RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SIRPB1 (Homo sapiens)

Ensembl gene IDs: ENSG00000101307

Ensembl transcript IDs: ENST00000262929.9, ENST00000279477.11, ENST00000381603.7, ENST00000381605.9, ENST00000562014.5, ENST00000565076.1, ENST00000565087.5, ENST00000565230.5, ENST00000566055.5, ENST00000568365.1, ENST00000569387.5, ENST00000569629.1

Found 336 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACCATGGTGGAAGGAGAAAAGGAAGCAGGCACCTTCTTCACATGGTaGCAGGAGGGAGAGAGAGAGAGAGAGCGAAGGGGGACTTGCCAC +
Preference number: 1 (lower is better)
Translates to: TMVEGEKEAGTFFTW*QEGERERERRGTCH
Trigger: GTGGCAAGTCCCCCTTCGCTCTCTCTCTCTCTCTCCCTCCTGCCACCATGTGAAGAAGGTGCCTGCTTCCTTTTCTCCTTCCACCATGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR TCA 90 bp GAGAACTCACTATCACAAGAACAGCAAGGGGGAAGTCCGCCCCCATaGTTCAGTCACCTCCTACCAGGCCCATCCCACAACACATGCAGA +
Preference number: 1 (lower is better)
Translates to: ENSLSQEQQGGSPPP*FSHLLPGPSHNTCR
Trigger: TCTGCATGTGTTGTGGGATGGGCCTGGTAGGAGGTGACTGAATCATGGGGGCGGACTTCCCCCTTGCTGTTCTTGTGATAGTGAGTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR GCA 90 bp GAAGCATGGTACTTGCATCTGCTGCTGAGGGCCTCAGAGTGCTTCTaGTCACAGTGGACAGTGAAGTGGAGTTGGCATAACATGGGGAGA +
Preference number: 1 (lower is better)
Translates to: EAWYLHLLLRASECF*SQWTVKWSWHNMGR
Trigger: TCTCCCCATGTTATGCCAACTCCACTTCACTGTCCACTGTGAGCAGAAGCACTCTGAGGCCCTCAGCAGCAGATGCAAGTACCATGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
3UTR CCA 90 bp TACTTGCATCTGCTGCTGAGGGCCTCAGAGTGCTTCTGCTCACAGTaGACAGTGAAGTGGAGTTGGCATAACATGGGGAGAGAGGAAGAG +
Preference number: 1 (lower is better)
Translates to: YLHLLLRASECFCSQ*TVKWSWHNMGREEE
Trigger: CTCTTCCTCTCTCCCCATGTTATGCCAACTCCACTTCACTGTCCACTGTGAGCAGAAGCACTCTGAGGCCCTCAGCAGCAGATGCAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
3UTR CCA 90 bp AACAGGAAGCATGACTGGGAGGCCTCAGGAAACTTACAACCATGGTaGAAGGAGAAAAGGAAGCAGGCACCTTCTTCACATGGTGGCAGG +
Preference number: 1 (lower is better)
Translates to: NRKHDWEASGNLQPW*KEKRKQAPSSHGGR
Trigger: CCTGCCACCATGTGAAGAAGGTGCCTGCTTCCTTTTCTCCTTCCACCATGGTTGTAAGTTTCCTGAGGCCTCCCAGTCATGCTTCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR CCA 90 bp CTTAACAGGAAGCATGACTGGGAGGCCTCAGGAAACTTACAACCATaGTGGAAGGAGAAAAGGAAGCAGGCACCTTCTTCACATGGTGGC +
Preference number: 1 (lower is better)
Translates to: LNRKHDWEASGNLQP*WKEKRKQAPSSHGG
Trigger: GCCACCATGTGAAGAAGGTGCCTGCTTCCTTTTCTCCTTCCACCATGGTTGTAAGTTTCCTGAGGCCTCCCAGTCATGCTTCCTGTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR GCA 90 bp CAGGAACTTCAGATAGGCAGCCAGAGGGAGGTAGTAAACGCAAACTaGCACAAATGGGAGAGGAGTGGTAATAAAAGGGCTGAAGATGTC +
Preference number: 1 (lower is better)
Translates to: QELQIGSQREVVNAN*HKWERSGNKRAEDV
Trigger: GACATCTTCAGCCCTTTTATTACCACTCCTCTCCCATTTGTGGCAGTTTGCGTTTACTACCTCCCTCTGGCTGCCTATCTGAAGTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR CCA 90 bp GAGAGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATaGTACTTGCATCTGCTGCTGAGGGCCTCAGAGTGCTTCTGCTCA +
Preference number: 1 (lower is better)
Translates to: ERFIWLLVLQTVQEA*YLHLLLRASECFCS
Trigger: TGAGCAGAAGCACTCTGAGGCCCTCAGCAGCAGATGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
3UTR CCA 90 bp GAGAGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATaGTACTTGCATCTGCTGCTGAGGGCCTCAGAGTGCTTAGTCAGG +
Preference number: 1 (lower is better)
Translates to: ERFIWLLVLQTVQEA*YLHLLLRASECLVR
Trigger: CCTGACTAAGCACTCTGAGGCCCTCAGCAGCAGATGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565230.5
3UTR TCA 90 bp CTGGGTTTCAGGTTGCACAGTCATTTTTGCAATCTTGCACTGCCATaGAAAGTGAGGGCTGCCTGTATTCGGCATAATACTCATCAAAAT +
Preference number: 1 (lower is better)
Translates to: LGFRLHSHFCNLALP*KVRAACIRHNTHQN
Trigger: ATTTTGATGAGTATTATGCCGAATACAGGCAGCCCTCACTTTTCATGGCAGTGCAAGATTGCAAAAATGACTGTGCAACCTGAAACCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR-3UTR TCA 90 bp GAAGGAGGGAGAGCGGGAGCCATGCAGCTGTGTTGGGGAAGAAGCAGAGAAGTGGGCATCATGGTCTTGTaGAGGTGGAACAGGAGCGTG +
Preference number: 2 (lower is better)
Translates to: EGGRAGAMQLCWGRSREVGIMVL*RWNRSV
Trigger: CACGCTCCTGTTCCACCTTCACAAGACCATGATGCC...CACTTCTCTGCTTCTTCCCCAACACAGCTGCATGGCTCCCGCTCTCCCTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
3UTR-3UTR TCA 90 bp GAGCAGAGACTTGAAGGAGGGAGAGCGGGAGCCATGCAGCTGTGTTGGGGAAGACCCTGCTCAGGACCGTaGATAGAGACACTGCTTTGG +
Preference number: 2 (lower is better)
Translates to: EQRLEGGRAGAMQLCWGRPCSGP*IETLLW
Trigger: CCAAAGCAGTGTCTCTATTCACGGTCCTGAGCAGGG...TCTTCCCCAACACAGCTGCATGGCTCCCGCTCTCCCTCCTTCAAGTCTCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
3UTR-3UTR CCA 90 bp GAAGGAGGGAGAGCGGGAGCCATGCAGCTGTGTTGGGGAAGAAGCAGAGAAGTGGCAGCAGGCTTGGACTaGGCCCTGAAAACCAATTGT +
Preference number: 2 (lower is better)
Translates to: EGGRAGAMQLCWGRSREVAAGLD*ALKTNC
Trigger: ACAATTGGTTTTCAGGGCCCAGTCCAAGCCTGCTGC...CACTTCTCTGCTTCTTCCCCAACACAGCTGCATGGCTCCCGCTCTCCCTCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
3UTR-3UTR TCA 90 bp GAGCAGAGACTTGAAGGAGGGAGAGCGGGAGCCATGCAGCTGTGTTGGGGAAGAACTGTGGCTGAAAAATaGAAGCCAGAGGAGTGGTCC +
Preference number: 2 (lower is better)
Translates to: EQRLEGGRAGAMQLCWGRTVAEK*KPEEWS
Trigger: GGACCACTCCTCTGGCTTTCATTTTTCAGCCACAGT...TCTTCCCCAACACAGCTGCATGGCTCCCGCTCTCCCTCCTTCAAGTCTCTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
3UTR-3UTR TCA 90 bp ACCGTGAATAGAGACACTGCTTTGGGGCATCATGGTCTTGTGAAGGTGGAACAGGGAGGCGTTTGGAGCTaGGTGTGGGGAAGGTTCTCG +
Preference number: 2 (lower is better)
Translates to: TVNRDTALGHHGLVKVEQGGVWS*VWGRFS
Trigger: CGAGAACCTTCCCCACACTCAGCTCCAAACGCCTCC...CTGTTCCACCTTCACAAGACCATGATGCCCCAAAGCAGTGTCTCTATTCACGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
ENST00000569629.1
3UTR-3UTR TCA 90 bp AGGGATTTAACTCTGAGGTTTCCAGCAGCAGGCTTGGACTGGGCCCTGAAAACCGGCATCATGGTCTTGTaGAGGTGGAACAGGAGCGTG +
Preference number: 2 (lower is better)
Translates to: RDLTLRFPAAGLDWALKTGIMVL*RWNRSV
Trigger: CACGCTCCTGTTCCACCTTCACAAGACCATGATGCC...GGTTTTCAGGGCCCAGTCCAAGCCTGCTGCTGGAAACCTCAGAGTTAAATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
3UTR-3UTR TCA 90 bp AGGGATTTAACTCTGAGGTTTCCAGCAGCAGGCTTGGACTGGGCCCTGAAAACCCCCTGCTCAGGACCGTaGATAGAGACACTGCTTTGG +
Preference number: 2 (lower is better)
Translates to: RDLTLRFPAAGLDWALKTPCSGP*IETLLW
Trigger: CCAAAGCAGTGTCTCTATTCACGGTCCTGAGCAGGG...GGTTTTCAGGGCCCAGTCCAAGCCTGCTGCTGGAAACCTCAGAGTTAAATCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
3UTR-3UTR CCA 90 bp GAGCAGAGACTTGAAGGAGGGAGAGCGGGAGCCATGCAGCTGTGTTGGGGAAGATGCTTTGGGGCATCATaGTCTTGTGAAGGTGGAACA +
Preference number: 2 (lower is better)
Translates to: EQRLEGGRAGAMQLCWGRCFGAS*SCEGGT
Trigger: TGTTCCACCTTCACAAGACCATGATGCCCCAAAGCA...TCTTCCCCAACACAGCTGCATGGCTCCCGCTCTCCCTCCTTCAAGTCTCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
3UTR-3UTR CCA 90 bp GAAGGAGGGAGAGCGGGAGCCATGCAGCTGTGTTGGGGAAGAAGCAGAGAAGTGTGCTTTGGGGCATCATaGTCTTGTGAAGGTGGAACA +
Preference number: 2 (lower is better)
Translates to: EGGRAGAMQLCWGRSREVCFGAS*SCEGGT
Trigger: TGTTCCACCTTCACAAGACCATGATGCCCCAAAGCA...CACTTCTCTGCTTCTTCCCCAACACAGCTGCATGGCTCCCGCTCTCCCTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
3UTR-3UTR TCA 90 bp AGAGACACTGCTTTGGGGCATCATGGTCTTGTGAAGGTGGAACAGGAGCGTGTGCTCCTTCTCTCAGGCTaGGCTTCTCAAGAAAGGAGG +
Preference number: 2 (lower is better)
Translates to: RDTALGHHGLVKVEQERVLLLSG*ASQERR
Trigger: CCTCCTTTCTTGAGAAGCTCAGCCTGAGAGAAGGAG...CACACGCTCCTGTTCCACCTTCACAAGACCATGATGCCCCAAAGCAGTGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
ENST00000569629.1
3UTR-3UTR TCA 90 bp GAAGGAGGGAGAGCGGGAGCCATGCAGCTGTGTTGGGGAAGAAGCAGAGAAGTGAAGAATCACTGTGGCTaGAAAATGAAAGCCAGAGGA +
Preference number: 2 (lower is better)
Translates to: EGGRAGAMQLCWGRSREVKNHCG*KMKARG
Trigger: TCCTCTGGCTTTCATTTTTCAGCCACAGTGATTCTT...CACTTCTCTGCTTCTTCCCCAACACAGCTGCATGGCTCCCGCTCTCCCTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
3UTR-3UTR TCA 90 bp ACAAGAAGCATGGTACTTGCATCTGCTGCTGAGGGCCTCAGAGTGCTTAGTCAGCCAGGAGGAAAGCTATaGGAAGTGGAGCAGCAGAAG +
Preference number: 2 (lower is better)
Translates to: TRSMVLASAAEGLRVLSQPGGKL*EVEQQK
Trigger: CTTCTGCTGCTCCACTTCTCATAGCTTTCCTCCTGG...CTGACTAAGCACTCTGAGGCCCTCAGCAGCAGATGCAAGTACCATGCTTCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565230.5
3UTR-3UTR CCA 90 bp GAGCAGAGACTTGAAGGAGGGAGAGCGGGAGCCATGCAGCTGTGTTGGGGAAGAACCATCTCATGTAAGTaGACACATGCATTTTGGAGG +
Preference number: 2 (lower is better)
Translates to: EQRLEGGRAGAMQLCWGRTISCK*THAFWR
Trigger: CCTCCAAAATGCATGTGTCCACTTACATGAGATGGT...TCTTCCCCAACACAGCTGCATGGCTCCCGCTCTCCCTCCTTCAAGTCTCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
3UTR-3UTR TCA 90 bp CTGAATATGAGTTGTAAAGGGCAGTCATCGAGGGCTCCTCAATGTTGGGCTGTGCTCCTTCTCTCAGGCTaGGCTTCTCAAGAAAGGAGG +
Preference number: 2 (lower is better)
Translates to: LNMSCKGQSSRAPQCWAVLLLSG*ASQERR
Trigger: CCTCCTTTCTTGAGAAGCTCAGCCTGAGAGAAGGAG...CACAGCCCAACATTGAGGAGCCCTCGATGACTGCCCTTTACAACTCATATTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
3UTR-3UTR TCA 90 bp ACCGTGAATAGAGACACTGCTTTGGGGCATCATGGTCTTGTGAAGGTGGAACAGCTCCTTCTCTCAGGCTaGGCTTCTCAAGAAAGGAGG +
Preference number: 2 (lower is better)
Translates to: TVNRDTALGHHGLVKVEQLLLSG*ASQERR
Trigger: CCTCCTTTCTTGAGAAGCTCAGCCTGAGAGAAGGAG...CTGTTCCACCTTCACAAGACCATGATGCCCCAAAGCAGTGTCTCTATTCACGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
ENST00000569629.1
3UTR-3UTR CCA 90 bp AGGGATTTAACTCTGAGGTTTCCAGCAGCAGGCTTGGACTGGGCCCTGAAAACCTGCTTTGGGGCATCATaGTCTTGTGAAGGTGGAACA +
Preference number: 2 (lower is better)
Translates to: RDLTLRFPAAGLDWALKTCFGAS*SCEGGT
Trigger: TGTTCCACCTTCACAAGACCATGATGCCCCAAAGCA...GGTTTTCAGGGCCCAGTCCAAGCCTGCTGCTGGAAACCTCAGAGTTAAATCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
3UTR-3UTR CCA 90 bp AGGGATTTAACTCTGAGGTTTCCAGCAGCAGGCTTGGACTGGGCCCTGAAAACCCTCAATGTTGGGCTGTaGCAGCATTTCTACCACAAG +
Preference number: 2 (lower is better)
Translates to: RDLTLRFPAAGLDWALKTLNVGL*QHFYHK
Trigger: CTTGTGGTAGAAATGCTGCCACAGCCCAACATTGAG...GGTTTTCAGGGCCCAGTCCAAGCCTGCTGCTGGAAACCTCAGAGTTAAATCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
3UTR-3UTR CCA 90 bp GAGCAGAGACTTGAAGGAGGGAGAGCGGGAGCCATGCAGCTGTGTTGGGGAAGAAGGAATCTTGCAATCTaGTTGTTTAACTGTTGGCAG +
Preference number: 2 (lower is better)
Translates to: EQRLEGGRAGAMQLCWGRRNLAI*LFNCWQ
Trigger: CTGCCAACAGTTAAACAACCAGATTGCAAGATTCCT...TCTTCCCCAACACAGCTGCATGGCTCCCGCTCTCCCTCCTTCAAGTCTCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
3UTR-3UTR GCA 90 bp GACTGTACAAGAAGCATGGTACTTGCATCTGCTGCTGAGGGCCTCAGAGTGCTTAGCAGCAGAAGCCAGTaGTGGGCCTTAATTAGTTTG +
Preference number: 2 (lower is better)
Translates to: DCTRSMVLASAAEGLRVLSSRSQ*WALISL
Trigger: CAAACTAATTAAGGCCCAGCACTGGCTTCTGCTGCT...AAGCACTCTGAGGCCCTCAGCAGCAGATGCAAGTACCATGCTTCTTGTACAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565230.5
3UTR CAA 90 bp TTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTaGCATCTGCTGCTGAGGGCCTCAGAGTGCTTCTGCTCACAGTGG +
Preference number: 2 (lower is better)
Translates to: FIWLLVLQTVQEAWY*HLLLRASECFCSQW
Trigger: CCACTGTGAGCAGAAGCACTCTGAGGCCCTCAGCAGCAGATGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
3UTR CAA 90 bp GGTCCCTATGGCTCTCCTACTCAAACAGCAAATCCTATAGTTGGGTaGCCTCCTTGCCTCCCAGTGATGAGCCCATATGACATTTTACAG +
Preference number: 2 (lower is better)
Translates to: GPYGSPTQTANPIVG*PPCLPVMSPYDILQ
Trigger: CTGTAAAATGTCATATGGGCTCATCACTGGGAGGCAAGGAGGCAACCCAACTATAGGATTTGCTGTTTGAGTAGGAGAGCCATAGGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR-3UTR TCA 90 bp TTTGCTGAAAGTGTTCCAGCTTTGGCCTTTGGGAGCTCTTTCAGTTGGTTCCTGAATCTTGCACTGCCATaGAAAGTGAGGGCTGCCTGT +
Preference number: 2 (lower is better)
Translates to: FAESVPALAFGSSFSWFLNLALP*KVRAAC
Trigger: ACAGGCAGCCCTCACTTTTCATGGCAGTGCAAGATT...CAGGAACCAACTGAAAGAGCTCCCAAAGGCCAAAGCTGGAACACTTTCAGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR-3UTR TCA 90 bp ATCCCATCCAGGATACCTGTTACATTTACTTGTCATATCTCCTCAAGCTTCTCTGGCAGGAGAATCACTTaGACCCTGGAGGCGGGGGTT +
Preference number: 2 (lower is better)
Translates to: IPSRIPVTFTCHISSSFSGRRIT*TLEAGV
Trigger: AACCCCCGCCTCCAGGGTTCAAGTGATTCTCCTGCC...AGAGAAGCTTGAGGAGATATGACAAGTAAATGTAACAGGTATCCTGGATGGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR-3UTR CCA 90 bp AGGGATTTAACTCTGAGGTTTCCAGCAGCAGGCTTGGACTGGGCCCTGAAAACCACCATCTCATGTAAGTaGACACATGCATTTTGGAGG +
Preference number: 2 (lower is better)
Translates to: RDLTLRFPAAGLDWALKTTISCK*THAFWR
Trigger: CCTCCAAAATGCATGTGTCCACTTACATGAGATGGT...GGTTTTCAGGGCCCAGTCCAAGCCTGCTGCTGGAAACCTCAGAGTTAAATCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
3UTR-3UTR CCA 90 bp TTTGCTGAAAGTGTTCCAGCTTTGGCCTTTGGGAGCTCTTTCAGTTGGTTCCTGTGGAGACTGCTTTCCTaGGTTTCAGGTTGCACAGTC +
Preference number: 2 (lower is better)
Translates to: FAESVPALAFGSSFSWFLWRLLS*VSGCTV
Trigger: GACTGTGCAACCTGAAACCCAGGAAAGCAGTCTCCA...CAGGAACCAACTGAAAGAGCTCCCAAAGGCCAAAGCTGGAACACTTTCAGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR CAA 90 bp GACTATGGAGACTGCTTTCCTGGGTTTCAGGTTGCACAGTCATTTTaGCAATCTTGCACTGCCATGAAAAGTGAGGGCTGCCTGTATTCG +
Preference number: 2 (lower is better)
Translates to: DYGDCFPGFQVAQSF*QSCTAMKSEGCLYS
Trigger: CGAATACAGGCAGCCCTCACTTTTCATGGCAGTGCAAGATTGCAAAAATGACTGTGCAACCTGAAACCCAGGAAAGCAGTCTCCATAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR CAA 90 bp TTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTaGCATCTGCTGCTGAGGGCCTCAGAGTGCTTAGTCAGGCCTTCT +
Preference number: 2 (lower is better)
Translates to: FIWLLVLQTVQEAWY*HLLLRASECLVRPS
Trigger: AGAAGGCCTGACTAAGCACTCTGAGGCCCTCAGCAGCAGATGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565230.5
3UTR-3UTR CCA 90 bp AGGGATTTAACTCTGAGGTTTCCAGCAGCAGGCTTGGACTGGGCCCTGAAAACCTGGTTGTTTAACTGTTaGCAGTGTGAAATTGGTCAG +
Preference number: 2 (lower is better)
Translates to: RDLTLRFPAAGLDWALKTWLFNC*QCEIGQ
Trigger: CTGACCAATTTCACACTGCCAACAGTTAAACAACCA...GGTTTTCAGGGCCCAGTCCAAGCCTGCTGCTGGAAACCTCAGAGTTAAATCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
3UTR-3UTR CCA 90 bp CAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGGTGTCCTGATGTGTTAAGAAACATTTCCTaGGAGGCTGTTGTATTCCTG +
Preference number: 2 (lower is better)
Translates to: QFVAYGESKTMEERCPDVLRNIS*EAVVFL
Trigger: CAGGAATACAACAGCCTCCCAGGAAATGTTTCTTAA...CACATCAGGACACCTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279477.11
3UTR-3UTR TCA 90 bp ATGTCGTTTTTCTCTTCCAGCATCCCATCCAGGATACCTGTTACATTTACTTGTGGCATCATGGTCTTGTaGAGGTGGAACAGGAGCGTG +
Preference number: 2 (lower is better)
Translates to: MSFFSSSIPSRIPVTFTCGIMVL*RWNRSV
Trigger: CACGCTCCTGTTCCACCTTCACAAGACCATGATGCC...ACAAGTAAATGTAACAGGTATCCTGGATGGGATGCTGGAAGAGAAAAACGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR-3UTR GCA 90 bp AGGGATTTAACTCTGAGGTTTCCAGCAGCAGGCTTGGACTGGGCCCTGAAAACCGAAATTGGCAAGCACTaGAAAACAGCTTTTGGTTTT +
Preference number: 2 (lower is better)
Translates to: RDLTLRFPAAGLDWALKTEIGKH*KTAFGF
Trigger: AAAACCAAAAGCTGTTTTGCAGTGCTTGCCAATTTC...GGTTTTCAGGGCCCAGTCCAAGCCTGCTGCTGGAAACCTCAGAGTTAAATCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
3UTR-3UTR GCA 90 bp GTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCATCTCTGAGGGCCTCAGAGTaGTTCTGCTCACAGTGGACA +
Preference number: 2 (lower is better)
Translates to: VYLAFGSADCTRSMVLASLRASE*FCSQWT
