RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SIRPB2 (Homo sapiens)

Ensembl gene IDs: ENSG00000196209

Ensembl transcript IDs: ENST00000359801.8, ENST00000381630.2, ENST00000444444.2, ENST00000481731.5, ENST00000486775.5, ENST00000608073.1, ENST00000608747.1, ENST00000609796.1

Found 409 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCACAGGGAGGAGGCAGAGGCCTCAGGGTTAAAGGCAGGTGTGTCTaGCTCCTGGGCATGCACACTCTTCCCCATGTCAGGGCTTCTCAG +
Preference number: 1 (lower is better)
Translates to: AQGGGRGLRVKGRCV*LLGMHTLPHVRASQ
Trigger: CTGAGAAGCCCTGACATGGGGAAGAGTGTGCATGCCCAGGAGTCAGACACACCTGCCTTTAACCCTGAGGCCTCTGCCTCCTCCCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR CCA 90 bp AAGACTCTGAGTTGGATGTTGGAGGCCAAGAAGGATGTAGCGAGGTaGGGAAAGGGGCAGGGCGCACCAGAAAGGGCTGCAGCAGGGGCA +
Preference number: 1 (lower is better)
Translates to: KTLSWMLEAKKDVAR*GKGQGAPERAAAGA
Trigger: TGCCCCTGCTGCAGCCCTTTCTGGTGCGCCCTGCCCCTTTCCCCACCTCGCTACATCCTTCTTGGCCTCCAACATCCAACTCAGAGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR CCA 90 bp GAGGAGGCAGAGGCCTCAGGGTTAAAGGCAGGTGTGTCTGACTCCTaGGCATGCACACTCTTCCCCATGTCAGGGCTTCTCAGTCCACTA +
Preference number: 1 (lower is better)
Translates to: EEAEASGLKAGVSDS*ACTLFPMSGLLSPL
Trigger: TAGTGGACTGAGAAGCCCTGACATGGGGAAGAGTGTGCATGCCCAGGAGTCAGACACACCTGCCTTTAACCCTGAGGCCTCTGCCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR CCA 90 bp CAGTTCAGAAAGACAGTGTCTCCAGTGGTCCCCAACACCAATTCCTaGGGCTGGATGATCCACAGGTCTGGTTCAGGGTCCCCAGCTCCC +
Preference number: 1 (lower is better)
Translates to: QFRKTVSPVVPNTNS*GWMIHRSGSGSPAP
Trigger: GGGAGCTGGGGACCCTGAACCAGACCTGTGGATCATCCAGCCCCAGGAATTGGTGTTGGGGACCACTGGAGACACTGTCTTTCTGAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608073.1
3UTR CCA 90 bp GGAAGGAGTGGGGAGAAAGGTGTAGATGGAGGGGCACAGATGGTCTaGCTGGTTGAGTTCAGAGATTCTTACAGACATCTCCTGGGAAGA +
Preference number: 1 (lower is better)
Translates to: GRSGEKGVDGGAQMV*LVEFRDSYRHLLGR
Trigger: TCTTCCCAGGAGATGTCTGTAAGAATCTCTGAACTCAACCAGCCAGACCATCTGTGCCCCTCCATCTACACCTTTCTCCCCACTCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR TCA 90 bp TGGGGAGAAAGGTGTAGATGGAGGGGCACAGATGGTCTGGCTGGTTaGGTTCAGAGATTCTTACAGACATCTCCTGGGAAGAAGACTCTG +
Preference number: 1 (lower is better)
Translates to: WGERCRWRGTDGLAG*VQRFLQTSPGKKTL
Trigger: CAGAGTCTTCTTCCCAGGAGATGTCTGTAAGAATCTCTGAACTCAACCAGCCAGACCATCTGTGCCCCTCCATCTACACCTTTCTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR GCA 90 bp TATGTAGTTCAGGCGTTTACGGGGTCTAATACAGGCCAGGCATTCTaGTTGGTGTTTGCTGTTCTTGTGCAAGTCAAGCACGCTCCTGCC +
Preference number: 1 (lower is better)
Translates to: YVVQAFTGSNTGQAF*LVFAVLVQVKHAPA
Trigger: GGCAGGAGCGTGCTTGACTTGCACAAGAACAGCAAACACCAAGCAGAATGCCTGGCCTGTATTAGACCCCGTAAACGCCTGAACTACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
3UTR CCA 90 bp GTTCAGAGATTCTTACAGACATCTCCTGGGAAGAAGACTCTGAGTTaGATGTTGGAGGCCAAGAAGGATGTAGCGAGGTGGGGAAAGGGG +
Preference number: 1 (lower is better)
Translates to: VQRFLQTSPGKKTLS*MLEAKKDVARWGKG
Trigger: CCCCTTTCCCCACCTCGCTACATCCTTCTTGGCCTCCAACATCCAACTCAGAGTCTTCTTCCCAGGAGATGTCTGTAAGAATCTCTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR GCA 90 bp ATTCTGCTTGGTGTTTGCTGTTCTTGTGCAAGTCAAGCACGCTCCTaGCTCAGGACCTTTGCATTCGCTGTTCCTTGTACTTTTCAGCTC +
Preference number: 1 (lower is better)
Translates to: ILLGVCCSCASQARS*LRTFAFAVPCTFQL
Trigger: GAGCTGAAAAGTACAAGGAACAGCGAATGCAAAGGTCCTGAGGCAGGAGCGTGCTTGACTTGCACAAGAACAGCAAACACCAAGCAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
3UTR GCA 90 bp GAGAACTGGAATTTGAACCTGCACAGCCAGATTTCCGAGACTGTGTaGTTCATCTCTGCCATGTATGTAGTTCAGGCGTTTACGGGGTCT +
Preference number: 1 (lower is better)
Translates to: ENWNLNLHSQISETV*FISAMYVVQAFTGS
Trigger: AGACCCCGTAAACGCCTGAACTACATACATGGCAGAGATGAAGCACACAGTCTCGGAAATCTGGCTGTGCAGGTTCAAATTCCAGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
3UTR CCA 90 bp AGGGCAGGTGAGAGGCTGTCTGTATGCTGCTGTGGTGGAGATAACTaGTTATCCCCTGATATCTGCCATCTGGTTTCTCTAGTGAAAACT +
Preference number: 1 (lower is better)
Translates to: RAGERLSVCCCGGDN*LSPDICHLVSLVKT
Trigger: AGTTTTCACTAGAGAAACCAGATGGCAGATATCAGGGGATAACCAGTTATCTCCACCACAGCAGCATACAGACAGCCTCTCACCTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR TCA 90 bp ATCCTGGGTCTCAATACCAGGGAGTCTCTGTATTGCTTGGCCTGCTaGTGGTCAACTTTCTGGTTGATTTCCACTGGTTTAAGCCACTGT +
Preference number: 1 (lower is better)
Translates to: ILGLNTRESLYCLAC*WSTFWLISTGLSHC
Trigger: ACAGTGGCTTAAACCAGTGGAAATCAACCAGAAAGTTGACCATCAGCAGGCCAAGCAATACAGAGACTCCCTGGTATTGAGACCCAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR TCA 90 bp AAGATTCCCGCACTTCCCCAAGAGATAAGTAGGAGAACTGGAATTTaGACCTGCACAGCCAGATTTCCGAGACTGTGTGCTTCATCTCTG +
Preference number: 1 (lower is better)
Translates to: KIPALPQEISRRTGI*TCTARFPRLCASSL
Trigger: CAGAGATGAAGCACACAGTCTCGGAAATCTGGCTGTGCAGGTTCAAATTCCAGTTCTCCTACTTATCTCTTGGGGAAGTGCGGGAATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481731.5
3UTR CCA 90 bp AGATGGTCTGGCTGGTTGAGTTCAGAGATTCTTACAGACATCTCCTaGGAAGAAGACTCTGAGTTGGATGTTGGAGGCCAAGAAGGATGT +
Preference number: 1 (lower is better)
Translates to: RWSGWLSSEILTDIS*EEDSELDVGGQEGC
Trigger: ACATCCTTCTTGGCCTCCAACATCCAACTCAGAGTCTTCTTCCCAGGAGATGTCTGTAAGAATCTCTGAACTCAACCAGCCAGACCATCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR TCA 90 bp GAGAGAAACAAACTCACCCAAGAGATAAGTAGGAGAACTGGAATTTaGACCTGCACAGCCAGATTTCCGAGACTGTGTGCTTCATCTCTG +
Preference number: 1 (lower is better)
Translates to: ERNKLTQEISRRTGI*TCTARFPRLCASSL
Trigger: CAGAGATGAAGCACACAGTCTCGGAAATCTGGCTGTGCAGGTTCAAATTCCAGTTCTCCTACTTATCTCTTGGGTGAGTTTGTTTCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486775.5
3UTR CCA 90 bp GTATTGCTTGGCCTGCTGATGGTCAACTTTCTGGTTGATTTCCACTaGTTTAAGCCACTGTTATTTAAGAGCTTTGTTATAGTTGCTGAA +
Preference number: 1 (lower is better)
Translates to: VLLGLLMVNFLVDFH*FKPLLFKSFVIVAE
Trigger: TTCAGCAACTATAACAAAGCTCTTAAATAACAGTGGCTTAAACCAGTGGAAATCAACCAGAAAGTTGACCATCAGCAGGCCAAGCAATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR-3UTR CCA 90 bp GCCTCTGCCTCCCAGTTCAAGCGGTTCTCCTGCCCCATCCTCCCAAGTAGCTGGAAGGATGTAGCGAGGTaGGGAAAGGGGCAGGGCGCA +
Preference number: 2 (lower is better)
Translates to: ASASQFKRFSCPILPSSWKDVAR*GKGQGA
Trigger: TGCGCCCTGCCCCTTTCCCCACCTCGCTACATCCTT...CCAGCTACTTGGGAGGATGGGGCAGGAGAACCGCTTGAACTGGGAGGCAGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR-3UTR GCA 90 bp GCCTCTGCCTCCCAGTTCAAGCGGTTCTCCTGCCCCATCCTCCCAAGTAGCTGGCCTGCTCCCCTTTCCTaGCCTCTTTTCCAGTCTGGC +
Preference number: 2 (lower is better)
Translates to: ASASQFKRFSCPILPSSWPAPLS*PLFQSG
Trigger: GCCAGACTGGAAAAGAGGGCAGGAAAGGGGAGCAGG...CCAGCTACTTGGGAGGATGGGGCAGGAGAACCGCTTGAACTGGGAGGCAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR-3UTR TCA 90 bp GCCTCTGCCTCCCAGTTCAAGCGGTTCTCCTGCCCCATCCTCCCAAGTAGCTGGGATGGTCTGGCTGGTTaGGTTCAGAGATTCTTACAG +
Preference number: 2 (lower is better)
Translates to: ASASQFKRFSCPILPSSWDGLAG*VQRFLQ
Trigger: CTGTAAGAATCTCTGAACTCAACCAGCCAGACCATC...CCAGCTACTTGGGAGGATGGGGCAGGAGAACCGCTTGAACTGGGAGGCAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR-3UTR GCA 90 bp GAGATAAGTGAGGTGGCCAAGTTCCTGACTGTGCACTTAAAGGGGAGGGTCCTGCGCACCAGAAAGGGCTaGAGCAGGGGCAAGGGTGTT +
Preference number: 2 (lower is better)
Translates to: EISEVAKFLTVHLKGRVLRTRKG*SRGKGV
Trigger: AACACCCTTGCCCCTGCTGCAGCCCTTTCTGGTGCG...CAGGACCCTCCCCTTTAAGTGCACAGTCAGGAACTTGGCCACCTCACTTATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR-3UTR GCA 90 bp GCCTCAGGGTTAAAGGCAGGTGTGTCTGACTCCTGGGCATGCACACTCTTCCCCGATAGTGGGAAGAAGTaGTGGCTAGCTAGCTGGGCA +
Preference number: 2 (lower is better)
Translates to: ASGLKAGVSDSWACTLFPDSGKK*WLASWA
Trigger: TGCCCAGCTAGCTAGCCAGCACTTCTTCCCACTATC...GGGGAAGAGTGTGCATGCCCAGGAGTCAGACACACCTGCCTTTAACCCTGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR-3UTR CCA 90 bp GCCTCTGCCTCCCAGTTCAAGCGGTTCTCCTGCCCCATCCTCCCAAGTAGCTGGGAGATCAGTGAATCCTaGGTCTCAATACCAGGGAGT +
Preference number: 2 (lower is better)
Translates to: ASASQFKRFSCPILPSSWEISES*VSIPGS
Trigger: ACTCCCTGGTATTGAGACCCAGGATTCACTGATCTC...CCAGCTACTTGGGAGGATGGGGCAGGAGAACCGCTTGAACTGGGAGGCAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR-3UTR TCA 90 bp CCCAACACCAATTCCTGGGGCTGGATGATCCACAGGTCTGGTTCAGGGTCCCCATCCCTTCACAAGCACTaGGGTGCCTTCATCCGATTT +
Preference number: 2 (lower is better)
Translates to: PNTNSWGWMIHRSGSGSPSLHKH*GAFIRF
Trigger: AAATCGGATGAAGGCACCTCAGTGCTTGTGAAGGGA...TGGGGACCCTGAACCAGACCTGTGGATCATCCAGCCCCAGGAATTGGTGTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608073.1
3UTR-3UTR CCA 90 bp GAATCCTGGGTCTCAATACCAGGGAGTCTCTGTATTGCTTGGCCTGCTGATGGTGTTTGTCATGAGGCCTaGGGGCACCTAGAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: ESWVSIPGSLCIAWPADGVCHEA*GHLEAG
Trigger: CCCAGCCTCTAGGTGCCCCCAGGCCTCATGACAAAC...ACCATCAGCAGGCCAAGCAATACAGAGACTCCCTGGTATTGAGACCCAGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR-3UTR CCA 90 bp GAGATAAGTGAGGTGGCCAAGTTCCTGACTGTGCACTTAAAGGGGAGGGTCCTGCCCTCTTTTCCAGTCTaGCTGCCTAGAAGGTGGACC +
Preference number: 2 (lower is better)
Translates to: EISEVAKFLTVHLKGRVLPSFPV*LPRRWT
Trigger: GGTCCACCTTCTAGGCAGCCAGACTGGAAAAGAGGG...CAGGACCCTCCCCTTTAAGTGCACAGTCAGGAACTTGGCCACCTCACTTATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR CAA 90 bp AAGTCAAGCACGCTCCTGCCTCAGGACCTTTGCATTCGCTGTTCCTaGTACTTTTCAGCTCTTCCCCTGGGTATCTGCAGGGCTCTCTTC +
Preference number: 2 (lower is better)
Translates to: KSSTLLPQDLCIRCS*YFSALPLGICRALF
Trigger: GAAGAGAGCCCTGCAGATACCCAGGGGAAGAGCTGAAAAGTACAAGGAACAGCGAATGCAAAGGTCCTGAGGCAGGAGCGTGCTTGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
3UTR-3UTR GCA 90 bp TATGTAGTTCAGGCGTTTACGGGGTCTAATACAGGCCAGGCATTCTGCTTGGTGCTTCCCCTGGGTATCTaGAGGGCTCTCTTCCTCACC +
Preference number: 2 (lower is better)
Translates to: YVVQAFTGSNTGQAFCLVLPLGI*RALFLT
Trigger: GGTGAGGAAGAGAGCCCTGCAGATACCCAGGGGAAG...CACCAAGCAGAATGCCTGGCCTGTATTAGACCCCGTAAACGCCTGAACTACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
3UTR-3UTR CCA 90 bp ACAGACATCTCCTGGGAAGAAGACTCTGAGTTGGATGTTGGAGGCCAAGAAGGACTGGAGGTAGGGAAATaGTTGAGGAGCCCTGGCTCC +
Preference number: 2 (lower is better)
Translates to: TDISWEEDSELDVGGQEGLEVGK*LRSPGS
Trigger: GGAGCCAGGGCTCCTCAACCATTTCCCTACCTCCAG...TCCTTCTTGGCCTCCAACATCCAACTCAGAGTCTTCTTCCCAGGAGATGTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR-3UTR TCA 90 bp GCATTCGCTGTTCCTTGTACTTTTCAGCTCTTCCCCTGGGTATCTGCAGGGCTCGGAGGAGGTAAGCTCTaGGAGAGCAGACTTCTGTTT +
Preference number: 2 (lower is better)
Translates to: AFAVPCTFQLFPWVSAGLGGGKL*ESRLLF
Trigger: AAACAGAAGTCTGCTCTCTCAGAGCTTACCTCCTCC...GAGCCCTGCAGATACCCAGGGGAAGAGCTGAAAAGTACAAGGAACAGCGAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
3UTR-3UTR GCA 90 bp GCCTCAGGGTTAAAGGCAGGTGTGTCTGACTCCTGGGCATGCACACTCTTCCCCTTATCCCCTGATATCTaGCATCTGGTTTCTCTAGTG +
Preference number: 2 (lower is better)
Translates to: ASGLKAGVSDSWACTLFPLSPDI*HLVSLV
Trigger: CACTAGAGAAACCAGATGGCAGATATCAGGGGATAA...GGGGAAGAGTGTGCATGCCCAGGAGTCAGACACACCTGCCTTTAACCCTGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR-3UTR CCA 90 bp GAATCCTGGGTCTCAATACCAGGGAGTCTCTGTATTGCTTGGCCTGCTGATGGTATGGAGGGGCACAGATaGTCTGGCTGGTTGAGTTCA +
Preference number: 2 (lower is better)
Translates to: ESWVSIPGSLCIAWPADGMEGHR*SGWLSS
Trigger: TGAACTCAACCAGCCAGACCATCTGTGCCCCTCCAT...ACCATCAGCAGGCCAAGCAATACAGAGACTCCCTGGTATTGAGACCCAGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR-3UTR GCA 90 bp TTCGCTGTTCCTTGTACTTTTCAGCTCTTCCCCTGGGTATCTGCAGGGCTCTCTGGAGAACCACCTCCATaGTTTCCTGCTGTTTCAGCT +
Preference number: 2 (lower is better)
Translates to: FAVPCTFQLFPWVSAGLSGEPPP*FPAVSA
Trigger: AGCTGAAACAGCAGGAAAGCATGGAGGTGGTTCTCC...AGAGAGCCCTGCAGATACCCAGGGGAAGAGCTGAAAAGTACAAGGAACAGCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
3UTR-3UTR CCA 90 bp AGAGGCTGTCTGTATGCTGCTGTGGTGGAGATAACTGGTTATCCCCTGATATCTATGGTTGAGGAGCCCTaGCTCCTCTCCAACTCAGAG +
Preference number: 2 (lower is better)
Translates to: RGCLYAAVVEITGYPLISMVEEP*LLSNSE
Trigger: CTCTGAGTTGGAGAGGAGCCAGGGCTCCTCAACCAT...AGATATCAGGGGATAACCAGTTATCTCCACCACAGCAGCATACAGACAGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR CAA 90 bp AGTTCAGAGATTCTTACAGACATCTCCTGGGAAGAAGACTCTGAGTaGGATGTTGGAGGCCAAGAAGGATGTAGCGAGGTGGGGAAAGGG +
Preference number: 2 (lower is better)
Translates to: SSEILTDISWEEDSE*DVGGQEGCSEVGKG
Trigger: CCCTTTCCCCACCTCGCTACATCCTTCTTGGCCTCCAACATCCAACTCAGAGTCTTCTTCCCAGGAGATGTCTGTAAGAATCTCTGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR CAA 90 bp TTTGCTGTTCTTGTGCAAGTCAAGCACGCTCCTGCCTCAGGACCTTaGCATTCGCTGTTCCTTGTACTTTTCAGCTCTTCCCCTGGGTAT +
Preference number: 2 (lower is better)
Translates to: FAVLVQVKHAPASGP*HSLFLVLFSSSPGY
Trigger: ATACCCAGGGGAAGAGCTGAAAAGTACAAGGAACAGCGAATGCAAAGGTCCTGAGGCAGGAGCGTGCTTGACTTGCACAAGAACAGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
3UTR-3UTR TCA 90 bp TGTGGTGGAGATAACTGGTTATCCCCTGATATCTGCCATCTGGTTTCTCTAGTGTCTAGGAGTTTGTCATaGGGCCTGGGGGCACCTAGA +
Preference number: 2 (lower is better)
Translates to: CGGDNWLSPDICHLVSLVSRSLS*GLGAPR
Trigger: TCTAGGTGCCCCCAGGCCTCATGACAAACTCCTAGA...CACTAGAGAAACCAGATGGCAGATATCAGGGGATAACCAGTTATCTCCACCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR-3UTR GCA 90 bp TTCATCTCTGCCATGTATGTAGTTCAGGCGTTTACGGGGTCTAATACAGGCCAGACCTCCATGCTTTCCTaGTGTTTCAGCTTCCCGTGG +
Preference number: 2 (lower is better)
Translates to: FISAMYVVQAFTGSNTGQTSMLS*CFSFPW
Trigger: CCACGGGAAGCTGAAACAGCAGGAAAGCATGGAGGT...CTGGCCTGTATTAGACCCCGTAAACGCCTGAACTACATACATGGCAGAGATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
3UTR-3UTR GCA 90 bp AGGGTTACTTGCTCATTGTCTGTCTTCTCTCGGGAGGAGGTAAGCTCTGAGAGAGGAGAACCACCTCCATaGTTTCCTGCTGTTTCAGCT +
Preference number: 2 (lower is better)
Translates to: RVTCSLSVFSREEVSSERGEPPP*FPAVSA
Trigger: AGCTGAAACAGCAGGAAAGCATGGAGGTGGTTCTCC...TCTCTCAGAGCTTACCTCCTCCCGAGAGAAGACAGACAATGAGCAAGTAACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
3UTR-3UTR GCA 90 bp TTGCTGTTCTTGTGCAAGTCAAGCACGCTCCTGCCTCAGGACCTTTGCATTCGCCACCCTAGGGTTACTTaGTCATTGTCTGTCTTCTCT +
Preference number: 2 (lower is better)
Translates to: LLFLCKSSTLLPQDLCIRHPRVT*SLSVFS
Trigger: AGAGAAGACAGACAATGAGCAAGTAACCCTAGGGTG...GCGAATGCAAAGGTCCTGAGGCAGGAGCGTGCTTGACTTGCACAAGAACAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
3UTR-3UTR CCA 90 bp GAGATAAGTGAGGTGGCCAAGTTCCTGACTGTGCACTTAAAGGGGAGGGTCCTGCTTACAGACATCTCCTaGGAAGAAGACTCTGAGTTG +
Preference number: 2 (lower is better)
Translates to: EISEVAKFLTVHLKGRVLLTDIS*EEDSEL
Trigger: CAACTCAGAGTCTTCTTCCCAGGAGATGTCTGTAAG...CAGGACCCTCCCCTTTAAGTGCACAGTCAGGAACTTGGCCACCTCACTTATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR-3UTR TCA 90 bp TTCATCTCTGCCATGTATGTAGTTCAGGCGTTTACGGGGTCTAATACAGGCCAGGGAGGAGGTAAGCTCTaGGAGAGCAGACTTCTGTTT +
Preference number: 2 (lower is better)
Translates to: FISAMYVVQAFTGSNTGQGGGKL*ESRLLF
Trigger: AAACAGAAGTCTGCTCTCTCAGAGCTTACCTCCTCC...CTGGCCTGTATTAGACCCCGTAAACGCCTGAACTACATACATGGCAGAGATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
3UTR-3UTR TCA 90 bp ATGTCACTTTATCAGGAGGCCTCTTCTGTCCACCCTAGGGTTACTTGCTCATTGCGTTTCAGGATTCAATaGGGGTGGCTCCAGTTAGTG +
Preference number: 2 (lower is better)
Translates to: MSLYQEASSVHPRVTCSLRFRIQ*GWLQLV
Trigger: CACTAACTGGAGCCACCCTCATTGAATCCTGAAACG...CAATGAGCAAGTAACCCTAGGGTGGACAGAAGAGGCCTCCTGATAAAGTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481731.5
3UTR-3UTR GCA 90 bp CCCCAGCACCAGCTGCTGCTGGCTCGTTCTTTCAGAGTGTACTGTCTCTTTAAATGTGTGCTTCATCTCTaGCATGTATGTAGTTCAGGC +
Preference number: 2 (lower is better)
Translates to: PQHQLLLARSFRVYCLFKCVLHL*HVCSSG
Trigger: GCCTGAACTACATACATGGCAGAGATGAAGCACACA...TTTAAAGAGACAGTACACTCTGAAAGAACGAGCCAGCAGCAGCTGGTGCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481731.5
3UTR-3UTR CCA 90 bp TGTGGTGGAGATAACTGGTTATCCCCTGATATCTGCCATCTGGTTTCTCTAGTGGGGGCACAGATGGTCTaGCTGGTTGAGTTCAGAGAT +
Preference number: 2 (lower is better)
Translates to: CGGDNWLSPDICHLVSLVGAQMV*LVEFRD
Trigger: ATCTCTGAACTCAACCAGCCAGACCATCTGTGCCCC...CACTAGAGAAACCAGATGGCAGATATCAGGGGATAACCAGTTATCTCCACCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR CAA 90 bp ATGAGATCAGTGAATCCTGGGTCTCAATACCAGGGAGTCTCTGTATaGCTTGGCCTGCTGATGGTCAACTTTCTGGTTGATTTCCACTGG +
Preference number: 2 (lower is better)
Translates to: MRSVNPGSQYQGVSV*LGLLMVNFLVDFHW
Trigger: CCAGTGGAAATCAACCAGAAAGTTGACCATCAGCAGGCCAAGCAATACAGAGACTCCCTGGTATTGAGACCCAGGATTCACTGATCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR-3UTR GCA 90 bp TATGTAGTTCAGGCGTTTACGGGGTCTAATACAGGCCAGGCATTCTGCTTGGTGCACCCTAGGGTTACTTaGTCATTGTCTGTCTTCTCT +
Preference number: 2 (lower is better)
Translates to: YVVQAFTGSNTGQAFCLVHPRVT*SLSVFS
Trigger: AGAGAAGACAGACAATGAGCAAGTAACCCTAGGGTG...CACCAAGCAGAATGCCTGGCCTGTATTAGACCCCGTAAACGCCTGAACTACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
3UTR CAA 90 bp TATCTGCCATCTGGTTTCTCTAGTGAAAACTTGCAGCTGGGCGCATaGCTGCCAGAAATAAAGACTACATCTCCCAGTGTTTCTTGCAGC +
Preference number: 2 (lower is better)
Translates to: YLPSGFSSENLQLGA*LPEIKTTSPSVSCS
Trigger: GCTGCAAGAAACACTGGGAGATGTAGTCTTTATTTCTGGCAGCAATGCGCCCAGCTGCAAGTTTTCACTAGAGAAACCAGATGGCAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR-3UTR CCA 90 bp AGAGGCTGTCTGTATGCTGCTGTGGTGGAGATAACTGGTTATCCCCTGATATCTAGTCTCTGTATTGCTTaGCCTGCTGATGGTCAACTT +
Preference number: 2 (lower is better)
Translates to: RGCLYAAVVEITGYPLISSLCIA*PADGQL
Trigger: AAGTTGACCATCAGCAGGCCAAGCAATACAGAGACT...AGATATCAGGGGATAACCAGTTATCTCCACCACAGCAGCATACAGACAGCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR-3UTR CCA 90 bp TGTGGTGGAGATAACTGGTTATCCCCTGATATCTGCCATCTGGTTTCTCTAGTGGGGAATTTCACTAGGTaGACCAAAACCAGATGTAGG +
Preference number: 2 (lower is better)
Translates to: CGGDNWLSPDICHLVSLVGNFTR*TKTRCR
Trigger: CCTACATCTGGTTTTGGTCCACCTAGTGAAATTCCC...CACTAGAGAAACCAGATGGCAGATATCAGGGGATAACCAGTTATCTCCACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR-3UTR GCA 90 bp CAGATTTCCGAGACTGTGTGCTTCATCTCTGCCATGTATGTAGTTCAGGCGTTTCCTCCTTCAGGTGTCTaGTCAAATGTCACTTTATCA +
