RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SIRT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000096717

Ensembl transcript IDs: ENST00000212015.11, ENST00000403579.1, ENST00000406900.5, ENST00000432464.5, ENST00000473922.1, ENST00000497639.5

Found 297 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTCTGGTTTCCTTGCTCTATCGAGTTCACAAGTAAACATTCATTTTaGCATGCTAAAGTTCCTAATGCTGGTGGAACAATTCCTGTACCT +
Preference number: 1 (lower is better)
Translates to: FWFPCSIEFTSKHSF*HAKVPNAGGTIPVP
Trigger: AGGTACAGGAATTGTTCCACCAGCATTAGGAACTTTAGCATGTCAAAATGAATGTTTACTTGTGAACTCGATAGAGCAAGGAAACCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
3UTR CCA 90 bp AGTTACATCATCATGTTCATCTCCATAATACTAGGGCTAGCAGTTTaGTATTTAACACCAAATCCTCCCAATGGGAGACATGTACTTTCT +
Preference number: 1 (lower is better)
Translates to: SYIIMFISIILGLAV*YLTPNPPNGRHVLS
Trigger: AGAAAGTACATGTCTCCCATTGGGAGGATTTGGTGTTAAATACCAAACTGCTAGCCCTAGTATTATGGAGATGAACATGATGATGTAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
3UTR-3UTR TCA 90 bp AAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACTGGTCTTGACCAACAGCTaGTTGAAGATACTTAGTACC +
Preference number: 2 (lower is better)
Translates to: KDNRVLSPHIVDFLLLTLVLTNS*LKILST
Trigger: GGTACTAAGTATCTTCAATCAGCTGTTGGTCAAGAC...CAGTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
3UTR-3UTR TCA 90 bp TTACTTTGGAACTGTATAATCAGGGGCCTGTTGCTCTCCTCATTAATGGAAAACGTCTTGACCAACAGCTaGTTGAAGATACTTAGTACC +
Preference number: 2 (lower is better)
Translates to: LLWNCIIRGLLLSSLMENVLTNS*LKILST
Trigger: GGTACTAAGTATCTTCAATCAGCTGTTGGTCAAGAC...GTTTTCCATTAATGAGGAGAGCAACAGGCCCCTGATTATACAGTTCCAAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
3UTR-3UTR TCA 90 bp ATGGCAAATATTTCAAAACTAAGGGGATCCAGGCAGGCACTAATGTTTCTAAAGCTCCCCACATATTGTTaGCTTCCTTCTACTCACACT +
Preference number: 2 (lower is better)
Translates to: MANISKLRGSRQALMFLKLPTYC*LPSTHT
Trigger: AGTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAG...CTTTAGAAACATTAGTGCCTGCCTGGATCCCCTTAGTTTTGAAATATTTGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
3UTR-3UTR GCA 90 bp ATGGCAAATATTTCAAAACTAAGGGGATCCAGGCAGGCACTAATGTTTCTAAAGGTAAAGACAACCGAGTaGTCTCCCCACATATTGTTG +
Preference number: 2 (lower is better)
Translates to: MANISKLRGSRQALMFLKVKTTE*SPHILL
Trigger: CAACAATATGTGGGGAGAGCACTCGGTTGTCTTTAC...CTTTAGAAACATTAGTGCCTGCCTGGATCCCCTTAGTTTTGAAATATTTGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
3UTR-3UTR CCA 90 bp AGTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACAGAAAATACCATTCTTTaGTCTAGATTAGCTGTTCCC +
Preference number: 2 (lower is better)
Translates to: SKDNRVLSPHIVDFLLLTENTIL*SRLAVP
Trigger: GGGAACAGCTAATCTAGACCAAAGAATGGTATTTTC...TGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
3UTR-3UTR TCA 90 bp ATGGCAAATATTTCAAAACTAAGGGGATCCAGGCAGGCACTAATGTTTCTAAAGGTCTTGACCAACAGCTaGTTGAAGATACTTAGTACC +
Preference number: 2 (lower is better)
Translates to: MANISKLRGSRQALMFLKVLTNS*LKILST
Trigger: GGTACTAAGTATCTTCAATCAGCTGTTGGTCAAGAC...CTTTAGAAACATTAGTGCCTGCCTGGATCCCCTTAGTTTTGAAATATTTGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
3UTR CAA 90 bp AAGTTACATCATCATGTTCATCTCCATAATACTAGGGCTAGCAGTTaGGTATTTAACACCAAATCCTCCCAATGGGAGACATGTACTTTC +
Preference number: 2 (lower is better)
Translates to: KLHHHVHLHNTRASS*VFNTKSSQWETCTF
Trigger: GAAAGTACATGTCTCCCATTGGGAGGATTTGGTGTTAAATACCAAACTGCTAGCCCTAGTATTATGGAGATGAACATGATGATGTAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
3UTR-3UTR GCA 90 bp CTCCCAATGGGAGACATGTACTTTCTGGCTGAATTACAATTAACATCTTATTACCCTTTCTGGTTTCCTTaGTCTATCGAGTTCACAAGT +
Preference number: 2 (lower is better)
Translates to: LPMGDMYFLAELQLTSYYPFWFP*SIEFTS
Trigger: ACTTGTGAACTCGATAGAGCAAGGAAACCAGAAAGG...GTAATAAGATGTTAATTGTAATTCAGCCAGAAAGTACATGTCTCCCATTGGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
3UTR-3UTR CCA 90 bp TTACTTTGGAACTGTATAATCAGGGGCCTGTTGCTCTCCTCATTAATGGAAAACAATATTACACCTTTCTaGTTTCCTTGCTCTATCGAG +
Preference number: 2 (lower is better)
Translates to: LLWNCIIRGLLLSSLMENNITPF*FPCSIE
Trigger: CTCGATAGAGCAAGGAAACCAGAAAGGTGTAATATT...GTTTTCCATTAATGAGGAGAGCAACAGGCCCCTGATTATACAGTTCCAAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
3UTR-3UTR TCA 90 bp CAGGCAGGCACTAATGTTTCTAAAGCAACTGAAACATTTCCAAAGCATTTATTTGTCTTGACCAACAGCTaGTTGAAGATACTTAGTACC +
Preference number: 2 (lower is better)
Translates to: QAGTNVSKATETFPKHLFVLTNS*LKILST
Trigger: GGTACTAAGTATCTTCAATCAGCTGTTGGTCAAGAC...AAATAAATGCTTTGGAAATGTTTCAGTTGCTTTAGAAACATTAGTGCCTGCCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
3UTR-3UTR GCA 90 bp CAGGCAGGCACTAATGTTTCTAAAGCAACTGAAACATTTCCAAAGCATTTATTTCCTTTCTGGTTTCCTTaGTCTATCGAGTTCACAAGT +
Preference number: 2 (lower is better)
Translates to: QAGTNVSKATETFPKHLFPFWFP*SIEFTS
Trigger: ACTTGTGAACTCGATAGAGCAAGGAAACCAGAAAGG...AAATAAATGCTTTGGAAATGTTTCAGTTGCTTTAGAAACATTAGTGCCTGCCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
3UTR-3UTR GCA 90 bp CTCCCAATGGGAGACATGTACTTTCTGGCTGAATTACAATTAACATCTTATTACAGCCAATATAGACATTaGTACATGTCCACAGGAAGT +
Preference number: 2 (lower is better)
Translates to: LPMGDMYFLAELQLTSYYSQYRH*YMSTGS
Trigger: ACTTCCTGTGGACATGTAGCAATGTCTATATTGGCT...GTAATAAGATGTTAATTGTAATTCAGCCAGAAAGTACATGTCTCCCATTGGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
3UTR-3UTR CCA 90 bp ATGGCAAATATTTCAAAACTAAGGGGATCCAGGCAGGCACTAATGTTTCTAAAGAATATTACACCTTTCTaGTTTCCTTGCTCTATCGAG +
Preference number: 2 (lower is better)
Translates to: MANISKLRGSRQALMFLKNITPF*FPCSIE
Trigger: CTCGATAGAGCAAGGAAACCAGAAAGGTGTAATATT...CTTTAGAAACATTAGTGCCTGCCTGGATCCCCTTAGTTTTGAAATATTTGCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
3UTR-3UTR CCA 90 bp ATGGCAAATATTTCAAAACTAAGGGGATCCAGGCAGGCACTAATGTTTCTAAAGGAAAATACCATTCTTTaGTCTAGATTAGCTGTTCCC +
Preference number: 2 (lower is better)
Translates to: MANISKLRGSRQALMFLKENTIL*SRLAVP
Trigger: GGGAACAGCTAATCTAGACCAAAGAATGGTATTTTC...CTTTAGAAACATTAGTGCCTGCCTGGATCCCCTTAGTTTTGAAATATTTGCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
3UTR-3UTR GCA 90 bp CAGGCAGGCACTAATGTTTCTAAAGCAACTGAAACATTTCCAAAGCATTTATTTAGCCAATATAGACATTaGTACATGTCCACAGGAAGT +
Preference number: 2 (lower is better)
Translates to: QAGTNVSKATETFPKHLFSQYRH*YMSTGS
Trigger: ACTTCCTGTGGACATGTAGCAATGTCTATATTGGCT...AAATAAATGCTTTGGAAATGTTTCAGTTGCTTTAGAAACATTAGTGCCTGCCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
3UTR-3UTR CCA 90 bp ACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATTTAAACAACAATATTACACCTTTCTaGTTTCCTTGCTCTATCGAG +
Preference number: 2 (lower is better)
Translates to: TCGKDQCKLYHSDRYLNNNITPF*FPCSIE
Trigger: CTCGATAGAGCAAGGAAACCAGAAAGGTGTAATATT...GTTGTTTAAATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
3UTR-3UTR GCA 90 bp CAGTTTAATACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATTCCTTCTACTCACACTaGATGTCATTTGAGATTTTA +
Preference number: 2 (lower is better)
Translates to: QFNTCGKDQCKLYHSDRYSFYSH*MSFEIL
Trigger: TAAAATCTCAAATGACATGCAGTGTGAGTAGAAGGA...ATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGTATTAAACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
3UTR-3UTR GCA 90 bp ACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATTTAAACAACTCCTTCTACTCACACTaGATGTCATTTGAGATTTTA +
Preference number: 2 (lower is better)
Translates to: TCGKDQCKLYHSDRYLNNSFYSH*MSFEIL
Trigger: TAAAATCTCAAATGACATGCAGTGTGAGTAGAAGGA...GTTGTTTAAATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
3UTR-3UTR GCA 90 bp ATTACAAGTTACATCATCATGTTCATCTCCATAATACTAGGGCTAGCAGTTTGGTCCTTCTACTCACACTaGATGTCATTTGAGATTTTA +
Preference number: 2 (lower is better)
Translates to: ITSYIIMFISIILGLAVWSFYSH*MSFEIL
Trigger: TAAAATCTCAAATGACATGCAGTGTGAGTAGAAGGA...CCAAACTGCTAGCCCTAGTATTATGGAGATGAACATGATGATGTAACTTGTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
3UTR-3UTR CAA 90 bp TTACTTTGGAACTGTATAATCAGGGGCCTGTTGCTCTCCTCATTAATGGAAAACTGCTCTCCCCACATATaGTTGACTTCCTTCTACTCA +
Preference number: 3 (lower is better)
Translates to: LLWNCIIRGLLLSSLMENCSPHI*LTSFYS
Trigger: TGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCA...GTTTTCCATTAATGAGGAGAGCAACAGGCCCCTGATTATACAGTTCCAAAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
3UTR-3UTR CAA 90 bp ATGGCAAATATTTCAAAACTAAGGGGATCCAGGCAGGCACTAATGTTTCTAAAGTCTCCCCACATATTGTaGACTTCCTTCTACTCACAC +
Preference number: 3 (lower is better)
Translates to: MANISKLRGSRQALMFLKSPHIL*TSFYSH
Trigger: GTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGA...CTTTAGAAACATTAGTGCCTGCCTGGATCCCCTTAGTTTTGAAATATTTGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
3UTR-3UTR CAA 90 bp CTCCCAATGGGAGACATGTACTTTCTGGCTGAATTACAATTAACATCTTATTACACCTTTCTGGTTTCCTaGCTCTATCGAGTTCACAAG +
Preference number: 3 (lower is better)
Translates to: LPMGDMYFLAELQLTSYYTFLVS*LYRVHK
Trigger: CTTGTGAACTCGATAGAGCAAGGAAACCAGAAAGGT...GTAATAAGATGTTAATTGTAATTCAGCCAGAAAGTACATGTCTCCCATTGGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
3UTR-3UTR CAA 90 bp ATTACAAGTTACATCATCATGTTCATCTCCATAATACTAGGGCTAGCAGTTTGGACCTTTCTGGTTTCCTaGCTCTATCGAGTTCACAAG +
Preference number: 3 (lower is better)
Translates to: ITSYIIMFISIILGLAVWTFLVS*LYRVHK
Trigger: CTTGTGAACTCGATAGAGCAAGGAAACCAGAAAGGT...CCAAACTGCTAGCCCTAGTATTATGGAGATGAACATGATGATGTAACTTGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
3UTR-3UTR CAA 90 bp ACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATTTAAACAACTGCTCTCCCCACATATaGTTGACTTCCTTCTACTCA +
Preference number: 3 (lower is better)
Translates to: TCGKDQCKLYHSDRYLNNCSPHI*LTSFYS
Trigger: TGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCA...GTTGTTTAAATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
3UTR CCA 72 bp ATCATGTTCATCTCCATAATACTAGGGCTAGCAGTTTaGTATTTAACACCAAATCCTCCCAATGGGAGACAT +
Preference number: 3 (lower is better)
Translates to: IMFISIILGLAV*YLTPNPPNGRH
Trigger: ATGTCTCCCATTGGGAGGATTTGGTGTTAAATACCAAACTGCTAGCCCTAGTATTATGGAGATGAACATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
3UTR TCA 72 bp CCTTGCTCTATCGAGTTCACAAGTAAACATTCATTTTaGCATGCTAAAGTTCCTAATGCTGGTGGAACAATT +
Preference number: 3 (lower is better)
Translates to: PCSIEFTSKHSF*HAKVPNAGGTI
Trigger: AATTGTTCCACCAGCATTAGGAACTTTAGCATGTCAAAATGAATGTTTACTTGTGAACTCGATAGAGCAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
3UTR GCA 72 bp ACATTTTGGCAGTTTAATACTTGTGGAAAAGATCAATaGAAGCTCTACCACAGTGATAGGTATTTAAACAAC +
Preference number: 3 (lower is better)
Translates to: TFWQFNTCGKDQ*KLYHSDRYLNN
Trigger: GTTGTTTAAATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGTATTAAACTGCCAAAATGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR GCA 90 bp GTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACCTCTTGCTCCCCGCCTaGCGCCGCCGCCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: VKTTECSPHILLTSFYSHLLLPA*RRRLCL
Trigger: GAGGCAGAGGCGGCGGCGGCAGGCGGGGAGCAAGAG...GTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000212015.11
CDS-3UTR GCA 90 bp CTCCCAATGGGAGACATGTACTTTCTGGCTGAATTACAATTAACATCTTATTACCTCCCTCGCCTCCTCTaGTCCCGCTCGACGCGCGGC +
Preference number: 4 (lower is better)
Translates to: LPMGDMYFLAELQLTSYYLPRLL*SRSTRG
Trigger: GCCGCGCGTCGAGCGGGAGCAGAGGAGGCGAGGGAG...GTAATAAGATGTTAATTGTAATTCAGCCAGAAAGTACATGTCTCCCATTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000212015.11
CDS-3UTR CCA 90 bp CTATCGAGTTCACAAGTAAACATTCATTTTGACATGCTAAAGTTCCTAATGCTGAACGGAGGGCCGGGGTaGGGAGGGGAACGCCGCGGA +
Preference number: 4 (lower is better)
Translates to: LSSSQVNIHFDMLKFLMLNGGPG*GGERRG
Trigger: TCCGCGGCGTTCCCCTCCCCACCCCGGCCCTCCGTT...CAGCATTAGGAACTTTAGCATGTCAAAATGAATGTTTACTTGTGAACTCGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432464.5
CDS-3UTR CCA 90 bp CAGTTTAATACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATGTTGTCGGCCAGCGGTaGCTCCCGAGATGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: QFNTCGKDQCKLYHSDRYVVGQR*LPRWAL
Trigger: CAGGGCCCATCTCGGGAGCCACCGCTGGCCGACAAC...ATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGTATTAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000212015.11
CDS-3UTR CCA 90 bp AAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACTGACCTATCCGTGGCCTTaGAGTCCAGTCACTAGAGCT +
Preference number: 4 (lower is better)
Translates to: KDNRVLSPHIVDFLLLTLTYPWP*SPVTRA
Trigger: AGCTCTAGTGACTGGACTCCAAGGCCACGGATAGGT...CAGTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000212015.11
ENST00000432464.5
CDS-3UTR CCA 90 bp AGTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACAAAGCGGTTCATCAGCTaGGCACCTAGGACATCGAGG +
Preference number: 4 (lower is better)
Translates to: SKDNRVLSPHIVDFLLLTKRFIS*APRTSR