Trigger: TGTCCACTGTGAGCAGAAGCACTCTGAGGCCCTCAG...AGATGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
3UTR-3UTR GCA 90 bp AGAAGTGAAAATGCTGCAAGTGAGGTTCAAATTGAATGTGAGTGGAATTCTAGACCTGGAGGCGGGGGTTaGAGTGAGCCAAGATCACGA +
Preference number: 2 (lower is better)
Translates to: RSENAASEVQIECEWNSRPGGGG*SEPRSR
Trigger: TCGTGATCTTGGCTCACTGCAACCCCCGCCTCCAGG...TCTAGAATTCCACTCACATTCAATTTGAACCTCACTTGCAGCATTTTCACTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR-3UTR TCA 90 bp GATTCAGTCACCTCCTACCAGGCCCATCCCACAACACATGCAGATTACAATTTACTTTCTTTTTGGGTTTaGGGGATAGGATGCTTGGAC +
Preference number: 2 (lower is better)
Translates to: DSVTSYQAHPTTHADYNLLSFWV*GIGCLD
Trigger: GTCCAAGCATCCTATCCCTCAAACCCAAAAAGAAAG...TAAATTGTAATCTGCATGTGTTGTGGGATGGGCCTGGTAGGAGGTGACTGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR-3UTR GCA 90 bp AGAAGTGAAAATGCTGCAAGTGAGGTTCAAATTGAATGTGAGTGGAATTCTAGAGGAGAGCGGGAGCCATaGAGCTGTGTTGGGGAAGAA +
Preference number: 2 (lower is better)
Translates to: RSENAASEVQIECEWNSRGEREP*SCVGEE
Trigger: TTCTTCCCCAACACAGCTGCATGGCTCCCGCTCTCC...TCTAGAATTCCACTCACATTCAATTTGAACCTCACTTGCAGCATTTTCACTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR-3UTR CCA 90 bp AGAGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCAGCAGAAGCCAGTGCTaGGCCTTAATTAGTTTGGGC +
Preference number: 2 (lower is better)
Translates to: RGLFGFWFCRLYKKHGTCSRSQC*ALISLG
Trigger: GCCCAAACTAATTAAGGCCCAGCACTGGCTTCTGCT...GCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565230.5
3UTR CAA 90 bp TCTGAGGTTTCCAGCAGCAGGCTTGGACTGGGCCCTGAAAACCAATaGTTAAATTTCAGGAATCTTGCAATCTGGTTGTTTAACTGTTGG +
Preference number: 2 (lower is better)
Translates to: SEVSSSRLGLGPENQ*LNFRNLAIWLFNCW
Trigger: CCAACAGTTAAACAACCAGATTGCAAGATTCCTGAAATTTAACAATTGGTTTTCAGGGCCCAGTCCAAGCCTGCTGCTGGAAACCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
3UTR CAA 90 bp CTCGTCATGATCAGTAACCAGTCATGTTGTGTCTTTCAAAGTCTGTaGGTGATTGGTCCCTATGGCTCTCCTACTCAAACAGCAAATCCT +
Preference number: 2 (lower is better)
Translates to: LVMISNQSCCVFQSL*VIGPYGSPTQTANP
Trigger: AGGATTTGCTGTTTGAGTAGGAGAGCCATAGGGACCAATCACCAACAGACTTTGAAAGACACAACATGACTGGTTACTGATCATGACGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR-3UTR TCA 90 bp AGAATGATCATTGTTTTTCTGATTGACTATGGAGACTGCTTTCCTGGGTTTCAGCTCCTTCTCTCAGGCTaGGCTTCTCAAGAAAGGAGG +
Preference number: 2 (lower is better)
Translates to: RMIIVFLIDYGDCFPGFQLLLSG*ASQERR
Trigger: CCTCCTTTCTTGAGAAGCTCAGCCTGAGAGAAGGAG...CTGAAACCCAGGAAAGCAGTCTCCATAGTCAATCAGAAAAACAATGATCATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR-3UTR TCA 90 bp GCTGCAAGTGAGGTTCAAATTGAATGTGAGTGGAATTCTAGAAGTACAAATAGTCCCTGCTCAGGACCGTaGATAGAGACACTGCTTTGG +
Preference number: 2 (lower is better)
Translates to: AASEVQIECEWNSRSTNSPCSGP*IETLLW
Trigger: CCAAAGCAGTGTCTCTATTCACGGTCCTGAGCAGGG...ACTATTTGTACTTCTAGAATTCCACTCACATTCAATTTGAACCTCACTTGCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR-3UTR TCA 90 bp AGAAGTGAAAATGCTGCAAGTGAGGTTCAAATTGAATGTGAGTGGAATTCTAGACACTGCCATGAAAAGTaGGGGCTGCCTGTATTCGGC +
Preference number: 2 (lower is better)
Translates to: RSENAASEVQIECEWNSRHCHEK*GLPVFG
Trigger: GCCGAATACAGGCAGCCCTCACTTTTCATGGCAGTG...TCTAGAATTCCACTCACATTCAATTTGAACCTCACTTGCAGCATTTTCACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR-3UTR GCA 90 bp AGAGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCCTTGAGAATCTGGACTaGAGTTTGTGGCTTACGGAG +
Preference number: 2 (lower is better)
Translates to: RGLFGFWFCRLYKKHGTCLENLD*SLWLTE
Trigger: CTCCGTAAGCCACAAACTGCAGTCCAGATTCTCAAG...GCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
3UTR-3UTR CCA 90 bp GTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCATCTCAGTGGACAGTGAAGTaGAGTTGGCATAACATGGGG +
Preference number: 2 (lower is better)
Translates to: VYLAFGSADCTRSMVLASQWTVK*SWHNMG
Trigger: CCCCATGTTATGCCAACTCCACTTCACTGTCCACTG...AGATGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
3UTR-3UTR TCA 90 bp AGAATGATCATTGTTTTTCTGATTGACTATGGAGACTGCTTTCCTGGGTTTCAGACTGTGGCTGAAAAATaGAAGCCAGAGGAGTGGTCC +
Preference number: 2 (lower is better)
Translates to: RMIIVFLIDYGDCFPGFQTVAEK*KPEEWS
Trigger: GGACCACTCCTCTGGCTTTCATTTTTCAGCCACAGT...CTGAAACCCAGGAAAGCAGTCTCCATAGTCAATCAGAAAAACAATGATCATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR-3UTR CCA 90 bp TTCAGGAATCTTGCAATCTGGTTGTTTAACTGTTGGCAGTGTGAAATTGGTCAGCTCAATGTTGGGCTGTaGCAGCATTTCTACCACAAG +
Preference number: 2 (lower is better)
Translates to: FRNLAIWLFNCWQCEIGQLNVGL*QHFYHK
Trigger: CTTGTGGTAGAAATGCTGCCACAGCCCAACATTGAG...CTGACCAATTTCACACTGCCAACAGTTAAACAACCAGATTGCAAGATTCCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
3UTR-3UTR CCA 90 bp AGAATGATCATTGTTTTTCTGATTGACTATGGAGACTGCTTTCCTGGGTTTCAGAGGGCTCCTCAATGTTaGGCTGTGGCAGCATTTCTA +
Preference number: 2 (lower is better)
Translates to: RMIIVFLIDYGDCFPGFQRAPQC*AVAAFL
Trigger: TAGAAATGCTGCCACAGCCCAACATTGAGGAGCCCT...CTGAAACCCAGGAAAGCAGTCTCCATAGTCAATCAGAAAAACAATGATCATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR-3UTR CCA 90 bp GATTCAGTCACCTCCTACCAGGCCCATCCCACAACACATGCAGATTACAATTTATGGTTGTTTAACTGTTaGCAGTGTGAAATTGGTCAG +
Preference number: 2 (lower is better)
Translates to: DSVTSYQAHPTTHADYNLWLFNC*QCEIGQ
Trigger: CTGACCAATTTCACACTGCCAACAGTTAAACAACCA...TAAATTGTAATCTGCATGTGTTGTGGGATGGGCCTGGTAGGAGGTGACTGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR-3UTR TCA 90 bp TTCAGGAATCTTGCAATCTGGTTGTTTAACTGTTGGCAGTGTGAAATTGGTCAGCTTTCTTTTTGGGTTTaGGGGATAGGATGCTTGGAC +
Preference number: 2 (lower is better)
Translates to: FRNLAIWLFNCWQCEIGQLSFWV*GIGCLD
Trigger: GTCCAAGCATCCTATCCCTCAAACCCAAAAAGAAAG...CTGACCAATTTCACACTGCCAACAGTTAAACAACCAGATTGCAAGATTCCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
3UTR-3UTR TCA 90 bp ATCCCATCCAGGATACCTGTTACATTTACTTGTCATATCTCCTCAAGCTTCTCTCTCATGAGAACTCACTaGGATCTTATGAGAACTCAC +
Preference number: 2 (lower is better)
Translates to: IPSRIPVTFTCHISSSFSLMRTH*DLMRTH
Trigger: GTGAGTTCTCATAAGATCTCAGTGAGTTCTCATGAG...AGAGAAGCTTGAGGAGATATGACAAGTAAATGTAACAGGTATCCTGGATGGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR-3UTR CCA 90 bp ATCCCATCCAGGATACCTGTTACATTTACTTGTCATATCTCCTCAAGCTTCTCTGGAAACTTACAACCATaGTGGAAGGAGAAAAGGAAG +
Preference number: 2 (lower is better)
Translates to: IPSRIPVTFTCHISSSFSGNLQP*WKEKRK
Trigger: CTTCCTTTTCTCCTTCCACCATGGTTGTAAGTTTCC...AGAGAAGCTTGAGGAGATATGACAAGTAAATGTAACAGGTATCCTGGATGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR-3UTR GCA 90 bp ATGTCGTTTTTCTCTTCCAGCATCCCATCCAGGATACCTGTTACATTTACTTGTCCCGATGTTGCAGAATaGCTCCTTATTGAAATTTGT +
Preference number: 2 (lower is better)
Translates to: MSFFSSSIPSRIPVTFTCPDVAE*LLIEIC
Trigger: ACAAATTTCAATAAGGAGGCATTCTGCAACATCGGG...ACAAGTAAATGTAACAGGTATCCTGGATGGGATGCTGGAAGAGAAAAACGACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR-3UTR TCA 90 bp ATGTCGTTTTTCTCTTCCAGCATCCCATCCAGGATACCTGTTACATTTACTTGTGAAGAAGCAGAGAAGTaGTATGATTTGACTTTTCCA +
Preference number: 2 (lower is better)
Translates to: MSFFSSSIPSRIPVTFTCEEAEK*YDLTFP
Trigger: TGGAAAAGTCAAATCATATCACTTCTCTGCTTCTTC...ACAAGTAAATGTAACAGGTATCCTGGATGGGATGCTGGAAGAGAAAAACGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR-3UTR CCA 90 bp AGAATGATCATTGTTTTTCTGATTGACTATGGAGACTGCTTTCCTGGGTTTCAGAGGAATCTTGCAATCTaGTTGTTTAACTGTTGGCAG +
Preference number: 2 (lower is better)
Translates to: RMIIVFLIDYGDCFPGFQRNLAI*LFNCWQ
Trigger: CTGCCAACAGTTAAACAACCAGATTGCAAGATTCCT...CTGAAACCCAGGAAAGCAGTCTCCATAGTCAATCAGAAAAACAATGATCATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR-3UTR CCA 90 bp GCTGCAAGTGAGGTTCAAATTGAATGTGAGTGGAATTCTAGAAGTACAAATAGTGCAAACTGCCACAAATaGGAGAGGAGTGGTAATAAA +
Preference number: 2 (lower is better)
Translates to: AASEVQIECEWNSRSTNSANCHK*ERSGNK
Trigger: TTTATTACCACTCCTCTCCCATTTGTGGCAGTTTGC...ACTATTTGTACTTCTAGAATTCCACTCACATTCAATTTGAACCTCACTTGCAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR-3UTR GCA 90 bp ATGCTGCAAGTGAGGTTCAAATTGAATGTGAGTGGAATTCTAGAAGTACAAATAAATGAAAAGAAACAATaGTTGCTCCGTGTATTAGCC +
Preference number: 2 (lower is better)
Translates to: MLQVRFKLNVSGILEVQINEKKQ*LLRVLA
Trigger: GGCTAATACACGGAGCAAGCATTGTTTCTTTTCATT...TATTTGTACTTCTAGAATTCCACTCACATTCAATTTGAACCTCACTTGCAGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR-3UTR CAA 90 bp GAGCAGAGACTTGAAGGAGGGAGAGCGGGAGCCATGCAGCTGTGTTGGGGAAGATTTCCAGCAGCAGGCTaGGACTGGGCCCTGAAAACC +
Preference number: 3 (lower is better)
Translates to: EQRLEGGRAGAMQLCWGRFPAAG*DWALKT
Trigger: GGTTTTCAGGGCCCAGTCCAAGCCTGCTGCTGGAAA...TCTTCCCCAACACAGCTGCATGGCTCCCGCTCTCCCTCCTTCAAGTCTCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
3UTR-3UTR CAA 90 bp GAAGGAGGGAGAGCGGGAGCCATGCAGCTGTGTTGGGGAAGAAGCAGAGAAGTGGAGGGCTCCTCAATGTaGGGCTGTGGCAGCATTTCT +
Preference number: 3 (lower is better)
Translates to: EGGRAGAMQLCWGRSREVEGSSM*GCGSIS
Trigger: AGAAATGCTGCCACAGCCCAACATTGAGGAGCCCTC...CACTTCTCTGCTTCTTCCCCAACACAGCTGCATGGCTCCCGCTCTCCCTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
3UTR CCA 72 bp GAAGGAGAAAAGGAAGCAGGCACCTTCTTCACATGGTaGCAGGAGGGAGAGAGAGAGAGAGAGCGAAGGGGG +
Preference number: 3 (lower is better)
Translates to: EGEKEAGTFFTW*QEGERERERRG
Trigger: CCCCCTTCGCTCTCTCTCTCTCTCTCCCTCCTGCCACCATGTGAAGAAGGTGCCTGCTTCCTTTTCTCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR GCA 72 bp GCATGGTACTTGCATCTGCTGCTGAGGGCCTCAGAGTaGTTCTGCTCACAGTGGACAGTGAAGTGGAGTTGG +
Preference number: 3 (lower is better)
Translates to: AWYLHLLLRASE*FCSQWTVKWSW
Trigger: CCAACTCCACTTCACTGTCCACTGTGAGCAGAAGCACTCTGAGGCCCTCAGCAGCAGATGCAAGTACCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
3UTR CCA 72 bp CTGCTGCTGAGGGCCTCAGAGTGCTTCTGCTCACAGTaGACAGTGAAGTGGAGTTGGCATAACATGGGGAGA +
Preference number: 3 (lower is better)
Translates to: LLLRASECFCSQ*TVKWSWHNMGR
Trigger: TCTCCCCATGTTATGCCAACTCCACTTCACTGTCCACTGTGAGCAGAAGCACTCTGAGGCCCTCAGCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
3UTR-3UTR CAA 90 bp GAGCAGAGACTTGAAGGAGGGAGAGCGGGAGCCATGCAGCTGTGTTGGGGAAGAGTTGGCAGTGTGAAATaGGTCAGGTTGGGAGTTATT +
Preference number: 3 (lower is better)
Translates to: EQRLEGGRAGAMQLCWGRVGSVK*VRLGVI
Trigger: AATAACTCCCAACCTGACCAATTTCACACTGCCAAC...TCTTCCCCAACACAGCTGCATGGCTCCCGCTCTCCCTCCTTCAAGTCTCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
3UTR GCA 72 bp TACTTGCATCTGCTGCTGAGGGCCTCAGAGTGCTTCTaGTCACAGTGGACAGTGAAGTGGAGTTGGCATAAC +
Preference number: 3 (lower is better)
Translates to: YLHLLLRASECF*SQWTVKWSWHN
Trigger: GTTATGCCAACTCCACTTCACTGTCCACTGTGAGCAGAAGCACTCTGAGGCCCTCAGCAGCAGATGCAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
3UTR-3UTR CAA 90 bp GAGCAGAGACTTGAAGGAGGGAGAGCGGGAGCCATGCAGCTGTGTTGGGGAAGATCTTTCTTTTTGGGTTaGAGGGATAGGATGCTTGGA +
Preference number: 3 (lower is better)
Translates to: EQRLEGGRAGAMQLCWGRSFFLG*RDRMLG
Trigger: TCCAAGCATCCTATCCCTCAAACCCAAAAAGAAAGA...TCTTCCCCAACACAGCTGCATGGCTCCCGCTCTCCCTCCTTCAAGTCTCTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
3UTR-3UTR CAA 90 bp AGGGATTTAACTCTGAGGTTTCCAGCAGCAGGCTTGGACTGGGCCCTGAAAACCAATAGAGACACTGCTTaGGGGCATCATGGTCTTGTG +
Preference number: 3 (lower is better)
Translates to: RDLTLRFPAAGLDWALKTNRDTA*GHHGLV
Trigger: CACAAGACCATGATGCCCCAAAGCAGTGTCTCTATT...GGTTTTCAGGGCCCAGTCCAAGCCTGCTGCTGGAAACCTCAGAGTTAAATCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
3UTR-3UTR CAA 90 bp GAGCAGAGACTTGAAGGAGGGAGAGCGGGAGCCATGCAGCTGTGTTGGGGAAGAAATCTTGCAATCTGGTaGTTTAACTGTTGGCAGTGT +
Preference number: 3 (lower is better)
Translates to: EQRLEGGRAGAMQLCWGRNLAIW*FNCWQC
Trigger: ACACTGCCAACAGTTAAACAACCAGATTGCAAGATT...TCTTCCCCAACACAGCTGCATGGCTCCCGCTCTCCCTCCTTCAAGTCTCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
3UTR GCA 72 bp CAGCTTTGGCCTTTGGGAGCTCTTTCAGTTGGTTCCTaGGCCTCTTTGATGTACTCCAGTCACTGTGGGTTT +
Preference number: 3 (lower is better)
Translates to: QLWPLGALSVGS*ASLMYSSHCGF
Trigger: AAACCCACAGTGACTGGAGTACATCAAAGAGGCGCAGGAACCAACTGAAAGAGCTCCCAAAGGCCAAAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR CCA 72 bp GCCTCAGAGTGCTTCTGCTCACAGTGGACAGTGAAGTaGAGTTGGCATAACATGGGGAGAGAGGAAGAGAAA +
Preference number: 3 (lower is better)
Translates to: ASECFCSQWTVK*SWHNMGREEEK
Trigger: TTTCTCTTCCTCTCTCCCCATGTTATGCCAACTCCACTTCACTGTCCACTGTGAGCAGAAGCACTCTGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
3UTR CCA 72 bp GACTCACAGTTCCACAGGCTTAACAGGAAGCATGACTaGGAGGCCTCAGGAAACTTACAACCATGGTGGAAG +
Preference number: 3 (lower is better)
Translates to: DSQFHRLNRKHD*EASGNLQPWWK
Trigger: CTTCCACCATGGTTGTAAGTTTCCTGAGGCCTCCCAGTCATGCTTCCTGTTAAGCCTGTGGAACTGTGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR CCA 72 bp AGTGTTCCAGCTTTGGCCTTTGGGAGCTCTTTCAGTTaGTTCCTGCGCCTCTTTGATGTACTCCAGTCACTG +
Preference number: 3 (lower is better)
Translates to: SVPALAFGSSFS*FLRLFDVLQSL
Trigger: CAGTGACTGGAGTACATCAAAGAGGCGCAGGAACCAACTGAAAGAGCTCCCAAAGGCCAAAGCTGGAACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR GCA 72 bp CAGATAGGCAGCCAGAGGGAGGTAGTAAACGCAAACTaGCACAAATGGGAGAGGAGTGGTAATAAAAGGGCT +
Preference number: 3 (lower is better)
Translates to: QIGSQREVVNAN*HKWERSGNKRA
Trigger: AGCCCTTTTATTACCACTCCTCTCCCATTTGTGGCAGTTTGCGTTTACTACCTCCCTCTGGCTGCCTATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR CCA 72 bp ATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATaGTACTTGCATCTGCTGCTGAGGGCCTCAGAGTGC +
Preference number: 3 (lower is better)
Translates to: IWLLVLQTVQEA*YLHLLLRASEC
Trigger: GCACTCTGAGGCCCTCAGCAGCAGATGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000279477.11
ENST00000562014.5
ENST00000565087.5
ENST00000565230.5
ENST00000566055.5
ENST00000569387.5
3UTR-3UTR CAA 90 bp AGGGATTTAACTCTGAGGTTTCCAGCAGCAGGCTTGGACTGGGCCCTGAAAACCAATCTTGCAATCTGGTaGTTTAACTGTTGGCAGTGT +
Preference number: 3 (lower is better)
Translates to: RDLTLRFPAAGLDWALKTNLAIW*FNCWQC
Trigger: ACACTGCCAACAGTTAAACAACCAGATTGCAAGATT...GGTTTTCAGGGCCCAGTCCAAGCCTGCTGCTGGAAACCTCAGAGTTAAATCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
3UTR-3UTR CAA 90 bp AGGGATTTAACTCTGAGGTTTCCAGCAGCAGGCTTGGACTGGGCCCTGAAAACCACTGCAAAACAGCTTTaGGTTTTTCCCTTTCAGAAA +
Preference number: 3 (lower is better)
Translates to: RDLTLRFPAAGLDWALKTTAKQL*VFPFQK
Trigger: TTTCTGAAAGGGAAAAACCAAAAGCTGTTTTGCAGT...GGTTTTCAGGGCCCAGTCCAAGCCTGCTGCTGGAAACCTCAGAGTTAAATCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
3UTR-3UTR CAA 90 bp AGAGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCAATCTGGACTGCAGTTaGTGGCTTACGGAGAGTCCA +
Preference number: 3 (lower is better)
Translates to: RGLFGFWFCRLYKKHGTCNLDCS*WLTESP
Trigger: TGGACTCTCCGTAAGCCACAAACTGCAGTCCAGATT...GCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
3UTR GCA 72 bp ACTCAAACAGCAAATCCTATAGTTGGGTTGCCTCCTTaGCTCCCAGTGATGAGCCCATATGACATTTTACAG +
Preference number: 3 (lower is better)
Translates to: TQTANPIVGLPP*LPVMSPYDILQ
Trigger: CTGTAAAATGTCATATGGGCTCATCACTGGGAGGCAAGGAGGCAACCCAACTATAGGATTTGCTGTTTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR TCA 72 bp AGGTTGCACAGTCATTTTTGCAATCTTGCACTGCCATaGAAAGTGAGGGCTGCCTGTATTCGGCATAATACT +
Preference number: 3 (lower is better)
Translates to: RLHSHFCNLALP*KVRAACIRHNT
Trigger: AGTATTATGCCGAATACAGGCAGCCCTCACTTTTCATGGCAGTGCAAGATTGCAAAAATGACTGTGCAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR GCA 72 bp TTCAGTCACCTCCTACCAGGCCCATCCCACAACACATaGAGATTACAATTTAAGATGAGATTTGGATGGAGA +
