RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SIRPA (Homo sapiens)

Ensembl gene IDs: ENSG00000198053

Ensembl transcript IDs: ENST00000356025.7, ENST00000358771.5, ENST00000400068.7, ENST00000622179.4

Found 416 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGCCCTGGGCAGGCTGGACTTACCACAGCGGGGTCACAGAAGGCTaGACTACCAGCCGCGTGGCTCAGCTGAGAACATGGCCAAGTCAG +
Preference number: 1 (lower is better)
Translates to: QPWAGWTYHSGVTEG*TTSRVAQLRTWPSQ
Trigger: CTGACTTGGCCATGTTCTCAGCTGAGCCACGCGGCTGGTAGTGCAGCCTTCTGTGACCCCGCTGTGGTAAGTCCAGCCTGCCCAGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR CCA 90 bp AAGACTGCACTGTCAAGAGGCAGCCCTCAGCAGCCCTGGGCAGGCTaGACTTACCACAGCGGGGTCACAGAAGGCTGCACTACCAGCCGC +
Preference number: 1 (lower is better)
Translates to: KTALSRGSPQQPWAG*TYHSGVTEGCTTSR
Trigger: GCGGCTGGTAGTGCAGCCTTCTGTGACCCCGCTGTGGTAAGTCCAGCCTGCCCAGGGCTGCTGAGGGCTGCCTCTTGACAGTGCAGTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR CCA 90 bp TGCTTGCCCTGGGCCCGGTCAGGCCCTCACACCCGACTGGAAGGGTaGGGGTTAAAGGGTAACTGGGTCACACCCTCTGGCCAACCTTCT +
Preference number: 1 (lower is better)
Translates to: CLPWARSGPHTRLEG*GLKGNWVTPSGQPS
Trigger: AGAAGGTTGGCCAGAGGGTGTGACCCAGTTACCCTTTAACCCCCACCCTTCCAGTCGGGTGTGAGGGCCTGACCGGGCCCAGGGCAAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR TCA 90 bp ACAGCGGGGTCACAGAAGGCTGCACTACCAGCCGCGTGGCTCAGCTaGGAACATGGCCAAGTCAGTCCCAGCCAGAAGGCTGTGTCTCCA +
Preference number: 1 (lower is better)
Translates to: TAGSQKAALPAAWLS*EHGQVSPSQKAVSP
Trigger: TGGAGACACAGCCTTCTGGCTGGGACTGACTTGGCCATGTTCTCAGCTGAGCCACGCGGCTGGTAGTGCAGCCTTCTGTGACCCCGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR CCA 90 bp GTCACAGAAGGCTGCACTACCAGCCGCGTGGCTCAGCTGAGAACATaGCCAAGTCAGTCCCAGCCAGAAGGCTGTGTCTCCAGGGAGTGG +
Preference number: 1 (lower is better)
Translates to: VTEGCTTSRVAQLRT*PSQSQPEGCVSREW
Trigger: CCACTCCCTGGAGACACAGCCTTCTGGCTGGGACTGACTTGGCCATGTTCTCAGCTGAGCCACGCGGCTGGTAGTGCAGCCTTCTGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR CCA 90 bp TCAGGCCCTCACACCCGACTGGAAGGGTGGGGGTTAAAGGGTAACTaGGTCACACCCTCTGGCCAACCTTCTGGGACAGAGGGGGAATCA +
Preference number: 1 (lower is better)
Translates to: SGPHTRLEGWGLKGN*VTPSGQPSGTEGES
Trigger: TGATTCCCCCTCTGTCCCAGAAGGTTGGCCAGAGGGTGTGACCCAGTTACCCTTTAACCCCCACCCTTCCAGTCGGGTGTGAGGGCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR TCA 90 bp TGGCCTACCCAGTGCCAAGCGTGGGCTCAGTGCTTCCAACCTCCTTaGATCCACACAGTCACCCTGGCAGGGACTATTCCTGCCCCATTG +
Preference number: 1 (lower is better)
Translates to: WPTQCQAWAQCFQPP*IHTVTLAGTIPAPL
Trigger: CAATGGGGCAGGAATAGTCCCTGCCAGGGTGACTGTGTGGATTCAAGGAGGTTGGAAGCACTGAGCCCACGCTTGGCACTGGGTAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR GCA 90 bp CACCAGGTGACCATCCCCCAGAGAGCTGGGTCTATGCTGAGCTCCTaGAGTTTCACCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCA +
Preference number: 1 (lower is better)
Translates to: HQVTIPQRAGSMLSS*SFTCRTSRNGQDGS
Trigger: TGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGGTGAAACTGCAGGAGCTCAGCATAGACCCAGCTCTCTGGGGGATGGTCACCTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR TCA 90 bp AGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTTTTACAGCCTaGGCCAGAAATCCCTTGGGCATCCCAAGGCCAGGAGTCATGAAC +
Preference number: 1 (lower is better)
Translates to: RTSRNGQDGSATFTA*ARNPLGIPRPGVMN
Trigger: GTTCATGACTCCTGGCCTTGGGATGCCCAAGGGATTTCTGGCTCAGGCTGTAAAAGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR GCA 90 bp GCCAACCTTCTGGGACAGAGGGGGAATCAGCCCGAGCTTCACAGCTaGACCATCCCCCTGGCTGTCTTCAATTTATTCCAGTTTGATCCC +
Preference number: 1 (lower is better)
Translates to: ANLLGQRGNQPELHS*TIPLAVFNLFQFDP
Trigger: GGGATCAAACTGGAATAAATTGAAGACAGCCAGGGGGATGGTGCAGCTGTGAAGCTCGGGCTGATTCCCCCTCTGTCCCAGAAGGTTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR CCA 90 bp GACAGAGGGGGAATCAGCCCGAGCTTCACAGCTGCACCATCCCCCTaGCTGTCTTCAATTTATTCCAGTTTGATCCCAGTAGGGTTTGAG +
Preference number: 1 (lower is better)
Translates to: DRGGISPSFTAAPSP*LSSIYSSLIPVGFE
Trigger: CTCAAACCCTACTGGGATCAAACTGGAATAAATTGAAGACAGCCAGGGGGATGGTGCAGCTGTGAAGCTCGGGCTGATTCCCCCTCTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR CCA 90 bp CTCTGGCCAAAGCTGTCCACATGGTCTGTTGGCTCAGCTAATTCCTaGATGCCATCATTGAAATCACCAGGTGACCATCCCCCAGAGAGC +
Preference number: 1 (lower is better)
Translates to: LWPKLSTWSVGSANS*MPSLKSPGDHPPES
Trigger: GCTCTCTGGGGGATGGTCACCTGGTGATTTCAATGATGGCATCCAGGAATTAGCTGAGCCAACAGACCATGTGGACAGCTTTGGCCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR CCA 90 bp TGGCTCCCAGATGCCACACGGGAGCTCTGGCCAAAGCTGTCCACATaGTCTGTTGGCTCAGCTAATTCCTGGATGCCATCATTGAAATCA +
Preference number: 1 (lower is better)
Translates to: WLPDATRELWPKLST*SVGSANSWMPSLKS
Trigger: TGATTTCAATGATGGCATCCAGGAATTAGCTGAGCCAACAGACCATGTGGACAGCTTTGGCCAGAGCTCCCGTGTGGCATCTGGGAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR CCA 90 bp TCATCTGGCAAGGATATTACAGGACAAGCATTAGATGTCTGCATTTaGTGGGGAAGGAAAGTGAGGCCCCAGGAGGAGGGTGAGCCGGGT +
Preference number: 1 (lower is better)
Translates to: SSGKDITGQALDVCI*WGRKVRPQEEGEPG
Trigger: ACCCGGCTCACCCTCCTCCTGGGGCCTCACTTTCCTTCCCCACCAAATGCAGACATCTAATGCTTGTCCTGTAATATCCTTGCCAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR TCA 90 bp TGTCCACATGGTCTGTTGGCTCAGCTAATTCCTGGATGCCATCATTaGAATCACCAGGTGACCATCCCCCAGAGAGCTGGGTCTATGCTG +
Preference number: 1 (lower is better)
Translates to: CPHGLLAQLIPGCHH*NHQVTIPQRAGSML
Trigger: CAGCATAGACCCAGCTCTCTGGGGGATGGTCACCTGGTGATTTCAATGATGGCATCCAGGAATTAGCTGAGCCAACAGACCATGTGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR CCA 90 bp CTGTGTCTCCAGGGAGTGGCTGACCTGATCCTTCTTGCCCATTCTTaGGGTTCTGGGACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAA +
Preference number: 1 (lower is better)
Translates to: LCLQGVADLILLAHS*GSGTWRNSSLRCKK
Trigger: TTTCTTACAGCGAAGACTTGAGTTCCTCCAAGTCCCAGAACCCCAAGAATGGGCAAGAAGGATCAGGTCAGCCACTCCCTGGAGACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR TCA 90 bp AGGCCCCGAGGCGGCCCCGGGACGCACTCACAAAGACAAGAATACTaGACACCGGAAGGACTCATTATTACCCAGAAATCTTTATTACAA +
Preference number: 1 (lower is better)
Translates to: RPRGGPGTHSQRQEY*TPEGLIITQKSLLQ
Trigger: TTGTAATAAAGATTTCTGGGTAATAATGAGTCCTTCCGGTGTTCAGTATTCTTGTCTTTGTGAGTGCGTCCCGGGGCCGCCTCGGGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR CCA 90 bp CAGCTACAAAGCAGCAGAGCCGAGATCCAAACTCAGTTGTCTATATaGAATTTTATCTCAACCTTACACCGGCTCCTTCTGAGCCAGGGC +
Preference number: 1 (lower is better)
Translates to: QLQSSRAEIQTQLSI*NFISTLHRLLLSQG
Trigger: GCCCTGGCTCAGAAGGAGCCGGTGTAAGGTTGAGATAAAATTCCATATAGACAACTGAGTTTGGATCTCGGCTCTGCTGCTTTGTAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR CCA 90 bp CAGGACAACAAACTGTTAAACCTCAGACTTCACAAGACCCAACCATaGACTTCAACACATGACAGACAGCCAAGATCACGTTGCTGTTGT +
Preference number: 1 (lower is better)
Translates to: QDNKLLNLRLHKTQP*TSTHDRQPRSRCCC
Trigger: ACAACAGCAACGTGATCTTGGCTGTCTGTCATGTGTTGAAGTCCATGGTTGGGTCTTGTGAAGTCTGAGGTTTAACAGTTTGTTGTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR CCA 90 bp TGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTaGATTCTCCAGGTTGCCAGGCTAAAGCTAAAGCTATACATCTTC +
Preference number: 1 (lower is better)
Translates to: WFDLFLFLGFNTQGM*ILQVARLKLKLYIF
Trigger: GAAGATGTATAGCTTTAGCTTTAGCCTGGCAACCTGGAGAATCCACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR TCA 90 bp CCCCTGGCTGTCTTCAATTTATTCCAGTTTGATCCCAGTAGGGTTTaGGAGCAGAAATGGAAGATTTCTTCTTCAAGGATCAGCTCAGAA +
Preference number: 1 (lower is better)
Translates to: PLAVFNLFQFDPSRV*EQKWKISSSRISSE
Trigger: TTCTGAGCTGATCCTTGAAGAAGAAATCTTCCATTTCTGCTCTCAAACCCTACTGGGATCAAACTGGAATAAATTGAAGACAGCCAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR GCA 90 bp GAGGGCAGGCAGGCCCCGAGGCGGCCCCGGGACGCACTCACAAAGACAAGAATAGGGGTCACAGAAGGCTaGACTACCAGCCGCGTGGCT +
Preference number: 2 (lower is better)
Translates to: EGRQAPRRPRDALTKTRIGVTEG*TTSRVA
Trigger: AGCCACGCGGCTGGTAGTGCAGCCTTCTGTGACCCC...TATTCTTGTCTTTGTGAGTGCGTCCCGGGGCCGCCTCGGGGCCTGCCTGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR GCA 90 bp GAGGGCAGGCAGGCCCCGAGGCGGCCCCGGGACGCACTCACAAAGACAAGAATAAGGGCTTGCGACATCTaGTTGCCCTGGGCCCGGTCA +
Preference number: 2 (lower is better)
Translates to: EGRQAPRRPRDALTKTRIRACDI*LPWARS
Trigger: TGACCGGGCCCAGGGCAAGCAGATGTCGCAAGCCCT...TATTCTTGTCTTTGTGAGTGCGTCCCGGGGCCGCCTCGGGGCCTGCCTGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR CCA 90 bp TGGGCCCGGTCAGGCCCTCACACCCGACTGGAAGGGTGGGGGTTAAAGGGTAACAGCCCTCAGCAGCCCTaGGCAGGCTGGACTTACCAC +
Preference number: 2 (lower is better)
Translates to: WARSGPHTRLEGWGLKGNSPQQP*AGWTYH
Trigger: GTGGTAAGTCCAGCCTGCCCAGGGCTGCTGAGGGCT...GTTACCCTTTAACCCCCACCCTTCCAGTCGGGTGTGAGGGCCTGACCGGGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp TGGGCCCGGTCAGGCCCTCACACCCGACTGGAAGGGTGGGGGTTAAAGGGTAACCACGGCGGCTCCCTGTaGGACAAGAAAGCGCGTAGA +
Preference number: 2 (lower is better)
Translates to: WARSGPHTRLEGWGLKGNHGGSL*DKKARR
Trigger: TCTACGCGCTTTCTTGTCCCACAGGGAGCCGCCGTG...GTTACCCTTTAACCCCCACCCTTCCAGTCGGGTGTGAGGGCCTGACCGGGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp CCCATCAGTGGTGAGAGGCCACGAGACTCAGCTATGCAGGGTCAGGGCAGGAAGCACGGCGGCTCCCTGTaGGACAAGAAAGCGCGTAGA +
Preference number: 2 (lower is better)
Translates to: PISGERPRDSAMQGQGRKHGGSL*DKKARR
Trigger: TCTACGCGCTTTCTTGTCCCACAGGGAGCCGCCGTG...CTTCCTGCCCTGACCCTGCATAGCTGAGTCTCGTGGCCTCTCACCACTGATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR CCA 90 bp GAGGGCAGGCAGGCCCCGAGGCGGCCCCGGGACGCACTCACAAAGACAAGAATAGCTTATGAGAGGTGGTaGGGAGGGGTGTCATCTTCA +
Preference number: 2 (lower is better)
Translates to: EGRQAPRRPRDALTKTRIAYERW*GGVSSS
Trigger: TGAAGATGACACCCCTCCCCACCACCTCTCATAAGC...TATTCTTGTCTTTGTGAGTGCGTCCCGGGGCCGCCTCGGGGCCTGCCTGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR CCA 90 bp TGGGCCCGGTCAGGCCCTCACACCCGACTGGAAGGGTGGGGGTTAAAGGGTAACTGGGGTTCTGGGACTTaGAGGAACTCAAGTCTTCGC +
Preference number: 2 (lower is better)
Translates to: WARSGPHTRLEGWGLKGNWGSGT*RNSSLR
Trigger: GCGAAGACTTGAGTTCCTCCAAGTCCCAGAACCCCA...GTTACCCTTTAACCCCCACCCTTCCAGTCGGGTGTGAGGGCCTGACCGGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp TGTTTCCAAACCCTGGGGTCCATTCAATCCTCTTCCAGGCTTTGGCAGGAGGGCCAGCCCTGGGCAGGCTaGACTTACCACAGCGGGGTC +
Preference number: 2 (lower is better)
Translates to: CFQTLGSIQSSSRLWQEGQPWAG*TYHSGV
Trigger: GACCCCGCTGTGGTAAGTCCAGCCTGCCCAGGGCTG...GCCCTCCTGCCAAAGCCTGGAAGAGGATTGAATGGACCCCAGGGTTTGGAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR CCA 90 bp TGGGCCCGGTCAGGCCCTCACACCCGACTGGAAGGGTGGGGGTTAAAGGGTAACGCTTATGAGAGGTGGTaGGGAGGGGTGTCATCTTCA +
Preference number: 2 (lower is better)
Translates to: WARSGPHTRLEGWGLKGNAYERW*GGVSSS