Preference number: 2 (lower is better)
Translates to: QISETVCFISAMYVVQAFPPSGV*SNVTLS
Trigger: TGATAAAGTGACATTTGAGCAGACACCTGAAGGAGG...AAACGCCTGAACTACATACATGGCAGAGATGAAGCACACAGTCTCGGAAATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
3UTR-3UTR CCA 90 bp AGAGGCTGTCTGTATGCTGCTGTGGTGGAGATAACTGGTTATCCCCTGATATCTCTGGTTGATTTCCACTaGTTTAAGCCACTGTTATTT +
Preference number: 2 (lower is better)
Translates to: RGCLYAAVVEITGYPLISLVDFH*FKPLLF
Trigger: AAATAACAGTGGCTTAAACCAGTGGAAATCAACCAG...AGATATCAGGGGATAACCAGTTATCTCCACCACAGCAGCATACAGACAGCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR-3UTR CAA 90 bp GCCTCTGCCTCCCAGTTCAAGCGGTTCTCCTGCCCCATCCTCCCAAGTAGCTGGCAGGGAGTCTCTGTATaGCTTGGCCTGCTGATGGTC +
Preference number: 3 (lower is better)
Translates to: ASASQFKRFSCPILPSSWQGVSV*LGLLMV
Trigger: GACCATCAGCAGGCCAAGCAATACAGAGACTCCCTG...CCAGCTACTTGGGAGGATGGGGCAGGAGAACCGCTTGAACTGGGAGGCAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR TCA 72 bp GGAGGCAGAGGCCTCAGGGTTAAAGGCAGGTGTGTCTaGCTCCTGGGCATGCACACTCTTCCCCATGTCAGG +
Preference number: 3 (lower is better)
Translates to: GGRGLRVKGRCV*LLGMHTLPHVR
Trigger: CCTGACATGGGGAAGAGTGTGCATGCCCAGGAGTCAGACACACCTGCCTTTAACCCTGAGGCCTCTGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR GCA 72 bp ATGAGGGTGGCTCCAGTTAGTGGAGAACCACCTCCATaGTTTCCTGCTGTTTCAGCTTCCCGTGGCCGCTGT +
Preference number: 3 (lower is better)
Translates to: MRVAPVSGEPPP*FPAVSASRGRC
Trigger: ACAGCGGCCACGGGAAGCTGAAACAGCAGGAAAGCATGGAGGTGGTTCTCCACTAACTGGAGCCACCCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481731.5
3UTR CCA 72 bp ACCAGATGTAGGGATCTAGGAGTTTGTCATGAGGCCTaGGGGCACCTAGAGGCTGGGACTGGAGGTAGGGAA +
Preference number: 3 (lower is better)
Translates to: TRCRDLGVCHEA*GHLEAGTGGRE
Trigger: TTCCCTACCTCCAGTCCCAGCCTCTAGGTGCCCCCAGGCCTCATGACAAACTCCTAGATCCCTACATCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR CCA 72 bp AAGACAGTGTCTCCAGTGGTCCCCAACACCAATTCCTaGGGCTGGATGATCCACAGGTCTGGTTCAGGGTCC +
Preference number: 3 (lower is better)
Translates to: KTVSPVVPNTNS*GWMIHRSGSGS
Trigger: GGACCCTGAACCAGACCTGTGGATCATCCAGCCCCAGGAATTGGTGTTGGGGACCACTGGAGACACTGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608073.1
3UTR GCA 72 bp CCTGCTCCCCTTTCCTGCCCTCTTTTCCAGTCTGGCTaGCTAGAAGGTGGACCTGGTAGCAATGAGATCAGT +
Preference number: 3 (lower is better)
Translates to: PAPLSCPLFQSG*LEGGPGSNEIS
Trigger: ACTGATCTCATTGCTACCAGGTCCACCTTCTAGGCAGCCAGACTGGAAAAGAGGGCAGGAAAGGGGAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR GCA 72 bp ATCACTCATCTTGGGAACTACTGCCCCACATCATGCTaGCCCAGGGGAGGTGATAGTGGGAAGAAGTGCTGG +
Preference number: 3 (lower is better)
Translates to: ITHLGNYCPTSC*PRGGDSGKKCW
Trigger: CCAGCACTTCTTCCCACTATCACCTCCCCTGGGGCAGCATGATGTGGGGCAGTAGTTCCCAAGATGAGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR GCA 72 bp CAGGCCAGGCATTCTGCTTGGTGTTTGCTGTTCTTGTaGAAGTCAAGCACGCTCCTGCCTCAGGACCTTTGC +
Preference number: 3 (lower is better)
Translates to: QARHSAWCLLFL*KSSTLLPQDLC
Trigger: GCAAAGGTCCTGAGGCAGGAGCGTGCTTGACTTGCACAAGAACAGCAAACACCAAGCAGAATGCCTGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
3UTR GCA 72 bp GTGTCCCACAGGGCAGGTGAGAGGCTGTCTGTATGCTaGTGTGGTGGAGATAACTGGTTATCCCCTGATATC +
Preference number: 3 (lower is better)
Translates to: VSHRAGERLSVC*CGGDNWLSPDI
Trigger: GATATCAGGGGATAACCAGTTATCTCCACCACAGCAGCATACAGACAGCCTCTCACCTGCCCTGTGGGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR GCA 72 bp TATCAGGAGGCCTCTTCTGTCCACCCTAGGGTTACTTaGTCATTGTCTGTCTTCTCTCGGGAGGAGGTAAGC +
Preference number: 3 (lower is better)
Translates to: YQEASSVHPRVT*SLSVFSREEVS
Trigger: GCTTACCTCCTCCCGAGAGAAGACAGACAATGAGCAAGTAACCCTAGGGTGGACAGAAGAGGCCTCCTGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
3UTR-3UTR CAA 90 bp GCCTCAGGGTTAAAGGCAGGTGTGTCTGACTCCTGGGCATGCACACTCTTCCCCTGGTCAACTTTCTGGTaGATTTCCACTGGTTTAAGC +
Preference number: 3 (lower is better)
Translates to: ASGLKAGVSDSWACTLFPWSTFW*ISTGLS
Trigger: GCTTAAACCAGTGGAAATCAACCAGAAAGTTGACCA...GGGGAAGAGTGTGCATGCCCAGGAGTCAGACACACCTGCCTTTAACCCTGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR TCA 72 bp AGGTGTAGATGGAGGGGCACAGATGGTCTGGCTGGTTaGGTTCAGAGATTCTTACAGACATCTCCTGGGAAG +
Preference number: 3 (lower is better)
Translates to: RCRWRGTDGLAG*VQRFLQTSPGK
Trigger: CTTCCCAGGAGATGTCTGTAAGAATCTCTGAACTCAACCAGCCAGACCATCTGTGCCCCTCCATCTACACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR GCA 72 bp GGTGTTTGCTGTTCTTGTGCAAGTCAAGCACGCTCCTaGCTCAGGACCTTTGCATTCGCTGTTCCTTGTACT +
Preference number: 3 (lower is better)
Translates to: GVCCSCASQARS*LRTFAFAVPCT
Trigger: AGTACAAGGAACAGCGAATGCAAAGGTCCTGAGGCAGGAGCGTGCTTGACTTGCACAAGAACAGCAAACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
3UTR GCA 72 bp CAGGCGTTTACGGGGTCTAATACAGGCCAGGCATTCTaGTTGGTGTTTGCTGTTCTTGTGCAAGTCAAGCAC +
Preference number: 3 (lower is better)
Translates to: QAFTGSNTGQAF*LVFAVLVQVKH
Trigger: GTGCTTGACTTGCACAAGAACAGCAAACACCAAGCAGAATGCCTGGCCTGTATTAGACCCCGTAAACGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
3UTR TCA 72 bp GACCATGTGACCACATTCCAGCCAAGTAGAGATAAGTaGGGTGGCCAAGTTCCTGACTGTGCACTTAAAGGG +
Preference number: 3 (lower is better)
Translates to: DHVTTFQPSRDK*GGQVPDCALKG
Trigger: CCCTTTAAGTGCACAGTCAGGAACTTGGCCACCTCACTTATCTCTACTTGGCTGGAATGTGGTCACATGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR CCA 72 bp TTCTTACAGACATCTCCTGGGAAGAAGACTCTGAGTTaGATGTTGGAGGCCAAGAAGGATGTAGCGAGGTGG +
Preference number: 3 (lower is better)
Translates to: FLQTSPGKKTLS*MLEAKKDVARW
Trigger: CCACCTCGCTACATCCTTCTTGGCCTCCAACATCCAACTCAGAGTCTTCTTCCCAGGAGATGTCTGTAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR-3UTR CAA 90 bp AGAGGCTGTCTGTATGCTGCTGTGGTGGAGATAACTGGTTATCCCCTGATATCTATCTCCCAGTGTTTCTaGCAGCTAGGTGTGACCATG +
Preference number: 3 (lower is better)
Translates to: RGCLYAAVVEITGYPLISISQCF*QLGVTM
Trigger: CATGGTCACACCTAGCTGCAAGAAACACTGGGAGAT...AGATATCAGGGGATAACCAGTTATCTCCACCACAGCAGCATACAGACAGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR-3UTR CAA 90 bp AGAGGCTGTCTGTATGCTGCTGTGGTGGAGATAACTGGTTATCCCCTGATATCTTTGCAGCTGGGCGCATaGCTGCCAGAAATAAAGACT +
Preference number: 3 (lower is better)
Translates to: RGCLYAAVVEITGYPLISLQLGA*LPEIKT
Trigger: AGTCTTTATTTCTGGCAGCAATGCGCCCAGCTGCAA...AGATATCAGGGGATAACCAGTTATCTCCACCACAGCAGCATACAGACAGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR GCA 72 bp GCCACCGTGCCTGGTCTTGAATTGGTTCTTACACAATaGAGAGAAGTCCACATTAGTATCCTGGATGTTCCG +
Preference number: 3 (lower is better)
Translates to: ATVPGLELVLTQ*REVHISILDVP
Trigger: CGGAACATCCAGGATACTAATGTGGACTTCTCTGCATTGTGTAAGAACCAATTCAAGACCAGGCACGGTGGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR CCA 72 bp AGGGAAGCCCGGTGCAAAGAAGGGAATTTCACTAGGTaGACCAAAACCAGATGTAGGGATCTAGGAGTTTGT +
Preference number: 3 (lower is better)
Translates to: REARCKEGNFTR*TKTRCRDLGVC
Trigger: ACAAACTCCTAGATCCCTACATCTGGTTTTGGTCCACCTAGTGAAATTCCCTTCTTTGCACCGGGCTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR CCA 72 bp GAGAGGCTGTCTGTATGCTGCTGTGGTGGAGATAACTaGTTATCCCCTGATATCTGCCATCTGGTTTCTCTA +
Preference number: 3 (lower is better)
Translates to: ERLSVCCCGGDN*LSPDICHLVSL
Trigger: TAGAGAAACCAGATGGCAGATATCAGGGGATAACCAGTTATCTCCACCACAGCAGCATACAGACAGCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR-3UTR CAA 90 bp ACTGTGTGCTTCATCTCTGCCATGTATGTAGTTCAGGCGTTTACGGGGTCTAATAGGGTTACTTGCTCATaGTCTGTCTTCTCTCGGGAG +
Preference number: 3 (lower is better)
Translates to: TVCFISAMYVVQAFTGSNRVTCS*SVFSRE
Trigger: CTCCCGAGAGAAGACAGACAATGAGCAAGTAACCCT...ATTAGACCCCGTAAACGCCTGAACTACATACATGGCAGAGATGAAGCACACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
3UTR-3UTR CAA 90 bp ATCTCTGCCATGTATGTAGTTCAGGCGTTTACGGGGTCTAATACAGGCCAGGCACATTCTGCTTGGTGTTaGCTGTTCTTGTGCAAGTCA +
Preference number: 3 (lower is better)
Translates to: ISAMYVVQAFTGSNTGQAHSAWC*LFLCKS
Trigger: TGACTTGCACAAGAACAGCAAACACCAAGCAGAATG...TGCCTGGCCTGTATTAGACCCCGTAAACGCCTGAACTACATACATGGCAGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
3UTR GCA 72 bp TGCTGTGGTGGAGATAACTGGTTATCCCCTGATATCTaGCATCTGGTTTCTCTAGTGAAAACTTGCAGCTGG +
Preference number: 3 (lower is better)
Translates to: CCGGDNWLSPDI*HLVSLVKTCSW
Trigger: CCAGCTGCAAGTTTTCACTAGAGAAACCAGATGGCAGATATCAGGGGATAACCAGTTATCTCCACCACAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR CCA 72 bp GACTTCTGTTTCTTTCTCAGCACACTGATTAGGGCCTaGCACAGAGTCAGCTTTCAACCACGTTTCAGGATT +
Preference number: 3 (lower is better)
Translates to: DFCFFLSTLIRA*HRVSFQPRFRI
Trigger: AATCCTGAAACGTGGTTGAAAGCTGACTCTGTGCCAGGCCCTAATCAGTGTGCTGAGAAAGAAACAGAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481731.5
3UTR TCA 72 bp CTCAATACCAGGGAGTCTCTGTATTGCTTGGCCTGCTaGTGGTCAACTTTCTGGTTGATTTCCACTGGTTTA +
Preference number: 3 (lower is better)
Translates to: LNTRESLYCLAC*WSTFWLISTGL
Trigger: TAAACCAGTGGAAATCAACCAGAAAGTTGACCATCAGCAGGCCAAGCAATACAGAGACTCCCTGGTATTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR GCA 72 bp AATTTGAACCTGCACAGCCAGATTTCCGAGACTGTGTaGTTCATCTCTGCCATGTATGTAGTTCAGGCGTTT +
Preference number: 3 (lower is better)
Translates to: NLNLHSQISETV*FISAMYVVQAF
Trigger: AAACGCCTGAACTACATACATGGCAGAGATGAAGCACACAGTCTCGGAAATCTGGCTGTGCAGGTTCAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp GCCTCTGCCTCCCAGTTCAAGCGGTTCTCCTGCCCCATCCTCCCAAGTAGCTGGGCCAGTCATTCCTGCTaGTCTGCCCAGAGGCATCTG +
Preference number: 4 (lower is better)
Translates to: ASASQFKRFSCPILPSSWASHSC*SAQRHL
Trigger: CAGATGCCTCTGGGCAGAGCAGCAGGAATGACTGGC...CCAGCTACTTGGGAGGATGGGGCAGGAGAACCGCTTGAACTGGGAGGCAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR TCA 90 bp GCCTCTGCCTCCCAGTTCAAGCGGTTCTCCTGCCCCATCCTCCCAAGTAGCTGGAAAGGCAGGTGTGTCTaGCTCCTGGGCATGCACACT +
Preference number: 4 (lower is better)
Translates to: ASASQFKRFSCPILPSSWKGRCV*LLGMHT
Trigger: AGTGTGCATGCCCAGGAGTCAGACACACCTGCCTTT...CCAGCTACTTGGGAGGATGGGGCAGGAGAACCGCTTGAACTGGGAGGCAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR TCA 90 bp GCCTCTGCCTCCCAGTTCAAGCGGTTCTCCTGCCCCATCCTCCCAAGTAGCTGGACTCTGATTAGTCACTaGGGGTGCACAGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: ASASQFKRFSCPILPSSWTLISH*GCTGRR
Trigger: CCTCCTCCCTGTGCACCCTCAGTGACTAATCAGAGT...CCAGCTACTTGGGAGGATGGGGCAGGAGAACCGCTTGAACTGGGAGGCAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR GCA 90 bp CTGGAGGTAGGGAAATGGTTGAGGAGCCCTGGCTCCTCTCCAACTCAGAGGGTCCGCACCAGAAAGGGCTaGAGCAGGGGCAAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: LEVGKWLRSPGSSPTQRVRTRKG*SRGKGV
Trigger: AACACCCTTGCCCCTGCTGCAGCCCTTTCTGGTGCG...GACCCTCTGAGTTGGAGAGGAGCCAGGGCTCCTCAACCATTTCCCTACCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CCA 90 bp CCCCAACACCAATTCCTGGGGCTGGATGATCCACAGGTCTGGTTCAGGGTCCCCGTGGTCCCCAAGACTTaGGGCTCCTCTGCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: PQHQFLGLDDPQVWFRVPVVPKT*GSSALL
Trigger: CAAGAGAGCAGAGGAGCCCCAAGTCTTGGGGACCAC...GGGGACCCTGAACCAGACCTGTGGATCATCCAGCCCCAGGAATTGGTGTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000608073.1
CDS-3UTR CCA 90 bp GCCTCTGCCTCCCAGTTCAAGCGGTTCTCCTGCCCCATCCTCCCAAGTAGCTGGGCTGTCTCCTTGGGGTaGGAGATGCCTCCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: ASASQFKRFSCPILPSSWAVSLG*EMPPKL
Trigger: CAACTTTGGAGGCATCTCCCACCCCAAGGAGACAGC...CCAGCTACTTGGGAGGATGGGGCAGGAGAACCGCTTGAACTGGGAGGCAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CCA 90 bp GCCTCAGGGTTAAAGGCAGGTGTGTCTGACTCCTGGGCATGCACACTCTTCCCCAAGGATGTAGCGAGGTaGGGAAAGGGGCAGGGCGCA +
Preference number: 4 (lower is better)
Translates to: ASGLKAGVSDSWACTLFPKDVAR*GKGQGA
Trigger: TGCGCCCTGCCCCTTTCCCCACCTCGCTACATCCTT...GGGGAAGAGTGTGCATGCCCAGGAGTCAGACACACCTGCCTTTAACCCTGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR TCA 90 bp TGGACCAAAACCAGATGTAGGGATCTAGGAGTTTGTCATGAGGCCTGGGGGCACCTCCCTGGAACCACCTaGTGGGTCCAGGGGGACCGT +
Preference number: 4 (lower is better)
Translates to: WTKTRCRDLGVCHEAWGHLPGTT*WVQGDR
Trigger: ACGGTCCCCCTGGACCCATCAGGTGGTTCCAGGGAG...GTGCCCCCAGGCCTCATGACAAACTCCTAGATCCCTACATCTGGTTTTGGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR GCA 90 bp CCCAACACCAATTCCTGGGGCTGGATGATCCACAGGTCTGGTTCAGGGTCCCCAGCCAGTCATTCCTGCTaGTCTGCCCAGAGGCATCTG +
Preference number: 4 (lower is better)
Translates to: PNTNSWGWMIHRSGSGSPASHSC*SAQRHL
Trigger: CAGATGCCTCTGGGCAGAGCAGCAGGAATGACTGGC...TGGGGACCCTGAACCAGACCTGTGGATCATCCAGCCCCAGGAATTGGTGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608073.1
CDS-3UTR GCA 90 bp GCCTCAGGGTTAAAGGCAGGTGTGTCTGACTCCTGGGCATGCACACTCTTCCCCTCGGGCTGTAGCACCTaGCAGTCATTCCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: ASGLKAGVSDSWACTLFPSGCST*QSFLLL
Trigger: GAGCAGCAGGAATGACTGGCAGGTGCTACAGCCCGA...GGGGAAGAGTGTGCATGCCCAGGAGTCAGACACACCTGCCTTTAACCCTGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR GCA 90 bp CTGGAGGTAGGGAAATGGTTGAGGAGCCCTGGCTCCTCTCCAACTCAGAGGGTCGGTGTTCATGGCTCCTaGTGGGCCTGTGGTCTTGAC +
Preference number: 4 (lower is better)
Translates to: LEVGKWLRSPGSSPTQRVGVHGS*WACGLD
Trigger: GTCAAGACCACAGGCCCAGCAGGAGCCATGAACACC...GACCCTCTGAGTTGGAGAGGAGCCAGGGCTCCTCAACCATTTCCCTACCTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR GCA 90 bp CTGGAGGTAGGGAAATGGTTGAGGAGCCCTGGCTCCTCTCCAACTCAGAGGGTCTGCCCCACATCATGCTaGCCCAGGGGAGGTGATAGT +
Preference number: 4 (lower is better)
Translates to: LEVGKWLRSPGSSPTQRVCPTSC*PRGGDS
Trigger: ACTATCACCTCCCCTGGGGCAGCATGATGTGGGGCA...GACCCTCTGAGTTGGAGAGGAGCCAGGGCTCCTCAACCATTTCCCTACCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CCA 90 bp GCCTCAGGGTTAAAGGCAGGTGTGTCTGACTCCTGGGCATGCACACTCTTCCCCGTGGTCCCCAAGACTTaGGGCTCCTCTGCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: ASGLKAGVSDSWACTLFPVVPKT*GSSALL
Trigger: CAAGAGAGCAGAGGAGCCCCAAGTCTTGGGGACCAC...GGGGAAGAGTGTGCATGCCCAGGAGTCAGACACACCTGCCTTTAACCCTGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CCA 90 bp GCCTCAGGGTTAAAGGCAGGTGTGTCTGACTCCTGGGCATGCACACTCTTCCCCCTCAGACCAGCTCCCTaGAACCACCTGATGGGTCCA +
Preference number: 4 (lower is better)
Translates to: ASGLKAGVSDSWACTLFPLRPAP*NHLMGP
Trigger: TGGACCCATCAGGTGGTTCCAGGGAGCTGGTCTGAG...GGGGAAGAGTGTGCATGCCCAGGAGTCAGACACACCTGCCTTTAACCCTGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CCA 90 bp CTGGAGGTAGGGAAATGGTTGAGGAGCCCTGGCTCCTCTCCAACTCAGAGGGTCCTGGAGGTAGGGAAATaGTTGAGGAGCCCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: LEVGKWLRSPGSSPTQRVLEVGK*LRSPGS
Trigger: GGAGCCAGGGCTCCTCAACCATTTCCCTACCTCCAG...GACCCTCTGAGTTGGAGAGGAGCCAGGGCTCCTCAACCATTTCCCTACCTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR TCA 90 bp GCCTCTGCCTCCCAGTTCAAGCGGTTCTCCTGCCCCATCCTCCCAAGTAGCTGGCAGTGTGCTCCCTGGTaGCATTGTGGATATAGATGG +
Preference number: 4 (lower is better)
Translates to: ASASQFKRFSCPILPSSWQCAPW*HCGYRW
Trigger: CCATCTATATCCACAATGTCACCAGGGAGCACACTG...CCAGCTACTTGGGAGGATGGGGCAGGAGAACCGCTTGAACTGGGAGGCAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR TCA 90 bp CTGTTCCTTGTACTTTTCAGCTCTTCCCCTGGGTATCTGCAGGGCTCTCTTCCTCTCCCTGGAACCACCTaGTGGGTCCAGGGGGACCGT +
Preference number: 4 (lower is better)
Translates to: LFLVLFSSSPGYLQGSLPLPGTT*WVQGDR
Trigger: ACGGTCCCCCTGGACCCATCAGGTGGTTCCAGGGAG...AGGAAGAGAGCCCTGCAGATACCCAGGGGAAGAGCTGAAAAGTACAAGGAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR TCA 90 bp GAGATAAGTGAGGTGGCCAAGTTCCTGACTGTGCACTTAAAGGGGAGGGTCCTGCAGGGGCAAGGGTGTTaGGGAGAGACTGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: EISEVAKFLTVHLKGRVLQGQGC*GETEPG
Trigger: CCCTGGCTCAGTCTCTCCTCAACACCCTTGCCCCTG...CAGGACCCTCCCCTTTAAGTGCACAGTCAGGAACTTGGCCACCTCACTTATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR TCA 90 bp GCTGTTCCTTGTACTTTTCAGCTCTTCCCCTGGGTATCTGCAGGGCTCTCTTCCGTGAGTGTTGGAGTCTaGGGCGGGGCCCGTGGACAA +
Preference number: 4 (lower is better)
Translates to: AVPCTFQLFPWVSAGLSSVSVGV*GGARGQ
Trigger: TTGTCCACGGGCCCCGCCTCAGACTCCAACACTCAC...GGAAGAGAGCCCTGCAGATACCCAGGGGAAGAGCTGAAAAGTACAAGGAACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR TCA 90 bp GCCAGGCATTCTGCTTGGTGTTTGCTGTTCTTGTGCAAGTCAAGCACGCTCCTGGTGAGTGTTGGAGTCTaGGGCGGGGCCCGTGGACAA +
Preference number: 4 (lower is better)
Translates to: ARHSAWCLLFLCKSSTLLVSVGV*GGARGQ
Trigger: TTGTCCACGGGCCCCGCCTCAGACTCCAACACTCAC...CAGGAGCGTGCTTGACTTGCACAAGAACAGCAAACACCAAGCAGAATGCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp ACTGGAGGTAGGGAAATGGTTGAGGAGCCCTGGCTCCTCTCCAACTCAGAGGGTCCTGCCAGTCATTCCTaGTGCTCTGCCCAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: TGGREMVEEPWLLSNSEGPASHS*CSAQRH
Trigger: ATGCCTCTGGGCAGAGCAGCAGGAATGACTGGCAGG...ACCCTCTGAGTTGGAGAGGAGCCAGGGCTCCTCAACCATTTCCCTACCTCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR GCA 90 bp ACTGGAGGTAGGGAAATGGTTGAGGAGCCCTGGCTCCTCTCCAACTCAGAGGGTTCATTGTTGGAGGCCTaGACCGCTGTCTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: TGGREMVEEPWLLSNSEGSLLEA*TAVSLG
Trigger: CCCCAAGGAGACAGCGGTGCAGGCCTCCAACAATGA...ACCCTCTGAGTTGGAGAGGAGCCAGGGCTCCTCAACCATTTCCCTACCTCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR GCA 90 bp GCCTCTGCCTCCCAGTTCAAGCGGTTCTCCTGCCCCATCCTCCCAAGTAGCTGGTCACTTTCAGGCTGGTaGCCTGTCCAGACAGGTATT +
Preference number: 4 (lower is better)
Translates to: ASASQFKRFSCPILPSSWSLSGW*PVQTGI
Trigger: AATACCTGTCTGGACAGGGCACCAGCCTGAAAGTGA...CCAGCTACTTGGGAGGATGGGGCAGGAGAACCGCTTGAACTGGGAGGCAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR GCA 90 bp GAGATAAGTGAGGTGGCCAAGTTCCTGACTGTGCACTTAAAGGGGAGGGTCCTGCCCCAGGACCACAGGTaGGAACACAACCAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: EISEVAKFLTVHLKGRVLPQDHR*EHNQEA
Trigger: GGCCTCCTGGTTGTGTTCGCACCTGTGGTCCTGGGG...CAGGACCCTCCCCTTTAAGTGCACAGTCAGGAACTTGGCCACCTCACTTATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR GCA 90 bp GCCTCAGGGTTAAAGGCAGGTGTGTCTGACTCCTGGGCATGCACACTCTTCCCCGTCTTGACATCTTCTTaGCCAGGGCTCCTCCGAGAG +
Preference number: 4 (lower is better)
Translates to: ASGLKAGVSDSWACTLFPVLTSS*PGLLRE
