RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SIRT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000068903

Ensembl transcript IDs: ENST00000249396.12, ENST00000358931.9, ENST00000381766.8, ENST00000392081.6, ENST00000407552.5, ENST00000414941.5, ENST00000420440.5, ENST00000423526.5, ENST00000437828.5, ENST00000443898.5, ENST00000447739.1, ENST00000451193.5, ENST00000462654.5, ENST00000476771.5, ENST00000479290.5, ENST00000491960.5, ENST00000496069.1, ENST00000613542.4, ENST00000634328.1, ENST00000634533.2, ENST00000634572.1, ENST00000634637.1, ENST00000634707.1, ENST00000634746.1, ENST00000634761.1, ENST00000634932.1, ENST00000635078.1, ENST00000635086.1, ENST00000635192.1, ENST00000635209.1, ENST00000635261.1, ENST00000635338.1, ENST00000635478.1, ENST00000635486.1, ENST00000635627.1, ENST00000635694.1

Found 678 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGGCTCAGCTGTCCCTaGGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTGTCACTGGGG +
Preference number: 1 (lower is better)
Translates to: CWLRGGQARLGLSCP*GARHPAWEMQLSLG
Trigger: CCCCAGTGACAGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCCCAACCGGGCCTGGCCCCCTCTTAACCAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
3UTR CCA 90 bp AAGGCAGAGACTCGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTaGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGG +
Preference number: 1 (lower is better)
Translates to: KAETREPSRLRLPLR*VWVIFRGPHPHWGR
Trigger: CCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCGAGTCTCTGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR CCA 90 bp GTCCCTGAGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTGTCACTaGGGTTTCTCCCTCTCTGTTGTCCTGGCCTCGTCCTTGGCAGGT +
Preference number: 1 (lower is better)
Translates to: VPEELGIPPGRCSCH*GFSLSVVLASSLAG
Trigger: ACCTGCCAAGGACGAGGCCAGGACAACAGAGAGGGAGAAACCCCAGTGACAGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
3UTR CCA 90 bp GAGACTCGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTaGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTAGGT +
Preference number: 1 (lower is better)
Translates to: ETREPSRLRLPLRWV*VIFRGPHPHWGRLG
Trigger: ACCTAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCGAGTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR CCA 90 bp CCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTaGGGTAGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGGGGG +
Preference number: 1 (lower is better)
Translates to: PLRWVWVIFRGPHPH*GRLGMVYLATGPRG
Trigger: CCCCCGGGGGCCTGTGGCTAAGTAAACCATACCTAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR TCA 90 bp TCTCTTTCATCCAGCTTAGCGGGTATTCGTGCCGGCAGCTGGCGCTaGCGCAGTGTGATGTGTAGAAGGTGCCGTGCGCCTCCACCAAGT +
Preference number: 1 (lower is better)
Translates to: SLSSSLAGIRAGSWR*RSVMCRRCRAPPPS
Trigger: ACTTGGTGGAGGCGCACGGCACCTTCTACACATCACACTGCGTCAGCGCCAGCTGCCGGCACGAATACCCGCTAAGCTGGATGAAAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
3UTR CCA 90 bp GGACACAAGGAACAAATGCTTTGTAGCCACTGCCTGTGTTGTCTTTaGGGCCTGCCCAGGCTAAAAGATGGCTGCAGACAGCTGCTCGCC +
Preference number: 1 (lower is better)
Translates to: GHKEQMLCSHCLCCL*GLPRLKDGCRQLLA
Trigger: GGCGAGCAGCTGTCTGCAGCCATCTTTTAGCCTGGGCAGGCCCCAAAGACAACACAGGCAGTGGCTACAAAGCATTTGTTCCTTGTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423526.5
ENST00000634761.1
3UTR CCA 90 bp CTGGGTAGGGAAGATGGTACTTCTCTAGGTTGTCATAGAGGCCGGTaGATGGAGAGCGAAAGTCGGGGATGCCTGCGGATGTGGAGATTC +
Preference number: 1 (lower is better)
Translates to: LGREDGTSLGCHRGR*MESESRGCLRMWRF
Trigger: GAATCTCCACATCCGCAGGCATCCCCGACTTTCGCTCTCCATCCACCGGCCTCTATGACAACCTAGAGAAGTACCATCTTCCCTACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000423526.5
ENST00000443898.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
ENST00000635694.1
3UTR CCA 90 bp AAAAGACGATATCAGGCTTCACCAGGCTCTGACAGTCTTCACACTTaGGCGTCACCTCAGAGAAGATCTTCTCTTTCATCCAGCTTAGCG +
Preference number: 1 (lower is better)
Translates to: KRRYQASPGSDSLHT*ASPQRRSSLSSSLA
Trigger: CGCTAAGCTGGATGAAAGAGAAGATCTTCTCTGAGGTGACGCCCAAGTGTGAAGACTGTCAGAGCCTGGTGAAGCCTGATATCGTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420440.5
ENST00000635486.1
3UTR-3UTR CCA 90 bp TGGGGCTCAGCTGTCCCTGAGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTGTACCCCCGCCCCCGACTaGGCATCTATGCTGGCGTGC +
Preference number: 2 (lower is better)
Translates to: WGSAVPEELGIPPGRCSCTPAPD*ASMLAC
Trigger: GCACGCCAGCATAGATGCCCAGTCGGGGGCGGGGGT...ACAGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
3UTR-3UTR TCA 90 bp AAGTGGGTCCCACGTGAAGGGGGCCCACCACCCACTTTGGGAGCTGAAGGCAGAGGGCTCAGCTGTCCCTaGGGAGCTCGGCATCCCGCC +
Preference number: 2 (lower is better)
Translates to: KWVPREGGPPPTLGAEGRGLSCP*GARHPA
Trigger: GGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCC...TCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCCCCCTTCACGTGGGACCCACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR TCA 90 bp TCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGGGGCTCAGCTGTCCCTaGGGAGCTCGGCATCCCGCC +
Preference number: 2 (lower is better)
Translates to: SELPRQELLVKRGPGPVGGLSCP*GARHPA
Trigger: GGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCC...CCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR GCA 90 bp TGGGGCTCAGCTGTCCCTGAGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTGTCCGACTGGGCATCTATaGTGGCGTGCTCCCTCCGGA +
Preference number: 2 (lower is better)
Translates to: WGSAVPEELGIPPGRCSCPTGHL*WRAPSG
Trigger: TCCGGAGGGAGCACGCCAGCATAGATGCCCAGTCGG...ACAGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
3UTR CAA 90 bp TCCCGCCTGGGAGATGCAGCTGTCACTGGGGTTTCTCCCTCTCTGTaGTCCTGGCCTCGTCCTTGGCAGGTGGCGGGGACTTCTTGGGGG +
Preference number: 2 (lower is better)
Translates to: SRLGDAAVTGVSPSL*SWPRPWQVAGTSWG
Trigger: CCCCCAAGAAGTCCCCGCCACCTGCCAAGGACGAGGCCAGGACAACAGAGAGGGAGAAACCCCAGTGACAGCTGCATCTCCCAGGCGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
3UTR-3UTR TCA 90 bp CAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGGCTCAGCTGTCCCTaGGGAGCTCGGCATCCCGCC +
Preference number: 2 (lower is better)
Translates to: QTPPTLGVGYIQRPTPTLGLSCP*GARHPA
Trigger: GGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCC...CAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR TCA 90 bp TGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGCTCAGCTGTCCCTaGGGAGCTCGGCATCCCGCC +
Preference number: 2 (lower is better)
Translates to: CSELPRQELLVKRGPGPVGLSCP*GARHPA
Trigger: GGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCC...AACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR TCA 90 bp CACCCACACTGGGGTAGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGGGGGGAAGTGGGTCCCACGTaGAGGGGGCCCACCACCCAC +
Preference number: 2 (lower is better)
Translates to: HPHWGRLGMVYLATGPRGEVGPT*RGPTTH
Trigger: GTGGGTGGTGGGCCCCCTTCACGTGGGACCCACTTC...CCCCCGGGGGCCTGTGGCTAAGTAAACCATACCTAACCTACCCCAGTGTGGGTG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR CCA 90 bp AGTGGGTCCCACGTGAAGGGGGCCCACCACCCACTTTGGGAGCTGAAGGCAGAGGTAGCCCTGGCCCCGTaGGGGCAGTTAGAGATGAGG +
Preference number: 2 (lower is better)
Translates to: SGSHVKGAHHPLWELKAEVALAP*GQLEMR
Trigger: CCTCATCTCTAACTGCCCCCACGGGGCCAGGGCTAC...CTCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCCCCCTTCACGTGGGACCCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR GCA 90 bp GCAGAGACTCGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTTCCCCAGACAAGAACTaGTGGTTAAGAGGGGGCCAG +
Preference number: 2 (lower is better)
Translates to: AETREPSRLRLPLRWVWVSPDKN*WLRGGQ
Trigger: CTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGA...AACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCGAGTCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR GCA 90 bp GCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCGCATCTATGCTGGCGTaGTCCCTCCGGACAAGGTCC +
Preference number: 2 (lower is better)
Translates to: ALPAQTPPTLGVGYIQRPASMLA*SLRTRS
Trigger: GGACCTTGTCCGGAGGGAGCACGCCAGCATAGATGC...GGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
3UTR-3UTR GCA 90 bp AAGTGGGTCCCACGTGAAGGGGGCCCACCACCCACTTTGGGAGCTGAAGGCAGACCGACTGGGCATCTATaGTGGCGTGCTCCCTCCGGA +
Preference number: 2 (lower is better)
Translates to: KWVPREGGPPPTLGAEGRPTGHL*WRAPSG
Trigger: TCCGGAGGGAGCACGCCAGCATAGATGCCCAGTCGG...TCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCCCCCTTCACGTGGGACCCACTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
3UTR-3UTR GCA 90 bp AGAAGGTGCCGTGCGCCTCCACCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCTTAGCGGGTATTCGTaGCGGCAGCTGGCGCTGACG +
Preference number: 2 (lower is better)
Translates to: RRCRAPPPSPPVPARLFALSGYS*RQLALT
Trigger: CGTCAGCGCCAGCTGCCGGCACGAATACCCGCTAAG...AGCGAATAGCCGGGCTGGAACAGGAGGACTTGGTGGAGGCGCACGGCACCTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
3UTR-3UTR CCA 90 bp GTCCCTGAGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTGTCACTGGGGTTTCGAGATTTGCTGGGGTTaGGGGCCAGGGTTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: VPEELGIPPGRCSCHWGFEICWG*GPGLLG
Trigger: TCCCAGCAACCCTGGCCCCCAACCCCAGCAAATCTC...GAAACCCCAGTGACAGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
3UTR-3UTR CCA 90 bp GCAGAGACTCGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTGTGTTAGAGATTTGCTaGGGTTGGGGGCCAGGGTTG +
Preference number: 2 (lower is better)
Translates to: AETREPSRLRLPLRWVWVVLEIC*GWGPGL
Trigger: CAACCCTGGCCCCCAACCCCAGCAAATCTCTAACAC...AACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCGAGTCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR CCA 90 bp TGGGGCTCAGCTGTCCCTGAGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTGTACTGGGCATCTATGCTaGCGTGCTCCCTCCGGACAA +
Preference number: 2 (lower is better)
Translates to: WGSAVPEELGIPPGRCSCTGHLC*RAPSGQ
Trigger: TTGTCCGGAGGGAGCACGCCAGCATAGATGCCCAGT...ACAGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
3UTR-3UTR CCA 90 bp CAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGACCCCCGCCCCCGACTaGGCATCTATGCTGGCGTGC +
Preference number: 2 (lower is better)
Translates to: QTPPTLGVGYIQRPTPTLTPAPD*ASMLAC
Trigger: GCACGCCAGCATAGATGCCCAGTCGGGGGCGGGGGT...CAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
3UTR-3UTR CCA 90 bp CGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGACTCGTCCTTGGCAGGTaGCGGGGACTTCTTGGGGGA +
Preference number: 2 (lower is better)
Translates to: REPSRLRLPLRWVWVIFRLVLGR*RGLLGG
Trigger: TCCCCCAAGAAGTCCCCGCCACCTGCCAAGGACGAG...TCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
3UTR-3UTR CCA 90 bp TCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGTCCTGGCCTCGTCCTTaGCAGGTGGCGGGGACTTCT +
Preference number: 2 (lower is better)
Translates to: SELPRQELLVKRGPGPVGSWPRP*QVAGTS
Trigger: AGAAGTCCCCGCCACCTGCCAAGGACGAGGCCAGGA...CCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
3UTR-3UTR CCA 90 bp CGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGCTCGGCATCCCGCCTaGGAGATGCAGCTGTCACTG +
Preference number: 2 (lower is better)
Translates to: REPSRLRLPLRWVWVIFRARHPA*EMQLSL
Trigger: CAGTGACAGCTGCATCTCCCAGGCGGGATGCCGAGC...TCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
3UTR-3UTR TCA 90 bp CTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTAGGGCTCAGCTGTCCCTaGGGAGCTCGGCATCCCGCC +
Preference number: 2 (lower is better)
Translates to: LRWVWVIFRGPHPHWGRLGLSCP*GARHPA
Trigger: GGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCC...TAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR GCA 90 bp GTCCCTGAGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTGTCACTGGGGTTTCGAGGTGTTAGAGATTTaGTGGGGTTGGGGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: VPEELGIPPGRCSCHWGFEVLEI*WGWGPG
Trigger: CCCTGGCCCCCAACCCCAGCAAATCTCTAACACCTC...GAAACCCCAGTGACAGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
3UTR-3UTR GCA 90 bp ATCCAGCTTAGCGGGTATTCGTGCCGGCAGCTGGCGCTGACGCAGTGTGATGTGCTTAGCGGGTATTCGTaGCGGCAGCTGGCGCTGACG +
Preference number: 2 (lower is better)
Translates to: IQLSGYSCRQLALTQCDVLSGYS*RQLALT
Trigger: CGTCAGCGCCAGCTGCCGGCACGAATACCCGCTAAG...CACATCACACTGCGTCAGCGCCAGCTGCCGGCACGAATACCCGCTAAGCTGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
3UTR-3UTR CCA 90 bp CGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGAGATTTGCTGGGGTTaGGGGCCAGGGTTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: REPSRLRLPLRWVWVIFREICWG*GPGLLG
Trigger: TCCCAGCAACCCTGGCCCCCAACCCCAGCAAATCTC...TCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR CCA 90 bp CACCCACACTGGGGTAGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGGGGGGTAGCCCTGGCCCCGTaGGGGCAGTTAGAGATGAGG +
Preference number: 2 (lower is better)
Translates to: HPHWGRLGMVYLATGPRGVALAP*GQLEMR
Trigger: CCTCATCTCTAACTGCCCCCACGGGGCCAGGGCTAC...CCCCCGGGGGCCTGTGGCTAAGTAAACCATACCTAACCTACCCCAGTGTGGGTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR CCA 90 bp GTCCCTGAGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTGTCACTGGGGTTTCACTGGGCATCTATGCTaGCGTGCTCCCTCCGGACAA +
Preference number: 2 (lower is better)
Translates to: VPEELGIPPGRCSCHWGFTGHLC*RAPSGQ
Trigger: TTGTCCGGAGGGAGCACGCCAGCATAGATGCCCAGT...GAAACCCCAGTGACAGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
3UTR-3UTR GCA 90 bp AAGTGGGTCCCACGTGAAGGGGGCCCACCACCCACTTTGGGAGCTGAAGGCAGAGAGGTGTTAGAGATTTaGTGGGGTTGGGGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: KWVPREGGPPPTLGAEGREVLEI*WGWGPG
Trigger: CCCTGGCCCCCAACCCCAGCAAATCTCTAACACCTC...TCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCCCCCTTCACGTGGGACCCACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR CCA 90 bp CCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGGCTCAGCTGTCCAGACAAGAACTGCTaGTTAAGAGGGGGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: PDKNCWLRGGQARLGLSCPDKNC*LRGGQA
Trigger: GGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGG...ACAGCTGAGCCCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR CCA 90 bp AAGTGGGTCCCACGTGAAGGGGGCCCACCACCCACTTTGGGAGCTGAAGGCAGACCAGACAAGAACTGCTaGTTAAGAGGGGGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: KWVPREGGPPPTLGAEGRPDKNC*LRGGQA
Trigger: GGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGG...TCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCCCCCTTCACGTGGGACCCACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR CCA 90 bp AGTGGGTCCCACGTGAAGGGGGCCCACCACCCACTTTGGGAGCTGAAGGCAGAGCCCCTACGCTGGGTGTaGGTTATATTCAGAGGCCCA +
Preference number: 2 (lower is better)
Translates to: SGSHVKGAHHPLWELKAEPLRWV*VIFRGP
Trigger: TGGGCCTCTGAATATAACCCACACCCAGCGTAGGGG...CTCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCCCCCTTCACGTGGGACCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR CCA 90 bp ACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGGATCCAGCATGGGAAGTaGGTCCCACGTGAAGGGGGC +
Preference number: 2 (lower is better)
Translates to: TPPTLGVGYIQRPTPTLGIQHGK*VPREGG
Trigger: GCCCCCTTCACGTGGGACCCACTTCCCATGCTGGAT...CCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR TCA 90 bp CTAGGTTGTCATAGAGGCCGGTGGATGGAGAGCGAAAGTCGGGGATGCCTGCGGCTCCCACCAAACAGATaGCTCTGCGACAGCGTTCGC +
Preference number: 2 (lower is better)
Translates to: LGCHRGRWMESESRGCLRLPPNR*LCDSVR
Trigger: GCGAACGCTGTCGCAGAGTCATCTGTTTGGTGGGAG...CCGCAGGCATCCCCGACTTTCGCTCTCCATCCACCGGCCTCTATGACAACCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
3UTR-3UTR GCA 90 bp GGGCCCGAAGCTCCCTGTCCTGGAAGAGTTAAAAGTTCTGGGGTAGCCCTGGCCGAGGTGTTAGAGATTTaGTGGGGTTGGGGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: GPEAPCPGRVKSSGVALAEVLEI*WGWGPG
Trigger: CCCTGGCCCCCAACCCCAGCAAATCTCTAACACCTC...GGCCAGGGCTACCCCAGAACTTTTAACTCTTCCAGGACAGGGAGCTTCGGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR GCA 90 bp CCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTATGTTCTGCGCTTAGCGGGTATTCGTaGCGGCAGCTGGCGCTGACG +
Preference number: 2 (lower is better)
Translates to: PSPPVPARLFAPGYLCSALSGYS*RQLALT
Trigger: CGTCAGCGCCAGCTGCCGGCACGAATACCCGCTAAG...CGCAGAACATAGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
3UTR-3UTR GCA 90 bp GCGAAAGTCGGGGATGCCTGCGGATGTGGAGATTCCAGCTCCCACCAAACAGATCCGGGAGGCGGAGGTTaGAGTGAGCCGAGATCATGC +
Preference number: 2 (lower is better)
Translates to: AKVGDACGCGDSSSHQTDPGGGG*SEPRSC
Trigger: GCATGATCTCGGCTCACTGCAACCTCCGCCTCCCGG...ATCTGTTTGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCCCCGACTTTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451193.5
ENST00000635627.1
3UTR-3UTR CCA 90 bp CCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCATCCTTAGCCCAGGAGTaGTTAGAGACAGTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: PSRLRLPLRWVWVIFRGPSLAQE*LETVGL
Trigger: CAGCCCCACTGTCTCTAACCACTCCTGGGCTAAGGA...TGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR CCA 90 bp AAGTGGGTCCCACGTGAAGGGGGCCCACCACCCACTTTGGGAGCTGAAGGCAGAGGCCCACACCCACACTaGGGTAGGTTAGGTATGGTT +
Preference number: 2 (lower is better)
Translates to: KWVPREGGPPPTLGAEGRGPHPH*GRLGMV
Trigger: AACCATACCTAACCTACCCCAGTGTGGGTGTGGGCC...TCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCCCCCTTCACGTGGGACCCACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR CCA 90 bp CCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCACCCCTACGCTGGGTGTaGGTTATATTCAGAGGCCCA +
Preference number: 2 (lower is better)
Translates to: PSRLRLPLRWVWVIFRGPPLRWV*VIFRGP
Trigger: TGGGCCTCTGAATATAACCCACACCCAGCGTAGGGG...TGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR CCA 90 bp AGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGGGGGCAGGAGACAGAGTGGGTGGCGGGGACTTCTTaGGGGAAGCTGAAGTGCTGG +
Preference number: 2 (lower is better)
Translates to: RLGMVYLATGPRGQETEWVAGTS*GKLKCW
Trigger: CCAGCACTTCAGCTTCCCCCAAGAAGTCCCCGCCAC...CCACTCTGTCTCCTGCCCCCGGGGGCCTGTGGCTAAGTAAACCATACCTAACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
3UTR-3UTR CCA 90 bp AGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGGGGGCAGGAGACAGAGTGGCCCTCTCTGTTGTCCTaGCCTCGTCCTTGGCAGGTG +
Preference number: 2 (lower is better)
Translates to: RLGMVYLATGPRGQETEWPSLLS*PRPWQV
Trigger: CACCTGCCAAGGACGAGGCCAGGACAACAGAGAGGG...CCACTCTGTCTCCTGCCCCCGGGGGCCTGTGGCTAAGTAAACCATACCTAACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
3UTR-3UTR TCA 90 bp AAGTGGGTCCCACGTGAAGGGGGCCCACCACCCACTTTGGGAGCTGAAGGCAGAGATTGGGGGATGTTCTaGGCTCCCCAGACAAGAACT +
Preference number: 2 (lower is better)
Translates to: KWVPREGGPPPTLGAEGRDWGMF*APQTRT
Trigger: AGTTCTTGTCTGGGGAGCTCAGAACATCCCCCAATC...TCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCCCCCTTCACGTGGGACCCACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR TCA 90 bp CGCAGTGTGATGTGTAGAAGGTGCCGTGCGCCTCCACCAAGTCCTCCTGTTCCAGGCTTCACCAGGCTCTaGCAGTCTTCACACTTGGGC +
Preference number: 2 (lower is better)
Translates to: RSVMCRRCRAPPPSPPVPGFTRL*QSSHLG
Trigger: GCCCAAGTGTGAAGACTGTCAGAGCCTGGTGAAGCC...TGGAACAGGAGGACTTGGTGGAGGCGCACGGCACCTTCTACACATCACACTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
3UTR-3UTR GCA 90 bp CACCCACACTGGGGTAGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGGGGGTCCCCAGACAAGAACTaGTGGTTAAGAGGGGGCCAG +
Preference number: 2 (lower is better)
Translates to: HPHWGRLGMVYLATGPRGSPDKN*WLRGGQ
Trigger: CTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGA...CCCCCGGGGGCCTGTGGCTAAGTAAACCATACCTAACCTACCCCAGTGTGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR GCA 90 bp AGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTATGTTCTGCGTGTCGACAGCGTTCGCTCTaGATGTACCGGGCCACCCCT +
Preference number: 2 (lower is better)
Translates to: SPPVPARLFAPGYLCSACRQRSL*MYRATP
Trigger: AGGGGTGGCCCGGTACATGCAGAGCGAACGCTGTCG...ACACGCAGAACATAGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
3UTR-3UTR CCA 90 bp CACCCACACTGGGGTAGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGGGGGGTGTTAGAGATTTGCTaGGGTTGGGGGCCAGGGTTG +
Preference number: 2 (lower is better)
Translates to: HPHWGRLGMVYLATGPRGVLEIC*GWGPGL
Trigger: CAACCCTGGCCCCCAACCCCAGCAAATCTCTAACAC...CCCCCGGGGGCCTGTGGCTAAGTAAACCATACCTAACCTACCCCAGTGTGGGTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR CCA 90 bp ATAAGCAATGTCTTCTGCCCATCCAGCATGGGAAGTGGGTCCCACGTGAAGGGGGTAGCCCTGGCCCCGTaGGGGCAGTTAGAGATGAGG +
Preference number: 2 (lower is better)
Translates to: ISNVFCPSSMGSGSHVKGVALAP*GQLEMR
Trigger: CCTCATCTCTAACTGCCCCCACGGGGCCAGGGCTAC...CCCCTTCACGTGGGACCCACTTCCCATGCTGGATGGGCAGAAGACATTGCTTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR CCA 90 bp GCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCAGATGCAGCTGTCACTaGGGTTTCTCCCTCTCTGTT +
Preference number: 2 (lower is better)
Translates to: ALPAQTPPTLGVGYIQRPRCSCH*GFSLSV
Trigger: AACAGAGAGGGAGAAACCCCAGTGACAGCTGCATCT...GGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
3UTR-3UTR CCA 90 bp TGCGCCTCCACCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTGTAGTGACAGATGGTTaGCCCCAGGGAACCGTCACA +
Preference number: 2 (lower is better)
Translates to: CASTKSSCSSPAIRSRVSVVTDG*PQGTVT
Trigger: TGTGACGGTTCCCTGGGGCCAACCATCTGTCACTAC...AGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGGTGGAGGCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420440.5
ENST00000635486.1
3UTR-3UTR TCA 90 bp TGCGCCTCCACCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTCCTTCAGCAGGCGCATaGAGTAGTGACAGATGGTTG +
Preference number: 2 (lower is better)
Translates to: CASTKSSCSSPAIRSRVSPSAGA*SSDRWL
Trigger: CAACCATCTGTCACTACTTCATGCGCCTGCTGAAGG...AGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGGTGGAGGCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
3UTR-3UTR TCA 90 bp CAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTATGTTCTGCGTGGCGCTGACGCAGTGTaGTGTGTAGAAGGTGCCGTG +
Preference number: 2 (lower is better)
Translates to: QVLLFQPGYSLQGIYVLRGADAV*CVEGAV
Trigger: CACGGCACCTTCTACACATCACACTGCGTCAGCGCC...ACGCAGAACATAGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
3UTR-3UTR GCA 90 bp ATAAGCAATGTCTTCTGCCCATCCAGCATGGGAAGTGGGTCCCACGTGAAGGGGGCATCTATGCTGGCGTaGTCCCTCCGGACAAGGTCC +
Preference number: 2 (lower is better)
Translates to: ISNVFCPSSMGSGSHVKGASMLA*SLRTRS
Trigger: GGACCTTGTCCGGAGGGAGCACGCCAGCATAGATGC...CCCCTTCACGTGGGACCCACTTCCCATGCTGGATGGGCAGAAGACATTGCTTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
3UTR-3UTR GCA 90 bp CAGCCCGGCTATTCGCTCCAGGGTATCTATGTTCTGCGTGTAGCAGCGCAGGAGGTGATGTGTAGAAGGTaGCGTGCGCCTCCACCAAGT +
Preference number: 2 (lower is better)
Translates to: QPGYSLQGIYVLRVAAQEVMCRR*RAPPPS
Trigger: ACTTGGTGGAGGCGCACGGCACCTTCTACACATCAC...CTCCTGCGCTGCTACACGCAGAACATAGATACCCTGGAGCGAATAGCCGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
3UTR-3UTR CCA 90 bp GCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCTGCCTGTTTAAGCCTTaGCCTCTAGGAGGTGTTAGA +
Preference number: 2 (lower is better)
Translates to: ALPAQTPPTLGVGYIQRPCLFKP*PLGGVR
Trigger: TCTAACACCTCCTAGAGGCCAAGGCTTAAACAGGCA...GGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR CCA 90 bp TGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTAGGTATGTCCTGGCCTCGTCCTTaGCAGGTGGCGGGGACTTCT +
Preference number: 2 (lower is better)
Translates to: WVWVIFRGPHPHWGRLGMSWPRP*QVAGTS
Trigger: AGAAGTCCCCGCCACCTGCCAAGGACGAGGCCAGGA...CATACCTAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
3UTR-3UTR CCA 90 bp CGCAGTGTGATGTGTAGAAGGTGCCGTGCGCCTCCACCAAGTCCTCCTGTTCCAATAGAGGCCGGTGGATaGAGAGCGAAAGTCGGGGAT +
Preference number: 2 (lower is better)
Translates to: RSVMCRRCRAPPPSPPVPIEAGG*RAKVGD
Trigger: ATCCCCGACTTTCGCTCTCCATCCACCGGCCTCTAT...TGGAACAGGAGGACTTGGTGGAGGCGCACGGCACCTTCTACACATCACACTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
3UTR-3UTR TCA 90 bp AGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGGGGGCAGGAGACAGAGTGGGATTGGGGGATGTTCTaGGCTCCCCAGACAAGAACT +
Preference number: 2 (lower is better)
Translates to: RLGMVYLATGPRGQETEWDWGMF*APQTRT
Trigger: AGTTCTTGTCTGGGGAGCTCAGAACATCCCCCAATC...CCACTCTGTCTCCTGCCCCCGGGGGCCTGTGGCTAAGTAAACCATACCTAACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR GCA 90 bp GTGGGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGGAGGTGTTAGAGATTTaGTGGGGTTGGGGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: VGAVRDEGGYSLAQEWLEEVLEI*WGWGPG
Trigger: CCCTGGCCCCCAACCCCAGCAAATCTCTAACACCTC...CTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR GCA 90 bp CCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTATGTTCTGCGGTGATGTGTAGAAGGTaGCGTGCGCCTCCACCAAGT +
Preference number: 2 (lower is better)
Translates to: PSPPVPARLFAPGYLCSAVMCRR*RAPPPS
Trigger: ACTTGGTGGAGGCGCACGGCACCTTCTACACATCAC...CGCAGAACATAGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
3UTR-3UTR CCA 90 bp GTGGGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGCCAGACAAGAACTGCTaGTTAAGAGGGGGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: VGAVRDEGGYSLAQEWLEPDKNC*LRGGQA
Trigger: GGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGG...CTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR CCA 90 bp CCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCATGCCTGTTTAAGCCTTaGCCTCTAGGAGGTGTTAGA +
Preference number: 2 (lower is better)
Translates to: PSRLRLPLRWVWVIFRGPCLFKP*PLGGVR
Trigger: TCTAACACCTCCTAGAGGCCAAGGCTTAAACAGGCA...TGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR CCA 90 bp ACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGGAGACTCCCCCTACGCTaGGTGTGGGTTATATTCAGA +
Preference number: 2 (lower is better)
Translates to: TPPTLGVGYIQRPTPTLGRLPLR*VWVIFR
Trigger: TCTGAATATAACCCACACCCAGCGTAGGGGGAGTCT...CCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR CCA 90 bp CTTAGCCCAGGAGTGGTTAGAGACAGTGGGGCTGGTAGAGATGCCTGTTTAAGCCCCTCTCTGTTGTCCTaGCCTCGTCCTTGGCAGGTG +
Preference number: 2 (lower is better)
Translates to: LSPGVVRDSGAGRDACLSPSLLS*PRPWQV
Trigger: CACCTGCCAAGGACGAGGCCAGGACAACAGAGAGGG...GCTTAAACAGGCATCTCTACCAGCCCCACTGTCTCTAACCACTCCTGGGCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
3UTR-3UTR CCA 90 bp ATAGAGGCCGGTGGATGGAGAGCGAAAGTCGGGGATGCCTGCGGATGTGGAGATTGCCTGTGTTGTCTTTaGGGCCTGCCCAGGCTAAAA +
Preference number: 2 (lower is better)
Translates to: IEAGGWRAKVGDACGCGDCLCCL*GLPRLK
Trigger: TTTTAGCCTGGGCAGGCCCCAAAGACAACACAGGCA...ATCTCCACATCCGCAGGCATCCCCGACTTTCGCTCTCCATCCACCGGCCTCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423526.5
ENST00000634761.1
3UTR-3UTR CCA 90 bp CAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTATGTTCTGCGTGGATGCCTGCGGATGTaGAGATTCCAGCTCCCACCA +
Preference number: 2 (lower is better)
Translates to: QVLLFQPGYSLQGIYVLRGCLRM*RFQLPP
Trigger: TGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCC...ACGCAGAACATAGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
3UTR-3UTR TCA 90 bp AGCGAAAGTCGGGGATGCCTGCGGATGTGGAGATTCCAGCTCCCACCAAACAGACCTTCAGCAGGCGCATaGAGTAGTGACAGATGGTTG +
Preference number: 2 (lower is better)
Translates to: SESRGCLRMWRFQLPPNRPSAGA*SSDRWL
Trigger: CAACCATCTGTCACTACTTCATGCGCCTGCTGAAGG...TCTGTTTGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCCCCGACTTTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
3UTR-3UTR GCA 90 bp ATAAGCAATGTCTTCTGCCCATCCAGCATGGGAAGTGGGTCCCACGTGAAGGGGTCCCCAGACAAGAACTaGTGGTTAAGAGGGGGCCAG +
Preference number: 2 (lower is better)
Translates to: ISNVFCPSSMGSGSHVKGSPDKN*WLRGGQ
Trigger: CTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGA...CCCCTTCACGTGGGACCCACTTCCCATGCTGGATGGGCAGAAGACATTGCTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR GCA 90 bp CCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCAATAAGCAATGTCTTCTaGCCATCCAGCATGGGAAGT +
Preference number: 2 (lower is better)
Translates to: PSRLRLPLRWVWVIFRGPISNVF*PSSMGS
Trigger: ACTTCCCATGCTGGATGGGCAGAAGACATTGCTTAT...TGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR GCA 90 bp GGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGACAATCCCGCCTGGGAGATaGAGCTGTCACTGGGGTTTC +
Preference number: 2 (lower is better)
Translates to: GAVRDEGGYSLAQEWLETIPPGR*SCHWGF
Trigger: GAAACCCCAGTGACAGCTGCATCTCCCAGGCGGGAT...TGTCTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
3UTR-3UTR CCA 90 bp CTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTAGTGTTAGAGATTTGCTaGGGTTGGGGGCCAGGGTTG +
Preference number: 2 (lower is better)
Translates to: LRWVWVIFRGPHPHWGRLVLEIC*GWGPGL
Trigger: CAACCCTGGCCCCCAACCCCAGCAAATCTCTAACAC...TAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR CCA 90 bp ATAAGCAATGTCTTCTGCCCATCCAGCATGGGAAGTGGGTCCCACGTGAAGGGGGGCCCACACCCACACTaGGGTAGGTTAGGTATGGTT +
Preference number: 2 (lower is better)
Translates to: ISNVFCPSSMGSGSHVKGGPHPH*GRLGMV
Trigger: AACCATACCTAACCTACCCCAGTGTGGGTGTGGGCC...CCCCTTCACGTGGGACCCACTTCCCATGCTGGATGGGCAGAAGACATTGCTTAT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR CCA 90 bp ATAAGCAATGTCTTCTGCCCATCCAGCATGGGAAGTGGGTCCCACGTGAAGGGGCCCCTACGCTGGGTGTaGGTTATATTCAGAGGCCCA +
Preference number: 2 (lower is better)
Translates to: ISNVFCPSSMGSGSHVKGPLRWV*VIFRGP
Trigger: TGGGCCTCTGAATATAACCCACACCCAGCGTAGGGG...CCCCTTCACGTGGGACCCACTTCCCATGCTGGATGGGCAGAAGACATTGCTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR CCA 90 bp GGCCCACACCCACACTGGGGTAGGTTAGGTATGGTTTACTTAGCCACAGGCCCCAGACTCCCCCTACGCTaGGTGTGGGTTATATTCAGA +
Preference number: 2 (lower is better)
Translates to: GPHPHWGRLGMVYLATGPRLPLR*VWVIFR
Trigger: TCTGAATATAACCCACACCCAGCGTAGGGGGAGTCT...GGGGCCTGTGGCTAAGTAAACCATACCTAACCTACCCCAGTGTGGGTGTGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR CCA 90 bp AGCGAAAGTCGGGGATGCCTGCGGATGTGGAGATTCCAGCTCCCACCAAACAGATGCCTGTGTTGTCTTTaGGGCCTGCCCAGGCTAAAA +
Preference number: 2 (lower is better)
Translates to: SESRGCLRMWRFQLPPNRCLCCL*GLPRLK
Trigger: TTTTAGCCTGGGCAGGCCCCAAAGACAACACAGGCA...TCTGTTTGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCCCCGACTTTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423526.5
ENST00000634761.1
3UTR-3UTR TCA 90 bp ATAAGCAATGTCTTCTGCCCATCCAGCATGGGAAGTGGGTCCCACGTGAAGGGGGATTGGGGGATGTTCTaGGCTCCCCAGACAAGAACT +
Preference number: 2 (lower is better)
Translates to: ISNVFCPSSMGSGSHVKGDWGMF*APQTRT
Trigger: AGTTCTTGTCTGGGGAGCTCAGAACATCCCCCAATC...CCCCTTCACGTGGGACCCACTTCCCATGCTGGATGGGCAGAAGACATTGCTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR TCA 90 bp GTGGGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGGATTGGGGGATGTTCTaGGCTCCCCAGACAAGAACT +
Preference number: 2 (lower is better)