Trigger: TGAAGATGACACCCCTCCCCACCACCTCTCATAAGC...GTTACCCTTTAACCCCCACCCTTCCAGTCGGGTGTGAGGGCCTGACCGGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp CAGGAGGAGGGTGAGCCGGGTGTCCGAGATCCCATCAGTGGTGAGAGGCCACGAGGGTTAAAGGGTAACTaGGTCACACCCTCTGGCCAA +
Preference number: 2 (lower is better)
Translates to: QEEGEPGVRDPISGERPRGLKGN*VTPSGQ
Trigger: TTGGCCAGAGGGTGTGACCCAGTTACCCTTTAACCC...TCGTGGCCTCTCACCACTGATGGGATCTCGGACACCCGGCTCACCCTCCTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR CCA 90 bp CCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTTTTACAGCCTGAGGACATCTGCTTGCCCTaGGCCCGGTCAGGCCCTCAC +
Preference number: 2 (lower is better)
Translates to: PVGPPGMGRMAQLLLQPEDICLP*ARSGPH
Trigger: GTGAGGGCCTGACCGGGCCCAGGGCAAGCAGATGTC...CTCAGGCTGTAAAAGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR TCA 90 bp CCCATCAGTGGTGAGAGGCCACGAGACTCAGCTATGCAGGGTCAGGGCAGGAAGGAGCTGGGTCTATGCTaGGCTCCTGCAGTTTCACCT +
Preference number: 2 (lower is better)
Translates to: PISGERPRDSAMQGQGRKELGLC*APAVSP
Trigger: AGGTGAAACTGCAGGAGCTCAGCATAGACCCAGCTC...CTTCCTGCCCTGACCCTGCATAGCTGAGTCTCGTGGCCTCTCACCACTGATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR TCA 90 bp CCCATCAGTGGTGAGAGGCCACGAGACTCAGCTATGCAGGGTCAGGGCAGGAAGAATTTGGAACTAGCCTaGGCCAGGTGGCTGGGTCAC +
Preference number: 2 (lower is better)
Translates to: PISGERPRDSAMQGQGRKNLELA*ARWLGH
Trigger: GTGACCCAGCCACCTGGCTCAGGCTAGTTCCAAATT...CTTCCTGCCCTGACCCTGCATAGCTGAGTCTCGTGGCCTCTCACCACTGATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR CCA 90 bp TGGGCCCGGTCAGGCCCTCACACCCGACTGGAAGGGTGGGGGTTAAAGGGTAACCCATTCTTGGGGTTCTaGGACTTGGAGGAACTCAAG +
Preference number: 2 (lower is better)
Translates to: WARSGPHTRLEGWGLKGNPFLGF*DLEELK
Trigger: CTTGAGTTCCTCCAAGTCCCAGAACCCCAAGAATGG...GTTACCCTTTAACCCCCACCCTTCCAGTCGGGTGTGAGGGCCTGACCGGGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp TACCACAGCGGGGTCACAGAAGGCTGCACTACCAGCCGCGTGGCTCAGCTGAGACTTCTTGCCCATTCTTaGGGTTCTGGGACTTGGAGG +
Preference number: 2 (lower is better)
Translates to: YHSGVTEGCTTSRVAQLRLLAHS*GSGTWR
Trigger: CCTCCAAGTCCCAGAACCCCAAGAATGGGCAAGAAG...TCTCAGCTGAGCCACGCGGCTGGTAGTGCAGCCTTCTGTGACCCCGCTGTGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp AGCTCTGGCCAAAGCTGTCCACATGGTCTGTTGGCTCAGCTAATTCCTGGATGCCAGCCCTGGGCAGGCTaGACTTACCACAGCGGGGTC +
Preference number: 2 (lower is better)
Translates to: SSGQSCPHGLLAQLIPGCQPWAG*TYHSGV
Trigger: GACCCCGCTGTGGTAAGTCCAGCCTGCCCAGGGCTG...GCATCCAGGAATTAGCTGAGCCAACAGACCATGTGGACAGCTTTGGCCAGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp CAGGAGGAGGGTGAGCCGGGTGTCCGAGATCCCATCAGTGGTGAGAGGCCACGAAGCAGACTGAGGCATTaGGTCTCGATAAGACTGCAC +
Preference number: 2 (lower is better)
Translates to: QEEGEPGVRDPISGERPRSRLRH*VSIRLH
Trigger: GTGCAGTCTTATCGAGACCCAATGCCTCAGTCTGCT...TCGTGGCCTCTCACCACTGATGGGATCTCGGACACCCGGCTCACCCTCCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR CCA 90 bp CAGGAGGAGGGTGAGCCGGGTGTCCGAGATCCCATCAGTGGTGAGAGGCCACGACGTATGTGCTGTCTCTaGGTAAAAGAGAGGGAGACG +
Preference number: 2 (lower is better)
Translates to: QEEGEPGVRDPISGERPRRMCCL*VKERET
Trigger: CGTCTCCCTCTCTTTTACCCAGAGACAGCACATACG...TCGTGGCCTCTCACCACTGATGGGATCTCGGACACCCGGCTCACCCTCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR CAA 90 bp ATGGCCTACCCAGTGCCAAGCGTGGGCTCAGTGCTTCCAACCTCCTaGAATCCACACAGTCACCCTGGCAGGGACTATTCCTGCCCCATT +
Preference number: 2 (lower is better)
Translates to: MAYPVPSVGSVLPTS*NPHSHPGRDYSCPI
Trigger: AATGGGGCAGGAATAGTCCCTGCCAGGGTGACTGTGTGGATTCAAGGAGGTTGGAAGCACTGAGCCCACGCTTGGCACTGGGTAGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR TCA 90 bp CCCATCAGTGGTGAGAGGCCACGAGACTCAGCTATGCAGGGTCAGGGCAGGAAGGCTACTTTTACAGCCTaGGCCAGAAATCCCTTGGGC +
Preference number: 2 (lower is better)
Translates to: PISGERPRDSAMQGQGRKATFTA*ARNPLG
Trigger: GCCCAAGGGATTTCTGGCTCAGGCTGTAAAAGTAGC...CTTCCTGCCCTGACCCTGCATAGCTGAGTCTCGTGGCCTCTCACCACTGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR GCA 90 bp CCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTTTTACAGCCTGAGGAACTGGGTTGGCTGTaGTCATCACGGCGGCTCCCT +
Preference number: 2 (lower is better)
Translates to: PVGPPGMGRMAQLLLQPEELGWL*SSRRLP
Trigger: AGGGAGCCGCCGTGATGAGCACAGCCAACCCAGTTC...CTCAGGCTGTAAAAGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR GCA 90 bp AGCTCTGGCCAAAGCTGTCCACATGGTCTGTTGGCTCAGCTAATTCCTGGATGCAGGGCTTGCGACATCTaGTTGCCCTGGGCCCGGTCA +
Preference number: 2 (lower is better)
Translates to: SSGQSCPHGLLAQLIPGCRACDI*LPWARS
Trigger: TGACCGGGCCCAGGGCAAGCAGATGTCGCAAGCCCT...GCATCCAGGAATTAGCTGAGCCAACAGACCATGTGGACAGCTTTGGCCAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR GCA 90 bp CAGGAGGAGGGTGAGCCGGGTGTCCGAGATCCCATCAGTGGTGAGAGGCCACGACGTGAGGGGCTCAAATaGTGTAGGTTGTTTCCAAAC +
Preference number: 2 (lower is better)
Translates to: QEEGEPGVRDPISGERPRREGLK*CRLFPN
Trigger: GTTTGGAAACAACCTACAGCATTTGAGCCCCTCACG...TCGTGGCCTCTCACCACTGATGGGATCTCGGACACCCGGCTCACCCTCCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR CCA 90 bp AGCTCTGGCCAAAGCTGTCCACATGGTCTGTTGGCTCAGCTAATTCCTGGATGCCTGCCCAGGAAGTGCTaGAGAGCCAAGGAGGGGTGG +
Preference number: 2 (lower is better)
Translates to: SSGQSCPHGLLAQLIPGCLPRKC*RAKEGW
Trigger: CCACCCCTCCTTGGCTCTCCAGCACTTCCTGGGCAG...GCATCCAGGAATTAGCTGAGCCAACAGACCATGTGGACAGCTTTGGCCAGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp CCCATCAGTGGTGAGAGGCCACGAGACTCAGCTATGCAGGGTCAGGGCAGGAAGTGGGGTTCTGGGACTTaGAGGAACTCAAGTCTTCGC +
Preference number: 2 (lower is better)
Translates to: PISGERPRDSAMQGQGRKWGSGT*RNSSLR
Trigger: GCGAAGACTTGAGTTCCTCCAAGTCCCAGAACCCCA...CTTCCTGCCCTGACCCTGCATAGCTGAGTCTCGTGGCCTCTCACCACTGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR CCA 90 bp TGTTTCCAAACCCTGGGGTCCATTCAATCCTCTTCCAGGCTTTGGCAGGAGGGCCTCAGAAAGCCGGGATaGGGGCGGTCACTAAAGGGG +
Preference number: 2 (lower is better)
Translates to: CFQTLGSIQSSSRLWQEGLRKPG*GRSLKG
Trigger: CCCCTTTAGTGACCGCCCCCATCCCGGCTTTCTGAG...GCCCTCCTGCCAAAGCCTGGAAGAGGATTGAATGGACCCCAGGGTTTGGAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR GCA 90 bp AGCTCTGGCCAAAGCTGTCCACATGGTCTGTTGGCTCAGCTAATTCCTGGATGCGAACTGGGTTGGCTGTaGTCATCACGGCGGCTCCCT +
Preference number: 2 (lower is better)
Translates to: SSGQSCPHGLLAQLIPGCELGWL*SSRRLP
Trigger: AGGGAGCCGCCGTGATGAGCACAGCCAACCCAGTTC...GCATCCAGGAATTAGCTGAGCCAACAGACCATGTGGACAGCTTTGGCCAGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR GCA 90 bp CCCATTCTTGGGGTTCTGGGACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAAGGAGGGGGCCGTGGCTaGCCAGGAAGTGCTGGAGAG +
Preference number: 2 (lower is better)
Translates to: PILGVLGLGGTQVFAVRKGGGRG*PGSAGE
Trigger: CTCTCCAGCACTTCCTGGGCAGCCACGGCCCCCTCC...TTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGTCCCAGAACCCCAAGAATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR GCA 90 bp GAGGTGCTGTTTGAACTCCCACAGCTACAAAGCAGCAGAGCCGAGATCCAAACTAGGGCTTGCGACATCTaGTTGCCCTGGGCCCGGTCA +
Preference number: 2 (lower is better)
Translates to: EVLFELPQLQSSRAEIQTRACDI*LPWARS
Trigger: TGACCGGGCCCAGGGCAAGCAGATGTCGCAAGCCCT...AGTTTGGATCTCGGCTCTGCTGCTTTGTAGCTGTGGGAGTTCAAACAGCACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR CCA 90 bp TCCTTCCGCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGAGCCCTCAGCAGCCCTaGGCAGGCTGGACTTACCAC +
Preference number: 2 (lower is better)
Translates to: SFRRVGSTSSFSWGSIHKSPQQP*AGWTYH
Trigger: GTGGTAAGTCCAGCCTGCCCAGGGCTGCTGAGGGCT...CTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGCGGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp GAGGTGCTGTTTGAACTCCCACAGCTACAAAGCAGCAGAGCCGAGATCCAAACTAGCCCTCAGCAGCCCTaGGCAGGCTGGACTTACCAC +
Preference number: 2 (lower is better)
Translates to: EVLFELPQLQSSRAEIQTSPQQP*AGWTYH
Trigger: GTGGTAAGTCCAGCCTGCCCAGGGCTGCTGAGGGCT...AGTTTGGATCTCGGCTCTGCTGCTTTGTAGCTGTGGGAGTTCAAACAGCACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR CCA 90 bp CCCATCAGTGGTGAGAGGCCACGAGACTCAGCTATGCAGGGTCAGGGCAGGAAGGCTGCACCATCCCCCTaGCTGTCTTCAATTTATTCC +
Preference number: 2 (lower is better)
Translates to: PISGERPRDSAMQGQGRKAAPSP*LSSIYS
Trigger: GGAATAAATTGAAGACAGCCAGGGGGATGGTGCAGC...CTTCCTGCCCTGACCCTGCATAGCTGAGTCTCGTGGCCTCTCACCACTGATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR CCA 90 bp TCCTGCAGTTTCACCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTCTCTGGCCAACCTTCTaGGACAGAGGGGGAATCAGC +
Preference number: 2 (lower is better)
Translates to: SCSFTCRTSRNGQDGSATLWPTF*DRGGIS
Trigger: GCTGATTCCCCCTCTGTCCCAGAAGGTTGGCCAGAG...AGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGGTGAAACTGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp GCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGACATCTGCTTGCCCTaGGCCCGGTCAGGCCCTCAC +
Preference number: 2 (lower is better)
Translates to: AGLVRPLPFPGVQYTRYVDICLP*ARSGPH
Trigger: GTGAGGGCCTGACCGGGCCCAGGGCAAGCAGATGTC...CACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp TCCTGCAGTTTCACCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTGAGCCAGAAATCCCTTaGGCATCCCAAGGCCAGGAG +
Preference number: 2 (lower is better)
Translates to: SCSFTCRTSRNGQDGSATEPEIP*ASQGQE
Trigger: CTCCTGGCCTTGGGATGCCCAAGGGATTTCTGGCTC...AGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGGTGAAACTGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR TCA 90 bp TCCTTCCGCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGCCGCGTGGCTCAGCTaGGAACATGGCCAAGTCAGT +
Preference number: 2 (lower is better)
Translates to: SFRRVGSTSSFSWGSIHKAAWLS*EHGQVS
Trigger: ACTGACTTGGCCATGTTCTCAGCTGAGCCACGCGGC...CTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGCGGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR GCA 90 bp CCGGGACGCACTCACAAAGACAAGAATACTGAACACCGGAAGGACTCATTATTAGGAGGGGGCCGTGGCTaGCCAGGAAGTGCTGGAGAG +
Preference number: 2 (lower is better)
Translates to: PGRTHKDKNTEHRKDSLLGGGRG*PGSAGE
Trigger: CTCTCCAGCACTTCCTGGGCAGCCACGGCCCCCTCC...TAATAATGAGTCCTTCCGGTGTTCAGTATTCTTGTCTTTGTGAGTGCGTCCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR CCA 90 bp TCCTGCAGTTTCACCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTTCTAGAAGGGAGAGATaGGTCCGGGTGGAGCAACAC +
Preference number: 2 (lower is better)
Translates to: SCSFTCRTSRNGQDGSATSRRER*VRVEQH
Trigger: GTGTTGCTCCACCCGGACCCATCTCTCCCTTCTAGA...AGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGGTGAAACTGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp AGCTCTGGCCAAAGCTGTCCACATGGTCTGTTGGCTCAGCTAATTCCTGGATGCCTGGGTCACACCCTCTaGCCAACCTTCTGGGACAGA +
Preference number: 2 (lower is better)
Translates to: SSGQSCPHGLLAQLIPGCLGHTL*PTFWDR