Trigger: CTCTCGGAGGAGCCCTGGGCAAGAAGATGTCAAGAC...GGGGAAGAGTGTGCATGCCCAGGAGTCAGACACACCTGCCTTTAACCCTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR GCA 90 bp GCCTCTGCCTCCCAGTTCAAGCGGTTCTCCTGCCCCATCCTCCCAAGTAGCTGGTCTCTAGTGAAAACTTaGAGCTGGGCGCATTGCTGC +
Preference number: 4 (lower is better)
Translates to: ASASQFKRFSCPILPSSWSLVKT*SWAHCC
Trigger: GCAGCAATGCGCCCAGCTGCAAGTTTTCACTAGAGA...CCAGCTACTTGGGAGGATGGGGCAGGAGAACCGCTTGAACTGGGAGGCAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR GCA 90 bp ACTGGAGGTAGGGAAATGGTTGAGGAGCCCTGGCTCCTCTCCAACTCAGAGGGTGCGATCTCAGCTCACTaGAGCCTCTGCCTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: TGGREMVEEPWLLSNSEGAISAH*SLCLPV
Trigger: AACTGGGAGGCAGAGGCTGCAGTGAGCTGAGATCGC...ACCCTCTGAGTTGGAGAGGAGCCAGGGCTCCTCAACCATTTCCCTACCTCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CCA 90 bp GCCTCTGCCTCCCAGTTCAAGCGGTTCTCCTGCCCCATCCTCCCAAGTAGCTGGAGACAGTGTCTCCAGTaGTCCCCAACACCAATTCCT +
Preference number: 4 (lower is better)
Translates to: ASASQFKRFSCPILPSSWRQCLQ*SPTPIP
Trigger: AGGAATTGGTGTTGGGGACCACTGGAGACACTGTCT...CCAGCTACTTGGGAGGATGGGGCAGGAGAACCGCTTGAACTGGGAGGCAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CCA 90 bp GCCTCAGGGTTAAAGGCAGGTGTGTCTGACTCCTGGGCATGCACACTCTTCCCCATGCTAAGGTGTTCATaGCTCCTGCTGGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: ASGLKAGVSDSWACTLFPMLRCS*LLLGLW
Trigger: CCACAGGCCCAGCAGGAGCCATGAACACCTTAGCAT...GGGGAAGAGTGTGCATGCCCAGGAGTCAGACACACCTGCCTTTAACCCTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR TCA 90 bp TTCCTTGTACTTTTCAGCTCTTCCCCTGGGTATCTGCAGGGCTCTCTTCCTCACCTGCCCAGAGGCATCTaGGGGGACAAGGACCAGTGC +
Preference number: 4 (lower is better)
Translates to: FLVLFSSSPGYLQGSLPHLPRGI*GDKDQC
Trigger: GCACTGGTCCTTGTCCCCTCAGATGCCTCTGGGCAG...GTGAGGAAGAGAGCCCTGCAGATACCCAGGGGAAGAGCTGAAAAGTACAAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR TCA 90 bp CTGGAGGTAGGGAAATGGTTGAGGAGCCCTGGCTCCTCTCCAACTCAGAGGGTCCTGGGAAGAAGACTCTaGGTTGGATGTTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: LEVGKWLRSPGSSPTQRVLGRRL*VGCWRP
Trigger: TGGCCTCCAACATCCAACTCAGAGTCTTCTTCCCAG...GACCCTCTGAGTTGGAGAGGAGCCAGGGCTCCTCAACCATTTCCCTACCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR GCA 90 bp CTGGAGGTAGGGAAATGGTTGAGGAGCCCTGGCTCCTCTCCAACTCAGAGGGTCGATAGTGGGAAGAAGTaGTGGCTAGCTAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LEVGKWLRSPGSSPTQRVDSGKK*WLASWA
Trigger: TGCCCAGCTAGCTAGCCAGCACTTCTTCCCACTATC...GACCCTCTGAGTTGGAGAGGAGCCAGGGCTCCTCAACCATTTCCCTACCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CCA 90 bp GCCTCAGGGTTAAAGGCAGGTGTGTCTGACTCCTGGGCATGCACACTCTTCCCCATGTCCGTTGGATCATaGGCATTACCCCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: ASGLKAGVSDSWACTLFPMSVGS*ALPQGR
Trigger: CCTTCCCTGGGGTAATGCCCATGATCCAACGGACAT...GGGGAAGAGTGTGCATGCCCAGGAGTCAGACACACCTGCCTTTAACCCTGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CCA 90 bp TCTTCTGTCCACCCTAGGGTTACTTGCTCATTGTCTGTCTTCTCTCGGGAGGAGCTGAGGCGGGGCCCGTaGACAAGGCAGTTTCTGCGT +
Preference number: 4 (lower is better)
Translates to: SSVHPRVTCSLSVFSREELRRGP*TRQFLR
Trigger: ACGCAGAAACTGCCTTGTCCACGGGCCCCGCCTCAG...CTCCTCCCGAGAGAAGACAGACAATGAGCAAGTAACCCTAGGGTGGACAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CCA 90 bp AGGCCAGGCATTCTGCTTGGTGTTTGCTGTTCTTGTGCAAGTCAAGCACGCTCCCTCTCTTGTGAGTGTTaGAGTCTGAGGCGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: RPGILLGVCCSCASQARSLSCEC*SLRRGP
Trigger: CGGGCCCCGCCTCAGACTCCAACACTCACAAGAGAG...GGAGCGTGCTTGACTTGCACAAGAACAGCAAACACCAAGCAGAATGCCTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR TCA 90 bp ACCTCCTTCAGGTGTCTGCTCAAATGTCACTTTATCAGGAGGCCTCTTCTGTCCCTGCCCAGAGGCATCTaGGGGGACAAGGACCAGTGC +
Preference number: 4 (lower is better)
Translates to: TSFRCLLKCHFIRRPLLSLPRGI*GDKDQC
Trigger: GCACTGGTCCTTGTCCCCTCAGATGCCTCTGGGCAG...GGACAGAAGAGGCCTCCTGATAAAGTGACATTTGAGCAGACACCTGAAGGAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR TCA 90 bp ATGTCACTTTATCAGGAGGCCTCTTCTGTCCACCCTAGGGTTACTTGCTCATTGCTCCCTGGAACCACCTaGTGGGTCCAGGGGGACCGT +
Preference number: 4 (lower is better)
Translates to: MSLYQEASSVHPRVTCSLLPGTT*WVQGDR
Trigger: ACGGTCCCCCTGGACCCATCAGGTGGTTCCAGGGAG...CAATGAGCAAGTAACCCTAGGGTGGACAGAAGAGGCCTCCTGATAAAGTGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp GCATTCGCTGTTCCTTGTACTTTTCAGCTCTTCCCCTGGGTATCTGCAGGGCTCGCCAGTCATTCCTGCTaGTCTGCCCAGAGGCATCTG +
Preference number: 4 (lower is better)
Translates to: AFAVPCTFQLFPWVSAGLASHSC*SAQRHL
Trigger: CAGATGCCTCTGGGCAGAGCAGCAGGAATGACTGGC...GAGCCCTGCAGATACCCAGGGGAAGAGCTGAAAAGTACAAGGAACAGCGAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp TTGCTGTTCTTGTGCAAGTCAAGCACGCTCCTGCCTCAGGACCTTTGCATTCGCTCGGGCTGTAGCACCTaGCAGTCATTCCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LLFLCKSSTLLPQDLCIRSGCST*QSFLLL
Trigger: GAGCAGCAGGAATGACTGGCAGGTGCTACAGCCCGA...GCGAATGCAAAGGTCCTGAGGCAGGAGCGTGCTTGACTTGCACAAGAACAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp ACTGGAGGTAGGGAAATGGTTGAGGAGCCCTGGCTCCTCTCCAACTCAGAGGGTCTTTTCCAGTCTGGCTaGCTAGAAGGTGGACCTGGT +
Preference number: 4 (lower is better)
Translates to: TGGREMVEEPWLLSNSEGLFQSG*LEGGPG
Trigger: ACCAGGTCCACCTTCTAGGCAGCCAGACTGGAAAAG...ACCCTCTGAGTTGGAGAGGAGCCAGGGCTCCTCAACCATTTCCCTACCTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CCA 90 bp GAGATAAGTGAGGTGGCCAAGTTCCTGACTGTGCACTTAAAGGGGAGGGTCCTGTGGGGGCCGACATCGTaGAGCACATGGCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: EISEVAKFLTVHLKGRVLWGPTS*STWHLL
Trigger: CAGAAGATGCCATGTGCTCCACGATGTCGGCCCCCA...CAGGACCCTCCCCTTTAAGTGCACAGTCAGGAACTTGGCCACCTCACTTATCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CCA 90 bp CTGTTCTTGTGCAAGTCAAGCACGCTCCTGCCTCAGGACCTTTGCATTCGCTGTTGGGGGCCGACATCGTaGAGCACATGGCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: LFLCKSSTLLPQDLCIRCWGPTS*STWHLL
Trigger: CAGAAGATGCCATGTGCTCCACGATGTCGGCCCCCA...ACAGCGAATGCAAAGGTCCTGAGGCAGGAGCGTGCTTGACTTGCACAAGAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CCA 90 bp GCCTCTGCCTCCCAGTTCAAGCGGTTCTCCTGCCCCATCCTCCCAAGTAGCTGGCACAGATGGTCTGGCTaGTTGAGTTCAGAGATTCTT +
Preference number: 4 (lower is better)
Translates to: ASASQFKRFSCPILPSSWHRWSG*LSSEIL
Trigger: AAGAATCTCTGAACTCAACCAGCCAGACCATCTGTG...CCAGCTACTTGGGAGGATGGGGCAGGAGAACCGCTTGAACTGGGAGGCAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CCA 90 bp CTTCAGGTGTCTGCTCAAATGTCACTTTATCAGGAGGCCTCTTCTGTCCACCCTCTGAGGCGGGGCCCGTaGACAAGGCAGTTTCTGCGT +
Preference number: 4 (lower is better)
Translates to: LQVSAQMSLYQEASSVHPLRRGP*TRQFLR
Trigger: ACGCAGAAACTGCCTTGTCCACGGGCCCCGCCTCAG...AGGGTGGACAGAAGAGGCCTCCTGATAAAGTGACATTTGAGCAGACACCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR TCA 90 bp TGGACCAAAACCAGATGTAGGGATCTAGGAGTTTGTCATGAGGCCTGGGGGCACCTGACCCCTCACTCTTaGCCCTTGCTCCATGCTAAG +
Preference number: 4 (lower is better)
Translates to: WTKTRCRDLGVCHEAWGHLTPHS*PLLHAK
Trigger: CTTAGCATGGAGCAAGGGTCAAGAGTGAGGGGTCAG...GTGCCCCCAGGCCTCATGACAAACTCCTAGATCCCTACATCTGGTTTTGGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR TCA 90 bp GCCTCTGCCTCCCAGTTCAAGCGGTTCTCCTGCCCCATCCTCCCAAGTAGCTGGAAAGCAAGGAGGTCTTaGACAGGCCAAAAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: ASASQFKRFSCPILPSSWKARRS*TGQKEK
Trigger: TTTCTCTTTTTGGCCTGTTCAAGACCTCCTTGCTTT...CCAGCTACTTGGGAGGATGGGGCAGGAGAACCGCTTGAACTGGGAGGCAGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR GCA 90 bp CTGTTCCTTGTACTTTTCAGCTCTTCCCCTGGGTATCTGCAGGGCTCTCTTCCTTCATTCCTGCTGCTCTaGCCAGAGGCATCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: LFLVLFSSSPGYLQGSLPSFLLL*PEASEG
Trigger: CCCCTCAGATGCCTCTGGGCAGAGCAGCAGGAATGA...AGGAAGAGAGCCCTGCAGATACCCAGGGGAAGAGCTGAAAAGTACAAGGAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp CTGTTCCTTGTACTTTTCAGCTCTTCCCCTGGGTATCTGCAGGGCTCTCTTCCTGCCAGTCATTCCTGCTaGTCTGCCCAGAGGCATCTG +
Preference number: 4 (lower is better)
Translates to: LFLVLFSSSPGYLQGSLPASHSC*SAQRHL
Trigger: CAGATGCCTCTGGGCAGAGCAGCAGGAATGACTGGC...AGGAAGAGAGCCCTGCAGATACCCAGGGGAAGAGCTGAAAAGTACAAGGAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp CCCCAGCTCCCTTCACAAGCACTGAGGTGCCTTCATCCGATTTCATTTCTGAGTCCTGCCAGTCATTCCTaGTGCTCTGCCCAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: PQLPSQALRCLHPISFLSPASHS*CSAQRH
Trigger: ATGCCTCTGGGCAGAGCAGCAGGAATGACTGGCAGG...ACTCAGAAATGAAATCGGATGAAGGCACCTCAGTGCTTGTGAAGGGAGCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608073.1
CDS-3UTR GCA 90 bp CCCCAGCTCCCTTCACAAGCACTGAGGTGCCTTCATCCGATTTCATTTCTGAGTTCGGGCTGTAGCACCTaGCAGTCATTCCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PQLPSQALRCLHPISFLSSGCST*QSFLLL
Trigger: GAGCAGCAGGAATGACTGGCAGGTGCTACAGCCCGA...ACTCAGAAATGAAATCGGATGAAGGCACCTCAGTGCTTGTGAAGGGAGCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608073.1
CDS-3UTR GCA 90 bp CAGGAGGCCTCTTCTGTCCACCCTAGGGTTACTTGCTCATTGTCTGTCTTCTCTAAGTGTCTCACCTTCTaGCACCAGCATGGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: QEASSVHPRVTCSLSVFSKCLTF*HQHGAL
Trigger: GAGGGCCCCATGCTGGTGGCAGAAGGTGAGACACTT...AGAGAAGACAGACAATGAGCAAGTAACCCTAGGGTGGACAGAAGAGGCCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp TCCAAGCACTGTGCAGTTCAGAAAGACAGTGTCTCCAGTGGTCCCCAACACCAAAAGTGTCTCACCTTCTaGCACCAGCATGGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: SKHCAVQKDSVSSGPQHQKCLTF*HQHGAL
Trigger: GAGGGCCCCATGCTGGTGGCAGAAGGTGAGACACTT...TTGGTGTTGGGGACCACTGGAGACACTGTCTTTCTGAACTGCACAGTGCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000608073.1
CDS-3UTR GCA 90 bp GCCTCAGGGTTAAAGGCAGGTGTGTCTGACTCCTGGGCATGCACACTCTTCCCCTTATCATACCATCAGTaGAGGAGCCGACCACCATAC +
Preference number: 4 (lower is better)
Translates to: ASGLKAGVSDSWACTLFPLSYHQ*RSRPPY
Trigger: GTATGGTGGTCGGCTCCTGCACTGATGGTATGATAA...GGGGAAGAGTGTGCATGCCCAGGAGTCAGACACACCTGCCTTTAACCCTGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR GCA 90 bp ACTGGAGGTAGGGAAATGGTTGAGGAGCCCTGGCTCCTCTCCAACTCAGAGGGTCCTTGGGGTGGGAGATaGCTCCAAAGTTGTAAATGG +
Preference number: 4 (lower is better)
Translates to: TGGREMVEEPWLLSNSEGPWGGR*LQSCKW
Trigger: CCATTTACAACTTTGGAGGCATCTCCCACCCCAAGG...ACCCTCTGAGTTGGAGAGGAGCCAGGGCTCCTCAACCATTTCCCTACCTCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR GCA 90 bp GAATCCTGGGTCTCAATACCAGGGAGTCTCTGTATTGCTTGGCCTGCTGATGGTTTGCCCAGGCTGGAGTaGAATGGCGCGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: ESWVSIPGSLCIAWPADGLPRLE*NGAISA
Trigger: AGCTGAGATCGCGCCATTGCACTCCAGCCTGGGCAA...ACCATCAGCAGGCCAAGCAATACAGAGACTCCCTGGTATTGAGACCCAGGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CCA 90 bp TTCGCTGTTCCTTGTACTTTTCAGCTCTTCCCCTGGGTATCTGCAGGGCTCTCTTGGGGGCCGACATCGTaGAGCACATGGCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: FAVPCTFQLFPWVSAGLSWGPTS*STWHLL
Trigger: CAGAAGATGCCATGTGCTCCACGATGTCGGCCCCCA...AGAGAGCCCTGCAGATACCCAGGGGAAGAGCTGAAAAGTACAAGGAACAGCGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CCA 90 bp TCCAAGCACTGTGCAGTTCAGAAAGACAGTGTCTCCAGTGGTCCCCAACACCAATGGGGGCCGACATCGTaGAGCACATGGCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: SKHCAVQKDSVSSGPQHQWGPTS*STWHLL
Trigger: CAGAAGATGCCATGTGCTCCACGATGTCGGCCCCCA...TTGGTGTTGGGGACCACTGGAGACACTGTCTTTCTGAACTGCACAGTGCTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608073.1
CDS-3UTR CCA 90 bp GGTCCCCAGCTCCCTTCACAAGCACTGAGGTGCCTTCATCCGATTTCATTTCTGCCCAACACCAATTCCTaGGGCTGGATGATCCACAGG +
Preference number: 4 (lower is better)
Translates to: GPQLPSQALRCLHPISFLPNTNS*GWMIHR
Trigger: CCTGTGGATCATCCAGCCCCAGGAATTGGTGTTGGG...CAGAAATGAAATCGGATGAAGGCACCTCAGTGCTTGTGAAGGGAGCTGGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608073.1
CDS-3UTR CCA 90 bp CAGGAGGCCTCTTCTGTCCACCCTAGGGTTACTTGCTCATTGTCTGTCTTCTCTCTCAGACCAGCTCCCTaGAACCACCTGATGGGTCCA +
Preference number: 4 (lower is better)
Translates to: QEASSVHPRVTCSLSVFSLRPAP*NHLMGP
Trigger: TGGACCCATCAGGTGGTTCCAGGGAGCTGGTCTGAG...AGAGAAGACAGACAATGAGCAAGTAACCCTAGGGTGGACAGAAGAGGCCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CCA 90 bp CTTGGTGTTTGCTGTTCTTGTGCAAGTCAAGCACGCTCCTGCCTCAGGACCTTTCTCAGACCAGCTCCCTaGAACCACCTGATGGGTCCA +
Preference number: 4 (lower is better)
Translates to: LGVCCSCASQARSCLRTFLRPAP*NHLMGP
Trigger: TGGACCCATCAGGTGGTTCCAGGGAGCTGGTCTGAG...AAAGGTCCTGAGGCAGGAGCGTGCTTGACTTGCACAAGAACAGCAAACACCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CCA 90 bp GCTGTTCCTTGTACTTTTCAGCTCTTCCCCTGGGTATCTGCAGGGCTCTCTTCCGCTGTCTCCTTGGGGTaGGAGATGCCTCCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: AVPCTFQLFPWVSAGLSSAVSLG*EMPPKL
Trigger: CAACTTTGGAGGCATCTCCCACCCCAAGGAGACAGC...GGAAGAGAGCCCTGCAGATACCCAGGGGAAGAGCTGAAAAGTACAAGGAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CCA 90 bp CTTCAGGTGTCTGCTCAAATGTCACTTTATCAGGAGGCCTCTTCTGTCCACCCTGCACCGCTGTCTCCTTaGGGTGGGAGATGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: LQVSAQMSLYQEASSVHPAPLSP*GGRCLQ
Trigger: TTGGAGGCATCTCCCACCCCAAGGAGACAGCGGTGC...AGGGTGGACAGAAGAGGCCTCCTGATAAAGTGACATTTGAGCAGACACCTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CCA 90 bp GCCTCAGGGTTAAAGGCAGGTGTGTCTGACTCCTGGGCATGCACACTCTTCCCCGAGATCAGTGAATCCTaGGTCTCAATACCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: ASGLKAGVSDSWACTLFPEISES*VSIPGS
Trigger: ACTCCCTGGTATTGAGACCCAGGATTCACTGATCTC...GGGGAAGAGTGTGCATGCCCAGGAGTCAGACACACCTGCCTTTAACCCTGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CCA 90 bp TGGACCAAAACCAGATGTAGGGATCTAGGAGTTTGTCATGAGGCCTGGGGGCACCCCTCTTTTCCAGTCTaGCTGCCTAGAAGGTGGACC +
Preference number: 4 (lower is better)
Translates to: WTKTRCRDLGVCHEAWGHPSFPV*LPRRWT
Trigger: GGTCCACCTTCTAGGCAGCCAGACTGGAAAAGAGGG...GTGCCCCCAGGCCTCATGACAAACTCCTAGATCCCTACATCTGGTTTTGGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CCA 90 bp TATGTAGTTCAGGCGTTTACGGGGTCTAATACAGGCCAGGCATTCTGCTTGGTGCTCTCTTGTGAGTGTTaGAGTCTGAGGCGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: YVVQAFTGSNTGQAFCLVLSCEC*SLRRGP
Trigger: CGGGCCCCGCCTCAGACTCCAACACTCACAAGAGAG...CACCAAGCAGAATGCCTGGCCTGTATTAGACCCCGTAAACGCCTGAACTACATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
3UTR CAA 72 bp GAGGCCTCTTCTGTCCACCCTAGGGTTACTTGCTCATaGTCTGTCTTCTCTCGGGAGGAGGTAAGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: EASSVHPRVTCS*SVFSREEVSSE
Trigger: CTCAGAGCTTACCTCCTCCCGAGAGAAGACAGACAATGAGCAAGTAACCCTAGGGTGGACAGAAGAGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR TCA 90 bp TGTGGTGGAGATAACTGGTTATCCCCTGATATCTGCCATCTGGTTTCTCTAGTGCTGCCCAGAGGCATCTaGGGGGACAAGGACCAGTGC +
Preference number: 4 (lower is better)
Translates to: CGGDNWLSPDICHLVSLVLPRGI*GDKDQC
Trigger: GCACTGGTCCTTGTCCCCTCAGATGCCTCTGGGCAG...CACTAGAGAAACCAGATGGCAGATATCAGGGGATAACCAGTTATCTCCACCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR TCA 90 bp CTGGAGGTAGGGAAATGGTTGAGGAGCCCTGGCTCCTCTCCAACTCAGAGGGTCTTTGCAGAAGAATGCTaGAGTCATTGTTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LEVGKWLRSPGSSPTQRVFAEEC*SHCWRP
Trigger: AGGCCTCCAACAATGACTTCAGCATTCTTCTGCAAA...GACCCTCTGAGTTGGAGAGGAGCCAGGGCTCCTCAACCATTTCCCTACCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR TCA 90 bp AGAGGCTGTCTGTATGCTGCTGTGGTGGAGATAACTGGTTATCCCCTGATATCTTCCTCACTCTGGGGCTaGCCCCTCACTCTTGACCCT +
Preference number: 4 (lower is better)
Translates to: RGCLYAAVVEITGYPLISSSLWG*PLTLDP
Trigger: AGGGTCAAGAGTGAGGGGTCAGCCCCAGAGTGAGGA...AGATATCAGGGGATAACCAGTTATCTCCACCACAGCAGCATACAGACAGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR TCA 90 bp AGAGGCTGTCTGTATGCTGCTGTGGTGGAGATAACTGGTTATCCCCTGATATCTGTCCCACAGGGCAGGTaGGAGGCTGTCTGTATGCTG +
Preference number: 4 (lower is better)
Translates to: RGCLYAAVVEITGYPLISVPQGR*EAVCML
Trigger: CAGCATACAGACAGCCTCTCACCTGCCCTGTGGGAC...AGATATCAGGGGATAACCAGTTATCTCCACCACAGCAGCATACAGACAGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR GCA 90 bp TGGACCAAAACCAGATGTAGGGATCTAGGAGTTTGTCATGAGGCCTGGGGGCACGACTTGGGGCTCCTCTaGTCTCTTGTGAGTGTTGGA +
Preference number: 4 (lower is better)
Translates to: WTKTRCRDLGVCHEAWGHDLGLL*SLVSVG
Trigger: TCCAACACTCACAAGAGAGCAGAGGAGCCCCAAGTC...GTGCCCCCAGGCCTCATGACAAACTCCTAGATCCCTACATCTGGTTTTGGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR GCA 90 bp AGCACACTGATTAGGGCCTGGCACAGAGTCAGCTTTCAACCACGTTTCAGGATTCCTGCCAGTCATTCCTaGTGCTCTGCCCAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: STLIRAWHRVSFQPRFRIPASHS*CSAQRH
Trigger: ATGCCTCTGGGCAGAGCAGCAGGAATGACTGGCAGG...AATCCTGAAACGTGGTTGAAAGCTGACTCTGTGCCAGGCCCTAATCAGTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481731.5
CDS-3UTR GCA 90 bp AGGGTTACTTGCTCATTGTCTGTCTTCTCTCGGGAGGAGGTAAGCTCTGAGAGACCTGCCAGTCATTCCTaGTGCTCTGCCCAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: RVTCSLSVFSREEVSSERPASHS*CSAQRH
Trigger: ATGCCTCTGGGCAGAGCAGCAGGAATGACTGGCAGG...TCTCTCAGAGCTTACCTCCTCCCGAGAGAAGACAGACAATGAGCAAGTAACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp ACAGACATCTCCTGGGAAGAAGACTCTGAGTTGGATGTTGGAGGCCAAGAAGGAAAGTGTCTCACCTTCTaGCACCAGCATGGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: TDISWEEDSELDVGGQEGKCLTF*HQHGAL
Trigger: GAGGGCCCCATGCTGGTGGCAGAAGGTGAGACACTT...TCCTTCTTGGCCTCCAACATCCAACTCAGAGTCTTCTTCCCAGGAGATGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR GCA 90 bp CACCTCCTTCAGGTGTCTGCTCAAATGTCACTTTATCAGGAGGCCTCTTCTGTCAAGTGTCTCACCTTCTaGCACCAGCATGGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: HLLQVSAQMSLYQEASSVKCLTF*HQHGAL
Trigger: GAGGGCCCCATGCTGGTGGCAGAAGGTGAGACACTT...GACAGAAGAGGCCTCCTGATAAAGTGACATTTGAGCAGACACCTGAAGGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp ACTGGAGGTAGGGAAATGGTTGAGGAGCCCTGGCTCCTCTCCAACTCAGAGGGTCCTGTTGGTCCTGAGTaGTCACCTTCACCCATTTTA +
Preference number: 4 (lower is better)
Translates to: TGGREMVEEPWLLSNSEGPVGPE*SPSPIL
Trigger: TAAAATGGGTGAAGGTGAGCACTCAGGACCAACAGG...ACCCTCTGAGTTGGAGAGGAGCCAGGGCTCCTCAACCATTTCCCTACCTCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR GCA 90 bp CACCTCCTTCAGGTGTCTGCTCAAATGTCACTTTATCAGGAGGCCTCTTCTGTCTCATTGTTGGAGGCCTaGACCGCTGTCTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: HLLQVSAQMSLYQEASSVSLLEA*TAVSLG
