RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SIX5 (Homo sapiens)

Ensembl gene IDs: ENSG00000177045

Ensembl transcript IDs: ENST00000317578.7, ENST00000560160.1, ENST00000560168.1, ENST00000622857.1

Found 368 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCCCCGGCTCTCACCTAGGCCTGAGGGAGGGAGATGGGGGTACCTaGGGCAGTGGCCGAAGGCAGCTGCAGGGCAGTCACGCCCACCCC +
Preference number: 1 (lower is better)
Translates to: LPGSHLGLREGDGGT*GSGRRQLQGSHAHP
Trigger: GGGGTGGGCGTGACTGCCCTGCAGCTGCCTTCGGCCACTGCCCCAGGTACCCCCATCTCCCTCCCTCAGGCCTAGGTGAGAGCCGGGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR TCA 90 bp AGGGAGCCTTGTGGTGGGCCTTGGGGCACTGGGACTTGCCAGGGATaGGATGCCCTCCAGGAGCCCAGGGACAGCCCCTCCCTCTCCGAG +
Preference number: 1 (lower is better)
Translates to: REPCGGPWGTGTCQG*DALQEPRDSPSLSE
Trigger: CTCGGAGAGGGAGGGGCTGTCCCTGGGCTCCTGGAGGGCATCTCATCCCTGGCAAGTCCCAGTGCCCCAAGGCCCACCACAAGGCTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR CCA 90 bp GGCCAGGCCGTTGATGATGACGGGGCCCCCGTTGAGGAGCACTGCTaGGGAGCCGCTGGCTGCCAGGAAGCTCCCGTTCACCAGGATGGA +
Preference number: 1 (lower is better)
Translates to: GQAVDDDGAPVEEHC*GAAGCQEAPVHQDG
Trigger: TCCATCCTGGTGAACGGGAGCTTCCTGGCAGCCAGCGGCTCCCCAGCAGTGCTCCTCAACGGGGGCCCCGTCATCATCAACGGCCTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR CCA 90 bp CAGGGAGTGACAGGGAGAGGGCTCTGGGGGCTGGAAGTCCGGCCCTaGGGCAGGGTGTTCCGCTTACAGCTAGTACCAAGTGGAGGGGGC +
Preference number: 1 (lower is better)
Translates to: QGVTGRGLWGLEVRP*GRVFRLQLVPSGGG
Trigger: GCCCCCTCCACTTGGTACTAGCTGTAAGCGGAACACCCTGCCCCAGGGCCGGACTTCCAGCCCCCAGAGCCCTCTCCCTGTCACTCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
3UTR CCA 90 bp AGTGGAGACTGTGCAGCTGGAGGGCGGGCGGAGGGAGCCTTGTGGTaGGCCTTGGGGCACTGGGACTTGCCAGGGATGAGATGCCCTCCA +
Preference number: 1 (lower is better)
Translates to: SGDCAAGGRAEGALW*ALGHWDLPGMRCPP
Trigger: TGGAGGGCATCTCATCCCTGGCAAGTCCCAGTGCCCCAAGGCCCACCACAAGGCTCCCTCCGCCCGCCCTCCAGCTGCACAGTCTCCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR CCA 90 bp GCTGCAGGGCCACACCCGTCACGATGGGGCTGCCAGACACAGGGTTaGCCAGGAGGAAGTTTCCTGTGGGGAGAGAGGGACCGAGCGCAG +
Preference number: 1 (lower is better)
Translates to: AAGPHPSRWGCQTQG*PGGSFLWGERDRAQ
Trigger: CTGCGCTCGGTCCCTCTCTCCCCACAGGAAACTTCCTCCTGGCCAACCCTGTGTCTGGCAGCCCCATCGTGACGGGTGTGGCCCTGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR GCA 90 bp ACGAGCATGCTGGTGGGGAAGGTGGCGGTGAGGATGATCTTGCCCTaGTGCAGGGCCACACCCGTCACGATGGGGCTGCCAGACACAGGG +
Preference number: 1 (lower is better)
Translates to: TSMLVGKVAVRMILP*CRATPVTMGLPDTG
Trigger: CCCTGTGTCTGGCAGCCCCATCGTGACGGGTGTGGCCCTGCAGCAGGGCAAGATCATCCTCACCGCCACCTTCCCCACCAGCATGCTCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR CCA 90 bp AGAAGTGGAGACTGTGCAGCTGGAGGGCGGGCGGAGGGAGCCTTGTaGTGGGCCTTGGGGCACTGGGACTTGCCAGGGATGAGATGCCCT +
Preference number: 1 (lower is better)
Translates to: RSGDCAAGGRAEGAL*WALGHWDLPGMRCP
Trigger: AGGGCATCTCATCCCTGGCAAGTCCCAGTGCCCCAAGGCCCACCACAAGGCTCCCTCCGCCCGCCCTCCAGCTGCACAGTCTCCACTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR GCA 90 bp AGCATGCTGGTGGGGAAGGTGGCGGTGAGGATGATCTTGCCCTGCTaGAGGGCCACACCCGTCACGATGGGGCTGCCAGACACAGGGTTG +
Preference number: 1 (lower is better)
Translates to: SMLVGKVAVRMILPC*RATPVTMGLPDTGL
Trigger: CAACCCTGTGTCTGGCAGCCCCATCGTGACGGGTGTGGCCCTGCAGCAGGGCAAGATCATCCTCACCGCCACCTTCCCCACCAGCATGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR CCA 90 bp CCTGCGTCTTCAGCACCAATGTCGGGAGAGGCCACGGGGCCACACTaGGTCACAGTTCCAAGGGCTCCTCCACAGGCACCGACTGGAGCT +
Preference number: 1 (lower is better)
Translates to: PASSAPMSGEATGPH*VTVPRAPPQAPTGA
Trigger: AGCTCCAGTCGGTGCCTGTGGAGGAGCCCTTGGAACTGTGACCCAGTGTGGCCCCGTGGCCTCTCCCGACATTGGTGCTGAAGACGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560160.1
ENST00000560168.1
3UTR CCA 90 bp GCCACACTGGGTCACAGTTCCAAGGGCTCCTCCACAGGCACCGACTaGAGCTGGGTCAGAACCTTGGCCTCAGCTTCCAACCCCTCGTCA +
Preference number: 1 (lower is better)
Translates to: ATLGHSSKGSSTGTD*SWVRTLASASNPSS
Trigger: TGACGAGGGGTTGGAAGCTGAGGCCAAGGTTCTGACCCAGCTCCAGTCGGTGCCTGTGGAGGAGCCCTTGGAACTGTGACCCAGTGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560160.1
ENST00000560168.1
3UTR CCA 90 bp CTGGGTCACAGTTCCAAGGGCTCCTCCACAGGCACCGACTGGAGCTaGGTCAGAACCTTGGCCTCAGCTTCCAACCCCTCGTCAACCTCA +
Preference number: 1 (lower is better)
Translates to: LGHSSKGSSTGTDWS*VRTLASASNPSSTS
Trigger: TGAGGTTGACGAGGGGTTGGAAGCTGAGGCCAAGGTTCTGACCCAGCTCCAGTCGGTGCCTGTGGAGGAGCCCTTGGAACTGTGACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560160.1
ENST00000560168.1
3UTR CCA 90 bp GCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTaGGGGCTGGAAGTCCGGCCCTGGGGCAGGGTGTTCCGCTTACAG +
Preference number: 1 (lower is better)
Translates to: AELLIVFQGVTGRGL*GLEVRPWGRVFRLQ
Trigger: CTGTAAGCGGAACACCCTGCCCCAGGGCCGGACTTCCAGCCCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
3UTR TCA 90 bp GGGCGCGGGGCTGCCTGTCCTCCACCTTCGGATTCCAGGCAGTTGTaGCAACACCAGCTATCGGCAGAGCTATTAATAGTGTTTCAGGGA +
Preference number: 1 (lower is better)
Translates to: GRGAACPPPSDSRQL*QHQLSAELLIVFQG
Trigger: TCCCTGAAACACTATTAATAGCTCTGCCGATAGCTGGTGTTGTCACAACTGCCTGGAATCCGAAGGTGGAGGACAGGCAGCCCCGCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
3UTR-3UTR TCA 90 bp CCAAGGGCTGGTCCCGGAGCAGCCACCTGGGCCCCTTTGGTCTCAGGGGCCTCCGTCTCGCTGGCCCCCTaGGGGCTGGGCTGCGGTGGA +
Preference number: 2 (lower is better)
Translates to: PRAGPGAATWAPLVSGASVSLAP*GLGCGG
Trigger: TCCACCGCAGCCCAGCCCTCAGGGGGCCAGCGAGAC...GGAGGCCCCTGAGACCAAAGGGGCCCAGGTGGCTGCTCCGGGACCAGCCCTTGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR-3UTR GCA 90 bp CCAAGGGCTGGTCCCGGAGCAGCCACCTGGGCCCCTTTGGTCTCAGGGGCCTCCTGGGGAGCCGCTGGCTaGCAGGAAGCTCCCGTTCAC +
Preference number: 2 (lower is better)
Translates to: PRAGPGAATWAPLVSGASWGAAG*QEAPVH
Trigger: GTGAACGGGAGCTTCCTGGCAGCCAGCGGCTCCCCA...GGAGGCCCCTGAGACCAAAGGGGCCCAGGTGGCTGCTCCGGGACCAGCCCTTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR CAA 90 bp GACTGTGCAGCTGGAGGGCGGGCGGAGGGAGCCTTGTGGTGGGCCTaGGGGCACTGGGACTTGCCAGGGATGAGATGCCCTCCAGGAGCC +
Preference number: 2 (lower is better)
Translates to: DCAAGGRAEGALWWA*GHWDLPGMRCPPGA
Trigger: GGCTCCTGGAGGGCATCTCATCCCTGGCAAGTCCCAGTGCCCCAAGGCCCACCACAAGGCTCCCTCCGCCCGCCCTCCAGCTGCACAGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR-3UTR CCA 90 bp CGGGGCCACACTGGGTCACAGTTCCAAGGGCTCCTCCACAGGCACCGACTGGAGGAGGGCTCTGGGGGCTaGAAGTCCGGCCCTGGGGCA +
Preference number: 2 (lower is better)
Translates to: RGHTGSQFQGLLHRHRLEEGSGG*KSGPGA
Trigger: TGCCCCAGGGCCGGACTTCCAGCCCCCAGAGCCCTC...CTCCAGTCGGTGCCTGTGGAGGAGCCCTTGGAACTGTGACCCAGTGTGGCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560160.1
3UTR-3UTR CCA 90 bp GGGGGCCACCGGGAGGCCTCCCTCAGGCACGGAGATGGCCGTCTCTGGCTTCAGTCCCTGCCAGGAATATaGAGCCCTGGGCAGCGGCCT +
Preference number: 2 (lower is better)
Translates to: GGHREASLRHGDGRLWLQSLPGI*SPGQRP
Trigger: AGGCCGCTGCCCAGGGCTCCATATTCCTGGCAGGGA...CTGAAGCCAGAGACGGCCATCTCCGTGCCTGAGGGAGGCCTCCCGGTGGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR-3UTR CCA 90 bp GTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGACAGGCACGGCCGCGGGTGACAGCCTCAGCACGGTGTaGGGGGCCTGTGTCCCCAGC +
Preference number: 2 (lower is better)
Translates to: VPALSSSPADQTGTAAGDSLSTV*GACVPS
Trigger: GCTGGGGACACAGGCCCCCCACACCGTGCTGAGGCT...GTCACCCGCGGCCGTGCCTGTCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560160.1
ENST00000560168.1
3UTR-3UTR CCA 90 bp CCGCTTCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGAGGCCTCGGCGGACACTaGGGCCGCCCCTCTCTCCAG +
Preference number: 2 (lower is better)
Translates to: PLPAAPLFLRLVPALLTRGLGGH*GRPSLQ
Trigger: CTGGAGAGAGGGGCGGCCCCAGTGTCCGCCGAGGCC...TCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR-3UTR GCA 90 bp GCCACACTGGGTCACAGTTCCAAGGGCTCCTCCACAGGCACCGACTGGAGCTGGGTCAACCTCACCCCCTaGGGTGGCCCCCAGGAGCAG +
Preference number: 2 (lower is better)
Translates to: ATLGHSSKGSSTGTDWSWVNLTP*GGPQEQ
Trigger: CTGCTCCTGGGGGCCACCGCAGGGGGTGAGGTTGAC...CCAGCTCCAGTCGGTGCCTGTGGAGGAGCCCTTGGAACTGTGACCCAGTGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000560160.1
ENST00000560168.1
3UTR-3UTR GCA 90 bp GCTGCAGGGCCACACCCGTCACGATGGGGCTGCCAGACACAGGGTTGGCCAGGACCTCTCCGAGATGACTaGACCCCTCCCCGGCTCTCA +
Preference number: 2 (lower is better)
Translates to: AAGPHPSRWGCQTQGWPGPLRDD*TPPRLS
Trigger: TGAGAGCCGGGGAGGGGTGCAGTCATCTCGGAGAGG...TCCTGGCCAACCCTGTGTCTGGCAGCCCCATCGTGACGGGTGTGGCCCTGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR-3UTR CCA 90 bp GTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGACAGGCACGGCCGCGGGTGACAGGGGGATGGAGACCTaGACAGGAGGTGGCCGGGGA +
Preference number: 2 (lower is better)
Translates to: VPALSSSPADQTGTAAGDRGMET*TGGGRG
Trigger: TCCCCGGCCACCTCCTGTCCAGGTCTCCATCCCCCT...GTCACCCGCGGCCGTGCCTGTCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560160.1
3UTR-3UTR CCA 90 bp GCCACACTGGGTCACAGTTCCAAGGGCTCCTCCACAGGCACCGACTGGAGCTGGAGCCTCAGCACGGTGTaGGGGGCCTGTGTCCCCAGC +
Preference number: 2 (lower is better)
Translates to: ATLGHSSKGSSTGTDWSWSLSTV*GACVPS
Trigger: GCTGGGGACACAGGCCCCCCACACCGTGCTGAGGCT...CCAGCTCCAGTCGGTGCCTGTGGAGGAGCCCTTGGAACTGTGACCCAGTGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560160.1
ENST00000560168.1
3UTR CAA 90 bp TGCTGCAGGGCCACACCCGTCACGATGGGGCTGCCAGACACAGGGTaGGCCAGGAGGAAGTTTCCTGTGGGGAGAGAGGGACCGAGCGCA +
Preference number: 2 (lower is better)
Translates to: CCRATPVTMGLPDTG*ARRKFPVGREGPSA
Trigger: TGCGCTCGGTCCCTCTCTCCCCACAGGAAACTTCCTCCTGGCCAACCCTGTGTCTGGCAGCCCCATCGTGACGGGTGTGGCCCTGCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR CAA 90 bp TGGGAGACGAGCATGCTGGTGGGGAAGGTGGCGGTGAGGATGATCTaGCCCTGCTGCAGGGCCACACCCGTCACGATGGGGCTGCCAGAC +
Preference number: 2 (lower is better)
Translates to: WETSMLVGKVAVRMI*PCCRATPVTMGLPD
Trigger: GTCTGGCAGCCCCATCGTGACGGGTGTGGCCCTGCAGCAGGGCAAGATCATCCTCACCGCCACCTTCCCCACCAGCATGCTCGTCTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR-3UTR TCA 90 bp TCCGCTTCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGAGGGTGCCTAGGGCGTaGGCCTCTGGGAGAGCAGGG +
Preference number: 2 (lower is better)
Translates to: SASSSPSVPALSSSPADQRVPRA*ASGRAG
Trigger: CCCTGCTCTCCCAGAGGCTCACGCCCTAGGCACCCT...CTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAGCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560160.1
ENST00000560168.1
3UTR-3UTR TCA 90 bp CCGCTTCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGAAGGCACGGCCGCGGGTaGCAACATCAGCCCCTCTGG +
Preference number: 2 (lower is better)
Translates to: PLPAAPLFLRLVPALLTRRHGRG*QHQPLW
Trigger: CCAGAGGGGCTGATGTTGTCACCCGCGGCCGTGCCT...TCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560160.1
ENST00000560168.1
3UTR-3UTR GCA 90 bp GTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGACAGGCACGGCCGCGGGTGACCCGTCACGATGGGGCTaGCAGACACAGGGTTGGCCA +
Preference number: 2 (lower is better)
Translates to: VPALSSSPADQTGTAAGDPSRWG*QTQGWP
Trigger: TGGCCAACCCTGTGTCTGGCAGCCCCATCGTGACGG...GTCACCCGCGGCCGTGCCTGTCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR-3UTR CCA 90 bp TCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGACAGGCACAGGGAGAGGGCTCTaGGGGCTGGAAGTCCGGCCC +
Preference number: 2 (lower is better)
Translates to: SSSPSVPALSSSPADQTGTGRGL*GLEVRP
Trigger: GGGCCGGACTTCCAGCCCCCAGAGCCCTCTCCCTGT...GCCTGTCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560160.1
3UTR-3UTR CCA 90 bp CTGGAGCTGGGTCAGAACCTTGGCCTCAGCTTCCAACCCCTCGTCAACCTCACCGGGGCGCCGGGAAGTTaGGCAGGAGGCCAGGGGAGT +
Preference number: 2 (lower is better)
Translates to: LELGQNLGLSFQPLVNLTGAPGS*AGGQGS
Trigger: ACTCCCCTGGCCTCCTGCCCAACTTCCCGGCGCCCC...GGTGAGGTTGACGAGGGGTTGGAAGCTGAGGCCAAGGTTCTGACCCAGCTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000560160.1
ENST00000560168.1
3UTR-3UTR CCA 90 bp CGGGGCCACACTGGGTCACAGTTCCAAGGGCTCCTCCACAGGCACCGACTGGAGCAACATCAGCCCCTCTaGTGGGGGCGCCGGGAAGTT +
Preference number: 2 (lower is better)
Translates to: RGHTGSQFQGLLHRHRLEQHQPL*WGRREV
Trigger: AACTTCCCGGCGCCCCCACCAGAGGGGCTGATGTTG...CTCCAGTCGGTGCCTGTGGAGGAGCCCTTGGAACTGTGACCCAGTGTGGCCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000560160.1
ENST00000560168.1
3UTR-3UTR CCA 90 bp GTCAGGACCCTGAGTCCCCCACGTATATGGCAGGGCACAGCATGGGGAGGGCTGCTCAGGGTCGGGGTCTaGCAGCCTCAGCACGGTGTG +
Preference number: 2 (lower is better)
Translates to: VRTLSPPRIWQGTAWGGLLRVGV*QPQHGV
Trigger: CACACCGTGCTGAGGCTGCCAGACCCCGACCCTGAG...CAGCCCTCCCCATGCTGTGCCCTGCCATATACGTGGGGGACTCAGGGTCCTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560160.1
3UTR-3UTR CCA 90 bp GCCACACTGGGTCACAGTTCCAAGGGCTCCTCCACAGGCACCGACTGGAGCTGGCTCAGGGTCGGGGTCTaGCAGCCTCAGCACGGTGTG +
Preference number: 2 (lower is better)
Translates to: ATLGHSSKGSSTGTDWSWLRVGV*QPQHGV
Trigger: CACACCGTGCTGAGGCTGCCAGACCCCGACCCTGAG...CCAGCTCCAGTCGGTGCCTGTGGAGGAGCCCTTGGAACTGTGACCCAGTGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560160.1
ENST00000560168.1
3UTR-3UTR CCA 90 bp GCTGCAGGGCCACACCCGTCACGATGGGGCTGCCAGACACAGGGTTGGCCAGGATGGGCCTTGGGGCACTaGGACTTGCCAGGGATGAGA +
Preference number: 2 (lower is better)
Translates to: AAGPHPSRWGCQTQGWPGWALGH*DLPGMR
Trigger: TCTCATCCCTGGCAAGTCCCAGTGCCCCAAGGCCCA...TCCTGGCCAACCCTGTGTCTGGCAGCCCCATCGTGACGGGTGTGGCCCTGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR-3UTR TCA 90 bp GTCAGGACCCTGAGTCCCCCACGTATATGGCAGGGCACAGCATGGGGAGGGCTGGGCTGCCCCCAGGGATaGGGGAATCTTTGGTCTGGG +
Preference number: 2 (lower is better)
Translates to: VRTLSPPRIWQGTAWGGLGCPQG*GNLWSG
Trigger: CCCAGACCAAAGATTCCCTCATCCCTGGGGGCAGCC...CAGCCCTCCCCATGCTGTGCCCTGCCATATACGTGGGGGACTCAGGGTCCTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000622857.1
3UTR-3UTR GCA 90 bp GTCAGGACCCTGAGTCCCCCACGTATATGGCAGGGCACAGCATGGGGAGGGCTGGCCCCTGGCAGGAAATaGCACACTGGGGAGGGTCTC +
Preference number: 2 (lower is better)
Translates to: VRTLSPPRIWQGTAWGGLAPGRK*HTGEGL
Trigger: GAGACCCTCCCCAGTGTGGCATTTCCTGCCAGGGGC...CAGCCCTCCCCATGCTGTGCCCTGCCATATACGTGGGGGACTCAGGGTCCTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
3UTR-3UTR GCA 90 bp CCGCTTCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGAGGGAGGGCCGGTCCCTaGCAGGAATATGGAGCCCTG +
Preference number: 2 (lower is better)
Translates to: PLPAAPLFLRLVPALLTRGRAGP*QEYGAL
Trigger: CAGGGCTCCATATTCCTGGCAGGGACCGGCCCTCCC...TCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR-3UTR CCA 90 bp GGCAGGGTGTTCCGCTTACAGCTAGTACCAAGTGGAGGGGGCAGGGCCCCTGAGGACCTGGACAGGAGGTaGCCGGGGATACAACCCCCA +
Preference number: 2 (lower is better)
Translates to: GRVFRLQLVPSGGGRAPEDLDRR*PGIQPP
Trigger: TGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGTC...CTCAGGGGCCCTGCCCCCTCCACTTGGTACTAGCTGTAAGCGGAACACCCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
3UTR-3UTR CCA 90 bp CCGCTTCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGAAGGAATATGGAGCCCTaGGCAGCGGCCTCGGCGGAC +
Preference number: 2 (lower is better)
Translates to: PLPAAPLFLRLVPALLTRRNMEP*AAASAD
Trigger: GTCCGCCGAGGCCGCTGCCCAGGGCTCCATATTCCT...TCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR-3UTR GCA 90 bp AGGGCTGCCCCCAGGGATGAGGGAATCTTTGGTCTGGGCCGGATAATGAGGACATCAGGGGCGCGGGGCTaGCTGTCCTCCACCTTCGGA +
Preference number: 2 (lower is better)
Translates to: RAAPRDEGIFGLGRIMRTSGARG*LSSTFG
Trigger: TCCGAAGGTGGAGGACAGGCAGCCCCGCGCCCCTGA...TGTCCTCATTATCCGGCCCAGACCAAAGATTCCCTCATCCCTGGGGGCAGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000622857.1
3UTR-3UTR GCA 90 bp TCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGACAGGCGCCCCTGGCAGGAAATaGCACACTGGGGAGGGTCTC +
Preference number: 2 (lower is better)
Translates to: SSSPSVPALSSSPADQTGAPGRK*HTGEGL
Trigger: GAGACCCTCCCCAGTGTGGCATTTCCTGCCAGGGGC...GCCTGTCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560160.1
3UTR-3UTR CCA 90 bp CACGATGGGGCTGCCAGACACAGGGTTGGCCAGGAGGAAGTTTCCTGTGGGGAGGGACCAGAGAGGTCTTaGTCTCGCTGGCCCCCTGAG +