Translates to: VGAVRDEGGYSLAQEWLEDWGMF*APQTRT
Trigger: AGTTCTTGTCTGGGGAGCTCAGAACATCCCCCAATC...CTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR TCA 90 bp TCCACCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTATGTTCCCTTCAGCAGGCGCATaGAGTAGTGACAGATGGTTG +
Preference number: 2 (lower is better)
Translates to: STKSSCSSPAIRSRVSMFPSAGA*SSDRWL
Trigger: CAACCATCTGTCACTACTTCATGCGCCTGCTGAAGG...GAACATAGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
3UTR-3UTR GCA 90 bp CTTAGCCCAGGAGTGGTTAGAGACAGTGGGGCTGGTAGAGATGCCTGTTTAAGCTCCCCAGACAAGAACTaGTGGTTAAGAGGGGGCCAG +
Preference number: 2 (lower is better)
Translates to: LSPGVVRDSGAGRDACLSSPDKN*WLRGGQ
Trigger: CTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGA...GCTTAAACAGGCATCTCTACCAGCCCCACTGTCTCTAACCACTCCTGGGCTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR GCA 90 bp TGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTAGGTATGTCCCCAGACAAGAACTaGTGGTTAAGAGGGGGCCAG +
Preference number: 2 (lower is better)
Translates to: WVWVIFRGPHPHWGRLGMSPDKN*WLRGGQ
Trigger: CTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGA...CATACCTAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR CCA 90 bp TGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTAGGTATGGTGTTAGAGATTTGCTaGGGTTGGGGGCCAGGGTTG +
Preference number: 2 (lower is better)
Translates to: WVWVIFRGPHPHWGRLGMVLEIC*GWGPGL
Trigger: CAACCCTGGCCCCCAACCCCAGCAAATCTCTAACAC...CATACCTAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR TCA 90 bp AGACGATATCAGGCTTCACCAGGCTCTGACAGTCTTCACACTTGGGCGTCACCTCCTTCAGCAGGCGCATaGAGTAGTGACAGATGGTTG +
Preference number: 2 (lower is better)
Translates to: RRYQASPGSDSLHTWASPPSAGA*SSDRWL
Trigger: CAACCATCTGTCACTACTTCATGCGCCTGCTGAAGG...AGGTGACGCCCAAGTGTGAAGACTGTCAGAGCCTGGTGAAGCCTGATATCGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420440.5
ENST00000635486.1
3UTR-3UTR GCA 90 bp GGAGGACACAAGGAACAAATGCTTTGTAGCCACTGCCTGTGTTGTCTTTGGGGCAGGCTAAAAGATGGCTaGAGACAGCTGCTCGCCTGC +
Preference number: 2 (lower is better)
Translates to: GGHKEQMLCSHCLCCLWGRLKDG*RQLLAC
Trigger: GCAGGCGAGCAGCTGTCTGCAGCCATCTTTTAGCCT...GCCCCAAAGACAACACAGGCAGTGGCTACAAAGCATTTGTTCCTTGTGTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423526.5
ENST00000634761.1
3UTR-3UTR GCA 90 bp TCAGAGAAGATCTTCTCTTTCATCCAGCTTAGCGGGTATTCGTGCCGGCAGCTGAAAGTCGGGGATGCCTaGGGATGTGGAGATTCCAGC +
Preference number: 2 (lower is better)
Translates to: SEKIFSFIQLSGYSCRQLKVGDA*GCGDSS
Trigger: GCTGGAATCTCCACATCCGCAGGCATCCCCGACTTT...CAGCTGCCGGCACGAATACCCGCTAAGCTGGATGAAAGAGAAGATCTTCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
3UTR-3UTR GCA 90 bp CTTGAAATAGCTGATCTCAAAGATGGCCTCTGGGTAGGGAAGATGGTACTTCTCCGACAGCGTTCGCTCTaGATGTACCGGGCCACCCCT +
Preference number: 2 (lower is better)
Translates to: LEIADLKDGLWVGKMVLLRQRSL*MYRATP
Trigger: AGGGGTGGCCCGGTACATGCAGAGCGAACGCTGTCG...GAGAAGTACCATCTTCCCTACCCAGAGGCCATCTTTGAGATCAGCTATTTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
3UTR-3UTR CCA 90 bp GTGGGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGAGATGCAGCTGTCACTaGGGTTTCTCCCTCTCTGTT +
Preference number: 2 (lower is better)
Translates to: VGAVRDEGGYSLAQEWLERCSCH*GFSLSV
Trigger: AACAGAGAGGGAGAAACCCCAGTGACAGCTGCATCT...CTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
3UTR-3UTR CCA 90 bp TCAGAGAAGATCTTCTCTTTCATCCAGCTTAGCGGGTATTCGTGCCGGCAGCTGGTAGTGACAGATGGTTaGCCCCAGGGAACCGTCACA +
Preference number: 2 (lower is better)
Translates to: SEKIFSFIQLSGYSCRQLVVTDG*PQGTVT
Trigger: TGTGACGGTTCCCTGGGGCCAACCATCTGTCACTAC...CAGCTGCCGGCACGAATACCCGCTAAGCTGGATGAAAGAGAAGATCTTCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420440.5
ENST00000635486.1
3UTR-3UTR CCA 90 bp TGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTAGGTATGGTTTACGTGTTAGAGATTTGCTaGGGTTGGGGGCCAGGGTTG +
Preference number: 2 (lower is better)
Translates to: WVIFRGPHPHWGRLGMVYVLEIC*GWGPGL
Trigger: CAACCCTGGCCCCCAACCCCAGCAAATCTCTAACAC...GTAAACCATACCTAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR CCA 90 bp CTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTATGCCTGTTTAAGCCTTaGCCTCTAGGAGGTGTTAGA +
Preference number: 2 (lower is better)
Translates to: LRWVWVIFRGPHPHWGRLCLFKP*PLGGVR
Trigger: TCTAACACCTCCTAGAGGCCAAGGCTTAAACAGGCA...TAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR CCA 90 bp TGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTAGGTATGGTTTACTCCTTAGCCCAGGAGTaGTTAGAGACAGTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: WVIFRGPHPHWGRLGMVYSLAQE*LETVGL
Trigger: CAGCCCCACTGTCTCTAACCACTCCTGGGCTAAGGA...GTAAACCATACCTAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR GCA 90 bp ATAGAGTTCCTTGGCGAGGGCGAAGAAGGGTTCCGGATGTTTCTTGAAATAGCTAGCGAAAGTCGGGGATaGCTGCGGATGTGGAGATTC +
Preference number: 2 (lower is better)
Translates to: IEFLGEGEEGFRMFLEIASESRG*LRMWRF
Trigger: GAATCTCCACATCCGCAGGCATCCCCGACTTTCGCT...AGCTATTTCAAGAAACATCCGGAACCCTTCTTCGCCCTCGCCAAGGAACTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443898.5
ENST00000451193.5
ENST00000635627.1
ENST00000635694.1
3UTR-3UTR GCA 90 bp TTCCGGATGTTTCTTGAAATAGCTGATCTCAAAGATGGCCTCTGGGTAGGGAAGAAAGTCGGGGATGCCTaGGGATGTGGAGATTCCAGC +
Preference number: 2 (lower is better)
Translates to: FRMFLEIADLKDGLWVGKKVGDA*GCGDSS
Trigger: GCTGGAATCTCCACATCCGCAGGCATCCCCGACTTT...CTTCCCTACCCAGAGGCCATCTTTGAGATCAGCTATTTCAAGAAACATCCGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443898.5
ENST00000451193.5
ENST00000635627.1
ENST00000635694.1
3UTR TCA 72 bp AGAGGGGGCCAGGCCCGGTTGGGGCTCAGCTGTCCCTaGGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTG +
Preference number: 3 (lower is better)
Translates to: RGGQARLGLSCP*GARHPAWEMQL
Trigger: CAGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCCCAACCGGGCCTGGCCCCCTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR GCA 72 bp GGGACCCCCGCCCCCGACTGGGCATCTATGCTGGCGTaGTCCCTCCGGACAAGGTCCTCCAGCTCCTTCTTC +
Preference number: 3 (lower is better)
Translates to: GTPAPDWASMLA*SLRTRSSSSFF
Trigger: GAAGAAGGAGCTGGAGGACCTTGTCCGGAGGGAGCACGCCAGCATAGATGCCCAGTCGGGGGCGGGGGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
3UTR-3UTR CAA 90 bp TGGGGCTCAGCTGTCCCTGAGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTGTGGTGGCGGGGACTTCTaGGGGGAAGCTGAAGTGCTG +
Preference number: 3 (lower is better)
Translates to: WGSAVPEELGIPPGRCSCGGGDF*GEAEVL
Trigger: CAGCACTTCAGCTTCCCCCAAGAAGTCCCCGCCACC...ACAGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
3UTR CCA 72 bp GAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTaGGTTATATTCAGAGGCCCACACCCACACTGGGGT +
Preference number: 3 (lower is better)
Translates to: EPSRLRLPLRWV*VIFRGPHPHWG
Trigger: ACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR CCA 72 bp ACTCGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTaGGTGTGGGTTATATTCAGAGGCCCACACCCACAC +
Preference number: 3 (lower is better)
Translates to: TREPSRLRLPLR*VWVIFRGPHPH
Trigger: GTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR CCA 72 bp GAGCTCGGCATCCCGCCTGGGAGATGCAGCTGTCACTaGGGTTTCTCCCTCTCTGTTGTCCTGGCCTCGTCC +
Preference number: 3 (lower is better)
Translates to: ELGIPPGRCSCH*GFSLSVVLASS
Trigger: GGACGAGGCCAGGACAACAGAGAGGGAGAAACCCCAGTGACAGCTGCATCTCCCAGGCGGGATGCCGAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
3UTR-3UTR CAA 90 bp AAGTGGGTCCCACGTGAAGGGGGCCCACCACCCACTTTGGGAGCTGAAGGCAGAAGAGATTTGCTGGGGTaGGGGGCCAGGGTTGCTGGG +
Preference number: 3 (lower is better)
Translates to: KWVPREGGPPPTLGAEGRRDLLG*GARVAG
Trigger: CCCAGCAACCCTGGCCCCCAACCCCAGCAAATCTCT...TCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCCCCCTTCACGTGGGACCCACTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR CAA 90 bp GGGCCCGAAGCTCCCTGTCCTGGAAGAGTTAAAAGTTCTGGGGTAGCCCTGGCCAGAGATTTGCTGGGGTaGGGGGCCAGGGTTGCTGGG +
Preference number: 3 (lower is better)
Translates to: GPEAPCPGRVKSSGVALARDLLG*GARVAG
Trigger: CCCAGCAACCCTGGCCCCCAACCCCAGCAAATCTCT...GGCCAGGGCTACCCCAGAACTTTTAACTCTTCCAGGACAGGGAGCTTCGGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR CAA 90 bp AGGCCGGTGGATGGAGAGCGAAAGTCGGGGATGCCTGCGGATGTGGAGATTCCACGCAGGAGTAGCCCCTaGTCCTTCAGCAGGCGCATG +
Preference number: 3 (lower is better)
Translates to: RPVDGERKSGMPADVEIPRRSSP*SFSRRM
Trigger: CATGCGCCTGCTGAAGGACAAGGGGCTACTCCTGCG...TGGAATCTCCACATCCGCAGGCATCCCCGACTTTCGCTCTCCATCCACCGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
3UTR-3UTR CAA 90 bp ATCCAGCTTAGCGGGTATTCGTGCCGGCAGCTGGCGCTGACGCAGTGTGATGTGCGCAGGAGTAGCCCCTaGTCCTTCAGCAGGCGCATG +
Preference number: 3 (lower is better)
Translates to: IQLSGYSCRQLALTQCDVRRSSP*SFSRRM
Trigger: CATGCGCCTGCTGAAGGACAAGGGGCTACTCCTGCG...CACATCACACTGCGTCAGCGCCAGCTGCCGGCACGAATACCCGCTAAGCTGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
3UTR TCA 72 bp TCCAGCTTAGCGGGTATTCGTGCCGGCAGCTGGCGCTaGCGCAGTGTGATGTGTAGAAGGTGCCGTGCGCCT +
Preference number: 3 (lower is better)
Translates to: SSLAGIRAGSWR*RSVMCRRCRAP
Trigger: AGGCGCACGGCACCTTCTACACATCACACTGCGTCAGCGCCAGCTGCCGGCACGAATACCCGCTAAGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
3UTR GCA 72 bp TGTTGTCTTTGGGGCCTGCCCAGGCTAAAAGATGGCTaGAGACAGCTGCTCGCCTGCCGCAGGAGAGGGAGG +
Preference number: 3 (lower is better)
Translates to: CCLWGLPRLKDG*RQLLACRRRGR
Trigger: CCTCCCTCTCCTGCGGCAGGCGAGCAGCTGTCTGCAGCCATCTTTTAGCCTGGGCAGGCCCCAAAGACAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423526.5
ENST00000634761.1
3UTR-3UTR CAA 90 bp CGCAGTGTGATGTGTAGAAGGTGCCGTGCGCCTCCACCAAGTCCTCCTGTTCCACGCAGGAGTAGCCCCTaGTCCTTCAGCAGGCGCATG +
Preference number: 3 (lower is better)
Translates to: RSVMCRRCRAPPPSPPVPRRSSP*SFSRRM
Trigger: CATGCGCCTGCTGAAGGACAAGGGGCTACTCCTGCG...TGGAACAGGAGGACTTGGTGGAGGCGCACGGCACCTTCTACACATCACACTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
3UTR-3UTR CAA 90 bp TCTTTCATCCAGCTTAGCGGGTATTCGTGCCGGCAGCTGGCGCTGACGCAGTGTAGTAGTGACAGATGGTaGGCCCCAGGGAACCGTCAC +
Preference number: 3 (lower is better)
Translates to: SFIQLSGYSCRQLALTQCSSDRW*APGNRH
Trigger: GTGACGGTTCCCTGGGGCCAACCATCTGTCACTACT...ACACTGCGTCAGCGCCAGCTGCCGGCACGAATACCCGCTAAGCTGGATGAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420440.5
ENST00000635486.1
3UTR-3UTR CAA 90 bp GGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGACAGGTGGCGGGGACTTCTaGGGGGAAGCTGAAGTGCTG +
Preference number: 3 (lower is better)
Translates to: GAVRDEGGYSLAQEWLETGGGDF*GEAEVL
Trigger: CAGCACTTCAGCTTCCCCCAAGAAGTCCCCGCCACC...TGTCTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
3UTR-3UTR CAA 90 bp CTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTAGTTTCTCCCTCTCTGTaGTCCTGGCCTCGTCCTTGG +
Preference number: 3 (lower is better)
Translates to: LRWVWVIFRGPHPHWGRLVSPSL*SWPRPW
Trigger: CCAAGGACGAGGCCAGGACAACAGAGAGGGAGAAAC...TAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
3UTR CCA 72 bp AATAAGCAATGTCTTCTGCCCATCCAGCATGGGAAGTaGGTCCCACGTGAAGGGGGCCCACCACCCACTTTG +
Preference number: 3 (lower is better)
Translates to: NKQCLLPIQHGK*VPREGGPPPTL
Trigger: CAAAGTGGGTGGTGGGCCCCCTTCACGTGGGACCCACTTCCCATGCTGGATGGGCAGAAGACATTGCTTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR-3UTR CAA 90 bp AGACGATATCAGGCTTCACCAGGCTCTGACAGTCTTCACACTTGGGCGTCACCTAGTAGTGACAGATGGTaGGCCCCAGGGAACCGTCAC +
Preference number: 3 (lower is better)
Translates to: RRYQASPGSDSLHTWASPSSDRW*APGNRH
Trigger: GTGACGGTTCCCTGGGGCCAACCATCTGTCACTACT...AGGTGACGCCCAAGTGTGAAGACTGTCAGAGCCTGGTGAAGCCTGATATCGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420440.5
ENST00000635486.1
3UTR CCA 72 bp GAAGATGGTACTTCTCTAGGTTGTCATAGAGGCCGGTaGATGGAGAGCGAAAGTCGGGGATGCCTGCGGATG +
Preference number: 3 (lower is better)
Translates to: EDGTSLGCHRGR*MESESRGCLRM
Trigger: CATCCGCAGGCATCCCCGACTTTCGCTCTCCATCCACCGGCCTCTATGACAACCTAGAGAAGTACCATCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000423526.5
ENST00000443898.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
ENST00000635694.1
3UTR GCA 72 bp GCAGGAGGACACAAGGAACAAATGCTTTGTAGCCACTaGCTGTGTTGTCTTTGGGGCCTGCCCAGGCTAAAA +
Preference number: 3 (lower is better)
Translates to: AGGHKEQMLCSH*LCCLWGLPRLK
Trigger: TTTTAGCCTGGGCAGGCCCCAAAGACAACACAGGCAGTGGCTACAAAGCATTTGTTCCTTGTGTCCTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423526.5
ENST00000634761.1
3UTR CCA 72 bp GTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTaGTTAGAGACAGTGGGGCTGGTAGAGATGCCTGTT +
Preference number: 3 (lower is better)
Translates to: VRDEGGYSLAQE*LETVGLVEMPV
Trigger: AACAGGCATCTCTACCAGCCCCACTGTCTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
3UTR CCA 72 bp TGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTaGGGTAGGTTAGGTATGGTTTACTTAGCCACAGGC +
Preference number: 3 (lower is better)
Translates to: WVWVIFRGPHPH*GRLGMVYLATG
Trigger: GCCTGTGGCTAAGTAAACCATACCTAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp GGGCCAGGCCCGGTTGGGGCTCAGCTGTCCCTGAGGAGCTCGGCATCCCGCCTGCTTAGCGGGTATTCGTaGCGGCAGCTGGCGCTGACG +
Preference number: 4 (lower is better)
Translates to: GPGPVGAQLSLRSSASRLLSGYS*RQLALT
Trigger: CGTCAGCGCCAGCTGCCGGCACGAATACCCGCTAAG...CAGGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCCCAACCGGGCCTGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GGGCCAGGCCCGGTTGGGGCTCAGCTGTCCCTGAGGAGCTCGGCATCCCGCCTGTCCTGGCCTCGTCCTTaGCAGGTGGCGGGGACTTCT +
Preference number: 4 (lower is better)
Translates to: GPGPVGAQLSLRSSASRLSWPRP*QVAGTS
Trigger: AGAAGTCCCCGCCACCTGCCAAGGACGAGGCCAGGA...CAGGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCCCAACCGGGCCTGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp GGGCCAGGCCCGGTTGGGGCTCAGCTGTCCCTGAGGAGCTCGGCATCCCGCCTGGGCTTCACCAGGCTCTaGCAGTCTTCACACTTGGGC +
Preference number: 4 (lower is better)
Translates to: GPGPVGAQLSLRSSASRLGFTRL*QSSHLG
Trigger: GCCCAAGTGTGAAGACTGTCAGAGCCTGGTGAAGCC...CAGGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCCCAACCGGGCCTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp TGGGGCTCAGCTGTCCCTGAGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTGTGAAGTGGGTCCCACGTaGAGGGGGCCCACCACCCAC +
Preference number: 4 (lower is better)
Translates to: WGSAVPEELGIPPGRCSCEVGPT*RGPTTH
Trigger: GTGGGTGGTGGGCCCCCTTCACGTGGGACCCACTTC...ACAGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
CDS-3UTR GCA 90 bp GACCCCCGCCCCCGACTGGGCATCTATGCTGGCGTGCTCCCTCCGGACAAGGTCCTTAGCGGGTATTCGTaGCGGCAGCTGGCGCTGACG +
Preference number: 4 (lower is better)
Translates to: DPRPRLGIYAGVLPPDKVLSGYS*RQLALT
Trigger: CGTCAGCGCCAGCTGCCGGCACGAATACCCGCTAAG...GACCTTGTCCGGAGGGAGCACGCCAGCATAGATGCCCAGTCGGGGGCGGGGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
CDS-3UTR GCA 90 bp GGGCCAGGCCCGGTTGGGGCTCAGCTGTCCCTGAGGAGCTCGGCATCCCGCCTGGCAAAGGGCTGCACCTaGAAGGAGGTACCCATGACC +
Preference number: 4 (lower is better)
Translates to: GPGPVGAQLSLRSSASRLAKGCT*KEVPMT
Trigger: GGTCATGGGTACCTCCTTGCAGGTGCAGCCCTTTGC...CAGGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCCCAACCGGGCCTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249396.12
ENST00000392081.6
ENST00000634533.2
ENST00000635478.1
CDS-3UTR GCA 90 bp GGGCCAGGCCCGGTTGGGGCTCAGCTGTCCCTGAGGAGCTCGGCATCCCGCCTGATCCCGCCTGGGAGATaGAGCTGTCACTGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: GPGPVGAQLSLRSSASRLIPPGR*SCHWGF
Trigger: GAAACCCCAGTGACAGCTGCATCTCCCAGGCGGGAT...CAGGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCCCAACCGGGCCTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GGGCCAGGCCCGGTTGGGGCTCAGCTGTCCCTGAGGAGCTCGGCATCCCGCCTGGGATGCCTGCGGATGTaGAGATTCCAGCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: GPGPVGAQLSLRSSASRLGCLRM*RFQLPP
Trigger: TGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCC...CAGGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCCCAACCGGGCCTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GCAGAGACTCGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTAGGGCCAGGCAGCCCTaGTCGCATTCACCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: AETREPSRLRLPLRWVWVRARQP*SHSPSQ
Trigger: CTGGCTGGGTGAATGCGACCAGGGCTGCCTGGCCCT...AACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCGAGTCTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GTTGGGGCTCAGCTGTCCCTGAGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTACCCCCGCCCCCGACTaGGCATCTATGCTGGCGTGC +
Preference number: 4 (lower is better)
Translates to: VGAQLSLRSSASRLGDAATPAPD*ASMLAC
Trigger: GCACGCCAGCATAGATGCCCAGTCGGGGGCGGGGGT...AGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCCCAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp CGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGGCTCAGCTGTCCCTaGGGAGCTCGGCATCCCGCC +
Preference number: 4 (lower is better)
Translates to: REPSRLRLPLRWVWVIFRGLSCP*GARHPA
Trigger: GGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCC...TCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp GGGCCAGGCCCGGTTGGGGCTCAGCTGTCCCTGAGGAGCTCGGCATCCCGCCTGAGCGAAAGTCGGGGATaGCTGCGGATGTGGAGATTC +
Preference number: 4 (lower is better)
Translates to: GPGPVGAQLSLRSSASRLSESRG*LRMWRF
Trigger: GAATCTCCACATCCGCAGGCATCCCCGACTTTCGCT...CAGGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCCCAACCGGGCCTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp GACCCCCGCCCCCGACTGGGCATCTATGCTGGCGTGCTCCCTCCGGACAAGGTCGCATCTATGCTGGCGTaGTCCCTCCGGACAAGGTCC +
Preference number: 4 (lower is better)
Translates to: DPRPRLGIYAGVLPPDKVASMLA*SLRTRS
Trigger: GGACCTTGTCCGGAGGGAGCACGCCAGCATAGATGC...GACCTTGTCCGGAGGGAGCACGCCAGCATAGATGCCCAGTCGGGGGCGGGGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
CDS-3UTR CCA 90 bp GCAGAGACTCGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTAGCAGACGCTCCTTCTaGCTGCCCAGGCTGAGCGTC +
Preference number: 4 (lower is better)
Translates to: AETREPSRLRLPLRWVWVSRRSF*LPRLSV
Trigger: GACGCTCAGCCTGGGCAGCCAGAAGGAGCGTCTGCT...AACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCGAGTCTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CGCCCCCGACTGGGCATCTATGCTGGCGTGCTCCCTCCGGACAAGGTCCTCCAGAGCAGACGCTCCTTCTaGCTGCCCAGGCTGAGCGTC +
Preference number: 4 (lower is better)
Translates to: RPRLGIYAGVLPPDKVLQSRRSF*LPRLSV
Trigger: GACGCTCAGCCTGGGCAGCCAGAAGGAGCGTCTGCT...CTGGAGGACCTTGTCCGGAGGGAGCACGCCAGCATAGATGCCCAGTCGGGGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
CDS-3UTR CCA 90 bp GTCCCTGAGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTGTCACTGGGGTTTCACCCCCGCCCCCGACTaGGCATCTATGCTGGCGTGC +
Preference number: 4 (lower is better)
Translates to: VPEELGIPPGRCSCHWGFTPAPD*ASMLAC
Trigger: GCACGCCAGCATAGATGCCCAGTCGGGGGCGGGGGT...GAAACCCCAGTGACAGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
CDS-3UTR CCA 90 bp GACCCCCGCCCCCGACTGGGCATCTATGCTGGCGTGCTCCCTCCGGACAAGGTCGAGTCCCAGAAGGCGTaGCGTCAGCAGCCATGTTGG +
Preference number: 4 (lower is better)
Translates to: DPRPRLGIYAGVLPPDKVESQKA*RQQPCW
Trigger: CCAACATGGCTGCTGACGCCACGCCTTCTGGGACTC...GACCTTGTCCGGAGGGAGCACGCCAGCATAGATGCCCAGTCGGGGGCGGGGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
CDS-3UTR TCA 90 bp GGGCCAGGCCCGGTTGGGGCTCAGCTGTCCCTGAGGAGCTCGGCATCCCGCCTGCCTTCAGCAGGCGCATaGAGTAGTGACAGATGGTTG +
Preference number: 4 (lower is better)
Translates to: GPGPVGAQLSLRSSASRLPSAGA*SSDRWL
Trigger: CAACCATCTGTCACTACTTCATGCGCCTGCTGAAGG...CAGGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCCCAACCGGGCCTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp GCAGAGACTCGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTGCAAGGAGGTACCCATaGCCAGGAGGAGGTCCACCT +
Preference number: 4 (lower is better)
Translates to: AETREPSRLRLPLRWVWVARRYP*PGGGPP
Trigger: AGGTGGACCTCCTCCTGGTCATGGGTACCTCCTTGC...AACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCGAGTCTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp CCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCAGAAGTGGGTCCCACGTaGAGGGGGCCCACCACCCAC +
Preference number: 4 (lower is better)
Translates to: PSRLRLPLRWVWVIFRGPEVGPT*RGPTTH
Trigger: GTGGGTGGTGGGCCCCCTTCACGTGGGACCCACTTC...TGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp GCAGAGACTCGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTGACTGCTCTGTCCCGTaGCGGCACCAGAAATGGGAG +
Preference number: 4 (lower is better)
Translates to: AETREPSRLRLPLRWVWVDCSVP*RHQKWE
Trigger: CTCCCATTTCTGGTGCCGTCACGGGACAGAGCAGTC...AACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCGAGTCTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358931.9
ENST00000392081.6
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp GACCCCCGCCCCCGACTGGGCATCTATGCTGGCGTGCTCCCTCCGGACAAGGTCATCCCGCCTGGGAGATaGAGCTGTCACTGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: DPRPRLGIYAGVLPPDKVIPPGR*SCHWGF
Trigger: GAAACCCCAGTGACAGCTGCATCTCCCAGGCGGGAT...GACCTTGTCCGGAGGGAGCACGCCAGCATAGATGCCCAGTCGGGGGCGGGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
CDS-3UTR CCA 90 bp GGGCCAGGCCCGGTTGGGGCTCAGCTGTCCCTGAGGAGCTCGGCATCCCGCCTGCAGGATAGAGTTCCTTaGCGAGGGCGAAGAAGGGTT +
Preference number: 4 (lower is better)
Translates to: GPGPVGAQLSLRSSASRLQDRVP*RGRRRV
Trigger: AACCCTTCTTCGCCCTCGCCAAGGAACTCTATCCTG...CAGGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCCCAACCGGGCCTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GGGCCAGGCCCGGTTGGGGCTCAGCTGTCCCTGAGGAGCTCGGCATCCCGCCTGCCCTGTAGGCCTTCTTaGAGTCAAAGTCCATGCCTC +
Preference number: 4 (lower is better)
Translates to: GPGPVGAQLSLRSSASRLPCRPS*SQSPCL
Trigger: GAGGCATGGACTTTGACTCCAAGAAGGCCTACAGGG...CAGGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCCCAACCGGGCCTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249396.12
ENST00000392081.6
ENST00000634533.2
ENST00000635478.1
CDS-3UTR CCA 90 bp AGTGGGTCCCACGTGAAGGGGGCCCACCACCCACTTTGGGAGCTGAAGGCAGAGAGGGCCAGGCAGCCCTaGTCGCATTCACCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SGSHVKGAHHPLWELKAERARQP*SHSPSQ
Trigger: CTGGCTGGGTGAATGCGACCAGGGCTGCCTGGCCCT...CTCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCCCCCTTCACGTGGGACCCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp TCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGACCCCCGCCCCCGACTaGGCATCTATGCTGGCGTGC +
Preference number: 4 (lower is better)
Translates to: SELPRQELLVKRGPGPVGTPAPD*ASMLAC
Trigger: GCACGCCAGCATAGATGCCCAGTCGGGGGCGGGGGT...CCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCAACCCCCGCCCCCGACTaGGCATCTATGCTGGCGTGC +
Preference number: 4 (lower is better)
Translates to: PSRLRLPLRWVWVIFRGPTPAPD*ASMLAC
Trigger: GCACGCCAGCATAGATGCCCAGTCGGGGGCGGGGGT...TGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GTTGGGGCTCAGCTGTCCCTGAGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTTCCTGGCCTCGTCCTTaGCAGGTGGCGGGGACTTCT +
Preference number: 4 (lower is better)
Translates to: VGAQLSLRSSASRLGDAASWPRP*QVAGTS
Trigger: AGAAGTCCCCGCCACCTGCCAAGGACGAGGCCAGGA...AGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCCCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GCAGAGACTCGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTGAGATTTGCTGGGGTTaGGGGCCAGGGTTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: AETREPSRLRLPLRWVWVEICWG*GPGLLG
Trigger: TCCCAGCAACCCTGGCCCCCAACCCCAGCAAATCTC...AACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCGAGTCTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CGCCCCCGACTGGGCATCTATGCTGGCGTGCTCCCTCCGGACAAGGTCCTCCAGGAGATTTGCTGGGGTTaGGGGCCAGGGTTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: RPRLGIYAGVLPPDKVLQEICWG*GPGLLG
Trigger: TCCCAGCAACCCTGGCCCCCAACCCCAGCAAATCTC...CTGGAGGACCTTGTCCGGAGGGAGCACGCCAGCATAGATGCCCAGTCGGGGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
CDS-3UTR TCA 90 bp GTTGGGGCTCAGCTGTCCCTGAGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTGGCGCTGACGCAGTGTaGTGTGTAGAAGGTGCCGTG +
Preference number: 4 (lower is better)
Translates to: VGAQLSLRSSASRLGDAAGADAV*CVEGAV
Trigger: CACGGCACCTTCTACACATCACACTGCGTCAGCGCC...AGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCCCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp AGTAGTGACAGATGGTTGGCCCCAGGGAACCGTCACAGCAGCCGCGTCGGGGAGGCCGGCAGCTGGCGCTaGCGCAGTGTGATGTGTAGA +
Preference number: 4 (lower is better)
Translates to: SSDRWLAPGNRHSSRVGEAGSWR*RSVMCR
Trigger: TCTACACATCACACTGCGTCAGCGCCAGCTGCCGGC...CTCCCCGACGCGGCTGCTGTGACGGTTCCCTGGGGCCAACCATCTGTCACTACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420440.5
ENST00000635486.1
CDS-3UTR TCA 90 bp GGATGGAGAGCGAAAGTCGGGGATGCCTGCGGATGTGGAGATTCCAGCTCCCACGCAGGCCTGGCTGCCTaGGGAGGGAGACAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GWRAKVGDACGCGDSSSHAGLAA*GGRQWQ
Trigger: CTGCCACTGTCTCCCTCCTCAGGCAGCCAGGCCTGC...GTGGGAGCTGGAATCTCCACATCCGCAGGCATCCCCGACTTTCGCTCTCCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423526.5
ENST00000634761.1
CDS-3UTR GCA 90 bp AAGGTGCCGTGCGCCTCCACCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCCGACAGCGTTCGCTCTaGATGTACCGGGCCACCCCT +
Preference number: 4 (lower is better)
Translates to: KVPCASTKSSCSSPAIRSRQRSL*MYRATP
Trigger: AGGGGTGGCCCGGTACATGCAGAGCGAACGCTGTCG...GGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGGTGGAGGCGCACGGCACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR GCA 90 bp GTCCCTGAGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTGTCACTGGGGTTTCCCGACTGGGCATCTATaGTGGCGTGCTCCCTCCGGA +
Preference number: 4 (lower is better)
Translates to: VPEELGIPPGRCSCHWGFPTGHL*WRAPSG
Trigger: TCCGGAGGGAGCACGCCAGCATAGATGCCCAGTCGG...GAAACCCCAGTGACAGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
CDS-3UTR GCA 90 bp CCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGGCTCAGCTGCCGACTGGGCATCTATaGTGGCGTGCTCCCTCCGGA +
Preference number: 4 (lower is better)
Translates to: PRQELLVKRGPGPVGAQLPTGHL*WRAPSG
Trigger: TCCGGAGGGAGCACGCCAGCATAGATGCCCAGTCGG...CAGCTGAGCCCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp AAGTGGGTCCCACGTGAAGGGGGCCCACCACCCACTTTGGGAGCTGAAGGCAGAAGGGTGAGAGGGGTCTaGCTCTGCCATGGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: KWVPREGGPPPTLGAEGRRVRGV*LCHGRG
Trigger: ACCGCGCCCATGGCAGAGCCAGACCCCTCTCACCCT...TCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCCCCCTTCACGTGGGACCCACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249396.12
ENST00000634533.2
CDS-3UTR CCA 90 bp CGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAAGGGCCAGGCAGCCCTaGTCGCATTCACCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: REPSRLRLPLRWVWVIFRRARQP*SHSPSQ
Trigger: CTGGCTGGGTGAATGCGACCAGGGCTGCCTGGCCCT...TCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GGGCCCGAAGCTCCCTGTCCTGGAAGAGTTAAAAGTTCTGGGGTAGCCCTGGCCACCCCCGCCCCCGACTaGGCATCTATGCTGGCGTGC +
Preference number: 4 (lower is better)
Translates to: GPEAPCPGRVKSSGVALATPAPD*ASMLAC
Trigger: GCACGCCAGCATAGATGCCCAGTCGGGGGCGGGGGT...GGCCAGGGCTACCCCAGAACTTTTAACTCTTCCAGGACAGGGAGCTTCGGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCGCTCGGCATCCCGCCTaGGAGATGCAGCTGTCACTG +
Preference number: 4 (lower is better)
Translates to: ALPAQTPPTLGVGYIQRPARHPA*EMQLSL
Trigger: CAGTGACAGCTGCATCTCCCAGGCGGGATGCCGAGC...GGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCGTAGCCCTGGCCCCGTaGGGGCAGTTAGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: ALPAQTPPTLGVGYIQRPVALAP*GQLEMR
Trigger: CCTCATCTCTAACTGCCCCCACGGGGCCAGGGCTAC...GGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp GTTGGGGCTCAGCTGTCCCTGAGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTCTCCCACCAAACAGATaGCTCTGCGACAGCGTTCGC +
Preference number: 4 (lower is better)
Translates to: VGAQLSLRSSASRLGDAALPPNR*LCDSVR
Trigger: GCGAACGCTGTCGCAGAGTCATCTGTTTGGTGGGAG...AGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCCCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp AGTAGTGACAGATGGTTGGCCCCAGGGAACCGTCACAGCAGCCGCGTCGGGGAGGGCGCTGACGCAGTGTaGTGTGTAGAAGGTGCCGTG +
Preference number: 4 (lower is better)
Translates to: SSDRWLAPGNRHSSRVGEGADAV*CVEGAV
Trigger: CACGGCACCTTCTACACATCACACTGCGTCAGCGCC...CTCCCCGACGCGGCTGCTGTGACGGTTCCCTGGGGCCAACCATCTGTCACTACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420440.5
ENST00000635486.1
CDS-3UTR TCA 90 bp AAGGTGCCGTGCGCCTCCACCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCGGCGCTGACGCAGTGTaGTGTGTAGAAGGTGCCGTG +
Preference number: 4 (lower is better)
Translates to: KVPCASTKSSCSSPAIRSGADAV*CVEGAV
Trigger: CACGGCACCTTCTACACATCACACTGCGTCAGCGCC...GGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGGTGGAGGCGCACGGCACCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR TCA 90 bp TCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGGCCGGCAGCTGGCGCTaGCGCAGTGTGATGTGTAGA +
Preference number: 4 (lower is better)
Translates to: SELPRQELLVKRGPGPVGAGSWR*RSVMCR
Trigger: TCTACACATCACACTGCGTCAGCGCCAGCTGCCGGC...CCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp GTGATGTGTAGAAGGTGCCGTGCGCCTCCACCAAGTCCTCCTGTTCCAGCCCGGGCCGGCAGCTGGCGCTaGCGCAGTGTGATGTGTAGA +
Preference number: 4 (lower is better)
Translates to: VMCRRCRAPPPSPPVPARAGSWR*RSVMCR
Trigger: TCTACACATCACACTGCGTCAGCGCCAGCTGCCGGC...CCGGGCTGGAACAGGAGGACTTGGTGGAGGCGCACGGCACCTTCTACACATCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR TCA 90 bp CCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGGCTCAGCTGTGCCGGCAGCTGGCGCTaGCGCAGTGTGATGTGTAGA +
Preference number: 4 (lower is better)
Translates to: PDKNCWLRGGQARLGLSCAGSWR*RSVMCR
Trigger: TCTACACATCACACTGCGTCAGCGCCAGCTGCCGGC...ACAGCTGAGCCCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp CGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGCCGGCAGCTGGCGCTaGCGCAGTGTGATGTGTAGA +
Preference number: 4 (lower is better)
Translates to: REPSRLRLPLRWVWVIFRAGSWR*RSVMCR
Trigger: TCTACACATCACACTGCGTCAGCGCCAGCTGCCGGC...TCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp TGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGAAGTGGGTCCCACGTaGAGGGGGCCCACCACCCAC +
Preference number: 4 (lower is better)
Translates to: CSELPRQELLVKRGPGPVEVGPT*RGPTTH
Trigger: GTGGGTGGTGGGCCCCCTTCACGTGGGACCCACTTC...AACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp CCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGGCTCAGCTGTCGACAGCGTTCGCTCTaGATGTACCGGGCCACCCCT +
Preference number: 4 (lower is better)
Translates to: PDKNCWLRGGQARLGLSCRQRSL*MYRATP