Trigger: CCCCAAGGAGACAGCGGTGCAGGCCTCCAACAATGA...GACAGAAGAGGCCTCCTGATAAAGTGACATTTGAGCAGACACCTGAAGGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CCA 90 bp TGTTTGCTGTTCTTGTGCAAGTCAAGCACGCTCCTGCCTCAGGACCTTTGCATTGTGGTCCCCAAGACTTaGGGCTCCTCTGCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: CLLFLCKSSTLLPQDLCIVVPKT*GSSALL
Trigger: CAAGAGAGCAGAGGAGCCCCAAGTCTTGGGGACCAC...AATGCAAAGGTCCTGAGGCAGGAGCGTGCTTGACTTGCACAAGAACAGCAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CCA 90 bp TTGCTGTTCTTGTGCAAGTCAAGCACGCTCCTGCCTCAGGACCTTTGCATTCGCATGTCCGTTGGATCATaGGCATTACCCCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LLFLCKSSTLLPQDLCIRMSVGS*ALPQGR
Trigger: CCTTCCCTGGGGTAATGCCCATGATCCAACGGACAT...GCGAATGCAAAGGTCCTGAGGCAGGAGCGTGCTTGACTTGCACAAGAACAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CCA 90 bp GCATTCGCTGTTCCTTGTACTTTTCAGCTCTTCCCCTGGGTATCTGCAGGGCTCACCAATTCCTGGGGCTaGATGATCCACAGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: AFAVPCTFQLFPWVSAGLTNSWG*MIHRSG
Trigger: ACCAGACCTGTGGATCATCCAGCCCCAGGAATTGGT...GAGCCCTGCAGATACCCAGGGGAAGAGCTGAAAAGTACAAGGAACAGCGAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CCA 90 bp GAGATAAGTGAGGTGGCCAAGTTCCTGACTGTGCACTTAAAGGGGAGGGTCCTGCTCCAAAGTTGTAAATaGCCTCCCGGCTCAGACCAG +
Preference number: 4 (lower is better)
Translates to: EISEVAKFLTVHLKGRVLLQSCK*PPGSDQ
Trigger: CTGGTCTGAGCCGGGAGGCCATTTACAACTTTGGAG...CAGGACCCTCCCCTTTAAGTGCACAGTCAGGAACTTGGCCACCTCACTTATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CCA 90 bp AGAGGCTGTCTGTATGCTGCTGTGGTGGAGATAACTGGTTATCCCCTGATATCTGCACCGCTGTCTCCTTaGGGTGGGAGATGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: RGCLYAAVVEITGYPLISAPLSP*GGRCLQ
Trigger: TTGGAGGCATCTCCCACCCCAAGGAGACAGCGGTGC...AGATATCAGGGGATAACCAGTTATCTCCACCACAGCAGCATACAGACAGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CCA 90 bp TCTGCTCAAATGTCACTTTATCAGGAGGCCTCTTCTGTCCACCCTAGGGTTACTGCACCGCTGTCTCCTTaGGGTGGGAGATGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: SAQMSLYQEASSVHPRVTAPLSP*GGRCLQ
Trigger: TTGGAGGCATCTCCCACCCCAAGGAGACAGCGGTGC...AGTAACCCTAGGGTGGACAGAAGAGGCCTCCTGATAAAGTGACATTTGAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CCA 90 bp GCCTCTGCCTCCCAGTTCAAGCGGTTCTCCTGCCCCATCCTCCCAAGTAGCTGGACAGGTATTGCCTGTTaGGTTTCCTCTGAAACTTTA +
Preference number: 4 (lower is better)
Translates to: ASASQFKRFSCPILPSSWTGIAC*VSSETL
Trigger: TAAAGTTTCAGAGGAAACCCAACAGGCAATACCTGT...CCAGCTACTTGGGAGGATGGGGCAGGAGAACCGCTTGAACTGGGAGGCAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CCA 90 bp GAGATAAGTGAGGTGGCCAAGTTCCTGACTGTGCACTTAAAGGGGAGGGTCCTGCTTTCACTTTCAGGCTaGTGCCCTGTCCAGACAGGT +
Preference number: 4 (lower is better)
Translates to: EISEVAKFLTVHLKGRVLLSLSG*CPVQTG
Trigger: ACCTGTCTGGACAGGGCACCAGCCTGAAAGTGAAAG...CAGGACCCTCCCCTTTAAGTGCACAGTCAGGAACTTGGCCACCTCACTTATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CCA 90 bp GAGATAAGTGAGGTGGCCAAGTTCCTGACTGTGCACTTAAAGGGGAGGGTCCTGGGGGCACAGATGGTCTaGCTGGTTGAGTTCAGAGAT +
Preference number: 4 (lower is better)
Translates to: EISEVAKFLTVHLKGRVLGAQMV*LVEFRD
Trigger: ATCTCTGAACTCAACCAGCCAGACCATCTGTGCCCC...CAGGACCCTCCCCTTTAAGTGCACAGTCAGGAACTTGGCCACCTCACTTATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR TCA 90 bp GCATTCGCTGTTCCTTGTACTTTTCAGCTCTTCCCCTGGGTATCTGCAGGGCTCTCCCTTCACAAGCACTaGGGTGCCTTCATCCGATTT +
Preference number: 4 (lower is better)
Translates to: AFAVPCTFQLFPWVSAGLSLHKH*GAFIRF
Trigger: AAATCGGATGAAGGCACCTCAGTGCTTGTGAAGGGA...GAGCCCTGCAGATACCCAGGGGAAGAGCTGAAAAGTACAAGGAACAGCGAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR TCA 90 bp CTCCAAGCACTGTGCAGTTCAGAAAGACAGTGTCTCCAGTGGTCCCCAACACCATCCCTTCACAAGCACTaGGGTGCCTTCATCCGATTT +
Preference number: 4 (lower is better)
Translates to: LQALCSSERQCLQWSPTPSLHKH*GAFIRF
Trigger: AAATCGGATGAAGGCACCTCAGTGCTTGTGAAGGGA...TGGTGTTGGGGACCACTGGAGACACTGTCTTTCTGAACTGCACAGTGCTTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608073.1
CDS-3UTR TCA 90 bp ACAGACATCTCCTGGGAAGAAGACTCTGAGTTGGATGTTGGAGGCCAAGAAGGATCTAGGAGTTTGTCATaGGGCCTGGGGGCACCTAGA +
Preference number: 4 (lower is better)
Translates to: TDISWEEDSELDVGGQEGSRSLS*GLGAPR
Trigger: TCTAGGTGCCCCCAGGCCTCATGACAAACTCCTAGA...TCCTTCTTGGCCTCCAACATCCAACTCAGAGTCTTCTTCCCAGGAGATGTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR TCA 90 bp CTTCAGGTGTCTGCTCAAATGTCACTTTATCAGGAGGCCTCTTCTGTCCACCCTTCCTCTGCTCTCTTGTaGGTGTTGGAGTCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: LQVSAQMSLYQEASSVHPSSALL*VLESEA
Trigger: CGCCTCAGACTCCAACACTCACAAGAGAGCAGAGGA...AGGGTGGACAGAAGAGGCCTCCTGATAAAGTGACATTTGAGCAGACACCTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp CACCCTAGGGTTACTTGCTCATTGTCTGTCTTCTCTCGGGAGGAGGTAAGCTCTGACTTGGGGCTCCTCTaGTCTCTTGTGAGTGTTGGA +
Preference number: 4 (lower is better)
Translates to: HPRVTCSLSVFSREEVSSDLGLL*SLVSVG
Trigger: TCCAACACTCACAAGAGAGCAGAGGAGCCCCAAGTC...AGAGCTTACCTCCTCCCGAGAGAAGACAGACAATGAGCAAGTAACCCTAGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp AGAGGCTGTCTGTATGCTGCTGTGGTGGAGATAACTGGTTATCCCCTGATATCTTCATTCCTGCTGCTCTaGCCAGAGGCATCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: RGCLYAAVVEITGYPLISSFLLL*PEASEG
Trigger: CCCCTCAGATGCCTCTGGGCAGAGCAGCAGGAATGA...AGATATCAGGGGATAACCAGTTATCTCCACCACAGCAGCATACAGACAGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR GCA 90 bp GCCAGGCATTCTGCTTGGTGTTTGCTGTTCTTGTGCAAGTCAAGCACGCTCCTGCCTTGGGGTGGGAGATaGCTCCAAAGTTGTAAATGG +
Preference number: 4 (lower is better)
Translates to: ARHSAWCLLFLCKSSTLLPWGGR*LQSCKW
Trigger: CCATTTACAACTTTGGAGGCATCTCCCACCCCAAGG...CAGGAGCGTGCTTGACTTGCACAAGAACAGCAAACACCAAGCAGAATGCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp CTGTTCTTGTGCAAGTCAAGCACGCTCCTGCCTCAGGACCTTTGCATTCGCTGTTCACTTTCAGGCTGGTaGCCTGTCCAGACAGGTATT +
Preference number: 4 (lower is better)
Translates to: LFLCKSSTLLPQDLCIRCSLSGW*PVQTGI
Trigger: AATACCTGTCTGGACAGGGCACCAGCCTGAAAGTGA...ACAGCGAATGCAAAGGTCCTGAGGCAGGAGCGTGCTTGACTTGCACAAGAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp ACCTCCTTCAGGTGTCTGCTCAAATGTCACTTTATCAGGAGGCCTCTTCTGTCCGGACAAGGCAGTTTCTaGGTCTCTTGGCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: TSFRCLLKCHFIRRPLLSGQGSF*VSWPQL
Trigger: CAGCTGTGGCCAAGAGACGCAGAAACTGCCTTGTCC...GGACAGAAGAGGCCTCCTGATAAAGTGACATTTGAGCAGACACCTGAAGGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp TTCCTTGTACTTTTCAGCTCTTCCCCTGGGTATCTGCAGGGCTCTCTTCCTCACACCTCCATGCTTTCCTaGTGTTTCAGCTTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: FLVLFSSSPGYLQGSLPHTSMLS*CFSFPW
Trigger: CCACGGGAAGCTGAAACAGCAGGAAAGCATGGAGGT...GTGAGGAAGAGAGCCCTGCAGATACCCAGGGGAAGAGCTGAAAAGTACAAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp ATGTCACTTTATCAGGAGGCCTCTTCTGTCCACCCTAGGGTTACTTGCTCATTGTCCCCCAGCACCAGCTaGTGCTGGCTCGTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: MSLYQEASSVHPRVTCSLSPSTS*CWLVLS
Trigger: TGAAAGAACGAGCCAGCAGCAGCTGGTGCTGGGGGA...CAATGAGCAAGTAACCCTAGGGTGGACAGAAGAGGCCTCCTGATAAAGTGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481731.5
CDS-3UTR GCA 90 bp GCATTCGCTGTTCCTTGTACTTTTCAGCTCTTCCCCTGGGTATCTGCAGGGCTCGGTCAAAGGGTTTCCTaGTTTTGTGTCTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: AFAVPCTFQLFPWVSAGLGQRVS*FCVWAV
Trigger: CACAGCCCAGACACAAAAGCAGGAAACCCTTTGACC...GAGCCCTGCAGATACCCAGGGGAAGAGCTGAAAAGTACAAGGAACAGCGAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000486775.5
CDS-3UTR CCA 90 bp GAGATAAGTGAGGTGGCCAAGTTCCTGACTGTGCACTTAAAGGGGAGGGTCCTGGGTTCTGATGTCCGTTaGATCATGGGCATTACCCCA +
Preference number: 4 (lower is better)
Translates to: EISEVAKFLTVHLKGRVLGSDVR*IMGITP
Trigger: TGGGGTAATGCCCATGATCCAACGGACATCAGAACC...CAGGACCCTCCCCTTTAAGTGCACAGTCAGGAACTTGGCCACCTCACTTATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CCA 90 bp GCCAGGCATTCTGCTTGGTGTTTGCTGTTCTTGTGCAAGTCAAGCACGCTCCTGGGTTCTGATGTCCGTTaGATCATGGGCATTACCCCA +
Preference number: 4 (lower is better)
Translates to: ARHSAWCLLFLCKSSTLLGSDVR*IMGITP
Trigger: TGGGGTAATGCCCATGATCCAACGGACATCAGAACC...CAGGAGCGTGCTTGACTTGCACAAGAACAGCAAACACCAAGCAGAATGCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CCA 90 bp CACCTCCTTCAGGTGTCTGCTCAAATGTCACTTTATCAGGAGGCCTCTTCTGTCCCCAACACCAATTCCTaGGGCTGGATGATCCACAGG +
Preference number: 4 (lower is better)
Translates to: HLLQVSAQMSLYQEASSVPNTNS*GWMIHR
Trigger: CCTGTGGATCATCCAGCCCCAGGAATTGGTGTTGGG...GACAGAAGAGGCCTCCTGATAAAGTGACATTTGAGCAGACACCTGAAGGAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CCA 90 bp TTCCGAGACTGTGTGCTTCATCTCTGCCATGTATGTAGTTCAGGCGTTTACGGGGCTGTCTCCTTGGGGTaGGAGATGCCTCCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: FRDCVLHLCHVCSSGVYGAVSLG*EMPPKL
Trigger: CAACTTTGGAGGCATCTCCCACCCCAAGGAGACAGC...CCCGTAAACGCCTGAACTACATACATGGCAGAGATGAAGCACACAGTCTCGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CCA 90 bp TTCGCTGTTCCTTGTACTTTTCAGCTCTTCCCCTGGGTATCTGCAGGGCTCTCTCTTTCACTTTCAGGCTaGTGCCCTGTCCAGACAGGT +
Preference number: 4 (lower is better)
Translates to: FAVPCTFQLFPWVSAGLSLSLSG*CPVQTG
Trigger: ACCTGTCTGGACAGGGCACCAGCCTGAAAGTGAAAG...AGAGAGCCCTGCAGATACCCAGGGGAAGAGCTGAAAAGTACAAGGAACAGCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CCA 90 bp TTCCTTGTACTTTTCAGCTCTTCCCCTGGGTATCTGCAGGGCTCTCTTCCTCACAGCACCAGCTGCTGCTaGCTCGTTCTTTCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: FLVLFSSSPGYLQGSLPHSTSCC*LVLSEC
Trigger: ACACTCTGAAAGAACGAGCCAGCAGCAGCTGGTGCT...GTGAGGAAGAGAGCCCTGCAGATACCCAGGGGAAGAGCTGAAAAGTACAAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481731.5
CDS-3UTR CCA 90 bp CTGTTCCTTGTACTTTTCAGCTCTTCCCCTGGGTATCTGCAGGGCTCTCTTCCTGCAACACAAGGCTGTTaGTGCAATAGGAAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LFLVLFSSSPGYLQGSLPATQGC*CNRKEP
Trigger: GGGCTCCTTCCTATTGCACCAACAGCCTTGTGTTGC...AGGAAGAGAGCCCTGCAGATACCCAGGGGAAGAGCTGAAAAGTACAAGGAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486775.5
CDS-3UTR TCA 90 bp TTCACAAGCACTGAGGTGCCTTCATCCGATTTCATTTCTGAGTGTTCACTCAAACTGCCCAGAGGCATCTaGGGGGACAAGGACCAGTGC +
Preference number: 4 (lower is better)
Translates to: FTSTEVPSSDFISECSLKLPRGI*GDKDQC
Trigger: GCACTGGTCCTTGTCCCCTCAGATGCCTCTGGGCAG...TTTGAGTGAACACTCAGAAATGAAATCGGATGAAGGCACCTCAGTGCTTGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608073.1
CDS-3UTR TCA 90 bp GAATCCTGGGTCTCAATACCAGGGAGTCTCTGTATTGCTTGGCCTGCTGATGGTATTTCCTGTTGGTCCTaGGTGCTCACCTTCACCCAT +
Preference number: 4 (lower is better)
Translates to: ESWVSIPGSLCIAWPADGISCWS*VLTFTH
Trigger: ATGGGTGAAGGTGAGCACTCAGGACCAACAGGAAAT...ACCATCAGCAGGCCAAGCAATACAGAGACTCCCTGGTATTGAGACCCAGGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR TCA 90 bp TGGACCAAAACCAGATGTAGGGATCTAGGAGTTTGTCATGAGGCCTGGGGGCACACAATTCAGTGGTTCTaGTGTCCGTTGGATCATGGG +
Preference number: 4 (lower is better)
Translates to: WTKTRCRDLGVCHEAWGHTIQWF*CPLDHG
Trigger: CCCATGATCCAACGGACATCAGAACCACTGAATTGT...GTGCCCCCAGGCCTCATGACAAACTCCTAGATCCCTACATCTGGTTTTGGTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR TCA 90 bp AGGCCAGGCATTCTGCTTGGTGTTTGCTGTTCTTGTGCAAGTCAAGCACGCTCCACAATTCAGTGGTTCTaGTGTCCGTTGGATCATGGG +
Preference number: 4 (lower is better)
Translates to: RPGILLGVCCSCASQARSTIQWF*CPLDHG
Trigger: CCCATGATCCAACGGACATCAGAACCACTGAATTGT...GGAGCGTGCTTGACTTGCACAAGAACAGCAAACACCAAGCAGAATGCCTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR TCA 90 bp CTGTTCCTTGTACTTTTCAGCTCTTCCCCTGGGTATCTGCAGGGCTCTCTTCCTCAGTGTGCTCCCTGGTaGCATTGTGGATATAGATGG +
Preference number: 4 (lower is better)
Translates to: LFLVLFSSSPGYLQGSLPQCAPW*HCGYRW
Trigger: CCATCTATATCCACAATGTCACCAGGGAGCACACTG...AGGAAGAGAGCCCTGCAGATACCCAGGGGAAGAGCTGAAAAGTACAAGGAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR TCA 90 bp CTGGAGGTAGGGAAATGGTTGAGGAGCCCTGGCTCCTCTCCAACTCAGAGGGTCATCCGATTTCATTTCTaGGTGTTCACTCAAACCATC +
Preference number: 4 (lower is better)
Translates to: LEVGKWLRSPGSSPTQRVIRFHF*VFTQTI
Trigger: GATGGTTTGAGTGAACACTCAGAAATGAAATCGGAT...GACCCTCTGAGTTGGAGAGGAGCCAGGGCTCCTCAACCATTTCCCTACCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR TCA 90 bp GAATCCTGGGTCTCAATACCAGGGAGTCTCTGTATTGCTTGGCCTGCTGATGGTTCCCTTCACAAGCACTaGGGTGCCTTCATCCGATTT +
Preference number: 4 (lower is better)
Translates to: ESWVSIPGSLCIAWPADGSLHKH*GAFIRF
Trigger: AAATCGGATGAAGGCACCTCAGTGCTTGTGAAGGGA...ACCATCAGCAGGCCAAGCAATACAGAGACTCCCTGGTATTGAGACCCAGGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR TCA 90 bp ACAGACATCTCCTGGGAAGAAGACTCTGAGTTGGATGTTGGAGGCCAAGAAGGACTGGTCTCAAACTCCTaGACTCAGGTGATCCACCCA +
Preference number: 4 (lower is better)
Translates to: TDISWEEDSELDVGGQEGLVSNS*TQVIHP
Trigger: TGGGTGGATCACCTGAGTTCAGGAGTTTGAGACCAG...TCCTTCTTGGCCTCCAACATCCAACTCAGAGTCTTCTTCCCAGGAGATGTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR TCA 90 bp CAGGAGGCCTCTTCTGTCCACCCTAGGGTTACTTGCTCATTGTCTGTCTTCTCTCGTTTCAGGATTCAATaGGGGTGGCTCCAGTTAGTG +
Preference number: 4 (lower is better)
Translates to: QEASSVHPRVTCSLSVFSRFRIQ*GWLQLV
Trigger: CACTAACTGGAGCCACCCTCATTGAATCCTGAAACG...AGAGAAGACAGACAATGAGCAAGTAACCCTAGGGTGGACAGAAGAGGCCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481731.5
CDS-3UTR TCA 90 bp CTTGGTGTTTGCTGTTCTTGTGCAAGTCAAGCACGCTCCTGCCTCAGGACCTTTGGAGGAGGTAAGCTCTaGGAGAGCAGACTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: LGVCCSCASQARSCLRTFGGGKL*ESRLLF
Trigger: AAACAGAAGTCTGCTCTCTCAGAGCTTACCTCCTCC...AAAGGTCCTGAGGCAGGAGCGTGCTTGACTTGCACAAGAACAGCAAACACCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR TCA 90 bp CAGGAGGCCTCTTCTGTCCACCCTAGGGTTACTTGCTCATTGTCTGTCTTCTCTGGAGGAGGTAAGCTCTaGGAGAGCAGACTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: QEASSVHPRVTCSLSVFSGGGKL*ESRLLF
Trigger: AAACAGAAGTCTGCTCTCTCAGAGCTTACCTCCTCC...AGAGAAGACAGACAATGAGCAAGTAACCCTAGGGTGGACAGAAGAGGCCTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR TCA 90 bp TCTTCTGTCCACCCTAGGGTTACTTGCTCATTGTCTGTCTTCTCTCGGGAGGAGAAACATGATTGTAAGTaGCGCTCCCTCATGCCCCTG +
Preference number: 4 (lower is better)
Translates to: SSVHPRVTCSLSVFSREEKHDCK*RSLMPL
Trigger: CAGGGGCATGAGGGAGCGTCACTTACAATCATGTTT...CTCCTCCCGAGAGAAGACAGACAATGAGCAAGTAACCCTAGGGTGGACAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481731.5
CDS-3UTR GCA 90 bp TGTTTGCTGTTCTTGTGCAAGTCAAGCACGCTCCTGCCTCAGGACCTTTGCATTGACTTGGGGCTCCTCTaGTCTCTTGTGAGTGTTGGA +
Preference number: 4 (lower is better)
Translates to: CLLFLCKSSTLLPQDLCIDLGLL*SLVSVG
Trigger: TCCAACACTCACAAGAGAGCAGAGGAGCCCCAAGTC...AATGCAAAGGTCCTGAGGCAGGAGCGTGCTTGACTTGCACAAGAACAGCAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp AGGCCAGGCATTCTGCTTGGTGTTTGCTGTTCTTGTGCAAGTCAAGCACGCTCCTTATCATACCATCAGTaGAGGAGCCGACCACCATAC +
Preference number: 4 (lower is better)
Translates to: RPGILLGVCCSCASQARSLSYHQ*RSRPPY
Trigger: GTATGGTGGTCGGCTCCTGCACTGATGGTATGATAA...GGAGCGTGCTTGACTTGCACAAGAACAGCAAACACCAAGCAGAATGCCTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp CAGGGTCCCCAGCTCCCTTCACAAGCACTGAGGTGCCTTCATCCGATTTCATTTTTATCATACCATCAGTaGAGGAGCCGACCACCATAC +
Preference number: 4 (lower is better)
Translates to: QGPQLPSQALRCLHPISFLSYHQ*RSRPPY
Trigger: GTATGGTGGTCGGCTCCTGCACTGATGGTATGATAA...AAATGAAATCGGATGAAGGCACCTCAGTGCTTGTGAAGGGAGCTGGGGACCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608073.1
CDS-3UTR GCA 90 bp ACTGGAGGTAGGGAAATGGTTGAGGAGCCCTGGCTCCTCTCCAACTCAGAGGGTTCACAAGCACTGAGGTaGCTTCATCCGATTTCATTT +
Preference number: 4 (lower is better)
Translates to: TGGREMVEEPWLLSNSEGSQALR*LHPISF
Trigger: AAATGAAATCGGATGAAGGCACCTCAGTGCTTGTGA...ACCCTCTGAGTTGGAGAGGAGCCAGGGCTCCTCAACCATTTCCCTACCTCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR GCA 90 bp CAGATTTCCGAGACTGTGTGCTTCATCTCTGCCATGTATGTAGTTCAGGCGTTTTCATTGTTGGAGGCCTaGACCGCTGTCTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: QISETVCFISAMYVVQAFSLLEA*TAVSLG
Trigger: CCCCAAGGAGACAGCGGTGCAGGCCTCCAACAATGA...AAACGCCTGAACTACATACATGGCAGAGATGAAGCACACAGTCTCGGAAATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp TGGACCAAAACCAGATGTAGGGATCTAGGAGTTTGTCATGAGGCCTGGGGGCACACAGTAATAGGTGCCTaGATCCTCACTGGAGACGTT +
Preference number: 4 (lower is better)
Translates to: WTKTRCRDLGVCHEAWGHTVIGA*ILTGDV
Trigger: AACGTCTCCAGTGAGGATGCAGGCACCTATTACTGT...GTGCCCCCAGGCCTCATGACAAACTCCTAGATCCCTACATCTGGTTTTGGTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR GCA 90 bp TGTGGTGGAGATAACTGGTTATCCCCTGATATCTGCCATCTGGTTTCTCTAGTGGCTCACTGCAGCCTCTaGCTCCCAGTTCAAGCGGTT +
Preference number: 4 (lower is better)
Translates to: CGGDNWLSPDICHLVSLVAHCSL*LPVQAV
Trigger: AACCGCTTGAACTGGGAGGCAGAGGCTGCAGTGAGC...CACTAGAGAAACCAGATGGCAGATATCAGGGGATAACCAGTTATCTCCACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR GCA 90 bp TCTGCTCAAATGTCACTTTATCAGGAGGCCTCTTCTGTCCACCCTAGGGTTACTGGACAAGGCAGTTTCTaGGTCTCTTGGCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: SAQMSLYQEASSVHPRVTGQGSF*VSWPQL
Trigger: CAGCTGTGGCCAAGAGACGCAGAAACTGCCTTGTCC...AGTAACCCTAGGGTGGACAGAAGAGGCCTCCTGATAAAGTGACATTTGAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp TATGTAGTTCAGGCGTTTACGGGGTCTAATACAGGCCAGGCATTCTGCTTGGTGACACAAGGCTGTTGGTaGAATAGGAAGGAGCCCGGT +
Preference number: 4 (lower is better)
Translates to: YVVQAFTGSNTGQAFCLVTQGCW*NRKEPG
Trigger: ACCGGGCTCCTTCCTATTGCACCAACAGCCTTGTGT...CACCAAGCAGAATGCCTGGCCTGTATTAGACCCCGTAAACGCCTGAACTACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486775.5
CDS-3UTR CCA 90 bp CTTCAGGTGTCTGCTCAAATGTCACTTTATCAGGAGGCCTCTTCTGTCCACCCTACATCGTGGAGCACATaGCATCTTCTGTGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: LQVSAQMSLYQEASSVHPTSWST*HLLWSP
Trigger: TGGGGACCACAGAAGATGCCATGTGCTCCACGATGT...AGGGTGGACAGAAGAGGCCTCCTGATAAAGTGACATTTGAGCAGACACCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CCA 90 bp ATCTCTGCCATGTATGTAGTTCAGGCGTTTACGGGGTCTAATACAGGCCAGGCAACCAATTCCTGGGGCTaGATGATCCACAGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: ISAMYVVQAFTGSNTGQATNSWG*MIHRSG
Trigger: ACCAGACCTGTGGATCATCCAGCCCCAGGAATTGGT...TGCCTGGCCTGTATTAGACCCCGTAAACGCCTGAACTACATACATGGCAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CCA 90 bp TCTGCTCAAATGTCACTTTATCAGGAGGCCTCTTCTGTCCACCCTAGGGTTACTCCCAACACCAATTCCTaGGGCTGGATGATCCACAGG +
