGG +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFQIWFD*RCLKDR
Trigger: CCTGTCCTTCAGACACCTCCAGTCAAACCAAATTTG...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCCTGATGCTACATTGCTaGCTACCTTTTTGCGTCTGT +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFLMLHC*LPFCVC
Trigger: ACAGACGCAAAAAGGTAGCCAGCAATGTAGCATCAG...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CCA 90 bp AATTTTGATTTACTGCTTCCATCATCACAACACAGTACACCAGCATGGCCCTTAGTGCGGACTTACGTTTaGAATTTCTCTCGATTTTCC +
Preference number: 4 (lower is better)
Translates to: NFDLLLPSSQHSTPAWPLVRTYV*NFSRFS
Trigger: GGAAAATCGAGAGAAATTCCAAACGTAAGTCCGCAC...TAAGGGCCATGCTGGTGTACTGTGTTGTGATGATGGAAGCAGTAAATCAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTAAGTGCAACTACTCTTaGAGAGGGAATAAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVKCNYS*RGNKGS
Trigger: ACTCCCCTTATTCCCTCTCCAAGAGTAGTTGCACTT...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp GAGCTCCAGAAAATAACATTTTGGGCTCACAGAAACTTCTTGCTACCTCACCTCGCTCTATACACAGGATaGTCTGAAAACACAAGTTTT +
Preference number: 4 (lower is better)
Translates to: ELQKITFWAHRNFLLPHLALYTG*SENTSF
Trigger: AAAACTTGTGTTTTCAGACCATCCTGTGTATAGAGC...GAGGTGAGGTAGCAAGAAGTTTCTGTGAGCCCAAAATGTTATTTTCTGGAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCACGAGGGCTTCTAGCTaGTTTCAAATTTGGTTTGAC +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFTRASS*FQIWFD
Trigger: GTCAAACCAAATTTGAAATCAGCTAGAAGCCCTCGT...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR TCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCTTTATTTGTAGCAGTTaGATTGAGGTACCGGGTGCA +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFFICSS*IEVPGA
Trigger: TGCACCCGGTACCTCAATTCAACTGCTACAAATAAA...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCGAGAGGGCAAACATTTaGTTCCCTTTAATGATGAGG +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFERANI*FPLMMR
Trigger: CCTCATCATTAAAGGGAAGCAAATGTTTGCCCTCTC...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR GCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCTTCTTTTTCAGGGCATaGAAAACCTTCCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFFFFRA*KTFLGC
Trigger: ACAGCCAAGGAAGGTTTTGCATGCCCTGAAAAAGAA...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR GCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTGATATTTCTGAGCTTTaGCTGATGTGCAGATCCAGA +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVDISEL*LMCRSR
Trigger: TCTGGATCTGCACATCAGGCAAAGCTCAGAAATATC...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCGCTCCTTGGCTGCTTTaGAAAATTCGGCAAAATCTT +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFAPWLL*KIRQNL
Trigger: AAGATTTTGCCGAATTTTGCAAAGCAGCCAAGGAGC...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp AGGCAGCTTTTACTAGCATTTAATCAGGACTCACACCCCAATCTTTCCACTAAAGGATATCCAAAATATTaGCAAATGAGAGCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: RQLLLAFNQDSHPNLSTKGYPKY*QMRARV
Trigger: GACCCTTGCTCTCATTTGGCAATATTTTGGATATCC...TTTAGTGGAAAGATTGGGGTGTGAGTCCTGATTAAATGCTAGTAAAAGCTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCAGTGCTGATGTACGATaGAGACTGTTTCAGTGGTTT +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFSADVR*RLFQWF
Trigger: AAACCACTGAAACAGTCTGCATCGTACATCAGCACT...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp AAGAGTTCGGCCATGAAATATTCTGCTATTACGAGAAATATTTCAGCCCGGGCAGGAAATTTCAGAGTGTaGGAATGTAATCTCAGATAC +
Preference number: 4 (lower is better)
Translates to: KSSAMKYSAITRNISARAGNFRV*ECNLRY
Trigger: GTATCTGAGATTACATTCCCACACTCTGAAATTTCC...TGCCCGGGCTGAAATATTTCTCGTAATAGCAGAATATTTCATGGCCGAACTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp TGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTTAAAACCCTGATGCTACATTGCTaGCTACCTTTTTGCGTCTGT +
Preference number: 4 (lower is better)
Translates to: CSDHKISRTIVRVTLFKTLMLHC*LPFCVC
Trigger: ACAGACGCAAAAAGGTAGCCAGCAATGTAGCATCAG...GGTTTTAAATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCGAATTTGTGACTAGGTaGAAGAGGTATTGCAGAACC +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFEFVTR*KRYCRT
Trigger: GGTTCTGCAATACCTCTTCCACCTAGTCACAAATTC...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CCA 90 bp AGAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTATGTGCAGAATAGCCTaGTATTTCCCTTACAGGAGT +
Preference number: 4 (lower is better)
Translates to: RVMFRPQDKQDNSKSHLIMCRIA*YFPYRS
Trigger: ACTCCTGTAAGGGAAATACCAGGCTATTCTGCACAT...AATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTATTTCAAATTTGGTTTaGCTGGAGGTGTCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVISNLV*LEVSEG
Trigger: TCCTTCAGACACCTCCAGTCAAACCAAATTTGAAAT...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR TCA 90 bp AGAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTATTTCAAATTTGGTTTaGCTGGAGGTGTCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: RVMFRPQDKQDNSKSHLIISNLV*LEVSEG
Trigger: TCCTTCAGACACCTCCAGTCAAACCAAATTTGAAAT...AATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp TGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTTAAAACCACGAGGGCTTCTAGCTaGTTTCAAATTTGGTTTGAC +
Preference number: 4 (lower is better)
Translates to: CSDHKISRTIVRVTLFKTTRASS*FQIWFD
Trigger: GTCAAACCAAATTTGAAATCAGCTAGAAGCCCTCGT...GGTTTTAAATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCTCTCCCAATAATGAGTaGTGGTGGACAAGGAAAATT +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFSPNNE*WWTRKI
Trigger: AATTTTCCTTGTCCACCATCACTCATTATTGGGAGA...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR TCA 90 bp GAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTTTCTCCCAATAATGAGTaGTGGTGGACAAGGAAAATT +
Preference number: 4 (lower is better)
Translates to: ESCSDHKISRTIVRVTLFSPNNE*WWTRKI
Trigger: AATTTTCCTTGTCCACCATCACTCATTATTGGGAGA...AAATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp AGAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTTGTTTCAGTGGTTTGTaGTGCTTTTGGTTGGTAGTT +
Preference number: 4 (lower is better)
Translates to: RVMFRPQDKQDNSKSHLICFSGL*CFWLVV
Trigger: AACTACCAACCAAAAGCATCACAAACCACTGAAACA...AATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp GAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTTATGAAAAGAAAGTGCTaGTGTACGATGCAGACTGTT +
Preference number: 4 (lower is better)
Translates to: ESCSDHKISRTIVRVTLFMKRKC*CTMQTV
Trigger: AACAGTCTGCATCGTACATCAGCACTTTCTTTTCAT...AAATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTATTGTTTTGGGAGTTTaGAGAGTCATGTTCAGACCA +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVIVLGV*RVMFRP
Trigger: TGGTCTGAACATGACTCTTCAAACTCCCAAAACAAT...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp GAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTTATAGATAGTCACCTCTaGTTGTCACTTGCAGTAGAA +
Preference number: 4 (lower is better)
Translates to: ESCSDHKISRTIVRVTLFIDSHL*LSLAVE
Trigger: TTCTACTGCAAGTGACAATCAGAGGTGACTATCTAT...AAATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCCACCCTTTGTATCATTaGACTCGCACTTTAGCTTAT +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFHPLYH*TRTLAY
Trigger: ATAAGCTAAAGTGCGAGTGCAATGATACAAAGGGTG...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR GCA 90 bp TGCAGTAGAAACTCTCCTGCTCTATACACAGGATGGTCTGAAAACACAAGTTTTGTACAAACCATCCTGTaGAGTTTACAACAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: CSRNSPALYTGWSENTSFVQTIL*SLQQKE
Trigger: TTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTAC...AAAACTTGTGTTTTCAGACCATCCTGTGTATAGAGCAGGAGAGTTTCTACTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCAATATTGTGCAGAAATaGCAATGTCTTGTCGCCTGT +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFNIVQK*QCLVAC
Trigger: ACAGGCGACAAGACATTGCCATTTCTGCACAATATT...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CCA 90 bp GAAACAGTAAAGTGTTCCAGCTCTACCGTAATAACTGAGTTTTACTTGAGTCTTGAATTTGTGACTAGGTaGAAGAGGTATTGCAGAACC +
Preference number: 4 (lower is better)
Translates to: ETVKCSSSTVITEFYLSLEFVTR*KRYCRT
Trigger: GGTTCTGCAATACCTCTTCCACCTAGTCACAAATTC...AAGACTCAAGTAAAACTCAGTTATTACGGTAGAGCTGGAACACTTTACTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR TCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCAATTTCCTGAATTTGTaGCTAGGTGGAAGAGGTATT +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFNFLNL*LGGRGI
Trigger: AATACCTCTTCCACCTAGTCACAAATTCAGGAAATT...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR GCA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCATGATCCCCACCATTTaGAGTAAATATATACGTGAC +
Preference number: 4 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFMIPTI*SKYIRD
Trigger: GTCACGTATATATTTACTGCAAATGGTGGGGATCAT...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR GCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTTCTTTGTTGTGGAAATaGATTGTTTGTCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVSLLWK*IVCLWA
Trigger: AGCCCAAAGACAAACAATGCATTTCCACAACAAAGA...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR GCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTTATTGTGTTGTTATCTaGACAGTGTGTAGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVYCVVI*TVCSRS
Trigger: ACTCCTACTACACACTGTGCAGATAACAACACAATA...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR GCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTGTACAAACCATCCTGTaGAGTTTACAACAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVVQTIL*SLQQKE
Trigger: TTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTAC...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR GCA 90 bp TGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTTAAAACCGTCATAAAATCCAAGTaGCTGAGTTCTGGTACCAAA +
Preference number: 4 (lower is better)
Translates to: CSDHKISRTIVRVTLFKTVIKSK*LSSGTK
Trigger: TTTGGTACCAGAACTCAGGCACTTGGATTTTATGAC...GGTTTTAAATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCTAGACCCTAGCATTTaGATGTTGAACTACTTTGAT +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVLDPSI*MLNYFD
