RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SIRT6 (Homo sapiens)

Ensembl gene IDs: ENSG00000077463

Ensembl transcript IDs: ENST00000305232.10, ENST00000337491.7, ENST00000594279.5, ENST00000594341.1, ENST00000595670.5, ENST00000596119.5, ENST00000596298.5, ENST00000597896.5, ENST00000599365.5, ENST00000599394.1, ENST00000600540.5, ENST00000600938.5, ENST00000601069.5, ENST00000601488.5, ENST00000601571.1

Found 573 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCTGGGGAAGCCTGAGCGCACATGGAGCCCGTCCACGTTCTGGCTaGCCAGGAAGCGGAGGAGGCCCACGCGCTCCAGCTGCACCAGCG +
Preference number: 1 (lower is better)
Translates to: PWGSLSAHGARPRSG*PGSGGGPRAPAAPA
Trigger: CGCTGGTGCAGCTGGAGCGCGTGGGCCTCCTCCGCTTCCTGGTCAGCCAGAACGTGGACGGGCTCCATGTGCGCTCAGGCTTCCCCAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR GCA 90 bp CCCCGGCGCTTGGTAGCCAGCGGCAGGTTCCCGCTGGGCCGGATCTaGAGCGATGTACCCAGCGTGATGGACAGGTCGGCGTTCCTGCAG +
Preference number: 1 (lower is better)
Translates to: PRRLVASGRFPLGRI*SDVPSVMDRSAFLQ
Trigger: CTGCAGGAACGCCGACCTGTCCATCACGCTGGGTACATCGCTGCAGATCCGGCCCAGCGGGAACCTGCCGCTGGCTACCAAGCGCCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599365.5
3UTR GCA 90 bp CCCCGGCGCTTGGTAGCCAGCGGCAGGTTCCCGCTGGGCCGGATCTaGAGCGATGTACCCAGCGTGATGGACAGGTCGGCGTTCCTGCTG +
Preference number: 1 (lower is better)
Translates to: PRRLVASGRFPLGRI*SDVPSVMDRSAFLL
Trigger: CAGCAGGAACGCCGACCTGTCCATCACGCTGGGTACATCGCTGCAGATCCGGCCCAGCGGGAACCTGCCGCTGGCTACCAAGCGCCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600938.5
3UTR CCA 90 bp TTGTCCCTGGGGAAGCCTGAGCGCACATGGAGCCCGTCCACGTTCTaGCTGACCAGGAAGCGGAGGAGGCCCACGCGCTCCAGCTGCACC +
Preference number: 1 (lower is better)
Translates to: LSLGKPERTWSPSTF*LTRKRRRPTRSSCT
Trigger: GGTGCAGCTGGAGCGCGTGGGCCTCCTCCGCTTCCTGGTCAGCCAGAACGTGGACGGGCTCCATGTGCGCTCAGGCTTCCCCAGGGACAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR CCA 90 bp CACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGCCTCACCTCTaGACAACACAGCAAGTCAGAGGCTGGGGTGTGGCAGGGGCTCAC +
Preference number: 1 (lower is better)
Translates to: HSCLSWRPGRAQPHL*TTQQVRGWGVAGAH
Trigger: GTGAGCCCCTGCCACACCCCAGCCTCTGACTTGCTGTGTTGTCCAGAGGTGAGGCTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR TCA 90 bp GCGGCCTCCCCGGCGCTTGGTAGCCAGCGGCAGGTTCCCGCTGGGCCGGATCTGGGGGCTGGCGGGCTCTaGGCCGTTGTGCTGGGCGCA +
Preference number: 2 (lower is better)
Translates to: AASPALGSQRQVPAGPDLGAGGL*AVVLGA
Trigger: TGCGCCCAGCACAACGGCTCAGAGCCCGCCAGCCCC...CAGATCCGGCCCAGCGGGAACCTGCCGCTGGCTACCAAGCGCCGGGGAGGCCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR CAA 90 bp GGGCTGGCGGGCTCTGAGCCGTTGTGCTGGGCGCAGGGCTCCTGCTaGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAGATTCC +
Preference number: 2 (lower is better)
Translates to: GLAGSEPLCWAQGSC*GPAGIEPLIRVGDS
Trigger: GGAATCTCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGCGCCCAGCACAACGGCTCAGAGCCCGCCAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR GCA 90 bp GCCCAGGGAGGGACCACGGAGGGCAGGTGTAACCCCTGGCCTGGAGCACAGCTCTGGGCGCAGGGCTCCTaGTTGGGGCCGGCGGGGATA +
Preference number: 2 (lower is better)
Translates to: AQGGTTEGRCNPWPGAQLWAQGS*LGPAGI
Trigger: TATCCCCGCCGGCCCCAAGCAGGAGCCCTGCGCCCA...GAGCTGTGCTCCAGGCCAGGGGTTACACCTGCCCTCCGTGGTCCCTCCCTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR GCA 90 bp GCAGGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAGATGGGCGCAGGGCTCCTaGTTGGGGCCGGCGGGGATA +
Preference number: 2 (lower is better)
Translates to: AGLLLGAGGDRAVDPGGRWAQGS*LGPAGI
Trigger: TATCCCCGCCGGCCCCAAGCAGGAGCCCTGCGCCCA...TCTCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR GCA 90 bp GCAGGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAGAGTGGGTCTCCCCTCCTaGAGGGCCCATGGAGGAGGG +
Preference number: 2 (lower is better)
Translates to: AGLLLGAGGDRAVDPGGRVGLPS*RAHGGG
Trigger: CCCTCCTCCATGGGCCCTGCAGGAGGGGAGACCCAC...TCTCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR GCA 90 bp CCCCCTTGCCTTAGCCACGGTGCAGAGCCGGCCCGTGGCCTTCAGGCCCATGGTCCCACGCGCTCCAGCTaGACCAGCGCCATGTGGGTC +
Preference number: 2 (lower is better)
Translates to: PPCLSHGAEPARGLQAHGPTRSS*TSAMWV
Trigger: GACCCACATGGCGCTGGTGCAGCTGGAGCGCGTGGG...ACCATGGGCCTGAAGGCCACGGGCCGGCTCTGCACCGTGGCTAAGGCAAGGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR CCA 90 bp GGGTGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCCCTTGGGCTCCAGCTTaGGGGTGGGCGGGCGGGGCA +
Preference number: 2 (lower is better)
Translates to: GCGRGSPVTSGVWLLPGTPWAPA*GWAGGA
Trigger: TGCCCCGCCCGCCCACCCCCAAGCTGGAGCCCAAGG...GGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR CAA 90 bp TTGGTGGGCTGCAGGTTGACGATGACCAGGCGGCCTCCCCGGCGCTaGGTAGCCAGCGGCAGGTTCCCGCTGGGCCGGATCTGCAGCGAT +
Preference number: 2 (lower is better)
Translates to: LVGCRLTMTRRPPRR*VASGRFPLGRICSD
Trigger: ATCGCTGCAGATCCGGCCCAGCGGGAACCTGCCGCTGGCTACCAAGCGCCGGGGAGGCCGCCTGGTCATCGTCAACCTGCAGCCCACCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR GCA 90 bp CAGGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAGATGTGGGTCTCCCCTCCTaGAGGGCCCATGGAGGAGGG +
Preference number: 2 (lower is better)
Translates to: QGSCLGPAGIEPLIRVGDVGLPS*RAHGGG
Trigger: CCCTCCTCCATGGGCCCTGCAGGAGGGGAGACCCAC...ATCTCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR GCA 90 bp GGGTGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCTGGGCGCAGGGCTCCTaGTTGGGGCCGGCGGGGATA +
Preference number: 2 (lower is better)
Translates to: GCGRGSPVTSGVWLLPGTWAQGS*LGPAGI
Trigger: TATCCCCGCCGGCCCCAAGCAGGAGCCCTGCGCCCA...GGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CCA 90 bp GCCCAGGGAGGGACCACGGAGGGCAGGTGTAACCCCTGGCCTGGAGCACAGCTCCCTCCCCAAGCACCCTaGTCAGCTGGGGACCGCCTT +
Preference number: 2 (lower is better)
Translates to: AQGGTTEGRCNPWPGAQLPPQAP*SAGDRL
Trigger: AAGGCGGTCCCCAGCTGACCAGGGTGCTTGGGGAGG...GAGCTGTGCTCCAGGCCAGGGGTTACACCTGCCCTCCGTGGTCCCTCCCTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR TCA 90 bp GCAGGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAGACAGCTCTCAGAGCCCTaGGGCTCCCGGGGACAGAAA +
Preference number: 2 (lower is better)
Translates to: AGLLLGAGGDRAVDPGGRQLSEP*GSRGQK
Trigger: TTTCTGTCCCCGGGAGCCTCAGGGCTCTGAGAGCTG...TCTCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR TCA 90 bp GGCCCTGGGGACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCGGGGCTGGCGGGCTCTaGGCCGTTGTGCTGGGCGCA +
Preference number: 2 (lower is better)
Translates to: GPGDRGSSLLFKLETREGGAGGL*AVVLGA
Trigger: TGCGCCCAGCACAACGGCTCAGAGCCCGCCAGCCCC...GCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTCCCCAGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR GCA 90 bp GCGGGGATCTCCAGCCCCAGGTGCTTCATGAGCCGGGTCATGACCTCGTCAACGTCAGCATGGCGGTCCTaGCGAGGGGCGGGACGGGTC +
Preference number: 2 (lower is better)
Translates to: AGISSPRCFMSRVMTSSTSAWRS*RGAGRV
Trigger: GACCCGTCCCGCCCCTCGGCAGGACCGCCATGCTGA...CGTTGACGAGGTCATGACCCGGCTCATGAAGCACCTGGGGCTGGAGATCCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000601571.1
3UTR-3UTR CCA 90 bp TCCCCGGCGCTTGGTAGCCAGCGGCAGGTTCCCGCTGGGCCGGATCTGCAGCGAGTCACCTCTGGGGTGTaGCTTCTTCCCGGAACCGCA +
Preference number: 2 (lower is better)
Translates to: SPALGSQRQVPAGPDLQRVTSGV*LLPGTA
Trigger: TGCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGAC...TCGCTGCAGATCCGGCCCAGCGGGAACCTGCCGCTGGCTACCAAGCGCCGGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR CCA 90 bp GGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAGATTCTCCCCCACTTCAAGGTaGGTCTCCCCTCCTGCAGGG +
Preference number: 2 (lower is better)
Translates to: GLLLGAGGDRAVDPGGRFSPTSR*VSPPAG
Trigger: CCCTGCAGGAGGGGAGACCCACCTTGAAGTGGGGGA...GAATCTCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CCA 90 bp GCGGGGATCTCCAGCCCCAGGTGCTTCATGAGCCGGGTCATGACCTCGTCAACGATGCGGAGGTCAGCATaGCGGTCCTGCCGAGGGGCG +
Preference number: 2 (lower is better)
Translates to: AGISSPRCFMSRVMTSSTMRRSA*RSCRGA
Trigger: CGCCCCTCGGCAGGACCGCCATGCTGACCTCCGCAT...CGTTGACGAGGTCATGACCCGGCTCATGAAGCACCTGGGGCTGGAGATCCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000601571.1
3UTR-3UTR TCA 90 bp GGGTGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCCAGCTCTCAGAGCCCTaGGGCTCCCGGGGACAGAAA +
Preference number: 2 (lower is better)
Translates to: GCGRGSPVTSGVWLLPGTQLSEP*GSRGQK
Trigger: TTTCTGTCCCCGGGAGCCTCAGGGCTCTGAGAGCTG...GGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR GCA 90 bp ACCCACGTCTCCCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACGTGGGTCTCCCCTCCTaGAGGGCCCATGGAGGAGGG +
Preference number: 2 (lower is better)
Translates to: THVSLQPQRQCKPLLIPHVGLPS*RAHGGG
Trigger: CCCTCCTCCATGGGCCCTGCAGGAGGGGAGACCCAC...GTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGGGAGACGTGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR GCA 90 bp GGCCCTGGGGACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCGGCTCTGAGCCGTTGTaGTGGGCGCAGGGCTCCTGC +
Preference number: 2 (lower is better)
Translates to: GPGDRGSSLLFKLETREGGSEPL*WAQGSC
Trigger: GCAGGAGCCCTGCGCCCAGCACAACGGCTCAGAGCC...GCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTCCCCAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR GCA 90 bp GAGCCGGGTCATGACCTCGTCAACGTAGCCATGGATGCGGAGGTCAGCATGGCGCCCACGCGCTCCAGCTaGACCAGCGCCATGTGGGTC +
Preference number: 2 (lower is better)
Translates to: EPGHDLVNVAMDAEVSMAPTRSS*TSAMWV
Trigger: GACCCACATGGCGCTGGTGCAGCTGGAGCGCGTGGG...CGCCATGCTGACCTCCGCATCCATGGCTACGTTGACGAGGTCATGACCCGGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR CCA 90 bp GGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAGATTCGGCAGGTGTAACCCCTaGCCTGGAGCACAGCTCTCA +
Preference number: 2 (lower is better)
Translates to: GLLLGAGGDRAVDPGGRFGRCNP*PGAQLS
Trigger: TGAGAGCTGTGCTCCAGGCCAGGGGTTACACCTGCC...GAATCTCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CCA 90 bp TGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGCAGGAGGAGGGGTAGGGTaGGCTGTAGGGGGCCCAGAA +
Preference number: 2 (lower is better)
Translates to: CGRGSPVTSGVWLLPGTAGGGVG*AVGGPE
Trigger: TTCTGGGCCCCCTACAGCCCACCCTACCCCTCCTCC...TGCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CCA 90 bp GACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGCCTCACCTTGGGCTCCAGCTTaGGGGTGGGCGGGCGGGGCA +
Preference number: 2 (lower is better)
Translates to: DRGSSLLFKLETREGPASPWAPA*GWAGGA
Trigger: TGCCCCGCCCGCCCACCCCCAAGCTGGAGCCCAAGG...TGAGGCTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CCA 90 bp CCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTGGGCCGCTCCCGTTTaGGGCTGGCGGGCTCTGAGC +
Preference number: 2 (lower is better)
Translates to: PPAPKAVQASTDPPLQGGWAAPV*GWRALS
Trigger: GCTCAGAGCCCGCCAGCCCCAAACGGGAGCGGCCCA...CCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CCA 90 bp CCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTCTCCCCTGGGCCGCTCCCGTTTaGGGCTGGCGGGCTCTGAGC +
Preference number: 2 (lower is better)
Translates to: PQRQCKPLLIPHFKVGLPWAAPV*GWRALS
Trigger: GCTCAGAGCCCGCCAGCCCCAAACGGGAGCGGCCCA...GGGGAGACCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CCA 90 bp CCTGGGGACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCATGCACCAGCGCCATGTaGGTCTGCGTGGGCCGCGCG +
Preference number: 2 (lower is better)
Translates to: PGDRGSSLLFKLETREGPCTSAM*VCVGRA
Trigger: CGCGCGGCCCACGCAGACCCACATGGCGCTGGTGCA...TGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTCCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR CCA 90 bp GCGCTTGGTAGCCAGCGGCAGGTTCCCGCTGGGCCGGATCTGCAGCGATGTACCTGGCCTTCAGGCCCATaGTGCCCACGACTGTGTCTC +
Preference number: 2 (lower is better)
Translates to: ALGSQRQVPAGPDLQRCTWPSGP*CPRLCL
Trigger: GAGACACAGTCGTGGGCACCATGGGCCTGAAGGCCA...GGTACATCGCTGCAGATCCGGCCCAGCGGGAACCTGCCGCTGGCTACCAAGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR TCA 90 bp GCGGGGATCTCCAGCCCCAGGTGCTTCATGAGCCGGGTCATGACCTCGTCAACGGCGATGTACCCAGCGTaGTGGACAGGTCGGCGTTCC +
Preference number: 2 (lower is better)
Translates to: AGISSPRCFMSRVMTSSTAMYPA*WTGRRS
Trigger: GGAACGCCGACCTGTCCATCACGCTGGGTACATCGC...CGTTGACGAGGTCATGACCCGGCTCATGAAGCACCTGGGGCTGGAGATCCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR GCA 90 bp CCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTCTCCCCGTGGGTCTCCCCTCCTaGAGGGCCCATGGAGGAGGG +
Preference number: 2 (lower is better)
Translates to: PQRQCKPLLIPHFKVGLPVGLPS*RAHGGG
Trigger: CCCTCCTCCATGGGCCCTGCAGGAGGGGAGACCCAC...GGGGAGACCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR GCA 90 bp CCTGGGGACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGGCTCTGAGCCGTTGTaGTGGGCGCAGGGCTCCTGC +
Preference number: 2 (lower is better)
Translates to: PGDRGSSLLFKLETREGPGSEPL*WAQGSC
Trigger: GCAGGAGCCCTGCGCCCAGCACAACGGCTCAGAGCC...TGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTCCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR GCA 90 bp GCCAGCGGCAGGTTCCCGCTGGGCCGGATCTGCAGCGATGTACCCAGCGTGATGGTTCCCGTGGAGCTCTaGCAGTTTGTCCCTGGGGAA +
Preference number: 2 (lower is better)
Translates to: ASGRFPLGRICSDVPSVMVPVEL*QFVPGE
Trigger: TTCCCCAGGGACAAACTGGCAGAGCTCCACGGGAAC...CATCACGCTGGGTACATCGCTGCAGATCCGGCCCAGCGGGAACCTGCCGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR GCA 90 bp ACCCACGTCTCCCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACCCGCTGGGCCGGATCTaGAGCGATGTACCCAGCGTG +
Preference number: 2 (lower is better)
Translates to: THVSLQPQRQCKPLLIPHPLGRI*SDVPSV
Trigger: CACGCTGGGTACATCGCTGCAGATCCGGCCCAGCGG...GTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGGGAGACGTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR CCA 90 bp GGGTGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGTCACCTCTGGGGTGTaGCTTCTTCCCGGAACCGCA +
Preference number: 2 (lower is better)
Translates to: GCGRGSPVTSGVWLLPGTVTSGV*LLPGTA
Trigger: TGCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGAC...GGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CCA 90 bp ACCCACGTCTCCCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACGGAGGAGGGGTAGGGTaGGCTGTAGGGGGCCCAGAA +
Preference number: 2 (lower is better)
Translates to: THVSLQPQRQCKPLLIPHGGGVG*AVGGPE
Trigger: TTCTGGGCCCCCTACAGCCCACCCTACCCCTCCTCC...GTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGGGAGACGTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CCA 90 bp GACCCACGTCTCCCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCAGGAGGAGGGGTAGGGTaGGCTGTAGGGGGCCCAGAA +
Preference number: 2 (lower is better)
Translates to: DPRLPPAPKAVQASTDPPGGGVG*AVGGPE
Trigger: TTCTGGGCCCCCTACAGCCCACCCTACCCCTCCTCC...TGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGGGAGACGTGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CCA 90 bp TGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGCATCCCCCACTTCAAGGTaGGTCTCCCCTCCTGCAGGG +
Preference number: 2 (lower is better)
Translates to: CGRGSPVTSGVWLLPGTASPTSR*VSPPAG
Trigger: CCCTGCAGGAGGGGAGACCCACCTTGAAGTGGGGGA...TGCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CCA 90 bp TGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGCAAGCTGGGGACCGCCTTaGCCTTCACCCTTTTGGGGG +
Preference number: 2 (lower is better)
Translates to: CGRGSPVTSGVWLLPGTASWGPP*PSPFWG
Trigger: CCCCCAAAAGGGTGAAGGCCAAGGCGGTCCCCAGCT...TGCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CCA 90 bp GCCGTCCCAGGCGGGGATCTCCAGCCCCAGGTGCTTCATGAGCCGGGTCATGACCTGCCAGTTTGTCCCTaGGGAAGCCTGAGCGCACAT +
Preference number: 2 (lower is better)
Translates to: AVPGGDLQPQVLHEPGHDLPVCP*GSLSAH
Trigger: ATGTGCGCTCAGGCTTCCCCAGGGACAAACTGGCAG...GTCATGACCCGGCTCATGAAGCACCTGGGGCTGGAGATCCCCGCCTGGGACGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR CCA 90 bp GAGCCGGGTCATGACCTCGTCAACGTAGCCATGGATGCGGAGGTCAGCATGGCGGGGACAGAGGGTGCATaGTGGCCCTGGGCAGGGGTA +
Preference number: 2 (lower is better)
Translates to: EPGHDLVNVAMDAEVSMAGTEGA*WPWAGV
Trigger: TACCCCTGCCCAGGGCCACCATGCACCCTCTGTCCC...CGCCATGCTGACCTCCGCATCCATGGCTACGTTGACGAGGTCATGACCCGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601571.1
3UTR-3UTR TCA 90 bp ACCCACGTCTCCCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACCAGCTCTCAGAGCCCTaGGGCTCCCGGGGACAGAAA +
Preference number: 2 (lower is better)
Translates to: THVSLQPQRQCKPLLIPHQLSEP*GSRGQK
Trigger: TTTCTGTCCCCGGGAGCCTCAGGGCTCTGAGAGCTG...GTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGGGAGACGTGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR GCA 90 bp GGGTGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCTCGTGCTTGGTGGGCTaGAGGTTGACGATGACCAGG +
Preference number: 2 (lower is better)
Translates to: GCGRGSPVTSGVWLLPGTSCLVG*RLTMTR
Trigger: CCTGGTCATCGTCAACCTGCAGCCCACCAAGCACGA...GGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR CCA 90 bp GCGGGGATCTCCAGCCCCAGGTGCTTCATGAGCCGGGTCATGACCTCGTCAACGGGCAGGTGTAACCCCTaGCCTGGAGCACAGCTCTCA +
Preference number: 2 (lower is better)
Translates to: AGISSPRCFMSRVMTSSTGRCNP*PGAQLS
Trigger: TGAGAGCTGTGCTCCAGGCCAGGGGTTACACCTGCC...CGTTGACGAGGTCATGACCCGGCTCATGAAGCACCTGGGGCTGGAGATCCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR CCA 90 bp CCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGGGAGGAGGGGTAGGGTaGGCTGTAGGGGGCCCAGAA +
Preference number: 2 (lower is better)
Translates to: PPAPKAVQASTDPPLQGGGGGVG*AVGGPE
Trigger: TTCTGGGCCCCCTACAGCCCACCCTACCCCTCCTCC...CCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CCA 90 bp ACCCACGTCTCCCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTCTGAGCCGTTGTGCTaGGCGCAGGGCTCCTGCTTG +
Preference number: 2 (lower is better)
Translates to: THVSLQPQRQCKPLLIPHSEPLC*AQGSCL
Trigger: CAAGCAGGAGCCCTGCGCCCAGCACAACGGCTCAGA...GTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGGGAGACGTGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CCA 90 bp ACCCACGTCTCCCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACAGCTGGGGACCGCCTTaGCCTTCACCCTTTTGGGGG +
Preference number: 2 (lower is better)
Translates to: THVSLQPQRQCKPLLIPHSWGPP*PSPFWG
Trigger: CCCCCAAAAGGGTGAAGGCCAAGGCGGTCCCCAGCT...GTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGGGAGACGTGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CCA 90 bp CCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTCTCCCCCCTCCCCAAGCACCCTaGTCAGCTGGGGACCGCCTT +
Preference number: 2 (lower is better)
Translates to: PQRQCKPLLIPHFKVGLPPPQAP*SAGDRL
Trigger: AAGGCGGTCCCCAGCTGACCAGGGTGCTTGGGGAGG...GGGGAGACCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CCA 90 bp CATGACCTCGTCAACGTAGCCATGGATGCGGAGGTCAGCATGGCGGTCGTGCTTGCGGCAGGTTCCCGCTaGGCCGGATCTGCAGCGATG +
Preference number: 2 (lower is better)
Translates to: HDLVNVAMDAEVSMAVVLAAGSR*AGSAAM
Trigger: CATCGCTGCAGATCCGGCCCAGCGGGAACCTGCCGC...AAGCACGACCGCCATGCTGACCTCCGCATCCATGGCTACGTTGACGAGGTCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR TCA 90 bp ACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGCCTCACCGTCCACGTTCTGGCTaGCCAGGAAGCGGAGGAGGC +
Preference number: 2 (lower is better)
Translates to: TEGVHSCLSWRPGRAQPHRPRSG*PGSGGG
Trigger: GCCTCCTCCGCTTCCTGGTCAGCCAGAACGTGGACG...GTGAGGCTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR GCA 90 bp TGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGCACAGCCCCAAAGGCAGTaGAAGCCTCTACTGATCCCC +
Preference number: 2 (lower is better)
Translates to: CGRGSPVTSGVWLLPGTAQPQRQ*KPLLIP
Trigger: GGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTG...TGCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR GCA 90 bp GACCCACGTCTCCCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACCTTCAGGCCCATGGTaGCCACGACTGTGTCTCGGA +
Preference number: 2 (lower is better)
Translates to: DPRLPPAPKAVQASTDPPPSGPW*PRLCLG
Trigger: TCCGAGACACAGTCGTGGGCACCATGGGCCTGAAGG...TGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGGGAGACGTGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR CCA 90 bp ACCCACGTCTCCCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACGGCAGGTGTAACCCCTaGCCTGGAGCACAGCTCTCA +
Preference number: 2 (lower is better)
Translates to: THVSLQPQRQCKPLLIPHGRCNP*PGAQLS
Trigger: TGAGAGCTGTGCTCCAGGCCAGGGGTTACACCTGCC...GTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGGGAGACGTGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CCA 90 bp GGCCCTGGGGACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCGTCACCTCTGGGGTGTaGCTTCTTCCCGGAACCGCA +
Preference number: 2 (lower is better)
Translates to: GPGDRGSSLLFKLETREGVTSGV*LLPGTA
Trigger: TGCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGAC...GCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTCCCCAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CCA 90 bp GCGGGGATCTCCAGCCCCAGGTGCTTCATGAGCCGGGTCATGACCTCGTCAACGCACTCCTGTTTAAGCTaGAGACCAGGGAGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: AGISSPRCFMSRVMTSSTHSCLS*RPGRAQ
Trigger: CTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTG...CGTTGACGAGGTCATGACCCGGCTCATGAAGCACCTGGGGCTGGAGATCCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR CCA 90 bp TCACCTCTGGACAACACAGCAAGTCAGAGGCTGGGGTGTGGCAGGGGCTCACCTAGCTGGGGACCGCCTTaGCCTTCACCCTTTTGGGGG +
Preference number: 2 (lower is better)
Translates to: SPLDNTASQRLGCGRGSPSWGPP*PSPFWG
Trigger: CCCCCAAAAGGGTGAAGGCCAAGGCGGTCCCCAGCT...AGGTGAGCCCCTGCCACACCCCAGCCTCTGACTTGCTGTGTTGTCCAGAGGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR TCA 90 bp ACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGCCTCACCAGCTCTCAGAGCCCTaGGGCTCCCGGGGACAGAAA +
Preference number: 2 (lower is better)
Translates to: TEGVHSCLSWRPGRAQPHQLSEP*GSRGQK
Trigger: TTTCTGTCCCCGGGAGCCTCAGGGCTCTGAGAGCTG...GTGAGGCTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR GCA 90 bp ACCCACGTCTCCCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACGTTCCCGTGGAGCTCTaGCAGTTTGTCCCTGGGGAA +
Preference number: 2 (lower is better)
Translates to: THVSLQPQRQCKPLLIPHVPVEL*QFVPGE
Trigger: TTCCCCAGGGACAAACTGGCAGAGCTCCACGGGAAC...GTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGGGAGACGTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR CCA 90 bp CCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTCTCCCCGTCACCTCTGGGGTGTaGCTTCTTCCCGGAACCGCA +
Preference number: 2 (lower is better)
Translates to: PQRQCKPLLIPHFKVGLPVTSGV*LLPGTA
Trigger: TGCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGAC...GGGGAGACCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CCA 90 bp CATGACCTCGTCAACGTAGCCATGGATGCGGAGGTCAGCATGGCGGTCGTGCTTAGCCCGTCCACGTTCTaGCTGACCAGGAAGCGGAGG +
Preference number: 2 (lower is better)
Translates to: HDLVNVAMDAEVSMAVVLSPSTF*LTRKRR
Trigger: CCTCCGCTTCCTGGTCAGCCAGAACGTGGACGGGCT...AAGCACGACCGCCATGCTGACCTCCGCATCCATGGCTACGTTGACGAGGTCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR CCA 90 bp GGCCCATGGTGCCCACGACTGTGTCTCGGACGTACTGCGTCTTACACTTGGCACAAGCCTGAGCGCACATaGAGCCCGTCCACGTTCTGG +
Preference number: 2 (lower is better)
Translates to: GPWCPRLCLGRTASYTWHKPERT*SPSTFW
Trigger: CCAGAACGTGGACGGGCTCCATGTGCGCTCAGGCTT...GTGCCAAGTGTAAGACGCAGTACGTCCGAGACACAGTCGTGGGCACCATGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR CCA 90 bp GACCCACGTCTCCCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTGCCAGTTTGTCCCTaGGGAAGCCTGAGCGCACAT +
Preference number: 2 (lower is better)
Translates to: DPRLPPAPKAVQASTDPPLPVCP*GSLSAH
Trigger: ATGTGCGCTCAGGCTTCCCCAGGGACAAACTGGCAG...TGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGGGAGACGTGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR CCA 90 bp CAGCCCCAGGTGCTTCATGAGCCGGGTCATGACCTCGTCAACGTAGCCATGGATGGCAGGTGTAACCCCTaGCCTGGAGCACAGCTCTCA +
Preference number: 2 (lower is better)
Translates to: QPQVLHEPGHDLVNVAMDGRCNP*PGAQLS
Trigger: TGAGAGCTGTGCTCCAGGCCAGGGGTTACACCTGCC...ATCCATGGCTACGTTGACGAGGTCATGACCCGGCTCATGAAGCACCTGGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR CCA 90 bp ACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGCCTCACGTCACCTCTGGGGTGTaGCTTCTTCCCGGAACCGCA +
Preference number: 2 (lower is better)
Translates to: TEGVHSCLSWRPGRAQPHVTSGV*LLPGTA
Trigger: TGCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGAC...GTGAGGCTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CCA 90 bp CCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGCACTCCTGTTTAAGCTaGAGACCAGGGAGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: PPAPKAVQASTDPPLQGGHSCLS*RPGRAQ