Trigger: TCTGTCCCAGAAGGTTGGCCAGAGGGTGTGACCCAG...GCATCCAGGAATTAGCTGAGCCAACAGACCATGTGGACAGCTTTGGCCAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp GCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGCCTGAGCCAGGTGGCTaGGTCACTGTGGCTCCCAGA +
Preference number: 2 (lower is better)
Translates to: AGLVRPLPFPGVQYTRYVPEPGG*VTVAPR
Trigger: TCTGGGAGCCACAGTGACCCAGCCACCTGGCTCAGG...CACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR TCA 90 bp TCCTGCAGTTTCACCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTAGGGAGTGGCTGACCTaGTCCTTCTTGCCCATTCTT +
Preference number: 2 (lower is better)
Translates to: SCSFTCRTSRNGQDGSATREWLT*SFLPIL
Trigger: AAGAATGGGCAAGAAGGATCAGGTCAGCCACTCCCT...AGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGGTGAAACTGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR GCA 90 bp ACTTTACGGATGAGCAGACTGAGGCATTGGGTCTCGATAAGACTGCACTGTCAAGGGGTCACAGAAGGCTaGACTACCAGCCGCGTGGCT +
Preference number: 2 (lower is better)
Translates to: TLRMSRLRHWVSIRLHCQGVTEG*TTSRVA
Trigger: AGCCACGCGGCTGGTAGTGCAGCCTTCTGTGACCCC...TTGACAGTGCAGTCTTATCGAGACCCAATGCCTCAGTCTGCTCATCCGTAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR GCA 90 bp CCGGGACGCACTCACAAAGACAAGAATACTGAACACCGGAAGGACTCATTATTACTTGCGACATCTGCTTaGCCTGGGCCCGGTCAGGCC +
Preference number: 2 (lower is better)
Translates to: PGRTHKDKNTEHRKDSLLLATSA*PGPGQA
Trigger: GGCCTGACCGGGCCCAGGGCAAGCAGATGTCGCAAG...TAATAATGAGTCCTTCCGGTGTTCAGTATTCTTGTCTTTGTGAGTGCGTCCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR CCA 90 bp GCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGCTCAGAAAGCCGGGATaGGGGCGGTCACTAAAGGGG +
Preference number: 2 (lower is better)
Translates to: AGLVRPLPFPGVQYTRYVLRKPG*GRSLKG
Trigger: CCCCTTTAGTGACCGCCCCCATCCCGGCTTTCTGAG...CACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp TCCTGCAGTTTCACCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTGGGTTAAAGGGTAACTaGGTCACACCCTCTGGCCAA +
Preference number: 2 (lower is better)
Translates to: SCSFTCRTSRNGQDGSATGLKGN*VTPSGQ
Trigger: TTGGCCAGAGGGTGTGACCCAGTTACCCTTTAACCC...AGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGGTGAAACTGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp AAGAGGTGCTGTTTGAACTCCCACAGCTACAAAGCAGCAGAGCCGAGATCCAAAGCCACACGGGAGCTCTaGCCAAAGCTGTCCACATGG +
Preference number: 2 (lower is better)
Translates to: KRCCLNSHSYKAAEPRSKATREL*PKLSTW
Trigger: CCATGTGGACAGCTTTGGCCAGAGCTCCCGTGTGGC...TTTGGATCTCGGCTCTGCTGCTTTGTAGCTGTGGGAGTTCAAACAGCACCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR TCA 90 bp TCCTGCAGTTTCACCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTCAAGGCCAGGAGTCATaGACATTAGCGTCTCAACTC +
Preference number: 2 (lower is better)
Translates to: SCSFTCRTSRNGQDGSATQGQES*TLASQL
Trigger: GAGTTGAGACGCTAATGTTCATGACTCCTGGCCTTG...AGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGGTGAAACTGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR TCA 90 bp AGCTCTGGCCAAAGCTGTCCACATGGTCTGTTGGCTCAGCTAATTCCTGGATGCATTGAAATCACCAGGTaGCCATCCCCCAGAGAGCTG +
Preference number: 2 (lower is better)
Translates to: SSGQSCPHGLLAQLIPGCIEITR*PSPREL
Trigger: CAGCTCTCTGGGGGATGGTCACCTGGTGATTTCAAT...GCATCCAGGAATTAGCTGAGCCAACAGACCATGTGGACAGCTTTGGCCAGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR TCA 90 bp TGTTTCCAAACCCTGGGGTCCATTCAATCCTCTTCCAGGCTTTGGCAGGAGGGCCCTGGATGCCATCATTaGAATCACCAGGTGACCATC +
Preference number: 2 (lower is better)
Translates to: CFQTLGSIQSSSRLWQEGPGCHH*NHQVTI
Trigger: GATGGTCACCTGGTGATTTCAATGATGGCATCCAGG...GCCCTCCTGCCAAAGCCTGGAAGAGGATTGAATGGACCCCAGGGTTTGGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR GCA 90 bp GGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGATTGGGGTCACAGAAGGCTaGACTACCAGCCGCGTGGCT +
Preference number: 2 (lower is better)
Translates to: GWFDLFLFLGFNTQGMWIGVTEG*TTSRVA
Trigger: AGCCACGCGGCTGGTAGTGCAGCCTTCTGTGACCCC...AATCCACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp TCCTGCAGTTTCACCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTCCATTCTTGGGGTTCTaGGACTTGGAGGAACTCAAG +
Preference number: 2 (lower is better)
Translates to: SCSFTCRTSRNGQDGSATPFLGF*DLEELK
Trigger: CTTGAGTTCCTCCAAGTCCCAGAACCCCAAGAATGG...AGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGGTGAAACTGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp AGCTCTGGCCAAAGCTGTCCACATGGTCTGTTGGCTCAGCTAATTCCTGGATGCCTTCTTGCCCATTCTTaGGGTTCTGGGACTTGGAGG +
Preference number: 2 (lower is better)
Translates to: SSGQSCPHGLLAQLIPGCLLAHS*GSGTWR
Trigger: CCTCCAAGTCCCAGAACCCCAAGAATGGGCAAGAAG...GCATCCAGGAATTAGCTGAGCCAACAGACCATGTGGACAGCTTTGGCCAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp GCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGCTCTGGCCAACCTTCTaGGACAGAGGGGGAATCAGC +
Preference number: 2 (lower is better)
Translates to: AGLVRPLPFPGVQYTRYVLWPTF*DRGGIS
Trigger: GCTGATTCCCCCTCTGTCCCAGAAGGTTGGCCAGAG...CACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp TCCTTCCGCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGACCCGACTGGAAGGGTaGGGGTTAAAGGGTAACTGG +
Preference number: 2 (lower is better)
Translates to: SFRRVGSTSSFSWGSIHKTRLEG*GLKGNW
Trigger: CCAGTTACCCTTTAACCCCCACCCTTCCAGTCGGGT...CTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGCGGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp AAGAGGTGCTGTTTGAACTCCCACAGCTACAAAGCAGCAGAGCCGAGATCCAAAGAGCCAGAAATCCCTTaGGCATCCCAAGGCCAGGAG +
Preference number: 2 (lower is better)
Translates to: KRCCLNSHSYKAAEPRSKEPEIP*ASQGQE
Trigger: CTCCTGGCCTTGGGATGCCCAAGGGATTTCTGGCTC...TTTGGATCTCGGCTCTGCTGCTTTGTAGCTGTGGGAGTTCAAACAGCACCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR CAA 90 bp CTGTCCACATGGTCTGTTGGCTCAGCTAATTCCTGGATGCCATCATaGAAATCACCAGGTGACCATCCCCCAGAGAGCTGGGTCTATGCT +
Preference number: 2 (lower is better)
Translates to: LSTWSVGSANSWMPS*KSPGDHPPESWVYA
Trigger: AGCATAGACCCAGCTCTCTGGGGGATGGTCACCTGGTGATTTCAATGATGGCATCCAGGAATTAGCTGAGCCAACAGACCATGTGGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR TCA 90 bp TGTTTCCAAACCCTGGGGTCCATTCAATCCTCTTCCAGGCTTTGGCAGGAGGGCATGGACTTCAACACATaGCAGACAGCCAAGATCACG +
Preference number: 2 (lower is better)
Translates to: CFQTLGSIQSSSRLWQEGMDFNT*QTAKIT
Trigger: CGTGATCTTGGCTGTCTGTCATGTGTTGAAGTCCAT...GCCCTCCTGCCAAAGCCTGGAAGAGGATTGAATGGACCCCAGGGTTTGGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR TCA 90 bp TCCTTCCGCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGATTGAAATCACCAGGTaGCCATCCCCCAGAGAGCTG +
Preference number: 2 (lower is better)
Translates to: SFRRVGSTSSFSWGSIHKIEITR*PSPREL
Trigger: CAGCTCTCTGGGGGATGGTCACCTGGTGATTTCAAT...CTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGCGGAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR TCA 90 bp AAGAGGTGCTGTTTGAACTCCCACAGCTACAAAGCAGCAGAGCCGAGATCCAAAAATTTGGAACTAGCCTaGGCCAGGTGGCTGGGTCAC +
Preference number: 2 (lower is better)
Translates to: KRCCLNSHSYKAAEPRSKNLELA*ARWLGH
Trigger: GTGACCCAGCCACCTGGCTCAGGCTAGTTCCAAATT...TTTGGATCTCGGCTCTGCTGCTTTGTAGCTGTGGGAGTTCAAACAGCACCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR GCA 90 bp CCGGGACGCACTCACAAAGACAAGAATACTGAACACCGGAAGGACTCATTATTAGAACTGGGTTGGCTGTaGTCATCACGGCGGCTCCCT +
Preference number: 2 (lower is better)
Translates to: PGRTHKDKNTEHRKDSLLELGWL*SSRRLP
Trigger: AGGGAGCCGCCGTGATGAGCACAGCCAACCCAGTTC...TAATAATGAGTCCTTCCGGTGTTCAGTATTCTTGTCTTTGTGAGTGCGTCCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR GCA 90 bp CCCATCAGTGGTGAGAGGCCACGAGACTCAGCTATGCAGGGTCAGGGCAGGAAGCCTCAGTTTCAAGATTaGACGTTTCACATTTCTCAG +
Preference number: 2 (lower is better)
Translates to: PISGERPRDSAMQGQGRKPQFQD*TFHISQ
Trigger: CTGAGAAATGTGAAACGTGCAATCTTGAAACTGAGG...CTTCCTGCCCTGACCCTGCATAGCTGAGTCTCGTGGCCTCTCACCACTGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR CCA 90 bp CCGGGACGCACTCACAAAGACAAGAATACTGAACACCGGAAGGACTCATTATTACACGGCGGCTCCCTGTaGGACAAGAAAGCGCGTAGA +
Preference number: 2 (lower is better)
Translates to: PGRTHKDKNTEHRKDSLLHGGSL*DKKARR
Trigger: TCTACGCGCTTTCTTGTCCCACAGGGAGCCGCCGTG...TAATAATGAGTCCTTCCGGTGTTCAGTATTCTTGTCTTTGTGAGTGCGTCCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR CCA 90 bp GAGGTGCTGTTTGAACTCCCACAGCTACAAAGCAGCAGAGCCGAGATCCAAACTCTTCTTGCCCATTCTTaGGGTTCTGGGACTTGGAGG +
Preference number: 2 (lower is better)
Translates to: EVLFELPQLQSSRAEIQTLLAHS*GSGTWR
Trigger: CCTCCAAGTCCCAGAACCCCAAGAATGGGCAAGAAG...AGTTTGGATCTCGGCTCTGCTGCTTTGTAGCTGTGGGAGTTCAAACAGCACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR CCA 90 bp GCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGCTCAGCTGAGAACATaGCCAAGTCAGTCCCAGCCA +
Preference number: 2 (lower is better)
Translates to: AGLVRPLPFPGVQYTRYVAQLRT*PSQSQP
Trigger: TGGCTGGGACTGACTTGGCCATGTTCTCAGCTGAGC...CACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp TCCTTCCGCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGAGTGCTTATGAGAGGTaGTGGGGAGGGGTGTCATCT +
Preference number: 2 (lower is better)
Translates to: SFRRVGSTSSFSWGSIHKSAYER*WGGVSS
Trigger: AGATGACACCCCTCCCCACCACCTCTCATAAGCACT...CTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGCGGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp CCGGGACGCACTCACAAAGACAAGAATACTGAACACCGGAAGGACTCATTATTACTCAGAAAGCCGGGATaGGGGCGGTCACTAAAGGGG +
Preference number: 2 (lower is better)
Translates to: PGRTHKDKNTEHRKDSLLLRKPG*GRSLKG
Trigger: CCCCTTTAGTGACCGCCCCCATCCCGGCTTTCTGAG...TAATAATGAGTCCTTCCGGTGTTCAGTATTCTTGTCTTTGTGAGTGCGTCCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR CCA 90 bp AAGAGGTGCTGTTTGAACTCCCACAGCTACAAAGCAGCAGAGCCGAGATCCAAAACCCGACTGGAAGGGTaGGGGTTAAAGGGTAACTGG +
Preference number: 2 (lower is better)
Translates to: KRCCLNSHSYKAAEPRSKTRLEG*GLKGNW
Trigger: CCAGTTACCCTTTAACCCCCACCCTTCCAGTCGGGT...TTTGGATCTCGGCTCTGCTGCTTTGTAGCTGTGGGAGTTCAAACAGCACCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR CCA 90 bp GGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGATTGCCACACGGGAGCTCTaGCCAAAGCTGTCCACATGG +
Preference number: 2 (lower is better)
Translates to: GWFDLFLFLGFNTQGMWIATREL*PKLSTW
Trigger: CCATGTGGACAGCTTTGGCCAGAGCTCCCGTGTGGC...AATCCACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR TCA 90 bp AGCTCTGGCCAAAGCTGTCCACATGGTCTGTTGGCTCAGCTAATTCCTGGATGCATGGACTTCAACACATaGCAGACAGCCAAGATCACG +
Preference number: 2 (lower is better)
Translates to: SSGQSCPHGLLAQLIPGCMDFNT*QTAKIT
Trigger: CGTGATCTTGGCTGTCTGTCATGTGTTGAAGTCCAT...GCATCCAGGAATTAGCTGAGCCAACAGACCATGTGGACAGCTTTGGCCAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR GCA 90 bp TCCTTCCGCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGTCTATGCTGAGCTCCTaGAGTTTCACCTGTAGGACC +