Trigger: ATCAAAGTAGTTCAACATGCAAATGCTAGGGTCTAG...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTGGAAATTTCAGAGTGTaGGAATGTAATCTCAGATAC +
Preference number: 4 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVGNFRV*ECNLRY
Trigger: GTATCTGAGATTACATTCCCACACTCTGAAATTTCC...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CCA 90 bp GAAACAGTAAAGTGTTCCAGCTCTACCGTAATAACTGAGTTTTACTTGAGTCTTAATATTGTGCAGAAATaGCAATGTCTTGTCGCCTGT +
Preference number: 4 (lower is better)
Translates to: ETVKCSSSTVITEFYLSLNIVQK*QCLVAC
Trigger: ACAGGCGACAAGACATTGCCATTTCTGCACAATATT...AAGACTCAAGTAAAACTCAGTTATTACGGTAGAGCTGGAACACTTTACTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp TGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTTAAAACCTCCTTCCTTCTCCATTaGAGCACTATGATAATGGAA +
Preference number: 4 (lower is better)
Translates to: CSDHKISRTIVRVTLFKTSFLLH*STMIME
Trigger: TTCCATTATCATAGTGCTCCAATGGAGAAGGAAGGA...GGTTTTAAATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR GCA 90 bp GAAACAGTAAAGTGTTCCAGCTCTACCGTAATAACTGAGTTTTACTTGAGTCTTTCTTTGTTGTGGAAATaGATTGTTTGTCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: ETVKCSSSTVITEFYLSLSLLWK*IVCLWA
Trigger: AGCCCAAAGACAAACAATGCATTTCCACAACAAAGA...AAGACTCAAGTAAAACTCAGTTATTACGGTAGAGCTGGAACACTTTACTGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CCA 90 bp GAAACAGTAAAGTGTTCCAGCTCTACCGTAATAACTGAGTTTTACTTGAGTCTTCTGTTATTTTTCATTTaGGGTATTGCAACTCTGACC +
Preference number: 4 (lower is better)
Translates to: ETVKCSSSTVITEFYLSLLLFFI*GIATLT
Trigger: GGTCAGAGTTGCAATACCCCAAATGAAAAATAACAG...AAGACTCAAGTAAAACTCAGTTATTACGGTAGAGCTGGAACACTTTACTGTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS GCA 90 bp CGCCGGCGTGAGGCGCGAGCAGGCAGTCCTTGGCGCCGCCGCGCTTaGGCTTGCAGCGGTAGCTCAGGCTCCCCGGGCCTCCGGCGCCCG +
Preference number: 5 (lower is better)
Translates to: RRREARAGSPWRRRA*ACSGSSGSPGLRRP
Trigger: CGGGCGCCGGAGGCCCGGGGAGCCTGAGCTACCGCTGCAAGCGCAAGCGCGGCGGCGCCAAGGACTGCCTGCTCGCGCCTCACGCCGGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS CCA 90 bp CTGCCGCCGCCGCCGCCGCCGCCGCCGCCTTGGCTTTGTAGGACCTaGGCAACAGCAGCAGGCGCCGCGCGCCGGCGTGAGGCGCGAGCA +
Preference number: 5 (lower is better)
Translates to: LPPPPPPPPPWLCRT*ATAAGAARRREARA
Trigger: TGCTCGCGCCTCACGCCGGCGCGCGGCGCCTGCTGCTGTTGCCCAGGTCCTACAAAGCCAAGGCGGCGGCGGCGGCGGCGGCGGCGGCAG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS GCA 90 bp CGTGAGGCGCGAGCAGGCAGTCCTTGGCGCCGCCGCGCTTGCGCTTaGAGCGGTAGCTCAGGCTCCCCGGGCCTCCGGCGCCCGCCGCTG +
Preference number: 5 (lower is better)
Translates to: REARAGSPWRRRACA*SGSSGSPGLRRPPL
Trigger: CAGCGGCGGGCGCCGGAGGCCCGGGGAGCCTGAGCTACCGCTGCAAGCGCAAGCGCGGCGGCGCCAAGGACTGCCTGCTCGCGCCTCACG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS CCA 90 bp GCAGCAGGCGCCGCGCGCCGGCGTGAGGCGCGAGCAGGCAGTCCTTaGCGCCGCCGCGCTTGCGCTTGCAGCGGTAGCTCAGGCTCCCCG +
Preference number: 5 (lower is better)
Translates to: AAGAARRREARAGSP*RRRACACSGSSGSP
Trigger: CGGGGAGCCTGAGCTACCGCTGCAAGCGCAAGCGCGGCGGCGCCAAGGACTGCCTGCTCGCGCCTCACGCCGGCGCGCGGCGCCTGCTGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS GCA 90 bp GGCGGCGGCGGCGGCAGCAGCGGCGGCGGCGGCGGCGGCGGCGGCTaGCGGGTGTTTGCTGCACAGCAGGCTCCGAAAATAAGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: GGGGGSSGGGGGGGG*RVFAAQQAPKISRV
Trigger: GACCCTGCTTATTTTCGGAGCCTGCTGTGCAGCAAACACCCGGCAGCCGCCGCCGCCGCCGCCGCCGCCGCTGCTGCCGCCGCCGCCGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS GCA 90 bp CCGCCGCCGCTGCCGCCGCCGCCGCCGCCGCCGCCGCCGGGTGTTTaGTGCACAGCAGGCTCCGAAAATAAGCAGGGTCCGAGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: PPPLPPPPPPPPPGV*CTAGSENKQGPRGR
Trigger: CCTTCCCCTCGGACCCTGCTTATTTTCGGAGCCTGCTGTGCAGCAAACACCCGGCGGCGGCGGCGGCGGCGGCGGCGGCAGCGGCGGCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444772.3
CDS GCA 90 bp CCGCCGCTGCCGCCGCCGCCGCCGCCGCCGCCGCCGGGTGTTTGCTaGACAGCAGGCTCCGAAAATAAGCAGGGTCCGAGGGGAAGGCGA +
Preference number: 5 (lower is better)
Translates to: PPLPPPPPPPPPGVC*TAGSENKQGPRGRR
Trigger: TCGCCTTCCCCTCGGACCCTGCTTATTTTCGGAGCCTGCTGTGCAGCAAACACCCGGCGGCGGCGGCGGCGGCGGCGGCGGCAGCGGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444772.3
CDS GCA 90 bp CGGCAGCAGCGGCGGCGGCGGCGGCGGCGGCGGCTGCCGGGTGTTTaGTGCACAGCAGGCTCCGAAAATAAGCAGGGTCCGAGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: RQQRRRRRRRRLPGV*CTAGSENKQGPRGR
Trigger: CCTTCCCCTCGGACCCTGCTTATTTTCGGAGCCTGCTGTGCAGCAAACACCCGGCAGCCGCCGCCGCCGCCGCCGCCGCCGCTGCTGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS GCA 90 bp CAGCAGCGGCGGCGGCGGCGGCGGCGGCGGCTGCCGGGTGTTTGCTaGACAGCAGGCTCCGAAAATAAGCAGGGTCCGAGGGGAAGGCGA +
Preference number: 5 (lower is better)
Translates to: QQRRRRRRRRLPGVC*TAGSENKQGPRGRR
Trigger: TCGCCTTCCCCTCGGACCCTGCTTATTTTCGGAGCCTGCTGTGCAGCAAACACCCGGCAGCCGCCGCCGCCGCCGCCGCCGCCGCTGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS GCA 90 bp CGTTGGCCGCGTGGTCCGAGTAGGAGCTGGACTCGGAGTCGCTGCTaGAGCTCTCGGGAAAGCTGCCCAGATGGGGCTGCGGCCGGTGGT +
Preference number: 5 (lower is better)
Translates to: RWPRGPSRSWTRSRC*SSRESCPDGAAAGG
Trigger: ACCACCGGCCGCAGCCCCATCTGGGCAGCTTTCCCGAGAGCTGCAGCAGCGACTCCGAGTCCAGCTCCTACTCGGACCACGCGGCCAACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS TCA 90 bp GCGCCTTTGTGGCCAGGGCCCGGCCGACCCGCCTGCGCTTGGTCTTaGGGACGCGCTCGGTTTTGCAGGAGGTGTAGAGCGCTTCCACGT +
Preference number: 5 (lower is better)
Translates to: APLWPGPGRPACAWS*GRARFCRRCRALPR
Trigger: ACGTGGAAGCGCTCTACACCTCCTGCAAAACCGAGCGCGTCCTCAAGACCAAGCGCAGGCGGGTCGGCCGGGCCCTGGCCACAAAGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS GCA 90 bp AGTCGTTGGCCGCGTGGTCCGAGTAGGAGCTGGACTCGGAGTCGCTaGTGCAGCTCTCGGGAAAGCTGCCCAGATGGGGCTGCGGCCGGT +
Preference number: 5 (lower is better)
Translates to: SRWPRGPSRSWTRSR*CSSRESCPDGAAAG
Trigger: ACCGGCCGCAGCCCCATCTGGGCAGCTTTCCCGAGAGCTGCAGCAGCGACTCCGAGTCCAGCTCCTACTCGGACCACGCGGCCAACGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CCA 90 bp CGGGTTTGGTTGCAGCGGCGGCGGAGGCCAGATGGTACAAGAAGTTaGCCTGCGCCTGCACGCTGGGAGGCTTGCAGAAGCTGGTGCGCC +
Preference number: 5 (lower is better)
Translates to: RVWLQRRRRPDGTRS*PAPARWEACRSWCA
Trigger: GGCGCACCAGCTTCTGCAAGCCTCCCAGCGTGCAGGCGCAGGCCAACTTCTTGTACCATCTGGCCTCCGCCGCCGCTGCAACCAAACCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS GCA 90 bp GCAGCGGCGGCGGAGGCCAGATGGTACAAGAAGTTGGCCTGCGCCTaGACGCTGGGAGGCTTGCAGAAGCTGGTGCGCCTGAATCGGATG +
Preference number: 5 (lower is better)
Translates to: AAAAEARWYKKLACA*TLGGLQKLVRLNRM
Trigger: CATCCGATTCAGGCGCACCAGCTTCTGCAAGCCTCCCAGCGTGCAGGCGCAGGCCAACTTCTTGTACCATCTGGCCTCCGCCGCCGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS GCA 90 bp CTCAGCGAAACAACTCCCCAGGCTGGCCGGGCAGTACACCGGAGATaGTTTGGGGGCCCAGCTCTGCAGATTCCACTCCGCCGGCGACTC +
Preference number: 5 (lower is better)
Translates to: LSETTPQAGRAVHRR*FGGPALQIPLRRRL
Trigger: GAGTCGCCGGCGGAGTGGAATCTGCAGAGCTGGGCCCCCAAAGCATCTCCGGTGTACTGCCCGGCCAGCCTGGGGAGTTGTTTCGCTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CCA 90 bp CGAAACAACTCCCCAGGCTGGCCGGGCAGTACACCGGAGATGCTTTaGGGGCCCAGCTCTGCAGATTCCACTCCGCCGGCGACTCCGCTT +
Preference number: 5 (lower is better)
Translates to: RNNSPGWPGSTPEML*GPSSADSTPPATPL
Trigger: AAGCGGAGTCGCCGGCGGAGTGGAATCTGCAGAGCTGGGCCCCCAAAGCATCTCCGGTGTACTGCCCGGCCAGCCTGGGGAGTTGTTTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS GCA 90 bp GAGGTCGGGAAGTCTGCCGGCATCCTCGAAAGCAGCGGGTTTGGTTaGAGCGGCGGCGGAGGCCAGATGGTACAAGAAGTTGGCCTGCGC +
Preference number: 5 (lower is better)
Translates to: EVGKSAGILESSGFG*SGGGGQMVQEVGLR
Trigger: GCGCAGGCCAACTTCTTGTACCATCTGGCCTCCGCCGCCGCTGCAACCAAACCCGCTGCTTTCGAGGATGCCGGCAGACTTCCCGACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS TCA 90 bp GGGAGGCTTGCAGAAGCTGGTGCGCCTGAATCGGATGCTCTGCACTaGCACTTGGCTGGAGCCGGAGCTGGAGTCCGACTCGGTGGACGA +
Preference number: 5 (lower is better)
Translates to: GRLAEAGAPESDALH*HLAGAGAGVRLGGR
Trigger: TCGTCCACCGAGTCGGACTCCAGCTCCGGCTCCAGCCAAGTGTCAGTGCAGAGCATCCGATTCAGGCGCACCAGCTTCTGCAAGCCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS GCA 90 bp ACGCTGGGAGGCTTGCAGAAGCTGGTGCGCCTGAATCGGATGCTCTaGACTGACACTTGGCTGGAGCCGGAGCTGGAGTCCGACTCGGTG +
Preference number: 5 (lower is better)
Translates to: TLGGLQKLVRLNRML*TDTWLEPELESDSV
Trigger: CACCGAGTCGGACTCCAGCTCCGGCTCCAGCCAAGTGTCAGTGCAGAGCATCCGATTCAGGCGCACCAGCTTCTGCAAGCCTCCCAGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS GCA 90 bp TTGGTTGCAGCGGCGGCGGAGGCCAGATGGTACAAGAAGTTGGCCTaGGCCTGCACGCTGGGAGGCTTGCAGAAGCTGGTGCGCCTGAAT +
Preference number: 5 (lower is better)
Translates to: LVAAAAEARWYKKLA*ACTLGGLQKLVRLN
Trigger: ATTCAGGCGCACCAGCTTCTGCAAGCCTCCCAGCGTGCAGGCGCAGGCCAACTTCTTGTACCATCTGGCCTCCGCCGCCGCTGCAACCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CCA 90 bp TGGAGCCAAAATCCGAGTCGTTGGCCGCGTGGTCCGAGTAGGAGCTaGACTCGGAGTCGCTGCTGCAGCTCTCGGGAAAGCTGCCCAGAT +
Preference number: 5 (lower is better)
Translates to: WSQNPSRWPRGPSRS*TRSRCCSSRESCPD
Trigger: ATCTGGGCAGCTTTCCCGAGAGCTGCAGCAGCGACTCCGAGTCCAGCTCCTACTCGGACCACGCGGCCAACGACTCGGATTTTGGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CCA 90 bp TTGCAGAAGCTGGTGCGCCTGAATCGGATGCTCTGCACTGACACTTaGCTGGAGCCGGAGCTGGAGTCCGACTCGGTGGACGAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: LQKLVRLNRMLCTDT*LEPELESDSVDESS
Trigger: GGAGGACTCGTCCACCGAGTCGGACTCCAGCTCCGGCTCCAGCCAAGTGTCAGTGCAGAGCATCCGATTCAGGCGCACCAGCTTCTGCAA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CCA 90 bp CAGAATTGCTGGAGCTGGACAAACTGGAGCCAAAATCCGAGTCGTTaGCCGCGTGGTCCGAGTAGGAGCTGGACTCGGAGTCGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: QNCWSWTNWSQNPSR*PRGPSRSWTRSRCC
Trigger: GCAGCAGCGACTCCGAGTCCAGCTCCTACTCGGACCACGCGGCCAACGACTCGGATTTTGGCTCCAGTTTGTCCAGCTCCAGCAATTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CCA 90 bp CTCCCTCCTCCTCCTCTTCCTCTGAGGACACAGAATTGCTGGAGCTaGACAAACTGGAGCCAAAATCCGAGTCGTTGGCCGCGTGGTCCG +
