Pregenerated sensors for SKA1 (Homo sapiens)
Ensembl gene IDs: ENSG00000154839, ENSG00000262634Ensembl transcript IDs: ENST00000285116.8, ENST00000398452.6, ENST00000417656.6, ENST00000488454.5, ENST00000494518.1, ENST00000571318.5, ENST00000571751.5, ENST00000576078.2, ENST00000616604.2, ENST00000633940.1
Found 177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATAGTTAACGGATTATGTCTTGTTGACATAGGCCTGATGGATTATTaGCACAAATCTCCAGCCCCTCTCCCCTCTCTGGAGGTGGGAGAC | + |
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Preference number: 1 (lower is better) Translates to: IVNGLCLVDIGLMDY*HKSPAPLPSLEVGD Trigger: GTCTCCCACCTCCAGAGAGGGGAGAGGGGCTGGAGATTTGTGTCAATAATCCATCAGGCCTATGTCAACAAGACATAATCCGTTAACTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR GCA 90 bp | GGGACTACAGGCGCATGCCGATCTGTACCCAATCTTATTAGGGTCTaGAGCATTGTTCACTCAACACAAAAACTGGACATGAGCATTTTT | + |
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Preference number: 1 (lower is better) Translates to: GTTGACRSVPNLIRV*SIVHSTQKLDMSIF Trigger: AAAAATGCTCATGTCCAGTTTTTGTGTTGAGTGAACAATGCTGCAGACCCTAATAAGATTGGGTACAGATCGGCATGCGCCTGTAGTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR CCA 90 bp | AATGTACATTTATTACACTTTCATTACAGGTTGAAGTTTACAGACTaGTGTACACTAAATGCATTTCAGGTAAGCTGCTCCCTAAGGACC | + |
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Preference number: 1 (lower is better) Translates to: NVHLLHFHYRLKFTD*CTLNAFQVSCSLRT Trigger: GGTCCTTAGGGAGCAGCTTACCTGAAATGCATTTAGTGTACACCAGTCTGTAAACTTCAACCTGTAATGAAAGTGTAATAAATGTACATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR TCA 90 bp | AGGCTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGGAGGTGGGCGGATCATaGGGTCAGGAGATCGAGACC | + |
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Preference number: 2 (lower is better) Translates to: RLLQRIQMNNSHMKGYLGEVGGS*GQEIET Trigger: GGTCTCGATCTCCTGACCTCATGATCCGCCCACCTC...CCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR TCA 90 bp | AGGCTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGGAGCAGCCCCCATCCTaGGTTATCCAGGTGCCCATC | + |
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Preference number: 2 (lower is better) Translates to: RLLQRIQMNNSHMKGYLGEQPPS*VIQVPI Trigger: GATGGGCACCTGGATAACTCAGGATGGGGGCTGCTC...CCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR CCA 90 bp | CTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGCAAGCTGAGGCAGGAGGATaGCGTGAACCTGGGAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: LLQRIQMNNSHMKGYLGQAEAGG*REPGRQ Trigger: CTGCCTCCCAGGTTCACGCCATCCTCCTGCCTCAGC...TTGCCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR TCA 90 bp | ATTGACACAAATCTCCAGCCCCTCTCCCCTCTCTGGAGGTGGGAGACTGAAAGTAAGCAAGCCCCTGGGTaGCAAAGCAAGATCCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: IDTNLQPLSPLWRWETESKQAPG*QSKILS Trigger: AGACAGGATCTTGCTTTGTCACCCAGGGGCTTGCTT...ACTTTCAGTCTCCCACCTCCAGAGAGGGGAGAGGGGCTGGAGATTTGTGTCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR GCA 90 bp | AGGCTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGTTGCCCAGACTGGAGTaGAGTGGCACGATCTCGGCT | + |
|
Preference number: 2 (lower is better) Translates to: RLLQRIQMNNSHMKGYLGLPRLE*SGTISA Trigger: AGCCGAGATCGTGCCACTGCACTCCAGTCTGGGCAA...CCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR CCA 90 bp | CTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGCAACGCTGCAGTCCGGCCTaGGTGAAAGAGCGAGACTGT | + |
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Preference number: 2 (lower is better) Translates to: LLQRIQMNNSHMKGYLGQRCSPA*VKERDC Trigger: ACAGTCTCGCTCTTTCACCCAGGCCGGACTGCAGCG...TTGCCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR CCA 90 bp | AGGCTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGCCCCTCTCCCCTCTCTaGAGGTGGGAGACTGAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: RLLQRIQMNNSHMKGYLGPLSPL*RWETES Trigger: ACTTTCAGTCTCCCACCTCCAGAGAGGGGAGAGGGG...CCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR GCA 90 bp | ACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTATCCAGGCACTGCACTCTAGCCTaGGTGACAAAGCAAGCCCCT | + |
|
Preference number: 2 (lower is better) Translates to: TSNHDVVFVSSPHPELSRHCTLA*VTKQAP Trigger: AGGGGCTTGCTTTGTCACGCAGGCTAGAGTGCAGTG...CCTGGATAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR TCA 90 bp | AGGCTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGAAGCAAGCCCCTGGGTaGCAAAGCAAGATCCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: RLLQRIQMNNSHMKGYLGKQAPG*QSKILS Trigger: AGACAGGATCTTGCTTTGTCACCCAGGGGCTTGCTT...CCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR TCA 90 bp | AGGCTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGATGATGTGGTCTTTGTaGGCAGCCCCCATCCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: RLLQRIQMNNSHMKGYLGMMWSL*AAPILS Trigger: ACTCAGGATGGGGGCTGCTCACAAAGACCACATCAT...CCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR GCA 90 bp | CTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGCAACACTGCACTCTAGCCTaGGTGACAAAGCAAGCCCCT | + |
|
Preference number: 2 (lower is better) Translates to: LLQRIQMNNSHMKGYLGQHCTLA*VTKQAP Trigger: AGGGGCTTGCTTTGTCACGCAGGCTAGAGTGCAGTG...TTGCCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR TCA 90 bp | TTTGAAACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTAAGGTTGAGGCTGCAGTaGGCCATGTTTGCGCCACTG | + |
|
Preference number: 2 (lower is better) Translates to: FETSNHDVVFVSSPHPELRLRLQ*AMFAPL Trigger: CAGTGGCGCAAACATGGCTCACTGCAGCCTCAACCT...TAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGTTTCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR TCA 90 bp | CTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGCAAATGATGTGGTCTTTGTaGGCAGCCCCCATCCTGAGT | + |
|
Preference number: 2 (lower is better) Translates to: LLQRIQMNNSHMKGYLGQMMWSL*AAPILS Trigger: ACTCAGGATGGGGGCTGCTCACAAAGACCACATCAT...TTGCCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR CCA 90 bp | ACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTATCCAGGGACAAAGCAAGCCCCTaGGTGACAAAGCAAGATCCT | + |
|
Preference number: 2 (lower is better) Translates to: TSNHDVVFVSSPHPELSRDKASP*VTKQDP Trigger: AGGATCTTGCTTTGTCACCCAGGGGCTTGCTTTGTC...CCTGGATAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR GCA 90 bp | ATTGACACAAATCTCCAGCCCCTCTCCCCTCTCTGGAGGTGGGAGACTGAAAGTCTGGTGTACACTAAATaGATTTCAGGTAAGCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: IDTNLQPLSPLWRWETESLVYTK*ISGKLL Trigger: GAGCAGCTTACCTGAAATGCATTTAGTGTACACCAG...ACTTTCAGTCTCCCACCTCCAGAGAGGGGAGAGGGGCTGGAGATTTGTGTCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR GCA 90 bp | AGGCTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGTTCATAAAGCTGGAGTaGGTCACCTTCCTGGCACAT | + |
|
Preference number: 2 (lower is better) Translates to: RLLQRIQMNNSHMKGYLGFIKLE*VTFLAH Trigger: ATGTGCCAGGAAGGTGACGCACTCCAGCTTTATGAA...CCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR GCA 90 bp | CTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGCAAGCATTTCAGGTAAGCTaGTCCCTAAGGACCTATACG | + |
|
Preference number: 2 (lower is better) Translates to: LLQRIQMNNSHMKGYLGQAFQVS*SLRTYT Trigger: CGTATAGGTCCTTAGGGAGCAGCTTACCTGAAATGC...TTGCCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR GCA 90 bp | AGGCTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGCTGGTGTACACTAAATaGATTTCAGGTAAGCTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: RLLQRIQMNNSHMKGYLGLVYTK*ISGKLL Trigger: GAGCAGCTTACCTGAAATGCATTTAGTGTACACCAG...CCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR CCA 90 bp | TTTGAAACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTAAAAATTAGCCAGGCATaGTGGCGCACGCTTGTAGTC | + |
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Preference number: 2 (lower is better) Translates to: FETSNHDVVFVSSPHPELKISQA*WRTLVV Trigger: GACTACAAGCGTGCGCCACCATGCCTGGCTAATTTT...TAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGTTTCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR TCA 90 bp | CTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGCAACGGATTATGTCTTGTTaGCATAGGCCTGATGGATTA | + |