Trigger: CTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTG...CCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CCA 90 bp AGCACAGCTCTCAGAGCCCTGAGGCTCCCGGGGACAGAAACAAGTAACAAAGTGGCTCCCGTTTGGGGCTaGCGGGCTCTGAGCCGTTGT +
Preference number: 2 (lower is better)
Translates to: STALRALRLPGTETSNKVAPVWG*RALSRC
Trigger: ACAACGGCTCAGAGCCCGCCAGCCCCAAACGGGAGC...CACTTTGTTACTTGTTTCTGTCCCCGGGAGCCTCAGGGCTCTGAGAGCTGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CCA 90 bp AGCACAGCTCTCAGAGCCCTGAGGCTCCCGGGGACAGAAACAAGTAACAAAGTGCCTCCCCAAGCACCCTaGTCAGCTGGGGACCGCCTT +
Preference number: 2 (lower is better)
Translates to: STALRALRLPGTETSNKVPPQAP*SAGDRL
Trigger: AAGGCGGTCCCCAGCTGACCAGGGTGCTTGGGGAGG...CACTTTGTTACTTGTTTCTGTCCCCGGGAGCCTCAGGGCTCTGAGAGCTGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CCA 90 bp CTTCAGGCCCATGGTGCCCACGACTGTGTCTCGGACGTACTGCGTCTTACACTTAGCCCGTCCACGTTCTaGCTGACCAGGAAGCGGAGG +
Preference number: 2 (lower is better)
Translates to: LQAHGAHDCVSDVLRLTLSPSTF*LTRKRR
Trigger: CCTCCGCTTCCTGGTCAGCCAGAACGTGGACGGGCT...AAGTGTAAGACGCAGTACGTCCGAGACACAGTCGTGGGCACCATGGGCCTGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR TCA 90 bp AGCACAGCTCTCAGAGCCCTGAGGCTCCCGGGGACAGAAACAAGTAACAAAGTGCAGCTCTCAGAGCCCTaGGGCTCCCGGGGACAGAAA +
Preference number: 2 (lower is better)
Translates to: STALRALRLPGTETSNKVQLSEP*GSRGQK
Trigger: TTTCTGTCCCCGGGAGCCTCAGGGCTCTGAGAGCTG...CACTTTGTTACTTGTTTCTGTCCCCGGGAGCCTCAGGGCTCTGAGAGCTGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR TCA 90 bp TCACCTCTGGACAACACAGCAAGTCAGAGGCTGGGGTGTGGCAGGGGCTCACCTAGTGCAAGCCTCTACTaGTCCCCCACTTCAAGGTGG +
Preference number: 2 (lower is better)
Translates to: SPLDNTASQRLGCGRGSPSASLY*SPTSRW
Trigger: CCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACT...AGGTGAGCCCCTGCCACACCCCAGCCTCTGACTTGCTGTGTTGTCCAGAGGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CCA 90 bp CCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTCTCCCCACTTTTCCAGAAGCCTaGTGGACCCACGTCTCCCTC +
Preference number: 2 (lower is better)
Translates to: PQRQCKPLLIPHFKVGLPTFPEA*WTHVSL
Trigger: GAGGGAGACGTGGGTCCACCAGGCTTCTGGAAAAGT...GGGGAGACCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CCA 90 bp TGCAGGTTGACGATGACCAGGCGGCCTCCCCGGCGCTTGGTAGCCAGCGGCAGGACTGCGTCTTACACTTaGCACATTCTTCCACAAACA +
Preference number: 2 (lower is better)
Translates to: CRLTMTRRPPRRLVASGRTASYT*HILPQT
Trigger: TGTTTGTGGAAGAATGTGCCAAGTGTAAGACGCAGT...CCTGCCGCTGGCTACCAAGCGCCGGGGAGGCCGCCTGGTCATCGTCAACCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR TCA 90 bp GTACTGCGTCTTACACTTGGCACATTCTTCCACAAACATGTTCCCGTGGAGCTCGTCCCTGGGGAAGCCTaGGCGCACATGGAGCCCGTC +
Preference number: 2 (lower is better)
Translates to: VLRLTLGTFFHKHVPVELVPGEA*AHMEPV
Trigger: GACGGGCTCCATGTGCGCTCAGGCTTCCCCAGGGAC...GAGCTCCACGGGAACATGTTTGTGGAAGAATGTGCCAAGTGTAAGACGCAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR TCA 90 bp GGACGTACTGCGTCTTACACTTGGCACATTCTTCCACAAACATGTTCCCGTGGAGTCCCTGGGGAAGCCTaGGCGCACATGGAGCCCGTC +
Preference number: 2 (lower is better)
Translates to: GRTASYTWHILPQTCSRGVPGEA*AHMEPV
Trigger: GACGGGCTCCATGTGCGCTCAGGCTTCCCCAGGGAC...TCCACGGGAACATGTTTGTGGAAGAATGTGCCAAGTGTAAGACGCAGTACGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR CCA 90 bp AGCACAGCTCTCAGAGCCCTGAGGCTCCCGGGGACAGAAACAAGTAACAAAGTGCACTCCTGTTTAAGCTaGAGACCAGGGAGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: STALRALRLPGTETSNKVHSCLS*RPGRAQ
Trigger: CTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTG...CACTTTGTTACTTGTTTCTGTCCCCGGGAGCCTCAGGGCTCTGAGAGCTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR GCA 90 bp GAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTCTGGGCGCAGGGCTCCTaGTTGGGGCCGGCGGGGATA +
Preference number: 2 (lower is better)
Translates to: EIVFIALRTFPEAWWTHVWAQGS*LGPAGI
Trigger: TATCCCCGCCGGCCCCAAGCAGGAGCCCTGCGCCCA...GACGTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CCA 90 bp AATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTCTCTGCACCAGCGCCATGTaGGTCTGCGTGGGCCGCGCG +
Preference number: 2 (lower is better)
Translates to: NCFYCIEDFSRSLVDPRLCTSAM*VCVGRA
Trigger: CGCGCGGCCCACGCAGACCCACATGGCGCTGGTGCA...GAGACGTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR GCA 90 bp GAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTCGGCTCTGAGCCGTTGTaGTGGGCGCAGGGCTCCTGC +
Preference number: 2 (lower is better)
Translates to: EIVFIALRTFPEAWWTHVGSEPL*WAQGSC
Trigger: GCAGGAGCCCTGCGCCCAGCACAACGGCTCAGAGCC...GACGTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CCA 90 bp GAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTCGCTCCCGTTTGGGGCTaGCGGGCTCTGAGCCGTTGT +
Preference number: 2 (lower is better)
Translates to: EIVFIALRTFPEAWWTHVAPVWG*RALSRC
Trigger: ACAACGGCTCAGAGCCCGCCAGCCCCAAACGGGAGC...GACGTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR GCA 90 bp AAAGAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTGGGTCTCCCCTCCTaGAGGGCCCATGGAGGAGGG +
Preference number: 2 (lower is better)
Translates to: KEIVFIALRTFPEAWWTHVGLPS*RAHGGG
Trigger: CCCTCCTCCATGGGCCCTGCAGGAGGGGAGACCCAC...GTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CCA 90 bp AATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTCTCTCCCCCACTTCAAGGTaGGTCTCCCCTCCTGCAGGG +
Preference number: 2 (lower is better)
Translates to: NCFYCIEDFSRSLVDPRLSPTSR*VSPPAG
Trigger: CCCTGCAGGAGGGGAGACCCACCTTGAAGTGGGGGA...GAGACGTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CCA 90 bp AATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTCTCTCTGAGCCGTTGTGCTaGGCGCAGGGCTCCTGCTTG +
Preference number: 2 (lower is better)
Translates to: NCFYCIEDFSRSLVDPRLSEPLC*AQGSCL
Trigger: CAAGCAGGAGCCCTGCGCCCAGCACAACGGCTCAGA...GAGACGTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CCA 90 bp AATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTCTCGGCAGGTGTAACCCCTaGCCTGGAGCACAGCTCTCA +
Preference number: 2 (lower is better)
Translates to: NCFYCIEDFSRSLVDPRLGRCNP*PGAQLS
Trigger: TGAGAGCTGTGCTCCAGGCCAGGGGTTACACCTGCC...GAGACGTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR GCA 90 bp AATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTCTCCAGCCCCAAAGGCAGTaGAAGCCTCTACTGATCCCC +
Preference number: 2 (lower is better)
Translates to: NCFYCIEDFSRSLVDPRLQPQRQ*KPLLIP
Trigger: GGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTG...GAGACGTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CCA 90 bp AAAGAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACCACTCCTGTTTAAGCTaGAGACCAGGGAGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: KEIVFIALRTFPEAWWTHHSCLS*RPGRAQ
Trigger: CTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTG...GTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR TCA 90 bp AAAGAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACAGTGCAAGCCTCTACTaGTCCCCCACTTCAAGGTGG +
Preference number: 2 (lower is better)
Translates to: KEIVFIALRTFPEAWWTHSASLY*SPTSRW
Trigger: CCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACT...GTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CCA 90 bp AAAGAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACACAAACATGTTCCCGTaGAGCTCTGCCAGTTTGTCC +
Preference number: 2 (lower is better)
Translates to: KEIVFIALRTFPEAWWTHTNMFP*SSASLS
Trigger: GGACAAACTGGCAGAGCTCCACGGGAACATGTTTGT...GTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR TCA 90 bp AAAGAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACTTGTTTTTATTGCATTaGGGACTTTTCCAGAAGCCT +
Preference number: 2 (lower is better)
Translates to: KEIVFIALRTFPEAWWTHLFLLH*GLFQKP
Trigger: AGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAA...GTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR GCA 72 bp CGCTCCCGTTTGGGGCTGGCGGGCTCTGAGCCGTTGTaGTGGGCGCAGGGCTCCTGCTTGGGGCCGGCGGGG +
Preference number: 3 (lower is better)
Translates to: RSRLGLAGSEPL*WAQGSCLGPAG
Trigger: CCCCGCCGGCCCCAAGCAGGAGCCCTGCGCCCAGCACAACGGCTCAGAGCCCGCCAGCCCCAAACGGGAGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR GCA 72 bp CTGACCAGGAAGCGGAGGAGGCCCACGCGCTCCAGCTaGACCAGCGCCATGTGGGTCTGCGTGGGCCGCGCG +
Preference number: 3 (lower is better)
Translates to: LTRKRRRPTRSS*TSAMWVCVGRA
Trigger: CGCGCGGCCCACGCAGACCCACATGGCGCTGGTGCAGCTGGAGCGCGTGGGCCTCCTCCGCTTCCTGGTCAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR CAA 90 bp GGTGCAGAGCCGGCCCGTGGCCTTCAGGCCCATGGTGCCCACGACTGTGTCTCGTCCTTGGGCTCCAGCTaGGGGGTGGGCGGGCGGGGC +
Preference number: 3 (lower is better)
Translates to: GAEPARGLQAHGAHDCVSSLGSS*GVGGRG
Trigger: GCCCCGCCCGCCCACCCCCAAGCTGGAGCCCAAGGA...CGAGACACAGTCGTGGGCACCATGGGCCTGAAGGCCACGGGCCGGCTCTGCACC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR CAA 90 bp CAGGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAGATTCCTTGGGCTCCAGCTaGGGGGTGGGCGGGCGGGGC +
Preference number: 3 (lower is better)
Translates to: QGSCLGPAGIEPLIRVGDSLGSS*GVGGRG
Trigger: GCCCCGCCCGCCCACCCCCAAGCTGGAGCCCAAGGA...ATCTCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR GCA 72 bp GCGGGCTCTGAGCCGTTGTGCTGGGCGCAGGGCTCCTaGTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGG +
Preference number: 3 (lower is better)
Translates to: AGSEPLCWAQGS*LGPAGIEPLIR
Trigger: CCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGCGCCCAGCACAACGGCTCAGAGCCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CAA 90 bp GCGCTTGGTAGCCAGCGGCAGGTTCCCGCTGGGCCGGATCTGCAGCGATGTACCGTGGGCCGCTCCCGTTaGGGGCTGGCGGGCTCTGAG +
Preference number: 3 (lower is better)
Translates to: ALGSQRQVPAGPDLQRCTVGRSR*GLAGSE
Trigger: CTCAGAGCCCGCCAGCCCCAAACGGGAGCGGCCCAC...GGTACATCGCTGCAGATCCGGCCCAGCGGGAACCTGCCGCTGGCTACCAAGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR GCA 72 bp GGACAGGTCGGCGTTCCTGCAGGCTCGCAGCCCCCTTaGCTTAGCCACGGTGCAGAGCCGGCCCGTGGCCTT +
Preference number: 3 (lower is better)
Translates to: GQVGVPAGSQPP*LSHGAEPARGL
Trigger: AAGGCCACGGGCCGGCTCTGCACCGTGGCTAAGGCAAGGGGGCTGCGAGCCTGCAGGAACGCCGACCTGTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599365.5
3UTR GCA 72 bp GGACAGGTCGGCGTTCCTGCTGGCCTCATCGGCGAGTaGCAGGTCCCGGTCGGGCAGGGAGTCCTCCCAGTC +
Preference number: 3 (lower is better)
Translates to: GQVGVPAGLIGE*QVPVGQGVLPV
Trigger: GACTGGGAGGACTCCCTGCCCGACCGGGACCTGGCACTCGCCGATGAGGCCAGCAGGAACGCCGACCTGTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600938.5
3UTR-3UTR CAA 90 bp TGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGCATCCTTGGGCTCCAGCTaGGGGGTGGGCGGGCGGGGC +
Preference number: 3 (lower is better)
Translates to: CGRGSPVTSGVWLLPGTASLGSS*GVGGRG
Trigger: GCCCCGCCCGCCCACCCCCAAGCTGGAGCCCAAGGA...TGCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CAA 90 bp CAGCGATGTACCCAGCGTGATGGACAGGTCGGCGTTCCTGCTGGCCTCATCGGCGCGCAGGGCTCCTGCTaGGGGCCGGCGGGGATAGAG +
Preference number: 3 (lower is better)
Translates to: QRCTQRDGQVGVPAGLIGAQGSC*GPAGIE
Trigger: CTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGCGC...GCCGATGAGGCCAGCAGGAACGCCGACCTGTCCATCACGCTGGGTACATCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600938.5
3UTR-3UTR CAA 90 bp GGTGGGCTGCAGGTTGACGATGACCAGGCGGCCTCCCCGGCGCTTGGTAGCCAGCAGCTGGGGACCGCCTaGGCCTTCACCCTTTTGGGG +
Preference number: 3 (lower is better)
Translates to: GGLQVDDDQAASPALGSQQLGTA*AFTLLG
Trigger: CCCCAAAAGGGTGAAGGCCAAGGCGGTCCCCAGCTG...CTGGCTACCAAGCGCCGGGGAGGCCGCCTGGTCATCGTCAACCTGCAGCCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR CCA 72 bp GGGAAGCCTGAGCGCACATGGAGCCCGTCCACGTTCTaGCTGACCAGGAAGCGGAGGAGGCCCACGCGCTCC +
Preference number: 3 (lower is better)
Translates to: GKPERTWSPSTF*LTRKRRRPTRS
Trigger: GGAGCGCGTGGGCCTCCTCCGCTTCCTGGTCAGCCAGAACGTGGACGGGCTCCATGTGCGCTCAGGCTTCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR CCA 72 bp GGTCCCGGTCGGGCAGGGAGTCCTCCCAGTCTAGGATaGTGTCCCTCAGCTCTCCCCTGCAGGCTCGCAGCC +
Preference number: 3 (lower is better)
Translates to: GPGRAGSPPSLG*CPSALPCRLAA
Trigger: GGCTGCGAGCCTGCAGGGGAGAGCTGAGGGACACCATCCTAGACTGGGAGGACTCCCTGCCCGACCGGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600938.5
3UTR-3UTR CAA 90 bp GCAGGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAGAGCGGGGATAGAGCCGTaGATCCGGGTGGGAGATTCC +
Preference number: 3 (lower is better)
Translates to: AGLLLGAGGDRAVDPGGRAGIEP*IRVGDS
Trigger: GGAATCTCCCACCCGGATCAACGGCTCTATCCCCGC...TCTCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CAA 90 bp GGCCCTGGGGACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCGCGCAGGGCTCCTGCTaGGGGCCGGCGGGGATAGAG +
Preference number: 3 (lower is better)
Translates to: GPGDRGSSLLFKLETREGAQGSC*GPAGIE
Trigger: CTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGCGC...GCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTCCCCAGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CAA 90 bp GGCCCTGGGGACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCGCGGGCTCTGAGCCGTaGTGCTGGGCGCAGGGCTCC +
Preference number: 3 (lower is better)
Translates to: GPGDRGSSLLFKLETREGAGSEP*CWAQGS
Trigger: GGAGCCCTGCGCCCAGCACAACGGCTCAGAGCCCGC...GCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTCCCCAGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR TCA 72 bp AGCCTGAGCGCACATGGAGCCCGTCCACGTTCTGGCTaGCCAGGAAGCGGAGGAGGCCCACGCGCTCCAGCT +
Preference number: 3 (lower is better)
Translates to: SLSAHGARPRSG*PGSGGGPRAPA
Trigger: AGCTGGAGCGCGTGGGCCTCCTCCGCTTCCTGGTCAGCCAGAACGTGGACGGGCTCCATGTGCGCTCAGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR TCA 72 bp TCCCGCTGGGCCGGATCTGCAGCGATGTACCCAGCGTaGTGGACAGGTCGGCGTTCCTGCAGGCTCGCAGCC +
Preference number: 3 (lower is better)
Translates to: SRWAGSAAMYPA*WTGRRSCRLAA
Trigger: GGCTGCGAGCCTGCAGGAACGCCGACCTGTCCATCACGCTGGGTACATCGCTGCAGATCCGGCCCAGCGGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599365.5
3UTR CCA 72 bp CCACGGTGCAGAGCCGGCCCGTGGCCTTCAGGCCCATaGTGCCCACGACTGTGTCTCGGACGTACTGCGTCT +
Preference number: 3 (lower is better)
Translates to: PRCRAGPWPSGP*CPRLCLGRTAS
Trigger: AGACGCAGTACGTCCGAGACACAGTCGTGGGCACCATGGGCCTGAAGGCCACGGGCCGGCTCTGCACCGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR CAA 90 bp CAGGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAGATGCGGGGATAGAGCCGTaGATCCGGGTGGGAGATTCC +
Preference number: 3 (lower is better)
Translates to: QGSCLGPAGIEPLIRVGDAGIEP*IRVGDS
Trigger: GGAATCTCCCACCCGGATCAACGGCTCTATCCCCGC...ATCTCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CAA 90 bp GTGCTTGGTGGGCTGCAGGTTGACGATGACCAGGCGGCCTCCCCGGCGCTTGGTGCGGGGATAGAGCCGTaGATCCGGGTGGGAGATTCC +
Preference number: 3 (lower is better)
Translates to: VLGGLQVDDDQAASPALGAGIEP*IRVGDS
Trigger: GGAATCTCCCACCCGGATCAACGGCTCTATCCCCGC...ACCAAGCGCCGGGGAGGCCGCCTGGTCATCGTCAACCTGCAGCCCACCAAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR CAA 90 bp CCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTCTCCCCGCGGGCTCTGAGCCGTaGTGCTGGGCGCAGGGCTCC +
Preference number: 3 (lower is better)
Translates to: PQRQCKPLLIPHFKVGLPAGSEP*CWAQGS
Trigger: GGAGCCCTGCGCCCAGCACAACGGCTCAGAGCCCGC...GGGGAGACCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CAA 90 bp CCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGGCGGGCTCTGAGCCGTaGTGCTGGGCGCAGGGCTCC +
Preference number: 3 (lower is better)
Translates to: PPAPKAVQASTDPPLQGGAGSEP*CWAQGS
Trigger: GGAGCCCTGCGCCCAGCACAACGGCTCAGAGCCCGC...CCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CAA 90 bp GGTGCAGAGCCGGCCCGTGGCCTTCAGGCCCATGGTGCCCACGACTGTGTCTCGTGGAGCTCTGCCAGTTaGTCCCTGGGGAAGCCTGAG +
Preference number: 3 (lower is better)
Translates to: GAEPARGLQAHGAHDCVSWSSAS*SLGKPE
Trigger: CTCAGGCTTCCCCAGGGACAAACTGGCAGAGCTCCA...CGAGACACAGTCGTGGGCACCATGGGCCTGAAGGCCACGGGCCGGCTCTGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR TCA 72 bp TCCCGCTGGGCCGGATCTGCAGCGATGTACCCAGCGTaGTGGACAGGTCGGCGTTCCTGCTGGCCTCATCGG +
Preference number: 3 (lower is better)
Translates to: SRWAGSAAMYPA*WTGRRSCWPHR
Trigger: CCGATGAGGCCAGCAGGAACGCCGACCTGTCCATCACGCTGGGTACATCGCTGCAGATCCGGCCCAGCGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600938.5
3UTR GCA 72 bp CGGTGCAGAGCCGGCCCGTGGCCTTCAGGCCCATGGTaGCCACGACTGTGTCTCGGACGTACTGCGTCTTAC +
Preference number: 3 (lower is better)
Translates to: RCRAGPWPSGPW*PRLCLGRTASY
Trigger: GTAAGACGCAGTACGTCCGAGACACAGTCGTGGGCACCATGGGCCTGAAGGCCACGGGCCGGCTCTGCACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR GCA 72 bp TTGGTAGCCAGCGGCAGGTTCCCGCTGGGCCGGATCTaGAGCGATGTACCCAGCGTGATGGACAGGTCGGCG +
Preference number: 3 (lower is better)
Translates to: LVASGRFPLGRI*SDVPSVMDRSA
Trigger: CGCCGACCTGTCCATCACGCTGGGTACATCGCTGCAGATCCGGCCCAGCGGGAACCTGCCGCTGGCTACCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR CAA 90 bp TTCCCGCTGGGCCGGATCTGCAGCGATGTACCCAGCGTGATGGACAGGTCGGCGGTGGGAGATTCCTCCTaGGGCTCCAGCTTGGGGGTG +
Preference number: 3 (lower is better)
Translates to: FPLGRICSDVPSVMDRSAVGDSS*GSSLGV
Trigger: CACCCCCAAGCTGGAGCCCAAGGAGGAATCTCCCAC...CGCCGACCTGTCCATCACGCTGGGTACATCGCTGCAGATCCGGCCCAGCGGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR CAA 90 bp CAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTCTCGCGCAGGGCTCCTGCTaGGGGCCGGCGGGGATAGAG +
Preference number: 3 (lower is better)
Translates to: QPQRQCKPLLIPHFKVGLAQGSC*GPAGIE
Trigger: CTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGCGC...GAGACCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR CCA 72 bp TCTGCCAGTTTGTCCCTGGGGAAGCCTGAGCGCACATaGAGCCCGTCCACGTTCTGGCTGACCAGGAAGCGG +
Preference number: 3 (lower is better)
Translates to: SASLSLGKPERT*SPSTFWLTRKR
Trigger: CCGCTTCCTGGTCAGCCAGAACGTGGACGGGCTCCATGTGCGCTCAGGCTTCCCCAGGGACAAACTGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR CAA 90 bp CCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGGCGGGGATAGAGCCGTaGATCCGGGTGGGAGATTCC +
Preference number: 3 (lower is better)
Translates to: PPAPKAVQASTDPPLQGGAGIEP*IRVGDS
Trigger: GGAATCTCCCACCCGGATCAACGGCTCTATCCCCGC...CCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CAA 90 bp CAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTCTCCAGCTGGGGACCGCCTaGGCCTTCACCCTTTTGGGG +
Preference number: 3 (lower is better)
Translates to: QPQRQCKPLLIPHFKVGLQLGTA*AFTLLG
Trigger: CCCCAAAAGGGTGAAGGCCAAGGCGGTCCCCAGCTG...GAGACCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CAA 90 bp CAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTCTCTGGAGCTCTGCCAGTTaGTCCCTGGGGAAGCCTGAG +
Preference number: 3 (lower is better)
Translates to: QPQRQCKPLLIPHFKVGLWSSAS*SLGKPE
Trigger: CTCAGGCTTCCCCAGGGACAAACTGGCAGAGCTCCA...GAGACCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR CAA 90 bp AATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTCTCGCGCAGGGCTCCTGCTaGGGGCCGGCGGGGATAGAG +
Preference number: 3 (lower is better)
Translates to: NCFYCIEDFSRSLVDPRLAQGSC*GPAGIE
Trigger: CTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGCGC...GAGACGTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CAA 90 bp AAAGAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACTCCTTGGGCTCCAGCTaGGGGGTGGGCGGGCGGGGC +
Preference number: 3 (lower is better)
Translates to: KEIVFIALRTFPEAWWTHSLGSS*GVGGRG
Trigger: GCCCCGCCCGCCCACCCCCAAGCTGGAGCCCAAGGA...GTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CAA 90 bp CCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTACTGCGTCTTACACTaGGCACATTCTTCCACAAAC +
Preference number: 3 (lower is better)
Translates to: PPAPKAVQASTDPPLQGGYCVLH*AHSSTN
Trigger: GTTTGTGGAAGAATGTGCCAAGTGTAAGACGCAGTA...CCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR CAA 90 bp AAAGAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACCGGCCTCCCCGGCGCTaGGTAGCCAGCGGCAGGTTC +
Preference number: 3 (lower is better)
Translates to: KEIVFIALRTFPEAWWTHRPPRR*VASGRF
Trigger: GAACCTGCCGCTGGCTACCAAGCGCCGGGGAGGCCG...GTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR CCA 72 bp TTACACTTGGCACATTCTTCCACAAACATGTTCCCGTaGAGCTCTGCCAGTTTGTCCCTGGGGAAGCCTGAG +
Preference number: 3 (lower is better)
Translates to: LHLAHSSTNMFP*SSASLSLGKPE
Trigger: CTCAGGCTTCCCCAGGGACAAACTGGCAGAGCTCCACGGGAACATGTTTGTGGAAGAATGTGCCAAGTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR-3UTR CAA 90 bp CCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTCTCCCCATTGTTTTTATTGCATaGAGGACTTTTCCAGAAGCC +
Preference number: 3 (lower is better)
Translates to: PQRQCKPLLIPHFKVGLPIVFIA*RTFPEA
Trigger: GGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAAT...GGGGAGACCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CAA 90 bp AAAGAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTGGGAGATTCCTCCTaGGGCTCCAGCTTGGGGGTG +
Preference number: 3 (lower is better)
Translates to: KEIVFIALRTFPEAWWTHVGDSS*GSSLGV
Trigger: CACCCCCAAGCTGGAGCCCAAGGAGGAATCTCCCAC...GTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR-3UTR CAA 90 bp AAAGAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACTTGGTGGGCTGCAGGTaGACGATGACCAGGCGGCCT +
Preference number: 3 (lower is better)
Translates to: KEIVFIALRTFPEAWWTHLVGCR*TMTRRP
Trigger: AGGCCGCCTGGTCATCGTCAACCTGCAGCCCACCAA...GTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
3UTR CAA 72 bp GGCCGCTCCCGTTTGGGGCTGGCGGGCTCTGAGCCGTaGTGCTGGGCGCAGGGCTCCTGCTTGGGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: GRSRLGLAGSEP*CWAQGSCLGPA
Trigger: CGCCGGCCCCAAGCAGGAGCCCTGCGCCCAGCACAACGGCTCAGAGCCCGCCAGCCCCAAACGGGAGCGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp GCGGCCTCCCCGGCGCTTGGTAGCCAGCGGCAGGTTCCCGCTGGGCCGGATCTGTGGGCGCAGGGCTCCTaGTTGGGGCCGGCGGGGATA +
Preference number: 4 (lower is better)
Translates to: AASPALGSQRQVPAGPDLWAQGS*LGPAGI
Trigger: TATCCCCGCCGGCCCCAAGCAGGAGCCCTGCGCCCA...CAGATCCGGCCCAGCGGGAACCTGCCGCTGGCTACCAAGCGCCGGGGAGGCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR GCA 90 bp CGAGGGGCGGGACGGGTCAGGCGTGGGGGACAGAGGGTGCATGGTGGCCCTGGGGGCCTCATCGGCGAGTaGCAGGTCCCGGTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: RGAGRVRRGGQRVHGGPGGLIGE*QVPVGQ
Trigger: CTGCCCGACCGGGACCTGGCACTCGCCGATGAGGCC...CCCAGGGCCACCATGCACCCTCTGTCCCCCACGCCTGACCCGTCCCGCCCCTCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000601571.1
CDS-3UTR GCA 90 bp GTGGCAGCGCCCTCTCCAGCACACGGGGGCCGTCCCAGGCGGGGATCTCCAGCCCCCACGCGCTCCAGCTaGACCAGCGCCATGTGGGTC +
Preference number: 4 (lower is better)
Translates to: VAAPSPAHGGRPRRGSPAPTRSS*TSAMWV
Trigger: GACCCACATGGCGCTGGTGCAGCTGGAGCGCGTGGG...GGCTGGAGATCCCCGCCTGGGACGGCCCCCGTGTGCTGGAGAGGGCGCTGCCAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR GCA 90 bp GTGGCAGCGCCCTCTCCAGCACACGGGGGCCGTCCCAGGCGGGGATCTCCAGCCGGCTCTGAGCCGTTGTaGTGGGCGCAGGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VAAPSPAHGGRPRRGSPAGSEPL*WAQGSC
Trigger: GCAGGAGCCCTGCGCCCAGCACAACGGCTCAGAGCC...GGCTGGAGATCCCCGCCTGGGACGGCCCCCGTGTGCTGGAGAGGGCGCTGCCAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp GCCGAGGGGCGGGACGGGTCAGGCGTGGGGGACAGAGGGTGCATGGTGGCCCTGCCCTCAGCTCTCCCCTaGAGGCTCGCAGCCCCCTTG +
Preference number: 4 (lower is better)
Translates to: AEGRDGSGVGDRGCMVALPSALP*RLAAPL
Trigger: CAAGGGGGCTGCGAGCCTGCAGGGGAGAGCTGAGGG...CAGGGCCACCATGCACCCTCTGTCCCCCACGCCTGACCCGTCCCGCCCCTCGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000601571.1
CDS-3UTR CCA 90 bp GCGGTCCTGCCGAGGGGCGGGACGGGTCAGGCGTGGGGGACAGAGGGTGCATGGTGCAGAGCCGGCCCGTaGCCTTCAGGCCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: AVLPRGGTGQAWGTEGAWCRAGP*PSGPWC
Trigger: GCACCATGGGCCTGAAGGCCACGGGCCGGCTCTGCA...CCATGCACCCTCTGTCCCCCACGCCTGACCCGTCCCGCCCCTCGGCAGGACCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601571.1
CDS-3UTR CCA 90 bp TGGCAGCGCCCTCTCCAGCACACGGGGGCCGTCCCAGGCGGGGATCTCCAGCCCATGGTCCAGACTCCGTaGGGACCCCTCCGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: WQRPLQHTGAVPGGDLQPMVQTP*GPLREA
Trigger: GGCCTCCCGGAGGGGTCCCCACGGAGTCTGGACCAT...GGGCTGGAGATCCCCGCCTGGGACGGCCCCCGTGTGCTGGAGAGGGCGCTGCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR TCA 90 bp GGGCGGGACGGGTCAGGCGTGGGGGACAGAGGGTGCATGGTGGCCCTGGGCAGGTGCCAGAGGCAGTGCTaGTGCCGGCACCCGTGTGGA +
Preference number: 4 (lower is better)
Translates to: GRDGSGVGDRGCMVALGRCQRQC*CRHPCG
Trigger: TCCACACGGGTGCCGGCATCAGCACTGCCTCTGGCA...CCTGCCCAGGGCCACCATGCACCCTCTGTCCCCCACGCCTGACCCGTCCCGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601571.1