Preference number: 5 (lower is better)
Translates to: LPPPPLPLRTQNCWS*TNWSQNPSRWPRGP
Trigger: CGGACCACGCGGCCAACGACTCGGATTTTGGCTCCAGTTTGTCCAGCTCCAGCAATTCTGTGTCCTCAGAGGAAGAGGAGGAGGAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS GCA 90 bp CCTCCTCCTCTCCCTCCTCCTCCTCTTCCTCTGAGGACACAGAATTaGTGGAGCTGGACAAACTGGAGCCAAAATCCGAGTCGTTGGCCG +
Preference number: 5 (lower is better)
Translates to: PPPLPPPPLPLRTQN*WSWTNWSQNPSRWP
Trigger: CGGCCAACGACTCGGATTTTGGCTCCAGTTTGTCCAGCTCCAGCAATTCTGTGTCCTCAGAGGAAGAGGAGGAGGAGGGAGAGGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CCA 90 bp AGCGCTTCCACGTCTTCCCGGGAGATGAGCGTGCATTTGGCGGCGTaGAAGGCGATGCTGTTAATTGCCTTGAGTTTCCGCAACTCCTCC +
Preference number: 5 (lower is better)
Translates to: SASTSSREMSVHLAA*KAMLLIALSFRNSS
Trigger: GGAGGAGTTGCGGAAACTCAAGGCAATTAACAGCATCGCCTTCCACGCCGCCAAATGCACGCTCATCTCCCGGGAAGACGTGGAAGCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CCA 90 bp CCTCCTCTTCCTCTGAGGACACAGAATTGCTGGAGCTGGACAAACTaGAGCCAAAATCCGAGTCGTTGGCCGCGTGGTCCGAGTAGGAGC +
Preference number: 5 (lower is better)
Translates to: PPLPLRTQNCWSWTN*SQNPSRWPRGPSRS
Trigger: GCTCCTACTCGGACCACGCGGCCAACGACTCGGATTTTGGCTCCAGTTTGTCCAGCTCCAGCAATTCTGTGTCCTCAGAGGAAGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CCA 90 bp CCTCCTCTCCCTCCTCCTCCTCTTCCTCTGAGGACACAGAATTGCTaGAGCTGGACAAACTGGAGCCAAAATCCGAGTCGTTGGCCGCGT +
Preference number: 5 (lower is better)
Translates to: PPLPPPPLPLRTQNC*SWTNWSQNPSRWPR
Trigger: ACGCGGCCAACGACTCGGATTTTGGCTCCAGTTTGTCCAGCTCCAGCAATTCTGTGTCCTCAGAGGAAGAGGAGGAGGAGGGAGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS GCA 90 bp ACTGGATTGGAGGCGGGATCGTCCAAGAGTCCCCAGCAAAGCCTTTaGCAGGGTCCTGTTCACCACAGGTCAGAATTCCAGGGAGCAGAT +
Preference number: 5 (lower is better)
Translates to: TGLEAGSSKSPQQSL*QGPVHHRSEFQGAD
Trigger: ATCTGCTCCCTGGAATTCTGACCTGTGGTGAACAGGACCCTGGCAAAGGCTTTGCTGGGGACTCTTGGACGATCCCGCCTCCAATCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449193.7
ENST00000633225.1
CDS TCA 90 bp CTCCTCTTCCTCCTCCTCCTCCTCTCCCTCCTCCTCCTCTTCCTCTaGGGACACAGAATTGCTGGAGCTGGACAAACTGGAGCCAAAATC +
Preference number: 5 (lower is better)
Translates to: LLFLLLLLSLLLLFL*GHRIAGAGQTGAKI
Trigger: GATTTTGGCTCCAGTTTGTCCAGCTCCAGCAATTCTGTGTCCTCAGAGGAAGAGGAGGAGGAGGGAGAGGAGGAGGAGGAGGAAGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS GCA 90 bp GCCTGTGTCAGTGCAGGGATTCTCGGCTTTAGTTGCTGCTGCTCCTaGAGCGTTCACTTCAGGATCAGTCTGCGAAGAGGGCAAATCCGT +
Preference number: 5 (lower is better)
Translates to: ACVSAGILGFSCCCS*SVHFRISLRRGQIR
Trigger: ACGGATTTGCCCTCTTCGCAGACTGATCCTGAAGTGAACGCTGCAGGAGCAGCAGCAACTAAAGCCGAGAATCCCTGCACTGACACAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS GCA 90 bp CTTGTCGCCTGTGTCAGTGCAGGGATTCTCGGCTTTAGTTGCTGCTaGTCCTGCAGCGTTCACTTCAGGATCAGTCTGCGAAGAGGGCAA +
Preference number: 5 (lower is better)
Translates to: LVACVSAGILGFSCC*SCSVHFRISLRRGQ
Trigger: TTGCCCTCTTCGCAGACTGATCCTGAAGTGAACGCTGCAGGAGCAGCAGCAACTAAAGCCGAGAATCCCTGCACTGACACAGGCGACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS GCA 90 bp TGTCTTGTCGCCTGTGTCAGTGCAGGGATTCTCGGCTTTAGTTGCTaGTGCTCCTGCAGCGTTCACTTCAGGATCAGTCTGCGAAGAGGG +
Preference number: 5 (lower is better)
Translates to: CLVACVSAGILGFSC*CSCSVHFRISLRRG
Trigger: CCCTCTTCGCAGACTGATCCTGAAGTGAACGCTGCAGGAGCAGCAGCAACTAAAGCCGAGAATCCCTGCACTGACACAGGCGACAAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS GCA 90 bp ACCATCCGGTTTCTGATCTGCCAGTGTGTTGGTCTGAGTCCCCGATaGAGATCAGTACCTGGGCCCCTCTATTCCTTCCTTCTCCATTGG +
Preference number: 5 (lower is better)
Translates to: TIRFLICQCVGLSPR*RSVPGPLYSFLLHW
Trigger: CCAATGGAGAAGGAAGGAATAGAGGGGCCCAGGTACTGATCTGCATCGGGGACTCAGACCAACACACTGGCAGATCAGAAACCGGATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp GAGCTCCAGAAAATAACATTTTGGGCTCACAGAAACTTCTTGCTACCTCACCTCAAGCAGCGGGTTTGGTaGCAGCGGCGGCGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: ELQKITFWAHRNFLLPHLKQRVW*QRRRRP
Trigger: TGGCCTCCGCCGCCGCTGCAACCAAACCCGCTGCTT...GAGGTGAGGTAGCAAGAAGTTTCTGTGAGCCCAAAATGTTATTTTCTGGAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS TCA 90 bp TTCCGCAACTCCTCCAGATCGCAGTGGTGCTTCTTCACTTTCAGATaGTCCATGCGCTTGTGCACGGTCGTCCTCGGGATGTTTTTCAGC +
Preference number: 5 (lower is better)
Translates to: FRNSSRSQWCFFTFR*SMRLCTVVLGMFFS
Trigger: GCTGAAAAACATCCCGAGGACGACCGTGCACAAGCGCATGGATCATCTGAAAGTGAAGAAGCACCACTGCGATCTGGAGGAGTTGCGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS GCA 90 bp CAATGTCTTGTCGCCTGTGTCAGTGCAGGGATTCTCGGCTTTAGTTaGTGCTGCTCCTGCAGCGTTCACTTCAGGATCAGTCTGCGAAGA +
Preference number: 5 (lower is better)
Translates to: QCLVACVSAGILGFS*CCSCSVHFRISLRR
Trigger: TCTTCGCAGACTGATCCTGAAGTGAACGCTGCAGGAGCAGCAGCAACTAAAGCCGAGAATCCCTGCACTGACACAGGCGACAAGACATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CCA 90 bp TTAAGGGAAAATGTGCAGAATAGCCTGGTATTTCCCTTACAGGAGTaGGGAAGGAGACCGGCTGGGAGCTCCAAAGTTAAACCCGCCCCG +
Preference number: 5 (lower is better)
Translates to: LRENVQNSLVFPLQE*GRRPAGSSKVKPAP
Trigger: CGGGGCGGGTTTAACTTTGGAGCTCCCAGCCGGTCTCCTTCCCCACTCCTGTAAGGGAAATACCAGGCTATTCTGCACATTTTCCCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449193.7
ENST00000633225.1
CDS-3UTR CAA 90 bp TGCAGTAGAAACTCTCCTGCTCTATACACAGGATGGTCTGAAAACACAAGTTTTCCGACCCGCCTGCGCTaGGTCTTGAGGACGCGCTCG +
Preference number: 5 (lower is better)
Translates to: CSRNSPALYTGWSENTSFPTRLR*VLRTRS
Trigger: CGAGCGCGTCCTCAAGACCAAGCGCAGGCGGGTCGG...AAAACTTGTGTTTTCAGACCATCCTGTGTATAGAGCAGGAGAGTTTCTACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp GTCACTTGCAGTAGAAACTCTCCTGCTCTATACACAGGATGGTCTGAAAACACATGCACGCTGGGAGGCTaGCAGAAGCTGGTGCGCCTG +
Preference number: 5 (lower is better)
Translates to: VTCSRNSPALYTGWSENTCTLGG*QKLVRL
Trigger: CAGGCGCACCAGCTTCTGCAAGCCTCCCAGCGTGCA...TGTGTTTTCAGACCATCCTGTGTATAGAGCAGGAGAGTTTCTACTGCAAGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp GAAACAGTAAAGTGTTCCAGCTCTACCGTAATAACTGAGTTTTACTTGAGTCTTGCGAGCAGGCAGTCCTaGGCGCCGCCGCGCTTGCGC +
Preference number: 5 (lower is better)
Translates to: ETVKCSSSTVITEFYLSLASRQS*APPRLR
Trigger: GCGCAAGCGCGGCGGCGCCAAGGACTGCCTGCTCGC...AAGACTCAAGTAAAACTCAGTTATTACGGTAGAGCTGGAACACTTTACTGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS CCA 90 bp AATCCTCTTCTGGTTCTGTTCCCCTGGCTTCAGCCCAAATCCTTCTaGGAGCACTGGAGCCAATCACTGTCTTTCACTGCTGCAGCTACT +
Preference number: 5 (lower is better)
Translates to: NPLLVLFPWLQPKSF*EHWSQSLSFTAAAT
Trigger: AGTAGCTGCAGCAGTGAAAGACAGTGATTGGCTCCAGTGCTCCCAGAAGGATTTGGGCTGAAGCCAGGGGAACAGAACCAGAAGAGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449193.7
ENST00000487107.1
ENST00000633225.1
CDS-3UTR CAA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCCGACCCGCCTGCGCTaGGTCTTGAGGACGCGCTCG +
Preference number: 5 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVPTRLR*VLRTRS
Trigger: CGAGCGCGTCCTCAAGACCAAGCGCAGGCGGGTCGG...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CAA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCGCCGCCGCCGGGTGTTaGCTGCACAGCAGGCTCCGA +
Preference number: 5 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFAAAGC*LHSRLR
Trigger: TCGGAGCCTGCTGTGCAGCAAACACCCGGCGGCGGC...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444772.3
CDS-3UTR CAA 90 bp AATTTTGATTTACTGCTTCCATCATCACAACACAGTACACCAGCATGGCCCTTAGCGGCTGCCGGGTGTTaGCTGCACAGCAGGCTCCGA +
Preference number: 5 (lower is better)
Translates to: NFDLLLPSSQHSTPAWPLAAAGC*LHSRLR
Trigger: TCGGAGCCTGCTGTGCAGCAAACACCCGGCAGCCGC...TAAGGGCCATGCTGGTGTACTGTGTTGTGATGATGGAAGCAGTAAATCAAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS CCA 90 bp CAAGGGTCCTCCCAGTCGCATTACCACGATCCCAAGGCGGCTCCTTaGCTGCTTTGCAAAATTCGGCAAAATCTTCTTAACTGTTCAGTG +
Preference number: 5 (lower is better)
Translates to: QGSSQSHYHDPKAAP*LLCKIRQNLLNCSV
Trigger: CACTGAACAGTTAAGAAGATTTTGCCGAATTTTGCAAAGCAGCCAAGGAGCCGCCTTGGGATCGTGGTAATGCGACTGGGAGGACCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449193.7
ENST00000633225.1
CDS CCA 90 bp GATCTGCCAGTGTGTTGGTCTGAGTCCCCGATGCAGATCAGTACCTaGGCCCCTCTATTCCTTCCTTCTCCATTGGAGCACTATGATAAT +
Preference number: 5 (lower is better)
Translates to: DLPVCWSESPMQIST*APLFLPSPLEHYDN
Trigger: ATTATCATAGTGCTCCAATGGAGAAGGAAGGAATAGAGGGGCCCAGGTACTGATCTGCATCGGGGACTCAGACCAACACACTGGCAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTAAGCAGCGGGTTTGGTaGCAGCGGCGGCGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVKQRVW*QRRRRP
Trigger: TGGCCTCCGCCGCCGCTGCAACCAAACCCGCTGCTT...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS GCA 90 bp GGTCCTCCCAGTCGCATTACCACGATCCCAAGGCGGCTCCTTGGCTaGTTTGCAAAATTCGGCAAAATCTTCTTAACTGTTCAGTGTTTG +
Preference number: 5 (lower is better)
Translates to: GPPSRITTIPRRLLG*FAKFGKIFLTVQCL
Trigger: CAAACACTGAACAGTTAAGAAGATTTTGCCGAATTTTGCAAAGCAGCCAAGGAGCCGCCTTGGGATCGTGGTAATGCGACTGGGAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449193.7
ENST00000633225.1
CDS-3UTR CAA 90 bp AGGCAGCTTTTACTAGCATTTAATCAGGACTCACACCCCAATCTTTCCACTAAACGCCTGCGCTTGGTCTaGAGGACGCGCTCGGTTTTG +
Preference number: 5 (lower is better)
Translates to: RQLLLAFNQDSHPNLSTKRLRLV*RTRSVL
Trigger: CAAAACCGAGCGCGTCCTCAAGACCAAGCGCAGGCG...TTTAGTGGAAAGATTGGGGTGTGAGTCCTGATTAAATGCTAGTAAAAGCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTTGCACGCTGGGAGGCTaGCAGAAGCTGGTGCGCCTG +
Preference number: 5 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVCTLGG*QKLVRL
Trigger: CAGGCGCACCAGCTTCTGCAAGCCTCCCAGCGTGCA...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CAA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCTCGAAAGCAGCGGGTTaGGTTGCAGCGGCGGCGGAG +
Preference number: 5 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFSKAAG*VAAAAE