Preference number: 2 (lower is better)
Translates to: SFRRVGSTSSFSWGSIHKSMLSS*SFTCRT
Trigger: GGTCCTACAGGTGAAACTGCAGGAGCTCAGCATAGA...CTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGCGGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp ACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAATCCCTCCAGGACAACAAACTCACGGCGGCTCCCTGTaGGACAAGAAAGCGCGTAGA +
Preference number: 2 (lower is better)
Translates to: TWRNSSLRCKKIPPGQQTHGGSL*DKKARR
Trigger: TCTACGCGCTTTCTTGTCCCACAGGGAGCCGCCGTG...AGTTTGTTGTCCTGGAGGGATTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp TCCTTCCGCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGAGCAGACTGAGGCATTaGGTCTCGATAAGACTGCAC +
Preference number: 2 (lower is better)
Translates to: SFRRVGSTSSFSWGSIHKSRLRH*VSIRLH
Trigger: GTGCAGTCTTATCGAGACCCAATGCCTCAGTCTGCT...CTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGCGGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp GCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGAGTGCTTATGAGAGGTaGTGGGGAGGGGTGTCATCT +
Preference number: 2 (lower is better)
Translates to: AGLVRPLPFPGVQYTRYVSAYER*WGGVSS
Trigger: AGATGACACCCCTCCCCACCACCTCTCATAAGCACT...CACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp GGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGATTCTCTGGCCAACCTTCTaGGACAGAGGGGGAATCAGC +
Preference number: 2 (lower is better)
Translates to: GWFDLFLFLGFNTQGMWILWPTF*DRGGIS
Trigger: GCTGATTCCCCCTCTGTCCCAGAAGGTTGGCCAGAG...AATCCACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp GGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGATTCTGGGTCACACCCTCTaGCCAACCTTCTGGGACAGA +
Preference number: 2 (lower is better)
Translates to: GWFDLFLFLGFNTQGMWILGHTL*PTFWDR
Trigger: TCTGTCCCAGAAGGTTGGCCAGAGGGTGTGACCCAG...AATCCACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp TACGTCTCTAAAACCTACGTGAGGGGCTCAAATGCTGTAGGTTGTTTCCAAACCCTGGGTCACACCCTCTaGCCAACCTTCTGGGACAGA +
Preference number: 2 (lower is better)
Translates to: YVSKTYVRGSNAVGCFQTLGHTL*PTFWDR
Trigger: TCTGTCCCAGAAGGTTGGCCAGAGGGTGTGACCCAG...GGTTTGGAAACAACCTACAGCATTTGAGCCCCTCACGTAGGTTTTAGAGACGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR CCA 90 bp TACGTCTCTAAAACCTACGTGAGGGGCTCAAATGCTGTAGGTTGTTTCCAAACCGAGCCAGAAATCCCTTaGGCATCCCAAGGCCAGGAG +
Preference number: 2 (lower is better)
Translates to: YVSKTYVRGSNAVGCFQTEPEIP*ASQGQE
Trigger: CTCCTGGCCTTGGGATGCCCAAGGGATTTCTGGCTC...GGTTTGGAAACAACCTACAGCATTTGAGCCCCTCACGTAGGTTTTAGAGACGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR CAA 90 bp TCTCTGGGTAAAAGAGAGGGAGACGAAGGTTTACAAGCCAATCTTTaGGAATTTGGAACTAGCCTGAGCCAGGTGGCTGGGTCACTGTGG +
Preference number: 2 (lower is better)
Translates to: SLGKREGDEGLQANL*EFGTSLSQVAGSLW
Trigger: CCACAGTGACCCAGCCACCTGGCTCAGGCTAGTTCCAAATTCCAAAAGATTGGCTTGTAAACCTTCGTCTCCCTCTCTTTTACCCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR TCA 90 bp AAGAGGTGCTGTTTGAACTCCCACAGCTACAAAGCAGCAGAGCCGAGATCCAAATACACCGGCTCCTTCTaGGCCAGGGCAAACAAAAAT +
Preference number: 2 (lower is better)
Translates to: KRCCLNSHSYKAAEPRSKYTGSF*ARANKN
Trigger: ATTTTTGTTTGCCCTGGCTCAGAAGGAGCCGGTGTA...TTTGGATCTCGGCTCTGCTGCTTTGTAGCTGTGGGAGTTCAAACAGCACCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR GCA 90 bp TCCTTCCGCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTGTGCACACGTATGTaGTGTCTCTGGGTAAAAGAG +
Preference number: 2 (lower is better)
Translates to: SFRRVGSTSSFSWGSIHKVCTRM*CLWVKE
Trigger: CTCTTTTACCCAGAGACAGCACATACGTGTGCACAC...CTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGCGGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp GGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGATTTCTAGAAGGGAGAGATaGGTCCGGGTGGAGCAACAC +
Preference number: 2 (lower is better)
Translates to: GWFDLFLFLGFNTQGMWISRRER*VRVEQH
Trigger: GTGTTGCTCCACCCGGACCCATCTCTCCCTTCTAGA...AATCCACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp TACGTCTCTAAAACCTACGTGAGGGGCTCAAATGCTGTAGGTTGTTTCCAAACCTCTAGAAGGGAGAGATaGGTCCGGGTGGAGCAACAC +
Preference number: 2 (lower is better)
Translates to: YVSKTYVRGSNAVGCFQTSRRER*VRVEQH
Trigger: GTGTTGCTCCACCCGGACCCATCTCTCCCTTCTAGA...GGTTTGGAAACAACCTACAGCATTTGAGCCCCTCACGTAGGTTTTAGAGACGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR CCA 90 bp ACTTTACGGATGAGCAGACTGAGGCATTGGGTCTCGATAAGACTGCACTGTCAATGGGGTTCTGGGACTTaGAGGAACTCAAGTCTTCGC +
Preference number: 2 (lower is better)
Translates to: TLRMSRLRHWVSIRLHCQWGSGT*RNSSLR
Trigger: GCGAAGACTTGAGTTCCTCCAAGTCCCAGAACCCCA...TTGACAGTGCAGTCTTATCGAGACCCAATGCCTCAGTCTGCTCATCCGTAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp GCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGCTGCACCATCCCCCTaGCTGTCTTCAATTTATTCC +
Preference number: 2 (lower is better)
Translates to: AGLVRPLPFPGVQYTRYVAAPSP*LSSIYS
Trigger: GGAATAAATTGAAGACAGCCAGGGGGATGGTGCAGC...CACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp GCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGCGTATGTGCTGTCTCTaGGTAAAAGAGAGGGAGACG +
Preference number: 2 (lower is better)
Translates to: AGLVRPLPFPGVQYTRYVRMCCL*VKERET
Trigger: CGTCTCCCTCTCTTTTACCCAGAGACAGCACATACG...CACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR TCA 90 bp CCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTTTTACAGCCTGAGAGTTATAGTGAAGACTaGATAAATAGGGCTTGCGAC +
Preference number: 2 (lower is better)
Translates to: PVGPPGMGRMAQLLLQPESYSED*INRACD
Trigger: GTCGCAAGCCCTATTTATTCAGTCTTCACTATAACT...CTCAGGCTGTAAAAGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR TCA 90 bp CCGGGACGCACTCACAAAGACAAGAATACTGAACACCGGAAGGACTCATTATTAGCTACTTTTACAGCCTaGGCCAGAAATCCCTTGGGC +
Preference number: 2 (lower is better)
Translates to: PGRTHKDKNTEHRKDSLLATFTA*ARNPLG
Trigger: GCCCAAGGGATTTCTGGCTCAGGCTGTAAAAGTAGC...TAATAATGAGTCCTTCCGGTGTTCAGTATTCTTGTCTTTGTGAGTGCGTCCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR TCA 90 bp GGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGATTGCTACTTTTACAGCCTaGGCCAGAAATCCCTTGGGC +
Preference number: 2 (lower is better)
Translates to: GWFDLFLFLGFNTQGMWIATFTA*ARNPLG
Trigger: GCCCAAGGGATTTCTGGCTCAGGCTGTAAAAGTAGC...AATCCACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR TCA 90 bp GGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGATTATTGAAATCACCAGGTaGCCATCCCCCAGAGAGCTG +
Preference number: 2 (lower is better)
Translates to: GWFDLFLFLGFNTQGMWIIEITR*PSPREL
Trigger: CAGCTCTCTGGGGGATGGTCACCTGGTGATTTCAAT...AATCCACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR GCA 90 bp AAGAGGTGCTGTTTGAACTCCCACAGCTACAAAGCAGCAGAGCCGAGATCCAAAGTGGATTCTCCAGGTTaGCAGGCTAAAGCTAAAGCT +
Preference number: 2 (lower is better)
Translates to: KRCCLNSHSYKAAEPRSKVDSPG*QAKAKA
Trigger: AGCTTTAGCTTTAGCCTGGCAACCTGGAGAATCCAC...TTTGGATCTCGGCTCTGCTGCTTTGTAGCTGTGGGAGTTCAAACAGCACCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR CCA 90 bp TACGTCTCTAAAACCTACGTGAGGGGCTCAAATGCTGTAGGTTGTTTCCAAACCCTTCTTGCCCATTCTTaGGGTTCTGGGACTTGGAGG +
Preference number: 2 (lower is better)
Translates to: YVSKTYVRGSNAVGCFQTLLAHS*GSGTWR
Trigger: CCTCCAAGTCCCAGAACCCCAAGAATGGGCAAGAAG...GGTTTGGAAACAACCTACAGCATTTGAGCCCCTCACGTAGGTTTTAGAGACGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR CCA 90 bp CCGGGACGCACTCACAAAGACAAGAATACTGAACACCGGAAGGACTCATTATTAGGGTTAAAGGGTAACTaGGTCACACCCTCTGGCCAA +
Preference number: 2 (lower is better)
Translates to: PGRTHKDKNTEHRKDSLLGLKGN*VTPSGQ
Trigger: TTGGCCAGAGGGTGTGACCCAGTTACCCTTTAACCC...TAATAATGAGTCCTTCCGGTGTTCAGTATTCTTGTCTTTGTGAGTGCGTCCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR TCA 90 bp CCGGGACGCACTCACAAAGACAAGAATACTGAACACCGGAAGGACTCATTATTACAAGGCCAGGAGTCATaGACATTAGCGTCTCAACTC +
Preference number: 2 (lower is better)
Translates to: PGRTHKDKNTEHRKDSLLQGQES*TLASQL
Trigger: GAGTTGAGACGCTAATGTTCATGACTCCTGGCCTTG...TAATAATGAGTCCTTCCGGTGTTCAGTATTCTTGTCTTTGTGAGTGCGTCCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR GCA 90 bp GGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGATTTCTATGCTGAGCTCCTaGAGTTTCACCTGTAGGACC +
Preference number: 2 (lower is better)
Translates to: GWFDLFLFLGFNTQGMWISMLSS*SFTCRT
Trigger: GGTCCTACAGGTGAAACTGCAGGAGCTCAGCATAGA...AATCCACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp CCGGGACGCACTCACAAAGACAAGAATACTGAACACCGGAAGGACTCATTATTACAGGAATGGGCAGGATaGCTCAGCTACTTTTACAGC +
Preference number: 2 (lower is better)
Translates to: PGRTHKDKNTEHRKDSLLQEWAG*LSYFYS
Trigger: GCTGTAAAAGTAGCTGAGCCATCCTGCCCATTCCTG...TAATAATGAGTCCTTCCGGTGTTCAGTATTCTTGTCTTTGTGAGTGCGTCCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR CCA 90 bp GGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGATTCGTATGTGCTGTCTCTaGGTAAAAGAGAGGGAGACG +
Preference number: 2 (lower is better)
Translates to: GWFDLFLFLGFNTQGMWIRMCCL*VKERET
Trigger: CGTCTCCCTCTCTTTTACCCAGAGACAGCACATACG...AATCCACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR CAA 90 bp GAACTCCCACAGCTACAAAGCAGCAGAGCCGAGATCCAAACTCAGTaGTCTATATGGAATTTTATCTCAACCTTACACCGGCTCCTTCTG +
Preference number: 2 (lower is better)
Translates to: ELPQLQSSRAEIQTQ*SIWNFISTLHRLLL
Trigger: CAGAAGGAGCCGGTGTAAGGTTGAGATAAAATTCCATATAGACAACTGAGTTTGGATCTCGGCTCTGCTGCTTTGTAGCTGTGGGAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR TCA 90 bp GGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGATTATGGACTTCAACACATaGCAGACAGCCAAGATCACG +
Preference number: 2 (lower is better)
Translates to: GWFDLFLFLGFNTQGMWIMDFNT*QTAKIT
Trigger: CGTGATCTTGGCTGTCTGTCATGTGTTGAAGTCCAT...AATCCACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR TCA 90 bp CCGGGACGCACTCACAAAGACAAGAATACTGAACACCGGAAGGACTCATTATTAATGGACTTCAACACATaGCAGACAGCCAAGATCACG +
Preference number: 2 (lower is better)
Translates to: PGRTHKDKNTEHRKDSLLMDFNT*QTAKIT
Trigger: CGTGATCTTGGCTGTCTGTCATGTGTTGAAGTCCAT...TAATAATGAGTCCTTCCGGTGTTCAGTATTCTTGTCTTTGTGAGTGCGTCCCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR TCA 90 bp AAGAGGTGCTGTTTGAACTCCCACAGCTACAAAGCAGCAGAGCCGAGATCCAAACAAAGACAAGAATACTaGACACCGGAAGGACTCATT +
Preference number: 2 (lower is better)
Translates to: KRCCLNSHSYKAAEPRSKQRQEY*TPEGLI
Trigger: AATGAGTCCTTCCGGTGTTCAGTATTCTTGTCTTTG...TTTGGATCTCGGCTCTGCTGCTTTGTAGCTGTGGGAGTTCAAACAGCACCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR TCA 90 bp AAGAGGTGCTGTTTGAACTCCCACAGCTACAAAGCAGCAGAGCCGAGATCCAAAAGTTATAGTGAAGACTaGATAAATAGGGCTTGCGAC +
Preference number: 2 (lower is better)
Translates to: KRCCLNSHSYKAAEPRSKSYSED*INRACD