CDS-3UTR TCA 90 bp GCCCAGGGAGGGACCACGGAGGGCAGGTGTAACCCCTGGCCTGGAGCACAGCTCGGGGCTGGCGGGCTCTaGGCCGTTGTGCTGGGCGCA +
Preference number: 4 (lower is better)
Translates to: AQGGTTEGRCNPWPGAQLGAGGL*AVVLGA
Trigger: TGCGCCCAGCACAACGGCTCAGAGCCCGCCAGCCCC...GAGCTGTGCTCCAGGCCAGGGGTTACACCTGCCCTCCGTGGTCCCTCCCTGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp TGGCAGCGCCCTCTCCAGCACACGGGGGCCGTCCCAGGCGGGGATCTCCAGCCCCCGCTGGGCCGGATCTaGAGCGATGTACCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: WQRPLQHTGAVPGGDLQPPLGRI*SDVPSV
Trigger: CACGCTGGGTACATCGCTGCAGATCCGGCCCAGCGG...GGGCTGGAGATCCCCGCCTGGGACGGCCCCCGTGTGCTGGAGAGGGCGCTGCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp GCGCAGGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGATGCACCAGCGCCATGTaGGTCTGCGTGGGCCGCGCG +
Preference number: 4 (lower is better)
Translates to: AQGSCLGPAGIEPLIRVGCTSAM*VCVGRA
Trigger: CGCGCGGCCCACGCAGACCCACATGGCGCTGGTGCA...TCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp GACAGGTCGGCGTTCCTGCTGGCCTCATCGGCGAGTGCCAGGTCCCGGTCGGGCTGGGCCGCTCCCGTTTaGGGCTGGCGGGCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: DRSAFLLASSASARSRSGWAAPV*GWRALS
Trigger: GCTCAGAGCCCGCCAGCCCCAAACGGGAGCGGCCCA...GCCCGACCGGGACCTGGCACTCGCCGATGAGGCCAGCAGGAACGCCGACCTGTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600938.5
CDS-3UTR CCA 90 bp CGAGGGGCGGGACGGGTCAGGCGTGGGGGACAGAGGGTGCATGGTGGCCCTGGGGGGACAGAGGGTGCATaGTGGCCCTGGGCAGGGGTA +
Preference number: 4 (lower is better)
Translates to: RGAGRVRRGGQRVHGGPGGTEGA*WPWAGV
Trigger: TACCCCTGCCCAGGGCCACCATGCACCCTCTGTCCC...CCCAGGGCCACCATGCACCCTCTGTCCCCCACGCCTGACCCGTCCCGCCCCTCG
72% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000601571.1
CDS-3UTR CCA 90 bp AGCATGGCGGTCCTGCCGAGGGGCGGGACGGGTCAGGCGTGGGGGACAGAGGGTATGCGGAGGTCAGCATaGCGGTCCTGCCGAGGGGCG +
Preference number: 4 (lower is better)
Translates to: SMAVLPRGGTGQAWGTEGMRRSA*RSCRGA
Trigger: CGCCCCTCGGCAGGACCGCCATGCTGACCTCCGCAT...ACCCTCTGTCCCCCACGCCTGACCCGTCCCGCCCCTCGGCAGGACCGCCATGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000601571.1
CDS-3UTR TCA 90 bp CAGGCTCGCAGCCCCCTTGCCTTAGCCACGGTGCAGAGCCGGCCCGTGGCCTTCGTCCCTGGGGAAGCCTaGGCGCACATGGAGCCCGTC +
Preference number: 4 (lower is better)
Translates to: QARSPLALATVQSRPVAFVPGEA*AHMEPV
Trigger: GACGGGCTCCATGTGCGCTCAGGCTTCCCCAGGGAC...GAAGGCCACGGGCCGGCTCTGCACCGTGGCTAAGGCAAGGGGGCTGCGAGCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR GCA 90 bp GCCCAGGGAGGGACCACGGAGGGCAGGTGTAACCCCTGGCCTGGAGCACAGCTCGGCCTCATCGGCGAGTaGCAGGTCCCGGTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: AQGGTTEGRCNPWPGAQLGLIGE*QVPVGQ
Trigger: CTGCCCGACCGGGACCTGGCACTCGCCGATGAGGCC...GAGCTGTGCTCCAGGCCAGGGGTTACACCTGCCCTCCGTGGTCCCTCCCTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337491.7
ENST00000594279.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp CTTGCCTTAGCCACGGTGCAGAGCCGGCCCGTGGCCTTCAGGCCCATGGTGCCCGGCCTCATCGGCGAGTaGCAGGTCCCGGTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: LALATVQSRPVAFRPMVPGLIGE*QVPVGQ
Trigger: CTGCCCGACCGGGACCTGGCACTCGCCGATGAGGCC...GGGCACCATGGGCCTGAAGGCCACGGGCCGGCTCTGCACCGTGGCTAAGGCAAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600938.5
CDS-3UTR CCA 90 bp ACGGTGCAGAGCCGGCCCGTGGCCTTCAGGCCCATGGTGCCCACGACTGTGTCTCCTTGGGCTCCAGCTTaGGGGTGGGCGGGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: TVQSRPVAFRPMVPTTVSPWAPA*GWAGGA
Trigger: TGCCCCGCCCGCCCACCCCCAAGCTGGAGCCCAAGG...AGACACAGTCGTGGGCACCATGGGCCTGAAGGCCACGGGCCGGCTCTGCACCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp GCCCAGGGAGGGACCACGGAGGGCAGGTGTAACCCCTGGCCTGGAGCACAGCTCTGGGCCGCTCCCGTTTaGGGCTGGCGGGCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: AQGGTTEGRCNPWPGAQLWAAPV*GWRALS
Trigger: GCTCAGAGCCCGCCAGCCCCAAACGGGAGCGGCCCA...GAGCTGTGCTCCAGGCCAGGGGTTACACCTGCCCTCCGTGGTCCCTCCCTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp TGGCGGTCCTGCCGAGGGGCGGGACGGGTCAGGCGTGGGGGACAGAGGGTGCATGGTCGGCGTTCCTGCTaGCCTCATCGGCGAGTGCCA +
Preference number: 4 (lower is better)
Translates to: WRSCRGAGRVRRGGQRVHGRRSC*PHRRVP
Trigger: TGGCACTCGCCGATGAGGCCAGCAGGAACGCCGACC...ATGCACCCTCTGTCCCCCACGCCTGACCCGTCCCGCCCCTCGGCAGGACCGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601571.1
3UTR CAA 72 bp GGCTCTGAGCCGTTGTGCTGGGCGCAGGGCTCCTGCTaGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTG +
Preference number: 4 (lower is better)
Translates to: GSEPLCWAQGSC*GPAGIEPLIRV
Trigger: CACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGCGCCCAGCACAACGGCTCAGAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
3UTR CAA 72 bp TGCAGGTTGACGATGACCAGGCGGCCTCCCCGGCGCTaGGTAGCCAGCGGCAGGTTCCCGCTGGGCCGGATC +
Preference number: 4 (lower is better)
Translates to: CRLTMTRRPPRR*VASGRFPLGRI
Trigger: GATCCGGCCCAGCGGGAACCTGCCGCTGGCTACCAAGCGCCGGGGAGGCCGCCTGGTCATCGTCAACCTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR TCA 90 bp GGGTGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGGGGCTGGCGGGCTCTaGGCCGTTGTGCTGGGCGCA +
Preference number: 4 (lower is better)
Translates to: GCGRGSPVTSGVWLLPGTGAGGL*AVVLGA
Trigger: TGCGCCCAGCACAACGGCTCAGAGCCCGCCAGCCCC...GGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR TCA 90 bp CTTGGTAGCCAGCGGCAGGTTCCCGCTGGGCCGGATCTGCAGCGATGTACCCAGGGGGCTGGCGGGCTCTaGGCCGTTGTGCTGGGCGCA +
Preference number: 4 (lower is better)
Translates to: LGSQRQVPAGPDLQRCTQGAGGL*AVVLGA
Trigger: TGCGCCCAGCACAACGGCTCAGAGCCCGCCAGCCCC...CTGGGTACATCGCTGCAGATCCGGCCCAGCGGGAACCTGCCGCTGGCTACCAAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR TCA 90 bp CCTCCCCGGCGCTTGGTAGCCAGCGGCAGGTTCCCGCTGGGCCGGATCTGCAGCCAGCTCTCAGAGCCCTaGGGCTCCCGGGGACAGAAA +
Preference number: 4 (lower is better)
Translates to: PPRRLVASGRFPLGRICSQLSEP*GSRGQK
Trigger: TTTCTGTCCCCGGGAGCCTCAGGGCTCTGAGAGCTG...GCTGCAGATCCGGCCCAGCGGGAACCTGCCGCTGGCTACCAAGCGCCGGGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR GCA 90 bp GCCCAGGGAGGGACCACGGAGGGCAGGTGTAACCCCTGGCCTGGAGCACAGCTCAGCGCCATGTGGGTCTaGGTGGGCCGCGCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: AQGGTTEGRCNPWPGAQLSAMWV*VGRALS
Trigger: TGAGAGCGCGCGGCCCACGCAGACCCACATGGCGCT...GAGCTGTGCTCCAGGCCAGGGGTTACACCTGCCCTCCGTGGTCCCTCCCTGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR GCA 90 bp CTTGCCTTAGCCACGGTGCAGAGCCGGCCCGTGGCCTTCAGGCCCATGGTGCCCAGCGCCATGTGGGTCTaGGTGGGCCGCGCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: LALATVQSRPVAFRPMVPSAMWV*VGRALS
Trigger: TGAGAGCGCGCGGCCCACGCAGACCCACATGGCGCT...GGGCACCATGGGCCTGAAGGCCACGGGCCGGCTCTGCACCGTGGCTAAGGCAAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR GCA 90 bp GCCCAGGGAGGGACCACGGAGGGCAGGTGTAACCCCTGGCCTGGAGCACAGCTCCCCACGCGCTCCAGCTaGACCAGCGCCATGTGGGTC +
Preference number: 4 (lower is better)
Translates to: AQGGTTEGRCNPWPGAQLPTRSS*TSAMWV
Trigger: GACCCACATGGCGCTGGTGCAGCTGGAGCGCGTGGG...GAGCTGTGCTCCAGGCCAGGGGTTACACCTGCCCTCCGTGGTCCCTCCCTGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR GCA 90 bp CCCCCTTGCCTTAGCCACGGTGCAGAGCCGGCCCGTGGCCTTCAGGCCCATGGTGGCTCTGAGCCGTTGTaGTGGGCGCAGGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PPCLSHGAEPARGLQAHGGSEPL*WAQGSC
Trigger: GCAGGAGCCCTGCGCCCAGCACAACGGCTCAGAGCC...ACCATGGGCCTGAAGGCCACGGGCCGGCTCTGCACCGTGGCTAAGGCAAGGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR GCA 90 bp TGCAGGTTGACGATGACCAGGCGGCCTCCCCGGCGCTTGGTAGCCAGCGGCAGGCCCTCAGCTCTCCCCTaGAGGCTCGCAGCCCCCTTG +
Preference number: 4 (lower is better)
Translates to: CRLTMTRRPPRRLVASGRPSALP*RLAAPL
Trigger: CAAGGGGGCTGCGAGCCTGCAGGGGAGAGCTGAGGG...CCTGCCGCTGGCTACCAAGCGCCGGGGAGGCCGCCTGGTCATCGTCAACCTGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000600938.5
CDS-3UTR CCA 90 bp GTCCACGTTCTGGCTGACCAGGAAGCGGAGGAGGCCCACGCGCTCCAGCTGCACTGCACCAGCGCCATGTaGGTCTGCGTGGGCCGCGCG +
Preference number: 4 (lower is better)
Translates to: VHVLADQEAEEAHALQLHCTSAM*VCVGRA
Trigger: CGCGCGGCCCACGCAGACCCACATGGCGCTGGTGCA...GTGCAGCTGGAGCGCGTGGGCCTCCTCCGCTTCCTGGTCAGCCAGAACGTGGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp GTGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGCCCTTGGGCTCCAGCTTaGGGGTGGGCGGGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: VWQGLTCHLWGVASSRNRPWAPA*GWAGGA
Trigger: TGCCCCGCCCGCCCACCCCCAAGCTGGAGCCCAAGG...GCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GTGCTTGGTGGGCTGCAGGTTGACGATGACCAGGCGGCCTCCCCGGCGCTTGGTTGGGCCGCTCCCGTTTaGGGCTGGCGGGCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: VLGGLQVDDDQAASPALGWAAPV*GWRALS
Trigger: GCTCAGAGCCCGCCAGCCCCAAACGGGAGCGGCCCA...ACCAAGCGCCGGGGAGGCCGCCTGGTCATCGTCAACCTGCAGCCCACCAAGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp GTGGCAGCGCCCTCTCCAGCACACGGGGGCCGTCCCAGGCGGGGATCTCCAGCCGGCAGGTGTAACCCCTaGCCTGGAGCACAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: VAAPSPAHGGRPRRGSPAGRCNP*PGAQLS
Trigger: TGAGAGCTGTGCTCCAGGCCAGGGGTTACACCTGCC...GGCTGGAGATCCCCGCCTGGGACGGCCCCCGTGTGCTGGAGAGGGCGCTGCCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR TCA 90 bp GCCCAGGGAGGGACCACGGAGGGCAGGTGTAACCCCTGGCCTGGAGCACAGCTCCGTCCACGTTCTGGCTaGCCAGGAAGCGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: AQGGTTEGRCNPWPGAQLRPRSG*PGSGGG
Trigger: GCCTCCTCCGCTTCCTGGTCAGCCAGAACGTGGACG...GAGCTGTGCTCCAGGCCAGGGGTTACACCTGCCCTCCGTGGTCCCTCCCTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR TCA 90 bp TGCAGGTTGACGATGACCAGGCGGCCTCCCCGGCGCTTGGTAGCCAGCGGCAGGCGTCCACGTTCTGGCTaGCCAGGAAGCGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: CRLTMTRRPPRRLVASGRRPRSG*PGSGGG
Trigger: GCCTCCTCCGCTTCCTGGTCAGCCAGAACGTGGACG...CCTGCCGCTGGCTACCAAGCGCCGGGGAGGCCGCCTGGTCATCGTCAACCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR GCA 90 bp GGGTGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCCCGGGAGGCCGCACTTaGCCTTGTCCGCGTACGGCG +
Preference number: 4 (lower is better)
Translates to: GCGRGSPVTSGVWLLPGTPGGRT*PCPRTA
Trigger: CGCCGTACGCGGACAAGGGCAAGTGCGGCCTCCCGG...GGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp CGAGGGGCGGGACGGGTCAGGCGTGGGGGACAGAGGGTGCATGGTGGCCCTGGGACCACACTGGAAGACTaGCAGACCAGCCTCGCCAGT +
Preference number: 4 (lower is better)
Translates to: RGAGRVRRGGQRVHGGPGTTLED*QTSLAS
Trigger: ACTGGCGAGGCTGGTCTGGCAGTCTTCCAGTGTGGT...CCCAGGGCCACCATGCACCCTCTGTCCCCCACGCCTGACCCGTCCCGCCCCTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601571.1
CDS-3UTR GCA 90 bp TGGCGGTCCTGCCGAGGGGCGGGACGGGTCAGGCGTGGGGGACAGAGGGTGCATCCTTCAGGCCCATGGTaGCCACGACTGTGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: WRSCRGAGRVRRGGQRVHPSGPW*PRLCLG
Trigger: TCCGAGACACAGTCGTGGGCACCATGGGCCTGAAGG...ATGCACCCTCTGTCCCCCACGCCTGACCCGTCCCGCCCCTCGGCAGGACCGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601571.1
CDS-3UTR GCA 90 bp GCCCAGGGAGGGACCACGGAGGGCAGGTGTAACCCCTGGCCTGGAGCACAGCTCCCGCTGGGCCGGATCTaGAGCGATGTACCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: AQGGTTEGRCNPWPGAQLPLGRI*SDVPSV
Trigger: CACGCTGGGTACATCGCTGCAGATCCGGCCCAGCGG...GAGCTGTGCTCCAGGCCAGGGGTTACACCTGCCCTCCGTGGTCCCTCCCTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
CDS-3UTR GCA 90 bp GTGGCAGCGCCCTCTCCAGCACACGGGGGCCGTCCCAGGCGGGGATCTCCAGCCCAACGTAGCCATGGATaGGGAGGTCAGCATGGCGGT +
Preference number: 4 (lower is better)
Translates to: VAAPSPAHGGRPRRGSPAQRSHG*GGQHGG
Trigger: ACCGCCATGCTGACCTCCGCATCCATGGCTACGTTG...GGCTGGAGATCCCCGCCTGGGACGGCCCCCGTGTGCTGGAGAGGGCGCTGCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp GTGGCAGCGCCCTCTCCAGCACACGGGGGCCGTCCCAGGCGGGGATCTCCAGCCATCTCCAGCCCCAGGTaGTTCATGAGCCGGGTCATG +
Preference number: 4 (lower is better)
Translates to: VAAPSPAHGGRPRRGSPAISSPR*FMSRVM
Trigger: CATGACCCGGCTCATGAAGCACCTGGGGCTGGAGAT...GGCTGGAGATCCCCGCCTGGGACGGCCCCCGTGTGCTGGAGAGGGCGCTGCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp GGGGCGGGACGGGTCAGGCGTGGGGGACAGAGGGTGCATGGTGGCCCTGGGCAGATCTCCAGCCCCAGGTaGTTCATGAGCCGGGTCATG +
Preference number: 4 (lower is better)
Translates to: GAGRVRRGGQRVHGGPGQISSPR*FMSRVM
Trigger: CATGACCCGGCTCATGAAGCACCTGGGGCTGGAGAT...CTGCCCAGGGCCACCATGCACCCTCTGTCCCCCACGCCTGACCCGTCCCGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000601571.1
CDS-3UTR GCA 90 bp CAGGGAGGGACCACGGAGGGCAGGTGTAACCCCTGGCCTGGAGCACAGCTCTCATGGGCGCAGGGCTCCTaGTTGGGGCCGGCGGGGATA +
Preference number: 4 (lower is better)
Translates to: QGGTTEGRCNPWPGAQLSWAQGS*LGPAGI
Trigger: TATCCCCGCCGGCCCCAAGCAGGAGCCCTGCGCCCA...TGAGAGCTGTGCTCCAGGCCAGGGGTTACACCTGCCCTCCGTGGTCCCTCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp TTCCCGCTGGGCCGGATCTGCAGCGATGTACCCAGCGTGATGGACAGGTCGGCGTGGGCGCAGGGCTCCTaGTTGGGGCCGGCGGGGATA +
Preference number: 4 (lower is better)
Translates to: FPLGRICSDVPSVMDRSAWAQGS*LGPAGI
Trigger: TATCCCCGCCGGCCCCAAGCAGGAGCCCTGCGCCCA...CGCCGACCTGTCCATCACGCTGGGTACATCGCTGCAGATCCGGCCCAGCGGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR GCA 90 bp TGGCAGCGCCCTCTCCAGCACACGGGGGCCGTCCCAGGCGGGGATCTCCAGCCCCAGCCCCAAAGGCAGTaGAAGCCTCTACTGATCCCC +
Preference number: 4 (lower is better)
Translates to: WQRPLQHTGAVPGGDLQPQPQRQ*KPLLIP
Trigger: GGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTG...GGGCTGGAGATCCCCGCCTGGGACGGCCCCCGTGTGCTGGAGAGGGCGCTGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp CAGGGAGGGACCACGGAGGGCAGGTGTAACCCCTGGCCTGGAGCACAGCTCTCAGGCCTCATCGGCGAGTaGCAGGTCCCGGTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: QGGTTEGRCNPWPGAQLSGLIGE*QVPVGQ
Trigger: CTGCCCGACCGGGACCTGGCACTCGCCGATGAGGCC...TGAGAGCTGTGCTCCAGGCCAGGGGTTACACCTGCCCTCCGTGGTCCCTCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337491.7
ENST00000594279.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp CCTCGTCAACGTAGCCATGGATGCGGAGGTCAGCATGGCGGTCCTGCCGAGGGGTCAGCATGGCGGTCCTaGCGAGGGGCGGGACGGGTC +
Preference number: 4 (lower is better)
Translates to: PRQRSHGCGGQHGGPAEGSAWRS*RGAGRV
Trigger: GACCCGTCCCGCCCCTCGGCAGGACCGCCATGCTGA...CCCCTCGGCAGGACCGCCATGCTGACCTCCGCATCCATGGCTACGTTGACGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601571.1
CDS-3UTR CCA 90 bp GCAGGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAGACCATGTGGGTCTGCGTaGGCCGCGCGCTCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: AGLLLGAGGDRAVDPGGRPCGSA*AARSQR
Trigger: CCTTTGAGAGCGCGCGGCCCACGCAGACCCACATGG...TCTCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp GACAGGTCGGCGTTCCTGCTGGCCTCATCGGCGAGTGCCAGGTCCCGGTCGGGCAGCCCGTCCACGTTCTaGCTGACCAGGAAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: DRSAFLLASSASARSRSGSPSTF*LTRKRR
Trigger: CCTCCGCTTCCTGGTCAGCCAGAACGTGGACGGGCT...GCCCGACCGGGACCTGGCACTCGCCGATGAGGCCAGCAGGAACGCCGACCTGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600938.5
CDS-3UTR CCA 90 bp CAGGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAGATTGCAGAGCCGGCCCGTaGCCTTCAGGCCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: QGSCLGPAGIEPLIRVGDCRAGP*PSGPWC
Trigger: GCACCATGGGCCTGAAGGCCACGGGCCGGCTCTGCA...ATCTCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp TCCCCGGCGCTTGGTAGCCAGCGGCAGGTTCCCGCTGGGCCGGATCTGCAGCGAATGCGGAGGTCAGCATaGCGGTCGTGCTTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: SPALGSQRQVPAGPDLQRMRRSA*RSCLVG
Trigger: GCCCACCAAGCACGACCGCCATGCTGACCTCCGCAT...TCGCTGCAGATCCGGCCCAGCGGGAACCTGCCGCTGGCTACCAAGCGCCGGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp GCGCAGGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAATGCGGAGGTCAGCATaGCGGTCGTGCTTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: AQGSCLGPAGIEPLIRVGMRRSA*RSCLVG
Trigger: GCCCACCAAGCACGACCGCCATGCTGACCTCCGCAT...TCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GCGCAGGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGATCTGAGCCGTTGTGCTaGGCGCAGGGCTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: AQGSCLGPAGIEPLIRVGSEPLC*AQGSCL
Trigger: CAAGCAGGAGCCCTGCGCCCAGCACAACGGCTCAGA...TCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp CAGGGAGGGACCACGGAGGGCAGGTGTAACCCCTGGCCTGGAGCACAGCTCTCATGGGCCGCTCCCGTTTaGGGCTGGCGGGCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: QGGTTEGRCNPWPGAQLSWAAPV*GWRALS
Trigger: GCTCAGAGCCCGCCAGCCCCAAACGGGAGCGGCCCA...TGAGAGCTGTGCTCCAGGCCAGGGGTTACACCTGCCCTCCGTGGTCCCTCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GCGCAGGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAAGCTGGGGACCGCCTTaGCCTTCACCCTTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: AQGSCLGPAGIEPLIRVGSWGPP*PSPFWG
Trigger: CCCCCAAAAGGGTGAAGGCCAAGGCGGTCCCCAGCT...TCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp CCCCCTTGCCTTAGCCACGGTGCAGAGCCGGCCCGTGGCCTTCAGGCCCATGGTCCTCCCCAAGCACCCTaGTCAGCTGGGGACCGCCTT +
Preference number: 4 (lower is better)
Translates to: PPCLSHGAEPARGLQAHGPPQAP*SAGDRL
Trigger: AAGGCGGTCCCCAGCTGACCAGGGTGCTTGGGGAGG...ACCATGGGCCTGAAGGCCACGGGCCGGCTCTGCACCGTGGCTAAGGCAAGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp TGGCAGCGCCCTCTCCAGCACACGGGGGCCGTCCCAGGCGGGGATCTCCAGCCCCACTCCTGTTTAAGCTaGAGACCAGGGAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: WQRPLQHTGAVPGGDLQPHSCLS*RPGRAQ
Trigger: CTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTG...GGGCTGGAGATCCCCGCCTGGGACGGCCCCCGTGTGCTGGAGAGGGCGCTGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GCCCAGGGAGGGACCACGGAGGGCAGGTGTAACCCCTGGCCTGGAGCACAGCTCGGAGGAGGGGTAGGGTaGGCTGTAGGGGGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: AQGGTTEGRCNPWPGAQLGGGVG*AVGGPE
Trigger: TTCTGGGCCCCCTACAGCCCACCCTACCCCTCCTCC...GAGCTGTGCTCCAGGCCAGGGGTTACACCTGCCCTCCGTGGTCCCTCCCTGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp TGCCGAGGGGCGGGACGGGTCAGGCGTGGGGGACAGAGGGTGCATGGTGGCCCTCCTCCCAGTCTAGGATaGTGTCCCTCAGCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: CRGAGRVRRGGQRVHGGPPPSLG*CPSALP
Trigger: GGGGAGAGCTGAGGGACACCATCCTAGACTGGGAGG...AGGGCCACCATGCACCCTCTGTCCCCCACGCCTGACCCGTCCCGCCCCTCGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601571.1
CDS-3UTR TCA 90 bp CAGGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAGATTGCCAGAGGCAGTGCTaGTGCCGGCACCCGTGTGGA +
Preference number: 4 (lower is better)
Translates to: QGSCLGPAGIEPLIRVGDCQRQC*CRHPCG
Trigger: TCCACACGGGTGCCGGCATCAGCACTGCCTCTGGCA...ATCTCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594279.5
ENST00000601488.5
CDS-3UTR GCA 90 bp CAGGGAGGGACCACGGAGGGCAGGTGTAACCCCTGGCCTGGAGCACAGCTCTCAAGCGCCATGTGGGTCTaGGTGGGCCGCGCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: QGGTTEGRCNPWPGAQLSSAMWV*VGRALS
Trigger: TGAGAGCGCGCGGCCCACGCAGACCCACATGGCGCT...TGAGAGCTGTGCTCCAGGCCAGGGGTTACACCTGCCCTCCGTGGTCCCTCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR GCA 90 bp GGGTGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCCCCACGCGCTCCAGCTaGACCAGCGCCATGTGGGTC +
Preference number: 4 (lower is better)
Translates to: GCGRGSPVTSGVWLLPGTPTRSS*TSAMWV
Trigger: GACCCACATGGCGCTGGTGCAGCTGGAGCGCGTGGG...GGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR GCA 90 bp TGGCGGTCCTGCCGAGGGGCGGGACGGGTCAGGCGTGGGGGACAGAGGGTGCATCAACGTAGCCATGGATaGGGAGGTCAGCATGGCGGT +
Preference number: 4 (lower is better)
Translates to: WRSCRGAGRVRRGGQRVHQRSHG*GGQHGG
Trigger: ACCGCCATGCTGACCTCCGCATCCATGGCTACGTTG...ATGCACCCTCTGTCCCCCACGCCTGACCCGTCCCGCCCCTCGGCAGGACCGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601571.1
CDS-3UTR GCA 90 bp TTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAGATTCCTCCTTGGGCGGCTCTGAGCCGTTGTaGTGGGCGCAGGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LGPAGIEPLIRVGDSSLGGSEPL*WAQGSC
Trigger: GCAGGAGCCCTGCGCCCAGCACAACGGCTCAGAGCC...GCCCAAGGAGGAATCTCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp GTGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGCGTGGGTCTCCCCTCCTaGAGGGCCCATGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: VWQGLTCHLWGVASSRNRVGLPS*RAHGGG
Trigger: CCCTCCTCCATGGGCCCTGCAGGAGGGGAGACCCAC...GCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp GGGTGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGTGGGTCTCCCCTCCTaGAGGGCCCATGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: GCGRGSPVTSGVWLLPGTVGLPS*RAHGGG
Trigger: CCCTCCTCCATGGGCCCTGCAGGAGGGGAGACCCAC...GGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp TGGCGGTCCTGCCGAGGGGCGGGACGGGTCAGGCGTGGGGGACAGAGGGTGCATGCTCAGACACCTACGTaGTTGGTGGGCTGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: WRSCRGAGRVRRGGQRVHAQTPT*LVGCRL
Trigger: CAACCTGCAGCCCACCAAGCACGTAGGTGTCTGAGC...ATGCACCCTCTGTCCCCCACGCCTGACCCGTCCCGCCCCTCGGCAGGACCGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601571.1
CDS-3UTR CCA 90 bp GCGGTCCTGCCGAGGGGCGGGACGGGTCAGGCGTGGGGGACAGAGGGTGCATGGTGTGGAACACCACACTaGAAGACTGCCAGACCAGCC +
Preference number: 4 (lower is better)
Translates to: AVLPRGGTGQAWGTEGAWCGTPH*KTARPA
Trigger: GGCTGGTCTGGCAGTCTTCCAGTGTGGTGTTCCACA...CCATGCACCCTCTGTCCCCCACGCCTGACCCGTCCCGCCCCTCGGCAGGACCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601571.1
CDS-3UTR CCA 90 bp TGCCGAGGGGCGGGACGGGTCAGGCGTGGGGGACAGAGGGTGCATGGTGGCCCTATGCCGGCACCCGTGTaGAACACCACACTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: CRGAGRVRRGGQRVHGGPMPAPV*NTTLED
Trigger: GTCTTCCAGTGTGGTGTTCCACACGGGTGCCGGCAT...AGGGCCACCATGCACCCTCTGTCCCCCACGCCTGACCCGTCCCGCCCCTCGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601571.1
CDS-3UTR CCA 90 bp GCGCAGGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAGCGCGCTCTCAAAGGTaGTGTCGAACTTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: AQGSCLGPAGIEPLIRVGARSQR*CRTWGP
Trigger: TGGCCCCCAAGTTCGACACCACCTTTGAGAGCGCGC...TCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp CAGGCTCGCAGCCCCCTTGCCTTAGCCACGGTGCAGAGCCGGCCCGTGGCCTTCGCGCGCTCTCAAAGGTaGTGTCGAACTTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: QARSPLALATVQSRPVAFARSQR*CRTWGP
Trigger: TGGCCCCCAAGTTCGACACCACCTTTGAGAGCGCGC...GAAGGCCACGGGCCGGCTCTGCACCGTGGCTAAGGCAAGGGGGCTGCGAGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp GGGTGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCTGCAGAGCCGGCCCGTaGCCTTCAGGCCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: GCGRGSPVTSGVWLLPGTCRAGP*PSGPWC
Trigger: GCACCATGGGCCTGAAGGCCACGGGCCGGCTCTGCA...GGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp CTCGTCAACGTAGCCATGGATGCGGAGGTCAGCATGGCGGTCCTGCCGAGGGGCGCGGCAGGTTCCCGCTaGGCCGGATCTGCAGCGATG +
Preference number: 4 (lower is better)
Translates to: LVNVAMDAEVSMAVLPRGAAGSR*AGSAAM
Trigger: CATCGCTGCAGATCCGGCCCAGCGGGAACCTGCCGC...GCCCCTCGGCAGGACCGCCATGCTGACCTCCGCATCCATGGCTACGTTGACGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601571.1
CDS-3UTR CCA 90 bp ACCCACGTCTCCCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACCCTTGGGCTCCAGCTTaGGGGTGGGCGGGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: THVSLQPQRQCKPLLIPHPWAPA*GWAGGA
Trigger: TGCCCCGCCCGCCCACCCCCAAGCTGGAGCCCAAGG...GTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGGGAGACGTGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GCAGGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAGATCTGAGCCGTTGTGCTaGGCGCAGGGCTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: AGLLLGAGGDRAVDPGGRSEPLC*AQGSCL
Trigger: CAAGCAGGAGCCCTGCGCCCAGCACAACGGCTCAGA...TCTCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GTGCTTGGTGGGCTGCAGGTTGACGATGACCAGGCGGCCTCCCCGGCGCTTGGTGGTCGGCGTTCCTGCTaGCCTCATCGGCGAGTGCCA +
Preference number: 4 (lower is better)
Translates to: VLGGLQVDDDQAASPALGGRRSC*PHRRVP
Trigger: TGGCACTCGCCGATGAGGCCAGCAGGAACGCCGACC...ACCAAGCGCCGGGGAGGCCGCCTGGTCATCGTCAACCTGCAGCCCACCAAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600938.5
CDS-3UTR TCA 90 bp CAGGGAGGGACCACGGAGGGCAGGTGTAACCCCTGGCCTGGAGCACAGCTCTCATGCCAGAGGCAGTGCTaGTGCCGGCACCCGTGTGGA +
Preference number: 4 (lower is better)
Translates to: QGGTTEGRCNPWPGAQLSCQRQC*CRHPCG
Trigger: TCCACACGGGTGCCGGCATCAGCACTGCCTCTGGCA...TGAGAGCTGTGCTCCAGGCCAGGGGTTACACCTGCCCTCCGTGGTCCCTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000601488.5
CDS-3UTR TCA 90 bp GTGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGCCGTCCACGTTCTGGCTaGCCAGGAAGCGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: VWQGLTCHLWGVASSRNRRPRSG*PGSGGG
Trigger: GCCTCCTCCGCTTCCTGGTCAGCCAGAACGTGGACG...GCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR TCA 90 bp GTGCTTGGTGGGCTGCAGGTTGACGATGACCAGGCGGCCTCCCCGGCGCTTGGTGCGATGTACCCAGCGTaGTGGACAGGTCGGCGTTCC +