Trigger: CTCCGCCGCCGCTGCAACCAAACCCGCTGCTTTCGA...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CAA 90 bp AGAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTTCGAAAGCAGCGGGTTaGGTTGCAGCGGCGGCGGAG +
Preference number: 5 (lower is better)
Translates to: RVMFRPQDKQDNSKSHLISKAAG*VAAAAE
Trigger: CTCCGCCGCCGCTGCAACCAAACCCGCTGCTTTCGA...AATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS GCA 90 bp CTGTTCACCACAGGTCAGAATTCCAGGGAGCAGATTGCTTCCTTCTaGAGCAAAGAAAAGAAACTGTCAAACGCCCAAGGTGCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: LFTTGQNSREQIASF*SKEKKLSNAQGASR
Trigger: TCTGGAAGCACCTTGGGCGTTTGACAGTTTCTTTTCTTTGCTGCAGAAGGAAGCAATCTGCTCCCTGGAATTCTGACCTGTGGTGAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449193.7
ENST00000633225.1
CDS-3UTR CAA 90 bp AGGCAGCTTTTACTAGCATTTAATCAGGACTCACACCCCAATCTTTCCACTAAAGAGATGAGCGTGCATTaGGCGGCGTGGAAGGCGATG +
Preference number: 5 (lower is better)
Translates to: RQLLLAFNQDSHPNLSTKEMSVH*AAWKAM
Trigger: CATCGCCTTCCACGCCGCCAAATGCACGCTCATCTC...TTTAGTGGAAAGATTGGGGTGTGAGTCCTGATTAAATGCTAGTAAAAGCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCGCCTGCGCTTGGTCTaGAGGACGCGCTCGGTTTTG +
Preference number: 5 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVRLRLV*RTRSVL
Trigger: CAAAACCGAGCGCGTCCTCAAGACCAAGCGCAGGCG...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CAA 90 bp AAGAGTTCGGCCATGAAATATTCTGCTATTACGAGAAATATTTCAGCCCGGGCAAGATGGTACAAGAAGTaGGCCTGCGCCTGCACGCTG +
Preference number: 5 (lower is better)
Translates to: KSSAMKYSAITRNISARARWYKK*ACACTL
Trigger: CAGCGTGCAGGCGCAGGCCAACTTCTTGTACCATCT...TGCCCGGGCTGAAATATTTCTCGTAATAGCAGAATATTTCATGGCCGAACTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp GAGCTCCAGAAAATAACATTTTGGGCTCACAGAAACTTCTTGCTACCTCACCTCGCTTTGACACTACTCTaGAGGTCGGGAAGTCTGCCG +
Preference number: 5 (lower is better)
Translates to: ELQKITFWAHRNFLLPHLALTLL*RSGSLP
Trigger: CGGCAGACTTCCCGACCTCAAGAGTAGTGTCAAAGC...GAGGTGAGGTAGCAAGAAGTTTCTGTGAGCCCAAAATGTTATTTTCTGGAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS GCA 90 bp TCCCAGTCGCATTACCACGATCCCAAGGCGGCTCCTTGGCTGCTTTaGAAAATTCGGCAAAATCTTCTTAACTGTTCAGTGTTTGCAACT +
Preference number: 5 (lower is better)
Translates to: SQSHYHDPKAAPWLL*KIRQNLLNCSVFAT
Trigger: AGTTGCAAACACTGAACAGTTAAGAAGATTTTGCCGAATTTTGCAAAGCAGCCAAGGAGCCGCCTTGGGATCGTGGTAATGCGACTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449193.7
ENST00000633225.1
CDS-3UTR CAA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTGAGATGAGCGTGCATTaGGCGGCGTGGAAGGCGATG +
Preference number: 5 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVEMSVH*AAWKAM
Trigger: CATCGCCTTCCACGCCGCCAAATGCACGCTCATCTC...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CAA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCGCCGGCGACTCCGCTTaGACACTACTCTTGAGGTCG +
Preference number: 5 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFAGDSA*TLLLRS
Trigger: CGACCTCAAGAGTAGTGTCAAAGCGGAGTCGCCGGC...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CAA 90 bp GAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTTGCCGGCGACTCCGCTTaGACACTACTCTTGAGGTCG +
Preference number: 5 (lower is better)
Translates to: ESCSDHKISRTIVRVTLFAGDSA*TLLLRS
Trigger: CGACCTCAAGAGTAGTGTCAAAGCGGAGTCGCCGGC...AAATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTTACACCGGAGATGCTTaGGGGGCCCAGCTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVYTGDA*GAQLCR
Trigger: TCTGCAGAGCTGGGCCCCCAAAGCATCTCCGGTGTA...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS TCA 90 bp GCTGCTATTCCCGCCGCTGCTTTAGCTACAAATAAAATGACAGAGTaGAGTGAGCTCGTCCGGAGACACCTTCATCAATTAATTCCCCTA +
Preference number: 5 (lower is better)
Translates to: AAIPAAALATNKMTE*SELVRRHLHQLIPL
Trigger: TAGGGGAATTAATTGATGAAGGTGTCTCCGGACGAGCTCACTTCACTCTGTCATTTTATTTGTAGCTAAAGCAGCGGCGGGAATAGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp AGGCAGCTTTTACTAGCATTTAATCAGGACTCACACCCCAATCTTTCCACTAAACAGGCCCCGCCAAAGTaGGTGCTTGTCCTTCCAAAA +
Preference number: 5 (lower is better)
Translates to: RQLLLAFNQDSHPNLSTKQAPPK*VLVLPK
Trigger: TTTTGGAAGGACAAGCACCAACTTTGGCGGGGCCTG...TTTAGTGGAAAGATTGGGGTGTGAGTCCTGATTAAATGCTAGTAAAAGCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCAGATGGTACAAGAAGTaGGCCTGCGCCTGCACGCTG +
Preference number: 5 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFRWYKK*ACACTL
Trigger: CAGCGTGCAGGCGCAGGCCAACTTCTTGTACCATCT...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CAA 90 bp GAAACAGTAAAGTGTTCCAGCTCTACCGTAATAACTGAGTTTTACTTGAGTCTTTACACCGGAGATGCTTaGGGGGCCCAGCTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: ETVKCSSSTVITEFYLSLYTGDA*GAQLCR
Trigger: TCTGCAGAGCTGGGCCCCCAAAGCATCTCCGGTGTA...AAGACTCAAGTAAAACTCAGTTATTACGGTAGAGCTGGAACACTTTACTGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS TCA 90 bp TCCTTCATTTGTCTCAGTTTTACCTGTAGGACGAGGGCTTCTAGCTaGTTTCAAATTTGGTTTGACTGGAGGTGTCTGAAGGACAGGTCG +
Preference number: 5 (lower is better)
Translates to: SFICLSFTCRTRASS*FQIWFDWRCLKDRS
Trigger: CGACCTGTCCTTCAGACACCTCCAGTCAAACCAAATTTGAAATCAGCTAGAAGCCCTCGTCCTACAGGTAAAACTGAGACAAATGAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CCA 90 bp AGGAAGGAGTTTCTTTTTCAGGGCATGCAAAACCTTCCTTGGCTGTaGTTAACAAGGCGTCCTCCTCTTTACTCTCAGTCACACTGTAAA +
Preference number: 5 (lower is better)
Translates to: RKEFLFQGMQNLPWL*LTRRPPLYSQSHCK
Trigger: TTTACAGTGTGACTGAGAGTAAAGAGGAGGACGCCTTGTTAACCACAGCCAAGGAAGGTTTTGCATGCCCTGAAAAAGAAACTCCTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CCA 90 bp CCGGAGACACCTTCATCAATTAATTCCCCTAAAGCCAGCGCTGATTaGACACTCCTGACAGGTGATGCAATAAAAATTGATATTCCACCC +
Preference number: 5 (lower is better)
Translates to: PETPSSINSPKASAD*TLLTGDAIKIDIPP
Trigger: GGGTGGAATATCAATTTTTATTGCATCACCTGTCAGGAGTGTCCAATCAGCGCTGGCTTTAGGGGAATTAATTGATGAAGGTGTCTCCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCAGGCCCCGCCAAAGTaGGTGCTTGTCCTTCCAAAA +
Preference number: 5 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVQAPPK*VLVLPK
Trigger: TTTTGGAAGGACAAGCACCAACTTTGGCGGGGCCTG...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CAA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCGCTTTGACACTACTCTaGAGGTCGGGAAGTCTGCCG +
Preference number: 5 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFALTLL*RSGSLP
Trigger: CGGCAGACTTCCCGACCTCAAGAGTAGTGTCAAAGC...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS TCA 90 bp ACCTCTTCAAAACCTGACTTCAGGTCTCCCATCTCGGGCACTAAATaGTCCCCACCATTTGCAGTAAATATATACGTGACGCATACATAC +
Preference number: 5 (lower is better)
Translates to: TSSKPDFRSPISGTK*SPPFAVNIYVTHTY
Trigger: GTATGTATGCGTCACGTATATATTTACTGCAAATGGTGGGGATCATTTAGTGCCCGAGATGGGAGACCTGAAGTCAGGTTTTGAAGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS GCA 90 bp CACCAAATTTATATTCCCCATCCTCAGGTTTTGGAGAACCTAAAGTaGATGAAAGGCCCTGACTTTGAGCCAGTGGATTTAAGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: HQIYIPHPQVLENLK*MKGPDFEPVDLRKE
Trigger: CTCCTTCCTTAAATCCACTGGCTCAAAGTCAGGGCCTTTCATGCACTTTAGGTTCTCCAAAACCTGAGGATGGGGAATATAAATTTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CAA 90 bp AGGCAGCTTTTACTAGCATTTAATCAGGACTCACACCCCAATCTTTCCACTAAACCCCATCCTCAGGTTTaGGAGAACCTAAAGTGCATG +
Preference number: 5 (lower is better)
Translates to: RQLLLAFNQDSHPNLSTKPHPQV*ENLKCM
Trigger: CATGCACTTTAGGTTCTCCAAAACCTGAGGATGGGG...TTTAGTGGAAAGATTGGGGTGTGAGTCCTGATTAAATGCTAGTAAAAGCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp TGCAGTAGAAACTCTCCTGCTCTATACACAGGATGGTCTGAAAACACAAGTTTTATTCCAGGGAGCAGATaGCTTCCTTCTGCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: CSRNSPALYTGWSENTSFIPGSR*LPSAAK
Trigger: CTTTGCTGCAGAAGGAAGCAATCTGCTCCCTGGAAT...AAAACTTGTGTTTTCAGACCATCCTGTGTATAGAGCAGGAGAGTTTCTACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTAGAAATGGCAATGTCTaGTCGCCTGTGTCAGTGCAG +
Preference number: 5 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVRNGNV*SPVSVQ
Trigger: CTGCACTGACACAGGCGACAAGACATTGCCATTTCT...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CAA 90 bp GAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTTAGAAATGGCAATGTCTaGTCGCCTGTGTCAGTGCAG +
Preference number: 5 (lower is better)
Translates to: ESCSDHKISRTIVRVTLFRNGNV*SPVSVQ
Trigger: CTGCACTGACACAGGCGACAAGACATTGCCATTTCT...AAATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp GAGCTCCAGAAAATAACATTTTGGGCTCACAGAAACTTCTTGCTACCTCACCTCTGTAAAACTCACCCTTaGTATCATTGCACTCGCACT +
Preference number: 5 (lower is better)
Translates to: ELQKITFWAHRNFLLPHLCKTHP*YHCTRT
Trigger: AGTGCGAGTGCAATGATACAAAGGGTGAGTTTTACA...GAGGTGAGGTAGCAAGAAGTTTCTGTGAGCCCAAAATGTTATTTTCTGGAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCATGCAAAACCTTCCTaGGCTGTGGTTAACAAGGCG +
Preference number: 5 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVHAKPS*AVVNKA
Trigger: CGCCTTGTTAACCACAGCCAAGGAAGGTTTTGCATG...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CAA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCCCCCATCCTCAGGTTTaGGAGAACCTAAAGTGCATG +
Preference number: 5 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFPHPQV*ENLKCM
Trigger: CATGCACTTTAGGTTCTCCAAAACCTGAGGATGGGG...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CAA 90 bp TGCAGTAGAAACTCTCCTGCTCTATACACAGGATGGTCTGAAAACACAAGTTTTGGCCTTGTGAGGAGTTaGAGAATCCTTAGTGGTGTT +
Preference number: 5 (lower is better)
Translates to: CSRNSPALYTGWSENTSFGLVRS*RILSGV
Trigger: AACACCACTAAGGATTCTCAAACTCCTCACAAGGCC...AAAACTTGTGTTTTCAGACCATCCTGTGTATAGAGCAGGAGAGTTTCTACTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp AGGCAGCTTTTACTAGCATTTAATCAGGACTCACACCCCAATCTTTCCACTAAAGGCTCCTTGGCTGCTTaGCAAAATTCGGCAAAATCT +
Preference number: 5 (lower is better)
Translates to: RQLLLAFNQDSHPNLSTKGSLAA*QNSAKS
Trigger: AGATTTTGCCGAATTTTGCAAAGCAGCCAAGGAGCC...TTTAGTGGAAAGATTGGGGTGTGAGTCCTGATTAAATGCTAGTAAAAGCTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp GAAACAGTAAAGTGTTCCAGCTCTACCGTAATAACTGAGTTTTACTTGAGTCTTATTAACCGTACTGGATaGGAGGCGGGATCGTCCAAG +