Trigger: CCTCGATGTCCTAGGTGCCCAGCTGATGAACCGCTT...TGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp AAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACTGACAGACACCTATCCGTaGCCTTGGAGTCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: KDNRVLSPHIVDFLLLTLTDTYP*PWSPVT
Trigger: AGTGACTGGACTCCAAGGCCACGGATAGGTGTCTGT...CAGTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432464.5
CDS-3UTR TCA 90 bp GTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACGAGTCTTCTGAAACATaGAGAGGTGTGGGTGGCAAC +
Preference number: 4 (lower is better)
Translates to: VKTTECSPHILLTSFYSHESSET*RGVGGN
Trigger: GTTGCCACCCACACCTCTTCATGTTTCAGAAGACTC...GTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp AAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACTGGAGTCTTCTGAAACATaGAGAGGTGTGGGTGGCAAC +
Preference number: 4 (lower is better)
Translates to: KDNRVLSPHIVDFLLLTLESSET*RGVGGN
Trigger: GTTGCCACCCACACCTCTTCATGTTTCAGAAGACTC...CAGTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR GCA 90 bp CAGGCAGGCACTAATGTTTCTAAAGCAACTGAAACATTTCCAAAGCATTTATTTTCCCGAGATGGGCCCTaGAGGCCCGGCCCATTGTCT +
Preference number: 4 (lower is better)
Translates to: QAGTNVSKATETFPKHLFSRDGP*RPGPLS
Trigger: AGACAATGGGCCGGGCCTGCAGGGCCCATCTCGGGA...AAATAAATGCTTTGGAAATGTTTCAGTTGCTTTAGAAACATTAGTGCCTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000212015.11
CDS-3UTR CCA 90 bp AAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACTGATATGGACCTATCCGTaGCCTTGGAGTCCAGTCACT +
Preference number: 4 (lower is better)
Translates to: KDNRVLSPHIVDFLLLTLIWTYP*PWSPVT
Trigger: AGTGACTGGACTCCAAGGCCACGGATAGGTCCATAT...CAGTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000212015.11
CDS-3UTR TCA 90 bp AGTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACAGAGTCTTCTGAAACATaGAGAGGTGTGGGTGGCAAC +
Preference number: 4 (lower is better)
Translates to: SKDNRVLSPHIVDFLLLTESSET*RGVGGN
Trigger: GTTGCCACCCACACCTCTTCATGTTTCAGAAGACTC...TGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp AAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACTGGTCAGGTATTCCACATaGAACAGACACCTATCCGTG +
Preference number: 4 (lower is better)
Translates to: KDNRVLSPHIVDFLLLTLVRYST*NRHLSV
Trigger: CACGGATAGGTGTCTGTTTCATGTGGAATACCTGAC...CAGTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432464.5
CDS-3UTR CCA 90 bp TTACTTTGGAACTGTATAATCAGGGGCCTGTTGCTCTCCTCATTAATGGAAAACAAGCGGTTCATCAGCTaGGCACCTAGGACATCGAGG +
Preference number: 4 (lower is better)
Translates to: LLWNCIIRGLLLSSLMENKRFIS*APRTSR
Trigger: CCTCGATGTCCTAGGTGCCCAGCTGATGAACCGCTT...GTTTTCCATTAATGAGGAGAGCAACAGGCCCCTGATTATACAGTTCCAAAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp AGTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACATCCTCCAGCTCTCTCTaGAACATCAGGCTCATCTTC +
Preference number: 4 (lower is better)
Translates to: SKDNRVLSPHIVDFLLLTSSSSL*NIRLIF
Trigger: GAAGATGAGCCTGATGTTCCAGAGAGAGCTGGAGGA...TGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp GTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACCTCCCCACATATTGTTaGCTTCCTTCTACTCACACT +
Preference number: 4 (lower is better)
Translates to: VKTTECSPHILLTSFYSHLPTYC*LPSTHT
Trigger: AGTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAG...GTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp GTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACGTTGCTCATGAATGCTaGGTTGCTGGATTTTGTGTG +
Preference number: 4 (lower is better)
Translates to: VKTTECSPHILLTSFYSHVAHEC*VAGFCV
Trigger: CACACAAAATCCAGCAACTCAGCATTCATGAGCAAC...GTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403579.1
ENST00000406900.5
CDS-3UTR GCA 90 bp GTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACACTAATCTGCTCCTTTaGCACTCTATTAGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: VKTTECSPHILLTSFYSHTNLLL*HSIRPA
Trigger: TGCTGGCCTAATAGAGTGGCAAAGGAGCAGATTAGT...GTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR GCA 90 bp GTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACAGCCGCCTACTAATCTaGTCCTTTGCCACTCTATTA +
Preference number: 4 (lower is better)
Translates to: VKTTECSPHILLTSFYSHSRLLI*SFATLL
Trigger: TAATAGAGTGGCAAAGGAGCAGATTAGTAGGCGGCT...GTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR GCA 90 bp GTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACGTAAAGACAACCGAGTaGTCTCCCCACATATTGTTG +
Preference number: 4 (lower is better)
Translates to: VKTTECSPHILLTSFYSHVKTTE*SPHILL
Trigger: CAACAATATGTGGGGAGAGCACTCGGTTGTCTTTAC...GTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp AGTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACATCGCTTGAGGATCTaGAAGATCTGGGAAGTCTAC +
Preference number: 4 (lower is better)
Translates to: SKDNRVLSPHIVDFLLLTHRLRI*KIWEVY
Trigger: GTAGACTTCCCAGATCTTCCAGATCCTCAAGCGATG...TGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000212015.11
ENST00000432464.5
CDS-3UTR TCA 90 bp TTACTTTGGAACTGTATAATCAGGGGCCTGTTGCTCTCCTCATTAATGGAAAACACTAGAGCTTGCATGTaGGGCTCTATCCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: LLWNCIIRGLLLSSLMENTRACM*GSILLI
Trigger: GATGAGGAGGATAGAGCCTCACATGCAAGCTCTAGT...GTTTTCCATTAATGAGGAGAGCAACAGGCCCCTGATTATACAGTTCCAAAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000212015.11
ENST00000432464.5
CDS-3UTR TCA 90 bp GTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACATAAATACCATCCCTTaGCCTGAAGTCAGGTATTCC +
Preference number: 4 (lower is better)
Translates to: VKTTECSPHILLTSFYSHINTIP*PEVRYS
Trigger: GGAATACCTGACTTCAGGTCAAGGGATGGTATTTAT...GTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000212015.11
ENST00000432464.5
CDS-3UTR TCA 90 bp GTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACAAGGCTATGAATTTGTaGCAGAGAGATGGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: VKTTECSPHILLTSFYSHKAMNL*QRDGWN
Trigger: ATTCCAGCCATCTCTCTGTCACAAATTCATAGCCTT...GTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp AAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACTGAAGGCTATGAATTTGTaGCAGAGAGATGGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: KDNRVLSPHIVDFLLLTLKAMNL*QRDGWN
Trigger: ATTCCAGCCATCTCTCTGTCACAAATTCATAGCCTT...CAGTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp TTACTTTGGAACTGTATAATCAGGGGCCTGTTGCTCTCCTCATTAATGGAAAACGAGTCTTCTGAAACATaGAGAGGTGTGGGTGGCAAC +
Preference number: 4 (lower is better)
Translates to: LLWNCIIRGLLLSSLMENESSET*RGVGGN
Trigger: GTTGCCACCCACACCTCTTCATGTTTCAGAAGACTC...GTTTTCCATTAATGAGGAGAGCAACAGGCCCCTGATTATACAGTTCCAAAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp GTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACTCATTAATTGCCTCTTaGTCATCTCCATCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: VKTTECSPHILLTSFYSHSLIAS*SSPSVP
Trigger: TGGGACTGATGGAGATGATCAAGAGGCAATTAATGA...GTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR GCA 90 bp GTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACTTGTTTTCCTTCCACTaGACAGGCACATACTGGTAT +
Preference number: 4 (lower is better)
Translates to: VKTTECSPHILLTSFYSHLFSFH*TGTYWY
Trigger: ATACCAGTATGTGCCTGTGCAGTGGAAGGAAAACAA...GTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403579.1
ENST00000406900.5
CDS-3UTR GCA 90 bp CTCCCAATGGGAGACATGTACTTTCTGGCTGAATTACAATTAACATCTTATTACAGGTTATCTGGCTGCTaGGGAAAGAACAAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: LPMGDMYFLAELQLTSYYRLSGC*GKNKAA
Trigger: GGCGGCCTTGTTCTTTCCGCAGCAGCCAGATAACCT...GTAATAAGATGTTAATTGTAATTCAGCCAGAAAGTACATGTCTCCCATTGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432464.5
CDS-3UTR CCA 90 bp CAGTTTAATACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATAAGCGGTTCATCAGCTaGGCACCTAGGACATCGAGG +
Preference number: 4 (lower is better)
Translates to: QFNTCGKDQCKLYHSDRYKRFIS*APRTSR
Trigger: CCTCGATGTCCTAGGTGCCCAGCTGATGAACCGCTT...ATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGTATTAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp AAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACTGGGTTACAGCAAAGTTTaGCATATTCACCACCTAACC +
Preference number: 4 (lower is better)
Translates to: KDNRVLSPHIVDFLLLTLGYSKV*HIHHLT
Trigger: GGTTAGGTGGTGAATATGCCAAACTTTGCTGTAACC...CAGTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp AGTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACATCTAAACTTGGACTCTaGCATGTCCCACTATCACTG +
Preference number: 4 (lower is better)
Translates to: SKDNRVLSPHIVDFLLLTSKLGL*HVPLSL
Trigger: CAGTGATAGTGGGACATGCCAGAGTCCAAGTTTAGA...TGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp GTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACCACTTTCATCCTCCATaGGTTCTTCTAAACTTGGAC +
Preference number: 4 (lower is better)
Translates to: VKTTECSPHILLTSFYSHHFHPP*VLLNLD
Trigger: GTCCAAGTTTAGAAGAACCCATGGAGGATGAAAGTG...GTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp TTACTTTGGAACTGTATAATCAGGGGCCTGTTGCTCTCCTCATTAATGGAAAACTCCTCCAGCTCTCTCTaGAACATCAGGCTCATCTTC +
Preference number: 4 (lower is better)
Translates to: LLWNCIIRGLLLSSLMENSSSSL*NIRLIF
Trigger: GAAGATGAGCCTGATGTTCCAGAGAGAGCTGGAGGA...GTTTTCCATTAATGAGGAGAGCAACAGGCCCCTGATTATACAGTTCCAAAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp AAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACTGTGCACAGGCACATACTaGTATAGTATAGAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: KDNRVLSPHIVDFLLLTLCTGTY*YSIELL
Trigger: GAGCAACTCTATACTATACCAGTATGTGCCTGTGCA...CAGTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403579.1
ENST00000406900.5
CDS-3UTR TCA 90 bp ATTCATTTTGACATGCTAAAGTTCCTAATGCTGGTGGAACAATTCCTGTACCTGACTAGAGCTTGCATGTaGGGCTCTATCCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: IHFDMLKFLMLVEQFLYLTRACM*GSILLI
Trigger: GATGAGGAGGATAGAGCCTCACATGCAAGCTCTAGT...CAGGTACAGGAATTGTTCCACCAGCATTAGGAACTTTAGCATGTCAAAATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000212015.11
ENST00000432464.5
CDS-3UTR TCA 90 bp AGTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACAAAGGCTATGAATTTGTaGCAGAGAGATGGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: SKDNRVLSPHIVDFLLLTKAMNL*QRDGWN
Trigger: ATTCCAGCCATCTCTCTGTCACAAATTCATAGCCTT...TGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp GTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACCTTGGTCTAAAAGTGTaGCAATCACTGAAGAATCTG +
Preference number: 4 (lower is better)
Translates to: VKTTECSPHILLTSFYSHLGLKV*QSLKNL
Trigger: CAGATTCTTCAGTGATTGTCACACTTTTAGACCAAG...GTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp AGTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACATCATTAATTGCCTCTTaGTCATCTCCATCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: SKDNRVLSPHIVDFLLLTSLIAS*SSPSVP
Trigger: TGGGACTGATGGAGATGATCAAGAGGCAATTAATGA...TGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp AGTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACAGTCTTGACCAACAGCTaGTTGAAGATACTTAGTACC +
Preference number: 4 (lower is better)
Translates to: SKDNRVLSPHIVDFLLLTVLTNS*LKILST
Trigger: GGTACTAAGTATCTTCAATCAGCTGTTGGTCAAGAC...TGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR GCA 90 bp AAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACTGAGCCAATATAGACATTaGTACATGTCCACAGGAAGT +
Preference number: 4 (lower is better)
Translates to: KDNRVLSPHIVDFLLLTLSQYRH*YMSTGS
Trigger: ACTTCCTGTGGACATGTAGCAATGTCTATATTGGCT...CAGTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp ACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATTTAAACAACACCTATCCGTGGCCTTaGAGTCCAGTCACTAGAGCT +
Preference number: 4 (lower is better)
Translates to: TCGKDQCKLYHSDRYLNNTYPWP*SPVTRA
Trigger: AGCTCTAGTGACTGGACTCCAAGGCCACGGATAGGT...GTTGTTTAAATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000212015.11
ENST00000432464.5
CDS-3UTR CCA 90 bp AGTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACAGGTTACAGCAAAGTTTaGCATATTCACCACCTAACC +
Preference number: 4 (lower is better)
Translates to: SKDNRVLSPHIVDFLLLTGYSKV*HIHHLT
Trigger: GGTTAGGTGGTGAATATGCCAAACTTTGCTGTAACC...TGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp ATTCATTTTGACATGCTAAAGTTCCTAATGCTGGTGGAACAATTCCTGTACCTGTCCTCCAGCTCTCTCTaGAACATCAGGCTCATCTTC +
Preference number: 4 (lower is better)
Translates to: IHFDMLKFLMLVEQFLYLSSSSL*NIRLIF
Trigger: GAAGATGAGCCTGATGTTCCAGAGAGAGCTGGAGGA...CAGGTACAGGAATTGTTCCACCAGCATTAGGAACTTTAGCATGTCAAAATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp GTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACCTAGGGCTAGCAGTTTaGTATTTAACACCAAATCCT +
Preference number: 4 (lower is better)
Translates to: VKTTECSPHILLTSFYSHLGLAV*YLTPNP
Trigger: AGGATTTGGTGTTAAATACCAAACTGCTAGCCCTAG...GTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp AAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACTGCTAGGGCTAGCAGTTTaGTATTTAACACCAAATCCT +
Preference number: 4 (lower is better)
Translates to: KDNRVLSPHIVDFLLLTLLGLAV*YLTPNP