Preference number: 2 (lower is better)
Translates to: HDGAARHRVGQEEVSCGEGPERS*SRWPPE
Trigger: CTCAGGGGGCCAGCGAGACCAAGACCTCTCTGGTCC...CTCCCCACAGGAAACTTCCTCCTGGCCAACCCTGTGTCTGGCAGCCCCATCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR-3UTR CCA 90 bp GAAGGCAGCTGCAGGGCAGTCACGCCCACCCCGGAGTTGATGAGGTGCACATTGGAGCGGTACCACTTGTaGGGCAGCCACAGCAGGCAC +
Preference number: 2 (lower is better)
Translates to: EGSCRAVTPTPELMRCTLERYHL*GSHSRH
Trigger: GTGCCTGCTGTGGCTGCCCCACAAGTGGTACCGCTC...CAATGTGCACCTCATCAACTCCGGGGTGGGCGTGACTGCCCTGCAGCTGCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR-3UTR CCA 90 bp GCCACACTGGGTCACAGTTCCAAGGGCTCCTCCACAGGCACCGACTGGAGCTGGCCATCCAAAGGGGGATaGAGACCTGGACAGGAGGTG +
Preference number: 2 (lower is better)
Translates to: ATLGHSSKGSSTGTDWSWPSKGG*RPGQEV
Trigger: CACCTCCTGTCCAGGTCTCCATCCCCCTTTGGATGG...CCAGCTCCAGTCGGTGCCTGTGGAGGAGCCCTTGGAACTGTGACCCAGTGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560160.1
3UTR-3UTR CCA 90 bp GGCAGGGTGTTCCGCTTACAGCTAGTACCAAGTGGAGGGGGCAGGGCCCCTGAGAGTCCCCCACGTATATaGCAGGGCACAGCATGGGGA +
Preference number: 2 (lower is better)
Translates to: GRVFRLQLVPSGGGRAPESPPRI*QGTAWG
Trigger: TCCCCATGCTGTGCCCTGCCATATACGTGGGGGACT...CTCAGGGGCCCTGCCCCCTCCACTTGGTACTAGCTGTAAGCGGAACACCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
3UTR-3UTR CCA 90 bp GACCCTGAGTCCCCCACGTATATGGCAGGGCACAGCATGGGGAGGGCTGTAACACTGGAAGTCCGGCCCTaGGGCAGGGTGTTCCGCTTA +
Preference number: 2 (lower is better)
Translates to: DPESPTYMAGHSMGRAVTLEVRP*GRVFRL
Trigger: TAAGCGGAACACCCTGCCCCAGGGCCGGACTTCCAG...TGTTACAGCCCTCCCCATGCTGTGCCCTGCCATATACGTGGGGGACTCAGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
3UTR-3UTR CCA 90 bp GTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGACAGGCACGGCCGCGGGTGACCAGGAAATGCCACACTaGGGAGGGTCTCCAGTCTCA +
Preference number: 2 (lower is better)
Translates to: VPALSSSPADQTGTAAGDQEMPH*GGSPVS
Trigger: TGAGACTGGAGACCCTCCCCAGTGTGGCATTTCCTG...GTCACCCGCGGCCGTGCCTGTCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560160.1
3UTR-3UTR CCA 90 bp CACGATGGGGCTGCCAGACACAGGGTTGGCCAGGAGGAAGTTTCCTGTGGGGAGGGCACCGACTGGAGCTaGGTCAGAACCTTGGCCTCA +
Preference number: 2 (lower is better)
Translates to: HDGAARHRVGQEEVSCGEGTDWS*VRTLAS
Trigger: TGAGGCCAAGGTTCTGACCCAGCTCCAGTCGGTGCC...CTCCCCACAGGAAACTTCCTCCTGGCCAACCCTGTGTCTGGCAGCCCCATCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR-3UTR CCA 90 bp TCCGCTTCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGTCCCGTTCACCAGGATaGAGGAGGAAGCCGGGCAAG +
Preference number: 2 (lower is better)
Translates to: SASSSPSVPALSSSPADQSRSPG*RRKPGK
Trigger: CTTGCCCGGCTTCCTCCTCCATCCTGGTGAACGGGA...CTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAGCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR-3UTR CCA 90 bp TGGGGCAGGGTCACCACCTGTGAGGTGGGTACTACCTGGGGCAGGTTCAATAGTCTCCTCTCCAAGGGCTaGTCCCGGAGCAGCCACCTG +
Preference number: 2 (lower is better)
Translates to: WGRVTTCEVGTTWGRFNSLLSKG*SRSSHL
Trigger: CAGGTGGCTGCTCCGGGACCAGCCCTTGGAGAGGAG...ACTATTGAACCTGCCCCAGGTAGTACCCACCTCACAGGTGGTGACCCTGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR-3UTR TCA 90 bp GAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGGCTGGAAAGGGTGCCTAGGGCGTaGGCCTCTGGGAGAGCAGGG +
Preference number: 2 (lower is better)
Translates to: ELLIVFQGVTGRGLWGLERVPRA*ASGRAG
Trigger: CCCTGCTCTCCCAGAGGCTCACGCCCTAGGCACCCT...TTCCAGCCCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560160.1
3UTR-3UTR TCA 90 bp GAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGGCTGGAAAGGCACGGCCGCGGGTaGCAACATCAGCCCCTCTGG +
Preference number: 2 (lower is better)
Translates to: ELLIVFQGVTGRGLWGLERHGRG*QHQPLW
Trigger: CCAGAGGGGCTGATGTTGTCACCCGCGGCCGTGCCT...TTCCAGCCCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560160.1
3UTR-3UTR CCA 90 bp GGCGCGGGGCTGCCTGTCCTCCACCTTCGGATTCCAGGCAGTTGTGACAACACCGAAGGATGTGGTGACTaGGGTCTTCAGCAACCGCAT +
Preference number: 2 (lower is better)
Translates to: GAGLPVLHLRIPGSCDNTEGCGD*GLQQPH
Trigger: ATGCGGTTGCTGAAGACCCCAGTCACCACATCCTTC...GGTGTTGTCACAACTGCCTGGAATCCGAAGGTGGAGGACAGGCAGCCCCGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
3UTR-3UTR CCA 90 bp CTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGGGCGCCGGGAAGTTaGGCAGGAGGCCAGGGGAGT +
Preference number: 2 (lower is better)
Translates to: LSAELLIVFQGVTGRGLWGAPGS*AGGQGS
Trigger: ACTCCCCTGGCCTCCTGCCCAACTTCCCGGCGCCCC...CCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000560160.1
3UTR-3UTR CCA 90 bp GAAGGCAGCTGCAGGGCAGTCACGCCCACCCCGGAGTTGATGAGGTGCACATTGGAGGTGGGTACTACCTaGGGCAGGTTCAATAGTGGG +
Preference number: 2 (lower is better)
Translates to: EGSCRAVTPTPELMRCTLEVGTT*GRFNSG
Trigger: CCCACTATTGAACCTGCCCCAGGTAGTACCCACCTC...CAATGTGCACCTCATCAACTCCGGGGTGGGCGTGACTGCCCTGCAGCTGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR-3UTR GCA 90 bp GCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGTCAGGGGCGCGGGGCTaGCTGTCCTCCACCTTCGGA +
Preference number: 2 (lower is better)
Translates to: AIGRAINSVSGSDRERALSGARG*LSSTFG
Trigger: TCCGAAGGTGGAGGACAGGCAGCCCCGCGCCCCTGA...CAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
3UTR-3UTR GCA 90 bp CCTGTCCTCCACCTTCGGATTCCAGGCAGTTGTGACAACACCAGCTATCGGCAGGCTGTGCAGAAAGGGTaGCTAGGGCGTGAGCCTCTG +
Preference number: 2 (lower is better)
Translates to: PVLHLRIPGSCDNTSYRQAVQKG*LGREPL
Trigger: CAGAGGCTCACGCCCTAGGCACCCTTTCTGCACAGC...CTGCCGATAGCTGGTGTTGTCACAACTGCCTGGAATCCGAAGGTGGAGGACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560160.1
3UTR-3UTR CCA 90 bp TCCTCCACCTTCGGATTCCAGGCAGTTGTGACAACACCAGCTATCGGCAGAGCTAGCACCACCAGGGCTTaGAGAGGCCACCCAGGCAGA +
Preference number: 2 (lower is better)
Translates to: SSTFGFQAVVTTPAIGRASTTRA*RGHPGR
Trigger: TCTGCCTGGGTGGCCTCTCCAAGCCCTGGTGGTGCT...AGCTCTGCCGATAGCTGGTGTTGTCACAACTGCCTGGAATCCGAAGGTGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
3UTR-3UTR CCA 90 bp ATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGAGGGGGATGGAGACCTaGACAGGAGGTGGCCGGGGA +
Preference number: 2 (lower is better)
Translates to: IGRAINSVSGSDRERALGRGMET*TGGGRG
Trigger: TCCCCGGCCACCTCCTGTCCAGGTCTCCATCCCCCT...CCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
3UTR-3UTR CCA 90 bp CCAGCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTACAGGGAGAGGGCTCTaGGGGCTGGAAGTCCGGCCC +
Preference number: 2 (lower is better)
Translates to: PAIGRAINSVSGSDRERATGRGL*GLEVRP
Trigger: GGGCCGGACTTCCAGCCCCCAGAGCCCTCTCCCTGT...AGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
3UTR-3UTR TCA 90 bp TCCTCCACCTTCGGATTCCAGGCAGTTGTGACAACACCAGCTATCGGCAGAGCTCCTGAGTCAGGACCCTaGGTCCCCCACGTATATGGC +
Preference number: 2 (lower is better)
Translates to: SSTFGFQAVVTTPAIGRAPESGP*VPHVYG
Trigger: GCCATATACGTGGGGGACTCAGGGTCCTGACTCAGG...AGCTCTGCCGATAGCTGGTGTTGTCACAACTGCCTGGAATCCGAAGGTGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
3UTR-3UTR TCA 90 bp GCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGTCGAGGGGAGCTGGTaGAGGAAGACCCCCGTCTCC +
Preference number: 2 (lower is better)
Translates to: AIGRAINSVSGSDRERALVEGSW*RKTPVS
Trigger: GGAGACGGGGGTCTTCCTTCACCAGCTCCCCTCGAC...CAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
3UTR-3UTR CCA 90 bp CTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGAGGGGGATGGAGACCTaGACAGGAGGTGGCCGGGGA +
Preference number: 2 (lower is better)
Translates to: LSAELLIVFQGVTGRGLWRGMET*TGGGRG
Trigger: TCCCCGGCCACCTCCTGTCCAGGTCTCCATCCCCCT...CCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
3UTR-3UTR CCA 90 bp ACCTTCGGATTCCAGGCAGTTGTGACAACACCAGCTATCGGCAGAGCTATTAATGAGGGCTCTGGGGGCTaGAAGTCCGGCCCTGGGGCA +
Preference number: 2 (lower is better)
Translates to: TFGFQAVVTTPAIGRAINEGSGG*KSGPGA
Trigger: TGCCCCAGGGCCGGACTTCCAGCCCCCAGAGCCCTC...ATTAATAGCTCTGCCGATAGCTGGTGTTGTCACAACTGCCTGGAATCCGAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
3UTR-3UTR TCA 90 bp TCCTCCACCTTCGGATTCCAGGCAGTTGTGACAACACCAGCTATCGGCAGAGCTGGCAGAAGGATGTGGTaGCTGGGGTCTTCAGCAACC +
Preference number: 2 (lower is better)
Translates to: SSTFGFQAVVTTPAIGRAGRRMW*LGSSAT
Trigger: GGTTGCTGAAGACCCCAGTCACCACATCCTTCTGCC...AGCTCTGCCGATAGCTGGTGTTGTCACAACTGCCTGGAATCCGAAGGTGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
3UTR-3UTR CCA 90 bp CCAGCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTAGCACCACCAGGGCTTaGAGAGGCCACCCAGGCAGA +
Preference number: 2 (lower is better)
Translates to: PAIGRAINSVSGSDRERASTTRA*RGHPGR
Trigger: TCTGCCTGGGTGGCCTCTCCAAGCCCTGGTGGTGCT...AGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
3UTR-3UTR CCA 90 bp GCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGCTGGAAGTCCGGCCCTaGGGCAGGGTGTTCCGCTTA +
Preference number: 2 (lower is better)
Translates to: AIGRAINSVSGSDRERALLEVRP*GRVFRL
Trigger: TAAGCGGAACACCCTGCCCCAGGGCCGGACTTCCAG...CAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
3UTR-3UTR TCA 90 bp ATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGGGCAGAAGGATGTGGTaGCTGGGGTCTTCAGCAACC +
Preference number: 2 (lower is better)
Translates to: IGRAINSVSGSDRERALGGRRMW*LGSSAT
Trigger: GGTTGCTGAAGACCCCAGTCACCACATCCTTCTGCC...CCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGAT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
3UTR-3UTR CCA 90 bp GAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGGCTGGAACCATCCAAAGGGGGATaGAGACCTGGACAGGAGGTG +
Preference number: 2 (lower is better)
Translates to: ELLIVFQGVTGRGLWGLEPSKGG*RPGQEV
Trigger: CACCTCCTGTCCAGGTCTCCATCCCCCTTTGGATGG...TTCCAGCCCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
3UTR-3UTR CCA 90 bp GCAGTTGTGACAACACCAGCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTCATCAGCCCCTCTGGTaGGGGCGCCGGGAAGTTGGG +
Preference number: 2 (lower is better)
Translates to: AVVTTPAIGRAINSVSGSHQPLW*GRREVG
Trigger: CCCAACTTCCCGGCGCCCCCACCAGAGGGGCTGATG...ACTCCCTGAAACACTATTAATAGCTCTGCCGATAGCTGGTGTTGTCACAACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560160.1
3UTR-3UTR CCA 90 bp GCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGCACCGACTGGAGCTaGGTCAGAACCTTGGCCTCA +
Preference number: 2 (lower is better)
Translates to: AIGRAINSVSGSDRERALGTDWS*VRTLAS
Trigger: TGAGGCCAAGGTTCTGACCCAGCTCCAGTCGGTGCC...CAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560160.1
3UTR-3UTR TCA 90 bp CTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGCAGAAGGATGTGGTaGCTGGGGTCTTCAGCAACC +
Preference number: 2 (lower is better)
Translates to: LSAELLIVFQGVTGRGLWGRRMW*LGSSAT
Trigger: GGTTGCTGAAGACCCCAGTCACCACATCCTTCTGCC...CCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
3UTR-3UTR TCA 90 bp GCAGTTGTGACAACACCAGCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGTCGAGGGGAGCTGGTaGAGGAAGACCCCCGTCTCC +
Preference number: 2 (lower is better)
Translates to: AVVTTPAIGRAINSVSGSVEGSW*RKTPVS
Trigger: GGAGACGGGGGTCTTCCTTCACCAGCTCCCCTCGAC...ACTCCCTGAAACACTATTAATAGCTCTGCCGATAGCTGGTGTTGTCACAACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
3UTR-3UTR CCA 90 bp GAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGGCTGGAACAGGAAATGCCACACTaGGGAGGGTCTCCAGTCTCA +
Preference number: 2 (lower is better)
Translates to: ELLIVFQGVTGRGLWGLEQEMPH*GGSPVS
Trigger: TGAGACTGGAGACCCTCCCCAGTGTGGCATTTCCTG...TTCCAGCCCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
3UTR-3UTR TCA 90 bp GTTGTGACAACACCAGCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACGGCTGCCCCCAGGGATaGGGGAATCTTTGGTCTGGG +
Preference number: 2 (lower is better)
Translates to: VVTTPAIGRAINSVSGSDGCPQG*GNLWSG
Trigger: CCCAGACCAAAGATTCCCTCATCCCTGGGGGCAGCC...GTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAGCTGGTGTTGTCACAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000622857.1
3UTR-3UTR TCA 90 bp GCAGTTGTGACAACACCAGCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTCCTGAGTCAGGACCCTaGGTCCCCCACGTATATGGC +
Preference number: 2 (lower is better)
Translates to: AVVTTPAIGRAINSVSGSPESGP*VPHVYG
Trigger: GCCATATACGTGGGGGACTCAGGGTCCTGACTCAGG...ACTCCCTGAAACACTATTAATAGCTCTGCCGATAGCTGGTGTTGTCACAACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
3UTR-3UTR TCA 90 bp GCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGATTCCAGGCAGTTGTaGCAACACCAGCTATCGGCA +
Preference number: 2 (lower is better)
Translates to: AIGRAINSVSGSDRERALDSRQL*QHQLSA
Trigger: TGCCGATAGCTGGTGTTGTCACAACTGCCTGGAATC...CAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
3UTR-3UTR CCA 90 bp ACCTTCGGATTCCAGGCAGTTGTGACAACACCAGCTATCGGCAGAGCTATTAATAGTCCCCCACGTATATaGCAGGGCACAGCATGGGGA +
Preference number: 2 (lower is better)
Translates to: TFGFQAVVTTPAIGRAINSPPRI*QGTAWG
Trigger: TCCCCATGCTGTGCCCTGCCATATACGTGGGGGACT...ATTAATAGCTCTGCCGATAGCTGGTGTTGTCACAACTGCCTGGAATCCGAAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
3UTR-3UTR CCA 90 bp GCAGTTGTGACAACACCAGCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGAAGGATGTGGTGACTaGGGTCTTCAGCAACCGCAT +
Preference number: 2 (lower is better)
Translates to: AVVTTPAIGRAINSVSGSEGCGD*GLQQPH
Trigger: ATGCGGTTGCTGAAGACCCCAGTCACCACATCCTTC...ACTCCCTGAAACACTATTAATAGCTCTGCCGATAGCTGGTGTTGTCACAACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
3UTR TCA 72 bp TGTGGTGGGCCTTGGGGCACTGGGACTTGCCAGGGATaGGATGCCCTCCAGGAGCCCAGGGACAGCCCCTCC +
Preference number: 3 (lower is better)
Translates to: CGGPWGTGTCQG*DALQEPRDSPS
Trigger: GGAGGGGCTGTCCCTGGGCTCCTGGAGGGCATCTCATCCCTGGCAAGTCCCAGTGCCCCAAGGCCCACCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR-3UTR CAA 90 bp CACGATGGGGCTGCCAGACACAGGGTTGGCCAGGAGGAAGTTTCCTGTGGGGAGGCCACCTGGGCCCCTTaGGTCTCAGGGGCCTCCGAC +
Preference number: 3 (lower is better)
Translates to: HDGAARHRVGQEEVSCGEATWAP*VSGASD
Trigger: GTCGGAGGCCCCTGAGACCAAAGGGGCCCAGGTGGC...CTCCCCACAGGAAACTTCCTCCTGGCCAACCCTGTGTCTGGCAGCCCCATCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR GCA 72 bp GTGGGGAAGGTGGCGGTGAGGATGATCTTGCCCTGCTaGAGGGCCACACCCGTCACGATGGGGCTGCCAGAC +
Preference number: 3 (lower is better)
Translates to: VGKVAVRMILPC*RATPVTMGLPD
Trigger: GTCTGGCAGCCCCATCGTGACGGGTGTGGCCCTGCAGCAGGGCAAGATCATCCTCACCGCCACCTTCCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR GCA 72 bp CTGGTGGGGAAGGTGGCGGTGAGGATGATCTTGCCCTaGTGCAGGGCCACACCCGTCACGATGGGGCTGCCA +
Preference number: 3 (lower is better)
Translates to: LVGKVAVRMILP*CRATPVTMGLP
Trigger: TGGCAGCCCCATCGTGACGGGTGTGGCCCTGCAGCAGGGCAAGATCATCCTCACCGCCACCTTCCCCACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR GCA 72 bp TGCAGGGCAGTCACGCCCACCCCGGAGTTGATGAGGTaGACATTGGCAGGGCCTGCTGCAGCTGCCACCTTC +
Preference number: 3 (lower is better)
Translates to: CRAVTPTPELMR*TLAGPAAAATF
Trigger: GAAGGTGGCAGCTGCAGCAGGCCCTGCCAATGTGCACCTCATCAACTCCGGGGTGGGCGTGACTGCCCTGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR GCA 72 bp TGCCCTGCTGCAGGGCCACACCCGTCACGATGGGGCTaGCAGACACAGGGTTGGCCAGGAGGAAGTTTCCTG +
Preference number: 3 (lower is better)
Translates to: CPAAGPHPSRWG*QTQGWPGGSFL
Trigger: CAGGAAACTTCCTCCTGGCCAACCCTGTGTCTGGCAGCCCCATCGTGACGGGTGTGGCCCTGCAGCAGGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR CCA 72 bp TCAGCACCAATGTCGGGAGAGGCCACGGGGCCACACTaGGTCACAGTTCCAAGGGCTCCTCCACAGGCACCG +
Preference number: 3 (lower is better)
Translates to: SAPMSGEATGPH*VTVPRAPPQAP
Trigger: CGGTGCCTGTGGAGGAGCCCTTGGAACTGTGACCCAGTGTGGCCCCGTGGCCTCTCCCGACATTGGTGCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560160.1
ENST00000560168.1
3UTR-3UTR CAA 90 bp TCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGACAGGCGCCTTGTGGTGGGCCTaGGGGCACTGGGACTTGCCA +
Preference number: 3 (lower is better)
Translates to: SSSPSVPALSSSPADQTGALWWA*GHWDLP
Trigger: TGGCAAGTCCCAGTGCCCCAAGGCCCACCACAAGGC...GCCTGTCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR CCA 72 bp CCTCCACAGGCACCGACTGGAGCTGGGTCAGAACCTTaGCCTCAGCTTCCAACCCCTCGTCAACCTCACCCC +
Preference number: 3 (lower is better)