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Preference number: 2 (lower is better) Translates to: LLQRIQMNNSHMKGYLGQRIMSC*HRPDGL Trigger: TAATCCATCAGGCCTATGTCAACAAGACATAATCCG...TTGCCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR GCA 90 bp | TTTGAAACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTAGCATTTCAGGTAAGCTaGTCCCTAAGGACCTATACG | + |
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Preference number: 2 (lower is better) Translates to: FETSNHDVVFVSSPHPELAFQVS*SLRTYT Trigger: CGTATAGGTCCTTAGGGAGCAGCTTACCTGAAATGC...TAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGTTTCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR TCA 90 bp | AAGTTTACCTATAGACTGAAATGCCATCGATGGAATTTAGACACTAGTGATCTTAGGTTGAGGCTGCAGTaGGCCATGTTTGCGCCACTG | + |
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Preference number: 2 (lower is better) Translates to: KFTYRLKCHRWNLDTSDLRLRLQ*AMFAPL Trigger: CAGTGGCGCAAACATGGCTCACTGCAGCCTCAACCT...AAGATCACTAGTGTCTAAATTCCATCGATGGCATTTCAGTCTATAGGTAAACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR GCA 90 bp | ACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTATCCAGGTTTAGTTCCATTATGTaGCTAGTACAGAGGCGTATT | + |
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Preference number: 2 (lower is better) Translates to: TSNHDVVFVSSPHPELSRFSSIM*LVQRRI Trigger: AATACGCCTCTGTACTAGGCACATAATGGAACTAAA...CCTGGATAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR GCA 90 bp | AAGTTTACCTATAGACTGAAATGCCATCGATGGAATTTAGACACTAGTGATCTTTTGCCCAGACTGGAGTaGAGTGGCACGATCTCGGCT | + |
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Preference number: 2 (lower is better) Translates to: KFTYRLKCHRWNLDTSDLLPRLE*SGTISA Trigger: AGCCGAGATCGTGCCACTGCACTCCAGTCTGGGCAA...AAGATCACTAGTGTCTAAATTCCATCGATGGCATTTCAGTCTATAGGTAAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR CCA 90 bp | ACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTATCCAGGCTGAAATGCCATCGATaGAATTTAGACACTAGTGAT | + |
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Preference number: 2 (lower is better) Translates to: TSNHDVVFVSSPHPELSRLKCHR*NLDTSD Trigger: ATCACTAGTGTCTAAATTCCATCGATGGCATTTCAG...CCTGGATAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR TCA 90 bp | CTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGCAACTAACCTCATCAGCTTaGTCTTTTTCTTCCAATATC | + |
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Preference number: 2 (lower is better) Translates to: LLQRIQMNNSHMKGYLGQLTSSA*SFSSNI Trigger: GATATTGGAAGAAAAAGATCAAGCTGATGAGGTTAG...TTGCCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR TCA 90 bp | CTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGCAAAGTTTACCTATAGACTaGAATGCCATCGATGGAATT | + |
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Preference number: 2 (lower is better) Translates to: LLQRIQMNNSHMKGYLGQSLPID*NAIDGI Trigger: AATTCCATCGATGGCATTTCAGTCTATAGGTAAACT...TTGCCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR TCA 90 bp | CTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGCAAACTTTCATTACAGGTTaGAGTTTACAGACTGGTGTA | + |
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Preference number: 2 (lower is better) Translates to: LLQRIQMNNSHMKGYLGQTFITG*SLQTGV Trigger: TACACCAGTCTGTAAACTTCAACCTGTAATGAAAGT...TTGCCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR CCA 90 bp | ACTTTGGAAATTACAAGGGTTTTAGGAGCTCTGAACAAGGAACTAGATAGGAAGAAAATTAGCCAGGCATaGTGGCGCACGCTTGTAGTC | + |
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Preference number: 2 (lower is better) Translates to: TLEITRVLGALNKELDRKKISQA*WRTLVV Trigger: GACTACAAGCGTGCGCCACCATGCCTGGCTAATTTT...CTTCCTATCTAGTTCCTTGTTCAGAGCTCCTAAAACCCTTGTAATTTCCAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR CCA 90 bp | CTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGCAACTGAAATGCCATCGATaGAATTTAGACACTAGTGAT | + |
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Preference number: 2 (lower is better) Translates to: LLQRIQMNNSHMKGYLGQLKCHR*NLDTSD Trigger: ATCACTAGTGTCTAAATTCCATCGATGGCATTTCAG...TTGCCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR TCA 90 bp | TTTGAAACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTACTAACCTCATCAGCTTaGTCTTTTTCTTCCAATATC | + |
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Preference number: 2 (lower is better) Translates to: FETSNHDVVFVSSPHPELLTSSA*SFSSNI Trigger: GATATTGGAAGAAAAAGATCAAGCTGATGAGGTTAG...TAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGTTTCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR TCA 90 bp | ACTTTGGAAATTACAAGGGTTTTAGGAGCTCTGAACAAGGAACTAGATAGGAAGACTTTCATTACAGGTTaGAGTTTACAGACTGGTGTA | + |
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Preference number: 2 (lower is better) Translates to: TLEITRVLGALNKELDRKTFITG*SLQTGV Trigger: TACACCAGTCTGTAAACTTCAACCTGTAATGAAAGT...CTTCCTATCTAGTTCCTTGTTCAGAGCTCCTAAAACCCTTGTAATTTCCAAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR GCA 90 bp | ACTTTGGAAATTACAAGGGTTTTAGGAGCTCTGAACAAGGAACTAGATAGGAAGTTTAGTTCCATTATGTaGCTAGTACAGAGGCGTATT | + |
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Preference number: 2 (lower is better) Translates to: TLEITRVLGALNKELDRKFSSIM*LVQRRI Trigger: AATACGCCTCTGTACTAGGCACATAATGGAACTAAA...CTTCCTATCTAGTTCCTTGTTCAGAGCTCCTAAAACCCTTGTAATTTCCAAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR GCA 90 bp | ACTTTGGAAATTACAAGGGTTTTAGGAGCTCTGAACAAGGAACTAGATAGGAAGACCTATAGACTGAAATaGCATCGATGGAATTTAGAC | + |
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Preference number: 2 (lower is better) Translates to: TLEITRVLGALNKELDRKTYRLK*HRWNLD Trigger: GTCTAAATTCCATCGATGGCATTTCAGTCTATAGGT...CTTCCTATCTAGTTCCTTGTTCAGAGCTCCTAAAACCCTTGTAATTTCCAAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR GCA 90 bp | AAGTTTACCTATAGACTGAAATGCCATCGATGGAATTTAGACACTAGTGATCTTAATCTTATTAGGGTCTaGAGCATTGTTCACTCAACA | + |
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Preference number: 2 (lower is better) Translates to: KFTYRLKCHRWNLDTSDLNLIRV*SIVHST Trigger: TGTTGAGTGAACAATGCTGCAGACCCTAATAAGATT...AAGATCACTAGTGTCTAAATTCCATCGATGGCATTTCAGTCTATAGGTAAACTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR CAA 90 bp | CTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGCAAGCTGAGGAGGGTGGATaGTTTGAGCTCAGGAGCTCA | + |
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Preference number: 3 (lower is better) Translates to: LLQRIQMNNSHMKGYLGQAEEGG*FELRSS Trigger: TGAGCTCCTGAGCTCAAACAATCCACCCTCCTCAGC...TTGCCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR CAA 90 bp | TTTGAAACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTAGCTGAGGAGGGTGGATaGTTTGAGCTCAGGAGCTCA | + |
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Preference number: 3 (lower is better) Translates to: FETSNHDVVFVSSPHPELAEEGG*FELRSS Trigger: TGAGCTCCTGAGCTCAAACAATCCACCCTCCTCAGC...TAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGTTTCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR TCA 72 bp | GGATTATGTCTTGTTGACATAGGCCTGATGGATTATTaGCACAAATCTCCAGCCCCTCTCCCCTCTCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: GLCLVDIGLMDY*HKSPAPLPSLE Trigger: CTCCAGAGAGGGGAGAGGGGCTGGAGATTTGTGTCAATAATCCATCAGGCCTATGTCAACAAGACATAATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR GCA 72 bp | CTGAGCACAGGACTTGCTGACTTCATAAAGCTGGAGTaGGTCACCTTCCTGGCACATCAAAATGTTTGCCAA | + |
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Preference number: 3 (lower is better) Translates to: LSTGLADFIKLE*VTFLAHQNVCQ Trigger: TTGGCAAACATTTTGATGTGCCAGGAAGGTGACGCACTCCAGCTTTATGAAGTCAGCAAGTCCTGTGCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR CAA 90 bp | CACTCTAGCCTGCGTGACAAAGCAAGCCCCTGGGTGACAAAGCAAGATCCTGTCATACTCTATACCCTGTaGGTATGTTCAAAAGTTCAC | + |
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Preference number: 3 (lower is better) Translates to: HSSLRDKASPWVTKQDPVILYTL*VCSKVH Trigger: GTGAACTTTTGAACATACCAACAGGGTATAGAGTAT...GACAGGATCTTGCTTTGTCACCCAGGGGCTTGCTTTGTCACGCAGGCTAGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000285116.8 ENST00000417656.6 ENST00000571751.5 ENST00000633940.1 |
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| 3UTR-3UTR CAA 90 bp | TTTGAAACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTAAGGAGGGTGGATTGTTaGAGCTCAGGAGCTCAAGAC | + |