Trigger: AGGATTTGGTGTTAAATACCAAACTGCTAGCCCTAG...CAGTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
3UTR CAA 72 bp AAAGTAAAGACAACCGAGTGCTCTCCCCACATATTGTaGACTTCCTTCTACTCACACTGCATGTCATTTGAG +
Preference number: 4 (lower is better)
Translates to: KVKTTECSPHIL*TSFYSHCMSFE
Trigger: CTCAAATGACATGCAGTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp ATTCATTTTGACATGCTAAAGTTCCTAATGCTGGTGGAACAATTCCTGTACCTGTACCATCCCTTGACCTaGAGTCAGGTATTCCACATG +
Preference number: 4 (lower is better)
Translates to: IHFDMLKFLMLVEQFLYLYHPLT*SQVFHM
Trigger: CATGTGGAATACCTGACTTCAGGTCAAGGGATGGTA...CAGGTACAGGAATTGTTCCACCAGCATTAGGAACTTTAGCATGTCAAAATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000212015.11
ENST00000432464.5
CDS-3UTR TCA 90 bp AAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACTGTTTCCTTTGCAAACTTaGAGAATGGTCTTGGATCTT +
Preference number: 4 (lower is better)
Translates to: KDNRVLSPHIVDFLLLTLFPLQT*RMVLDL
Trigger: AAGATCCAAGACCATTCTTCAAGTTTGCAAAGGAAA...CAGTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000212015.11
ENST00000432464.5
CDS-3UTR TCA 90 bp AAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACTGACATCAAAATGCAGATaGGGCAAAGGTTCTCTATTA +
Preference number: 4 (lower is better)
Translates to: KDNRVLSPHIVDFLLLTLTSKCR*GKGSLL
Trigger: TAATAGAGAACCTTTGCCTCATCTGCATTTTGATGT...CAGTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp TTACTTTGGAACTGTATAATCAGGGGCCTGTTGCTCTCCTCATTAATGGAAAACGGCAAAAACAGATACTaGTTACCATCAAGCCGCCTA +
Preference number: 4 (lower is better)
Translates to: LLWNCIIRGLLLSSLMENGKNRY*LPSSRL
Trigger: TAGGCGGCTTGATGGTAATCAGTATCTGTTTTTGCC...GTTTTCCATTAATGAGGAGAGCAACAGGCCCCTGATTATACAGTTCCAAAGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR GCA 90 bp TTACTTTGGAACTGTATAATCAGGGGCCTGTTGCTCTCCTCATTAATGGAAAACAGCCGCCTACTAATCTaGTCCTTTGCCACTCTATTA +
Preference number: 4 (lower is better)
Translates to: LLWNCIIRGLLLSSLMENSRLLI*SFATLL
Trigger: TAATAGAGTGGCAAAGGAGCAGATTAGTAGGCGGCT...GTTTTCCATTAATGAGGAGAGCAACAGGCCCCTGATTATACAGTTCCAAAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR GCA 90 bp AGTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACATGTGGAAAAGATCAATaGAAGCTCTACCACAGTGAT +
Preference number: 4 (lower is better)
Translates to: SKDNRVLSPHIVDFLLLTCGKDQ*KLYHSD
Trigger: ATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACA...TGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR GCA 90 bp ACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATTTAAACAACAGAAGGTTATCTGGCTaGTGCGGAAAGAACAAGGCC +
Preference number: 4 (lower is better)
Translates to: TCGKDQCKLYHSDRYLNNRRLSG*CGKNKA
Trigger: GGCCTTGTTCTTTCCGCAGCAGCCAGATAACCTTCT...GTTGTTTAAATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432464.5
CDS-3UTR CCA 90 bp GTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACTTACTCTTAGCTGCTTaGTCTAAAAGTGTGACAATC +
Preference number: 4 (lower is better)
Translates to: VKTTECSPHILLTSFYSHLLLAA*SKSVTI
Trigger: GATTGTCACACTTTTAGACCAAGCAGCTAAGAGTAA...GTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp GTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACAGTTTGTACTTCCTGTaGTTTTTCTTCCATACAACC +
Preference number: 4 (lower is better)
Translates to: VKTTECSPHILLTSFYSHSLYFL*FFFHTT
Trigger: GGTTGTATGGAAGAAAAACCACAGGAAGTACAAACT...GTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp CTCCCAATGGGAGACATGTACTTTCTGGCTGAATTACAATTAACATCTTATTACTCCTCCAGCTCTCTCTaGAACATCAGGCTCATCTTC +
Preference number: 4 (lower is better)
Translates to: LPMGDMYFLAELQLTSYYSSSSL*NIRLIF
Trigger: GAAGATGAGCCTGATGTTCCAGAGAGAGCTGGAGGA...GTAATAAGATGTTAATTGTAATTCAGCCAGAAAGTACATGTCTCCCATTGGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp AAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACTGAATATTACACCTTTCTaGTTTCCTTGCTCTATCGAG +
Preference number: 4 (lower is better)
Translates to: KDNRVLSPHIVDFLLLTLNITPF*FPCSIE
Trigger: CTCGATAGAGCAAGGAAACCAGAAAGGTGTAATATT...CAGTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp TTACTTTGGAACTGTATAATCAGGGGCCTGTTGCTCTCCTCATTAATGGAAAACACCAAATCCTCCCAATaGGAGACATGTACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: LLWNCIIRGLLLSSLMENTKSSQ*ETCTFW
Trigger: CCAGAAAGTACATGTCTCCCATTGGGAGGATTTGGT...GTTTTCCATTAATGAGGAGAGCAACAGGCCCCTGATTATACAGTTCCAAAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp AGTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACTAGGGCTAGCAGTTTaGTATTTAACACCAAATCCT +
Preference number: 4 (lower is better)
Translates to: SKDNRVLSPHIVDFLLLTLGLAV*YLTPNP
Trigger: AGGATTTGGTGTTAAATACCAAACTGCTAGCCCTAG...TGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
3UTR CAA 72 bp CATCATGTTCATCTCCATAATACTAGGGCTAGCAGTTaGGTATTTAACACCAAATCCTCCCAATGGGAGACA +
Preference number: 4 (lower is better)
Translates to: HHVHLHNTRASS*VFNTKSSQWET
Trigger: TGTCTCCCATTGGGAGGATTTGGTGTTAAATACCAAACTGCTAGCCCTAGTATTATGGAGATGAACATGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp ACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATTTAAACAACTACCATCCCTTGACCTaGAGTCAGGTATTCCACATG +
Preference number: 4 (lower is better)
Translates to: TCGKDQCKLYHSDRYLNNYHPLT*SQVFHM
Trigger: CATGTGGAATACCTGACTTCAGGTCAAGGGATGGTA...GTTGTTTAAATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000212015.11
ENST00000432464.5
CDS-3UTR TCA 90 bp TTACTTTGGAACTGTATAATCAGGGGCCTGTTGCTCTCCTCATTAATGGAAAACAAGGCTATGAATTTGTaGCAGAGAGATGGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: LLWNCIIRGLLLSSLMENKAMNL*QRDGWN
Trigger: ATTCCAGCCATCTCTCTGTCACAAATTCATAGCCTT...GTTTTCCATTAATGAGGAGAGCAACAGGCCCCTGATTATACAGTTCCAAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp AGTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACTATTAATTAATATCTaGGGCACTTCATGGGGTATG +
Preference number: 4 (lower is better)
Translates to: SKDNRVLSPHIVDFLLLTLLINI*GTSWGM
Trigger: CATACCCCATGAAGTGCCTCAGATATTAATTAATAG...TGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp AGTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACAACATCAAAATGCAGATaGGGCAAAGGTTCTCTATTA +
Preference number: 4 (lower is better)
Translates to: SKDNRVLSPHIVDFLLLTTSKCR*GKGSLL
Trigger: TAATAGAGAACCTTTGCCTCATCTGCATTTTGATGT...TGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp TTACTTTGGAACTGTATAATCAGGGGCCTGTTGCTCTCCTCATTAATGGAAAACTCATTAATTGCCTCTTaGTCATCTCCATCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: LLWNCIIRGLLLSSLMENSLIAS*SSPSVP
Trigger: TGGGACTGATGGAGATGATCAAGAGGCAATTAATGA...GTTTTCCATTAATGAGGAGAGCAACAGGCCCCTGATTATACAGTTCCAAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR GCA 90 bp TTACTTTGGAACTGTATAATCAGGGGCCTGTTGCTCTCCTCATTAATGGAAAACACAAATCAGGCAAGATaGTGTTGCAAAGGAACCATG +
Preference number: 4 (lower is better)
Translates to: LLWNCIIRGLLLSSLMENTNQAR*CCKGTM
Trigger: CATGGTTCCTTTGCAACAGCATCTTGCCTGATTTGT...GTTTTCCATTAATGAGGAGAGCAACAGGCCCCTGATTATACAGTTCCAAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR GCA 90 bp TTACTTTGGAACTGTATAATCAGGGGCCTGTTGCTCTCCTCATTAATGGAAAACCCTTTCTGGTTTCCTTaGTCTATCGAGTTCACAAGT +
Preference number: 4 (lower is better)
Translates to: LLWNCIIRGLLLSSLMENPFWFP*SIEFTS
Trigger: ACTTGTGAACTCGATAGAGCAAGGAAACCAGAAAGG...GTTTTCCATTAATGAGGAGAGCAACAGGCCCCTGATTATACAGTTCCAAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp CTCCCAATGGGAGACATGTACTTTCTGGCTGAATTACAATTAACATCTTATTACCATCGCTTGAGGATCTaGAAGATCTGGGAAGTCTAC +
Preference number: 4 (lower is better)
Translates to: LPMGDMYFLAELQLTSYYHRLRI*KIWEVY
Trigger: GTAGACTTCCCAGATCTTCCAGATCCTCAAGCGATG...GTAATAAGATGTTAATTGTAATTCAGCCAGAAAGTACATGTCTCCCATTGGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000212015.11
ENST00000432464.5
CDS-3UTR CCA 90 bp GTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACTGCAAACTTGAAGAATaGTCTTGGATCTTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: VKTTECSPHILLTSFYSHCKLEE*SWIFSE
Trigger: TTCAGAAAAGATCCAAGACCATTCTTCAAGTTTGCA...GTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000212015.11
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp AGTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACTTTGTCATACTTCATaGCTCTATGAAACTGTTCTG +
Preference number: 4 (lower is better)
Translates to: SKDNRVLSPHIVDFLLLTLCHTS*LYETVL
Trigger: CAGAACAGTTTCATAGAGCCATGAAGTATGACAAAG...TGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp TTACTTTGGAACTGTATAATCAGGGGCCTGTTGCTCTCCTCATTAATGGAAAACAAACATGAAGAGGTGTaGGTGGCAACTCTGACAAAT +
Preference number: 4 (lower is better)
Translates to: LLWNCIIRGLLLSSLMENKHEEV*VATLTN
Trigger: ATTTGTCAGAGTTGCCACCCACACCTCTTCATGTTT...GTTTTCCATTAATGAGGAGAGCAACAGGCCCCTGATTATACAGTTCCAAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp ATTCATTTTGACATGCTAAAGTTCCTAATGCTGGTGGAACAATTCCTGTACCTGTCTAAACTTGGACTCTaGCATGTCCCACTATCACTG +
Preference number: 4 (lower is better)
Translates to: IHFDMLKFLMLVEQFLYLSKLGL*HVPLSL
Trigger: CAGTGATAGTGGGACATGCCAGAGTCCAAGTTTAGA...CAGGTACAGGAATTGTTCCACCAGCATTAGGAACTTTAGCATGTCAAAATGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp CAGTTTAATACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATATATCAAACATCGCTTaGGGATCTGGAAGATCTGGG +
Preference number: 4 (lower is better)
Translates to: QFNTCGKDQCKLYHSDRYISNIA*GSGRSG
Trigger: CCCAGATCTTCCAGATCCTCAAGCGATGTTTGATAT...ATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGTATTAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000212015.11
ENST00000432464.5
CDS-3UTR TCA 90 bp ATTCATTTTGACATGCTAAAGTTCCTAATGCTGGTGGAACAATTCCTGTACCTGTGTGGGTGGCAACTCTaGCAAATAAGCCAATTCTTT +
Preference number: 4 (lower is better)
Translates to: IHFDMLKFLMLVEQFLYLCGWQL*QISQFF
Trigger: AAAGAATTGGCTTATTTGTCAGAGTTGCCACCCACA...CAGGTACAGGAATTGTTCCACCAGCATTAGGAACTTTAGCATGTCAAAATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp TTACTTTGGAACTGTATAATCAGGGGCCTGTTGCTCTCCTCATTAATGGAAAACCTTGGTCTAAAAGTGTaGCAATCACTGAAGAATCTG +
Preference number: 4 (lower is better)
Translates to: LLWNCIIRGLLLSSLMENLGLKV*QSLKNL
Trigger: CAGATTCTTCAGTGATTGTCACACTTTTAGACCAAG...GTTTTCCATTAATGAGGAGAGCAACAGGCCCCTGATTATACAGTTCCAAAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp CAGTTTAATACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATGGCAAAAACAGATACTaGTTACCATCAAGCCGCCTA +
Preference number: 4 (lower is better)
Translates to: QFNTCGKDQCKLYHSDRYGKNRY*LPSSRL
Trigger: TAGGCGGCTTGATGGTAATCAGTATCTGTTTTTGCC...ATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGTATTAAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp CTCCCAATGGGAGACATGTACTTTCTGGCTGAATTACAATTAACATCTTATTACGGCAAAAACAGATACTaGTTACCATCAAGCCGCCTA +
Preference number: 4 (lower is better)
Translates to: LPMGDMYFLAELQLTSYYGKNRY*LPSSRL
Trigger: TAGGCGGCTTGATGGTAATCAGTATCTGTTTTTGCC...GTAATAAGATGTTAATTGTAATTCAGCCAGAAAGTACATGTCTCCCATTGGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp ATTCATTTTGACATGCTAAAGTTCCTAATGCTGGTGGAACAATTCCTGTACCTGGTCTTGACCAACAGCTaGTTGAAGATACTTAGTACC +
Preference number: 4 (lower is better)
Translates to: IHFDMLKFLMLVEQFLYLVLTNS*LKILST
Trigger: GGTACTAAGTATCTTCAATCAGCTGTTGGTCAAGAC...CAGGTACAGGAATTGTTCCACCAGCATTAGGAACTTTAGCATGTCAAAATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp CTCCCAATGGGAGACATGTACTTTCTGGCTGAATTACAATTAACATCTTATTACCTCCCCACATATTGTTaGCTTCCTTCTACTCACACT +
Preference number: 4 (lower is better)
Translates to: LPMGDMYFLAELQLTSYYLPTYC*LPSTHT
Trigger: AGTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAG...GTAATAAGATGTTAATTGTAATTCAGCCAGAAAGTACATGTCTCCCATTGGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp ACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATTTAAACAACCTCCCCACATATTGTTaGCTTCCTTCTACTCACACT +
Preference number: 4 (lower is better)
Translates to: TCGKDQCKLYHSDRYLNNLPTYC*LPSTHT
Trigger: AGTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAG...GTTGTTTAAATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp CTCCCAATGGGAGACATGTACTTTCTGGCTGAATTACAATTAACATCTTATTACGTTGCTCATGAATGCTaGGTTGCTGGATTTTGTGTG +
Preference number: 4 (lower is better)
Translates to: LPMGDMYFLAELQLTSYYVAHEC*VAGFCV
Trigger: CACACAAAATCCAGCAACTCAGCATTCATGAGCAAC...GTAATAAGATGTTAATTGTAATTCAGCCAGAAAGTACATGTCTCCCATTGGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403579.1
ENST00000406900.5
CDS-3UTR GCA 90 bp ATTCATTTTGACATGCTAAAGTTCCTAATGCTGGTGGAACAATTCCTGTACCTGACAAATCAGGCAAGATaGTGTTGCAAAGGAACCATG +
Preference number: 4 (lower is better)
Translates to: IHFDMLKFLMLVEQFLYLTNQAR*CCKGTM
Trigger: CATGGTTCCTTTGCAACAGCATCTTGCCTGATTTGT...CAGGTACAGGAATTGTTCCACCAGCATTAGGAACTTTAGCATGTCAAAATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR GCA 90 bp ATGGCAAATATTTCAAAACTAAGGGGATCCAGGCAGGCACTAATGTTTCTAAAGACAAATCAGGCAAGATaGTGTTGCAAAGGAACCATG +
Preference number: 4 (lower is better)