Preference number: 3 (lower is better)
Translates to: FSHLLPGPSHNT*RLQFKMRFGWR
Trigger: TCTCCATCCAAATCTCATCTTAAATTGTAATCTGCATGTGTTGTGGGATGGGCCTGGTAGGAGGTGACTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR-3UTR CAA 90 bp TTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCATCTGTGGGCCTTAATTAGTTaGGGCCAGTCATCTGGTCTA +
Preference number: 3 (lower is better)
Translates to: FIWLLVLQTVQEAWYLHLWALIS*GQSSGL
Trigger: TAGACCAGATGACTGGCCCAAACTAATTAAGGCCCA...CAGATGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565230.5
3UTR GCA 72 bp ACAGTTTTGAGGAGTTCTGGGCCCGATGTTGCAGAATaGCTCCTTATTGAAATTTGTCTGATGTTTTCCTCA +
Preference number: 3 (lower is better)
Translates to: TVLRSSGPDVAE*LLIEICLMFSS
Trigger: TGAGGAAAACATCAGACAAATTTCAATAAGGAGGCATTCTGCAACATCGGGCCCAGAACTCCTCAAAACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR-3UTR CAA 90 bp AGAATGATCATTGTTTTTCTGATTGACTATGGAGACTGCTTTCCTGGGTTTCAGAATAGAGACACTGCTTaGGGGCATCATGGTCTTGTG +
Preference number: 3 (lower is better)
Translates to: RMIIVFLIDYGDCFPGFQNRDTA*GHHGLV
Trigger: CACAAGACCATGATGCCCCAAAGCAGTGTCTCTATT...CTGAAACCCAGGAAAGCAGTCTCCATAGTCAATCAGAAAAACAATGATCATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR-3UTR CAA 90 bp AGAATGATCATTGTTTTTCTGATTGACTATGGAGACTGCTTTCCTGGGTTTCAGTCTTTCTTTTTGGGTTaGAGGGATAGGATGCTTGGA +
Preference number: 3 (lower is better)
Translates to: RMIIVFLIDYGDCFPGFQSFFLG*RDRMLG
Trigger: TCCAAGCATCCTATCCCTCAAACCCAAAAAGAAAGA...CTGAAACCCAGGAAAGCAGTCTCCATAGTCAATCAGAAAAACAATGATCATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR-3UTR CAA 90 bp AAAATATCTATCAAGTTGTGCATCAGACTTGACGCACAGTTTCTCCTGGTAGATTGGCCAATTGTTACCTaGAACCTTCTAAGTAGTGGT +
Preference number: 3 (lower is better)
Translates to: KISIKLCIRLDAQFLLVDWPIVT*NLLSSG
Trigger: ACCACTACTTAGAAGGTTCAAGGTAACAATTGGCCA...ATCTACCAGGAGAAACTGTGCGTCAAGTCTGATGCACAACTTGATAGATATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565076.1
3UTR TCA 72 bp CAGTCCACAAATCACCATGGTAATAAAAGCTCGTCATaGTCAGTAACCAGTCATGTTGTGTCTTTCAAAGTC +
Preference number: 3 (lower is better)
Translates to: QSTNHHGNKSSS*SVTSHVVSFKV
Trigger: GACTTTGAAAGACACAACATGACTGGTTACTGATCATGACGAGCTTTTATTACCATGGTGATTTGTGGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR-3UTR CAA 90 bp ATCCCATCCAGGATACCTGTTACATTTACTTGTCATATCTCCTCAAGCTTCTCTACTGCAAAACAGCTTTaGGTTTTTCCCTTTCAGAAA +
Preference number: 3 (lower is better)
Translates to: IPSRIPVTFTCHISSSFSTAKQL*VFPFQK
Trigger: TTTCTGAAAGGGAAAAACCAAAAGCTGTTTTGCAGT...AGAGAAGCTTGAGGAGATATGACAAGTAAATGTAACAGGTATCCTGGATGGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR-3UTR CAA 90 bp GTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCATCTTTAAACAATCAGATCTaGTGGGTGCTAATAGACCAA +
Preference number: 3 (lower is better)
Translates to: VYLAFGSADCTRSMVLASLNNQI*WVLIDQ
Trigger: TTGGTCTATTAGCACCCACAAGATCTGATTGTTTAA...AGATGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
3UTR-3UTR CAA 90 bp ATGTCGTTTTTCTCTTCCAGCATCCCATCCAGGATACCTGTTACATTTACTTGTCAAGTGAGGTTCAAATaGAATGTGAGTGGAATTCTA +
Preference number: 3 (lower is better)
Translates to: MSFFSSSIPSRIPVTFTCQVRFK*NVSGIL
Trigger: TAGAATTCCACTCACATTCAATTTGAACCTCACTTG...ACAAGTAAATGTAACAGGTATCCTGGATGGGATGCTGGAAGAGAAAAACGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR GCA 72 bp AGAATGATCATTGTTTTTCTGATTGACTATGGAGACTaGTTTCCTGGGTTTCAGGTTGCACAGTCATTTTTG +
Preference number: 3 (lower is better)
Translates to: RMIIVFLIDYGD*FPGFQVAQSFL
Trigger: CAAAAATGACTGTGCAACCTGAAACCCAGGAAAGCAGTCTCCATAGTCAATCAGAAAAACAATGATCATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR CCA 72 bp AATTTCAGGAATCTTGCAATCTGGTTGTTTAACTGTTaGCAGTGTGAAATTGGTCAGGTTGGGAGTTATTAC +
Preference number: 3 (lower is better)
Translates to: NFRNLAIWLFNC*QCEIGQVGSYY
Trigger: GTAATAACTCCCAACCTGACCAATTTCACACTGCCAACAGTTAAACAACCAGATTGCAAGATTCCTGAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
3UTR TCA 72 bp GAATTTTGCAACCAAGATGAAAGTGCAGTGAAGAAATaGGAAGTGAAAATGCTGCAAGTGAGGTTCAAATTG +
Preference number: 3 (lower is better)
Translates to: EFCNQDESAVKK*EVKMLQVRFKL
Trigger: CAATTTGAACCTCACTTGCAGCATTTTCACTTCTCATTTCTTCACTGCACTTTCATCTTGGTTGCAAAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381605.9
3UTR-3UTR CAA 90 bp ATGCTGCAAGTGAGGTTCAAATTGAATGTGAGTGGAATTCTAGAAGTACAAATAAATCTTGCAATCTGGTaGTTTAACTGTTGGCAGTGT +
Preference number: 3 (lower is better)
Translates to: MLQVRFKLNVSGILEVQINLAIW*FNCWQC
Trigger: ACACTGCCAACAGTTAAACAACCAGATTGCAAGATT...TATTTGTACTTCTAGAATTCCACTCACATTCAATTTGAACCTCACTTGCAGCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR TCA 90 bp GAAGGAGGGAGAGCGGGAGCCATGCAGCTGTGTTGGGGAAGAAGCAGAGAAGTGGGAGGCGTTTGGAGCTaGGTGTGGGGAAGGTTCTCG +
Preference number: 4 (lower is better)
Translates to: EGGRAGAMQLCWGRSREVGGVWS*VWGRFS
Trigger: CGAGAACCTTCCCCACACTCAGCTCCAAACGCCTCC...CACTTCTCTGCTTCTTCCCCAACACAGCTGCATGGCTCCCGCTCTCCCTCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR TCA 90 bp GGACTGCAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGGTGTCCTCGCCAGCTACCCCTGTaGGTCTCCCCAGCAGTAGCG +
Preference number: 4 (lower is better)
Translates to: GLQFVAYGESKTMEERCPRQLPL*VSPAVA
Trigger: CGCTACTGCTGGGGAGACTCACAGGGGTAGCTGGCG...AGGACACCTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTGCAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279477.11
ENST00000568365.1
CDS-3UTR CCA 90 bp AGAATCTGGACTGCAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGCGGGGGCAGAGGGTTTaGCACGCACAGACAGCTCGG +
Preference number: 4 (lower is better)
Translates to: RIWTAVCGLRRVQDDGGERGQRV*HAQTAR
Trigger: CCGAGCTGTCTGTGCGTGCCAAACCCTCTGCCCCCG...CTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTGCAGTCCAGATTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279477.11
ENST00000568365.1
CDS-3UTR CCA 90 bp GAGCAGAGACTTGAAGGAGGGAGAGCGGGAGCCATGCAGCTGTGTTGGGGAAGAAACCTCCAAGGTGGGTaGAACTCGGATGGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: EQRLEGGRAGAMQLCWGRNLQGG*NSDGLR
Trigger: TCTGAGGCCATCCGAGTTCCACCCACCTTGGAGGTT...TCTTCCCCAACACAGCTGCATGGCTCCCGCTCTCCCTCCTTCAAGTCTCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR TCA 90 bp GAGCAGAGACTTGAAGGAGGGAGAGCGGGAGCCATGCAGCTGTGTTGGGGAAGAACGGACTTTTCAGGCTaGATCACCTGTAGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: EQRLEGGRAGAMQLCWGRTDFSG*ITCSSS
Trigger: GGACGAGCTACAGGTGATTCAGCCTGAAAAGTCCGT...TCTTCCCCAACACAGCTGCATGGCTCCCGCTCTCCCTCCTTCAAGTCTCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR TCA 90 bp GAGCAGAGACTTGAAGGAGGGAGAGCGGGAGCCATGCAGCTGTGTTGGGGAAGACTCCTTCTCTCAGGCTaGGCTTCTCAAGAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: EQRLEGGRAGAMQLCWGRLLLSG*ASQERR
Trigger: CCTCCTTTCTTGAGAAGCTCAGCCTGAGAGAAGGAG...TCTTCCCCAACACAGCTGCATGGCTCCCGCTCTCCCTCCTTCAAGTCTCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR TCA 90 bp AGAGACACTGCTTTGGGGCATCATGGTCTTGTGAAGGTGGAACAGGAGCGTGTGGGAGGCGTTTGGAGCTaGGTGTGGGGAAGGTTCTCG +
Preference number: 4 (lower is better)
Translates to: RDTALGHHGLVKVEQERVGGVWS*VWGRFS
Trigger: CGAGAACCTTCCCCACACTCAGCTCCAAACGCCTCC...CACACGCTCCTGTTCCACCTTCACAAGACCATGATGCCCCAAAGCAGTGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
ENST00000569629.1
CDS-3UTR TCA 90 bp AGGGATTTAACTCTGAGGTTTCCAGCAGCAGGCTTGGACTGGGCCCTGAAAACCGGAGGCGTTTGGAGCTaGGTGTGGGGAAGGTTCTCG +
Preference number: 4 (lower is better)
Translates to: RDLTLRFPAAGLDWALKTGGVWS*VWGRFS
Trigger: CGAGAACCTTCCCCACACTCAGCTCCAAACGCCTCC...GGTTTTCAGGGCCCAGTCCAAGCCTGCTGCTGGAAACCTCAGAGTTAAATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR TCA 90 bp CTCTTGAGAATCTGGACTGCAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGACGCCAGCTACCCCTGTaGGTCTCCCCAGCAGTAGCG +
Preference number: 4 (lower is better)
Translates to: LLRIWTAVCGLRRVQDDGRQLPL*VSPAVA
Trigger: CGCTACTGCTGGGGAGACTCACAGGGGTAGCTGGCG...TCCATCGTCTTGGACTCTCCGTAAGCCACAAACTGCAGTCCAGATTCTCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279477.11
ENST00000568365.1
CDS-3UTR TCA 90 bp GAGCAGAGACTTGAAGGAGGGAGAGCGGGAGCCATGCAGCTGTGTTGGGGAAGAGGGCATAGCTTTTGCTaGCTGCTTGCTGCCCATCAT +
Preference number: 4 (lower is better)
Translates to: EQRLEGGRAGAMQLCWGRGHSFC*LLAAHH
Trigger: ATGATGGGCAGCAAGCAGTCAGCAAAAGCTATGCCC...TCTTCCCCAACACAGCTGCATGGCTCCCGCTCTCCCTCCTTCAAGTCTCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR CCA 90 bp CTGAATATGAGTTGTAAAGGGCAGTCATCGAGGGCTCCTCAATGTTGGGCTGTGCGGGGGCAGAGGGTTTaGCGCGCACAGACAGCTCAG +
Preference number: 4 (lower is better)
Translates to: LNMSCKGQSSRAPQCWAVRGQRV*RAQTAQ
Trigger: CTGAGCTGTCTGTGCGCGCCAAACCCTCTGCCCCCG...CACAGCCCAACATTGAGGAGCCCTCGATGACTGCCCTTTACAACTCATATTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR CCA 90 bp AGAGACACTGCTTTGGGGCATCATGGTCTTGTGAAGGTGGAACAGGAGCGTGTGGAGCCGTGCTCCTTCTaGTGCGCTGAGATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RDTALGHHGLVKVEQERVEPCSF*CAEISR
Trigger: CCTGGAGATCTCAGCGCACCAGAAGGAGCACGGCTC...CACACGCTCCTGTTCCACCTTCACAAGACCATGATGCCCCAAAGCAGTGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR TCA 90 bp CTGGACTGCAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGGTGTCACTTGCATCTGCTGCTaGGGGCCTCAGAGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: LDCSLWLTESPRRWRRGVTCICC*GPQSAS
Trigger: AGAAGCACTCTGAGGCCCTCAGCAGCAGATGCAAGT...GACACCTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTGCAGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR TCA 90 bp CTGAATATGAGTTGTAAAGGGCAGTCATCGAGGGCTCCTCAATGTTGGGCTGTGCACCTGCCACTCCTGTaGGTCTCCCCAGCAGTAGCG +
Preference number: 4 (lower is better)
Translates to: LNMSCKGQSSRAPQCWAVHLPLL*VSPAVA
Trigger: CGCTACTGCTGGGGAGACTCACAGGAGTGGCAGGTG...CACAGCCCAACATTGAGGAGCCCTCGATGACTGCCCTTTACAACTCATATTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381603.7
ENST00000381605.9
CDS-3UTR GCA 90 bp AGAGACACTGCTTTGGGGCATCATGGTCTTGTGAAGGTGGAACAGGAGCGTGTGGGAGAGCGGGAGCCATaGAGCTGTGTTGGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: RDTALGHHGLVKVEQERVGEREP*SCVGEE
Trigger: TTCTTCCCCAACACAGCTGCATGGCTCCCGCTCTCC...CACACGCTCCTGTTCCACCTTCACAAGACCATGATGCCCCAAAGCAGTGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR GCA 90 bp GGACTGCAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGGTGTCCTAGCAGCAGAAGCCAGTaGTGGGCCAGGAGCAGTATT +
Preference number: 4 (lower is better)
Translates to: GLQFVAYGESKTMEERCPSSRSQ*WARSSI
Trigger: AATACTGCTCCTGGCCCAGCACTGGCTTCTGCTGCT...AGGACACCTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTGCAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000568365.1
ENST00000569387.5
CDS-3UTR GCA 90 bp AGAGACACTGCTTTGGGGCATCATGGTCTTGTGAAGGTGGAACAGGAGCGTGTGGTTGGGTTGCCTCCTTaGCTCCCAGTGATGAGCCCA +
Preference number: 4 (lower is better)
Translates to: RDTALGHHGLVKVEQERVVGLPP*LPVMSP
Trigger: TGGGCTCATCACTGGGAGGCAAGGAGGCAACCCAAC...CACACGCTCCTGTTCCACCTTCACAAGACCATGATGCCCCAAAGCAGTGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR CCA 90 bp AGAGACACTGCTTTGGGGCATCATGGTCTTGTGAAGGTGGAACAGGAGCGTGTGGCCAGCGCTGCTTCATaGGTGATATCTGAGCCGTGC +
Preference number: 4 (lower is better)
Translates to: RDTALGHHGLVKVEQERVASAAS*VISEPC
Trigger: GCACGGCTCAGATATCACCCATGAAGCAGCGCTGGC...CACACGCTCCTGTTCCACCTTCACAAGACCATGATGCCCCAAAGCAGTGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR TCA 90 bp CTGAATATGAGTTGTAAAGGGCAGTCATCGAGGGCTCCTCAATGTTGGGCTGTGGGAGGCAGCAGAGACTaGGGGTCAGTCAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: LNMSCKGQSSRAPQCWAVGGSRD*GSVRPS
Trigger: AGAAGGCCTGACTGACCCTCAGTCTCTGCTGCCTCC...CACAGCCCAACATTGAGGAGCCCTCGATGACTGCCCTTTACAACTCATATTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR TCA 90 bp GGACTGCAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGGTGTCCTCCAGGAGGAAAGCTATaGGAAGTGGAGCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: GLQFVAYGESKTMEERCPPGGKL*EVEQQK
Trigger: CTTCTGCTGCTCCACTTCTCATAGCTTTCCTCCTGG...AGGACACCTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTGCAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000568365.1
ENST00000569387.5
CDS-3UTR TCA 90 bp TTTGCTGAAAGTGTTCCAGCTTTGGCCTTTGGGAGCTCTTTCAGTTGGTTCCTGCACCTGCCACTCCTGTaGGTCTCCCCAGCAGTAGCG +
Preference number: 4 (lower is better)
Translates to: FAESVPALAFGSSFSWFLHLPLL*VSPAVA
Trigger: CGCTACTGCTGGGGAGACTCACAGGAGTGGCAGGTG...CAGGAACCAACTGAAAGAGCTCCCAAAGGCCAAAGCTGGAACACTTTCAGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR GCA 90 bp TCTGGACTGCAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGGTGTAGCAGCAGAAGCCAGTaGTGGGCCAGGAGCAGTATT +
Preference number: 4 (lower is better)
Translates to: SGLQFVAYGESKTMEERCSSRSQ*WARSSI
Trigger: AATACTGCTCCTGGCCCAGCACTGGCTTCTGCTGCT...ACACCTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTGCAGTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000568365.1
ENST00000569387.5
CDS-3UTR GCA 90 bp CAGACTGTACAAGAAGCATGGTACTTGCATCTGCTGCTGAGGGCCTCAGAGTGCGGTCTCCTTCTGGGATaGAGTCAGGCCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: QTVQEAWYLHLLLRASECGLLLG*SQAFCF
Trigger: GAAGCAGAAGGCCTGACTGCATCCCAGAAGGAGACC...GCACTCTGAGGCCCTCAGCAGCAGATGCAAGTACCATGCTTCTTGTACAGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279477.11
CDS-3UTR GCA 90 bp TGCAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGGTGTCCTGATGCTGAGGGCCTCAGAGTaGTTCTGCTCACAGTGGACA +
Preference number: 4 (lower is better)
Translates to: CSLWLTESPRRWRRGVLMLRASE*FCSQWT
Trigger: TGTCCACTGTGAGCAGAAGCACTCTGAGGCCCTCAG...CATCAGGACACCTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR GCA 90 bp ATCTGGACTGCAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGGTGCTGAGGGCCTCAGAGTaGTTCTGCTCACAGTGGACA +
Preference number: 4 (lower is better)
Translates to: IWTAVCGLRRVQDDGGEVLRASE*FCSQWT
Trigger: TGTCCACTGTGAGCAGAAGCACTCTGAGGCCCTCAG...CACCTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTGCAGTCCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR GCA 90 bp TCTGGACTGCAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGGTGTCTGAGGGCCTCAGAGTaGTTCTGCTCACAGTGGACA +
Preference number: 4 (lower is better)
Translates to: SGLQFVAYGESKTMEERCLRASE*FCSQWT
Trigger: TGTCCACTGTGAGCAGAAGCACTCTGAGGCCCTCAG...ACACCTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTGCAGTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CCA 90 bp GGACTGCAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGGTGTCCTAACCTCCAAGGTGGGTaGAACTCGGATGGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: GLQFVAYGESKTMEERCPNLQGG*NSDGLR
Trigger: TCTGAGACCATCCGAGTTCCACCCACCTTGGAGGTT...AGGACACCTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTGCAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279477.11
ENST00000568365.1
CDS-3UTR TCA 90 bp AGGGATTTAACTCTGAGGTTTCCAGCAGCAGGCTTGGACTGGGCCCTGAAAACCACGGACTTTTCAGGCTaGATCACCTGTAGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: RDLTLRFPAAGLDWALKTTDFSG*ITCSSS
Trigger: GGACGAGCTACAGGTGATTCAGCCTGAAAAGTCCGT...GGTTTTCAGGGCCCAGTCCAAGCCTGCTGCTGGAAACCTCAGAGTTAAATCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR TCA 90 bp CAGACTGTACAAGAAGCATGGTACTTGCATCTGCTGCTGAGGGCCTCAGAGTGCCCAGGAGGAAAGCTATaGGAAGTGGAGCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: QTVQEAWYLHLLLRASECPGGKL*EVEQQK