Preference number: 5 (lower is better)
Translates to: ETVKCSSSTVITEFYLSLINRTG*EAGSSK
Trigger: CTTGGACGATCCCGCCTCCAATCCAGTACGGTTAAT...AAGACTCAAGTAAAACTCAGTTATTACGGTAGAGCTGGAACACTTTACTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp AATAACATTTTGGGCTCACAGAAACTTCTTGCTACCTCACCTCACCTCACTGTGAGTGCGGACTTACGTTaGGAATTTCTCTCGATTTTC +
Preference number: 5 (lower is better)
Translates to: NNILGSQKLLATSPHLTVSADLR*EFLSIF
Trigger: GAAAATCGAGAGAAATTCCAAACGTAAGTCCGCACT...CACAGTGAGGTGAGGTGAGGTAGCAAGAAGTTTCTGTGAGCCCAAAATGTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS TCA 90 bp CTCCCAATAATGAGTGATGGTGGACAAGGAAAATTTGCCATGAAATaGAATGGCCTTTTCACTGCTGATGCTACATTGCTGGCTACCTTT +
Preference number: 5 (lower is better)
Translates to: LPIMSDGGQGKFAMK*NGLFTADATLLATF
Trigger: AAAGGTAGCCAGCAATGTAGCATCAGCAGTGAAAAGGCCATTTCATTTCATGGCAAATTTTCCTTGTCCACCATCACTCATTATTGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CAA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCAGATCTGTGAAGACTaGGGAGAGGGCAAACATTTG +
Preference number: 5 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVQICED*GEGKHL
Trigger: CAAATGTTTGCCCTCTCCCAAGTCTTCACAGATCTG...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CAA 90 bp AGAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTCAGATCTGTGAAGACTaGGGAGAGGGCAAACATTTG +
Preference number: 5 (lower is better)
Translates to: RVMFRPQDKQDNSKSHLIQICED*GEGKHL
Trigger: CAAATGTTTGCCCTCTCCCAAGTCTTCACAGATCTG...AATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTATGCTGTTAATTGCCTaGAGTTTCCGCAACTCCTCC +
Preference number: 5 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVMLLIA*SFRNSS
Trigger: GGAGGAGTTGCGGAAACTCAAGGCAATTAACAGCAT...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CAA 90 bp ATCCGATTTCTGTCTTCAAAATGCGATAAACCAGGACTCCAAAGGGGGTGTAACTTGCTGGCTACCTTTTaGCGTCTGTTTATAACTGTA +
Preference number: 5 (lower is better)
Translates to: IRFLSSKCDKPGLQRGCNLLATF*RLFITV
Trigger: TACAGTTATAAACAGACGCAAAAAGGTAGCCAGCAA...GTTACACCCCCTTTGGAGTCCTGGTTTATCGCATTTTGAAGACAGAAATCGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCGGCCTTGTGAGGAGTTaGAGAATCCTTAGTGGTGTT +
Preference number: 5 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFGLVRS*RILSGV
Trigger: AACACCACTAAGGATTCTCAAACTCCTCACAAGGCC...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CAA 90 bp ATCCGATTTCTGTCTTCAAAATGCGATAAACCAGGACTCCAAAGGGGGTGTAACAACACATTAATGGACTaGTACAAACCATCCTGTGCA +
Preference number: 5 (lower is better)
Translates to: IRFLSSKCDKPGLQRGCNNTLMD*YKPSCA
Trigger: TGCACAGGATGGTTTGTACAAGTCCATTAATGTGTT...GTTACACCCCCTTTGGAGTCCTGGTTTATCGCATTTTGAAGACAGAAATCGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp GAAACAGTAAAGTGTTCCAGCTCTACCGTAATAACTGAGTTTTACTTGAGTCTTGCTCACAGAAACTTCTaGCTACCTCACCTCACCTCA +
Preference number: 5 (lower is better)
Translates to: ETVKCSSSTVITEFYLSLAHRNF*LPHLTS
Trigger: TGAGGTGAGGTGAGGTAGCAAGAAGTTTCTGTGAGC...AAGACTCAAGTAAAACTCAGTTATTACGGTAGAGCTGGAACACTTTACTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS CCA 90 bp ATTAGCACTACTGTCTTCTACTTTGATTTTAATATTGTGCAGAAATaGCAATGTCTTGTCGCCTGTGTCAGTGCAGGGATTCTCGGCTTT +
Preference number: 5 (lower is better)
Translates to: ISTTVFYFDFNIVQK*QCLVACVSAGILGF
Trigger: AAAGCCGAGAATCCCTGCACTGACACAGGCGACAAGACATTGCCATTTCTGCACAATATTAAAATCAAAGTAGAAGACAGTAGTGCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CAA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCGGAGAGGGCAAACATTaGCTTCCCTTTAATGATGAG +
Preference number: 5 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFGEGKH*LPFNDE
Trigger: CTCATCATTAAAGGGAAGCAAATGTTTGCCCTCTCC...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CAA 90 bp AGAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTGGAGAGGGCAAACATTaGCTTCCCTTTAATGATGAG +
Preference number: 5 (lower is better)
Translates to: RVMFRPQDKQDNSKSHLIGEGKH*LPFNDE
Trigger: CTCATCATTAAAGGGAAGCAAATGTTTGCCCTCTCC...AATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp GTCACTTGCAGTAGAAACTCTCCTGCTCTATACACAGGATGGTCTGAAAACACATCGGAGTATTCTTTGTaGTGGAAATGCATTGTTTGT +
Preference number: 5 (lower is better)
Translates to: VTCSRNSPALYTGWSENTSEYSL*WKCIVC
Trigger: ACAAACAATGCATTTCCACAACAAAGAATACTCCGA...TGTGTTTTCAGACCATCCTGTGTATAGAGCAGGAGAGTTTCTACTGCAAGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp AGGCAGCTTTTACTAGCATTTAATCAGGACTCACACCCCAATCTTTCCACTAAATCACCCTTTGTATCATaGCACTCGCACTTTAGCTTA +
Preference number: 5 (lower is better)
Translates to: RQLLLAFNQDSHPNLSTKSPFVS*HSHFSL
Trigger: TAAGCTAAAGTGCGAGTGCAATGATACAAAGGGTGA...TTTAGTGGAAAGATTGGGGTGTGAGTCCTGATTAAATGCTAGTAAAAGCTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp AGGCAGCTTTTACTAGCATTTAATCAGGACTCACACCCCAATCTTTCCACTAAAAGCCAGGGGGTTTCTTaGATAAATTTGTTGACCATG +
Preference number: 5 (lower is better)
Translates to: RQLLLAFNQDSHPNLSTKSQGVS*INLLTM
Trigger: CATGGTCAACAAATTTATCAAAGAAACCCCCTGGCT...TTTAGTGGAAAGATTGGGGTGTGAGTCCTGATTAAATGCTAGTAAAAGCTGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp GAGCTCCAGAAAATAACATTTTGGGCTCACAGAAACTTCTTGCTACCTCACCTCTGGTTTGTGATGCTTTaGGTTGGTAGTTTAGGTAAA +
Preference number: 5 (lower is better)
Translates to: ELQKITFWAHRNFLLPHLWFVML*VGSLGK
Trigger: TTTACCTAAACTACCAACCAAAAGCATCACAAACCA...GAGGTGAGGTAGCAAGAAGTTTCTGTGAGCCCAAAATGTTATTTTCTGGAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp AGGCAGCTTTTACTAGCATTTAATCAGGACTCACACCCCAATCTTTCCACTAAATTCCTTCCTTCTCCATaGGAGCACTATGATAATGGA +
Preference number: 5 (lower is better)
Translates to: RQLLLAFNQDSHPNLSTKFLPSP*EHYDNG
Trigger: TCCATTATCATAGTGCTCCAATGGAGAAGGAAGGAA...TTTAGTGGAAAGATTGGGGTGTGAGTCCTGATTAAATGCTAGTAAAAGCTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp GAGCTCCAGAAAATAACATTTTGGGCTCACAGAAACTTCTTGCTACCTCACCTCCCAGAAAATAACATTTaGGGCTCACAGAAACTTCTT +
Preference number: 5 (lower is better)
Translates to: ELQKITFWAHRNFLLPHLPENNI*GSQKLL
Trigger: AAGAAGTTTCTGTGAGCCCAAAATGTTATTTTCTGG...GAGGTGAGGTAGCAAGAAGTTTCTGTGAGCCCAAAATGTTATTTTCTGGAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp GAGCTCCAGAAAATAACATTTTGGGCTCACAGAAACTTCTTGCTACCTCACCTCGTTGTATTTACTGATTaGTCACTATCAAGAGTTCGG +
Preference number: 5 (lower is better)
Translates to: ELQKITFWAHRNFLLPHLVVFTD*SLSRVR
Trigger: CCGAACTCTTGATAGTGACAAATCAGTAAATACAAC...GAGGTGAGGTAGCAAGAAGTTTCTGTGAGCCCAAAATGTTATTTTCTGGAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp GAGCTCCAGAAAATAACATTTTGGGCTCACAGAAACTTCTTGCTACCTCACCTCACTGTTATTTTTCATTaGGGGTATTGCAACTCTGAC +
Preference number: 5 (lower is better)
Translates to: ELQKITFWAHRNFLLPHLTVIFH*GYCNSD
Trigger: GTCAGAGTTGCAATACCCCAAATGAAAAATAACAGT...GAGGTGAGGTAGCAAGAAGTTTCTGTGAGCCCAAAATGTTATTTTCTGGAGCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTTGTTGTGGAAATGCATaGTTTGTCTTTGGGCTAGGT +
Preference number: 5 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVCCGNA*FVFGLG
Trigger: ACCTAGCCCAAAGACAAACAATGCATTTCCACAACA...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CAA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCCTAGCAGCTATTGTGTaGTTATCTGCACAGTGTGTA +
Preference number: 5 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFLAAIV*LSAQCV
Trigger: TACACACTGTGCAGATAACAACACAATAGCTGCTAG...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CAA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTTCACCCTTTGTATCATaGCACTCGCACTTTAGCTTA +
Preference number: 5 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVSPFVS*HSHFSL
Trigger: TAAGCTAAAGTGCGAGTGCAATGATACAAAGGGTGA...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CAA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTTGTAAAACTCACCCTTaGTATCATTGCACTCGCACT +
Preference number: 5 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVCKTHP*YHCTRT
Trigger: AGTGCGAGTGCAATGATACAAAGGGTGAGTTTTACA...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CAA 90 bp AAGAGTTCGGCCATGAAATATTCTGCTATTACGAGAAATATTTCAGCCCGGGCAGTTTCTTTGATAAATTaGTTGACCATGTCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: KSSAMKYSAITRNISARAVSLIN*LTMSAD
Trigger: GTCAGCTGACATGGTCAACAAATTTATCAAAGAAAC...TGCCCGGGCTGAAATATTTCTCGTAATAGCAGAATATTTCATGGCCGAACTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp AATTTTGATTTACTGCTTCCATCATCACAACACAGTACACCAGCATGGCCCTTAAGGATATCCAAAATATaGCCAAATGAGAGCAAGGGT +
Preference number: 5 (lower is better)
Translates to: NFDLLLPSSQHSTPAWPLRISKI*PNESKG
Trigger: ACCCTTGCTCTCATTTGGCAATATTTTGGATATCCT...TAAGGGCCATGCTGGTGTACTGTGTTGTGATGATGGAAGCAGTAAATCAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp GAGTCATGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTTTTTGTAGCAGTTGAATaGAGGTACCGGGTGCATTAT +
Preference number: 5 (lower is better)
Translates to: ESCSDHKISRTIVRVTLFFVAVE*RYRVHY
Trigger: ATAATGCACCCGGTACCTCAATTCAACTGCTACAAA...AAATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACATGACTC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp TGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTTAAAACCTGTTGTGGAAATGCATaGTTTGTCTTTGGGCTAGGT +
Preference number: 5 (lower is better)
Translates to: CSDHKISRTIVRVTLFKTCCGNA*FVFGLG
Trigger: ACCTAGCCCAAAGACAAACAATGCATTTCCACAACA...GGTTTTAAATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCCTCTCGGAGTATTCTTaGTTGTGGAAATGCATTGTT +
Preference number: 5 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFLSEYS*LWKCIV
Trigger: AACAATGCATTTCCACAACAAAGAATACTCCGAGAG...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CAA 90 bp TGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTTAAAACCCTAGCAGCTATTGTGTaGTTATCTGCACAGTGTGTA +
Preference number: 5 (lower is better)
Translates to: CSDHKISRTIVRVTLFKTLAAIV*LSAQCV