Preference number: 4 (lower is better)
Translates to: VLGGLQVDDDQAASPALGAMYPA*WTGRRS
Trigger: GGAACGCCGACCTGTCCATCACGCTGGGTACATCGC...ACCAAGCGCCGGGGAGGCCGCCTGGTCATCGTCAACCTGCAGCCCACCAAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR TCA 90 bp CCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTCTCCCCGGGGCTGGCGGGCTCTaGGCCGTTGTGCTGGGCGCA +
Preference number: 4 (lower is better)
Translates to: PQRQCKPLLIPHFKVGLPGAGGL*AVVLGA
Trigger: TGCGCCCAGCACAACGGCTCAGAGCCCGCCAGCCCC...GGGGAGACCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR TCA 90 bp TCACCTCTGGACAACACAGCAAGTCAGAGGCTGGGGTGTGGCAGGGGCTCACCTGGGGCTGGCGGGCTCTaGGCCGTTGTGCTGGGCGCA +
Preference number: 4 (lower is better)
Translates to: SPLDNTASQRLGCGRGSPGAGGL*AVVLGA
Trigger: TGCGCCCAGCACAACGGCTCAGAGCCCGCCAGCCCC...AGGTGAGCCCCTGCCACACCCCAGCCTCTGACTTGCTGTGTTGTCCAGAGGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR TCA 90 bp CCTGGGGACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGGGGCTGGCGGGCTCTaGGCCGTTGTGCTGGGCGCA +
Preference number: 4 (lower is better)
Translates to: PGDRGSSLLFKLETREGPGAGGL*AVVLGA
Trigger: TGCGCCCAGCACAACGGCTCAGAGCCCGCCAGCCCC...TGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTCCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR TCA 90 bp GGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAGATTCCAGCTCTCAGAGCCCTaGGGCTCCCGGGGACAGAAA +
Preference number: 4 (lower is better)
Translates to: GLLLGAGGDRAVDPGGRFQLSEP*GSRGQK
Trigger: TTTCTGTCCCCGGGAGCCTCAGGGCTCTGAGAGCTG...GAATCTCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp GGCCCTGGGGACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCGGGAGGCCGCACTTaGCCTTGTCCGCGTACGGCG +
Preference number: 4 (lower is better)
Translates to: GPGDRGSSLLFKLETREGPGGRT*PCPRTA
Trigger: CGCCGTACGCGGACAAGGGCAAGTGCGGCCTCCCGG...GCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTCCCCAGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp GCGCAGGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAACCACACTGGAAGACTaGCAGACCAGCCTCGCCAGT +
Preference number: 4 (lower is better)
Translates to: AQGSCLGPAGIEPLIRVGTTLED*QTSLAS
Trigger: ACTGGCGAGGCTGGTCTGGCAGTCTTCCAGTGTGGT...TCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594279.5
ENST00000601488.5
CDS-3UTR GCA 90 bp TCCCCGGCGCTTGGTAGCCAGCGGCAGGTTCCCGCTGGGCCGGATCTGCAGCGAGTTCCCGTGGAGCTCTaGCAGTTTGTCCCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: SPALGSQRQVPAGPDLQRVPVEL*QFVPGE
Trigger: TTCCCCAGGGACAAACTGGCAGAGCTCCACGGGAAC...TCGCTGCAGATCCGGCCCAGCGGGAACCTGCCGCTGGCTACCAAGCGCCGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR GCA 90 bp GTGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGCGGCTCGCAGCCCCCTTaGCTTAGCCACGGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: VWQGLTCHLWGVASSRNRGSQPP*LSHGAE
Trigger: CTCTGCACCGTGGCTAAGGCAAGGGGGCTGCGAGCC...GCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp CCTCGTCAACGTAGCCATGGATGCGGAGGTCAGCATGGCGGTCCTGCCGAGGGGGGCTCGCAGCCCCCTTaGCTTAGCCACGGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: PRQRSHGCGGQHGGPAEGGSQPP*LSHGAE
Trigger: CTCTGCACCGTGGCTAAGGCAAGGGGGCTGCGAGCC...CCCCTCGGCAGGACCGCCATGCTGACCTCCGCATCCATGGCTACGTTGACGAGG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000601571.1
CDS-3UTR GCA 90 bp ACCCACGTCTCCCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTGGGCGCAGGGCTCCTaGTTGGGGCCGGCGGGGATA +
Preference number: 4 (lower is better)
Translates to: THVSLQPQRQCKPLLIPHWAQGS*LGPAGI
Trigger: TATCCCCGCCGGCCCCAAGCAGGAGCCCTGCGCCCA...GTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGGGAGACGTGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp ACCCACGTCTCCCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTGCACCAGCGCCATGTaGGTCTGCGTGGGCCGCGCG +
Preference number: 4 (lower is better)
Translates to: THVSLQPQRQCKPLLIPHCTSAM*VCVGRA
Trigger: CGCGCGGCCCACGCAGACCCACATGGCGCTGGTGCA...GTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGGGAGACGTGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp GTGCTTGGTGGGCTGCAGGTTGACGATGACCAGGCGGCCTCCCCGGCGCTTGGTAGCCCGTCCACGTTCTaGCTGACCAGGAAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: VLGGLQVDDDQAASPALGSPSTF*LTRKRR
Trigger: CCTCCGCTTCCTGGTCAGCCAGAACGTGGACGGGCT...ACCAAGCGCCGGGGAGGCCGCCTGGTCATCGTCAACCTGCAGCCCACCAAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp CCCCCTTGCCTTAGCCACGGTGCAGAGCCGGCCCGTGGCCTTCAGGCCCATGGTTGGCCTTCAGGCCCATaGTGCCCACGACTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: PPCLSHGAEPARGLQAHGWPSGP*CPRLCL
Trigger: GAGACACAGTCGTGGGCACCATGGGCCTGAAGGCCA...ACCATGGGCCTGAAGGCCACGGGCCGGCTCTGCACCGTGGCTAAGGCAAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp TGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGCAGCGGCAGGTTCCCGCTaGGCCGGATCTGCAGCGATG +
Preference number: 4 (lower is better)
Translates to: CGRGSPVTSGVWLLPGTAAAGSR*AGSAAM
Trigger: CATCGCTGCAGATCCGGCCCAGCGGGAACCTGCCGC...TGCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp CCTGGGGACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCACCTTGGGCTCCAGCTTaGGGGTGGGCGGGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: PGDRGSSLLFKLETREGPPWAPA*GWAGGA
Trigger: TGCCCCGCCCGCCCACCCCCAAGCTGGAGCCCAAGG...TGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTCCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAGATTCTCTGAGCCGTTGTGCTaGGCGCAGGGCTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: GLLLGAGGDRAVDPGGRFSEPLC*AQGSCL
Trigger: CAAGCAGGAGCCCTGCGCCCAGCACAACGGCTCAGA...GAATCTCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp CAGGGAGGGACCACGGAGGGCAGGTGTAACCCCTGGCCTGGAGCACAGCTCTCAGCTCCCGTTTGGGGCTaGCGGGCTCTGAGCCGTTGT +
Preference number: 4 (lower is better)
Translates to: QGGTTEGRCNPWPGAQLSAPVWG*RALSRC
Trigger: ACAACGGCTCAGAGCCCGCCAGCCCCAAACGGGAGC...TGAGAGCTGTGCTCCAGGCCAGGGGTTACACCTGCCCTCCGTGGTCCCTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GTGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGCGCTCCCGTTTGGGGCTaGCGGGCTCTGAGCCGTTGT +
Preference number: 4 (lower is better)
Translates to: VWQGLTCHLWGVASSRNRAPVWG*RALSRC
Trigger: ACAACGGCTCAGAGCCCGCCAGCCCCAAACGGGAGC...GCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GCCAGCGGCAGGTTCCCGCTGGGCCGGATCTGCAGCGATGTACCCAGCGTGATGAGCTGGGGACCGCCTTaGCCTTCACCCTTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: ASGRFPLGRICSDVPSVMSWGPP*PSPFWG
Trigger: CCCCCAAAAGGGTGAAGGCCAAGGCGGTCCCCAGCT...CATCACGCTGGGTACATCGCTGCAGATCCGGCCCAGCGGGAACCTGCCGCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp CTTGGTAGCCAGCGGCAGGTTCCCGCTGGGCCGGATCTGCAGCGATGTACCCAGCCTCCCCAAGCACCCTaGTCAGCTGGGGACCGCCTT +
Preference number: 4 (lower is better)
Translates to: LGSQRQVPAGPDLQRCTQPPQAP*SAGDRL
Trigger: AAGGCGGTCCCCAGCTGACCAGGGTGCTTGGGGAGG...CTGGGTACATCGCTGCAGATCCGGCCCAGCGGGAACCTGCCGCTGGCTACCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp TGCAGGTTGACGATGACCAGGCGGCCTCCCCGGCGCTTGGTAGCCAGCGGCAGGGTCACCTCTGGGGTGTaGCTTCTTCCCGGAACCGCA +
Preference number: 4 (lower is better)
Translates to: CRLTMTRRPPRRLVASGRVTSGV*LLPGTA
Trigger: TGCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGAC...CCTGCCGCTGGCTACCAAGCGCCGGGGAGGCCGCCTGGTCATCGTCAACCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp GGGTGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGGAGGAGGGGTAGGGTaGGCTGTAGGGGGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: GCGRGSPVTSGVWLLPGTGGGVG*AVGGPE
Trigger: TTCTGGGCCCCCTACAGCCCACCCTACCCCTCCTCC...GGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GCCCAGGGAGGGACCACGGAGGGCAGGTGTAACCCCTGGCCTGGAGCACAGCTCCCTCCCAGTCTAGGATaGTGTCCCTCAGCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: AQGGTTEGRCNPWPGAQLPPSLG*CPSALP
Trigger: GGGGAGAGCTGAGGGACACCATCCTAGACTGGGAGG...GAGCTGTGCTCCAGGCCAGGGGTTACACCTGCCCTCCGTGGTCCCTCCCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337491.7
ENST00000594279.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR TCA 90 bp GAGCCGGGTCATGACCTCGTCAACGTAGCCATGGATGCGGAGGTCAGCATGGCGGTCCCTGGGGAAGCCTaGGCGCACATGGAGCCCGTC +
Preference number: 4 (lower is better)
Translates to: EPGHDLVNVAMDAEVSMAVPGEA*AHMEPV
Trigger: GACGGGCTCCATGTGCGCTCAGGCTTCCCCAGGGAC...CGCCATGCTGACCTCCGCATCCATGGCTACGTTGACGAGGTCATGACCCGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR TCA 90 bp CCTCGTCAACGTAGCCATGGATGCGGAGGTCAGCATGGCGGTCCTGCCGAGGGGGCGATGTACCCAGCGTaGTGGACAGGTCGGCGTTCC +
Preference number: 4 (lower is better)
Translates to: PRQRSHGCGGQHGGPAEGAMYPA*WTGRRS
Trigger: GGAACGCCGACCTGTCCATCACGCTGGGTACATCGC...CCCCTCGGCAGGACCGCCATGCTGACCTCCGCATCCATGGCTACGTTGACGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601571.1
CDS-3UTR GCA 90 bp GGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAGATTCCCTTCAGGCCCATGGTaGCCACGACTGTGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: GLLLGAGGDRAVDPGGRFPSGPW*PRLCLG
Trigger: TCCGAGACACAGTCGTGGGCACCATGGGCCTGAAGG...GAATCTCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp GACCCACGTCTCCCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCAGGCTCTGAGCCGTTGTaGTGGGCGCAGGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: DPRLPPAPKAVQASTDPPGSEPL*WAQGSC
Trigger: GCAGGAGCCCTGCGCCCAGCACAACGGCTCAGAGCC...TGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGGGAGACGTGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp GCCCAGGGAGGGACCACGGAGGGCAGGTGTAACCCCTGGCCTGGAGCACAGCTCCAGCCCCAAAGGCAGTaGAAGCCTCTACTGATCCCC +
Preference number: 4 (lower is better)
Translates to: AQGGTTEGRCNPWPGAQLQPQRQ*KPLLIP
Trigger: GGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTG...GAGCTGTGCTCCAGGCCAGGGGTTACACCTGCCCTCCGTGGTCCCTCCCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp CCCCCTTGCCTTAGCCACGGTGCAGAGCCGGCCCGTGGCCTTCAGGCCCATGGTCAGCCCCAAAGGCAGTaGAAGCCTCTACTGATCCCC +
Preference number: 4 (lower is better)
Translates to: PPCLSHGAEPARGLQAHGQPQRQ*KPLLIP
Trigger: GGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTG...ACCATGGGCCTGAAGGCCACGGGCCGGCTCTGCACCGTGGCTAAGGCAAGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR GCA 90 bp GGCCCTGGGGACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCCTCAGCTCTCCCCTaGAGGCTCGCAGCCCCCTTG +
Preference number: 4 (lower is better)
Translates to: GPGDRGSSLLFKLETREGPSALP*RLAAPL
Trigger: CAAGGGGGCTGCGAGCCTGCAGGGGAGAGCTGAGGG...GCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTCCCCAGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000337491.7
ENST00000594279.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GCCCAGGGAGGGACCACGGAGGGCAGGTGTAACCCCTGGCCTGGAGCACAGCTCATGCCGGCACCCGTGTaGAACACCACACTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: AQGGTTEGRCNPWPGAQLMPAPV*NTTLED
Trigger: GTCTTCCAGTGTGGTGTTCCACACGGGTGCCGGCAT...GAGCTGTGCTCCAGGCCAGGGGTTACACCTGCCCTCCGTGGTCCCTCCCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GCAGGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAGAATGCCGGCACCCGTGTaGAACACCACACTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: AGLLLGAGGDRAVDPGGRMPAPV*NTTLED
Trigger: GTCTTCCAGTGTGGTGTTCCACACGGGTGCCGGCAT...TCTCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594279.5
ENST00000601488.5
CDS-3UTR CCA 90 bp CAGGGAGGGACCACGGAGGGCAGGTGTAACCCCTGGCCTGGAGCACAGCTCTCAATGGTCCAGACTCCGTaGGGACCCCTGAAGTCGGGG +
Preference number: 4 (lower is better)
Translates to: QGGTTEGRCNPWPGAQLSMVQTP*GPLKSG
Trigger: CCCCGACTTCAGGGGTCCCCACGGAGTCTGGACCAT...TGAGAGCTGTGCTCCAGGCCAGGGGTTACACCTGCCCTCCGTGGTCCCTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
CDS-3UTR CCA 90 bp CAGGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAGATAGGTGGTGTCGAACTTaGGGGCCAGACCTCGCTCCT +
Preference number: 4 (lower is better)
Translates to: QGSCLGPAGIEPLIRVGDRWCRT*GPDLAP
Trigger: AGGAGCGAGGTCTGGCCCCCAAGTTCGACACCACCT...ATCTCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp TGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGCACCATGTGGGTCTGCGTaGGCCGCGCGCTCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: CGRGSPVTSGVWLLPGTAPCGSA*AARSQR
Trigger: CCTTTGAGAGCGCGCGGCCCACGCAGACCCACATGG...TGCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp GCGCTTGGTAGCCAGCGGCAGGTTCCCGCTGGGCCGGATCTGCAGCGATGTACCAAGCCTGAGCGCACATaGAGCCCGTCCACGTTCTGG +
Preference number: 4 (lower is better)
Translates to: ALGSQRQVPAGPDLQRCTKPERT*SPSTFW
Trigger: CCAGAACGTGGACGGGCTCCATGTGCGCTCAGGCTT...GGTACATCGCTGCAGATCCGGCCCAGCGGGAACCTGCCGCTGGCTACCAAGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp GACCCACGTCTCCCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCAGCGGCAGGTTCCCGCTaGGCCGGATCTGCAGCGATG +
Preference number: 4 (lower is better)
Translates to: DPRLPPAPKAVQASTDPPAAGSR*AGSAAM
Trigger: CATCGCTGCAGATCCGGCCCAGCGGGAACCTGCCGC...TGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGGGAGACGTGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp CAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTCTCCCTTGGGCTCCAGCTTaGGGGTGGGCGGGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: QPQRQCKPLLIPHFKVGLPWAPA*GWAGGA
Trigger: TGCCCCGCCCGCCCACCCCCAAGCTGGAGCCCAAGG...GAGACCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp TCACCTCTGGACAACACAGCAAGTCAGAGGCTGGGGTGTGGCAGGGGCTCACCTTGGGCCGCTCCCGTTTaGGGCTGGCGGGCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: SPLDNTASQRLGCGRGSPWAAPV*GWRALS
Trigger: GCTCAGAGCCCGCCAGCCCCAAACGGGAGCGGCCCA...AGGTGAGCCCCTGCCACACCCCAGCCTCTGACTTGCTGTGTTGTCCAGAGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp CAGGGAGGGACCACGGAGGGCAGGTGTAACCCCTGGCCTGGAGCACAGCTCTCAAGCTGGGGACCGCCTTaGCCTTCACCCTTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: QGGTTEGRCNPWPGAQLSSWGPP*PSPFWG
Trigger: CCCCCAAAAGGGTGAAGGCCAAGGCGGTCCCCAGCT...TGAGAGCTGTGCTCCAGGCCAGGGGTTACACCTGCCCTCCGTGGTCCCTCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GTGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGCAGCTGGGGACCGCCTTaGCCTTCACCCTTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: VWQGLTCHLWGVASSRNRSWGPP*PSPFWG
Trigger: CCCCCAAAAGGGTGAAGGCCAAGGCGGTCCCCAGCT...GCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp TCGGCGAGTGCCAGGTCCCGGTCGGGCAGGGAGTCCTCCCAGTCTAGGATGGTGGTCACCTCTGGGGTGTaGCTTCTTCCCGGAACCGCA +
Preference number: 4 (lower is better)
Translates to: SASARSRSGRESSQSRMVVTSGV*LLPGTA
Trigger: TGCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGAC...CACCATCCTAGACTGGGAGGACTCCCTGCCCGACCGGGACCTGGCACTCGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600938.5
CDS-3UTR CCA 90 bp CAGGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAGATGTCACCTCTGGGGTGTaGCTTCTTCCCGGAACCGCA +
Preference number: 4 (lower is better)
Translates to: QGSCLGPAGIEPLIRVGDVTSGV*LLPGTA
Trigger: TGCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGAC...ATCTCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GGGTGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCTCCCCCACTTCAAGGTaGGTCTCCCCTCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GCGRGSPVTSGVWLLPGTSPTSR*VSPPAG
Trigger: CCCTGCAGGAGGGGAGACCCACCTTGAAGTGGGGGA...GGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GTGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGCTCCCCCACTTCAAGGTaGGTCTCCCCTCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: VWQGLTCHLWGVASSRNRSPTSR*VSPPAG
Trigger: CCCTGCAGGAGGGGAGACCCACCTTGAAGTGGGGGA...GCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR TCA 90 bp GGCCCTGGGGACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCGTCCACGTTCTGGCTaGCCAGGAAGCGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: GPGDRGSSLLFKLETREGRPRSG*PGSGGG
Trigger: GCCTCCTCCGCTTCCTGGTCAGCCAGAACGTGGACG...GCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTCCCCAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR TCA 90 bp TGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGCACAGCTCTCAGAGCCCTaGGGCTCCCGGGGACAGAAA +
Preference number: 4 (lower is better)
Translates to: CGRGSPVTSGVWLLPGTAQLSEP*GSRGQK
Trigger: TTTCTGTCCCCGGGAGCCTCAGGGCTCTGAGAGCTG...TGCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp CATGACCTCGTCAACGTAGCCATGGATGCGGAGGTCAGCATGGCGGTCGTGCTTCCGGGAGGCCGCACTTaGCCTTGTCCGCGTACGGCG +
Preference number: 4 (lower is better)
Translates to: HDLVNVAMDAEVSMAVVLPGGRT*PCPRTA
Trigger: CGCCGTACGCGGACAAGGGCAAGTGCGGCCTCCCGG...AAGCACGACCGCCATGCTGACCTCCGCATCCATGGCTACGTTGACGAGGTCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR GCA 90 bp CAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTCTCCCGGGAGGCCGCACTTaGCCTTGTCCGCGTACGGCG +
Preference number: 4 (lower is better)
Translates to: QPQRQCKPLLIPHFKVGLPGGRT*PCPRTA
Trigger: CGCCGTACGCGGACAAGGGCAAGTGCGGCCTCCCGG...GAGACCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp CCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTCTCCCCAGCGCCATGTGGGTCTaGGTGGGCCGCGCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: PQRQCKPLLIPHFKVGLPSAMWV*VGRALS
Trigger: TGAGAGCGCGCGGCCCACGCAGACCCACATGGCGCT...GGGGAGACCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR GCA 90 bp CCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGCCCACGCGCTCCAGCTaGACCAGCGCCATGTGGGTC +
Preference number: 4 (lower is better)
Translates to: PPAPKAVQASTDPPLQGGPTRSS*TSAMWV
Trigger: GACCCACATGGCGCTGGTGCAGCTGGAGCGCGTGGG...CCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR GCA 90 bp GTGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGCCCTTCAGGCCCATGGTaGCCACGACTGTGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: VWQGLTCHLWGVASSRNRPSGPW*PRLCLG
Trigger: TCCGAGACACAGTCGTGGGCACCATGGGCCTGAAGG...GCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp CAGGGAGGGACCACGGAGGGCAGGTGTAACCCCTGGCCTGGAGCACAGCTCTCACCTTCAGGCCCATGGTaGCCACGACTGTGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: QGGTTEGRCNPWPGAQLSPSGPW*PRLCLG
Trigger: TCCGAGACACAGTCGTGGGCACCATGGGCCTGAAGG...TGAGAGCTGTGCTCCAGGCCAGGGGTTACACCTGCCCTCCGTGGTCCCTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp ACCCACGTCTCCCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACGGCTCGCAGCCCCCTTaGCTTAGCCACGGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: THVSLQPQRQCKPLLIPHGSQPP*LSHGAE
Trigger: CTCTGCACCGTGGCTAAGGCAAGGGGGCTGCGAGCC...GTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGGGAGACGTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp CTCGTCAACGTAGCCATGGATGCGGAGGTCAGCATGGCGGTCGTGCTTGGTGGGGGCTCGCAGCCCCCTTaGCTTAGCCACGGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: LVNVAMDAEVSMAVVLGGGSQPP*LSHGAE
Trigger: CTCTGCACCGTGGCTAAGGCAAGGGGGCTGCGAGCC...CCCACCAAGCACGACCGCCATGCTGACCTCCGCATCCATGGCTACGTTGACGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR GCA 90 bp GGCCCTGGGGACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCGGCTCGCAGCCCCCTTaGCTTAGCCACGGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: GPGDRGSSLLFKLETREGGSQPP*LSHGAE
Trigger: CTCTGCACCGTGGCTAAGGCAAGGGGGCTGCGAGCC...GCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTCCCCAGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp GCGCTTGGTAGCCAGCGGCAGGTTCCCGCTGGGCCGGATCTGCAGCGATGTACCTCGTGCTTGGTGGGCTaGAGGTTGACGATGACCAGG +
Preference number: 4 (lower is better)
Translates to: ALGSQRQVPAGPDLQRCTSCLVG*RLTMTR
Trigger: CCTGGTCATCGTCAACCTGCAGCCCACCAAGCACGA...GGTACATCGCTGCAGATCCGGCCCAGCGGGAACCTGCCGCTGGCTACCAAGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR GCA 90 bp TCACCTCTGGACAACACAGCAAGTCAGAGGCTGGGGTGTGGCAGGGGCTCACCTGTGGGTCTCCCCTCCTaGAGGGCCCATGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: SPLDNTASQRLGCGRGSPVGLPS*RAHGGG
Trigger: CCCTCCTCCATGGGCCCTGCAGGAGGGGAGACCCAC...AGGTGAGCCCCTGCCACACCCCAGCCTCTGACTTGCTGTGTTGTCCAGAGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp GACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGCCTCAGGCCTCATCGGCGAGTaGCAGGTCCCGGTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: DRGSSLLFKLETREGPASGLIGE*QVPVGQ
Trigger: CTGCCCGACCGGGACCTGGCACTCGCCGATGAGGCC...TGAGGCTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337491.7
ENST00000594279.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp TGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGCAGACCTCGCTCCTCCATaGTCCAGACTCCGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: CGRGSPVTSGVWLLPGTADLAPP*SRLRGD
Trigger: GTCCCCACGGAGTCTGGACCATGGAGGAGCGAGGTC...TGCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp GCGGGGATCTCCAGCCCCAGGTGCTTCATGAGCCGGGTCATGACCTCGTCAACGGACCTCGCTCCTCCATaGTCCAGACTCCGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: AGISSPRCFMSRVMTSSTDLAPP*SRLRGD
Trigger: GTCCCCACGGAGTCTGGACCATGGAGGAGCGAGGTC...CGTTGACGAGGTCATGACCCGGCTCATGAAGCACCTGGGGCTGGAGATCCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp GGGTGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGCGCGCTCTCAAAGGTaGTGTCGAACTTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: GCGRGSPVTSGVWLLPGTARSQR*CRTWGP
Trigger: TGGCCCCCAAGTTCGACACCACCTTTGAGAGCGCGC...GGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp GACCCACGTCTCCCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACCATGTGGGTCTGCGTaGGCCGCGCGCTCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: DPRLPPAPKAVQASTDPPPCGSA*AARSQR
Trigger: CCTTTGAGAGCGCGCGGCCCACGCAGACCCACATGG...TGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGGGAGACGTGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp CAGGGAGGGACCACGGAGGGCAGGTGTAACCCCTGGCCTGGAGCACAGCTCTCAAAGCCTGAGCGCACATaGAGCCCGTCCACGTTCTGG +
Preference number: 4 (lower is better)
Translates to: QGGTTEGRCNPWPGAQLSKPERT*SPSTFW
Trigger: CCAGAACGTGGACGGGCTCCATGTGCGCTCAGGCTT...TGAGAGCTGTGCTCCAGGCCAGGGGTTACACCTGCCCTCCGTGGTCCCTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp GGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAGATTCCTGCCAGTTTGTCCCTaGGGAAGCCTGAGCGCACAT +
Preference number: 4 (lower is better)
Translates to: GLLLGAGGDRAVDPGGRFLPVCP*GSLSAH
Trigger: ATGTGCGCTCAGGCTTCCCCAGGGACAAACTGGCAG...GAATCTCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp TGGCGGTCCTGCCGAGGGGCGGGACGGGTCAGGCGTGGGGGACAGAGGGTGCATACAAACATGTTCCCGTaGAGCTCTGCCAGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: WRSCRGAGRVRRGGQRVHTNMFP*SSASLS
Trigger: GGACAAACTGGCAGAGCTCCACGGGAACATGTTTGT...ATGCACCCTCTGTCCCCCACGCCTGACCCGTCCCGCCCCTCGGCAGGACCGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601571.1
CDS-3UTR CCA 90 bp TCACCTCTGGACAACACAGCAAGTCAGAGGCTGGGGTGTGGCAGGGGCTCACCTTGCAGAGCCGGCCCGTaGCCTTCAGGCCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: SPLDNTASQRLGCGRGSPCRAGP*PSGPWC
Trigger: GCACCATGGGCCTGAAGGCCACGGGCCGGCTCTGCA...AGGTGAGCCCCTGCCACACCCCAGCCTCTGACTTGCTGTGTTGTCCAGAGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp CTCGTCAACGTAGCCATGGATGCGGAGGTCAGCATGGCGGTCGTGCTTGGTGGGGCTCCCGTTTGGGGCTaGCGGGCTCTGAGCCGTTGT +
Preference number: 4 (lower is better)
Translates to: LVNVAMDAEVSMAVVLGGAPVWG*RALSRC
Trigger: ACAACGGCTCAGAGCCCGCCAGCCCCAAACGGGAGC...CCCACCAAGCACGACCGCCATGCTGACCTCCGCATCCATGGCTACGTTGACGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp GGCCCTGGGGACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCGCTCCCGTTTGGGGCTaGCGGGCTCTGAGCCGTTGT +
Preference number: 4 (lower is better)
Translates to: GPGDRGSSLLFKLETREGAPVWG*RALSRC
Trigger: ACAACGGCTCAGAGCCCGCCAGCCCCAAACGGGAGC...GCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTCCCCAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GACCCACGTCTCCCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACCTCCCCAAGCACCCTaGTCAGCTGGGGACCGCCTT +
Preference number: 4 (lower is better)
Translates to: DPRLPPAPKAVQASTDPPPPQAP*SAGDRL
Trigger: AAGGCGGTCCCCAGCTGACCAGGGTGCTTGGGGAGG...TGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGGGAGACGTGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GTGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGCGTCACCTCTGGGGTGTaGCTTCTTCCCGGAACCGCA +
Preference number: 4 (lower is better)
Translates to: VWQGLTCHLWGVASSRNRVTSGV*LLPGTA
Trigger: TGCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGAC...GCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GTCCACGTTCTGGCTGACCAGGAAGCGGAGGAGGCCCACGCGCTCCAGCTGCACCACTCCTGTTTAAGCTaGAGACCAGGGAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: VHVLADQEAEEAHALQLHHSCLS*RPGRAQ