Preference number: 4 (lower is better)
Translates to: SAQMSLYQEASSVHPRVTPNTNS*GWMIHR
Trigger: CCTGTGGATCATCCAGCCCCAGGAATTGGTGTTGGG...AGTAACCCTAGGGTGGACAGAAGAGGCCTCCTGATAAAGTGACATTTGAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CCA 90 bp AGGTGTCTGCTCAAATGTCACTTTATCAGGAGGCCTCTTCTGTCCACCCTAGGGAGACAGTGTCTCCAGTaGTCCCCAACACCAATTCCT +
Preference number: 4 (lower is better)
Translates to: RCLLKCHFIRRPLLSTLGRQCLQ*SPTPIP
Trigger: AGGAATTGGTGTTGGGGACCACTGGAGACACTGTCT...CCCTAGGGTGGACAGAAGAGGCCTCCTGATAAAGTGACATTTGAGCAGACACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CCA 90 bp CCAAGCACTGTGCAGTTCAGAAAGACAGTGTCTCCAGTGGTCCCCAACACCAATAGACAGTGTCTCCAGTaGTCCCCAACACCAATTCCT +
Preference number: 4 (lower is better)
Translates to: PSTVQFRKTVSPVVPNTNRQCLQ*SPTPIP
Trigger: AGGAATTGGTGTTGGGGACCACTGGAGACACTGTCT...ATTGGTGTTGGGGACCACTGGAGACACTGTCTTTCTGAACTGCACAGTGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608073.1
CDS-3UTR CCA 90 bp AGGGTTACTTGCTCATTGTCTGTCTTCTCTCGGGAGGAGGTAAGCTCTGAGAGACTCCAAAGTTGTAAATaGCCTCCCGGCTCAGACCAG +
Preference number: 4 (lower is better)
Translates to: RVTCSLSVFSREEVSSERLQSCK*PPGSDQ
Trigger: CTGGTCTGAGCCGGGAGGCCATTTACAACTTTGGAG...TCTCTCAGAGCTTACCTCCTCCCGAGAGAAGACAGACAATGAGCAAGTAACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CCA 90 bp ATCTCTGCCATGTATGTAGTTCAGGCGTTTACGGGGTCTAATACAGGCCAGGCACTCCAAAGTTGTAAATaGCCTCCCGGCTCAGACCAG +
Preference number: 4 (lower is better)
Translates to: ISAMYVVQAFTGSNTGQALQSCK*PPGSDQ
Trigger: CTGGTCTGAGCCGGGAGGCCATTTACAACTTTGGAG...TGCCTGGCCTGTATTAGACCCCGTAAACGCCTGAACTACATACATGGCAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CCA 90 bp ACTGGAGGTAGGGAAATGGTTGAGGAGCCCTGGCTCCTCTCCAACTCAGAGGGTTGCCTGGTCTTGAATTaGTTCTTACACAATGCAGAG +
Preference number: 4 (lower is better)
Translates to: TGGREMVEEPWLLSNSEGCLVLN*FLHNAE
Trigger: CTCTGCATTGTGTAAGAACCAATTCAAGACCAGGCA...ACCCTCTGAGTTGGAGAGGAGCCAGGGCTCCTCAACCATTTCCCTACCTCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
3UTR CAA 72 bp CTTGTGCAAGTCAAGCACGCTCCTGCCTCAGGACCTTaGCATTCGCTGTTCCTTGTACTTTTCAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LVQVKHAPASGP*HSLFLVLFSSS
Trigger: GGAAGAGCTGAAAAGTACAAGGAACAGCGAATGCAAAGGTCCTGAGGCAGGAGCGTGCTTGACTTGCACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR TCA 90 bp CACCCTAGGGTTACTTGCTCATTGTCTGTCTTCTCTCGGGAGGAGGTAAGCTCTACAATTCAGTGGTTCTaGTGTCCGTTGGATCATGGG +
Preference number: 4 (lower is better)
Translates to: HPRVTCSLSVFSREEVSSTIQWF*CPLDHG
Trigger: CCCATGATCCAACGGACATCAGAACCACTGAATTGT...AGAGCTTACCTCCTCCCGAGAGAAGACAGACAATGAGCAAGTAACCCTAGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR TCA 90 bp CTTCAGGTGTCTGCTCAAATGTCACTTTATCAGGAGGCCTCTTCTGTCCACCCTCAGTGTGCTCCCTGGTaGCATTGTGGATATAGATGG +
Preference number: 4 (lower is better)
Translates to: LQVSAQMSLYQEASSVHPQCAPW*HCGYRW
Trigger: CCATCTATATCCACAATGTCACCAGGGAGCACACTG...AGGGTGGACAGAAGAGGCCTCCTGATAAAGTGACATTTGAGCAGACACCTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR TCA 90 bp ATCTCTGCCATGTATGTAGTTCAGGCGTTTACGGGGTCTAATACAGGCCAGGCATCCCTTCACAAGCACTaGGGTGCCTTCATCCGATTT +
Preference number: 4 (lower is better)
Translates to: ISAMYVVQAFTGSNTGQASLHKH*GAFIRF
Trigger: AAATCGGATGAAGGCACCTCAGTGCTTGTGAAGGGA...TGCCTGGCCTGTATTAGACCCCGTAAACGCCTGAACTACATACATGGCAGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR TCA 90 bp TTCGCTGTTCCTTGTACTTTTCAGCTCTTCCCCTGGGTATCTGCAGGGCTCTCTTTGCAGGTTCACTGGTaGATTCTGCCTCTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: FAVPCTFQLFPWVSAGLSLQVHW*ILPLWK
Trigger: CTTCCAAAGAGGCAGAATTCACCAGTGAACCTGCAA...AGAGAGCCCTGCAGATACCCAGGGGAAGAGCTGAAAAGTACAAGGAACAGCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR TCA 90 bp GAATCCTGGGTCTCAATACCAGGGAGTCTCTGTATTGCTTGGCCTGCTGATGGTGATGGTCTGGCTGGTTaGGTTCAGAGATTCTTACAG +
Preference number: 4 (lower is better)
Translates to: ESWVSIPGSLCIAWPADGDGLAG*VQRFLQ
Trigger: CTGTAAGAATCTCTGAACTCAACCAGCCAGACCATC...ACCATCAGCAGGCCAAGCAATACAGAGACTCCCTGGTATTGAGACCCAGGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR TCA 90 bp GAATCCTGGGTCTCAATACCAGGGAGTCTCTGTATTGCTTGGCCTGCTGATGGTTATTGCTTGGCCTGCTaGTGGTCAACTTTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: ESWVSIPGSLCIAWPADGYCLAC*WSTFWL
Trigger: CAACCAGAAAGTTGACCATCAGCAGGCCAAGCAATA...ACCATCAGCAGGCCAAGCAATACAGAGACTCCCTGGTATTGAGACCCAGGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR TCA 90 bp ACAGACATCTCCTGGGAAGAAGACTCTGAGTTGGATGTTGGAGGCCAAGAAGGAATCCTGGATGTTCCGTaGTGGGAAGGGACTCTGATT +
Preference number: 4 (lower is better)
Translates to: TDISWEEDSELDVGGQEGILDVP*WEGTLI
Trigger: AATCAGAGTCCCTTCCCATCACGGAACATCCAGGAT...TCCTTCTTGGCCTCCAACATCCAACTCAGAGTCTTCTTCCCAGGAGATGTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR TCA 90 bp ATGTCACTTTATCAGGAGGCCTCTTCTGTCCACCCTAGGGTTACTTGCTCATTGTCTTTCTCAGCACACTaGTTAGGGCCTGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: MSLYQEASSVHPRVTCSLSFSAH*LGPGTE
Trigger: CTCTGTGCCAGGCCCTAATCAGTGTGCTGAGAAAGA...CAATGAGCAAGTAACCCTAGGGTGGACAGAAGAGGCCTCCTGATAAAGTGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481731.5
CDS-3UTR TCA 90 bp CCAGGCATTCTGCTTGGTGTTTGCTGTTCTTGTGCAAGTCAAGCACGCTCCTGCTGTGTGTCTCTTGGCTaGAATCTTTCTTCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: PGILLGVCCSCASQARSCCVSLG*NLSSKQ
Trigger: CTGCTTGGAAGAAAGATTTCAGCCAAGAGACACACA...GCAGGAGCGTGCTTGACTTGCACAAGAACAGCAAACACCAAGCAGAATGCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481731.5
CDS-3UTR GCA 90 bp CTGTTCCTTGTACTTTTCAGCTCTTCCCCTGGGTATCTGCAGGGCTCTCTTCCTTTATCATACCATCAGTaGAGGAGCCGACCACCATAC +
Preference number: 4 (lower is better)
Translates to: LFLVLFSSSPGYLQGSLPLSYHQ*RSRPPY
Trigger: GTATGGTGGTCGGCTCCTGCACTGATGGTATGATAA...AGGAAGAGAGCCCTGCAGATACCCAGGGGAAGAGCTGAAAAGTACAAGGAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp CAGGAGGCCTCTTCTGTCCACCCTAGGGTTACTTGCTCATTGTCTGTCTTCTCTCGTCTCCAAGCACTGTaGAGTTCAGAAAGACAGTGT +
Preference number: 4 (lower is better)
Translates to: QEASSVHPRVTCSLSVFSRLQAL*SSERQC
Trigger: ACACTGTCTTTCTGAACTGCACAGTGCTTGGAGACG...AGAGAAGACAGACAATGAGCAAGTAACCCTAGGGTGGACAGAAGAGGCCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp CTGTTCTTGTGCAAGTCAAGCACGCTCCTGCCTCAGGACCTTTGCATTCGCTGTTTACACAGTAATAGGTaGCTGCATCCTCACTGGAGA +
Preference number: 4 (lower is better)
Translates to: LFLCKSSTLLPQDLCIRCLHSNR*LHPHWR
Trigger: TCTCCAGTGAGGATGCAGGCACCTATTACTGTGTAA...ACAGCGAATGCAAAGGTCCTGAGGCAGGAGCGTGCTTGACTTGCACAAGAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp GCATTCGCTGTTCCTTGTACTTTTCAGCTCTTCCCCTGGGTATCTGCAGGGCTCTGGAGACATCTCAGTTaGAGGTTCACTGGTGAATTC +
Preference number: 4 (lower is better)
Translates to: AFAVPCTFQLFPWVSAGLWRHLS*RFTGEF
Trigger: GAATTCACCAGTGAACCTGCAACTGAGATGTCTCCA...GAGCCCTGCAGATACCCAGGGGAAGAGCTGAAAAGTACAAGGAACAGCGAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp TTCCTTGTACTTTTCAGCTCTTCCCCTGGGTATCTGCAGGGCTCTCTTCCTCACTCTCTTGGCCACAGCTaGTTGGGGAAGTGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: FLVLFSSSPGYLQGSLPHSLGHS*LGKCFH
Trigger: ATGAAAACACTTCCCCAAGCAGCTGTGGCCAAGAGA...GTGAGGAAGAGAGCCCTGCAGATACCCAGGGGAAGAGCTGAAAAGTACAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CCA 90 bp TGTGGTGGAGATAACTGGTTATCCCCTGATATCTGCCATCTGGTTTCTCTAGTGCCCAACACCAATTCCTaGGGCTGGATGATCCACAGG +
Preference number: 4 (lower is better)
Translates to: CGGDNWLSPDICHLVSLVPNTNS*GWMIHR
Trigger: CCTGTGGATCATCCAGCCCCAGGAATTGGTGTTGGG...CACTAGAGAAACCAGATGGCAGATATCAGGGGATAACCAGTTATCTCCACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CCA 90 bp AGTTCAGAGATTCTTACAGACATCTCCTGGGAAGAAGACTCTGAGTTGGATGTTGTTTGTCATGAGGCCTaGGGGCACCTAGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SSEILTDISWEEDSELDVVCHEA*GHLEAG
Trigger: CCCAGCCTCTAGGTGCCCCCAGGCCTCATGACAAAC...AACATCCAACTCAGAGTCTTCTTCCCAGGAGATGTCTGTAAGAATCTCTGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CCA 90 bp TGGACCAAAACCAGATGTAGGGATCTAGGAGTTTGTCATGAGGCCTGGGGGCACGGGAATTTCACTAGGTaGACCAAAACCAGATGTAGG +
Preference number: 4 (lower is better)
Translates to: WTKTRCRDLGVCHEAWGHGNFTR*TKTRCR
Trigger: CCTACATCTGGTTTTGGTCCACCTAGTGAAATTCCC...GTGCCCCCAGGCCTCATGACAAACTCCTAGATCCCTACATCTGGTTTTGGTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CCA 90 bp AGAGGCTGTCTGTATGCTGCTGTGGTGGAGATAACTGGTTATCCCCTGATATCTATGGAGGGGCACAGATaGTCTGGCTGGTTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: RGCLYAAVVEITGYPLISMEGHR*SGWLSS
Trigger: TGAACTCAACCAGCCAGACCATCTGTGCCCCTCCAT...AGATATCAGGGGATAACCAGTTATCTCCACCACAGCAGCATACAGACAGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CCA 90 bp CTGGAGGTAGGGAAATGGTTGAGGAGCCCTGGCTCCTCTCCAACTCAGAGGGTCCTGGTTGATTTCCACTaGTTTAAGCCACTGTTATTT +
Preference number: 4 (lower is better)
Translates to: LEVGKWLRSPGSSPTQRVLVDFH*FKPLLF
Trigger: AAATAACAGTGGCTTAAACCAGTGGAAATCAACCAG...GACCCTCTGAGTTGGAGAGGAGCCAGGGCTCCTCAACCATTTCCCTACCTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CCA 90 bp TGGACCAAAACCAGATGTAGGGATCTAGGAGTTTGTCATGAGGCCTGGGGGCACAGTCTCTGTATTGCTTaGCCTGCTGATGGTCAACTT +
Preference number: 4 (lower is better)
Translates to: WTKTRCRDLGVCHEAWGHSLCIA*PADGQL
Trigger: AAGTTGACCATCAGCAGGCCAAGCAATACAGAGACT...GTGCCCCCAGGCCTCATGACAAACTCCTAGATCCCTACATCTGGTTTTGGTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CCA 90 bp TTCCTTGTACTTTTCAGCTCTTCCCCTGGGTATCTGCAGGGCTCTCTTCCTCACTTGGCCACAGCTGCTTaGGGAAGTGTTTTCATTGCA +
Preference number: 4 (lower is better)
Translates to: FLVLFSSSPGYLQGSLPHLATAA*GSVFIA
Trigger: TGCAATGAAAACACTTCCCCAAGCAGCTGTGGCCAA...GTGAGGAAGAGAGCCCTGCAGATACCCAGGGGAAGAGCTGAAAAGTACAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CCA 90 bp TTCGCTGTTCCTTGTACTTTTCAGCTCTTCCCCTGGGTATCTGCAGGGCTCTCTTCACTGCAAACCTGTTaGAGACATCTCAGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: FAVPCTFQLFPWVSAGLSSLQTC*RHLSCR
Trigger: CCTGCAACTGAGATGTCTCCAACAGGTTTGCAGTGA...AGAGAGCCCTGCAGATACCCAGGGGAAGAGCTGAAAAGTACAAGGAACAGCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CCA 90 bp TCTTCTGTCCACCCTAGGGTTACTTGCTCATTGTCTGTCTTCTCTCGGGAGGAGTCACTGCAAACCTGTTaGAGACATCTCAGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: SSVHPRVTCSLSVFSREESLQTC*RHLSCR
Trigger: CCTGCAACTGAGATGTCTCCAACAGGTTTGCAGTGA...CTCCTCCCGAGAGAAGACAGACAATGAGCAAGTAACCCTAGGGTGGACAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp TTCCGAGACTGTGTGCTTCATCTCTGCCATGTATGTAGTTCAGGCGTTTACGGGCCTGTTGGTCCTGAGTaGTCACCTTCACCCATTTTA +
Preference number: 4 (lower is better)
Translates to: FRDCVLHLCHVCSSGVYGPVGPE*SPSPIL
Trigger: TAAAATGGGTGAAGGTGAGCACTCAGGACCAACAGG...CCCGTAAACGCCTGAACTACATACATGGCAGAGATGAAGCACACAGTCTCGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp GGTCCCCAGCTCCCTTCACAAGCACTGAGGTGCCTTCATCCGATTTCATTTCTGTCACAAGCACTGAGGTaGCTTCATCCGATTTCATTT +
Preference number: 4 (lower is better)
Translates to: GPQLPSQALRCLHPISFLSQALR*LHPISF
Trigger: AAATGAAATCGGATGAAGGCACCTCAGTGCTTGTGA...CAGAAATGAAATCGGATGAAGGCACCTCAGTGCTTGTGAAGGGAGCTGGGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608073.1
CDS-3UTR GCA 90 bp ATCTCTGCCATGTATGTAGTTCAGGCGTTTACGGGGTCTAATACAGGCCAGGCACGTCTCCAAGCACTGTaGAGTTCAGAAAGACAGTGT +
Preference number: 4 (lower is better)
Translates to: ISAMYVVQAFTGSNTGQARLQAL*SSERQC
Trigger: ACACTGTCTTTCTGAACTGCACAGTGCTTGGAGACG...TGCCTGGCCTGTATTAGACCCCGTAAACGCCTGAACTACATACATGGCAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp TTCATCTCTGCCATGTATGTAGTTCAGGCGTTTACGGGGTCTAATACAGGCCAGCCTTGGGGTGGGAGATaGCTCCAAAGTTGTAAATGG +
Preference number: 4 (lower is better)
Translates to: FISAMYVVQAFTGSNTGQPWGGR*LQSCKW
Trigger: CCATTTACAACTTTGGAGGCATCTCCCACCCCAAGG...CTGGCCTGTATTAGACCCCGTAAACGCCTGAACTACATACATGGCAGAGATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp TATGTAGTTCAGGCGTTTACGGGGTCTAATACAGGCCAGGCATTCTGCTTGGTGACAGTAATAGGTGCCTaGATCCTCACTGGAGACGTT +
Preference number: 4 (lower is better)
Translates to: YVVQAFTGSNTGQAFCLVTVIGA*ILTGDV
Trigger: AACGTCTCCAGTGAGGATGCAGGCACCTATTACTGT...CACCAAGCAGAATGCCTGGCCTGTATTAGACCCCGTAAACGCCTGAACTACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp CACCTCCTTCAGGTGTCTGCTCAAATGTCACTTTATCAGGAGGCCTCTTCTGTCACAGTAATAGGTGCCTaGATCCTCACTGGAGACGTT +
Preference number: 4 (lower is better)
Translates to: HLLQVSAQMSLYQEASSVTVIGA*ILTGDV
Trigger: AACGTCTCCAGTGAGGATGCAGGCACCTATTACTGT...GACAGAAGAGGCCTCCTGATAAAGTGACATTTGAGCAGACACCTGAAGGAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp TCTGCTCAAATGTCACTTTATCAGGAGGCCTCTTCTGTCCACCCTAGGGTTACTTCACTTTCAGGCTGGTaGCCTGTCCAGACAGGTATT +
Preference number: 4 (lower is better)
Translates to: SAQMSLYQEASSVHPRVTSLSGW*PVQTGI
Trigger: AATACCTGTCTGGACAGGGCACCAGCCTGAAAGTGA...AGTAACCCTAGGGTGGACAGAAGAGGCCTCCTGATAAAGTGACATTTGAGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp TGGACCAAAACCAGATGTAGGGATCTAGGAGTTTGTCATGAGGCCTGGGGGCACGGAAGAGGTAGATTTTaGTTTCACTTTCAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: WTKTRCRDLGVCHEAWGHGRGRF*FHFQAG
Trigger: ACCAGCCTGAAAGTGAAAGCAAAATCTACCTCTTCC...GTGCCCCCAGGCCTCATGACAAACTCCTAGATCCCTACATCTGGTTTTGGTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR GCA 90 bp CTTCAGGTGTCTGCTCAAATGTCACTTTATCAGGAGGCCTCTTCTGTCCACCCTTCTCTTGGCCACAGCTaGTTGGGGAAGTGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: LQVSAQMSLYQEASSVHPSLGHS*LGKCFH
Trigger: ATGAAAACACTTCCCCAAGCAGCTGTGGCCAAGAGA...AGGGTGGACAGAAGAGGCCTCCTGATAAAGTGACATTTGAGCAGACACCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CCA 90 bp TGTGGTGGAGATAACTGGTTATCCCCTGATATCTGCCATCTGGTTTCTCTAGTGACATCGTGGAGCACATaGCATCTTCTGTGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: CGGDNWLSPDICHLVSLVTSWST*HLLWSP
Trigger: TGGGGACCACAGAAGATGCCATGTGCTCCACGATGT...CACTAGAGAAACCAGATGGCAGATATCAGGGGATAACCAGTTATCTCCACCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CCA 90 bp TGTGGTGGAGATAACTGGTTATCCCCTGATATCTGCCATCTGGTTTCTCTAGTGACCAATTCCTGGGGCTaGATGATCCACAGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: CGGDNWLSPDICHLVSLVTNSWG*MIHRSG
Trigger: ACCAGACCTGTGGATCATCCAGCCCCAGGAATTGGT...CACTAGAGAAACCAGATGGCAGATATCAGGGGATAACCAGTTATCTCCACCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CCA 90 bp ACTGTGTGCTTCATCTCTGCCATGTATGTAGTTCAGGCGTTTACGGGGTCTAATCTTTCACTTTCAGGCTaGTGCCCTGTCCAGACAGGT +
Preference number: 4 (lower is better)
Translates to: TVCFISAMYVVQAFTGSNLSLSG*CPVQTG
Trigger: ACCTGTCTGGACAGGGCACCAGCCTGAAAGTGAAAG...ATTAGACCCCGTAAACGCCTGAACTACATACATGGCAGAGATGAAGCACACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CCA 90 bp AGGGTTACTTGCTCATTGTCTGTCTTCTCTCGGGAGGAGGTAAGCTCTGAGAGATTGGCCACAGCTGCTTaGGGAAGTGTTTTCATTGCA +
Preference number: 4 (lower is better)
Translates to: RVTCSLSVFSREEVSSERLATAA*GSVFIA
Trigger: TGCAATGAAAACACTTCCCCAAGCAGCTGTGGCCAA...TCTCTCAGAGCTTACCTCCTCCCGAGAGAAGACAGACAATGAGCAAGTAACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
3UTR CAA 72 bp ATTCTTACAGACATCTCCTGGGAAGAAGACTCTGAGTaGGATGTTGGAGGCCAAGAAGGATGTAGCGAGGTG +
Preference number: 4 (lower is better)
Translates to: ILTDISWEEDSE*DVGGQEGCSEV
Trigger: CACCTCGCTACATCCTTCTTGGCCTCCAACATCCAACTCAGAGTCTTCTTCCCAGGAGATGTCTGTAAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR TCA 90 bp GCTGTTCCTTGTACTTTTCAGCTCTTCCCCTGGGTATCTGCAGGGCTCTCTTCCATCCGATTTCATTTCTaGGTGTTCACTCAAACCATC +
Preference number: 4 (lower is better)
Translates to: AVPCTFQLFPWVSAGLSSIRFHF*VFTQTI
Trigger: GATGGTTTGAGTGAACACTCAGAAATGAAATCGGAT...GGAAGAGAGCCCTGCAGATACCCAGGGGAAGAGCTGAAAAGTACAAGGAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR TCA 90 bp TTCATCTCTGCCATGTATGTAGTTCAGGCGTTTACGGGGTCTAATACAGGCCAGTTGCAGGTTCACTGGTaGATTCTGCCTCTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: FISAMYVVQAFTGSNTGQLQVHW*ILPLWK
Trigger: CTTCCAAAGAGGCAGAATTCACCAGTGAACCTGCAA...CTGGCCTGTATTAGACCCCGTAAACGCCTGAACTACATACATGGCAGAGATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp CAGGAGGCCTCTTCTGTCCACCCTAGGGTTACTTGCTCATTGTCTGTCTTCTCTTCACAAGCACTGAGGTaGCTTCATCCGATTTCATTT +
Preference number: 4 (lower is better)
Translates to: QEASSVHPRVTCSLSVFSSQALR*LHPISF
Trigger: AAATGAAATCGGATGAAGGCACCTCAGTGCTTGTGA...AGAGAAGACAGACAATGAGCAAGTAACCCTAGGGTGGACAGAAGAGGCCTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp ATCTCTGCCATGTATGTAGTTCAGGCGTTTACGGGGTCTAATACAGGCCAGGCATTACACAGTAATAGGTaGCTGCATCCTCACTGGAGA +
Preference number: 4 (lower is better)
Translates to: ISAMYVVQAFTGSNTGQALHSNR*LHPHWR
Trigger: TCTCCAGTGAGGATGCAGGCACCTATTACTGTGTAA...TGCCTGGCCTGTATTAGACCCCGTAAACGCCTGAACTACATACATGGCAGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp CTGTTCCTTGTACTTTTCAGCTCTTCCCCTGGGTATCTGCAGGGCTCTCTTCCTGGAAGAGGTAGATTTTaGTTTCACTTTCAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LFLVLFSSSPGYLQGSLPGRGRF*FHFQAG
Trigger: ACCAGCCTGAAAGTGAAAGCAAAATCTACCTCTTCC...AGGAAGAGAGCCCTGCAGATACCCAGGGGAAGAGCTGAAAAGTACAAGGAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp AGTTCAGAGATTCTTACAGACATCTCCTGGGAAGAAGACTCTGAGTTGGATGTTTTCAAGCGGTTCTCCTaGCCCATCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: SSEILTDISWEEDSELDVFKRFS*PILPSS
Trigger: GCTACTTGGGAGGATGGGGCAGGAGAACCGCTTGAA...AACATCCAACTCAGAGTCTTCTTCCCAGGAGATGTCTGTAAGAATCTCTGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR GCA 90 bp AGCACACTGATTAGGGCCTGGCACAGAGTCAGCTTTCAACCACGTTTCAGGATTGGGAAGTGTTTTCATTaGAGCAACACAAGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: STLIRAWHRVSFQPRFRIGKCFH*SNTRLL
Trigger: CAACAGCCTTGTGTTGCTGCAATGAAAACACTTCCC...AATCCTGAAACGTGGTTGAAAGCTGACTCTGTGCCAGGCCCTAATCAGTGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481731.5
CDS-3UTR GCA 90 bp TTCCGAGACTGTGTGCTTCATCTCTGCCATGTATGTAGTTCAGGCGTTTACGGGGGGAAGTGTTTTCATTaGAGCAACACAAGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: FRDCVLHLCHVCSSGVYGGKCFH*SNTRLL
Trigger: CAACAGCCTTGTGTTGCTGCAATGAAAACACTTCCC...CCCGTAAACGCCTGAACTACATACATGGCAGAGATGAAGCACACAGTCTCGGAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CCA 90 bp CAGATTTCCGAGACTGTGTGCTTCATCTCTGCCATGTATGTAGTTCAGGCGTTTGGTTCTGATGTCCGTTaGATCATGGGCATTACCCCA +