Translates to: MANISKLRGSRQALMFLKTNQAR*CCKGTM
Trigger: CATGGTTCCTTTGCAACAGCATCTTGCCTGATTTGT...CTTTAGAAACATTAGTGCCTGCCTGGATCCCCTTAGTTTTGAAATATTTGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR GCA 90 bp ATTACAAGTTACATCATCATGTTCATCTCCATAATACTAGGGCTAGCAGTTTGGACTAATCTGCTCCTTTaGCACTCTATTAGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: ITSYIIMFISIILGLAVWTNLLL*HSIRPA
Trigger: TGCTGGCCTAATAGAGTGGCAAAGGAGCAGATTAGT...CCAAACTGCTAGCCCTAGTATTATGGAGATGAACATGATGATGTAACTTGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR GCA 90 bp ACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATTTAAACAACACTAATCTGCTCCTTTaGCACTCTATTAGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: TCGKDQCKLYHSDRYLNNTNLLL*HSIRPA
Trigger: TGCTGGCCTAATAGAGTGGCAAAGGAGCAGATTAGT...GTTGTTTAAATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR GCA 90 bp CTCCCAATGGGAGACATGTACTTTCTGGCTGAATTACAATTAACATCTTATTACAGCCGCCTACTAATCTaGTCCTTTGCCACTCTATTA +
Preference number: 4 (lower is better)
Translates to: LPMGDMYFLAELQLTSYYSRLLI*SFATLL
Trigger: TAATAGAGTGGCAAAGGAGCAGATTAGTAGGCGGCT...GTAATAAGATGTTAATTGTAATTCAGCCAGAAAGTACATGTCTCCCATTGGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR GCA 90 bp CAGTTTAATACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATAGCCGCCTACTAATCTaGTCCTTTGCCACTCTATTA +
Preference number: 4 (lower is better)
Translates to: QFNTCGKDQCKLYHSDRYSRLLI*SFATLL
Trigger: TAATAGAGTGGCAAAGGAGCAGATTAGTAGGCGGCT...ATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGTATTAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR GCA 90 bp AGTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACATATAGCTTCATTAATTaGCTCTTGATCATCTCCATC +
Preference number: 4 (lower is better)
Translates to: SKDNRVLSPHIVDFLLLTYSFIN*LLIISI
Trigger: GATGGAGATGATCAAGAGGCAATTAATGAAGCTATA...TGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR GCA 90 bp CAGTTTAATACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATGTAAAGACAACCGAGTaGTCTCCCCACATATTGTTG +
Preference number: 4 (lower is better)
Translates to: QFNTCGKDQCKLYHSDRYVKTTE*SPHILL
Trigger: CAACAATATGTGGGGAGAGCACTCGGTTGTCTTTAC...ATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGTATTAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR GCA 90 bp TTACTTTGGAACTGTATAATCAGGGGCCTGTTGCTCTCCTCATTAATGGAAAACAGCCAATATAGACATTaGTACATGTCCACAGGAAGT +
Preference number: 4 (lower is better)
Translates to: LLWNCIIRGLLLSSLMENSQYRH*YMSTGS
Trigger: ACTTCCTGTGGACATGTAGCAATGTCTATATTGGCT...GTTTTCCATTAATGAGGAGAGCAACAGGCCCCTGATTATACAGTTCCAAAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR GCA 90 bp TTACTTTGGAACTGTATAATCAGGGGCCTGTTGCTCTCCTCATTAATGGAAAACTGTGGAAAAGATCAATaGAAGCTCTACCACAGTGAT +
Preference number: 4 (lower is better)
Translates to: LLWNCIIRGLLLSSLMENCGKDQ*KLYHSD
Trigger: ATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACA...GTTTTCCATTAATGAGGAGAGCAACAGGCCCCTGATTATACAGTTCCAAAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp ACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATTTAAACAACCTGAACAAAAGTATATaGACCTATCCGTGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: TCGKDQCKLYHSDRYLNNLNKSI*TYPWPW
Trigger: CCAAGGCCACGGATAGGTCCATATACTTTTGTTCAG...GTTGTTTAAATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000212015.11
CDS-3UTR CCA 90 bp ATTACAAGTTACATCATCATGTTCATCTCCATAATACTAGGGCTAGCAGTTTGGATCATCCAACTCAGGTaGAGGTATTGTTTCCGGCAA +
Preference number: 4 (lower is better)
Translates to: ITSYIIMFISIILGLAVWIIQLR*RYCFRQ
Trigger: TTGCCGGAAACAATACCTCCACCTGAGTTGGATGAT...CCAAACTGCTAGCCCTAGTATTATGGAGATGAACATGATGATGTAACTTGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000212015.11
CDS-3UTR CCA 90 bp AGTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACATGCAAACTTGAAGAATaGTCTTGGATCTTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: SKDNRVLSPHIVDFLLLTCKLEE*SWIFSE
Trigger: TTCAGAAAAGATCCAAGACCATTCTTCAAGTTTGCA...TGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000212015.11
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp ATGGCAAATATTTCAAAACTAAGGGGATCCAGGCAGGCACTAATGTTTCTAAAGGGTTACAGCAAAGTTTaGCATATTCACCACCTAACC +
Preference number: 4 (lower is better)
Translates to: MANISKLRGSRQALMFLKGYSKV*HIHHLT
Trigger: GGTTAGGTGGTGAATATGCCAAACTTTGCTGTAACC...CTTTAGAAACATTAGTGCCTGCCTGGATCCCCTTAGTTTTGAAATATTTGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp ATGGCAAATATTTCAAAACTAAGGGGATCCAGGCAGGCACTAATGTTTCTAAAGAAACATGAAGAGGTGTaGGTGGCAACTCTGACAAAT +
Preference number: 4 (lower is better)
Translates to: MANISKLRGSRQALMFLKKHEEV*VATLTN
Trigger: ATTTGTCAGAGTTGCCACCCACACCTCTTCATGTTT...CTTTAGAAACATTAGTGCCTGCCTGGATCCCCTTAGTTTTGAAATATTTGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp CTCCCAATGGGAGACATGTACTTTCTGGCTGAATTACAATTAACATCTTATTACTCTAAACTTGGACTCTaGCATGTCCCACTATCACTG +
Preference number: 4 (lower is better)
Translates to: LPMGDMYFLAELQLTSYYSKLGL*HVPLSL
Trigger: CAGTGATAGTGGGACATGCCAGAGTCCAAGTTTAGA...GTAATAAGATGTTAATTGTAATTCAGCCAGAAAGTACATGTCTCCCATTGGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp ATGGCAAATATTTCAAAACTAAGGGGATCCAGGCAGGCACTAATGTTTCTAAAGCACTTTCATCCTCCATaGGTTCTTCTAAACTTGGAC +
Preference number: 4 (lower is better)
Translates to: MANISKLRGSRQALMFLKHFHPP*VLLNLD
Trigger: GTCCAAGTTTAGAAGAACCCATGGAGGATGAAAGTG...CTTTAGAAACATTAGTGCCTGCCTGGATCCCCTTAGTTTTGAAATATTTGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp ATTACAAGTTACATCATCATGTTCATCTCCATAATACTAGGGCTAGCAGTTTGGACCAAATCCTCCCAATaGGAGACATGTACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: ITSYIIMFISIILGLAVWTKSSQ*ETCTFW
Trigger: CCAGAAAGTACATGTCTCCCATTGGGAGGATTTGGT...CCAAACTGCTAGCCCTAGTATTATGGAGATGAACATGATGATGTAACTTGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp ACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATTTAAACAACACCAAATCCTCCCAATaGGAGACATGTACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: TCGKDQCKLYHSDRYLNNTKSSQ*ETCTFW
Trigger: CCAGAAAGTACATGTCTCCCATTGGGAGGATTTGGT...GTTGTTTAAATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp ATTACAAGTTACATCATCATGTTCATCTCCATAATACTAGGGCTAGCAGTTTGGGAACAGAAGGTTATCTaGCTGCTGCGGAAAGAACAA +
Preference number: 4 (lower is better)
Translates to: ITSYIIMFISIILGLAVWEQKVI*LLRKEQ
Trigger: TTGTTCTTTCCGCAGCAGCCAGATAACCTTCTGTTC...CCAAACTGCTAGCCCTAGTATTATGGAGATGAACATGATGATGTAACTTGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432464.5
3UTR CAA 72 bp TTAAAAGTAAAGACAACCGAGTGCTCTCCCCACATATaGTTGACTTCCTTCTACTCACACTGCATGTCATTT +
Preference number: 4 (lower is better)
Translates to: LKVKTTECSPHI*LTSFYSHCMSF
Trigger: AAATGACATGCAGTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTACTTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp ATTCATTTTGACATGCTAAAGTTCCTAATGCTGGTGGAACAATTCCTGTACCTGTATCTGACAAGGCTATaGATTTGTGACAGAGAGATG +
Preference number: 4 (lower is better)
Translates to: IHFDMLKFLMLVEQFLYLYLTRL*ICDREM
Trigger: CATCTCTCTGTCACAAATTCATAGCCTTGTCAGATA...CAGGTACAGGAATTGTTCCACCAGCATTAGGAACTTTAGCATGTCAAAATGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp ATGGCAAATATTTCAAAACTAAGGGGATCCAGGCAGGCACTAATGTTTCTAAAGCATCGAGGAACTACCTaGTTAAAAATATCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: MANISKLRGSRQALMFLKHRGTT*LKISPR
Trigger: ACGAGGAGATATTTTTAATCAGGTAGTTCCTCGATG...CTTTAGAAACATTAGTGCCTGCCTGGATCCCCTTAGTTTTGAAATATTTGCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp CAGTTTAATACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATTGTGGGTGGCAACTCTaGCAAATAAGCCAATTCTTT +
Preference number: 4 (lower is better)
Translates to: QFNTCGKDQCKLYHSDRYCGWQL*QISQFF
Trigger: AAAGAATTGGCTTATTTGTCAGAGTTGCCACCCACA...ATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGTATTAAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp CAGGCAGGCACTAATGTTTCTAAAGCAACTGAAACATTTCCAAAGCATTTATTTGGCAAAAACAGATACTaGTTACCATCAAGCCGCCTA +
Preference number: 4 (lower is better)
Translates to: QAGTNVSKATETFPKHLFGKNRY*LPSSRL
Trigger: TAGGCGGCTTGATGGTAATCAGTATCTGTTTTTGCC...AAATAAATGCTTTGGAAATGTTTCAGTTGCTTTAGAAACATTAGTGCCTGCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp CTCCCAATGGGAGACATGTACTTTCTGGCTGAATTACAATTAACATCTTATTACTCATTAATTGCCTCTTaGTCATCTCCATCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: LPMGDMYFLAELQLTSYYSLIAS*SSPSVP
Trigger: TGGGACTGATGGAGATGATCAAGAGGCAATTAATGA...GTAATAAGATGTTAATTGTAATTCAGCCAGAAAGTACATGTCTCCCATTGGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp ACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATTTAAACAACGTCTTGACCAACAGCTaGTTGAAGATACTTAGTACC +
Preference number: 4 (lower is better)
Translates to: TCGKDQCKLYHSDRYLNNVLTNS*LKILST
Trigger: GGTACTAAGTATCTTCAATCAGCTGTTGGTCAAGAC...GTTGTTTAAATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR GCA 90 bp CAGTTTAATACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATACAAATCAGGCAAGATaGTGTTGCAAAGGAACCATG +
Preference number: 4 (lower is better)
Translates to: QFNTCGKDQCKLYHSDRYTNQAR*CCKGTM
Trigger: CATGGTTCCTTTGCAACAGCATCTTGCCTGATTTGT...ATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGTATTAAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR GCA 90 bp CAGTTTAATACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATCCTTTCTGGTTTCCTTaGTCTATCGAGTTCACAAGT +
Preference number: 4 (lower is better)
Translates to: QFNTCGKDQCKLYHSDRYPFWFP*SIEFTS
Trigger: ACTTGTGAACTCGATAGAGCAAGGAAACCAGAAAGG...ATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGTATTAAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR GCA 90 bp CTATCGAGTTCACAAGTAAACATTCATTTTGACATGCTAAAGTTCCTAATGCTGGTAAAGACAACCGAGTaGTCTCCCCACATATTGTTG +
Preference number: 4 (lower is better)
Translates to: LSSSQVNIHFDMLKFLMLVKTTE*SPHILL
Trigger: CAACAATATGTGGGGAGAGCACTCGGTTGTCTTTAC...CAGCATTAGGAACTTTAGCATGTCAAAATGAATGTTTACTTGTGAACTCGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR GCA 90 bp CAGGCAGGCACTAATGTTTCTAAAGCAACTGAAACATTTCCAAAGCATTTATTTGTAAAGACAACCGAGTaGTCTCCCCACATATTGTTG +
Preference number: 4 (lower is better)
Translates to: QAGTNVSKATETFPKHLFVKTTE*SPHILL
Trigger: CAACAATATGTGGGGAGAGCACTCGGTTGTCTTTAC...AAATAAATGCTTTGGAAATGTTTCAGTTGCTTTAGAAACATTAGTGCCTGCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR GCA 90 bp ATGGCAAATATTTCAAAACTAAGGGGATCCAGGCAGGCACTAATGTTTCTAAAGAGCCAATATAGACATTaGTACATGTCCACAGGAAGT +
Preference number: 4 (lower is better)
Translates to: MANISKLRGSRQALMFLKSQYRH*YMSTGS
Trigger: ACTTCCTGTGGACATGTAGCAATGTCTATATTGGCT...CTTTAGAAACATTAGTGCCTGCCTGGATCCCCTTAGTTTTGAAATATTTGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp TTACTTTGGAACTGTATAATCAGGGGCCTGTTGCTCTCCTCATTAATGGAAAACCTTTGTCATACTTCATaGCTCTATGAAACTGTTCTG +
Preference number: 4 (lower is better)
Translates to: LLWNCIIRGLLLSSLMENLCHTS*LYETVL
Trigger: CAGAACAGTTTCATAGAGCCATGAAGTATGACAAAG...GTTTTCCATTAATGAGGAGAGCAACAGGCCCCTGATTATACAGTTCCAAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp ATTACAAGTTACATCATCATGTTCATCTCCATAATACTAGGGCTAGCAGTTTGGAAACATGAAGAGGTGTaGGTGGCAACTCTGACAAAT +
Preference number: 4 (lower is better)
Translates to: ITSYIIMFISIILGLAVWKHEEV*VATLTN
Trigger: ATTTGTCAGAGTTGCCACCCACACCTCTTCATGTTT...CCAAACTGCTAGCCCTAGTATTATGGAGATGAACATGATGATGTAACTTGTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp TTACTTTGGAACTGTATAATCAGGGGCCTGTTGCTCTCCTCATTAATGGAAAACTTACTCTTAGCTGCTTaGTCTAAAAGTGTGACAATC +
Preference number: 4 (lower is better)
Translates to: LLWNCIIRGLLLSSLMENLLLAA*SKSVTI
Trigger: GATTGTCACACTTTTAGACCAAGCAGCTAAGAGTAA...GTTTTCCATTAATGAGGAGAGCAACAGGCCCCTGATTATACAGTTCCAAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp CAGTTTAATACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATCACTTTCATCCTCCATaGGTTCTTCTAAACTTGGAC +
Preference number: 4 (lower is better)
Translates to: QFNTCGKDQCKLYHSDRYHFHPP*VLLNLD
Trigger: GTCCAAGTTTAGAAGAACCCATGGAGGATGAAAGTG...ATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGTATTAAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp ATTACAAGTTACATCATCATGTTCATCTCCATAATACTAGGGCTAGCAGTTTGGCACTTTCATCCTCCATaGGTTCTTCTAAACTTGGAC +
Preference number: 4 (lower is better)
Translates to: ITSYIIMFISIILGLAVWHFHPP*VLLNLD
Trigger: GTCCAAGTTTAGAAGAACCCATGGAGGATGAAAGTG...CCAAACTGCTAGCCCTAGTATTATGGAGATGAACATGATGATGTAACTTGTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp TTACTTTGGAACTGTATAATCAGGGGCCTGTTGCTCTCCTCATTAATGGAAAACGAAAATACCATTCTTTaGTCTAGATTAGCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: LLWNCIIRGLLLSSLMENENTIL*SRLAVP
Trigger: GGGAACAGCTAATCTAGACCAAAGAATGGTATTTTC...GTTTTCCATTAATGAGGAGAGCAACAGGCCCCTGATTATACAGTTCCAAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp ACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATTTAAACAACTGCACAGGCACATACTaGTATAGTATAGAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: TCGKDQCKLYHSDRYLNNCTGTY*YSIELL