Trigger: TACACACTGTGCAGATAACAACACAATAGCTGCTAG...GGTTTTAAATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTTTGCTGGCTACCTTTTaGCGTCTGTTTATAACTGTA +
Preference number: 5 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVLLATF*RLFITV
Trigger: TACAGTTATAAACAGACGCAAAAAGGTAGCCAGCAA...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CAA 90 bp AATTTTGATTTACTGCTTCCATCATCACAACACAGTACACCAGCATGGCCCTTATCTTTGATAAATTTGTaGACCATGTCAGCTGACTCT +
Preference number: 5 (lower is better)
Translates to: NFDLLLPSSQHSTPAWPLSLINL*TMSADS
Trigger: AGAGTCAGCTGACATGGTCAACAAATTTATCAAAGA...TAAGGGCCATGCTGGTGTACTGTGTTGTGATGATGGAAGCAGTAAATCAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCAACAGACTTTTCCTGTaGCAAAGGAGTGGCTTTAAA +
Preference number: 5 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFNRLFL*QRSGFK
Trigger: TTTAAAGCCACTCCTTTGCAACAGGAAAAGTCTGTT...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCAATTGTTTTGGGAGTTaGAAGAGTCATGTTCAGACC +
Preference number: 5 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFNCFGS*KSHVQT
Trigger: GGTCTGAACATGACTCTTCAAACTCCCAAAACAATT...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp GACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCTCGGAGTATTCTTTGTaGTGGAAATGCATTGTTTGT +
Preference number: 5 (lower is better)
Translates to: DLYKPSCAVYNKRKVIWFSEYSL*WKCIVC
Trigger: ACAAACAATGCATTTCCACAACAAAGAATACTCCGA...GAACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS-3UTR CAA 90 bp TGTTCAGACCACAAGATAAGCAGGACAATAGTAAGAGTCACCTTATTTAAAACCCTCTCGGAGTATTCTTaGTTGTGGAAATGCATTGTT +
Preference number: 5 (lower is better)
Translates to: CSDHKISRTIVRVTLFKTLSEYS*LWKCIV
Trigger: AACAATGCATTTCCACAACAAAGAATACTCCGAGAG...GGTTTTAAATAAGGTGACTCTTACTATTGTCCTGCTTATCTTGTGGTCTGAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS-3UTR CAA 90 bp GGACTTGTACAAACCATCCTGTGCAGTTTACAACAAAAGGAAGGTAATATGGTTCCTTATTTAAAACCTTaGGGTGAGAACACAAAACAG +
Preference number: 5 (lower is better)
Translates to: GLVQTILCSLQQKEGNMVPYLKP*GENTKQ
Trigger: CTGTTTTGTGTTCTCACCCAAAGGTTTTAAATAAGG...AACCATATTACCTTCCTTTTGTTGTAAACTGCACAGGATGGTTTGTACAAGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS CCA 72 bp CCGCCGCTGCCGCCGCCGCCGCCGCCGCCGCCGCCTTaGCTTTGTAGGACCTGGGCAACAGCAGCAGGCGCC +
Preference number: 6 (lower is better)
Translates to: PPLPPPPPPPPP*LCRTWATAAGA
Trigger: GGCGCCTGCTGCTGTTGCCCAGGTCCTACAAAGCCAAGGCGGCGGCGGCGGCGGCGGCGGCGGCAGCGGCGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS CCA 72 bp CCGCCGCCGCCGCCGCCGCCTTGGCTTTGTAGGACCTaGGCAACAGCAGCAGGCGCCGCGCGCCGGCGTGAG +
Preference number: 6 (lower is better)
Translates to: PPPPPPPWLCRT*ATAAGAARRRE
Trigger: CTCACGCCGGCGCGCGGCGCCTGCTGCTGTTGCCCAGGTCCTACAAAGCCAAGGCGGCGGCGGCGGCGGCGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS GCA 72 bp CGAGCAGGCAGTCCTTGGCGCCGCCGCGCTTGCGCTTaGAGCGGTAGCTCAGGCTCCCCGGGCCTCCGGCGC +
Preference number: 6 (lower is better)
Translates to: RAGSPWRRRACA*SGSSGSPGLRR
Trigger: GCGCCGGAGGCCCGGGGAGCCTGAGCTACCGCTGCAAGCGCAAGCGCGGCGGCGCCAAGGACTGCCTGCTCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS CCA 72 bp GCCGCGCGCCGGCGTGAGGCGCGAGCAGGCAGTCCTTaGCGCCGCCGCGCTTGCGCTTGCAGCGGTAGCTCA +
Preference number: 6 (lower is better)
Translates to: AARRREARAGSP*RRRACACSGSS
Trigger: TGAGCTACCGCTGCAAGCGCAAGCGCGGCGGCGCCAAGGACTGCCTGCTCGCGCCTCACGCCGGCGCGCGGC
76% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS GCA 72 bp GGCGGCAGCAGCGGCGGCGGCGGCGGCGGCGGCGGCTaGCGGGTGTTTGCTGCACAGCAGGCTCCGAAAATA +
Preference number: 6 (lower is better)
Translates to: GGSSGGGGGGGG*RVFAAQQAPKI
Trigger: TATTTTCGGAGCCTGCTGTGCAGCAAACACCCGGCAGCCGCCGCCGCCGCCGCCGCCGCCGCTGCTGCCGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS GCA 72 bp GAGGCGCGAGCAGGCAGTCCTTGGCGCCGCCGCGCTTaGGCTTGCAGCGGTAGCTCAGGCTCCCCGGGCCTC +
Preference number: 6 (lower is better)
Translates to: EARAGSPWRRRA*ACSGSSGSPGL
Trigger: GAGGCCCGGGGAGCCTGAGCTACCGCTGCAAGCGCAAGCGCGGCGGCGCCAAGGACTGCCTGCTCGCGCCTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS GCA 72 bp ACTGCGATTGGCCCGCCTCATCCCGCGCCCTCTCTCTaGTCGCAGCGGCCCCAGCCCTTCCGCGGCGTCGCG +
Preference number: 6 (lower is better)
Translates to: TAIGPPHPAPSL*SQRPQPFRGVA
Trigger: CGCGACGCCGCGGAAGGGCTGGGGCCGCTGCGAGCAGAGAGAGGGCGCGGGATGAGGCGGGCCAATCGCAGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633225.1
CDS TCA 72 bp TGCGGCGGCTGGGCCCGGTGGTGGTGGTGGTGGTGGTaGTGGTGGTGGTGGTGGTGGTGGTGCGGAGGCGGG +
Preference number: 6 (lower is better)
Translates to: CGGWARWWWWWW*WWWWWWWCGGG
Trigger: CCCGCCTCCGCACCACCACCACCACCACCACCATCACCACCACCACCACCACCACCGGGCCCAGCCGCCGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS GCA 72 bp CCGCCGCCGCCGCCGCCGCCGCCGCCGGGTGTTTGCTaGACAGCAGGCTCCGAAAATAAGCAGGGTCCGAGG +
Preference number: 6 (lower is better)
Translates to: PPPPPPPPPGVC*TAGSENKQGPR
Trigger: CCTCGGACCCTGCTTATTTTCGGAGCCTGCTGTGCAGCAAACACCCGGCGGCGGCGGCGGCGGCGGCGGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444772.3
CDS GCA 72 bp CTGCCGCCGCCGCCGCCGCCGCCGCCGCCGGGTGTTTaGTGCACAGCAGGCTCCGAAAATAAGCAGGGTCCG +
Preference number: 6 (lower is better)
Translates to: LPPPPPPPPPGV*CTAGSENKQGP
Trigger: CGGACCCTGCTTATTTTCGGAGCCTGCTGTGCAGCAAACACCCGGCGGCGGCGGCGGCGGCGGCGGCGGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444772.3
CDS GCA 72 bp CGGCGGCGGCGGCGGCGGCGGCGGCTGCCGGGTGTTTaGTGCACAGCAGGCTCCGAAAATAAGCAGGGTCCG +
Preference number: 6 (lower is better)
Translates to: RRRRRRRRLPGV*CTAGSENKQGP
Trigger: CGGACCCTGCTTATTTTCGGAGCCTGCTGTGCAGCAAACACCCGGCAGCCGCCGCCGCCGCCGCCGCCGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS GCA 72 bp CGGCGGCGGCGGCGGCGGCGGCTGCCGGGTGTTTGCTaGACAGCAGGCTCCGAAAATAAGCAGGGTCCGAGG +
Preference number: 6 (lower is better)
Translates to: RRRRRRRLPGVC*TAGSENKQGPR
Trigger: CCTCGGACCCTGCTTATTTTCGGAGCCTGCTGTGCAGCAAACACCCGGCAGCCGCCGCCGCCGCCGCCGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS TCA 72 bp TGGCCAGGGCCCGGCCGACCCGCCTGCGCTTGGTCTTaGGGACGCGCTCGGTTTTGCAGGAGGTGTAGAGCG +
Preference number: 6 (lower is better)
Translates to: WPGPGRPACAWS*GRARFCRRCRA
Trigger: CGCTCTACACCTCCTGCAAAACCGAGCGCGTCCTCAAGACCAAGCGCAGGCGGGTCGGCCGGGCCCTGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS GCA 72 bp TGGACTCGGAGTCGCTGCTGCAGCTCTCGGGAAAGCTaGCCAGATGGGGCTGCGGCCGGTGGTGGTGAGGGG +
Preference number: 6 (lower is better)
Translates to: WTRSRCCSSRES*PDGAAAGGGEG
Trigger: CCCCTCACCACCACCGGCCGCAGCCCCATCTGGGCAGCTTTCCCGAGAGCTGCAGCAGCGACTCCGAGTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CCA 72 bp TCCCCAGGCTGGCCGGGCAGTACACCGGAGATGCTTTaGGGGCCCAGCTCTGCAGATTCCACTCCGCCGGCG +
Preference number: 6 (lower is better)
Translates to: SPGWPGSTPEML*GPSSADSTPPA
Trigger: CGCCGGCGGAGTGGAATCTGCAGAGCTGGGCCCCCAAAGCATCTCCGGTGTACTGCCCGGCCAGCCTGGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CAA 72 bp GCCTTTGTGGCCAGGGCCCGGCCGACCCGCCTGCGCTaGGTCTTGAGGACGCGCTCGGTTTTGCAGGAGGTG +
Preference number: 6 (lower is better)
Translates to: AFVARARPTRLR*VLRTRSVLQEV
Trigger: CACCTCCTGCAAAACCGAGCGCGTCCTCAAGACCAAGCGCAGGCGGGTCGGCCGGGCCCTGGCCACAAAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS GCA 72 bp CGTGGTCCGAGTAGGAGCTGGACTCGGAGTCGCTGCTaGAGCTCTCGGGAAAGCTGCCCAGATGGGGCTGCG +
Preference number: 6 (lower is better)
Translates to: RGPSRSWTRSRC*SSRESCPDGAA
Trigger: CGCAGCCCCATCTGGGCAGCTTTCCCGAGAGCTGCAGCAGCGACTCCGAGTCCAGCTCCTACTCGGACCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS GCA 72 bp GCGGCGGCGGAGGCCAGATGGTACAAGAAGTTGGCCTaGGCCTGCACGCTGGGAGGCTTGCAGAAGCTGGTG +
Preference number: 6 (lower is better)
Translates to: AAAEARWYKKLA*ACTLGGLQKLV
Trigger: CACCAGCTTCTGCAAGCCTCCCAGCGTGCAGGCGCAGGCCAACTTCTTGTACCATCTGGCCTCCGCCGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CCA 72 bp GCAGCGGGTTTGGTTGCAGCGGCGGCGGAGGCCAGATaGTACAAGAAGTTGGCCTGCGCCTGCACGCTGGGA +
Preference number: 6 (lower is better)
Translates to: AAGLVAAAAEAR*YKKLACACTLG
Trigger: TCCCAGCGTGCAGGCGCAGGCCAACTTCTTGTACCATCTGGCCTCCGCCGCCGCTGCAACCAAACCCGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS GCA 72 bp GCGGAGGCCAGATGGTACAAGAAGTTGGCCTGCGCCTaGACGCTGGGAGGCTTGCAGAAGCTGGTGCGCCTG +
Preference number: 6 (lower is better)
Translates to: AEARWYKKLACA*TLGGLQKLVRL
Trigger: CAGGCGCACCAGCTTCTGCAAGCCTCCCAGCGTGCAGGCGCAGGCCAACTTCTTGTACCATCTGGCCTCCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS GCA 72 bp ACAACTCCCCAGGCTGGCCGGGCAGTACACCGGAGATaGTTTGGGGGCCCAGCTCTGCAGATTCCACTCCGC +
Preference number: 6 (lower is better)
Translates to: TTPQAGRAVHRR*FGGPALQIPLR
Trigger: GCGGAGTGGAATCTGCAGAGCTGGGCCCCCAAAGCATCTCCGGTGTACTGCCCGGCCAGCCTGGGGAGTTGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CCA 72 bp GGATGCTCTGCACTGACACTTGGCTGGAGCCGGAGCTaGAGTCCGACTCGGTGGACGAGTCCTCCTCCTCCG +
Preference number: 6 (lower is better)
Translates to: GCSALTLGWSRS*SPTRWTSPPPP
Trigger: CGGAGGAGGAGGACTCGTCCACCGAGTCGGACTCCAGCTCCGGCTCCAGCCAAGTGTCAGTGCAGAGCATCC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CCA 72 bp AATCCGAGTCGTTGGCCGCGTGGTCCGAGTAGGAGCTaGACTCGGAGTCGCTGCTGCAGCTCTCGGGAAAGC +
Preference number: 6 (lower is better)
Translates to: NPSRWPRGPSRS*TRSRCCSSRES
Trigger: GCTTTCCCGAGAGCTGCAGCAGCGACTCCGAGTCCAGCTCCTACTCGGACCACGCGGCCAACGACTCGGATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CCA 72 bp CGGGAAGTCTGCCGGCATCCTCGAAAGCAGCGGGTTTaGTTGCAGCGGCGGCGGAGGCCAGATGGTACAAGA +
Preference number: 6 (lower is better)
Translates to: REVCRHPRKQRV*LQRRRRPDGTR
Trigger: TCTTGTACCATCTGGCCTCCGCCGCCGCTGCAACCAAACCCGCTGCTTTCGAGGATGCCGGCAGACTTCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CCA 72 bp CACTGCTGCAGCTACTGGGAACCTGTTGACTGCGATTaGCCCGCCTCATCCCGCGCCCTCTCTCTGCTCGCA +
Preference number: 6 (lower is better)
Translates to: HCCSYWEPVDCD*PASSRALSLLA