Translates to: PPQAPTGAGSEP*PQLPTPRQPHP
Trigger: GGGGTGAGGTTGACGAGGGGTTGGAAGCTGAGGCCAAGGTTCTGACCCAGCTCCAGTCGGTGCCTGTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560160.1
ENST00000560168.1
3UTR CCA 72 bp CCACACCCGTCACGATGGGGCTGCCAGACACAGGGTTaGCCAGGAGGAAGTTTCCTGTGGGGAGAGAGGGAC +
Preference number: 3 (lower is better)
Translates to: PHPSRWGCQTQG*PGGSFLWGERD
Trigger: GTCCCTCTCTCCCCACAGGAAACTTCCTCCTGGCCAACCCTGTGTCTGGCAGCCCCATCGTGACGGGTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR CCA 72 bp AGTTCCAAGGGCTCCTCCACAGGCACCGACTGGAGCTaGGTCAGAACCTTGGCCTCAGCTTCCAACCCCTCG +
Preference number: 3 (lower is better)
Translates to: SSKGSSTGTDWS*VRTLASASNPS
Trigger: CGAGGGGTTGGAAGCTGAGGCCAAGGTTCTGACCCAGCTCCAGTCGGTGCCTGTGGAGGAGCCCTTGGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560160.1
ENST00000560168.1
3UTR-3UTR CAA 90 bp CTTCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGACAGAGCTGGGTCAGAACCTaGGCCTCAGCTTCCAACCCC +
Preference number: 3 (lower is better)
Translates to: LPAAPLFLRLVPALLTRQSWVRT*ASASNP
Trigger: GGGGTTGGAAGCTGAGGCCAAGGTTCTGACCCAGCT...CTGTCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560160.1
ENST00000560168.1
3UTR CCA 72 bp TTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTaGGGGCTGGAAGTCCGGCCCTGGGGCAGGGTGTTC +
Preference number: 3 (lower is better)
Translates to: LIVFQGVTGRGL*GLEVRPWGRVF
Trigger: GAACACCCTGCCCCAGGGCCGGACTTCCAGCCCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
3UTR CCA 72 bp GGTCACAGTTCCAAGGGCTCCTCCACAGGCACCGACTaGAGCTGGGTCAGAACCTTGGCCTCAGCTTCCAAC +
Preference number: 3 (lower is better)
Translates to: GHSSKGSSTGTD*SWVRTLASASN
Trigger: GTTGGAAGCTGAGGCCAAGGTTCTGACCCAGCTCCAGTCGGTGCCTGTGGAGGAGCCCTTGGAACTGTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560160.1
ENST00000560168.1
3UTR-3UTR CAA 90 bp CTTCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGACAGTTGATGAGGTGCACATaGGCAGGGCCTGCTGCAGCT +
Preference number: 3 (lower is better)
Translates to: LPAAPLFLRLVPALLTRQLMRCT*AGPAAA
Trigger: AGCTGCAGCAGGCCCTGCCAATGTGCACCTCATCAA...CTGTCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR TCA 72 bp GCTGCCTGTCCTCCACCTTCGGATTCCAGGCAGTTGTaGCAACACCAGCTATCGGCAGAGCTATTAATAGTG +
Preference number: 3 (lower is better)
Translates to: AACPPPSDSRQL*QHQLSAELLIV
Trigger: CACTATTAATAGCTCTGCCGATAGCTGGTGTTGTCACAACTGCCTGGAATCCGAAGGTGGAGGACAGGCAGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
3UTR-3UTR CAA 90 bp GCAGTTGTGACAACACCAGCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTAATGAGGACAAGGGCTaGAGTCGAGGGGAGCTGGTG +
Preference number: 3 (lower is better)
Translates to: AVVTTPAIGRAINSVSGSNEDKG*SRGELV
Trigger: CACCAGCTCCCCTCGACTCAAGCCCTTGTCCTCATT...ACTCCCTGAAACACTATTAATAGCTCTGCCGATAGCTGGTGTTGTCACAACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR GCA 90 bp GAAGCCGGGCAAGGCGCGGGAGGGCCGGTCCCTGCCAGGAATATGGAGCCCTGGCATCAGACTCGCTCTTaGAGGGCGCGCCGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: EAGQGAGGPVPARNMEPWHQTRS*RARRLR
Trigger: CCGGAGGCGGCGCGCCCTGCAAGAGCGAGTCTGATG...CCAGGGCTCCATATTCCTGGCAGGGACCGGCCCTCCCGCGCCTTGCCCGGCTTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR CCA 90 bp CCAAGGGCTGGTCCCGGAGCAGCCACCTGGGCCCCTTTGGTCTCAGGGGCCTCCCATCAGCCCCTCTGGTaGGGGCGCCGGGAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: PRAGPGAATWAPLVSGASHQPLW*GRREVG
Trigger: CCCAACTTCCCGGCGCCCCCACCAGAGGGGCTGATG...GGAGGCCCCTGAGACCAAAGGGGCCCAGGTGGCTGCTCCGGGACCAGCCCTTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR TCA 90 bp GGAGACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGCTTCGCGGTAGCAGGCCTTaGGCGCTGCGCGGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: GDLDRRWPGIQPPAPPGLRGSRP*ALRGSA
Trigger: AGCGCTCCCGCGCAGCGCTCAAGGCCTGCTACCGCG...AAGCCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGTCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560160.1
CDS-3UTR GCA 90 bp ATGGAGACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGCGCTGCCTGGCCCGGCTaGCAACAGCTGCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: METWTGGGRGYNPQHHQGAAWPG*QQLQGP
Trigger: GGGCCCCTGCAGCTGTTGGCAGCCGGGCCAGGCAGC...GCCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGTCTCCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR CCA 90 bp GGGGGCCACCGGGAGGCCTCCCTCAGGCACGGAGATGGCCGTCTCTGGCTTCAGAGGAATATGGAGCCCTaGGCAGCGGCCTCGGCGGAC +
Preference number: 4 (lower is better)
Translates to: GGHREASLRHGDGRLWLQRNMEP*AAASAD
Trigger: GTCCGCCGAGGCCGCTGCCCAGGGCTCCATATTCCT...CTGAAGCCAGAGACGGCCATCTCCGTGCCTGAGGGAGGCCTCCCGGTGGCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR GCA 90 bp ATGGAGACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGCCTTTCTGGCCGACCCTaGGCCCCACGCCGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: METWTGGGRGYNPQHHQGLSGRP*APRREG
Trigger: GCCTTCCCGGCGTGGGGCGCAGGGTCGGCCAGAAAG...GCCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGTCTCCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000622857.1
CDS-3UTR GCA 90 bp GCCCTGCTGACCAGACAGGCACGGCCGCGGGTGACAACATCAGCCCCTCTGGTGCAGACGCACGCCACCTaGTCGGGCGAGAAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: ALLTRQARPRVTTSAPLVQTHAT*SGEKRR
Trigger: CCTCCGCTTCTCGCCCGAGCAGGTGGCGTGCGTCTG...CACCAGAGGGGCTGATGTTGTCACCCGCGGCCGTGCCTGTCTGGTCAGCAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560160.1
CDS-3UTR GCA 90 bp ATGGAGACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGCCTCGGCCGGGGGCAGTaGGCCCAGGAAGCGGCTCAA +
Preference number: 4 (lower is better)
Translates to: METWTGGGRGYNPQHHQGLGRGQ*AQEAAQ
Trigger: TTGAGCCGCTTCCTGGGCGCACTGCCCCCGGCCGAG...GCCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGTCTCCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560160.1
CDS-3UTR GCA 90 bp GGAGACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGCTTCTCGGCCGGGGGCAGTaGGCCCAGGAAGCGGCTCAA +
Preference number: 4 (lower is better)
Translates to: GDLDRRWPGIQPPAPPGLLGRGQ*AQEAAQ
Trigger: TTGAGCCGCTTCCTGGGCGCACTGCCCCCGGCCGAG...AAGCCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGTCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560160.1
CDS-3UTR GCA 90 bp CCCCCTCCCATTCCTGTCCCTGCGTCTTCAGCACCAATGTCGGGAGAGGCCACGGCTGCCTGGCCCGGCTaGCAACAGCTGCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PPPIPVPASSAPMSGEATAAWPG*QQLQGP
Trigger: GGGCCCCTGCAGCTGTTGGCAGCCGGGCCAGGCAGC...CGTGGCCTCTCCCGACATTGGTGCTGAAGACGCAGGGACAGGAATGGGAGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560168.1
CDS-3UTR GCA 90 bp GCCCTGCTGACCAGACAGGCACGGCCGCGGGTGACAACATCAGCCCCTCTGGTGGTGGCCGAAGGCAGCTaGAGGGCAGTCACGCCCACC +
Preference number: 4 (lower is better)
Translates to: ALLTRQARPRVTTSAPLVVAEGS*RAVTPT
Trigger: GGTGGGCGTGACTGCCCTGCAGCTGCCTTCGGCCAC...CACCAGAGGGGCTGATGTTGTCACCCGCGGCCGTGCCTGTCTGGTCAGCAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR CCA 90 bp GATGGAGACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGTCCTGCAGGAAGGCGTaGTGGGCGGCGGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: DGDLDRRWPGIQPPAPPGSCRKA*WAAGKG
Trigger: CCCCTTCCCCGCCGCCCACCACGCCTTCCTGCAGGA...CCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGTCTCCATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560160.1
CDS-3UTR CCA 90 bp GAAGCCGGGCAAGGCGCGGGAGGGCCGGTCCCTGCCAGGAATATGGAGCCCTGGGGAGATGGCCGTCTCTaGCTTCAGTGGCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: EAGQGAGGPVPARNMEPWGDGRL*LQWQGQ
Trigger: CTGGCCCTGCCACTGAAGCCAGAGACGGCCATCTCC...CCAGGGCTCCATATTCCTGGCAGGGACCGGCCCTCCCGCGCCTTGCCCGGCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR CCA 90 bp GCCCTGCTGACCAGACAGGCACGGCCGCGGGTGACAACATCAGCCCCTCTGGTGGCGGAGGGAGCCTTGTaGTGGGCCTTGGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: ALLTRQARPRVTTSAPLVAEGAL*WALGHW
Trigger: CCAGTGCCCCAAGGCCCACCACAAGGCTCCCTCCGC...CACCAGAGGGGCTGATGTTGTCACCCGCGGCCGTGCCTGTCTGGTCAGCAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR TCA 90 bp GAAGGCAGCTGCAGGGCAGTCACGCCCACCCCGGAGTTGATGAGGTGCACATTGGTCTCGCTGGCCCCCTaGGGGCTGGGCTGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: EGSCRAVTPTPELMRCTLVSLAP*GLGCGG
Trigger: TCCACCGCAGCCCAGCCCTCAGGGGGCCAGCGAGAC...CAATGTGCACCTCATCAACTCCGGGGTGGGCGTGACTGCCCTGCAGCTGCCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR TCA 90 bp GGAGACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGCTTAGGCACGGCCGCGGGTaGCAACATCAGCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: GDLDRRWPGIQPPAPPGLRHGRG*QHQPLW
Trigger: CCAGAGGGGCTGATGTTGTCACCCGCGGCCGTGCCT...AAGCCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGTCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR TCA 90 bp CCCCCTCCCATTCCTGTCCCTGCGTCTTCAGCACCAATGTCGGGAGAGGCCACGGGGACCGAGCGCAGGTaGGAGCCAGGAGAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: PPPIPVPASSAPMSGEATGTERR*EPGEQA
Trigger: GGCCTGCTCTCCTGGCTCTCACCTGCGCTCGGTCCC...CGTGGCCTCTCCCGACATTGGTGCTGAAGACGCAGGGACAGGAATGGGAGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR GCA 90 bp GGCGCGGGGCTGCCTGTCCTCCACCTTCGGATTCCAGGCAGTTGTGACAACACCCTTTCTGGCCGACCCTaGGCCCCACGCCGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GAGLPVLHLRIPGSCDNTLSGRP*APRREG
Trigger: GCCTTCCCGGCGTGGGGCGCAGGGTCGGCCAGAAAG...GGTGTTGTCACAACTGCCTGGAATCCGAAGGTGGAGGACAGGCAGCCCCGCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000622857.1
CDS-3UTR GCA 90 bp GCGCTTAGTTCCAGCCCTGCTGACCAGACAGGCACGGCCGCGGGTGACAACATCGCAACACCGGGTCGCTaGCACGTAGGCGCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: ALSSSPADQTGTAAGDNIATPGR*HVGARP
Trigger: CGGCCGAGCGCCTACGTGGCAGCGACCCGGTGTTGC...GATGTTGTCACCCGCGGCCGTGCCTGTCTGGTCAGCAGGGCTGGAACTAAGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560160.1
CDS-3UTR GCA 90 bp AGACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGCTTGGGTGGCCGAAGGCAGCTaGAGGGCAGTCACGCCCACC +
Preference number: 4 (lower is better)
Translates to: RPGQEVAGDTTPSTTRAWVAEGS*RAVTPT
Trigger: GGTGGGCGTGACTGCCCTGCAGCTGCCTTCGGCCAC...CCAAGCCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR GCA 90 bp AAGGGCTGGTCCCGGAGCAGCCACCTGGGCCCCTTTGGTCTCAGGGGCCTCCGACCGTCACGATGGGGCTaGCAGACACAGGGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: KGWSRSSHLGPFGLRGLRPSRWG*QTQGWP
Trigger: TGGCCAACCCTGTGTCTGGCAGCCCCATCGTGACGG...TCGGAGGCCCCTGAGACCAAAGGGGCCCAGGTGGCTGCTCCGGGACCAGCCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR GCA 90 bp ACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGCTTGGAGGTCAACCTCACCCCCTaGGGTGGCCCCCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: TWTGGGRGYNPQHHQGLEVNLTP*GGPQEQ
Trigger: CTGCTCCTGGGGGCCACCGCAGGGGGTGAGGTTGAC...CTCCAAGCCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR GCA 90 bp GATGGAGACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGGTCAACCTCACCCCCTaGGGTGGCCCCCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: DGDLDRRWPGIQPPAPPGVNLTP*GGPQEQ
Trigger: CTGCTCCTGGGGGCCACCGCAGGGGGTGAGGTTGAC...CCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGTCTCCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR GCA 90 bp AGACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGCTTGGTCAGGGGCGCGGGGCTaGCTGTCCTCCACCTTCGGA +
Preference number: 4 (lower is better)
Translates to: RPGQEVAGDTTPSTTRAWSGARG*LSSTFG
Trigger: TCCGAAGGTGGAGGACAGGCAGCCCCGCGCCCCTGA...CCAAGCCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp CCTGTCCCTGCGTCTTCAGCACCAATGTCGGGAGAGGCCACGGGGCCACACTGGAGCCTCAGCACGGTGTaGGGGGCCTGTGTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PVPASSAPMSGEATGPHWSLSTV*GACVPS
Trigger: GCTGGGGACACAGGCCCCCCACACCGTGCTGAGGCT...CCAGTGTGGCCCCGTGGCCTCTCCCGACATTGGTGCTGAAGACGCAGGGACAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000560168.1
ENST00000622857.1
CDS-3UTR CCA 90 bp GGGGGCCACCGGGAGGCCTCCCTCAGGCACGGAGATGGCCGTCTCTGGCTTCAGGGAGGAAGTTTCCTGTaGGGAGAGAGGGACCGAGCG +
Preference number: 4 (lower is better)
Translates to: GGHREASLRHGDGRLWLQGGSFL*GERDRA
Trigger: CGCTCGGTCCCTCTCTCCCCACAGGAAACTTCCTCC...CTGAAGCCAGAGACGGCCATCTCCGTGCCTGAGGGAGGCCTCCCGGTGGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR TCA 90 bp CTGGAGCTGGGTCAGAACCTTGGCCTCAGCTTCCAACCCCTCGTCAACCTCACCCGCGGTAGCAGGCCTTaGGCGCTGCGCGGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: LELGQNLGLSFQPLVNLTRGSRP*ALRGSA
Trigger: AGCGCTCCCGCGCAGCGCTCAAGGCCTGCTACCGCG...GGTGAGGTTGACGAGGGGTTGGAAGCTGAGGCCAAGGTTCTGACCCAGCTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560160.1
CDS-3UTR TCA 90 bp GGCGCGGGGCTGCCTGTCCTCCACCTTCGGATTCCAGGCAGTTGTGACAACACCAGGGTGCCTAGGGCGTaGGCCTCTGGGAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: GAGLPVLHLRIPGSCDNTRVPRA*ASGRAG
Trigger: CCCTGCTCTCCCAGAGGCTCACGCCCTAGGCACCCT...GGTGTTGTCACAACTGCCTGGAATCCGAAGGTGGAGGACAGGCAGCCCCGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR TCA 90 bp GTCAGGACCCTGAGTCCCCCACGTATATGGCAGGGCACAGCATGGGGAGGGCTGAGGCACGGCCGCGGGTaGCAACATCAGCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: VRTLSPPRIWQGTAWGGLRHGRG*QHQPLW
Trigger: CCAGAGGGGCTGATGTTGTCACCCGCGGCCGTGCCT...CAGCCCTCCCCATGCTGTGCCCTGCCATATACGTGGGGGACTCAGGGTCCTGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR TCA 90 bp ATGGAGACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGCGTCGAGGGGAGCTGGTaGAGGAAGACCCCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: METWTGGGRGYNPQHHQGVEGSW*RKTPVS
Trigger: GGAGACGGGGGTCTTCCTTCACCAGCTCCCCTCGAC...GCCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGTCTCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR TCA 90 bp AGACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGCTTGGGTCGAGGGGAGCTGGTaGAGGAAGACCCCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: RPGQEVAGDTTPSTTRAWVEGSW*RKTPVS
Trigger: GGAGACGGGGGTCTTCCTTCACCAGCTCCCCTCGAC...CCAAGCCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR GCA 90 bp GGCGCGGGGCTGCCTGTCCTCCACCTTCGGATTCCAGGCAGTTGTGACAACACCCAGACGCACGCCACCTaGTCGGGCGAGAAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: GAGLPVLHLRIPGSCDNTQTHAT*SGEKRR
Trigger: CCTCCGCTTCTCGCCCGAGCAGGTGGCGTGCGTCTG...GGTGTTGTCACAACTGCCTGGAATCCGAAGGTGGAGGACAGGCAGCCCCGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560160.1
CDS-3UTR GCA 90 bp GGCAGGGTGTTCCGCTTACAGCTAGTACCAAGTGGAGGGGGCAGGGCCCCTGAGCATCAGACTCGCTCTTaGAGGGCGCGCCGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: GRVFRLQLVPSGGGRAPEHQTRS*RARRLR
Trigger: CCGGAGGCGGCGCGCCCTGCAAGAGCGAGTCTGATG...CTCAGGGGCCCTGCCCCCTCCACTTGGTACTAGCTGTAAGCGGAACACCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR GCA 90 bp ATGGAGACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGCTGGGGAGCCGCTGGCTaGCAGGAAGCTCCCGTTCAC +
Preference number: 4 (lower is better)
Translates to: METWTGGGRGYNPQHHQGWGAAG*QEAPVH
Trigger: GTGAACGGGAGCTTCCTGGCAGCCAGCGGCTCCCCA...GCCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGTCTCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR GCA 90 bp GGGGGCCACCGGGAGGCCTCCCTCAGGCACGGAGATGGCCGTCTCTGGCTTCAGCCGGAGTTGATGAGGTaGACATTGGCAGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GGHREASLRHGDGRLWLQPELMR*TLAGPA
Trigger: AGCAGGCCCTGCCAATGTGCACCTCATCAACTCCGG...CTGAAGCCAGAGACGGCCATCTCCGTGCCTGAGGGAGGCCTCCCGGTGGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR CCA 90 bp GGCGCGGGGCTGCCTGTCCTCCACCTTCGGATTCCAGGCAGTTGTGACAACACCAGAAGCGGAGGCCCGTaGGCGGTTCGGAAGCGGCCT +
Preference number: 4 (lower is better)
Translates to: GAGLPVLHLRIPGSCDNTRSGGP*AVRKRP
Trigger: AGGCCGCTTCCGAACCGCCCACGGGCCTCCGCTTCT...GGTGTTGTCACAACTGCCTGGAATCCGAAGGTGGAGGACAGGCAGCCCCGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560160.1
CDS-3UTR CCA 90 bp GCGCTTAGTTCCAGCCCTGCTGACCAGACAGGCACGGCCGCGGGTGACAACATCAGAAGCGGAGGCCCGTaGGCGGTTCGGAAGCGGCCT +
Preference number: 4 (lower is better)
Translates to: ALSSSPADQTGTAAGDNIRSGGP*AVRKRP
Trigger: AGGCCGCTTCCGAACCGCCCACGGGCCTCCGCTTCT...GATGTTGTCACCCGCGGCCGTGCCTGTCTGGTCAGCAGGGCTGGAACTAAGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560160.1