Trigger: CTTCTGCTGCTCCACTTCTCATAGCTTTCCTCCTGG...GCACTCTGAGGCCCTCAGCAGCAGATGCAAGTACCATGCTTCTTGTACAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000279477.11
ENST00000562014.5
ENST00000565087.5
ENST00000565230.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR TCA 90 bp CAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGGTGTCCTGATGTGCCAGGAGGAAAGCTATaGGAAGTGGAGCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: QFVAYGESKTMEERCPDVPGGKL*EVEQQK
Trigger: CTTCTGCTGCTCCACTTCTCATAGCTTTCCTCCTGG...CACATCAGGACACCTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000568365.1
ENST00000569387.5
CDS-3UTR TCA 90 bp TCTGGACTGCAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGGTGTATGAATCCATCCCCATaGCCCAAACACCTCCCACCT +
Preference number: 4 (lower is better)
Translates to: SGLQFVAYGESKTMEERCMNPSP*PKHLPP
Trigger: AGGTGGGAGGTGTTTGGGTCATGGGGATGGATTCAT...ACACCTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTGCAGTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR GCA 90 bp ACCGTGAATAGAGACACTGCTTTGGGGCATCATGGTCTTGTGAAGGTGGAACAGGGAGAGCGGGAGCCATaGAGCTGTGTTGGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: TVNRDTALGHHGLVKVEQGEREP*SCVGEE
Trigger: TTCTTCCCCAACACAGCTGCATGGCTCCCGCTCTCC...CTGTTCCACCTTCACAAGACCATGATGCCCCAAAGCAGTGTCTCTATTCACGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR CCA 90 bp AGGGATTTAACTCTGAGGTTTCCAGCAGCAGGCTTGGACTGGGCCCTGAAAACCGCCATGCAGCTGTGTTaGGGAAGAAGCAGAGAAGTG +
Preference number: 4 (lower is better)
Translates to: RDLTLRFPAAGLDWALKTAMQLC*GRSREV
Trigger: CACTTCTCTGCTTCTTCCCCAACACAGCTGCATGGC...GGTTTTCAGGGCCCAGTCCAAGCCTGCTGCTGGAAACCTCAGAGTTAAATCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR CCA 90 bp CAGACTGTACAAGAAGCATGGTACTTGCATCTGCTGCTGAGGGCCTCAGAGTGCAACCTCCAAGGTGGGTaGAACTCGGATGGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: QTVQEAWYLHLLLRASECNLQGG*NSDGLR
Trigger: TCTGAGACCATCCGAGTTCCACCCACCTTGGAGGTT...GCACTCTGAGGCCCTCAGCAGCAGATGCAAGTACCATGCTTCTTGTACAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279477.11
ENST00000562014.5
CDS-3UTR CCA 90 bp GGACTGCAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGGTGTCCTGAAAGCTATGAGAAGTaGAGCAGCAGAAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: GLQFVAYGESKTMEERCPESYEK*SSRSQC
Trigger: GCACTGGCTTCTGCTGCTCCACTTCTCATAGCTTTC...AGGACACCTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTGCAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000568365.1
ENST00000569387.5
CDS-3UTR CCA 90 bp CTGGACTGCAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGGTGTCGAAAGCTATGAGAAGTaGAGCAGCAGAAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: LDCSLWLTESPRRWRRGVESYEK*SSRSQC
Trigger: GCACTGGCTTCTGCTGCTCCACTTCTCATAGCTTTC...GACACCTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTGCAGTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000568365.1
ENST00000569387.5
CDS-3UTR CCA 90 bp AGAATCTGGACTGCAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGGTGCTGGTCTCCTTCTaGGATGCAGTCAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: RIWTAVCGLRRVQDDGGEVLVSF*DAVRPS
Trigger: AGAAGGCCTGACTGCATCCCAGAAGGAGACCAGCAC...CTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTGCAGTCCAGATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279477.11
CDS-3UTR CCA 90 bp TGCAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGGTGTCCTGATGGAGAGTCCAAGACGATaGAGGAGAGGTGTCCTGATG +
Preference number: 4 (lower is better)
Translates to: CSLWLTESPRRWRRGVLMESPRR*RRGVLM
Trigger: CATCAGGACACCTCTCCTCCATCGTCTTGGACTCTC...CATCAGGACACCTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000568365.1
ENST00000569387.5
CDS-3UTR TCA 90 bp CTGAATATGAGTTGTAAAGGGCAGTCATCGAGGGCTCCTCAATGTTGGGCTGTGCACCTGCCACTCCTGTaGGTCCCAGCAATAGAGTCA +
Preference number: 4 (lower is better)
Translates to: LNMSCKGQSSRAPQCWAVHLPLL*VPAIES
Trigger: TGACTCTATTGCTGGGACTCACAGGAGTGGCAGGTG...CACAGCCCAACATTGAGGAGCCCTCGATGACTGCCCTTTACAACTCATATTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262929.9
CDS-3UTR TCA 90 bp ACCGTGAATAGAGACACTGCTTTGGGGCATCATGGTCTTGTGAAGGTGGAACAGGGCATCATGGTCTTGTaGAGGTGGAACAGGAGCGTG +
Preference number: 4 (lower is better)
Translates to: TVNRDTALGHHGLVKVEQGIMVL*RWNRSV
Trigger: CACGCTCCTGTTCCACCTTCACAAGACCATGATGCC...CTGTTCCACCTTCACAAGACCATGATGCCCCAAAGCAGTGTCTCTATTCACGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
ENST00000569629.1
CDS-3UTR TCA 90 bp ACCGTGAATAGAGACACTGCTTTGGGGCATCATGGTCTTGTGAAGGTGGAACAGCCCTGCTCAGGACCGTaGATAGAGACACTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: TVNRDTALGHHGLVKVEQPCSGP*IETLLW
Trigger: CCAAAGCAGTGTCTCTATTCACGGTCCTGAGCAGGG...CTGTTCCACCTTCACAAGACCATGATGCCCCAAAGCAGTGTCTCTATTCACGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
ENST00000569629.1
CDS-3UTR TCA 90 bp AGAGACACTGCTTTGGGGCATCATGGTCTTGTGAAGGTGGAACAGGAGCGTGTGACTGTGGCTGAAAAATaGAAGCCAGAGGAGTGGTCC +
Preference number: 4 (lower is better)
Translates to: RDTALGHHGLVKVEQERVTVAEK*KPEEWS
Trigger: GGACCACTCCTCTGGCTTTCATTTTTCAGCCACAGT...CACACGCTCCTGTTCCACCTTCACAAGACCATGATGCCCCAAAGCAGTGTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR GCA 90 bp GGACTGCAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGGTGTCCTCTTGAGAATCTGGACTaGAGTTTGTGGCTTACGGAG +
Preference number: 4 (lower is better)
Translates to: GLQFVAYGESKTMEERCPLENLD*SLWLTE
Trigger: CTCCGTAAGCCACAAACTGCAGTCCAGATTCTCAAG...AGGACACCTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTGCAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000568365.1
ENST00000569387.5
CDS-3UTR GCA 90 bp AGAATCTGGACTGCAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGGCCTCAGAGTGCTTCTaGTCACAGTGGACAGTGAAG +
Preference number: 4 (lower is better)
Translates to: RIWTAVCGLRRVQDDGGEASECF*SQWTVK
Trigger: CTTCACTGTCCACTGTGAGCAGAAGCACTCTGAGGC...CTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTGCAGTCCAGATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR GCA 90 bp TGGCCAATTGTTACCTTGAACCTTCTAAGTAGTGGTGACCCATGGAGTGTAGGACCGTGCTCCTTCTGGTaGGCTGAGATCTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: WPIVTLNLLSSGDPWSVGPCSFW*AEISRA
Trigger: TGCCCTGGAGATCTCAGCGCACCAGAAGGAGCACGG...TCCTACACTCCATGGGTCACCACTACTTAGAAGGTTCAAGGTAACAATTGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565076.1
CDS-3UTR GCA 90 bp GATTCAGTCACCTCCTACCAGGCCCATCCCACAACACATGCAGATTACAATTTACCTGGAGGCGGGGGTTaGAGTGAGCCAAGATCACGA +
Preference number: 4 (lower is better)
Translates to: DSVTSYQAHPTTHADYNLPGGGG*SEPRSR
Trigger: TCGTGATCTTGGCTCACTGCAACCCCCGCCTCCAGG...TAAATTGTAATCTGCATGTGTTGTGGGATGGGCCTGGTAGGAGGTGACTGAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR CCA 90 bp AGGGATTTAACTCTGAGGTTTCCAGCAGCAGGCTTGGACTGGGCCCTGAAAACCAGGGCTCCTCAATGTTaGGCTGTGGCAGCATTTCTA +
Preference number: 4 (lower is better)
Translates to: RDLTLRFPAAGLDWALKTRAPQC*AVAAFL
Trigger: TAGAAATGCTGCCACAGCCCAACATTGAGGAGCCCT...GGTTTTCAGGGCCCAGTCCAAGCCTGCTGCTGGAAACCTCAGAGTTAAATCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR CCA 90 bp GGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCATCCGGGGGCAGAGGGTTTaGCACGCACAGACAGCTCGG +
Preference number: 4 (lower is better)
Translates to: GLFGFWFCRLYKKHGTCIRGQRV*HAQTAR
Trigger: CCGAGCTGTCTGTGCGTGCCAAACCCTCTGCCCCCG...GATGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279477.11
CDS-3UTR CCA 90 bp CAGACTGTACAAGAAGCATGGTACTTGCATCTGCTGCTGAGGGCCTCAGAGTGCGAAAGCTATGAGAAGTaGAGCAGCAGAAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: QTVQEAWYLHLLLRASECESYEK*SSRSQC
Trigger: GCACTGGCTTCTGCTGCTCCACTTCTCATAGCTTTC...GCACTCTGAGGCCCTCAGCAGCAGATGCAAGTACCATGCTTCTTGTACAGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000279477.11
ENST00000562014.5
ENST00000565087.5
ENST00000565230.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CCA 90 bp TGCAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGGTGTCCTGATGGAAAGCTATGAGAAGTaGAGCAGCAGAAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: CSLWLTESPRRWRRGVLMESYEK*SSRSQC
Trigger: GCACTGGCTTCTGCTGCTCCACTTCTCATAGCTTTC...CATCAGGACACCTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000568365.1
ENST00000569387.5
CDS-3UTR CCA 90 bp CAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGGTGTCCTGATGTGCTGGACTGCAGTTTGTaGCTTACGGAGAGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: QFVAYGESKTMEERCPDVLDCSL*LTESPR
Trigger: TCTTGGACTCTCCGTAAGCCACAAACTGCAGTCCAG...CACATCAGGACACCTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000568365.1
ENST00000569387.5
CDS-3UTR CCA 90 bp CAGACTGTACAAGAAGCATGGTACTTGCATCTGCTGCTGAGGGCCTCAGAGTGCCAGTGGACAGTGAAGTaGAGTTGGCATAACATGGGG +
Preference number: 4 (lower is better)
Translates to: QTVQEAWYLHLLLRASECQWTVK*SWHNMG
Trigger: CCCCATGTTATGCCAACTCCACTTCACTGTCCACTG...GCACTCTGAGGCCCTCAGCAGCAGATGCAAGTACCATGCTTCTTGTACAGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CCA 90 bp CAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGGTGTCCTGATGTGCAGTGGACAGTGAAGTaGAGTTGGCATAACATGGGG +
Preference number: 4 (lower is better)
Translates to: QFVAYGESKTMEERCPDVQWTVK*SWHNMG
Trigger: CCCCATGTTATGCCAACTCCACTTCACTGTCCACTG...CACATCAGGACACCTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CCA 90 bp TGGCCAATTGTTACCTTGAACCTTCTAAGTAGTGGTGACCCATGGAGTGTAGGAGAGCCGTGCTCCTTCTaGTGCGCTGAGATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: WPIVTLNLLSSGDPWSVGEPCSF*CAEISR
Trigger: CCTGGAGATCTCAGCGCACCAGAAGGAGCACGGCTC...TCCTACACTCCATGGGTCACCACTACTTAGAAGGTTCAAGGTAACAATTGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565076.1
CDS-3UTR CCA 90 bp GAGCAGAGACTTGAAGGAGGGAGAGCGGGAGCCATGCAGCTGTGTTGGGGAAGAGCAAACTGCCACAAATaGGAGAGGAGTGGTAATAAA +
Preference number: 4 (lower is better)
Translates to: EQRLEGGRAGAMQLCWGRANCHK*ERSGNK
Trigger: TTTATTACCACTCCTCTCCCATTTGTGGCAGTTTGC...TCTTCCCCAACACAGCTGCATGGCTCCCGCTCTCCCTCCTTCAAGTCTCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR GCA 90 bp AGAATCTGGACTGCAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGCTGTTGTATTCCTGGTaGTGGTCTCCTTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: RIWTAVCGLRRVQDDGGELLYSW*WSPSGM
Trigger: CATCCCAGAAGGAGACCAGCACCAGGAATACAACAG...CTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTGCAGTCCAGATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279477.11
CDS-3UTR GCA 90 bp TTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGGTGTCCTGATGTGTTTAGCCTCAGAGTGCTTCTaGTCACAGTGGACAGTGAAG +
Preference number: 4 (lower is better)
Translates to: LWLTESPRRWRRGVLMCLASECF*SQWTVK
Trigger: CTTCACTGTCCACTGTGAGCAGAAGCACTCTGAGGC...TAAACACATCAGGACACCTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CCA 90 bp AGAGACACTGCTTTGGGGCATCATGGTCTTGTGAAGGTGGAACAGGAGCGTGTGCTCAATGTTGGGCTGTaGCAGCATTTCTACCACAAG +
Preference number: 4 (lower is better)
Translates to: RDTALGHHGLVKVEQERVLNVGL*QHFYHK
Trigger: CTTGTGGTAGAAATGCTGCCACAGCCCAACATTGAG...CACACGCTCCTGTTCCACCTTCACAAGACCATGATGCCCCAAAGCAGTGTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR CCA 90 bp GAGCAGAGACTTGAAGGAGGGAGAGCGGGAGCCATGCAGCTGTGTTGGGGAAGATGGTTGTTTAACTGTTaGCAGTGTGAAATTGGTCAG +
Preference number: 4 (lower is better)
Translates to: EQRLEGGRAGAMQLCWGRWLFNC*QCEIGQ
Trigger: CTGACCAATTTCACACTGCCAACAGTTAAACAACCA...TCTTCCCCAACACAGCTGCATGGCTCCCGCTCTCCCTCCTTCAAGTCTCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR CCA 90 bp CTGAATATGAGTTGTAAAGGGCAGTCATCGAGGGCTCCTCAATGTTGGGCTGTGGCCATGCAGCTGTGTTaGGGAAGAAGCAGAGAAGTG +
Preference number: 4 (lower is better)
Translates to: LNMSCKGQSSRAPQCWAVAMQLC*GRSREV
Trigger: CACTTCTCTGCTTCTTCCCCAACACAGCTGCATGGC...CACAGCCCAACATTGAGGAGCCCTCGATGACTGCCCTTTACAACTCATATTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR CCA 90 bp CTCTTGAGAATCTGGACTGCAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGAGAGTCCAAGACGATaGAGGAGAGGTGTCCTGATG +
Preference number: 4 (lower is better)
Translates to: LLRIWTAVCGLRRVQDDGESPRR*RRGVLM
Trigger: CATCAGGACACCTCTCCTCCATCGTCTTGGACTCTC...TCCATCGTCTTGGACTCTCCGTAAGCCACAAACTGCAGTCCAGATTCTCAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000568365.1
ENST00000569387.5
CDS-3UTR CCA 90 bp GACTGTACAAGAAGCATGGTACTTGCATCTGCTGCTGAGGGCCTCAGAGTGCTTCTGGACTGCAGTTTGTaGCTTACGGAGAGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: DCTRSMVLASAAEGLRVLLDCSL*LTESPR
Trigger: TCTTGGACTCTCCGTAAGCCACAAACTGCAGTCCAG...AAGCACTCTGAGGCCCTCAGCAGCAGATGCAAGTACCATGCTTCTTGTACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CCA 90 bp AGAGACACTGCTTTGGGGCATCATGGTCTTGTGAAGGTGGAACAGGAGCGTGTGAGAAATGATGCTTGCTaGCTAGGCATGGTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: RDTALGHHGLVKVEQERVRNDAC*LGMVAH
Trigger: ATGAGCCACCATGCCTAGCCAGCAAGCATCATTTCT...CACACGCTCCTGTTCCACCTTCACAAGACCATGATGCCCCAAAGCAGTGTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR TCA 90 bp CTGAATATGAGTTGTAAAGGGCAGTCATCGAGGGCTCCTCAATGTTGGGCTGTGACTGTGGCTGAAAAATaGAAGCCAGAGGAGTGGTCC +
Preference number: 4 (lower is better)
Translates to: LNMSCKGQSSRAPQCWAVTVAEK*KPEEWS
Trigger: GGACCACTCCTCTGGCTTTCATTTTTCAGCCACAGT...CACAGCCCAACATTGAGGAGCCCTCGATGACTGCCCTTTACAACTCATATTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR TCA 90 bp TTTGCTGAAAGTGTTCCAGCTTTGGCCTTTGGGAGCTCTTTCAGTTGGTTCCTGTTCATGGGTGATATCTaGGCCGTGCTCCTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: FAESVPALAFGSSFSWFLFMGDI*AVLLLV
Trigger: CACCAGAAGGAGCACGGCTCAGATATCACCCATGAA...CAGGAACCAACTGAAAGAGCTCCCAAAGGCCAAAGCTGGAACACTTTCAGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR GCA 90 bp TGGCCAATTGTTACCTTGAACCTTCTAAGTAGTGGTGACCCATGGAGTGTAGGAGTGATATCTGAGCCGTaGTCCTTCTGGTGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: WPIVTLNLLSSGDPWSVGVISEP*SFWCAE
Trigger: CTCAGCGCACCAGAAGGAGCACGGCTCAGATATCAC...TCCTACACTCCATGGGTCACCACTACTTAGAAGGTTCAAGGTAACAATTGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565076.1
CDS-3UTR CCA 90 bp ACCGTGAATAGAGACACTGCTTTGGGGCATCATGGTCTTGTGAAGGTGGAACAGAGGGCTCCTCAATGTTaGGCTGTGGCAGCATTTCTA +
Preference number: 4 (lower is better)
Translates to: TVNRDTALGHHGLVKVEQRAPQC*AVAAFL
Trigger: TAGAAATGCTGCCACAGCCCAACATTGAGGAGCCCT...CTGTTCCACCTTCACAAGACCATGATGCCCCAAAGCAGTGTCTCTATTCACGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR CCA 90 bp TTTGCTGAAAGTGTTCCAGCTTTGGCCTTTGGGAGCTCTTTCAGTTGGTTCCTGGCCATGCAGCTGTGTTaGGGAAGAAGCAGAGAAGTG +
Preference number: 4 (lower is better)
Translates to: FAESVPALAFGSSFSWFLAMQLC*GRSREV
Trigger: CACTTCTCTGCTTCTTCCCCAACACAGCTGCATGGC...CAGGAACCAACTGAAAGAGCTCCCAAAGGCCAAAGCTGGAACACTTTCAGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR CCA 90 bp TTGAGAATCTGGACTGCAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAAAGCTATGAGAAGTaGAGCAGCAGAAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: LRIWTAVCGLRRVQDDGGESYEK*SSRSQC
Trigger: GCACTGGCTTCTGCTGCTCCACTTCTCATAGCTTTC...TCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTGCAGTCCAGATTCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000568365.1
ENST00000569387.5
CDS-3UTR CCA 90 bp CTCTTGAGAATCTGGACTGCAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGACTGGACTGCAGTTTGTaGCTTACGGAGAGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: LLRIWTAVCGLRRVQDDGLDCSL*LTESPR
Trigger: TCTTGGACTCTCCGTAAGCCACAAACTGCAGTCCAG...TCCATCGTCTTGGACTCTCCGTAAGCCACAAACTGCAGTCCAGATTCTCAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000568365.1