Trigger: GAGCAACTCTATACTATACCAGTATGTGCCTGTGCA...GTTGTTTAAATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403579.1
ENST00000406900.5
CDS-3UTR TCA 90 bp CTCCCAATGGGAGACATGTACTTTCTGGCTGAATTACAATTAACATCTTATTACCATCGAGGAACTACCTaGTTAAAAATATCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: LPMGDMYFLAELQLTSYYHRGTT*LKISPR
Trigger: ACGAGGAGATATTTTTAATCAGGTAGTTCCTCGATG...GTAATAAGATGTTAATTGTAATTCAGCCAGAAAGTACATGTCTCCCATTGGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp CAGTTTAATACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATCATCGAGGAACTACCTaGTTAAAAATATCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: QFNTCGKDQCKLYHSDRYHRGTT*LKISPR
Trigger: ACGAGGAGATATTTTTAATCAGGTAGTTCCTCGATG...ATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGTATTAAACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp ATTCATTTTGACATGCTAAAGTTCCTAATGCTGGTGGAACAATTCCTGTACCTGCTATTAATTAATATCTaGGGCACTTCATGGGGTATG +
Preference number: 4 (lower is better)
Translates to: IHFDMLKFLMLVEQFLYLLLINI*GTSWGM
Trigger: CATACCCCATGAAGTGCCTCAGATATTAATTAATAG...CAGGTACAGGAATTGTTCCACCAGCATTAGGAACTTTAGCATGTCAAAATGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp ATGGCAAATATTTCAAAACTAAGGGGATCCAGGCAGGCACTAATGTTTCTAAAGACATCAAAATGCAGATaGGGCAAAGGTTCTCTATTA +
Preference number: 4 (lower is better)
Translates to: MANISKLRGSRQALMFLKTSKCR*GKGSLL
Trigger: TAATAGAGAACCTTTGCCTCATCTGCATTTTGATGT...CTTTAGAAACATTAGTGCCTGCCTGGATCCCCTTAGTTTTGAAATATTTGCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp CTATCGAGTTCACAAGTAAACATTCATTTTGACATGCTAAAGTTCCTAATGCTGTGTGGGTGGCAACTCTaGCAAATAAGCCAATTCTTT +
Preference number: 4 (lower is better)
Translates to: LSSSQVNIHFDMLKFLMLCGWQL*QISQFF
Trigger: AAAGAATTGGCTTATTTGTCAGAGTTGCCACCCACA...CAGCATTAGGAACTTTAGCATGTCAAAATGAATGTTTACTTGTGAACTCGATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp CAGGCAGGCACTAATGTTTCTAAAGCAACTGAAACATTTCCAAAGCATTTATTTTGTGGGTGGCAACTCTaGCAAATAAGCCAATTCTTT +
Preference number: 4 (lower is better)
Translates to: QAGTNVSKATETFPKHLFCGWQL*QISQFF
Trigger: AAAGAATTGGCTTATTTGTCAGAGTTGCCACCCACA...AAATAAATGCTTTGGAAATGTTTCAGTTGCTTTAGAAACATTAGTGCCTGCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp CTCCCAATGGGAGACATGTACTTTCTGGCTGAATTACAATTAACATCTTATTACCTTGGTCTAAAAGTGTaGCAATCACTGAAGAATCTG +
Preference number: 4 (lower is better)
Translates to: LPMGDMYFLAELQLTSYYLGLKV*QSLKNL
Trigger: CAGATTCTTCAGTGATTGTCACACTTTTAGACCAAG...GTAATAAGATGTTAATTGTAATTCAGCCAGAAAGTACATGTCTCCCATTGGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp ACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATTTAAACAACCTTGGTCTAAAAGTGTaGCAATCACTGAAGAATCTG +
Preference number: 4 (lower is better)
Translates to: TCGKDQCKLYHSDRYLNNLGLKV*QSLKNL
Trigger: CAGATTCTTCAGTGATTGTCACACTTTTAGACCAAG...GTTGTTTAAATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR GCA 90 bp CAGTTTAATACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATTGTTCTGGGTATAGTTaGGAAGTAGTTTTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: QFNTCGKDQCKLYHSDRYCSGYS*EVVFLP
Trigger: AGGAAGGAAAACTACTTCGCAACTATACCCAGAACA...ATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGTATTAAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR GCA 90 bp TTACTTTGGAACTGTATAATCAGGGGCCTGTTGCTCTCCTCATTAATGGAAAACTCCTTCTACTCACACTaGATGTCATTTGAGATTTTA +
Preference number: 4 (lower is better)
Translates to: LLWNCIIRGLLLSSLMENSFYSH*MSFEIL
Trigger: TAAAATCTCAAATGACATGCAGTGTGAGTAGAAGGA...GTTTTCCATTAATGAGGAGAGCAACAGGCCCCTGATTATACAGTTCCAAAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR GCA 90 bp CTCCCAATGGGAGACATGTACTTTCTGGCTGAATTACAATTAACATCTTATTACTGTGGAAAAGATCAATaGAAGCTCTACCACAGTGAT +
Preference number: 4 (lower is better)
Translates to: LPMGDMYFLAELQLTSYYCGKDQ*KLYHSD
Trigger: ATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACA...GTAATAAGATGTTAATTGTAATTCAGCCAGAAAGTACATGTCTCCCATTGGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR GCA 90 bp ATTACAAGTTACATCATCATGTTCATCTCCATAATACTAGGGCTAGCAGTTTGGTGTGGAAAAGATCAATaGAAGCTCTACCACAGTGAT +
Preference number: 4 (lower is better)
Translates to: ITSYIIMFISIILGLAVWCGKDQ*KLYHSD
Trigger: ATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACA...CCAAACTGCTAGCCCTAGTATTATGGAGATGAACATGATGATGTAACTTGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR GCA 90 bp CAGGCAGGCACTAATGTTTCTAAAGCAACTGAAACATTTCCAAAGCATTTATTTTTGTTTTCCTTCCACTaGACAGGCACATACTGGTAT +
Preference number: 4 (lower is better)
Translates to: QAGTNVSKATETFPKHLFLFSFH*TGTYWY
Trigger: ATACCAGTATGTGCCTGTGCAGTGGAAGGAAAACAA...AAATAAATGCTTTGGAAATGTTTCAGTTGCTTTAGAAACATTAGTGCCTGCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403579.1
ENST00000406900.5
CDS-3UTR CCA 90 bp ATGGCAAATATTTCAAAACTAAGGGGATCCAGGCAGGCACTAATGTTTCTAAAGCTTTGTCATACTTCATaGCTCTATGAAACTGTTCTG +
Preference number: 4 (lower is better)
Translates to: MANISKLRGSRQALMFLKLCHTS*LYETVL
Trigger: CAGAACAGTTTCATAGAGCCATGAAGTATGACAAAG...CTTTAGAAACATTAGTGCCTGCCTGGATCCCCTTAGTTTTGAAATATTTGCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp CTATCGAGTTCACAAGTAAACATTCATTTTGACATGCTAAAGTTCCTAATGCTGGGTTACAGCAAAGTTTaGCATATTCACCACCTAACC +
Preference number: 4 (lower is better)
Translates to: LSSSQVNIHFDMLKFLMLGYSKV*HIHHLT
Trigger: GGTTAGGTGGTGAATATGCCAAACTTTGCTGTAACC...CAGCATTAGGAACTTTAGCATGTCAAAATGAATGTTTACTTGTGAACTCGATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp ATTCATTTTGACATGCTAAAGTTCCTAATGCTGGTGGAACAATTCCTGTACCTGTTACTCTTAGCTGCTTaGTCTAAAAGTGTGACAATC +
Preference number: 4 (lower is better)
Translates to: IHFDMLKFLMLVEQFLYLLLLAA*SKSVTI
Trigger: GATTGTCACACTTTTAGACCAAGCAGCTAAGAGTAA...CAGGTACAGGAATTGTTCCACCAGCATTAGGAACTTTAGCATGTCAAAATGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp ATGGCAAATATTTCAAAACTAAGGGGATCCAGGCAGGCACTAATGTTTCTAAAGAGTTTGTACTTCCTGTaGTTTTTCTTCCATACAACC +
Preference number: 4 (lower is better)
Translates to: MANISKLRGSRQALMFLKSLYFL*FFFHTT
Trigger: GGTTGTATGGAAGAAAAACCACAGGAAGTACAAACT...CTTTAGAAACATTAGTGCCTGCCTGGATCCCCTTAGTTTTGAAATATTTGCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp CAGGCAGGCACTAATGTTTCTAAAGCAACTGAAACATTTCCAAAGCATTTATTTTATCTGACAAGGCTATaGATTTGTGACAGAGAGATG +
Preference number: 4 (lower is better)
Translates to: QAGTNVSKATETFPKHLFYLTRL*ICDREM
Trigger: CATCTCTCTGTCACAAATTCATAGCCTTGTCAGATA...AAATAAATGCTTTGGAAATGTTTCAGTTGCTTTAGAAACATTAGTGCCTGCCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp CTATCGAGTTCACAAGTAAACATTCATTTTGACATGCTAAAGTTCCTAATGCTGTATCTGACAAGGCTATaGATTTGTGACAGAGAGATG +
Preference number: 4 (lower is better)
Translates to: LSSSQVNIHFDMLKFLMLYLTRL*ICDREM
Trigger: CATCTCTCTGTCACAAATTCATAGCCTTGTCAGATA...CAGCATTAGGAACTTTAGCATGTCAAAATGAATGTTTACTTGTGAACTCGATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp ACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATTTAAACAACCTATTAATTAATATCTaGGGCACTTCATGGGGTATG +
Preference number: 4 (lower is better)
Translates to: TCGKDQCKLYHSDRYLNNLLINI*GTSWGM
Trigger: CATACCCCATGAAGTGCCTCAGATATTAATTAATAG...GTTGTTTAAATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp ATTACAAGTTACATCATCATGTTCATCTCCATAATACTAGGGCTAGCAGTTTGGCTATTAATTAATATCTaGGGCACTTCATGGGGTATG +
Preference number: 4 (lower is better)
Translates to: ITSYIIMFISIILGLAVWLLINI*GTSWGM
Trigger: CATACCCCATGAAGTGCCTCAGATATTAATTAATAG...CCAAACTGCTAGCCCTAGTATTATGGAGATGAACATGATGATGTAACTTGTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR GCA 90 bp CAGGCAGGCACTAATGTTTCTAAAGCAACTGAAACATTTCCAAAGCATTTATTTTGTTCTGGGTATAGTTaGGAAGTAGTTTTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: QAGTNVSKATETFPKHLFCSGYS*EVVFLP
Trigger: AGGAAGGAAAACTACTTCGCAACTATACCCAGAACA...AAATAAATGCTTTGGAAATGTTTCAGTTGCTTTAGAAACATTAGTGCCTGCCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR GCA 90 bp ATTCATTTTGACATGCTAAAGTTCCTAATGCTGGTGGAACAATTCCTGTACCTGTATAGCTTCATTAATTaGCTCTTGATCATCTCCATC +
Preference number: 4 (lower is better)
Translates to: IHFDMLKFLMLVEQFLYLYSFIN*LLIISI
Trigger: GATGGAGATGATCAAGAGGCAATTAATGAAGCTATA...CAGGTACAGGAATTGTTCCACCAGCATTAGGAACTTTAGCATGTCAAAATGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp ACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATTTAAACAACTTACTCTTAGCTGCTTaGTCTAAAAGTGTGACAATC +
Preference number: 4 (lower is better)
Translates to: TCGKDQCKLYHSDRYLNNLLLAA*SKSVTI
Trigger: GATTGTCACACTTTTAGACCAAGCAGCTAAGAGTAA...GTTGTTTAAATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp CTCCCAATGGGAGACATGTACTTTCTGGCTGAATTACAATTAACATCTTATTACAGTTTGTACTTCCTGTaGTTTTTCTTCCATACAACC +
Preference number: 4 (lower is better)
Translates to: LPMGDMYFLAELQLTSYYSLYFL*FFFHTT
Trigger: GGTTGTATGGAAGAAAAACCACAGGAAGTACAAACT...GTAATAAGATGTTAATTGTAATTCAGCCAGAAAGTACATGTCTCCCATTGGGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp ACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATTTAAACAACAGTTTGTACTTCCTGTaGTTTTTCTTCCATACAACC +
Preference number: 4 (lower is better)
Translates to: TCGKDQCKLYHSDRYLNNSLYFL*FFFHTT
Trigger: GGTTGTATGGAAGAAAAACCACAGGAAGTACAAACT...GTTGTTTAAATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp ATTACAAGTTACATCATCATGTTCATCTCCATAATACTAGGGCTAGCAGTTTGGAATATTACACCTTTCTaGTTTCCTTGCTCTATCGAG +
Preference number: 4 (lower is better)
Translates to: ITSYIIMFISIILGLAVWNITPF*FPCSIE
Trigger: CTCGATAGAGCAAGGAAACCAGAAAGGTGTAATATT...CCAAACTGCTAGCCCTAGTATTATGGAGATGAACATGATGATGTAACTTGTAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp ACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATTTAAACAACGAAAATACCATTCTTTaGTCTAGATTAGCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: TCGKDQCKLYHSDRYLNNENTIL*SRLAVP
Trigger: GGGAACAGCTAATCTAGACCAAAGAATGGTATTTTC...GTTGTTTAAATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp CTCCCAATGGGAGACATGTACTTTCTGGCTGAATTACAATTAACATCTTATTACGAAAATACCATTCTTTaGTCTAGATTAGCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: LPMGDMYFLAELQLTSYYENTIL*SRLAVP
Trigger: GGGAACAGCTAATCTAGACCAAAGAATGGTATTTTC...GTAATAAGATGTTAATTGTAATTCAGCCAGAAAGTACATGTCTCCCATTGGGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp CTATCGAGTTCACAAGTAAACATTCATTTTGACATGCTAAAGTTCCTAATGCTGCTAGGGCTAGCAGTTTaGTATTTAACACCAAATCCT +
Preference number: 4 (lower is better)
Translates to: LSSSQVNIHFDMLKFLMLLGLAV*YLTPNP
Trigger: AGGATTTGGTGTTAAATACCAAACTGCTAGCCCTAG...CAGCATTAGGAACTTTAGCATGTCAAAATGAATGTTTACTTGTGAACTCGATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp CTATCGAGTTCACAAGTAAACATTCATTTTGACATGCTAAAGTTCCTAATGCTGACATCAAAATGCAGATaGGGCAAAGGTTCTCTATTA +
Preference number: 4 (lower is better)
Translates to: LSSSQVNIHFDMLKFLMLTSKCR*GKGSLL
Trigger: TAATAGAGAACCTTTGCCTCATCTGCATTTTGATGT...CAGCATTAGGAACTTTAGCATGTCAAAATGAATGTTTACTTGTGAACTCGATAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR TCA 90 bp CTATCGAGTTCACAAGTAAACATTCATTTTGACATGCTAAAGTTCCTAATGCTGTCTTCTTTGCAAACTTaGAGAATGGTCTTGGATCTT +
Preference number: 4 (lower is better)
Translates to: LSSSQVNIHFDMLKFLMLSSLQT*RMVLDL
Trigger: AAGATCCAAGACCATTCTTCAAGTTTGCAAAGAAGA...CAGCATTAGGAACTTTAGCATGTCAAAATGAATGTTTACTTGTGAACTCGATAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406900.5
CDS-3UTR GCA 90 bp CTCCCAATGGGAGACATGTACTTTCTGGCTGAATTACAATTAACATCTTATTACTCCTTCTACTCACACTaGATGTCATTTGAGATTTTA +
Preference number: 4 (lower is better)
Translates to: LPMGDMYFLAELQLTSYYSFYSH*MSFEIL
Trigger: TAAAATCTCAAATGACATGCAGTGTGAGTAGAAGGA...GTAATAAGATGTTAATTGTAATTCAGCCAGAAAGTACATGTCTCCCATTGGGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR GCA 90 bp CAGTTTAATACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATATGCTGTTTCTTCTTTaGAAACTTGAAGAATGGTCT +
Preference number: 4 (lower is better)
Translates to: QFNTCGKDQCKLYHSDRYMLFLL*KLEEWS
Trigger: AGACCATTCTTCAAGTTTGCAAAGAAGAAACAGCAT...ATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGTATTAAACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406900.5
CDS-3UTR CCA 90 bp CTATCGAGTTCACAAGTAAACATTCATTTTGACATGCTAAAGTTCCTAATGCTGCTTTGTCATACTTCATaGCTCTATGAAACTGTTCTG +
Preference number: 4 (lower is better)
Translates to: LSSSQVNIHFDMLKFLMLLCHTS*LYETVL
Trigger: CAGAACAGTTTCATAGAGCCATGAAGTATGACAAAG...CAGCATTAGGAACTTTAGCATGTCAAAATGAATGTTTACTTGTGAACTCGATAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp CAGGCAGGCACTAATGTTTCTAAAGCAACTGAAACATTTCCAAAGCATTTATTTGAAAATACCATTCTTTaGTCTAGATTAGCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: QAGTNVSKATETFPKHLFENTIL*SRLAVP
Trigger: GGGAACAGCTAATCTAGACCAAAGAATGGTATTTTC...AAATAAATGCTTTGGAAATGTTTCAGTTGCTTTAGAAACATTAGTGCCTGCCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