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Preference number: 3 (lower is better) Translates to: FETSNHDVVFVSSPHPELRRVDC*SSGAQD Trigger: GTCTTGAGCTCCTGAGCTCAAACAATCCACCCTCCT...TAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGTTTCAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| 3UTR-3UTR CAA 90 bp | CTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGCAAAGGAATTTAGGAGCTTaGTGTCAGGAACTGGGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LLQRIQMNNSHMKGYLGQRNLGA*CQELGS Trigger: TGACCCCAGTTCCTGACACAAAGCTCCTAAATTCCT...TTGCCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| 3UTR TCA 72 bp | GAAAGTTTGAAACTTCCAATCATGATGTGGTCTTTGTaGGCAGCCCCCATCCTGAGTTATCCAGGTGCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: ESLKLPIMMWSL*AAPILSYPGAH Trigger: ATGGGCACCTGGATAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGTTTCAAACTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| 3UTR CCA 72 bp | ATTATTGACACAAATCTCCAGCCCCTCTCCCCTCTCTaGAGGTGGGAGACTGAAAGTTTGAAACTTCCAATC | + |
|
Preference number: 3 (lower is better) Translates to: IIDTNLQPLSPL*RWETESLKLPI Trigger: GATTGGAAGTTTCAAACTTTCAGTCTCCCACCTCCAGAGAGGGGAGAGGGGCTGGAGATTTGTGTCAATAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| 3UTR-3UTR CAA 90 bp | TTTGAAACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTAAGGAATTTAGGAGCTTaGTGTCAGGAACTGGGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: FETSNHDVVFVSSPHPELRNLGA*CQELGS Trigger: TGACCCCAGTTCCTGACACAAAGCTCCTAAATTCCT...TAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGTTTCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGTGGGAGACTGAAAGTTaGAAACTTCCAATCATGATG | + |
|
Preference number: 3 (lower is better) Translates to: RLLQRIQMNNSHMKGYLGWETES*KLPIMM Trigger: CATCATGATTGGAAGTTTCAAACTTTCAGTCTCCCA...CCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| 3UTR-3UTR CAA 90 bp | ACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTATCCAGGATACTCTATACCCTGTaGGTATGTTCAAAAGTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: TSNHDVVFVSSPHPELSRILYTL*VCSKVH Trigger: GTGAACTTTTGAACATACCAACAGGGTATAGAGTAT...CCTGGATAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| 3UTR-3UTR CAA 90 bp | CTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGCAACAGGTAGTTAAATATTaGGTGAGAGGAGGTGAATCT | + |
|
Preference number: 3 (lower is better) Translates to: LLQRIQMNNSHMKGYLGQQVVKY*VRGGES Trigger: AGATTCACCTCCTCTCACCAAATATTTAACTACCTG...TTGCCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| 3UTR-3UTR CAA 90 bp | CTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGCAATGGGAGACTGAAAGTTaGAAACTTCCAATCATGATG | + |
|
Preference number: 3 (lower is better) Translates to: LLQRIQMNNSHMKGYLGQWETES*KLPIMM Trigger: CATCATGATTGGAAGTTTCAAACTTTCAGTCTCCCA...TTGCCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| 3UTR CCA 72 bp | TTATTACACTTTCATTACAGGTTGAAGTTTACAGACTaGTGTACACTAAATGCATTTCAGGTAAGCTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LLHFHYRLKFTD*CTLNAFQVSCS Trigger: GGAGCAGCTTACCTGAAATGCATTTAGTGTACACCAGTCTGTAAACTTCAACCTGTAATGAAAGTGTAATAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| 3UTR-3UTR CAA 90 bp | AAGTTTACCTATAGACTGAAATGCCATCGATGGAATTTAGACACTAGTGATCTTCAGGTAGTTAAATATTaGGTGAGAGGAGGTGAATCT | + |
|
Preference number: 3 (lower is better) Translates to: KFTYRLKCHRWNLDTSDLQVVKY*VRGGES Trigger: AGATTCACCTCCTCTCACCAAATATTTAACTACCTG...AAGATCACTAGTGTCTAAATTCCATCGATGGCATTTCAGTCTATAGGTAAACTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR GCA 90 bp | CACTCTAGCCTGCGTGACAAAGCAAGCCCCTGGGTGACAAAGCAAGATCCTGTCCGCTGGGTCTCCAGCTaGGGATACCGCAGTCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: HSSLRDKASPWVTKQDPVRWVSS*GYRSLR Trigger: ACGGAGACTGCGGTATCCGCAGCTGGAGACCCAGCG...GACAGGATCTTGCTTTGTCACCCAGGGGCTTGCTTTGTCACGCAGGCTAGAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000285116.8 ENST00000417656.6 ENST00000571751.5 ENST00000633940.1 |
||
| CDS-3UTR GCA 90 bp | CACTCTAGCCTGCGTGACAAAGCAAGCCCCTGGGTGACAAAGCAAGATCCTGTCGCAGGCGCACATCCATaGTTCCGAAGCGCAGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HSSLRDKASPWVTKQDPVAGAHP*FRSAGS Trigger: TGAGCCTGCGCTTCGGAAGCATGGATGTGCGCCTGC...GACAGGATCTTGCTTTGTCACCCAGGGGCTTGCTTTGTCACGCAGGCTAGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000571751.5 |
||
| CDS-3UTR CCA 90 bp | CACTCTAGCCTGCGTGACAAAGCAAGCCCCTGGGTGACAAAGCAAGATCCTGTCAAGGCTACTCGCCGCTaGGTCTCCAGCTGCGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: HSSLRDKASPWVTKQDPVKATRR*VSSCGY Trigger: GTATCCGCAGCTGGAGACCCAGCGGCGAGTAGCCTT...GACAGGATCTTGCTTTGTCACCCAGGGGCTTGCTTTGTCACGCAGGCTAGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000285116.8 ENST00000417656.6 ENST00000571751.5 ENST00000633940.1 |
||
| CDS-3UTR CCA 90 bp | ATTGACACAAATCTCCAGCCCCTCTCCCCTCTCTGGAGGTGGGAGACTGAAAGTGCTGAGGCAGGAGGATaGCGTGAACCTGGGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IDTNLQPLSPLWRWETESAEAGG*REPGRQ Trigger: CTGCCTCCCAGGTTCACGCCATCCTCCTGCCTCAGC...ACTTTCAGTCTCCCACCTCCAGAGAGGGGAGAGGGGCTGGAGATTTGTGTCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR TCA 90 bp | CACTCTAGCCTGCGTGACAAAGCAAGCCCCTGGGTGACAAAGCAAGATCCTGTCAGGTTGAGGCTGCAGTaGGCCATGTTTGCGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: HSSLRDKASPWVTKQDPVRLRLQ*AMFAPL Trigger: CAGTGGCGCAAACATGGCTCACTGCAGCCTCAACCT...GACAGGATCTTGCTTTGTCACCCAGGGGCTTGCTTTGTCACGCAGGCTAGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000285116.8 ENST00000417656.6 ENST00000571751.5 ENST00000633940.1 |
||
| CDS-3UTR CCA 90 bp | ATTGACACAAATCTCCAGCCCCTCTCCCCTCTCTGGAGGTGGGAGACTGAAAGTAAGGCTACTCGCCGCTaGGTCTCCAGCTGCGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: IDTNLQPLSPLWRWETESKATRR*VSSCGY Trigger: GTATCCGCAGCTGGAGACCCAGCGGCGAGTAGCCTT...ACTTTCAGTCTCCCACCTCCAGAGAGGGGAGAGGGGCTGGAGATTTGTGTCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR CCA 90 bp | CACTCTAGCCTGCGTGACAAAGCAAGCCCCTGGGTGACAAAGCAAGATCCTGTCCCCCTCTCCCCTCTCTaGAGGTGGGAGACTGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HSSLRDKASPWVTKQDPVPLSPL*RWETES Trigger: ACTTTCAGTCTCCCACCTCCAGAGAGGGGAGAGGGG...GACAGGATCTTGCTTTGTCACCCAGGGGCTTGCTTTGTCACGCAGGCTAGAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR TCA 90 bp | CACTCTAGCCTGCGTGACAAAGCAAGCCCCTGGGTGACAAAGCAAGATCCTGTCGGTCCAGAAGCATCCTaGGCACAGGACTTGCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: HSSLRDKASPWVTKQDPVGPEAS*AQDLLT Trigger: AGTCAGCAAGTCCTGTGCTCAGGATGCTTCTGGACC...GACAGGATCTTGCTTTGTCACCCAGGGGCTTGCTTTGTCACGCAGGCTAGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR GCA 90 bp | ACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTATCCAGGCGCTGGGTCTCCAGCTaGGGATACCGCAGTCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: TSNHDVVFVSSPHPELSRRWVSS*GYRSLR Trigger: ACGGAGACTGCGGTATCCGCAGCTGGAGACCCAGCG...CCTGGATAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR GCA 90 bp | CACTCTAGCCTGCGTGACAAAGCAAGCCCCTGGGTGACAAAGCAAGATCCTGTCCCATGTTTGCGCCACTaGACTCTAGCCTGCGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: HSSLRDKASPWVTKQDPVPCLRH*TLACVT Trigger: TGTCACGCAGGCTAGAGTGCAGTGGCGCAAACATGG...GACAGGATCTTGCTTTGTCACCCAGGGGCTTGCTTTGTCACGCAGGCTAGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000285116.8 ENST00000417656.6 ENST00000571751.5 ENST00000633940.1 |
||
| CDS-3UTR GCA 90 bp | ATTGACACAAATCTCCAGCCCCTCTCCCCTCTCTGGAGGTGGGAGACTGAAAGTTTGCCCAGACTGGAGTaGAGTGGCACGATCTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IDTNLQPLSPLWRWETESLPRLE*SGTISA Trigger: AGCCGAGATCGTGCCACTGCACTCCAGTCTGGGCAA...ACTTTCAGTCTCCCACCTCCAGAGAGGGGAGAGGGGCTGGAGATTTGTGTCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR CCA 90 bp | CACTCTAGCCTGCGTGACAAAGCAAGCCCCTGGGTGACAAAGCAAGATCCTGTCTACCGCAGTCTCCGTTaGAAGCCCAGGATGGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HSSLRDKASPWVTKQDPVYRSLR*KPRMVR Trigger: TCTCACCATCCTGGGCTTCCAACGGAGACTGCGGTA...GACAGGATCTTGCTTTGTCACCCAGGGGCTTGCTTTGTCACGCAGGCTAGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000285116.8 ENST00000417656.6 ENST00000571751.5 ENST00000633940.1 |
||