Trigger: TGCGAGCAGAGAGAGGGCGCGGGATGAGGCGGGCCAATCGCAGTCAACAGGTTCCCAGTAGCTGCAGCAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633225.1
CDS CAA 72 bp TCGGGAAGTCTGCCGGCATCCTCGAAAGCAGCGGGTTaGGTTGCAGCGGCGGCGGAGGCCAGATGGTACAAG +
Preference number: 6 (lower is better)
Translates to: SGSLPASSKAAG*VAAAAEARWYK
Trigger: CTTGTACCATCTGGCCTCCGCCGCCGCTGCAACCAAACCCGCTGCTTTCGAGGATGCCGGCAGACTTCCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CAA 90 bp CTCTTGAGGTCGGGAAGTCTGCCGGCATCCTCGAAAGCAGCGGGTTaGGTTGCAGCGGCGGCGGAGGCCAGATGGTACAAGAAGTTGGCC +
Preference number: 6 (lower is better)
Translates to: LLRSGSLPASSKAAG*VAAAAEARWYKKLA
Trigger: GGCCAACTTCTTGTACCATCTGGCCTCCGCCGCCGCTGCAACCAAACCCGCTGCTTTCGAGGATGCCGGCAGACTTCCCGACCTCAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS TCA 72 bp GCAGAAGCTGGTGCGCCTGAATCGGATGCTCTGCACTaGCACTTGGCTGGAGCCGGAGCTGGAGTCCGACTC +
Preference number: 6 (lower is better)
Translates to: AEAGAPESDALH*HLAGAGAGVRL
Trigger: GAGTCGGACTCCAGCTCCGGCTCCAGCCAAGTGTCAGTGCAGAGCATCCGATTCAGGCGCACCAGCTTCTGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS TCA 72 bp CCTGCACGCTGGGAGGCTTGCAGAAGCTGGTGCGCCTaGATCGGATGCTCTGCACTGACACTTGGCTGGAGC +
Preference number: 6 (lower is better)
Translates to: PARWEACRSWCA*IGCSALTLGWS
Trigger: GCTCCAGCCAAGTGTCAGTGCAGAGCATCCGATTCAGGCGCACCAGCTTCTGCAAGCCTCCCAGCGTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS GCA 72 bp CCTGGAGCGGGGCAGTTTCATAGTTTAGAGGGGGTTTaGACGGCGAGCGCACGATCTCCGGGTAGTGCGAGC +
Preference number: 6 (lower is better)
Translates to: PGAGQFHSLEGV*TASARSPGSAS
Trigger: GCTCGCACTACCCGGAGATCGTGCGCTCGCCGTGCAAACCCCCTCTAAACTATGAAACTGCCCCGCTCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS GCA 72 bp GGCTTGCAGAAGCTGGTGCGCCTGAATCGGATGCTCTaGACTGACACTTGGCTGGAGCCGGAGCTGGAGTCC +
Preference number: 6 (lower is better)
Translates to: GLQKLVRLNRML*TDTWLEPELES
Trigger: GGACTCCAGCTCCGGCTCCAGCCAAGTGTCAGTGCAGAGCATCCGATTCAGGCGCACCAGCTTCTGCAAGCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CAA 90 bp TTGGGGGCCCAGCTCTGCAGATTCCACTCCGCCGGCGACTCCGCTTaGACACTACTCTTGAGGTCGGGAAGTCTGCCGGCATCCTCGAAA +
Preference number: 6 (lower is better)
Translates to: LGAQLCRFHSAGDSA*TLLLRSGSLPASSK
Trigger: TTTCGAGGATGCCGGCAGACTTCCCGACCTCAAGAGTAGTGTCAAAGCGGAGTCGCCGGCGGAGTGGAATCTGCAGAGCTGGGCCCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS TCA 72 bp AGGAGGTGTAGAGCGCTTCCACGTCTTCCCGGGAGATaGGCGTGCATTTGGCGGCGTGGAAGGCGATGCTGT +
Preference number: 6 (lower is better)
Translates to: RRCRALPRLPGR*ACIWRRGRRCC
Trigger: ACAGCATCGCCTTCCACGCCGCCAAATGCACGCTCATCTCCCGGGAAGACGTGGAAGCGCTCTACACCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CAA 72 bp CAGCTCTGCAGATTCCACTCCGCCGGCGACTCCGCTTaGACACTACTCTTGAGGTCGGGAAGTCTGCCGGCA +
Preference number: 6 (lower is better)
Translates to: QLCRFHSAGDSA*TLLLRSGSLPA
Trigger: TGCCGGCAGACTTCCCGACCTCAAGAGTAGTGTCAAAGCGGAGTCGCCGGCGGAGTGGAATCTGCAGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CAA 90 bp CTCTGCAGATTCCACTCCGCCGGCGACTCCGCTTTGACACTACTCTaGAGGTCGGGAAGTCTGCCGGCATCCTCGAAAGCAGCGGGTTTG +
Preference number: 6 (lower is better)
Translates to: LCRFHSAGDSALTLL*RSGSLPASSKAAGL
Trigger: CAAACCCGCTGCTTTCGAGGATGCCGGCAGACTTCCCGACCTCAAGAGTAGTGTCAAAGCGGAGTCGCCGGCGGAGTGGAATCTGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS GCA 72 bp AAGTCTGCCGGCATCCTCGAAAGCAGCGGGTTTGGTTaGAGCGGCGGCGGAGGCCAGATGGTACAAGAAGTT +
Preference number: 6 (lower is better)
Translates to: KSAGILESSGFG*SGGGGQMVQEV
Trigger: AACTTCTTGTACCATCTGGCCTCCGCCGCCGCTGCAACCAAACCCGCTGCTTTCGAGGATGCCGGCAGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CCA 72 bp TGGAGCTGGACAAACTGGAGCCAAAATCCGAGTCGTTaGCCGCGTGGTCCGAGTAGGAGCTGGACTCGGAGT +
Preference number: 6 (lower is better)
Translates to: WSWTNWSQNPSR*PRGPSRSWTRS
Trigger: ACTCCGAGTCCAGCTCCTACTCGGACCACGCGGCCAACGACTCGGATTTTGGCTCCAGTTTGTCCAGCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CCA 72 bp TATCGTTCCTTATCTCAGCGAAACAACTCCCCAGGCTaGCCGGGCAGTACACCGGAGATGCTTTGGGGGCCC +
Preference number: 6 (lower is better)
Translates to: YRSLSQRNNSPG*PGSTPEMLWGP
Trigger: GGGCCCCCAAAGCATCTCCGGTGTACTGCCCGGCCAGCCTGGGGAGTTGTTTCGCTGAGATAAGGAACGATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CAA 72 bp TTCCACTCCGCCGGCGACTCCGCTTTGACACTACTCTaGAGGTCGGGAAGTCTGCCGGCATCCTCGAAAGCA +
Preference number: 6 (lower is better)
Translates to: FHSAGDSALTLL*RSGSLPASSKA
Trigger: TGCTTTCGAGGATGCCGGCAGACTTCCCGACCTCAAGAGTAGTGTCAAAGCGGAGTCGCCGGCGGAGTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CAA 72 bp AGCGCTTCCACGTCTTCCCGGGAGATGAGCGTGCATTaGGCGGCGTGGAAGGCGATGCTGTTAATTGCCTTG +
Preference number: 6 (lower is better)
Translates to: SASTSSREMSVH*AAWKAMLLIAL
Trigger: CAAGGCAATTAACAGCATCGCCTTCCACGCCGCCAAATGCACGCTCATCTCCCGGGAAGACGTGGAAGCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CAA 90 bp TCCTCCTCCTCTCCCTCCTCCTCCTCTTCCTCTGAGGACACAGAATaGCTGGAGCTGGACAAACTGGAGCCAAAATCCGAGTCGTTGGCC +
Preference number: 6 (lower is better)
Translates to: SSSSPSSSSSSEDTE*LELDKLEPKSESLA
Trigger: GGCCAACGACTCGGATTTTGGCTCCAGTTTGTCCAGCTCCAGCAATTCTGTGTCCTCAGAGGAAGAGGAGGAGGAGGGAGAGGAGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CAA 90 bp TACTGGATTGGAGGCGGGATCGTCCAAGAGTCCCCAGCAAAGCCTTaGCCAGGGTCCTGTTCACCACAGGTCAGAATTCCAGGGAGCAGA +
Preference number: 6 (lower is better)
Translates to: YWIGGGIVQESPAKP*PGSCSPQVRIPGSR
Trigger: TCTGCTCCCTGGAATTCTGACCTGTGGTGAACAGGACCCTGGCAAAGGCTTTGCTGGGGACTCTTGGACGATCCCGCCTCCAATCCAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449193.7
ENST00000633225.1
CDS TCA 72 bp AGACCGGCTGGGAGCTCCAAAGTTAAACCCGCCCCGTaGACCACCCCAGTGCGGACTTACGTTTGGAATTTC +
Preference number: 6 (lower is better)
Translates to: RPAGSSKVKPAP*TTPVRTYVWNF
Trigger: GAAATTCCAAACGTAAGTCCGCACTGGGGTGGTTCACGGGGCGGGTTTAACTTTGGAGCTCCCAGCCGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449193.7
ENST00000633225.1
CDS GCA 72 bp CTGGGAGCACTGGAGCCAATCACTGTCTTTCACTGCTaGAGCTACTGGGAACCTGTTGACTGCGATTGGCCC +
Preference number: 6 (lower is better)
Translates to: LGALEPITVFHC*SYWEPVDCDWP
Trigger: GGGCCAATCGCAGTCAACAGGTTCCCAGTAGCTGCAGCAGTGAAAGACAGTGATTGGCTCCAGTGCTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633225.1
CDS CCA 72 bp ACGTCTTCCCGGGAGATGAGCGTGCATTTGGCGGCGTaGAAGGCGATGCTGTTAATTGCCTTGAGTTTCCGC +
Preference number: 6 (lower is better)
Translates to: TSSREMSVHLAA*KAMLLIALSFR
Trigger: GCGGAAACTCAAGGCAATTAACAGCATCGCCTTCCACGCCGCCAAATGCACGCTCATCTCCCGGGAAGACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS TCA 72 bp TCCTCCAGATCGCAGTGGTGCTTCTTCACTTTCAGATaGTCCATGCGCTTGTGCACGGTCGTCCTCGGGATG +
Preference number: 6 (lower is better)
Translates to: SSRSQWCFFTFR*SMRLCTVVLGM
Trigger: CATCCCGAGGACGACCGTGCACAAGCGCATGGATCATCTGAAAGTGAAGAAGCACCACTGCGATCTGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS TCA 72 bp GCTGACTCTATGGGCTGCTCAGCCATACTGAAATCCTaGGCCACCACGAGGGGAGAGAGGAGAGACAAGACA +
Preference number: 6 (lower is better)
Translates to: ADSMGCSAILKS*ATTRGERRDKT
Trigger: TGTCTTGTCTCTCCTCTCTCCCCTCGTGGTGGCTCAGGATTTCAGTATGGCTGAGCAGCCCATAGAGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449193.7
ENST00000487107.1
ENST00000633225.1
CDS GCA 72 bp AGTGCAGGGATTCTCGGCTTTAGTTGCTGCTGCTCCTaGAGCGTTCACTTCAGGATCAGTCTGCGAAGAGGG +
Preference number: 6 (lower is better)
Translates to: SAGILGFSCCCS*SVHFRISLRRG
Trigger: CCCTCTTCGCAGACTGATCCTGAAGTGAACGCTGCAGGAGCAGCAGCAACTAAAGCCGAGAATCCCTGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS GCA 72 bp GCCTGTGTCAGTGCAGGGATTCTCGGCTTTAGTTGCTaGTGCTCCTGCAGCGTTCACTTCAGGATCAGTCTG +
Preference number: 6 (lower is better)
Translates to: ACVSAGILGFSC*CSCSVHFRISL
Trigger: CAGACTGATCCTGAAGTGAACGCTGCAGGAGCAGCAGCAACTAAAGCCGAGAATCCCTGCACTGACACAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS GCA 72 bp GTCGCCTGTGTCAGTGCAGGGATTCTCGGCTTTAGTTaGTGCTGCTCCTGCAGCGTTCACTTCAGGATCAGT +
Preference number: 6 (lower is better)
Translates to: VACVSAGILGFS*CCSCSVHFRIS
Trigger: ACTGATCCTGAAGTGAACGCTGCAGGAGCAGCAGCAACTAAAGCCGAGAATCCCTGCACTGACACAGGCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CAA 72 bp CATTTGGCGGCGTGGAAGGCGATGCTGTTAATTGCCTaGAGTTTCCGCAACTCCTCCAGATCGCAGTGGTGC +
Preference number: 6 (lower is better)
Translates to: HLAAWKAMLLIA*SFRNSSRSQWC
Trigger: GCACCACTGCGATCTGGAGGAGTTGCGGAAACTCAAGGCAATTAACAGCATCGCCTTCCACGCCGCCAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS GCA 72 bp TGTGTCAGTGCAGGGATTCTCGGCTTTAGTTGCTGCTaGTCCTGCAGCGTTCACTTCAGGATCAGTCTGCGA +
Preference number: 6 (lower is better)
Translates to: CVSAGILGFSCC*SCSVHFRISLR
Trigger: TCGCAGACTGATCCTGAAGTGAACGCTGCAGGAGCAGCAGCAACTAAAGCCGAGAATCCCTGCACTGACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS GCA 72 bp CTTCTGGGAGCACTGGAGCCAATCACTGTCTTTCACTaGTGCAGCTACTGGGAACCTGTTGACTGCGATTGG +
Preference number: 6 (lower is better)
Translates to: LLGALEPITVFH*CSYWEPVDCDW
Trigger: CCAATCGCAGTCAACAGGTTCCCAGTAGCTGCAGCAGTGAAAGACAGTGATTGGCTCCAGTGCTCCCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633225.1
CDS CAA 90 bp ATGAGCGTGCATTTGGCGGCGTGGAAGGCGATGCTGTTAATTGCCTaGAGTTTCCGCAACTCCTCCAGATCGCAGTGGTGCTTCTTCACT +
Preference number: 6 (lower is better)
Translates to: MSVHLAAWKAMLLIA*SFRNSSRSQWCFFT
Trigger: AGTGAAGAAGCACCACTGCGATCTGGAGGAGTTGCGGAAACTCAAGGCAATTAACAGCATCGCCTTCCACGCCGCCAAATGCACGCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS GCA 72 bp GCTGCTGCTCCTGCAGCGTTCACTTCAGGATCAGTCTaGGAAGAGGGCAAATCCGTAGCAAATTCAGGACAA +
Preference number: 6 (lower is better)
Translates to: AAAPAAFTSGSV*EEGKSVANSGQ
Trigger: TTGTCCTGAATTTGCTACGGATTTGCCCTCTTCGCAGACTGATCCTGAAGTGAACGCTGCAGGAGCAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS GCA 72 bp TTTCTGATCTGCCAGTGTGTTGGTCTGAGTCCCCGATaGAGATCAGTACCTGGGCCCCTCTATTCCTTCCTT +
Preference number: 6 (lower is better)
Translates to: FLICQCVGLSPR*RSVPGPLYSFL