3UTR CAA 72 bp CTACATGTCCACAGGAAGTACAAAAGCCATCTTCATTaGAACGTAAATACAATAATCCTGAAATTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: LHVHRKYKSHLH*NVNTIILKFLA
Trigger: TGCTAAGAATTTCAGGATTATTGTATTTACGTTCAAATGAAGATGGCTTTTGTACTTCCTGTGGACATGTAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR GCA 90 bp CTATCGAGTTCACAAGTAAACATTCATTTTGACATGCTAAAGTTCCTAATGCTGTATAGCTTCATTAATTaGCTCTTGATCATCTCCATC +
Preference number: 4 (lower is better)
Translates to: LSSSQVNIHFDMLKFLMLYSFIN*LLIISI
Trigger: GATGGAGATGATCAAGAGGCAATTAATGAAGCTATA...CAGCATTAGGAACTTTAGCATGTCAAAATGAATGTTTACTTGTGAACTCGATAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CCA 90 bp CAGGCAGGCACTAATGTTTCTAAAGCAACTGAAACATTTCCAAAGCATTTATTTTGCAAACTTGAAGAATaGTCTTGGATCTTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: QAGTNVSKATETFPKHLFCKLEE*SWIFSE
Trigger: TTCAGAAAAGATCCAAGACCATTCTTCAAGTTTGCA...AAATAAATGCTTTGGAAATGTTTCAGTTGCTTTAGAAACATTAGTGCCTGCCTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000212015.11
ENST00000406900.5
ENST00000432464.5
CDS GCA 90 bp CGCCCGGGCTCCGCTCGAGGCCGGGACCATCTCTCCGCGGCCTCTTaGGGAGCGGCTCCCCGGCGGGGGACGACGCGGCCTCCCTGTCGG +
Preference number: 5 (lower is better)
Translates to: RPGSARGRDHLSAAS*GAAPRRGTTRPPCR
Trigger: CCGACAGGGAGGCCGCGTCGTCCCCCGCCGGGGAGCCGCTCCGCAAGAGGCCGCGGAGAGATGGTCCCGGCCTCGAGCGGAGCCCGGGCG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000212015.11
CDS TCA 90 bp GCGGCCTCCCTGTCGGCCCCCGCCGCCGAGGGGGAGCCGCCGGGCTaGAGGGCGAGGGCCGCCTCGTCCGCCATCTTCCAACTGCCTCTC +
Preference number: 5 (lower is better)
Translates to: AASLSAPAAEGEPPG*RARAASSAIFQLPL
Trigger: GAGAGGCAGTTGGAAGATGGCGGACGAGGCGGCCCTCGCCCTTCAGCCCGGCGGCTCCCCCTCGGCGGCGGGGGCCGACAGGGAGGCCGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000212015.11
CDS GCA 90 bp GGCCCATTGTCTCCTTCCCCAGCCGCCGCAGTCGCCTGGGCCTCTTaGTCCCCGCCTGCCGCCGCCGCCTCTGCCTCCGCCTCCCGCCAC +
Preference number: 5 (lower is better)
Translates to: GPLSPSPAAAVAWAS*SPPAAAASASASRH
Trigger: GTGGCGGGAGGCGGAGGCAGAGGCGGCGGCGGCAGGCGGGGAGCAAGAGGCCCAGGCGACTGCGGCGGCTGGGGAAGGAGACAATGGGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000212015.11
CDS CCA 90 bp TGCAGGCCCGGCCCATTGTCTCCTTCCCCAGCCGCCGCAGTCGCCTaGGCCTCTTGCTCCCCGCCTGCCGCCGCCGCCTCTGCCTCCGCC +
Preference number: 5 (lower is better)
Translates to: CRPGPLSPSPAAAVA*ASCSPPAAAASASA
Trigger: GGCGGAGGCAGAGGCGGCGGCGGCAGGCGGGGAGCAAGAGGCCCAGGCGACTGCGGCGGCTGGGGAAGGAGACAATGGGCCGGGCCTGCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000212015.11
CDS GCA 90 bp TCGTCGTACAAGTTGTCGGCCAGCGGTGGCTCCCGAGATGGGCCCTaGAGGCCCGGCCCATTGTCTCCTTCCCCAGCCGCCGCAGTCGCC +
Preference number: 5 (lower is better)
Translates to: SSYKLSASGGSRDGP*RPGPLSPSPAAAVA
Trigger: GGCGACTGCGGCGGCTGGGGAAGGAGACAATGGGCCGGGCCTGCAGGGCCCATCTCGGGAGCCACCGCTGGCCGACAACTTGTACGACGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000212015.11
CDS CCA 90 bp GTCGTCTTCGTCGTACAAGTTGTCGGCCAGCGGTGGCTCCCGAGATaGGCCCTGCAGGCCCGGCCCATTGTCTCCTTCCCCAGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: VVFVVQVVGQRWLPR*ALQARPIVSFPSRR
Trigger: GCGGCGGCTGGGGAAGGAGACAATGGGCCGGGCCTGCAGGGCCCATCTCGGGAGCCACCGCTGGCCGACAACTTGTACGACGAAGACGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000212015.11
CDS CCA 90 bp GCCCTCGTCGTCGTCGTCTTCGTCGTACAAGTTGTCGGCCAGCGGTaGCTCCCGAGATGGGCCCTGCAGGCCCGGCCCATTGTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: ALVVVVFVVQVVGQR*LPRWALQARPIVSF
Trigger: GAAGGAGACAATGGGCCGGGCCTGCAGGGCCCATCTCGGGAGCCACCGCTGGCCGACAACTTGTACGACGAAGACGACGACGACGAGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000212015.11
CDS-3UTR CAA 90 bp AAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACTGTGCAGGCCCGGCCCATaGTCTCCTTCCCCAGCCGCC +
Preference number: 5 (lower is better)
Translates to: KDNRVLSPHIVDFLLLTLCRPGP*SPSPAA
Trigger: GGCGGCTGGGGAAGGAGACAATGGGCCGGGCCTGCA...CAGTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000212015.11
CDS-3UTR CAA 90 bp CTATCGAGTTCACAAGTAAACATTCATTTTGACATGCTAAAGTTCCTAATGCTGAGTCGCCTGGGCCTCTaGCTCCCCGCCTGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: LSSSQVNIHFDMLKFLMLSRLGL*LPACRR
Trigger: GCGGCGGCAGGCGGGGAGCAAGAGGCCCAGGCGACT...CAGCATTAGGAACTTTAGCATGTCAAAATGAATGTTTACTTGTGAACTCGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000212015.11
CDS-3UTR CAA 90 bp GTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACTCTTCGTCGTACAAGTaGTCGGCCAGCGGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: VKTTECSPHILLTSFYSHSSSYK*SASGGS
Trigger: GGAGCCACCGCTGGCCGACAACTTGTACGACGAAGA...GTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000212015.11
CDS TCA 90 bp TGGACCTATCCGTGGCCTTGGAGTCCAGTCACTAGAGCTTGCATGTaGGGCTCTATCCTCCTCATCACTTTCACAGGAATGAAAACCATT +
Preference number: 5 (lower is better)
Translates to: WTYPWPWSPVTRACM*GSILLITFTGMKTI
Trigger: AATGGTTTTCATTCCTGTGAAAGTGATGAGGAGGATAGAGCCTCACATGCAAGCTCTAGTGACTGGACTCCAAGGCCACGGATAGGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000212015.11
ENST00000497639.5
CDS TCA 90 bp GACACCTATCCGTGGCCTTGGAGTCCAGTCACTAGAGCTTGCATGTaGGGCTCTATCCTCCTCATCACTTTCACAGGAATGAAAACCATT +
Preference number: 5 (lower is better)
Translates to: DTYPWPWSPVTRACM*GSILLITFTGMKTI
Trigger: AATGGTTTTCATTCCTGTGAAAGTGATGAGGAGGATAGAGCCTCACATGCAAGCTCTAGTGACTGGACTCCAAGGCCACGGATAGGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432464.5
ENST00000473922.1
CDS TCA 90 bp CTGGGAAGTCTACAGCAAGGCGAGCATAAATACCATCCCTTGACCTaGAGTCAGGTATTCCACATGAAACAGACACCTATCCGTGGCCTT +
Preference number: 5 (lower is better)
Translates to: LGSLQQGEHKYHPLT*SQVFHMKQTPIRGL
Trigger: AAGGCCACGGATAGGTGTCTGTTTCATGTGGAATACCTGACTTCAGGTCAAGGGATGGTATTTATGCTCGCCTTGCTGTAGACTTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432464.5
ENST00000473922.1
CDS-3UTR CAA 90 bp AAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACTGCATGGGGTATGGAACTaGGAATTAGTGCTACTGGTC +
Preference number: 5 (lower is better)
Translates to: KDNRVLSPHIVDFLLLTLHGVWN*ELVLLV
Trigger: GACCAGTAGCACTAATTCCAAGTTCCATACCCCATG...CAGTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp AGTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACATGGGTTCTTCTAAACTaGGACTCTGGCATGTCCCAC +
Preference number: 5 (lower is better)
Translates to: SKDNRVLSPHIVDFLLLTWVLLN*DSGMSH
Trigger: GTGGGACATGCCAGAGTCCAAGTTTAGAAGAACCCA...TGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp AGTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACATCAGGCAAGATGCTGTaGCAAAGGAACCATGACACT +
Preference number: 5 (lower is better)
Translates to: SKDNRVLSPHIVDFLLLTSGKML*QRNHDT
Trigger: AGTGTCATGGTTCCTTTGCAACAGCATCTTGCCTGA...TGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp AAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACTGGCTACTGGTCTTACTTaGAGGGAAGACCCAATAACA +
Preference number: 5 (lower is better)
Translates to: KDNRVLSPHIVDFLLLTLATGLT*REDPIT
Trigger: TGTTATTGGGTCTTCCCTCAAAGTAAGACCAGTAGC...CAGTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp GTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACGCTACTGGTCTTACTTaGAGGGAAGACCCAATAACA +
Preference number: 5 (lower is better)
Translates to: VKTTECSPHILLTSFYSHATGLT*REDPIT
Trigger: TGTTATTGGGTCTTCCCTCAAAGTAAGACCAGTAGC...GTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp GTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACGGGTTACAGCAAAGTTaGGCATATTCACCACCTAAC +
Preference number: 5 (lower is better)
Translates to: VKTTECSPHILLTSFYSHGLQQS*AYSPPN
Trigger: GTTAGGTGGTGAATATGCCAAACTTTGCTGTAACCC...GTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp AAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACTGTCTCCCCACATATTGTaGACTTCCTTCTACTCACAC +
Preference number: 5 (lower is better)
Translates to: KDNRVLSPHIVDFLLLTLSPHIL*TSFYSH
Trigger: GTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGA...CAGTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp GTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACATAATCAGGGGCCTGTaGCTCTCCTCATTAATGGAA +
Preference number: 5 (lower is better)
Translates to: VKTTECSPHILLTSFYSHIIRGL*LSSLME
Trigger: TTCCATTAATGAGGAGAGCAACAGGCCCCTGATTAT...GTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp AAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACTGATAATCAGGGGCCTGTaGCTCTCCTCATTAATGGAA +
Preference number: 5 (lower is better)
Translates to: KDNRVLSPHIVDFLLLTLIIRGL*LSSLME
Trigger: TTCCATTAATGAGGAGAGCAACAGGCCCCTGATTAT...CAGTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp GTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACACTCAGGTGGAGGTATaGTTTCCGGCAATAAATCTT +
Preference number: 5 (lower is better)
Translates to: VKTTECSPHILLTSFYSHTQVEV*FPAINL
Trigger: AAGATTTATTGCCGGAAACAATACCTCCACCTGAGT...GTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000212015.11
CDS-3UTR CAA 90 bp TTACTTTGGAACTGTATAATCAGGGGCCTGTTGCTCTCCTCATTAATGGAAAACTGGGTTCTTCTAAACTaGGACTCTGGCATGTCCCAC +
Preference number: 5 (lower is better)
Translates to: LLWNCIIRGLLLSSLMENWVLLN*DSGMSH
Trigger: GTGGGACATGCCAGAGTCCAAGTTTAGAAGAACCCA...GTTTTCCATTAATGAGGAGAGCAACAGGCCCCTGATTATACAGTTCCAAAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp AAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACTGTTCATTAATTGCCTCTaGATCATCTCCATCAGTCCC +
Preference number: 5 (lower is better)
Translates to: KDNRVLSPHIVDFLLLTLFINCL*IISISP
Trigger: GGGACTGATGGAGATGATCAAGAGGCAATTAATGAA...CAGTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp AGTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACATGCTCTCCCCACATATaGTTGACTTCCTTCTACTCA +
Preference number: 5 (lower is better)
Translates to: SKDNRVLSPHIVDFLLLTCSPHI*LTSFYS
Trigger: TGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCA...TGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp AGTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACAATAATCAGGGGCCTGTaGCTCTCCTCATTAATGGAA +
Preference number: 5 (lower is better)
Translates to: SKDNRVLSPHIVDFLLLTIIRGL*LSSLME
Trigger: TTCCATTAATGAGGAGAGCAACAGGCCCCTGATTAT...TGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp GTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACACTAGGGCTAGCAGTTaGGTATTTAACACCAAATCC +
Preference number: 5 (lower is better)
Translates to: VKTTECSPHILLTSFYSHTRASS*VFNTKS
Trigger: GGATTTGGTGTTAAATACCAAACTGCTAGCCCTAGT...GTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS CCA 90 bp TCAATTTCACTTTCATCCTCCATGGGTTCTTCTAAACTTGGACTCTaGCATGTCCCACTATCACTGTTACTGCCACAAGAACTAGAGGAT +
Preference number: 5 (lower is better)
Translates to: SISLSSSMGSSKLGL*HVPLSLLLPQELED
Trigger: ATCCTCTAGTTCTTGTGGCAGTAACAGTGATAGTGGGACATGCCAGAGTCCAAGTTTAGAAGAACCCATGGAGGATGAAAGTGAAATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp TTACTTTGGAACTGTATAATCAGGGGCCTGTTGCTCTCCTCATTAATGGAAAACCATGGGGTATGGAACTaGGAATTAGTGCTACTGGTC +
Preference number: 5 (lower is better)
Translates to: LLWNCIIRGLLLSSLMENHGVWN*ELVLLV
Trigger: GACCAGTAGCACTAATTCCAAGTTCCATACCCCATG...GTTTTCCATTAATGAGGAGAGCAACAGGCCCCTGATTATACAGTTCCAAAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp AGTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACAACTAGGGCTAGCAGTTaGGTATTTAACACCAAATCC +
Preference number: 5 (lower is better)
Translates to: SKDNRVLSPHIVDFLLLTTRASS*VFNTKS
Trigger: GGATTTGGTGTTAAATACCAAACTGCTAGCCCTAGT...TGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp TTACTTTGGAACTGTATAATCAGGGGCCTGTTGCTCTCCTCATTAATGGAAAACGCTACTGGTCTTACTTaGAGGGAAGACCCAATAACA +
Preference number: 5 (lower is better)
Translates to: LLWNCIIRGLLLSSLMENATGLT*REDPIT
Trigger: TGTTATTGGGTCTTCCCTCAAAGTAAGACCAGTAGC...GTTTTCCATTAATGAGGAGAGCAACAGGCCCCTGATTATACAGTTCCAAAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp TTACTTTGGAACTGTATAATCAGGGGCCTGTTGCTCTCCTCATTAATGGAAAACGGGTTACAGCAAAGTTaGGCATATTCACCACCTAAC +
Preference number: 5 (lower is better)
Translates to: LLWNCIIRGLLLSSLMENGLQQS*AYSPPN
Trigger: GTTAGGTGGTGAATATGCCAAACTTTGCTGTAACCC...GTTTTCCATTAATGAGGAGAGCAACAGGCCCCTGATTATACAGTTCCAAAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp GTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACACATAAGCCAATTCTTTTaGTGTTCGTGGAGGTTTTTC +
Preference number: 5 (lower is better)
Translates to: VKTTECSPHILLTSFYSHISQFF*CSWRFF
Trigger: GAAAAACCTCCACGAACACAAAAAGAATTGGCTTAT...GTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp CAGTTTAATACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATTGGGTTCTTCTAAACTaGGACTCTGGCATGTCCCAC +
Preference number: 5 (lower is better)
Translates to: QFNTCGKDQCKLYHSDRYWVLLN*DSGMSH
Trigger: GTGGGACATGCCAGAGTCCAAGTTTAGAAGAACCCA...ATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGTATTAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp CTCCCAATGGGAGACATGTACTTTCTGGCTGAATTACAATTAACATCTTATTACTGGGTTCTTCTAAACTaGGACTCTGGCATGTCCCAC +