CDS-3UTR CCA 90 bp CCCCCTCCCATTCCTGTCCCTGCGTCTTCAGCACCAATGTCGGGAGAGGCCACGGCTTCTCGTCCGGCGTaGGGTAGCGGTTGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: PPPIPVPASSAPMSGEATASRPA*GSGCRG
Trigger: ACCGCGGCAACCGCTACCCCACGCCGGACGAGAAGC...CGTGGCCTCTCCCGACATTGGTGCTGAAGACGCAGGGACAGGAATGGGAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560160.1
CDS-3UTR CCA 90 bp CCTGTCCCTGCGTCTTCAGCACCAATGTCGGGAGAGGCCACGGGGCCACACTGGGTTGAGGAGCACTGCTaGGGAGCCGCTGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: PVPASSAPMSGEATGPHWVEEHC*GAAGCQ
Trigger: CTGGCAGCCAGCGGCTCCCCAGCAGTGCTCCTCAAC...CCAGTGTGGCCCCGTGGCCTCTCCCGACATTGGTGCTGAAGACGCAGGGACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560168.1
CDS-3UTR CCA 90 bp GCCCTGCTGACCAGACAGGCACGGCCGCGGGTGACAACATCAGCCCCTCTGGTGGGACCAGAGAGGTCTTaGTCTCGCTGGCCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: ALLTRQARPRVTTSAPLVGPERS*SRWPPE
Trigger: CTCAGGGGGCCAGCGAGACCAAGACCTCTCTGGTCC...CACCAGAGGGGCTGATGTTGTCACCCGCGGCCGTGCCTGTCTGGTCAGCAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR CCA 90 bp GTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGACAGGCACGGCCGCGGGTGACGGGATACCCCGGGGGTaGGGAGAGCGGTACCACTTG +
Preference number: 4 (lower is better)
Translates to: VPALSSSPADQTGTAAGDGIPRG*GERYHL
Trigger: CAAGTGGTACCGCTCTCCCCACCCCCGGGGTATCCC...GTCACCCGCGGCCGTGCCTGTCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR CCA 90 bp GATGGAGACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGGCTGGCGGCAGGACCTaGGAGACGAGCATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: DGDLDRRWPGIQPPAPPGAGGRT*ETSMLV
Trigger: CACCAGCATGCTCGTCTCCCAGGTCCTGCCGCCAGC...CCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGTCTCCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560160.1
CDS-3UTR CCA 90 bp GTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGACAGGCACGGCCGCGGGTGACGCTGGCGGCAGGACCTaGGAGACGAGCATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: VPALSSSPADQTGTAAGDAGGRT*ETSMLV
Trigger: CACCAGCATGCTCGTCTCCCAGGTCCTGCCGCCAGC...GTCACCCGCGGCCGTGCCTGTCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560160.1
ENST00000560168.1
CDS-3UTR CCA 90 bp CCGCTTCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGAGGGGCGCCGGGAAGTTaGGCAGGAGGCCAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: PLPAAPLFLRLVPALLTRGAPGS*AGGQGS
Trigger: ACTCCCCTGGCCTCCTGCCCAACTTCCCGGCGCCCC...TCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000560160.1
ENST00000560168.1
CDS-3UTR CCA 90 bp GAAGGCAGCTGCAGGGCAGTCACGCCCACCCCGGAGTTGATGAGGTGCACATTGGGGGCGCCGGGAAGTTaGGCAGGAGGCCAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: EGSCRAVTPTPELMRCTLGAPGS*AGGQGS
Trigger: ACTCCCCTGGCCTCCTGCCCAACTTCCCGGCGCCCC...CAATGTGCACCTCATCAACTCCGGGGTGGGCGTGACTGCCCTGCAGCTGCCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR CCA 90 bp GGCAGGGTGTTCCGCTTACAGCTAGTACCAAGTGGAGGGGGCAGGGCCCCTGAGAGCCTCAGCACGGTGTaGGGGGCCTGTGTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GRVFRLQLVPSGGGRAPESLSTV*GACVPS
Trigger: GCTGGGGACACAGGCCCCCCACACCGTGCTGAGGCT...CTCAGGGGCCCTGCCCCCTCCACTTGGTACTAGCTGTAAGCGGAACACCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp AGACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGCTTGGCTCAGGGTCGGGGTCTaGCAGCCTCAGCACGGTGTG +
Preference number: 4 (lower is better)
Translates to: RPGQEVAGDTTPSTTRAWLRVGV*QPQHGV
Trigger: CACACCGTGCTGAGGCTGCCAGACCCCGACCCTGAG...CCAAGCCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp GAAGCCGGGCAAGGCGCGGGAGGGCCGGTCCCTGCCAGGAATATGGAGCCCTGGTCCACAGGCACCGACTaGAGCTGGGTCAGAACCTTG +
Preference number: 4 (lower is better)
Translates to: EAGQGAGGPVPARNMEPWSTGTD*SWVRTL
Trigger: CAAGGTTCTGACCCAGCTCCAGTCGGTGCCTGTGGA...CCAGGGCTCCATATTCCTGGCAGGGACCGGCCCTCCCGCGCCTTGCCCGGCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR CCA 90 bp CCCTGGGGCAGGGTGTTCCGCTTACAGCTAGTACCAAGTGGAGGGGGCAGGGCCAGGGGGATGGAGACCTaGACAGGAGGTGGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: PWGRVFRLQLVPSGGGRARGMET*TGGGRG
Trigger: TCCCCGGCCACCTCCTGTCCAGGTCTCCATCCCCCT...GGCCCTGCCCCCTCCACTTGGTACTAGCTGTAAGCGGAACACCCTGCCCCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp ACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGCTTGGAGAGGGGGATGGAGACCTaGACAGGAGGTGGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: TWTGGGRGYNPQHHQGLERGMET*TGGGRG
Trigger: TCCCCGGCCACCTCCTGTCCAGGTCTCCATCCCCCT...CTCCAAGCCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp CCGCTTCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGAGAGGGCTCTGGGGGCTaGAAGTCCGGCCCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: PLPAAPLFLRLVPALLTREGSGG*KSGPGA
Trigger: TGCCCCAGGGCCGGACTTCCAGCCCCCAGAGCCCTC...TCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560160.1
CDS-3UTR CCA 90 bp CCCCCTCCCATTCCTGTCCCTGCGTCTTCAGCACCAATGTCGGGAGAGGCCACGACAGGGAGAGGGCTCTaGGGGCTGGAAGTCCGGCCC +
Preference number: 4 (lower is better)
Translates to: PPPIPVPASSAPMSGEATTGRGL*GLEVRP
Trigger: GGGCCGGACTTCCAGCCCCCAGAGCCCTCTCCCTGT...CGTGGCCTCTCCCGACATTGGTGCTGAAGACGCAGGGACAGGAATGGGAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp CCTGTCCCTGCGTCTTCAGCACCAATGTCGGGAGAGGCCACGGGGCCACACTGGGAGGGAGCCTTGTGGTaGGCCTTGGGGCACTGGGAC +
Preference number: 4 (lower is better)
Translates to: PVPASSAPMSGEATGPHWEGALW*ALGHWD
Trigger: GTCCCAGTGCCCCAAGGCCCACCACAAGGCTCCCTC...CCAGTGTGGCCCCGTGGCCTCTCCCGACATTGGTGCTGAAGACGCAGGGACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR TCA 90 bp GTCAGGACCCTGAGTCCCCCACGTATATGGCAGGGCACAGCATGGGGAGGGCTGCGCACCTCCCCTGTCTaGGGGTCCAGGACCAGAGAG +
Preference number: 4 (lower is better)
Translates to: VRTLSPPRIWQGTAWGGLRTSPV*GSRTRE
Trigger: CTCTCTGGTCCTGGACCCTCAGACAGGGGAGGTGCG...CAGCCCTCCCCATGCTGTGCCCTGCCATATACGTGGGGGACTCAGGGTCCTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR TCA 90 bp CTTCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGACAGTCAGGGGCCTCCGACTaGGCCTCCTCCAGCCGCACC +
Preference number: 4 (lower is better)
Translates to: LPAAPLFLRLVPALLTRQSGASD*ASSSRT
Trigger: GGTGCGGCTGGAGGAGGCTCAGTCGGAGGCCCCTGA...CTGTCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR TCA 90 bp GAAGGCAGCTGCAGGGCAGTCACGCCCACCCCGGAGTTGATGAGGTGCACATTGAGGGTGCCTAGGGCGTaGGCCTCTGGGAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: EGSCRAVTPTPELMRCTLRVPRA*ASGRAG
Trigger: CCCTGCTCTCCCAGAGGCTCACGCCCTAGGCACCCT...CAATGTGCACCTCATCAACTCCGGGGTGGGCGTGACTGCCCTGCAGCTGCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR TCA 90 bp TCCGCTTCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGAGGCACGGCCGCGGGTaGCAACATCAGCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SASSSPSVPALSSSPADQRHGRG*QHQPLW
Trigger: CCAGAGGGGCTGATGTTGTCACCCGCGGCCGTGCCT...CTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAGCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560160.1
ENST00000560168.1
CDS-3UTR TCA 90 bp GGAGACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGCTTGGCTGCCCCCAGGGATaGGGGAATCTTTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: GDLDRRWPGIQPPAPPGLGCPQG*GNLWSG
Trigger: CCCAGACCAAAGATTCCCTCATCCCTGGGGGCAGCC...AAGCCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000622857.1
CDS-3UTR GCA 90 bp GCGCTTAGTTCCAGCCCTGCTGACCAGACAGGCACGGCCGCGGGTGACAACATCTGGGGAGCCGCTGGCTaGCAGGAAGCTCCCGTTCAC +
Preference number: 4 (lower is better)
Translates to: ALSSSPADQTGTAAGDNIWGAAG*QEAPVH
Trigger: GTGAACGGGAGCTTCCTGGCAGCCAGCGGCTCCCCA...GATGTTGTCACCCGCGGCCGTGCCTGTCTGGTCAGCAGGGCTGGAACTAAGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR GCA 90 bp CTTCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGACAGCCGGCTGCCAACAGCTaGAGGGGCCCCACAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LPAAPLFLRLVPALLTRQPAANS*RGPTAW
Trigger: CCAGGCTGTGGGGCCCCTGCAGCTGTTGGCAGCCGG...CTGTCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR GCA 90 bp GATGGAGACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGCCGTCACGATGGGGCTaGCAGACACAGGGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: DGDLDRRWPGIQPPAPPGPSRWG*QTQGWP
Trigger: TGGCCAACCCTGTGTCTGGCAGCCCCATCGTGACGG...CCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGTCTCCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560160.1
CDS-3UTR GCA 90 bp TCCGCTTCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGTCAGGGGCGCGGGGCTaGCTGTCCTCCACCTTCGGA +
Preference number: 4 (lower is better)
Translates to: SASSSPSVPALSSSPADQSGARG*LSSTFG
Trigger: TCCGAAGGTGGAGGACAGGCAGCCCCGCGCCCCTGA...CTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAGCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560160.1
CDS-3UTR GCA 90 bp ATGGAGACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGCGCCCCTGGCAGGAAATaGCACACTGGGGAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: METWTGGGRGYNPQHHQGAPGRK*HTGEGL
Trigger: GAGACCCTCCCCAGTGTGGCATTTCCTGCCAGGGGC...GCCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGTCTCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR GCA 90 bp GTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGACAGGCACGGCCGCGGGTGACGCCCCTGGCAGGAAATaGCACACTGGGGAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: VPALSSSPADQTGTAAGDAPGRK*HTGEGL
Trigger: GAGACCCTCCCCAGTGTGGCATTTCCTGCCAGGGGC...GTCACCCGCGGCCGTGCCTGTCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560160.1
CDS-3UTR GCA 90 bp GTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGACAGGCACGGCCGCGGGTGACGAGAAGTGGAGACTGTaGAGCTGGAGGGCGGGCGGA +
Preference number: 4 (lower is better)
Translates to: VPALSSSPADQTGTAAGDEKWRL*SWRAGG
Trigger: TCCGCCCGCCCTCCAGCTGCACAGTCTCCACTTCTC...GTCACCCGCGGCCGTGCCTGTCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR CCA 90 bp GCCGCTGGCTGCCAGGAAGCTCCCGTTCACCAGGATGGAGGAGGAAGCCGGGCACCTCAGGACTTCGGCTaGACTCGTCCTCAGTCGTGG +
Preference number: 4 (lower is better)
Translates to: AAGCQEAPVHQDGGGSRAPQDFG*TRPQSW
Trigger: CCACGACTGAGGACGAGTCCAGCCGAAGTCCTGAGG...TGCCCGGCTTCCTCCTCCATCCTGGTGAACGGGAGCTTCCTGGCAGCCAGCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR CCA 90 bp TGGGGCAGGGTCACCACCTGTGAGGTGGGTACTACCTGGGGCAGGTTCAATAGTGGCCTCGGCGGACACTaGGGCCGCCCCTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: WGRVTTCEVGTTWGRFNSGLGGH*GRPSLQ
Trigger: CTGGAGAGAGGGGCGGCCCCAGTGTCCGCCGAGGCC...ACTATTGAACCTGCCCCAGGTAGTACCCACCTCACAGGTGGTGACCCTGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR CCA 90 bp GGCAGGGTGTTCCGCTTACAGCTAGTACCAAGTGGAGGGGGCAGGGCCCCTGAGGTTGAGGAGCACTGCTaGGGAGCCGCTGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GRVFRLQLVPSGGGRAPEVEEHC*GAAGCQ
Trigger: CTGGCAGCCAGCGGCTCCCCAGCAGTGCTCCTCAAC...CTCAGGGGCCCTGCCCCCTCCACTTGGTACTAGCTGTAAGCGGAACACCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR CCA 90 bp GTCAGGACCCTGAGTCCCCCACGTATATGGCAGGGCACAGCATGGGGAGGGCTGCTCCTCTCCAAGGGCTaGTCCCGGAGCAGCCACCTG +
Preference number: 4 (lower is better)
Translates to: VRTLSPPRIWQGTAWGGLLLSKG*SRSSHL
Trigger: CAGGTGGCTGCTCCGGGACCAGCCCTTGGAGAGGAG...CAGCCCTCCCCATGCTGTGCCCTGCCATATACGTGGGGGACTCAGGGTCCTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR CCA 90 bp ACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGCTTGGAGGAGCGGTACCACTTGTaGGGCAGCCACAGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: TWTGGGRGYNPQHHQGLEERYHL*GSHSRH
Trigger: GTGCCTGCTGTGGCTGCCCCACAAGTGGTACCGCTC...CTCCAAGCCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR CCA 90 bp ACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGCTTGGAGCCACACCCGTCACGATaGGGCTGCCAGACACAGGGT +
Preference number: 4 (lower is better)
Translates to: TWTGGGRGYNPQHHQGLEPHPSR*GCQTQG
Trigger: ACCCTGTGTCTGGCAGCCCCATCGTGACGGGTGTGG...CTCCAAGCCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560160.1
CDS-3UTR CCA 90 bp GCGCTTAGTTCCAGCCCTGCTGACCAGACAGGCACGGCCGCGGGTGACAACATCGCTGGCGGCAGGACCTaGGAGACGAGCATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: ALSSSPADQTGTAAGDNIAGGRT*ETSMLV
Trigger: CACCAGCATGCTCGTCTCCCAGGTCCTGCCGCCAGC...GATGTTGTCACCCGCGGCCGTGCCTGTCTGGTCAGCAGGGCTGGAACTAAGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560160.1
ENST00000560168.1
CDS-3UTR CCA 90 bp CTTCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGACAGCGTCTCTGGCTTCAGTaGCAGGGCCAGGCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: LPAAPLFLRLVPALLTRQRLWLQ*QGQAGG
Trigger: GCCCCCGGCCTGGCCCTGCCACTGAAGCCAGAGACG...CTGTCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560160.1
ENST00000560168.1
CDS-3UTR CCA 90 bp CCCTGGGGCAGGGTGTTCCGCTTACAGCTAGTACCAAGTGGAGGGGGCAGGGCCGGAGATGGCCGTCTCTaGCTTCAGTGGCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PWGRVFRLQLVPSGGGRAGDGRL*LQWQGQ
Trigger: CTGGCCCTGCCACTGAAGCCAGAGACGGCCATCTCC...GGCCCTGCCCCCTCCACTTGGTACTAGCTGTAAGCGGAACACCCTGCCCCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560160.1
CDS-3UTR CCA 90 bp CCGCTTCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGACATCAGCCCCTCTGGTaGGGGCGCCGGGAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: PLPAAPLFLRLVPALLTRHQPLW*GRREVG
Trigger: CCCAACTTCCCGGCGCCCCCACCAGAGGGGCTGATG...TCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000560160.1
ENST00000560168.1
CDS-3UTR CCA 90 bp ACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGCTTGGAGCAACATCAGCCCCTCTaGTGGGGGCGCCGGGAAGTT +
Preference number: 4 (lower is better)
Translates to: TWTGGGRGYNPQHHQGLEQHQPL*WGRREV
Trigger: AACTTCCCGGCGCCCCCACCAGAGGGGCTGATGTTG...CTCCAAGCCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp ATGGAGACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGCGCCACGGGGCCACACTaGGTCACAGTTCCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: METWTGGGRGYNPQHHQGATGPH*VTVPRA
Trigger: AGCCCTTGGAACTGTGACCCAGTGTGGCCCCGTGGC...GCCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGTCTCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp GGCAGGGTGTTCCGCTTACAGCTAGTACCAAGTGGAGGGGGCAGGGCCCCTGAGAGGGGGATGGAGACCTaGACAGGAGGTGGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: GRVFRLQLVPSGGGRAPERGMET*TGGGRG
Trigger: TCCCCGGCCACCTCCTGTCCAGGTCTCCATCCCCCT...CTCAGGGGCCCTGCCCCCTCCACTTGGTACTAGCTGTAAGCGGAACACCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp ACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGCTTGGAGCTGGAAGTCCGGCCCTaGGGCAGGGTGTTCCGCTTA +
Preference number: 4 (lower is better)
Translates to: TWTGGGRGYNPQHHQGLELEVRP*GRVFRL
Trigger: TAAGCGGAACACCCTGCCCCAGGGCCGGACTTCCAG...CTCCAAGCCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp CCGCTTCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGAACAGGGAGAGGGCTCTaGGGGCTGGAAGTCCGGCCC +
Preference number: 4 (lower is better)
Translates to: PLPAAPLFLRLVPALLTRTGRGL*GLEVRP
Trigger: GGGCCGGACTTCCAGCCCCCAGAGCCCTCTCCCTGT...TCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560160.1
3UTR CAA 72 bp GAAGGCAGCTGCAGGGCAGTCACGCCCACCCCGGAGTaGATGAGGTGCACATTGGCAGGGCCTGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: EGSCRAVTPTPE*MRCTLAGPAAA
Trigger: AGCTGCAGCAGGCCCTGCCAATGTGCACCTCATCAACTCCGGGGTGGGCGTGACTGCCCTGCAGCTGCCTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR TCA 90 bp CGGGGCCACACTGGGTCACAGTTCCAAGGGCTCCTCCACAGGCACCGACTGGAGCGCGGGAGCGCTCCTTaGAGCAGTAGACTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: RGHTGSQFQGLLHRHRLERGSAP*SSRLSP
Trigger: AGGAGACAGTCTACTGCTTCAAGGAGCGCTCCCGCG...CTCCAGTCGGTGCCTGTGGAGGAGCCCTTGGAACTGTGACCCAGTGTGGCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560160.1
CDS-3UTR TCA 90 bp TCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGACAGGCCGCACCTCCCCTGTCTaGGGGTCCAGGACCAGAGAG +
Preference number: 4 (lower is better)
Translates to: SSSPSVPALSSSPADQTGRTSPV*GSRTRE
Trigger: CTCTCTGGTCCTGGACCCTCAGACAGGGGAGGTGCG...GCCTGTCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR TCA 90 bp ATGGAGACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGCCCTGAGTCAGGACCCTaGGTCCCCCACGTATATGGC +