| CDS-3UTR CCA 90 bp | GGCGCATGCCGATCTGTACCCAATCTTATTAGGGTCTGCAGCATTGTTCACTCAGCTGAGGCAGGAGGATaGCGTGAACCTGGGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GACRSVPNLIRVCSIVHSAEAGG*REPGRQ Trigger: CTGCCTCCCAGGTTCACGCCATCCTCCTGCCTCAGC...TGAGTGAACAATGCTGCAGACCCTAATAAGATTGGGTACAGATCGGCATGCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR TCA 90 bp | CACTCTAGCCTGCGTGACAAAGCAAGCCCCTGGGTGACAAAGCAAGATCCTGTCAAGCAAGCCCCTGGGTaGCAAAGCAAGATCCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HSSLRDKASPWVTKQDPVKQAPG*QSKILS Trigger: AGACAGGATCTTGCTTTGTCACCCAGGGGCTTGCTT...GACAGGATCTTGCTTTGTCACCCAGGGGCTTGCTTTGTCACGCAGGCTAGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000285116.8 ENST00000417656.6 ENST00000571751.5 ENST00000633940.1 |
||
| CDS-3UTR TCA 90 bp | ACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTATCCAGGGAGGTGGGCGGATCATaGGGTCAGGAGATCGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: TSNHDVVFVSSPHPELSREVGGS*GQEIET Trigger: GGTCTCGATCTCCTGACCTCATGATCCGCCCACCTC...CCTGGATAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR TCA 90 bp | GGCGCATGCCGATCTGTACCCAATCTTATTAGGGTCTGCAGCATTGTTCACTCAAGGTTGAGGCTGCAGTaGGCCATGTTTGCGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GACRSVPNLIRVCSIVHSRLRLQ*AMFAPL Trigger: CAGTGGCGCAAACATGGCTCACTGCAGCCTCAACCT...TGAGTGAACAATGCTGCAGACCCTAATAAGATTGGGTACAGATCGGCATGCGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR TCA 90 bp | CTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGCAAGAGGTGGGCGGATCATaGGGTCAGGAGATCGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: LLQRIQMNNSHMKGYLGQEVGGS*GQEIET Trigger: GGTCTCGATCTCCTGACCTCATGATCCGCCCACCTC...TTGCCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR TCA 90 bp | CTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGCAAGAGCAGCCCCCATCCTaGGTTATCCAGGTGCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: LLQRIQMNNSHMKGYLGQEQPPS*VIQVPI Trigger: GATGGGCACCTGGATAACTCAGGATGGGGGCTGCTC...TTGCCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR TCA 90 bp | CACTCTAGCCTGCGTGACAAAGCAAGCCCCTGGGTGACAAAGCAAGATCCTGTCGGCCTGATGGATTATTaGCACAAATCTCCAGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: HSSLRDKASPWVTKQDPVGLMDY*HKSPAP Trigger: AGGGGCTGGAGATTTGTGTCAATAATCCATCAGGCC...GACAGGATCTTGCTTTGTCACCCAGGGGCTTGCTTTGTCACGCAGGCTAGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR TCA 90 bp | CACTCTAGCCTGCGTGACAAAGCAAGCCCCTGGGTGACAAAGCAAGATCCTGTCGAGCACAGGACTTGCTaGCTTCATAAAGCTGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: HSSLRDKASPWVTKQDPVEHRTC*LHKAGV Trigger: CACTCCAGCTTTATGAAGTCAGCAAGTCCTGTGCTC...GACAGGATCTTGCTTTGTCACCCAGGGGCTTGCTTTGTCACGCAGGCTAGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR CCA 90 bp | CACTCTAGCCTGCGTGACAAAGCAAGCCCCTGGGTGACAAAGCAAGATCCTGTCGACAAAGCAAGCCCCTaGGTGACAAAGCAAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: HSSLRDKASPWVTKQDPVDKASP*VTKQDP Trigger: AGGATCTTGCTTTGTCACCCAGGGGCTTGCTTTGTC...GACAGGATCTTGCTTTGTCACCCAGGGGCTTGCTTTGTCACGCAGGCTAGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000285116.8 ENST00000417656.6 ENST00000571751.5 ENST00000633940.1 |
||
| CDS-3UTR CCA 90 bp | CACTCTAGCCTGCGTGACAAAGCAAGCCCCTGGGTGACAAAGCAAGATCCTGTCAAAATTAGCCAGGCATaGTGGCGCACGCTTGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: HSSLRDKASPWVTKQDPVKISQA*WRTLVV Trigger: GACTACAAGCGTGCGCCACCATGCCTGGCTAATTTT...GACAGGATCTTGCTTTGTCACCCAGGGGCTTGCTTTGTCACGCAGGCTAGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000285116.8 ENST00000417656.6 ENST00000571751.5 ENST00000633940.1 |
||
| CDS-3UTR TCA 90 bp | CACTCTAGCCTGCGTGACAAAGCAAGCCCCTGGGTGACAAAGCAAGATCCTGTCTGGGTTACTGTTACTTaGGGCAAATGGGAAGGAACG | + |
|
Preference number: 4 (lower is better) Translates to: HSSLRDKASPWVTKQDPVWVTVT*GKWEGT Trigger: CGTTCCTTCCCATTTGCCTCAAGTAACAGTAACCCA...GACAGGATCTTGCTTTGTCACCCAGGGGCTTGCTTTGTCACGCAGGCTAGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000285116.8 ENST00000417656.6 ENST00000571751.5 ENST00000633940.1 |
||
| CDS-3UTR TCA 90 bp | CTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGCAAAGGTTGAGGCTGCAGTaGGCCATGTTTGCGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LLQRIQMNNSHMKGYLGQRLRLQ*AMFAPL Trigger: CAGTGGCGCAAACATGGCTCACTGCAGCCTCAACCT...TTGCCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR GCA 90 bp | AGGCTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGCACTGCACTCTAGCCTaGGTGACAAAGCAAGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RLLQRIQMNNSHMKGYLGHCTLA*VTKQAP Trigger: AGGGGCTTGCTTTGTCACGCAGGCTAGAGTGCAGTG...CCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR GCA 90 bp | GGCGCATGCCGATCTGTACCCAATCTTATTAGGGTCTGCAGCATTGTTCACTCACCATGTTTGCGCCACTaGACTCTAGCCTGCGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: GACRSVPNLIRVCSIVHSPCLRH*TLACVT Trigger: TGTCACGCAGGCTAGAGTGCAGTGGCGCAAACATGG...TGAGTGAACAATGCTGCAGACCCTAATAAGATTGGGTACAGATCGGCATGCGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR CCA 90 bp | ACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTATCCAGGTACCGCAGTCTCCGTTaGAAGCCCAGGATGGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TSNHDVVFVSSPHPELSRYRSLR*KPRMVR Trigger: TCTCACCATCCTGGGCTTCCAACGGAGACTGCGGTA...CCTGGATAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR CCA 90 bp | ATTGACACAAATCTCCAGCCCCTCTCCCCTCTCTGGAGGTGGGAGACTGAAAGTAAAATTAGCCAGGCATaGTGGCGCACGCTTGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: IDTNLQPLSPLWRWETESKISQA*WRTLVV Trigger: GACTACAAGCGTGCGCCACCATGCCTGGCTAATTTT...ACTTTCAGTCTCCCACCTCCAGAGAGGGGAGAGGGGCTGGAGATTTGTGTCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR TCA 90 bp | CACTCTAGCCTGCGTGACAAAGCAAGCCCCTGGGTGACAAAGCAAGATCCTGTCTTCAGGATCAAGATCTaGTCCCTTAACACAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HSSLRDKASPWVTKQDPVFRIKI*SLNTAL Trigger: CAGAGCTGTGTTAAGGGATCAGATCTTGATCCTGAA...GACAGGATCTTGCTTTGTCACCCAGGGGCTTGCTTTGTCACGCAGGCTAGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR TCA 90 bp | ACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTATCCAGGATGATGTGGTCTTTGTaGGCAGCCCCCATCCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TSNHDVVFVSSPHPELSRMMWSL*AAPILS Trigger: ACTCAGGATGGGGGCTGCTCACAAAGACCACATCAT...CCTGGATAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR GCA 90 bp | CTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGCAACCATGTTTGCGCCACTaGACTCTAGCCTGCGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LLQRIQMNNSHMKGYLGQPCLRH*TLACVT Trigger: TGTCACGCAGGCTAGAGTGCAGTGGCGCAAACATGG...TTGCCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR GCA 90 bp | ATTGACACAAATCTCCAGCCCCTCTCCCCTCTCTGGAGGTGGGAGACTGAAAGTTTCATAAAGCTGGAGTaGGTCACCTTCCTGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: IDTNLQPLSPLWRWETESFIKLE*VTFLAH Trigger: ATGTGCCAGGAAGGTGACGCACTCCAGCTTTATGAA...ACTTTCAGTCTCCCACCTCCAGAGAGGGGAGAGGGGCTGGAGATTTGTGTCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR CCA 90 bp | TTTGAAACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTACGCTGCAGTCCGGCCTaGGTGAAAGAGCGAGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: FETSNHDVVFVSSPHPELRCSPA*VKERDC Trigger: ACAGTCTCGCTCTTTCACCCAGGCCGGACTGCAGCG...TAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGTTTCAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR GCA 90 bp | TTTGAAACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTATTGCCCAGACTGGAGTaGAGTGGCACGATCTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FETSNHDVVFVSSPHPELLPRLE*SGTISA Trigger: AGCCGAGATCGTGCCACTGCACTCCAGTCTGGGCAA...TAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGTTTCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR CCA 90 bp | GGCGCATGCCGATCTGTACCCAATCTTATTAGGGTCTGCAGCATTGTTCACTCAAAAATTAGCCAGGCATaGTGGCGCACGCTTGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GACRSVPNLIRVCSIVHSKISQA*WRTLVV Trigger: GACTACAAGCGTGCGCCACCATGCCTGGCTAATTTT...TGAGTGAACAATGCTGCAGACCCTAATAAGATTGGGTACAGATCGGCATGCGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR TCA 90 bp | CACTCTAGCCTGCGTGACAAAGCAAGCCCCTGGGTGACAAAGCAAGATCCTGTCCAGCTTTCAAAGTTGTaGACTCCTTTATGTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HSSLRDKASPWVTKQDPVQLSKL*TPLCQL Trigger: AAGCTGACATAAAGGAGTTCACAACTTTGAAAGCTG...GACAGGATCTTGCTTTGTCACCCAGGGGCTTGCTTTGTCACGCAGGCTAGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000285116.8 ENST00000417656.6 ENST00000571751.5 ENST00000633940.1 |