Trigger: AAGGAAGGAATAGAGGGGCCCAGGTACTGATCTGCATCGGGGACTCAGACCAACACACTGGCAGATCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS CAA 90 bp AGGCATTTCCTAGCCTCTCGGAGTATTCTTTGTTGTGGAAATGCATaGTTTGTCTTTGGGCTAGGTGAAGAGGCCCCCTCTGCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: RHFLASRSILCCGNA*FVFGLGEEAPSARQ
Trigger: CTGCCTGGCAGAGGGGGCCTCTTCACCTAGCCCAAAGACAAACAATGCATTTCCACAACAAAGAATACTCCGAGAGGCTAGGAAATGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CAA 90 bp TTGCCAGGGTCCTGTTCACCACAGGTCAGAATTCCAGGGAGCAGATaGCTTCCTTCTGCAGCAAAGAAAAGAAACTGTCAAACGCCCAAG +
Preference number: 6 (lower is better)
Translates to: LPGSCSPQVRIPGSR*LPSAAKKRNCQTPK
Trigger: CTTGGGCGTTTGACAGTTTCTTTTCTTTGCTGCAGAAGGAAGCAATCTGCTCCCTGGAATTCTGACCTGTGGTGAACAGGACCCTGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449193.7
ENST00000633225.1
CDS CCA 72 bp TCCCAGTCGCATTACCACGATCCCAAGGCGGCTCCTTaGCTGCTTTGCAAAATTCGGCAAAATCTTCTTAAC +
Preference number: 6 (lower is better)
Translates to: SQSHYHDPKAAP*LLCKIRQNLLN
Trigger: GTTAAGAAGATTTTGCCGAATTTTGCAAAGCAGCCAAGGAGCCGCCTTGGGATCGTGGTAATGCGACTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449193.7
ENST00000633225.1
CDS CAA 90 bp ATAAGCCAGAAATGTGTACACTTTTCCACAATTAACCGTACTGGATaGGAGGCGGGATCGTCCAAGAGTCCCCAGCAAAGCCTTTGCCAG +
Preference number: 6 (lower is better)
Translates to: ISQKCVHFSTINRTG*EAGSSKSPQQSLCQ
Trigger: CTGGCAAAGGCTTTGCTGGGGACTCTTGGACGATCCCGCCTCCAATCCAGTACGGTTAATTGTGGAAAAGTGTACACATTTCTGGCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449193.7
ENST00000633225.1
CDS TCA 72 bp CTAGCTGATTTCAAATTTGGTTTGACTGGAGGTGTCTaGAGGACAGGTCGCTTTCCCAGTACTAGTGTCCGG +
Preference number: 6 (lower is better)
Translates to: LADFKFGLTGGV*RTGRFPSTSVR
Trigger: CCGGACACTAGTACTGGGAAAGCGACCTGTCCTTCAGACACCTCCAGTCAAACCAAATTTGAAATCAGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CAA 72 bp AAATGTGTACACTTTTCCACAATTAACCGTACTGGATaGGAGGCGGGATCGTCCAAGAGTCCCCAGCAAAGC +
Preference number: 6 (lower is better)
Translates to: KCVHFSTINRTG*EAGSSKSPQQS
Trigger: GCTTTGCTGGGGACTCTTGGACGATCCCGCCTCCAATCCAGTACGGTTAATTGTGGAAAAGTGTACACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449193.7
ENST00000633225.1
CDS GCA 72 bp CATTACCACGATCCCAAGGCGGCTCCTTGGCTGCTTTaGAAAATTCGGCAAAATCTTCTTAACTGTTCAGTG +
Preference number: 6 (lower is better)
Translates to: HYHDPKAAPWLL*KIRQNLLNCSV
Trigger: CACTGAACAGTTAAGAAGATTTTGCCGAATTTTGCAAAGCAGCCAAGGAGCCGCCTTGGGATCGTGGTAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449193.7
ENST00000633225.1
CDS GCA 72 bp AGTCGCATTACCACGATCCCAAGGCGGCTCCTTGGCTaGTTTGCAAAATTCGGCAAAATCTTCTTAACTGTT +
Preference number: 6 (lower is better)
Translates to: SRITTIPRRLLG*FAKFGKIFLTV
Trigger: AACAGTTAAGAAGATTTTGCCGAATTTTGCAAAGCAGCCAAGGAGCCGCCTTGGGATCGTGGTAATGCGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449193.7
ENST00000633225.1
CDS CAA 72 bp GAAGGAGTTTCTTTTTCAGGGCATGCAAAACCTTCCTaGGCTGTGGTTAACAAGGCGTCCTCCTCTTTACTC +
Preference number: 6 (lower is better)
Translates to: EGVSFSGHAKPS*AVVNKASSSLL
Trigger: GAGTAAAGAGGAGGACGCCTTGTTAACCACAGCCAAGGAAGGTTTTGCATGCCCTGAAAAAGAAACTCCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CAA 90 bp GGATTTAAGGAAGGAGTTTCTTTTTCAGGGCATGCAAAACCTTCCTaGGCTGTGGTTAACAAGGCGTCCTCCTCTTTACTCTCAGTCACA +
Preference number: 6 (lower is better)
Translates to: GFKEGVSFSGHAKPS*AVVNKASSSLLSVT
Trigger: TGTGACTGAGAGTAAAGAGGAGGACGCCTTGTTAACCACAGCCAAGGAAGGTTTTGCATGCCCTGAAAAAGAAACTCCTTCCTTAAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CAA 90 bp TTTTTCTCACCCTGGCACCAAATTTATATTCCCCATCCTCAGGTTTaGGAGAACCTAAAGTGCATGAAAGGCCCTGACTTTGAGCCAGTG +
Preference number: 6 (lower is better)
Translates to: FFSPWHQIYIPHPQV*ENLKCMKGPDFEPV
Trigger: CACTGGCTCAAAGTCAGGGCCTTTCATGCACTTTAGGTTCTCCAAAACCTGAGGATGGGGAATATAAATTTGGTGCCAGGGTGAGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS TCA 72 bp AAACCTGACTTCAGGTCTCCCATCTCGGGCACTAAATaGTCCCCACCATTTGCAGTAAATATATACGTGACG +
Preference number: 6 (lower is better)
Translates to: KPDFRSPISGTK*SPPFAVNIYVT
Trigger: CGTCACGTATATATTTACTGCAAATGGTGGGGATCATTTAGTGCCCGAGATGGGAGACCTGAAGTCAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CAA 72 bp CCCTGGCACCAAATTTATATTCCCCATCCTCAGGTTTaGGAGAACCTAAAGTGCATGAAAGGCCCTGACTTT +
Preference number: 6 (lower is better)
Translates to: PWHQIYIPHPQV*ENLKCMKGPDF
Trigger: AAAGTCAGGGCCTTTCATGCACTTTAGGTTCTCCAAAACCTGAGGATGGGGAATATAAATTTGGTGCCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CAA 72 bp TTCTTCAAAAGCCAGGGGGTTTCTTTGATAAATTTGTaGACCATGTCAGCTGACTCTATGGGCTGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: FFKSQGVSLINL*TMSADSMGCSA
Trigger: GGCTGAGCAGCCCATAGAGTCAGCTGACATGGTCAACAAATTTATCAAAGAAACCCCCTGGCTTTTGAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000449193.7
ENST00000487107.1
ENST00000633225.1
CDS CAA 90 bp CCCTCTGCCAGGCAGTTAATTGTCAGGTCAGTTCTCTTTACAGCATaGGAAATTTCAGAGTGTGGGAATGTAATCTCAGATACCCTATCG +
Preference number: 6 (lower is better)
Translates to: PSARQLIVRSVLFTA*EISECGNVISDTLS
Trigger: CGATAGGGTATCTGAGATTACATTCCCACACTCTGAAATTTCCAATGCTGTAAAGAGAACTGACCTGACAATTAACTGCCTGGCAGAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS TCA 72 bp TGTCTCAGTTTTACCTGTAGGACGAGGGCTTCTAGCTaGTTTCAAATTTGGTTTGACTGGAGGTGTCTGAAG +
Preference number: 6 (lower is better)
Translates to: CLSFTCRTRASS*FQIWFDWRCLK
Trigger: CTTCAGACACCTCCAGTCAAACCAAATTTGAAATCAGCTAGAAGCCCTCGTCCTACAGGTAAAACTGAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS TCA 72 bp ATCTTTCCATTAAACTATCGGAGCTCAGAAACAGCCTaGCTCACAGACTTCATCAGAAGCAGTGTGTGTACG +
Preference number: 6 (lower is better)
Translates to: IFPLNYRSSETA*LTDFIRSSVCT
Trigger: CGTACACACACTGCTTCTGATGAAGTCTGTGAGTCAGGCTGTTTCTGAGCTCCGATAGTTTAATGGAAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS CAA 72 bp CTATTCTTCAAAAGCCAGGGGGTTTCTTTGATAAATTaGTTGACCATGTCAGCTGACTCTATGGGCTGCTCA +
Preference number: 6 (lower is better)
Translates to: LFFKSQGVSLIN*LTMSADSMGCS
Trigger: TGAGCAGCCCATAGAGTCAGCTGACATGGTCAACAAATTTATCAAAGAAACCCCCTGGCTTTTGAAGAATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000449193.7
ENST00000487107.1
ENST00000633225.1
CDS CAA 72 bp GTACGATGCAGACTGTTTCAGTGGTTTGTGATGCTTTaGGTTGGTAGTTTAGGTAAATCTTCCACAACTCCC +
Preference number: 6 (lower is better)
Translates to: VRCRLFQWFVML*VGSLGKSSTTP
Trigger: GGGAGTTGTGGAAGATTTACCTAAACTACCAACCAAAAGCATCACAAACCACTGAAACAGTCTGCATCGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449193.7
ENST00000633225.1
CDS CAA 90 bp AGTGCTGATGTACGATGCAGACTGTTTCAGTGGTTTGTGATGCTTTaGGTTGGTAGTTTAGGTAAATCTTCCACAACTCCCAGTTTTTCC +
Preference number: 6 (lower is better)
Translates to: SADVRCRLFQWFVML*VGSLGKSSTTPSFS
Trigger: GGAAAAACTGGGAGTTGTGGAAGATTTACCTAAACTACCAACCAAAAGCATCACAAACCACTGAAACAGTCTGCATCGTACATCAGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449193.7
ENST00000633225.1
CDS CCA 72 bp CCTTCATCAATTAATTCCCCTAAAGCCAGCGCTGATTaGACACTCCTGACAGGTGATGCAATAAAAATTGAT +
Preference number: 6 (lower is better)
Translates to: PSSINSPKASAD*TLLTGDAIKID
Trigger: ATCAATTTTTATTGCATCACCTGTCAGGAGTGTCCAATCAGCGCTGGCTTTAGGGGAATTAATTGATGAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449193.7
CDS CAA 90 bp TATAAAGTACTATTCTTCAAAAGCCAGGGGGTTTCTTTGATAAATTaGTTGACCATGTCAGCTGACTCTATGGGCTGCTCAGCCATACTG +
Preference number: 6 (lower is better)
Translates to: YKVLFFKSQGVSLIN*LTMSADSMGCSAIL
Trigger: CAGTATGGCTGAGCAGCCCATAGAGTCAGCTGACATGGTCAACAAATTTATCAAAGAAACCCCCTGGCTTTTGAAGAATAGTACTTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000449193.7
ENST00000487107.1
ENST00000633225.1
CDS CAA 90 bp ATCCAGATGTATAAAGTACTATTCTTCAAAAGCCAGGGGGTTTCTTaGATAAATTTGTTGACCATGTCAGCTGACTCTATGGGCTGCTCA +
Preference number: 6 (lower is better)
Translates to: IQMYKVLFFKSQGVS*INLLTMSADSMGCS
Trigger: TGAGCAGCCCATAGAGTCAGCTGACATGGTCAACAAATTTATCAAAGAAACCCCCTGGCTTTTGAAGAATAGTACTTTATACATCTGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000449193.7
ENST00000487107.1
ENST00000633225.1
CDS CAA 90 bp TCTGCTCCTGAAGAATCATTATTTAAGAACCTAGCAGCTATTGTGTaGTTATCTGCACAGTGTGTAGTAGGAGTTGTTTGTAGGCATTTC +
Preference number: 6 (lower is better)
Translates to: SAPEESLFKNLAAIV*LSAQCVVGVVCRHF
Trigger: GAAATGCCTACAAACAACTCCTACTACACACTGTGCAGATAACAACACAATAGCTGCTAGGTTCTTAAATAATGATTCTTCAGGAGCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CAA 90 bp TCATATTCTTCATTAGCACTACTGTCTTCTACTTTGATTTTAATATaGTGCAGAAATGGCAATGTCTTGTCGCCTGTGTCAGTGCAGGGA +
Preference number: 6 (lower is better)
Translates to: SYSSLALLSSTLILI*CRNGNVLSPVSVQG
Trigger: TCCCTGCACTGACACAGGCGACAAGACATTGCCATTTCTGCACAATATTAAAATCAAAGTAGAAGACAGTAGTGCTAATGAAGAATATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CAA 90 bp GGCTGCTTTGCAAAATTCGGCAAAATCTTCTTAACTGTTCAGTGTTaGCAACTACAACATAAATGCAACCCAGGCATTTATGTGTTTCCT +
Preference number: 6 (lower is better)
Translates to: GCFAKFGKIFLTVQC*QLQHKCNPGIYVFP
Trigger: AGGAAACACATAAATGCCTGGGTTGCATTTATGTTGTAGTTGCAAACACTGAACAGTTAAGAAGATTTTGCCGAATTTTGCAAAGCAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449193.7
ENST00000487107.1
ENST00000633225.1
CDS CAA 72 bp GAAGAATCATTATTTAAGAACCTAGCAGCTATTGTGTaGTTATCTGCACAGTGTGTAGTAGGAGTTGTTTGT +
Preference number: 6 (lower is better)
Translates to: EESLFKNLAAIV*LSAQCVVGVVC
Trigger: ACAAACAACTCCTACTACACACTGTGCAGATAACAACACAATAGCTGCTAGGTTCTTAAATAATGATTCTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444772.3
ENST00000449193.7
CDS CAA 72 bp GCAAAATTCGGCAAAATCTTCTTAACTGTTCAGTGTTaGCAACTACAACATAAATGCAACCCAGGCATTTAT +
Preference number: 6 (lower is better)
Translates to: AKFGKIFLTVQC*QLQHKCNPGIY
Trigger: ATAAATGCCTGGGTTGCATTTATGTTGTAGTTGCAAACACTGAACAGTTAAGAAGATTTTGCCGAATTTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000449193.7
ENST00000487107.1
ENST00000633225.1