Trigger: GTCGCAAGCCCTATTTATTCAGTCTTCACTATAACT...TTTGGATCTCGGCTCTGCTGCTTTGTAGCTGTGGGAGTTCAAACAGCACCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR GCA 90 bp AAGAGGTGCTGTTTGAACTCCCACAGCTACAAAGCAGCAGAGCCGAGATCCAAACCTCAGTTTCAAGATTaGACGTTTCACATTTCTCAG +
Preference number: 2 (lower is better)
Translates to: KRCCLNSHSYKAAEPRSKPQFQD*TFHISQ
Trigger: CTGAGAAATGTGAAACGTGCAATCTTGAAACTGAGG...TTTGGATCTCGGCTCTGCTGCTTTGTAGCTGTGGGAGTTCAAACAGCACCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR CAA 90 bp TTCACAGCTGCACCATCCCCCTGGCTGTCTTCAATTTATTCCAGTTaGATCCCAGTAGGGTTTGAGAGCAGAAATGGAAGATTTCTTCTT +
Preference number: 2 (lower is better)
Translates to: FTAAPSPWLSSIYSS*IPVGFESRNGRFLL
Trigger: AAGAAGAAATCTTCCATTTCTGCTCTCAAACCCTACTGGGATCAAACTGGAATAAATTGAAGACAGCCAGGGGGATGGTGCAGCTGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR GCA 90 bp ACTTTACGGATGAGCAGACTGAGGCATTGGGTCTCGATAAGACTGCACTGTCAACCTCAGTTTCAAGATTaGACGTTTCACATTTCTCAG +
Preference number: 2 (lower is better)
Translates to: TLRMSRLRHWVSIRLHCQPQFQD*TFHISQ
Trigger: CTGAGAAATGTGAAACGTGCAATCTTGAAACTGAGG...TTGACAGTGCAGTCTTATCGAGACCCAATGCCTCAGTCTGCTCATCCGTAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp GGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGATTGGCTCAGCTAATTCCTaGATGCCATCATTGAAATCA +
Preference number: 2 (lower is better)
Translates to: GWFDLFLFLGFNTQGMWIGSANS*MPSLKS
Trigger: TGATTTCAATGATGGCATCCAGGAATTAGCTGAGCC...AATCCACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CCA 90 bp CCGGGACGCACTCACAAAGACAAGAATACTGAACACCGGAAGGACTCATTATTACAACTATATACAAAATaGGGCCTGTTTCCTTCCCAG +
Preference number: 2 (lower is better)
Translates to: PGRTHKDKNTEHRKDSLLQLYTK*GLFPSQ
Trigger: CTGGGAAGGAAACAGGCCCCATTTTGTATATAGTTG...TAATAATGAGTCCTTCCGGTGTTCAGTATTCTTGTCTTTGTGAGTGCGTCCCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR TCA 90 bp GGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGATTAGTTATAGTGAAGACTaGATAAATAGGGCTTGCGAC +
Preference number: 2 (lower is better)
Translates to: GWFDLFLFLGFNTQGMWISYSED*INRACD
Trigger: GTCGCAAGCCCTATTTATTCAGTCTTCACTATAACT...AATCCACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR TCA 90 bp TACGTCTCTAAAACCTACGTGAGGGGCTCAAATGCTGTAGGTTGTTTCCAAACCAGTTATAGTGAAGACTaGATAAATAGGGCTTGCGAC +
Preference number: 2 (lower is better)
Translates to: YVSKTYVRGSNAVGCFQTSYSED*INRACD
Trigger: GTCGCAAGCCCTATTTATTCAGTCTTCACTATAACT...GGTTTGGAAACAACCTACAGCATTTGAGCCCCTCACGTAGGTTTTAGAGACGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR GCA 90 bp GGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGATTCCTCAGTTTCAAGATTaGACGTTTCACATTTCTCAG +
Preference number: 2 (lower is better)
Translates to: GWFDLFLFLGFNTQGMWIPQFQD*TFHISQ
Trigger: CTGAGAAATGTGAAACGTGCAATCTTGAAACTGAGG...AATCCACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR GCA 72 bp CCTGAGCCAGGTGGCTGGGTCACTGTGGCTCCCAGATaGCACACGGGAGCTCTGGCCAAAGCTGTCCACATG +
Preference number: 3 (lower is better)
Translates to: PEPGGWVTVAPR*HTGALAKAVHM
Trigger: CATGTGGACAGCTTTGGCCAGAGCTCCCGTGTGGCATCTGGGAGCCACAGTGACCCAGCCACCTGGCTCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR GCA 72 bp GCAGGCTGGACTTACCACAGCGGGGTCACAGAAGGCTaGACTACCAGCCGCGTGGCTCAGCTGAGAACATGG +
Preference number: 3 (lower is better)
Translates to: AGWTYHSGVTEG*TTSRVAQLRTW
Trigger: CCATGTTCTCAGCTGAGCCACGCGGCTGGTAGTGCAGCCTTCTGTGACCCCGCTGTGGTAAGTCCAGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CAA 90 bp TCCTGCAGTTTCACCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTGCTTGCGACATCTGCTaGCCCTGGGCCCGGTCAGGC +
Preference number: 3 (lower is better)
Translates to: SCSFTCRTSRNGQDGSATACDIC*PWARSG
Trigger: GCCTGACCGGGCCCAGGGCAAGCAGATGTCGCAAGC...AGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGGTGAAACTGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CAA 90 bp CCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTTTTACAGCCTGAGGCTTGCGACATCTGCTaGCCCTGGGCCCGGTCAGGC +
Preference number: 3 (lower is better)
Translates to: PVGPPGMGRMAQLLLQPEACDIC*PWARSG
Trigger: GCCTGACCGGGCCCAGGGCAAGCAGATGTCGCAAGC...CTCAGGCTGTAAAAGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CAA 90 bp TGGGCCCGGTCAGGCCCTCACACCCGACTGGAAGGGTGGGGGTTAAAGGGTAACGAGCAGACTGAGGCATaGGGTCTCGATAAGACTGCA +
Preference number: 3 (lower is better)
Translates to: WARSGPHTRLEGWGLKGNEQTEA*GLDKTA
Trigger: TGCAGTCTTATCGAGACCCAATGCCTCAGTCTGCTC...GTTACCCTTTAACCCCCACCCTTCCAGTCGGGTGTGAGGGCCTGACCGGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR TCA 72 bp TCACAGAAGGCTGCACTACCAGCCGCGTGGCTCAGCTaGGAACATGGCCAAGTCAGTCCCAGCCAGAAGGCT +
Preference number: 3 (lower is better)
Translates to: SQKAALPAAWLS*EHGQVSPSQKA
Trigger: AGCCTTCTGGCTGGGACTGACTTGGCCATGTTCTCAGCTGAGCCACGCGGCTGGTAGTGCAGCCTTCTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR CCA 72 bp CACACCCGACTGGAAGGGTGGGGGTTAAAGGGTAACTaGGTCACACCCTCTGGCCAACCTTCTGGGACAGAG +
Preference number: 3 (lower is better)
Translates to: HTRLEGWGLKGN*VTPSGQPSGTE
Trigger: CTCTGTCCCAGAAGGTTGGCCAGAGGGTGTGACCCAGTTACCCTTTAACCCCCACCCTTCCAGTCGGGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR TCA 72 bp GCCGACGCGGGGCCCAAGTCTCAAAGAGGTGCTGTTTaGACTCCCACAGCTACAAAGCAGCAGAGCCGAGAT +
Preference number: 3 (lower is better)
Translates to: ADAGPKSQRGAV*TPTATKQQSRD
Trigger: ATCTCGGCTCTGCTGCTTTGTAGCTGTGGGAGTTCAAACAGCACCTCTTTGAGACTTGGGCCCCGCGTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR GCA 72 bp TTGAATCCACACAGTCACCCTGGCAGGGACTATTCCTaGCCCATTGTGCCGACGCGGGGCCCAAGTCTCAAA +
Preference number: 3 (lower is better)
Translates to: LNPHSHPGRDYS*PIVPTRGPSLK
Trigger: TTTGAGACTTGGGCCCCGCGTCGGCACAATGGGGCAGGAATAGTCCCTGCCAGGGTGACTGTGTGGATTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR CCA 72 bp AGTGCTTCCAACCTCCTTGAATCCACACAGTCACCCTaGCAGGGACTATTCCTGCCCCATTGTGCCGACGCG +
Preference number: 3 (lower is better)
Translates to: SASNLLESTQSP*QGLFLPHCADA
Trigger: CGCGTCGGCACAATGGGGCAGGAATAGTCCCTGCCAGGGTGACTGTGTGGATTCAAGGAGGTTGGAAGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR TCA 72 bp CAGTGCCAAGCGTGGGCTCAGTGCTTCCAACCTCCTTaGATCCACACAGTCACCCTGGCAGGGACTATTCCT +
Preference number: 3 (lower is better)
Translates to: QCQAWAQCFQPP*IHTVTLAGTIP
Trigger: AGGAATAGTCCCTGCCAGGGTGACTGTGTGGATTCAAGGAGGTTGGAAGCACTGAGCCCACGCTTGGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR GCA 72 bp CTGGGACAGAGGGGGAATCAGCCCGAGCTTCACAGCTaGACCATCCCCCTGGCTGTCTTCAATTTATTCCAG +
Preference number: 3 (lower is better)
Translates to: LGQRGNQPELHS*TIPLAVFNLFQ
Trigger: CTGGAATAAATTGAAGACAGCCAGGGGGATGGTGCAGCTGTGAAGCTCGGGCTGATTCCCCCTCTGTCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR GCA 72 bp CCATTGTGCCGACGCGGGGCCCAAGTCTCAAAGAGGTaGTGTTTGAACTCCCACAGCTACAAAGCAGCAGAG +
Preference number: 3 (lower is better)
Translates to: PLCRRGAQVSKR*CLNSHSYKAAE
Trigger: CTCTGCTGCTTTGTAGCTGTGGGAGTTCAAACAGCACCTCTTTGAGACTTGGGCCCCGCGTCGGCACAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR CCA 72 bp ACAGGCGTCCACAGCGAGATGTTGCTTAGTGCTAGCTaGAGGGGCAAGCTCAGGTCTAGAAGGGAGAGATGG +
Preference number: 3 (lower is better)
Translates to: TGVHSEMLLSAS*RGKLRSRRERW
Trigger: CCATCTCTCCCTTCTAGACCTGAGCTTGCCCCTCCAGCTAGCACTAAGCAACATCTCGCTGTGGACGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CAA 90 bp GGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGATTGCTTGCGACATCTGCTaGCCCTGGGCCCGGTCAGGC +
Preference number: 3 (lower is better)
Translates to: GWFDLFLFLGFNTQGMWIACDIC*PWARSG
Trigger: GCCTGACCGGGCCCAGGGCAAGCAGATGTCGCAAGC...AATCCACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR TCA 72 bp AGGAATGGGCAGGATGGCTCAGCTACTTTTACAGCCTaGGCCAGAAATCCCTTGGGCATCCCAAGGCCAGGA +
Preference number: 3 (lower is better)
Translates to: RNGQDGSATFTA*ARNPLGIPRPG
Trigger: TCCTGGCCTTGGGATGCCCAAGGGATTTCTGGCTCAGGCTGTAAAAGTAGCTGAGCCATCCTGCCCATTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR CCA 72 bp GATGCCACACGGGAGCTCTGGCCAAAGCTGTCCACATaGTCTGTTGGCTCAGCTAATTCCTGGATGCCATCA +
Preference number: 3 (lower is better)
Translates to: DATRELWPKLST*SVGSANSWMPS
Trigger: TGATGGCATCCAGGAATTAGCTGAGCCAACAGACCATGTGGACAGCTTTGGCCAGAGCTCCCGTGTGGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CAA 90 bp TCCTGCAGTTTCACCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTGAGCAGACTGAGGCATaGGGTCTCGATAAGACTGCA +
Preference number: 3 (lower is better)
Translates to: SCSFTCRTSRNGQDGSATEQTEA*GLDKTA
Trigger: TGCAGTCTTATCGAGACCCAATGCCTCAGTCTGCTC...AGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGGTGAAACTGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR TCA 72 bp GGTCTGTTGGCTCAGCTAATTCCTGGATGCCATCATTaGAATCACCAGGTGACCATCCCCCAGAGAGCTGGG +
Preference number: 3 (lower is better)
Translates to: GLLAQLIPGCHH*NHQVTIPQRAG
Trigger: CCCAGCTCTCTGGGGGATGGTCACCTGGTGATTTCAATGATGGCATCCAGGAATTAGCTGAGCCAACAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR TCA 72 bp GGCGGCCCCGGGACGCACTCACAAAGACAAGAATACTaGACACCGGAAGGACTCATTATTACCCAGAAATCT +
Preference number: 3 (lower is better)
Translates to: GGPGTHSQRQEY*TPEGLIITQKS
Trigger: AGATTTCTGGGTAATAATGAGTCCTTCCGGTGTTCAGTATTCTTGTCTTTGTGAGTGCGTCCCGGGGCCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR CCA 72 bp GGAATCAGCCCGAGCTTCACAGCTGCACCATCCCCCTaGCTGTCTTCAATTTATTCCAGTTTGATCCCAGTA +
Preference number: 3 (lower is better)
Translates to: GISPSFTAAPSP*LSSIYSSLIPV
Trigger: TACTGGGATCAAACTGGAATAAATTGAAGACAGCCAGGGGGATGGTGCAGCTGTGAAGCTCGGGCTGATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CAA 90 bp TCCTTCCGCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGTCCTGGATGCCATCATaGAAATCACCAGGTGACCAT +
Preference number: 3 (lower is better)
Translates to: SFRRVGSTSSFSWGSIHKSWMPS*KSPGDH
Trigger: ATGGTCACCTGGTGATTTCAATGATGGCATCCAGGA...CTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGCGGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR TCA 72 bp GCCTGTTTCCTTCCCAGCAGTCTTAAAATAAACTCCTaGAACCATGCTCCTTCCGCAGGGTTGGTTCGACCT +
Preference number: 3 (lower is better)
Translates to: ACFLPSSLKINS*NHAPSAGLVRP
Trigger: AGGTCGAACCAACCCTGCGGAAGGAGCATGGTTTCAGGAGTTTATTTTAAGACTGCTGGGAAGGAAACAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR CCA 72 bp AAGCTGTCCACATGGTCTGTTGGCTCAGCTAATTCCTaGATGCCATCATTGAAATCACCAGGTGACCATCCC +
Preference number: 3 (lower is better)
Translates to: KLSTWSVGSANS*MPSLKSPGDHP
Trigger: GGGATGGTCACCTGGTGATTTCAATGATGGCATCCAGGAATTAGCTGAGCCAACAGACCATGTGGACAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CAA 90 bp TACGTCTCTAAAACCTACGTGAGGGGCTCAAATGCTGTAGGTTGTTTCCAAACCGAGCAGACTGAGGCATaGGGTCTCGATAAGACTGCA +
Preference number: 3 (lower is better)
Translates to: YVSKTYVRGSNAVGCFQTEQTEA*GLDKTA