||
| CDS-3UTR TCA 90 bp | ATTGACACAAATCTCCAGCCCCTCTCCCCTCTCTGGAGGTGGGAGACTGAAAGTCGGATTATGTCTTGTTaGCATAGGCCTGATGGATTA | + |
|
Preference number: 4 (lower is better) Translates to: IDTNLQPLSPLWRWETESRIMSC*HRPDGL Trigger: TAATCCATCAGGCCTATGTCAACAAGACATAATCCG...ACTTTCAGTCTCCCACCTCCAGAGAGGGGAGAGGGGCTGGAGATTTGTGTCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR GCA 90 bp | GGCGCATGCCGATCTGTACCCAATCTTATTAGGGTCTGCAGCATTGTTCACTCAGCATTTCAGGTAAGCTaGTCCCTAAGGACCTATACG | + |
|
Preference number: 4 (lower is better) Translates to: GACRSVPNLIRVCSIVHSAFQVS*SLRTYT Trigger: CGTATAGGTCCTTAGGGAGCAGCTTACCTGAAATGC...TGAGTGAACAATGCTGCAGACCCTAATAAGATTGGGTACAGATCGGCATGCGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR CCA 90 bp | TTTGAAACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTATACCGCAGTCTCCGTTaGAAGCCCAGGATGGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FETSNHDVVFVSSPHPELYRSLR*KPRMVR Trigger: TCTCACCATCCTGGGCTTCCAACGGAGACTGCGGTA...TAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGTTTCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR CCA 90 bp | CACTCTAGCCTGCGTGACAAAGCAAGCCCCTGGGTGACAAAGCAAGATCCTGTCTTCAAGGTAGGTTCCTaGCCACAGTTTCTTAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: HSSLRDKASPWVTKQDPVFKVGS*PQFLND Trigger: ATCATTAAGAAACTGTGGCCAGGAACCTACCTTGAA...GACAGGATCTTGCTTTGTCACCCAGGGGCTTGCTTTGTCACGCAGGCTAGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000285116.8 ENST00000417656.6 ENST00000571751.5 ENST00000633940.1 |
||
| CDS-3UTR CCA 90 bp | ATTGACACAAATCTCCAGCCCCTCTCCCCTCTCTGGAGGTGGGAGACTGAAAGTCTTTGTGTCAGGAACTaGGGTCAAAGACCAAATACT | + |
|
Preference number: 4 (lower is better) Translates to: IDTNLQPLSPLWRWETESLCVRN*GQRPNT Trigger: AGTATTTGGTCTTTGACCCCAGTTCCTGACACAAAG...ACTTTCAGTCTCCCACCTCCAGAGAGGGGAGAGGGGCTGGAGATTTGTGTCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR CCA 90 bp | ACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTATCCAGGAGTGCGTCACCTTCCTaGCACATCAAAATGTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TSNHDVVFVSSPHPELSRSASPS*HIKMFA Trigger: GGCAAACATTTTGATGTGCCAGGAAGGTGACGCACT...CCTGGATAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR TCA 90 bp | CACTCTAGCCTGCGTGACAAAGCAAGCCCCTGGGTGACAAAGCAAGATCCTGTCATTCACAGAGTTCCTTaGGTGAATTGTTGGTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HSSLRDKASPWVTKQDPVIHRVP*VNCWFV Trigger: AACAAACCAACAATTCACTCAAGGAACTCTGTGAAT...GACAGGATCTTGCTTTGTCACCCAGGGGCTTGCTTTGTCACGCAGGCTAGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000285116.8 ENST00000417656.6 ENST00000571751.5 ENST00000633940.1 |
||
| CDS-3UTR TCA 90 bp | AGGCTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGTTCAGGATCAAGATCTaGTCCCTTAACACAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLLQRIQMNNSHMKGYLGFRIKI*SLNTAL Trigger: CAGAGCTGTGTTAAGGGATCAGATCTTGATCCTGAA...CCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR TCA 90 bp | CACTCTAGCCTGCGTGACAAAGCAAGCCCCTGGGTGACAAAGCAAGATCCTGTCATATTCAGTAACACGTaGAACTTCTTGTCAGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HSSLRDKASPWVTKQDPVIFSNT*NFLSAF Trigger: GAAAGCTGACAAGAAGTTTCACGTGTTACTGAATAT...GACAGGATCTTGCTTTGTCACCCAGGGGCTTGCTTTGTCACGCAGGCTAGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000285116.8 ENST00000417656.6 ENST00000571751.5 ENST00000633940.1 |
||
| CDS-3UTR TCA 90 bp | TTTGAAACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTAAAGCAAGCCCCTGGGTaGCAAAGCAAGATCCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FETSNHDVVFVSSPHPELKQAPG*QSKILS Trigger: AGACAGGATCTTGCTTTGTCACCCAGGGGCTTGCTT...TAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGTTTCAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR GCA 90 bp | CACTCTAGCCTGCGTGACAAAGCAAGCCCCTGGGTGACAAAGCAAGATCCTGTCTTTAGTTCCATTATGTaGCTAGTACAGAGGCGTATT | + |
|
Preference number: 4 (lower is better) Translates to: HSSLRDKASPWVTKQDPVFSSIM*LVQRRI Trigger: AATACGCCTCTGTACTAGGCACATAATGGAACTAAA...GACAGGATCTTGCTTTGTCACCCAGGGGCTTGCTTTGTCACGCAGGCTAGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR CCA 90 bp | ACTTTGGAAATTACAAGGGTTTTAGGAGCTCTGAACAAGGAACTAGATAGGAAGCGCTGCAGTCCGGCCTaGGTGAAAGAGCGAGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: TLEITRVLGALNKELDRKRCSPA*VKERDC Trigger: ACAGTCTCGCTCTTTCACCCAGGCCGGACTGCAGCG...CTTCCTATCTAGTTCCTTGTTCAGAGCTCCTAAAACCCTTGTAATTTCCAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR TCA 90 bp | ATTGACACAAATCTCCAGCCCCTCTCCCCTCTCTGGAGGTGGGAGACTGAAAGTATTCACAGAGTTCCTTaGGTGAATTGTTGGTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IDTNLQPLSPLWRWETESIHRVP*VNCWFV Trigger: AACAAACCAACAATTCACTCAAGGAACTCTGTGAAT...ACTTTCAGTCTCCCACCTCCAGAGAGGGGAGAGGGGCTGGAGATTTGTGTCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR TCA 90 bp | ATTGACACAAATCTCCAGCCCCTCTCCCCTCTCTGGAGGTGGGAGACTGAAAGTCTAACCTCATCAGCTTaGTCTTTTTCTTCCAATATC | + |
|
Preference number: 4 (lower is better) Translates to: IDTNLQPLSPLWRWETESLTSSA*SFSSNI Trigger: GATATTGGAAGAAAAAGATCAAGCTGATGAGGTTAG...ACTTTCAGTCTCCCACCTCCAGAGAGGGGAGAGGGGCTGGAGATTTGTGTCAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR TCA 90 bp | ATTGACACAAATCTCCAGCCCCTCTCCCCTCTCTGGAGGTGGGAGACTGAAAGTACTTTCATTACAGGTTaGAGTTTACAGACTGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: IDTNLQPLSPLWRWETESTFITG*SLQTGV Trigger: TACACCAGTCTGTAAACTTCAACCTGTAATGAAAGT...ACTTTCAGTCTCCCACCTCCAGAGAGGGGAGAGGGGCTGGAGATTTGTGTCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR TCA 90 bp | TTTGAAACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTAGGCCTGATGGATTATTaGCACAAATCTCCAGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FETSNHDVVFVSSPHPELGLMDY*HKSPAP Trigger: AGGGGCTGGAGATTTGTGTCAATAATCCATCAGGCC...TAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGTTTCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR TCA 90 bp | ACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTATCCAGGCGGATTATGTCTTGTTaGCATAGGCCTGATGGATTA | + |
|
Preference number: 4 (lower is better) Translates to: TSNHDVVFVSSPHPELSRRIMSC*HRPDGL Trigger: TAATCCATCAGGCCTATGTCAACAAGACATAATCCG...CCTGGATAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR GCA 90 bp | AAGTTTACCTATAGACTGAAATGCCATCGATGGAATTTAGACACTAGTGATCTTCGCTGGGTCTCCAGCTaGGGATACCGCAGTCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: KFTYRLKCHRWNLDTSDLRWVSS*GYRSLR Trigger: ACGGAGACTGCGGTATCCGCAGCTGGAGACCCAGCG...AAGATCACTAGTGTCTAAATTCCATCGATGGCATTTCAGTCTATAGGTAAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR GCA 90 bp | ATTGACACAAATCTCCAGCCCCTCTCCCCTCTCTGGAGGTGGGAGACTGAAAGTACCTATAGACTGAAATaGCATCGATGGAATTTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: IDTNLQPLSPLWRWETESTYRLK*HRWNLD Trigger: GTCTAAATTCCATCGATGGCATTTCAGTCTATAGGT...ACTTTCAGTCTCCCACCTCCAGAGAGGGGAGAGGGGCTGGAGATTTGTGTCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR CCA 90 bp | ACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTATCCAGGTACTTCTTTGCTCTTTaGGAGGCTTCTTTACGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TSNHDVVFVSSPHPELSRYFFAL*EASLRV Trigger: AACCCGTAAAGAAGCCTCCCAAAGAGCAAAGAAGTA...CCTGGATAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR CCA 90 bp | TTTGAAACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTAGACAAAGCAAGCCCCTaGGTGACAAAGCAAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: FETSNHDVVFVSSPHPELDKASP*VTKQDP Trigger: AGGATCTTGCTTTGTCACCCAGGGGCTTGCTTTGTC...TAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGTTTCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR CCA 90 bp | ACTTTGGAAATTACAAGGGTTTTAGGAGCTCTGAACAAGGAACTAGATAGGAAGCCCCTCTCCCCTCTCTaGAGGTGGGAGACTGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TLEITRVLGALNKELDRKPLSPL*RWETES Trigger: ACTTTCAGTCTCCCACCTCCAGAGAGGGGAGAGGGG...CTTCCTATCTAGTTCCTTGTTCAGAGCTCCTAAAACCCTTGTAATTTCCAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR TCA 90 bp | AGGCTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGCAGCTTTCAAAGTTGTaGACTCCTTTATGTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RLLQRIQMNNSHMKGYLGQLSKL*TPLCQL Trigger: AAGCTGACATAAAGGAGTTCACAACTTTGAAAGCTG...CCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR TCA 90 bp | ACTTTGGAAATTACAAGGGTTTTAGGAGCTCTGAACAAGGAACTAGATAGGAAGGGTCCAGAAGCATCCTaGGCACAGGACTTGCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: TLEITRVLGALNKELDRKGPEAS*AQDLLT Trigger: AGTCAGCAAGTCCTGTGCTCAGGATGCTTCTGGACC...CTTCCTATCTAGTTCCTTGTTCAGAGCTCCTAAAACCCTTGTAATTTCCAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR GCA 90 bp | TTTGAAACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTATTCATAAAGCTGGAGTaGGTCACCTTCCTGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: FETSNHDVVFVSSPHPELFIKLE*VTFLAH Trigger: ATGTGCCAGGAAGGTGACGCACTCCAGCTTTATGAA...TAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGTTTCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR CCA 90 bp | AGGCTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGTTCAAGGTAGGTTCCTaGCCACAGTTTCTTAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: RLLQRIQMNNSHMKGYLGFKVGS*PQFLND Trigger: ATCATTAAGAAACTGTGGCCAGGAACCTACCTTGAA...CCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR CCA 90 bp | TTTGAAACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTATCCCCTCTCTGGAGGTaGGAGACTGAAAGTTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FETSNHDVVFVSSPHPELSPLWR*ETESLK Trigger: TTTCAAACTTTCAGTCTCCCACCTCCAGAGAGGGGA...TAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGTTTCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR CCA 90 bp | TTTGAAACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTAAGTGCGTCACCTTCCTaGCACATCAAAATGTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: FETSNHDVVFVSSPHPELSASPS*HIKMFA Trigger: GGCAAACATTTTGATGTGCCAGGAAGGTGACGCACT...TAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGTTTCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR TCA 90 bp | ACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTATCCAGGATTCACAGAGTTCCTTaGGTGAATTGTTGGTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TSNHDVVFVSSPHPELSRIHRVP*VNCWFV Trigger: AACAAACCAACAATTCACTCAAGGAACTCTGTGAAT...CCTGGATAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR TCA 90 bp | GGCGCATGCCGATCTGTACCCAATCTTATTAGGGTCTGCAGCATTGTTCACTCAATATTCAGTAACACGTaGAACTTCTTGTCAGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GACRSVPNLIRVCSIVHSIFSNT*NFLSAF Trigger: GAAAGCTGACAAGAAGTTTCACGTGTTACTGAATAT...TGAGTGAACAATGCTGCAGACCCTAATAAGATTGGGTACAGATCGGCATGCGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR TCA 90 bp | AGGCTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGCTAACCTCATCAGCTTaGTCTTTTTCTTCCAATATC | + |
|
Preference number: 4 (lower is better) Translates to: RLLQRIQMNNSHMKGYLGLTSSA*SFSSNI Trigger: GATATTGGAAGAAAAAGATCAAGCTGATGAGGTTAG...CCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR TCA 90 bp | ACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTATCCAGGAGTTTACCTATAGACTaGAATGCCATCGATGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: TSNHDVVFVSSPHPELSRSLPID*NAIDGI Trigger: AATTCCATCGATGGCATTTCAGTCTATAGGTAAACT...CCTGGATAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR TCA 90 bp | GGCGCATGCCGATCTGTACCCAATCTTATTAGGGTCTGCAGCATTGTTCACTCAACTTTCATTACAGGTTaGAGTTTACAGACTGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GACRSVPNLIRVCSIVHSTFITG*SLQTGV Trigger: TACACCAGTCTGTAAACTTCAACCTGTAATGAAAGT...TGAGTGAACAATGCTGCAGACCCTAATAAGATTGGGTACAGATCGGCATGCGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR TCA 90 bp | ACTTTGGAAATTACAAGGGTTTTAGGAGCTCTGAACAAGGAACTAGATAGGAAGATGATGTGGTCTTTGTaGGCAGCCCCCATCCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TLEITRVLGALNKELDRKMMWSL*AAPILS Trigger: ACTCAGGATGGGGGCTGCTCACAAAGACCACATCAT...CTTCCTATCTAGTTCCTTGTTCAGAGCTCCTAAAACCCTTGTAATTTCCAAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR GCA 90 bp | GGCGCATGCCGATCTGTACCCAATCTTATTAGGGTCTGCAGCATTGTTCACTCATTTAGTTCCATTATGTaGCTAGTACAGAGGCGTATT | + |
|
Preference number: 4 (lower is better) Translates to: GACRSVPNLIRVCSIVHSFSSIM*LVQRRI Trigger: AATACGCCTCTGTACTAGGCACATAATGGAACTAAA...TGAGTGAACAATGCTGCAGACCCTAATAAGATTGGGTACAGATCGGCATGCGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR GCA 90 bp | GGCGCATGCCGATCTGTACCCAATCTTATTAGGGTCTGCAGCATTGTTCACTCAAATCTTATTAGGGTCTaGAGCATTGTTCACTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: GACRSVPNLIRVCSIVHSNLIRV*SIVHST Trigger: TGTTGAGTGAACAATGCTGCAGACCCTAATAAGATT...TGAGTGAACAATGCTGCAGACCCTAATAAGATTGGGTACAGATCGGCATGCGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR GCA 90 bp | CTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGCAATCCTTAATACTTCTTTaGTCTTTGGGAGGCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLQRIQMNNSHMKGYLGQSLILL*SLGGFF Trigger: AAAGAAGCCTCCCAAAGAGCAAAGAAGTATTAAGGA...TTGCCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR GCA 90 bp | CTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGCAAAATCTTATTAGGGTCTaGAGCATTGTTCACTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LLQRIQMNNSHMKGYLGQNLIRV*SIVHST Trigger: TGTTGAGTGAACAATGCTGCAGACCCTAATAAGATT...TTGCCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR CCA 90 bp | TTTGAAACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTATACTTCTTTGCTCTTTaGGAGGCTTCTTTACGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: FETSNHDVVFVSSPHPELYFFAL*EASLRV Trigger: AACCCGTAAAGAAGCCTCCCAAAGAGCAAAGAAGTA...TAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGTTTCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR TCA 90 bp | ACTTTGGAAATTACAAGGGTTTTAGGAGCTCTGAACAAGGAACTAGATAGGAAGTGGGTTACTGTTACTTaGGGCAAATGGGAAGGAACG | + |
|
Preference number: 4 (lower is better) Translates to: TLEITRVLGALNKELDRKWVTVT*GKWEGT Trigger: CGTTCCTTCCCATTTGCCTCAAGTAACAGTAACCCA...CTTCCTATCTAGTTCCTTGTTCAGAGCTCCTAAAACCCTTGTAATTTCCAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR TCA 90 bp | TTTGAAACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTACAGCTTTCAAAGTTGTaGACTCCTTTATGTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FETSNHDVVFVSSPHPELQLSKL*TPLCQL Trigger: AAGCTGACATAAAGGAGTTCACAACTTTGAAAGCTG...TAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGTTTCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR TCA 90 bp | TTTGAAACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTAAGTTTACCTATAGACTaGAATGCCATCGATGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: FETSNHDVVFVSSPHPELSLPID*NAIDGI Trigger: AATTCCATCGATGGCATTTCAGTCTATAGGTAAACT...TAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGTTTCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR CCA 90 bp | AAGTTTACCTATAGACTGAAATGCCATCGATGGAATTTAGACACTAGTGATCTTGACAAAGCAAGCCCCTaGGTGACAAAGCAAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: KFTYRLKCHRWNLDTSDLDKASP*VTKQDP Trigger: AGGATCTTGCTTTGTCACCCAGGGGCTTGCTTTGTC...AAGATCACTAGTGTCTAAATTCCATCGATGGCATTTCAGTCTATAGGTAAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR CCA 90 bp | TTTGAAACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTACTGAAATGCCATCGATaGAATTTAGACACTAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: FETSNHDVVFVSSPHPELLKCHR*NLDTSD Trigger: ATCACTAGTGTCTAAATTCCATCGATGGCATTTCAG...TAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGTTTCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR GCA 90 bp | ACTTTGGAAATTACAAGGGTTTTAGGAGCTCTGAACAAGGAACTAGATAGGAAGCTGGTGTACACTAAATaGATTTCAGGTAAGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TLEITRVLGALNKELDRKLVYTK*ISGKLL Trigger: GAGCAGCTTACCTGAAATGCATTTAGTGTACACCAG...CTTCCTATCTAGTTCCTTGTTCAGAGCTCCTAAAACCCTTGTAATTTCCAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR CCA 90 bp | AAGTTTACCTATAGACTGAAATGCCATCGATGGAATTTAGACACTAGTGATCTTTCCCCTCTCTGGAGGTaGGAGACTGAAAGTTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KFTYRLKCHRWNLDTSDLSPLWR*ETESLK Trigger: TTTCAAACTTTCAGTCTCCCACCTCCAGAGAGGGGA...AAGATCACTAGTGTCTAAATTCCATCGATGGCATTTCAGTCTATAGGTAAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR CCA 90 bp | ACTTTGGAAATTACAAGGGTTTTAGGAGCTCTGAACAAGGAACTAGATAGGAAGTTCAAGGTAGGTTCCTaGCCACAGTTTCTTAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: TLEITRVLGALNKELDRKFKVGS*PQFLND Trigger: ATCATTAAGAAACTGTGGCCAGGAACCTACCTTGAA...CTTCCTATCTAGTTCCTTGTTCAGAGCTCCTAAAACCCTTGTAATTTCCAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| 3UTR CAA 72 bp | GACCAAATACTAGAACAAAAGATGTACTCCATCACTTaGGAAATTACAAGGGTTTTAGGAGCTCTGAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: DQILEQKMYSIT*EITRVLGALNK Trigger: CTTGTTCAGAGCTCCTAAAACCCTTGTAATTTCCAAAGTGATGGAGTACATCTTTTGTTCTAGTATTTGGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR GCA 90 bp | AAGTTTACCTATAGACTGAAATGCCATCGATGGAATTTAGACACTAGTGATCTTACCTATAGACTGAAATaGCATCGATGGAATTTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KFTYRLKCHRWNLDTSDLTYRLK*HRWNLD Trigger: GTCTAAATTCCATCGATGGCATTTCAGTCTATAGGT...AAGATCACTAGTGTCTAAATTCCATCGATGGCATTTCAGTCTATAGGTAAACTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS GCA 90 bp | AAGTCCGTCCGGGAGCAAAAGGCTACTCGCCGCTGGGTCTCCAGCTaGGGATACCGCAGTCTCCGTTGGAAGCCCAGGATGGTGAGACGG | + |