Trigger: AGGGGTGGCCCGGTACATGCAGAGCGAACGCTGTCG...ACAGCTGAGCCCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp GTGATGTGTAGAAGGTGCCGTGCGCCTCCACCAAGTCCTCCTGTTCCAGCCCGGCGACAGCGTTCGCTCTaGATGTACCGGGCCACCCCT +
Preference number: 4 (lower is better)
Translates to: VMCRRCRAPPPSPPVPARRQRSL*MYRATP
Trigger: AGGGGTGGCCCGGTACATGCAGAGCGAACGCTGTCG...CCGGGCTGGAACAGGAGGACTTGGTGGAGGCGCACGGCACCTTCTACACATCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR GCA 90 bp CCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCACGACAGCGTTCGCTCTaGATGTACCGGGCCACCCCT +
Preference number: 4 (lower is better)
Translates to: PSRLRLPLRWVWVIFRGPRQRSL*MYRATP
Trigger: AGGGGTGGCCCGGTACATGCAGAGCGAACGCTGTCG...TGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp GCAGAGACTCGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTAAAGTCGGGGATGCCTaGGGATGTGGAGATTCCAGC +
Preference number: 4 (lower is better)
Translates to: AETREPSRLRLPLRWVWVKVGDA*GCGDSS
Trigger: GCTGGAATCTCCACATCCGCAGGCATCCCCGACTTT...AACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCGAGTCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp GCAGAGACTCGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTAGCGAAAGTCGGGGATaGCTGCGGATGTGGAGATTC +
Preference number: 4 (lower is better)
Translates to: AETREPSRLRLPLRWVWVSESRG*LRMWRF
Trigger: GAATCTCCACATCCGCAGGCATCCCCGACTTTCGCT...AACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCGAGTCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp GCAGAGACTCGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTGTGATGTGTAGAAGGTaGCGTGCGCCTCCACCAAGT +
Preference number: 4 (lower is better)
Translates to: AETREPSRLRLPLRWVWVVMCRR*RAPPPS
Trigger: ACTTGGTGGAGGCGCACGGCACCTTCTACACATCAC...AACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCGAGTCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp GTGCGCCTCCACCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCCTTAGCGGGTATTCGTaGCGGCAGCTGGCGCTGACG +
Preference number: 4 (lower is better)
Translates to: VRLHQVLLFQPGYSLQGILSGYS*RQLALT
Trigger: CGTCAGCGCCAGCTGCCGGCACGAATACCCGCTAAG...GATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGGTGGAGGCGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR GCA 90 bp GGCCGGTGGATGGAGAGCGAAAGTCGGGGATGCCTGCGGATGTGGAGATTCCAGCTTAGCGGGTATTCGTaGCGGCAGCTGGCGCTGACG +
Preference number: 4 (lower is better)
Translates to: GRWMESESRGCLRMWRFQLSGYS*RQLALT
Trigger: CGTCAGCGCCAGCTGCCGGCACGAATACCCGCTAAG...CTGGAATCTCCACATCCGCAGGCATCCCCGACTTTCGCTCTCCATCCACCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
CDS-3UTR GCA 90 bp CGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGACCGACTGGGCATCTATaGTGGCGTGCTCCCTCCGGA +
Preference number: 4 (lower is better)
Translates to: REPSRLRLPLRWVWVIFRPTGHL*WRAPSG
Trigger: TCCGGAGGGAGCACGCCAGCATAGATGCCCAGTCGG...TCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp GTTGGGGCTCAGCTGTCCCTGAGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTACTCTCAGCAGACATTaGGGCCGCAGACGCGCTTTC +
Preference number: 4 (lower is better)
Translates to: VGAQLSLRSSASRLGDAATLSRH*GRRRAF
Trigger: GAAAGCGCGTCTGCGGCCGCAATGTCTGCTGAGAGT...AGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCCCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358931.9
ENST00000392081.6
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp TCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGGCCAGGCCACGTCCCTaGAAGGAGGTACCCATGACC +
Preference number: 4 (lower is better)
Translates to: SELPRQELLVKRGPGPVGARPRP*KEVPMT
Trigger: GGTCATGGGTACCTCCTTGCAGGGACGTGGCCTGGC...CCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
CDS-3UTR CCA 90 bp TGCGCCTCCACCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTAGGGTGAGAGGGGTCTaGCTCTGCCATGGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: CASTKSSCSSPAIRSRVSRVRGV*LCHGRG
Trigger: ACCGCGCCCATGGCAGAGCCAGACCCCTCTCACCCT...AGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGGTGGAGGCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
CDS-3UTR CCA 90 bp GTGATGTGTAGAAGGTGCCGTGCGCCTCCACCAAGTCCTCCTGTTCCAGCCCGGAGCAGACGCTCCTTCTaGCTGCCCAGGCTGAGCGTC +
Preference number: 4 (lower is better)
Translates to: VMCRRCRAPPPSPPVPARSRRSF*LPRLSV
Trigger: GACGCTCAGCCTGGGCAGCCAGAAGGAGCGTCTGCT...CCGGGCTGGAACAGGAGGACTTGGTGGAGGCGCACGGCACCTTCTACACATCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR CCA 90 bp GGCCGGTGGATGGAGAGCGAAAGTCGGGGATGCCTGCGGATGTGGAGATTCCAGAGCAGACGCTCCTTCTaGCTGCCCAGGCTGAGCGTC +
Preference number: 4 (lower is better)
Translates to: GRWMESESRGCLRMWRFQSRRSF*LPRLSV
Trigger: GACGCTCAGCCTGGGCAGCCAGAAGGAGCGTCTGCT...CTGGAATCTCCACATCCGCAGGCATCCCCGACTTTCGCTCTCCATCCACCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000423526.5
ENST00000443898.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
ENST00000635694.1
CDS-3UTR CCA 90 bp CCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGGCTCAGCTGTAGCAGACGCTCCTTCTaGCTGCCCAGGCTGAGCGTC +
Preference number: 4 (lower is better)
Translates to: PDKNCWLRGGQARLGLSCSRRSF*LPRLSV
Trigger: GACGCTCAGCCTGGGCAGCCAGAAGGAGCGTCTGCT...ACAGCTGAGCCCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp ACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGGAGGGCCAGGCAGCCCTaGTCGCATTCACCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: TPPTLGVGYIQRPTPTLGRARQP*SHSPSQ
Trigger: CTGGCTGGGTGAATGCGACCAGGGCTGCCTGGCCCT...CCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp TGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTACCCCCGCCCCCGACTaGGCATCTATGCTGGCGTGC +
Preference number: 4 (lower is better)
Translates to: CSELPRQELLVKRGPGPVTPAPD*ASMLAC
Trigger: GCACGCCAGCATAGATGCCCAGTCGGGGGCGGGGGT...AACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGGCTCAGCTGGTGGCGGGGACTTCTTaGGGGAAGCTGAAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PRQELLVKRGPGPVGAQLVAGTS*GKLKCW
Trigger: CCAGCACTTCAGCTTCCCCCAAGAAGTCCCCGCCAC...CAGCTGAGCCCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp AGTGGGTCCCACGTGAAGGGGGCCCACCACCCACTTTGGGAGCTGAAGGCAGAGGTGGCGGGGACTTCTTaGGGGAAGCTGAAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SGSHVKGAHHPLWELKAEVAGTS*GKLKCW
Trigger: CCAGCACTTCAGCTTCCCCCAAGAAGTCCCCGCCAC...CTCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCCCCCTTCACGTGGGACCCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGGCTCAGCTGTCTCGTCCTTGGCAGGTaGCGGGGACTTCTTGGGGGA +
Preference number: 4 (lower is better)
Translates to: PDKNCWLRGGQARLGLSCLVLGR*RGLLGG
Trigger: TCCCCCAAGAAGTCCCCGCCACCTGCCAAGGACGAG...ACAGCTGAGCCCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCACTCGTCCTTGGCAGGTaGCGGGGACTTCTTGGGGGA +
Preference number: 4 (lower is better)
Translates to: PSRLRLPLRWVWVIFRGPLVLGR*RGLLGG
Trigger: TCCCCCAAGAAGTCCCCGCCACCTGCCAAGGACGAG...TGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp TCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGCTCGTCCTTGGCAGGTaGCGGGGACTTCTTGGGGGA +
Preference number: 4 (lower is better)
Translates to: SELPRQELLVKRGPGPVGLVLGR*RGLLGG
Trigger: TCCCCCAAGAAGTCCCCGCCACCTGCCAAGGACGAG...CCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCATCCTGGCCTCGTCCTTaGCAGGTGGCGGGGACTTCT +
Preference number: 4 (lower is better)
Translates to: PSRLRLPLRWVWVIFRGPSWPRP*QVAGTS
Trigger: AGAAGTCCCCGCCACCTGCCAAGGACGAGGCCAGGA...TGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp AGTGGGTCCCACGTGAAGGGGGCCCACCACCCACTTTGGGAGCTGAAGGCAGAGCCCTCTCTGTTGTCCTaGCCTCGTCCTTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SGSHVKGAHHPLWELKAEPSLLS*PRPWQV
Trigger: CACCTGCCAAGGACGAGGCCAGGACAACAGAGAGGG...CTCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCCCCCTTCACGTGGGACCCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GTTGGGGCTCAGCTGTCCCTGAGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTCCAGACAAGAACTGCTaGTTAAGAGGGGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: VGAQLSLRSSASRLGDAAPDKNC*LRGGQA
Trigger: GGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGG...AGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCCCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCAGTAGCCCTGGCCCCGTaGGGGCAGTTAGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: PSRLRLPLRWVWVIFRGPVALAP*GQLEMR
Trigger: CCTCATCTCTAACTGCCCCCACGGGGCCAGGGCTAC...TGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp TCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGGTAGCCCTGGCCCCGTaGGGGCAGTTAGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: SELPRQELLVKRGPGPVGVALAP*GQLEMR
Trigger: CCTCATCTCTAACTGCCCCCACGGGGCCAGGGCTAC...CCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp AGTGGGTCCCACGTGAAGGGGGCCCACCACCCACTTTGGGAGCTGAAGGCAGAGATCCAGCATGGGAAGTaGGTCCCACGTGAAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SGSHVKGAHHPLWELKAEIQHGK*VPREGG
Trigger: GCCCCCTTCACGTGGGACCCACTTCCCATGCTGGAT...CTCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCCCCCTTCACGTGGGACCCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCATCCAGCATGGGAAGTaGGTCCCACGTGAAGGGGGC +
Preference number: 4 (lower is better)
Translates to: ALPAQTPPTLGVGYIQRPIQHGK*VPREGG
Trigger: GCCCCCTTCACGTGGGACCCACTTCCCATGCTGGAT...GGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp CTGTCCCTGAGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTGTCACTGGGGTTCTCCCACCAAACAGATaGCTCTGCGACAGCGTTCGC +
Preference number: 4 (lower is better)
Translates to: LSLRSSASRLGDAAVTGVLPPNR*LCDSVR
Trigger: GCGAACGCTGTCGCAGAGTCATCTGTTTGGTGGGAG...AACCCCAGTGACAGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
CDS-3UTR TCA 90 bp CCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCAGGCGCTGACGCAGTGTaGTGTGTAGAAGGTGCCGTG +
Preference number: 4 (lower is better)
Translates to: PSRLRLPLRWVWVIFRGPGADAV*CVEGAV
Trigger: CACGGCACCTTCTACACATCACACTGCGTCAGCGCC...TGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp CCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGGCTCAGCTGTGGCGCTGACGCAGTGTaGTGTGTAGAAGGTGCCGTG +
Preference number: 4 (lower is better)
Translates to: PDKNCWLRGGQARLGLSCGADAV*CVEGAV
Trigger: CACGGCACCTTCTACACATCACACTGCGTCAGCGCC...ACAGCTGAGCCCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp CCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCAGCAAGGAGGTACCCATaGCCAGGAGGAGGTCCACCT +
Preference number: 4 (lower is better)
Translates to: PSRLRLPLRWVWVIFRGPARRYP*PGGGPP
Trigger: AGGTGGACCTCCTCCTGGTCATGGGTACCTCCTTGC...TGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp GTGGGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGGGGCTCAGCTGTCCCTaGGGAGCTCGGCATCCCGCC +
Preference number: 4 (lower is better)
Translates to: VGAVRDEGGYSLAQEWLEGLSCP*GARHPA
Trigger: GGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCC...CTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp GTGCGCCTCCACCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCGACTGCTCTGTCCCGTaGCGGCACCAGAAATGGGAG +
Preference number: 4 (lower is better)
Translates to: VRLHQVLLFQPGYSLQGIDCSVP*RHQKWE
Trigger: CTCCCATTTCTGGTGCCGTCACGGGACAGAGCAGTC...GATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGGTGGAGGCGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR GCA 90 bp ATCCAGCTTAGCGGGTATTCGTGCCGGCAGCTGGCGCTGACGCAGTGTGATGTGAGAGGGGTCTGGCTCTaGCATGGGCGCGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: IQLSGYSCRQLALTQCDVRGVWL*HGRGAE
Trigger: TTCAGCACCGCGCCCATGGCAGAGCCAGACCCCTCT...CACATCACACTGCGTCAGCGCCAGCTGCCGGCACGAATACCCGCTAAGCTGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
CDS-3UTR GCA 90 bp CCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGGCTCAGCTGCAGGAAGTCCATGTCTaGTTCTCCACCAGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: PRQELLVKRGPGPVGAQLQEVHV*FSTSGS
Trigger: GGAGCCGCTGGTGGAGAAGCAGACATGGACTTCCTG...CAGCTGAGCCCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp ACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGGCGACAGCGTTCGCTCTaGATGTACCGGGCCACCCCT +
Preference number: 4 (lower is better)
Translates to: TPPTLGVGYIQRPTPTLGRQRSL*MYRATP
Trigger: AGGGGTGGCCCGGTACATGCAGAGCGAACGCTGTCG...CCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp GGATGGAGAGCGAAAGTCGGGGATGCCTGCGGATGTGGAGATTCCAGCTCCCACCGACAGCGTTCGCTCTaGATGTACCGGGCCACCCCT +
Preference number: 4 (lower is better)
Translates to: GWRAKVGDACGCGDSSSHRQRSL*MYRATP
Trigger: AGGGGTGGCCCGGTACATGCAGAGCGAACGCTGTCG...GTGGGAGCTGGAATCTCCACATCCGCAGGCATCCCCGACTTTCGCTCTCCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
CDS-3UTR GCA 90 bp GTTGGGGCTCAGCTGTCCCTGAGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTAAAGTCGGGGATGCCTaGGGATGTGGAGATTCCAGC +
Preference number: 4 (lower is better)
Translates to: VGAQLSLRSSASRLGDAAKVGDA*GCGDSS
Trigger: GCTGGAATCTCCACATCCGCAGGCATCCCCGACTTT...AGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp CGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAAGGGAGGCAAAGGGCTaGACCTGCAAGGAGGTACCC +
Preference number: 4 (lower is better)
Translates to: REPSRLRLPLRWVWVIFRREAKG*TCKEVP
Trigger: GGGTACCTCCTTGCAGGTGCAGCCCTTTGCCTCCCT...TCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249396.12
ENST00000392081.6
ENST00000634533.2
ENST00000635478.1
CDS-3UTR GCA 90 bp CCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCAGCATCTATGCTGGCGTaGTCCCTCCGGACAAGGTCC +
Preference number: 4 (lower is better)
Translates to: PSRLRLPLRWVWVIFRGPASMLA*SLRTRS
Trigger: GGACCTTGTCCGGAGGGAGCACGCCAGCATAGATGC...TGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp CCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGGCTCAGCTGTGCATCTATGCTGGCGTaGTCCCTCCGGACAAGGTCC +
Preference number: 4 (lower is better)
Translates to: PDKNCWLRGGQARLGLSCASMLA*SLRTRS
Trigger: GGACCTTGTCCGGAGGGAGCACGCCAGCATAGATGC...ACAGCTGAGCCCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp CTGTCCCTGAGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTGTCACTGGGGTTATCCCGCCTGGGAGATaGAGCTGTCACTGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: LSLRSSASRLGDAAVTGVIPPGR*SCHWGF
Trigger: GAAACCCCAGTGACAGCTGCATCTCCCAGGCGGGAT...AACCCCAGTGACAGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
CDS-3UTR GCA 90 bp GTTGGGGCTCAGCTGTCCCTGAGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTTCCCCAGACAAGAACTaGTGGTTAAGAGGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: VGAQLSLRSSASRLGDAASPDKN*WLRGGQ
Trigger: CTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGA...AGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCCCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp GGGCCAGGCCCGGTTGGGGCTCAGCTGTCCCTGAGGAGCTCGGCATCCCGCCTGATAAGCAATGTCTTCTaGCCATCCAGCATGGGAAGT +
Preference number: 4 (lower is better)
Translates to: GPGPVGAQLSLRSSASRLISNVF*PSSMGS
Trigger: ACTTCCCATGCTGGATGGGCAGAAGACATTGCTTAT...CAGGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCCCAACCGGGCCTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp AGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGGGGGCAGGAGACAGAGTGGAGGGTGAGAGGGGTCTaGCTCTGCCATGGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: RLGMVYLATGPRGQETEWRVRGV*LCHGRG
Trigger: ACCGCGCCCATGGCAGAGCCAGACCCCTCTCACCCT...CCACTCTGTCTCCTGCCCCCGGGGGCCTGTGGCTAAGTAAACCATACCTAACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000249396.12
ENST00000634533.2
CDS-3UTR CCA 90 bp CCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGGCTCAGCTGCCCAGGCTGAGCGTCTaGGAGAATAAGTTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: PRQELLVKRGPGPVGAQLPRLSV*ENKFRR
Trigger: CCTGCGGAACTTATTCTCCCAGACGCTCAGCCTGGG...CAGCTGAGCCCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GTCATAGAGGCCGGTGGATGGAGAGCGAAAGTCGGGGATGCCTGCGGATGTGGAAGCAGACGCTCCTTCTaGCTGCCCAGGCTGAGCGTC +
Preference number: 4 (lower is better)
Translates to: VIEAGGWRAKVGDACGCGSRRSF*LPRLSV
Trigger: GACGCTCAGCCTGGGCAGCCAGAAGGAGCGTCTGCT...TCCACATCCGCAGGCATCCCCGACTTTCGCTCTCCATCCACCGGCCTCTATGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000423526.5
ENST00000443898.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
ENST00000635694.1
CDS-3UTR CCA 90 bp GCAGAGACTCGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTCCCTGTAGGCCTTCTTaGAGTCAAAGTCCATGCCTC +
Preference number: 4 (lower is better)
Translates to: AETREPSRLRLPLRWVWVPCRPS*SQSPCL
Trigger: GAGGCATGGACTTTGACTCCAAGAAGGCCTACAGGG...AACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCGAGTCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249396.12
ENST00000392081.6
ENST00000634533.2
ENST00000635478.1
CDS-3UTR CCA 90 bp AGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGGGGGCAGGAGACAGAGTGGAGGGCCAGGCAGCCCTaGTCGCATTCACCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: RLGMVYLATGPRGQETEWRARQP*SHSPSQ
Trigger: CTGGCTGGGTGAATGCGACCAGGGCTGCCTGGCCCT...CCACTCTGTCTCCTGCCCCCGGGGGCCTGTGGCTAAGTAAACCATACCTAACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp AGTGGGTCCCACGTGAAGGGGGCCCACCACCCACTTTGGGAGCTGAAGGCAGAGACTGGGCATCTATGCTaGCGTGCTCCCTCCGGACAA +
Preference number: 4 (lower is better)
Translates to: SGSHVKGAHHPLWELKAETGHLC*RAPSGQ
Trigger: TTGTCCGGAGGGAGCACGCCAGCATAGATGCCCAGT...CTCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCCCCCTTCACGTGGGACCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GGGCCCGAAGCTCCCTGTCCTGGAAGAGTTAAAAGTTCTGGGGTAGCCCTGGCCCTCGTCCTTGGCAGGTaGCGGGGACTTCTTGGGGGA +
Preference number: 4 (lower is better)
Translates to: GPEAPCPGRVKSSGVALALVLGR*RGLLGG
Trigger: TCCCCCAAGAAGTCCCCGCCACCTGCCAAGGACGAG...GGCCAGGGCTACCCCAGAACTTTTAACTCTTCCAGGACAGGGAGCTTCGGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp AAGTGGGTCCCACGTGAAGGGGGCCCACCACCCACTTTGGGAGCTGAAGGCAGACCCTCTCTGTTGTCCTaGCCTCGTCCTTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: KWVPREGGPPPTLGAEGRPSLLS*PRPWQV
Trigger: CACCTGCCAAGGACGAGGCCAGGACAACAGAGAGGG...TCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCCCCCTTCACGTGGGACCCACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp TCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGCCCTCTCTGTTGTCCTaGCCTCGTCCTTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SELPRQELLVKRGPGPVGPSLLS*PRPWQV
Trigger: CACCTGCCAAGGACGAGGCCAGGACAACAGAGAGGG...CCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCACCCTCTCTGTTGTCCTaGCCTCGTCCTTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: PSRLRLPLRWVWVIFRGPPSLLS*PRPWQV
Trigger: CACCTGCCAAGGACGAGGCCAGGACAACAGAGAGGG...TGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CACCCACACTGGGGTAGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGGGGGGCTCGGCATCCCGCCTaGGAGATGCAGCTGTCACTG +
Preference number: 4 (lower is better)
Translates to: HPHWGRLGMVYLATGPRGARHPA*EMQLSL
Trigger: CAGTGACAGCTGCATCTCCCAGGCGGGATGCCGAGC...CCCCCGGGGGCCTGTGGCTAAGTAAACCATACCTAACCTACCCCAGTGTGGGTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GTTGGGGCTCAGCTGTCCCTGAGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTGTGTTAGAGATTTGCTaGGGTTGGGGGCCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: VGAQLSLRSSASRLGDAAVLEIC*GWGPGL
Trigger: CAACCCTGGCCCCCAACCCCAGCAAATCTCTAACAC...AGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCCCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GTTGGGGCTCAGCTGTCCCTGAGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTGGCCCACACCCACACTaGGGTAGGTTAGGTATGGTT +
Preference number: 4 (lower is better)
Translates to: VGAQLSLRSSASRLGDAAGPHPH*GRLGMV
Trigger: AACCATACCTAACCTACCCCAGTGTGGGTGTGGGCC...AGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAATCCAGCATGGGAAGTaGGTCCCACGTGAAGGGGGC +
Preference number: 4 (lower is better)
Translates to: REPSRLRLPLRWVWVIFRIQHGK*VPREGG
Trigger: GCCCCCTTCACGTGGGACCCACTTCCCATGCTGGAT...TCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp AAGTGGGTCCCACGTGAAGGGGGCCCACCACCCACTTTGGGAGCTGAAGGCAGAGAGTCCCAGAAGGCGTaGCGTCAGCAGCCATGTTGG +
Preference number: 4 (lower is better)
Translates to: KWVPREGGPPPTLGAEGRESQKA*RQQPCW
Trigger: CCAACATGGCTGCTGACGCCACGCCTTCTGGGACTC...TCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCCCCCTTCACGTGGGACCCACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358931.9
ENST00000392081.6
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGGCTCAGCTGTGAATCTGAGTCGGTCTaGCTCTGCCATGGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: PDKNCWLRGGQARLGLSCESESV*LCHGRG
Trigger: ACCGCGCCCATGGCAGAGCCAGACCGACTCAGATTC...ACAGCTGAGCCCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358931.9
ENST00000392081.6
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp AAGTGGGTCCCACGTGAAGGGGGCCCACCACCCACTTTGGGAGCTGAAGGCAGACTCCCACCAAACAGATaGCTCTGCGACAGCGTTCGC +
Preference number: 4 (lower is better)
Translates to: KWVPREGGPPPTLGAEGRLPPNR*LCDSVR
Trigger: GCGAACGCTGTCGCAGAGTCATCTGTTTGGTGGGAG...TCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCCCCCTTCACGTGGGACCCACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp TGGGGCTCAGCTGTCCCTGAGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTGTCCTTCAGCAGGCGCATaGAGTAGTGACAGATGGTTG +
Preference number: 4 (lower is better)
Translates to: WGSAVPEELGIPPGRCSCPSAGA*SSDRWL
Trigger: CAACCATCTGTCACTACTTCATGCGCCTGCTGAAGG...ACAGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
CDS-3UTR TCA 90 bp ACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGGGGCGCTGACGCAGTGTaGTGTGTAGAAGGTGCCGTG +
Preference number: 4 (lower is better)
Translates to: TPPTLGVGYIQRPTPTLGGADAV*CVEGAV
Trigger: CACGGCACCTTCTACACATCACACTGCGTCAGCGCC...CCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp CAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGCCGGCAGCTGGCGCTaGCGCAGTGTGATGTGTAGA +
Preference number: 4 (lower is better)
Translates to: QTPPTLGVGYIQRPTPTLAGSWR*RSVMCR
Trigger: TCTACACATCACACTGCGTCAGCGCCAGCTGCCGGC...CAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp GGGCCCGAAGCTCCCTGTCCTGGAAGAGTTAAAAGTTCTGGGGTAGCCCTGGCCGCAAGGAGGTACCCATaGCCAGGAGGAGGTCCACCT +
Preference number: 4 (lower is better)
Translates to: GPEAPCPGRVKSSGVALAARRYP*PGGGPP
Trigger: AGGTGGACCTCCTCCTGGTCATGGGTACCTCCTTGC...GGCCAGGGCTACCCCAGAACTTTTAACTCTTCCAGGACAGGGAGCTTCGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp GGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGACAGGGCTCAGCTGTCCCTaGGGAGCTCGGCATCCCGCC +
Preference number: 4 (lower is better)
Translates to: GAVRDEGGYSLAQEWLETGLSCP*GARHPA
Trigger: GGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCC...TGTCTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp CGAAAGTCGGGGATGCCTGCGGATGTGGAGATTCCAGCTCCCACCAAACAGATGGGCAGGAAGGTGGCCTaGGCCTCCTGCACCTTCCCT +
Preference number: 4 (lower is better)
Translates to: RKSGMPADVEIPAPTKQMGRKVA*ASCTFP
Trigger: AGGGAAGGTGCAGGAGGCTCAGGCCACCTTCCTGCC...CATCTGTTTGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCCCCGACTTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
CDS-3UTR TCA 90 bp TCGGGGATGCCTGCGGATGTGGAGATTCCAGCTCCCACCAAACAGATGACTCTGGGCAGGAAGGTGGCCTaGGCCTCCTGCACCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SGMPADVEIPAPTKQMTLGRKVA*ASCTFP
Trigger: AGGGAAGGTGCAGGAGGCTCAGGCCACCTTCCTGCC...CAGAGTCATCTGTTTGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
CDS-3UTR GCA 90 bp TGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTAGAGGGGTCTGGCTCTaGCATGGGCGCGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: CSELPRQELLVKRGPGPVRGVWL*HGRGAE
Trigger: TTCAGCACCGCGCCCATGGCAGAGCCAGACCCCTCT...AACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000249396.12
ENST00000634533.2
CDS-3UTR GCA 90 bp AGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGGGGGCAGGAGACAGAGTGGCTCCTGCACCTTCCCTaGCTGGGTCTCCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: RLGMVYLATGPRGQETEWLLHLP*LGLQRV
Trigger: CACCCTCTGGAGACCCAGGCAGGGAAGGTGCAGGAG...CCACTCTGTCTCCTGCCCCCGGGGGCCTGTGGCTAAGTAAACCATACCTAACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000249396.12
ENST00000634533.2
CDS-3UTR GCA 90 bp AAGTGGGTCCCACGTGAAGGGGGCCCACCACCCACTTTGGGAGCTGAAGGCAGACAGGAAGTCCATGTCTaGTTCTCCACCAGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: KWVPREGGPPPTLGAEGRQEVHV*FSTSGS
Trigger: GGAGCCGCTGGTGGAGAAGCAGACATGGACTTCCTG...TCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCCCCCTTCACGTGGGACCCACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp CGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGACAGGAAGTCCATGTCTaGTTCTCCACCAGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: REPSRLRLPLRWVWVIFRQEVHV*FSTSGS
Trigger: GGAGCCGCTGGTGGAGAAGCAGACATGGACTTCCTG...TCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp CAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGCGACAGCGTTCGCTCTaGATGTACCGGGCCACCCCT +
Preference number: 4 (lower is better)
Translates to: QTPPTLGVGYIQRPTPTLRQRSL*MYRATP
Trigger: AGGGGTGGCCCGGTACATGCAGAGCGAACGCTGTCG...CAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp GGCCCACACCCACACTGGGGTAGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGACAGCGTTCGCTCTaGATGTACCGGGCCACCCCT +
Preference number: 4 (lower is better)
Translates to: GPHPHWGRLGMVYLATGPRQRSL*MYRATP
Trigger: AGGGGTGGCCCGGTACATGCAGAGCGAACGCTGTCG...GGGGCCTGTGGCTAAGTAAACCATACCTAACCTACCCCAGTGTGGGTGTGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp CTCTGTTGTCCTGGCCTCGTCCTTGGCAGGTGGCGGGGACTTCTTGGGGGAAGCAAAGTCGGGGATGCCTaGGGATGTGGAGATTCCAGC +
Preference number: 4 (lower is better)
Translates to: LCCPGLVLGRWRGLLGGSKVGDA*GCGDSS
Trigger: GCTGGAATCTCCACATCCGCAGGCATCCCCGACTTT...GCTTCCCCCAAGAAGTCCCCGCCACCTGCCAAGGACGAGGCCAGGACAACAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
CDS-3UTR GCA 90 bp AAGGTGCCGTGCGCCTCCACCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAAAGTCGGGGATGCCTaGGGATGTGGAGATTCCAGC +
Preference number: 4 (lower is better)
Translates to: KVPCASTKSSCSSPAIRSKVGDA*GCGDSS
Trigger: GCTGGAATCTCCACATCCGCAGGCATCCCCGACTTT...GGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGGTGGAGGCGCACGGCACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR GCA 90 bp AGTAGTGACAGATGGTTGGCCCCAGGGAACCGTCACAGCAGCCGCGTCGGGGAGAGCGAAAGTCGGGGATaGCTGCGGATGTGGAGATTC +
Preference number: 4 (lower is better)
Translates to: SSDRWLAPGNRHSSRVGESESRG*LRMWRF
Trigger: GAATCTCCACATCCGCAGGCATCCCCGACTTTCGCT...CTCCCCGACGCGGCTGCTGTGACGGTTCCCTGGGGCCAACCATCTGTCACTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420440.5
ENST00000635486.1
CDS-3UTR GCA 90 bp CCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGGCTCAGCTGGTGATGTGTAGAAGGTaGCGTGCGCCTCCACCAAGT +
Preference number: 4 (lower is better)
Translates to: PRQELLVKRGPGPVGAQLVMCRR*RAPPPS
Trigger: ACTTGGTGGAGGCGCACGGCACCTTCTACACATCAC...CAGCTGAGCCCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp TGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTCTTAGCGGGTATTCGTaGCGGCAGCTGGCGCTGACG +
Preference number: 4 (lower is better)
Translates to: CSELPRQELLVKRGPGPVLSGYS*RQLALT
Trigger: CGTCAGCGCCAGCTGCCGGCACGAATACCCGCTAAG...AACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp GGGCCCGAAGCTCCCTGTCCTGGAAGAGTTAAAAGTTCTGGGGTAGCCCTGGCCAGGGAGGCAAAGGGCTaGACCTGCAAGGAGGTACCC +
Preference number: 4 (lower is better)
Translates to: GPEAPCPGRVKSSGVALAREAKG*TCKEVP
Trigger: GGGTACCTCCTTGCAGGTGCAGCCCTTTGCCTCCCT...GGCCAGGGCTACCCCAGAACTTTTAACTCTTCCAGGACAGGGAGCTTCGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000249396.12
ENST00000392081.6
ENST00000634533.2
ENST00000635478.1
CDS-3UTR GCA 90 bp CACCCACACTGGGGTAGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGGGGGGCATCTATGCTGGCGTaGTCCCTCCGGACAAGGTCC +
Preference number: 4 (lower is better)
Translates to: HPHWGRLGMVYLATGPRGASMLA*SLRTRS
Trigger: GGACCTTGTCCGGAGGGAGCACGCCAGCATAGATGC...CCCCCGGGGGCCTGTGGCTAAGTAAACCATACCTAACCTACCCCAGTGTGGGTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp TGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTCCGACTGGGCATCTATaGTGGCGTGCTCCCTCCGGA +
Preference number: 4 (lower is better)
Translates to: CSELPRQELLVKRGPGPVPTGHL*WRAPSG
Trigger: TCCGGAGGGAGCACGCCAGCATAGATGCCCAGTCGG...AACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp CGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAATCCCGCCTGGGAGATaGAGCTGTCACTGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: REPSRLRLPLRWVWVIFRIPPGR*SCHWGF
Trigger: GAAACCCCAGTGACAGCTGCATCTCCCAGGCGGGAT...TCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp CCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCAGAGGTGTTAGAGATTTaGTGGGGTTGGGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PSRLRLPLRWVWVIFRGPEVLEI*WGWGPG
Trigger: CCCTGGCCCCCAACCCCAGCAAATCTCTAACACCTC...TGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp TCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGACTCTCAGCAGACATTaGGGCCGCAGACGCGCTTTC +
Preference number: 4 (lower is better)
Translates to: SELPRQELLVKRGPGPVGTLSRH*GRRRAF
Trigger: GAAAGCGCGTCTGCGGCCGCAATGTCTGCTGAGAGT...CCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358931.9
ENST00000392081.6
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp AGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGGGGGCAGGAGACAGAGTGGGAGTCGGTCTGGCTCTaGCATGGGCGCGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: RLGMVYLATGPRGQETEWESVWL*HGRGAE
Trigger: TTCAGCACCGCGCCCATGGCAGAGCCAGACCGACTC...CCACTCTGTCTCCTGCCCCCGGGGGCCTGTGGCTAAGTAAACCATACCTAACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358931.9
ENST00000392081.6
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp CAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGAGTCGGTCTGGCTCTaGCATGGGCGCGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: QTPPTLGVGYIQRPTPTLESVWL*HGRGAE
Trigger: TTCAGCACCGCGCCCATGGCAGAGCCAGACCGACTC...CAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358931.9
ENST00000392081.6
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTATGTTCTGCGAGGGTGAGAGGGGTCTaGCTCTGCCATGGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: PSPPVPARLFAPGYLCSARVRGV*LCHGRG
Trigger: ACCGCGCCCATGGCAGAGCCAGACCCCTCTCACCCT...CGCAGAACATAGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
CDS-3UTR CCA 90 bp AGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGGGGGCAGGAGACAGAGTGGAGCAGACGCTCCTTCTaGCTGCCCAGGCTGAGCGTC +
Preference number: 4 (lower is better)
Translates to: RLGMVYLATGPRGQETEWSRRSF*LPRLSV
Trigger: GACGCTCAGCCTGGGCAGCCAGAAGGAGCGTCTGCT...CCACTCTGTCTCCTGCCCCCGGGGGCCTGTGGCTAAGTAAACCATACCTAACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGATGCCTGCGGATGTaGAGATTCCAGCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: REPSRLRLPLRWVWVIFRGCLRM*RFQLPP