Trigger: CTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTG...GTGCAGCTGGAGCGCGTGGGCCTCCTCCGCTTCCTGGTCAGCCAGAACGTGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp ACCCACGTCTCCCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACCTGGGCCGGATCTGCTaGCCTCATCGGCGAGTGCCA +
Preference number: 4 (lower is better)
Translates to: THVSLQPQRQCKPLLIPHLGRIC*PHRRVP
Trigger: TGGCACTCGCCGATGAGGCCAGCAGATCCGGCCCAG...GTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGGGAGACGTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594279.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGCCTCAGCGGCAGGTTCCCGCTaGGCCGGATCTGCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: DRGSSLLFKLETREGPASAAGSR*AGSAGL
Trigger: GAGGCCAGCAGATCCGGCCCAGCGGGAACCTGCCGC...TGAGGCTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594279.5
ENST00000601488.5
CDS-3UTR TCA 90 bp CCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTGCCAGAGGCAGTGCTaGTGCCGGCACCCGTGTGGA +
Preference number: 4 (lower is better)
Translates to: PPAPKAVQASTDPPLQGGCQRQC*CRHPCG
Trigger: TCCACACGGGTGCCGGCATCAGCACTGCCTCTGGCA...CCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000601488.5
CDS-3UTR TCA 90 bp CAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTCTCGTCCCTGGGGAAGCCTaGGCGCACATGGAGCCCGTC +
Preference number: 4 (lower is better)
Translates to: QPQRQCKPLLIPHFKVGLVPGEA*AHMEPV
Trigger: GACGGGCTCCATGTGCGCTCAGGCTTCCCCAGGGAC...GAGACCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR TCA 90 bp GATCTGCAGCGATGTACCCAGCGTGATGGACAGGTCGGCGTTCCTGCTGGCCTCGCGATGTACCCAGCGTaGTGGACAGGTCGGCGTTCC +
Preference number: 4 (lower is better)
Translates to: DLQRCTQRDGQVGVPAGLAMYPA*WTGRRS
Trigger: GGAACGCCGACCTGTCCATCACGCTGGGTACATCGC...GAGGCCAGCAGGAACGCCGACCTGTCCATCACGCTGGGTACATCGCTGCAGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600938.5
CDS-3UTR GCA 90 bp CCTGGGGACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCACCGCTGGGCCGGATCTaGAGCGATGTACCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: PGDRGSSLLFKLETREGPPLGRI*SDVPSV
Trigger: CACGCTGGGTACATCGCTGCAGATCCGGCCCAGCGG...TGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTCCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
CDS-3UTR GCA 90 bp CAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTCTCGGCTCTGAGCCGTTGTaGTGGGCGCAGGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QPQRQCKPLLIPHFKVGLGSEPL*WAQGSC
Trigger: GCAGGAGCCCTGCGCCCAGCACAACGGCTCAGAGCC...GAGACCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp GACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGCCTCAGTGGGTCTCCCCTCCTaGAGGGCCCATGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: DRGSSLLFKLETREGPASVGLPS*RAHGGG
Trigger: CCCTCCTCCATGGGCCCTGCAGGAGGGGAGACCCAC...TGAGGCTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp CAGCCCCAGGTGCTTCATGAGCCGGGTCATGACCTCGTCAACGTAGCCATGGATGTGGGTCTCCCCTCCTaGAGGGCCCATGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: QPQVLHEPGHDLVNVAMDVGLPS*RAHGGG
Trigger: CCCTCCTCCATGGGCCCTGCAGGAGGGGAGACCCAC...ATCCATGGCTACGTTGACGAGGTCATGACCCGGCTCATGAAGCACCTGGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR GCA 90 bp GTGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGCCAGCCCCAAAGGCAGTaGAAGCCTCTACTGATCCCC +
Preference number: 4 (lower is better)
Translates to: VWQGLTCHLWGVASSRNRQPQRQ*KPLLIP
Trigger: GGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTG...GCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp CAGGGAGGGACCACGGAGGGCAGGTGTAACCCCTGGCCTGGAGCACAGCTCTCAATGCCGGCACCCGTGTaGAACACCACACTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: QGGTTEGRCNPWPGAQLSMPAPV*NTTLED
Trigger: GTCTTCCAGTGTGGTGTTCCACACGGGTGCCGGCAT...TGAGAGCTGTGCTCCAGGCCAGGGGTTACACCTGCCCTCCGTGGTCCCTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GACCCACGTCTCCCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCAATGGTCCAGACTCCGTaGGGACCCCTGAAGTCGGGG +
Preference number: 4 (lower is better)
Translates to: DPRLPPAPKAVQASTDPPMVQTP*GPLKSG
Trigger: CCCCGACTTCAGGGGTCCCCACGGAGTCTGGACCAT...TGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGGGAGACGTGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
CDS-3UTR CCA 90 bp GGCCCTGGGGACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCAGCCCGTCCACGTTCTaGCTGACCAGGAAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: GPGDRGSSLLFKLETREGSPSTF*LTRKRR
Trigger: CCTCCGCTTCCTGGTCAGCCAGAACGTGGACGGGCT...GCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTCCCCAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp GCGCAGGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAACAAACATGTTCCCGTaGAGCTCTGCCAGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: AQGSCLGPAGIEPLIRVGTNMFP*SSASLS
Trigger: GGACAAACTGGCAGAGCTCCACGGGAACATGTTTGT...TCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GCGGGGATCTCCAGCCCCAGGTGCTTCATGAGCCGGGTCATGACCTCGTCAACGTGGCCTTCAGGCCCATaGTGCCCACGACTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: AGISSPRCFMSRVMTSSTWPSGP*CPRLCL
Trigger: GAGACACAGTCGTGGGCACCATGGGCCTGAAGGCCA...CGTTGACGAGGTCATGACCCGGCTCATGAAGCACCTGGGGCTGGAGATCCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000599365.5
ENST00000600938.5
ENST00000601571.1
CDS-3UTR CCA 90 bp GACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGCCTCAGCGGCAGGTTCCCGCTaGGCCGGATCTGCAGCGATG +
Preference number: 4 (lower is better)
Translates to: DRGSSLLFKLETREGPASAAGSR*AGSAAM
Trigger: CATCGCTGCAGATCCGGCCCAGCGGGAACCTGCCGC...TGAGGCTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp CAGCCCCAGGTGCTTCATGAGCCGGGTCATGACCTCGTCAACGTAGCCATGGATGCGGCAGGTTCCCGCTaGGCCGGATCTGCAGCGATG +
Preference number: 4 (lower is better)
Translates to: QPQVLHEPGHDLVNVAMDAAGSR*AGSAAM
Trigger: CATCGCTGCAGATCCGGCCCAGCGGGAACCTGCCGC...ATCCATGGCTACGTTGACGAGGTCATGACCCGGCTCATGAAGCACCTGGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000599365.5
ENST00000600938.5
ENST00000601571.1
CDS-3UTR CCA 90 bp GACCCACGTCTCCCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCAATGCGGAGGTCAGCATaGCGGTCGTGCTTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: DPRLPPAPKAVQASTDPPMRRSA*RSCLVG
Trigger: GCCCACCAAGCACGACCGCCATGCTGACCTCCGCAT...TGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGGGAGACGTGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp CCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGCCTCCCCAAGCACCCTaGTCAGCTGGGGACCGCCTT +
Preference number: 4 (lower is better)
Translates to: PPAPKAVQASTDPPLQGGPPQAP*SAGDRL
Trigger: AAGGCGGTCCCCAGCTGACCAGGGTGCTTGGGGAGG...CCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp TCACCTCTGGACAACACAGCAAGTCAGAGGCTGGGGTGTGGCAGGGGCTCACCTGGAGGAGGGGTAGGGTaGGCTGTAGGGGGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: SPLDNTASQRLGCGRGSPGGGVG*AVGGPE
Trigger: TTCTGGGCCCCCTACAGCCCACCCTACCCCTCCTCC...AGGTGAGCCCCTGCCACACCCCAGCCTCTGACTTGCTGTGTTGTCCAGAGGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp ACGGTGCAGAGCCGGCCCGTGGCCTTCAGGCCCATGGTGCCCACGACTGTGTCTACTTTTCCAGAAGCCTaGTGGACCCACGTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: TVQSRPVAFRPMVPTTVSTFPEA*WTHVSL
Trigger: GAGGGAGACGTGGGTCCACCAGGCTTCTGGAAAAGT...AGACACAGTCGTGGGCACCATGGGCCTGAAGGCCACGGGCCGGCTCTGCACCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR TCA 90 bp CAGCCCCAGGTGCTTCATGAGCCGGGTCATGACCTCGTCAACGTAGCCATGGATCGTCCACGTTCTGGCTaGCCAGGAAGCGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: QPQVLHEPGHDLVNVAMDRPRSG*PGSGGG
Trigger: GCCTCCTCCGCTTCCTGGTCAGCCAGAACGTGGACG...ATCCATGGCTACGTTGACGAGGTCATGACCCGGCTCATGAAGCACCTGGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR TCA 90 bp TCACCTCTGGACAACACAGCAAGTCAGAGGCTGGGGTGTGGCAGGGGCTCACCTGCGATGTACCCAGCGTaGTGGACAGGTCGGCGTTCC +
Preference number: 4 (lower is better)
Translates to: SPLDNTASQRLGCGRGSPAMYPA*WTGRRS
Trigger: GGAACGCCGACCTGTCCATCACGCTGGGTACATCGC...AGGTGAGCCCCTGCCACACCCCAGCCTCTGACTTGCTGTGTTGTCCAGAGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
CDS-3UTR TCA 90 bp CCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTCTCCCCGCGATGTACCCAGCGTaGTGGACAGGTCGGCGTTCC +
Preference number: 4 (lower is better)
Translates to: PQRQCKPLLIPHFKVGLPAMYPA*WTGRRS
Trigger: GGAACGCCGACCTGTCCATCACGCTGGGTACATCGC...GGGGAGACCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
CDS-3UTR TCA 90 bp TCACCTCTGGACAACACAGCAAGTCAGAGGCTGGGGTGTGGCAGGGGCTCACCTCAGCTCTCAGAGCCCTaGGGCTCCCGGGGACAGAAA +
Preference number: 4 (lower is better)
Translates to: SPLDNTASQRLGCGRGSPQLSEP*GSRGQK
Trigger: TTTCTGTCCCCGGGAGCCTCAGGGCTCTGAGAGCTG...AGGTGAGCCCCTGCCACACCCCAGCCTCTGACTTGCTGTGTTGTCCAGAGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp TGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGCAACCACACTGGAAGACTaGCAGACCAGCCTCGCCAGT +
Preference number: 4 (lower is better)
Translates to: CGRGSPVTSGVWLLPGTATTLED*QTSLAS
Trigger: ACTGGCGAGGCTGGTCTGGCAGTCTTCCAGTGTGGT...TGCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000601488.5
CDS-3UTR GCA 90 bp GGCCCTGGGGACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCTTCAGGCCCATGGTaGCCACGACTGTGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: GPGDRGSSLLFKLETREGPSGPW*PRLCLG
Trigger: TCCGAGACACAGTCGTGGGCACCATGGGCCTGAAGG...GCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTCCCCAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp GAGCCGGGTCATGACCTCGTCAACGTAGCCATGGATGCGGAGGTCAGCATGGCGCCTTCAGGCCCATGGTaGCCACGACTGTGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: EPGHDLVNVAMDAEVSMAPSGPW*PRLCLG
Trigger: TCCGAGACACAGTCGTGGGCACCATGGGCCTGAAGG...CGCCATGCTGACCTCCGCATCCATGGCTACGTTGACGAGGTCATGACCCGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000599365.5
ENST00000600938.5
ENST00000601571.1
CDS-3UTR GCA 90 bp CAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTCTCGGCTCGCAGCCCCCTTaGCTTAGCCACGGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: QPQRQCKPLLIPHFKVGLGSQPP*LSHGAE
Trigger: CTCTGCACCGTGGCTAAGGCAAGGGGGCTGCGAGCC...GAGACCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp GTGCTTCATGAGCCGGGTCATGACCTCGTCAACGTAGCCATGGATGCGGAGGTCCCGCTGGGCCGGATCTaGAGCGATGTACCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: VLHEPGHDLVNVAMDAEVPLGRI*SDVPSV
Trigger: CACGCTGGGTACATCGCTGCAGATCCGGCCCAGCGG...GACCTCCGCATCCATGGCTACGTTGACGAGGTCATGACCCGGCTCATGAAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000599365.5
ENST00000600938.5
ENST00000601571.1
CDS-3UTR GCA 90 bp TGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGCAATCTCCAGCCCCAGGTaGTTCATGAGCCGGGTCATG +
Preference number: 4 (lower is better)
Translates to: CGRGSPVTSGVWLLPGTAISSPR*FMSRVM
Trigger: CATGACCCGGCTCATGAAGCACCTGGGGCTGGAGAT...TGCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp GGGTGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCTCGAAGATCTCCCTTTaGGCCTGTCGTCCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GCGRGSPVTSGVWLLPGTSKISL*ACRPLF
Trigger: GAAGAGGGGACGACAGGCGCAAAGGGAGATCTTCGA...GGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000594279.5
CDS-3UTR GCA 90 bp GGGTGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGTTCCCGTGGAGCTCTaGCAGTTTGTCCCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: GCGRGSPVTSGVWLLPGTVPVEL*QFVPEV
Trigger: GACTTCAGGGACAAACTGGCAGAGCTCCACGGGAAC...GGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601488.5
CDS-3UTR CCA 90 bp CCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTCTCCCCGACCTCGCTCCTCCATaGTCCAGACTCCGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: PQRQCKPLLIPHFKVGLPDLAPP*SRLRGD
Trigger: GTCCCCACGGAGTCTGGACCATGGAGGAGCGAGGTC...GGGGAGACCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp ACCCACGTCTCCCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACAGGTGGTGTCGAACTTaGGGGCCAGACCTCGCTCCT +
Preference number: 4 (lower is better)
Translates to: THVSLQPQRQCKPLLIPHRWCRT*GPDLAP
Trigger: AGGAGCGAGGTCTGGCCCCCAAGTTCGACACCACCT...GTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGGGAGACGTGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp CATGACCTCGTCAACGTAGCCATGGATGCGGAGGTCAGCATGGCGGTCGTGCTTCCATGTGGGTCTGCGTaGGCCGCGCGCTCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: HDLVNVAMDAEVSMAVVLPCGSA*AARSQR
Trigger: CCTTTGAGAGCGCGCGGCCCACGCAGACCCACATGG...AAGCACGACCGCCATGCTGACCTCCGCATCCATGGCTACGTTGACGAGGTCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp CCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTCTCCCCAGCCCGTCCACGTTCTaGCTGACCAGGAAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: PQRQCKPLLIPHFKVGLPSPSTF*LTRKRR
Trigger: CCTCCGCTTCCTGGTCAGCCAGAACGTGGACGGGCT...GGGGAGACCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp GACCCACGTCTCCCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCATGGCCTTCAGGCCCATaGTGCCCACGACTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: DPRLPPAPKAVQASTDPPWPSGP*CPRLCL
Trigger: GAGACACAGTCGTGGGCACCATGGGCCTGAAGGCCA...TGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGGGAGACGTGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp CCTGGGGACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAATGCGGAGGTCAGCATaGCGGTCGTGCTTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: PGDRGSSLLFKLETREGPMRRSA*RSCLVG
Trigger: GCCCACCAAGCACGACCGCCATGCTGACCTCCGCAT...TGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTCCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp CCCCAGGTGCTTCATGAGCCGGGTCATGACCTCGTCAACGTAGCCATGGATGCGTCTGAGCCGTTGTGCTaGGCGCAGGGCTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: PQVLHEPGHDLVNVAMDASEPLC*AQGSCL
Trigger: CAAGCAGGAGCCCTGCGCCCAGCACAACGGCTCAGA...CGCATCCATGGCTACGTTGACGAGGTCATGACCCGGCTCATGAAGCACCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp GACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGCCTCAGCTCCCGTTTGGGGCTaGCGGGCTCTGAGCCGTTGT +
Preference number: 4 (lower is better)
Translates to: DRGSSLLFKLETREGPASAPVWG*RALSRC
Trigger: ACAACGGCTCAGAGCCCGCCAGCCCCAAACGGGAGC...TGAGGCTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGCCTCACCTCCCCAAGCACCCTaGTCAGCTGGGGACCGCCTT +
Preference number: 4 (lower is better)
Translates to: DRGSSLLFKLETREGPASPPQAP*SAGDRL
Trigger: AAGGCGGTCCCCAGCTGACCAGGGTGCTTGGGGAGG...TGAGGCTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp CTCGTCAACGTAGCCATGGATGCGGAGGTCAGCATGGCGGTCGTGCTTGGTGGGGGCAGGTGTAACCCCTaGCCTGGAGCACAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: LVNVAMDAEVSMAVVLGGGRCNP*PGAQLS
Trigger: TGAGAGCTGTGCTCCAGGCCAGGGGTTACACCTGCC...CCCACCAAGCACGACCGCCATGCTGACCTCCGCATCCATGGCTACGTTGACGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp GACCCACGTCTCCCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCAGTCACCTCTGGGGTGTaGCTTCTTCCCGGAACCGCA +
Preference number: 4 (lower is better)
Translates to: DPRLPPAPKAVQASTDPPVTSGV*LLPGTA
Trigger: TGCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGAC...TGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGGGAGACGTGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp CAGCCCCAGGTGCTTCATGAGCCGGGTCATGACCTCGTCAACGTAGCCATGGATGGAGGAGGGGTAGGGTaGGCTGTAGGGGGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: QPQVLHEPGHDLVNVAMDGGGVG*AVGGPE
Trigger: TTCTGGGCCCCCTACAGCCCACCCTACCCCTCCTCC...ATCCATGGCTACGTTGACGAGGTCATGACCCGGCTCATGAAGCACCTGGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp GTGCTTCATGAGCCGGGTCATGACCTCGTCAACGTAGCCATGGATGCGGAGGTCGGAGGAGGGGTAGGGTaGGCTGTAGGGGGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: VLHEPGHDLVNVAMDAEVGGGVG*AVGGPE
Trigger: TTCTGGGCCCCCTACAGCCCACCCTACCCCTCCTCC...GACCTCCGCATCCATGGCTACGTTGACGAGGTCATGACCCGGCTCATGAAGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp CCCCAGGTGCTTCATGAGCCGGGTCATGACCTCGTCAACGTAGCCATGGATGCGTCCCCCACTTCAAGGTaGGTCTCCCCTCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PQVLHEPGHDLVNVAMDASPTSR*VSPPAG
Trigger: CCCTGCAGGAGGGGAGACCCACCTTGAAGTGGGGGA...CGCATCCATGGCTACGTTGACGAGGTCATGACCCGGCTCATGAAGCACCTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp GGGTGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCACTTTTCCAGAAGCCTaGTGGACCCACGTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: GCGRGSPVTSGVWLLPGTTFPEA*WTHVSL
Trigger: GAGGGAGACGTGGGTCCACCAGGCTTCTGGAAAAGT...GGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp CAGGGAGGGACCACGGAGGGCAGGTGTAACCCCTGGCCTGGAGCACAGCTCTCAACTTTTCCAGAAGCCTaGTGGACCCACGTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: QGGTTEGRCNPWPGAQLSTFPEA*WTHVSL
Trigger: GAGGGAGACGTGGGTCCACCAGGCTTCTGGAAAAGT...TGAGAGCTGTGCTCCAGGCCAGGGGTTACACCTGCCCTCCGTGGTCCCTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GTGCTTCATGAGCCGGGTCATGACCTCGTCAACGTAGCCATGGATGCGGAGGTCGGTGCATGGTGGCCCTaGGCAGGGGTAGGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: VLHEPGHDLVNVAMDAEVGAWWP*AGVGSD
Trigger: GTCTGAGCCTACCCCTGCCCAGGGCCACCATGCACC...GACCTCCGCATCCATGGCTACGTTGACGAGGTCATGACCCGGCTCATGAAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601571.1
CDS-3UTR TCA 90 bp TGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGCAAGTGCAAGCCTCTACTaGTCCCCCACTTCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: CGRGSPVTSGVWLLPGTASASLY*SPTSRW
Trigger: CCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACT...TGCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp GACCCACGTCTCCCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCAGTTCCCGTGGAGCTCTaGCAGTTTGTCCCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: DPRLPPAPKAVQASTDPPVPVEL*QFVPGE
Trigger: TTCCCCAGGGACAAACTGGCAGAGCTCCACGGGAAC...TGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGGGAGACGTGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR GCA 90 bp TCACCTCTGGACAACACAGCAAGTCAGAGGCTGGGGTGTGGCAGGGGCTCACCTCCTTCAGGCCCATGGTaGCCACGACTGTGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: SPLDNTASQRLGCGRGSPPSGPW*PRLCLG
Trigger: TCCGAGACACAGTCGTGGGCACCATGGGCCTGAAGG...AGGTGAGCCCCTGCCACACCCCAGCCTCTGACTTGCTGTGTTGTCCAGAGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp TGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGCATGTGGAACACCACACTaGAAGACTGCCAGACCAGCC +
Preference number: 4 (lower is better)
Translates to: CGRGSPVTSGVWLLPGTACGTPH*KTARPA
Trigger: GGCTGGTCTGGCAGTCTTCCAGTGTGGTGTTCCACA...TGCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000601488.5
CDS-3UTR CCA 90 bp ACCCACGTCTCCCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACATGCCGGCACCCGTGTaGAACACCACACTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: THVSLQPQRQCKPLLIPHMPAPV*NTTLED
Trigger: GTCTTCCAGTGTGGTGTTCCACACGGGTGCCGGCAT...GTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGGGAGACGTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000601488.5
CDS-3UTR CCA 90 bp ACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGCCTCACGACCTCGCTCCTCCATaGTCCAGACTCCGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: TEGVHSCLSWRPGRAQPHDLAPP*SRLRGD
Trigger: GTCCCCACGGAGTCTGGACCATGGAGGAGCGAGGTC...GTGAGGCTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp CCTGGGGACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAAGGTGGTGTCGAACTTaGGGGCCAGACCTCGCTCCT +
Preference number: 4 (lower is better)
Translates to: PGDRGSSLLFKLETREGPRWCRT*GPDLAP
Trigger: AGGAGCGAGGTCTGGCCCCCAAGTTCGACACCACCT...TGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp TCACCTCTGGACAACACAGCAAGTCAGAGGCTGGGGTGTGGCAGGGGCTCACCTGCGCGCTCTCAAAGGTaGTGTCGAACTTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: SPLDNTASQRLGCGRGSPARSQR*CRTWGP
Trigger: TGGCCCCCAAGTTCGACACCACCTTTGAGAGCGCGC...AGGTGAGCCCCTGCCACACCCCAGCCTCTGACTTGCTGTGTTGTCCAGAGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp CCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTCTCCCCAAGCCTGAGCGCACATaGAGCCCGTCCACGTTCTGG +
Preference number: 4 (lower is better)
Translates to: PQRQCKPLLIPHFKVGLPKPERT*SPSTFW
Trigger: CCAGAACGTGGACGGGCTCCATGTGCGCTCAGGCTT...GGGGAGACCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp GCGCTTGGTAGCCAGCGGCAGGTTCCCGCTGGGCCGGATCTGCAGCGATGTACCACAAACATGTTCCCGTaGAGCTCTGCCAGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: ALGSQRQVPAGPDLQRCTTNMFP*SSASLS
Trigger: GGACAAACTGGCAGAGCTCCACGGGAACATGTTTGT...GGTACATCGCTGCAGATCCGGCCCAGCGGGAACCTGCCGCTGGCTACCAAGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp CAGGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAGATACAAACATGTTCCCGTaGAGCTCTGCCAGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: QGSCLGPAGIEPLIRVGDTNMFP*SSASLS
Trigger: GGACAAACTGGCAGAGCTCCACGGGAACATGTTTGT...ATCTCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp CCTGGGGACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCATGGCCTTCAGGCCCATaGTGCCCACGACTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: PGDRGSSLLFKLETREGPWPSGP*CPRLCL
Trigger: GAGACACAGTCGTGGGCACCATGGGCCTGAAGGCCA...TGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp CCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTGGCCTTCAGGCCCATaGTGCCCACGACTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: PPAPKAVQASTDPPLQGGWPSGP*CPRLCL
Trigger: GAGACACAGTCGTGGGCACCATGGGCCTGAAGGCCA...CCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp CAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTCTCATGCGGAGGTCAGCATaGCGGTCGTGCTTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: QPQRQCKPLLIPHFKVGLMRRSA*RSCLVG
Trigger: GCCCACCAAGCACGACCGCCATGCTGACCTCCGCAT...GAGACCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGCCTCATCTGAGCCGTTGTGCTaGGCGCAGGGCTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: DRGSSLLFKLETREGPASSEPLC*AQGSCL
Trigger: CAAGCAGGAGCCCTGCGCCCAGCACAACGGCTCAGA...TGAGGCTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GTGCTTCATGAGCCGGGTCATGACCTCGTCAACGTAGCCATGGATGCGGAGGTCAGCTGGGGACCGCCTTaGCCTTCACCCTTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: VLHEPGHDLVNVAMDAEVSWGPP*PSPFWG
Trigger: CCCCCAAAAGGGTGAAGGCCAAGGCGGTCCCCAGCT...GACCTCCGCATCCATGGCTACGTTGACGAGGTCATGACCCGGCTCATGAAGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp CCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGGGCAGGTGTAACCCCTaGCCTGGAGCACAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: PPAPKAVQASTDPPLQGGGRCNP*PGAQLS
Trigger: TGAGAGCTGTGCTCCAGGCCAGGGGTTACACCTGCC...CCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp TCACCTCTGGACAACACAGCAAGTCAGAGGCTGGGGTGTGGCAGGGGCTCACCTGGCAGGTGTAACCCCTaGCCTGGAGCACAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: SPLDNTASQRLGCGRGSPGRCNP*PGAQLS
Trigger: TGAGAGCTGTGCTCCAGGCCAGGGGTTACACCTGCC...AGGTGAGCCCCTGCCACACCCCAGCCTCTGACTTGCTGTGTTGTCCAGAGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp CCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTCTCCCCGGCAGGTGTAACCCCTaGCCTGGAGCACAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: PQRQCKPLLIPHFKVGLPGRCNP*PGAQLS
Trigger: TGAGAGCTGTGCTCCAGGCCAGGGGTTACACCTGCC...GGGGAGACCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GGCCCTGGGGACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCACTCCTGTTTAAGCTaGAGACCAGGGAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GPGDRGSSLLFKLETREGHSCLS*RPGRAQ
Trigger: CTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTG...GCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTCCCCAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGCCTCATCCCCCACTTCAAGGTaGGTCTCCCCTCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: DRGSSLLFKLETREGPASSPTSR*VSPPAG
Trigger: CCCTGCAGGAGGGGAGACCCACCTTGAAGTGGGGGA...TGAGGCTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp TGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGCAACTTTTCCAGAAGCCTaGTGGACCCACGTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: CGRGSPVTSGVWLLPGTATFPEA*WTHVSL
Trigger: GAGGGAGACGTGGGTCCACCAGGCTTCTGGAAAAGT...TGCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR TCA 90 bp GGCCCTGGGGACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCAGTGCAAGCCTCTACTaGTCCCCCACTTCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: GPGDRGSSLLFKLETREGSASLY*SPTSRW