|
Preference number: 5 (lower is better) Translates to: KSVREQKATRRWVSS*GYRSLRWKPRMVRR Trigger: CCGTCTCACCATCCTGGGCTTCCAACGGAGACTGCGGTATCCGCAGCTGGAGACCCAGCGGCGAGTAGCCTTTTGCTCCCGGACGGACTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000285116.8 ENST00000398452.6 ENST00000417656.6 ENST00000488454.5 ENST00000494518.1 ENST00000571318.5 ENST00000571751.5 ENST00000576078.2 ENST00000616604.2 ENST00000633940.1 |
||
| CDS CCA 90 bp | GACTCCAACCTCAAGTCCGTCCGGGAGCAAAAGGCTACTCGCCGCTaGGTCTCCAGCTGCGGATACCGCAGTCTCCGTTGGAAGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: DSNLKSVREQKATRR*VSSCGYRSLRWKPR Trigger: CCTGGGCTTCCAACGGAGACTGCGGTATCCGCAGCTGGAGACCCAGCGGCGAGTAGCCTTTTGCTCCCGGACGGACTTGAGGTTGGAGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000398452.6 ENST00000494518.1 ENST00000571318.5 ENST00000616604.2 |
||
| CDS CCA 90 bp | TTTAAGCCTCTCAAGTCCGTCCGGGAGCAAAAGGCTACTCGCCGCTaGGTCTCCAGCTGCGGATACCGCAGTCTCCGTTGGAAGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FKPLKSVREQKATRR*VSSCGYRSLRWKPR Trigger: CCTGGGCTTCCAACGGAGACTGCGGTATCCGCAGCTGGAGACCCAGCGGCGAGTAGCCTTTTGCTCCCGGACGGACTTGAGAGGCTTAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000285116.8 ENST00000417656.6 ENST00000488454.5 ENST00000571751.5 ENST00000576078.2 ENST00000633940.1 |
||
| CDS CCA 90 bp | GCTACTCGCCGCTGGGTCTCCAGCTGCGGATACCGCAGTCTCCGTTaGAAGCCCAGGATGGTGAGACGGGACTCTGTAAGCAAAATTCAA | + |
|
Preference number: 5 (lower is better) Translates to: ATRRWVSSCGYRSLR*KPRMVRRDSVSKIQ Trigger: TTGAATTTTGCTTACAGAGTCCCGTCTCACCATCCTGGGCTTCCAACGGAGACTGCGGTATCCGCAGCTGGAGACCCAGCGGCGAGTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000285116.8 ENST00000398452.6 ENST00000417656.6 ENST00000488454.5 ENST00000494518.1 ENST00000571318.5 ENST00000571751.5 ENST00000576078.2 ENST00000616604.2 ENST00000633940.1 |
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| CDS-3UTR CAA 90 bp | CACTCTAGCCTGCGTGACAAAGCAAGCCCCTGGGTGACAAAGCAAGATCCTGTCATACCGCAGTCTCCGTaGGAAGCCCAGGATGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: HSSLRDKASPWVTKQDPVIPQSP*EAQDGE Trigger: CTCACCATCCTGGGCTTCCAACGGAGACTGCGGTAT...GACAGGATCTTGCTTTGTCACCCAGGGGCTTGCTTTGTCACGCAGGCTAGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000285116.8 ENST00000417656.6 ENST00000571751.5 ENST00000633940.1 |
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| CDS-3UTR CAA 90 bp | ACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTATCCAGGATACCGCAGTCTCCGTaGGAAGCCCAGGATGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TSNHDVVFVSSPHPELSRIPQSP*EAQDGE Trigger: CTCACCATCCTGGGCTTCCAACGGAGACTGCGGTAT...CCTGGATAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| CDS-3UTR CAA 90 bp | ATTGACACAAATCTCCAGCCCCTCTCCCCTCTCTGGAGGTGGGAGACTGAAAGTAGGAGGGTGGATTGTTaGAGCTCAGGAGCTCAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: IDTNLQPLSPLWRWETESRRVDC*SSGAQD Trigger: GTCTTGAGCTCCTGAGCTCAAACAATCCACCCTCCT...ACTTTCAGTCTCCCACCTCCAGAGAGGGGAGAGGGGCTGGAGATTTGTGTCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR CAA 90 bp | ATTGACACAAATCTCCAGCCCCTCTCCCCTCTCTGGAGGTGGGAGACTGAAAGTAGGAATTTAGGAGCTTaGTGTCAGGAACTGGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: IDTNLQPLSPLWRWETESRNLGA*CQELGS Trigger: TGACCCCAGTTCCTGACACAAAGCTCCTAAATTCCT...ACTTTCAGTCTCCCACCTCCAGAGAGGGGAGAGGGGCTGGAGATTTGTGTCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR CAA 90 bp | CACTCTAGCCTGCGTGACAAAGCAAGCCCCTGGGTGACAAAGCAAGATCCTGTCGATTCACAGAGTTCCTaGAGTGAATTGTTGGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: HSSLRDKASPWVTKQDPVDSQSS*SELLVC Trigger: ACAAACCAACAATTCACTCAAGGAACTCTGTGAATC...GACAGGATCTTGCTTTGTCACCCAGGGGCTTGCTTTGTCACGCAGGCTAGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000285116.8 ENST00000417656.6 ENST00000571751.5 ENST00000633940.1 |
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| CDS-3UTR CAA 90 bp | AGGCTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGAGGAATTTAGGAGCTTaGTGTCAGGAACTGGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RLLQRIQMNNSHMKGYLGRNLGA*CQELGS Trigger: TGACCCCAGTTCCTGACACAAAGCTCCTAAATTCCT...CCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| CDS-3UTR CAA 90 bp | GGCGCATGCCGATCTGTACCCAATCTTATTAGGGTCTGCAGCATTGTTCACTCAATACTTCTTTGCTCTTaGGGAGGCTTCTTTACGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GACRSVPNLIRVCSIVHSILLCS*GGFFTG Trigger: ACCCGTAAAGAAGCCTCCCAAAGAGCAAAGAAGTAT...TGAGTGAACAATGCTGCAGACCCTAATAAGATTGGGTACAGATCGGCATGCGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR CAA 90 bp | CACTCTAGCCTGCGTGACAAAGCAAGCCCCTGGGTGACAAAGCAAGATCCTGTCTACGAAGGAACACCATaGAACTCATCACAAGTTATA | + |
|
Preference number: 5 (lower is better) Translates to: HSSLRDKASPWVTKQDPVYEGTP*NSSQVI Trigger: TATAACTTGTGATGAGTTCAATGGTGTTCCTTCGTA...GACAGGATCTTGCTTTGTCACCCAGGGGCTTGCTTTGTCACGCAGGCTAGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| CDS-3UTR CAA 90 bp | ATTGACACAAATCTCCAGCCCCTCTCCCCTCTCTGGAGGTGGGAGACTGAAAGTTGGGAGACTGAAAGTTaGAAACTTCCAATCATGATG | + |
|
Preference number: 5 (lower is better) Translates to: IDTNLQPLSPLWRWETESWETES*KLPIMM Trigger: CATCATGATTGGAAGTTTCAAACTTTCAGTCTCCCA...ACTTTCAGTCTCCCACCTCCAGAGAGGGGAGAGGGGCTGGAGATTTGTGTCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR CAA 90 bp | ACTTTGGAAATTACAAGGGTTTTAGGAGCTCTGAACAAGGAACTAGATAGGAAGATACCGCAGTCTCCGTaGGAAGCCCAGGATGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TLEITRVLGALNKELDRKIPQSP*EAQDGE Trigger: CTCACCATCCTGGGCTTCCAACGGAGACTGCGGTAT...CTTCCTATCTAGTTCCTTGTTCAGAGCTCCTAAAACCCTTGTAATTTCCAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| CDS-3UTR CAA 90 bp | CTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGCAAATACTTCTTTGCTCTTaGGGAGGCTTCTTTACGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LLQRIQMNNSHMKGYLGQILLCS*GGFFTG Trigger: ACCCGTAAAGAAGCCTCCCAAAGAGCAAAGAAGTAT...TTGCCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| CDS-3UTR CAA 90 bp | ACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTATCCAGGTTAGGGTCTGCAGCATaGTTCACTCAACACAAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TSNHDVVFVSSPHPELSRLGSAA*FTQHKN Trigger: GTTTTTGTGTTGAGTGAACAATGCTGCAGACCCTAA...CCTGGATAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| CDS-3UTR CAA 90 bp | ACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTATCCAGGCAGGTAGTTAAATATTaGGTGAGAGGAGGTGAATCT | + |
|
Preference number: 5 (lower is better) Translates to: TSNHDVVFVSSPHPELSRQVVKY*VRGGES Trigger: AGATTCACCTCCTCTCACCAAATATTTAACTACCTG...CCTGGATAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| CDS-3UTR CAA 90 bp | CTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGCAATCAGGTTCTTCAACTTaGATTGGTTCTTCAGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: LLQRIQMNNSHMKGYLGQSGSST*IGSSGS Trigger: TGATCCTGAAGAACCAATCAAAGTTGAAGAACCTGA...TTGCCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| CDS-3UTR CAA 90 bp | AGGCTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGTACGAAGGAACACCATaGAACTCATCACAAGTTATA | + |
|