Trigger: TGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCC...TCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCATAGAGGCCGGTGGATaGAGAGCGAAAGTCGGGGAT +
Preference number: 4 (lower is better)
Translates to: ALPAQTPPTLGVGYIQRPIEAGG*RAKVGD
Trigger: ATCCCCGACTTTCGCTCTCCATCCACCGGCCTCTAT...GGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CCCAGGCTAAAAGATGGCTGCAGACAGCTGCTCGCCTGCCGCAGGAGAGGGAGGATAGAGGCCGGTGGATaGAGAGCGAAAGTCGGGGAT +
Preference number: 4 (lower is better)
Translates to: PRLKDGCRQLLACRRRGRIEAGG*RAKVGD
Trigger: ATCCCCGACTTTCGCTCTCCATCCACCGGCCTCTAT...CCTCCCTCTCCTGCGGCAGGCGAGCAGCTGTCTGCAGCCATCTTTTAGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423526.5
ENST00000634761.1
CDS-3UTR CCA 90 bp GTCCCTGAGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTGTCACTGGGGTTTCTGTCATAGAGGCCGGTaGATGGAGAGCGAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: VPEELGIPPGRCSCHWGFCHRGR*MESESR
Trigger: CCGACTTTCGCTCTCCATCCACCGGCCTCTATGACA...GAAACCCCAGTGACAGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
CDS-3UTR CCA 90 bp GTTGGGGCTCAGCTGTCCCTGAGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTCCCTGTAGGCCTTCTTaGAGTCAAAGTCCATGCCTC +
Preference number: 4 (lower is better)
Translates to: VGAQLSLRSSASRLGDAAPCRPS*SQSPCL
Trigger: GAGGCATGGACTTTGACTCCAAGAAGGCCTACAGGG...AGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249396.12
ENST00000392081.6
ENST00000634533.2
ENST00000635478.1
CDS-3UTR CCA 90 bp TGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTCTCGTCCTTGGCAGGTaGCGGGGACTTCTTGGGGGA +
Preference number: 4 (lower is better)
Translates to: CSELPRQELLVKRGPGPVLVLGR*RGLLGG
Trigger: TCCCCCAAGAAGTCCCCGCCACCTGCCAAGGACGAG...AACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GCAGAGACTCGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTAGATGCAGCTGTCACTaGGGTTTCTCCCTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: AETREPSRLRLPLRWVWVRCSCH*GFSLSV
Trigger: AACAGAGAGGGAGAAACCCCAGTGACAGCTGCATCT...AACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCGAGTCTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCACCAGACAAGAACTGCTaGTTAAGAGGGGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PSRLRLPLRWVWVIFRGPPDKNC*LRGGQA
Trigger: GGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGG...TGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp ACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGGGAGATTTGCTGGGGTTaGGGGCCAGGGTTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: TPPTLGVGYIQRPTPTLGEICWG*GPGLLG
Trigger: TCCCAGCAACCCTGGCCCCCAACCCCAGCAAATCTC...CCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GTCCCTGAGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTGTCACTGGGGTTTCGTGTTAGAGATTTGCTaGGGTTGGGGGCCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: VPEELGIPPGRCSCHWGFVLEIC*GWGPGL
Trigger: CAACCCTGGCCCCCAACCCCAGCAAATCTCTAACAC...GAAACCCCAGTGACAGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
CDS-3UTR CCA 90 bp CAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGTAGCCCTGGCCCCGTaGGGGCAGTTAGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: QTPPTLGVGYIQRPTPTLVALAP*GQLEMR
Trigger: CCTCATCTCTAACTGCCCCCACGGGGCCAGGGCTAC...CAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CTCTGTTGTCCTGGCCTCGTCCTTGGCAGGTGGCGGGGACTTCTTGGGGGAAGCGGCCCACACCCACACTaGGGTAGGTTAGGTATGGTT +
Preference number: 4 (lower is better)
Translates to: LCCPGLVLGRWRGLLGGSGPHPH*GRLGMV
Trigger: AACCATACCTAACCTACCCCAGTGTGGGTGTGGGCC...GCTTCCCCCAAGAAGTCCCCGCCACCTGCCAAGGACGAGGCCAGGACAACAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
CDS-3UTR CCA 90 bp GCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCGGCCCACACCCACACTaGGGTAGGTTAGGTATGGTT +
Preference number: 4 (lower is better)
Translates to: ALPAQTPPTLGVGYIQRPGPHPH*GRLGMV
Trigger: AACCATACCTAACCTACCCCAGTGTGGGTGTGGGCC...GGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CTGTCCCTGAGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTGTCACTGGGGTTCCCCTACGCTGGGTGTaGGTTATATTCAGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: LSLRSSASRLGDAAVTGVPLRWV*VIFRGP
Trigger: TGGGCCTCTGAATATAACCCACACCCAGCGTAGGGG...AACCCCAGTGACAGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
CDS-3UTR CCA 90 bp GCAGAGACTCGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTAGACTCCCCCTACGCTaGGTGTGGGTTATATTCAGA +
Preference number: 4 (lower is better)
Translates to: AETREPSRLRLPLRWVWVRLPLR*VWVIFR
Trigger: TCTGAATATAACCCACACCCAGCGTAGGGGGAGTCT...AACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCGAGTCTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GGATGGAGAGCGAAAGTCGGGGATGCCTGCGGATGTGGAGATTCCAGCTCCCACGAATCTGAGTCGGTCTaGCTCTGCCATGGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: GWRAKVGDACGCGDSSSHESESV*LCHGRG
Trigger: ACCGCGCCCATGGCAGAGCCAGACCGACTCAGATTC...GTGGGAGCTGGAATCTCCACATCCGCAGGCATCCCCGACTTTCGCTCTCCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423526.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
CDS-3UTR CCA 90 bp CTAGGTTGTCATAGAGGCCGGTGGATGGAGAGCGAAAGTCGGGGATGCCTGCGGGAATCTGAGTCGGTCTaGCTCTGCCATGGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: LGCHRGRWMESESRGCLRESESV*LCHGRG
Trigger: ACCGCGCCCATGGCAGAGCCAGACCGACTCAGATTC...CCGCAGGCATCCCCGACTTTCGCTCTCCATCCACCGGCCTCTATGACAACCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423526.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
CDS-3UTR CCA 90 bp AGTAGTGACAGATGGTTGGCCCCAGGGAACCGTCACAGCAGCCGCGTCGGGGAGGTAGTGACAGATGGTTaGCCCCAGGGAACCGTCACA +
Preference number: 4 (lower is better)
Translates to: SSDRWLAPGNRHSSRVGEVVTDG*PQGTVT
Trigger: TGTGACGGTTCCCTGGGGCCAACCATCTGTCACTAC...CTCCCCGACGCGGCTGCTGTGACGGTTCCCTGGGGCCAACCATCTGTCACTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420440.5
ENST00000635486.1
CDS-3UTR TCA 90 bp GAGATTGGGGGATGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGTGGGTCTCCAGAGGGTaGGAGGGGTCTGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: EIGGCSELPRQELLVKRGWVSRG*EGSGSA
Trigger: GGCAGAGCCAGACCCCTCTCACCCTCTGGAGACCCA...CCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACATCCCCCAATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000249396.12
ENST00000634533.2
CDS-3UTR TCA 90 bp GGGCCCGAAGCTCCCTGTCCTGGAAGAGTTAAAAGTTCTGGGGTAGCCCTGGCCCTCCCACCAAACAGATaGCTCTGCGACAGCGTTCGC +
Preference number: 4 (lower is better)
Translates to: GPEAPCPGRVKSSGVALALPPNR*LCDSVR
Trigger: GCGAACGCTGTCGCAGAGTCATCTGTTTGGTGGGAG...GGCCAGGGCTACCCCAGAACTTTTAACTCTTCCAGGACAGGGAGCTTCGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp GTTGGGGCTCAGCTGTCCCTGAGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTGACAGATGGTTGGCTTaGACTGCCCAGGATAGAGTT +
Preference number: 4 (lower is better)
Translates to: VGAQLSLRSSASRLGDAADRWLA*TAQDRV
Trigger: AACTCTATCCTGGGCAGTTCAAGCCAACCATCTGTC...AGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp AAGGTGCCGTGCGCCTCCACCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCCCTTCAGCAGGCGCATaGAGTAGTGACAGATGGTTG +
Preference number: 4 (lower is better)
Translates to: KVPCASTKSSCSSPAIRSPSAGA*SSDRWL
Trigger: CAACCATCTGTCACTACTTCATGCGCCTGCTGAAGG...GGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGGTGGAGGCGCACGGCACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR TCA 90 bp TGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGCGCTGACGCAGTGTaGTGTGTAGAAGGTGCCGTG +
Preference number: 4 (lower is better)
Translates to: CSELPRQELLVKRGPGPVGADAV*CVEGAV
Trigger: CACGGCACCTTCTACACATCACACTGCGTCAGCGCC...AACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp ATCCAGCTTAGCGGGTATTCGTGCCGGCAGCTGGCGCTGACGCAGTGTGATGTGGGCTTCACCAGGCTCTaGCAGTCTTCACACTTGGGC +
Preference number: 4 (lower is better)
Translates to: IQLSGYSCRQLALTQCDVGFTRL*QSSHLG
Trigger: GCCCAAGTGTGAAGACTGTCAGAGCCTGGTGAAGCC...CACATCACACTGCGTCAGCGCCAGCTGCCGGCACGAATACCCGCTAAGCTGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR TCA 90 bp GGGCCCGAAGCTCCCTGTCCTGGAAGAGTTAAAAGTTCTGGGGTAGCCCTGGCCGGCTTCACCAGGCTCTaGCAGTCTTCACACTTGGGC +
Preference number: 4 (lower is better)
Translates to: GPEAPCPGRVKSSGVALAGFTRL*QSSHLG
Trigger: GCCCAAGTGTGAAGACTGTCAGAGCCTGGTGAAGCC...GGCCAGGGCTACCCCAGAACTTTTAACTCTTCCAGGACAGGGAGCTTCGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp GGCCCACACCCACACTGGGGTAGGTTAGGTATGGTTTACTTAGCCACAGGCCCCGCAAGGAGGTACCCATaGCCAGGAGGAGGTCCACCT +
Preference number: 4 (lower is better)
Translates to: GPHPHWGRLGMVYLATGPARRYP*PGGGPP
Trigger: AGGTGGACCTCCTCCTGGTCATGGGTACCTCCTTGC...GGGGCCTGTGGCTAAGTAAACCATACCTAACCTACCCCAGTGTGGGTGTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp CCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGGCTCAGCTGGATTGGGGGATGTTCTaGGCTCCCCAGACAAGAACT +
Preference number: 4 (lower is better)
Translates to: PRQELLVKRGPGPVGAQLDWGMF*APQTRT
Trigger: AGTTCTTGTCTGGGGAGCTCAGAACATCCCCCAATC...CAGCTGAGCCCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp GGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGACAGAAGTGGGTCCCACGTaGAGGGGGCCCACCACCCAC +
Preference number: 4 (lower is better)
Translates to: GAVRDEGGYSLAQEWLETEVGPT*RGPTTH
Trigger: GTGGGTGGTGGGCCCCCTTCACGTGGGACCCACTTC...TGTCTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp TCTTTCATCCAGCTTAGCGGGTATTCGTGCCGGCAGCTGGCGCTGACGCAGTGTGACTGCTCTGTCCCGTaGCGGCACCAGAAATGGGAG +
Preference number: 4 (lower is better)
Translates to: SFIQLSGYSCRQLALTQCDCSVP*RHQKWE
Trigger: CTCCCATTTCTGGTGCCGTCACGGGACAGAGCAGTC...ACACTGCGTCAGCGCCAGCTGCCGGCACGAATACCCGCTAAGCTGGATGAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR TCA 90 bp AAGGAACAAATGCTTTGTAGCCACTGCCTGTGTTGTCTTTGGGGCCTGCCCAGGGCAGGCCTGGCTGCCTaGGGAGGGAGACAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: KEQMLCSHCLCCLWGLPRAGLAA*GGRQWQ
Trigger: CTGCCACTGTCTCCCTCCTCAGGCAGCCAGGCCTGC...CCTGGGCAGGCCCCAAAGACAACACAGGCAGTGGCTACAAAGCATTTGTTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423526.5
ENST00000634761.1
CDS-3UTR GCA 90 bp GTCATAGAGGCCGGTGGATGGAGAGCGAAAGTCGGGGATGCCTGCGGATGTGGACAGGAAGTCCATGTCTaGTTCTCCACCAGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: VIEAGGWRAKVGDACGCGQEVHV*FSTSGS
Trigger: GGAGCCGCTGGTGGAGAAGCAGACATGGACTTCCTG...TCCACATCCGCAGGCATCCCCGACTTTCGCTCTCCATCCACCGGCCTCTATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000423526.5
ENST00000443898.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
ENST00000635694.1
CDS-3UTR GCA 90 bp CTAGGTTGTCATAGAGGCCGGTGGATGGAGAGCGAAAGTCGGGGATGCCTGCGGCAGGAAGTCCATGTCTaGTTCTCCACCAGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: LGCHRGRWMESESRGCLRQEVHV*FSTSGS
Trigger: GGAGCCGCTGGTGGAGAAGCAGACATGGACTTCCTG...CCGCAGGCATCCCCGACTTTCGCTCTCCATCCACCGGCCTCTATGACAACCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000423526.5
ENST00000443898.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
ENST00000635694.1
CDS-3UTR GCA 90 bp TCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGAAAGTCGGGGATGCCTaGGGATGTGGAGATTCCAGC +
Preference number: 4 (lower is better)
Translates to: SELPRQELLVKRGPGPVGKVGDA*GCGDSS
Trigger: GCTGGAATCTCCACATCCGCAGGCATCCCCGACTTT...CCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp GTGCGCCTCCACCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCAAAGTCGGGGATGCCTaGGGATGTGGAGATTCCAGC +
Preference number: 4 (lower is better)
Translates to: VRLHQVLLFQPGYSLQGIKVGDA*GCGDSS
Trigger: GCTGGAATCTCCACATCCGCAGGCATCCCCGACTTT...GATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGGTGGAGGCGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR GCA 90 bp TCTTTGGGGCCTGCCCAGGCTAAAAGATGGCTGCAGACAGCTGCTCGCCTGCCGAGCGAAAGTCGGGGATaGCTGCGGATGTGGAGATTC +
Preference number: 4 (lower is better)
Translates to: SLGPAQAKRWLQTAARLPSESRG*LRMWRF
Trigger: GAATCTCCACATCCGCAGGCATCCCCGACTTTCGCT...CGGCAGGCGAGCAGCTGTCTGCAGCCATCTTTTAGCCTGGGCAGGCCCCAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423526.5
ENST00000634761.1
CDS-3UTR GCA 90 bp CACCCACACTGGGGTAGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGGGGGGCAAAGGGCTGCACCTaGAAGGAGGTACCCATGACC +
Preference number: 4 (lower is better)
Translates to: HPHWGRLGMVYLATGPRGAKGCT*KEVPMT
Trigger: GGTCATGGGTACCTCCTTGCAGGTGCAGCCCTTTGC...CCCCCGGGGGCCTGTGGCTAAGTAAACCATACCTAACCTACCCCAGTGTGGGTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000249396.12
ENST00000392081.6
ENST00000634533.2
ENST00000635478.1
CDS-3UTR GCA 90 bp AGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGGGGGCAGGAGACAGAGTGGAGGGAGGCAAAGGGCTaGACCTGCAAGGAGGTACCC +
Preference number: 4 (lower is better)
Translates to: RLGMVYLATGPRGQETEWREAKG*TCKEVP
Trigger: GGGTACCTCCTTGCAGGTGCAGCCCTTTGCCTCCCT...CCACTCTGTCTCCTGCCCCCGGGGGCCTGTGGCTAAGTAAACCATACCTAACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000249396.12
ENST00000392081.6
ENST00000634533.2
ENST00000635478.1
CDS-3UTR GCA 90 bp TGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGCATCTATGCTGGCGTaGTCCCTCCGGACAAGGTCC +
Preference number: 4 (lower is better)
Translates to: CSELPRQELLVKRGPGPVASMLA*SLRTRS
Trigger: GGACCTTGTCCGGAGGGAGCACGCCAGCATAGATGC...AACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp AAGTGGGTCCCACGTGAAGGGGGCCCACCACCCACTTTGGGAGCTGAAGGCAGATCCCCAGACAAGAACTaGTGGTTAAGAGGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: KWVPREGGPPPTLGAEGRSPDKN*WLRGGQ
Trigger: CTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGA...TCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCCCCCTTCACGTGGGACCCACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp CCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCATCCCCAGACAAGAACTaGTGGTTAAGAGGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PSRLRLPLRWVWVIFRGPSPDKN*WLRGGQ
Trigger: CTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGA...TGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp GTCGGGGATGCCTGCGGATGTGGAGATTCCAGCTCCCACCAAACAGATGACTCTGAGTCGGTCTGGCTCTaGCATGGGCGCGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: VGDACGCGDSSSHQTDDSESVWL*HGRGAE
Trigger: TTCAGCACCGCGCCCATGGCAGAGCCAGACCGACTC...AGAGTCATCTGTTTGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCCCCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423526.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
CDS-3UTR CCA 90 bp CGAAAGTCGGGGATGCCTGCGGATGTGGAGATTCCAGCTCCCACCAAACAGATGAGCAGACGCTCCTTCTaGCTGCCCAGGCTGAGCGTC +
Preference number: 4 (lower is better)
Translates to: RKSGMPADVEIPAPTKQMSRRSF*LPRLSV
Trigger: GACGCTCAGCCTGGGCAGCCAGAAGGAGCGTCTGCT...CATCTGTTTGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCCCCGACTTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000423526.5
ENST00000443898.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
ENST00000635694.1
CDS-3UTR CCA 90 bp CCTCCACCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTATGTAGCAGACGCTCCTTCTaGCTGCCCAGGCTGAGCGTC +
Preference number: 4 (lower is better)
Translates to: PPPSPPVPARLFAPGYLCSRRSF*LPRLSV
Trigger: GACGCTCAGCCTGGGCAGCCAGAAGGAGCGTCTGCT...ACATAGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGGTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR CCA 90 bp GGGCCCGAAGCTCCCTGTCCTGGAAGAGTTAAAAGTTCTGGGGTAGCCCTGGCCGGATGCCTGCGGATGTaGAGATTCCAGCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: GPEAPCPGRVKSSGVALAGCLRM*RFQLPP
Trigger: TGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCC...GGCCAGGGCTACCCCAGAACTTTTAACTCTTCCAGGACAGGGAGCTTCGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GATGGAGAGCGAAAGTCGGGGATGCCTGCGGATGTGGAGATTCCAGCTCCCACCGGATGCCTGCGGATGTaGAGATTCCAGCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: DGERKSGMPADVEIPAPTGCLRM*RFQLPP
Trigger: TGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCC...GGTGGGAGCTGGAATCTCCACATCCGCAGGCATCCCCGACTTTCGCTCTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000423526.5
ENST00000443898.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
ENST00000635694.1
CDS-3UTR CCA 90 bp CACCCACACTGGGGTAGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGGGGGGGATGCCTGCGGATGTaGAGATTCCAGCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: HPHWGRLGMVYLATGPRGGCLRM*RFQLPP
Trigger: TGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCC...CCCCCGGGGGCCTGTGGCTAAGTAAACCATACCTAACCTACCCCAGTGTGGGTG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp TGCGCCTCCACCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTGGATGCCTGCGGATGTaGAGATTCCAGCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: CASTKSSCSSPAIRSRVSGCLRM*RFQLPP
Trigger: TGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCC...AGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGGTGGAGGCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR CCA 90 bp CCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCATGTCATAGAGGCCGGTaGATGGAGAGCGAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: PSRLRLPLRWVWVIFRGPCHRGR*MESESR
Trigger: CCGACTTTCGCTCTCCATCCACCGGCCTCTATGACA...TGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp AAGTGGGTCCCACGTGAAGGGGGCCCACCACCCACTTTGGGAGCTGAAGGCAGATGTCATAGAGGCCGGTaGATGGAGAGCGAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: KWVPREGGPPPTLGAEGRCHRGR*MESESR
Trigger: CCGACTTTCGCTCTCCATCCACCGGCCTCTATGACA...TCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCCCCCTTCACGTGGGACCCACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGGCTCAGCTGCAGGATAGAGTTCCTTaGCGAGGGCGAAGAAGGGTT +
Preference number: 4 (lower is better)
Translates to: PRQELLVKRGPGPVGAQLQDRVP*RGRRRV
Trigger: AACCCTTCTTCGCCCTCGCCAAGGAACTCTATCCTG...CAGCTGAGCCCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GCAGAGACTCGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTGTAGTGACAGATGGTTaGCTTGAACTGCCCAGGATA +
Preference number: 4 (lower is better)
Translates to: AETREPSRLRLPLRWVWVVVTDG*LELPRI
Trigger: TATCCTGGGCAGTTCAAGCCAACCATCTGTCACTAC...AACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCGAGTCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGGCTCAGCTGAGGAAAGGGTCCGACTaGCCAGCTTTCTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: PRQELLVKRGPGPVGAQLRKGSD*PAFSLL
Trigger: CAACAAGGAGAAAGCTGGCCAGTCGGACCCTTTCCT...CAGCTGAGCCCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249396.12
ENST00000392081.6
ENST00000634533.2
ENST00000635478.1
CDS-3UTR CCA 90 bp GGGCCCGAAGCTCCCTGTCCTGGAAGAGTTAAAAGTTCTGGGGTAGCCCTGGCCACTGGGCATCTATGCTaGCGTGCTCCCTCCGGACAA +
Preference number: 4 (lower is better)
Translates to: GPEAPCPGRVKSSGVALATGHLC*RAPSGQ
Trigger: TTGTCCGGAGGGAGCACGCCAGCATAGATGCCCAGT...GGCCAGGGCTACCCCAGAACTTTTAACTCTTCCAGGACAGGGAGCTTCGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp TGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGTGGCGGGGACTTCTTaGGGGAAGCTGAAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: CSELPRQELLVKRGPGPVVAGTS*GKLKCW
Trigger: CCAGCACTTCAGCTTCCCCCAAGAAGTCCCCGCCAC...AACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp AGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGGGGGCAGGAGACAGAGTGGGAGATTTGCTGGGGTTaGGGGCCAGGGTTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: RLGMVYLATGPRGQETEWEICWG*GPGLLG
Trigger: TCCCAGCAACCCTGGCCCCCAACCCCAGCAAATCTC...CCACTCTGTCTCCTGCCCCCGGGGGCCTGTGGCTAAGTAAACCATACCTAACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp TGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGAGATTTGCTGGGGTTaGGGGCCAGGGTTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: CSELPRQELLVKRGPGPVEICWG*GPGLLG
Trigger: TCCCAGCAACCCTGGCCCCCAACCCCAGCAAATCTC...AACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGACCCCTACGCTGGGTGTaGGTTATATTCAGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: REPSRLRLPLRWVWVIFRPLRWV*VIFRGP
Trigger: TGGGCCTCTGAATATAACCCACACCCAGCGTAGGGG...TCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp TGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTATCCAGCATGGGAAGTaGGTCCCACGTGAAGGGGGC +
Preference number: 4 (lower is better)
Translates to: CSELPRQELLVKRGPGPVIQHGK*VPREGG
Trigger: GCCCCCTTCACGTGGGACCCACTTCCCATGCTGGAT...AACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp AAGTGGGTCCCACGTGAAGGGGGCCCACCACCCACTTTGGGAGCTGAAGGCAGAGGCGCCCGGAAAATGTaGGAACGGCTAGAGAGTTGT +
Preference number: 4 (lower is better)
Translates to: KWVPREGGPPPTLGAEGRGARKM*ERLESC
Trigger: ACAACTCTCTAGCCGTTCCCACATTTTCCGGGCGCC...TCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCCCCCTTCACGTGGGACCCACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358931.9
ENST00000392081.6
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp AGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGGGGGCAGGAGACAGAGTGGGAATCTGAGTCGGTCTaGCTCTGCCATGGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: RLGMVYLATGPRGQETEWESESV*LCHGRG
Trigger: ACCGCGCCCATGGCAGAGCCAGACCGACTCAGATTC...CCACTCTGTCTCCTGCCCCCGGGGGCCTGTGGCTAAGTAAACCATACCTAACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358931.9
ENST00000392081.6
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp GGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGACATGGGTCTCCAGAGGGTaGGAGGGGTCTGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GAVRDEGGYSLAQEWLETWVSRG*EGSGSA
Trigger: GGCAGAGCCAGACCCCTCTCACCCTCTGGAGACCCA...TGTCTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249396.12
ENST00000634533.2
CDS-3UTR TCA 90 bp CCCAGGATAGAGTTCCTTGGCGAGGGCGAAGAAGGGTTCCGGATGTTTCTTGAATGGGTCTCCAGAGGGTaGGAGGGGTCTGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PRIEFLGEGEEGFRMFLEWVSRG*EGSGSA
Trigger: GGCAGAGCCAGACCCCTCTCACCCTCTGGAGACCCA...TTCAAGAAACATCCGGAACCCTTCTTCGCCCTCGCCAAGGAACTCTATCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
CDS-3UTR TCA 90 bp TCTTTCATCCAGCTTAGCGGGTATTCGTGCCGGCAGCTGGCGCTGACGCAGTGTCTCCCACCAAACAGATaGCTCTGCGACAGCGTTCGC +
Preference number: 4 (lower is better)
Translates to: SFIQLSGYSCRQLALTQCLPPNR*LCDSVR
Trigger: GCGAACGCTGTCGCAGAGTCATCTGTTTGGTGGGAG...ACACTGCGTCAGCGCCAGCTGCCGGCACGAATACCCGCTAAGCTGGATGAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR TCA 90 bp CAGCCCGGCTATTCGCTCCAGGGTATCTATGTTCTGCGTGTAGCAGCGCAGGAGCTCCCACCAAACAGATaGCTCTGCGACAGCGTTCGC +
Preference number: 4 (lower is better)
Translates to: QPGYSLQGIYVLRVAAQELPPNR*LCDSVR
Trigger: GCGAACGCTGTCGCAGAGTCATCTGTTTGGTGGGAG...CTCCTGCGCTGCTACACGCAGAACATAGATACCCTGGAGCGAATAGCCGGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR TCA 90 bp GGGATGCCTGCGGATGTGGAGATTCCAGCTCCCACCAAACAGATGACTCTGCGAGGCGCTGACGCAGTGTaGTGTGTAGAAGGTGCCGTG +
Preference number: 4 (lower is better)
Translates to: GMPADVEIPAPTKQMTLRGADAV*CVEGAV
Trigger: CACGGCACCTTCTACACATCACACTGCGTCAGCGCC...TCGCAGAGTCATCTGTTTGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
CDS-3UTR TCA 90 bp ATAAGCAATGTCTTCTGCCCATCCAGCATGGGAAGTGGGTCCCACGTGAAGGGGGCCGGCAGCTGGCGCTaGCGCAGTGTGATGTGTAGA +
Preference number: 4 (lower is better)
Translates to: ISNVFCPSSMGSGSHVKGAGSWR*RSVMCR
Trigger: TCTACACATCACACTGCGTCAGCGCCAGCTGCCGGC...CCCCTTCACGTGGGACCCACTTCCCATGCTGGATGGGCAGAAGACATTGCTTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp AGAAGATCTTCTCTTTCATCCAGCTTAGCGGGTATTCGTGCCGGCAGCTGGCGCGCCGGCAGCTGGCGCTaGCGCAGTGTGATGTGTAGA +
Preference number: 4 (lower is better)
Translates to: RRSSLSSSLAGIRAGSWRAGSWR*RSVMCR
Trigger: TCTACACATCACACTGCGTCAGCGCCAGCTGCCGGC...GCGCCAGCTGCCGGCACGAATACCCGCTAAGCTGGATGAAAGAGAAGATCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR TCA 90 bp CAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGCTTCACCAGGCTCTaGCAGTCTTCACACTTGGGC +
Preference number: 4 (lower is better)
Translates to: QTPPTLGVGYIQRPTPTLGFTRL*QSSHLG
Trigger: GCCCAAGTGTGAAGACTGTCAGAGCCTGGTGAAGCC...CAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp CGAAAGTCGGGGATGCCTGCGGATGTGGAGATTCCAGCTCCCACCAAACAGATGGACTGCTCTGTCCCGTaGCGGCACCAGAAATGGGAG +
Preference number: 4 (lower is better)
Translates to: RKSGMPADVEIPAPTKQMDCSVP*RHQKWE
Trigger: CTCCCATTTCTGGTGCCGTCACGGGACAGAGCAGTC...CATCTGTTTGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCCCCGACTTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
CDS-3UTR GCA 90 bp AGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGGGGGCAGGAGACAGAGTGGCAGGAAGTCCATGTCTaGTTCTCCACCAGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: RLGMVYLATGPRGQETEWQEVHV*FSTSGS
Trigger: GGAGCCGCTGGTGGAGAAGCAGACATGGACTTCCTG...CCACTCTGTCTCCTGCCCCCGGGGGCCTGTGGCTAAGTAAACCATACCTAACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp CGCAGTGTGATGTGTAGAAGGTGCCGTGCGCCTCCACCAAGTCCTCCTGTTCCACAGGAAGTCCATGTCTaGTTCTCCACCAGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: RSVMCRRCRAPPPSPPVPQEVHV*FSTSGS
Trigger: GGAGCCGCTGGTGGAGAAGCAGACATGGACTTCCTG...TGGAACAGGAGGACTTGGTGGAGGCGCACGGCACCTTCTACACATCACACTGCG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR GCA 90 bp GGCCCACACCCACACTGGGGTAGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCAGGAAGTCCATGTCTaGTTCTCCACCAGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: GPHPHWGRLGMVYLATGPQEVHV*FSTSGS
Trigger: GGAGCCGCTGGTGGAGAAGCAGACATGGACTTCCTG...GGGGCCTGTGGCTAAGTAAACCATACCTAACCTACCCCAGTGTGGGTGTGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp GAGATTGGGGGATGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCGACAGCGTTCGCTCTaGATGTACCGGGCCACCCCT +
Preference number: 4 (lower is better)
Translates to: EIGGCSELPRQELLVKRGRQRSL*MYRATP
Trigger: AGGGGTGGCCCGGTACATGCAGAGCGAACGCTGTCG...CCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACATCCCCCAATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp ACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGGAGCGAAAGTCGGGGATaGCTGCGGATGTGGAGATTC +
Preference number: 4 (lower is better)
Translates to: TPPTLGVGYIQRPTPTLGSESRG*LRMWRF
Trigger: GAATCTCCACATCCGCAGGCATCCCCGACTTTCGCT...CCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp GTCATAGAGGCCGGTGGATGGAGAGCGAAAGTCGGGGATGCCTGCGGATGTGGAGTGATGTGTAGAAGGTaGCGTGCGCCTCCACCAAGT +
Preference number: 4 (lower is better)
Translates to: VIEAGGWRAKVGDACGCGVMCRR*RAPPPS
Trigger: ACTTGGTGGAGGCGCACGGCACCTTCTACACATCAC...TCCACATCCGCAGGCATCCCCGACTTTCGCTCTCCATCCACCGGCCTCTATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
CDS-3UTR GCA 90 bp GTGGGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGCTTAGCGGGTATTCGTaGCGGCAGCTGGCGCTGACG +
Preference number: 4 (lower is better)
Translates to: VGAVRDEGGYSLAQEWLELSGYS*RQLALT
Trigger: CGTCAGCGCCAGCTGCCGGCACGAATACCCGCTAAG...CTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp CTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTACTTAGCGGGTATTCGTaGCGGCAGCTGGCGCTGACG +
Preference number: 4 (lower is better)
Translates to: LRWVWVIFRGPHPHWGRLLSGYS*RQLALT
Trigger: CGTCAGCGCCAGCTGCCGGCACGAATACCCGCTAAG...TAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp ATAAGCAATGTCTTCTGCCCATCCAGCATGGGAAGTGGGTCCCACGTGAAGGGGCTTAGCGGGTATTCGTaGCGGCAGCTGGCGCTGACG +
Preference number: 4 (lower is better)
Translates to: ISNVFCPSSMGSGSHVKGLSGYS*RQLALT
Trigger: CGTCAGCGCCAGCTGCCGGCACGAATACCCGCTAAG...CCCCTTCACGTGGGACCCACTTCCCATGCTGGATGGGCAGAAGACATTGCTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp AGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTATGTTCTGCGTGTCTTAGCGGGTATTCGTaGCGGCAGCTGGCGCTGACG +
Preference number: 4 (lower is better)
Translates to: SPPVPARLFAPGYLCSACLSGYS*RQLALT
Trigger: CGTCAGCGCCAGCTGCCGGCACGAATACCCGCTAAG...ACACGCAGAACATAGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR GCA 90 bp GCAGAGACTCGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTTTCAGGAAGTCTGACTaGATACAGGAGAAGAAACGC +
Preference number: 4 (lower is better)
Translates to: AETREPSRLRLPLRWVWVFRKSD*IQEKKR
Trigger: GCGTTTCTTCTCCTGTATGCAGTCAGACTTCCTGAA...AACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCGAGTCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp AGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGGGGGCAGGAGACAGAGTGGGAGGTGTTAGAGATTTaGTGGGGTTGGGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RLGMVYLATGPRGQETEWEVLEI*WGWGPG
Trigger: CCCTGGCCCCCAACCCCAGCAAATCTCTAACACCTC...CCACTCTGTCTCCTGCCCCCGGGGGCCTGTGGCTAAGTAAACCATACCTAACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp TGGCCTCTGGGTAGGGAAGATGGTACTTCTCTAGGTTGTCATAGAGGCCGGTGGGAGTCGGTCTGGCTCTaGCATGGGCGCGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: WPLGREDGTSLGCHRGRWESVWL*HGRGAE
Trigger: TTCAGCACCGCGCCCATGGCAGAGCCAGACCGACTC...CCACCGGCCTCTATGACAACCTAGAGAAGTACCATCTTCCCTACCCAGAGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423526.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
CDS-3UTR GCA 90 bp CAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTATGTTCTGCGTGAGTCGGTCTGGCTCTaGCATGGGCGCGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: QVLLFQPGYSLQGIYVLRESVWL*HGRGAE
Trigger: TTCAGCACCGCGCCCATGGCAGAGCCAGACCGACTC...ACGCAGAACATAGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420440.5
ENST00000635486.1
CDS-3UTR CCA 90 bp AAGTCGGGGATGCCTGCGGATGTGGAGATTCCAGCTCCCACCAAACAGATGACTAGCAGACGCTCCTTCTaGCTGCCCAGGCTGAGCGTC +
Preference number: 4 (lower is better)
Translates to: KSGMPADVEIPAPTKQMTSRRSF*LPRLSV
Trigger: GACGCTCAGCCTGGGCAGCCAGAAGGAGCGTCTGCT...AGTCATCTGTTTGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCCCCGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000423526.5
ENST00000443898.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
ENST00000635694.1
CDS-3UTR CCA 90 bp CACCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTATGTTCTGAGCAGACGCTCCTTCTaGCTGCCCAGGCTGAGCGTC +
Preference number: 4 (lower is better)
Translates to: HQVLLFQPGYSLQGIYVLSRRSF*LPRLSV
Trigger: GACGCTCAGCCTGGGCAGCCAGAAGGAGCGTCTGCT...CAGAACATAGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR CCA 90 bp GGGCCCGAAGCTCCCTGTCCTGGAAGAGTTAAAAGTTCTGGGGTAGCCCTGGCCATAGAGGCCGGTGGATaGAGAGCGAAAGTCGGGGAT +
Preference number: 4 (lower is better)
Translates to: GPEAPCPGRVKSSGVALAIEAGG*RAKVGD
Trigger: ATCCCCGACTTTCGCTCTCCATCCACCGGCCTCTAT...GGCCAGGGCTACCCCAGAACTTTTAACTCTTCCAGGACAGGGAGCTTCGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp TGCGCCTCCACCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTATAGAGGCCGGTGGATaGAGAGCGAAAGTCGGGGAT +