Trigger: TGCAGTCTTATCGAGACCCAATGCCTCAGTCTGCTC...GGTTTGGAAACAACCTACAGCATTTGAGCCCCTCACGTAGGTTTTAGAGACGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR CAA 90 bp CCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTTTTACAGCCTGAGTCAATTTATTCCAGTTaGATCCCAGTAGGGTTTGAG +
Preference number: 3 (lower is better)
Translates to: PVGPPGMGRMAQLLLQPESIYSS*IPVGFE
Trigger: CTCAAACCCTACTGGGATCAAACTGGAATAAATTGA...CTCAGGCTGTAAAAGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CAA 90 bp TGTTTCCAAACCCTGGGGTCCATTCAATCCTCTTCCAGGCTTTGGCAGGAGGGCTTACAAGCCAATCTTTaGGAATTTGGAACTAGCCTG +
Preference number: 3 (lower is better)
Translates to: CFQTLGSIQSSSRLWQEGLQANL*EFGTSL
Trigger: CAGGCTAGTTCCAAATTCCAAAAGATTGGCTTGTAA...GCCCTCCTGCCAAAGCCTGGAAGAGGATTGAATGGACCCCAGGGTTTGGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR CAA 90 bp GGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGATTTGTCCACATGGTCTGTaGGCTCAGCTAATTCCTGGA +
Preference number: 3 (lower is better)
Translates to: GWFDLFLFLGFNTQGMWICPHGL*AQLIPG
Trigger: TCCAGGAATTAGCTGAGCCAACAGACCATGTGGACA...AATCCACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CAA 90 bp GAGGTGCTGTTTGAACTCCCACAGCTACAAAGCAGCAGAGCCGAGATCCAAACTCAGGGCAAACAAAAATaGTACGTCTCTAAAACCTAC +
Preference number: 3 (lower is better)
Translates to: EVLFELPQLQSSRAEIQTQGKQK*YVSKTY
Trigger: GTAGGTTTTAGAGACGTACAATTTTTGTTTGCCCTG...AGTTTGGATCTCGGCTCTGCTGCTTTGTAGCTGTGGGAGTTCAAACAGCACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR CAA 90 bp GCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGTTACAAGCCAATCTTTaGGAATTTGGAACTAGCCTG +
Preference number: 3 (lower is better)
Translates to: AGLVRPLPFPGVQYTRYVLQANL*EFGTSL
Trigger: CAGGCTAGTTCCAAATTCCAAAAGATTGGCTTGTAA...CACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CAA 90 bp GCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGAGCTATACATCTTCCTaGGCCTTATTCCCTTATTTC +
Preference number: 3 (lower is better)
Translates to: AGLVRPLPFPGVQYTRYVSYTSS*ALFPYF
Trigger: GAAATAAGGGAATAAGGCCAAGGAAGATGTATAGCT...CACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR-3UTR CAA 90 bp AAGAGGTGCTGTTTGAACTCCCACAGCTACAAAGCAGCAGAGCCGAGATCCAAACAGGGCAAACAAAAATaGTACGTCTCTAAAACCTAC +
Preference number: 3 (lower is better)
Translates to: KRCCLNSHSYKAAEPRSKQGKQK*YVSKTY
Trigger: GTAGGTTTTAGAGACGTACAATTTTTGTTTGCCCTG...TTTGGATCTCGGCTCTGCTGCTTTGTAGCTGTGGGAGTTCAAACAGCACCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR CCA 72 bp CTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTaGATTCTCCAGGTTGCCAGGCTAAAGCTAAAGCTA +
Preference number: 3 (lower is better)
Translates to: LFLFLGFNTQGM*ILQVARLKLKL
Trigger: TAGCTTTAGCTTTAGCCTGGCAACCTGGAGAATCCACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR CCA 72 bp AGCAGCAGAGCCGAGATCCAAACTCAGTTGTCTATATaGAATTTTATCTCAACCTTACACCGGCTCCTTCTG +
Preference number: 3 (lower is better)
Translates to: SSRAEIQTQLSI*NFISTLHRLLL
Trigger: CAGAAGGAGCCGGTGTAAGGTTGAGATAAAATTCCATATAGACAACTGAGTTTGGATCTCGGCTCTGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR CCA 72 bp AAACTGTTAAACCTCAGACTTCACAAGACCCAACCATaGACTTCAACACATGACAGACAGCCAAGATCACGT +
Preference number: 3 (lower is better)
Translates to: KLLNLRLHKTQP*TSTHDRQPRSR
Trigger: ACGTGATCTTGGCTGTCTGTCATGTGTTGAAGTCCATGGTTGGGTCTTGTGAAGTCTGAGGTTTAACAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR CCA 72 bp GCACCCACTATAAACCAGCACTTGACATCAGTCATCTaGCAAGGATATTACAGGACAAGCATTAGATGTCTG +
Preference number: 3 (lower is better)
Translates to: APTINQHLTSVI*QGYYRTSIRCL
Trigger: CAGACATCTAATGCTTGTCCTGTAATATCCTTGCCAGATGACTGATGTCAAGTGCTGGTTTATAGTGGGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR-3UTR CAA 90 bp TACGTCTCTAAAACCTACGTGAGGGGCTCAAATGCTGTAGGTTGTTTCCAAACCTCAATTTATTCCAGTTaGATCCCAGTAGGGTTTGAG +
Preference number: 3 (lower is better)
Translates to: YVSKTYVRGSNAVGCFQTSIYSS*IPVGFE
Trigger: CTCAAACCCTACTGGGATCAAACTGGAATAAATTGA...GGTTTGGAAACAACCTACAGCATTTGAGCCCCTCACGTAGGTTTTAGAGACGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
3UTR TCA 72 bp TATGGAATTTTATCTCAACCTTACACCGGCTCCTTCTaGGCCAGGGCAAACAAAAATTGTACGTCTCTAAAA +
Preference number: 3 (lower is better)
Translates to: YGILSQPYTGSF*ARANKNCTSLK
Trigger: TTTTAGAGACGTACAATTTTTGTTTGCCCTGGCTCAGAAGGAGCCGGTGTAAGGTTGAGATAAAATTCCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR GCA 90 bp TGGGCCCGGTCAGGCCCTCACACCCGACTGGAAGGGTGGGGGTTAAAGGGTAACCTTGCGACATCTGCTTaGCCTGGGCCCGGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: WARSGPHTRLEGWGLKGNLATSA*PGPGQA
Trigger: GGCCTGACCGGGCCCAGGGCAAGCAGATGTCGCAAG...GTTACCCTTTAACCCCCACCCTTCCAGTCGGGTGTGAGGGCCTGACCGGGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp GAGGGCAGGCAGGCCCCGAGGCGGCCCCGGGACGCACTCACAAAGACAAGAATACTGCCCAGGAAGTGCTaGAGAGCCAAGGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: EGRQAPRRPRDALTKTRILPRKC*RAKEGW
Trigger: CCACCCCTCCTTGGCTCTCCAGCACTTCCTGGGCAG...TATTCTTGTCTTTGTGAGTGCGTCCCGGGGCCGCCTCGGGGCCTGCCTGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR CCA 90 bp TGGGCCCGGTCAGGCCCTCACACCCGACTGGAAGGGTGGGGGTTAAAGGGTAACGACATCTGCTTGCCCTaGGCCCGGTCAGGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: WARSGPHTRLEGWGLKGNDICLP*ARSGPH
Trigger: GTGAGGGCCTGACCGGGCCCAGGGCAAGCAGATGTC...GTTACCCTTTAACCCCCACCCTTCCAGTCGGGTGTGAGGGCCTGACCGGGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR TCA 90 bp GAGGGCAGGCAGGCCCCGAGGCGGCCCCGGGACGCACTCACAAAGACAAGAATAGACGCTGGCGTACTCTaGGAAGGACGGCTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: EGRQAPRRPRDALTKTRIDAGVL*EGRLRL
Trigger: AAGCCTGAGCCGTCCTTCTCAGAGTACGCCAGCGTC...TATTCTTGTCTTTGTGAGTGCGTCCCGGGGCCGCCTCGGGGCCTGCCTGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR GCA 90 bp CAGGAGGAGGGTGAGCCGGGTGTCCGAGATCCCATCAGTGGTGAGAGGCCACGAAGGGCTTGCGACATCTaGTTGCCCTGGGCCCGGTCA +
Preference number: 4 (lower is better)
Translates to: QEEGEPGVRDPISGERPRRACDI*LPWARS
Trigger: TGACCGGGCCCAGGGCAAGCAGATGTCGCAAGCCCT...TCGTGGCCTCTCACCACTGATGGGATCTCGGACACCCGGCTCACCCTCCTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR CCA 90 bp CAGGAGGAGGGTGAGCCGGGTGTCCGAGATCCCATCAGTGGTGAGAGGCCACGACTGCCCAGGAAGTGCTaGAGAGCCAAGGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: QEEGEPGVRDPISGERPRLPRKC*RAKEGW
Trigger: CCACCCCTCCTTGGCTCTCCAGCACTTCCTGGGCAG...TCGTGGCCTCTCACCACTGATGGGATCTCGGACACCCGGCTCACCCTCCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR GCA 90 bp TACCACAGCGGGGTCACAGAAGGCTGCACTACCAGCCGCGTGGCTCAGCTGAGAGGGGTCACAGAAGGCTaGACTACCAGCCGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: YHSGVTEGCTTSRVAQLRGVTEG*TTSRVA
Trigger: AGCCACGCGGCTGGTAGTGCAGCCTTCTGTGACCCC...TCTCAGCTGAGCCACGCGGCTGGTAGTGCAGCCTTCTGTGACCCCGCTGTGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR GCA 90 bp CCCATCAGTGGTGAGAGGCCACGAGACTCAGCTATGCAGGGTCAGGGCAGGAAGCTTGCGACATCTGCTTaGCCTGGGCCCGGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: PISGERPRDSAMQGQGRKLATSA*PGPGQA
Trigger: GGCCTGACCGGGCCCAGGGCAAGCAGATGTCGCAAG...CTTCCTGCCCTGACCCTGCATAGCTGAGTCTCGTGGCCTCTCACCACTGATGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR CCA 90 bp TACCACAGCGGGGTCACAGAAGGCTGCACTACCAGCCGCGTGGCTCAGCTGAGACTGCCCAGGAAGTGCTaGAGAGCCAAGGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: YHSGVTEGCTTSRVAQLRLPRKC*RAKEGW
Trigger: CCACCCCTCCTTGGCTCTCCAGCACTTCCTGGGCAG...TCTCAGCTGAGCCACGCGGCTGGTAGTGCAGCCTTCTGTGACCCCGCTGTGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp TACCACAGCGGGGTCACAGAAGGCTGCACTACCAGCCGCGTGGCTCAGCTGAGAAGCCCTCAGCAGCCCTaGGCAGGCTGGACTTACCAC +
Preference number: 4 (lower is better)
Translates to: YHSGVTEGCTTSRVAQLRSPQQP*AGWTYH
Trigger: GTGGTAAGTCCAGCCTGCCCAGGGCTGCTGAGGGCT...TCTCAGCTGAGCCACGCGGCTGGTAGTGCAGCCTTCTGTGACCCCGCTGTGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp GAGGGCAGGCAGGCCCCGAGGCGGCCCCGGGACGCACTCACAAAGACAAGAATACTCTGGCCAACCTTCTaGGACAGAGGGGGAATCAGC +
Preference number: 4 (lower is better)
Translates to: EGRQAPRRPRDALTKTRILWPTF*DRGGIS
Trigger: GCTGATTCCCCCTCTGTCCCAGAAGGTTGGCCAGAG...TATTCTTGTCTTTGTGAGTGCGTCCCGGGGCCGCCTCGGGGCCTGCCTGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR TCA 90 bp TACCACAGCGGGGTCACAGAAGGCTGCACTACCAGCCGCGTGGCTCAGCTGAGAGACGCTGGCGTACTCTaGGAAGGACGGCTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: YHSGVTEGCTTSRVAQLRDAGVL*EGRLRL
Trigger: AAGCCTGAGCCGTCCTTCTCAGAGTACGCCAGCGTC...TCTCAGCTGAGCCACGCGGCTGGTAGTGCAGCCTTCTGTGACCCCGCTGTGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR TCA 90 bp GAGGGCAGGCAGGCCCCGAGGCGGCCCCGGGACGCACTCACAAAGACAAGAATAGAGCTGGGTCTATGCTaGGCTCCTGCAGTTTCACCT +
Preference number: 4 (lower is better)
Translates to: EGRQAPRRPRDALTKTRIELGLC*APAVSP
Trigger: AGGTGAAACTGCAGGAGCTCAGCATAGACCCAGCTC...TATTCTTGTCTTTGTGAGTGCGTCCCGGGGCCGCCTCGGGGCCTGCCTGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR TCA 90 bp GAGGGCAGGCAGGCCCCGAGGCGGCCCCGGGACGCACTCACAAAGACAAGAATAAATTTGGAACTAGCCTaGGCCAGGTGGCTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: EGRQAPRRPRDALTKTRINLELA*ARWLGH
Trigger: GTGACCCAGCCACCTGGCTCAGGCTAGTTCCAAATT...TATTCTTGTCTTTGTGAGTGCGTCCCGGGGCCGCCTCGGGGCCTGCCTGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR GCA 90 bp CCCATCAGTGGTGAGAGGCCACGAGACTCAGCTATGCAGGGTCAGGGCAGGAAGCCCGAGCTTCACAGCTaGACCATCCCCCTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: PISGERPRDSAMQGQGRKPELHS*TIPLAV
Trigger: GACAGCCAGGGGGATGGTGCAGCTGTGAAGCTCGGG...CTTCCTGCCCTGACCCTGCATAGCTGAGTCTCGTGGCCTCTCACCACTGATGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR CCA 90 bp TGGGCCCGGTCAGGCCCTCACACCCGACTGGAAGGGTGGGGGTTAAAGGGTAACGAGCCAGAAATCCCTTaGGCATCCCAAGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: WARSGPHTRLEGWGLKGNEPEIP*ASQGQE
Trigger: CTCCTGGCCTTGGGATGCCCAAGGGATTTCTGGCTC...GTTACCCTTTAACCCCCACCCTTCCAGTCGGGTGTGAGGGCCTGACCGGGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp TCCTGCAGTTTCACCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTCTCCCCGCTTCCCACTaGCGAGAGGCTGGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: SCSFTCRTSRNGQDGSATLPASH*REAGGG
Trigger: GCCGCCTCCAGCCTCTCGCCAGTGGGAAGCGGGGAG...AGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGGTGAAACTGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400068.7
CDS-3UTR GCA 90 bp TCCTGCAGTTTCACCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTGGAGGGGGCCGTGGCTaGCCAGGAAGTGCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: SCSFTCRTSRNGQDGSATGGGRG*PGSAGE