Preference number: 5 (lower is better) Translates to: RLLQRIQMNNSHMKGYLGYEGTP*NSSQVI Trigger: TATAACTTGTGATGAGTTCAATGGTGTTCCTTCGTA...CCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| CDS-3UTR CAA 90 bp | CTACTACAAAGGATACAGATGAACAACAGCCACATGAAGGGGTACCTGGGGCAAATACTCTATACCCTGTaGGTATGTTCAAAAGTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LLQRIQMNNSHMKGYLGQILYTL*VCSKVH Trigger: GTGAACTTTTGAACATACCAACAGGGTATAGAGTAT...TTGCCCCAGGTACCCCTTCATGTGGCTGTTGTTCATCTGTATCCTTTGTAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| CDS-3UTR CAA 90 bp | AAGTTTACCTATAGACTGAAATGCCATCGATGGAATTTAGACACTAGTGATCTTGCTGAGGAGGGTGGATaGTTTGAGCTCAGGAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KFTYRLKCHRWNLDTSDLAEEGG*FELRSS Trigger: TGAGCTCCTGAGCTCAAACAATCCACCCTCCTCAGC...AAGATCACTAGTGTCTAAATTCCATCGATGGCATTTCAGTCTATAGGTAAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| CDS-3UTR CAA 90 bp | TTTGAAACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTATTCCTTAATACTTCTTaGCTCTTTGGGAGGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: FETSNHDVVFVSSPHPELFLNTS*LFGRLL Trigger: AAGAAGCCTCCCAAAGAGCAAAGAAGTATTAAGGAA...TAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGTTTCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| CDS TCA 90 bp | ACCTCTGATAGCCTCCGGCAGTGTCGTAAAATATTCAGTAACACGTaGAACTTCTTGTCAGCTTTCAAAGTTGTGAACTCCTTTATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TSDSLRQCRKIFSNT*NFLSAFKVVNSFMS Trigger: TGACATAAAGGAGTTCACAACTTTGAAAGCTGACAAGAAGTTTCACGTGTTACTGAATATTTTACGACACTGCCGGAGGCTATCAGAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000285116.8 ENST00000398452.6 ENST00000417656.6 ENST00000488454.5 ENST00000571751.5 ENST00000576078.2 ENST00000616604.2 ENST00000633940.1 |
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| CDS-3UTR CAA 90 bp | TTTGAAACTTCCAATCATGATGTGGTCTTTGTGAGCAGCCCCCATCCTGAGTTAATACTCTATACCCTGTaGGTATGTTCAAAAGTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: FETSNHDVVFVSSPHPELILYTL*VCSKVH Trigger: GTGAACTTTTGAACATACCAACAGGGTATAGAGTAT...TAACTCAGGATGGGGGCTGCTCACAAAGACCACATCATGATTGGAAGTTTCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| CDS-3UTR CAA 90 bp | ACTTTGGAAATTACAAGGGTTTTAGGAGCTCTGAACAAGGAACTAGATAGGAAGTCAGGTTCTTCAACTTaGATTGGTTCTTCAGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: TLEITRVLGALNKELDRKSGSST*IGSSGS Trigger: TGATCCTGAAGAACCAATCAAAGTTGAAGAACCTGA...CTTCCTATCTAGTTCCTTGTTCAGAGCTCCTAAAACCCTTGTAATTTCCAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| CDS-3UTR CAA 90 bp | ACTTTGGAAATTACAAGGGTTTTAGGAGCTCTGAACAAGGAACTAGATAGGAAGTTCCTTAATACTTCTTaGCTCTTTGGGAGGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TLEITRVLGALNKELDRKFLNTS*LFGRLL Trigger: AAGAAGCCTCCCAAAGAGCAAAGAAGTATTAAGGAA...CTTCCTATCTAGTTCCTTGTTCAGAGCTCCTAAAACCCTTGTAATTTCCAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
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| CDS-3UTR CAA 90 bp | ACTTTGGAAATTACAAGGGTTTTAGGAGCTCTGAACAAGGAACTAGATAGGAAGCAGGTAGTTAAATATTaGGTGAGAGGAGGTGAATCT | + |
|
Preference number: 5 (lower is better) Translates to: TLEITRVLGALNKELDRKQVVKY*VRGGES Trigger: AGATTCACCTCCTCTCACCAAATATTTAACTACCTG...CTTCCTATCTAGTTCCTTGTTCAGAGCTCCTAAAACCCTTGTAATTTCCAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS-3UTR CAA 90 bp | AAGTTTACCTATAGACTGAAATGCCATCGATGGAATTTAGACACTAGTGATCTTGATTCACAGAGTTCCTaGAGTGAATTGTTGGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: KFTYRLKCHRWNLDTSDLDSQSS*SELLVC Trigger: ACAAACCAACAATTCACTCAAGGAACTCTGTGAATC...AAGATCACTAGTGTCTAAATTCCATCGATGGCATTTCAGTCTATAGGTAAACTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000285116.8 ENST00000571751.5 |
||
| CDS GCA 72 bp | CGGGAGCAAAAGGCTACTCGCCGCTGGGTCTCCAGCTaGGGATACCGCAGTCTCCGTTGGAAGCCCAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: REQKATRRWVSS*GYRSLRWKPRM Trigger: CATCCTGGGCTTCCAACGGAGACTGCGGTATCCGCAGCTGGAGACCCAGCGGCGAGTAGCCTTTTGCTCCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000285116.8 ENST00000398452.6 ENST00000417656.6 ENST00000488454.5 ENST00000494518.1 ENST00000571318.5 ENST00000571751.5 ENST00000576078.2 ENST00000616604.2 ENST00000633940.1 |
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| CDS CCA 72 bp | CTCAAGTCCGTCCGGGAGCAAAAGGCTACTCGCCGCTaGGTCTCCAGCTGCGGATACCGCAGTCTCCGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LKSVREQKATRR*VSSCGYRSLRW Trigger: CCAACGGAGACTGCGGTATCCGCAGCTGGAGACCCAGCGGCGAGTAGCCTTTTGCTCCCGGACGGACTTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000285116.8 ENST00000398452.6 ENST00000417656.6 ENST00000488454.5 ENST00000494518.1 ENST00000571318.5 ENST00000571751.5 ENST00000576078.2 ENST00000616604.2 ENST00000633940.1 |
||
| CDS CCA 72 bp | CGCTGGGTCTCCAGCTGCGGATACCGCAGTCTCCGTTaGAAGCCCAGGATGGTGAGACGGGACTCTGTAAGC | + |
|
Preference number: 6 (lower is better) Translates to: RWVSSCGYRSLR*KPRMVRRDSVS Trigger: GCTTACAGAGTCCCGTCTCACCATCCTGGGCTTCCAACGGAGACTGCGGTATCCGCAGCTGGAGACCCAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000285116.8 ENST00000398452.6 ENST00000417656.6 ENST00000488454.5 ENST00000494518.1 ENST00000571318.5 ENST00000571751.5 ENST00000576078.2 ENST00000616604.2 ENST00000633940.1 |
||
| CDS CAA 90 bp | CTTTGCTCTTTGGGAGGCTTCTTTACGGGTTCAGGTTCTTCAACTTaGATTGGTTCTTCAGGATCAAGATCTGATCCCTTAACACAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LCSLGGFFTGSGSST*IGSSGSRSDPLTQL Trigger: GAGCTGTGTTAAGGGATCAGATCTTGATCCTGAAGAACCAATCAAAGTTGAAGAACCTGAACCCGTAAAGAAGCCTCCCAAAGAGCAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000285116.8 ENST00000398452.6 ENST00000494518.1 ENST00000571318.5 ENST00000571751.5 ENST00000616604.2 |
||
| CDS TCA 72 bp | AGCCTCCGGCAGTGTCGTAAAATATTCAGTAACACGTaGAACTTCTTGTCAGCTTTCAAAGTTGTGAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLRQCRKIFSNT*NFLSAFKVVNS Trigger: GGAGTTCACAACTTTGAAAGCTGACAAGAAGTTTCACGTGTTACTGAATATTTTACGACACTGCCGGAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000285116.8 ENST00000398452.6 ENST00000417656.6 ENST00000488454.5 ENST00000571751.5 ENST00000576078.2 ENST00000616604.2 ENST00000633940.1 |
||
| CDS CAA 72 bp | TTGGGAGGCTTCTTTACGGGTTCAGGTTCTTCAACTTaGATTGGTTCTTCAGGATCAAGATCTGATCCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: LGGFFTGSGSST*IGSSGSRSDPL Trigger: TAAGGGATCAGATCTTGATCCTGAAGAACCAATCAAAGTTGAAGAACCTGAACCCGTAAAGAAGCCTCCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000285116.8 ENST00000398452.6 ENST00000494518.1 ENST00000571318.5 ENST00000571751.5 ENST00000616604.2 |
||
| CDS TCA 72 bp | TTCTTCAACTTTGATTGGTTCTTCAGGATCAAGATCTaGTCCCTTAACACAGCTCTGGGTTACTGTTACTTG | + |
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Preference number: 6 (lower is better) Translates to: FFNFDWFFRIKI*SLNTALGYCYL Trigger: CAAGTAACAGTAACCCAGAGCTGTGTTAAGGGATCAGATCTTGATCCTGAAGAACCAATCAAAGTTGAAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000285116.8 ENST00000398452.6 ENST00000494518.1 ENST00000571318.5 ENST00000571751.5 ENST00000616604.2 |
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| CDS CAA 72 bp | GTTATAAATGGCATTTCCTTAATACTTCTTTGCTCTTaGGGAGGCTTCTTTACGGGTTCAGGTTCTTCAACT | + |
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Preference number: 6 (lower is better) Translates to: VINGISLILLCS*GGFFTGSGSST Trigger: AGTTGAAGAACCTGAACCCGTAAAGAAGCCTCCCAAAGAGCAAAGAAGTATTAAGGAAATGCCATTTATAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000285116.8 ENST00000398452.6 ENST00000494518.1 ENST00000571318.5 ENST00000571751.5 ENST00000616604.2 |
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| CDS CAA 90 bp | TCATCACAAGTTATAAATGGCATTTCCTTAATACTTCTTTGCTCTTaGGGAGGCTTCTTTACGGGTTCAGGTTCTTCAACTTTGATTGGT | + |
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Preference number: 6 (lower is better) Translates to: SSQVINGISLILLCS*GGFFTGSGSSTLIG Trigger: ACCAATCAAAGTTGAAGAACCTGAACCCGTAAAGAAGCCTCCCAAAGAGCAAAGAAGTATTAAGGAAATGCCATTTATAACTTGTGATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000285116.8 ENST00000398452.6 ENST00000494518.1 ENST00000571318.5 ENST00000571751.5 ENST00000616604.2 |
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| CDS CAA 90 bp | ATTGAACTCATCACAAGTTATAAATGGCATTTCCTTAATACTTCTTaGCTCTTTGGGAGGCTTCTTTACGGGTTCAGGTTCTTCAACTTT | + |
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Preference number: 6 (lower is better) Translates to: IELITSYKWHFLNTS*LFGRLLYGFRFFNF Trigger: AAAGTTGAAGAACCTGAACCCGTAAAGAAGCCTCCCAAAGAGCAAAGAAGTATTAAGGAAATGCCATTTATAACTTGTGATGAGTTCAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000285116.8 ENST00000398452.6 ENST00000494518.1 ENST00000571318.5 ENST00000571751.5 ENST00000616604.2 |
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