Trigger: CCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACT...GCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTCCCCAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR TCA 90 bp ACCCACGTCTCCCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACAGTGCAAGCCTCTACTaGTCCCCCACTTCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: THVSLQPQRQCKPLLIPHSASLY*SPTSRW
Trigger: CCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACT...GTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGGGAGACGTGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR TCA 90 bp TGGCAGCGCCCTCTCCAGCACACGGGGGCCGTCCCAGGCGGGGATCTCCAGCCCTTGTTTTTATTGCATTaGGGACTTTTCCAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: WQRPLQHTGAVPGGDLQPLFLLH*GLFQKP
Trigger: AGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAA...GGGCTGGAGATCCCCGCCTGGGACGGCCCCCGTGTGCTGGAGAGGGCGCTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp CCTGGGGACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGTTCCCGTGGAGCTCTaGCAGTTTGTCCCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: PGDRGSSLLFKLETREGPVPVEL*QFVPGE
Trigger: TTCCCCAGGGACAAACTGGCAGAGCTCCACGGGAAC...TGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR GCA 90 bp AGCACAGCTCTCAGAGCCCTGAGGCTCCCGGGGACAGAAACAAGTAACAAAGTGGGCTCGCAGCCCCCTTaGCTTAGCCACGGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: STALRALRLPGTETSNKVGSQPP*LSHGAE
Trigger: CTCTGCACCGTGGCTAAGGCAAGGGGGCTGCGAGCC...CACTTTGTTACTTGTTTCTGTCCCCGGGAGCCTCAGGGCTCTGAGAGCTGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp CCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTCTCCCCTCGTGCTTGGTGGGCTaGAGGTTGACGATGACCAGG +
Preference number: 4 (lower is better)
Translates to: PQRQCKPLLIPHFKVGLPSCLVG*RLTMTR
Trigger: CCTGGTCATCGTCAACCTGCAGCCCACCAAGCACGA...GGGGAGACCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp CCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTCTCCCCCAACGTAGCCATGGATaGGGAGGTCAGCATGGCGGT +
Preference number: 4 (lower is better)
Translates to: PQRQCKPLLIPHFKVGLPQRSHG*GGQHGG
Trigger: ACCGCCATGCTGACCTCCGCATCCATGGCTACGTTG...GGGGAGACCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp GGCCCATGGTGCCCACGACTGTGTCTCGGACGTACTGCGTCTTACACTTGGCACCAACGTAGCCATGGATaGGGAGGTCAGCATGGCGGT +
Preference number: 4 (lower is better)
Translates to: GPWCPRLCLGRTASYTWHQRSHG*GGQHGG
Trigger: ACCGCCATGCTGACCTCCGCATCCATGGCTACGTTG...GTGCCAAGTGTAAGACGCAGTACGTCCGAGACACAGTCGTGGGCACCATGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR GCA 90 bp CCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGATCTCCAGCCCCAGGTaGTTCATGAGCCGGGTCATG +
Preference number: 4 (lower is better)
Translates to: PPAPKAVQASTDPPLQGGISSPR*FMSRVM
Trigger: CATGACCCGGCTCATGAAGCACCTGGGGCTGGAGAT...CCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp CCTGGGGACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAATCTCCAGCCCCAGGTaGTTCATGAGCCGGGTCATG +
Preference number: 4 (lower is better)
Translates to: PGDRGSSLLFKLETREGPISSPR*FMSRVM
Trigger: CATGACCCGGCTCATGAAGCACCTGGGGCTGGAGAT...TGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp CCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTCTCCCCATCTCCAGCCCCAGGTaGTTCATGAGCCGGGTCATG +
Preference number: 4 (lower is better)
Translates to: PQRQCKPLLIPHFKVGLPISSPR*FMSRVM
Trigger: CATGACCCGGCTCATGAAGCACCTGGGGCTGGAGAT...GGGGAGACCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp TCACCTCTGGACAACACAGCAAGTCAGAGGCTGGGGTGTGGCAGGGGCTCACCTCAGCCCCAAAGGCAGTaGAAGCCTCTACTGATCCCC +
Preference number: 4 (lower is better)
Translates to: SPLDNTASQRLGCGRGSPQPQRQ*KPLLIP
Trigger: GGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTG...AGGTGAGCCCCTGCCACACCCCAGCCTCTGACTTGCTGTGTTGTCCAGAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp CCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGCAGCCCCAAAGGCAGTaGAAGCCTCTACTGATCCCC +
Preference number: 4 (lower is better)
Translates to: PPAPKAVQASTDPPLQGGQPQRQ*KPLLIP
Trigger: GGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTG...CCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp CAGCCCCAGGTGCTTCATGAGCCGGGTCATGACCTCGTCAACGTAGCCATGGATAGGTGGTGTCGAACTTaGGGGCCAGACCTCGCTCCT +
Preference number: 4 (lower is better)
Translates to: QPQVLHEPGHDLVNVAMDRWCRT*GPDLAP
Trigger: AGGAGCGAGGTCTGGCCCCCAAGTTCGACACCACCT...ATCCATGGCTACGTTGACGAGGTCATGACCCGGCTCATGAAGCACCTGGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp GACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGCCTCAAAGCCTGAGCGCACATaGAGCCCGTCCACGTTCTGG +
Preference number: 4 (lower is better)
Translates to: DRGSSLLFKLETREGPASKPERT*SPSTFW
Trigger: CCAGAACGTGGACGGGCTCCATGTGCGCTCAGGCTT...TGAGGCTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp ACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGCCTCACAAGCCTGAGCGCACATaGAGCCCGTCCACGTTCTGG +
Preference number: 4 (lower is better)
Translates to: TEGVHSCLSWRPGRAQPHKPERT*SPSTFW
Trigger: CCAGAACGTGGACGGGCTCCATGTGCGCTCAGGCTT...GTGAGGCTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp CCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGCTGCCAGTTTGTCCCTaGGGAAGCCTGAGCGCACAT +
Preference number: 4 (lower is better)
Translates to: PPAPKAVQASTDPPLQGGLPVCP*GSLSAH
Trigger: ATGTGCGCTCAGGCTTCCCCAGGGACAAACTGGCAG...CCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp GGGTGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCACAAACATGTTCCCGTaGAGCTCTGCCAGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: GCGRGSPVTSGVWLLPGTTNMFP*SSASLS
Trigger: GGACAAACTGGCAGAGCTCCACGGGAACATGTTTGT...GGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGCCTCATGGCCTTCAGGCCCATaGTGCCCACGACTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: DRGSSLLFKLETREGPASWPSGP*CPRLCL
Trigger: GAGACACAGTCGTGGGCACCATGGGCCTGAAGGCCA...TGAGGCTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp ACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGCCTCACGGCAGGTGTAACCCCTaGCCTGGAGCACAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: TEGVHSCLSWRPGRAQPHGRCNP*PGAQLS
Trigger: TGAGAGCTGTGCTCCAGGCCAGGGGTTACACCTGCC...GTGAGGCTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp CAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTCTCGTCACCTCTGGGGTGTaGCTTCTTCCCGGAACCGCA +
Preference number: 4 (lower is better)
Translates to: QPQRQCKPLLIPHFKVGLVTSGV*LLPGTA
Trigger: TGCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGAC...GAGACCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp TCACCTCTGGACAACACAGCAAGTCAGAGGCTGGGGTGTGGCAGGGGCTCACCTCACTCCTGTTTAAGCTaGAGACCAGGGAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: SPLDNTASQRLGCGRGSPHSCLS*RPGRAQ
Trigger: CTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTG...AGGTGAGCCCCTGCCACACCCCAGCCTCTGACTTGCTGTGTTGTCCAGAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp ACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGCCTCACCCTCCCAGTCTAGGATaGTGTCCCTCAGCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: TEGVHSCLSWRPGRAQPHPPSLG*CPSALP
Trigger: GGGGAGAGCTGAGGGACACCATCCTAGACTGGGAGG...GTGAGGCTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337491.7
ENST00000594279.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp CATGACCTCGTCAACGTAGCCATGGATGCGGAGGTCAGCATGGCGGTCGTGCTTCCTCCCAGTCTAGGATaGTGTCCCTCAGCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: HDLVNVAMDAEVSMAVVLPPSLG*CPSALP
Trigger: GGGGAGAGCTGAGGGACACCATCCTAGACTGGGAGG...AAGCACGACCGCCATGCTGACCTCCGCATCCATGGCTACGTTGACGAGGTCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600938.5
CDS-3UTR CCA 90 bp AGCACAGCTCTCAGAGCCCTGAGGCTCCCGGGGACAGAAACAAGTAACAAAGTGCTGGGCCGGATCTGCTaGCCTCATCGGCGAGTGCCA +
Preference number: 4 (lower is better)
Translates to: STALRALRLPGTETSNKVLGRIC*PHRRVP
Trigger: TGGCACTCGCCGATGAGGCCAGCAGATCCGGCCCAG...CACTTTGTTACTTGTTTCTGTCCCCGGGAGCCTCAGGGCTCTGAGAGCTGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594279.5
ENST00000601488.5
CDS-3UTR TCA 90 bp CCTCCCCGGCGCTTGGTAGCCAGCGGCAGGTTCCCGCTGGGCCGGATCTGCAGCTTGTTTTTATTGCATTaGGGACTTTTCCAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: PPRRLVASGRFPLGRICSLFLLH*GLFQKP
Trigger: AGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAA...GCTGCAGATCCGGCCCAGCGGGAACCTGCCGCTGGCTACCAAGCGCCGGGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR GCA 90 bp CAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTCTCACCACACTGGAAGACTaGCAGACCAGCCTCGCCAGT +
Preference number: 4 (lower is better)
Translates to: QPQRQCKPLLIPHFKVGLTTLED*QTSLAS
Trigger: ACTGGCGAGGCTGGTCTGGCAGTCTTCCAGTGTGGT...GAGACCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000601488.5
CDS-3UTR GCA 90 bp CAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTCTCGTTCCCGTGGAGCTCTaGCAGTTTGTCCCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: QPQRQCKPLLIPHFKVGLVPVEL*QFVPGE
Trigger: TTCCCCAGGGACAAACTGGCAGAGCTCCACGGGAAC...GAGACCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR GCA 90 bp GACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGCCTCATCGTGCTTGGTGGGCTaGAGGTTGACGATGACCAGG +
Preference number: 4 (lower is better)
Translates to: DRGSSLLFKLETREGPASSCLVG*RLTMTR
Trigger: CCTGGTCATCGTCAACCTGCAGCCCACCAAGCACGA...TGAGGCTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp ACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGCCTCACTCGTGCTTGGTGGGCTaGAGGTTGACGATGACCAGG +
Preference number: 4 (lower is better)
Translates to: TEGVHSCLSWRPGRAQPHSCLVG*RLTMTR
Trigger: CCTGGTCATCGTCAACCTGCAGCCCACCAAGCACGA...GTGAGGCTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp ACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGCCTCACCAACGTAGCCATGGATaGGGAGGTCAGCATGGCGGT +
Preference number: 4 (lower is better)
Translates to: TEGVHSCLSWRPGRAQPHQRSHG*GGQHGG
Trigger: ACCGCCATGCTGACCTCCGCATCCATGGCTACGTTG...GTGAGGCTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp CCCCAGGTGCTTCATGAGCCGGGTCATGACCTCGTCAACGTAGCCATGGATGCGGTTCCCGTGGAGCTCTaGCAGTTTGTCCCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: PQVLHEPGHDLVNVAMDAVPVEL*QFVPEV
Trigger: GACTTCAGGGACAAACTGGCAGAGCTCCACGGGAAC...CGCATCCATGGCTACGTTGACGAGGTCATGACCCGGCTCATGAAGCACCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601571.1
CDS-3UTR GCA 90 bp CAGCCCCAGGTGCTTCATGAGCCGGGTCATGACCTCGTCAACGTAGCCATGGATACGTGCTTGGTGGGCTaGAGGTTGACGATGACCAGG +
Preference number: 4 (lower is better)
Translates to: QPQVLHEPGHDLVNVAMDTCLVG*RLTMTR
Trigger: CCTGGTCATCGTCAACCTGCAGCCCACCAAGCACGT...ATCCATGGCTACGTTGACGAGGTCATGACCCGGCTCATGAAGCACCTGGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601571.1
CDS-3UTR CCA 90 bp CCTGGGGACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCATGTGGAACACCACACTaGAAGACTGCCAGACCAGCC +
Preference number: 4 (lower is better)
Translates to: PGDRGSSLLFKLETREGPCGTPH*KTARPA
Trigger: GGCTGGTCTGGCAGTCTTCCAGTGTGGTGTTCCACA...TGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000601488.5
CDS-3UTR CCA 90 bp AGCACAGCTCTCAGAGCCCTGAGGCTCCCGGGGACAGAAACAAGTAACAAAGTGATGCGGAGGTCAGCATaGCGGTCGTGCTTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: STALRALRLPGTETSNKVMRRSA*RSCLVG
Trigger: GCCCACCAAGCACGACCGCCATGCTGACCTCCGCAT...CACTTTGTTACTTGTTTCTGTCCCCGGGAGCCTCAGGGCTCTGAGAGCTGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp AGCACAGCTCTCAGAGCCCTGAGGCTCCCGGGGACAGAAACAAGTAACAAAGTGTCCCCCACTTCAAGGTaGGTCTCCCCTCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: STALRALRLPGTETSNKVSPTSR*VSPPAG
Trigger: CCCTGCAGGAGGGGAGACCCACCTTGAAGTGGGGGA...CACTTTGTTACTTGTTTCTGTCCCCGGGAGCCTCAGGGCTCTGAGAGCTGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGCCTCATGTGGAACACCACACTaGAAGACTGCCAGACCAGCC +
Preference number: 4 (lower is better)
Translates to: DRGSSLLFKLETREGPASCGTPH*KTARPA
Trigger: GGCTGGTCTGGCAGTCTTCCAGTGTGGTGTTCCACA...TGAGGCTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAGATTCACTGCGTCTTACACTTaGCACATTCTTCCACAAACA +
Preference number: 4 (lower is better)
Translates to: GLLLGAGGDRAVDPGGRFTASYT*HILPQT
Trigger: TGTTTGTGGAAGAATGTGCCAAGTGTAAGACGCAGT...GAATCTCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GCCAGCGGCAGGTTCCCGCTGGGCCGGATCTGCAGCGATGTACCCAGCGTGATGACTGCGTCTTACACTTaGCACATTCTTCCACAAACA +
Preference number: 4 (lower is better)
Translates to: ASGRFPLGRICSDVPSVMTASYT*HILPQT
Trigger: TGTTTGTGGAAGAATGTGCCAAGTGTAAGACGCAGT...CATCACGCTGGGTACATCGCTGCAGATCCGGCCCAGCGGGAACCTGCCGCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp CAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTCTCACTTTTCCAGAAGCCTaGTGGACCCACGTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: QPQRQCKPLLIPHFKVGLTFPEA*WTHVSL
Trigger: GAGGGAGACGTGGGTCCACCAGGCTTCTGGAAAAGT...GAGACCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp ACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGCCTCACACTTTTCCAGAAGCCTaGTGGACCCACGTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: TEGVHSCLSWRPGRAQPHTFPEA*WTHVSL
Trigger: GAGGGAGACGTGGGTCCACCAGGCTTCTGGAAAAGT...GTGAGGCTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GGACGTACTGCGTCTTACACTTGGCACATTCTTCCACAAACATGTTCCCGTGGAATGGTCCAGACTCCGTaGGGACCCCTCCGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: GRTASYTWHILPQTCSRGMVQTP*GPLREA
Trigger: GGCCTCCCGGAGGGGTCCCCACGGAGTCTGGACCAT...TCCACGGGAACATGTTTGTGGAAGAATGTGCCAAGTGTAAGACGCAGTACGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR TCA 90 bp GCCCAGGGAGGGACCACGGAGGGCAGGTGTAACCCCTGGCCTGGAGCACAGCTCTTGTTTTTATTGCATTaGGGACTTTTCCAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: AQGGTTEGRCNPWPGAQLLFLLH*GLFQKP
Trigger: AGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAA...GAGCTGTGCTCCAGGCCAGGGGTTACACCTGCCCTCCGTGGTCCCTCCCTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp AGCACAGCTCTCAGAGCCCTGAGGCTCCCGGGGACAGAAACAAGTAACAAAGTGACCACACTGGAAGACTaGCAGACCAGCCTCGCCAGT +
Preference number: 4 (lower is better)
Translates to: STALRALRLPGTETSNKVTTLED*QTSLAS
Trigger: ACTGGCGAGGCTGGTCTGGCAGTCTTCCAGTGTGGT...CACTTTGTTACTTGTTTCTGTCCCCGGGAGCCTCAGGGCTCTGAGAGCTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000601488.5
CDS-3UTR GCA 90 bp AGCACAGCTCTCAGAGCCCTGAGGCTCCCGGGGACAGAAACAAGTAACAAAGTGGTTCCCGTGGAGCTCTaGCAGTTTGTCCCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: STALRALRLPGTETSNKVVPVEL*QFVPGE
Trigger: TTCCCCAGGGACAAACTGGCAGAGCTCCACGGGAAC...CACTTTGTTACTTGTTTCTGTCCCCGGGAGCCTCAGGGCTCTGAGAGCTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp CCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTCTCCCCACAAACATGTTCCCGTaGAGCTCTGCCAGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: PQRQCKPLLIPHFKVGLPTNMFP*SSASLS
Trigger: GGACAAACTGGCAGAGCTCCACGGGAACATGTTTGT...GGGGAGACCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTCCCTTGGGCTCCAGCTTaGGGGTGGGCGGGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: EIVFIALRTFPEAWWTHVPWAPA*GWAGGA
Trigger: TGCCCCGCCCGCCCACCCCCAAGCTGGAGCCCAAGG...GACGTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR TCA 90 bp AGCACAGCTCTCAGAGCCCTGAGGCTCCCGGGGACAGAAACAAGTAACAAAGTGAGTGCAAGCCTCTACTaGTCCCCCACTTCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: STALRALRLPGTETSNKVSASLY*SPTSRW
Trigger: CCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACT...CACTTTGTTACTTGTTTCTGTCCCCGGGAGCCTCAGGGCTCTGAGAGCTGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp AGCACAGCTCTCAGAGCCCTGAGGCTCCCGGGGACAGAAACAAGTAACAAAGTGTGTGGAACACCACACTaGAAGACTGCCAGACCAGCC +
Preference number: 4 (lower is better)
Translates to: STALRALRLPGTETSNKVCGTPH*KTARPA
Trigger: GGCTGGTCTGGCAGTCTTCCAGTGTGGTGTTCCACA...CACTTTGTTACTTGTTTCTGTCCCCGGGAGCCTCAGGGCTCTGAGAGCTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000601488.5
CDS-3UTR CCA 90 bp CAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTCTCACAAACATGTTCCCGTaGAGCTCTGCCAGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: QPQRQCKPLLIPHFKVGLTNMFP*SSASLS
Trigger: GGACAAACTGGCAGAGCTCCACGGGAACATGTTTGT...GAGACCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp TGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGCAACTGCGTCTTACACTTaGCACATTCTTCCACAAACA +
Preference number: 4 (lower is better)
Translates to: CGRGSPVTSGVWLLPGTATASYT*HILPQT
Trigger: TGTTTGTGGAAGAATGTGCCAAGTGTAAGACGCAGT...TGCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GTACTGCGTCTTACACTTGGCACATTCTTCCACAAACATGTTCCCGTGGAGCTCTCCCCCACTTCAAGGTaGGTCTCCCCTCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: VLRLTLGTFFHKHVPVELSPTSR*VSPPAG
Trigger: CCCTGCAGGAGGGGAGACCCACCTTGAAGTGGGGGA...GAGCTCCACGGGAACATGTTTGTGGAAGAATGTGCCAAGTGTAAGACGCAGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR TCA 90 bp GGGTGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCTTGTTTTTATTGCATTaGGGACTTTTCCAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: GCGRGSPVTSGVWLLPGTLFLLH*GLFQKP
Trigger: AGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAA...GGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp GAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTCCCCACGCGCTCCAGCTaGACCAGCGCCATGTGGGTC +
Preference number: 4 (lower is better)
Translates to: EIVFIALRTFPEAWWTHVPTRSS*TSAMWV
Trigger: GACCCACATGGCGCTGGTGCAGCTGGAGCGCGTGGG...GACGTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
CDS-3UTR GCA 90 bp GAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTCCCCTCAGCTCTCCCCTaGAGGCTCGCAGCCCCCTTG +
Preference number: 4 (lower is better)
Translates to: EIVFIALRTFPEAWWTHVPSALP*RLAAPL
Trigger: CAAGGGGGCTGCGAGCCTGCAGGGGAGAGCTGAGGG...GACGTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000337491.7
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp CTTACACTTGGCACATTCTTCCACAAACATGTTCCCGTGGAGCTCTGCCAGTTTGACCTCGCTCCTCCATaGTCCAGACTCCGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: LTLGTFFHKHVPVELCQFDLAPP*SRLRGD
Trigger: GTCCCCACGGAGTCTGGACCATGGAGGAGCGAGGTC...AAACTGGCAGAGCTCCACGGGAACATGTTTGTGGAAGAATGTGCCAAGTGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp GGCCCTGGGGACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCACTGCGTCTTACACTTaGCACATTCTTCCACAAACA +
Preference number: 4 (lower is better)
Translates to: GPGDRGSSLLFKLETREGTASYT*HILPQT
Trigger: TGTTTGTGGAAGAATGTGCCAAGTGTAAGACGCAGT...GCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTCCCCAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp AATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTCTCTGCAGAGCCGGCCCGTaGCCTTCAGGCCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: NCFYCIEDFSRSLVDPRLCRAGP*PSGPWC
Trigger: GCACCATGGGCCTGAAGGCCACGGGCCGGCTCTGCA...GAGACGTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR TCA 90 bp GAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTCTGCCAGAGGCAGTGCTaGTGCCGGCACCCGTGTGGA +
Preference number: 4 (lower is better)
Translates to: EIVFIALRTFPEAWWTHVCQRQC*CRHPCG
Trigger: TCCACACGGGTGCCGGCATCAGCACTGCCTCTGGCA...GACGTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000601488.5
CDS-3UTR GCA 90 bp AAAGAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACCCGGGAGGCCGCACTTaGCCTTGTCCGCGTACGGCG +
Preference number: 4 (lower is better)
Translates to: KEIVFIALRTFPEAWWTHPGGRT*PCPRTA
Trigger: CGCCGTACGCGGACAAGGGCAAGTGCGGCCTCCCGG...GTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp GAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTCCCGCTGGGCCGGATCTaGAGCGATGTACCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: EIVFIALRTFPEAWWTHVPLGRI*SDVPSV
Trigger: CACGCTGGGTACATCGCTGCAGATCCGGCCCAGCGG...GACGTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
CDS-3UTR GCA 90 bp AAAGAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACTGGGCGCAGGGCTCCTaGTTGGGGCCGGCGGGGATA +
Preference number: 4 (lower is better)
Translates to: KEIVFIALRTFPEAWWTHWAQGS*LGPAGI
Trigger: TATCCCCGCCGGCCCCAAGCAGGAGCCCTGCGCCCA...GTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GTACTGCGTCTTACACTTGGCACATTCTTCCACAAACATGTTCCCGTGGAGCTCCTGCCAGTTTGTCCCTaGGGAAGCCTGAGCGCACAT +
Preference number: 4 (lower is better)
Translates to: VLRLTLGTFFHKHVPVELLPVCP*GSLSAH
Trigger: ATGTGCGCTCAGGCTTCCCCAGGGACAAACTGGCAG...GAGCTCCACGGGAACATGTTTGTGGAAGAATGTGCCAAGTGTAAGACGCAGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp GGGGATCTCCAGCCCCAGGTGCTTCATGAGCCGGGTCATGACCTCGTCAACGTAACTGCGTCTTACACTTaGCACATTCTTCCACAAACA +
Preference number: 4 (lower is better)
Translates to: GDLQPQVLHEPGHDLVNVTASYT*HILPQT
Trigger: TGTTTGTGGAAGAATGTGCCAAGTGTAAGACGCAGT...TACGTTGACGAGGTCATGACCCGGCTCATGAAGCACCTGGGGCTGGAGATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000599365.5
ENST00000600938.5
ENST00000601571.1
CDS-3UTR CCA 90 bp GAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTCGGAGGAGGGGTAGGGTaGGCTGTAGGGGGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: EIVFIALRTFPEAWWTHVGGGVG*AVGGPE
Trigger: TTCTGGGCCCCCTACAGCCCACCCTACCCCTCCTCC...GACGTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTCGGTCGGCGTTCCTGCTaGCCTCATCGGCGAGTGCCA +
Preference number: 4 (lower is better)
Translates to: EIVFIALRTFPEAWWTHVGRRSC*PHRRVP
Trigger: TGGCACTCGCCGATGAGGCCAGCAGGAACGCCGACC...GACGTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337491.7
ENST00000600938.5
CDS-3UTR CCA 90 bp AAAGAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGCGGCAGGTTCCCGCTaGGCCGGATCTGCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: KEIVFIALRTFPEAWWTHAAGSR*AGSAGL
Trigger: GAGGCCAGCAGATCCGGCCCAGCGGGAACCTGCCGC...GTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601488.5
CDS-3UTR TCA 90 bp AAAGAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTCCCTGGGGAAGCCTaGGCGCACATGGAGCCCGTC +
Preference number: 4 (lower is better)
Translates to: KEIVFIALRTFPEAWWTHVPGEA*AHMEPV
Trigger: GACGGGCTCCATGTGCGCTCAGGCTTCCCCAGGGAC...GTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp GAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTCAGCCCGTCCACGTTCTaGCTGACCAGGAAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: EIVFIALRTFPEAWWTHVSPSTF*LTRKRR
Trigger: CCTCCGCTTCCTGGTCAGCCAGAACGTGGACGGGCT...GACGTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp ACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGCCTCACACTGCGTCTTACACTTaGCACATTCTTCCACAAACA +
Preference number: 4 (lower is better)
Translates to: TEGVHSCLSWRPGRAQPHTASYT*HILPQT
Trigger: TGTTTGTGGAAGAATGTGCCAAGTGTAAGACGCAGT...GTGAGGCTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTCAGGTGGTGTCGAACTTaGGGGCCAGACCTCGCTCCT +
Preference number: 4 (lower is better)
Translates to: EIVFIALRTFPEAWWTHVRWCRT*GPDLAP
Trigger: AGGAGCGAGGTCTGGCCCCCAAGTTCGACACCACCT...GACGTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp AATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTCTCTGGCCTTCAGGCCCATaGTGCCCACGACTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: NCFYCIEDFSRSLVDPRLWPSGP*CPRLCL
Trigger: GAGACACAGTCGTGGGCACCATGGGCCTGAAGGCCA...GAGACGTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp GAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTCTCGTGCTTGGTGGGCTaGAGGTTGACGATGACCAGG +
Preference number: 4 (lower is better)
Translates to: EIVFIALRTFPEAWWTHVSCLVG*RLTMTR
Trigger: CCTGGTCATCGTCAACCTGCAGCCCACCAAGCACGA...GACGTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp AATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTCTCCAACGTAGCCATGGATaGGGAGGTCAGCATGGCGGT +
Preference number: 4 (lower is better)
Translates to: NCFYCIEDFSRSLVDPRLQRSHG*GGQHGG
Trigger: ACCGCCATGCTGACCTCCGCATCCATGGCTACGTTG...GAGACGTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp AAAGAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACATGGTCCAGACTCCGTaGGGACCCCTGAAGTCGGGG +
Preference number: 4 (lower is better)
Translates to: KEIVFIALRTFPEAWWTHMVQTP*GPLKSG
Trigger: CCCCGACTTCAGGGGTCCCCACGGAGTCTGGACCAT...GTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305232.10
ENST00000337491.7
CDS-3UTR CCA 90 bp GAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTCCTGCCAGTTTGTCCCTaGGGAAGCCTGAGCGCACAT +
Preference number: 4 (lower is better)
Translates to: EIVFIALRTFPEAWWTHVLPVCP*GSLSAH
Trigger: ATGTGCGCTCAGGCTTCCCCAGGGACAAACTGGCAG...GACGTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp AAAGAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACAGCTGGGGACCGCCTTaGCCTTCACCCTTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: KEIVFIALRTFPEAWWTHSWGPP*PSPFWG