Preference number: 4 (lower is better)
Translates to: METWTGGGRGYNPQHHQGPESGP*VPHVYG
Trigger: GCCATATACGTGGGGGACTCAGGGTCCTGACTCAGG...GCCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGTCTCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR GCA 90 bp TCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGACAGGCGGGAGGGCCGGTCCCTaGCAGGAATATGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: SSSPSVPALSSSPADQTGGRAGP*QEYGAL
Trigger: CAGGGCTCCATATTCCTGGCAGGGACCGGCCCTCCC...GCCTGTCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR GCA 90 bp GTCAGGACCCTGAGTCCCCCACGTATATGGCAGGGCACAGCATGGGGAGGGCTGCCGTCACGATGGGGCTaGCAGACACAGGGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: VRTLSPPRIWQGTAWGGLPSRWG*QTQGWP
Trigger: TGGCCAACCCTGTGTCTGGCAGCCCCATCGTGACGG...CAGCCCTCCCCATGCTGTGCCCTGCCATATACGTGGGGGACTCAGGGTCCTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560160.1
CDS-3UTR GCA 90 bp GATGGAGACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGATGATCTTGCCCTGCTaGAGGGCCACACCCGTCACG +
Preference number: 4 (lower is better)
Translates to: DGDLDRRWPGIQPPAPPGMILPC*RATPVT
Trigger: CGTGACGGGTGTGGCCCTGCAGCAGGGCAAGATCAT...CCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGTCTCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560160.1
CDS-3UTR GCA 90 bp CTTCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGACAGGTCAACCTCACCCCCTaGGGTGGCCCCCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LPAAPLFLRLVPALLTRQVNLTP*GGPQEQ
Trigger: CTGCTCCTGGGGGCCACCGCAGGGGGTGAGGTTGAC...CTGTCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000560160.1
ENST00000560168.1
CDS-3UTR CCA 90 bp GGAGACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGCTTCCTCAGGACTTCGGCTaGACTCGTCCTCAGTCGTGG +
Preference number: 4 (lower is better)
Translates to: GDLDRRWPGIQPPAPPGLPQDFG*TRPQSW
Trigger: CCACGACTGAGGACGAGTCCAGCCGAAGTCCTGAGG...AAGCCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR CCA 90 bp GAAGGCAGCTGCAGGGCAGTCACGCCCACCCCGGAGTTGATGAGGTGCACATTGAGGTCTTGGTCTCGCTaGCCCCCTGAGGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: EGSCRAVTPTPELMRCTLRSWSR*PPEGWA
Trigger: AGCCCAGCCCTCAGGGGGCCAGCGAGACCAAGACCT...CAATGTGCACCTCATCAACTCCGGGGTGGGCGTGACTGCCCTGCAGCTGCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR CCA 90 bp ATGGAGACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGCTCAATAGTGGGGAGGTaGGGCTCAGGCCCGTGGGAT +
Preference number: 4 (lower is better)
Translates to: METWTGGGRGYNPQHHQGSIVGR*GSGPWD
Trigger: ATCCCACGGGCCTGAGCCCCACCTCCCCACTATTGA...GCCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGTCTCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR CCA 90 bp GGCAGGGTGTTCCGCTTACAGCTAGTACCAAGTGGAGGGGGCAGGGCCCCTGAGAGTTTCCTGGGGCAGTaGCCGAAGGCAGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GRVFRLQLVPSGGGRAPESFLGQ*PKAAAG
Trigger: CCCTGCAGCTGCCTTCGGCCACTGCCCCAGGAAACT...CTCAGGGGCCCTGCCCCCTCCACTTGGTACTAGCTGTAAGCGGAACACCCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR CCA 90 bp CCCCCTCCCATTCCTGTCCCTGCGTCTTCAGCACCAATGTCGGGAGAGGCCACGCCACACCCGTCACGATaGGGCTGCCAGACACAGGGT +
Preference number: 4 (lower is better)
Translates to: PPPIPVPASSAPMSGEATPHPSR*GCQTQG
Trigger: ACCCTGTGTCTGGCAGCCCCATCGTGACGGGTGTGG...CGTGGCCTCTCCCGACATTGGTGCTGAAGACGCAGGGACAGGAATGGGAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000560168.1
CDS-3UTR CCA 90 bp GCTGCAGGGCCACACCCGTCACGATGGGGCTGCCAGACACAGGGTTGGCCAGGAGCTGGGTCAGAACCTTaGCCTCAGCTTCCAACCCCT +
Preference number: 4 (lower is better)
Translates to: AAGPHPSRWGCQTQGWPGAGSEP*PQLPTP
Trigger: AGGGGTTGGAAGCTGAGGCCAAGGTTCTGACCCAGC...TCCTGGCCAACCCTGTGTCTGGCAGCCCCATCGTGACGGGTGTGGCCCTGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR CCA 90 bp CGGGGCCACACTGGGTCACAGTTCCAAGGGCTCCTCCACAGGCACCGACTGGAGGGCACCGACTGGAGCTaGGTCAGAACCTTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: RGHTGSQFQGLLHRHRLEGTDWS*VRTLAS
Trigger: TGAGGCCAAGGTTCTGACCCAGCTCCAGTCGGTGCC...CTCCAGTCGGTGCCTGTGGAGGAGCCCTTGGAACTGTGACCCAGTGTGGCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560160.1
ENST00000560168.1
CDS-3UTR CCA 90 bp CCTGTCCCTGCGTCTTCAGCACCAATGTCGGGAGAGGCCACGGGGCCACACTGGGGCACCGACTGGAGCTaGGTCAGAACCTTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: PVPASSAPMSGEATGPHWGTDWS*VRTLAS
Trigger: TGAGGCCAAGGTTCTGACCCAGCTCCAGTCGGTGCC...CCAGTGTGGCCCCGTGGCCTCTCCCGACATTGGTGCTGAAGACGCAGGGACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000560168.1
ENST00000622857.1
CDS-3UTR CCA 90 bp ACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGCTTGGAGGGCACCGACTGGAGCTaGGTCAGAACCTTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: TWTGGGRGYNPQHHQGLEGTDWS*VRTLAS
Trigger: TGAGGCCAAGGTTCTGACCCAGCTCCAGTCGGTGCC...CTCCAAGCCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp GGCAGGGTGTTCCGCTTACAGCTAGTACCAAGTGGAGGGGGCAGGGCCCCTGAGGCCACGGGGCCACACTaGGTCACAGTTCCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: GRVFRLQLVPSGGGRAPEATGPH*VTVPRA
Trigger: AGCCCTTGGAACTGTGACCCAGTGTGGCCCCGTGGC...CTCAGGGGCCCTGCCCCCTCCACTTGGTACTAGCTGTAAGCGGAACACCCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp GCCACACTGGGTCACAGTTCCAAGGGCTCCTCCACAGGCACCGACTGGAGCTGGAGCACCACCAGGGCTTaGAGAGGCCACCCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: ATLGHSSKGSSTGTDWSWSTTRA*RGHPGR
Trigger: TCTGCCTGGGTGGCCTCTCCAAGCCCTGGTGGTGCT...CCAGCTCCAGTCGGTGCCTGTGGAGGAGCCCTTGGAACTGTGACCCAGTGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560160.1
CDS-3UTR CCA 90 bp CCCCCTCCCATTCCTGTCCCTGCGTCTTCAGCACCAATGTCGGGAGAGGCCACGAGCACCACCAGGGCTTaGAGAGGCCACCCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: PPPIPVPASSAPMSGEATSTTRA*RGHPGR
Trigger: TCTGCCTGGGTGGCCTCTCCAAGCCCTGGTGGTGCT...CGTGGCCTCTCCCGACATTGGTGCTGAAGACGCAGGGACAGGAATGGGAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp CTTCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGACAGGGGTACCTGGGGCAGTaGCCGAAGGCAGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: LPAAPLFLRLVPALLTRQGYLGQ*PKAAAG
Trigger: CCCTGCAGCTGCCTTCGGCCACTGCCCCAGGTACCC...CTGTCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560168.1
3UTR CAA 72 bp GCCACACCCGTCACGATGGGGCTGCCAGACACAGGGTaGGCCAGGAGGAAGTTTCCTGTGGGGAGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: ATPVTMGLPDTG*ARRKFPVGREG
Trigger: TCCCTCTCTCCCCACAGGAAACTTCCTCCTGGCCAACCCTGTGTCTGGCAGCCCCATCGTGACGGGTGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR TCA 90 bp AGGGCTGCCCCCAGGGATGAGGGAATCTTTGGTCTGGGCCGGATAATGAGGACACCTCCGCCCCGAGACTaGGCTTCTGCACGCCTCCGT +
Preference number: 4 (lower is better)
Translates to: RAAPRDEGIFGLGRIMRTPPPRD*ASARLR
Trigger: ACGGAGGCGTGCAGAAGCTCAGTCTCGGGGCGGAGG...TGTCCTCATTATCCGGCCCAGACCAAAGATTCCCTCATCCCTGGGGGCAGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR TCA 90 bp CACACTGGGTCACAGTTCCAAGGGCTCCTCCACAGGCACCGACTGGAGCTGGGTCAGGGTCACCACCTGTaGGGTGGGTACTACCTGGGG +
Preference number: 4 (lower is better)
Translates to: HTGSQFQGLLHRHRLELGQGHHL*GGYYLG
Trigger: CCCCAGGTAGTACCCACCTCACAGGTGGTGACCCTG...ACCCAGCTCCAGTCGGTGCCTGTGGAGGAGCCCTTGGAACTGTGACCCAGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR TCA 90 bp CCTGTCCCTGCGTCTTCAGCACCAATGTCGGGAGAGGCCACGGGGCCACACTGGGGCAGAAGGATGTGGTaGCTGGGGTCTTCAGCAACC +
Preference number: 4 (lower is better)
Translates to: PVPASSAPMSGEATGPHWGRRMW*LGSSAT
Trigger: GGTTGCTGAAGACCCCAGTCACCACATCCTTCTGCC...CCAGTGTGGCCCCGTGGCCTCTCCCGACATTGGTGCTGAAGACGCAGGGACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR TCA 90 bp CCCTGGGGCAGGGTGTTCCGCTTACAGCTAGTACCAAGTGGAGGGGGCAGGGCCGGCAGAAGGATGTGGTaGCTGGGGTCTTCAGCAACC +
Preference number: 4 (lower is better)
Translates to: PWGRVFRLQLVPSGGGRAGRRMW*LGSSAT
Trigger: GGTTGCTGAAGACCCCAGTCACCACATCCTTCTGCC...GGCCCTGCCCCCTCCACTTGGTACTAGCTGTAAGCGGAACACCCTGCCCCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR TCA 90 bp GCGCTTAGTTCCAGCCCTGCTGACCAGACAGGCACGGCCGCGGGTGACAACATCCCTGAGTCAGGACCCTaGGTCCCCCACGTATATGGC +
Preference number: 4 (lower is better)
Translates to: ALSSSPADQTGTAAGDNIPESGP*VPHVYG
Trigger: GCCATATACGTGGGGGACTCAGGGTCCTGACTCAGG...GATGTTGTCACCCGCGGCCGTGCCTGTCTGGTCAGCAGGGCTGGAACTAAGCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560160.1
CDS-3UTR TCA 90 bp ATGGGGCTGCCAGACACAGGGTTGGCCAGGAGGAAGTTTCCTGTGGGGAGAGAGGGGACTTGCCAGGGATaGGATGCCCTCCAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: MGLPDTGLARRKFPVGREGTCQG*DALQEP
Trigger: GGGCTCCTGGAGGGCATCTCATCCCTGGCAAGTCCC...CTCTCTCCCCACAGGAAACTTCCTCCTGGCCAACCCTGTGTCTGGCAGCCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR GCA 90 bp TCCGCTTCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGGCCGCCTGCAAAGTCTaGAAGAGCTGGCGCGCTTCC +
Preference number: 4 (lower is better)
Translates to: SASSSPSVPALSSSPADQAACKV*KSWRAS
Trigger: GGAAGCGCGCCAGCTCTTGCAGACTTTGCAGGCGGC...CTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAGCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR GCA 90 bp CCCCCTCCCATTCCTGTCCCTGCGTCTTCAGCACCAATGTCGGGAGAGGCCACGTCACCCTCGGCCGCCTaGAAAGTCTGCAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PPPIPVPASSAPMSGEATSPSAA*KVCKSW
Trigger: CCAGCTCTTGCAGACTTTGCAGGCGGCCGAGGGTGA...CGTGGCCTCTCCCGACATTGGTGCTGAAGACGCAGGGACAGGAATGGGAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR GCA 90 bp GACCCTGAGTCCCCCACGTATATGGCAGGGCACAGCATGGGGAGGGCTGTAACAGCAGGCCTTGAGCGCTaGGCGGGAGCGCTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: DPESPTYMAGHSMGRAVTAGLER*AGALLE
Trigger: TTCAAGGAGCGCTCCCGCGCAGCGCTCAAGGCCTGC...TGTTACAGCCCTCCCCATGCTGTGCCCTGCCATATACGTGGGGGACTCAGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560160.1
CDS-3UTR GCA 90 bp GGCGCGGGGCTGCCTGTCCTCCACCTTCGGATTCCAGGCAGTTGTGACAACACCATGATCTTGCCCTGCTaGAGGGCCACACCCGTCACG +
Preference number: 4 (lower is better)
Translates to: GAGLPVLHLRIPGSCDNTMILPC*RATPVT
Trigger: CGTGACGGGTGTGGCCCTGCAGCAGGGCAAGATCAT...GGTGTTGTCACAACTGCCTGGAATCCGAAGGTGGAGGACAGGCAGCCCCGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560160.1
CDS-3UTR GCA 90 bp GGCAGGGTGTTCCGCTTACAGCTAGTACCAAGTGGAGGGGGCAGGGCCCCTGAGGCTGTGCAGAAAGGGTaGCTAGGGCGTGAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GRVFRLQLVPSGGGRAPEAVQKG*LGREPL
Trigger: CAGAGGCTCACGCCCTAGGCACCCTTTCTGCACAGC...CTCAGGGGCCCTGCCCCCTCCACTTGGTACTAGCTGTAAGCGGAACACCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR GCA 90 bp TCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGACAGGCCCTCTCCGAGATGACTaGACCCCTCCCCGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: SSSPSVPALSSSPADQTGPLRDD*TPPRLS
Trigger: TGAGAGCCGGGGAGGGGTGCAGTCATCTCGGAGAGG...GCCTGTCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR CCA 90 bp CCTGTCCCTGCGTCTTCAGCACCAATGTCGGGAGAGGCCACGGGGCCACACTGGAAAGTCTGCAAGAGCTaGCGCGCTTCCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PVPASSAPMSGEATGPHWKVCKS*RASSSS
Trigger: GGAGGAGGAGGAAGCGCGCCAGCTCTTGCAGACTTT...CCAGTGTGGCCCCGTGGCCTCTCCCGACATTGGTGCTGAAGACGCAGGGACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560168.1
CDS-3UTR CCA 90 bp TCCGCTTCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGTCCCTGCCAGGAATATaGAGCCCTGGGCAGCGGCCT +
Preference number: 4 (lower is better)
Translates to: SASSSPSVPALSSSPADQSLPGI*SPGQRP
Trigger: AGGCCGCTGCCCAGGGCTCCATATTCCTGGCAGGGA...CTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAGCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR CCA 90 bp GCGCTTAGTTCCAGCCCTGCTGACCAGACAGGCACGGCCGCGGGTGACAACATCTCCCGTTCACCAGGATaGAGGAGGAAGCCGGGCAAG +
Preference number: 4 (lower is better)
Translates to: ALSSSPADQTGTAAGDNISRSPG*RRKPGK
Trigger: CTTGCCCGGCTTCCTCCTCCATCCTGGTGAACGGGA...GATGTTGTCACCCGCGGCCGTGCCTGTCTGGTCAGCAGGGCTGGAACTAAGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR CCA 90 bp CTTCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGACAGCTCCTCTCCAAGGGCTaGTCCCGGAGCAGCCACCTG +
Preference number: 4 (lower is better)
Translates to: LPAAPLFLRLVPALLTRQLLSKG*SRSSHL
Trigger: CAGGTGGCTGCTCCGGGACCAGCCCTTGGAGAGGAG...CTGTCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR CCA 90 bp CCTGTCCCTGCGTCTTCAGCACCAATGTCGGGAGAGGCCACGGGGCCACACTGGTCACCACCTGTGAGGTaGGTACTACCTGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: PVPASSAPMSGEATGPHWSPPVR*VLPGAG
Trigger: ACCTGCCCCAGGTAGTACCCACCTCACAGGTGGTGA...CCAGTGTGGCCCCGTGGCCTCTCCCGACATTGGTGCTGAAGACGCAGGGACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560168.1
CDS-3UTR CCA 90 bp GTCAGGACCCTGAGTCCCCCACGTATATGGCAGGGCACAGCATGGGGAGGGCTGCAGGAGGAAGTTTCCTaGGGCAGTGGCCGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: VRTLSPPRIWQGTAWGGLQEEVS*GSGRRQ
Trigger: CTGCCTTCGGCCACTGCCCCAGGAAACTTCCTCCTG...CAGCCCTCCCCATGCTGTGCCCTGCCATATACGTGGGGGACTCAGGGTCCTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR CCA 90 bp CCGCTTCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGACCACACCCGTCACGATaGGGCTGCCAGACACAGGGT +
Preference number: 4 (lower is better)
Translates to: PLPAAPLFLRLVPALLTRPHPSR*GCQTQG
Trigger: ACCCTGTGTCTGGCAGCCCCATCGTGACGGGTGTGG...TCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560160.1
ENST00000560168.1
CDS-3UTR CCA 90 bp AGGGCTGCCCCCAGGGATGAGGGAATCTTTGGTCTGGGCCGGATAATGAGGACACATCAGCCCCTCTGGTaGGGGCGCCGGGAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: RAAPRDEGIFGLGRIMRTHQPLW*GRREVG
Trigger: CCCAACTTCCCGGCGCCCCCACCAGAGGGGCTGATG...TGTCCTCATTATCCGGCCCAGACCAAAGATTCCCTCATCCCTGGGGGCAGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000622857.1
CDS-3UTR CCA 90 bp CACACTGGGTCACAGTTCCAAGGGCTCCTCCACAGGCACCGACTGGAGCTGGGTCAACATCAGCCCCTCTaGTGGGGGCGCCGGGAAGTT +
Preference number: 4 (lower is better)
Translates to: HTGSQFQGLLHRHRLELGQHQPL*WGRREV
Trigger: AACTTCCCGGCGCCCCCACCAGAGGGGCTGATGTTG...ACCCAGCTCCAGTCGGTGCCTGTGGAGGAGCCCTTGGAACTGTGACCCAGTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560160.1
ENST00000560168.1
CDS-3UTR CCA 90 bp CTGGAGCTGGGTCAGAACCTTGGCCTCAGCTTCCAACCCCTCGTCAACCTCACCCTCAGGGTCGGGGTCTaGCAGCCTCAGCACGGTGTG +
Preference number: 4 (lower is better)
Translates to: LELGQNLGLSFQPLVNLTLRVGV*QPQHGV
Trigger: CACACCGTGCTGAGGCTGCCAGACCCCGACCCTGAG...GGTGAGGTTGACGAGGGGTTGGAAGCTGAGGCCAAGGTTCTGACCCAGCTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560160.1
ENST00000560168.1
CDS-3UTR CCA 90 bp ATGGAGACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGCGCTGGGTCAGAACCTTaGCCTCAGCTTCCAACCCCT +
Preference number: 4 (lower is better)
Translates to: METWTGGGRGYNPQHHQGAGSEP*PQLPTP
Trigger: AGGGGTTGGAAGCTGAGGCCAAGGTTCTGACCCAGC...GCCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGTCTCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp GGCGCGGGGCTGCCTGTCCTCCACCTTCGGATTCCAGGCAGTTGTGACAACACCGGCACCGACTGGAGCTaGGTCAGAACCTTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: GAGLPVLHLRIPGSCDNTGTDWS*VRTLAS
Trigger: TGAGGCCAAGGTTCTGACCCAGCTCCAGTCGGTGCC...GGTGTTGTCACAACTGCCTGGAATCCGAAGGTGGAGGACAGGCAGCCCCGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp TCCGCTTCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGGCCACGGGGCCACACTaGGTCACAGTTCCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: SASSSPSVPALSSSPADQATGPH*VTVPRA
Trigger: AGCCCTTGGAACTGTGACCCAGTGTGGCCCCGTGGC...CTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAGCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560160.1
ENST00000560168.1
CDS-3UTR CCA 90 bp ATGGAGACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGCCCATCCAAAGGGGGATaGAGACCTGGACAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: METWTGGGRGYNPQHHQGPSKGG*RPGQEV
Trigger: CACCTCCTGTCCAGGTCTCCATCCCCCTTTGGATGG...GCCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGTCTCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp ATGGAGACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGCAGTCCCCCACGTATATaGCAGGGCACAGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: METWTGGGRGYNPQHHQGSPPRI*QGTAWG