ENST00000569387.5
3UTR CAA 72 bp CCTTTGGGAGCTCTTTCAGTTGGTTCCTGCGCCTCTTaGATGTACTCCAGTCACTGTGGGTTTTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: PLGALSVGSCAS*MYSSHCGFWFW
Trigger: CCAAAACCAAAACCCACAGTGACTGGAGTACATCAAAGAGGCGCAGGAACCAACTGAAAGAGCTCCCAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR TCA 90 bp GATTCAGTCACCTCCTACCAGGCCCATCCCACAACACATGCAGATTACAATTTAACGGACTTTTCAGGCTaGATCACCTGTAGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: DSVTSYQAHPTTHADYNLTDFSG*ITCSSS
Trigger: GGACGAGCTACAGGTGATTCAGCCTGAAAAGTCCGT...TAAATTGTAATCTGCATGTGTTGTGGGATGGGCCTGGTAGGAGGTGACTGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR TCA 90 bp CCAATTGTTACCTTGAACCTTCTAAGTAGTGGTGACCCATGGAGTGTAGGATTTCTCCTTCTGGTGCGCTaGGATCTCCAGGGCATAGCT +
Preference number: 4 (lower is better)
Translates to: PIVTLNLLSSGDPWSVGFLLLVR*DLQGIA
Trigger: AGCTATGCCCTGGAGATCTCAGCGCACCAGAAGGAG...AAATCCTACACTCCATGGGTCACCACTACTTAGAAGGTTCAAGGTAACAATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565076.1
CDS-3UTR TCA 90 bp TTCAGGAATCTTGCAATCTGGTTGTTTAACTGTTGGCAGTGTGAAATTGGTCAGGGCAGGAGAATCACTTaGACCCTGGAGGCGGGGGTT +
Preference number: 4 (lower is better)
Translates to: FRNLAIWLFNCWQCEIGQGRRIT*TLEAGV
Trigger: AACCCCCGCCTCCAGGGTTCAAGTGATTCTCCTGCC...CTGACCAATTTCACACTGCCAACAGTTAAACAACCAGATTGCAAGATTCCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR CCA 90 bp ACCGTGAATAGAGACACTGCTTTGGGGCATCATGGTCTTGTGAAGGTGGAACAGTGCTTTGGGGCATCATaGTCTTGTGAAGGTGGAACA +
Preference number: 4 (lower is better)
Translates to: TVNRDTALGHHGLVKVEQCFGAS*SCEGGT
Trigger: TGTTCCACCTTCACAAGACCATGATGCCCCAAAGCA...CTGTTCCACCTTCACAAGACCATGATGCCCCAAAGCAGTGTCTCTATTCACGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
ENST00000569629.1
CDS-3UTR CCA 90 bp GATTCAGTCACCTCCTACCAGGCCCATCCCACAACACATGCAGATTACAATTTAGCAGCAGGCTTGGACTaGGCCCTGAAAACCAATTGT +
Preference number: 4 (lower is better)
Translates to: DSVTSYQAHPTTHADYNLAAGLD*ALKTNC
Trigger: ACAATTGGTTTTCAGGGCCCAGTCCAAGCCTGCTGC...TAAATTGTAATCTGCATGTGTTGTGGGATGGGCCTGGTAGGAGGTGACTGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR CCA 90 bp GACTGTACAAGAAGCATGGTACTTGCATCTGCTGCTGAGGGCCTCAGAGTGCTTACTGTACAAGAAGCATaGTACTTGCATCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: DCTRSMVLASAAEGLRVLTVQEA*YLHLLL
Trigger: CAGCAGCAGATGCAAGTACCATGCTTCTTGTACAGT...AAGCACTCTGAGGCCCTCAGCAGCAGATGCAAGTACCATGCTTCTTGTACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000279477.11
ENST00000562014.5
ENST00000565087.5
ENST00000565230.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CCA 90 bp CTGGACTGCAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGGTGTCGGTTTATTTGGCTTTTaGTTCTGCAGACTGTACAAG +
Preference number: 4 (lower is better)
Translates to: LDCSLWLTESPRRWRRGVGLFGF*FCRLYK
Trigger: CTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACC...GACACCTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTGCAGTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
3UTR CAA 72 bp GACTGCTTTCCTGGGTTTCAGGTTGCACAGTCATTTTaGCAATCTTGCACTGCCATGAAAAGTGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: DCFPGFQVAQSF*QSCTAMKSEGC
Trigger: GCAGCCCTCACTTTTCATGGCAGTGCAAGATTGCAAAAATGACTGTGCAACCTGAAACCCAGGAAAGCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR TCA 90 bp CTGAATATGAGTTGTAAAGGGCAGTCATCGAGGGCTCCTCAATGTTGGGCTGTGCTTTCTTTTTGGGTTTaGGGGATAGGATGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: LNMSCKGQSSRAPQCWAVLSFWV*GIGCLD
Trigger: GTCCAAGCATCCTATCCCTCAAACCCAAAAAGAAAG...CACAGCCCAACATTGAGGAGCCCTCGATGACTGCCCTTTACAACTCATATTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR TCA 90 bp ACCGTGAATAGAGACACTGCTTTGGGGCATCATGGTCTTGTGAAGGTGGAACAGCTTTCTTTTTGGGTTTaGGGGATAGGATGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: TVNRDTALGHHGLVKVEQLSFWV*GIGCLD
Trigger: GTCCAAGCATCCTATCCCTCAAACCCAAAAAGAAAG...CTGTTCCACCTTCACAAGACCATGATGCCCCAAAGCAGTGTCTCTATTCACGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR TCA 90 bp GGACTGCAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGGTGTCCTCTCCAACATAGGGGATaGAATTTCACATTGAGATTT +
Preference number: 4 (lower is better)
Translates to: GLQFVAYGESKTMEERCPLQHRG*NFTLRF
Trigger: AAATCTCAATGTGAAATTTCATCCCCTATGTTGGAG...AGGACACCTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTGCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR TCA 90 bp GAGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCAACTTGCATCTGCTGCTaGGGGCCTCAGAGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: EVYLAFGSADCTRSMVLATCICC*GPQSAS
Trigger: AGAAGCACTCTGAGGCCCTCAGCAGCAGATGCAAGT...TGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR TCA 90 bp AAAATATCTATCAAGTTGTGCATCAGACTTGACGCACAGTTTCTCCTGGTAGATGCTCCACCTGACAGGTaGGCACCACATCGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: KISIKLCIRLDAQFLLVDAPPDR*APHRPC
Trigger: ACAGGGACGATGTGGTGCTCACCTGTCAGGTGGAGC...ATCTACCAGGAGAAACTGTGCGTCAAGTCTGATGCACAACTTGATAGATATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565076.1
CDS-3UTR TCA 90 bp ATGTCGTTTTTCTCTTCCAGCATCCCATCCAGGATACCTGTTACATTTACTTGTCTCCTTCTGGTGCGCTaGGATCTCCAGGGCATAGCT +
Preference number: 4 (lower is better)
Translates to: MSFFSSSIPSRIPVTFTCLLLVR*DLQGIA
Trigger: AGCTATGCCCTGGAGATCTCAGCGCACCAGAAGGAG...ACAAGTAAATGTAACAGGTATCCTGGATGGGATGCTGGAAGAGAAAAACGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR TCA 90 bp ATGTCGTTTTTCTCTTCCAGCATCCCATCCAGGATACCTGTTACATTTACTTGTGCGCTGCTTCATGGGTaGTATCTGAGCCGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: MSFFSSSIPSRIPVTFTCALLHG*YLSRAP
Trigger: AGGAGCACGGCTCAGATATCACCCATGAAGCAGCGC...ACAAGTAAATGTAACAGGTATCCTGGATGGGATGCTGGAAGAGAAAAACGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR TCA 90 bp CTGAATATGAGTTGTAAAGGGCAGTCATCGAGGGCTCCTCAATGTTGGGCTGTGCCCCCACGATATAACTaGCATTCCATTTGCGTAACA +
Preference number: 4 (lower is better)
Translates to: LNMSCKGQSSRAPQCWAVPPRYN*HSICVT
Trigger: TGTTACGCAAATGGAATGTCAGTTATATCGTGGGGG...CACAGCCCAACATTGAGGAGCCCTCGATGACTGCCCTTTACAACTCATATTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR TCA 90 bp CCAATTGTTACCTTGAACCTTCTAAGTAGTGGTGACCCATGGAGTGTAGGATTTACCATGGGTGATATCTaGGCCGTGCTCCTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: PIVTLNLLSSGDPWSVGFTMGDI*AVLLLV
Trigger: CACCAGAAGGAGCACGGCTCAGATATCACCCATGGT...AAATCCTACACTCCATGGGTCACCACTACTTAGAAGGTTCAAGGTAACAATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565076.1
CDS-3UTR GCA 90 bp TTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCATCTGCAGCAGCAGAAGCCAGTaGTGGGCCAGGAGCAGTATT +
Preference number: 4 (lower is better)
Translates to: LFGFWFCRLYKKHGTCICSSRSQ*WARSSI
Trigger: AATACTGCTCCTGGCCCAGCACTGGCTTCTGCTGCT...GCAGATGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279477.11
ENST00000562014.5
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR GCA 90 bp TATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCATCTGCTAGCAGCAGAAGCCAGTaGTGGGCCAGGAGCAGTATT +
Preference number: 4 (lower is better)
Translates to: YLAFGSADCTRSMVLASASSRSQ*WARSSI
Trigger: AATACTGCTCCTGGCCCAGCACTGGCTTCTGCTGCT...AGCAGATGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279477.11
ENST00000562014.5
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR GCA 90 bp TCACAGTGGACAGTGAAGTGGAGTTGGCATAACATGGGGAGAGAGGAAGAGAAACTTGAGAATCTGGACTaGAGTTTGTGGCTTACGGAG +
Preference number: 4 (lower is better)
Translates to: SQWTVKWSWHNMGREEEKLENLD*SLWLTE
Trigger: CTCCGTAAGCCACAAACTGCAGTCCAGATTCTCAAG...TTTCTCTTCCTCTCTCCCCATGTTATGCCAACTCCACTTCACTGTCCACTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR GCA 90 bp ATCTGGACTGCAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGGTGTTTGGCTTTTGGTTCTaGAGACTGTACAAGAAGCAT +
Preference number: 4 (lower is better)
Translates to: IWTAVCGLRRVQDDGGEVFGFWF*RLYKKH
Trigger: ATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAA...CACCTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTGCAGTCCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR GCA 90 bp AGAATGATCATTGTTTTTCTGATTGACTATGGAGACTGCTTTCCTGGGTTTCAGCCGTGCTCCTTCTGGTaGGCTGAGATCTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: RMIIVFLIDYGDCFPGFQPCSFW*AEISRA
Trigger: TGCCCTGGAGATCTCAGCGCACCAGAAGGAGCACGG...CTGAAACCCAGGAAAGCAGTCTCCATAGTCAATCAGAAAAACAATGATCATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR CCA 90 bp ACTGCCACAAATGGGAGAGGAGTGGTAATAAAAGGGCTGAAGATGTCCCAAAGGTGCTTTGGGGCATCATaGTCTTGTGAAGGTGGAACA +
Preference number: 4 (lower is better)
Translates to: TATNGRGVVIKGLKMSQRCFGAS*SCEGGT
Trigger: TGTTCCACCTTCACAAGACCATGATGCCCCAAAGCA...CCTTTGGGACATCTTCAGCCCTTTTATTACCACTCCTCTCCCATTTGTGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR CCA 90 bp AGAGACACTGCTTTGGGGCATCATGGTCTTGTGAAGGTGGAACAGGAGCGTGTGTGGTTGTTTAACTGTTaGCAGTGTGAAATTGGTCAG +
Preference number: 4 (lower is better)
Translates to: RDTALGHHGLVKVEQERVWLFNC*QCEIGQ
Trigger: CTGACCAATTTCACACTGCCAACAGTTAAACAACCA...CACACGCTCCTGTTCCACCTTCACAAGACCATGATGCCCCAAAGCAGTGTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR CCA 90 bp AGGGATTTAACTCTGAGGTTTCCAGCAGCAGGCTTGGACTGGGCCCTGAAAACCAGGAATCTTGCAATCTaGTTGTTTAACTGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: RDLTLRFPAAGLDWALKTRNLAI*LFNCWQ
Trigger: CTGCCAACAGTTAAACAACCAGATTGCAAGATTCCT...GGTTTTCAGGGCCCAGTCCAAGCCTGCTGCTGGAAACCTCAGAGTTAAATCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR CCA 90 bp TTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGGTGTCCTGATGTGTTTAGGAGTTGGCATAACATaGGGAGAGAGGAAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: LWLTESPRRWRRGVLMCLGVGIT*GERKRK
Trigger: TTTTCTCTTCCTCTCTCCCCATGTTATGCCAACTCC...TAAACACATCAGGACACCTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CCA 90 bp TGCAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGGTGTCCTGATGGGTTTATTTGGCTTTTaGTTCTGCAGACTGTACAAG +
Preference number: 4 (lower is better)
Translates to: CSLWLTESPRRWRRGVLMGLFGF*FCRLYK
Trigger: CTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACC...CATCAGGACACCTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CCA 90 bp GGACTGCAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGGTGTCCTAAAGAGAGGTTTATTTaGCTTTTGGTTCTGCAGACT +
Preference number: 4 (lower is better)
Translates to: GLQFVAYGESKTMEERCPKERFI*LLVLQT
Trigger: AGTCTGCAGAACCAAAAGCCAAATAAACCTCTCTTT...AGGACACCTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTGCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CCA 90 bp CTGAATATGAGTTGTAAAGGGCAGTCATCGAGGGCTCCTCAATGTTGGGCTGTGGGGACTCTTCTGCACTaGAGATTCTTCTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LNMSCKGQSSRAPQCWAVGTLLH*RFFSSF
Trigger: GAAAGAAGAGAAGAATCTCCAGTGCAGAAGAGTCCC...CACAGCCCAACATTGAGGAGCCCTCGATGACTGCCCTTTACAACTCATATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR TCA 90 bp TATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCATCTGCTATGAATCCATCCCCATaGCCCAAACACCTCCCACCT +
Preference number: 4 (lower is better)
Translates to: YLAFGSADCTRSMVLASAMNPSP*PKHLPP
Trigger: AGGTGGGAGGTGTTTGGGTCATGGGGATGGATTCAT...AGCAGATGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR TCA 90 bp TTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCATCTGACTTGCATCTGCTGCTaGGGGCCTCAGAGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: FIWLLVLQTVQEAWYLHLTCICC*GPQSAS
Trigger: AGAAGCACTCTGAGGCCCTCAGCAGCAGATGCAAGT...CAGATGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR TCA 90 bp ATGTCGTTTTTCTCTTCCAGCATCCCATCCAGGATACCTGTTACATTTACTTGTGACAGGTGGATCACCTaGGGTCGGGAGTTCAAGACT +
Preference number: 4 (lower is better)
Translates to: MSFFSSSIPSRIPVTFTCDRWIT*GREFKT
Trigger: AGTCTTGAACTCCCGACCTCAGGTGATCCACCTGTC...ACAAGTAAATGTAACAGGTATCCTGGATGGGATGCTGGAAGAGAAAAACGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR GCA 90 bp AAGAGAGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTAGCAGCAGAAGCCAGTaGTGGGCCAGGAGCAGTATT +
Preference number: 4 (lower is better)
Translates to: KRGLFGFWFCRLYKKHGTSSRSQ*WARSSI
Trigger: AATACTGCTCCTGGCCCAGCACTGGCTTCTGCTGCT...AGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279477.11
ENST00000562014.5
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR GCA 90 bp GCCTCAGAGTGCTTCTGCTCACAGTGGACAGTGAAGTGGAGTTGGCATAACATGTTTGGCTTTTGGTTCTaGAGACTGTACAAGAAGCAT +
Preference number: 4 (lower is better)
Translates to: ASECFCSQWTVKWSWHNMFGFWF*RLYKKH
Trigger: ATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAA...CATGTTATGCCAACTCCACTTCACTGTCCACTGTGAGCAGAAGCACTCTGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR GCA 90 bp GACTGTACAAGAAGCATGGTACTTGCATCTGCTGCTGAGGGCCTCAGAGTGCTTTTTGGCTTTTGGTTCTaGAGACTGTACAAGAAGCAT +
Preference number: 4 (lower is better)
Translates to: DCTRSMVLASAAEGLRVLFGFWF*RLYKKH
Trigger: ATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAA...AAGCACTCTGAGGCCCTCAGCAGCAGATGCAAGTACCATGCTTCTTGTACAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000279477.11
ENST00000562014.5
ENST00000565087.5
ENST00000565230.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR GCA 90 bp TTCAGGAATCTTGCAATCTGGTTGTTTAACTGTTGGCAGTGTGAAATTGGTCAGGTGATATCTGAGCCGTaGTCCTTCTGGTGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: FRNLAIWLFNCWQCEIGQVISEP*SFWCAE
Trigger: CTCAGCGCACCAGAAGGAGCACGGCTCAGATATCAC...CTGACCAATTTCACACTGCCAACAGTTAAACAACCAGATTGCAAGATTCCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR CCA 90 bp ACCGTGAATAGAGACACTGCTTTGGGGCATCATGGTCTTGTGAAGGTGGAACAGACCATCTCATGTAAGTaGACACATGCATTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: TVNRDTALGHHGLVKVEQTISCK*THAFWR
Trigger: CCTCCAAAATGCATGTGTCCACTTACATGAGATGGT...CTGTTCCACCTTCACAAGACCATGATGCCCCAAAGCAGTGTCTCTATTCACGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR CCA 90 bp TATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCATCTGCTGAGAGTCCAAGACGATaGAGGAGAGGTGTCCTGATG +
Preference number: 4 (lower is better)
Translates to: YLAFGSADCTRSMVLASAESPRR*RRGVLM
Trigger: CATCAGGACACCTCTCCTCCATCGTCTTGGACTCTC...AGCAGATGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CCA 90 bp ACTGCCACAAATGGGAGAGGAGTGGTAATAAAAGGGCTGAAGATGTCCCAAAGGTGGCAGACACAGTTCTaGCAACTGAGGATACAGATA +
Preference number: 4 (lower is better)
Translates to: TATNGRGVVIKGLKMSQRWQTQF*QLRIQI
Trigger: TATCTGTATCCTCAGTTGCCAGAACTGTGTCTGCCA...CCTTTGGGACATCTTCAGCCCTTTTATTACCACTCCTCTCCCATTTGTGGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR TCA 90 bp TTCAGGAATCTTGCAATCTGGTTGTTTAACTGTTGGCAGTGTGAAATTGGTCAGCTCCTTCTCTCAGGCTaGGCTTCTCAAGAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: FRNLAIWLFNCWQCEIGQLLLSG*ASQERR
Trigger: CCTCCTTTCTTGAGAAGCTCAGCCTGAGAGAAGGAG...CTGACCAATTTCACACTGCCAACAGTTAAACAACCAGATTGCAAGATTCCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR TCA 90 bp GTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCATCTCCAGGAGGAAAGCTATaGGAAGTGGAGCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: VYLAFGSADCTRSMVLASPGGKL*EVEQQK
Trigger: CTTCTGCTGCTCCACTTCTCATAGCTTTCCTCCTGG...AGATGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000279477.11
ENST00000562014.5
ENST00000565087.5