Trigger: CCCCCAAAAGGGTGAAGGCCAAGGCGGTCCCCAGCT...GTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp GAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTCCACTCCTGTTTAAGCTaGAGACCAGGGAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: EIVFIALRTFPEAWWTHVHSCLS*RPGRAQ
Trigger: CTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTG...GACGTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR TCA 90 bp GAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTCAGTGCAAGCCTCTACTaGTCCCCCACTTCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: EIVFIALRTFPEAWWTHVSASLY*SPTSRW
Trigger: CCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACT...GACGTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CCA 90 bp AAAGAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGCGCGCTCTCAAAGGTaGTGTCGAACTTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: KEIVFIALRTFPEAWWTHARSQR*CRTWGP
Trigger: TGGCCCCCAAGTTCGACACCACCTTTGAGAGCGCGC...GTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CCA 90 bp AAAGAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACCCTCCCAGTCTAGGATaGTGTCCCTCAGCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: KEIVFIALRTFPEAWWTHPPSLG*CPSALP
Trigger: GGGGAGAGCTGAGGGACACCATCCTAGACTGGGAGG...GTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337491.7
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp AAAGAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACCAACGTAGCCATGGATaGGGAGGTCAGCATGGCGGT +
Preference number: 4 (lower is better)
Translates to: KEIVFIALRTFPEAWWTHQRSHG*GGQHGG
Trigger: ACCGCCATGCTGACCTCCGCATCCATGGCTACGTTG...GTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR GCA 90 bp AAAGAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACATCTCCAGCCCCAGGTaGTTCATGAGCCGGGTCATG +
Preference number: 4 (lower is better)
Translates to: KEIVFIALRTFPEAWWTHISSPR*FMSRVM
Trigger: CATGACCCGGCTCATGAAGCACCTGGGGCTGGAGAT...GTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR TCA 90 bp AATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTCTCTTGTTTTTATTGCATTaGGGACTTTTCCAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: NCFYCIEDFSRSLVDPRLLFLLH*GLFQKP
Trigger: AGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAA...GAGACGTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp GCCGAGGGGCGGGACGGGTCAGGCGTGGGGGACAGAGGGTGCATGGTGGCCCTGCGGCCTCCCCGGCGCTaGGTAGCCAGCGGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: AEGRDGSGVGDRGCMVALRPPRR*VASGRF
Trigger: GAACCTGCCGCTGGCTACCAAGCGCCGGGGAGGCCG...CAGGGCCACCATGCACCCTCTGTCCCCCACGCCTGACCCGTCCCGCCCCTCGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000601571.1
CDS-3UTR CAA 90 bp TGGCAGCGCCCTCTCCAGCACACGGGGGCCGTCCCAGGCGGGGATCTCCAGCCCGCGCAGGGCTCCTGCTaGGGGCCGGCGGGGATAGAG +
Preference number: 5 (lower is better)
Translates to: WQRPLQHTGAVPGGDLQPAQGSC*GPAGIE
Trigger: CTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGCGC...GGGCTGGAGATCCCCGCCTGGGACGGCCCCCGTGTGCTGGAGAGGGCGCTGCCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp TGGCAGCGCCCTCTCCAGCACACGGGGGCCGTCCCAGGCGGGGATCTCCAGCCCGTGGGCCGCTCCCGTTaGGGGCTGGCGGGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: WQRPLQHTGAVPGGDLQPVGRSR*GLAGSE
Trigger: CTCAGAGCCCGCCAGCCCCAAACGGGAGCGGCCCAC...GGGCTGGAGATCCCCGCCTGGGACGGCCCCCGTGTGCTGGAGAGGGCGCTGCCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp GCGCAGGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGACGGCCTCCCCGGCGCTaGGTAGCCAGCGGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: AQGSCLGPAGIEPLIRVGRPPRR*VASGRF
Trigger: GAACCTGCCGCTGGCTACCAAGCGCCGGGGAGGCCG...TCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp GCAGGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAGATCCTTGGGCTCCAGCTaGGGGGTGGGCGGGCGGGGC +
Preference number: 5 (lower is better)
Translates to: AGLLLGAGGDRAVDPGGRSLGSS*GVGGRG
Trigger: GCCCCGCCCGCCCACCCCCAAGCTGGAGCCCAAGGA...TCTCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp GCGCAGGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAGCGGGCTCTGAGCCGTaGTGCTGGGCGCAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: AQGSCLGPAGIEPLIRVGAGSEP*CWAQGS
Trigger: GGAGCCCTGCGCCCAGCACAACGGCTCAGAGCCCGC...TCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp TGGCAGCGCCCTCTCCAGCACACGGGGGCCGTCCCAGGCGGGGATCTCCAGCCCGCATGGCGGTCGTGCTaGGTGGGCTGCAGGTTGACG +
Preference number: 5 (lower is better)
Translates to: WQRPLQHTGAVPGGDLQPAWRSC*VGCRLT
Trigger: CGTCAACCTGCAGCCCACCAAGCACGACCGCCATGC...GGGCTGGAGATCCCCGCCTGGGACGGCCCCCGTGTGCTGGAGAGGGCGCTGCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp GCCCAGGGAGGGACCACGGAGGGCAGGTGTAACCCCTGGCCTGGAGCACAGCTCGCGCAGGGCTCCTGCTaGGGGCCGGCGGGGATAGAG +
Preference number: 5 (lower is better)
Translates to: AQGGTTEGRCNPWPGAQLAQGSC*GPAGIE
Trigger: CTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGCGC...GAGCTGTGCTCCAGGCCAGGGGTTACACCTGCCCTCCGTGGTCCCTCCCTGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS TCA 90 bp GCGGCAGGTTCCCGCTGGGCCGGATCTGCAGCGATGTACCCAGCGTaGTGGACAGGTCGGCGTTCCTGGGGCCGGGGAGCGTGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: AAGSRWAGSAAMYPA*WTGRRSWGRGAWAE
Trigger: CTCAGCCCACGCTCCCCGGCCCCAGGAACGCCGACCTGTCCATCACGCTGGGTACATCGCTGCAGATCCGGCCCAGCGGGAACCTGCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000596119.5
ENST00000600540.5
ENST00000601069.5
CDS GCA 90 bp CAGGGCATGGGTGGGGGTGGCTCACCTGCAGGCTCGCAGCCCCCTTaGCTTAGCCACGGTGCAGAGCCGGCCCGTGGCCTTCAGGCCCAT +
Preference number: 5 (lower is better)
Translates to: QGMGGGGSPAGSQPP*LSHGAEPARGLQAH
Trigger: ATGGGCCTGAAGGCCACGGGCCGGCTCTGCACCGTGGCTAAGGCAAGGGGGCTGCGAGCCTGCAGGTGAGCCACCCCCACCCATGCCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000595670.5
ENST00000596119.5
ENST00000599394.1
ENST00000601069.5
CDS-3UTR CAA 90 bp GCAGGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAGATCCGGGAGGCCGCACTaGCCCTTGTCCGCGTACGGC +
Preference number: 5 (lower is better)
Translates to: AGLLLGAGGDRAVDPGGRSGRPH*PLSAYG
Trigger: GCCGTACGCGGACAAGGGCAAGTGCGGCCTCCCGGA...TCTCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp GGGTGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCTCCTTGGGCTCCAGCTaGGGGGTGGGCGGGCGGGGC +
Preference number: 5 (lower is better)
Translates to: GCGRGSPVTSGVWLLPGTSLGSS*GVGGRG
Trigger: GCCCCGCCCGCCCACCCCCAAGCTGGAGCCCAAGGA...GGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACACCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp CAGGGAGGGACCACGGAGGGCAGGTGTAACCCCTGGCCTGGAGCACAGCTCTCATCCTTGGGCTCCAGCTaGGGGGTGGGCGGGCGGGGC +
Preference number: 5 (lower is better)
Translates to: QGGTTEGRCNPWPGAQLSSLGSS*GVGGRG
Trigger: GCCCCGCCCGCCCACCCCCAAGCTGGAGCCCAAGGA...TGAGAGCTGTGCTCCAGGCCAGGGGTTACACCTGCCCTCCGTGGTCCCTCCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp GGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAGATTCGTGGGCCGCTCCCGTTaGGGGCTGGCGGGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: GLLLGAGGDRAVDPGGRFVGRSR*GLAGSE
Trigger: CTCAGAGCCCGCCAGCCCCAAACGGGAGCGGCCCAC...GAATCTCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS GCA 90 bp CCCCGGCGCTTGGTAGCCAGCGGCAGGTTCCCGCTGGGCCGGATCTaGAGCGATGTACCCAGCGTGATGGACAGGTCGGCGTTCCTGGGG +
Preference number: 5 (lower is better)
Translates to: PRRLVASGRFPLGRI*SDVPSVMDRSAFLG
Trigger: CCCCAGGAACGCCGACCTGTCCATCACGCTGGGTACATCGCTGCAGATCCGGCCCAGCGGGAACCTGCCGCTGGCTACCAAGCGCCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000596119.5
ENST00000600540.5
ENST00000601069.5
CDS-3UTR CAA 90 bp GCCCAGGGAGGGACCACGGAGGGCAGGTGTAACCCCTGGCCTGGAGCACAGCTCAGGCCGCACTTGCCCTaGTCCGCGTACGGCGACAGC +
Preference number: 5 (lower is better)
Translates to: AQGGTTEGRCNPWPGAQLRPHLP*SAYGDS
Trigger: GCTGTCGCCGTACGCGGACAAGGGCAAGTGCGGCCT...GAGCTGTGCTCCAGGCCAGGGGTTACACCTGCCCTCCGTGGTCCCTCCCTGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp GGGTGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCCGGCCTCCCCGGCGCTaGGTAGCCAGCGGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: GCGRGSPVTSGVWLLPGTRPPRR*VASGRF
Trigger: GAACCTGCCGCTGGCTACCAAGCGCCGGGGAGGCCG...GGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp GTGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGCGCGGGCTCTGAGCCGTaGTGCTGGGCGCAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: VWQGLTCHLWGVASSRNRAGSEP*CWAQGS
Trigger: GGAGCCCTGCGCCCAGCACAACGGCTCAGAGCCCGC...GCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp GGGTGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGTGGGCCGCTCCCGTTaGGGGCTGGCGGGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: GCGRGSPVTSGVWLLPGTVGRSR*GLAGSE
Trigger: CTCAGAGCCCGCCAGCCCCAAACGGGAGCGGCCCAC...GGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS GCA 90 bp ACGTTCTGGCTGACCAGGAAGCGGAGGAGGCCCACGCGCTCCAGCTaGACCAGCGCCATGTGGGTCTGCGTGGGCCGCGCGCTCTCAAAG +
Preference number: 5 (lower is better)
Translates to: TFWLTRKRRRPTRSS*TSAMWVCVGRALSK
Trigger: CTTTGAGAGCGCGCGGCCCACGCAGACCCACATGGCGCTGGTGCAGCTGGAGCGCGTGGGCCTCCTCCGCTTCCTGGTCAGCCAGAACGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000595670.5
ENST00000596119.5
ENST00000596298.5
ENST00000599365.5
ENST00000599394.1
ENST00000600540.5
ENST00000600938.5
CDS GCA 90 bp GTCAAGGCCAGCCCCACTCCCGAGTCAGCCTTTGGGATCCCGCCCTaGCCTCCTCTGCGGTCCGTTGGCGGGGTCATTGATCTGGGCGGG +
Preference number: 5 (lower is better)
Translates to: VKASPTPESAFGIPP*PPLRSVGGVIDLGG
Trigger: CCCGCCCAGATCAATGACCCCGCCAACGGACCGCAGAGGAGGGCAGGGCGGGATCCCAAAGGCTGACTCGGGAGTGGGGCTGGCCTTGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000596119.5
ENST00000600540.5
ENST00000601069.5
CDS-3UTR CAA 90 bp CAGGGAGGGACCACGGAGGGCAGGTGTAACCCCTGGCCTGGAGCACAGCTCTCATCCGGGAGGCCGCACTaGCCCTTGTCCGCGTACGGC +
Preference number: 5 (lower is better)
Translates to: QGGTTEGRCNPWPGAQLSSGRPH*PLSAYG
Trigger: GCCGTACGCGGACAAGGGCAAGTGCGGCCTCCCGGA...TGAGAGCTGTGCTCCAGGCCAGGGGTTACACCTGCCCTCCGTGGTCCCTCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp GCGCAGGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAAAGGTGGTGTCGAACTaGGGGGCCAGACCTCGCTCC +
Preference number: 5 (lower is better)
Translates to: AQGSCLGPAGIEPLIRVGKVVSN*GARPRS
Trigger: GGAGCGAGGTCTGGCCCCCAAGTTCGACACCACCTT...TCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CAA 90 bp CAGGCTCGCAGCCCCCTTGCCTTAGCCACGGTGCAGAGCCGGCCCGTGGCCTTCTTGGTGGGCTGCAGGTaGACGATGACCAGGCGGCCT +
Preference number: 5 (lower is better)
Translates to: QARSPLALATVQSRPVAFLVGCR*TMTRRP
Trigger: AGGCCGCCTGGTCATCGTCAACCTGCAGCCCACCAA...GAAGGCCACGGGCCGGCTCTGCACCGTGGCTAAGGCAAGGGGGCTGCGAGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CAA 90 bp GGCCCTGGGGACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCTCCTTGGGCTCCAGCTaGGGGGTGGGCGGGCGGGGC +
Preference number: 5 (lower is better)
Translates to: GPGDRGSSLLFKLETREGSLGSS*GVGGRG
Trigger: GCCCCGCCCGCCCACCCCCAAGCTGGAGCCCAAGGA...GCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTCCCCAGGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp TGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGCAGCGGGCTCTGAGCCGTaGTGCTGGGCGCAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: CGRGSPVTSGVWLLPGTAAGSEP*CWAQGS
Trigger: GGAGCCCTGCGCCCAGCACAACGGCTCAGAGCCCGC...TGCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp CAGCGATGTACCCAGCGTGATGGACAGGTCGGCGTTCCTGCTGGCCTCATCGGCGCGGGCTCTGAGCCGTaGTGCTGGGCGCAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: QRCTQRDGQVGVPAGLIGAGSEP*CWAQGS
Trigger: GGAGCCCTGCGCCCAGCACAACGGCTCAGAGCCCGC...GCCGATGAGGCCAGCAGGAACGCCGACCTGTCCATCACGCTGGGTACATCGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600938.5
CDS-3UTR CAA 90 bp CAGGGAGGGACCACGGAGGGCAGGTGTAACCCCTGGCCTGGAGCACAGCTCTCAAGGCCGCACTTGCCCTaGTCCGCGTACGGCGACAGC +
Preference number: 5 (lower is better)
Translates to: QGGTTEGRCNPWPGAQLSRPHLP*SAYGDS
Trigger: GCTGTCGCCGTACGCGGACAAGGGCAAGTGCGGCCT...TGAGAGCTGTGCTCCAGGCCAGGGGTTACACCTGCCCTCCGTGGTCCCTCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp ACCCACGTCTCCCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACCGGCCTCCCCGGCGCTaGGTAGCCAGCGGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: THVSLQPQRQCKPLLIPHRPPRR*VASGRF
Trigger: GAACCTGCCGCTGGCTACCAAGCGCCGGGGAGGCCG...GTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGGGAGACGTGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp GAGCCGGGTCATGACCTCGTCAACGTAGCCATGGATGCGGAGGTCAGCATGGCGCGGCCTCCCCGGCGCTaGGTAGCCAGCGGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: EPGHDLVNVAMDAEVSMARPPRR*VASGRF
Trigger: GAACCTGCCGCTGGCTACCAAGCGCCGGGGAGGCCG...CGCCATGCTGACCTCCGCATCCATGGCTACGTTGACGAGGTCATGACCCGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000599365.5
ENST00000600938.5
ENST00000601571.1
CDS-3UTR CAA 90 bp GCAGGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAGATTGGTGGGCTGCAGGTaGACGATGACCAGGCGGCCT +
Preference number: 5 (lower is better)
Translates to: AGLLLGAGGDRAVDPGGRLVGCR*TMTRRP
Trigger: AGGCCGCCTGGTCATCGTCAACCTGCAGCCCACCAA...TCTCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp TGCAGGTTGACGATGACCAGGCGGCCTCCCCGGCGCTTGGTAGCCAGCGGCAGGTTGGTGGGCTGCAGGTaGACGATGACCAGGCGGCCT +
Preference number: 5 (lower is better)
Translates to: CRLTMTRRPPRRLVASGRLVGCR*TMTRRP
Trigger: AGGCCGCCTGGTCATCGTCAACCTGCAGCCCACCAA...CCTGCCGCTGGCTACCAAGCGCCGGGGAGGCCGCCTGGTCATCGTCAACCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CAA 90 bp GCGCTTGGTAGCCAGCGGCAGGTTCCCGCTGGGCCGGATCTGCAGCGATGTACCGCATGGCGGTCGTGCTaGGTGGGCTGCAGGTTGACG +
Preference number: 5 (lower is better)
Translates to: ALGSQRQVPAGPDLQRCTAWRSC*VGCRLT
Trigger: CGTCAACCTGCAGCCCACCAAGCACGACCGCCATGC...GGTACATCGCTGCAGATCCGGCCCAGCGGGAACCTGCCGCTGGCTACCAAGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CAA 90 bp GGTGCAGAGCCGGCCCGTGGCCTTCAGGCCCATGGTGCCCACGACTGTGTCTCGGCGGGGATAGAGCCGTaGATCCGGGTGGGAGATTCC +
Preference number: 5 (lower is better)
Translates to: GAEPARGLQAHGAHDCVSAGIEP*IRVGDS
Trigger: GGAATCTCCCACCCGGATCAACGGCTCTATCCCCGC...CGAGACACAGTCGTGGGCACCATGGGCCTGAAGGCCACGGGCCGGCTCTGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CAA 90 bp ACCCACGTCTCCCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACGCGCAGGGCTCCTGCTaGGGGCCGGCGGGGATAGAG +
Preference number: 5 (lower is better)
Translates to: THVSLQPQRQCKPLLIPHAQGSC*GPAGIE
Trigger: CTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGCGC...GTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGGGAGACGTGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp GGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAGATTCCAGCTGGGGACCGCCTaGGCCTTCACCCTTTTGGGG +
Preference number: 5 (lower is better)
Translates to: GLLLGAGGDRAVDPGGRFQLGTA*AFTLLG
Trigger: CCCCAAAAGGGTGAAGGCCAAGGCGGTCCCCAGCTG...GAATCTCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp ACGGTGCAGAGCCGGCCCGTGGCCTTCAGGCCCATGGTGCCCACGACTGTGTCTCAGCTGGGGACCGCCTaGGCCTTCACCCTTTTGGGG +
Preference number: 5 (lower is better)
Translates to: TVQSRPVAFRPMVPTTVSQLGTA*AFTLLG
Trigger: CCCCAAAAGGGTGAAGGCCAAGGCGGTCCCCAGCTG...AGACACAGTCGTGGGCACCATGGGCCTGAAGGCCACGGGCCGGCTCTGCACCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS CCA 90 bp GCACCAGCGCCATGTGGGTCTGCGTGGGCCGCGCGCTCTCAAAGGTaGTGTCGAACTTGGGGGCCAGACCTCGCTCCTCCATGGTCCAGA +
Preference number: 5 (lower is better)
Translates to: APAPCGSAWAARSQR*CRTWGPDLAPPWSR
Trigger: TCTGGACCATGGAGGAGCGAGGTCTGGCCCCCAAGTTCGACACCACCTTTGAGAGCGCGCGGCCCACGCAGACCCACATGGCGCTGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000595670.5
ENST00000596119.5
ENST00000596298.5
ENST00000599365.5
ENST00000599394.1
ENST00000600540.5
ENST00000600938.5
CDS-3UTR CAA 90 bp GCCAGCGGCAGGTTCCCGCTGGGCCGGATCTGCAGCGATGTACCCAGCGTGATGAAGGTGGTGTCGAACTaGGGGGCCAGACCTCGCTCC +
Preference number: 5 (lower is better)
Translates to: ASGRFPLGRICSDVPSVMKVVSN*GARPRS
Trigger: GGAGCGAGGTCTGGCCCCCAAGTTCGACACCACCTT...CATCACGCTGGGTACATCGCTGCAGATCCGGCCCAGCGGGAACCTGCCGCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CAA 90 bp GGGTGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGCATGGCGGTCGTGCTaGGTGGGCTGCAGGTTGACG +
Preference number: 5 (lower is better)
Translates to: GCGRGSPVTSGVWLLPGTAWRSC*VGCRLT
Trigger: CGTCAACCTGCAGCCCACCAAGCACGACCGCCATGC...GGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp GGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAGATTCGTGGGAGATTCCTCCTaGGGCTCCAGCTTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: GLLLGAGGDRAVDPGGRFVGDSS*GSSLGV
Trigger: CACCCCCAAGCTGGAGCCCAAGGAGGAATCTCCCAC...GAATCTCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp CCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGGCGCAGGGCTCCTGCTaGGGGCCGGCGGGGATAGAG +
Preference number: 5 (lower is better)
Translates to: PPAPKAVQASTDPPLQGGAQGSC*GPAGIE
Trigger: CTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGCGC...CCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp CCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGGTGGGCCGCTCCCGTTaGGGGCTGGCGGGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: PPAPKAVQASTDPPLQGGVGRSR*GLAGSE
Trigger: CTCAGAGCCCGCCAGCCCCAAACGGGAGCGGCCCAC...CCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp GGCCCTGGGGACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCAGGCCGCACTTGCCCTaGTCCGCGTACGGCGACAGC +
Preference number: 5 (lower is better)
Translates to: GPGDRGSSLLFKLETREGRPHLP*SAYGDS
Trigger: GCTGTCGCCGTACGCGGACAAGGGCAAGTGCGGCCT...GCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTCCCCAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp CCCCAGGTGCTTCATGAGCCGGGTCATGACCTCGTCAACGTAGCCATGGATGCGTCCGGGAGGCCGCACTaGCCCTTGTCCGCGTACGGC +
Preference number: 5 (lower is better)
Translates to: PQVLHEPGHDLVNVAMDASGRPH*PLSAYG
Trigger: GCCGTACGCGGACAAGGGCAAGTGCGGCCTCCCGGA...CGCATCCATGGCTACGTTGACGAGGTCATGACCCGGCTCATGAAGCACCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000599365.5
ENST00000600938.5
ENST00000601571.1
CDS-3UTR CAA 90 bp GTGTGGCAGGGGCTCACCTGTCACCTCTGGGGTGTGGCTTCTTCCCGGAACCGCAAGGTGGTGTCGAACTaGGGGGCCAGACCTCGCTCC +
Preference number: 5 (lower is better)
Translates to: VWQGLTCHLWGVASSRNRKVVSN*GARPRS
Trigger: GGAGCGAGGTCTGGCCCCCAAGTTCGACACCACCTT...GCGGTTCCGGGAAGAAGCCACACCCCAGAGGTGACAGGTGAGCCCCTGCCACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CAA 90 bp CAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTCTCCGGCCTCCCCGGCGCTaGGTAGCCAGCGGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: QPQRQCKPLLIPHFKVGLRPPRR*VASGRF
Trigger: GAACCTGCCGCTGGCTACCAAGCGCCGGGGAGGCCG...GAGACCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp TTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAGATTCCTCCTTGGGCGTGGGAGATTCCTCCTaGGGCTCCAGCTTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: LGPAGIEPLIRVGDSSLGVGDSS*GSSLGV
Trigger: CACCCCCAAGCTGGAGCCCAAGGAGGAATCTCCCAC...GCCCAAGGAGGAATCTCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp ACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGCCTCACGCGCAGGGCTCCTGCTaGGGGCCGGCGGGGATAGAG +
Preference number: 5 (lower is better)
Translates to: TEGVHSCLSWRPGRAQPHAQGSC*GPAGIE
Trigger: CTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGCGC...GTGAGGCTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp CAGCCCCAGGTGCTTCATGAGCCGGGTCATGACCTCGTCAACGTAGCCATGGATGCGCAGGGCTCCTGCTaGGGGCCGGCGGGGATAGAG +
Preference number: 5 (lower is better)
Translates to: QPQVLHEPGHDLVNVAMDAQGSC*GPAGIE
Trigger: CTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGCGC...ATCCATGGCTACGTTGACGAGGTCATGACCCGGCTCATGAAGCACCTGGGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CAA 90 bp GACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGCCTCAGCGGGCTCTGAGCCGTaGTGCTGGGCGCAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: DRGSSLLFKLETREGPASAGSEP*CWAQGS
Trigger: GGAGCCCTGCGCCCAGCACAACGGCTCAGAGCCCGC...TGAGGCTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp ACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGCCTCACGTGGGCCGCTCCCGTTaGGGGCTGGCGGGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: TEGVHSCLSWRPGRAQPHVGRSR*GLAGSE
Trigger: CTCAGAGCCCGCCAGCCCCAAACGGGAGCGGCCCAC...GTGAGGCTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp GCAGGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAGAGTCGAAGATCTCCCTTaGCGCCTGTCGTCCCCTCTT +
Preference number: 5 (lower is better)
Translates to: AGLLLGAGGDRAVDPGGRVEDLP*RLSSPL
Trigger: AAGAGGGGACGACAGGCGCAAAGGGAGATCTTCGAC...TCTCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000594279.5
CDS TCA 90 bp TGGGATCCCGCCCTGCCCTCCTCTGCGGTCCGTTGGCGGGGTCATTaGTCTGGGCGGGCCCTTAGACACTTCCGGGGAGTATCACAGTGT +
Preference number: 5 (lower is better)
Translates to: WDPALPSSAVRWRGH*SGRALRHFRGVSQC
Trigger: ACACTGTGATACTCCCCGGAAGTGTCTAAGGGCCCGCCCAGATCAATGACCCCGCCAACGGACCGCAGAGGAGGGCAGGGCGGGATCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000596119.5
ENST00000600540.5
ENST00000601069.5
CDS GCA 90 bp GCAGTGCTGATGCCGGCACCCGTGTGGAACACCACACTGGAAGACTaGCAGACCAGCCTCGCCAGTTCCCACACCTTCCGCTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: AVLMPAPVWNTTLED*QTSLASSHTFRSSS
Trigger: GGAGCTGGAGCGGAAGGTGTGGGAACTGGCGAGGCTGGTCTGGCAGTCTTCCAGTGTGGTGTTCCACACGGGTGCCGGCATCAGCACTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000594341.1
ENST00000595670.5
ENST00000596298.5
ENST00000597896.5
ENST00000601069.5
ENST00000601488.5
ENST00000601571.1
CDS-3UTR CAA 90 bp ACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGCCTCACTCCGGGAGGCCGCACTaGCCCTTGTCCGCGTACGGC +
Preference number: 5 (lower is better)
Translates to: TEGVHSCLSWRPGRAQPHSGRPH*PLSAYG
Trigger: GCCGTACGCGGACAAGGGCAAGTGCGGCCTCCCGGA...GTGAGGCTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp CAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACTTCAAGGTGGGTCTCTCCGGGAGGCCGCACTaGCCCTTGTCCGCGTACGGC +
Preference number: 5 (lower is better)
Translates to: QPQRQCKPLLIPHFKVGLSGRPH*PLSAYG
Trigger: GCCGTACGCGGACAAGGGCAAGTGCGGCCTCCCGGA...GAGACCCACCTTGAAGTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp ACCCACGTCTCCCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACGCATGGCGGTCGTGCTaGGTGGGCTGCAGGTTGACG +
Preference number: 5 (lower is better)
Translates to: THVSLQPQRQCKPLLIPHAWRSC*VGCRLT
Trigger: CGTCAACCTGCAGCCCACCAAGCACGACCGCCATGC...GTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGGGAGACGTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS CCA 90 bp CGAGTGCCAGGTCCCGGTCGGGCAGGGAGTCCTCCCAGTCTAGGATaGTGTCCCTCAGCTCTCCCCTGCAATGAGGAAGCTGAGGAGAGT +
Preference number: 5 (lower is better)
Translates to: RVPGPGRAGSPPSLG*CPSALPCNEEAEES
Trigger: ACTCTCCTCAGCTTCCTCATTGCAGGGGAGAGCTGAGGGACACCATCCTAGACTGGGAGGACTCCCTGCCCGACCGGGACCTGGCACTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595670.5
ENST00000596119.5
ENST00000601069.5
CDS CCA 90 bp GGGCCCTTAGACACTTCCGGGGAGTATCACAGTGTGGTAAGAGCTTaGACACCTAGGGTGGGACCCTGGCTCGGTCACCTCCCGGCTGGG +
Preference number: 5 (lower is better)
Translates to: GPLDTSGEYHSVVRA*TPRVGPWLGHLPAG
Trigger: CCCAGCCGGGAGGTGACCGAGCCAGGGTCCCACCCTAGGTGTCCAAGCTCTTACCACACTGTGATACTCCCCGGAAGTGTCTAAGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000596119.5
ENST00000600540.5
ENST00000601069.5
CDS-3UTR CAA 90 bp GCCGAGGGGCGGGACGGGTCAGGCGTGGGGGACAGAGGGTGCATGGTGGCCCTGTACTGCGTCTTACACTaGGCACATTCTTCCACAAAC +
Preference number: 5 (lower is better)
Translates to: AEGRDGSGVGDRGCMVALYCVLH*AHSSTN
Trigger: GTTTGTGGAAGAATGTGCCAAGTGTAAGACGCAGTA...CAGGGCCACCATGCACCCTCTGTCCCCCACGCCTGACCCGTCCCGCCCCTCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601571.1
CDS-3UTR CAA 90 bp AGCACAGCTCTCAGAGCCCTGAGGCTCCCGGGGACAGAAACAAGTAACAAAGTGCGGCCTCCCCGGCGCTaGGTAGCCAGCGGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: STALRALRLPGTETSNKVRPPRR*VASGRF
Trigger: GAACCTGCCGCTGGCTACCAAGCGCCGGGGAGGCCG...CACTTTGTTACTTGTTTCTGTCCCCGGGAGCCTCAGGGCTCTGAGAGCTGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp GACCCACGTCTCCCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCATTGGTGGGCTGCAGGTaGACGATGACCAGGCGGCCT +
Preference number: 5 (lower is better)
Translates to: DPRLPPAPKAVQASTDPPLVGCR*TMTRRP