Trigger: TCCCCATGCTGTGCCCTGCCATATACGTGGGGGACT...GCCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGTCTCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp ACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGCTTGGAGAGTCCCCCACGTATATaGCAGGGCACAGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: TWTGGGRGYNPQHHQGLESPPRI*QGTAWG
Trigger: TCCCCATGCTGTGCCCTGCCATATACGTGGGGGACT...CTCCAAGCCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp GTCAGGACCCTGAGTCCCCCACGTATATGGCAGGGCACAGCATGGGGAGGGCTGCCTCAGGCACGGAGATaGCCGTCTCTGGCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: VRTLSPPRIWQGTAWGGLPQARR*PSLASE
Trigger: CTCTGAAGCCAGAGACGGCCATCTCCGTGCCTGAGG...CAGCCCTCCCCATGCTGTGCCCTGCCATATACGTGGGGGACTCAGGGTCCTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622857.1
CDS-3UTR TCA 90 bp GGCGCGGGGCTGCCTGTCCTCCACCTTCGGATTCCAGGCAGTTGTGACAACACCGGCAGAAGGATGTGGTaGCTGGGGTCTTCAGCAACC +
Preference number: 4 (lower is better)
Translates to: GAGLPVLHLRIPGSCDNTGRRMW*LGSSAT
Trigger: GGTTGCTGAAGACCCCAGTCACCACATCCTTCTGCC...GGTGTTGTCACAACTGCCTGGAATCCGAAGGTGGAGGACAGGCAGCCCCGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR GCA 90 bp GACCCTGAGTCCCCCACGTATATGGCAGGGCACAGCATGGGGAGGGCTGTAACACCGAGACTGAGCTTCTaGACGCCTCCGTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: DPESPTYMAGHSMGRAVTPRLSF*TPPSPG
Trigger: CCCTGGAGACGGAGGCGTGCAGAAGCTCAGTCTCGG...TGTTACAGCCCTCCCCATGCTGTGCCCTGCCATATACGTGGGGGACTCAGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR GCA 90 bp TGGGGCAGGGTCACCACCTGTGAGGTGGGTACTACCTGGGGCAGGTTCAATAGTCCACCTTCACAGGGCTaGCTGGCCCGGCTGCCAACA +
Preference number: 4 (lower is better)
Translates to: WGRVTTCEVGTTWGRFNSPPSQG*LARLPT
Trigger: TGTTGGCAGCCGGGCCAGGCAGCCCTGTGAAGGTGG...ACTATTGAACCTGCCCCAGGTAGTACCCACCTCACAGGTGGTGACCCTGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR GCA 90 bp GAAGGCAGCTGCAGGGCAGTCACGCCCACCCCGGAGTTGATGAGGTGCACATTGATGATCTTGCCCTGCTaGAGGGCCACACCCGTCACG +
Preference number: 4 (lower is better)
Translates to: EGSCRAVTPTPELMRCTLMILPC*RATPVT
Trigger: CGTGACGGGTGTGGCCCTGCAGCAGGGCAAGATCAT...CAATGTGCACCTCATCAACTCCGGGGTGGGCGTGACTGCCCTGCAGCTGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR GCA 90 bp TCCGCTTCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGGCTGTGCAGAAAGGGTaGCTAGGGCGTGAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SASSSPSVPALSSSPADQAVQKG*LGREPL
Trigger: CAGAGGCTCACGCCCTAGGCACCCTTTCTGCACAGC...CTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAGCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560160.1
ENST00000560168.1
CDS-3UTR GCA 90 bp CCTGTCCTCCACCTTCGGATTCCAGGCAGTTGTGACAACACCAGCTATCGGCAGTCAGGGGCGCGGGGCTaGCTGTCCTCCACCTTCGGA +
Preference number: 4 (lower is better)
Translates to: PVLHLRIPGSCDNTSYRQSGARG*LSSTFG
Trigger: TCCGAAGGTGGAGGACAGGCAGCCCCGCGCCCCTGA...CTGCCGATAGCTGGTGTTGTCACAACTGCCTGGAATCCGAAGGTGGAGGACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp CCTGTCCTCCACCTTCGGATTCCAGGCAGTTGTGACAACACCAGCTATCGGCAGGCTTCTCGTCCGGCGTaGGGTAGCGGTTGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: PVLHLRIPGSCDNTSYRQASRPA*GSGCRG
Trigger: ACCGCGGCAACCGCTACCCCACGCCGGACGAGAAGC...CTGCCGATAGCTGGTGTTGTCACAACTGCCTGGAATCCGAAGGTGGAGGACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560160.1
CDS-3UTR CCA 90 bp GACCCTGAGTCCCCCACGTATATGGCAGGGCACAGCATGGGGAGGGCTGTAACAGGACCAGAGAGGTCTTaGTCTCGCTGGCCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: DPESPTYMAGHSMGRAVTGPERS*SRWPPE
Trigger: CTCAGGGGGCCAGCGAGACCAAGACCTCTCTGGTCC...TGTTACAGCCCTCCCCATGCTGTGCCCTGCCATATACGTGGGGGACTCAGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR CCA 90 bp ATGGGGCTGCCAGACACAGGGTTGGCCAGGAGGAAGTTTCCTGTGGGGAGAGAGGAGCGGTACCACTTGTaGGGCAGCCACAGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: MGLPDTGLARRKFPVGREERYHL*GSHSRH
Trigger: GTGCCTGCTGTGGCTGCCCCACAAGTGGTACCGCTC...CTCTCTCCCCACAGGAAACTTCCTCCTGGCCAACCCTGTGTCTGGCAGCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR CCA 90 bp CCGCTTCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGATCAATAGTGGGGAGGTaGGGCTCAGGCCCGTGGGAT +
Preference number: 4 (lower is better)
Translates to: PLPAAPLFLRLVPALLTRSIVGR*GSGPWD
Trigger: ATCCCACGGGCCTGAGCCCCACCTCCCCACTATTGA...TCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR CCA 90 bp GCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGGCTGGGGGCGCCGGGAAGTTaGGCAGGAGGCCAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: AELLIVFQGVTGRGLWGLGAPGS*AGGQGS
Trigger: ACTCCCCTGGCCTCCTGCCCAACTTCCCGGCGCCCC...CAGCCCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp GTCAGGACCCTGAGTCCCCCACGTATATGGCAGGGCACAGCATGGGGAGGGCTGGCTGGGTCAGAACCTTaGCCTCAGCTTCCAACCCCT +
Preference number: 4 (lower is better)
Translates to: VRTLSPPRIWQGTAWGGLAGSEP*PQLPTP
Trigger: AGGGGTTGGAAGCTGAGGCCAAGGTTCTGACCCAGC...CAGCCCTCCCCATGCTGTGCCCTGCCATATACGTGGGGGACTCAGGGTCCTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp ACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGCTTGGAGCAGGAAATGCCACACTaGGGAGGGTCTCCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: TWTGGGRGYNPQHHQGLEQEMPH*GGSPVS
Trigger: TGAGACTGGAGACCCTCCCCAGTGTGGCATTTCCTG...CTCCAAGCCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp TGGGGCAGGGTCACCACCTGTGAGGTGGGTACTACCTGGGGCAGGTTCAATAGTGGAGATGGGGGTACCTaGGGCAGTGGCCGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: WGRVTTCEVGTTWGRFNSGDGGT*GSGRRQ
Trigger: CTGCCTTCGGCCACTGCCCCAGGTACCCCCATCTCC...ACTATTGAACCTGCCCCAGGTAGTACCCACCTCACAGGTGGTGACCCTGCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR CCA 90 bp ACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGCTTGGAGTGCCAGACACAGGGTTaGCCAGGAGGAAGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: TWTGGGRGYNPQHHQGLECQTQG*PGGSFL
Trigger: GAGGAAACTTCCTCCTGGCCAACCCTGTGTCTGGCA...CTCCAAGCCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560160.1
3UTR CAA 72 bp TCCTCCACAGGCACCGACTGGAGCTGGGTCAGAACCTaGGCCTCAGCTTCCAACCCCTCGTCAACCTCACCC +
Preference number: 4 (lower is better)
Translates to: SSTGTDWSWVRT*ASASNPSSTSP
Trigger: GGGTGAGGTTGACGAGGGGTTGGAAGCTGAGGCCAAGGTTCTGACCCAGCTCCAGTCGGTGCCTGTGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560160.1
ENST00000560168.1
CDS-3UTR TCA 90 bp GTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGACAGGCACGGCCGCGGGTGACGATTCCAGGCAGTTGTaGCAACACCAGCTATCGGCA +
Preference number: 4 (lower is better)
Translates to: VPALSSSPADQTGTAAGDDSRQL*QHQLSA
Trigger: TGCCGATAGCTGGTGTTGTCACAACTGCCTGGAATC...GTCACCCGCGGCCGTGCCTGTCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560160.1
CDS-3UTR GCA 90 bp GCCCCCAGGGATGAGGGAATCTTTGGTCTGGGCCGGATAATGAGGACAAGGGCTGCCGCCTGCAAAGTCTaGAAGAGCTGGCGCGCTTCC +
Preference number: 4 (lower is better)
Translates to: APRDEGIFGLGRIMRTRAAACKV*KSWRAS
Trigger: GGAAGCGCGCCAGCTCTTGCAGACTTTGCAGGCGGC...AGCCCTTGTCCTCATTATCCGGCCCAGACCAAAGATTCCCTCATCCCTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR GCA 90 bp TCCTCCACCTTCGGATTCCAGGCAGTTGTGACAACACCAGCTATCGGCAGAGCTGTCAACCTCACCCCCTaGGGTGGCCCCCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SSTFGFQAVVTTPAIGRAVNLTP*GGPQEQ
Trigger: CTGCTCCTGGGGGCCACCGCAGGGGGTGAGGTTGAC...AGCTCTGCCGATAGCTGGTGTTGTCACAACTGCCTGGAATCCGAAGGTGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp GACCCTGAGTCCCCCACGTATATGGCAGGGCACAGCATGGGGAGGGCTGTAACATCTCGATCTTCTTTCTaGCCGACCCTGCGCCCCACG +
Preference number: 4 (lower is better)
Translates to: DPESPTYMAGHSMGRAVTSRSSF*PTLRPT
Trigger: CGTGGGGCGCAGGGTCGGCCAGAAAGAAGATCGAGA...TGTTACAGCCCTCCCCATGCTGTGCCCTGCCATATACGTGGGGGACTCAGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000622857.1
CDS-3UTR CCA 90 bp GCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGCGTACTCGCCCCGCTaGAAGGCCACCAGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: AIGRAINSVSGSDRERALAYSPR*KATRAR
Trigger: GCGGGCCCTGGTGGCCTTCCAGCGGGGCGAGTACGC...CAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560160.1
CDS-3UTR CCA 90 bp CCAGCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTGGCCTCGGCGGACACTaGGGCCGCCCCTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PAIGRAINSVSGSDRERAGLGGH*GRPSLQ
Trigger: CTGGAGAGAGGGGCGGCCCCAGTGTCCGCCGAGGCC...AGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR CCA 90 bp TCCGCTTCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGTCACCACCTGTGAGGTaGGTACTACCTGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: SASSSPSVPALSSSPADQSPPVR*VLPGAG
Trigger: ACCTGCCCCAGGTAGTACCCACCTCACAGGTGGTGA...CTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR CCA 90 bp ATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGCGTCTCTGGCTTCAGTaGCAGGGCCAGGCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: IGRAINSVSGSDRERALGRLWLQ*QGQAGG
Trigger: GCCCCCGGCCTGGCCCTGCCACTGAAGCCAGAGACG...CCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560160.1
CDS-3UTR CCA 90 bp CTTCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGACAGCCTCAGGCACGGAGATaGCCGTCTCTGGCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: LPAAPLFLRLVPALLTRQPQARR*PSLASV
Trigger: CACTGAAGCCAGAGACGGCCATCTCCGTGCCTGAGG...CTGTCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560160.1
ENST00000560168.1
CDS-3UTR CCA 90 bp GAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGGCTGGAAGGGGCGCCGGGAAGTTaGGCAGGAGGCCAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: ELLIVFQGVTGRGLWGLEGAPGS*AGGQGS
Trigger: ACTCCCCTGGCCTCCTGCCCAACTTCCCGGCGCCCC...TTCCAGCCCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp CACACTGGGTCACAGTTCCAAGGGCTCCTCCACAGGCACCGACTGGAGCTGGGTTCCACAGGCACCGACTaGAGCTGGGTCAGAACCTTG +
Preference number: 4 (lower is better)
Translates to: HTGSQFQGLLHRHRLELGSTGTD*SWVRTL
Trigger: CAAGGTTCTGACCCAGCTCCAGTCGGTGCCTGTGGA...ACCCAGCTCCAGTCGGTGCCTGTGGAGGAGCCCTTGGAACTGTGACCCAGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560160.1
ENST00000560168.1
CDS-3UTR CCA 90 bp CCTGTCCCTGCGTCTTCAGCACCAATGTCGGGAGAGGCCACGGGGCCACACTGGGAAGGATGTGGTGACTaGGGTCTTCAGCAACCGCAT +
Preference number: 4 (lower is better)
Translates to: PVPASSAPMSGEATGPHWEGCGD*GLQQPH
Trigger: ATGCGGTTGCTGAAGACCCCAGTCACCACATCCTTC...CCAGTGTGGCCCCGTGGCCTCTCCCGACATTGGTGCTGAAGACGCAGGGACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp TCCGCTTCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGCCATCCAAAGGGGGATaGAGACCTGGACAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SASSSPSVPALSSSPADQPSKGG*RPGQEV
Trigger: CACCTCCTGTCCAGGTCTCCATCCCCCTTTGGATGG...CTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAGCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560160.1
CDS-3UTR CCA 90 bp ATGGGGCTGCCAGACACAGGGTTGGCCAGGAGGAAGTTTCCTGTGGGGAGAGAGTGGGCCTTGGGGCACTaGGACTTGCCAGGGATGAGA +
Preference number: 4 (lower is better)
Translates to: MGLPDTGLARRKFPVGREWALGH*DLPGMR
Trigger: TCTCATCCCTGGCAAGTCCCAGTGCCCCAAGGCCCA...CTCTCTCCCCACAGGAAACTTCCTCCTGGCCAACCCTGTGTCTGGCAGCCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR TCA 90 bp CCTGTCCTCCACCTTCGGATTCCAGGCAGTTGTGACAACACCAGCTATCGGCAGCAGGGTCACCACCTGTaGGGTGGGTACTACCTGGGG +
Preference number: 4 (lower is better)
Translates to: PVLHLRIPGSCDNTSYRQQGHHL*GGYYLG
Trigger: CCCCAGGTAGTACCCACCTCACAGGTGGTGACCCTG...CTGCCGATAGCTGGTGTTGTCACAACTGCCTGGAATCCGAAGGTGGAGGACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR TCA 90 bp AGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGGCTGGAAGGGTGCCTAGGGCGTaGGCCTCTGGGAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: RAINSVSGSDRERALGAGRVPRA*ASGRAG
Trigger: CCCTGCTCTCCCAGAGGCTCACGCCCTAGGCACCCT...TCCAGCCCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR TCA 90 bp ATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGAGGCACGGCCGCGGGTaGCAACATCAGCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: IGRAINSVSGSDRERALGRHGRG*QHQPLW
Trigger: CCAGAGGGGCTGATGTTGTCACCCGCGGCCGTGCCT...CCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR GCA 90 bp GCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGCAACACCGGGTCGCTaGCACGTAGGCGCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: AIGRAINSVSGSDRERALATPGR*HVGARP
Trigger: CGGCCGAGCGCCTACGTGGCAGCGACCCGGTGTTGC...CAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560160.1
CDS-3UTR GCA 90 bp CCAGCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCCGGCTGCCAACAGCTaGAGGGGCCCCACAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PAIGRAINSVSGSDRERAPAANS*RGPTAW
Trigger: CCAGGCTGTGGGGCCCCTGCAGCTGTTGGCAGCCGG...AGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR GCA 90 bp TCCTCCACCTTCGGATTCCAGGCAGTTGTGACAACACCAGCTATCGGCAGAGCTCCACCTTCACAGGGCTaGCTGGCCCGGCTGCCAACA +
Preference number: 4 (lower is better)
Translates to: SSTFGFQAVVTTPAIGRAPPSQG*LARLPT
Trigger: TGTTGGCAGCCGGGCCAGGCAGCCCTGTGAAGGTGG...AGCTCTGCCGATAGCTGGTGTTGTCACAACTGCCTGGAATCCGAAGGTGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR GCA 90 bp GACCCTGAGTCCCCCACGTATATGGCAGGGCACAGCATGGGGAGGGCTGTAACACCGGAGTTGATGAGGTaGACATTGGCAGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: DPESPTYMAGHSMGRAVTPELMR*TLAGPA
Trigger: AGCAGGCCCTGCCAATGTGCACCTCATCAACTCCGG...TGTTACAGCCCTCCCCATGCTGTGCCCTGCCATATACGTGGGGGACTCAGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR GCA 90 bp GCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGGCTGGAGGAAGTTTCCTCTTaGAGGGCGCGCCGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: AELLIVFQGVTGRGLWGLEEVSS*RARRLR
Trigger: CCGGAGGCGGCGCGCCCTGCAAGAGGAAACTTCCTC...CAGCCCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560160.1
CDS-3UTR CCA 90 bp CCTGTCCTCCACCTTCGGATTCCAGGCAGTTGTGACAACACCAGCTATCGGCAGTTTTCCCTCCGCCTCTaGCCGCGCTTTCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: PVLHLRIPGSCDNTSYRQFSLRL*PRFLPP
Trigger: GGGAGGCAGAAAGCGCGGCCAGAGGCGGAGGGAAAA...CTGCCGATAGCTGGTGTTGTCACAACTGCCTGGAATCCGAAGGTGGAGGACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR CCA 90 bp CTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGTCCTGCAGGAAGGCGTaGTGGGCGGCGGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: LSAELLIVFQGVTGRGLWSCRKA*WAAGKG
Trigger: CCCCTTCCCCGCCGCCCACCACGCCTTCCTGCAGGA...CCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560160.1
CDS-3UTR CCA 90 bp AGGGCTGCCCCCAGGGATGAGGGAATCTTTGGTCTGGGCCGGATAATGAGGACATCCCGTTCACCAGGATaGAGGAGGAAGCCGGGCAAG +
Preference number: 4 (lower is better)
Translates to: RAAPRDEGIFGLGRIMRTSRSPG*RRKPGK
Trigger: CTTGCCCGGCTTCCTCCTCCATCCTGGTGAACGGGA...TGTCCTCATTATCCGGCCCAGACCAAAGATTCCCTCATCCCTGGGGGCAGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR CCA 90 bp TCCGCTTCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGGAGGTGGGTACTACCTaGGGCAGGTTCAATAGTGGG +
Preference number: 4 (lower is better)
Translates to: SASSSPSVPALSSSPADQEVGTT*GRFNSG
Trigger: CCCACTATTGAACCTGCCCCAGGTAGTACCCACCTC...CTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAGCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR CCA 90 bp GAAGGCAGCTGCAGGGCAGTCACGCCCACCCCGGAGTTGATGAGGTGCACATTGTGCCAGACACAGGGTTaGCCAGGAGGAAGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: EGSCRAVTPTPELMRCTLCQTQG*PGGSFL
Trigger: CAGGAAACTTCCTCCTGGCCAACCCTGTGTCTGGCA...CAATGTGCACCTCATCAACTCCGGGGTGGGCGTGACTGCCCTGCAGCTGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR CCA 90 bp CCAGCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCGTCTCTGGCTTCAGTaGCAGGGCCAGGCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: PAIGRAINSVSGSDRERARLWLQ*QGQAGG
Trigger: GCCCCCGGCCTGGCCCTGCCACTGAAGCCAGAGACG...AGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560160.1
CDS-3UTR CCA 90 bp GAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGGCTGGAAAGCCTCAGCACGGTGTaGGGGGCCTGTGTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: ELLIVFQGVTGRGLWGLESLSTV*GACVPS