Preference number: 4 (lower is better)
Translates to: CASTKSSCSSPAIRSRVSIEAGG*RAKVGD
Trigger: ATCCCCGACTTTCGCTCTCCATCCACCGGCCTCTAT...AGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGGTGGAGGCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR CCA 90 bp GGGCCCGAAGCTCCCTGTCCTGGAAGAGTTAAAAGTTCTGGGGTAGCCCTGGCCTGTCATAGAGGCCGGTaGATGGAGAGCGAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: GPEAPCPGRVKSSGVALACHRGR*MESESR
Trigger: CCGACTTTCGCTCTCCATCCACCGGCCTCTATGACA...GGCCAGGGCTACCCCAGAACTTTTAACTCTTCCAGGACAGGGAGCTTCGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GATGGAGAGCGAAAGTCGGGGATGCCTGCGGATGTGGAGATTCCAGCTCCCACCTGTCATAGAGGCCGGTaGATGGAGAGCGAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: DGERKSGMPADVEIPAPTCHRGR*MESESR
Trigger: CCGACTTTCGCTCTCCATCCACCGGCCTCTATGACA...GGTGGGAGCTGGAATCTCCACATCCGCAGGCATCCCCGACTTTCGCTCTCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000423526.5
ENST00000443898.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
ENST00000635694.1
CDS-3UTR CCA 90 bp AGGCCGGTGGATGGAGAGCGAAAGTCGGGGATGCCTGCGGATGTGGAGATTCCATGTCATAGAGGCCGGTaGATGGAGAGCGAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: RPVDGERKSGMPADVEIPCHRGR*MESESR
Trigger: CCGACTTTCGCTCTCCATCCACCGGCCTCTATGACA...TGGAATCTCCACATCCGCAGGCATCCCCGACTTTCGCTCTCCATCCACCGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000423526.5
ENST00000443898.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
ENST00000635694.1
CDS-3UTR CCA 90 bp ACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGGTGTCATAGAGGCCGGTaGATGGAGAGCGAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: TPPTLGVGYIQRPTPTLGCHRGR*MESESR
Trigger: CCGACTTTCGCTCTCCATCCACCGGCCTCTATGACA...CCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GGATGGAGAGCGAAAGTCGGGGATGCCTGCGGATGTGGAGATTCCAGCTCCCACTGTCATAGAGGCCGGTaGATGGAGAGCGAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: GWRAKVGDACGCGDSSSHCHRGR*MESESR
Trigger: CCGACTTTCGCTCTCCATCCACCGGCCTCTATGACA...GTGGGAGCTGGAATCTCCACATCCGCAGGCATCCCCGACTTTCGCTCTCCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000423526.5
ENST00000443898.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
ENST00000635694.1
CDS-3UTR CCA 90 bp CCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCACAGGATAGAGTTCCTTaGCGAGGGCGAAGAAGGGTT +
Preference number: 4 (lower is better)
Translates to: PSRLRLPLRWVWVIFRGPQDRVP*RGRRRV
Trigger: AACCCTTCTTCGCCCTCGCCAAGGAACTCTATCCTG...TGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGACTGGGCATCTATGCTaGCGTGCTCCCTCCGGACAA +
Preference number: 4 (lower is better)
Translates to: QTPPTLGVGYIQRPTPTLTGHLC*RAPSGQ
Trigger: TTGTCCGGAGGGAGCACGCCAGCATAGATGCCCAGT...CAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GAGATTGGGGGATGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGTCCTGGCCTCGTCCTTaGCAGGTGGCGGGGACTTCT +
Preference number: 4 (lower is better)
Translates to: EIGGCSELPRQELLVKRGSWPRP*QVAGTS
Trigger: AGAAGTCCCCGCCACCTGCCAAGGACGAGGCCAGGA...CCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACATCCCCCAATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GTGGGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGGCTCGGCATCCCGCCTaGGAGATGCAGCTGTCACTG +
Preference number: 4 (lower is better)
Translates to: VGAVRDEGGYSLAQEWLEARHPA*EMQLSL
Trigger: CAGTGACAGCTGCATCTCCCAGGCGGGATGCCGAGC...CTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGCCAGACAAGAACTGCTaGTTAAGAGGGGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: QTPPTLGVGYIQRPTPTLPDKNC*LRGGQA
Trigger: GGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGG...CAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CACCCACACTGGGGTAGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGGGGGTCCTTAGCCCAGGAGTaGTTAGAGACAGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: HPHWGRLGMVYLATGPRGSLAQE*LETVGL
Trigger: CAGCCCCACTGTCTCTAACCACTCCTGGGCTAAGGA...CCCCCGGGGGCCTGTGGCTAAGTAAACCATACCTAACCTACCCCAGTGTGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GAGATTGGGGGATGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGGTAGCCCTGGCCCCGTaGGGGCAGTTAGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: EIGGCSELPRQELLVKRGVALAP*GQLEMR
Trigger: CCTCATCTCTAACTGCCCCCACGGGGCCAGGGCTAC...CCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACATCCCCCAATCTC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CACCCACACTGGGGTAGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGGGGGGGCCCACACCCACACTaGGGTAGGTTAGGTATGGTT +
Preference number: 4 (lower is better)
Translates to: HPHWGRLGMVYLATGPRGGPHPH*GRLGMV
Trigger: AACCATACCTAACCTACCCCAGTGTGGGTGTGGGCC...CCCCCGGGGGCCTGTGGCTAAGTAAACCATACCTAACCTACCCCAGTGTGGGTG
59% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GGGCCCGAAGCTCCCTGTCCTGGAAGAGTTAAAAGTTCTGGGGTAGCCCTGGCCGGCGCCCGGAAAATGTaGGAACGGCTAGAGAGTTGT +
Preference number: 4 (lower is better)
Translates to: GPEAPCPGRVKSSGVALAGARKM*ERLESC
Trigger: ACAACTCTCTAGCCGTTCCCACATTTTCCGGGCGCC...GGCCAGGGCTACCCCAGAACTTTTAACTCTTCCAGGACAGGGAGCTTCGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358931.9
ENST00000392081.6
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GTCGGGGATGCCTGCGGATGTGGAGATTCCAGCTCCCACCAAACAGATGACTCTGAATCTGAGTCGGTCTaGCTCTGCCATGGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: VGDACGCGDSSSHQTDDSESESV*LCHGRG
Trigger: ACCGCGCCCATGGCAGAGCCAGACCGACTCAGATTC...AGAGTCATCTGTTTGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCCCCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000423526.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
CDS-3UTR CCA 90 bp TCTTTGGGGCCTGCCCAGGCTAAAAGATGGCTGCAGACAGCTGCTCGCCTGCCGTGCCTGTGTTGTCTTTaGGGCCTGCCCAGGCTAAAA +
Preference number: 4 (lower is better)
Translates to: SLGPAQAKRWLQTAARLPCLCCL*GLPRLK
Trigger: TTTTAGCCTGGGCAGGCCCCAAAGACAACACAGGCA...CGGCAGGCGAGCAGCTGTCTGCAGCCATCTTTTAGCCTGGGCAGGCCCCAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423526.5
ENST00000634761.1
CDS-3UTR TCA 90 bp AGGGAAGATGGTACTTCTCTAGGTTGTCATAGAGGCCGGTGGATGGAGAGCGAATGGGTCTCCAGAGGGTaGGAGGGGTCTGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: REDGTSLGCHRGRWMESEWVSRG*EGSGSA
Trigger: GGCAGAGCCAGACCCCTCTCACCCTCTGGAGACCCA...TTCGCTCTCCATCCACCGGCCTCTATGACAACCTAGAGAAGTACCATCTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
CDS-3UTR TCA 90 bp TGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTTCTGAATCTGAGTCCTaGGCCTCCTGCACCTTCCCT +
Preference number: 4 (lower is better)
Translates to: CSELPRQELLVKRGPGPVSESES*ASCTFP
Trigger: AGGGAAGGTGCAGGAGGCTCAGGACTCAGATTCAGA...AACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249396.12
ENST00000634533.2
CDS-3UTR TCA 90 bp CTTGAACTGCCCAGGATAGAGTTCCTTGGCGAGGGCGAAGAAGGGTTCCGGATGCTCCCACCAAACAGATaGCTCTGCGACAGCGTTCGC +
Preference number: 4 (lower is better)
Translates to: LELPRIEFLGEGEEGFRMLPPNR*LCDSVR
Trigger: GCGAACGCTGTCGCAGAGTCATCTGTTTGGTGGGAG...CATCCGGAACCCTTCTTCGCCCTCGCCAAGGAACTCTATCCTGGGCAGTTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
CDS-3UTR TCA 90 bp AAGTGGGTCCCACGTGAAGGGGGCCCACCACCCACTTTGGGAGCTGAAGGCAGAGACAGATGGTTGGCTTaGACTGCCCAGGATAGAGTT +
Preference number: 4 (lower is better)
Translates to: KWVPREGGPPPTLGAEGRDRWLA*TAQDRV
Trigger: AACTCTATCCTGGGCAGTTCAAGCCAACCATCTGTC...TCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCCCCCTTCACGTGGGACCCACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp CGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGACAGATGGTTGGCTTaGACTGCCCAGGATAGAGTT +
Preference number: 4 (lower is better)
Translates to: REPSRLRLPLRWVWVIFRDRWLA*TAQDRV
Trigger: AACTCTATCCTGGGCAGTTCAAGCCAACCATCTGTC...TCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp AAGTCGGGGATGCCTGCGGATGTGGAGATTCCAGCTCCCACCAAACAGATGACTGGCGCTGACGCAGTGTaGTGTGTAGAAGGTGCCGTG +
Preference number: 4 (lower is better)
Translates to: KSGMPADVEIPAPTKQMTGADAV*CVEGAV
Trigger: CACGGCACCTTCTACACATCACACTGCGTCAGCGCC...AGTCATCTGTTTGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCCCCGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
CDS-3UTR TCA 90 bp ATCTTCTCTTTCATCCAGCTTAGCGGGTATTCGTGCCGGCAGCTGGCGCTGACGGGCTTCACCAGGCTCTaGCAGTCTTCACACTTGGGC +
Preference number: 4 (lower is better)
Translates to: IFSFIQLSGYSCRQLALTGFTRL*QSSHLG
Trigger: GCCCAAGTGTGAAGACTGTCAGAGCCTGGTGAAGCC...CGTCAGCGCCAGCTGCCGGCACGAATACCCGCTAAGCTGGATGAAAGAGAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR TCA 90 bp CCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTATGTTCTGCGGGCTTCACCAGGCTCTaGCAGTCTTCACACTTGGGC +
Preference number: 4 (lower is better)
Translates to: PSPPVPARLFAPGYLCSAGFTRL*QSSHLG
Trigger: GCCCAAGTGTGAAGACTGTCAGAGCCTGGTGAAGCC...CGCAGAACATAGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR TCA 90 bp GAGATTGGGGGATGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGGCAAGGAGGTACCCATaGCCAGGAGGAGGTCCACCT +
Preference number: 4 (lower is better)
Translates to: EIGGCSELPRQELLVKRGARRYP*PGGGPP
Trigger: AGGTGGACCTCCTCCTGGTCATGGGTACCTCCTTGC...CCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACATCCCCCAATCTC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp CACCCACACTGGGGTAGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGGGGGGATTGGGGGATGTTCTaGGCTCCCCAGACAAGAACT +
Preference number: 4 (lower is better)
Translates to: HPHWGRLGMVYLATGPRGDWGMF*APQTRT
Trigger: AGTTCTTGTCTGGGGAGCTCAGAACATCCCCCAATC...CCCCCGGGGGCCTGTGGCTAAGTAAACCATACCTAACCTACCCCAGTGTGGGTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 24 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp TGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTAGGTATGGTTTACGAAGTGGGTCCCACGTaGAGGGGGCCCACCACCCAC +
Preference number: 4 (lower is better)
Translates to: WVIFRGPHPHWGRLGMVYEVGPT*RGPTTH
Trigger: GTGGGTGGTGGGCCCCCTTCACGTGGGACCCACTTC...GTAAACCATACCTAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp CTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTAGACTGCTCTGTCCCGTaGCGGCACCAGAAATGGGAG +
Preference number: 4 (lower is better)
Translates to: LRWVWVIFRGPHPHWGRLDCSVP*RHQKWE
Trigger: CTCCCATTTCTGGTGCCGTCACGGGACAGAGCAGTC...TAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358931.9
ENST00000392081.6
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp AGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTATGTTCTGCGTGTGACTGCTCTGTCCCGTaGCGGCACCAGAAATGGGAG +
Preference number: 4 (lower is better)
Translates to: SPPVPARLFAPGYLCSACDCSVP*RHQKWE
Trigger: CTCCCATTTCTGGTGCCGTCACGGGACAGAGCAGTC...ACACGCAGAACATAGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR GCA 90 bp CTTAGCCCAGGAGTGGTTAGAGACAGTGGGGCTGGTAGAGATGCCTGTTTAAGCAGAGGGGTCTGGCTCTaGCATGGGCGCGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: LSPGVVRDSGAGRDACLSRGVWL*HGRGAE
Trigger: TTCAGCACCGCGCCCATGGCAGAGCCAGACCCCTCT...GCTTAAACAGGCATCTCTACCAGCCCCACTGTCTCTAACCACTCCTGGGCTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249396.12
ENST00000634533.2
CDS-3UTR GCA 90 bp GTCGGGGATGCCTGCGGATGTGGAGATTCCAGCTCCCACCAAACAGATGACTCTCAGGAAGTCCATGTCTaGTTCTCCACCAGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: VGDACGCGDSSSHQTDDSQEVHV*FSTSGS
Trigger: GGAGCCGCTGGTGGAGAAGCAGACATGGACTTCCTG...AGAGTCATCTGTTTGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCCCCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000423526.5
ENST00000443898.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
ENST00000635694.1
CDS-3UTR GCA 90 bp TGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGTGATGTGTAGAAGGTaGCGTGCGCCTCCACCAAGT +
Preference number: 4 (lower is better)
Translates to: CSELPRQELLVKRGPGPVVMCRR*RAPPPS
Trigger: ACTTGGTGGAGGCGCACGGCACCTTCTACACATCAC...AACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp CTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTAGCATCTATGCTGGCGTaGTCCCTCCGGACAAGGTCC +
Preference number: 4 (lower is better)
Translates to: LRWVWVIFRGPHPHWGRLASMLA*SLRTRS
Trigger: GGACCTTGTCCGGAGGGAGCACGCCAGCATAGATGC...TAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp GGCCCACACCCACACTGGGGTAGGTTAGGTATGGTTTACTTAGCCACAGGCCCCTCCCCAGACAAGAACTaGTGGTTAAGAGGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GPHPHWGRLGMVYLATGPSPDKN*WLRGGQ
Trigger: CTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGA...GGGGCCTGTGGCTAAGTAAACCATACCTAACCTACCCCAGTGTGGGTGTGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp CTTAGCCCAGGAGTGGTTAGAGACAGTGGGGCTGGTAGAGATGCCTGTTTAAGCGAGTCGGTCTGGCTCTaGCATGGGCGCGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: LSPGVVRDSGAGRDACLSESVWL*HGRGAE
Trigger: TTCAGCACCGCGCCCATGGCAGAGCCAGACCGACTC...GCTTAAACAGGCATCTCTACCAGCCCCACTGTCTCTAACCACTCCTGGGCTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358931.9
ENST00000392081.6
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp AGACGATATCAGGCTTCACCAGGCTCTGACAGTCTTCACACTTGGGCGTCACCTGAGTCGGTCTGGCTCTaGCATGGGCGCGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: RRYQASPGSDSLHTWASPESVWL*HGRGAE
Trigger: TTCAGCACCGCGCCCATGGCAGAGCCAGACCGACTC...AGGTGACGCCCAAGTGTGAAGACTGTCAGAGCCTGGTGAAGCCTGATATCGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420440.5
ENST00000635486.1
CDS-3UTR GCA 90 bp CCTCTGGGTAGGGAAGATGGTACTTCTCTAGGTTGTCATAGAGGCCGGTGGATGGAGTCGGTCTGGCTCTaGCATGGGCGCGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: PLGREDGTSLGCHRGRWMESVWL*HGRGAE
Trigger: TTCAGCACCGCGCCCATGGCAGAGCCAGACCGACTC...CATCCACCGGCCTCTATGACAACCTAGAGAAGTACCATCTTCCCTACCCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423526.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
CDS-3UTR GCA 90 bp CTTAGCCCAGGAGTGGTTAGAGACAGTGGGGCTGGTAGAGATGCCTGTTTAAGCGCCAGGCCACGTCCCTaGAAGGAGGTACCCATGACC +
Preference number: 4 (lower is better)
Translates to: LSPGVVRDSGAGRDACLSARPRP*KEVPMT
Trigger: GGTCATGGGTACCTCCTTGCAGGGACGTGGCCTGGC...GCTTAAACAGGCATCTCTACCAGCCCCACTGTCTCTAACCACTCCTGGGCTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
CDS-3UTR GCA 90 bp CTGGGTAGGGAAGATGGTACTTCTCTAGGTTGTCATAGAGGCCGGTGGATGGAGGCAGAGCGTTCGCTCTaGATGTACCGGGCCACCCCT +
Preference number: 4 (lower is better)
Translates to: LGREDGTSLGCHRGRWMEAERSL*MYRATP
Trigger: AGGGGTGGCCCGGTACATGCAGAGCGAACGCTCTGC...CTCCATCCACCGGCCTCTATGACAACCTAGAGAAGTACCATCTTCCCTACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423526.5
ENST00000634761.1
CDS-3UTR GCA 90 bp AGGGAAGATGGTACTTCTCTAGGTTGTCATAGAGGCCGGTGGATGGAGAGCGAAAGACAGCTGCTCGCCTaGCGCAGGAGAGGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: REDGTSLGCHRGRWMESERQLLA*RRRGRL
Trigger: GAGCCTCCCTCTCCTGCGGCAGGCGAGCAGCTGTCT...TTCGCTCTCCATCCACCGGCCTCTATGACAACCTAGAGAAGTACCATCTTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423526.5
ENST00000634761.1
CDS-3UTR CCA 90 bp GGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGACAAGCAGACGCTCCTTCTaGCTGCCCAGGCTGAGCGTC +
Preference number: 4 (lower is better)
Translates to: GAVRDEGGYSLAQEWLETSRRSF*LPRLSV
Trigger: GACGCTCAGCCTGGGCAGCCAGAAGGAGCGTCTGCT...TGTCTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CTTAGCCCAGGAGTGGTTAGAGACAGTGGGGCTGGTAGAGATGCCTGTTTAAGCAGCAGACGCTCCTTCTaGCTGCCCAGGCTGAGCGTC +
Preference number: 4 (lower is better)
Translates to: LSPGVVRDSGAGRDACLSSRRSF*LPRLSV
Trigger: GACGCTCAGCCTGGGCAGCCAGAAGGAGCGTCTGCT...GCTTAAACAGGCATCTCTACCAGCCCCACTGTCTCTAACCACTCCTGGGCTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTATGTTCTGCGGGATGCCTGCGGATGTaGAGATTCCAGCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: PSPPVPARLFAPGYLCSAGCLRM*RFQLPP
Trigger: TGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCC...CGCAGAACATAGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR CCA 90 bp TGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTATAGAGGCCGGTGGATaGAGAGCGAAAGTCGGGGAT +
Preference number: 4 (lower is better)
Translates to: CSELPRQELLVKRGPGPVIEAGG*RAKVGD
Trigger: ATCCCCGACTTTCGCTCTCCATCCACCGGCCTCTAT...AACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp TCTTTCATCCAGCTTAGCGGGTATTCGTGCCGGCAGCTGGCGCTGACGCAGTGTTGTCATAGAGGCCGGTaGATGGAGAGCGAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: SFIQLSGYSCRQLALTQCCHRGR*MESESR
Trigger: CCGACTTTCGCTCTCCATCCACCGGCCTCTATGACA...ACACTGCGTCAGCGCCAGCTGCCGGCACGAATACCCGCTAAGCTGGATGAAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR CCA 90 bp ATAGAGGCCGGTGGATGGAGAGCGAAAGTCGGGGATGCCTGCGGATGTGGAGATTGTCATAGAGGCCGGTaGATGGAGAGCGAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: IEAGGWRAKVGDACGCGDCHRGR*MESESR
Trigger: CCGACTTTCGCTCTCCATCCACCGGCCTCTATGACA...ATCTCCACATCCGCAGGCATCCCCGACTTTCGCTCTCCATCCACCGGCCTCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000423526.5
ENST00000443898.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
ENST00000635694.1
CDS-3UTR CCA 90 bp CTGTCCCTGAGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTGTCACTGGGGTTCTCAAAGATGGCCTCTaGGTAGGGAAGATGGTACTT +
Preference number: 4 (lower is better)
Translates to: LSLRSSASRLGDAAVTGVLKDGL*VGKMVL
Trigger: AAGTACCATCTTCCCTACCCAGAGGCCATCTTTGAG...AACCCCAGTGACAGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
CDS-3UTR CCA 90 bp AAGGTGCCGTGCGCCTCCACCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCCTCAAAGATGGCCTCTaGGTAGGGAAGATGGTACTT +
Preference number: 4 (lower is better)
Translates to: KVPCASTKSSCSSPAIRSLKDGL*VGKMVL
Trigger: AAGTACCATCTTCCCTACCCAGAGGCCATCTTTGAG...GGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGGTGGAGGCGCACGGCACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR CCA 90 bp CTTAGCCCAGGAGTGGTTAGAGACAGTGGGGCTGGTAGAGATGCCTGTTTAAGCTCCTGGCCTCGTCCTTaGCAGGTGGCGGGGACTTCT +
Preference number: 4 (lower is better)
Translates to: LSPGVVRDSGAGRDACLSSWPRP*QVAGTS
Trigger: AGAAGTCCCCGCCACCTGCCAAGGACGAGGCCAGGA...GCTTAAACAGGCATCTCTACCAGCCCCACTGTCTCTAACCACTCCTGGGCTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTACCCTCTCTGTTGTCCTaGCCTCGTCCTTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LRWVWVIFRGPHPHWGRLPSLLS*PRPWQV
Trigger: CACCTGCCAAGGACGAGGCCAGGACAACAGAGAGGG...TAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAAGATGCAGCTGTCACTaGGGTTTCTCCCTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: REPSRLRLPLRWVWVIFRRCSCH*GFSLSV
Trigger: AACAGAGAGGGAGAAACCCCAGTGACAGCTGCATCT...TCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGACAGCTCGGCATCCCGCCTaGGAGATGCAGCTGTCACTG +
Preference number: 4 (lower is better)
Translates to: GAVRDEGGYSLAQEWLETARHPA*EMQLSL
Trigger: CAGTGACAGCTGCATCTCCCAGGCGGGATGCCGAGC...TGTCTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp TGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGTGTTAGAGATTTGCTaGGGTTGGGGGCCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: CSELPRQELLVKRGPGPVVLEIC*GWGPGL
Trigger: CAACCCTGGCCCCCAACCCCAGCAAATCTCTAACAC...AACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GGCCCACACCCACACTGGGGTAGGTTAGGTATGGTTTACTTAGCCACAGGCCCCGTGTTAGAGATTTGCTaGGGTTGGGGGCCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: GPHPHWGRLGMVYLATGPVLEIC*GWGPGL
Trigger: CAACCCTGGCCCCCAACCCCAGCAAATCTCTAACAC...GGGGCCTGTGGCTAAGTAAACCATACCTAACCTACCCCAGTGTGGGTGTGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GTCCCTGAGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTGTCACTGGGGTTTCTGCCTGTTTAAGCCTTaGCCTCTAGGAGGTGTTAGA +
Preference number: 4 (lower is better)
Translates to: VPEELGIPPGRCSCHWGFCLFKP*PLGGVR
Trigger: TCTAACACCTCCTAGAGGCCAAGGCTTAAACAGGCA...GAAACCCCAGTGACAGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
CDS-3UTR CCA 90 bp GGCCCACACCCACACTGGGGTAGGTTAGGTATGGTTTACTTAGCCACAGGCCCCGGCCCACACCCACACTaGGGTAGGTTAGGTATGGTT +
Preference number: 4 (lower is better)
Translates to: GPHPHWGRLGMVYLATGPGPHPH*GRLGMV
Trigger: AACCATACCTAACCTACCCCAGTGTGGGTGTGGGCC...GGGGCCTGTGGCTAAGTAAACCATACCTAACCTACCCCAGTGTGGGTGTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp TGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTCCCCTACGCTGGGTGTaGGTTATATTCAGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: CSELPRQELLVKRGPGPVPLRWV*VIFRGP
Trigger: TGGGCCTCTGAATATAACCCACACCCAGCGTAGGGG...AACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GGCCCACACCCACACTGGGGTAGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCCCCTACGCTGGGTGTaGGTTATATTCAGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: GPHPHWGRLGMVYLATGPPLRWV*VIFRGP
Trigger: TGGGCCTCTGAATATAACCCACACCCAGCGTAGGGG...GGGGCCTGTGGCTAAGTAAACCATACCTAACCTACCCCAGTGTGGGTGTGGGCC
58% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCAAGACTCCCCCTACGCTaGGTGTGGGTTATATTCAGA +
Preference number: 4 (lower is better)
Translates to: PSRLRLPLRWVWVIFRGPRLPLR*VWVIFR
Trigger: TCTGAATATAACCCACACCCAGCGTAGGGGGAGTCT...TGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp TCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGAGACTCCCCCTACGCTaGGTGTGGGTTATATTCAGA +
Preference number: 4 (lower is better)
Translates to: SELPRQELLVKRGPGPVGRLPLR*VWVIFR
Trigger: TCTGAATATAACCCACACCCAGCGTAGGGGGAGTCT...CCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GTGGGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGATCCAGCATGGGAAGTaGGTCCCACGTGAAGGGGGC +
Preference number: 4 (lower is better)
Translates to: VGAVRDEGGYSLAQEWLEIQHGK*VPREGG
Trigger: GCCCCCTTCACGTGGGACCCACTTCCCATGCTGGAT...CTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GGCCCACACCCACACTGGGGTAGGTTAGGTATGGTTTACTTAGCCACAGGCCCCGGCGCCCGGAAAATGTaGGAACGGCTAGAGAGTTGT +
Preference number: 4 (lower is better)
Translates to: GPHPHWGRLGMVYLATGPGARKM*ERLESC
Trigger: ACAACTCTCTAGCCGTTCCCACATTTTCCGGGCGCC...GGGGCCTGTGGCTAAGTAAACCATACCTAACCTACCCCAGTGTGGGTGTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358931.9
ENST00000392081.6
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGCGCCCGGAAAATGTaGGAACGGCTAGAGAGTTGT +
Preference number: 4 (lower is better)
Translates to: QTPPTLGVGYIQRPTPTLGARKM*ERLESC
Trigger: ACAACTCTCTAGCCGTTCCCACATTTTCCGGGCGCC...CAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358931.9
ENST00000392081.6
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTAGAGTCCCAGAAGGCGTaGCGTCAGCAGCCATGTTGG +
Preference number: 4 (lower is better)
Translates to: LRWVWVIFRGPHPHWGRLESQKA*RQQPCW
Trigger: CCAACATGGCTGCTGACGCCACGCCTTCTGGGACTC...TAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358931.9
ENST00000392081.6
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp ATAAGCAATGTCTTCTGCCCATCCAGCATGGGAAGTGGGTCCCACGTGAAGGGGGAATCTGAGTCGGTCTaGCTCTGCCATGGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: ISNVFCPSSMGSGSHVKGESESV*LCHGRG
Trigger: ACCGCGCCCATGGCAGAGCCAGACCGACTCAGATTC...CCCCTTCACGTGGGACCCACTTCCCATGCTGGATGGGCAGAAGACATTGCTTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358931.9
ENST00000392081.6
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CACCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTATGTTCTGGAATCTGAGTCGGTCTaGCTCTGCCATGGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: HQVLLFQPGYSLQGIYVLESESV*LCHGRG
Trigger: ACCGCGCCCATGGCAGAGCCAGACCGACTCAGATTC...CAGAACATAGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420440.5
ENST00000635486.1
CDS-3UTR CCA 90 bp GAGATTGGGGGATGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGGAATCTGAGTCGGTCTaGCTCTGCCATGGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: EIGGCSELPRQELLVKRGESESV*LCHGRG
Trigger: ACCGCGCCCATGGCAGAGCCAGACCGACTCAGATTC...CCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACATCCCCCAATCTC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000358931.9
ENST00000392081.6
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp TCCACCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTATGTTCGAATCTGAGTCGGTCTaGCTCTGCCATGGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: STKSSCSSPAIRSRVSMFESESV*LCHGRG
Trigger: ACCGCGCCCATGGCAGAGCCAGACCGACTCAGATTC...GAACATAGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420440.5
ENST00000635486.1
CDS-3UTR TCA 90 bp CTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTACTCCCACCAAACAGATaGCTCTGCGACAGCGTTCGC +
Preference number: 4 (lower is better)
Translates to: LRWVWVIFRGPHPHWGRLLPPNR*LCDSVR
Trigger: GCGAACGCTGTCGCAGAGTCATCTGTTTGGTGGGAG...TAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp AGAAGATCTTCTCTTTCATCCAGCTTAGCGGGTATTCGTGCCGGCAGCTGGCGCCTCCCACCAAACAGATaGCTCTGCGACAGCGTTCGC +
Preference number: 4 (lower is better)
Translates to: RRSSLSSSLAGIRAGSWRLPPNR*LCDSVR
Trigger: GCGAACGCTGTCGCAGAGTCATCTGTTTGGTGGGAG...GCGCCAGCTGCCGGCACGAATACCCGCTAAGCTGGATGAAAGAGAAGATCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR TCA 90 bp ATAAGCAATGTCTTCTGCCCATCCAGCATGGGAAGTGGGTCCCACGTGAAGGGGCTCCCACCAAACAGATaGCTCTGCGACAGCGTTCGC +
Preference number: 4 (lower is better)
Translates to: ISNVFCPSSMGSGSHVKGLPPNR*LCDSVR
Trigger: GCGAACGCTGTCGCAGAGTCATCTGTTTGGTGGGAG...CCCCTTCACGTGGGACCCACTTCCCATGCTGGATGGGCAGAAGACATTGCTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp GGGCCCGAAGCTCCCTGTCCTGGAAGAGTTAAAAGTTCTGGGGTAGCCCTGGCCGACAGATGGTTGGCTTaGACTGCCCAGGATAGAGTT +
Preference number: 4 (lower is better)
Translates to: GPEAPCPGRVKSSGVALADRWLA*TAQDRV
Trigger: AACTCTATCCTGGGCAGTTCAAGCCAACCATCTGTC...GGCCAGGGCTACCCCAGAACTTTTAACTCTTCCAGGACAGGGAGCTTCGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp GGCCCACACCCACACTGGGGTAGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCCTTCAGCAGGCGCATaGAGTAGTGACAGATGGTTG +
Preference number: 4 (lower is better)
Translates to: GPHPHWGRLGMVYLATGPPSAGA*SSDRWL
Trigger: CAACCATCTGTCACTACTTCATGCGCCTGCTGAAGG...GGGGCCTGTGGCTAAGTAAACCATACCTAACCTACCCCAGTGTGGGTGTGGGCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp AGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGGGGGCAGGAGACAGAGTGGCCTTCAGCAGGCGCATaGAGTAGTGACAGATGGTTG +
Preference number: 4 (lower is better)
Translates to: RLGMVYLATGPRGQETEWPSAGA*SSDRWL
Trigger: CAACCATCTGTCACTACTTCATGCGCCTGCTGAAGG...CCACTCTGTCTCCTGCCCCCGGGGGCCTGTGGCTAAGTAAACCATACCTAACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp GGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGACAGGCGCTGACGCAGTGTaGTGTGTAGAAGGTGCCGTG +
Preference number: 4 (lower is better)
Translates to: GAVRDEGGYSLAQEWLETGADAV*CVEGAV
Trigger: CACGGCACCTTCTACACATCACACTGCGTCAGCGCC...TGTCTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp TCAGAGAAGATCTTCTCTTTCATCCAGCTTAGCGGGTATTCGTGCCGGCAGCTGGCCGGCAGCTGGCGCTaGCGCAGTGTGATGTGTAGA +
Preference number: 4 (lower is better)
Translates to: SEKIFSFIQLSGYSCRQLAGSWR*RSVMCR
Trigger: TCTACACATCACACTGCGTCAGCGCCAGCTGCCGGC...CAGCTGCCGGCACGAATACCCGCTAAGCTGGATGAAAGAGAAGATCTTCTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR TCA 90 bp CTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTAGGCTTCACCAGGCTCTaGCAGTCTTCACACTTGGGC +
Preference number: 4 (lower is better)
Translates to: LRWVWVIFRGPHPHWGRLGFTRL*QSSHLG
Trigger: GCCCAAGTGTGAAGACTGTCAGAGCCTGGTGAAGCC...TAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp TCCACCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTATGTTCGGCTTCACCAGGCTCTaGCAGTCTTCACACTTGGGC +
Preference number: 4 (lower is better)
Translates to: STKSSCSSPAIRSRVSMFGFTRL*QSSHLG
Trigger: GCCCAAGTGTGAAGACTGTCAGAGCCTGGTGAAGCC...GAACATAGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR TCA 90 bp GGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGACAGCAAGGAGGTACCCATaGCCAGGAGGAGGTCCACCT +
Preference number: 4 (lower is better)
Translates to: GAVRDEGGYSLAQEWLETARRYP*PGGGPP
Trigger: AGGTGGACCTCCTCCTGGTCATGGGTACCTCCTTGC...TGTCTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp CAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGATTGGGGGATGTTCTaGGCTCCCCAGACAAGAACT +
Preference number: 4 (lower is better)
Translates to: QTPPTLGVGYIQRPTPTLDWGMF*APQTRT
Trigger: AGTTCTTGTCTGGGGAGCTCAGAACATCCCCCAATC...CAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp CTTAGCCCAGGAGTGGTTAGAGACAGTGGGGCTGGTAGAGATGCCTGTTTAAGCGACTGCTCTGTCCCGTaGCGGCACCAGAAATGGGAG +
Preference number: 4 (lower is better)
Translates to: LSPGVVRDSGAGRDACLSDCSVP*RHQKWE
Trigger: CTCCCATTTCTGGTGCCGTCACGGGACAGAGCAGTC...GCTTAAACAGGCATCTCTACCAGCCCCACTGTCTCTAACCACTCCTGGGCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358931.9
ENST00000392081.6
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp CAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTATGTTCTGCGTCAGGAAGTCCATGTCTaGTTCTCCACCAGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: QVLLFQPGYSLQGIYVLRQEVHV*FSTSGS
Trigger: GGAGCCGCTGGTGGAGAAGCAGACATGGACTTCCTG...ACGCAGAACATAGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR GCA 90 bp TCCACCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTATGTTCCAGGAAGTCCATGTCTaGTTCTCCACCAGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: STKSSCSSPAIRSRVSMFQEVHV*FSTSGS
Trigger: GGAGCCGCTGGTGGAGAAGCAGACATGGACTTCCTG...GAACATAGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR GCA 90 bp TCTCTAGGTTGTCATAGAGGCCGGTGGATGGAGAGCGAAAGTCGGGGATGCCTGAAAGTCGGGGATGCCTaGGGATGTGGAGATTCCAGC +
Preference number: 4 (lower is better)
Translates to: SLGCHRGRWMESESRGCLKVGDA*GCGDSS
Trigger: GCTGGAATCTCCACATCCGCAGGCATCCCCGACTTT...CAGGCATCCCCGACTTTCGCTCTCCATCCACCGGCCTCTATGACAACCTAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000423526.5
ENST00000443898.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
ENST00000635694.1
CDS-3UTR GCA 90 bp GCGAAAGTCGGGGATGCCTGCGGATGTGGAGATTCCAGCTCCCACCAAACAGATAAAGTCGGGGATGCCTaGGGATGTGGAGATTCCAGC +
Preference number: 4 (lower is better)
Translates to: AKVGDACGCGDSSSHQTDKVGDA*GCGDSS
Trigger: GCTGGAATCTCCACATCCGCAGGCATCCCCGACTTT...ATCTGTTTGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCCCCGACTTTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000423526.5
ENST00000443898.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
ENST00000635694.1
CDS-3UTR GCA 90 bp CGAAAGTCGGGGATGCCTGCGGATGTGGAGATTCCAGCTCCCACCAAACAGATGAAAGTCGGGGATGCCTaGGGATGTGGAGATTCCAGC +
Preference number: 4 (lower is better)
Translates to: RKSGMPADVEIPAPTKQMKVGDA*GCGDSS
Trigger: GCTGGAATCTCCACATCCGCAGGCATCCCCGACTTT...CATCTGTTTGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCCCCGACTTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000423526.5
ENST00000443898.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