Preference number: 4 (lower is better)
Translates to: QISETVCFISAMYVVQAFGSDVR*IMGITP
Trigger: TGGGGTAATGCCCATGATCCAACGGACATCAGAACC...AAACGCCTGAACTACATACATGGCAGAGATGAAGCACACAGTCTCGGAAATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CCA 90 bp CAGATTTCCGAGACTGTGTGCTTCATCTCTGCCATGTATGTAGTTCAGGCGTTTAGACAGTGTCTCCAGTaGTCCCCAACACCAATTCCT +
Preference number: 4 (lower is better)
Translates to: QISETVCFISAMYVVQAFRQCLQ*SPTPIP
Trigger: AGGAATTGGTGTTGGGGACCACTGGAGACACTGTCT...AAACGCCTGAACTACATACATGGCAGAGATGAAGCACACAGTCTCGGAAATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CCA 90 bp AGTTCAGAGATTCTTACAGACATCTCCTGGGAAGAAGACTCTGAGTTGGATGTTATGGTTGAGGAGCCCTaGCTCCTCTCCAACTCAGAG +
Preference number: 4 (lower is better)
Translates to: SSEILTDISWEEDSELDVMVEEP*LLSNSE
Trigger: CTCTGAGTTGGAGAGGAGCCAGGGCTCCTCAACCAT...AACATCCAACTCAGAGTCTTCTTCCCAGGAGATGTCTGTAAGAATCTCTGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CCA 90 bp ACAGACATCTCCTGGGAAGAAGACTCTGAGTTGGATGTTGGAGGCCAAGAAGGATCCACATTAGTATCCTaGATGTTCCGTGATGGGAAG +
Preference number: 4 (lower is better)
Translates to: TDISWEEDSELDVGGQEGSTLVS*MFRDGK
Trigger: CTTCCCATCACGGAACATCCAGGATACTAATGTGGA...TCCTTCTTGGCCTCCAACATCCAACTCAGAGTCTTCTTCCCAGGAGATGTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CCA 90 bp CCAGGCATTCTGCTTGGTGTTTGCTGTTCTTGTGCAAGTCAAGCACGCTCCTGCTTGCTGTGTGTCTCTTaGCTGAAATCTTTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: PGILLGVCCSCASQARSCLLCVS*LKSFFQ
Trigger: TTGGAAGAAAGATTTCAGCCAAGAGACACACAGCAA...GCAGGAGCGTGCTTGACTTGCACAAGAACAGCAAACACCAAGCAGAATGCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481731.5
CDS-3UTR CCA 90 bp TTCATCTCTGCCATGTATGTAGTTCAGGCGTTTACGGGGTCTAATACAGGCCAGTCCTGCTTTTGTGTCTaGGCTGTGATTCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: FISAMYVVQAFTGSNTGQSCFCV*AVIPVV
Trigger: GACTACAGGAATCACAGCCCAGACACAAAAGCAGGA...CTGGCCTGTATTAGACCCCGTAAACGCCTGAACTACATACATGGCAGAGATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486775.5
CDS-3UTR TCA 90 bp ACTGTGCAGTTCAGAAAGACAGTGTCTCCAGTGGTCCCCAACACCAATTCCTGGATCCGATTTCATTTCTaGGTGTTCACTCAAACCATC +
Preference number: 4 (lower is better)
Translates to: TVQFRKTVSPVVPNTNSWIRFHF*VFTQTI
Trigger: GATGGTTTGAGTGAACACTCAGAAATGAAATCGGAT...CCAGGAATTGGTGTTGGGGACCACTGGAGACACTGTCTTTCTGAACTGCACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608073.1
CDS-3UTR TCA 90 bp TCTGCTCAAATGTCACTTTATCAGGAGGCCTCTTCTGTCCACCCTAGGGTTACTTTTGCAGAAGAATGCTaGAGTCATTGTTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: SAQMSLYQEASSVHPRVTFAEEC*SHCWRP
Trigger: AGGCCTCCAACAATGACTTCAGCATTCTTCTGCAAA...AGTAACCCTAGGGTGGACAGAAGAGGCCTCCTGATAAAGTGACATTTGAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR TCA 90 bp TGTGGTGGAGATAACTGGTTATCCCCTGATATCTGCCATCTGGTTTCTCTAGTGTTGCAGGTTCACTGGTaGATTCTGCCTCTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: CGGDNWLSPDICHLVSLVLQVHW*ILPLWK
Trigger: CTTCCAAAGAGGCAGAATTCACCAGTGAACCTGCAA...CACTAGAGAAACCAGATGGCAGATATCAGGGGATAACCAGTTATCTCCACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR GCA 90 bp CAGATTTCCGAGACTGTGTGCTTCATCTCTGCCATGTATGTAGTTCAGGCGTTTCCTGTTGGTCCTGAGTaGTCACCTTCACCCATTTTA +
Preference number: 4 (lower is better)
Translates to: QISETVCFISAMYVVQAFPVGPE*SPSPIL
Trigger: TAAAATGGGTGAAGGTGAGCACTCAGGACCAACAGG...AAACGCCTGAACTACATACATGGCAGAGATGAAGCACACAGTCTCGGAAATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp ACCTCCTTCAGGTGTCTGCTCAAATGTCACTTTATCAGGAGGCCTCTTCTGTCCGGAAGAGGTAGATTTTaGTTTCACTTTCAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: TSFRCLLKCHFIRRPLLSGRGRF*FHFQAG
Trigger: ACCAGCCTGAAAGTGAAAGCAAAATCTACCTCTTCC...GGACAGAAGAGGCCTCCTGATAAAGTGACATTTGAGCAGACACCTGAAGGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp CACCTCCTTCAGGTGTCTGCTCAAATGTCACTTTATCAGGAGGCCTCTTCTGTCTTCACTGGTGAATTCTaGCTCTTTGGAAGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: HLLQVSAQMSLYQEASSVFTGEF*LFGRGR
Trigger: TCTACCTCTTCCAAAGAGGCAGAATTCACCAGTGAA...GACAGAAGAGGCCTCCTGATAAAGTGACATTTGAGCAGACACCTGAAGGAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp AGAGGCTGTCTGTATGCTGCTGTGGTGGAGATAACTGGTTATCCCCTGATATCTTGGAGACATCTCAGTTaGAGGTTCACTGGTGAATTC +
Preference number: 4 (lower is better)
Translates to: RGCLYAAVVEITGYPLISWRHLS*RFTGEF
Trigger: GAATTCACCAGTGAACCTGCAACTGAGATGTCTCCA...AGATATCAGGGGATAACCAGTTATCTCCACCACAGCAGCATACAGACAGCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR GCA 90 bp TTCATCTCTGCCATGTATGTAGTTCAGGCGTTTACGGGGTCTAATACAGGCCAGTGGAGACATCTCAGTTaGAGGTTCACTGGTGAATTC +
Preference number: 4 (lower is better)
Translates to: FISAMYVVQAFTGSNTGQWRHLS*RFTGEF
Trigger: GAATTCACCAGTGAACCTGCAACTGAGATGTCTCCA...CTGGCCTGTATTAGACCCCGTAAACGCCTGAACTACATACATGGCAGAGATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp TGTGGTGGAGATAACTGGTTATCCCCTGATATCTGCCATCTGGTTTCTCTAGTGCTCACTCTTGACCCTTaGTCCATGCTAAGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: CGGDNWLSPDICHLVSLVLTLDP*SMLRCS
Trigger: TGAACACCTTAGCATGGAGCAAGGGTCAAGAGTGAG...CACTAGAGAAACCAGATGGCAGATATCAGGGGATAACCAGTTATCTCCACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CCA 90 bp TTCACAAGCACTGAGGTGCCTTCATCCGATTTCATTTCTGAGTGTTCACTCAAAACCAATTCCTGGGGCTaGATGATCCACAGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: FTSTEVPSSDFISECSLKTNSWG*MIHRSG
Trigger: ACCAGACCTGTGGATCATCCAGCCCCAGGAATTGGT...TTTGAGTGAACACTCAGAAATGAAATCGGATGAAGGCACCTCAGTGCTTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608073.1
CDS-3UTR CCA 90 bp CAGGAGGCCTCTTCTGTCCACCCTAGGGTTACTTGCTCATTGTCTGTCTTCTCTACAGGTATTGCCTGTTaGGTTTCCTCTGAAACTTTA +
Preference number: 4 (lower is better)
Translates to: QEASSVHPRVTCSLSVFSTGIAC*VSSETL
Trigger: TAAAGTTTCAGAGGAAACCCAACAGGCAATACCTGT...AGAGAAGACAGACAATGAGCAAGTAACCCTAGGGTGGACAGAAGAGGCCTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CCA 90 bp AGTTCAGAGATTCTTACAGACATCTCCTGGGAAGAAGACTCTGAGTTGGATGTTGGAGAAAGGTGTAGATaGAGGGGCACAGATGGTCTG +
Preference number: 4 (lower is better)
Translates to: SSEILTDISWEEDSELDVGERCR*RGTDGL
Trigger: CAGACCATCTGTGCCCCTCCATCTACACCTTTCTCC...AACATCCAACTCAGAGTCTTCTTCCCAGGAGATGTCTGTAAGAATCTCTGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CCA 90 bp AGTTCAGAGATTCTTACAGACATCTCCTGGGAAGAAGACTCTGAGTTGGATGTTGAAGGCAGGAAGGAGTaGGGAGAAAGGTGTAGATGG +
Preference number: 4 (lower is better)
Translates to: SSEILTDISWEEDSELDVEGRKE*GERCRW
Trigger: CCATCTACACCTTTCTCCCCACTCCTTCCTGCCTTC...AACATCCAACTCAGAGTCTTCTTCCCAGGAGATGTCTGTAAGAATCTCTGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR TCA 90 bp ACTGTGTGCTTCATCTCTGCCATGTATGTAGTTCAGGCGTTTACGGGGTCTAATTTTGCAGAAGAATGCTaGAGTCATTGTTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: TVCFISAMYVVQAFTGSNFAEEC*SHCWRP
Trigger: AGGCCTCCAACAATGACTTCAGCATTCTTCTGCAAA...ATTAGACCCCGTAAACGCCTGAACTACATACATGGCAGAGATGAAGCACACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR TCA 90 bp CAGATTTCCGAGACTGTGTGCTTCATCTCTGCCATGTATGTAGTTCAGGCGTTTAGGAGAACTGGAATTTaGACCTGCACAGCCAGATTT +
Preference number: 4 (lower is better)
Translates to: QISETVCFISAMYVVQAFRRTGI*TCTARF
Trigger: AAATCTGGCTGTGCAGGTTCAAATTCCAGTTCTCCT...AAACGCCTGAACTACATACATGGCAGAGATGAAGCACACAGTCTCGGAAATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp TGTGGTGGAGATAACTGGTTATCCCCTGATATCTGCCATCTGGTTTCTCTAGTGTTACACAGTAATAGGTaGCTGCATCCTCACTGGAGA +
Preference number: 4 (lower is better)
Translates to: CGGDNWLSPDICHLVSLVLHSNR*LHPHWR
Trigger: TCTCCAGTGAGGATGCAGGCACCTATTACTGTGTAA...CACTAGAGAAACCAGATGGCAGATATCAGGGGATAACCAGTTATCTCCACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR GCA 90 bp AGAGGCTGTCTGTATGCTGCTGTGGTGGAGATAACTGGTTATCCCCTGATATCTTTCACTGGTGAATTCTaGCTCTTTGGAAGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: RGCLYAAVVEITGYPLISFTGEF*LFGRGR
Trigger: TCTACCTCTTCCAAAGAGGCAGAATTCACCAGTGAA...AGATATCAGGGGATAACCAGTTATCTCCACCACAGCAGCATACAGACAGCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CCA 90 bp TTCCGAGACTGTGTGCTTCATCTCTGCCATGTATGTAGTTCAGGCGTTTACGGGACAGGTATTGCCTGTTaGGTTTCCTCTGAAACTTTA +
Preference number: 4 (lower is better)
Translates to: FRDCVLHLCHVCSSGVYGTGIAC*VSSETL
Trigger: TAAAGTTTCAGAGGAAACCCAACAGGCAATACCTGT...CCCGTAAACGCCTGAACTACATACATGGCAGAGATGAAGCACACAGTCTCGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR TCA 90 bp TCTGCTCAAATGTCACTTTATCAGGAGGCCTCTTCTGTCCACCCTAGGGTTACTATCCGATTTCATTTCTaGGTGTTCACTCAAACCATC +
Preference number: 4 (lower is better)
Translates to: SAQMSLYQEASSVHPRVTIRFHF*VFTQTI
Trigger: GATGGTTTGAGTGAACACTCAGAAATGAAATCGGAT...AGTAACCCTAGGGTGGACAGAAGAGGCCTCCTGATAAAGTGACATTTGAGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp ACTGTGTGCTTCATCTCTGCCATGTATGTAGTTCAGGCGTTTACGGGGTCTAATTCACAAGCACTGAGGTaGCTTCATCCGATTTCATTT +
Preference number: 4 (lower is better)
Translates to: TVCFISAMYVVQAFTGSNSQALR*LHPISF
Trigger: AAATGAAATCGGATGAAGGCACCTCAGTGCTTGTGA...ATTAGACCCCGTAAACGCCTGAACTACATACATGGCAGAGATGAAGCACACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp AGTTCAGAGATTCTTACAGACATCTCCTGGGAAGAAGACTCTGAGTTGGATGTTCGTCTCCAAGCACTGTaGAGTTCAGAAAGACAGTGT +
Preference number: 4 (lower is better)
Translates to: SSEILTDISWEEDSELDVRLQAL*SSERQC
Trigger: ACACTGTCTTTCTGAACTGCACAGTGCTTGGAGACG...AACATCCAACTCAGAGTCTTCTTCCCAGGAGATGTCTGTAAGAATCTCTGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR GCA 90 bp CAGATTTCCGAGACTGTGTGCTTCATCTCTGCCATGTATGTAGTTCAGGCGTTTTTCACTGGTGAATTCTaGCTCTTTGGAAGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: QISETVCFISAMYVVQAFFTGEF*LFGRGR
Trigger: TCTACCTCTTCCAAAGAGGCAGAATTCACCAGTGAA...AAACGCCTGAACTACATACATGGCAGAGATGAAGCACACAGTCTCGGAAATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR GCA 90 bp TGTGGTGGAGATAACTGGTTATCCCCTGATATCTGCCATCTGGTTTCTCTAGTGTTATCCCCTGATATCTaGCATCTGGTTTCTCTAGTG +
Preference number: 4 (lower is better)
Translates to: CGGDNWLSPDICHLVSLVLSPDI*HLVSLV
Trigger: CACTAGAGAAACCAGATGGCAGATATCAGGGGATAA...CACTAGAGAAACCAGATGGCAGATATCAGGGGATAACCAGTTATCTCCACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR GCA 90 bp ACCTCCTTCAGGTGTCTGCTCAAATGTCACTTTATCAGGAGGCCTCTTCTGTCCTTCTTCAATAAACTCTaGTACTTCACCTTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: TSFRCLLKCHFIRRPLLSFFNKL*YFTFAV
Trigger: CACAGCAAAGGTGAAGTAGCAGAGTTTATTGAAGAA...GGACAGAAGAGGCCTCCTGATAAAGTGACATTTGAGCAGACACCTGAAGGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481731.5
CDS-3UTR CCA 90 bp AGTTCAGAGATTCTTACAGACATCTCCTGGGAAGAAGACTCTGAGTTGGATGTTCTTACAGACATCTCCTaGGAAGAAGACTCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: SSEILTDISWEEDSELDVLTDIS*EEDSEL
Trigger: CAACTCAGAGTCTTCTTCCCAGGAGATGTCTGTAAG...AACATCCAACTCAGAGTCTTCTTCCCAGGAGATGTCTGTAAGAATCTCTGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS GCA 90 bp CCACCAGCATGGGGCCCTCGGGCTGTAGCACCTGCCAGTCATTCCTaGTGCTCTGCCCAGAGGCATCGTGTGCTGGGCCCTGCGTGCATG +
Preference number: 5 (lower is better)
Translates to: PPAWGPRAVAPASHS*CSAQRHRVLGPACM
Trigger: CATGCACGCAGGGCCCAGCACACGATGCCTCTGGGCAGAGCAGCAGGAATGACTGGCAGGTGCTACAGCCCGAGGGCCCCATGCTGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608747.1
CDS GCA 90 bp CCAGCATGGGGCCCTCGGGCTGTAGCACCTGCCAGTCATTCCTGCTaGTCTGCCCAGAGGCATCGTGTGCTGGGCCCTGCGTGCATGATG +
Preference number: 5 (lower is better)
Translates to: PAWGPRAVAPASHSC*SAQRHRVLGPACMM
Trigger: CATCATGCACGCAGGGCCCAGCACACGATGCCTCTGGGCAGAGCAGCAGGAATGACTGGCAGGTGCTACAGCCCGAGGGCCCCATGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608747.1
CDS GCA 90 bp CCACCAGCATGGGGCCCTCGGGCTGTAGCACCTGCCAGTCATTCCTaGTGCTCTGCCCAGAGGCATCTGAGGGGACAAGGACCAGTGCCA +
Preference number: 5 (lower is better)
Translates to: PPAWGPRAVAPASHS*CSAQRHLRGQGPVP
Trigger: TGGCACTGGTCCTTGTCCCCTCAGATGCCTCTGGGCAGAGCAGCAGGAATGACTGGCAGGTGCTACAGCCCGAGGGCCCCATGCTGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359801.8
ENST00000381630.2
ENST00000444444.2
ENST00000481731.5
ENST00000486775.5
ENST00000608073.1
ENST00000609796.1
CDS GCA 90 bp CCTGGGAGCATTCTTGGTGGCAGGTTAGCCCCAGGAGTCTGGGACTaGTCCCTTCCCATGACCAAGCCATTCATGGCCCCCTTGCCTGTG +
Preference number: 5 (lower is better)
Translates to: PGSILGGRLAPGVWD*SLPMTKPFMAPLPV
Trigger: CACAGGCAAGGGGGCCATGAATGGCTTGGTCATGGGAAGGGAGCAGTCCCAGACTCCTGGGGCTAACCTGCCACCAAGAATGCTCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381630.2
CDS CCA 90 bp GCTCCTCTGCTCTCTTGTGAGTGTTGGAGTCTGAGGCGGGGCCCGTaGACAAGGCAGTTTCTGCGTCTCTTGGCCACAGCTGCTTGGGGA +
Preference number: 5 (lower is better)
Translates to: APLLSCECWSLRRGP*TRQFLRLLATAAWG
Trigger: TCCCCAAGCAGCTGTGGCCAAGAGACGCAGAAACTGCCTTGTCCACGGGCCCCGCCTCAGACTCCAACACTCACAAGAGAGCAGAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000444444.2
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CAA 90 bp CTGGAGGTAGGGAAATGGTTGAGGAGCCCTGGCTCCTCTCCAACTCAGAGGGTCTGCACCGCTGTCTCCTaGGGGTGGGAGATGCCTCCA +
Preference number: 5 (lower is better)
Translates to: LEVGKWLRSPGSSPTQRVCTAVS*GWEMPP
Trigger: TGGAGGCATCTCCCACCCCAAGGAGACAGCGGTGCA...GACCCTCTGAGTTGGAGAGGAGCCAGGGCTCCTCAACCATTTCCCTACCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS GCA 90 bp AAGGTGTTCATGGCTCCTGCTGGGCCTGTGGTCTTGACATCTTCTTaGCCAGGGCTCCTCCGAGAGGTAGCCAGGGCCAGTAGGAGTGCA +
Preference number: 5 (lower is better)
Translates to: KVFMAPAGPVVLTSS*PGLLREVARASRSA
Trigger: TGCACTCCTACTGGCCCTGGCTACCTCTCGGAGGAGCCCTGGGCAAGAAGATGTCAAGACCACAGGCCCAGCAGGAGCCATGAACACCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359801.8
ENST00000444444.2
CDS TCA 90 bp AGTTGTAAATGGCCTCCCGGCTCAGACCAGCTCCCTGGAACCACCTaGTGGGTCCAGGGGGACCGTCTCCAAGCACTGTGCAGTTCAGAA +
Preference number: 5 (lower is better)
Translates to: SCKWPPGSDQLPGTT*WVQGDRLQALCSSE
Trigger: TTCTGAACTGCACAGTGCTTGGAGACGGTCCCCCTGGACCCATCAGGTGGTTCCAGGGAGCTGGTCTGAGCCGGGAGGCCATTTACAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359801.8
ENST00000381630.2
ENST00000444444.2
ENST00000481731.5
ENST00000486775.5
ENST00000608747.1
CDS GCA 90 bp AGTCATTGTTGGAGGCCTGCACCGCTGTCTCCTTGGGGTGGGAGATaGCTCCAAAGTTGTAAATGGCCTCCCGGCTCAGACCAGCTCCCT +
Preference number: 5 (lower is better)
Translates to: SHCWRPAPLSPWGGR*LQSCKWPPGSDQLP
Trigger: AGGGAGCTGGTCTGAGCCGGGAGGCCATTTACAACTTTGGAGGCATCTCCCACCCCAAGGAGACAGCGGTGCAGGCCTCCAACAATGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359801.8
ENST00000381630.2
ENST00000444444.2
ENST00000481731.5
ENST00000486775.5
ENST00000608747.1
CDS CCA 90 bp CCACCATACACCTCAGTAGAAGTGTCTCACCTTCTGCCACCAGCATaGGGCCCTCGGGCTGTAGCACCTGCCAGTCATTCCTGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: PPYTSVEVSHLLPPA*GPRAVAPASHSCCS
Trigger: AGAGCAGCAGGAATGACTGGCAGGTGCTACAGCCCGAGGGCCCCATGCTGGTGGCAGAAGGTGAGACACTTCTACTGAGGTGTATGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359801.8
ENST00000481731.5
ENST00000486775.5
ENST00000608073.1
ENST00000608747.1
ENST00000609796.1
CDS-3UTR CAA 90 bp GCATTCGCTGTTCCTTGTACTTTTCAGCTCTTCCCCTGGGTATCTGCAGGGCTCTGCACCGCTGTCTCCTaGGGGTGGGAGATGCCTCCA +
Preference number: 5 (lower is better)
Translates to: AFAVPCTFQLFPWVSAGLCTAVS*GWEMPP
Trigger: TGGAGGCATCTCCCACCCCAAGGAGACAGCGGTGCA...GAGCCCTGCAGATACCCAGGGGAAGAGCTGAAAAGTACAAGGAACAGCGAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CAA 90 bp GCCAGGCATTCTGCTTGGTGTTTGCTGTTCTTGTGCAAGTCAAGCACGCTCCTGTGCACCGCTGTCTCCTaGGGGTGGGAGATGCCTCCA +
Preference number: 5 (lower is better)
Translates to: ARHSAWCLLFLCKSSTLLCTAVS*GWEMPP
Trigger: TGGAGGCATCTCCCACCCCAAGGAGACAGCGGTGCA...CAGGAGCGTGCTTGACTTGCACAAGAACAGCAAACACCAAGCAGAATGCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CAA 90 bp CTGGAGGTAGGGAAATGGTTGAGGAGCCCTGGCTCCTCTCCAACTCAGAGGGTCCAACCAGGAGGCCTGTaGGAGACATCTCAGTTGCAG +
Preference number: 5 (lower is better)
Translates to: LEVGKWLRSPGSSPTQRVQPGGL*ETSQLQ
Trigger: CTGCAACTGAGATGTCTCCAACAGGCCTCCTGGTTG...GACCCTCTGAGTTGGAGAGGAGCCAGGGCTCCTCAACCATTTCCCTACCTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CAA 90 bp GCCTCAGGGTTAAAGGCAGGTGTGTCTGACTCCTGGGCATGCACACTCTTCCCCCTAGCTAGCTGGGCATaGAACTCAGGTGTCCCACAG +
Preference number: 5 (lower is better)
Translates to: ASGLKAGVSDSWACTLFPLASWA*NSGVPQ
Trigger: CTGTGGGACACCTGAGTTCAATGCCCAGCTAGCTAG...GGGGAAGAGTGTGCATGCCCAGGAGTCAGACACACCTGCCTTTAACCCTGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS CCA 90 bp CAGTTCAGAAAGACAGTGTCTCCAGTGGTCCCCAACACCAATTCCTaGGGCTGGATGATCCACAGGTCTGGTTCAGGGTCCCCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: QFRKTVSPVVPNTNS*GWMIHRSGSGSPAP
Trigger: AGGAGCTGGGGACCCTGAACCAGACCTGTGGATCATCCAGCCCCAGGAATTGGTGTTGGGGACCACTGGAGACACTGTCTTTCTGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381630.2
ENST00000444444.2
ENST00000608747.1
CDS CCA 90 bp TTCATGGCCCCCTTGCCTGTGGGGGACTCATTGACTCCACTGAGGTaGGTACGCTCACCTGTTGGAGACATCTCAGTTGCAGGTTCACTG +
Preference number: 5 (lower is better)
Translates to: FMAPLPVGDSLTPLR*VRSPVGDISVAGSL
Trigger: CAGTGAACCTGCAACTGAGATGTCTCCAACAGGTGAGCGTACCCACCTCAGTGGAGTCAATGAGTCCCCCACAGGCAAGGGGGCCATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381630.2
CDS-3UTR CAA 90 bp GCCAGGCATTCTGCTTGGTGTTTGCTGTTCTTGTGCAAGTCAAGCACGCTCCTGTGTGGTCCCCAAGACTaGGGGCTCCTCTGCTCTCTT +
Preference number: 5 (lower is better)
Translates to: ARHSAWCLLFLCKSSTLLCGPQD*GLLCSL
Trigger: AAGAGAGCAGAGGAGCCCCAAGTCTTGGGGACCACA...CAGGAGCGTGCTTGACTTGCACAAGAACAGCAAACACCAAGCAGAATGCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CAA 90 bp TGGACCAAAACCAGATGTAGGGATCTAGGAGTTTGTCATGAGGCCTGGGGGCACGGTCTTGACATCTTCTaGCCCAGGGCTCCTCCGAGA +
Preference number: 5 (lower is better)
Translates to: WTKTRCRDLGVCHEAWGHGLDIF*PRAPPR
Trigger: TCTCGGAGGAGCCCTGGGCAAGAAGATGTCAAGACC...GTGCCCCCAGGCCTCATGACAAACTCCTAGATCCCTACATCTGGTTTTGGTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CAA 90 bp CTGGAGGTAGGGAAATGGTTGAGGAGCCCTGGCTCCTCTCCAACTCAGAGGGTCTTGCAGCTGGGCGCATaGCTGCCAGAAATAAAGACT +
Preference number: 5 (lower is better)
Translates to: LEVGKWLRSPGSSPTQRVLQLGA*LPEIKT