Trigger: CTCTCCAGCACTTCCTGGGCAGCCACGGCCCCCTCC...AGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGGTGAAACTGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR GCA 90 bp CCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTTTTACAGCCTGAGGGAGGGGGCCGTGGCTaGCCAGGAAGTGCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: PVGPPGMGRMAQLLLQPEGGGRG*PGSAGE
Trigger: CTCTCCAGCACTTCCTGGGCAGCCACGGCCCCCTCC...CTCAGGCTGTAAAAGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp TGGGCCCGGTCAGGCCCTCACACCCGACTGGAAGGGTGGGGGTTAAAGGGTAACTCTAGAAGGGAGAGATaGGTCCGGGTGGAGCAACAC +
Preference number: 4 (lower is better)
Translates to: WARSGPHTRLEGWGLKGNSRRER*VRVEQH
Trigger: GTGTTGCTCCACCCGGACCCATCTCTCCCTTCTAGA...GTTACCCTTTAACCCCCACCCTTCCAGTCGGGTGTGAGGGCCTGACCGGGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp TACCACAGCGGGGTCACAGAAGGCTGCACTACCAGCCGCGTGGCTCAGCTGAGACTGGGTCACACCCTCTaGCCAACCTTCTGGGACAGA +
Preference number: 4 (lower is better)
Translates to: YHSGVTEGCTTSRVAQLRLGHTL*PTFWDR
Trigger: TCTGTCCCAGAAGGTTGGCCAGAGGGTGTGACCCAG...TCTCAGCTGAGCCACGCGGCTGGTAGTGCAGCCTTCTGTGACCCCGCTGTGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp CCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTTTTACAGCCTGAGCCACTGGCGAGAGGCTaGAGGCGGCGAAGGAGTCGG +
Preference number: 4 (lower is better)
Translates to: PVGPPGMGRMAQLLLQPEPLARG*RRRRSR
Trigger: CCGACTCCTTCGCCGCCTCCAGCCTCTCGCCAGTGG...CTCAGGCTGTAAAAGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400068.7
CDS-3UTR GCA 90 bp TACCACAGCGGGGTCACAGAAGGCTGCACTACCAGCCGCGTGGCTCAGCTGAGAGGCTGTCTCTCCAGCTaGAACCAACACGGACTTGTC +
Preference number: 4 (lower is better)
Translates to: YHSGVTEGCTTSRVAQLRGCLSS*NQHGLV
Trigger: GACAAGTCCGTGTTGGTTGCAGCTGGAGAGACAGCC...TCTCAGCTGAGCCACGCGGCTGGTAGTGCAGCCTTCTGTGACCCCGCTGTGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp TACCACAGCGGGGTCACAGAAGGCTGCACTACCAGCCGCGTGGCTCAGCTGAGATCTAGAAGGGAGAGATaGGTCCGGGTGGAGCAACAC +
Preference number: 4 (lower is better)
Translates to: YHSGVTEGCTTSRVAQLRSRRER*VRVEQH
Trigger: GTGTTGCTCCACCCGGACCCATCTCTCCCTTCTAGA...TCTCAGCTGAGCCACGCGGCTGGTAGTGCAGCCTTCTGTGACCCCGCTGTGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp TGGGCCCGGTCAGGCCCTCACACCCGACTGGAAGGGTGGGGGTTAAAGGGTAACCTTCTTGCCCATTCTTaGGGTTCTGGGACTTGGAGG +
Preference number: 4 (lower is better)
Translates to: WARSGPHTRLEGWGLKGNLLAHS*GSGTWR
Trigger: CCTCCAAGTCCCAGAACCCCAAGAATGGGCAAGAAG...GTTACCCTTTAACCCCCACCCTTCCAGTCGGGTGTGAGGGCCTGACCGGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp TCCTGCAGTTTCACCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTCAGCCCTGGGCAGGCTaGACTTACCACAGCGGGGTC +
Preference number: 4 (lower is better)
Translates to: SCSFTCRTSRNGQDGSATQPWAG*TYHSGV
Trigger: GACCCCGCTGTGGTAAGTCCAGCCTGCCCAGGGCTG...AGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGGTGAAACTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp CAGGAGGAGGGTGAGCCGGGTGTCCGAGATCCCATCAGTGGTGAGAGGCCACGAAGTGCTTATGAGAGGTaGTGGGGAGGGGTGTCATCT +
Preference number: 4 (lower is better)
Translates to: QEEGEPGVRDPISGERPRSAYER*WGGVSS
Trigger: AGATGACACCCCTCCCCACCACCTCTCATAAGCACT...TCGTGGCCTCTCACCACTGATGGGATCTCGGACACCCGGCTCACCCTCCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR CCA 90 bp TGGGCCCGGTCAGGCCCTCACACCCGACTGGAAGGGTGGGGGTTAAAGGGTAACCTCCTTCCGCAGGGTTaGTTCGACCTCTTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: WARSGPHTRLEGWGLKGNLLPQG*FDLFLF
Trigger: GAAAAGGAAGAGGTCGAACCAACCCTGCGGAAGGAG...GTTACCCTTTAACCCCCACCCTTCCAGTCGGGTGTGAGGGCCTGACCGGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR TCA 90 bp TACCACAGCGGGGTCACAGAAGGCTGCACTACCAGCCGCGTGGCTCAGCTGAGAGCTACTTTTACAGCCTaGGCCAGAAATCCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: YHSGVTEGCTTSRVAQLRATFTA*ARNPLG
Trigger: GCCCAAGGGATTTCTGGCTCAGGCTGTAAAAGTAGC...TCTCAGCTGAGCCACGCGGCTGGTAGTGCAGCCTTCTGTGACCCCGCTGTGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR GCA 90 bp TCCTTCCGCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGGAGGGGGCCGTGGCTaGCCAGGAAGTGCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: SFRRVGSTSSFSWGSIHKGGGRG*PGSAGE
Trigger: CTCTCCAGCACTTCCTGGGCAGCCACGGCCCCCTCC...CTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGCGGAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR GCA 90 bp CCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTTTTACAGCCTGAGCCCGAGCTTCACAGCTaGACCATCCCCCTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: PVGPPGMGRMAQLLLQPEPELHS*TIPLAV
Trigger: GACAGCCAGGGGGATGGTGCAGCTGTGAAGCTCGGG...CTCAGGCTGTAAAAGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR GCA 90 bp AGCTCTGGCCAAAGCTGTCCACATGGTCTGTTGGCTCAGCTAATTCCTGGATGCCTTGCGACATCTGCTTaGCCTGGGCCCGGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: SSGQSCPHGLLAQLIPGCLATSA*PGPGQA
Trigger: GGCCTGACCGGGCCCAGGGCAAGCAGATGTCGCAAG...GCATCCAGGAATTAGCTGAGCCAACAGACCATGTGGACAGCTTTGGCCAGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR GCA 90 bp TGGGCCCGGTCAGGCCCTCACACCCGACTGGAAGGGTGGGGGTTAAAGGGTAACAAACTCCTGAAACCATaGTCCTTCCGCAGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: WARSGPHTRLEGWGLKGNKLLKP*SFRRVG
Trigger: ACCAACCCTGCGGAAGGAGCATGGTTTCAGGAGTTT...GTTACCCTTTAACCCCCACCCTTCCAGTCGGGTGTGAGGGCCTGACCGGGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp TCCTGCAGTTTCACCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTCTGCCCAGGAAGTGCTaGAGAGCCAAGGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SCSFTCRTSRNGQDGSATLPRKC*RAKEGW
Trigger: CCACCCCTCCTTGGCTCTCCAGCACTTCCTGGGCAG...AGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGGTGAAACTGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp CCCATCAGTGGTGAGAGGCCACGAGACTCAGCTATGCAGGGTCAGGGCAGGAAGGCTCAGCTGAGAACATaGCCAAGTCAGTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: PISGERPRDSAMQGQGRKAQLRT*PSQSQP
Trigger: TGGCTGGGACTGACTTGGCCATGTTCTCAGCTGAGC...CTTCCTGCCCTGACCCTGCATAGCTGAGTCTCGTGGCCTCTCACCACTGATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR CCA 90 bp TCCTGCAGTTTCACCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTAGCCCTCAGCAGCCCTaGGCAGGCTGGACTTACCAC +
Preference number: 4 (lower is better)
Translates to: SCSFTCRTSRNGQDGSATSPQQP*AGWTYH
Trigger: GTGGTAAGTCCAGCCTGCCCAGGGCTGCTGAGGGCT...AGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGGTGAAACTGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp TACCACAGCGGGGTCACAGAAGGCTGCACTACCAGCCGCGTGGCTCAGCTGAGAGCTTATGAGAGGTGGTaGGGAGGGGTGTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: YHSGVTEGCTTSRVAQLRAYERW*GGVSSS
Trigger: TGAAGATGACACCCCTCCCCACCACCTCTCATAAGC...TCTCAGCTGAGCCACGCGGCTGGTAGTGCAGCCTTCTGTGACCCCGCTGTGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp TGGGCCCGGTCAGGCCCTCACACCCGACTGGAAGGGTGGGGGTTAAAGGGTAACGCTGCACCATCCCCCTaGCTGTCTTCAATTTATTCC +
Preference number: 4 (lower is better)
Translates to: WARSGPHTRLEGWGLKGNAAPSP*LSSIYS
Trigger: GGAATAAATTGAAGACAGCCAGGGGGATGGTGCAGC...GTTACCCTTTAACCCCCACCCTTCCAGTCGGGTGTGAGGGCCTGACCGGGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp TACCACAGCGGGGTCACAGAAGGCTGCACTACCAGCCGCGTGGCTCAGCTGAGAGGGTTAAAGGGTAACTaGGTCACACCCTCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: YHSGVTEGCTTSRVAQLRGLKGN*VTPSGQ
Trigger: TTGGCCAGAGGGTGTGACCCAGTTACCCTTTAACCC...TCTCAGCTGAGCCACGCGGCTGGTAGTGCAGCCTTCTGTGACCCCGCTGTGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp TACCACAGCGGGGTCACAGAAGGCTGCACTACCAGCCGCGTGGCTCAGCTGAGAGATGTCTGCATTTGGTaGGGAAGGAAAGTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: YHSGVTEGCTTSRVAQLRDVCIW*GRKVRP
Trigger: GGGCCTCACTTTCCTTCCCCACCAAATGCAGACATC...TCTCAGCTGAGCCACGCGGCTGGTAGTGCAGCCTTCTGTGACCCCGCTGTGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR TCA 90 bp TCCTGCAGTTTCACCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTGCCGCGTGGCTCAGCTaGGAACATGGCCAAGTCAGT +
Preference number: 4 (lower is better)
Translates to: SCSFTCRTSRNGQDGSATAAWLS*EHGQVS
Trigger: ACTGACTTGGCCATGTTCTCAGCTGAGCCACGCGGC...AGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGGTGAAACTGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR TCA 90 bp CCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTTTTACAGCCTGAGGCCGCGTGGCTCAGCTaGGAACATGGCCAAGTCAGT +
Preference number: 4 (lower is better)
Translates to: PVGPPGMGRMAQLLLQPEAAWLS*EHGQVS
Trigger: ACTGACTTGGCCATGTTCTCAGCTGAGCCACGCGGC...CTCAGGCTGTAAAAGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR GCA 90 bp TGTTTCCAAACCCTGGGGTCCATTCAATCCTCTTCCAGGCTTTGGCAGGAGGGCGAACTGGGTTGGCTGTaGTCATCACGGCGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: CFQTLGSIQSSSRLWQEGELGWL*SSRRLP
Trigger: AGGGAGCCGCCGTGATGAGCACAGCCAACCCAGTTC...GCCCTCCTGCCAAAGCCTGGAAGAGGATTGAATGGACCCCAGGGTTTGGAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR GCA 90 bp AGCTCTGGCCAAAGCTGTCCACATGGTCTGTTGGCTCAGCTAATTCCTGGATGCCCCGAGCTTCACAGCTaGACCATCCCCCTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: SSGQSCPHGLLAQLIPGCPELHS*TIPLAV
Trigger: GACAGCCAGGGGGATGGTGCAGCTGTGAAGCTCGGG...GCATCCAGGAATTAGCTGAGCCAACAGACCATGTGGACAGCTTTGGCCAGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR GCA 90 bp TGGGCCCGGTCAGGCCCTCACACCCGACTGGAAGGGTGGGGGTTAAAGGGTAACGTGTGCACACGTATGTaGTGTCTCTGGGTAAAAGAG +
Preference number: 4 (lower is better)
Translates to: WARSGPHTRLEGWGLKGNVCTRM*CLWVKE
Trigger: CTCTTTTACCCAGAGACAGCACATACGTGTGCACAC...GTTACCCTTTAACCCCCACCCTTCCAGTCGGGTGTGAGGGCCTGACCGGGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR GCA 90 bp TACCACAGCGGGGTCACAGAAGGCTGCACTACCAGCCGCGTGGCTCAGCTGAGAAAACTCCTGAAACCATaGTCCTTCCGCAGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: YHSGVTEGCTTSRVAQLRKLLKP*SFRRVG
Trigger: ACCAACCCTGCGGAAGGAGCATGGTTTCAGGAGTTT...TCTCAGCTGAGCCACGCGGCTGGTAGTGCAGCCTTCTGTGACCCCGCTGTGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp TACCACAGCGGGGTCACAGAAGGCTGCACTACCAGCCGCGTGGCTCAGCTGAGACCATTCTTGGGGTTCTaGGACTTGGAGGAACTCAAG +
Preference number: 4 (lower is better)
Translates to: YHSGVTEGCTTSRVAQLRPFLGF*DLEELK
Trigger: CTTGAGTTCCTCCAAGTCCCAGAACCCCAAGAATGG...TCTCAGCTGAGCCACGCGGCTGGTAGTGCAGCCTTCTGTGACCCCGCTGTGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp CCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTTTTACAGCCTGAGCTCAGAAAGCCGGGATaGGGGCGGTCACTAAAGGGG +
Preference number: 4 (lower is better)
Translates to: PVGPPGMGRMAQLLLQPELRKPG*GRSLKG
Trigger: CCCCTTTAGTGACCGCCCCCATCCCGGCTTTCTGAG...CTCAGGCTGTAAAAGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp TCCTGCAGTTTCACCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTGCCACACGGGAGCTCTaGCCAAAGCTGTCCACATGG +
Preference number: 4 (lower is better)
Translates to: SCSFTCRTSRNGQDGSATATREL*PKLSTW