ENST00000635694.1
CDS-3UTR GCA 90 bp CCTGCGGATGTGGAGATTCCAGCTCCCACCAAACAGATGACTCTGCGACAGCGTAGCGAAAGTCGGGGATaGCTGCGGATGTGGAGATTC +
Preference number: 4 (lower is better)
Translates to: PADVEIPAPTKQMTLRQRSESRG*LRMWRF
Trigger: GAATCTCCACATCCGCAGGCATCCCCGACTTTCGCT...ACGCTGTCGCAGAGTCATCTGTTTGGTGGGAGCTGGAATCTCCACATCCGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
CDS-3UTR GCA 90 bp ATCTTCTCTTTCATCCAGCTTAGCGGGTATTCGTGCCGGCAGCTGGCGCTGACGAGCGAAAGTCGGGGATaGCTGCGGATGTGGAGATTC +
Preference number: 4 (lower is better)
Translates to: IFSFIQLSGYSCRQLALTSESRG*LRMWRF
Trigger: GAATCTCCACATCCGCAGGCATCCCCGACTTTCGCT...CGTCAGCGCCAGCTGCCGGCACGAATACCCGCTAAGCTGGATGAAAGAGAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR GCA 90 bp TCTCTAGGTTGTCATAGAGGCCGGTGGATGGAGAGCGAAAGTCGGGGATGCCTGAGCGAAAGTCGGGGATaGCTGCGGATGTGGAGATTC +
Preference number: 4 (lower is better)
Translates to: SLGCHRGRWMESESRGCLSESRG*LRMWRF
Trigger: GAATCTCCACATCCGCAGGCATCCCCGACTTTCGCT...CAGGCATCCCCGACTTTCGCTCTCCATCCACCGGCCTCTATGACAACCTAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000423526.5
ENST00000443898.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
ENST00000635694.1
CDS-3UTR GCA 90 bp TTCCAGCCCGGCTATTCGCTCCAGGGTATCTATGTTCTGCGTGTAGCAGCGCAGGTGATGTGTAGAAGGTaGCGTGCGCCTCCACCAAGT +
Preference number: 4 (lower is better)
Translates to: FQPGYSLQGIYVLRVAAQVMCRR*RAPPPS
Trigger: ACTTGGTGGAGGCGCACGGCACCTTCTACACATCAC...CTGCGCTGCTACACGCAGAACATAGATACCCTGGAGCGAATAGCCGGGCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR GCA 90 bp CCTGCGGATGTGGAGATTCCAGCTCCCACCAAACAGATGACTCTGCGACAGCGTGTGATGTGTAGAAGGTaGCGTGCGCCTCCACCAAGT +
Preference number: 4 (lower is better)
Translates to: PADVEIPAPTKQMTLRQRVMCRR*RAPPPS
Trigger: ACTTGGTGGAGGCGCACGGCACCTTCTACACATCAC...ACGCTGTCGCAGAGTCATCTGTTTGGTGGGAGCTGGAATCTCCACATCCGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
CDS-3UTR GCA 90 bp CCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGGCTCAGCTGTTCAGGAAGTCTGACTaGATACAGGAGAAGAAACGC +
Preference number: 4 (lower is better)
Translates to: PRQELLVKRGPGPVGAQLFRKSD*IQEKKR
Trigger: GCGTTTCTTCTCCTGTATGCAGTCAGACTTCCTGAA...CAGCTGAGCCCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp CTTAGCCCAGGAGTGGTTAGAGACAGTGGGGCTGGTAGAGATGCCTGTTTAAGCAGGGAGGCAAAGGGCTaGACCTGCAAGGAGGTACCC +
Preference number: 4 (lower is better)
Translates to: LSPGVVRDSGAGRDACLSREAKG*TCKEVP
Trigger: GGGTACCTCCTTGCAGGTGCAGCCCTTTGCCTCCCT...GCTTAAACAGGCATCTCTACCAGCCCCACTGTCTCTAACCACTCCTGGGCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249396.12
ENST00000392081.6
ENST00000634533.2
ENST00000635478.1
CDS-3UTR GCA 90 bp GTGGGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGATCCCGCCTGGGAGATaGAGCTGTCACTGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: VGAVRDEGGYSLAQEWLEIPPGR*SCHWGF
Trigger: GAAACCCCAGTGACAGCTGCATCTCCCAGGCGGGAT...CTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp CCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGGCTCAGCTGATAAGCAATGTCTTCTaGCCATCCAGCATGGGAAGT +
Preference number: 4 (lower is better)
Translates to: PRQELLVKRGPGPVGAQLISNVF*PSSMGS
Trigger: ACTTCCCATGCTGGATGGGCAGAAGACATTGCTTAT...CAGCTGAGCCCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp GGGATGCCTGCGGATGTGGAGATTCCAGCTCCCACCAAACAGATGACTCTGCGAAGGCTAAAAGATGGCTaGAGACAGCTGCTCGCCTGC +
Preference number: 4 (lower is better)
Translates to: GMPADVEIPAPTKQMTLRRLKDG*RQLLAC
Trigger: GCAGGCGAGCAGCTGTCTGCAGCCATCTTTTAGCCT...TCGCAGAGTCATCTGTTTGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423526.5
ENST00000634761.1
CDS-3UTR GCA 90 bp GGATGGAGAGCGAAAGTCGGGGATGCCTGCGGATGTGGAGATTCCAGCTCCCACATGCTTTGTAGCCACTaGCTGTGTTGTCTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: GWRAKVGDACGCGDSSSHMLCSH*LCCLWG
Trigger: GCCCCAAAGACAACACAGGCAGTGGCTACAAAGCAT...GTGGGAGCTGGAATCTCCACATCCGCAGGCATCCCCGACTTTCGCTCTCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423526.5
ENST00000634761.1
CDS-3UTR CCA 90 bp CAAATGCTTTGTAGCCACTGCCTGTGTTGTCTTTGGGGCCTGCCCAGGCTAAAAAGCAGACGCTCCTTCTaGCTGCCCAGGCTGAGCGTC +
Preference number: 4 (lower is better)
Translates to: QMLCSHCLCCLWGLPRLKSRRSF*LPRLSV
Trigger: GACGCTCAGCCTGGGCAGCCAGAAGGAGCGTCTGCT...TTTTAGCCTGGGCAGGCCCCAAAGACAACACAGGCAGTGGCTACAAAGCATTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423526.5
ENST00000634761.1
CDS-3UTR CCA 90 bp CTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTAGGATGCCTGCGGATGTaGAGATTCCAGCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: LRWVWVIFRGPHPHWGRLGCLRM*RFQLPP
Trigger: TGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCC...TAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CACCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTATGTTCTGGGATGCCTGCGGATGTaGAGATTCCAGCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: HQVLLFQPGYSLQGIYVLGCLRM*RFQLPP
Trigger: TGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCC...CAGAACATAGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR CCA 90 bp TCGGGGATGCCTGCGGATGTGGAGATTCCAGCTCCCACCAAACAGATGACTCTGATAGAGGCCGGTGGATaGAGAGCGAAAGTCGGGGAT +
Preference number: 4 (lower is better)
Translates to: SGMPADVEIPAPTKQMTLIEAGG*RAKVGD
Trigger: ATCCCCGACTTTCGCTCTCCATCCACCGGCCTCTAT...CAGAGTCATCTGTTTGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCCCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000423526.5
ENST00000443898.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
ENST00000635694.1
CDS-3UTR CCA 90 bp CCTCCACCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTATGTATAGAGGCCGGTGGATaGAGAGCGAAAGTCGGGGAT +
Preference number: 4 (lower is better)
Translates to: PPPSPPVPARLFAPGYLCIEAGG*RAKVGD
Trigger: ATCCCCGACTTTCGCTCTCCATCCACCGGCCTCTAT...ACATAGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR CCA 90 bp CCTCCACCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTATGTTGTCATAGAGGCCGGTaGATGGAGAGCGAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: PPPSPPVPARLFAPGYLCCHRGR*MESESR
Trigger: CCGACTTTCGCTCTCCATCCACCGGCCTCTATGACA...ACATAGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGGTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR CCA 90 bp AAGTGGGTCCCACGTGAAGGGGGCCCACCACCCACTTTGGGAGCTGAAGGCAGACTCAAAGATGGCCTCTaGGTAGGGAAGATGGTACTT +
Preference number: 4 (lower is better)
Translates to: KWVPREGGPPPTLGAEGRLKDGL*VGKMVL
Trigger: AAGTACCATCTTCCCTACCCAGAGGCCATCTTTGAG...TCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCCCCCTTCACGTGGGACCCACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GTGATGTGTAGAAGGTGCCGTGCGCCTCCACCAAGTCCTCCTGTTCCAGCCCGGCTCAAAGATGGCCTCTaGGTAGGGAAGATGGTACTT +
Preference number: 4 (lower is better)
Translates to: VMCRRCRAPPPSPPVPARLKDGL*VGKMVL
Trigger: AAGTACCATCTTCCCTACCCAGAGGCCATCTTTGAG...CCGGGCTGGAACAGGAGGACTTGGTGGAGGCGCACGGCACCTTCTACACATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR CCA 90 bp TGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTCAGGATAGAGTTCCTTaGCGAGGGCGAAGAAGGGTT +
Preference number: 4 (lower is better)
Translates to: CSELPRQELLVKRGPGPVQDRVP*RGRRRV
Trigger: AACCCTTCTTCGCCCTCGCCAAGGAACTCTATCCTG...AACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCAGTAGTGACAGATGGTTaGCTTGAACTGCCCAGGATA +
Preference number: 4 (lower is better)
Translates to: PSRLRLPLRWVWVIFRGPVVTDG*LELPRI
Trigger: TATCCTGGGCAGTTCAAGCCAACCATCTGTCACTAC...TGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GTGCGCCTCCACCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCGTAGTGACAGATGGTTaGCTTGAACTGCCCAGGATA +
Preference number: 4 (lower is better)
Translates to: VRLHQVLLFQPGYSLQGIVVTDG*LELPRI
Trigger: TATCCTGGGCAGTTCAAGCCAACCATCTGTCACTAC...GATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGGTGGAGGCGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
CDS-3UTR CCA 90 bp CAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGCCCTGTAGGCCTTCTTaGAGTCAAAGTCCATGCCTC +
Preference number: 4 (lower is better)
Translates to: QTPPTLGVGYIQRPTPTLPCRPS*SQSPCL
Trigger: GAGGCATGGACTTTGACTCCAAGAAGGCCTACAGGG...CAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249396.12
ENST00000392081.6
ENST00000634533.2
ENST00000635478.1
CDS-3UTR CCA 90 bp GTGGGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGACTGGGCATCTATGCTaGCGTGCTCCCTCCGGACAA +
Preference number: 4 (lower is better)
Translates to: VGAVRDEGGYSLAQEWLETGHLC*RAPSGQ
Trigger: TTGTCCGGAGGGAGCACGCCAGCATAGATGCCCAGT...CTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp ATAAGCAATGTCTTCTGCCCATCCAGCATGGGAAGTGGGTCCCACGTGAAGGGGACTGGGCATCTATGCTaGCGTGCTCCCTCCGGACAA +
Preference number: 4 (lower is better)
Translates to: ISNVFCPSSMGSGSHVKGTGHLC*RAPSGQ
Trigger: TTGTCCGGAGGGAGCACGCCAGCATAGATGCCCAGT...CCCCTTCACGTGGGACCCACTTCCCATGCTGGATGGGCAGAAGACATTGCTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGACAGTGGCGGGGACTTCTTaGGGGAAGCTGAAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GAVRDEGGYSLAQEWLETVAGTS*GKLKCW
Trigger: CCAGCACTTCAGCTTCCCCCAAGAAGTCCCCGCCAC...TGTCTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CTTAGCCCAGGAGTGGTTAGAGACAGTGGGGCTGGTAGAGATGCCTGTTTAAGCGTGGCGGGGACTTCTTaGGGGAAGCTGAAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LSPGVVRDSGAGRDACLSVAGTS*GKLKCW
Trigger: CCAGCACTTCAGCTTCCCCCAAGAAGTCCCCGCCAC...GCTTAAACAGGCATCTCTACCAGCCCCACTGTCTCTAACCACTCCTGGGCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GGGATGCCTGCGGATGTGGAGATTCCAGCTCCCACCAAACAGATGACTCTGCGATCTGAATCTGAGTCCTaGAAGGGGTGGGGTGGAGTG +
Preference number: 4 (lower is better)
Translates to: GMPADVEIPAPTKQMTLRSESES*KGWGGV
Trigger: CACTCCACCCCACCCCTTCCAGGACTCAGATTCAGA...TCGCAGAGTCATCTGTTTGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
CDS-3UTR CCA 90 bp TTCCAGCCCGGCTATTCGCTCCAGGGTATCTATGTTCTGCGTGTAGCAGCGCAGGTAGTGACAGATGGTTaGCCCCAGGGAACCGTCACA +
Preference number: 4 (lower is better)
Translates to: FQPGYSLQGIYVLRVAAQVVTDG*PQGTVT
Trigger: TGTGACGGTTCCCTGGGGCCAACCATCTGTCACTAC...CTGCGCTGCTACACGCAGAACATAGATACCCTGGAGCGAATAGCCGGGCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420440.5
ENST00000635486.1
CDS-3UTR TCA 90 bp ATAGAGGCCGGTGGATGGAGAGCGAAAGTCGGGGATGCCTGCGGATGTGGAGATGACAGATGGTTGGCTTaGACTGCCCAGGATAGAGTT +
Preference number: 4 (lower is better)
Translates to: IEAGGWRAKVGDACGCGDDRWLA*TAQDRV
Trigger: AACTCTATCCTGGGCAGTTCAAGCCAACCATCTGTC...ATCTCCACATCCGCAGGCATCCCCGACTTTCGCTCTCCATCCACCGGCCTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
CDS-3UTR TCA 90 bp ATCTTCTCTTTCATCCAGCTTAGCGGGTATTCGTGCCGGCAGCTGGCGCTGACGCCTTCAGCAGGCGCATaGAGTAGTGACAGATGGTTG +
Preference number: 4 (lower is better)
Translates to: IFSFIQLSGYSCRQLALTPSAGA*SSDRWL
Trigger: CAACCATCTGTCACTACTTCATGCGCCTGCTGAAGG...CGTCAGCGCCAGCTGCCGGCACGAATACCCGCTAAGCTGGATGAAAGAGAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR TCA 90 bp TTCCAGCCCGGCTATTCGCTCCAGGGTATCTATGTTCTGCGTGTAGCAGCGCAGCCTTCAGCAGGCGCATaGAGTAGTGACAGATGGTTG +
Preference number: 4 (lower is better)
Translates to: FQPGYSLQGIYVLRVAAQPSAGA*SSDRWL
Trigger: CAACCATCTGTCACTACTTCATGCGCCTGCTGAAGG...CTGCGCTGCTACACGCAGAACATAGATACCCTGGAGCGAATAGCCGGGCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR TCA 90 bp GTCGGGGATGCCTGCGGATGTGGAGATTCCAGCTCCCACCAAACAGATGACTCTCCTTCAGCAGGCGCATaGAGTAGTGACAGATGGTTG +
Preference number: 4 (lower is better)
Translates to: VGDACGCGDSSSHQTDDSPSAGA*SSDRWL
Trigger: CAACCATCTGTCACTACTTCATGCGCCTGCTGAAGG...AGAGTCATCTGTTTGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCCCCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
CDS-3UTR TCA 90 bp TGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTAGGTATGGGCTTCACCAGGCTCTaGCAGTCTTCACACTTGGGC +
Preference number: 4 (lower is better)
Translates to: WVWVIFRGPHPHWGRLGMGFTRL*QSSHLG
Trigger: GCCCAAGTGTGAAGACTGTCAGAGCCTGGTGAAGCC...CATACCTAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp GGTAGGGAAGATGGTACTTCTCTAGGTTGTCATAGAGGCCGGTGGATGGAGAGCCAGGAAGTCCATGTCTaGTTCTCCACCAGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: GREDGTSLGCHRGRWMESQEVHV*FSTSGS
Trigger: GGAGCCGCTGGTGGAGAAGCAGACATGGACTTCCTG...GCTCTCCATCCACCGGCCTCTATGACAACCTAGAGAAGTACCATCTTCCCTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000423526.5
ENST00000443898.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
ENST00000635694.1
CDS-3UTR GCA 90 bp GAGATTGGGGGATGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGAAAGTCGGGGATGCCTaGGGATGTGGAGATTCCAGC +
Preference number: 4 (lower is better)
Translates to: EIGGCSELPRQELLVKRGKVGDA*GCGDSS
Trigger: GCTGGAATCTCCACATCCGCAGGCATCCCCGACTTT...CCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACATCCCCCAATCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp AAGTCGGGGATGCCTGCGGATGTGGAGATTCCAGCTCCCACCAAACAGATGACTAAAGTCGGGGATGCCTaGGGATGTGGAGATTCCAGC +
Preference number: 4 (lower is better)
Translates to: KSGMPADVEIPAPTKQMTKVGDA*GCGDSS
Trigger: GCTGGAATCTCCACATCCGCAGGCATCCCCGACTTT...AGTCATCTGTTTGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCCCCGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000423526.5
ENST00000443898.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
ENST00000635694.1
CDS-3UTR GCA 90 bp TCCACCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTATGTTCAAAGTCGGGGATGCCTaGGGATGTGGAGATTCCAGC +
Preference number: 4 (lower is better)
Translates to: STKSSCSSPAIRSRVSMFKVGDA*GCGDSS
Trigger: GCTGGAATCTCCACATCCGCAGGCATCCCCGACTTT...GAACATAGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR GCA 90 bp GTGGGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGAGCGAAAGTCGGGGATaGCTGCGGATGTGGAGATTC +
Preference number: 4 (lower is better)
Translates to: VGAVRDEGGYSLAQEWLESESRG*LRMWRF
Trigger: GAATCTCCACATCCGCAGGCATCCCCGACTTTCGCT...CTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp GAGATTGGGGGATGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGGTGATGTGTAGAAGGTaGCGTGCGCCTCCACCAAGT +
Preference number: 4 (lower is better)
Translates to: EIGGCSELPRQELLVKRGVMCRR*RAPPPS
Trigger: ACTTGGTGGAGGCGCACGGCACCTTCTACACATCAC...CCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACATCCCCCAATCTC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp GTGGGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGGTGATGTGTAGAAGGTaGCGTGCGCCTCCACCAAGT +
Preference number: 4 (lower is better)
Translates to: VGAVRDEGGYSLAQEWLEVMCRR*RAPPPS
Trigger: ACTTGGTGGAGGCGCACGGCACCTTCTACACATCAC...CTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp TCCACCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTATGTTCGTGATGTGTAGAAGGTaGCGTGCGCCTCCACCAAGT +
Preference number: 4 (lower is better)
Translates to: STKSSCSSPAIRSRVSMFVMCRR*RAPPPS
Trigger: ACTTGGTGGAGGCGCACGGCACCTTCTACACATCAC...GAACATAGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR GCA 90 bp TCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGTTCAGGAAGTCTGACTaGATACAGGAGAAGAAACGC +
Preference number: 4 (lower is better)
Translates to: SELPRQELLVKRGPGPVGFRKSD*IQEKKR
Trigger: GCGTTTCTTCTCCTGTATGCAGTCAGACTTCCTGAA...CCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp CCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGGCTCAGCTGTTTCAGGAAGTCTGACTaGATACAGGAGAAGAAACGC +
Preference number: 4 (lower is better)
Translates to: PDKNCWLRGGQARLGLSCFRKSD*IQEKKR
Trigger: GCGTTTCTTCTCCTGTATGCAGTCAGACTTCCTGAA...ACAGCTGAGCCCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp CTTAGCCCAGGAGTGGTTAGAGACAGTGGGGCTGGTAGAGATGCCTGTTTAAGCGCAAAGGGCTGCACCTaGAAGGAGGTACCCATGACC +
Preference number: 4 (lower is better)
Translates to: LSPGVVRDSGAGRDACLSAKGCT*KEVPMT
Trigger: GGTCATGGGTACCTCCTTGCAGGTGCAGCCCTTTGC...GCTTAAACAGGCATCTCTACCAGCCCCACTGTCTCTAACCACTCCTGGGCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249396.12
ENST00000392081.6
ENST00000634533.2
ENST00000635478.1
CDS-3UTR GCA 90 bp GTGGGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGTCCCCAGACAAGAACTaGTGGTTAAGAGGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: VGAVRDEGGYSLAQEWLESPDKN*WLRGGQ
Trigger: CTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGA...CTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp CTTAGCCCAGGAGTGGTTAGAGACAGTGGGGCTGGTAGAGATGCCTGTTTAAGCGAGGTGTTAGAGATTTaGTGGGGTTGGGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LSPGVVRDSGAGRDACLSEVLEI*WGWGPG
Trigger: CCCTGGCCCCCAACCCCAGCAAATCTCTAACACCTC...GCTTAAACAGGCATCTCTACCAGCCCCACTGTCTCTAACCACTCCTGGGCTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp CGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAATAAGCAATGTCTTCTaGCCATCCAGCATGGGAAGT +
Preference number: 4 (lower is better)
Translates to: REPSRLRLPLRWVWVIFRISNVF*PSSMGS
Trigger: ACTTCCCATGCTGGATGGGCAGAAGACATTGCTTAT...TCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp AAGTGGGTCCCACGTGAAGGGGGCCCACCACCCACTTTGGGAGCTGAAGGCAGAATAAGCAATGTCTTCTaGCCATCCAGCATGGGAAGT +
Preference number: 4 (lower is better)
Translates to: KWVPREGGPPPTLGAEGRISNVF*PSSMGS
Trigger: ACTTCCCATGCTGGATGGGCAGAAGACATTGCTTAT...TCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCCCCCTTCACGTGGGACCCACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp CTTAGCCCAGGAGTGGTTAGAGACAGTGGGGCTGGTAGAGATGCCTGTTTAAGCACTCTCAGCAGACATTaGGGCCGCAGACGCGCTTTC +
Preference number: 4 (lower is better)
Translates to: LSPGVVRDSGAGRDACLSTLSRH*GRRRAF
Trigger: GAAAGCGCGTCTGCGGCCGCAATGTCTGCTGAGAGT...GCTTAAACAGGCATCTCTACCAGCCCCACTGTCTCTAACCACTCCTGGGCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358931.9
ENST00000392081.6
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CACAAGGAACAAATGCTTTGTAGCCACTGCCTGTGTTGTCTTTGGGGCCTGCCCGGATGCCTGCGGATGTaGAGATTCCAGCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: HKEQMLCSHCLCCLWGLPGCLRM*RFQLPP
Trigger: TGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCC...GGGCAGGCCCCAAAGACAACACAGGCAGTGGCTACAAAGCATTTGTTCCTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423526.5
ENST00000634761.1
CDS-3UTR CCA 90 bp TCCACCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTATGTTCATAGAGGCCGGTGGATaGAGAGCGAAAGTCGGGGAT +
Preference number: 4 (lower is better)
Translates to: STKSSCSSPAIRSRVSMFIEAGG*RAKVGD
Trigger: ATCCCCGACTTTCGCTCTCCATCCACCGGCCTCTAT...GAACATAGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR CCA 90 bp ACTTCTCTAGGTTGTCATAGAGGCCGGTGGATGGAGAGCGAAAGTCGGGGATGCATAGAGGCCGGTGGATaGAGAGCGAAAGTCGGGGAT +
Preference number: 4 (lower is better)
Translates to: TSLGCHRGRWMESESRGCIEAGG*RAKVGD
Trigger: ATCCCCGACTTTCGCTCTCCATCCACCGGCCTCTAT...GCATCCCCGACTTTCGCTCTCCATCCACCGGCCTCTATGACAACCTAGAGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000423526.5
ENST00000443898.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
ENST00000635694.1
CDS-3UTR CCA 90 bp TCGGGGATGCCTGCGGATGTGGAGATTCCAGCTCCCACCAAACAGATGACTCTGCAGGATAGAGTTCCTTaGCGAGGGCGAAGAAGGGTT +
Preference number: 4 (lower is better)
Translates to: SGMPADVEIPAPTKQMTLQDRVP*RGRRRV
Trigger: AACCCTTCTTCGCCCTCGCCAAGGAACTCTATCCTG...CAGAGTCATCTGTTTGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443898.5
ENST00000451193.5
ENST00000635627.1
ENST00000635694.1
CDS-3UTR CCA 90 bp AGCGAAAGTCGGGGATGCCTGCGGATGTGGAGATTCCAGCTCCCACCAAACAGACAGGATAGAGTTCCTTaGCGAGGGCGAAGAAGGGTT +
Preference number: 4 (lower is better)
Translates to: SESRGCLRMWRFQLPPNRQDRVP*RGRRRV
Trigger: AACCCTTCTTCGCCCTCGCCAAGGAACTCTATCCTG...TCTGTTTGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCCCCGACTTTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443898.5
ENST00000451193.5
ENST00000635627.1
ENST00000635694.1
CDS-3UTR CCA 90 bp GGGCCCGAAGCTCCCTGTCCTGGAAGAGTTAAAAGTTCTGGGGTAGCCCTGGCCGTAGTGACAGATGGTTaGCTTGAACTGCCCAGGATA +
Preference number: 4 (lower is better)
Translates to: GPEAPCPGRVKSSGVALAVVTDG*LELPRI
Trigger: TATCCTGGGCAGTTCAAGCCAACCATCTGTCACTAC...GGCCAGGGCTACCCCAGAACTTTTAACTCTTCCAGGACAGGGAGCTTCGGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp TGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTAGGTATGGTTTACGCTCGGCATCCCGCCTaGGAGATGCAGCTGTCACTG +
Preference number: 4 (lower is better)
Translates to: WVIFRGPHPHWGRLGMVYARHPA*EMQLSL
Trigger: CAGTGACAGCTGCATCTCCCAGGCGGGATGCCGAGC...GTAAACCATACCTAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGACACCAGACAAGAACTGCTaGTTAAGAGGGGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GAVRDEGGYSLAQEWLETPDKNC*LRGGQA
Trigger: GGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGG...TGTCTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp ACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGGTGCCTGTTTAAGCCTTaGCCTCTAGGAGGTGTTAGA +
Preference number: 4 (lower is better)
Translates to: TPPTLGVGYIQRPTPTLGCLFKP*PLGGVR
Trigger: TCTAACACCTCCTAGAGGCCAAGGCTTAAACAGGCA...CCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp ATAAGCAATGTCTTCTGCCCATCCAGCATGGGAAGTGGGTCCCACGTGAAGGGGTCCTTAGCCCAGGAGTaGTTAGAGACAGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ISNVFCPSSMGSGSHVKGSLAQE*LETVGL
Trigger: CAGCCCCACTGTCTCTAACCACTCCTGGGCTAAGGA...CCCCTTCACGTGGGACCCACTTCCCATGCTGGATGGGCAGAAGACATTGCTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTATGTTCTGCGTTCTGAATCTGAGTCCTaGAAGGGGTGGGGTGGAGTG +
Preference number: 4 (lower is better)
Translates to: QVLLFQPGYSLQGIYVLRSESES*KGWGGV
Trigger: CACTCCACCCCACCCCTTCCAGGACTCAGATTCAGA...ACGCAGAACATAGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
CDS-3UTR TCA 90 bp CCTCCACCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTATGTGACAGATGGTTGGCTTaGACTGCCCAGGATAGAGTT +
Preference number: 4 (lower is better)
Translates to: PPPSPPVPARLFAPGYLCDRWLA*TAQDRV
Trigger: AACTCTATCCTGGGCAGTTCAAGCCAACCATCTGTC...ACATAGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGGTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
CDS-3UTR TCA 90 bp GATTCCAGCTCCCACCAAACAGATGACTCTGCGACAGCGTTCGCTCTGCATGTAAGGGAGGAGAGGGGGTaGTACCAGGTTTGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: DSSSHQTDDSATAFALHVREERG*YQVWGK
Trigger: TTTTCCCCAAACCTGGTATCACCCCCTCTCCTCCCT...TACATGCAGAGCGAACGCTGTCGCAGAGTCATCTGTTTGGTGGGAGCTGGAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
CDS-3UTR GCA 90 bp CTTAGCCCAGGAGTGGTTAGAGACAGTGGGGCTGGTAGAGATGCCTGTTTAAGCAGCGAAAGTCGGGGATaGCTGCGGATGTGGAGATTC +
Preference number: 4 (lower is better)
Translates to: LSPGVVRDSGAGRDACLSSESRG*LRMWRF
Trigger: GAATCTCCACATCCGCAGGCATCCCCGACTTTCGCT...GCTTAAACAGGCATCTCTACCAGCCCCACTGTCTCTAACCACTCCTGGGCTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp CACAAGGAACAAATGCTTTGTAGCCACTGCCTGTGTTGTCTTTGGGGCCTGCCCAGCGAAAGTCGGGGATaGCTGCGGATGTGGAGATTC +
Preference number: 4 (lower is better)
Translates to: HKEQMLCSHCLCCLWGLPSESRG*LRMWRF
Trigger: GAATCTCCACATCCGCAGGCATCCCCGACTTTCGCT...GGGCAGGCCCCAAAGACAACACAGGCAGTGGCTACAAAGCATTTGTTCCTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423526.5
ENST00000634761.1
CDS-3UTR GCA 90 bp GGTAGGGAAGATGGTACTTCTCTAGGTTGTCATAGAGGCCGGTGGATGGAGAGCAGCGAAAGTCGGGGATaGCTGCGGATGTGGAGATTC +
Preference number: 4 (lower is better)
Translates to: GREDGTSLGCHRGRWMESSESRG*LRMWRF
Trigger: GAATCTCCACATCCGCAGGCATCCCCGACTTTCGCT...GCTCTCCATCCACCGGCCTCTATGACAACCTAGAGAAGTACCATCTTCCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000423526.5
ENST00000443898.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
ENST00000635694.1
CDS-3UTR GCA 90 bp CACCCACACTGGGGTAGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGGGGGATAAGCAATGTCTTCTaGCCATCCAGCATGGGAAGT +
Preference number: 4 (lower is better)
Translates to: HPHWGRLGMVYLATGPRGISNVF*PSSMGS
Trigger: ACTTCCCATGCTGGATGGGCAGAAGACATTGCTTAT...CCCCCGGGGGCCTGTGGCTAAGTAAACCATACCTAACCTACCCCAGTGTGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp GTGGATGGAGAGCGAAAGTCGGGGATGCCTGCGGATGTGGAGATTCCAGCTCCCGACACAAGGAACAAATaGTTTGTAGCCACTGCCTGT +
Preference number: 4 (lower is better)
Translates to: VDGERKSGMPADVEIPAPDTRNK*FVATAC
Trigger: ACAGGCAGTGGCTACAAAGCATTTGTTCCTTGTGTC...GGGAGCTGGAATCTCCACATCCGCAGGCATCCCCGACTTTCGCTCTCCATCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423526.5
ENST00000634761.1
CDS-3UTR CCA 90 bp AGGGAAGATGGTACTTCTCTAGGTTGTCATAGAGGCCGGTGGATGGAGAGCGAAGGATGCCTGCGGATGTaGAGATTCCAGCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: REDGTSLGCHRGRWMESEGCLRM*RFQLPP
Trigger: TGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCC...TTCGCTCTCCATCCACCGGCCTCTATGACAACCTAGAGAAGTACCATCTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000423526.5
ENST00000443898.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
ENST00000635694.1
CDS-3UTR CCA 90 bp TGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTAGGTATGATAGAGGCCGGTGGATaGAGAGCGAAAGTCGGGGAT +
Preference number: 4 (lower is better)
Translates to: WVWVIFRGPHPHWGRLGMIEAGG*RAKVGD
Trigger: ATCCCCGACTTTCGCTCTCCATCCACCGGCCTCTAT...CATACCTAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGACAATAGAGGCCGGTGGATaGAGAGCGAAAGTCGGGGAT +
Preference number: 4 (lower is better)
Translates to: GAVRDEGGYSLAQEWLETIEAGG*RAKVGD
Trigger: ATCCCCGACTTTCGCTCTCCATCCACCGGCCTCTAT...TGTCTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp AGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGGGGGCAGGAGACAGAGTGGCTCAAAGATGGCCTCTaGGTAGGGAAGATGGTACTT +
Preference number: 4 (lower is better)
Translates to: RLGMVYLATGPRGQETEWLKDGL*VGKMVL
Trigger: AAGTACCATCTTCCCTACCCAGAGGCCATCTTTGAG...CCACTCTGTCTCCTGCCCCCGGGGGCCTGTGGCTAAGTAAACCATACCTAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGCTCAAAGATGGCCTCTaGGTAGGGAAGATGGTACTT +
Preference number: 4 (lower is better)
Translates to: QTPPTLGVGYIQRPTPTLLKDGL*VGKMVL
Trigger: AAGTACCATCTTCCCTACCCAGAGGCCATCTTTGAG...CAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp AGAAGATCTTCTCTTTCATCCAGCTTAGCGGGTATTCGTGCCGGCAGCTGGCGCCAGGATAGAGTTCCTTaGCGAGGGCGAAGAAGGGTT +
Preference number: 4 (lower is better)
Translates to: RRSSLSSSLAGIRAGSWRQDRVP*RGRRRV
Trigger: AACCCTTCTTCGCCCTCGCCAAGGAACTCTATCCTG...GCGCCAGCTGCCGGCACGAATACCCGCTAAGCTGGATGAAAGAGAAGATCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR CCA 90 bp AAGTCGGGGATGCCTGCGGATGTGGAGATTCCAGCTCCCACCAAACAGATGACTCAGGATAGAGTTCCTTaGCGAGGGCGAAGAAGGGTT +
Preference number: 4 (lower is better)
Translates to: KSGMPADVEIPAPTKQMTQDRVP*RGRRRV
Trigger: AACCCTTCTTCGCCCTCGCCAAGGAACTCTATCCTG...AGTCATCTGTTTGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCCCCGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443898.5
ENST00000451193.5
ENST00000635627.1
ENST00000635694.1
CDS-3UTR CCA 90 bp GAGATTGGGGGATGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCAGGATAGAGTTCCTTaGCGAGGGCGAAGAAGGGTT +
Preference number: 4 (lower is better)
Translates to: EIGGCSELPRQELLVKRGQDRVP*RGRRRV
Trigger: AACCCTTCTTCGCCCTCGCCAAGGAACTCTATCCTG...CCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACATCCCCCAATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp TCCACCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTATGTTCCAGGATAGAGTTCCTTaGCGAGGGCGAAGAAGGGTT +
Preference number: 4 (lower is better)
Translates to: STKSSCSSPAIRSRVSMFQDRVP*RGRRRV
Trigger: AACCCTTCTTCGCCCTCGCCAAGGAACTCTATCCTG...GAACATAGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR CCA 90 bp AGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGGGGGCAGGAGACAGAGTGGGTAGTGACAGATGGTTaGCTTGAACTGCCCAGGATA +
Preference number: 4 (lower is better)
Translates to: RLGMVYLATGPRGQETEWVVTDG*LELPRI
Trigger: TATCCTGGGCAGTTCAAGCCAACCATCTGTCACTAC...CCACTCTGTCTCCTGCCCCCGGGGGCCTGTGGCTAAGTAAACCATACCTAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTAAGGAAAGGGTCCGACTaGCCAGCTTTCTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: LRWVWVIFRGPHPHWGRLRKGSD*PAFSLL
Trigger: CAACAAGGAGAAAGCTGGCCAGTCGGACCCTTTCCT...TAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249396.12
ENST00000392081.6
ENST00000634533.2
ENST00000635478.1
CDS-3UTR CCA 90 bp ATAAGCAATGTCTTCTGCCCATCCAGCATGGGAAGTGGGTCCCACGTGAAGGGGAGGAAAGGGTCCGACTaGCCAGCTTTCTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: ISNVFCPSSMGSGSHVKGRKGSD*PAFSLL
Trigger: CAACAAGGAGAAAGCTGGCCAGTCGGACCCTTTCCT...CCCCTTCACGTGGGACCCACTTCCCATGCTGGATGGGCAGAAGACATTGCTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249396.12
ENST00000392081.6
ENST00000634533.2
ENST00000635478.1
CDS-3UTR CCA 90 bp TGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTAGGTATGGTTTACGTGGCGGGGACTTCTTaGGGGAAGCTGAAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: WVIFRGPHPHWGRLGMVYVAGTS*GKLKCW
Trigger: CCAGCACTTCAGCTTCCCCCAAGAAGTCCCCGCCAC...GTAAACCATACCTAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GGCCCACACCCACACTGGGGTAGGTTAGGTATGGTTTACTTAGCCACAGGCCCCTGCCTGTTTAAGCCTTaGCCTCTAGGAGGTGTTAGA +
Preference number: 4 (lower is better)
Translates to: GPHPHWGRLGMVYLATGPCLFKP*PLGGVR
Trigger: TCTAACACCTCCTAGAGGCCAAGGCTTAAACAGGCA...GGGGCCTGTGGCTAAGTAAACCATACCTAACCTACCCCAGTGTGGGTGTGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp AGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGGGGGCAGGAGACAGAGTGGTGCCTGTTTAAGCCTTaGCCTCTAGGAGGTGTTAGA +
Preference number: 4 (lower is better)
Translates to: RLGMVYLATGPRGQETEWCLFKP*PLGGVR
Trigger: TCTAACACCTCCTAGAGGCCAAGGCTTAAACAGGCA...CCACTCTGTCTCCTGCCCCCGGGGGCCTGTGGCTAAGTAAACCATACCTAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp TGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTTGCCTGTTTAAGCCTTaGCCTCTAGGAGGTGTTAGA +
Preference number: 4 (lower is better)
Translates to: CSELPRQELLVKRGPGPVCLFKP*PLGGVR
Trigger: TCTAACACCTCCTAGAGGCCAAGGCTTAAACAGGCA...AACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CTTAGCCCAGGAGTGGTTAGAGACAGTGGGGCTGGTAGAGATGCCTGTTTAAGCTCCTTAGCCCAGGAGTaGTTAGAGACAGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LSPGVVRDSGAGRDACLSSLAQE*LETVGL
Trigger: CAGCCCCACTGTCTCTAACCACTCCTGGGCTAAGGA...GCTTAAACAGGCATCTCTACCAGCCCCACTGTCTCTAACCACTCCTGGGCTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp TGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTAGGTATGTCCTTAGCCCAGGAGTaGTTAGAGACAGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: WVWVIFRGPHPHWGRLGMSLAQE*LETVGL
Trigger: CAGCCCCACTGTCTCTAACCACTCCTGGGCTAAGGA...CATACCTAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CTTAGCCCAGGAGTGGTTAGAGACAGTGGGGCTGGTAGAGATGCCTGTTTAAGCGGCCCACACCCACACTaGGGTAGGTTAGGTATGGTT +