Preference number: 5 (lower is better)
Translates to: LPMGDMYFLAELQLTSYYWVLLN*DSGMSH
Trigger: GTGGGACATGCCAGAGTCCAAGTTTAGAAGAACCCA...GTAATAAGATGTTAATTGTAATTCAGCCAGAAAGTACATGTCTCCCATTGGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp TTACTTTGGAACTGTATAATCAGGGGCCTGTTGCTCTCCTCATTAATGGAAAACACCTTTCTGGTTTCCTaGCTCTATCGAGTTCACAAG +
Preference number: 5 (lower is better)
Translates to: LLWNCIIRGLLLSSLMENTFLVS*LYRVHK
Trigger: CTTGTGAACTCGATAGAGCAAGGAAACCAGAAAGGT...GTTTTCCATTAATGAGGAGAGCAACAGGCCCCTGATTATACAGTTCCAAAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp TTACTTTGGAACTGTATAATCAGGGGCCTGTTGCTCTCCTCATTAATGGAAAACCTCATGAATGCTGAGTaGCTGGATTTTGTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: LLWNCIIRGLLLSSLMENLMNAE*LDFVCV
Trigger: CACACACACAAAATCCAGCAACTCAGCATTCATGAG...GTTTTCCATTAATGAGGAGAGCAACAGGCCCCTGATTATACAGTTCCAAAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403579.1
ENST00000406900.5
CDS-3UTR CAA 90 bp AGTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACATGGTATAGTATAGAGTaGCTCATGAATGCTGAGTTG +
Preference number: 5 (lower is better)
Translates to: SKDNRVLSPHIVDFLLLTWYSIE*LMNAEL
Trigger: CAACTCAGCATTCATGAGCAACTCTATACTATACCA...TGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403579.1
ENST00000406900.5
CDS TCA 90 bp GAGCTTGCATGTGAGGCTCTATCCTCCTCATCACTTTCACAGGAATaGAAACCATTAGTGATAATTTCATCACCGAACAGAAGGTTATCT +
Preference number: 5 (lower is better)
Translates to: ELACEALSSSSLSQE*KPLVIISSPNRRLS
Trigger: AGATAACCTTCTGTTCGGTGATGAAATTATCACTAATGGTTTTCATTCCTGTGAAAGTGATGAGGAGGATAGAGCCTCACATGCAAGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000432464.5
ENST00000473922.1
ENST00000497639.5
CDS-3UTR CAA 90 bp ATGGCAAATATTTCAAAACTAAGGGGATCCAGGCAGGCACTAATGTTTCTAAAGACACTGAATTATCCTTaGGATTCCCGCAACCTGTTC +
Preference number: 5 (lower is better)
Translates to: MANISKLRGSRQALMFLKTLNYP*DSRNLF
Trigger: GAACAGGTTGCGGGAATCCAAAGGATAATTCAGTGT...CTTTAGAAACATTAGTGCCTGCCTGGATCCCCTTAGTTTTGAAATATTTGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp ATTACAAGTTACATCATCATGTTCATCTCCATAATACTAGGGCTAGCAGTTTGGTCAGGCAAGATGCTGTaGCAAAGGAACCATGACACT +
Preference number: 5 (lower is better)
Translates to: ITSYIIMFISIILGLAVWSGKML*QRNHDT
Trigger: AGTGTCATGGTTCCTTTGCAACAGCATCTTGCCTGA...CCAAACTGCTAGCCCTAGTATTATGGAGATGAACATGATGATGTAACTTGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp CAGTTTAATACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATCATGGGGTATGGAACTaGGAATTAGTGCTACTGGTC +
Preference number: 5 (lower is better)
Translates to: QFNTCGKDQCKLYHSDRYHGVWN*ELVLLV
Trigger: GACCAGTAGCACTAATTCCAAGTTCCATACCCCATG...ATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGTATTAAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp AGTAAAGACAACCGAGTGCTCTCCCCACATATTGTTGACTTCCTTCTACTCACAGGAAAATGTAACGATTaGGTGGCAAAAACAGATACT +
Preference number: 5 (lower is better)
Translates to: SKDNRVLSPHIVDFLLLTGKCND*VAKTDT
Trigger: AGTATCTGTTTTTGCCACCAAATCGTTACATTTTCC...TGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCACTCGGTTGTCTTTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp TTACTTTGGAACTGTATAATCAGGGGCCTGTTGCTCTCCTCATTAATGGAAAACTTCATTAATTGCCTCTaGATCATCTCCATCAGTCCC +
Preference number: 5 (lower is better)
Translates to: LLWNCIIRGLLLSSLMENFINCL*IISISP
Trigger: GGGACTGATGGAGATGATCAAGAGGCAATTAATGAA...GTTTTCCATTAATGAGGAGAGCAACAGGCCCCTGATTATACAGTTCCAAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp ATTCATTTTGACATGCTAAAGTTCCTAATGCTGGTGGAACAATTCCTGTACCTGTCTCCCCACATATTGTaGACTTCCTTCTACTCACAC +
Preference number: 5 (lower is better)
Translates to: IHFDMLKFLMLVEQFLYLSPHIL*TSFYSH
Trigger: GTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGA...CAGGTACAGGAATTGTTCCACCAGCATTAGGAACTTTAGCATGTCAAAATGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp ATTCATTTTGACATGCTAAAGTTCCTAATGCTGGTGGAACAATTCCTGTACCTGTGCTCTCCCCACATATaGTTGACTTCCTTCTACTCA +
Preference number: 5 (lower is better)
Translates to: IHFDMLKFLMLVEQFLYLCSPHI*LTSFYS
Trigger: TGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCA...CAGGTACAGGAATTGTTCCACCAGCATTAGGAACTTTAGCATGTCAAAATGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp ATTCATTTTGACATGCTAAAGTTCCTAATGCTGGTGGAACAATTCCTGTACCTGATAATCAGGGGCCTGTaGCTCTCCTCATTAATGGAA +
Preference number: 5 (lower is better)
Translates to: IHFDMLKFLMLVEQFLYLIIRGL*LSSLME
Trigger: TTCCATTAATGAGGAGAGCAACAGGCCCCTGATTAT...CAGGTACAGGAATTGTTCCACCAGCATTAGGAACTTTAGCATGTCAAAATGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp ATTACAAGTTACATCATCATGTTCATCTCCATAATACTAGGGCTAGCAGTTTGGCTGAGTTGCTGGATTTaGTGTGTGTGTTTTTCCCCC +
Preference number: 5 (lower is better)
Translates to: ITSYIIMFISIILGLAVWLSCWI*CVCFSP
Trigger: GGGGGAAAAACACACACACAAAATCCAGCAACTCAG...CCAAACTGCTAGCCCTAGTATTATGGAGATGAACATGATGATGTAACTTGTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403579.1
ENST00000406900.5
CDS-3UTR CAA 90 bp ATGGCAAATATTTCAAAACTAAGGGGATCCAGGCAGGCACTAATGTTTCTAAAGCTCATGAATGCTGAGTaGCTGGATTTTGTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: MANISKLRGSRQALMFLKLMNAE*LDFVCV
Trigger: CACACACACAAAATCCAGCAACTCAGCATTCATGAG...CTTTAGAAACATTAGTGCCTGCCTGGATCCCCTTAGTTTTGAAATATTTGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403579.1
ENST00000406900.5
CDS TCA 90 bp TTGCGAAGTAGTTTTCCTTCCTTATCTGACAAGGCTATGAATTTGTaGCAGAGAGATGGCTGGAATTGTCCAGGATATATTTCCTTTGCA +
Preference number: 5 (lower is better)
Translates to: LRSSFPSLSDKAMNL*QRDGWNCPGYISFA
Trigger: TGCAAAGGAAATATATCCTGGACAATTCCAGCCATCTCTCTGTCACAAATTCATAGCCTTGTCAGATAAGGAAGGAAAACTACTTCGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000212015.11
ENST00000432464.5
ENST00000473922.1
CDS TCA 90 bp GGGTATAGTTGCGAAGTAGTTTTCCTTCCTTATCTGACAAGGCTATaGATTTGTGACAGAGAGATGGCTGGAATTGTCCAGGATATATTT +
Preference number: 5 (lower is better)
Translates to: GYSCEVVFLPYLTRL*ICDREMAGIVQDIF
Trigger: AAATATATCCTGGACAATTCCAGCCATCTCTCTGTCACAAATTCATAGCCTTGTCAGATAAGGAAGGAAAACTACTTCGCAACTATACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS CCA 90 bp TGGATCTTTTCTGAAATATTCAATATCAAACATCGCTTGAGGATCTaGAAGATCTGGGAAGTCTACAGCAAGGCGAGCATAAATACCATC +
Preference number: 5 (lower is better)
Translates to: WIFSEIFNIKHRLRI*KIWEVYSKASINTI
Trigger: GATGGTATTTATGCTCGCCTTGCTGTAGACTTCCCAGATCTTCCAGATCCTCAAGCGATGTTTGATATTGAATATTTCAGAAAAGATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000212015.11
ENST00000432464.5
ENST00000473922.1
CDS-3UTR CAA 90 bp ATTACAAGTTACATCATCATGTTCATCTCCATAATACTAGGGCTAGCAGTTTGGACACTGAATTATCCTTaGGATTCCCGCAACCTGTTC +
Preference number: 5 (lower is better)
Translates to: ITSYIIMFISIILGLAVWTLNYP*DSRNLF
Trigger: GAACAGGTTGCGGGAATCCAAAGGATAATTCAGTGT...CCAAACTGCTAGCCCTAGTATTATGGAGATGAACATGATGATGTAACTTGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp CTCCCAATGGGAGACATGTACTTTCTGGCTGAATTACAATTAACATCTTATTACACACTGAATTATCCTTaGGATTCCCGCAACCTGTTC +
Preference number: 5 (lower is better)
Translates to: LPMGDMYFLAELQLTSYYTLNYP*DSRNLF
Trigger: GAACAGGTTGCGGGAATCCAAAGGATAATTCAGTGT...GTAATAAGATGTTAATTGTAATTCAGCCAGAAAGTACATGTCTCCCATTGGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp CAGTTTAATACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATACACTGAATTATCCTTaGGATTCCCGCAACCTGTTC +
Preference number: 5 (lower is better)
Translates to: QFNTCGKDQCKLYHSDRYTLNYP*DSRNLF
Trigger: GAACAGGTTGCGGGAATCCAAAGGATAATTCAGTGT...ATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGTATTAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp CTATCGAGTTCACAAGTAAACATTCATTTTGACATGCTAAAGTTCCTAATGCTGTCAGGCAAGATGCTGTaGCAAAGGAACCATGACACT +
Preference number: 5 (lower is better)
Translates to: LSSSQVNIHFDMLKFLMLSGKML*QRNHDT
Trigger: AGTGTCATGGTTCCTTTGCAACAGCATCTTGCCTGA...CAGCATTAGGAACTTTAGCATGTCAAAATGAATGTTTACTTGTGAACTCGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp CAGGCAGGCACTAATGTTTCTAAAGCAACTGAAACATTTCCAAAGCATTTATTTCATGGGGTATGGAACTaGGAATTAGTGCTACTGGTC +
Preference number: 5 (lower is better)
Translates to: QAGTNVSKATETFPKHLFHGVWN*ELVLLV
Trigger: GACCAGTAGCACTAATTCCAAGTTCCATACCCCATG...AAATAAATGCTTTGGAAATGTTTCAGTTGCTTTAGAAACATTAGTGCCTGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp CAGTTTAATACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATGGGTTACAGCAAAGTTaGGCATATTCACCACCTAAC +
Preference number: 5 (lower is better)
Translates to: QFNTCGKDQCKLYHSDRYGLQQS*AYSPPN
Trigger: GTTAGGTGGTGAATATGCCAAACTTTGCTGTAACCC...ATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGTATTAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp ACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATTTAAACAACACCTTTCTGGTTTCCTaGCTCTATCGAGTTCACAAG +
Preference number: 5 (lower is better)
Translates to: TCGKDQCKLYHSDRYLNNTFLVS*LYRVHK
Trigger: CTTGTGAACTCGATAGAGCAAGGAAACCAGAAAGGT...GTTGTTTAAATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp CAGTTTAATACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATACCTTTCTGGTTTCCTaGCTCTATCGAGTTCACAAG +
Preference number: 5 (lower is better)
Translates to: QFNTCGKDQCKLYHSDRYTFLVS*LYRVHK
Trigger: CTTGTGAACTCGATAGAGCAAGGAAACCAGAAAGGT...ATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGTATTAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp ATTACAAGTTACATCATCATGTTCATCTCCATAATACTAGGGCTAGCAGTTTGGTCTCCCCACATATTGTaGACTTCCTTCTACTCACAC +
Preference number: 5 (lower is better)
Translates to: ITSYIIMFISIILGLAVWSPHIL*TSFYSH
Trigger: GTGTGAGTAGAAGGAAGTCAACAATATGTGGGGAGA...CCAAACTGCTAGCCCTAGTATTATGGAGATGAACATGATGATGTAACTTGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp CAGTTTAATACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATTGCTCTCCCCACATATaGTTGACTTCCTTCTACTCA +
Preference number: 5 (lower is better)
Translates to: QFNTCGKDQCKLYHSDRYCSPHI*LTSFYS
Trigger: TGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCA...ATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGTATTAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp ATTACAAGTTACATCATCATGTTCATCTCCATAATACTAGGGCTAGCAGTTTGGTGCTCTCCCCACATATaGTTGACTTCCTTCTACTCA +
Preference number: 5 (lower is better)
Translates to: ITSYIIMFISIILGLAVWCSPHI*LTSFYS
Trigger: TGAGTAGAAGGAAGTCAACAATATGTGGGGAGAGCA...CCAAACTGCTAGCCCTAGTATTATGGAGATGAACATGATGATGTAACTTGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp ATTCATTTTGACATGCTAAAGTTCCTAATGCTGGTGGAACAATTCCTGTACCTGACTAGGGCTAGCAGTTaGGTATTTAACACCAAATCC +
Preference number: 5 (lower is better)
Translates to: IHFDMLKFLMLVEQFLYLTRASS*VFNTKS
Trigger: GGATTTGGTGTTAAATACCAAACTGCTAGCCCTAGT...CAGGTACAGGAATTGTTCCACCAGCATTAGGAACTTTAGCATGTCAAAATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp CTATCGAGTTCACAAGTAAACATTCATTTTGACATGCTAAAGTTCCTAATGCTGCTGAGTTGCTGGATTTaGTGTGTGTGTTTTTCCCCC +
Preference number: 5 (lower is better)
Translates to: LSSSQVNIHFDMLKFLMLLSCWI*CVCFSP
Trigger: GGGGGAAAAACACACACACAAAATCCAGCAACTCAG...CAGCATTAGGAACTTTAGCATGTCAAAATGAATGTTTACTTGTGAACTCGATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403579.1
ENST00000406900.5
CDS-3UTR CAA 90 bp CAGTTTAATACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATAATATCAAACATCGCTaGAGGATCTGGAAGATCTGG +
Preference number: 5 (lower is better)
Translates to: QFNTCGKDQCKLYHSDRYNIKHR*RIWKIW
Trigger: CCAGATCTTCCAGATCCTCAAGCGATGTTTGATATT...ATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGTATTAAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000212015.11
ENST00000432464.5
CDS-3UTR CAA 90 bp TTACTTTGGAACTGTATAATCAGGGGCCTGTTGCTCTCCTCATTAATGGAAAACGCTTCACAGTCAACTTaGTATTTACAAATCAGGCAA +
Preference number: 5 (lower is better)
Translates to: LLWNCIIRGLLLSSLMENASQST*YLQIRQ
Trigger: TTGCCTGATTTGTAAATACAAAGTTGACTGTGAAGC...GTTTTCCATTAATGAGGAGAGCAACAGGCCCCTGATTATACAGTTCCAAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp CTATCGAGTTCACAAGTAAACATTCATTTTGACATGCTAAAGTTCCTAATGCTGGCTACTGGTCTTACTTaGAGGGAAGACCCAATAACA +
Preference number: 5 (lower is better)
Translates to: LSSSQVNIHFDMLKFLMLATGLT*REDPIT
Trigger: TGTTATTGGGTCTTCCCTCAAAGTAAGACCAGTAGC...CAGCATTAGGAACTTTAGCATGTCAAAATGAATGTTTACTTGTGAACTCGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp CAGGCAGGCACTAATGTTTCTAAAGCAACTGAAACATTTCCAAAGCATTTATTTGGGTTACAGCAAAGTTaGGCATATTCACCACCTAAC +
Preference number: 5 (lower is better)
Translates to: QAGTNVSKATETFPKHLFGLQQS*AYSPPN
Trigger: GTTAGGTGGTGAATATGCCAAACTTTGCTGTAACCC...AAATAAATGCTTTGGAAATGTTTCAGTTGCTTTAGAAACATTAGTGCCTGCCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp ATTACAAGTTACATCATCATGTTCATCTCCATAATACTAGGGCTAGCAGTTTGGTTCATTAATTGCCTCTaGATCATCTCCATCAGTCCC +
Preference number: 5 (lower is better)