ENST00000565230.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR TCA 90 bp AAAGAGAGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACCCAGGAGGAAAGCTATaGGAAGTGGAGCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: KERFIWLLVLQTVQEAWYPGGKL*EVEQQK
Trigger: CTTCTGCTGCTCCACTTCTCATAGCTTTCCTCCTGG...GTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCTCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000279477.11
ENST00000562014.5
ENST00000565087.5
ENST00000565230.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR TCA 90 bp GACTGTACAAGAAGCATGGTACTTGCATCTGCTGCTGAGGGCCTCAGAGTGCTTCTCCAACATAGGGGATaGAATTTCACATTGAGATTT +
Preference number: 4 (lower is better)
Translates to: DCTRSMVLASAAEGLRVLLQHRG*NFTLRF
Trigger: AAATCTCAATGTGAAATTTCATCCCCTATGTTGGAG...AAGCACTCTGAGGCCCTCAGCAGCAGATGCAAGTACCATGCTTCTTGTACAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR TCA 90 bp GCCTCAGAGTGCTTCTGCTCACAGTGGACAGTGAAGTGGAGTTGGCATAACATGCTCCAACATAGGGGATaGAATTTCACATTGAGATTT +
Preference number: 4 (lower is better)
Translates to: ASECFCSQWTVKWSWHNMLQHRG*NFTLRF
Trigger: AAATCTCAATGTGAAATTTCATCCCCTATGTTGGAG...CATGTTATGCCAACTCCACTTCACTGTCCACTGTGAGCAGAAGCACTCTGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR TCA 90 bp AAAGAGAGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACATGAATCCATCCCCATaGCCCAAACACCTCCCACCT +
Preference number: 4 (lower is better)
Translates to: KERFIWLLVLQTVQEAWYMNPSP*PKHLPP
Trigger: AGGTGGGAGGTGTTTGGGTCATGGGGATGGATTCAT...GTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCTCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR TCA 90 bp ATGCTGCAAGTGAGGTTCAAATTGAATGTGAGTGGAATTCTAGAAGTACAAATAGCTCCACCTGACAGGTaGGCACCACATCGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: MLQVRFKLNVSGILEVQIAPPDR*APHRPC
Trigger: ACAGGGACGATGTGGTGCTCACCTGTCAGGTGGAGC...TATTTGTACTTCTAGAATTCCACTCACATTCAATTTGAACCTCACTTGCAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR TCA 90 bp AGAATGATCATTGTTTTTCTGATTGACTATGGAGACTGCTTTCCTGGGTTTCAGCACTGCCATGAAAAGTaGGGGCTGCCTGTATTCGGC +
Preference number: 4 (lower is better)
Translates to: RMIIVFLIDYGDCFPGFQHCHEK*GLPVFG
Trigger: GCCGAATACAGGCAGCCCTCACTTTTCATGGCAGTG...CTGAAACCCAGGAAAGCAGTCTCCATAGTCAATCAGAAAAACAATGATCATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR TCA 90 bp CCAATTGTTACCTTGAACCTTCTAAGTAGTGGTGACCCATGGAGTGTAGGATTTGTTGTGCATCAGACTTaGCGCACAGTTTCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: PIVTLNLLSSGDPWSVGFVVHQT*RTVSPG
Trigger: ACCAGGAGAAACTGTGCGTCAAGTCTGATGCACAAC...AAATCCTACACTCCATGGGTCACCACTACTTAGAAGGTTCAAGGTAACAATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565076.1
CDS-3UTR GCA 90 bp TATAAAGAGAGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGAGCAGCAGAAGCCAGTaGTGGGCCAGGAGCAGTATT +
Preference number: 4 (lower is better)
Translates to: YKERFIWLLVLQTVQEAWSSRSQ*WARSSI
Trigger: AATACTGCTCCTGGCCCAGCACTGGCTTCTGCTGCT...CCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCTCTCTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279477.11
ENST00000562014.5
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR GCA 90 bp AAAGAGAGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACGCCTCAGAGTGCTTCTaGTCACAGTGGACAGTGAAG +
Preference number: 4 (lower is better)
Translates to: KERFIWLLVLQTVQEAWYASECF*SQWTVK
Trigger: CTTCACTGTCCACTGTGAGCAGAAGCACTCTGAGGC...GTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCTCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CCA 90 bp TTCAGGAATCTTGCAATCTGGTTGTTTAACTGTTGGCAGTGTGAAATTGGTCAGGCAGCAGGCTTGGACTaGGCCCTGAAAACCAATTGT +
Preference number: 4 (lower is better)
Translates to: FRNLAIWLFNCWQCEIGQAAGLD*ALKTNC
Trigger: ACAATTGGTTTTCAGGGCCCAGTCCAAGCCTGCTGC...CTGACCAATTTCACACTGCCAACAGTTAAACAACCAGATTGCAAGATTCCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR CCA 90 bp AGAGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCGAAAGCTATGAGAAGTaGAGCAGCAGAAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: RGLFGFWFCRLYKKHGTCESYEK*SSRSQC
Trigger: GCACTGGCTTCTGCTGCTCCACTTCTCATAGCTTTC...GCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000279477.11
ENST00000562014.5
ENST00000565087.5
ENST00000565230.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CCA 90 bp GAGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCACAGTGGACAGTGAAGTaGAGTTGGCATAACATGGGG +
Preference number: 4 (lower is better)
Translates to: EVYLAFGSADCTRSMVLAQWTVK*SWHNMG
Trigger: CCCCATGTTATGCCAACTCCACTTCACTGTCCACTG...TGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CCA 90 bp GCCTCAGAGTGCTTCTGCTCACAGTGGACAGTGAAGTGGAGTTGGCATAACATGAAAGAGAGGTTTATTTaGCTTTTGGTTCTGCAGACT +
Preference number: 4 (lower is better)
Translates to: ASECFCSQWTVKWSWHNMKERFI*LLVLQT
Trigger: AGTCTGCAGAACCAAAAGCCAAATAAACCTCTCTTT...CATGTTATGCCAACTCCACTTCACTGTCCACTGTGAGCAGAAGCACTCTGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CCA 90 bp AAAATATCTATCAAGTTGTGCATCAGACTTGACGCACAGTTTCTCCTGGTAGATAACCTCCAAGGTGGGTaGAACTCGGATGGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: KISIKLCIRLDAQFLLVDNLQGG*NSDGLR
Trigger: TCTGAGGCCATCCGAGTTCCACCCACCTTGGAGGTT...ATCTACCAGGAGAAACTGTGCGTCAAGTCTGATGCACAACTTGATAGATATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565076.1
CDS-3UTR CCA 90 bp ATCCCATCCAGGATACCTGTTACATTTACTTGTCATATCTCCTCAAGCTTCTCTACCTTCTTCACATGGTaGCAGGAGGGAGAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: IPSRIPVTFTCHISSSFSTFFTW*QEGERE
Trigger: CTCTCTCTCTCCCTCCTGCCACCATGTGAAGAAGGT...AGAGAAGCTTGAGGAGATATGACAAGTAAATGTAACAGGTATCCTGGATGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR CCA 90 bp TTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCATCTGCAGCAGAAGCCAGTGCTaGGCCTTAATTAGTTTGGGC +
Preference number: 4 (lower is better)
Translates to: LFGFWFCRLYKKHGTCICSRSQC*ALISLG
Trigger: GCCCAAACTAATTAAGGCCCAGCACTGGCTTCTGCT...GCAGATGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565230.5
CDS-3UTR TCA 90 bp CTGAATATGAGTTGTAAAGGGCAGTCATCGAGGGCTCCTCAATGTTGGGCTGTGGAAGAAGCAGAGAAGTaGTATGATTTGACTTTTCCA +
Preference number: 4 (lower is better)
Translates to: LNMSCKGQSSRAPQCWAVEEAEK*YDLTFP
Trigger: TGGAAAAGTCAAATCATATCACTTCTCTGCTTCTTC...CACAGCCCAACATTGAGGAGCCCTCGATGACTGCCCTTTACAACTCATATTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR TCA 90 bp ATAAAGAGAGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTCCAGGAGGAAAGCTATaGGAAGTGGAGCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: IKRGLFGFWFCRLYKKHGPGGKL*EVEQQK
Trigger: CTTCTGCTGCTCCACTTCTCATAGCTTTCCTCCTGG...ACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCTCTCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000279477.11
ENST00000562014.5
ENST00000565087.5
ENST00000565230.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR TCA 90 bp ATAAAGAGAGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTATGAATCCATCCCCATaGCCCAAACACCTCCCACCT +
Preference number: 4 (lower is better)
Translates to: IKRGLFGFWFCRLYKKHGMNPSP*PKHLPP
Trigger: AGGTGGGAGGTGTTTGGGTCATGGGGATGGATTCAT...ACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCTCTCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR TCA 90 bp AAAATATCTATCAAGTTGTGCATCAGACTTGACGCACAGTTTCTCCTGGTAGATGGGCATAGCTTTTGCTaGCTGCTTGCTGCCCATCAT +
Preference number: 4 (lower is better)
Translates to: KISIKLCIRLDAQFLLVDGHSFC*LLAAHH
Trigger: ATGATGGGCAGCAAGCAGTCAGCAAAAGCTATGCCC...ATCTACCAGGAGAAACTGTGCGTCAAGTCTGATGCACAACTTGATAGATATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565076.1
CDS-3UTR GCA 90 bp CTGAATATGAGTTGTAAAGGGCAGTCATCGAGGGCTCCTCAATGTTGGGCTGTGGAAATTGGCAAGCACTaGAAAACAGCTTTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: LNMSCKGQSSRAPQCWAVEIGKH*KTAFGF
Trigger: AAAACCAAAAGCTGTTTTGCAGTGCTTGCCAATTTC...CACAGCCCAACATTGAGGAGCCCTCGATGACTGCCCTTTACAACTCATATTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR GCA 90 bp GAGAGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCTTGAGAATCTGGACTaGAGTTTGTGGCTTACGGAG +
Preference number: 4 (lower is better)
Translates to: ERFIWLLVLQTVQEAWYLLENLD*SLWLTE
Trigger: CTCCGTAAGCCACAAACTGCAGTCCAGATTCTCAAG...CAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR GCA 90 bp TATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCATCTGCTCTTGAGAATCTGGACTaGAGTTTGTGGCTTACGGAG +
Preference number: 4 (lower is better)
Translates to: YLAFGSADCTRSMVLASALENLD*SLWLTE
Trigger: CTCCGTAAGCCACAAACTGCAGTCCAGATTCTCAAG...AGCAGATGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR GCA 90 bp ATAAAGAGAGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTGCCTCAGAGTGCTTCTaGTCACAGTGGACAGTGAAG +
Preference number: 4 (lower is better)
Translates to: IKRGLFGFWFCRLYKKHGASECF*SQWTVK
Trigger: CTTCACTGTCCACTGTGAGCAGAAGCACTCTGAGGC...ACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCTCTCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR GCA 90 bp GATTCAGTCACCTCCTACCAGGCCCATCCCACAACACATGCAGATTACAATTTAATTGACTATGGAGACTaGTTTCCTGGGTTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: DSVTSYQAHPTTHADYNLIDYGD*FPGFQV
Trigger: AACCTGAAACCCAGGAAAGCAGTCTCCATAGTCAAT...TAAATTGTAATCTGCATGTGTTGTGGGATGGGCCTGGTAGGAGGTGACTGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR GCA 90 bp TTCAGGAATCTTGCAATCTGGTTGTTTAACTGTTGGCAGTGTGAAATTGGTCAGCCAAGATCACGACATTaGACTCCAGCCTGGGCAATA +
Preference number: 4 (lower is better)
Translates to: FRNLAIWLFNCWQCEIGQPRSRH*TPAWAI
Trigger: TATTGCCCAGGCTGGAGTGCAATGTCGTGATCTTGG...CTGACCAATTTCACACTGCCAACAGTTAAACAACCAGATTGCAAGATTCCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR GCA 90 bp CTGAATATGAGTTGTAAAGGGCAGTCATCGAGGGCTCCTCAATGTTGGGCTGTGACTTTGGTGATGACATaGATGCATTTCTCTTACCAT +
Preference number: 4 (lower is better)
Translates to: LNMSCKGQSSRAPQCWAVTLVMT*MHFSYH
Trigger: ATGGTAAGAGAAATGCATGCATGTCATCACCAAAGT...CACAGCCCAACATTGAGGAGCCCTCGATGACTGCCCTTTACAACTCATATTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR GCA 90 bp TATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCATCTGCTAGCAGCAGAAGCCAGTaGTGGGCCTTAATTAGTTTG +
Preference number: 4 (lower is better)
Translates to: YLAFGSADCTRSMVLASASSRSQ*WALISL
Trigger: CAAACTAATTAAGGCCCAGCACTGGCTTCTGCTGCT...AGCAGATGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565230.5
CDS-3UTR CCA 90 bp TATAAAGAGAGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGAACCTCCAAGGTGGGTaGAACTCGGATGGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: YKERFIWLLVLQTVQEAWNLQGG*NSDGLR
Trigger: TCTGAGACCATCCGAGTTCCACCCACCTTGGAGGTT...CCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCTCTCTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279477.11
ENST00000562014.5
CDS-3UTR CCA 90 bp GTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCATCTTTGTATTCCTGGTGCTaGTCTCCTTCTGGGATGCAG +
Preference number: 4 (lower is better)
Translates to: VYLAFGSADCTRSMVLASLYSWC*SPSGMQ
Trigger: CTGCATCCCAGAAGGAGACCAGCACCAGGAATACAA...AGATGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279477.11
CDS-3UTR CCA 90 bp TTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCATCTGCTGGACTGCAGTTTGTaGCTTACGGAGAGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: FIWLLVLQTVQEAWYLHLLDCSL*LTESPR
Trigger: TCTTGGACTCTCCGTAAGCCACAAACTGCAGTCCAG...CAGATGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CCA 90 bp ATGTCGTTTTTCTCTTCCAGCATCCCATCCAGGATACCTGTTACATTTACTTGTTGGAGACTGCTTTCCTaGGTTTCAGGTTGCACAGTC +
Preference number: 4 (lower is better)
Translates to: MSFFSSSIPSRIPVTFTCWRLLS*VSGCTV
Trigger: GACTGTGCAACCTGAAACCCAGGAAAGCAGTCTCCA...ACAAGTAAATGTAACAGGTATCCTGGATGGGATGCTGGAAGAGAAAAACGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR CCA 90 bp AAAATATCTATCAAGTTGTGCATCAGACTTGACGCACAGTTTCTCCTGGTAGATGAAGTAACCGCACCATaGGTGATATCTGAGCCGTGC +
Preference number: 4 (lower is better)
Translates to: KISIKLCIRLDAQFLLVDEVTAP*VISEPC
Trigger: GCACGGCTCAGATATCACCCATGGTGCGGTTACTTC...ATCTACCAGGAGAAACTGTGCGTCAAGTCTGATGCACAACTTGATAGATATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565076.1
CDS-3UTR CCA 90 bp CCAATTGTTACCTTGAACCTTCTAAGTAGTGGTGACCCATGGAGTGTAGGATTTGTTTCTCCTGGTAGATaGGGCTTAAGGGTGTCTACA +
Preference number: 4 (lower is better)
Translates to: PIVTLNLLSSGDPWSVGFVSPGR*GLRVST
Trigger: TGTAGACACCCTTAAGCCCCATCTACCAGGAGAAAC...AAATCCTACACTCCATGGGTCACCACTACTTAGAAGGTTCAAGGTAACAATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565076.1
CDS-3UTR TCA 90 bp ACTGCCACAAATGGGAGAGGAGTGGTAATAAAAGGGCTGAAGATGTCCCAAAGGGAAGAAGCAGAGAAGTaGTATGATTTGACTTTTCCA +
Preference number: 4 (lower is better)
Translates to: TATNGRGVVIKGLKMSQREEAEK*YDLTFP
Trigger: TGGAAAAGTCAAATCATATCACTTCTCTGCTTCTTC...CCTTTGGGACATCTTCAGCCCTTTTATTACCACTCCTCTCCCATTTGTGGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR TCA 90 bp AGAATGATCATTGTTTTTCTGATTGACTATGGAGACTGCTTTCCTGGGTTTCAGAATCTTGCACTGCCATaGAAAGTGAGGGCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: RMIIVFLIDYGDCFPGFQNLALP*KVRAAC
Trigger: ACAGGCAGCCCTCACTTTTCATGGCAGTGCAAGATT...CTGAAACCCAGGAAAGCAGTCTCCATAGTCAATCAGAAAAACAATGATCATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR GCA 90 bp GTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCATCTCTTGAGAATCTGGACTaGAGTTTGTGGCTTACGGAG +
Preference number: 4 (lower is better)
Translates to: VYLAFGSADCTRSMVLASLENLD*SLWLTE
Trigger: CTCCGTAAGCCACAAACTGCAGTCCAGATTCTCAAG...AGATGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR GCA 90 bp TGGCCAATTGTTACCTTGAACCTTCTAAGTAGTGGTGACCCATGGAGTGTAGGAATATCTATCAAGTTGTaGATCAGACTTGACGCACAG +
Preference number: 4 (lower is better)
Translates to: WPIVTLNLLSSGDPWSVGISIKL*IRLDAQ
Trigger: CTGTGCGTCAAGTCTGATGCACAACTTGATAGATAT...TCCTACACTCCATGGGTCACCACTACTTAGAAGGTTCAAGGTAACAATTGGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565076.1
CDS-3UTR CCA 90 bp TATAAAGAGAGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGGAAAGCTATGAGAAGTaGAGCAGCAGAAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: YKERFIWLLVLQTVQEAWESYEK*SSRSQC
Trigger: GCACTGGCTTCTGCTGCTCCACTTCTCATAGCTTTC...CCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCTCTCTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000279477.11
ENST00000562014.5
ENST00000565087.5
ENST00000565230.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CCA 90 bp GAGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCAGGAGTTGGCATAACATaGGGAGAGAGGAAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: EVYLAFGSADCTRSMVLAGVGIT*GERKRK
Trigger: TTTTCTCTTCCTCTCTCCCCATGTTATGCCAACTCC...TGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CCA 90 bp AGAGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCACTGTACAAGAAGCATaGTACTTGCATCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RGLFGFWFCRLYKKHGTCTVQEA*YLHLLL
Trigger: CAGCAGCAGATGCAAGTACCATGCTTCTTGTACAGT...GCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000279477.11
ENST00000562014.5
ENST00000565087.5
ENST00000565230.5
ENST00000566055.5
ENST00000569387.5
3UTR CAA 72 bp ATCAGTAACCAGTCATGTTGTGTCTTTCAAAGTCTGTaGGTGATTGGTCCCTATGGCTCTCCTACTCAAACA +
Preference number: 4 (lower is better)
Translates to: ISNQSCCVFQSL*VIGPYGSPTQT
Trigger: TGTTTGAGTAGGAGAGCCATAGGGACCAATCACCAACAGACTTTGAAAGACACAACATGACTGGTTACTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR TCA 90 bp ATGCTGCAAGTGAGGTTCAAATTGAATGTGAGTGGAATTCTAGAAGTACAAATACTCCTTCTCTCAGGCTaGGCTTCTCAAGAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: MLQVRFKLNVSGILEVQILLLSG*ASQERR