Trigger: GCTGGGGACACAGGCCCCCCACACCGTGCTGAGGCT...TTCCAGCCCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp CTGGAGCTGGGTCAGAACCTTGGCCTCAGCTTCCAACCCCTCGTCAACCTCACCGCTGGGTCAGAACCTTaGCCTCAGCTTCCAACCCCT +
Preference number: 4 (lower is better)
Translates to: LELGQNLGLSFQPLVNLTAGSEP*PQLPTP
Trigger: AGGGGTTGGAAGCTGAGGCCAAGGTTCTGACCCAGC...GGTGAGGTTGACGAGGGGTTGGAAGCTGAGGCCAAGGTTCTGACCCAGCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560160.1
ENST00000560168.1
CDS-3UTR CCA 90 bp GACCCTGAGTCCCCCACGTATATGGCAGGGCACAGCATGGGGAGGGCTGTAACATCCACAGGCACCGACTaGAGCTGGGTCAGAACCTTG +
Preference number: 4 (lower is better)
Translates to: DPESPTYMAGHSMGRAVTSTGTD*SWVRTL
Trigger: CAAGGTTCTGACCCAGCTCCAGTCGGTGCCTGTGGA...TGTTACAGCCCTCCCCATGCTGTGCCCTGCCATATACGTGGGGGACTCAGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp CCTGTCCTCCACCTTCGGATTCCAGGCAGTTGTGACAACACCAGCTATCGGCAGCTGGAAGTCCGGCCCTaGGGCAGGGTGTTCCGCTTA +
Preference number: 4 (lower is better)
Translates to: PVLHLRIPGSCDNTSYRQLEVRP*GRVFRL
Trigger: TAAGCGGAACACCCTGCCCCAGGGCCGGACTTCCAG...CTGCCGATAGCTGGTGTTGTCACAACTGCCTGGAATCCGAAGGTGGAGGACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp CTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGAGGGCTCTGGGGGCTaGAAGTCCGGCCCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: LSAELLIVFQGVTGRGLWEGSGG*KSGPGA
Trigger: TGCCCCAGGGCCGGACTTCCAGCCCCCAGAGCCCTC...CCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp CCGCTTCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGACAGGAAATGCCACACTaGGGAGGGTCTCCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: PLPAAPLFLRLVPALLTRQEMPH*GGSPVS
Trigger: TGAGACTGGAGACCCTCCCCAGTGTGGCATTTCCTG...TCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560160.1
CDS-3UTR TCA 90 bp GCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGAGGGTGCCTAGGGCGTaGGCCTCTGGGAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: AIGRAINSVSGSDRERALRVPRA*ASGRAG
Trigger: CCCTGCTCTCCCAGAGGCTCACGCCCTAGGCACCCT...CAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR GCA 90 bp ATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGGCAGGCCTTGAGCGCTaGGCGGGAGCGCTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: IGRAINSVSGSDRERALGAGLER*AGALLE
Trigger: TTCAAGGAGCGCTCCCGCGCAGCGCTCAAGGCCTGC...CCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560160.1
CDS-3UTR CCA 90 bp AGGGCTGCCCCCAGGGATGAGGGAATCTTTGGTCTGGGCCGGATAATGAGGACAAAAGTCTGCAAGAGCTaGCGCGCTTCCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RAAPRDEGIFGLGRIMRTKVCKS*RASSSS
Trigger: GGAGGAGGAGGAAGCGCGCCAGCTCTTGCAGACTTT...TGTCCTCATTATCCGGCCCAGACCAAAGATTCCCTCATCCCTGGGGGCAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR CCA 90 bp ACCTTCGGATTCCAGGCAGTTGTGACAACACCAGCTATCGGCAGAGCTATTAATGCGTACTCGCCCCGCTaGAAGGCCACCAGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: TFGFQAVVTTPAIGRAINAYSPR*KATRAR
Trigger: GCGGGCCCTGGTGGCCTTCCAGCGGGGCGAGTACGC...ATTAATAGCTCTGCCGATAGCTGGTGTTGTCACAACTGCCTGGAATCCGAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560160.1
CDS-3UTR CCA 90 bp AGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGGCTGGAAGGAATATGGAGCCCTaGGCAGCGGCCTCGGCGGAC +
Preference number: 4 (lower is better)
Translates to: RAINSVSGSDRERALGAGRNMEP*AAASAD
Trigger: GTCCGCCGAGGCCGCTGCCCAGGGCTCCATATTCCT...TCCAGCCCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR CCA 90 bp ATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGGGGATACCCCGGGGGTaGGGAGAGCGGTACCACTTG +
Preference number: 4 (lower is better)
Translates to: IGRAINSVSGSDRERALGGIPRG*GERYHL
Trigger: CAAGTGGTACCGCTCTCCCCACCCCCGGGGTATCCC...CCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGAT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR CCA 90 bp GCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGCATCAGCCCCTCTGGTaGGGGCGCCGGGAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: AIGRAINSVSGSDRERALHQPLW*GRREVG
Trigger: CCCAACTTCCCGGCGCCCCCACCAGAGGGGCTGATG...CAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp AGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGGCTGGACTCAGGGTCGGGGTCTaGCAGCCTCAGCACGGTGTG +
Preference number: 4 (lower is better)
Translates to: RAINSVSGSDRERALGAGLRVGV*QPQHGV
Trigger: CACACCGTGCTGAGGCTGCCAGACCCCGACCCTGAG...TCCAGCCCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp GCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGGCTGGCCACGGGGCCACACTaGGTCACAGTTCCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: AELLIVFQGVTGRGLWGLATGPH*VTVPRA
Trigger: AGCCCTTGGAACTGTGACCCAGTGTGGCCCCGTGGC...CAGCCCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp TCCTCCACCTTCGGATTCCAGGCAGTTGTGACAACACCAGCTATCGGCAGAGCTGACCTGGACAGGAGGTaGCCGGGGATACAACCCCCA +
Preference number: 4 (lower is better)
Translates to: SSTFGFQAVVTTPAIGRADLDRR*PGIQPP
Trigger: TGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGTC...AGCTCTGCCGATAGCTGGTGTTGTCACAACTGCCTGGAATCCGAAGGTGGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp GCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGACAGGGAGAGGGCTCTaGGGGCTGGAAGTCCGGCCC +
Preference number: 4 (lower is better)
Translates to: AIGRAINSVSGSDRERALTGRGL*GLEVRP
Trigger: GGGCCGGACTTCCAGCCCCCAGAGCCCTCTCCCTGT...CAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR TCA 90 bp GTTGTGACAACACCAGCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACGTCTCGCTGGCCCCCTaGGGGCTGGGCTGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: VVTTPAIGRAINSVSGSDVSLAP*GLGCGG
Trigger: TCCACCGCAGCCCAGCCCTCAGGGGGCCAGCGAGAC...GTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAGCTGGTGTTGTCACAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR TCA 90 bp CCAGCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTGTCGAGGGGAGCTGGTaGAGGAAGACCCCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: PAIGRAINSVSGSDRERAVEGSW*RKTPVS
Trigger: GGAGACGGGGGTCTTCCTTCACCAGCTCCCCTCGAC...AGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR GCA 90 bp CCAGCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTGGGAGGGCCGGTCCCTaGCAGGAATATGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: PAIGRAINSVSGSDRERAGRAGP*QEYGAL
Trigger: CAGGGCTCCATATTCCTGGCAGGGACCGGCCCTCCC...AGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR GCA 90 bp ATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGGCCCCTGGCAGGAAATaGCACACTGGGGAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: IGRAINSVSGSDRERALGAPGRK*HTGEGL
Trigger: GAGACCCTCCCCAGTGTGGCATTTCCTGCCAGGGGC...CCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp TCCTCCACCTTCGGATTCCAGGCAGTTGTGACAACACCAGCTATCGGCAGAGCTTCTCGATCTTCTTTCTaGCCGACCCTGCGCCCCACG +
Preference number: 4 (lower is better)
Translates to: SSTFGFQAVVTTPAIGRASRSSF*PTLRPT
Trigger: CGTGGGGCGCAGGGTCGGCCAGAAAGAAGATCGAGA...AGCTCTGCCGATAGCTGGTGTTGTCACAACTGCCTGGAATCCGAAGGTGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000622857.1
CDS-3UTR CCA 90 bp GGCAGGGTGTTCCGCTTACAGCTAGTACCAAGTGGAGGGGGCAGGGCCCCTGAGCATGTTTTGCAACTTTaGGAAGTTCCTCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: GRVFRLQLVPSGGGRAPEHVLQL*EVPPSL
Trigger: GAGGGAGGGAGGAACTTCCCAAAGTTGCAAAACATG...CTCAGGGGCCCTGCCCCCTCCACTTGGTACTAGCTGTAAGCGGAACACCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000622857.1
CDS-3UTR CCA 90 bp GCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGGCTGCCTCAGGCACGGAGATaGCCGTCTCTGGCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: AELLIVFQGVTGRGLWGLPQARR*PSLASV
Trigger: CACTGAAGCCAGAGACGGCCATCTCCGTGCCTGAGG...CAGCCCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560160.1
CDS-3UTR CCA 90 bp AGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGGCTGGACAACATCAGCCCCTCTaGTGGGGGCGCCGGGAAGTT +
Preference number: 4 (lower is better)
Translates to: RAINSVSGSDRERALGAGQHQPL*WGRREV
Trigger: AACTTCCCGGCGCCCCCACCAGAGGGGCTGATGTTG...TCCAGCCCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp CCAGCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTCAGGGTCGGGGTCTaGCAGCCTCAGCACGGTGTG +
Preference number: 4 (lower is better)
Translates to: PAIGRAINSVSGSDRERALRVGV*QPQHGV
Trigger: CACACCGTGCTGAGGCTGCCAGACCCCGACCCTGAG...AGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp CCTGTCCTCCACCTTCGGATTCCAGGCAGTTGTGACAACACCAGCTATCGGCAGTCCACAGGCACCGACTaGAGCTGGGTCAGAACCTTG +
Preference number: 4 (lower is better)
Translates to: PVLHLRIPGSCDNTSYRQSTGTD*SWVRTL
Trigger: CAAGGTTCTGACCCAGCTCCAGTCGGTGCCTGTGGA...CTGCCGATAGCTGGTGTTGTCACAACTGCCTGGAATCCGAAGGTGGAGGACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp GAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGGCTGGAAAGCACCACCAGGGCTTaGAGAGGCCACCCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: ELLIVFQGVTGRGLWGLESTTRA*RGHPGR
Trigger: TCTGCCTGGGTGGCCTCTCCAAGCCCTGGTGGTGCT...TTCCAGCCCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp CCTGTCCTCCACCTTCGGATTCCAGGCAGTTGTGACAACACCAGCTATCGGCAGGGAGATGGCCGTCTCTaGCTTCAGAGGCAAGGTAGC +
Preference number: 4 (lower is better)
Translates to: PVLHLRIPGSCDNTSYRQGDGRL*LQRQGS
Trigger: GCTACCTTGCCTCTGAAGCCAGAGACGGCCATCTCC...CTGCCGATAGCTGGTGTTGTCACAACTGCCTGGAATCCGAAGGTGGAGGACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622857.1
CDS-3UTR TCA 90 bp GCAGTTGTGACAACACCAGCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTTCAGGGGCCTCCGACTaGGCCTCCTCCAGCCGCACC +
Preference number: 4 (lower is better)
Translates to: AVVTTPAIGRAINSVSGSSGASD*ASSSRT
Trigger: GGTGCGGCTGGAGGAGGCTCAGTCGGAGGCCCCTGA...ACTCCCTGAAACACTATTAATAGCTCTGCCGATAGCTGGTGTTGTCACAACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR TCA 90 bp CTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGCTGCCCCCAGGGATaGGGGAATCTTTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: LSAELLIVFQGVTGRGLWGCPQG*GNLWSG
Trigger: CCCAGACCAAAGATTCCCTCATCCCTGGGGGCAGCC...CCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000622857.1
CDS-3UTR GCA 90 bp CCCTGGGGCAGGGTGTTCCGCTTACAGCTAGTACCAAGTGGAGGGGGCAGGGCCAAGGTAGCCATGTTTTaGAACTTTGGGAAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: PWGRVFRLQLVPSGGGRAKVAMF*NFGKFL
Trigger: GAGGAACTTCCCAAAGTTGCAAAACATGGCTACCTT...GGCCCTGCCCCCTCCACTTGGTACTAGCTGTAAGCGGAACACCCTGCCCCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000622857.1
CDS-3UTR CCA 90 bp GAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGGCTGGAACCCAGCGTGTGCTTCTaGCTCAGGGCCTCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: ELLIVFQGVTGRGLWGLEPSVCF*LRASVS
Trigger: GGAAACTGAGGCCCTGAGCCAGAAGCACACGCTGGG...TTCCAGCCCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR CCA 90 bp CTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGTCCCTGCCAGGAATATaGAGCCCTGGGCAGCGGCCT +
Preference number: 4 (lower is better)
Translates to: LSAELLIVFQGVTGRGLWSLPGI*SPGQRP
Trigger: AGGCCGCTGCCCAGGGCTCCATATTCCTGGCAGGGA...CCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR CCA 90 bp CCTGTCCTCCACCTTCGGATTCCAGGCAGTTGTGACAACACCAGCTATCGGCAGGAGGTGGGTACTACCTaGGGCAGGTTCAATAGTGGG +
Preference number: 4 (lower is better)
Translates to: PVLHLRIPGSCDNTSYRQEVGTT*GRFNSG
Trigger: CCCACTATTGAACCTGCCCCAGGTAGTACCCACCTC...CTGCCGATAGCTGGTGTTGTCACAACTGCCTGGAATCCGAAGGTGGAGGACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR CCA 90 bp CTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGAGATGGCCGTCTCTaGCTTCAGTGGCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LSAELLIVFQGVTGRGLWGDGRL*LQWQGQ
Trigger: CTGGCCCTGCCACTGAAGCCAGAGACGGCCATCTCC...CCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560160.1
CDS-3UTR CCA 90 bp AGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGGCTGGACCTCAGGCACGGAGATaGCCGTCTCTGGCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: RAINSVSGSDRERALGAGPQARR*PSLASV
Trigger: CACTGAAGCCAGAGACGGCCATCTCCGTGCCTGAGG...TCCAGCCCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560160.1
CDS-3UTR CCA 90 bp GCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGCAACATCAGCCCCTCTaGTGGGGGCGCCGGGAAGTT +
Preference number: 4 (lower is better)
Translates to: AIGRAINSVSGSDRERALQHQPL*WGRREV
Trigger: AACTTCCCGGCGCCCCCACCAGAGGGGCTGATGTTG...CAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp TCCTCCACCTTCGGATTCCAGGCAGTTGTGACAACACCAGCTATCGGCAGAGCTCCATCCAAAGGGGGATaGAGACCTGGACAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SSTFGFQAVVTTPAIGRAPSKGG*RPGQEV
Trigger: CACCTCCTGTCCAGGTCTCCATCCCCCTTTGGATGG...AGCTCTGCCGATAGCTGGTGTTGTCACAACTGCCTGGAATCCGAAGGTGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp GCAGTTGTGACAACACCAGCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGAGGGCTCTGGGGGCTaGAAGTCCGGCCCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: AVVTTPAIGRAINSVSGSEGSGG*KSGPGA
Trigger: TGCCCCAGGGCCGGACTTCCAGCCCCCAGAGCCCTC...ACTCCCTGAAACACTATTAATAGCTCTGCCGATAGCTGGTGTTGTCACAACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR TCA 90 bp GCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGCCTGAGTCAGGACCCTaGGTCCCCCACGTATATGGC +
Preference number: 4 (lower is better)
Translates to: AIGRAINSVSGSDRERALPESGP*VPHVYG
Trigger: GCCATATACGTGGGGGACTCAGGGTCCTGACTCAGG...CAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp ATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGAGTCCCCCACGTATATaGCAGGGCACAGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: IGRAINSVSGSDRERALGSPPRI*QGTAWG
Trigger: TCCCCATGCTGTGCCCTGCCATATACGTGGGGGACT...CCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp GCAGTTGTGACAACACCAGCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTAGGTCTTGGTCTCGCTaGCCCCCTGAGGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: AVVTTPAIGRAINSVSGSRSWSR*PPEGWA
Trigger: AGCCCAGCCCTCAGGGGGCCAGCGAGACCAAGACCT...ACTCCCTGAAACACTATTAATAGCTCTGCCGATAGCTGGTGTTGTCACAACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR CCA 90 bp ATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGTGCCAGACACAGGGTTaGCCAGGAGGAAGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: IGRAINSVSGSDRERALGCQTQG*PGGSFL
Trigger: CAGGAAACTTCCTCCTGGCCAACCCTGTGTCTGGCA...CCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR CCA 90 bp AGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGGCTGGACAGGAAATGCCACACTaGGGAGGGTCTCCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: RAINSVSGSDRERALGAGQEMPH*GGSPVS
Trigger: TGAGACTGGAGACCCTCCCCAGTGTGGCATTTCCTG...TCCAGCCCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR TCA 90 bp ACCTTCGGATTCCAGGCAGTTGTGACAACACCAGCTATCGGCAGAGCTATTAATCGCGGGAGCGCTCCTTaGAGCAGTAGACTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: TFGFQAVVTTPAIGRAINRGSAP*SSRLSP
Trigger: AGGAGACAGTCTACTGCTTCAAGGAGCGCTCCCGCG...ATTAATAGCTCTGCCGATAGCTGGTGTTGTCACAACTGCCTGGAATCCGAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560160.1
CDS-3UTR TCA 90 bp GAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGGCTGGAAGATTCCAGGCAGTTGTaGCAACACCAGCTATCGGCA +
Preference number: 4 (lower is better)
Translates to: ELLIVFQGVTGRGLWGLEDSRQL*QHQLSA
Trigger: TGCCGATAGCTGGTGTTGTCACAACTGCCTGGAATC...TTCCAGCCCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR GCA 90 bp ACCTTCGGATTCCAGGCAGTTGTGACAACACCAGCTATCGGCAGAGCTATTAATGCTGTGCAGAAAGGGTaGCTAGGGCGTGAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: TFGFQAVVTTPAIGRAINAVQKG*LGREPL
Trigger: CAGAGGCTCACGCCCTAGGCACCCTTTCTGCACAGC...ATTAATAGCTCTGCCGATAGCTGGTGTTGTCACAACTGCCTGGAATCCGAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp AGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGGCTGGAGAAGGATGTGGTGACTaGGGTCTTCAGCAACCGCAT +
Preference number: 4 (lower is better)
Translates to: RAINSVSGSDRERALGAGEGCGD*GLQQPH
Trigger: ATGCGGTTGCTGAAGACCCCAGTCACCACATCCTTC...TCCAGCCCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp GTTGTGACAACACCAGCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACGACCTGGACAGGAGGTaGCCGGGGATACAACCCCCA +