Trigger: AGTCTTTATTTCTGGCAGCAATGCGCCCAGCTGCAA...GACCCTCTGAGTTGGAGAGGAGCCAGGGCTCCTCAACCATTTCCCTACCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CAA 90 bp CTGGAGGTAGGGAAATGGTTGAGGAGCCCTGGCTCCTCTCCAACTCAGAGGGTCTTCTCTAGTGAAAACTaGCAGCTGGGCGCATTGCTG +
Preference number: 5 (lower is better)
Translates to: LEVGKWLRSPGSSPTQRVFSSEN*QLGALL
Trigger: CAGCAATGCGCCCAGCTGCAAGTTTTCACTAGAGAA...GACCCTCTGAGTTGGAGAGGAGCCAGGGCTCCTCAACCATTTCCCTACCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS TCA 90 bp AATAGGTGCCTGCATCCTCACTGGAGACGTTTTGCAGAAGAATGCTaGAGTCATTGTTGGAGGCCTGCACCGCTGTCTCCTTGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: NRCLHPHWRRFAEEC*SHCWRPAPLSPWGG
Trigger: CCCACCCCAAGGAGACAGCGGTGCAGGCCTCCAACAATGACTTCAGCATTCTTCTGCAAAACGTCTCCAGTGAGGATGCAGGCACCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359801.8
ENST00000381630.2
ENST00000444444.2
ENST00000481731.5
ENST00000486775.5
CDS CCA 90 bp AACATGGTTCTCTGGGGTCCTAGTTCTGCAGTTGAGATGAAGTCCTaGGAGCATTCTTGGTGGCAGGTTAGCCCCAGGAGTCTGGGACTG +
Preference number: 5 (lower is better)
Translates to: NMVLWGPSSAVEMKS*EHSWWQVSPRSLGL
Trigger: CAGTCCCAGACTCCTGGGGCTAACCTGCCACCAAGAATGCTCCCAGGACTTCATCTCAACTGCAGAACTAGGACCCCAGAGAACCATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381630.2
CDS-3UTR CAA 90 bp TCCAAGCACTGTGCAGTTCAGAAAGACAGTGTCTCCAGTGGTCCCCAACACCAATGTGGTCCCCAAGACTaGGGGCTCCTCTGCTCTCTT +
Preference number: 5 (lower is better)
Translates to: SKHCAVQKDSVSSGPQHQCGPQD*GLLCSL
Trigger: AAGAGAGCAGAGGAGCCCCAAGTCTTGGGGACCACA...TTGGTGTTGGGGACCACTGGAGACACTGTCTTTCTGAACTGCACAGTGCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000608073.1
CDS-3UTR CAA 90 bp GCCTCAGGGTTAAAGGCAGGTGTGTCTGACTCCTGGGCATGCACACTCTTCCCCCTCACTGGAGACGTTTaGCAGAAGAATGCTGAAGTC +
Preference number: 5 (lower is better)
Translates to: ASGLKAGVSDSWACTLFPLTGDV*QKNAEV
Trigger: GACTTCAGCATTCTTCTGCAAAACGTCTCCAGTGAG...GGGGAAGAGTGTGCATGCCCAGGAGTCAGACACACCTGCCTTTAACCCTGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CAA 90 bp CTGGAGGTAGGGAAATGGTTGAGGAGCCCTGGCTCCTCTCCAACTCAGAGGGTCGAAGAAGACTCTGAGTaGGATGTTGGAGGCCAAGAA +
Preference number: 5 (lower is better)
Translates to: LEVGKWLRSPGSSPTQRVEEDSE*DVGGQE
Trigger: TTCTTGGCCTCCAACATCCAACTCAGAGTCTTCTTC...GACCCTCTGAGTTGGAGAGGAGCCAGGGCTCCTCAACCATTTCCCTACCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CAA 90 bp GCCTCTGCCTCCCAGTTCAAGCGGTTCTCCTGCCCCATCCTCCCAAGTAGCTGGTGGTCAACTTTCTGGTaGATTTCCACTGGTTTAAGC +
Preference number: 5 (lower is better)
Translates to: ASASQFKRFSCPILPSSWWSTFW*ISTGLS
Trigger: GCTTAAACCAGTGGAAATCAACCAGAAAGTTGACCA...CCAGCTACTTGGGAGGATGGGGCAGGAGAACCGCTTGAACTGGGAGGCAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS TCA 90 bp CTGTGCAGGGAAACAGACTGGAGCAAATGTGTGGTCTGCAGGGCCTaGTCCTTACCCTTCACAAGCACTGAGGTGCCTTCATCCGATTTC +
Preference number: 5 (lower is better)
Translates to: LCRETDWSKCVVCRA*SLPFTSTEVPSSDF
Trigger: GAAATCGGATGAAGGCACCTCAGTGCTTGTGAAGGGTAAGGATCAGGCCCTGCAGACCACACATTTGCTCCAGTCTGTTTCCCTGCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609796.1
CDS GCA 90 bp CATCCAGGAGGCTTAGCTACAAAGCCATGTTCTCCAGTGTCGCTGTaGATAGCCTCACAGTGTGTCCCTACACTCAGAATCACAGGGAGC +
Preference number: 5 (lower is better)
Translates to: HPGGLATKPCSPVSL*IASQCVPTLRITGS
Trigger: GCTCCCTGTGATTCTGAGTGTAGGGACACACTGTGAGGCTATGCACAGCGACACTGGAGAACATGGCTTTGTAGCTAAGCCTCCTGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381630.2
CDS CCA 90 bp GTGGATAAAGGTGACTGTGCAGGGAAACAGACTGGAGCAAATGTGTaGTCTGCAGGGCCTGATCCTTACCCTTCACAAGCACTGAGGTGC +
Preference number: 5 (lower is better)
Translates to: VDKGDCAGKQTGANV*SAGPDPYPSQALRC
Trigger: GCACCTCAGTGCTTGTGAAGGGTAAGGATCAGGCCCTGCAGACCACACATTTGCTCCAGTCTGTTTCCCTGCACAGTCACCTTTATCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609796.1
CDS-3UTR CAA 90 bp ATCTCTGCCATGTATGTAGTTCAGGCGTTTACGGGGTCTAATACAGGCCAGGCATGTGGTCCCCAAGACTaGGGGCTCCTCTGCTCTCTT +
Preference number: 5 (lower is better)
Translates to: ISAMYVVQAFTGSNTGQACGPQD*GLLCSL
Trigger: AAGAGAGCAGAGGAGCCCCAAGTCTTGGGGACCACA...TGCCTGGCCTGTATTAGACCCCGTAAACGCCTGAACTACATACATGGCAGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CAA 90 bp TCTTCTGTCCACCCTAGGGTTACTTGCTCATTGTCTGTCTTCTCTCGGGAGGAGATGCTGAAGTCATTGTaGGAGGCCTGCACCGCTGTC +
Preference number: 5 (lower is better)
Translates to: SSVHPRVTCSLSVFSREEMLKSL*EACTAV
Trigger: GACAGCGGTGCAGGCCTCCAACAATGACTTCAGCAT...CTCCTCCCGAGAGAAGACAGACAATGAGCAAGTAACCCTAGGGTGGACAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CAA 90 bp TGGACCAAAACCAGATGTAGGGATCTAGGAGTTTGTCATGAGGCCTGGGGGCACAGAATGCTGAAGTCATaGTTGGAGGCCTGCACCGCT +
Preference number: 5 (lower is better)
Translates to: WTKTRCRDLGVCHEAWGHRMLKS*LEACTA
Trigger: AGCGGTGCAGGCCTCCAACAATGACTTCAGCATTCT...GTGCCCCCAGGCCTCATGACAAACTCCTAGATCCCTACATCTGGTTTTGGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CAA 90 bp AGGCCAGGCATTCTGCTTGGTGTTTGCTGTTCTTGTGCAAGTCAAGCACGCTCCCTTGGCCACAGCTGCTaGGGGAAGTGTTTTCATTGC +
Preference number: 5 (lower is better)
Translates to: RPGILLGVCCSCASQARSLGHSC*GKCFHC
Trigger: GCAATGAAAACACTTCCCCAAGCAGCTGTGGCCAAG...GGAGCGTGCTTGACTTGCACAAGAACAGCAAACACCAAGCAGAATGCCTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS TCA 90 bp GCTGTTATAACATGGTTCTCTGGGGTCCTAGTTCTGCAGTTGAGATaGAGTCCTGGGAGCATTCTTGGTGGCAGGTTAGCCCCAGGAGTC +
Preference number: 5 (lower is better)
Translates to: AVITWFSGVLVLQLR*SPGSILGGRLAPGV
Trigger: GACTCCTGGGGCTAACCTGCCACCAAGAATGCTCCCAGGACTTCATCTCAACTGCAGAACTAGGACCCCAGAGAACCATGTTATAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381630.2
CDS GCA 90 bp GGTTCAGGGTCCCCAGCTCCTTCACCCATTTTATCATACCATCAGTaGAGGAGCCGACCACCATACACCTCAGTAGAAGTGTCTCACCTT +
Preference number: 5 (lower is better)
Translates to: GSGSPAPSPILSYHQ*RSRPPYTSVEVSHL
Trigger: AAGGTGAGACACTTCTACTGAGGTGTATGGTGGTCGGCTCCTGCACTGATGGTATGATAAAATGGGTGAAGGAGCTGGGGACCCTGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608747.1
CDS CCA 90 bp TGTGGGGGACTCATTGACTCCACTGAGGTGGGTACGCTCACCTGTTaGAGACATCTCAGTTGCAGGTTCACTGGTGAATTCTGCCTCTTT +
Preference number: 5 (lower is better)
Translates to: CGGLIDSTEVGTLTC*RHLSCRFTGEFCLF
Trigger: AAAGAGGCAGAATTCACCAGTGAACCTGCAACTGAGATGTCTCCAACAGGTGAGCGTACCCACCTCAGTGGAGTCAATGAGTCCCCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381630.2
CDS-3UTR CAA 90 bp AGAGGCTGTCTGTATGCTGCTGTGGTGGAGATAACTGGTTATCCCCTGATATCTTGTGGTCCCCAAGACTaGGGGCTCCTCTGCTCTCTT +
Preference number: 5 (lower is better)
Translates to: RGCLYAAVVEITGYPLISCGPQD*GLLCSL
Trigger: AAGAGAGCAGAGGAGCCCCAAGTCTTGGGGACCACA...AGATATCAGGGGATAACCAGTTATCTCCACCACAGCAGCATACAGACAGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CAA 90 bp CAGGAGGCCTCTTCTGTCCACCCTAGGGTTACTTGCTCATTGTCTGTCTTCTCTAGAATGCTGAAGTCATaGTTGGAGGCCTGCACCGCT +
Preference number: 5 (lower is better)
Translates to: QEASSVHPRVTCSLSVFSRMLKS*LEACTA
Trigger: AGCGGTGCAGGCCTCCAACAATGACTTCAGCATTCT...AGAGAAGACAGACAATGAGCAAGTAACCCTAGGGTGGACAGAAGAGGCCTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CAA 90 bp CTTGGTGTTTGCTGTTCTTGTGCAAGTCAAGCACGCTCCTGCCTCAGGACCTTTAGAATGCTGAAGTCATaGTTGGAGGCCTGCACCGCT +
Preference number: 5 (lower is better)
Translates to: LGVCCSCASQARSCLRTFRMLKS*LEACTA
Trigger: AGCGGTGCAGGCCTCCAACAATGACTTCAGCATTCT...AAAGGTCCTGAGGCAGGAGCGTGCTTGACTTGCACAAGAACAGCAAACACCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CAA 90 bp CTGGAGGTAGGGAAATGGTTGAGGAGCCCTGGCTCCTCTCCAACTCAGAGGGTCGTGAATTCTGCCTCTTaGGAAGAGGTAGATTTTGCT +
Preference number: 5 (lower is better)
Translates to: LEVGKWLRSPGSSPTQRVVNSAS*EEVDFA
Trigger: AGCAAAATCTACCTCTTCCAAAGAGGCAGAATTCAC...GACCCTCTGAGTTGGAGAGGAGCCAGGGCTCCTCAACCATTTCCCTACCTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CAA 90 bp ACTGGAGGTAGGGAAATGGTTGAGGAGCCCTGGCTCCTCTCCAACTCAGAGGGTAGATGGTCTGGCTGGTaGAGTTCAGAGATTCTTACA +
Preference number: 5 (lower is better)
Translates to: TGGREMVEEPWLLSNSEGRWSGW*SSEILT
Trigger: TGTAAGAATCTCTGAACTCAACCAGCCAGACCATCT...ACCCTCTGAGTTGGAGAGGAGCCAGGGCTCCTCAACCATTTCCCTACCTCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CAA 90 bp GCATTCGCTGTTCCTTGTACTTTTCAGCTCTTCCCCTGGGTATCTGCAGGGCTCTCTGCTACTTCACCTTaGCTGTGTGTCTCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: AFAVPCTFQLFPWVSAGLSATSP*LCVSWL
Trigger: CAGCCAAGAGACACACAGCAAAGGTGAAGTAGCAGA...GAGCCCTGCAGATACCCAGGGGAAGAGCTGAAAAGTACAAGGAACAGCGAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481731.5
CDS GCA 90 bp GCTTTCCTGCTGTTTCAGCTTCCCGTGGCCGCTGTAACAGATCACTaGAAACCTGTTGGAGACATCTCAGTTGCAGGTTCACTGGTGAAT +
Preference number: 5 (lower is better)
Translates to: AFLLFQLPVAAVTDH*KPVGDISVAGSLVN
Trigger: ATTCACCAGTGAACCTGCAACTGAGATGTCTCCAACAGGTTTGCAGTGATCTGTTACAGCGGCCACGGGAAGCTGAAACAGCAGGAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CAA 90 bp AGAGGCTGTCTGTATGCTGCTGTGGTGGAGATAACTGGTTATCCCCTGATATCTATGCTGAAGTCATTGTaGGAGGCCTGCACCGCTGTC +
Preference number: 5 (lower is better)
Translates to: RGCLYAAVVEITGYPLISMLKSL*EACTAV
Trigger: GACAGCGGTGCAGGCCTCCAACAATGACTTCAGCAT...AGATATCAGGGGATAACCAGTTATCTCCACCACAGCAGCATACAGACAGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CAA 90 bp GCCAGGCATTCTGCTTGGTGTTTGCTGTTCTTGTGCAAGTCAAGCACGCTCCTGCTCACTGGAGACGTTTaGCAGAAGAATGCTGAAGTC +
Preference number: 5 (lower is better)
Translates to: ARHSAWCLLFLCKSSTLLLTGDV*QKNAEV
Trigger: GACTTCAGCATTCTTCTGCAAAACGTCTCCAGTGAG...CAGGAGCGTGCTTGACTTGCACAAGAACAGCAAACACCAAGCAGAATGCCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CAA 90 bp GCTGTTCCTTGTACTTTTCAGCTCTTCCCCTGGGTATCTGCAGGGCTCTCTTCCATCACTGCAAACCTGTaGGAGACATCTCAGTTGCAG +
Preference number: 5 (lower is better)
Translates to: AVPCTFQLFPWVSAGLSSITANL*ETSQLQ
Trigger: CTGCAACTGAGATGTCTCCAACAGGTTTGCAGTGAT...GGAAGAGAGCCCTGCAGATACCCAGGGGAAGAGCTGAAAAGTACAAGGAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS GCA 90 bp GACTCCACTGAGGTGGGTACGCTCACCTGTTGGAGACATCTCAGTTaGAGGTTCACTGGTGAATTCTGCCTCTTTGGAAGAGGTAGATTT +
Preference number: 5 (lower is better)
Translates to: DSTEVGTLTCWRHLS*RFTGEFCLFGRGRF
Trigger: AAATCTACCTCTTCCAAAGAGGCAGAATTCACCAGTGAACCTGCAACTGAGATGTCTCCAACAGGTGAGCGTACCCACCTCAGTGGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381630.2
CDS GCA 90 bp GTAGGTTCCAGTGTGCTCCCTTCACCCATTTTATCATACCATCAGTaGAGGAGCCGACCACCATACACCTCAGTAGAAGTGTCTCACCTT +
Preference number: 5 (lower is better)
Translates to: VGSSVLPSPILSYHQ*RSRPPYTSVEVSHL
Trigger: AAGGTGAGACACTTCTACTGAGGTGTATGGTGGTCGGCTCCTGCACTGATGGTATGATAAAATGGGTGAAGGGAGCACACTGGAACCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608073.1
CDS CCA 90 bp GTTTCAGCTTCCCGTGGCCGCTGTAACAGATCACTGCAAACCTGTTaGAGACATCTCAGTTGCAGGTTCACTGGTGAATTCTGCCTCTTT +
Preference number: 5 (lower is better)
Translates to: VSASRGRCNRSLQTC*RHLSCRFTGEFCLF
Trigger: AAAGAGGCAGAATTCACCAGTGAACCTGCAACTGAGATGTCTCCAACAGGTTTGCAGTGATCTGTTACAGCGGCCACGGGAAGCTGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CAA 90 bp ACTGTGTGCTTCATCTCTGCCATGTATGTAGTTCAGGCGTTTACGGGGTCTAATATGCTGAAGTCATTGTaGGAGGCCTGCACCGCTGTC +
Preference number: 5 (lower is better)
Translates to: TVCFISAMYVVQAFTGSNMLKSL*EACTAV
Trigger: GACAGCGGTGCAGGCCTCCAACAATGACTTCAGCAT...ATTAGACCCCGTAAACGCCTGAACTACATACATGGCAGAGATGAAGCACACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CAA 90 bp AGTTCAGAGATTCTTACAGACATCTCCTGGGAAGAAGACTCTGAGTTGGATGTTGCTGGGCCTGTGGTCTaGACATCTTCTTGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: SSEILTDISWEEDSELDVAGPVV*TSSCPG
Trigger: CCCTGGGCAAGAAGATGTCAAGACCACAGGCCCAGC...AACATCCAACTCAGAGTCTTCTTCCCAGGAGATGTCTGTAAGAATCTCTGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CAA 90 bp TGGACCAAAACCAGATGTAGGGATCTAGGAGTTTGTCATGAGGCCTGGGGGCACGTGCCTGGTCTTGAATaGGTTCTTACACAATGCAGA +
Preference number: 5 (lower is better)
Translates to: WTKTRCRDLGVCHEAWGHVPGLE*VLTQCR
Trigger: TCTGCATTGTGTAAGAACCAATTCAAGACCAGGCAC...GTGCCCCCAGGCCTCATGACAAACTCCTAGATCCCTACATCTGGTTTTGGTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CAA 90 bp CTGTTCCTTGTACTTTTCAGCTCTTCCCCTGGGTATCTGCAGGGCTCTCTTCCTGGGGAAGTGTTTTCATaGCAGCAACACAAGGCTGTT +
Preference number: 5 (lower is better)
Translates to: LFLVLFSSSPGYLQGSLPGEVFS*QQHKAV
Trigger: AACAGCCTTGTGTTGCTGCAATGAAAACACTTCCCC...AGGAAGAGAGCCCTGCAGATACCCAGGGGAAGAGCTGAAAAGTACAAGGAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CAA 90 bp CAGGAGGCCTCTTCTGTCCACCCTAGGGTTACTTGCTCATTGTCTGTCTTCTCTGGGGAAGTGTTTTCATaGCAGCAACACAAGGCTGTT +
Preference number: 5 (lower is better)
Translates to: QEASSVHPRVTCSLSVFSGEVFS*QQHKAV
Trigger: AACAGCCTTGTGTTGCTGCAATGAAAACACTTCCCC...AGAGAAGACAGACAATGAGCAAGTAACCCTAGGGTGGACAGAAGAGGCCTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CAA 90 bp TTCATCTCTGCCATGTATGTAGTTCAGGCGTTTACGGGGTCTAATACAGGCCAGCTTGGCCACAGCTGCTaGGGGAAGTGTTTTCATTGC +
Preference number: 5 (lower is better)
Translates to: FISAMYVVQAFTGSNTGQLGHSC*GKCFHC
Trigger: GCAATGAAAACACTTCCCCAAGCAGCTGTGGCCAAG...CTGGCCTGTATTAGACCCCGTAAACGCCTGAACTACATACATGGCAGAGATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CAA 90 bp TTCGCTGTTCCTTGTACTTTTCAGCTCTTCCCCTGGGTATCTGCAGGGCTCTCTATCACTGCAAACCTGTaGGAGACATCTCAGTTGCAG +
Preference number: 5 (lower is better)
Translates to: FAVPCTFQLFPWVSAGLSITANL*ETSQLQ
Trigger: CTGCAACTGAGATGTCTCCAACAGGTTTGCAGTGAT...AGAGAGCCCTGCAGATACCCAGGGGAAGAGCTGAAAAGTACAAGGAACAGCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS GCA 90 bp GTGTGGTCTGCAGGGCCTGATCCTTACCCTTCACAAGCACTGAGGTaGCTTCATCCGATTTCATTTCTGAGTGTTCACTCAAACCATCAA +
Preference number: 5 (lower is better)
Translates to: VWSAGPDPYPSQALR*LHPISFLSVHSNHQ
Trigger: TTGATGGTTTGAGTGAACACTCAGAAATGAAATCGGATGAAGGCACCTCAGTGCTTGTGAAGGGTAAGGATCAGGCCCTGCAGACCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609796.1
CDS-3UTR CAA 90 bp TGGACCAAAACCAGATGTAGGGATCTAGGAGTTTGTCATGAGGCCTGGGGGCACGTTATAAATTTCCTGTaGGTCCTGAGTGCTCACCTT +
Preference number: 5 (lower is better)
Translates to: WTKTRCRDLGVCHEAWGHVINFL*VLSAHL
Trigger: AAGGTGAGCACTCAGGACCAACAGGAAATTTATAAC...GTGCCCCCAGGCCTCATGACAAACTCCTAGATCCCTACATCTGGTTTTGGTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS TCA 90 bp GGTGACATTGTGGATATAGATGGAATAATCACAATTCAGTGGTTCTaGTGTCCGTTGGATCATGGGCATTACCCCAGGGAAGGAGCCACG +
Preference number: 5 (lower is better)
Translates to: GDIVDIDGIITIQWF*CPLDHGHYPREGAT
Trigger: CGTGGCTCCTTCCCTGGGGTAATGCCCATGATCCAACGGACATCAGAACCACTGAATTGTGATTATTCCATCTATATCCACAATGTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359801.8
ENST00000481731.5
ENST00000486775.5
ENST00000609796.1
CDS GCA 90 bp GAGGCCTGTTGGAGACATCTCAGTTGCAGGTTCACTGGTGAATTCTaGCTCTTTGGAAGAGGTAGATTTTGCTTTCACTTTCAGGCTGGT +
Preference number: 5 (lower is better)
Translates to: EACWRHLSCRFTGEF*LFGRGRFCFHFQAG
Trigger: ACCAGCCTGAAAGTGAAAGCAAAATCTACCTCTTCCAAAGAGGCAGAATTCACCAGTGAACCTGCAACTGAGATGTCTCCAACAGGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359801.8
ENST00000444444.2
CDS GCA 90 bp GGCCGCTGTAACAGATCACTGCAAACCTGTTGGAGACATCTCAGTTaGAGGTTCACTGGTGAATTCTGCCTCTTTGGAAGAGGTAGATTT +
Preference number: 5 (lower is better)
Translates to: GRCNRSLQTCWRHLS*RFTGEFCLFGRGRF
Trigger: AAATCTACCTCTTCCAAAGAGGCAGAATTCACCAGTGAACCTGCAACTGAGATGTCTCCAACAGGTTTGCAGTGATCTGTTACAGCGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CAA 90 bp ATGTCACTTTATCAGGAGGCCTCTTCTGTCCACCCTAGGGTTACTTGCTCATTGCTCACTGGAGACGTTTaGCAGAAGAATGCTGAAGTC +
Preference number: 5 (lower is better)
Translates to: MSLYQEASSVHPRVTCSLLTGDV*QKNAEV
Trigger: GACTTCAGCATTCTTCTGCAAAACGTCTCCAGTGAG...CAATGAGCAAGTAACCCTAGGGTGGACAGAAGAGGCCTCCTGATAAAGTGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CAA 90 bp AGGTGTCTGCTCAAATGTCACTTTATCAGGAGGCCTCTTCTGTCCACCCTAGGGGTGAATTCTGCCTCTTaGGAAGAGGTAGATTTTGCT +
Preference number: 5 (lower is better)
Translates to: RCLLKCHFIRRPLLSTLGVNSAS*EEVDFA
Trigger: AGCAAAATCTACCTCTTCCAAAGAGGCAGAATTCAC...CCCTAGGGTGGACAGAAGAGGCCTCCTGATAAAGTGACATTTGAGCAGACACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CAA 90 bp AGTTCAGAGATTCTTACAGACATCTCCTGGGAAGAAGACTCTGAGTTGGATGTTCAGGGAGTCTCTGTATaGCTTGGCCTGCTGATGGTC +
Preference number: 5 (lower is better)
Translates to: SSEILTDISWEEDSELDVQGVSV*LGLLMV
Trigger: GACCATCAGCAGGCCAAGCAATACAGAGACTCCCTG...AACATCCAACTCAGAGTCTTCTTCCCAGGAGATGTCTGTAAGAATCTCTGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS-3UTR CAA 90 bp TTCGCTGTTCCTTGTACTTTTCAGCTCTTCCCCTGGGTATCTGCAGGGCTCTCTTTTGCTGTGTGTCTCTaGGCTGAAATCTTTCTTCCA +
Preference number: 5 (lower is better)
Translates to: FAVPCTFQLFPWVSAGLSFAVCL*AEIFLP
Trigger: TGGAAGAAAGATTTCAGCCAAGAGACACACAGCAAA...AGAGAGCCCTGCAGATACCCAGGGGAAGAGCTGAAAAGTACAAGGAACAGCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481731.5
CDS-3UTR CAA 90 bp TGTTTGCTGTTCTTGTGCAAGTCAAGCACGCTCCTGCCTCAGGACCTTTGCATTTGCTACTGCTGTTTTTaGCCTGATGCTGTTTTCCAG +
Preference number: 5 (lower is better)
Translates to: CLLFLCKSSTLLPQDLCICYCCF*PDAVFQ
Trigger: CTGGAAAACAGCATCAGGCAAAAAACAGCAGTAGCA...AATGCAAAGGTCCTGAGGCAGGAGCGTGCTTGACTTGCACAAGAACAGCAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481731.5
CDS GCA 90 bp CTCACCTGTTGGAGACATCTCAGTTGCAGGTTCACTGGTGAATTCTaGCTCTTTGGAAGAGGTAGATTTTGCTTTCACTTTCAGGCTGGT +
Preference number: 5 (lower is better)
Translates to: LTCWRHLSCRFTGEF*LFGRGRFCFHFQAG
Trigger: ACCAGCCTGAAAGTGAAAGCAAAATCTACCTCTTCCAAAGAGGCAGAATTCACCAGTGAACCTGCAACTGAGATGTCTCCAACAGGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381630.2
CDS-3UTR CAA 90 bp TGTGGTGGAGATAACTGGTTATCCCCTGATATCTGCCATCTGGTTTCTCTAGTGCCACCGTGCCTGGTCTaGAATTGGTTCTTACACAAT +
Preference number: 5 (lower is better)
Translates to: CGGDNWLSPDICHLVSLVPPCLV*NWFLHN
Trigger: ATTGTGTAAGAACCAATTCAAGACCAGGCACGGTGG...CACTAGAGAAACCAGATGGCAGATATCAGGGGATAACCAGTTATCTCCACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS GCA 90 bp CAAACCTGTTGGAGACATCTCAGTTGCAGGTTCACTGGTGAATTCTaGCTCTTTGGAAGAGGTAGATTTTGCTTTCACTTTCAGGCTGGT +
Preference number: 5 (lower is better)
Translates to: QTCWRHLSCRFTGEF*LFGRGRFCFHFQAG