Preference number: 4 (lower is better)
Translates to: LSPGVVRDSGAGRDACLSGPHPH*GRLGMV
Trigger: AACCATACCTAACCTACCCCAGTGTGGGTGTGGGCC...GCTTAAACAGGCATCTCTACCAGCCCCACTGTCTCTAACCACTCCTGGGCTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp TGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTAGGTATGGTTTACGAGTCCCAGAAGGCGTaGCGTCAGCAGCCATGTTGG +
Preference number: 4 (lower is better)
Translates to: WVIFRGPHPHWGRLGMVYESQKA*RQQPCW
Trigger: CCAACATGGCTGCTGACGCCACGCCTTCTGGGACTC...GTAAACCATACCTAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358931.9
ENST00000392081.6
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CAAAGATGGCCTCTGGGTAGGGAAGATGGTACTTCTCTAGGTTGTCATAGAGGCGAATCTGAGTCGGTCTaGCTCTGCCATGGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: QRWPLGREDGTSLGCHRGESESV*LCHGRG
Trigger: ACCGCGCCCATGGCAGAGCCAGACCGACTCAGATTC...GCCTCTATGACAACCTAGAGAAGTACCATCTTCCCTACCCAGAGGCCATCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423526.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
CDS-3UTR TCA 90 bp GTGGGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGGACAGATGGTTGGCTTaGACTGCCCAGGATAGAGTT +
Preference number: 4 (lower is better)
Translates to: VGAVRDEGGYSLAQEWLEDRWLA*TAQDRV
Trigger: AACTCTATCCTGGGCAGTTCAAGCCAACCATCTGTC...CTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp CTTAGCCCAGGAGTGGTTAGAGACAGTGGGGCTGGTAGAGATGCCTGTTTAAGCGATTGGGGGATGTTCTaGGCTCCCCAGACAAGAACT +
Preference number: 4 (lower is better)
Translates to: LSPGVVRDSGAGRDACLSDWGMF*APQTRT
Trigger: AGTTCTTGTCTGGGGAGCTCAGAACATCCCCCAATC...GCTTAAACAGGCATCTCTACCAGCCCCACTGTCTCTAACCACTCCTGGGCTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp GGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGACAGATTGGGGGATGTTCTaGGCTCCCCAGACAAGAACT +
Preference number: 4 (lower is better)
Translates to: GAVRDEGGYSLAQEWLETDWGMF*APQTRT
Trigger: AGTTCTTGTCTGGGGAGCTCAGAACATCCCCCAATC...TGTCTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp GGAGGACACAAGGAACAAATGCTTTGTAGCCACTGCCTGTGTTGTCTTTGGGGCCTCCCACCAAACAGATaGCTCTGCGACCCCAGAATC +
Preference number: 4 (lower is better)
Translates to: GGHKEQMLCSHCLCCLWGLPPNR*LCDPRI
Trigger: GATTCTGGGGTCGCAGAGTCATCTGTTTGGTGGGAG...GCCCCAAAGACAACACAGGCAGTGGCTACAAAGCATTTGTTCCTTGTGTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423526.5
ENST00000634761.1
CDS-3UTR GCA 90 bp TTCCGGATGTTTCTTGAAATAGCTGATCTCAAAGATGGCCTCTGGGTAGGGAAGAGAGGGGTCTGGCTCTaGCATGGGCGCGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: FRMFLEIADLKDGLWVGKRGVWL*HGRGAE
Trigger: TTCAGCACCGCGCCCATGGCAGAGCCAGACCCCTCT...CTTCCCTACCCAGAGGCCATCTTTGAGATCAGCTATTTCAAGAAACATCCGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
CDS-3UTR GCA 90 bp TGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTAGGTATGGTTTACCAGGAAGTCCATGTCTaGTTCTCCACCAGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: WVIFRGPHPHWGRLGMVYQEVHV*FSTSGS
Trigger: GGAGCCGCTGGTGGAGAAGCAGACATGGACTTCCTG...GTAAACCATACCTAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp CAAATGCTTTGTAGCCACTGCCTGTGTTGTCTTTGGGGCCTGCCCAGGCTAAAAAAAGTCGGGGATGCCTaGGGATGTGGAGATTCCAGC +
Preference number: 4 (lower is better)
Translates to: QMLCSHCLCCLWGLPRLKKVGDA*GCGDSS
Trigger: GCTGGAATCTCCACATCCGCAGGCATCCCCGACTTT...TTTTAGCCTGGGCAGGCCCCAAAGACAACACAGGCAGTGGCTACAAAGCATTTG
53% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000423526.5
ENST00000634761.1
CDS-3UTR GCA 90 bp TGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTAGGTATGGTTTACGCAAAGGGCTGCACCTaGAAGGAGGTACCCATGACC +
Preference number: 4 (lower is better)
Translates to: WVIFRGPHPHWGRLGMVYAKGCT*KEVPMT
Trigger: GGTCATGGGTACCTCCTTGCAGGTGCAGCCCTTTGC...GTAAACCATACCTAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249396.12
ENST00000392081.6
ENST00000634533.2
ENST00000635478.1
CDS-3UTR GCA 90 bp TGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTAGGTATGGTTTACGAGGTGTTAGAGATTTaGTGGGGTTGGGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: WVIFRGPHPHWGRLGMVYEVLEI*WGWGPG
Trigger: CCCTGGCCCCCAACCCCAGCAAATCTCTAACACCTC...GTAAACCATACCTAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp TGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTAGGTATGGTTTACACTCTCAGCAGACATTaGGGCCGCAGACGCGCTTTC +
Preference number: 4 (lower is better)
Translates to: WVIFRGPHPHWGRLGMVYTLSRH*GRRRAF
Trigger: GAAAGCGCGTCTGCGGCCGCAATGTCTGCTGAGAGT...GTAAACCATACCTAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358931.9
ENST00000392081.6
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp TCTCAAAGATGGCCTCTGGGTAGGGAAGATGGTACTTCTCTAGGTTGTCATAGAGCAGAGCGTTCGCTCTaGATGTACCGGGCCACCCCT +
Preference number: 4 (lower is better)
Translates to: SQRWPLGREDGTSLGCHRAERSL*MYRATP
Trigger: AGGGGTGGCCCGGTACATGCAGAGCGAACGCTCTGC...TCTATGACAACCTAGAGAAGTACCATCTTCCCTACCCAGAGGCCATCTTTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423526.5
ENST00000634761.1
CDS-3UTR GCA 90 bp AGGGAAGATGGTACTTCTCTAGGTTGTCATAGAGGCCGGTGGATGGAGAGCGAAAGGCTAAAAGATGGCTaGAGACAGCTGCTCGCCTGC +
Preference number: 4 (lower is better)
Translates to: REDGTSLGCHRGRWMESERLKDG*RQLLAC
Trigger: GCAGGCGAGCAGCTGTCTGCAGCCATCTTTTAGCCT...TTCGCTCTCCATCCACCGGCCTCTATGACAACCTAGAGAAGTACCATCTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423526.5
ENST00000634761.1
CDS-3UTR GCA 90 bp CCCAGGATAGAGTTCCTTGGCGAGGGCGAAGAAGGGTTCCGGATGTTTCTTGAAAGTGAGCCGAGATCATaGCATTGCACTCTAGCAGCG +
Preference number: 4 (lower is better)
Translates to: PRIEFLGEGEEGFRMFLESEPRS*HCTLAA
Trigger: CGCTGCTAGAGTGCAATGGCATGATCTCGGCTCACT...TTCAAGAAACATCCGGAACCCTTCTTCGCCCTCGCCAAGGAACTCTATCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451193.5
ENST00000635627.1
CDS-3UTR CCA 90 bp TGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTAGGTATGGTTTACGGATGCCTGCGGATGTaGAGATTCCAGCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: WVIFRGPHPHWGRLGMVYGCLRM*RFQLPP
Trigger: TGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCC...GTAAACCATACCTAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GGGATGCCTGCGGATGTGGAGATTCCAGCTCCCACCAAACAGATGACTCTGCGACTCAAAGATGGCCTCTaGGTAGGGAAGATGGTACTT +
Preference number: 4 (lower is better)
Translates to: GMPADVEIPAPTKQMTLRLKDGL*VGKMVL
Trigger: AAGTACCATCTTCCCTACCCAGAGGCCATCTTTGAG...TCGCAGAGTCATCTGTTTGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000423526.5
ENST00000443898.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
ENST00000635694.1
CDS-3UTR CCA 90 bp GGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGACACAGGATAGAGTTCCTTaGCGAGGGCGAAGAAGGGTT +
Preference number: 4 (lower is better)
Translates to: GAVRDEGGYSLAQEWLETQDRVP*RGRRRV
Trigger: AACCCTTCTTCGCCCTCGCCAAGGAACTCTATCCTG...TGTCTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GAGATTGGGGGATGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGAGATGCAGCTGTCACTaGGGTTTCTCCCTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: EIGGCSELPRQELLVKRGRCSCH*GFSLSV
Trigger: AACAGAGAGGGAGAAACCCCAGTGACAGCTGCATCT...CCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACATCCCCCAATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GAGATTGGGGGATGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGAGACTCCCCCTACGCTaGGTGTGGGTTATATTCAGA +
Preference number: 4 (lower is better)
Translates to: EIGGCSELPRQELLVKRGRLPLR*VWVIFR
Trigger: TCTGAATATAACCCACACCCAGCGTAGGGGGAGTCT...CCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACATCCCCCAATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CCTCTGGGTAGGGAAGATGGTACTTCTCTAGGTTGTCATAGAGGCCGGTGGATGTGCCTGTGTTGTCTTTaGGGCCTGCCCAGGCTAAAA +
Preference number: 4 (lower is better)
Translates to: PLGREDGTSLGCHRGRWMCLCCL*GLPRLK
Trigger: TTTTAGCCTGGGCAGGCCCCAAAGACAACACAGGCA...CATCCACCGGCCTCTATGACAACCTAGAGAAGTACCATCTTCCCTACCCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423526.5
ENST00000634761.1
CDS-3UTR TCA 90 bp GGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGACAGACAGATGGTTGGCTTaGACTGCCCAGGATAGAGTT +
Preference number: 4 (lower is better)
Translates to: GAVRDEGGYSLAQEWLETDRWLA*TAQDRV
Trigger: AACTCTATCCTGGGCAGTTCAAGCCAACCATCTGTC...TGTCTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR TCA 90 bp GCAGGAGGACACAAGGAACAAATGCTTTGTAGCCACTGCCTGTGTTGTCTTTGGCTCCCACCAAACAGATaGCTCTGCGACCCCAGAATC +
Preference number: 4 (lower is better)
Translates to: AGGHKEQMLCSHCLCCLWLPPNR*LCDPRI
Trigger: GATTCTGGGGTCGCAGAGTCATCTGTTTGGTGGGAG...CCAAAGACAACACAGGCAGTGGCTACAAAGCATTTGTTCCTTGTGTCCTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423526.5
ENST00000634761.1
CDS-3UTR GCA 90 bp TGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTAGGTATGGTTTACTCCCCAGACAAGAACTaGTGGTTAAGAGGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: WVIFRGPHPHWGRLGMVYSPDKN*WLRGGQ
Trigger: CTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGA...GTAAACCATACCTAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp CACAAGGAACAAATGCTTTGTAGCCACTGCCTGTGTTGTCTTTGGGGCCTGCCCATGCTTTGTAGCCACTaGCTGTGTTGTCTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: HKEQMLCSHCLCCLWGLPMLCSH*LCCLWG
Trigger: GCCCCAAAGACAACACAGGCAGTGGCTACAAAGCAT...GGGCAGGCCCCAAAGACAACACAGGCAGTGGCTACAAAGCATTTGTTCCTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423526.5
ENST00000634761.1
CDS-3UTR CCA 90 bp GCAGGAGGACACAAGGAACAAATGCTTTGTAGCCACTGCCTGTGTTGTCTTTGGATAGAGGCCGGTGGATaGAGAGCGAAAGTCGGGGAT +
Preference number: 4 (lower is better)
Translates to: AGGHKEQMLCSHCLCCLWIEAGG*RAKVGD
Trigger: ATCCCCGACTTTCGCTCTCCATCCACCGGCCTCTAT...CCAAAGACAACACAGGCAGTGGCTACAAAGCATTTGTTCCTTGTGTCCTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423526.5
ENST00000634761.1
CDS-3UTR CCA 90 bp GCAGGAGGACACAAGGAACAAATGCTTTGTAGCCACTGCCTGTGTTGTCTTTGGTGTCATAGAGGCCGGTaGATGGAGAGCGAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: AGGHKEQMLCSHCLCCLWCHRGR*MESESR
Trigger: CCGACTTTCGCTCTCCATCCACCGGCCTCTATGACA...CCAAAGACAACACAGGCAGTGGCTACAAAGCATTTGTTCCTTGTGTCCTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423526.5
ENST00000634761.1
CDS-3UTR CCA 90 bp AGAAGATCTTCTCTTTCATCCAGCTTAGCGGGTATTCGTGCCGGCAGCTGGCGCCTCAAAGATGGCCTCTaGGTAGGGAAGATGGTACTT +
Preference number: 4 (lower is better)
Translates to: RRSSLSSSLAGIRAGSWRLKDGL*VGKMVL
Trigger: AAGTACCATCTTCCCTACCCAGAGGCCATCTTTGAG...GCGCCAGCTGCCGGCACGAATACCCGCTAAGCTGGATGAAAGAGAAGATCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR CCA 90 bp TGGCCTCTGGGTAGGGAAGATGGTACTTCTCTAGGTTGTCATAGAGGCCGGTGGCTCAAAGATGGCCTCTaGGTAGGGAAGATGGTACTT +
Preference number: 4 (lower is better)
Translates to: WPLGREDGTSLGCHRGRWLKDGL*VGKMVL
Trigger: AAGTACCATCTTCCCTACCCAGAGGCCATCTTTGAG...CCACCGGCCTCTATGACAACCTAGAGAAGTACCATCTTCCCTACCCAGAGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000423526.5
ENST00000443898.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
ENST00000635694.1
CDS-3UTR GCA 90 bp CTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTATTCAGGAAGTCTGACTaGATACAGGAGAAGAAACGC +
Preference number: 4 (lower is better)
Translates to: LRWVWVIFRGPHPHWGRLFRKSD*IQEKKR
Trigger: GCGTTTCTTCTCCTGTATGCAGTCAGACTTCCTGAA...TAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGACACTCAAAGATGGCCTCTaGGTAGGGAAGATGGTACTT +
Preference number: 4 (lower is better)
Translates to: GAVRDEGGYSLAQEWLETLKDGL*VGKMVL
Trigger: AAGTACCATCTTCCCTACCCAGAGGCCATCTTTGAG...TGTCTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CACAAGGAACAAATGCTTTGTAGCCACTGCCTGTGTTGTCTTTGGGGCCTGCCCCTCAAAGATGGCCTCTaGGTAGGGAAGATGGTACTT +
Preference number: 4 (lower is better)
Translates to: HKEQMLCSHCLCCLWGLPLKDGL*VGKMVL
Trigger: AAGTACCATCTTCCCTACCCAGAGGCCATCTTTGAG...GGGCAGGCCCCAAAGACAACACAGGCAGTGGCTACAAAGCATTTGTTCCTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423526.5
ENST00000634761.1
CDS-3UTR CCA 90 bp GGTAGGGAAGATGGTACTTCTCTAGGTTGTCATAGAGGCCGGTGGATGGAGAGCCTCAAAGATGGCCTCTaGGTAGGGAAGATGGTACTT +
Preference number: 4 (lower is better)
Translates to: GREDGTSLGCHRGRWMESLKDGL*VGKMVL
Trigger: AAGTACCATCTTCCCTACCCAGAGGCCATCTTTGAG...GCTCTCCATCCACCGGCCTCTATGACAACCTAGAGAAGTACCATCTTCCCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000423526.5
ENST00000443898.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
ENST00000635694.1
CDS-3UTR CCA 90 bp CTTAGCCCAGGAGTGGTTAGAGACAGTGGGGCTGGTAGAGATGCCTGTTTAAGCCTCAAAGATGGCCTCTaGGTAGGGAAGATGGTACTT +
Preference number: 4 (lower is better)
Translates to: LSPGVVRDSGAGRDACLSLKDGL*VGKMVL
Trigger: AAGTACCATCTTCCCTACCCAGAGGCCATCTTTGAG...GCTTAAACAGGCATCTCTACCAGCCCCACTGTCTCTAACCACTCCTGGGCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CTTAGCCCAGGAGTGGTTAGAGACAGTGGGGCTGGTAGAGATGCCTGTTTAAGCGTAGTGACAGATGGTTaGCTTGAACTGCCCAGGATA +
Preference number: 4 (lower is better)
Translates to: LSPGVVRDSGAGRDACLSVVTDG*LELPRI
Trigger: TATCCTGGGCAGTTCAAGCCAACCATCTGTCACTAC...GCTTAAACAGGCATCTCTACCAGCCCCACTGTCTCTAACCACTCCTGGGCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp GGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGACAGTAGTGACAGATGGTTaGCTTGAACTGCCCAGGATA +
Preference number: 4 (lower is better)
Translates to: GAVRDEGGYSLAQEWLETVVTDG*LELPRI
Trigger: TATCCTGGGCAGTTCAAGCCAACCATCTGTCACTAC...TGTCTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CCA 90 bp CCTCTGGGTAGGGAAGATGGTACTTCTCTAGGTTGTCATAGAGGCCGGTGGATGGTAGTGACAGATGGTTaGCTTGAACTGCCCAGGATA +
Preference number: 4 (lower is better)
Translates to: PLGREDGTSLGCHRGRWMVVTDG*LELPRI
Trigger: TATCCTGGGCAGTTCAAGCCAACCATCTGTCACTAC...CATCCACCGGCCTCTATGACAACCTAGAGAAGTACCATCTTCCCTACCCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
CDS-3UTR TCA 90 bp TTCCGGATGTTTCTTGAAATAGCTGATCTCAAAGATGGCCTCTGGGTAGGGAAGAGGGAGGAGAGGGGGTaGTACCAGGTTTGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: FRMFLEIADLKDGLWVGKREERG*YQVWGK
Trigger: TTTTCCCCAAACCTGGTATCACCCCCTCTCCTCCCT...CTTCCCTACCCAGAGGCCATCTTTGAGATCAGCTATTTCAAGAAACATCCGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
CDS-3UTR GCA 90 bp TTCCGGATGTTTCTTGAAATAGCTGATCTCAAAGATGGCCTCTGGGTAGGGAAGAGCGAAAGTCGGGGATaGCTGCGGATGTGGAGATTC +
Preference number: 4 (lower is better)
Translates to: FRMFLEIADLKDGLWVGKSESRG*LRMWRF
Trigger: GAATCTCCACATCCGCAGGCATCCCCGACTTTCGCT...CTTCCCTACCCAGAGGCCATCTTTGAGATCAGCTATTTCAAGAAACATCCGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443898.5
ENST00000451193.5
ENST00000635627.1
ENST00000635694.1
CDS-3UTR GCA 90 bp CACAAGGAACAAATGCTTTGTAGCCACTGCCTGTGTTGTCTTTGGGGCCTGCCCGACACAAGGAACAAATaGTTTGTAGCCACTGCCTGT +
Preference number: 4 (lower is better)
Translates to: HKEQMLCSHCLCCLWGLPDTRNK*FVATAC
Trigger: ACAGGCAGTGGCTACAAAGCATTTGTTCCTTGTGTC...GGGCAGGCCCCAAAGACAACACAGGCAGTGGCTACAAAGCATTTGTTCCTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423526.5
ENST00000634761.1
CDS-3UTR CCA 90 bp AGGGAAGATGGTACTTCTCTAGGTTGTCATAGAGGCCGGTGGATGGAGAGCGAACTCAAAGATGGCCTCTaGGTAGGGAAGATGGTACTT +
Preference number: 4 (lower is better)
Translates to: REDGTSLGCHRGRWMESELKDGL*VGKMVL
Trigger: AAGTACCATCTTCCCTACCCAGAGGCCATCTTTGAG...TTCGCTCTCCATCCACCGGCCTCTATGACAACCTAGAGAAGTACCATCTTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000423526.5
ENST00000443898.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
ENST00000635694.1
CDS-3UTR CCA 90 bp TGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTAGGTATGGTTTACAGACTCCCCCTACGCTaGGTGTGGGTTATATTCAGA +
Preference number: 4 (lower is better)
Translates to: WVIFRGPHPHWGRLGMVYRLPLR*VWVIFR
Trigger: TCTGAATATAACCCACACCCAGCGTAGGGGGAGTCT...GTAAACCATACCTAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR GCA 90 bp CTTGAAATAGCTGATCTCAAAGATGGCCTCTGGGTAGGGAAGATGGTACTTCTCAGTGAGCCGAGATCATaGCATTGCACTCTAGCAGCG +
Preference number: 4 (lower is better)
Translates to: LEIADLKDGLWVGKMVLLSEPRS*HCTLAA
Trigger: CGCTGCTAGAGTGCAATGGCATGATCTCGGCTCACT...GAGAAGTACCATCTTCCCTACCCAGAGGCCATCTTTGAGATCAGCTATTTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451193.5
ENST00000635627.1
CDS-3UTR CCA 90 bp TTTCTTGAAATAGCTGATCTCAAAGATGGCCTCTGGGTAGGGAAGATGGTACTTGGATGCCTGCGGATGTaGAGATTCCAGCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: FLEIADLKDGLWVGKMVLGCLRM*RFQLPP
Trigger: TGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCC...AAGTACCATCTTCCCTACCCAGAGGCCATCTTTGAGATCAGCTATTTCAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443898.5
ENST00000451193.5
ENST00000635627.1
ENST00000635694.1
CDS-3UTR GCA 90 bp TGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTAGGTATGGTTTACTTCAGGAAGTCTGACTaGATACAGGAGAAGAAACGC +
Preference number: 4 (lower is better)
Translates to: WVIFRGPHPHWGRLGMVYFRKSD*IQEKKR
Trigger: GCGTTTCTTCTCCTGTATGCAGTCAGACTTCCTGAA...GTAAACCATACCTAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS GCA 90 bp AGGCAGCCCTGGTCGCATTCACCCAGCCAGGCCACGTCCCTGCGGTaGAGCAGGAGATCAGAGTTCCCAGGCGGGCTCGCCCCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: RQPWSHSPSQATSLR*SRRSEFPGGLAPAC
Trigger: GCAGGCAGGGGCGAGCCCGCCTGGGAACTCTGATCTCCTGCTGCACCGCAGGGACGTGGCCTGGCTGGGTGAATGCGACCAGGGCTGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479290.5
ENST00000635261.1
CDS GCA 90 bp AAGGAGGTACCCATGACCAGGAGGAGGTCCACCTTCAGGAAGTCCTaGGGGGAGGGGCGTGAGCTTGGGAGCCTCCGCCCAGGCTGCGCC +
Preference number: 5 (lower is better)
Translates to: KEVPMTRRRSTFRKS*GEGRELGSLRPGCA
Trigger: GGCGCAGCCTGGGCGGAGGCTCCCAAGCTCACGCCCCTCCCCGCAGGACTTCCTGAAGGTGGACCTCCTCCTGGTCATGGGTACCTCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479290.5
ENST00000635261.1
CDS CCA 90 bp CTCCTCACCTTCCATCCAAGGAGCTCAGCAAGGGCCAGGCAGCCCTaGTCGCATTCACCCAGCCAGGCCACGTCCCTGCGGTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: LLTFHPRSSARARQP*SHSPSQATSLRCSR
Trigger: CCTGCTGCACCGCAGGGACGTGGCCTGGCTGGGTGAATGCGACCAGGGCTGCCTGGCCCTTGCTGAGCTCCTTGGATGGAAGGTGAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479290.5
ENST00000635261.1
CDS-3UTR CAA 90 bp GCAGAGACTCGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTCGCAGGAGTAGCCCCTaGTCCTTCAGCAGGCGCATG +
Preference number: 5 (lower is better)
Translates to: AETREPSRLRLPLRWVWVRRSSP*SFSRRM
Trigger: CATGCGCCTGCTGAAGGACAAGGGGCTACTCCTGCG...AACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCGAGTCTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp GCAGAGACTCGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTGGTGGCGGGGACTTCTaGGGGGAAGCTGAAGTGCTG +
Preference number: 5 (lower is better)
Translates to: AETREPSRLRLPLRWVWVGGGDF*GEAEVL
Trigger: CAGCACTTCAGCTTCCCCCAAGAAGTCCCCGCCACC...AACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCGAGTCTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp GTCCCTGAGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTGTCACTGGGGTTTCGTCCTGGCCTCGTCCTaGGCAGGTGGCGGGGACTTC +
Preference number: 5 (lower is better)
Translates to: VPEELGIPPGRCSCHWGFVLASS*AGGGDF
Trigger: GAAGTCCCCGCCACCTGCCAAGGACGAGGCCAGGAC...GAAACCCCAGTGACAGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
CDS-3UTR CAA 90 bp GCAGAGACTCGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTGGCCCACCACCCACTTaGGGAGCTGAAGGCAGAGAC +
Preference number: 5 (lower is better)
Translates to: AETREPSRLRLPLRWVWVGPPPT*GAEGRD
Trigger: GTCTCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCC...AACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCGAGTCTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp CGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGTCCTGGCCTCGTCCTaGGCAGGTGGCGGGGACTTC +
Preference number: 5 (lower is better)
Translates to: REPSRLRLPLRWVWVIFRVLASS*AGGGDF
Trigger: GAAGTCCCCGCCACCTGCCAAGGACGAGGCCAGGAC...TCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp AAGTGGGTCCCACGTGAAGGGGGCCCACCACCCACTTTGGGAGCTGAAGGCAGAGTCCTGGCCTCGTCCTaGGCAGGTGGCGGGGACTTC +
Preference number: 5 (lower is better)
Translates to: KWVPREGGPPPTLGAEGRVLASS*AGGGDF
Trigger: GAAGTCCCCGCCACCTGCCAAGGACGAGGCCAGGAC...TCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCCCCCTTCACGTGGGACCCACTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp GTTGGGGCTCAGCTGTCCCTGAGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTAGAGATTTGCTGGGGTaGGGGGCCAGGGTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: VGAQLSLRSSASRLGDAARDLLG*GARVAG
Trigger: CCCAGCAACCCTGGCCCCCAACCCCAGCAAATCTCT...AGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCCCAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp TGGGGCTCAGCTGTCCCTGAGGAGCTCGGCATCCCGCCTGGGAGATGCAGCTGTAGAGATTTGCTGGGGTaGGGGGCCAGGGTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: WGSAVPEELGIPPGRCSCRDLLG*GARVAG
Trigger: CCCAGCAACCCTGGCCCCCAACCCCAGCAAATCTCT...ACAGCTGCATCTCCCAGGCGGGATGCCGAGCTCCTCAGGGACAGCTGAGCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
CDS-3UTR CAA 90 bp TCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGGCGGTGCTGAAGCCCTaGAGGCTGTCACCGACCGCT +
Preference number: 5 (lower is better)
Translates to: SELPRQELLVKRGPGPVGAVLKP*RLSPTA
Trigger: AGCGGTCGGTGACAGCCTCAAGGGCTTCAGCACCGC...CCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp CGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGCGGTGCTGAAGCCCTaGAGGCTGTCACCGACCGCT +
Preference number: 5 (lower is better)
Translates to: REPSRLRLPLRWVWVIFRAVLKP*RLSPTA
Trigger: AGCGGTCGGTGACAGCCTCAAGGGCTTCAGCACCGC...TCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp AAGGTGCCGTGCGCCTCCACCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCCGCAGGAGTAGCCCCTaGTCCTTCAGCAGGCGCATG +
Preference number: 5 (lower is better)
Translates to: KVPCASTKSSCSSPAIRSRRSSP*SFSRRM
Trigger: CATGCGCCTGCTGAAGGACAAGGGGCTACTCCTGCG...GGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGGTGGAGGCGCACGGCACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR CAA 90 bp AGTGGGTCCCACGTGAAGGGGGCCCACCACCCACTTTGGGAGCTGAAGGCAGAGGGTGGCGGGGACTTCTaGGGGGAAGCTGAAGTGCTG +
Preference number: 5 (lower is better)
Translates to: SGSHVKGAHHPLWELKAEGGGDF*GEAEVL
Trigger: CAGCACTTCAGCTTCCCCCAAGAAGTCCCCGCCACC...CTCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCCCCCTTCACGTGGGACCCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp CACCCACACTGGGGTAGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGGGGGGTCCTGGCCTCGTCCTaGGCAGGTGGCGGGGACTTC +
Preference number: 5 (lower is better)
Translates to: HPHWGRLGMVYLATGPRGVLASS*AGGGDF
Trigger: GAAGTCCCCGCCACCTGCCAAGGACGAGGCCAGGAC...CCCCCGGGGGCCTGTGGCTAAGTAAACCATACCTAACCTACCCCAGTGTGGGTG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS TCA 90 bp AAGACTTGGGACAGTGTCTGCCCACAGCGTGCGCTGCTTGCCCGGTaGCCCTGCCTACTTCCCCTGAGGGGAACACCTAGGAGGGAGCAC +
Preference number: 5 (lower is better)
Translates to: KTWDSVCPQRALLAR*PCLLPLRGTPRREH
Trigger: GTGCTCCCTCCTAGGTGTTCCCCTCAGGGGAAGTAGGCAGGGTCACCGGGCAAGCAGCGCACGCTGTGGGCAGACACTGTCCCAAGTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479290.5
ENST00000635261.1
CDS GCA 90 bp CACTGCCTGTGTTGTCTTTGGGGCCTGCCCAGGCTAAAAGATGGCTaGAGACAGCTGCTCGCCTGCCGCAGGAGAGGGAGGCTCAGGGCA +
Preference number: 5 (lower is better)
Translates to: HCLCCLWGLPRLKDG*RQLLACRRRGRLRA
Trigger: TGCCCTGAGCCTCCCTCTCCTGCGGCAGGCGAGCAGCTGTCTGCAGCCATCTTTTAGCCTGGGCAGGCCCCAAAGACAACACAGGCAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423526.5
ENST00000634761.1
CDS CCA 90 bp CGGGCCACCCCTTCCAAGGTCAGCTCGTCCAGCAGACGCTCCTTCTaGCTGCCCAGGCTGAGCGTCTGGGAGAATAAGTTCCGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: RATPSKVSSSSRRSF*LPRLSVWENKFRRK
Trigger: CTTCCTGCGGAACTTATTCTCCCAGACGCTCAGCCTGGGCAGCCAGAAGGAGCGTCTGCTGGACGAGCTGACCTTGGAAGGGGTGGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 34 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000381766.8
ENST00000392081.6
ENST00000407552.5
ENST00000414941.5
ENST00000420440.5
ENST00000423526.5
ENST00000437828.5
ENST00000443898.5
ENST00000447739.1
ENST00000451193.5
ENST00000462654.5
ENST00000476771.5
ENST00000479290.5
ENST00000491960.5
ENST00000613542.4
ENST00000634328.1
ENST00000634533.2
ENST00000634572.1
ENST00000634637.1
ENST00000634707.1
ENST00000634761.1
ENST00000634932.1
ENST00000635078.1
ENST00000635086.1
ENST00000635192.1
ENST00000635209.1
ENST00000635261.1
ENST00000635338.1
ENST00000635478.1
ENST00000635486.1
ENST00000635627.1
ENST00000635694.1
CDS CCA 90 bp AGCTCCTTCTTCCATCCAAGGAGCTCAGCAAGGGCCAGGCAGCCCTaGTCGCATTCACCCAGCCAGGCCACGTCCCTGCAAGGAGGTACC +
Preference number: 5 (lower is better)
Translates to: SSFFHPRSSARARQP*SHSPSQATSLQGGT
Trigger: GGTACCTCCTTGCAGGGACGTGGCCTGGCTGGGTGAATGCGACCAGGGCTGCCTGGCCCTTGCTGAGCTCCTTGGATGGAAGAAGGAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
CDS-3UTR CAA 90 bp TCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGCGCAGGAGTAGCCCCTaGTCCTTCAGCAGGCGCATG +
Preference number: 5 (lower is better)
Translates to: SELPRQELLVKRGPGPVGRRSSP*SFSRRM
Trigger: CATGCGCCTGCTGAAGGACAAGGGGCTACTCCTGCG...CCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp CCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGGCTCAGCTGTGGTGGCGGGGACTTCTaGGGGGAAGCTGAAGTGCTG +
Preference number: 5 (lower is better)
Translates to: PDKNCWLRGGQARLGLSCGGGDF*GEAEVL
Trigger: CAGCACTTCAGCTTCCCCCAAGAAGTCCCCGCCACC...ACAGCTGAGCCCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp CGGGAGCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCACCACCCACTTaGGGAGCTGAAGGCAGAGAC +
Preference number: 5 (lower is better)
Translates to: REPSRLRLPLRWVWVIFRGPPPT*GAEGRD
Trigger: GTCTCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCC...TCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGCTCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp AGTGGGTCCCACGTGAAGGGGGCCCACCACCCACTTTGGGAGCTGAAGGCAGAGGCGTCAGCAGCCATGTaGGTAAAGGGCGCCCGGAAA +
Preference number: 5 (lower is better)
Translates to: SGSHVKGAHHPLWELKAEASAAM*VKGARK
Trigger: TTTCCGGGCGCCCTTTACCAACATGGCTGCTGACGC...CTCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCCCCCTTCACGTGGGACCCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358931.9
ENST00000392081.6
ENST00000634707.1
ENST00000635478.1
CDS CCA 90 bp AAGGCACAAGGCCCGGCCCAGCCAGCGGCCTCCAGGAGCCTGCTCTaGCACTGGTACCCAACCCACTGCTACATACTTTGGATGTCACTC +
Preference number: 5 (lower is better)
Translates to: KAQGPAQPAASRSLL*HWYPTHCYILWMSL
Trigger: GAGTGACATCCAAAGTATGTAGCAGTGGGTTGGGTACCAGTGCCAGAGCAGGCTCCTGGAGGCCGCTGGCTGGGCCGGGCCTTGTGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462654.5
ENST00000479290.5
ENST00000635086.1
ENST00000635261.1
CDS-3UTR CAA 90 bp TGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGCGGTGCTGAAGCCCTaGAGGCTGTCACCGACCGCT +
Preference number: 5 (lower is better)
Translates to: CSELPRQELLVKRGPGPVAVLKP*RLSPTA
Trigger: AGCGGTCGGTGACAGCCTCAAGGGCTTCAGCACCGC...AACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp CACCCACACTGGGGTAGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGGGGGCGCAGGAGTAGCCCCTaGTCCTTCAGCAGGCGCATG +
Preference number: 5 (lower is better)
Translates to: HPHWGRLGMVYLATGPRGRRSSP*SFSRRM
Trigger: CATGCGCCTGCTGAAGGACAAGGGGCTACTCCTGCG...CCCCCGGGGGCCTGTGGCTAAGTAAACCATACCTAACCTACCCCAGTGTGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp TGCGCCTCCACCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTCGCAGGAGTAGCCCCTaGTCCTTCAGCAGGCGCATG +
Preference number: 5 (lower is better)
Translates to: CASTKSSCSSPAIRSRVSRRSSP*SFSRRM
Trigger: CATGCGCCTGCTGAAGGACAAGGGGCTACTCCTGCG...AGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGGTGGAGGCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR CAA 90 bp AGTGGGTCCCACGTGAAGGGGGCCCACCACCCACTTTGGGAGCTGAAGGCAGAGTGGCCAGCTTTCTCCTaGTTGATGAGCAGGCGAGGG +
Preference number: 5 (lower is better)
Translates to: SGSHVKGAHHPLWELKAEWPAFS*LMSRRG
Trigger: CCCTCGCCTGCTCATCAACAAGGAGAAAGCTGGCCA...CTCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCCCCCTTCACGTGGGACCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000249396.12
ENST00000392081.6
ENST00000634533.2
ENST00000635478.1
CDS-3UTR CAA 90 bp AAGTGGGTCCCACGTGAAGGGGGCCCACCACCCACTTTGGGAGCTGAAGGCAGAGCGTCAGCAGCCATGTaGGTAAAGGGCGCCCGGAAA +
Preference number: 5 (lower is better)
Translates to: KWVPREGGPPPTLGAEGRASAAM*VKGARK
Trigger: TTTCCGGGCGCCCTTTACCAACATGGCTGCTGACGC...TCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCCCCCTTCACGTGGGACCCACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358931.9
ENST00000392081.6
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp GCCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCAACTCTCAGCAGACATaGCGGCCGCAGACGCGCTTT +
Preference number: 5 (lower is better)
Translates to: ALPAQTPPTLGVGYIQRPNSQQT*RPQTRF
Trigger: AAAGCGCGTCTGCGGCCGCAATGTCTGCTGAGAGTT...GGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358931.9
ENST00000392081.6
ENST00000634707.1
ENST00000635478.1
CDS TCA 90 bp CCAAGGTCAGCTCGTCCAGCAGACGCTCCTTCTGGCTGCCCAGGCTaGGCGTCTGGGAGAATAAGTTCCGCAGGAAGTCCACTGACCGGA +
Preference number: 5 (lower is better)
Translates to: PRSARPADAPSGCPG*ASGRISSAGSPLTG
Trigger: TCCGGTCAGTGGACTTCCTGCGGAACTTATTCTCCCAGACGCTCAGCCTGGGCAGCCAGAAGGAGCGTCTGCTGGACGAGCTGACCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462654.5
ENST00000479290.5
ENST00000635086.1
ENST00000635261.1
CDS GCA 90 bp GTGGAGAGGGGTGCCTTGCTGATGAGGGAGGCAAAGGGCTGCACCTaGAAGGAGGTACCCATGACCAGGAGGAGGTCCACCTTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: VERGALLMREAKGCT*KEVPMTRRRSTFRK
Trigger: CTTCCTGAAGGTGGACCTCCTCCTGGTCATGGGTACCTCCTTGCAGGTGCAGCCCTTTGCCTCCCTCATCAGCAAGGCACCCCTCTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000249396.12
ENST00000392081.6
ENST00000462654.5
ENST00000479290.5
ENST00000613542.4
ENST00000634328.1
ENST00000634533.2
ENST00000635086.1
ENST00000635261.1
ENST00000635478.1
CDS GCA 90 bp GACAGGGAAGGGGATTGTGTTGCCAAAGTCACACGGTGGGTAAGCTaGAGAGCTGAGATTCACACCCAGGCAGCCCGGCTGCAGGGTCCC +
Preference number: 5 (lower is better)
Translates to: DREGDCVAKVTRWVS*RAEIHTQAARLQGP
Trigger: GGGACCCTGCAGCCGGGCTGCCTGGGTGTGAATCTCAGCTCTGCAGCTTACCCACCGTGTGACTTTGGCAACACAATCCCCTTCCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479290.5
ENST00000635261.1
CDS-3UTR CAA 90 bp CCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGGGCTCAGCTGTTGGCCAGCTTTCTCCTaGTTGATGAGCAGGCGAGGG +
Preference number: 5 (lower is better)
Translates to: PDKNCWLRGGQARLGLSCWPAFS*LMSRRG