Translates to: ITSYIIMFISIILGLAVWFINCL*IISISP
Trigger: GGGACTGATGGAGATGATCAAGAGGCAATTAATGAA...CCAAACTGCTAGCCCTAGTATTATGGAGATGAACATGATGATGTAACTTGTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp CTATCGAGTTCACAAGTAAACATTCATTTTGACATGCTAAAGTTCCTAATGCTGACCTTTCTGGTTTCCTaGCTCTATCGAGTTCACAAG +
Preference number: 5 (lower is better)
Translates to: LSSSQVNIHFDMLKFLMLTFLVS*LYRVHK
Trigger: CTTGTGAACTCGATAGAGCAAGGAAACCAGAAAGGT...CAGCATTAGGAACTTTAGCATGTCAAAATGAATGTTTACTTGTGAACTCGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS TCA 90 bp TTGCGAAGTAGTTTTCCTTCCTTATCTGACAAGGCTATGAATTTGTaGCAGAGAGATGGCTGGAATTGTCCAGGATATATTTCCAAAATT +
Preference number: 5 (lower is better)
Translates to: LRSSFPSLSDKAMNL*QRDGWNCPGYISKI
Trigger: AATTTTGGAAATATATCCTGGACAATTCCAGCCATCTCTCTGTCACAAATTCATAGCCTTGTCAGATAAGGAAGGAAAACTACTTCGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403579.1
ENST00000406900.5
CDS-3UTR CAA 90 bp ATGGCAAATATTTCAAAACTAAGGGGATCCAGGCAGGCACTAATGTTTCTAAAGGCTTCACAGTCAACTTaGTATTTACAAATCAGGCAA +
Preference number: 5 (lower is better)
Translates to: MANISKLRGSRQALMFLKASQST*YLQIRQ
Trigger: TTGCCTGATTTGTAAATACAAAGTTGACTGTGAAGC...CTTTAGAAACATTAGTGCCTGCCTGGATCCCCTTAGTTTTGAAATATTTGCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp ATTCATTTTGACATGCTAAAGTTCCTAATGCTGGTGGAACAATTCCTGTACCTGATAAGCCAATTCTTTTaGTGTTCGTGGAGGTTTTTC +
Preference number: 5 (lower is better)
Translates to: IHFDMLKFLMLVEQFLYLISQFF*CSWRFF
Trigger: GAAAAACCTCCACGAACACAAAAAGAATTGGCTTAT...CAGGTACAGGAATTGTTCCACCAGCATTAGGAACTTTAGCATGTCAAAATGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp ATTCATTTTGACATGCTAAAGTTCCTAATGCTGGTGGAACAATTCCTGTACCTGGGAAAATGTAACGATTaGGTGGCAAAAACAGATACT +
Preference number: 5 (lower is better)
Translates to: IHFDMLKFLMLVEQFLYLGKCND*VAKTDT
Trigger: AGTATCTGTTTTTGCCACCAAATCGTTACATTTTCC...CAGGTACAGGAATTGTTCCACCAGCATTAGGAACTTTAGCATGTCAAAATGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp CTATCGAGTTCACAAGTAAACATTCATTTTGACATGCTAAAGTTCCTAATGCTGACTAGGGCTAGCAGTTaGGTATTTAACACCAAATCC +
Preference number: 5 (lower is better)
Translates to: LSSSQVNIHFDMLKFLMLTRASS*VFNTKS
Trigger: GGATTTGGTGTTAAATACCAAACTGCTAGCCCTAGT...CAGCATTAGGAACTTTAGCATGTCAAAATGAATGTTTACTTGTGAACTCGATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp ATTACAAGTTACATCATCATGTTCATCTCCATAATACTAGGGCTAGCAGTTTGGTGGTATAGTATAGAGTaGCTCATGAATGCTGAGTTG +
Preference number: 5 (lower is better)
Translates to: ITSYIIMFISIILGLAVWWYSIE*LMNAEL
Trigger: CAACTCAGCATTCATGAGCAACTCTATACTATACCA...CCAAACTGCTAGCCCTAGTATTATGGAGATGAACATGATGATGTAACTTGTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403579.1
ENST00000406900.5
CDS-3UTR CAA 90 bp ACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATTTAAACAACGCTTCACAGTCAACTTaGTATTTACAAATCAGGCAA +
Preference number: 5 (lower is better)
Translates to: TCGKDQCKLYHSDRYLNNASQST*YLQIRQ
Trigger: TTGCCTGATTTGTAAATACAAAGTTGACTGTGAAGC...GTTGTTTAAATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp CTCCCAATGGGAGACATGTACTTTCTGGCTGAATTACAATTAACATCTTATTACGCTTCACAGTCAACTTaGTATTTACAAATCAGGCAA +
Preference number: 5 (lower is better)
Translates to: LPMGDMYFLAELQLTSYYASQST*YLQIRQ
Trigger: TTGCCTGATTTGTAAATACAAAGTTGACTGTGAAGC...GTAATAAGATGTTAATTGTAATTCAGCCAGAAAGTACATGTCTCCCATTGGGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp ACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATTTAAACAACATAAGCCAATTCTTTTaGTGTTCGTGGAGGTTTTTC +
Preference number: 5 (lower is better)
Translates to: TCGKDQCKLYHSDRYLNNISQFF*CSWRFF
Trigger: GAAAAACCTCCACGAACACAAAAAGAATTGGCTTAT...GTTGTTTAAATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp CTCCCAATGGGAGACATGTACTTTCTGGCTGAATTACAATTAACATCTTATTACATAAGCCAATTCTTTTaGTGTTCGTGGAGGTTTTTC +
Preference number: 5 (lower is better)
Translates to: LPMGDMYFLAELQLTSYYISQFF*CSWRFF
Trigger: GAAAAACCTCCACGAACACAAAAAGAATTGGCTTAT...GTAATAAGATGTTAATTGTAATTCAGCCAGAAAGTACATGTCTCCCATTGGGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp CAGTTTAATACTTGTGGAAAAGATCAATGCAAGCTCTACCACAGTGATAGGTATGGAAAATGTAACGATTaGGTGGCAAAAACAGATACT +
Preference number: 5 (lower is better)
Translates to: QFNTCGKDQCKLYHSDRYGKCND*VAKTDT
Trigger: AGTATCTGTTTTTGCCACCAAATCGTTACATTTTCC...ATACCTATCACTGTGGTAGAGCTTGCATTGATCTTTTCCACAAGTATTAAACTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS-3UTR CAA 90 bp CTCCCAATGGGAGACATGTACTTTCTGGCTGAATTACAATTAACATCTTATTACGAAAAAGTATCAATTTaGGTCCTCCCAACTTTTGAC +
Preference number: 5 (lower is better)
Translates to: LPMGDMYFLAELQLTSYYEKVSI*VLPTFD
Trigger: GTCAAAAGTTGGGAGGACCAAAATTGATACTTTTTC...GTAATAAGATGTTAATTGTAATTCAGCCAGAAAGTACATGTCTCCCATTGGGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403579.1
CDS CAA 90 bp TCGCCCGGGCTCCGCTCGAGGCCGGGACCATCTCTCCGCGGCCTCTaGCGGAGCGGCTCCCCGGCGGGGGACGACGCGGCCTCCCTGTCG +
Preference number: 6 (lower is better)
Translates to: SPGLRSRPGPSLRGL*RSGSPAGDDAASLS
Trigger: CGACAGGGAGGCCGCGTCGTCCCCCGCCGGGGAGCCGCTCCGCAAGAGGCCGCGGAGAGATGGTCCCGGCCTCGAGCGGAGCCCGGGCGA
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000212015.11
CDS CAA 72 bp CTCCGCTCGAGGCCGGGACCATCTCTCCGCGGCCTCTaGCGGAGCGGCTCCCCGGCGGGGGACGACGCGGCC +
Preference number: 6 (lower is better)
Translates to: LRSRPGPSLRGL*RSGSPAGDDAA
Trigger: GGCCGCGTCGTCCCCCGCCGGGGAGCCGCTCCGCAAGAGGCCGCGGAGAGATGGTCCCGGCCTCGAGCGGAG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000212015.11
CDS TCA 72 bp CTGTCGGCCCCCGCCGCCGAGGGGGAGCCGCCGGGCTaGAGGGCGAGGGCCGCCTCGTCCGCCATCTTCCAA +
Preference number: 6 (lower is better)
Translates to: LSAPAAEGEPPG*RARAASSAIFQ
Trigger: TTGGAAGATGGCGGACGAGGCGGCCCTCGCCCTTCAGCCCGGCGGCTCCCCCTCGGCGGCGGGGGCCGACAG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000212015.11
CDS GCA 72 bp TCCGCTCGAGGCCGGGACCATCTCTCCGCGGCCTCTTaGGGAGCGGCTCCCCGGCGGGGGACGACGCGGCCT +
Preference number: 6 (lower is better)
Translates to: SARGRDHLSAAS*GAAPRRGTTRP
Trigger: AGGCCGCGTCGTCCCCCGCCGGGGAGCCGCTCCGCAAGAGGCCGCGGAGAGATGGTCCCGGCCTCGAGCGGA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000212015.11
CDS CAA 90 bp CGGCCCATTGTCTCCTTCCCCAGCCGCCGCAGTCGCCTGGGCCTCTaGCTCCCCGCCTGCCGCCGCCGCCTCTGCCTCCGCCTCCCGCCA +
Preference number: 6 (lower is better)
Translates to: RPIVSFPSRRSRLGL*LPACRRRLCLRLPP
Trigger: TGGCGGGAGGCGGAGGCAGAGGCGGCGGCGGCAGGCGGGGAGCAAGAGGCCCAGGCGACTGCGGCGGCTGGGGAAGGAGACAATGGGCCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000212015.11
CDS CAA 90 bp TCGGCCAGCGGTGGCTCCCGAGATGGGCCCTGCAGGCCCGGCCCATaGTCTCCTTCCCCAGCCGCCGCAGTCGCCTGGGCCTCTTGCTCC +
Preference number: 6 (lower is better)
Translates to: SASGGSRDGPCRPGP*SPSPAAAVAWASCS
Trigger: GGAGCAAGAGGCCCAGGCGACTGCGGCGGCTGGGGAAGGAGACAATGGGCCGGGCCTGCAGGGCCCATCTCGGGAGCCACCGCTGGCCGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000212015.11
CDS GCA 72 bp AAGTTGTCGGCCAGCGGTGGCTCCCGAGATGGGCCCTaGAGGCCCGGCCCATTGTCTCCTTCCCCAGCCGCC +
Preference number: 6 (lower is better)
Translates to: KLSASGGSRDGP*RPGPLSPSPAA
Trigger: GGCGGCTGGGGAAGGAGACAATGGGCCGGGCCTGCAGGGCCCATCTCGGGAGCCACCGCTGGCCGACAACTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000212015.11
CDS CCA 72 bp GTCGTACAAGTTGTCGGCCAGCGGTGGCTCCCGAGATaGGCCCTGCAGGCCCGGCCCATTGTCTCCTTCCCC +
Preference number: 6 (lower is better)
Translates to: VVQVVGQRWLPR*ALQARPIVSFP
Trigger: GGGGAAGGAGACAATGGGCCGGGCCTGCAGGGCCCATCTCGGGAGCCACCGCTGGCCGACAACTTGTACGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000212015.11
CDS CCA 72 bp GTCGTCGTCTTCGTCGTACAAGTTGTCGGCCAGCGGTaGCTCCCGAGATGGGCCCTGCAGGCCCGGCCCATT +
Preference number: 6 (lower is better)
Translates to: VVVFVVQVVGQR*LPRWALQARPI
Trigger: AATGGGCCGGGCCTGCAGGGCCCATCTCGGGAGCCACCGCTGGCCGACAACTTGTACGACGAAGACGACGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000212015.11
CDS CAA 72 bp TCCTCGCCCTCGTCGTCGTCGTCTTCGTCGTACAAGTaGTCGGCCAGCGGTGGCTCCCGAGATGGGCCCTGC +
Preference number: 6 (lower is better)
Translates to: SSPSSSSSSSYK*SASGGSRDGPC
Trigger: GCAGGGCCCATCTCGGGAGCCACCGCTGGCCGACAACTTGTACGACGAAGACGACGACGACGAGGGCGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000212015.11
CDS TCA 72 bp CCGTGGCCTTGGAGTCCAGTCACTAGAGCTTGCATGTaGGGCTCTATCCTCCTCATCACTTTCACAGGAATG +
Preference number: 6 (lower is better)
Translates to: PWPWSPVTRACM*GSILLITFTGM
Trigger: CATTCCTGTGAAAGTGATGAGGAGGATAGAGCCTCACATGCAAGCTCTAGTGACTGGACTCCAAGGCCACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000432464.5
ENST00000473922.1
ENST00000497639.5
CDS GCA 72 bp CTGATTACCATCAAGCCGCCTACTAATCTGCTCCTTTaGCACTCTATTAGGCCAGCATTTTCTCACTGTTCC +
Preference number: 6 (lower is better)
Translates to: LITIKPPTNLLL*HSIRPAFSHCS
Trigger: GGAACAGTGAGAAAATGCTGGCCTAATAGAGTGGCAAAGGAGCAGATTAGTAGGCGGCTTGATGGTAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS TCA 72 bp CTACAGCAAGGCGAGCATAAATACCATCCCTTGACCTaGAGTCAGGTATTCCACATGAAACAGACACCTATC +
Preference number: 6 (lower is better)
Translates to: LQQGEHKYHPLT*SQVFHMKQTPI
Trigger: GATAGGTGTCTGTTTCATGTGGAATACCTGACTTCAGGTCAAGGGATGGTATTTATGCTCGCCTTGCTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432464.5
ENST00000473922.1
CDS CCA 72 bp AATCTCTGGTTTCATGATAGCAAGCGGTTCATCAGCTaGGCACCTAGGACATCGAGGAACTACCTGATTAAA +
Preference number: 6 (lower is better)
Translates to: NLWFHDSKRFIS*APRTSRNYLIK
Trigger: TTTAATCAGGTAGTTCCTCGATGTCCTAGGTGCCCAGCTGATGAACCGCTTGCTATCATGAAACCAGAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS CCA 72 bp CTTTCATCCTCCATGGGTTCTTCTAAACTTGGACTCTaGCATGTCCCACTATCACTGTTACTGCCACAAGAA +
Preference number: 6 (lower is better)
Translates to: LSSSMGSSKLGL*HVPLSLLLPQE
Trigger: TTCTTGTGGCAGTAACAGTGATAGTGGGACATGCCAGAGTCCAAGTTTAGAAGAACCCATGGAGGATGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS CAA 90 bp GTCTGTTACTTCCTGTTTCACAGATATAGCTTCATTAATTGCCTCTaGATCATCTCCATCAGTCCCAAATCCAGCTCCTCCAGCTCTCTC +
Preference number: 6 (lower is better)
Translates to: VCYFLFHRYSFINCL*IISISPKSSSSSSL
Trigger: GAGAGAGCTGGAGGAGCTGGATTTGGGACTGATGGAGATGATCAAGAGGCAATTAATGAAGCTATATCTGTGAAACAGGAAGTAACAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS CAA 72 bp CAATTTCACTTTCATCCTCCATGGGTTCTTCTAAACTaGGACTCTGGCATGTCCCACTATCACTGTTACTGC +
Preference number: 6 (lower is better)
Translates to: QFHFHPPWVLLN*DSGMSHYHCYC
Trigger: GCAGTAACAGTGATAGTGGGACATGCCAGAGTCCAAGTTTAGAAGAACCCATGGAGGATGAAAGTGAAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS CAA 90 bp ACTTCATGGGGTATGGAACTTGGAATTAGTGCTACTGGTCTTACTTaGAGGGAAGACCCAATAACAATGAGGAGGTCAACTTCATCTTTG +
Preference number: 6 (lower is better)
Translates to: TSWGMELGISATGLT*REDPITMRRSTSSL
Trigger: CAAAGATGAAGTTGACCTCCTCATTGTTATTGGGTCTTCCCTCAAAGTAAGACCAGTAGCACTAATTCCAAGTTCCATACCCCATGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS CAA 90 bp AGAATTCTTCAATTTCACTTTCATCCTCCATGGGTTCTTCTAAACTaGGACTCTGGCATGTCCCACTATCACTGTTACTGCCACAAGAAC +
Preference number: 6 (lower is better)
Translates to: RILQFHFHPPWVLLN*DSGMSHYHCYCHKN
Trigger: GTTCTTGTGGCAGTAACAGTGATAGTGGGACATGCCAGAGTCCAAGTTTAGAAGAACCCATGGAGGATGAAAGTGAAATTGAAGAATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS CCA 72 bp CCAAAATTGTTTTCCTTCCACTGCACAGGCACATACTaGTATAGTATAGAGTTGCTCATGAATGCTGAGTTG +
Preference number: 6 (lower is better)
Translates to: PKLFSFHCTGTY*YSIELLMNAEL
Trigger: CAACTCAGCATTCATGAGCAACTCTATACTATACCAGTATGTGCCTGTGCAGTGGAAGGAAAACAATTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403579.1
ENST00000406900.5
CDS CAA 72 bp CTGAATATACCTCAGCGCCATGGAAAATGTAACGATTaGGTGGCAAAAACAGATACTGATTACCATCAAGCC +
Preference number: 6 (lower is better)
Translates to: LNIPQRHGKCND*VAKTDTDYHQA
Trigger: GGCTTGATGGTAATCAGTATCTGTTTTTGCCACCAAATCGTTACATTTTCCATGGCGCTGAGGTATATTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS GCA 72 bp CTTTTTGGTGGTTCTGAAAGGATATTAATAACAATCTaGCACAGTGTCATATCATCCAACTCAGGTGGAGGT +
Preference number: 6 (lower is better)
Translates to: LFGGSERILITI*HSVISSNSGGG
Trigger: ACCTCCACCTGAGTTGGATGATATGACACTGTGGCAGATTGTTATTAATATCCTTTCAGAACCACCAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000212015.11
ENST00000497639.5
CDS CCA 72 bp TCAGACACATCTAAATCATCATTACTCTTAGCTGCTTaGTCTAAAAGTGTGACAATCACTGAAGAATCTGGT +
Preference number: 6 (lower is better)
Translates to: SDTSKSSLLLAA*SKSVTITEESG
Trigger: ACCAGATTCTTCAGTGATTGTCACACTTTTAGACCAAGCAGCTAAGAGTAATGATGATTTAGATGTGTCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5
CDS CAA 72 bp TTAAAAATATCTCCTCGTACAGCTTCACAGTCAACTTaGTATTTACAAATCAGGCAAGATGCTGTTGCAAAG +
Preference number: 6 (lower is better)
Translates to: LKISPRTASQST*YLQIRQDAVAK
Trigger: CTTTGCAACAGCATCTTGCCTGATTTGTAAATACAAAGTTGACTGTGAAGCTGTACGAGGAGATATTTTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000212015.11
ENST00000403579.1
ENST00000406900.5
ENST00000432464.5