Trigger: ACCAGCCTGAAAGTGAAAGCAAAATCTACCTCTTCCAAAGAGGCAGAATTCACCAGTGAACCTGCAACTGAGATGTCTCCAACAGGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS-3UTR CAA 90 bp AGTTCAGAGATTCTTACAGACATCTCCTGGGAAGAAGACTCTGAGTTGGATGTTATCTCCCAGTGTTTCTaGCAGCTAGGTGTGACCATG +
Preference number: 5 (lower is better)
Translates to: SSEILTDISWEEDSELDVISQCF*QLGVTM
Trigger: CATGGTCACACCTAGCTGCAAGAAACACTGGGAGAT...AACATCCAACTCAGAGTCTTCTTCCCAGGAGATGTCTGTAAGAATCTCTGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359801.8
CDS TCA 90 bp AACCATCAAACCTCACACAGTGGTAGGTTCCAGTGTGCTCCCTGGTaGCATTGTGGATATAGATGGAATAATCACAATTCAGTGGTTCTG +
Preference number: 5 (lower is better)
Translates to: NHQTSHSGRFQCAPW*HCGYRWNNHNSVVL
Trigger: CAGAACCACTGAATTGTGATTATTCCATCTATATCCACAATGTCACCAGGGAGCACACTGGAACCTACCACTGTGTGAGGTTTGATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359801.8
ENST00000481731.5
ENST00000486775.5
ENST00000609796.1
CDS GCA 90 bp TTGCCTGTTGGGTTTCCTCTGAAACTTTACACAGTAATAGGTGCCTaGATCCTCACTGGAGACGTTTTGCAGAAGAATGCTGAAGTCATT +
Preference number: 5 (lower is better)
Translates to: LPVGFPLKLYTVIGA*ILTGDVLQKNAEVI
Trigger: AATGACTTCAGCATTCTTCTGCAAAACGTCTCCAGTGAGGATGCAGGCACCTATTACTGTGTAAAGTTTCAGAGGAAACCCAACAGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359801.8
ENST00000381630.2
ENST00000444444.2
ENST00000481731.5
ENST00000486775.5
CDS TCA 72 bp TGGCCTCCCGGCTCAGACCAGCTCCCTGGAACCACCTaGTGGGTCCAGGGGGACCGTCTCCAAGCACTGTGC +
Preference number: 6 (lower is better)
Translates to: WPPGSDQLPGTT*WVQGDRLQALC
Trigger: GCACAGTGCTTGGAGACGGTCCCCCTGGACCCATCAGGTGGTTCCAGGGAGCTGGTCTGAGCCGGGAGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359801.8
ENST00000381630.2
ENST00000444444.2
ENST00000481731.5
ENST00000486775.5
ENST00000608747.1
CDS GCA 72 bp TGGGGCCCTCGGGCTGTAGCACCTGCCAGTCATTCCTaGTGCTCTGCCCAGAGGCATCGTGTGCTGGGCCCT +
Preference number: 6 (lower is better)
Translates to: WGPRAVAPASHS*CSAQRHRVLGP
Trigger: AGGGCCCAGCACACGATGCCTCTGGGCAGAGCAGCAGGAATGACTGGCAGGTGCTACAGCCCGAGGGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608747.1
CDS CCA 72 bp CTGGTTCAGGGTCCCCAGCTCCTTCTGCCACCAGCATaGGGCCCTCGGGCTGTAGCACCTGCCAGTCATTCC +
Preference number: 6 (lower is better)
Translates to: LVQGPQLLLPPA*GPRAVAPASHS
Trigger: GGAATGACTGGCAGGTGCTACAGCCCGAGGGCCCCATGCTGGTGGCAGAAGGAGCTGGGGACCCTGAACCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381630.2
ENST00000444444.2
CDS GCA 72 bp TGGGGCCCTCGGGCTGTAGCACCTGCCAGTCATTCCTaGTGCTCTGCCCAGAGGCATCTGAGGGGACAAGGA +
Preference number: 6 (lower is better)
Translates to: WGPRAVAPASHS*CSAQRHLRGQG
Trigger: TCCTTGTCCCCTCAGATGCCTCTGGGCAGAGCAGCAGGAATGACTGGCAGGTGCTACAGCCCGAGGGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359801.8
ENST00000381630.2
ENST00000444444.2
ENST00000481731.5
ENST00000486775.5
ENST00000608073.1
ENST00000609796.1
CDS CAA 72 bp CATGGCTCCTGCTGGGCCTGTGGTCTTGACATCTTCTaGCCCAGGGCTCCTCCGAGAGGTAGCCAGGGCCAG +
Preference number: 6 (lower is better)
Translates to: HGSCWACGLDIF*PRAPPRGSQGQ
Trigger: CTGGCCCTGGCTACCTCTCGGAGGAGCCCTGGGCAAGAAGATGTCAAGACCACAGGCCCAGCAGGAGCCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359801.8
ENST00000444444.2
CDS TCA 72 bp TTGGGGCTCCTCTGCTCTCTTGTGAGTGTTGGAGTCTaGGGCGGGGCCCGTGGACAAGGCAGTTTCTGCGTC +
Preference number: 6 (lower is better)
Translates to: LGLLCSLVSVGV*GGARGQGSFCV
Trigger: GACGCAGAAACTGCCTTGTCCACGGGCCCCGCCTCAGACTCCAACACTCACAAGAGAGCAGAGGAGCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000444444.2
ENST00000481731.5
ENST00000486775.5
CDS GCA 72 bp TGGAGGCCTGCACCGCTGTCTCCTTGGGGTGGGAGATaGCTCCAAAGTTGTAAATGGCCTCCCGGCTCAGAC +
Preference number: 6 (lower is better)
Translates to: WRPAPLSPWGGR*LQSCKWPPGSD
Trigger: GTCTGAGCCGGGAGGCCATTTACAACTTTGGAGGCATCTCCCACCCCAAGGAGACAGCGGTGCAGGCCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359801.8
ENST00000381630.2
ENST00000444444.2
ENST00000481731.5
ENST00000486775.5
ENST00000608747.1
CDS CAA 90 bp TTGCTCCATGCTAAGGTGTTCATGGCTCCTGCTGGGCCTGTGGTCTaGACATCTTCTTGCCCAGGGCTCCTCCGAGAGGTAGCCAGGGCC +
Preference number: 6 (lower is better)
Translates to: LLHAKVFMAPAGPVV*TSSCPGLLREVARA
Trigger: GGCCCTGGCTACCTCTCGGAGGAGCCCTGGGCAAGAAGATGTCAAGACCACAGGCCCAGCAGGAGCCATGAACACCTTAGCATGGAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359801.8
ENST00000444444.2
CDS CAA 90 bp GTCTGGGACTGCTCCCTTCCCATGACCAAGCCATTCATGGCCCCCTaGCCTGTGGGGGACTCATTGACTCCACTGAGGTGGGTACGCTCA +
Preference number: 6 (lower is better)
Translates to: VWDCSLPMTKPFMAP*PVGDSLTPLRWVRS
Trigger: TGAGCGTACCCACCTCAGTGGAGTCAATGAGTCCCCCACAGGCAAGGGGGCCATGAATGGCTTGGTCATGGGAAGGGAGCAGTCCCAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381630.2
CDS GCA 72 bp ATTCTTGGTGGCAGGTTAGCCCCAGGAGTCTGGGACTaGTCCCTTCCCATGACCAAGCCATTCATGGCCCCC +
Preference number: 6 (lower is better)
Translates to: ILGGRLAPGVWD*SLPMTKPFMAP
Trigger: GGGGGCCATGAATGGCTTGGTCATGGGAAGGGAGCAGTCCCAGACTCCTGGGGCTAACCTGCCACCAAGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381630.2
CDS CCA 72 bp ACCTCAGTAGAAGTGTCTCACCTTCTGCCACCAGCATaGGGCCCTCGGGCTGTAGCACCTGCCAGTCATTCC +
Preference number: 6 (lower is better)
Translates to: TSVEVSHLLPPA*GPRAVAPASHS
Trigger: GGAATGACTGGCAGGTGCTACAGCCCGAGGGCCCCATGCTGGTGGCAGAAGGTGAGACACTTCTACTGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359801.8
ENST00000481731.5
ENST00000486775.5
ENST00000608073.1
ENST00000608747.1
ENST00000609796.1
CDS CCA 72 bp TCTCCTTGGGGTGGGAGATGCCTCCAAAGTTGTAAATaGCCTCCCGGCTCAGACCAGCTCCCTGGAACCACC +
Preference number: 6 (lower is better)
Translates to: SPWGGRCLQSCK*PPGSDQLPGTT
Trigger: GGTGGTTCCAGGGAGCTGGTCTGAGCCGGGAGGCCATTTACAACTTTGGAGGCATCTCCCACCCCAAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359801.8
ENST00000381630.2
ENST00000444444.2
ENST00000481731.5
ENST00000486775.5
ENST00000608747.1
CDS CCA 72 bp CTCTCTTGTGAGTGTTGGAGTCTGAGGCGGGGCCCGTaGACAAGGCAGTTTCTGCGTCTCTTGGCCACAGCT +
Preference number: 6 (lower is better)
Translates to: LSCECWSLRRGP*TRQFLRLLATA
Trigger: AGCTGTGGCCAAGAGACGCAGAAACTGCCTTGTCCACGGGCCCCGCCTCAGACTCCAACACTCACAAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000444444.2
ENST00000481731.5
ENST00000486775.5
CDS CAA 90 bp CCCATGACCAAGCCATTCATGGCCCCCTTGCCTGTGGGGGACTCATaGACTCCACTGAGGTGGGTACGCTCACCTGTTGGAGACATCTCA +
Preference number: 6 (lower is better)
Translates to: PMTKPFMAPLPVGDS*TPLRWVRSPVGDIS
Trigger: TGAGATGTCTCCAACAGGTGAGCGTACCCACCTCAGTGGAGTCAATGAGTCCCCCACAGGCAAGGGGGCCATGAATGGCTTGGTCATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381630.2
CDS CAA 72 bp GCTAAGGTGTTCATGGCTCCTGCTGGGCCTGTGGTCTaGACATCTTCTTGCCCAGGGCTCCTCCGAGAGGTA +
Preference number: 6 (lower is better)
Translates to: AKVFMAPAGPVV*TSSCPGLLREV
Trigger: TACCTCTCGGAGGAGCCCTGGGCAAGAAGATGTCAAGACCACAGGCCCAGCAGGAGCCATGAACACCTTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359801.8
ENST00000444444.2
CDS CAA 72 bp AAGCCATTCATGGCCCCCTTGCCTGTGGGGGACTCATaGACTCCACTGAGGTGGGTACGCTCACCTGTTGGA +
Preference number: 6 (lower is better)
Translates to: KPFMAPLPVGDS*TPLRWVRSPVG
Trigger: TCCAACAGGTGAGCGTACCCACCTCAGTGGAGTCAATGAGTCCCCCACAGGCAAGGGGGCCATGAATGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381630.2
CDS CAA 90 bp GCATCCTCACTGGAGACGTTTTGCAGAAGAATGCTGAAGTCATTGTaGGAGGCCTGCACCGCTGTCTCCTTGGGGTGGGAGATGCCTCCA +
Preference number: 6 (lower is better)
Translates to: ASSLETFCRRMLKSL*EACTAVSLGWEMPP
Trigger: TGGAGGCATCTCCCACCCCAAGGAGACAGCGGTGCAGGCCTCCAACAATGACTTCAGCATTCTTCTGCAAAACGTCTCCAGTGAGGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359801.8
ENST00000381630.2
ENST00000444444.2
ENST00000481731.5
ENST00000486775.5
CDS GCA 72 bp CTGCTGCTCTGCCCAGAGGCATCGTGTGCTGGGCCCTaGGTGCATGATGTCACTTATTCTTCACAATGCTTC +
Preference number: 6 (lower is better)
Translates to: LLLCPEASCAGP*VHDVTYSSQCF
Trigger: GAAGCATTGTGAAGAATAAGTGACATCATGCACGCAGGGCCCAGCACACGATGCCTCTGGGCAGAGCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608747.1
CDS CCA 72 bp CTCTGGGGTCCTAGTTCTGCAGTTGAGATGAAGTCCTaGGAGCATTCTTGGTGGCAGGTTAGCCCCAGGAGT +
Preference number: 6 (lower is better)
Translates to: LWGPSSAVEMKS*EHSWWQVSPRS
Trigger: ACTCCTGGGGCTAACCTGCCACCAAGAATGCTCCCAGGACTTCATCTCAACTGCAGAACTAGGACCCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381630.2
CDS CAA 90 bp AGTTTCTGCGTCTCTTGGCCACAGCTGCTTGGGGAAGTGTTTTCATaGCAGCAACACAAGGCTGTTGGTGCAATAGGAAGGAGCCCGGTC +
Preference number: 6 (lower is better)
Translates to: SFCVSWPQLLGEVFS*QQHKAVGAIGRSPV
Trigger: GACCGGGCTCCTTCCTATTGCACCAACAGCCTTGTGTTGCTGCAATGAAAACACTTCCCCAAGCAGCTGTGGCCAAGAGACGCAGAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486775.5
CDS TCA 72 bp CTGCATCCTCACTGGAGACGTTTTGCAGAAGAATGCTaGAGTCATTGTTGGAGGCCTGCACCGCTGTCTCCT +
Preference number: 6 (lower is better)
Translates to: LHPHWRRFAEEC*SHCWRPAPLSP
Trigger: AGGAGACAGCGGTGCAGGCCTCCAACAATGACTTCAGCATTCTTCTGCAAAACGTCTCCAGTGAGGATGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359801.8
ENST00000381630.2
ENST00000444444.2
ENST00000481731.5
ENST00000486775.5
CDS TCA 72 bp ACATGGTTCTCTGGGGTCCTAGTTCTGCAGTTGAGATaGAGTCCTGGGAGCATTCTTGGTGGCAGGTTAGCC +
Preference number: 6 (lower is better)
Translates to: TWFSGVLVLQLR*SPGSILGGRLA
Trigger: GGCTAACCTGCCACCAAGAATGCTCCCAGGACTTCATCTCAACTGCAGAACTAGGACCCCAGAGAACCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381630.2
CDS TCA 72 bp GAAACAGACTGGAGCAAATGTGTGGTCTGCAGGGCCTaGTCCTTACCCTTCACAAGCACTGAGGTGCCTTCA +
Preference number: 6 (lower is better)
Translates to: ETDWSKCVVCRA*SLPFTSTEVPS
Trigger: TGAAGGCACCTCAGTGCTTGTGAAGGGTAAGGATCAGGCCCTGCAGACCACACATTTGCTCCAGTCTGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609796.1
CDS GCA 72 bp GTGGACAAGGCAGTTTCTGCGTCTCTTGGCCACAGCTaGTTGGGGAAGTGTTTTCATTGCAGCAACACAAGG +
Preference number: 6 (lower is better)
Translates to: VDKAVSASLGHS*LGKCFHCSNTR
Trigger: CCTTGTGTTGCTGCAATGAAAACACTTCCCCAAGCAGCTGTGGCCAAGAGACGCAGAAACTGCCTTGTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS GCA 72 bp TGCTCTGCCCAGAGGCATCGTGTGCTGGGCCCTGCGTaGATGATGTCACTTATTCTTCACAATGCTTCTGTA +
Preference number: 6 (lower is better)
Translates to: CSAQRHRVLGPA*MMSLILHNASV
Trigger: TACAGAAGCATTGTGAAGAATAAGTGACATCATGCACGCAGGGCCCAGCACACGATGCCTCTGGGCAGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608747.1
CDS CAA 72 bp GACAAGGCAGTTTCTGCGTCTCTTGGCCACAGCTGCTaGGGGAAGTGTTTTCATTGCAGCAACACAAGGCTG +
Preference number: 6 (lower is better)
Translates to: DKAVSASLGHSC*GKCFHCSNTRL
Trigger: CAGCCTTGTGTTGCTGCAATGAAAACACTTCCCCAAGCAGCTGTGGCCAAGAGACGCAGAAACTGCCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS GCA 72 bp GAGGTGGGTACGCTCACCTGTTGGAGACATCTCAGTTaGAGGTTCACTGGTGAATTCTGCCTCTTTGGAAGA +
Preference number: 6 (lower is better)
Translates to: EVGTLTCWRHLS*RFTGEFCLFGR
Trigger: TCTTCCAAAGAGGCAGAATTCACCAGTGAACCTGCAACTGAGATGTCTCCAACAGGTGAGCGTACCCACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381630.2
CDS GCA 72 bp GGCTTAGCTACAAAGCCATGTTCTCCAGTGTCGCTGTaGATAGCCTCACAGTGTGTCCCTACACTCAGAATC +
Preference number: 6 (lower is better)
Translates to: GLATKPCSPVSL*IASQCVPTLRI
Trigger: GATTCTGAGTGTAGGGACACACTGTGAGGCTATGCACAGCGACACTGGAGAACATGGCTTTGTAGCTAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381630.2
CDS GCA 72 bp CTGTTTCAGCTTCCCGTGGCCGCTGTAACAGATCACTaGAAACCTGTTGGAGACATCTCAGTTGCAGGTTCA +
Preference number: 6 (lower is better)
Translates to: LFQLPVAAVTDH*KPVGDISVAGS
Trigger: TGAACCTGCAACTGAGATGTCTCCAACAGGTTTGCAGTGATCTGTTACAGCGGCCACGGGAAGCTGAAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS GCA 72 bp TGGTGCAATAGGAAGGAGCCCGGTCAAAGGGTTTCCTaGTTTTGTGTCTGGGCTGTGATTCCTGTAGTCACT +
Preference number: 6 (lower is better)
Translates to: WCNRKEPGQRVS*FCVWAVIPVVT
Trigger: AGTGACTACAGGAATCACAGCCCAGACACAAAAGCAGGAAACCCTTTGACCGGGCTCCTTCCTATTGCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486775.5
CDS GCA 72 bp TCCCCAGCTCCTTCACCCATTTTATCATACCATCAGTaGAGGAGCCGACCACCATACACCTCAGTAGAAGTG +
Preference number: 6 (lower is better)
Translates to: SPAPSPILSYHQ*RSRPPYTSVEV
Trigger: CACTTCTACTGAGGTGTATGGTGGTCGGCTCCTGCACTGATGGTATGATAAAATGGGTGAAGGAGCTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608747.1
CDS CCA 72 bp TGGGGAAGTGTTTTCATTGCAGCAACACAAGGCTGTTaGTGCAATAGGAAGGAGCCCGGTCAAAGGGTTTCC +
Preference number: 6 (lower is better)
Translates to: WGSVFIAATQGC*CNRKEPGQRVS
Trigger: GGAAACCCTTTGACCGGGCTCCTTCCTATTGCACCAACAGCCTTGTGTTGCTGCAATGAAAACACTTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486775.5
CDS CAA 72 bp GTCTCTTGGCCACAGCTGCTTGGGGAAGTGTTTTCATaGCAGCAACACAAGGCTGTTGGTGCAATAGGAAGG +
Preference number: 6 (lower is better)
Translates to: VSWPQLLGEVFS*QQHKAVGAIGR
Trigger: CCTTCCTATTGCACCAACAGCCTTGTGTTGCTGCAATGAAAACACTTCCCCAAGCAGCTGTGGCCAAGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486775.5
CDS CAA 90 bp TACCTTTGGTGCATGGTGGAAGACTATTCTTCCTTGTCCCTTGACTaGGAGCTGAGCCATGTGACTTGCTTTAGCCAGTGGGCTGTTAGC +
Preference number: 6 (lower is better)
Translates to: YLWCMVEDYSSLSLD*ELSHVTCFSQWAVS
Trigger: GCTAACAGCCCACTGGCTAAAGCAAGTCACATGGCTCAGCTCCAAGTCAAGGGACAAGGAAGAATAGTCTTCCACCATGCACCAAAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609796.1
CDS GCA 72 bp AGTGTGCTCCCTTCACCCATTTTATCATACCATCAGTaGAGGAGCCGACCACCATACACCTCAGTAGAAGTG +
Preference number: 6 (lower is better)
Translates to: SVLPSPILSYHQ*RSRPPYTSVEV
Trigger: CACTTCTACTGAGGTGTATGGTGGTCGGCTCCTGCACTGATGGTATGATAAAATGGGTGAAGGGAGCACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608073.1
CDS GCA 72 bp GCAGGGCCTGATCCTTACCCTTCACAAGCACTGAGGTaGCTTCATCCGATTTCATTTCTGAGTGTTCACTCA +
Preference number: 6 (lower is better)
Translates to: AGPDPYPSQALR*LHPISFLSVHS
Trigger: TGAGTGAACACTCAGAAATGAAATCGGATGAAGGCACCTCAGTGCTTGTGAAGGGTAAGGATCAGGCCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609796.1
CDS CAA 72 bp ACAGTAATAGGTGCCTGCATCCTCACTGGAGACGTTTaGCAGAAGAATGCTGAAGTCATTGTTGGAGGCCTG +
Preference number: 6 (lower is better)
Translates to: TVIGACILTGDV*QKNAEVIVGGL
Trigger: CAGGCCTCCAACAATGACTTCAGCATTCTTCTGCAAAACGTCTCCAGTGAGGATGCAGGCACCTATTACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359801.8
ENST00000381630.2
ENST00000444444.2
ENST00000481731.5
ENST00000486775.5
CDS CAA 72 bp ACCATAGGTGGACTTACAGATGCCATGATTGAGTACTaGGGGAGTGTGGTAGATGACATGATCAGCCTCAGG +
Preference number: 6 (lower is better)
Translates to: TIGGLTDAMIEY*GSVVDDMISLR
Trigger: CCTGAGGCTGATCATGTCATCTACCACACTCCCCAAGTACTCAATCATGGCATCTGTAAGTCCACCTATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609796.1
CDS TCA 72 bp AGCAGACATAATGTGAGTAGATGCTTGAGGTGTACTTaGAGAGTTGGGACTGGGCTTCTGCTTCTGCCATCT +
Preference number: 6 (lower is better)
Translates to: SRHNVSRCLRCT*RVGTGLLLLPS
Trigger: AGATGGCAGAAGCAGAAGCCCAGTCCCAACTCTTCAAGTACACCTCAAGCATCTACTCACATTATGTCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609796.1
CDS CCA 72 bp ATAGGGTACATCCACACTCTTACCTTTGGTGCATGGTaGAAGACTATTCTTCCTTGTCCCTTGACTTGGAGC +
Preference number: 6 (lower is better)
Translates to: IGYIHTLTFGAW*KTILPCPLTWS
Trigger: GCTCCAAGTCAAGGGACAAGGAAGAATAGTCTTCCACCATGCACCAAAGGTAAGAGTGTGGATGTACCCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609796.1
CDS GCA 72 bp GGGTTTCCTCTGAAACTTTACACAGTAATAGGTGCCTaGATCCTCACTGGAGACGTTTTGCAGAAGAATGCT +
Preference number: 6 (lower is better)
Translates to: GFPLKLYTVIGA*ILTGDVLQKNA
Trigger: AGCATTCTTCTGCAAAACGTCTCCAGTGAGGATGCAGGCACCTATTACTGTGTAAAGTTTCAGAGGAAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359801.8
ENST00000381630.2
ENST00000444444.2
ENST00000481731.5
ENST00000486775.5
CDS GCA 72 bp AACAGATCACTGCAAACCTGTTGGAGACATCTCAGTTaGAGGTTCACTGGTGAATTCTGCCTCTTTGGAAGA +
Preference number: 6 (lower is better)
Translates to: NRSLQTCWRHLS*RFTGEFCLFGR
Trigger: TCTTCCAAAGAGGCAGAATTCACCAGTGAACCTGCAACTGAGATGTCTCCAACAGGTTTGCAGTGATCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481731.5
ENST00000486775.5
CDS GCA 72 bp GCTTGTAATAGGGTACATCCACACTCTTACCTTTGGTaGATGGTGGAAGACTATTCTTCCTTGTCCCTTGAC +
Preference number: 6 (lower is better)
Translates to: ACNRVHPHSYLW*MVEDYSSLSLD
Trigger: GTCAAGGGACAAGGAAGAATAGTCTTCCACCATGCACCAAAGGTAAGAGTGTGGATGTACCCTATTACAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609796.1
CDS TCA 72 bp GTGGATATAGATGGAATAATCACAATTCAGTGGTTCTaGTGTCCGTTGGATCATGGGCATTACCCCAGGGAA +
Preference number: 6 (lower is better)
Translates to: VDIDGIITIQWF*CPLDHGHYPRE
Trigger: TTCCCTGGGGTAATGCCCATGATCCAACGGACATCAGAACCACTGAATTGTGATTATTCCATCTATATCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359801.8
ENST00000481731.5
ENST00000486775.5
ENST00000609796.1
CDS TCA 72 bp ACCTCACACAGTGGTAGGTTCCAGTGTGCTCCCTGGTaGCATTGTGGATATAGATGGAATAATCACAATTCA +
Preference number: 6 (lower is better)
Translates to: TSHSGRFQCAPW*HCGYRWNNHNS
Trigger: TGAATTGTGATTATTCCATCTATATCCACAATGTCACCAGGGAGCACACTGGAACCTACCACTGTGTGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359801.8
ENST00000481731.5
ENST00000486775.5
ENST00000609796.1
CDS TCA 72 bp TTACATGGCCCTGGCTATGAGAAAGTTCGTTATAGCTaGGCTGTTATAACATGGTTCTCTGGGGTCCTAGTT +
Preference number: 6 (lower is better)
Translates to: LHGPGYEKVRYS*AVITWFSGVLV
Trigger: AACTAGGACCCCAGAGAACCATGTTATAACAGCTCAGCTATAACGAACTTTCTCATAGCCAGGGCCATGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381630.2
CDS GCA 72 bp TGGAGACATCTCAGTTGCAGGTTCACTGGTGAATTCTaGCTCTTTGGAAGAGGTAGATTTTGCTTTCACTTT +
Preference number: 6 (lower is better)
Translates to: WRHLSCRFTGEF*LFGRGRFCFHF
Trigger: AAAGTGAAAGCAAAATCTACCTCTTCCAAAGAGGCAGAATTCACCAGTGAACCTGCAACTGAGATGTCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359801.8
ENST00000381630.2
ENST00000444444.2
ENST00000481731.5
ENST00000486775.5
CDS GCA 72 bp GGGCCCTGCGTGCATGATGTCACTTATTCTTCACAATaGTTCTGTAAGGTAAATGGCATCATTCCCATTTTT +
Preference number: 6 (lower is better)
Translates to: GPCVHDVTYSSQ*FCKVNGIIPIF
Trigger: AAAAATGGGAATGATGCCATTTACCTTACAGAAGCATTGTGAAGAATAAGTGACATCATGCACGCAGGGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608747.1