Trigger: AGGCCGCCTGGTCATCGTCAACCTGCAGCCCACCAA...TGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGGGAGACGTGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp ACCCACGTCTCCCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACGTGGGAGATTCCTCCTaGGGCTCCAGCTTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: THVSLQPQRQCKPLLIPHVGDSS*GSSLGV
Trigger: CACCCCCAAGCTGGAGCCCAAGGAGGAATCTCCCAC...GTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGGGAGACGTGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp GGCCCTGGGGACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCGCGGGGATAGAGCCGTaGATCCGGGTGGGAGATTCC +
Preference number: 5 (lower is better)
Translates to: GPGDRGSSLLFKLETREGAGIEP*IRVGDS
Trigger: GGAATCTCCCACCCGGATCAACGGCTCTATCCCCGC...GCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTCCCCAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp CCTGGGGACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCACAGCTGGGGACCGCCTaGGCCTTCACCCTTTTGGGG +
Preference number: 5 (lower is better)
Translates to: PGDRGSSLLFKLETREGPQLGTA*AFTLLG
Trigger: CCCCAAAAGGGTGAAGGCCAAGGCGGTCCCCAGCTG...TGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTCCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp GGCCCATGGTGCCCACGACTGTGTCTCGGACGTACTGCGTCTTACACTTGGCACCAGCTGGGGACCGCCTaGGCCTTCACCCTTTTGGGG +
Preference number: 5 (lower is better)
Translates to: GPWCPRLCLGRTASYTWHQLGTA*AFTLLG
Trigger: CCCCAAAAGGGTGAAGGCCAAGGCGGTCCCCAGCTG...GTGCCAAGTGTAAGACGCAGTACGTCCGAGACACAGTCGTGGGCACCATGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS GCA 90 bp CAGGGAAGCCTCTGGCAGCCTGGTAGGCCTTGCCTCGACTTCCCCTaGACAATCACAGACCTGAAGTCGGGGATGCCAGAGGCAGTGCTG +
Preference number: 5 (lower is better)
Translates to: QGSLWQPGRPCLDFP*TITDLKSGMPEAVL
Trigger: CAGCACTGCCTCTGGCATCCCCGACTTCAGGTCTGTGATTGTGCAGGGGAAGTCGAGGCAAGGCCTACCAGGCTGCCAGAGGCTTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594341.1
CDS CCA 90 bp GCTCGGTCACCTCCCGGCTGGGCAGCACTGGATAGAGGAGACACCTaGCGGAAGCCTTGGTTTCCTTGTGTAGCACCCACCCAGAGCCAT +
Preference number: 5 (lower is better)
Translates to: ARSPPGWAALDRGDT*RKPWFPCVAPTQSH
Trigger: ATGGCTCTGGGTGGGTGCTACACAAGGAAACCAAGGCTTCCGCCAGGTGTCTCCTCTATCCAGTGCTGCCCAGCCGGGAGGTGACCGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000596119.5
ENST00000600540.5
ENST00000601069.5
CDS-3UTR CAA 90 bp AGCACAGCTCTCAGAGCCCTGAGGCTCCCGGGGACAGAAACAAGTAACAAAGTGTCCGGGAGGCCGCACTaGCCCTTGTCCGCGTACGGC +
Preference number: 5 (lower is better)
Translates to: STALRALRLPGTETSNKVSGRPH*PLSAYG
Trigger: GCCGTACGCGGACAAGGGCAAGTGCGGCCTCCCGGA...CACTTTGTTACTTGTTTCTGTCCCCGGGAGCCTCAGGGCTCTGAGAGCTGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp CCTGGGGACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAAAGGTGGTGTCGAACTaGGGGGCCAGACCTCGCTCC +
Preference number: 5 (lower is better)
Translates to: PGDRGSSLLFKLETREGPKVVSN*GARPRS
Trigger: GGAGCGAGGTCTGGCCCCCAAGTTCGACACCACCTT...TGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTCCCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CAA 90 bp GAGCCGGGTCATGACCTCGTCAACGTAGCCATGGATGCGGAGGTCAGCATGGCGTGGAGCTCTGCCAGTTaGTCCCTGGGGAAGCCTGAG +
Preference number: 5 (lower is better)
Translates to: EPGHDLVNVAMDAEVSMAWSSAS*SLGKPE
Trigger: CTCAGGCTTCCCCAGGGACAAACTGGCAGAGCTCCA...CGCCATGCTGACCTCCGCATCCATGGCTACGTTGACGAGGTCATGACCCGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CAA 90 bp TCACCTCTGGACAACACAGCAAGTCAGAGGCTGGGGTGTGGCAGGGGCTCACCTTTGGTGGGCTGCAGGTaGACGATGACCAGGCGGCCT +
Preference number: 5 (lower is better)
Translates to: SPLDNTASQRLGCGRGSPLVGCR*TMTRRP
Trigger: AGGCCGCCTGGTCATCGTCAACCTGCAGCCCACCAA...AGGTGAGCCCCTGCCACACCCCAGCCTCTGACTTGCTGTGTTGTCCAGAGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp GGGGATCTCCAGCCCCAGGTGCTTCATGAGCCGGGTCATGACCTCGTCAACGTATTGGTGGGCTGCAGGTaGACGATGACCAGGCGGCCT +
Preference number: 5 (lower is better)
Translates to: GDLQPQVLHEPGHDLVNVLVGCR*TMTRRP
Trigger: AGGCCGCCTGGTCATCGTCAACCTGCAGCCCACCAA...TACGTTGACGAGGTCATGACCCGGCTCATGAAGCACCTGGGGCTGGAGATCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000599365.5
ENST00000600938.5
ENST00000601571.1
CDS-3UTR CAA 90 bp ACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGCCTCACGCATGGCGGTCGTGCTaGGTGGGCTGCAGGTTGACG +
Preference number: 5 (lower is better)
Translates to: TEGVHSCLSWRPGRAQPHAWRSC*VGCRLT
Trigger: CGTCAACCTGCAGCCCACCAAGCACGACCGCCATGC...GTGAGGCTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp ACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGCCTCACCAGCTGGGGACCGCCTaGGCCTTCACCCTTTTGGGG +
Preference number: 5 (lower is better)
Translates to: TEGVHSCLSWRPGRAQPHQLGTA*AFTLLG
Trigger: CCCCAAAAGGGTGAAGGCCAAGGCGGTCCCCAGCTG...GTGAGGCTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp GCGGGGATCTCCAGCCCCAGGTGCTTCATGAGCCGGGTCATGACCTCGTCAACGTGGAGCTCTGCCAGTTaGTCCCTGAAGTCGGGGATG +
Preference number: 5 (lower is better)
Translates to: AGISSPRCFMSRVMTSSTWSSAS*SLKSGM
Trigger: CATCCCCGACTTCAGGGACAAACTGGCAGAGCTCCA...CGTTGACGAGGTCATGACCCGGCTCATGAAGCACCTGGGGCTGGAGATCCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000601571.1
CDS-3UTR CAA 90 bp CATGACCTCGTCAACGTAGCCATGGATGCGGAGGTCAGCATGGCGGTCCTGCCGCAGACACCTACGTGCTaGGTGGGCTGCAGGTTGACG +
Preference number: 5 (lower is better)
Translates to: HDLVNVAMDAEVSMAVLPQTPTC*VGCRLT
Trigger: CGTCAACCTGCAGCCCACCAAGCACGTAGGTGTCTG...CGGCAGGACCGCCATGCTGACCTCCGCATCCATGGCTACGTTGACGAGGTCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601571.1
CDS CCA 90 bp CCCGGCTGGGCAGCACTGGATAGAGGAGACACCTGGCGGAAGCCTTaGTTTCCTTGTGTAGCACCCACCCAGAGCCATGAGGTGACGAGT +
Preference number: 5 (lower is better)
Translates to: PGWAALDRGDTWRKP*FPCVAPTQSHEVTS
Trigger: ACTCGTCACCTCATGGCTCTGGGTGGGTGCTACACAAGGAAACCAAGGCTTCCGCCAGGTGTCTCCTCTATCCAGTGCTGCCCAGCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000596119.5
ENST00000600540.5
ENST00000601069.5
CDS-3UTR CAA 90 bp CATGACCTCGTCAACGTAGCCATGGATGCGGAGGTCAGCATGGCGGTCGTGCTTAAGGTGGTGTCGAACTaGGGGGCCAGACCTCGCTCC +
Preference number: 5 (lower is better)
Translates to: HDLVNVAMDAEVSMAVVLKVVSN*GARPRS
Trigger: GGAGCGAGGTCTGGCCCCCAAGTTCGACACCACCTT...AAGCACGACCGCCATGCTGACCTCCGCATCCATGGCTACGTTGACGAGGTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CAA 90 bp GGCCCTGGGGACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCTGGAGCTCTGCCAGTTaGTCCCTGAAGTCGGGGATG +
Preference number: 5 (lower is better)
Translates to: GPGDRGSSLLFKLETREGWSSAS*SLKSGM
Trigger: CATCCCCGACTTCAGGGACAAACTGGCAGAGCTCCA...GCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTCCCCAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601488.5
CDS CCA 90 bp GAGTATCACAGTGTGGTAAGAGCTTGGACACCTAGGGTGGGACCCTaGCTCGGTCACCTCCCGGCTGGGCAGCACTGGATAGAGGAGACA +
Preference number: 5 (lower is better)
Translates to: EYHSVVRAWTPRVGP*LGHLPAGQHWIEET
Trigger: TGTCTCCTCTATCCAGTGCTGCCCAGCCGGGAGGTGACCGAGCCAGGGTCCCACCCTAGGTGTCCAAGCTCTTACCACACTGTGATACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000596119.5
ENST00000600540.5
ENST00000601069.5
CDS-3UTR CAA 90 bp ACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGCCTCACTGGAGCTCTGCCAGTTaGTCCCTGGGGAAGCCTGAG +
Preference number: 5 (lower is better)
Translates to: TEGVHSCLSWRPGRAQPHWSSAS*SLGKPE
Trigger: CTCAGGCTTCCCCAGGGACAAACTGGCAGAGCTCCA...GTGAGGCTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CAA 90 bp GTCCACGTTCTGGCTGACCAGGAAGCGGAGGAGGCCCACGCGCTCCAGCTGCACTACTGCGTCTTACACTaGGCACATTCTTCCACAAAC +
Preference number: 5 (lower is better)
Translates to: VHVLADQEAEEAHALQLHYCVLH*AHSSTN
Trigger: GTTTGTGGAAGAATGTGCCAAGTGTAAGACGCAGTA...GTGCAGCTGGAGCGCGTGGGCCTCCTCCGCTTCCTGGTCAGCCAGAACGTGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CAA 90 bp AGCACAGCTCTCAGAGCCCTGAGGCTCCCGGGGACAGAAACAAGTAACAAAGTGTTGGTGGGCTGCAGGTaGACGATGACCAGGCGGCCT +
Preference number: 5 (lower is better)
Translates to: STALRALRLPGTETSNKVLVGCR*TMTRRP
Trigger: AGGCCGCCTGGTCATCGTCAACCTGCAGCCCACCAA...CACTTTGTTACTTGTTTCTGTCCCCGGGAGCCTCAGGGCTCTGAGAGCTGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp AGCACAGCTCTCAGAGCCCTGAGGCTCCCGGGGACAGAAACAAGTAACAAAGTGGCGGGGATAGAGCCGTaGATCCGGGTGGGAGATTCC +
Preference number: 5 (lower is better)
Translates to: STALRALRLPGTETSNKVAGIEP*IRVGDS
Trigger: GGAATCTCCCACCCGGATCAACGGCTCTATCCCCGC...CACTTTGTTACTTGTTTCTGTCCCCGGGAGCCTCAGGGCTCTGAGAGCTGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS CCA 90 bp GATGTGTTCTCATTCCCAGATGTGTGTGGCTCGCAGGGAAGCCTCTaGCAGCCTGGTAGGCCTTGCCTCGACTTCCCCTGCACAATCACA +
Preference number: 5 (lower is better)
Translates to: DVFSFPDVCGSQGSL*QPGRPCLDFPCTIT
Trigger: TGTGATTGTGCAGGGGAAGTCGAGGCAAGGCCTACCAGGCTGCCAGAGGCTTCCCTGCGAGCCACACACATCTGGGAATGAGAACACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594341.1
CDS-3UTR CAA 90 bp GGACGTACTGCGTCTTACACTTGGCACATTCTTCCACAAACATGTTCCCGTGGAAGGCCGCACTTGCCCTaGTCCGCGTACGGCGACAGC +
Preference number: 5 (lower is better)
Translates to: GRTASYTWHILPQTCSRGRPHLP*SAYGDS
Trigger: GCTGTCGCCGTACGCGGACAAGGGCAAGTGCGGCCT...TCCACGGGAACATGTTTGTGGAAGAATGTGCCAAGTGTAAGACGCAGTACGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CAA 90 bp CTTGGTAGCCAGCGGCAGGTTCCCGCTGGGCCGGATCTGCAGCGATGTACCCAGTACTGCGTCTTACACTaGGCACATTCTTCCACAAAC +
Preference number: 5 (lower is better)
Translates to: LGSQRQVPAGPDLQRCTQYCVLH*AHSSTN
Trigger: GTTTGTGGAAGAATGTGCCAAGTGTAAGACGCAGTA...CTGGGTACATCGCTGCAGATCCGGCCCAGCGGGAACCTGCCGCTGGCTACCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CAA 90 bp GCGCAGGGCTCCTGCTTGGGGCCGGCGGGGATAGAGCCGTTGATCCGGGTGGGAATTGTTTTTATTGCATaGAGGACTTTTCCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: AQGSCLGPAGIEPLIRVGIVFIA*RTFPEA
Trigger: GGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAAT...TCCCACCCGGATCAACGGCTCTATCCCCGCCGGCCCCAAGCAGGAGCCCTGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp AATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTCTCGCGGGCTCTGAGCCGTaGTGCTGGGCGCAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: NCFYCIEDFSRSLVDPRLAGSEP*CWAQGS
Trigger: GGAGCCCTGCGCCCAGCACAACGGCTCAGAGCCCGC...GAGACGTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp GTACTGCGTCTTACACTTGGCACATTCTTCCACAAACATGTTCCCGTGGAGCTCGCGGGGATAGAGCCGTaGATCCGGGTGGGAGATTCC +
Preference number: 5 (lower is better)
Translates to: VLRLTLGTFFHKHVPVELAGIEP*IRVGDS
Trigger: GGAATCTCCCACCCGGATCAACGGCTCTATCCCCGC...GAGCTCCACGGGAACATGTTTGTGGAAGAATGTGCCAAGTGTAAGACGCAGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CAA 90 bp AATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTCTCAGGCCGCACTTGCCCTaGTCCGCGTACGGCGACAGC +
Preference number: 5 (lower is better)
Translates to: NCFYCIEDFSRSLVDPRLRPHLP*SAYGDS
Trigger: GCTGTCGCCGTACGCGGACAAGGGCAAGTGCGGCCT...GAGACGTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp TCACCTCTGGACAACACAGCAAGTCAGAGGCTGGGGTGTGGCAGGGGCTCACCTTACTGCGTCTTACACTaGGCACATTCTTCCACAAAC +
Preference number: 5 (lower is better)
Translates to: SPLDNTASQRLGCGRGSPYCVLH*AHSSTN
Trigger: GTTTGTGGAAGAATGTGCCAAGTGTAAGACGCAGTA...AGGTGAGCCCCTGCCACACCCCAGCCTCTGACTTGCTGTGTTGTCCAGAGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp CCTGGGGACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCATACTGCGTCTTACACTaGGCACATTCTTCCACAAAC +
Preference number: 5 (lower is better)
Translates to: PGDRGSSLLFKLETREGPYCVLH*AHSSTN
Trigger: GTTTGTGGAAGAATGTGCCAAGTGTAAGACGCAGTA...TGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp CTTACACTTGGCACATTCTTCCACAAACATGTTCCCGTGGAGCTCTGCCAGTTTGTGGGAGATTCCTCCTaGGGCTCCAGCTTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: LTLGTFFHKHVPVELCQFVGDSS*GSSLGV
Trigger: CACCCCCAAGCTGGAGCCCAAGGAGGAATCTCCCAC...AAACTGGCAGAGCTCCACGGGAACATGTTTGTGGAAGAATGTGCCAAGTGTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CAA 90 bp ACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGCCTCACTACTGCGTCTTACACTaGGCACATTCTTCCACAAAC +
Preference number: 5 (lower is better)
Translates to: TEGVHSCLSWRPGRAQPHYCVLH*AHSSTN
Trigger: GTTTGTGGAAGAATGTGCCAAGTGTAAGACGCAGTA...GTGAGGCTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp GACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAGCCTCATACTGCGTCTTACACTaGGCACATTCTTCCACAAAC +
Preference number: 5 (lower is better)
Translates to: DRGSSLLFKLETREGPASYCVLH*AHSSTN
Trigger: GTTTGTGGAAGAATGTGCCAAGTGTAAGACGCAGTA...TGAGGCTGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp AATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTCTCGCATGGCGGTCGTGCTaGGTGGGCTGCAGGTTGACG +
Preference number: 5 (lower is better)
Translates to: NCFYCIEDFSRSLVDPRLAWRSC*VGCRLT
Trigger: CGTCAACCTGCAGCCCACCAAGCACGACCGCCATGC...GAGACGTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp GAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTCGTGGGAGATTCCTCCTaGGGCTCCAGCTTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: EIVFIALRTFPEAWWTHVVGDSS*GSSLGV
Trigger: CACCCCCAAGCTGGAGCCCAAGGAGGAATCTCCCAC...GACGTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp GAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTCGCGGGGATAGAGCCGTaGATCCGGGTGGGAGATTCC +
Preference number: 5 (lower is better)
Translates to: EIVFIALRTFPEAWWTHVAGIEP*IRVGDS
Trigger: GGAATCTCCCACCCGGATCAACGGCTCTATCCCCGC...GACGTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp CTCGTCAACGTAGCCATGGATGCGGAGGTCAGCATGGCGGTCGTGCTTGGTGGGATTGTTTTTATTGCATaGAGGACTTTTCCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: LVNVAMDAEVSMAVVLGGIVFIA*RTFPEA
Trigger: GGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAAT...CCCACCAAGCACGACCGCCATGCTGACCTCCGCATCCATGGCTACGTTGACGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CAA 90 bp ACCCACGTCTCCCTCCAGCCCCAAAGGCAGTGCAAGCCTCTACTGATCCCCCACATTGTTTTTATTGCATaGAGGACTTTTCCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: THVSLQPQRQCKPLLIPHIVFIA*RTFPEA
Trigger: GGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAAT...GTGGGGGATCAGTAGAGGCTTGCACTGCCTTTGGGGCTGGAGGGAGACGTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp GAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTCTGGAGCTCTGCCAGTTaGTCCCTGGGGAAGCCTGAG +
Preference number: 5 (lower is better)
Translates to: EIVFIALRTFPEAWWTHVWSSAS*SLGKPE
Trigger: CTCAGGCTTCCCCAGGGACAAACTGGCAGAGCTCCA...GACGTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CAA 90 bp AAAGAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACCAGCTGGGGACCGCCTaGGCCTTCACCCTTTTGGGG +
Preference number: 5 (lower is better)
Translates to: KEIVFIALRTFPEAWWTHQLGTA*AFTLLG
Trigger: CCCCAAAAGGGTGAAGGCCAAGGCGGTCCCCAGCTG...GTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp CCTGGGGACAGAGGGAGTTCACTCCTGTTTAAGCTGGAGACCAGGGAGGGCCCAATTGTTTTTATTGCATaGAGGACTTTTCCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: PGDRGSSLLFKLETREGPIVFIA*RTFPEA
Trigger: GGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAAT...TGGGCCCTCCCTGGTCTCCAGCTTAAACAGGAGTGAACTCCCTCTGTCCCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS-3UTR CAA 90 bp AAAGAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACTGGAGCTCTGCCAGTTaGTCCCTGGGGAAGCCTGAG +
Preference number: 5 (lower is better)
Translates to: KEIVFIALRTFPEAWWTHWSSAS*SLGKPE
Trigger: CTCAGGCTTCCCCAGGGACAAACTGGCAGAGCTCCA...GTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
CDS-3UTR CAA 90 bp GAAATTGTTTTTATTGCATTGAGGACTTTTCCAGAAGCCTGGTGGACCCACGTCATTGTTTTTATTGCATaGAGGACTTTTCCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: EIVFIALRTFPEAWWTHVIVFIA*RTFPEA
Trigger: GGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAAT...GACGTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAATGCAATAAAAACAATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000599365.5
ENST00000600938.5
ENST00000601488.5
CDS GCA 72 bp TCCCGCTGGGCCGGATCTGCTGGCCTCATCGGCGAGTaGCAGGTCCCGGTCGGGCAGGGAGTCCTCCCAGTC +
Preference number: 6 (lower is better)
Translates to: SRWAGSAGLIGE*QVPVGQGVLPV
Trigger: GACTGGGAGGACTCCCTGCCCGACCGGGACCTGGCACTCGCCGATGAGGCCAGCAGATCCGGCCCAGCGGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594279.5
ENST00000601488.5
CDS GCA 72 bp GGTGGGGGTGGCTCACCTGCAGGCTCGCAGCCCCCTTaGCTTAGCCACGGTGCAGAGCCGGCCCGTGGCCTT +
Preference number: 6 (lower is better)
Translates to: GGGGSPAGSQPP*LSHGAEPARGL
Trigger: AAGGCCACGGGCCGGCTCTGCACCGTGGCTAAGGCAAGGGGGCTGCGAGCCTGCAGGTGAGCCACCCCCACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000595670.5
ENST00000596119.5
ENST00000599394.1
ENST00000601069.5
CDS TCA 72 bp TCCCGCTGGGCCGGATCTGCAGCGATGTACCCAGCGTaGTGGACAGGTCGGCGTTCCTGGGGCCGGGGAGCG +
Preference number: 6 (lower is better)
Translates to: SRWAGSAAMYPA*WTGRRSWGRGA
Trigger: CGCTCCCCGGCCCCAGGAACGCCGACCTGTCCATCACGCTGGGTACATCGCTGCAGATCCGGCCCAGCGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000596119.5
ENST00000600540.5
ENST00000601069.5
CDS CAA 90 bp TTGGTGGGCTGCAGGTTGACGATGACCAGGCGGCCTCCCCGGCGCTaGGTAGCCAGCGGCAGGTTCCCGCTGGGCCGGATCTGCTGGCCT +
Preference number: 6 (lower is better)
Translates to: LVGCRLTMTRRPPRR*VASGRFPLGRICWP
Trigger: AGGCCAGCAGATCCGGCCCAGCGGGAACCTGCCGCTGGCTACCAAGCGCCGGGGAGGCCGCCTGGTCATCGTCAACCTGCAGCCCACCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594279.5
ENST00000601488.5
CDS GCA 72 bp CCCACGCGCTCCAGCTGCACCAGCGCCATGTGGGTCTaGGTGGGCCGCGCGCTCTCAAAGGTGGTGTCGAAC +
Preference number: 6 (lower is better)
Translates to: PTRSSCTSAMWV*VGRALSKVVSN
Trigger: GTTCGACACCACCTTTGAGAGCGCGCGGCCCACGCAGACCCACATGGCGCTGGTGCAGCTGGAGCGCGTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000595670.5
ENST00000596119.5
ENST00000596298.5
ENST00000599365.5
ENST00000599394.1
ENST00000600540.5
ENST00000600938.5
CDS GCA 72 bp CCGAGTCAGCCTTTGGGATCCCGCCCTGCCCTCCTCTaGGGTCCGTTGGCGGGGTCATTGATCTGGGCGGGC +
Preference number: 6 (lower is better)
Translates to: PSQPLGSRPALL*GPLAGSLIWAG
Trigger: GCCCGCCCAGATCAATGACCCCGCCAACGGACCGCAGAGGAGGGCAGGGCGGGATCCCAAAGGCTGACTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000596119.5
ENST00000600540.5
ENST00000601069.5
CDS CCA 72 bp CGCGCTCCAGCTGCACCAGCGCCATGTGGGTCTGCGTaGGCCGCGCGCTCTCAAAGGTGGTGTCGAACTTGG +
Preference number: 6 (lower is better)
Translates to: RAPAAPAPCGSA*AARSQRWCRTW
Trigger: CCAAGTTCGACACCACCTTTGAGAGCGCGCGGCCCACGCAGACCCACATGGCGCTGGTGCAGCTGGAGCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000595670.5
ENST00000596119.5
ENST00000596298.5
ENST00000599365.5
ENST00000599394.1
ENST00000600540.5
ENST00000600938.5
CDS TCA 72 bp GCCCTGCCCTCCTCTGCGGTCCGTTGGCGGGGTCATTaGTCTGGGCGGGCCCTTAGACACTTCCGGGGAGTA +
Preference number: 6 (lower is better)
Translates to: ALPSSAVRWRGH*SGRALRHFRGV
Trigger: TACTCCCCGGAAGTGTCTAAGGGCCCGCCCAGATCAATGACCCCGCCAACGGACCGCAGAGGAGGGCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000596119.5
ENST00000600540.5
ENST00000601069.5
CDS GCA 72 bp AGCCCCACTCCCGAGTCAGCCTTTGGGATCCCGCCCTaGCCTCCTCTGCGGTCCGTTGGCGGGGTCATTGAT +
Preference number: 6 (lower is better)
Translates to: SPTPESAFGIPP*PPLRSVGGVID
Trigger: ATCAATGACCCCGCCAACGGACCGCAGAGGAGGGCAGGGCGGGATCCCAAAGGCTGACTCGGGAGTGGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000596119.5
ENST00000600540.5
ENST00000601069.5
CDS CCA 72 bp CCATGTGGGTCTGCGTGGGCCGCGCGCTCTCAAAGGTaGTGTCGAACTTGGGGGCCAGACCTCGCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: PCGSAWAARSQR*CRTWGPDLAPP
Trigger: TGGAGGAGCGAGGTCTGGCCCCCAAGTTCGACACCACCTTTGAGAGCGCGCGGCCCACGCAGACCCACATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000595670.5
ENST00000596119.5
ENST00000596298.5
ENST00000599365.5
ENST00000599394.1
ENST00000600540.5
ENST00000600938.5
CDS CCA 72 bp GGACCCTGGCTCGGTCACCTCCCGGCTGGGCAGCACTaGATAGAGGAGACACCTGGCGGAAGCCTTGGTTTC +
Preference number: 6 (lower is better)
Translates to: GPWLGHLPAGQH*IEETPGGSLGF
Trigger: GAAACCAAGGCTTCCGCCAGGTGTCTCCTCTATCCAGTGCTGCCCAGCCGGGAGGTGACCGAGCCAGGGTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000596119.5
ENST00000600540.5
ENST00000601069.5
CDS GCA 72 bp ATGCCGGCACCCGTGTGGAACACCACACTGGAAGACTaGCAGACCAGCCTCGCCAGTTCCCACACCTTCCGC +
Preference number: 6 (lower is better)
Translates to: MPAPVWNTTLED*QTSLASSHTFR
Trigger: GCGGAAGGTGTGGGAACTGGCGAGGCTGGTCTGGCAGTCTTCCAGTGTGGTGTTCCACACGGGTGCCGGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000594341.1
ENST00000595670.5
ENST00000596298.5
ENST00000597896.5
ENST00000601069.5
ENST00000601488.5
ENST00000601571.1
CDS CCA 72 bp GGGATGCCAGAGGCAGTGCTGATGCCGGCACCCGTGTaGAACACCACACTGGAAGACTGCCAGACCAGCCTC +
Preference number: 6 (lower is better)
Translates to: GMPEAVLMPAPV*NTTLEDCQTSL
Trigger: GAGGCTGGTCTGGCAGTCTTCCAGTGTGGTGTTCCACACGGGTGCCGGCATCAGCACTGCCTCTGGCATCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000305232.10
ENST00000337491.7
ENST00000594279.5
ENST00000594341.1
ENST00000595670.5
ENST00000596298.5
ENST00000597896.5
ENST00000601069.5
ENST00000601488.5
ENST00000601571.1
CDS CCA 72 bp GGTCCCGGTCGGGCAGGGAGTCCTCCCAGTCTAGGATaGTGTCCCTCAGCTCTCCCCTGCAATGAGGAAGCT +
Preference number: 6 (lower is better)
Translates to: GPGRAGSPPSLG*CPSALPCNEEA
Trigger: AGCTTCCTCATTGCAGGGGAGAGCTGAGGGACACCATCCTAGACTGGGAGGACTCCCTGCCCGACCGGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595670.5
ENST00000596119.5
ENST00000601069.5
CDS CCA 72 bp CCTCCCGGCTGGGCAGCACTGGATAGAGGAGACACCTaGCGGAAGCCTTGGTTTCCTTGTGTAGCACCCACC +
Preference number: 6 (lower is better)
Translates to: PPGWAALDRGDT*RKPWFPCVAPT
Trigger: GGTGGGTGCTACACAAGGAAACCAAGGCTTCCGCCAGGTGTCTCCTCTATCCAGTGCTGCCCAGCCGGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000596119.5
ENST00000600540.5
ENST00000601069.5
CDS CCA 72 bp AGTGTGGTAAGAGCTTGGACACCTAGGGTGGGACCCTaGCTCGGTCACCTCCCGGCTGGGCAGCACTGGATA +
Preference number: 6 (lower is better)
Translates to: SVVRAWTPRVGP*LGHLPAGQHWI
Trigger: TATCCAGTGCTGCCCAGCCGGGAGGTGACCGAGCCAGGGTCCCACCCTAGGTGTCCAAGCTCTTACCACACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000596119.5
ENST00000600540.5
ENST00000601069.5
CDS GCA 72 bp CCTCCCAGTCTAGGATGGTGTCCCTCAGCTCTCCCCTaGAATGAGGAAGCTGAGGAGAGTCCTCAGGGGCCT +
Preference number: 6 (lower is better)
Translates to: PPSLGWCPSALP*NEEAEESPQGP
Trigger: AGGCCCCTGAGGACTCTCCTCAGCTTCCTCATTGCAGGGGAGAGCTGAGGGACACCATCCTAGACTGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595670.5
ENST00000596119.5
ENST00000601069.5
CDS GCA 72 bp CTCTGGCAGCCTGGTAGGCCTTGCCTCGACTTCCCCTaGACAATCACAGACCTGAAGTCGGGGATGCCAGAG +
Preference number: 6 (lower is better)
Translates to: LWQPGRPCLDFP*TITDLKSGMPE
Trigger: CTCTGGCATCCCCGACTTCAGGTCTGTGATTGTGCAGGGGAAGTCGAGGCAAGGCCTACCAGGCTGCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594341.1
CDS CCA 72 bp GACACTTCCGGGGAGTATCACAGTGTGGTAAGAGCTTaGACACCTAGGGTGGGACCCTGGCTCGGTCACCTC +
Preference number: 6 (lower is better)
Translates to: DTSGEYHSVVRA*TPRVGPWLGHL
Trigger: GAGGTGACCGAGCCAGGGTCCCACCCTAGGTGTCCAAGCTCTTACCACACTGTGATACTCCCCGGAAGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000596119.5
ENST00000600540.5
ENST00000601069.5
CDS CCA 72 bp GCAGCACTGGATAGAGGAGACACCTGGCGGAAGCCTTaGTTTCCTTGTGTAGCACCCACCCAGAGCCATGAG +
Preference number: 6 (lower is better)
Translates to: AALDRGDTWRKP*FPCVAPTQSHE
Trigger: CTCATGGCTCTGGGTGGGTGCTACACAAGGAAACCAAGGCTTCCGCCAGGTGTCTCCTCTATCCAGTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000596119.5
ENST00000600540.5
ENST00000601069.5
CDS GCA 72 bp GGCACATTCTTCCACAAACATGTTCCCGTGGAGCTCTaGCAGTTTGTCCCTGAAGTCGGGGATGCCAGAGGC +
Preference number: 6 (lower is better)
Translates to: GTFFHKHVPVEL*QFVPEVGDARG
Trigger: GCCTCTGGCATCCCCGACTTCAGGGACAAACTGGCAGAGCTCCACGGGAACATGTTTGTGGAAGAATGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000597896.5
ENST00000601069.5
ENST00000601488.5
ENST00000601571.1
CDS CCA 72 bp AGGGAGTACCCAGGACACATCCAGGAGGAAAGCAGATaGATGTGTTCTCATTCCCAGATGTGTGTGGCTCGC +
Preference number: 6 (lower is better)
Translates to: REYPGHIQEESR*MCSHSQMCVAR
Trigger: GCGAGCCACACACATCTGGGAATGAGAACACATCCATCTGCTTTCCTCCTGGATGTGTCCTGGGTACTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594341.1
CDS CCA 72 bp TTACACTTGGCACATTCTTCCACAAACATGTTCCCGTaGAGCTCTGCCAGTTTGTCCCTGAAGTCGGGGATG +
Preference number: 6 (lower is better)
Translates to: LHLAHSSTNMFP*SSASLSLKSGM
Trigger: CATCCCCGACTTCAGGGACAAACTGGCAGAGCTCCACGGGAACATGTTTGTGGAAGAATGTGCCAAGTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000597896.5
ENST00000601069.5
ENST00000601488.5
ENST00000601571.1