Trigger: CCCTCGCCTGCTCATCAACAAGGAGAAAGCTGGCCA...ACAGCTGAGCCCCAACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249396.12
ENST00000392081.6
ENST00000634533.2
ENST00000635478.1
CDS-3UTR CAA 90 bp GAGATTGGGGGATGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGGTCCTGGCCTCGTCCTaGGCAGGTGGCGGGGACTTC +
Preference number: 5 (lower is better)
Translates to: EIGGCSELPRQELLVKRGVLASS*AGGGDF
Trigger: GAAGTCCCCGCCACCTGCCAAGGACGAGGCCAGGAC...CCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACATCCCCCAATCTC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp CCCTCCCGGCTCAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCAGTTTCTCCCTCTCTGTaGTCCTGGCCTCGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: PSRLRLPLRWVWVIFRGPVSPSL*SWPRPW
Trigger: CCAAGGACGAGGCCAGGACAACAGAGAGGGAGAAAC...TGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTGAGCCGGGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp AGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGGGGGCAGGAGACAGAGTGGAGAGATTTGCTGGGGTaGGGGGCCAGGGTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: RLGMVYLATGPRGQETEWRDLLG*GARVAG
Trigger: CCCAGCAACCCTGGCCCCCAACCCCAGCAAATCTCT...CCACTCTGTCTCCTGCCCCCGGGGGCCTGTGGCTAAGTAAACCATACCTAACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp CAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGAGAGATTTGCTGGGGTaGGGGGCCAGGGTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: QTPPTLGVGYIQRPTPTLRDLLG*GARVAG
Trigger: CCCAGCAACCCTGGCCCCCAACCCCAGCAAATCTCT...CAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp GGCCCACACCCACACTGGGGTAGGTTAGGTATGGTTTACTTAGCCACAGGCCCCAGAGATTTGCTGGGGTaGGGGGCCAGGGTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: GPHPHWGRLGMVYLATGPRDLLG*GARVAG
Trigger: CCCAGCAACCCTGGCCCCCAACCCCAGCAAATCTCT...GGGGCCTGTGGCTAAGTAAACCATACCTAACCTACCCCAGTGTGGGTGTGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp TGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGGCCCACCACCCACTTaGGGAGCTGAAGGCAGAGAC +
Preference number: 5 (lower is better)
Translates to: CSELPRQELLVKRGPGPVGPPPT*GAEGRD
Trigger: GTCTCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCC...AACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp TCCACCAAGTCCTCCTGTTCCAGCCCGGCTATTCGCTCCAGGGTATCTATGTTCGCGGTGCTGAAGCCCTaGAGGCTGTCACCGACCGCT +
Preference number: 5 (lower is better)
Translates to: STKSSCSSPAIRSRVSMFAVLKP*RLSPTA
Trigger: AGCGGTCGGTGACAGCCTCAAGGGCTTCAGCACCGC...GAACATAGATACCCTGGAGCGAATAGCCGGGCTGGAACAGGAGGACTTGGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420440.5
ENST00000443898.5
ENST00000635486.1
ENST00000635694.1
CDS-3UTR CAA 90 bp AGCGAAAGTCGGGGATGCCTGCGGATGTGGAGATTCCAGCTCCCACCAAACAGACGCAGGAGTAGCCCCTaGTCCTTCAGCAGGCGCATG +
Preference number: 5 (lower is better)
Translates to: SESRGCLRMWRFQLPPNRRRSSP*SFSRRM
Trigger: CATGCGCCTGCTGAAGGACAAGGGGCTACTCCTGCG...TCTGTTTGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCCCCGACTTTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
CDS-3UTR CAA 90 bp GCGAAAGTCGGGGATGCCTGCGGATGTGGAGATTCCAGCTCCCACCAAACAGATCGCAGGAGTAGCCCCTaGTCCTTCAGCAGGCGCATG +
Preference number: 5 (lower is better)
Translates to: AKVGDACGCGDSSSHQTDRRSSP*SFSRRM
Trigger: CATGCGCCTGCTGAAGGACAAGGGGCTACTCCTGCG...ATCTGTTTGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCCCCGACTTTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
CDS-3UTR CAA 90 bp CTTAGCCCAGGAGTGGTTAGAGACAGTGGGGCTGGTAGAGATGCCTGTTTAAGCGTCCTGGCCTCGTCCTaGGCAGGTGGCGGGGACTTC +
Preference number: 5 (lower is better)
Translates to: LSPGVVRDSGAGRDACLSVLASS*AGGGDF
Trigger: GAAGTCCCCGCCACCTGCCAAGGACGAGGCCAGGAC...GCTTAAACAGGCATCTCTACCAGCCCCACTGTCTCTAACCACTCCTGGGCTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp ACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGGGTTTCTCCCTCTCTGTaGTCCTGGCCTCGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: TPPTLGVGYIQRPTPTLGVSPSL*SWPRPW
Trigger: CCAAGGACGAGGCCAGGACAACAGAGAGGGAGAAAC...CCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp AGGCCGGTGGATGGAGAGCGAAAGTCGGGGATGCCTGCGGATGTGGAGATTCCAAACTCTCAGCAGACATaGCGGCCGCAGACGCGCTTT +
Preference number: 5 (lower is better)
Translates to: RPVDGERKSGMPADVEIPNSQQT*RPQTRF
Trigger: AAAGCGCGTCTGCGGCCGCAATGTCTGCTGAGAGTT...TGGAATCTCCACATCCGCAGGCATCCCCGACTTTCGCTCTCCATCCACCGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
CDS TCA 90 bp CCAAGGTCAGCTCGTCCAGCAGACGCTCCTTCTGGCTGCCCAGGCTaGGCGTCTGGGAGAATAAGTTCCGCAGGAAGTCCATGTCTGCTT +
Preference number: 5 (lower is better)
Translates to: PRSARPADAPSGCPG*ASGRISSAGSPCLL
Trigger: AAGCAGACATGGACTTCCTGCGGAACTTATTCTCCCAGACGCTCAGCCTGGGCAGCCAGAAGGAGCGTCTGCTGGACGAGCTGACCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 30 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000381766.8
ENST00000392081.6
ENST00000407552.5
ENST00000414941.5
ENST00000420440.5
ENST00000423526.5
ENST00000437828.5
ENST00000443898.5
ENST00000447739.1
ENST00000451193.5
ENST00000476771.5
ENST00000491960.5
ENST00000613542.4
ENST00000634328.1
ENST00000634533.2
ENST00000634572.1
ENST00000634637.1
ENST00000634707.1
ENST00000634761.1
ENST00000634932.1
ENST00000635078.1
ENST00000635192.1
ENST00000635209.1
ENST00000635338.1
ENST00000635478.1
ENST00000635486.1
ENST00000635627.1
ENST00000635694.1
CDS-3UTR CAA 90 bp GAGATTGGGGGATGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCGCAGGAGTAGCCCCTaGTCCTTCAGCAGGCGCATG +
Preference number: 5 (lower is better)
Translates to: EIGGCSELPRQELLVKRGRRSSP*SFSRRM
Trigger: CATGCGCCTGCTGAAGGACAAGGGGCTACTCCTGCG...CCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACATCCCCCAATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp GTGGGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGGGTGGCGGGGACTTCTaGGGGGAAGCTGAAGTGCTG +
Preference number: 5 (lower is better)
Translates to: VGAVRDEGGYSLAQEWLEGGGDF*GEAEVL
Trigger: CAGCACTTCAGCTTCCCCCAAGAAGTCCCCGCCACC...CTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp GAGATTGGGGGATGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGGGTGGCGGGGACTTCTaGGGGGAAGCTGAAGTGCTG +
Preference number: 5 (lower is better)
Translates to: EIGGCSELPRQELLVKRGGGGDF*GEAEVL
Trigger: CAGCACTTCAGCTTCCCCCAAGAAGTCCCCGCCACC...CCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACATCCCCCAATCTC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 25 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp TGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTGTTTCTCCCTCTCTGTaGTCCTGGCCTCGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: CSELPRQELLVKRGPGPVVSPSL*SWPRPW
Trigger: CCAAGGACGAGGCCAGGACAACAGAGAGGGAGAAAC...AACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp AGGTTAGGTATGGTTTACTTAGCCACAGGCCCCCGGGGGCAGGAGACAGAGTGGGTTTCTCCCTCTCTGTaGTCCTGGCCTCGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: RLGMVYLATGPRGQETEWVSPSL*SWPRPW
Trigger: CCAAGGACGAGGCCAGGACAACAGAGAGGGAGAAAC...CCACTCTGTCTCCTGCCCCCGGGGGCCTGTGGCTAAGTAAACCATACCTAACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp GTGGGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGGGCCCACCACCCACTTaGGGAGCTGAAGGCAGAGAC +
Preference number: 5 (lower is better)
Translates to: VGAVRDEGGYSLAQEWLEGPPPT*GAEGRD
Trigger: GTCTCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCC...CTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp CAGACTCCCCCTACGCTGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGAACTCTCAGCAGACATaGCGGCCGCAGACGCGCTTT +
Preference number: 5 (lower is better)
Translates to: QTPPTLGVGYIQRPTPTLNSQQT*RPQTRF
Trigger: AAAGCGCGTCTGCGGCCGCAATGTCTGCTGAGAGTT...CAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCAGCGTAGGGGGAGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358931.9
ENST00000392081.6
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp TGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGCCAGGCCCGGTTAACTCTCAGCAGACATaGCGGCCGCAGACGCGCTTT +
Preference number: 5 (lower is better)
Translates to: CSELPRQELLVKRGPGPVNSQQT*RPQTRF
Trigger: AAAGCGCGTCTGCGGCCGCAATGTCTGCTGAGAGTT...AACCGGGCCTGGCCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358931.9
ENST00000392081.6
ENST00000634707.1
ENST00000635478.1
CDS CCA 90 bp CTGGGTAGGGAAGATGGTACTTCTCTAGGTTGTCATAGAGGCCGGTaGATGGAGAGCGAAAGTCGGGGATGCCTGCGGCTAGGAAAGGGG +
Preference number: 5 (lower is better)
Translates to: LGREDGTSLGCHRGR*MESESRGCLRLGKG
Trigger: CCCCTTTCCTAGCCGCAGGCATCCCCGACTTTCGCTCTCCATCCACCGGCCTCTATGACAACCTAGAGAAGTACCATCTTCCCTACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479290.5
ENST00000635261.1
CDS-3UTR CAA 90 bp GGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGACACGCAGGAGTAGCCCCTaGTCCTTCAGCAGGCGCATG +
Preference number: 5 (lower is better)
Translates to: GAVRDEGGYSLAQEWLETRRSSP*SFSRRM
Trigger: CATGCGCCTGCTGAAGGACAAGGGGCTACTCCTGCG...TGTCTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp CTTAGCCCAGGAGTGGTTAGAGACAGTGGGGCTGGTAGAGATGCCTGTTTAAGCGGTGGCGGGGACTTCTaGGGGGAAGCTGAAGTGCTG +
Preference number: 5 (lower is better)
Translates to: LSPGVVRDSGAGRDACLSGGGDF*GEAEVL
Trigger: CAGCACTTCAGCTTCCCCCAAGAAGTCCCCGCCACC...GCTTAAACAGGCATCTCTACCAGCCCCACTGTCTCTAACCACTCCTGGGCTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp TGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTAGGTATGAGAGATTTGCTGGGGTaGGGGGCCAGGGTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: WVWVIFRGPHPHWGRLGMRDLLG*GARVAG
Trigger: CCCAGCAACCCTGGCCCCCAACCCCAGCAAATCTCT...CATACCTAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp ATAAGCAATGTCTTCTGCCCATCCAGCATGGGAAGTGGGTCCCACGTGAAGGGGGCGTCAGCAGCCATGTaGGTAAAGGGCGCCCGGAAA +
Preference number: 5 (lower is better)
Translates to: ISNVFCPSSMGSGSHVKGASAAM*VKGARK
Trigger: TTTCCGGGCGCCCTTTACCAACATGGCTGCTGACGC...CCCCTTCACGTGGGACCCACTTCCCATGCTGGATGGGCAGAAGACATTGCTTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358931.9
ENST00000392081.6
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp CGAAAGTCGGGGATGCCTGCGGATGTGGAGATTCCAGCTCCCACCAAACAGATGAACTCTCAGCAGACATaGCGGCCGCAGACGCGCTTT +
Preference number: 5 (lower is better)
Translates to: RKSGMPADVEIPAPTKQMNSQQT*RPQTRF
Trigger: AAAGCGCGTCTGCGGCCGCAATGTCTGCTGAGAGTT...CATCTGTTTGGTGGGAGCTGGAATCTCCACATCCGCAGGCATCCCCGACTTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443898.5
ENST00000635694.1
CDS-3UTR CAA 90 bp ATCTTCTCTTTCATCCAGCTTAGCGGGTATTCGTGCCGGCAGCTGGCGCTGACGAGTAGTGACAGATGGTaGGCCCCAGGGAACCGTCAC +
Preference number: 5 (lower is better)
Translates to: IFSFIQLSGYSCRQLALTSSDRW*APGNRH
Trigger: GTGACGGTTCCCTGGGGCCAACCATCTGTCACTACT...CGTCAGCGCCAGCTGCCGGCACGAATACCCGCTAAGCTGGATGAAAGAGAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420440.5
ENST00000635486.1
CDS GCA 90 bp CCAGCGGCCTCCAGGAGCCTGCTCTGGCACTGGTACCCAACCCACTaGTACATACTTTGGATGTCACTCCTGATGGAGTTGAGGAGGTAT +
Preference number: 5 (lower is better)
Translates to: PAASRSLLWHWYPTH*YILWMSLLMELRRY
Trigger: ATACCTCCTCAACTCCATCAGGAGTGACATCCAAAGTATGTAGCAGTGGGTTGGGTACCAGTGCCAGAGCAGGCTCCTGGAGGCCGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462654.5
ENST00000479290.5
ENST00000635086.1
ENST00000635261.1
CDS CCA 90 bp AAACTGAAGGACAGGGAAGGGGATTGTGTTGCCAAAGTCACACGGTaGGTAAGCTGCAGAGCTGAGATTCACACCCAGGCAGCCCGGCTG +
Preference number: 5 (lower is better)
Translates to: KLKDREGDCVAKVTR*VSCRAEIHTQAARL
Trigger: CAGCCGGGCTGCCTGGGTGTGAATCTCAGCTCTGCAGCTTACCCACCGTGTGACTTTGGCAACACAATCCCCTTCCCTGTCCTTCAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479290.5
ENST00000635261.1
CDS-3UTR CAA 90 bp GAGATTGGGGGATGTTCTGAGCTCCCCAGACAAGAACTGCTGGTTAAGAGGGGGGTTTCTCCCTCTCTGTaGTCCTGGCCTCGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: EIGGCSELPRQELLVKRGVSPSL*SWPRPW
Trigger: CCAAGGACGAGGCCAGGACAACAGAGAGGGAGAAAC...CCCCCTCTTAACCAGCAGTTCTTGTCTGGGGAGCTCAGAACATCCCCCAATCTC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp TGGGTGTGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTAGGTATGGCGTCAGCAGCCATGTaGGTAAAGGGCGCCCGGAAA +
Preference number: 5 (lower is better)
Translates to: WVWVIFRGPHPHWGRLGMASAAM*VKGARK
Trigger: TTTCCGGGCGCCCTTTACCAACATGGCTGCTGACGC...CATACCTAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCACACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358931.9
ENST00000392081.6
ENST00000634707.1
ENST00000635478.1
CDS GCA 90 bp TCTATGCTGGCGTGCTCCCTCCGGACAAGGTCCTCCAGCTCCTTCTaGAGGAGCAAAGGTCACAGAAGTCAAAGGTCACTGTGCATCATG +
Preference number: 5 (lower is better)
Translates to: SMLACSLRTRSSSSF*RSKGHRSQRSLCIM
Trigger: CATGATGCACAGTGACCTTTGACTTCTGTGACCTTTGCTCCTGCAGAAGGAGCTGGAGGACCTTGTCCGGAGGGAGCACGCCAGCATAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479290.5
ENST00000635261.1
CDS-3UTR CAA 90 bp CTTAGCCCAGGAGTGGTTAGAGACAGTGGGGCTGGTAGAGATGCCTGTTTAAGCTGGCCAGCTTTCTCCTaGTTGATGAGCAGGCGAGGG +
Preference number: 5 (lower is better)
Translates to: LSPGVVRDSGAGRDACLSWPAFS*LMSRRG
Trigger: CCCTCGCCTGCTCATCAACAAGGAGAAAGCTGGCCA...GCTTAAACAGGCATCTCTACCAGCCCCACTGTCTCTAACCACTCCTGGGCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249396.12
ENST00000392081.6
ENST00000634533.2
ENST00000635478.1
CDS-3UTR CAA 90 bp GGGGCAGTTAGAGATGAGGGAGGTTACTCCTTAGCCCAGGAGTGGTTAGAGACAGTTTCTCCCTCTCTGTaGTCCTGGCCTCGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: GAVRDEGGYSLAQEWLETVSPSL*SWPRPW
Trigger: CCAAGGACGAGGCCAGGACAACAGAGAGGGAGAAAC...TGTCTCTAACCACTCCTGGGCTAAGGAGTAACCTCCCTCATCTCTAACTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS-3UTR CAA 90 bp TGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTAGGTATGGTTTACGGCCCACCACCCACTTaGGGAGCTGAAGGCAGAGAC +
Preference number: 5 (lower is better)
Translates to: WVIFRGPHPHWGRLGMVYGPPPT*GAEGRD
Trigger: GTCTCTGCCTTCAGCTCCCAAAGTGGGTGGTGGGCC...GTAAACCATACCTAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000392081.6
ENST00000634533.2
ENST00000634707.1
ENST00000635478.1
CDS TCA 90 bp CCCAACCCTTCCTGTTTCGCCCCCTGCAAAACAAAGATCTCACCTTaGACTGCCCAGGATAGAGTTCCTTGGCGAGGGCGAAGAAGGGTT +
Preference number: 5 (lower is better)
Translates to: PNPSCFAPCKTKISP*TAQDRVPWRGRRRV
Trigger: AACCCTTCTTCGCCCTCGCCAAGGAACTCTATCCTGGGCAGTTCAAGGTGAGATCTTTGTTTTGCAGGGGGCGAAACAGGAAGGGTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479290.5
ENST00000635261.1
CDS CCA 90 bp CCAGAGGCTCACCAGGCTTCACCAGGCTCTGACAGTCTTCACACTTaGGCGTCACCTCAGAGAAGATCTTCTCTTTCATCCAGCTTAGCG +
Preference number: 5 (lower is better)
Translates to: PEAHQASPGSDSLHT*ASPQRRSSLSSSLA
Trigger: CGCTAAGCTGGATGAAAGAGAAGATCTTCTCTGAGGTGACGCCCAAGTGTGAAGACTGTCAGAGCCTGGTGAAGCCTGGTGAGCCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479290.5
ENST00000635261.1
CDS-3UTR CAA 90 bp TCTCAAAGATGGCCTCTGGGTAGGGAAGATGGTACTTCTCTAGGTTGTCATAGAGCGGTGCTGAAGCCCTaGAGGCTGTCACCGACCGCT +
Preference number: 5 (lower is better)
Translates to: SQRWPLGREDGTSLGCHRAVLKP*RLSPTA
Trigger: AGCGGTCGGTGACAGCCTCAAGGGCTTCAGCACCGC...TCTATGACAACCTAGAGAAGTACCATCTTCCCTACCCAGAGGCCATCTTTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000423526.5
ENST00000443898.5
ENST00000451193.5
ENST00000634761.1
ENST00000635627.1
ENST00000635694.1
CDS-3UTR CAA 90 bp TGGGTTATATTCAGAGGCCCACACCCACACTGGGGTAGGTTAGGTATGGTTTACTGGCCAGCTTTCTCCTaGTTGATGAGCAGGCGAGGG +
Preference number: 5 (lower is better)
Translates to: WVIFRGPHPHWGRLGMVYWPAFS*LMSRRG
Trigger: CCCTCGCCTGCTCATCAACAAGGAGAAAGCTGGCCA...GTAAACCATACCTAACCTACCCCAGTGTGGGTGTGGGCCTCTGAATATAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249396.12
ENST00000392081.6
ENST00000634533.2
ENST00000635478.1
CDS TCA 90 bp CTCAGTCCCTGGAAGCCCGGCCTTCCTATCTGGCTTCAGCTGGTTTaGGTTGGAATTCTATCACTTGCTCAAAAGGGCAGTGAATGTCCC +
Preference number: 5 (lower is better)
Translates to: LSPWKPGLPIWLQLV*VGILSLAQKGSECP
Trigger: GGGACATTCACTGCCCTTTTGAGCAAGTGATAGAATTCCAACTCAAACCAGCTGAAGCCAGATAGGAAGGCCGGGCTTCCAGGGACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479290.5
ENST00000635261.1
CDS CCA 90 bp TGTGTCTTAGTTTCCTGTAGAATAGGGGTGATCACAAAACCGCGATaGGGTTGTGGCGCCAGTGAGTTCACGCAGGCTAAGACTTGGGAC +
Preference number: 5 (lower is better)
Translates to: CVLVSCRIGVITKPR*GCGASEFTQAKTWD
Trigger: GTCCCAAGTCTTAGCCTGCGTGAACTCACTGGCGCCACAACCCCATCGCGGTTTTGTGATCACCCCTATTCTACAGGAAACTAAGACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479290.5
ENST00000635261.1
CDS CAA 72 bp CCACCTTCAGGAAGTCCTGCGGGGAGGGGCGTGAGCTaGGGAGCCTCCGCCCAGGCTGCGCCACCGCTCCCT +
Preference number: 6 (lower is better)
Translates to: PPSGSPAGRGVS*GASAQAAPPLP
Trigger: AGGGAGCGGTGGCGCAGCCTGGGCGGAGGCTCCCAAGCTCACGCCCCTCCCCGCAGGACTTCCTGAAGGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479290.5
ENST00000635261.1
CDS GCA 72 bp GGGACCCCCGCCCCCGACTGGGCATCTATGCTGGCGTaGTCCCTCCGGACAAGGTCCTCCAGCTCCTTCTGC +
Preference number: 6 (lower is better)
Translates to: GTPAPDWASMLA*SLRTRSSSSFC
Trigger: GCAGAAGGAGCTGGAGGACCTTGTCCGGAGGGAGCACGCCAGCATAGATGCCCAGTCGGGGGCGGGGGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000479290.5
ENST00000635261.1
CDS CAA 72 bp GGGCTAGCTCCAGGGCTCTGGGACAGGCTGCCGGGGTaGGAGTCCTGGCCATGCCCGTCCCCAGGAGCAAGA +
Preference number: 6 (lower is better)
Translates to: GLAPGLWDRLPG*ESWPCPSPGAR
Trigger: TCTTGCTCCTGGGGACGGGCATGGCCAGGACTCCAACCCCGGCAGCCTGTCCCAGAGCCCTGGAGCTAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000381766.8
ENST00000462654.5
ENST00000479290.5
ENST00000634932.1
ENST00000635086.1
ENST00000635261.1
CDS GCA 72 bp CAGCAGGAGATCAGAGTTCCCAGGCGGGCTCGCCCCTaGCTGCTCCTCTCATCTGCCTTCGTGCCCCCGCTC +
Preference number: 6 (lower is better)
Translates to: QQEIRVPRRARP*LLLSSAFVPPL
Trigger: GAGCGGGGGCACGAAGGCAGATGAGAGGAGCAGGCAGGGGCGAGCCCGCCTGGGAACTCTGATCTCCTGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479290.5
ENST00000635261.1
CDS GCA 72 bp TGGTCGCATTCACCCAGCCAGGCCACGTCCCTGCGGTaGAGCAGGAGATCAGAGTTCCCAGGCGGGCTCGCC +
Preference number: 6 (lower is better)
Translates to: WSHSPSQATSLR*SRRSEFPGGLA
Trigger: GGCGAGCCCGCCTGGGAACTCTGATCTCCTGCTGCACCGCAGGGACGTGGCCTGGCTGGGTGAATGCGACCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479290.5
ENST00000635261.1
CDS CCA 72 bp CCAGGGCTCTGGGACAGGCTGCCGGGGTTGGAGTCCTaGCCATGCCCGTCCCCAGGAGCAAGACCTCATGTG +
Preference number: 6 (lower is better)
Translates to: PGLWDRLPGLES*PCPSPGARPHV
Trigger: CACATGAGGTCTTGCTCCTGGGGACGGGCATGGCCAGGACTCCAACCCCGGCAGCCTGTCCCAGAGCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000381766.8
ENST00000462654.5
ENST00000479290.5
ENST00000634932.1
ENST00000635086.1
ENST00000635261.1
CDS CCA 72 bp TTCCATCCAAGGAGCTCAGCAAGGGCCAGGCAGCCCTaGTCGCATTCACCCAGCCAGGCCACGTCCCTGCGG +
Preference number: 6 (lower is better)
Translates to: FHPRSSARARQP*SHSPSQATSLR
Trigger: CCGCAGGGACGTGGCCTGGCTGGGTGAATGCGACCAGGGCTGCCTGGCCCTTGCTGAGCTCCTTGGATGGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479290.5
ENST00000635261.1
CDS TCA 72 bp GACAGTGTCTGCCCACAGCGTGCGCTGCTTGCCCGGTaGCCCTGCCTACTTCCCCTGAGGGGAACACCTAGG +
Preference number: 6 (lower is better)
Translates to: DSVCPQRALLAR*PCLLPLRGTPR
Trigger: CCTAGGTGTTCCCCTCAGGGGAAGTAGGCAGGGTCACCGGGCAAGCAGCGCACGCTGTGGGCAGACACTGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479290.5
ENST00000635261.1
CDS GCA 72 bp GACTTGGGACAGTGTCTGCCCACAGCGTGCGCTGCTTaGCCGGTGACCCTGCCTACTTCCCCTGAGGGGAAC +
Preference number: 6 (lower is better)
Translates to: DLGQCLPTACAA*PVTLPTSPEGN
Trigger: GTTCCCCTCAGGGGAAGTAGGCAGGGTCACCGGGCAAGCAGCGCACGCTGTGGGCAGACACTGTCCCAAGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479290.5
ENST00000635261.1
CDS CCA 72 bp TTCCATCCAAGGAGCTCAGCAAGGGCCAGGCAGCCCTaGTCGCATTCACCCAGCCAGGCCACGTCCCTGCAA +
Preference number: 6 (lower is better)
Translates to: FHPRSSARARQP*SHSPSQATSLQ
Trigger: TTGCAGGGACGTGGCCTGGCTGGGTGAATGCGACCAGGGCTGCCTGGCCCTTGCTGAGCTCCTTGGATGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
CDS TCA 72 bp GGGAGGCAAAGGGCTGCACCTGCAAGGAGGTACCCATaGCCAGGAGGAGGTCCACCTTCAGGAAGTCCTGCG +
Preference number: 6 (lower is better)
Translates to: GRQRAAPARRYP*PGGGPPSGSPA
Trigger: CGCAGGACTTCCTGAAGGTGGACCTCCTCCTGGTCATGGGTACCTCCTTGCAGGTGCAGCCCTTTGCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479290.5
ENST00000635261.1
CDS GCA 72 bp GGTGCCTTGCTGATGAGGGAGGCAAAGGGCTGCACCTaGAAGGAGGTACCCATGACCAGGAGGAGGTCCACC +
Preference number: 6 (lower is better)
Translates to: GALLMREAKGCT*KEVPMTRRRST
Trigger: GGTGGACCTCCTCCTGGTCATGGGTACCTCCTTGCAGGTGCAGCCCTTTGCCTCCCTCATCAGCAAGGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000249396.12
ENST00000392081.6
ENST00000462654.5
ENST00000479290.5
ENST00000613542.4
ENST00000634328.1
ENST00000634533.2
ENST00000635086.1
ENST00000635261.1
ENST00000635478.1
CDS CCA 72 bp GGTTGTGGCGCCAGTGAGTTCACGCAGGCTAAGACTTaGGACAGTGTCTGCCCACAGCGTGCGCTGCTTGCC +
Preference number: 6 (lower is better)
Translates to: GCGASEFTQAKT*DSVCPQRALLA
Trigger: GGCAAGCAGCGCACGCTGTGGGCAGACACTGTCCCAAGTCTTAGCCTGCGTGAACTCACTGGCGCCACAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479290.5
ENST00000635261.1
CDS CAA 72 bp CCCAGGAAAGGGTCCGACTGGCCAGCTTTCTCCTTGTaGATGAGCAGGCGAGGGGTGGAGAGGGGTGCCTTG +
Preference number: 6 (lower is better)
Translates to: PRKGSDWPAFSL*MSRRGVERGAL
Trigger: CAAGGCACCCCTCTCCACCCCTCGCCTGCTCATCAACAAGGAGAAAGCTGGCCAGTCGGACCCTTTCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000249396.12
ENST00000392081.6
ENST00000462654.5
ENST00000613542.4
ENST00000634328.1
ENST00000634533.2
ENST00000635086.1
ENST00000635478.1
CDS CAA 90 bp GGGAGTGGCCGTGATAGGGCACAGAACTACAACTCTCAGCAGACATaGCGGCCGCAGACGCGCTTTCGTACAACACCCAGAGCGCCCCAG +
Preference number: 6 (lower is better)
Translates to: GSGRDRAQNYNSQQT*RPQTRFRTTPRAPQ
Trigger: CTGGGGCGCTCTGGGTGTTGTACGAAAGCGCGTCTGCGGCCGCAATGTCTGCTGAGAGTTGTAGTTCTGTGCCCTATCACGGCCACTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358931.9
ENST00000392081.6
ENST00000414941.5
ENST00000634707.1
ENST00000635078.1
ENST00000635478.1
CDS TCA 72 bp GCTCGTCCAGCAGACGCTCCTTCTGGCTGCCCAGGCTaGGCGTCTGGGAGAATAAGTTCCGCAGGAAGTCCA +
Preference number: 6 (lower is better)
Translates to: ARPADAPSGCPG*ASGRISSAGSP
Trigger: TGGACTTCCTGCGGAACTTATTCTCCCAGACGCTCAGCCTGGGCAGCCAGAAGGAGCGTCTGCTGGACGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 34 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000381766.8
ENST00000392081.6
ENST00000407552.5
ENST00000414941.5
ENST00000420440.5
ENST00000423526.5
ENST00000437828.5
ENST00000443898.5
ENST00000447739.1
ENST00000451193.5
ENST00000462654.5
ENST00000476771.5
ENST00000479290.5
ENST00000491960.5
ENST00000613542.4
ENST00000634328.1
ENST00000634533.2
ENST00000634572.1
ENST00000634637.1
ENST00000634707.1
ENST00000634761.1
ENST00000634932.1
ENST00000635078.1
ENST00000635086.1
ENST00000635192.1
ENST00000635209.1
ENST00000635261.1
ENST00000635338.1
ENST00000635478.1
ENST00000635486.1
ENST00000635627.1
ENST00000635694.1
CDS TCA 72 bp ACCCAGCCAGGCCACGTCCCTGCAAGGAGGTACCCATaGCCAGGAGGAGGTCCACCTTCAGGAAGTCTGACT +
Preference number: 6 (lower is better)
Translates to: TQPGHVPARRYP*PGGGPPSGSLT
Trigger: AGTCAGACTTCCTGAAGGTGGACCTCCTCCTGGTCATGGGTACCTCCTTGCAGGGACGTGGCCTGGCTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358931.9
ENST00000634707.1
CDS CCA 72 bp AGGATGGATCTGGGGCACTGTTCAGAGAGACAGAGGTaGCCAGATGTGTGCGGGTGTGGCCTTTGGGAGGGG +
Preference number: 6 (lower is better)
Translates to: RMDLGHCSERQR*PDVCGCGLWEG
Trigger: CCCCTCCCAAAGGCCACACCCGCACACATCTGGCCACCTCTGTCTCTCTGAACAGTGCCCCAGATCCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479290.5
ENST00000635261.1
CDS TCA 72 bp GGGAGGCAAAGGGCTGCACCTGCAAGGAGGTACCCATaGCCAGGAGGAGGTCCACCTTCAGGAAGTCTGACT +
Preference number: 6 (lower is better)
Translates to: GRQRAAPARRYP*PGGGPPSGSLT
Trigger: AGTCAGACTTCCTGAAGGTGGACCTCCTCCTGGTCATGGGTACCTCCTTGCAGGTGCAGCCCTTTGCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000249396.12
ENST00000392081.6
ENST00000414941.5
ENST00000462654.5
ENST00000613542.4
ENST00000634328.1
ENST00000634533.2
ENST00000635078.1
ENST00000635086.1
ENST00000635478.1
CDS GCA 72 bp GGGGATTGTGTTGCCAAAGTCACACGGTGGGTAAGCTaGAGAGCTGAGATTCACACCCAGGCAGCCCGGCTG +
Preference number: 6 (lower is better)
Translates to: GDCVAKVTRWVS*RAEIHTQAARL
Trigger: CAGCCGGGCTGCCTGGGTGTGAATCTCAGCTCTGCAGCTTACCCACCGTGTGACTTTGGCAACACAATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479290.5
ENST00000635261.1
CDS CCA 72 bp CCTTCCAAGGTCAGCTCGTCCAGCAGACGCTCCTTCTaGCTGCCCAGGCTGAGCGTCTGGGAGAATAAGTTC +
Preference number: 6 (lower is better)
Translates to: PSKVSSSSRRSF*LPRLSVWENKF
Trigger: GAACTTATTCTCCCAGACGCTCAGCCTGGGCAGCCAGAAGGAGCGTCTGCTGGACGAGCTGACCTTGGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 34 transcripts:
ENST00000249396.12
ENST00000358931.9
ENST00000381766.8
ENST00000392081.6
ENST00000407552.5
ENST00000414941.5
ENST00000420440.5
ENST00000423526.5
ENST00000437828.5
ENST00000443898.5
ENST00000447739.1
ENST00000451193.5
ENST00000462654.5
ENST00000476771.5
ENST00000479290.5
ENST00000491960.5
ENST00000613542.4
ENST00000634328.1
ENST00000634533.2
ENST00000634572.1
ENST00000634637.1
ENST00000634707.1
ENST00000634761.1
ENST00000634932.1
ENST00000635078.1
ENST00000635086.1
ENST00000635192.1
ENST00000635209.1
ENST00000635261.1
ENST00000635338.1
ENST00000635478.1
ENST00000635486.1
ENST00000635627.1
ENST00000635694.1
CDS CAA 72 bp CTACGAGTCCCAGAAGGCGTGGCGTCAGCAGCCATGTaGGTAAAGGGCGCCCGGAAAATGTGGGAACGGCTA +
Preference number: 6 (lower is better)
Translates to: LRVPEGVASAAM*VKGARKMWERL
Trigger: TAGCCGTTCCCACATTTTCCGGGCGCCCTTTACCAACATGGCTGCTGACGCCACGCCTTCTGGGACTCGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358931.9
ENST00000392081.6
ENST00000634707.1
ENST00000635478.1
CDS CAA 90 bp AGGACCGGACTACGAGTCCCAGAAGGCGTGGCGTCAGCAGCCATGTaGGTAAAGGGCGCCCGGAAAATGTGGGAACGGCTAGAGAGTTGT +
Preference number: 6 (lower is better)
Translates to: RTGLRVPEGVASAAM*VKGARKMWERLESC
Trigger: ACAACTCTCTAGCCGTTCCCACATTTTCCGGGCGCCCTTTACCAACATGGCTGCTGACGCCACGCCTTCTGGGACTCGTAGTCCGGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358931.9
ENST00000392081.6
ENST00000634707.1
ENST00000635478.1
CDS GCA 72 bp GGAACCGTCACAGCAGCCGCGTCGGGGAGAGACCACTaGTATCCCCAGATCACAGATGAGGAAACTGAAGGA +
Preference number: 6 (lower is better)
Translates to: GTVTAAASGRDH*YPQITDEETEG
Trigger: TCCTTCAGTTTCCTCATCTGTGATCTGGGGATAGCAGTGGTCTCTCCCCGACGCGGCTGCTGTGACGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479290.5
ENST00000635261.1
CDS CCA 72 bp GTCCTTCAGCAGGCGCATGAAGTAGTGACAGATGGTTaGCTGCAGGGAAGAGCGACAGCACTGCTGACGACT +
Preference number: 6 (lower is better)
Translates to: VLQQAHEVVTDG*LQGRATALLTT
Trigger: AGTCGTCAGCAGTGCTGTCGCTCTTCCCTGCAGCCAACCATCTGTCACTACTTCATGCGCCTGCTGAAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479290.5
ENST00000635261.1
CDS CAA 90 bp CAGGAGCCTGCTCTGGCACTGGTACCCAACCCACTGCTACATACTTaGGATGTCACTCCTGATGGAGTTGAGGAGGTATCACCCACACCC +
Preference number: 6 (lower is better)
Translates to: QEPALALVPNPLLHT*DVTPDGVEEVSPTP
Trigger: GGGTGTGGGTGATACCTCCTCAACTCCATCAGGAGTGACATCCAAAGTATGTAGCAGTGGGTTGGGTACCAGTGCCAGAGCAGGCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462654.5
ENST00000479290.5
ENST00000635086.1
ENST00000635261.1
CDS TCA 72 bp CAAGGTCGTAAGATGAAGACACGAGGAACCAGGACTTaGACCGAGGCAGTCTGGGCCCAGCACCCATGTACT +
Preference number: 6 (lower is better)
Translates to: QGRKMKTRGTRT*TEAVWAQHPCT
Trigger: AGTACATGGGTGCTGGGCCCAGACTGCCTCGGTTCAAGTCCTGGTTCCTCGTGTCTTCATCTTACGACCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479290.5
ENST00000635261.1
CDS CCA 72 bp GAAGATGGTACTTCTCTAGGTTGTCATAGAGGCCGGTaGATGGAGAGCGAAAGTCGGGGATGCCTGCGGCTA +
Preference number: 6 (lower is better)
Translates to: EDGTSLGCHRGR*MESESRGCLRL
Trigger: TAGCCGCAGGCATCCCCGACTTTCGCTCTCCATCCACCGGCCTCTATGACAACCTAGAGAAGTACCATCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479290.5
ENST00000635261.1
CDS CCA 72 bp GACAGGGAAGGGGATTGTGTTGCCAAAGTCACACGGTaGGTAAGCTGCAGAGCTGAGATTCACACCCAGGCA +
Preference number: 6 (lower is better)
Translates to: DREGDCVAKVTR*VSCRAEIHTQA
Trigger: TGCCTGGGTGTGAATCTCAGCTCTGCAGCTTACCCACCGTGTGACTTTGGCAACACAATCCCCTTCCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479290.5
ENST00000635261.1
CDS CAA 72 bp GTACTTAATGGCTACATAATATTTGTCTGCAGGGCCTaGGCGGGGCTTCTCATGCGTGCCCTCCCCCAACCC +
Preference number: 6 (lower is better)
Translates to: VLNGYIIFVCRA*AGLLMRALPQP
Trigger: GGGTTGGGGGAGGGCACGCATGAGAAGCCCCGCCAAGGCCCTGCAGACAAATATTATGTAGCCATTAAGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479290.5
ENST00000635261.1
CDS TCA 72 bp TCCTGTTTCGCCCCCTGCAAAACAAAGATCTCACCTTaGACTGCCCAGGATAGAGTTCCTTGGCGAGGGCGA +
Preference number: 6 (lower is better)
Translates to: SCFAPCKTKISP*TAQDRVPWRGR
Trigger: TCGCCCTCGCCAAGGAACTCTATCCTGGGCAGTTCAAGGTGAGATCTTTGTTTTGCAGGGGGCGAAACAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479290.5
ENST00000635261.1
CDS GCA 72 bp TCCAGGAGCCTGCTCTGGCACTGGTACCCAACCCACTaGTACATACTTTGGATGTCACTCCTGATGGAGTTG +
Preference number: 6 (lower is better)
Translates to: SRSLLWHWYPTH*YILWMSLLMEL
Trigger: CAACTCCATCAGGAGTGACATCCAAAGTATGTAGCAGTGGGTTGGGTACCAGTGCCAGAGCAGGCTCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462654.5
ENST00000479290.5
ENST00000635086.1
ENST00000635261.1
CDS GCA 72 bp TCCCGCCTCAACCTCCCGAGTAGCCTGGATGACAGGTaGCCAGCACCATGCCCGGCTAATTTTGTATTATTA +
Preference number: 6 (lower is better)
Translates to: SRLNLPSSLDDR*PAPCPANFVLL
Trigger: TAATAATACAAAATTAGCCGGGCATGGTGCTGGGCACCTGTCATCCAGGCTACTCGGGAGGTTGAGGCGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000479290.5
ENST00000496069.1
ENST00000634746.1
ENST00000635261.1
CDS CAA 72 bp CACTGCTACATACTTTGGATGTCACTCCTGATGGAGTaGAGGAGGTATCACCCACACCCCTGCCCTGAAATC +
Preference number: 6 (lower is better)
Translates to: HCYILWMSLLME*RRYHPHPCPEI
Trigger: GATTTCAGGGCAGGGGTGTGGGTGATACCTCCTCAACTCCATCAGGAGTGACATCCAAAGTATGTAGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462654.5
ENST00000479290.5
ENST00000635086.1
ENST00000635261.1
CDS CAA 72 bp GCTCTGGCACTGGTACCCAACCCACTGCTACATACTTaGGATGTCACTCCTGATGGAGTTGAGGAGGTATCA +
Preference number: 6 (lower is better)
Translates to: ALALVPNPLLHT*DVTPDGVEEVS
Trigger: TGATACCTCCTCAACTCCATCAGGAGTGACATCCAAAGTATGTAGCAGTGGGTTGGGTACCAGTGCCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462654.5
ENST00000479290.5
ENST00000635086.1
ENST00000635261.1