Preference number: 4 (lower is better)
Translates to: VVTTPAIGRAINSVSGSDDLDRR*PGIQPP
Trigger: TGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGTC...GTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAGCTGGTGTTGTCACAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR GCA 90 bp GCAGTTGTGACAACACCAGCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGCTGTGCAGAAAGGGTaGCTAGGGCGTGAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: AVVTTPAIGRAINSVSGSAVQKG*LGREPL
Trigger: CAGAGGCTCACGCCCTAGGCACCCTTTCTGCACAGC...ACTCCCTGAAACACTATTAATAGCTCTGCCGATAGCTGGTGTTGTCACAACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CCA 90 bp GCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGAAGGATGTGGTGACTaGGGTCTTCAGCAACCGCAT +
Preference number: 4 (lower is better)
Translates to: AIGRAINSVSGSDRERALEGCGD*GLQQPH
Trigger: ATGCGGTTGCTGAAGACCCCAGTCACCACATCCTTC...CAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR TCA 90 bp GCAGTTGTGACAACACCAGCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGATTCCAGGCAGTTGTaGCAACACCAGCTATCGGCA +
Preference number: 4 (lower is better)
Translates to: AVVTTPAIGRAINSVSGSDSRQL*QHQLSA
Trigger: TGCCGATAGCTGGTGTTGTCACAACTGCCTGGAATC...ACTCCCTGAAACACTATTAATAGCTCTGCCGATAGCTGGTGTTGTCACAACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR GCA 90 bp AGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGGCTGGAAAGGTAGCCATGTTTTaGAACTTTGGGAAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: RAINSVSGSDRERALGAGKVAMF*NFGKFL
Trigger: GAGGAACTTCCCAAAGTTGCAAAACATGGCTACCTT...TCCAGCCCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000622857.1
CDS GCA 90 bp CCCGCCCCGGCCCCGGCCGCCGCCGCCGCCTCACCCTCGGCCGCCTaGAAAGTCTGCAAGAGCTGGCGCGCTTCCTCCTCCTCCTCTTCG +
Preference number: 5 (lower is better)
Translates to: PAPAPAAAAASPSAA*KVCKSWRASSSSSS
Trigger: CGAAGAGGAGGAGGAGGAAGCGCGCCAGCTCTTGCAGACTTTGCAGGCGGCCGAGGGTGAGGCGGCGGCGGCGGCCGGGGCCGGGGCGGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR CAA 90 bp AAGGGCTGGTCCCGGAGCAGCCACCTGGGCCCCTTTGGTCTCAGGGGCCTCCGACCATCAGACTCGCTCTaGCAGGGCGCGCCGCCTCCG +
Preference number: 5 (lower is better)
Translates to: KGWSRSSHLGPFGLRGLRPSDSL*QGAPPP
Trigger: CGGAGGCGGCGCGCCCTGCAAGAGCGAGTCTGATGG...TCGGAGGCCCCTGAGACCAAAGGGGCCCAGGTGGCTGCTCCGGGACCAGCCCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR CAA 90 bp CCAAGGGCTGGTCCCGGAGCAGCCACCTGGGCCCCTTTGGTCTCAGGGGCCTCCGCCTTGTGGTGGGCCTaGGGGCACTGGGACTTGCCA +
Preference number: 5 (lower is better)
Translates to: PRAGPGAATWAPLVSGASALWWA*GHWDLP
Trigger: TGGCAAGTCCCAGTGCCCCAAGGCCCACCACAAGGC...GGAGGCCCCTGAGACCAAAGGGGCCCAGGTGGCTGCTCCGGGACCAGCCCTTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR CAA 90 bp CGGGGCCACACTGGGTCACAGTTCCAAGGGCTCCTCCACAGGCACCGACTGGAGGCCACCTGGGCCCCTTaGGTCTCAGGGGCCTCCGAC +
Preference number: 5 (lower is better)
Translates to: RGHTGSQFQGLLHRHRLEATWAP*VSGASD
Trigger: GTCGGAGGCCCCTGAGACCAAAGGGGCCCAGGTGGC...CTCCAGTCGGTGCCTGTGGAGGAGCCCTTGGAACTGTGACCCAGTGTGGCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR CAA 90 bp CCCCCTCCCATTCCTGTCCCTGCGTCTTCAGCACCAATGTCGGGAGAGGCCACGCCATCAGACTCGCTCTaGCAGGGCGCGCCGCCTCCG +
Preference number: 5 (lower is better)
Translates to: PPPIPVPASSAPMSGEATPSDSL*QGAPPP
Trigger: CGGAGGCGGCGCGCCCTGCAAGAGCGAGTCTGATGG...CGTGGCCTCTCCCGACATTGGTGCTGAAGACGCAGGGACAGGAATGGGAGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560168.1
CDS-3UTR CAA 90 bp GTCAGGACCCTGAGTCCCCCACGTATATGGCAGGGCACAGCATGGGGAGGGCTGGCCACCTGGGCCCCTTaGGTCTCAGGGGCCTCCGAC +
Preference number: 5 (lower is better)
Translates to: VRTLSPPRIWQGTAWGGLATWAP*VSGASD
Trigger: GTCGGAGGCCCCTGAGACCAAAGGGGCCCAGGTGGC...CAGCCCTCCCCATGCTGTGCCCTGCCATATACGTGGGGGACTCAGGGTCCTGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR CAA 90 bp CTGGAGCTGGGTCAGAACCTTGGCCTCAGCTTCCAACCCCTCGTCAACCTCACCCGGGCGGAGGGAGCCTaGTGGTGGGCCTTGGGGCAC +
Preference number: 5 (lower is better)
Translates to: LELGQNLGLSFQPLVNLTRAEGA*WWALGH
Trigger: GTGCCCCAAGGCCCACCACAAGGCTCCCTCCGCCCG...GGTGAGGTTGACGAGGGGTTGGAAGCTGAGGCCAAGGTTCTGACCCAGCTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR CAA 90 bp TCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGACAGGCGGAGGAAGTTTCCTCTaGCAGGGCGCGCCGCCTCCG +
Preference number: 5 (lower is better)
Translates to: SSSPSVPALSSSPADQTGGGSFL*QGAPPP
Trigger: CGGAGGCGGCGCGCCCTGCAAGAGGAAACTTCCTCC...GCCTGTCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560160.1
CDS CCA 90 bp CGGACACTGGGGCCGCCCCTCTCTCCAGGTCCTCAGGACTTCGGCTaGACTCGTCCTCAGTCGTGGGATTCCCATCAGACTCGCTCTTGC +
Preference number: 5 (lower is better)
Translates to: RTLGPPLSPGPQDFG*TRPQSWDSHQTRSC
Trigger: GCAAGAGCGAGTCTGATGGGAATCCCACGACTGAGGACGAGTCCAGCCGAAGTCCTGAGGACCTGGAGAGAGGGGCGGCCCCAGTGTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560168.1
CDS-3UTR CAA 90 bp TCCGCTTCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGGGAGAGCGGTACCACTaGTGGGGCAGCCACAGCAGG +
Preference number: 5 (lower is better)
Translates to: SASSSPSVPALSSSPADQGERYH*WGSHSR
Trigger: CCTGCTGTGGCTGCCCCACAAGTGGTACCGCTCTCC...CTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAGCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR CAA 90 bp CCTGTCCCTGCGTCTTCAGCACCAATGTCGGGAGAGGCCACGGGGCCACACTGGACGCCCACCCCGGAGTaGATGAGGTGCACATTGGCA +
Preference number: 5 (lower is better)
Translates to: PVPASSAPMSGEATGPHWTPTPE*MRCTLA
Trigger: TGCCAATGTGCACCTCATCAACTCCGGGGTGGGCGT...CCAGTGTGGCCCCGTGGCCTCTCCCGACATTGGTGCTGAAGACGCAGGGACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560168.1
CDS-3UTR CAA 90 bp GGAGACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGCTTAGCTGGGTCAGAACCTaGGCCTCAGCTTCCAACCCC +
Preference number: 5 (lower is better)
Translates to: GDLDRRWPGIQPPAPPGLSWVRT*ASASNP
Trigger: GGGGTTGGAAGCTGAGGCCAAGGTTCTGACCCAGCT...AAGCCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CAA 90 bp GCCACACTGGGTCACAGTTCCAAGGGCTCCTCCACAGGCACCGACTGGAGCTGGAGCTGGGTCAGAACCTaGGCCTCAGCTTCCAACCCC +
Preference number: 5 (lower is better)
Translates to: ATLGHSSKGSSTGTDWSWSWVRT*ASASNP
Trigger: GGGGTTGGAAGCTGAGGCCAAGGTTCTGACCCAGCT...CCAGCTCCAGTCGGTGCCTGTGGAGGAGCCCTTGGAACTGTGACCCAGTGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560160.1
ENST00000560168.1
CDS-3UTR CAA 90 bp GAAGGCAGCTGCAGGGCAGTCACGCCCACCCCGGAGTTGATGAGGTGCACATTGCGGTTCTTGAACCAGTaGCTGACCCTCGGCCGCCTG +
Preference number: 5 (lower is better)
Translates to: EGSCRAVTPTPELMRCTLRFLNQ*LTLGRL
Trigger: CAGGCGGCCGAGGGTCAGCAACTGGTTCAAGAACCG...CAATGTGCACCTCATCAACTCCGGGGTGGGCGTGACTGCCCTGCAGCTGCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR CAA 90 bp CACACTGGGTCACAGTTCCAAGGGCTCCTCCACAGGCACCGACTGGAGCTGGGTTTGGGGCACTGGGACTaGCCAGGGATGAGATGCCCT +
Preference number: 5 (lower is better)
Translates to: HTGSQFQGLLHRHRLELGLGHWD*PGMRCP
Trigger: AGGGCATCTCATCCCTGGCAAGTCCCAGTGCCCCAA...ACCCAGCTCCAGTCGGTGCCTGTGGAGGAGCCCTTGGAACTGTGACCCAGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR CAA 90 bp TCCGCTTCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGTTGATGAGGTGCACATaGGCAGGGCCTGCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: SASSSPSVPALSSSPADQLMRCT*AGPAAA
Trigger: AGCTGCAGCAGGCCCTGCCAATGTGCACCTCATCAA...CTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGAAGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560168.1
CDS-3UTR CAA 90 bp TCCAGCAGCCCCTCTGTTCCTGCGCTTAGTTCCAGCCCTGCTGACCAGACAGGCAATGAGGACAAGGGCTaGAGTCGAGGGGAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: SSSPSVPALSSSPADQTGNEDKG*SRGELV
Trigger: CACCAGCTCCCCTCGACTCAAGCCCTTGTCCTCATT...GCCTGTCTGGTCAGCAGGGCTGGAACTAAGCGCAGGAACAGAGGGGCTGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560160.1
CDS-3UTR CAA 90 bp GACCCTGAGTCCCCCACGTATATGGCAGGGCACAGCATGGGGAGGGCTGTAACAAATGAGGACAAGGGCTaGAGTCGAGGGGAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: DPESPTYMAGHSMGRAVTNEDKG*SRGELV
Trigger: CACCAGCTCCCCTCGACTCAAGCCCTTGTCCTCATT...TGTTACAGCCCTCCCCATGCTGTGCCCTGCCATATACGTGGGGGACTCAGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CAA 90 bp CCTGTCCTCCACCTTCGGATTCCAGGCAGTTGTGACAACACCAGCTATCGGCAGTTGCGCAGTCGATACTaGTCCACTGCGCCAAGCGCG +
Preference number: 5 (lower is better)
Translates to: PVLHLRIPGSCDNTSYRQLRSRY*STAPSA
Trigger: CGCGCTTGGCGCAGTGGACAAGTATCGACTGCGCAA...CTGCCGATAGCTGGTGTTGTCACAACTGCCTGGAATCCGAAGGTGGAGGACAGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560160.1
CDS-3UTR CAA 90 bp ACCTGGACAGGAGGTGGCCGGGGATACAACCCCCAGCACCACCAGGGCTTGGAGCAAGGTAGCCATGTTTaGCAACTTTGGGAAGTTCCT +
Preference number: 5 (lower is better)
Translates to: TWTGGGRGYNPQHHQGLEQGSHV*QLWEVP
Trigger: AGGAACTTCCCAAAGTTGCAAAACATGGCTACCTTG...CTCCAAGCCCTGGTGGTGCTGGGGGTTGTATCCCCGGCCACCTCCTGTCCAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000622857.1
CDS-3UTR CAA 90 bp GCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGAGAGCGGTACCACTaGTGGGGCAGCCACAGCAGG +
Preference number: 5 (lower is better)
Translates to: AIGRAINSVSGSDRERALGERYH*WGSHSR
Trigger: CCTGCTGTGGCTGCCCCACAAGTGGTACCGCTCTCC...CAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR CAA 90 bp ATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGAGCTGGGTCAGAACCTaGGCCTCAGCTTCCAACCCC +
Preference number: 5 (lower is better)
Translates to: IGRAINSVSGSDRERALGSWVRT*ASASNP
Trigger: GGGGTTGGAAGCTGAGGCCAAGGTTCTGACCCAGCT...CCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CAA 90 bp GCCCCCAGGGATGAGGGAATCTTTGGTCTGGGCCGGATAATGAGGACAAGGGCTCCATGTTTTGCAACTTaGGGAAGTTCCTCCCTCCCT +
Preference number: 5 (lower is better)
Translates to: APRDEGIFGLGRIMRTRAPCFAT*GSSSLP
Trigger: AGGGAGGGAGGAACTTCCCAAAGTTGCAAAACATGG...AGCCCTTGTCCTCATTATCCGGCCCAGACCAAAGATTCCCTCATCCCTGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000622857.1
CDS-3UTR CAA 90 bp ATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGTTGATGAGGTGCACATaGGCAGGGCCTGCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: IGRAINSVSGSDRERALGLMRCT*AGPAAA
Trigger: AGCTGCAGCAGGCCCTGCCAATGTGCACCTCATCAA...CCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR CAA 90 bp GCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGAGCTGGGTCAGAACCTaGGCCTCAGCTTCCAACCCC +
Preference number: 5 (lower is better)
Translates to: AIGRAINSVSGSDRERALSWVRT*ASASNP
Trigger: GGGGTTGGAAGCTGAGGCCAAGGTTCTGACCCAGCT...CAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CAA 90 bp GCCCCCAGGGATGAGGGAATCTTTGGTCTGGGCCGGATAATGAGGACAAGGGCTCAAGGTAGCCATGTTTaGCAACTTTGGGAAGTTCCT +
Preference number: 5 (lower is better)
Translates to: APRDEGIFGLGRIMRTRAQGSHV*QLWEVP
Trigger: AGGAACTTCCCAAAGTTGCAAAACATGGCTACCTTG...AGCCCTTGTCCTCATTATCCGGCCCAGACCAAAGATTCCCTCATCCCTGGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000622857.1
CDS-3UTR CAA 90 bp GAGCTATTAATAGTGTTTCAGGGAGTGACAGGGAGAGGGCTCTGGGGGCTGGAACCATGTTTTGCAACTTaGGGAAGTTCCTCCCTCCCT +
Preference number: 5 (lower is better)
Translates to: ELLIVFQGVTGRGLWGLEPCFAT*GSSSLP
Trigger: AGGGAGGGAGGAACTTCCCAAAGTTGCAAAACATGG...TTCCAGCCCCCAGAGCCCTCTCCCTGTCACTCCCTGAAACACTATTAATAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000622857.1
CDS-3UTR CAA 90 bp GCAGTTGTGACAACACCAGCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTTTGCGCAGTCGATACTaGTCCACTGCGCCAAGCGCG +
Preference number: 5 (lower is better)
Translates to: AVVTTPAIGRAINSVSGSLRSRY*STAPSA
Trigger: CGCGCTTGGCGCAGTGGACAAGTATCGACTGCGCAA...ACTCCCTGAAACACTATTAATAGCTCTGCCGATAGCTGGTGTTGTCACAACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560160.1
CDS-3UTR CAA 90 bp GCAGTTGTGACAACACCAGCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTACGCCCACCCCGGAGTaGATGAGGTGCACATTGGCA +
Preference number: 5 (lower is better)
Translates to: AVVTTPAIGRAINSVSGSTPTPE*MRCTLA
Trigger: TGCCAATGTGCACCTCATCAACTCCGGGGTGGGCGT...ACTCCCTGAAACACTATTAATAGCTCTGCCGATAGCTGGTGTTGTCACAACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS-3UTR CAA 90 bp GTTGTGACAACACCAGCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACAATGAGGACAAGGGCTaGAGTCGAGGGGAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: VVTTPAIGRAINSVSGSDNEDKG*SRGELV
Trigger: CACCAGCTCCCCTCGACTCAAGCCCTTGTCCTCATT...GTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAGCTGGTGTTGTCACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317578.7
ENST00000560160.1
ENST00000622857.1
CDS-3UTR CAA 90 bp GTTGTGACAACACCAGCTATCGGCAGAGCTATTAATAGTGTTTCAGGGAGTGACTCTGTGATTCTCCCTTaGTTTTCCCTCCGCCTCTGG +
Preference number: 5 (lower is better)
Translates to: VVTTPAIGRAINSVSGSDSVILP*FSLRLW
Trigger: CCAGAGGCGGAGGGAAAACAAAGGGAGAATCACAGA...GTCACTCCCTGAAACACTATTAATAGCTCTGCCGATAGCTGGTGTTGTCACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS GCA 72 bp AGGCCACCAGGGCCCGCGCGCGCAACACCGGGTCGCTaGCACGTAGGCGCTCGGCCGGGGGCAGTGCGCCCA +
Preference number: 6 (lower is better)
Translates to: RPPGPARATPGR*HVGARPGAVRP
Trigger: TGGGCGCACTGCCCCCGGCCGAGCGCCTACGTGGCAGCGACCCGGTGTTGCGCGCGCGGGCCCTGGTGGCCT
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560160.1
CDS TCA 72 bp AGGAGGACTAAGGGCGCGAAGCCTCCGCCCCGAGACTaGGCTTCTGCACGCCTCCGTCTCCAGGGTCCTCTG +
Preference number: 6 (lower is better)
Translates to: RRTKGAKPPPRD*ASARLRLQGPL
Trigger: CAGAGGACCCTGGAGACGGAGGCGTGCAGAAGCTCAGTCTCGGGGCGGAGGCTTCGCGCCCTTAGTCCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS GCA 72 bp CTCCCCGCTCTTCTCGATCTTCTTTCTGGCCGACCCTaGGCCCCACGCCGGGAAGGCGAGATCCAGCTCTCC +
Preference number: 6 (lower is better)
Translates to: LPALLDLLSGRP*APRREGEIQLS
Trigger: GGAGAGCTGGATCTCGCCTTCCCGGCGTGGGGCGCAGGGTCGGCCAGAAAGAAGATCGAGAAGAGCGGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000622857.1
CDS GCA 72 bp GGGGTAGCGGTTGCCGCGGTAGCAGGCCTTGAGCGCTaGGCGGGAGCGCTCCTTGAAGCAGTAGACTGTCTC +
Preference number: 6 (lower is better)
Translates to: GVAVAAVAGLER*AGALLEAVDCL
Trigger: GAGACAGTCTACTGCTTCAAGGAGCGCTCCCGCGCAGCGCTCAAGGCCTGCTACCGCGGCAACCGCTACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560160.1
CDS CCA 72 bp CCACACCCGTCACGATGGGGCTGCCAGACACAGGGTTaGCCAGGAGGAAGTTTCCTCTTGCAGGGCGCGCCG +
Preference number: 6 (lower is better)
Translates to: PHPSRWGCQTQG*PGGSFLLQGAP
Trigger: CGGCGCGCCCTGCAAGAGGAAACTTCCTCCTGGCCAACCCTGTGTCTGGCAGCCCCATCGTGACGGGTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560160.1
CDS CAA 72 bp GCCACACCCGTCACGATGGGGCTGCCAGACACAGGGTaGGCCAGGAGGAAGTTTCCTCTTGCAGGGCGCGCC +
Preference number: 6 (lower is better)
Translates to: ATPVTMGLPDTG*ARRKFPLAGRA
Trigger: GGCGCGCCCTGCAAGAGGAAACTTCCTCCTGGCCAACCCTGTGTCTGGCAGCCCCATCGTGACGGGTGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560160.1
CDS GCA 72 bp TGCCCTGCTGCAGGGCCACACCCGTCACGATGGGGCTaGCAGACACAGGGTTGGCCAGGAGGAAGTTTCCTC +
Preference number: 6 (lower is better)
Translates to: CPAAGPHPSRWG*QTQGWPGGSFL
Trigger: GAGGAAACTTCCTCCTGGCCAACCCTGTGTCTGGCAGCCCCATCGTGACGGGTGTGGCCCTGCAGCAGGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560160.1
CDS CCA 72 bp CCACACCCGTCACGATGGGGCTGCCAGACACAGGGTTaGCCAGGAGGAAGTTTCCTGGGGCAGTGGCCGAAG +
Preference number: 6 (lower is better)
Translates to: PHPSRWGCQTQG*PGGSFLGQWPK
Trigger: CTTCGGCCACTGCCCCAGGAAACTTCCTCCTGGCCAACCCTGTGTCTGGCAGCCCCATCGTGACGGGTGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS CAA 72 bp GCCACACCCGTCACGATGGGGCTGCCAGACACAGGGTaGGCCAGGAGGAAGTTTCCTGGGGCAGTGGCCGAA +
Preference number: 6 (lower is better)
Translates to: ATPVTMGLPDTG*ARRKFPGAVAE
Trigger: TTCGGCCACTGCCCCAGGAAACTTCCTCCTGGCCAACCCTGTGTCTGGCAGCCCCATCGTGACGGGTGTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317578.7
CDS CCA 72 bp GGGCCGCCCCTCTCTCCAGGTCCTCAGGACTTCGGCTaGACTCGTCCTCAGTCGTGGGATTCCCATCAGACT +
Preference number: 6 (lower is better)
Translates to: GPPLSPGPQDFG*TRPQSWDSHQT
Trigger: AGTCTGATGGGAATCCCACGACTGAGGACGAGTCCAGCCGAAGTCCTGAGGACCTGGAGAGAGGGGCGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317578.7
ENST00000560168.1