Trigger: CCTCCTTTCTTGAGAAGCTCAGCCTGAGAGAAGGAG...TATTTGTACTTCTAGAATTCCACTCACATTCAATTTGAACCTCACTTGCAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR CCA 90 bp GCTGCAAGTGAGGTTCAAATTGAATGTGAGTGGAATTCTAGAAGTACAAATAGTAGGGCTCCTCAATGTTaGGCTGTGGCAGCATTTCTA +
Preference number: 4 (lower is better)
Translates to: AASEVQIECEWNSRSTNSRAPQC*AVAAFL
Trigger: TAGAAATGCTGCCACAGCCCAACATTGAGGAGCCCT...ACTATTTGTACTTCTAGAATTCCACTCACATTCAATTTGAACCTCACTTGCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR CCA 90 bp AGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCATGGAGTTGGCATAACATaGGGAGAGAGGAAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: RFIWLLVLQTVQEAWYLHGVGIT*GERKRK
Trigger: TTTTCTCTTCCTCTCTCCCCATGTTATGCCAACTCC...ATGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CCA 90 bp TTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCATCTGGGAGTTGGCATAACATaGGGAGAGAGGAAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: FIWLLVLQTVQEAWYLHLGVGIT*GERKRK
Trigger: TTTTCTCTTCCTCTCTCCCCATGTTATGCCAACTCC...CAGATGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CCA 90 bp AAAGAGAGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACACTGTACAAGAAGCATaGTACTTGCATCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KERFIWLLVLQTVQEAWYTVQEA*YLHLLL
Trigger: CAGCAGCAGATGCAAGTACCATGCTTCTTGTACAGT...GTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCTCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000279477.11
ENST00000562014.5
ENST00000565087.5
ENST00000565230.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CCA 90 bp AGAGAGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTACTGTACAAGAAGCATaGTACTTGCATCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: REVYLAFGSADCTRSMVLTVQEA*YLHLLL
Trigger: CAGCAGCAGATGCAAGTACCATGCTTCTTGTACAGT...AAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000279477.11
ENST00000562014.5
ENST00000565087.5
ENST00000565230.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CCA 90 bp AGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCATACTGTACAAGAAGCATaGTACTTGCATCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RFIWLLVLQTVQEAWYLHTVQEA*YLHLLL
Trigger: CAGCAGCAGATGCAAGTACCATGCTTCTTGTACAGT...ATGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000279477.11
ENST00000562014.5
ENST00000565087.5
ENST00000565230.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR TCA 90 bp TTCAGGAATCTTGCAATCTGGTTGTTTAACTGTTGGCAGTGTGAAATTGGTCAGAAGAATCACTGTGGCTaGAAAATGAAAGCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: FRNLAIWLFNCWQCEIGQKNHCG*KMKARG
Trigger: TCCTCTGGCTTTCATTTTTCAGCCACAGTGATTCTT...CTGACCAATTTCACACTGCCAACAGTTAAACAACCAGATTGCAAGATTCCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR TCA 90 bp TTCAGGAATCTTGCAATCTGGTTGTTTAACTGTTGGCAGTGTGAAATTGGTCAGCTCATGAGAACTCACTaGGATCTTATGAGAACTCAC +
Preference number: 4 (lower is better)
Translates to: FRNLAIWLFNCWQCEIGQLMRTH*DLMRTH
Trigger: GTGAGTTCTCATAAGATCTCAGTGAGTTCTCATGAG...CTGACCAATTTCACACTGCCAACAGTTAAACAACCAGATTGCAAGATTCCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR TCA 90 bp ATCCCATCCAGGATACCTGTTACATTTACTTGTCATATCTCCTCAAGCTTCTCTCTGATGTTTTCCTCATaGTTAGATTGGGGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: IPSRIPVTFTCHISSSFSLMFSS*LDWGCE
Trigger: CTCACAACCCCAATCTAATCATGAGGAAAACATCAG...AGAGAAGCTTGAGGAGATATGACAAGTAAATGTAACAGGTATCCTGGATGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR GCA 90 bp GAGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCATTTGGCTTTTGGTTCTaGAGACTGTACAAGAAGCAT +
Preference number: 4 (lower is better)
Translates to: EVYLAFGSADCTRSMVLAFGFWF*RLYKKH
Trigger: ATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAA...TGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000279477.11
ENST00000562014.5
ENST00000565087.5
ENST00000565230.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR GCA 90 bp TATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCATCTGCTTTTGGCTTTTGGTTCTaGAGACTGTACAAGAAGCAT +
Preference number: 4 (lower is better)
Translates to: YLAFGSADCTRSMVLASAFGFWF*RLYKKH
Trigger: ATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAA...AGCAGATGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000279477.11
ENST00000562014.5
ENST00000565087.5
ENST00000565230.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CCA 90 bp ATCCCATCCAGGATACCTGTTACATTTACTTGTCATATCTCCTCAAGCTTCTCTACCATCTCATGTAAGTaGACACATGCATTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: IPSRIPVTFTCHISSSFSTISCK*THAFWR
Trigger: CCTCCAAAATGCATGTGTCCACTTACATGAGATGGT...AGAGAAGCTTGAGGAGATATGACAAGTAAATGTAACAGGTATCCTGGATGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR CCA 90 bp GAGAGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGTTAAGAAACATTTCCTaGGAGGCTGTTGTATTCCTG +
Preference number: 4 (lower is better)
Translates to: ERFIWLLVLQTVQEAWYLLRNIS*EAVVFL
Trigger: CAGGAATACAACAGCCTCCCAGGAAATGTTTCTTAA...CAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279477.11
CDS-3UTR CCA 90 bp AGAGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCGGTTTATTTGGCTTTTaGTTCTGCAGACTGTACAAG +
Preference number: 4 (lower is better)
Translates to: RGLFGFWFCRLYKKHGTCGLFGF*FCRLYK
Trigger: CTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACC...GCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000279477.11
ENST00000562014.5
ENST00000565087.5
ENST00000565230.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CCA 90 bp TTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCATCTGCGGTTTATTTGGCTTTTaGTTCTGCAGACTGTACAAG +
Preference number: 4 (lower is better)
Translates to: LFGFWFCRLYKKHGTCICGLFGF*FCRLYK
Trigger: CTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACC...GCAGATGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000279477.11
ENST00000562014.5
ENST00000565087.5
ENST00000565230.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CCA 90 bp ATGTCGTTTTTCTCTTCCAGCATCCCATCCAGGATACCTGTTACATTTACTTGTGGAAACTTACAACCATaGTGGAAGGAGAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: MSFFSSSIPSRIPVTFTCGNLQP*WKEKRK
Trigger: CTTCCTTTTCTCCTTCCACCATGGTTGTAAGTTTCC...ACAAGTAAATGTAACAGGTATCCTGGATGGGATGCTGGAAGAGAAAAACGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR TCA 90 bp ATCCCATCCAGGATACCTGTTACATTTACTTGTCATATCTCCTCAAGCTTCTCTAGTGCAGTGAAGAAATaGGAAGTGAAAATGCTGCAA +
Preference number: 4 (lower is better)
Translates to: IPSRIPVTFTCHISSSFSSAVKK*EVKMLQ
Trigger: TTGCAGCATTTTCACTTCTCATTTCTTCACTGCACT...AGAGAAGCTTGAGGAGATATGACAAGTAAATGTAACAGGTATCCTGGATGGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR TCA 90 bp AGAGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCTCTGGTCTAATGCCTTaGTCTAATTGTCTTCAACAA +
Preference number: 4 (lower is better)
Translates to: RGLFGFWFCRLYKKHGTCSGLMP*SNCLQQ
Trigger: TTGTTGAAGACAATTAGATCAAGGCATTAGACCAGA...GCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565230.5
CDS-3UTR CCA 90 bp GTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCATCTGGTTTATTTGGCTTTTaGTTCTGCAGACTGTACAAG +
Preference number: 4 (lower is better)
Translates to: VYLAFGSADCTRSMVLASGLFGF*FCRLYK
Trigger: CTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACC...AGATGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000279477.11
ENST00000562014.5
ENST00000565087.5
ENST00000565230.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CCA 90 bp TATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCATCTGCTAAAGAGAGGTTTATTTaGCTTTTGGTTCTGCAGACT +
Preference number: 4 (lower is better)
Translates to: YLAFGSADCTRSMVLASAKERFI*LLVLQT
Trigger: AGTCTGCAGAACCAAAAGCCAAATAAACCTCTCTTT...AGCAGATGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000279477.11
ENST00000562014.5
ENST00000565087.5
ENST00000565230.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CCA 90 bp GAGAGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGAAAGAGAGGTTTATTTaGCTTTTGGTTCTGCAGACT +
Preference number: 4 (lower is better)
Translates to: ERFIWLLVLQTVQEAWYLKERFI*LLVLQT
Trigger: AGTCTGCAGAACCAAAAGCCAAATAAACCTCTCTTT...CAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000279477.11
ENST00000562014.5
ENST00000565087.5
ENST00000565230.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR TCA 90 bp GCTGCAAGTGAGGTTCAAATTGAATGTGAGTGGAATTCTAGAAGTACAAATAGTAAGAATCACTGTGGCTaGAAAATGAAAGCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: AASEVQIECEWNSRSTNSKNHCG*KMKARG
Trigger: TCCTCTGGCTTTCATTTTTCAGCCACAGTGATTCTT...ACTATTTGTACTTCTAGAATTCCACTCACATTCAATTTGAACCTCACTTGCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR TCA 90 bp AGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCATCTCCAACATAGGGGATaGAATTTCACATTGAGATTT +
Preference number: 4 (lower is better)
Translates to: RFIWLLVLQTVQEAWYLHLQHRG*NFTLRF
Trigger: AAATCTCAATGTGAAATTTCATCCCCTATGTTGGAG...ATGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR TCA 90 bp AGAATGATCATTGTTTTTCTGATTGACTATGGAGACTGCTTTCCTGGGTTTCAGCATTGTTTTTCTGATTaGCTATGGAGACTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: RMIIVFLIDYGDCFPGFQHCFSD*LWRLLS
Trigger: GGAAAGCAGTCTCCATAGTCAATCAGAAAAACAATG...CTGAAACCCAGGAAAGCAGTCTCCATAGTCAATCAGAAAAACAATGATCATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR TCA 90 bp AGAAGTGAAAATGCTGCAAGTGAGGTTCAAATTGAATGTGAGTGGAATTCTAGAAGAAGTACAAATAGTTaGCTGTGGCAATGTAGACCC +
Preference number: 4 (lower is better)
Translates to: RSENAASEVQIECEWNSRRSTNS*LWQCRP
Trigger: GGGTCTACATTGCCACAGTCAACTATTTGTACTTCT...TCTAGAATTCCACTCACATTCAATTTGAACCTCACTTGCAGCATTTTCACTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR GCA 90 bp ATGTCGTTTTTCTCTTCCAGCATCCCATCCAGGATACCTGTTACATTTACTTGTAATGAAAAGAAACAATaGTTGCTCCGTGTATTAGCC +
Preference number: 4 (lower is better)
Translates to: MSFFSSSIPSRIPVTFTCNEKKQ*LLRVLA
Trigger: GGCTAATACACGGAGCAAGCATTGTTTCTTTTCATT...ACAAGTAAATGTAACAGGTATCCTGGATGGGATGCTGGAAGAGAAAAACGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR GCA 90 bp AGAATGATCATTGTTTTTCTGATTGACTATGGAGACTGCTTTCCTGGGTTTCAGCCCGATGTTGCAGAATaGCTCCTTATTGAAATTTGT +
Preference number: 4 (lower is better)
Translates to: RMIIVFLIDYGDCFPGFQPDVAE*LLIEIC
Trigger: ACAAATTTCAATAAGGAGGCATTCTGCAACATCGGG...CTGAAACCCAGGAAAGCAGTCTCCATAGTCAATCAGAAAAACAATGATCATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR CCA 90 bp TATAAAGAGAGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGGGTTTATTTGGCTTTTaGTTCTGCAGACTGTACAAG +
Preference number: 4 (lower is better)
Translates to: YKERFIWLLVLQTVQEAWGLFGF*FCRLYK
Trigger: CTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACC...CCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCTCTCTTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000279477.11
ENST00000562014.5
ENST00000565087.5
ENST00000565230.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CCA 90 bp AGAGAGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTAAAGAGAGGTTTATTTaGCTTTTGGTTCTGCAGACT +
Preference number: 4 (lower is better)
Translates to: REVYLAFGSADCTRSMVLKERFI*LLVLQT
Trigger: AGTCTGCAGAACCAAAAGCCAAATAAACCTCTCTTT...AAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000279477.11
ENST00000562014.5
ENST00000565087.5
ENST00000565230.5
ENST00000566055.5
ENST00000569387.5
3UTR CAA 72 bp TTGCAATCTGGTTGTTTAACTGTTGGCAGTGTGAAATaGGTCAGGTTGGGAGTTATTACACTAGAGAAATTG +
Preference number: 4 (lower is better)
Translates to: LQSGCLTVGSVK*VRLGVITLEKL
Trigger: CAATTTCTCTAGTGTAATAACTCCCAACCTGACCAATTTCACACTGCCAACAGTTAAACAACCAGATTGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR GCA 90 bp ATGCTGCAAGTGAGGTTCAAATTGAATGTGAGTGGAATTCTAGAAGTACAAATATATCTGGGACTCTTCTaGACTGGAGATTCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: MLQVRFKLNVSGILEVQIYLGLF*TGDSSL
Trigger: AAGAGAAGAATCTCCAGTGCAGAAGAGTCCCAGATA...TATTTGTACTTCTAGAATTCCACTCACATTCAATTTGAACCTCACTTGCAGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR CCA 90 bp TATAAAGAGAGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGAAAGAGAGGTTTATTTaGCTTTTGGTTCTGCAGACT +
Preference number: 4 (lower is better)
Translates to: YKERFIWLLVLQTVQEAWKERFI*LLVLQT
Trigger: AGTCTGCAGAACCAAAAGCCAAATAAACCTCTCTTT...CCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCTCTCTTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000279477.11
ENST00000562014.5
ENST00000565087.5
ENST00000565230.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR TCA 90 bp ATGCTGCAAGTGAGGTTCAAATTGAATGTGAGTGGAATTCTAGAAGTACAAATAATTTTGCAACCAAGATaGAAGTGCAGTGAAGAAATG +
Preference number: 4 (lower is better)
Translates to: MLQVRFKLNVSGILEVQIILQPR*KCSEEM
Trigger: CATTTCTTCACTGCACTTTCATCTTGGTTGCAAAAT...TATTTGTACTTCTAGAATTCCACTCACATTCAATTTGAACCTCACTTGCAGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR TCA 90 bp ATGCTGCAAGTGAGGTTCAAATTGAATGTGAGTGGAATTCTAGAAGTACAAATAAATAAAAGCTCGTCATaGTCAGTAACCAGTCATGTT +
Preference number: 4 (lower is better)
Translates to: MLQVRFKLNVSGILEVQINKSSS*SVTSHV
Trigger: AACATGACTGGTTACTGATCATGACGAGCTTTTATT...TATTTGTACTTCTAGAATTCCACTCACATTCAATTTGAACCTCACTTGCAGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR GCA 90 bp ATGCTGCAAGTGAGGTTCAAATTGAATGTGAGTGGAATTCTAGAAGTACAAATAGAAATTGGCAAGCACTaGAAAACAGCTTTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: MLQVRFKLNVSGILEVQIEIGKH*KTAFGF
Trigger: AAAACCAAAAGCTGTTTTGCAGTGCTTGCCAATTTC...TATTTGTACTTCTAGAATTCCACTCACATTCAATTTGAACCTCACTTGCAGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR CAA 90 bp CTGGACTGCAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGGTGTCACGGGGGCAGAGGGTTaGGCACGCACAGACAGCTCG +
Preference number: 5 (lower is better)
Translates to: LDCSLWLTESPRRWRRGVTGAEG*ARTDSS
Trigger: CGAGCTGTCTGTGCGTGCCAAACCCTCTGCCCCCGT...GACACCTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTGCAGTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000279477.11
ENST00000568365.1
CDS-3UTR CAA 90 bp GAAGGAGGGAGAGCGGGAGCCATGCAGCTGTGTTGGGGAAGAAGCAGAGAAGTGTTTCCAGCAGCAGGCTaGGACTGGGCCCTGAAAACC +
Preference number: 5 (lower is better)
Translates to: EGGRAGAMQLCWGRSREVFPAAG*DWALKT
Trigger: GGTTTTCAGGGCCCAGTCCAAGCCTGCTGCTGGAAA...CACTTCTCTGCTTCTTCCCCAACACAGCTGCATGGCTCCCGCTCTCCCTCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR CAA 90 bp GAGCAGAGACTTGAAGGAGGGAGAGCGGGAGCCATGCAGCTGTGTTGGGGAAGAGAGGGCTCCTCAATGTaGGGCTGTGGCAGCATTTCT +
Preference number: 5 (lower is better)
Translates to: EQRLEGGRAGAMQLCWGREGSSM*GCGSIS
Trigger: AGAAATGCTGCCACAGCCCAACATTGAGGAGCCCTC...TCTTCCCCAACACAGCTGCATGGCTCCCGCTCTCCCTCCTTCAAGTCTCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR CAA 90 bp GAAGGAGGGAGAGCGGGAGCCATGCAGCTGTGTTGGGGAAGAAGCAGAGAAGTGACATTGAGCAGAGACTaGAAGGAGGGAGAGCGGGAG +
Preference number: 5 (lower is better)
Translates to: EGGRAGAMQLCWGRSREVTLSRD*KEGERE
Trigger: CTCCCGCTCTCCCTCCTTCAAGTCTCTGCTCAATGT...CACTTCTCTGCTTCTTCCCCAACACAGCTGCATGGCTCCCGCTCTCCCTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR CAA 90 bp GAGCAGAGACTTGAAGGAGGGAGAGCGGGAGCCATGCAGCTGTGTTGGGGAAGAGCCAAGATCACGACATaGCACTCCAGCCTGGGCAAT +
Preference number: 5 (lower is better)
Translates to: EQRLEGGRAGAMQLCWGRAKITT*HSSLGN
Trigger: ATTGCCCAGGCTGGAGTGCAATGTCGTGATCTTGGC...TCTTCCCCAACACAGCTGCATGGCTCCCGCTCTCCCTCCTTCAAGTCTCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR CAA 90 bp GAAGGAGGGAGAGCGGGAGCCATGCAGCTGTGTTGGGGAAGAAGCAGAGAAGTGAATAGAGACACTGCTTaGGGGCATCATGGTCTTGTG +
Preference number: 5 (lower is better)
Translates to: EGGRAGAMQLCWGRSREVNRDTA*GHHGLV
Trigger: CACAAGACCATGATGCCCCAAAGCAGTGTCTCTATT...CACTTCTCTGCTTCTTCCCCAACACAGCTGCATGGCTCCCGCTCTCCCTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR CAA 90 bp CTGAATATGAGTTGTAAAGGGCAGTCATCGAGGGCTCCTCAATGTTGGGCTGTGTTTCCAGCAGCAGGCTaGGACTGGGCCCTGAAAACC +
Preference number: 5 (lower is better)
Translates to: LNMSCKGQSSRAPQCWAVFPAAG*DWALKT
Trigger: GGTTTTCAGGGCCCAGTCCAAGCCTGCTGCTGGAAA...CACAGCCCAACATTGAGGAGCCCTCGATGACTGCCCTTTACAACTCATATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR CAA 90 bp GGACTGCAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGGTGTCCTAATCTGGACTGCAGTTaGTGGCTTACGGAGAGTCCA +
Preference number: 5 (lower is better)
Translates to: GLQFVAYGESKTMEERCPNLDCS*WLTESP
Trigger: TGGACTCTCCGTAAGCCACAAACTGCAGTCCAGATT...AGGACACCTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTGCAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000568365.1
ENST00000569387.5
CDS-3UTR CAA 90 bp ACCGTGAATAGAGACACTGCTTTGGGGCATCATGGTCTTGTGAAGGTGGAACAGACATTGAGCAGAGACTaGAAGGAGGGAGAGCGGGAG +
Preference number: 5 (lower is better)
Translates to: TVNRDTALGHHGLVKVEQTLSRD*KEGERE
Trigger: CTCCCGCTCTCCCTCCTTCAAGTCTCTGCTCAATGT...CTGTTCCACCTTCACAAGACCATGATGCCCCAAAGCAGTGTCTCTATTCACGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR CAA 90 bp AAGAGAGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTACGGGGGCAGAGGGTTaGGCACGCACAGACAGCTCG +
Preference number: 5 (lower is better)
Translates to: KRGLFGFWFCRLYKKHGTTGAEG*ARTDSS
Trigger: CGAGCTGTCTGTGCGTGCCAAACCCTCTGCCCCCGT...AGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCTCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279477.11
CDS-3UTR CAA 90 bp GACTGTACAAGAAGCATGGTACTTGCATCTGCTGCTGAGGGCCTCAGAGTGCTTAATCTGGACTGCAGTTaGTGGCTTACGGAGAGTCCA +
Preference number: 5 (lower is better)
Translates to: DCTRSMVLASAAEGLRVLNLDCS*WLTESP
Trigger: TGGACTCTCCGTAAGCCACAAACTGCAGTCCAGATT...AAGCACTCTGAGGCCCTCAGCAGCAGATGCAAGTACCATGCTTCTTGTACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CAA 90 bp ATGTCGTTTTTCTCTTCCAGCATCCCATCCAGGATACCTGTTACATTTACTTGTACGGGGGCAGAGGGTTaGGCGCGCACAGACAGCTCA +
Preference number: 5 (lower is better)
Translates to: MSFFSSSIPSRIPVTFTCTGAEG*ARTDSS
Trigger: TGAGCTGTCTGTGCGCGCCAAACCCTCTGCCCCCGT...ACAAGTAAATGTAACAGGTATCCTGGATGGGATGCTGGAAGAGAAAAACGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR CAA 90 bp GAAGGAGGGAGAGCGGGAGCCATGCAGCTGTGTTGGGGAAGAAGCAGAGAAGTGTGGCTGAAGCTGTATTaGTCAGATTTTTCCACTGTA +
Preference number: 5 (lower is better)
Translates to: EGGRAGAMQLCWGRSREVWLKLY*SDFSTV
Trigger: TACAGTGGAAAAATCTGACAAATACAGCTTCAGCCA...CACTTCTCTGCTTCTTCCCCAACACAGCTGCATGGCTCCCGCTCTCCCTCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR CAA 90 bp GAAGGAGGGAGAGCGGGAGCCATGCAGCTGTGTTGGGGAAGAAGCAGAGAAGTGACTGCAAAACAGCTTTaGGTTTTTCCCTTTCAGAAA +
Preference number: 5 (lower is better)
Translates to: EGGRAGAMQLCWGRSREVTAKQL*VFPFQK
Trigger: TTTCTGAAAGGGAAAAACCAAAAGCTGTTTTGCAGT...CACTTCTCTGCTTCTTCCCCAACACAGCTGCATGGCTCCCGCTCTCCCTCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR CAA 90 bp GAGCAGAGACTTGAAGGAGGGAGAGCGGGAGCCATGCAGCTGTGTTGGGGAAGATTGATTTTGATGACCTaGACAGTTTTGAGGAGTTCT +
Preference number: 5 (lower is better)
Translates to: EQRLEGGRAGAMQLCWGRLILMT*TVLRSS
Trigger: AGAACTCCTCAAAACTGTCAAGGTCATCAAAATCAA...TCTTCCCCAACACAGCTGCATGGCTCCCGCTCTCCCTCCTTCAAGTCTCTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR CAA 90 bp ACCGTGAATAGAGACACTGCTTTGGGGCATCATGGTCTTGTGAAGGTGGAACAGAATAGAGACACTGCTTaGGGGCATCATGGTCTTGTG +
Preference number: 5 (lower is better)
Translates to: TVNRDTALGHHGLVKVEQNRDTA*GHHGLV
Trigger: CACAAGACCATGATGCCCCAAAGCAGTGTCTCTATT...CTGTTCCACCTTCACAAGACCATGATGCCCCAAAGCAGTGTCTCTATTCACGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
ENST00000569629.1
CDS-3UTR CAA 90 bp AGGGATTTAACTCTGAGGTTTCCAGCAGCAGGCTTGGACTGGGCCCTGAAAACCTTCCTGGGTTTCAGGTaGCACAGTCATTTTTGCAAT +
Preference number: 5 (lower is better)
Translates to: RDLTLRFPAAGLDWALKTFLGFR*HSHFCN
Trigger: ATTGCAAAAATGACTGTGCAACCTGAAACCCAGGAA...GGTTTTCAGGGCCCAGTCCAAGCCTGCTGCTGGAAACCTCAGAGTTAAATCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR CAA 90 bp TTCAGGAATCTTGCAATCTGGTTGTTTAACTGTTGGCAGTGTGAAATTGGTCAGTTTCCAGCAGCAGGCTaGGACTGGGCCCTGAAAACC +
Preference number: 5 (lower is better)
Translates to: FRNLAIWLFNCWQCEIGQFPAAG*DWALKT
Trigger: GGTTTTCAGGGCCCAGTCCAAGCCTGCTGCTGGAAA...CTGACCAATTTCACACTGCCAACAGTTAAACAACCAGATTGCAAGATTCCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR CAA 90 bp CAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGGTGTCCTGATGTGAGGTTTATTTGGCTTTaGGTTCTGCAGACTGTACAA +
Preference number: 5 (lower is better)
Translates to: QFVAYGESKTMEERCPDVRFIWL*VLQTVQ
Trigger: TTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCT...CACATCAGGACACCTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CAA 90 bp ATCTGGACTGCAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGGTGAGGTTTATTTGGCTTTaGGTTCTGCAGACTGTACAA +
Preference number: 5 (lower is better)
Translates to: IWTAVCGLRRVQDDGGEVRFIWL*VLQTVQ
Trigger: TTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCT...CACCTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTGCAGTCCAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CAA 90 bp GATTCAGTCACCTCCTACCAGGCCCATCCCACAACACATGCAGATTACAATTTAGAAAGTGTTCCAGCTTaGGCCTTTGGGAGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: DSVTSYQAHPTTHADYNLESVPA*AFGSSF
Trigger: GAAAGAGCTCCCAAAGGCCAAAGCTGGAACACTTTC...TAAATTGTAATCTGCATGTGTTGTGGGATGGGCCTGGTAGGAGGTGACTGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR CAA 90 bp AGAGACACTGCTTTGGGGCATCATGGTCTTGTGAAGGTGGAACAGGAGCGTGTGGGCCCTGAAAACCAATaGTTAAATTTCAGGAATCTT +
Preference number: 5 (lower is better)
Translates to: RDTALGHHGLVKVEQERVGPENQ*LNFRNL
Trigger: AAGATTCCTGAAATTTAACAATTGGTTTTCAGGGCC...CACACGCTCCTGTTCCACCTTCACAAGACCATGATGCCCCAAAGCAGTGTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR CAA 90 bp AGGGATTTAACTCTGAGGTTTCCAGCAGCAGGCTTGGACTGGGCCCTGAAAACCGGCCCTGAAAACCAATaGTTAAATTTCAGGAATCTT +
Preference number: 5 (lower is better)
Translates to: RDLTLRFPAAGLDWALKTGPENQ*LNFRNL
Trigger: AAGATTCCTGAAATTTAACAATTGGTTTTCAGGGCC...GGTTTTCAGGGCCCAGTCCAAGCCTGCTGCTGGAAACCTCAGAGTTAAATCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR CAA 90 bp CTGAATATGAGTTGTAAAGGGCAGTCATCGAGGGCTCCTCAATGTTGGGCTGTGAATCTTGCAATCTGGTaGTTTAACTGTTGGCAGTGT +
Preference number: 5 (lower is better)
Translates to: LNMSCKGQSSRAPQCWAVNLAIW*FNCWQC
Trigger: ACACTGCCAACAGTTAAACAACCAGATTGCAAGATT...CACAGCCCAACATTGAGGAGCCCTCGATGACTGCCCTTTACAACTCATATTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR CAA 90 bp AGAATCTGGACTGCAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGTTAAACAATCAGATCTaGTGGGTGCTAATAGACCAA +
Preference number: 5 (lower is better)
Translates to: RIWTAVCGLRRVQDDGGELNNQI*WVLIDQ
Trigger: TTGGTCTATTAGCACCCACAAGATCTGATTGTTTAA...CTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTGCAGTCCAGATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CAA 90 bp TTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGGTGTCCTGATGTGTTTAAGGTTTATTTGGCTTTaGGTTCTGCAGACTGTACAA +
Preference number: 5 (lower is better)
Translates to: LWLTESPRRWRRGVLMCLRFIWL*VLQTVQ
Trigger: TTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCT...TAAACACATCAGGACACCTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CAA 90 bp CTGAATATGAGTTGTAAAGGGCAGTCATCGAGGGCTCCTCAATGTTGGGCTGTGGGCCCTGAAAACCAATaGTTAAATTTCAGGAATCTT +
Preference number: 5 (lower is better)
Translates to: LNMSCKGQSSRAPQCWAVGPENQ*LNFRNL
Trigger: AAGATTCCTGAAATTTAACAATTGGTTTTCAGGGCC...CACAGCCCAACATTGAGGAGCCCTCGATGACTGCCCTTTACAACTCATATTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9
CDS-3UTR CAA 90 bp AGAGAGGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTAATCTGGACTGCAGTTaGTGGCTTACGGAGAGTCCA +
Preference number: 5 (lower is better)
Translates to: REVYLAFGSADCTRSMVLNLDCS*WLTESP
Trigger: TGGACTCTCCGTAAGCCACAAACTGCAGTCCAGATT...AAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CAA 90 bp TTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCATCTGAATCTGGACTGCAGTTaGTGGCTTACGGAGAGTCCA +
Preference number: 5 (lower is better)
Translates to: FIWLLVLQTVQEAWYLHLNLDCS*WLTESP
Trigger: TGGACTCTCCGTAAGCCACAAACTGCAGTCCAGATT...CAGATGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CAA 90 bp TTGAGAATCTGGACTGCAGTTTGTGGCTTACGGAGAGTCCAAGACGATGGAGGATTAAACAATCAGATCTaGTGGGTGCTAATAGACCAA +
Preference number: 5 (lower is better)
Translates to: LRIWTAVCGLRRVQDDGGLNNQI*WVLIDQ
Trigger: TTGGTCTATTAGCACCCACAAGATCTGATTGTTTAA...TCCTCCATCGTCTTGGACTCTCCGTAAGCCACAAACTGCAGTCCAGATTCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CAA 90 bp TTGTGGCTTACGGAGAGTCCAAGACGATGGAGGAGAGGTGTCCTGATGTGTTTATTAAACAATCAGATCTaGTGGGTGCTAATAGACCAA +
Preference number: 5 (lower is better)
Translates to: LWLTESPRRWRRGVLMCLLNNQI*WVLIDQ
Trigger: TTGGTCTATTAGCACCCACAAGATCTGATTGTTTAA...TAAACACATCAGGACACCTCTCCTCCATCGTCTTGGACTCTCCGTAAGCCACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279477.11
ENST00000565087.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CAA 90 bp TTTGCTGAAAGTGTTCCAGCTTTGGCCTTTGGGAGCTCTTTCAGTTGGTTCCTGTCAAGGGATAAGATGTaGGAAGCTAGTCCAAACTTA +
Preference number: 5 (lower is better)
Translates to: FAESVPALAFGSSFSWFLSRDKM*EASPNL
Trigger: TAAGTTTGGACTAGCTTCCAACATCTTATCCCTTGA...CAGGAACCAACTGAAAGAGCTCCCAAAGGCCAAAGCTGGAACACTTTCAGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR CAA 90 bp CTGAATATGAGTTGTAAAGGGCAGTCATCGAGGGCTCCTCAATGTTGGGCTGTGCAAGTGAGGTTCAAATaGAATGTGAGTGGAATTCTA +
Preference number: 5 (lower is better)
Translates to: LNMSCKGQSSRAPQCWAVQVRFK*NVSGIL
Trigger: TAGAATTCCACTCACATTCAATTTGAACCTCACTTG...CACAGCCCAACATTGAGGAGCCCTCGATGACTGCCCTTTACAACTCATATTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR CAA 90 bp TGGCCAATTGTTACCTTGAACCTTCTAAGTAGTGGTGACCCATGGAGTGTAGGATGGCCAATTGTTACCTaGAACCTTCTAAGTAGTGGT +
Preference number: 5 (lower is better)
Translates to: WPIVTLNLLSSGDPWSVGWPIVT*NLLSSG
Trigger: ACCACTACTTAGAAGGTTCAAGGTAACAATTGGCCA...TCCTACACTCCATGGGTCACCACTACTTAGAAGGTTCAAGGTAACAATTGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565076.1
CDS-3UTR CAA 90 bp ATGTCGTTTTTCTCTTCCAGCATCCCATCCAGGATACCTGTTACATTTACTTGTAATAGAGACACTGCTTaGGGGCATCATGGTCTTGTG +
Preference number: 5 (lower is better)
Translates to: MSFFSSSIPSRIPVTFTCNRDTA*GHHGLV
Trigger: CACAAGACCATGATGCCCCAAAGCAGTGTCTCTATT...ACAAGTAAATGTAACAGGTATCCTGGATGGGATGCTGGAAGAGAAAAACGACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR CAA 90 bp AAAATATCTATCAAGTTGTGCATCAGACTTGACGCACAGTTTCTCCTGGTAGATAGTTGTGCATCAGACTaGACGCACAGTTTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: KISIKLCIRLDAQFLLVDSCASD*THSFSW
Trigger: CCAGGAGAAACTGTGCGTCAAGTCTGATGCACAACT...ATCTACCAGGAGAAACTGTGCGTCAAGTCTGATGCACAACTTGATAGATATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565076.1
CDS-3UTR CAA 90 bp ATCCCATCCAGGATACCTGTTACATTTACTTGTCATATCTCCTCAAGCTTCTCTGTTGGCAGTGTGAAATaGGTCAGGTTGGGAGTTATT +
Preference number: 5 (lower is better)
Translates to: IPSRIPVTFTCHISSSFSVGSVK*VRLGVI
Trigger: AATAACTCCCAACCTGACCAATTTCACACTGCCAAC...AGAGAAGCTTGAGGAGATATGACAAGTAAATGTAACAGGTATCCTGGATGGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR CAA 90 bp ATCCCATCCAGGATACCTGTTACATTTACTTGTCATATCTCCTCAAGCTTCTCTGTTGCACAGTCATTTTaGCAATCTTGCACTGCCATG +
Preference number: 5 (lower is better)
Translates to: IPSRIPVTFTCHISSSFSVAQSF*QSCTAM
Trigger: CATGGCAGTGCAAGATTGCAAAAATGACTGTGCAAC...AGAGAAGCTTGAGGAGATATGACAAGTAAATGTAACAGGTATCCTGGATGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR CAA 90 bp AGAATGATCATTGTTTTTCTGATTGACTATGGAGACTGCTTTCCTGGGTTTCAGTCCATGCTGTACTCTTaGCAAAGAAGTCGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: RMIIVFLIDYGDCFPGFQSMLYS*QRSRSA
Trigger: TGCACTGCGACTTCTTTGCAAAGAGTACAGCATGGA...CTGAAACCCAGGAAAGCAGTCTCCATAGTCAATCAGAAAAACAATGATCATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR CAA 90 bp GGTTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCATCAGGTTTATTTGGCTTTaGGTTCTGCAGACTGTACAA +
Preference number: 5 (lower is better)
Translates to: GLFGFWFCRLYKKHGTCIRFIWL*VLQTVQ
Trigger: TTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCT...GATGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000279477.11
ENST00000562014.5
ENST00000565087.5
ENST00000565230.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CAA 90 bp TATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCATCTGCTAGGTTTATTTGGCTTTaGGTTCTGCAGACTGTACAA +
Preference number: 5 (lower is better)
Translates to: YLAFGSADCTRSMVLASARFIWL*VLQTVQ
Trigger: TTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCT...AGCAGATGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000279477.11
ENST00000562014.5
ENST00000565087.5
ENST00000565230.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CAA 90 bp TTCAGGAATCTTGCAATCTGGTTGTTTAACTGTTGGCAGTGTGAAATTGGTCAGGAAAAGAAACAATGCTaGCTCCGTGTATTAGCCCAT +
Preference number: 5 (lower is better)
Translates to: FRNLAIWLFNCWQCEIGQEKKQC*LRVLAH
Trigger: ATGGGCTAATACACGGAGCAAGCATTGTTTCTTTTC...CTGACCAATTTCACACTGCCAACAGTTAAACAACCAGATTGCAAGATTCCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR CAA 90 bp AGAATGATCATTGTTTTTCTGATTGACTATGGAGACTGCTTTCCTGGGTTTCAGCAGTCACTGTGGGTTTaGGTTTTGGGGTTGACTTTT +
Preference number: 5 (lower is better)
Translates to: RMIIVFLIDYGDCFPGFQQSLWV*VLGLTF
Trigger: AAAAGTCAACCCCAAAACCAAAACCCACAGTGACTG...CTGAAACCCAGGAAAGCAGTCTCCATAGTCAATCAGAAAAACAATGATCATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR CAA 90 bp ATGCTGCAAGTGAGGTTCAAATTGAATGTGAGTGGAATTCTAGAAGTACAAATATTCCAGCTTTGGCCTTaGGGAGCTCTTTCAGTTGGT +
Preference number: 5 (lower is better)
Translates to: MLQVRFKLNVSGILEVQIFQLWP*GALSVG
Trigger: ACCAACTGAAAGAGCTCCCAAAGGCCAAAGCTGGAA...TATTTGTACTTCTAGAATTCCACTCACATTCAATTTGAACCTCACTTGCAGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381605.9
CDS-3UTR CAA 90 bp TTTATTTGGCTTTTGGTTCTGCAGACTGTACAAGAAGCATGGTACTTGCATCTGAGGTTTATTTGGCTTTaGGTTCTGCAGACTGTACAA +
Preference number: 5 (lower is better)
Translates to: FIWLLVLQTVQEAWYLHLRFIWL*VLQTVQ
Trigger: TTGTACAGTCTGCAGAACCAAAAGCCAAATAAACCT...CAGATGCAAGTACCATGCTTCTTGTACAGTCTGCAGAACCAAAAGCCAAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000279477.11
ENST00000562014.5
ENST00000565087.5
ENST00000565230.5
ENST00000566055.5
ENST00000569387.5
CDS-3UTR CAA 90 bp TTCAGGAATCTTGCAATCTGGTTGTTTAACTGTTGGCAGTGTGAAATTGGTCAGACTGCAAAACAGCTTTaGGTTTTTCCCTTTCAGAAA +
Preference number: 5 (lower is better)
Translates to: FRNLAIWLFNCWQCEIGQTAKQL*VFPFQK
Trigger: TTTCTGAAAGGGAAAAACCAAAAGCTGTTTTGCAGT...CTGACCAATTTCACACTGCCAACAGTTAAACAACCAGATTGCAAGATTCCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262929.9
ENST00000381603.7
ENST00000381605.9