Trigger: CCATGTGGACAGCTTTGGCCAGAGCTCCCGTGTGGC...AGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGGTGAAACTGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp TACCACAGCGGGGTCACAGAAGGCTGCACTACCAGCCGCGTGGCTCAGCTGAGACGTATGTGCTGTCTCTaGGTAAAAGAGAGGGAGACG +
Preference number: 4 (lower is better)
Translates to: YHSGVTEGCTTSRVAQLRRMCCL*VKERET
Trigger: CGTCTCCCTCTCTTTTACCCAGAGACAGCACATACG...TCTCAGCTGAGCCACGCGGCTGGTAGTGCAGCCTTCTGTGACCCCGCTGTGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR CAA 72 bp CCAGTGCCAAGCGTGGGCTCAGTGCTTCCAACCTCCTaGAATCCACACAGTCACCCTGGCAGGGACTATTCC +
Preference number: 4 (lower is better)
Translates to: PVPSVGSVLPTS*NPHSHPGRDYS
Trigger: GGAATAGTCCCTGCCAGGGTGACTGTGTGGATTCAAGGAGGTTGGAAGCACTGAGCCCACGCTTGGCACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR TCA 90 bp AGCTCTGGCCAAAGCTGTCCACATGGTCTGTTGGCTCAGCTAATTCCTGGATGCGACGCTGGCGTACTCTaGGAAGGACGGCTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: SSGQSCPHGLLAQLIPGCDAGVL*EGRLRL
Trigger: AAGCCTGAGCCGTCCTTCTCAGAGTACGCCAGCGTC...GCATCCAGGAATTAGCTGAGCCAACAGACCATGTGGACAGCTTTGGCCAGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR TCA 90 bp CCCATCAGTGGTGAGAGGCCACGAGACTCAGCTATGCAGGGTCAGGGCAGGAAGCAAGGCCAGGAGTCATaGACATTAGCGTCTCAACTC +
Preference number: 4 (lower is better)
Translates to: PISGERPRDSAMQGQGRKQGQES*TLASQL
Trigger: GAGTTGAGACGCTAATGTTCATGACTCCTGGCCTTG...CTTCCTGCCCTGACCCTGCATAGCTGAGTCTCGTGGCCTCTCACCACTGATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR TCA 90 bp CCCATCAGTGGTGAGAGGCCACGAGACTCAGCTATGCAGGGTCAGGGCAGGAAGCCTGGATGCCATCATTaGAATCACCAGGTGACCATC +
Preference number: 4 (lower is better)
Translates to: PISGERPRDSAMQGQGRKPGCHH*NHQVTI
Trigger: GATGGTCACCTGGTGATTTCAATGATGGCATCCAGG...CTTCCTGCCCTGACCCTGCATAGCTGAGTCTCGTGGCCTCTCACCACTGATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR GCA 90 bp TGGGCCCGGTCAGGCCCTCACACCCGACTGGAAGGGTGGGGGTTAAAGGGTAACTTCTTCTCGGGCTCATaGAACCTTGTAGAAGAAGTG +
Preference number: 4 (lower is better)
Translates to: WARSGPHTRLEGWGLKGNFFSGS*NLVEEV
Trigger: CACTTCTTCTACAAGGTTGCATGAGCCCGAGAAGAA...GTTACCCTTTAACCCCCACCCTTCCAGTCGGGTGTGAGGGCCTGACCGGGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR GCA 90 bp GAGGTGCTGTTTGAACTCCCACAGCTACAAAGCAGCAGAGCCGAGATCCAAACTGGGGTCACAGAAGGCTaGACTACCAGCCGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: EVLFELPQLQSSRAEIQTGVTEG*TTSRVA
Trigger: AGCCACGCGGCTGGTAGTGCAGCCTTCTGTGACCCC...AGTTTGGATCTCGGCTCTGCTGCTTTGTAGCTGTGGGAGTTCAAACAGCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR GCA 90 bp TACCACAGCGGGGTCACAGAAGGCTGCACTACCAGCCGCGTGGCTCAGCTGAGAGTGGATTCTCCAGGTTaGCAGGCTAAAGCTAAAGCT +
Preference number: 4 (lower is better)
Translates to: YHSGVTEGCTTSRVAQLRVDSPG*QAKAKA
Trigger: AGCTTTAGCTTTAGCCTGGCAACCTGGAGAATCCAC...TCTCAGCTGAGCCACGCGGCTGGTAGTGCAGCCTTCTGTGACCCCGCTGTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR GCA 90 bp CCGGGACGCACTCACAAAGACAAGAATACTGAACACCGGAAGGACTCATTATTATCCATGGGCCGCGGCTaGGGAGCGAGGAGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: PGRTHKDKNTEHRKDSLLSMGRG*GARRES
Trigger: GCTCTCCCTCCTCGCTCCGCAGCCGCGGCCCATGGA...TAATAATGAGTCCTTCCGGTGTTCAGTATTCTTGTCTTTGTGAGTGCGTCCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358771.5
CDS-3UTR GCA 90 bp TGTTTCCAAACCCTGGGGTCCATTCAATCCTCTTCCAGGCTTTGGCAGGAGGGCCACGAGACTCAGCTATaGAGGGTCAGGGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: CFQTLGSIQSSSRLWQEGHETQL*RVRAGR
Trigger: CCTTCCTGCCCTGACCCTGCATAGCTGAGTCTCGTG...GCCCTCCTGCCAAAGCCTGGAAGAGGATTGAATGGACCCCAGGGTTTGGAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR CCA 90 bp TACCACAGCGGGGTCACAGAAGGCTGCACTACCAGCCGCGTGGCTCAGCTGAGAGAAGAAGTGGAGCCCTaGGCTTTCTTCTGTCTGATT +
Preference number: 4 (lower is better)
Translates to: YHSGVTEGCTTSRVAQLREEVEP*AFFCLI
Trigger: AATCAGACAGAAGAAAGCCCAGGGCTCCACTTCTTC...TCTCAGCTGAGCCACGCGGCTGGTAGTGCAGCCTTCTGTGACCCCGCTGTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp AGCTCTGGCCAAAGCTGTCCACATGGTCTGTTGGCTCAGCTAATTCCTGGATGCCACGGCGGCTCCCTGTaGGACAAGAAAGCGCGTAGA +
Preference number: 4 (lower is better)
Translates to: SSGQSCPHGLLAQLIPGCHGGSL*DKKARR
Trigger: TCTACGCGCTTTCTTGTCCCACAGGGAGCCGCCGTG...GCATCCAGGAATTAGCTGAGCCAACAGACCATGTGGACAGCTTTGGCCAGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp CCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTTTTACAGCCTGAGCTCTGGCCAACCTTCTaGGACAGAGGGGGAATCAGC +
Preference number: 4 (lower is better)
Translates to: PVGPPGMGRMAQLLLQPELWPTF*DRGGIS
Trigger: GCTGATTCCCCCTCTGTCCCAGAAGGTTGGCCAGAG...CTCAGGCTGTAAAAGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp TCCTGCAGTTTCACCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTCTGGGTCACACCCTCTaGCCAACCTTCTGGGACAGA +
Preference number: 4 (lower is better)
Translates to: SCSFTCRTSRNGQDGSATLGHTL*PTFWDR
Trigger: TCTGTCCCAGAAGGTTGGCCAGAGGGTGTGACCCAG...AGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGGTGAAACTGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp CTGGGACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAATCCCTCCAGGACAACGACATCTGCTTGCCCTaGGCCCGGTCAGGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: LGLGGTQVFAVRKSLQDNDICLP*ARSGPH
Trigger: GTGAGGGCCTGACCGGGCCCAGGGCAAGCAGATGTC...GTTGTCCTGGAGGGATTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp TGTTTCCAAACCCTGGGGTCCATTCAATCCTCTTCCAGGCTTTGGCAGGAGGGCGAGCCAGAAATCCCTTaGGCATCCCAAGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: CFQTLGSIQSSSRLWQEGEPEIP*ASQGQE
Trigger: CTCCTGGCCTTGGGATGCCCAAGGGATTTCTGGCTC...GCCCTCCTGCCAAAGCCTGGAAGAGGATTGAATGGACCCCAGGGTTTGGAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR CCA 90 bp CCCATCAGTGGTGAGAGGCCACGAGACTCAGCTATGCAGGGTCAGGGCAGGAAGCAGGAATGGGCAGGATaGCTCAGCTACTTTTACAGC +
Preference number: 4 (lower is better)
Translates to: PISGERPRDSAMQGQGRKQEWAG*LSYFYS
Trigger: GCTGTAAAAGTAGCTGAGCCATCCTGCCCATTCCTG...CTTCCTGCCCTGACCCTGCATAGCTGAGTCTCGTGGCCTCTCACCACTGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR CCA 90 bp TCCTTCCGCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGCCTGAGCCAGGTGGCTaGGTCACTGTGGCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SFRRVGSTSSFSWGSIHKPEPGG*VTVAPR
Trigger: TCTGGGAGCCACAGTGACCCAGCCACCTGGCTCAGG...CTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGCGGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp TGGGCCCGGTCAGGCCCTCACACCCGACTGGAAGGGTGGGGGTTAAAGGGTAACAATACACAAGGTATGTaGATTCTCCAGGTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: WARSGPHTRLEGWGLKGNNTQGM*ILQVAR
Trigger: CCTGGCAACCTGGAGAATCCACATACCTTGTGTATT...GTTACCCTTTAACCCCCACCCTTCCAGTCGGGTGTGAGGGCCTGACCGGGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp GAGGGCAGGCAGGCCCCGAGGCGGCCCCGGGACGCACTCACAAAGACAAGAATACAACTATATACAAAATaGGGCCTGTTTCCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: EGRQAPRRPRDALTKTRIQLYTK*GLFPSQ
Trigger: CTGGGAAGGAAACAGGCCCCATTTTGTATATAGTTG...TATTCTTGTCTTTGTGAGTGCGTCCCGGGGCCGCCTCGGGGCCTGCCTGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR TCA 90 bp CCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTTTTACAGCCTGAGGAGCTGGGTCTATGCTaGGCTCCTGCAGTTTCACCT +
Preference number: 4 (lower is better)
Translates to: PVGPPGMGRMAQLLLQPEELGLC*APAVSP
Trigger: AGGTGAAACTGCAGGAGCTCAGCATAGACCCAGCTC...CTCAGGCTGTAAAAGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR GCA 90 bp AAGAGGTGCTGTTTGAACTCCCACAGCTACAAAGCAGCAGAGCCGAGATCCAAAGGGGTCACAGAAGGCTaGACTACCAGCCGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: KRCCLNSHSYKAAEPRSKGVTEG*TTSRVA
Trigger: AGCCACGCGGCTGGTAGTGCAGCCTTCTGTGACCCC...TTTGGATCTCGGCTCTGCTGCTTTGTAGCTGTGGGAGTTCAAACAGCACCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR GCA 90 bp GCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGAGGGCTTGCGACATCTaGTTGCCCTGGGCCCGGTCA +
Preference number: 4 (lower is better)
Translates to: AGLVRPLPFPGVQYTRYVRACDI*LPWARS
Trigger: TGACCGGGCCCAGGGCAAGCAGATGTCGCAAGCCCT...CACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp CCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTTTTACAGCCTGAGGCTCAGCTGAGAACATaGCCAAGTCAGTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: PVGPPGMGRMAQLLLQPEAQLRT*PSQSQP
Trigger: TGGCTGGGACTGACTTGGCCATGTTCTCAGCTGAGC...CTCAGGCTGTAAAAGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp CTGGGACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAATCCCTCCAGGACAACAGCCCTCAGCAGCCCTaGGCAGGCTGGACTTACCAC +
Preference number: 4 (lower is better)
Translates to: LGLGGTQVFAVRKSLQDNSPQQP*AGWTYH
Trigger: GTGGTAAGTCCAGCCTGCCCAGGGCTGCTGAGGGCT...GTTGTCCTGGAGGGATTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp AGCTCTGGCCAAAGCTGTCCACATGGTCTGTTGGCTCAGCTAATTCCTGGATGCGAGCCAGAAATCCCTTaGGCATCCCAAGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: SSGQSCPHGLLAQLIPGCEPEIP*ASQGQE
Trigger: CTCCTGGCCTTGGGATGCCCAAGGGATTTCTGGCTC...GCATCCAGGAATTAGCTGAGCCAACAGACCATGTGGACAGCTTTGGCCAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp AGCTCTGGCCAAAGCTGTCCACATGGTCTGTTGGCTCAGCTAATTCCTGGATGCCATCCCCCAGAGAGCTaGGTCTATGCTGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: SSGQSCPHGLLAQLIPGCHPPES*VYAELL
Trigger: CAGGAGCTCAGCATAGACCCAGCTCTCTGGGGGATG...GCATCCAGGAATTAGCTGAGCCAACAGACCATGTGGACAGCTTTGGCCAGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp TCCTTCCGCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGCCACACGGGAGCTCTaGCCAAAGCTGTCCACATGG +
Preference number: 4 (lower is better)
Translates to: SFRRVGSTSSFSWGSIHKATREL*PKLSTW
Trigger: CCATGTGGACAGCTTTGGCCAGAGCTCCCGTGTGGC...CTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGCGGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp CTGGGACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAATCCCTCCAGGACAACCCTGAGCCAGGTGGCTaGGTCACTGTGGCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: LGLGGTQVFAVRKSLQDNPEPGG*VTVAPR
Trigger: TCTGGGAGCCACAGTGACCCAGCCACCTGGCTCAGG...GTTGTCCTGGAGGGATTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp TGGGCCCGGTCAGGCCCTCACACCCGACTGGAAGGGTGGGGGTTAAAGGGTAACACCTCTTCCTTTTCCTaGGGTTCAATACACAAGGTA +
Preference number: 4 (lower is better)
Translates to: WARSGPHTRLEGWGLKGNTSSFS*GSIHKV
Trigger: TACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGT...GTTACCCTTTAACCCCCACCCTTCCAGTCGGGTGTGAGGGCCTGACCGGGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR TCA 90 bp TGTTTCCAAACCCTGGGGTCCATTCAATCCTCTTCCAGGCTTTGGCAGGAGGGCAGGGAGTGGCTGACCTaGTCCTTCTTGCCCATTCTT +
Preference number: 4 (lower is better)
Translates to: CFQTLGSIQSSSRLWQEGREWLT*SFLPIL
Trigger: AAGAATGGGCAAGAAGGATCAGGTCAGCCACTCCCT...GCCCTCCTGCCAAAGCCTGGAAGAGGATTGAATGGACCCCAGGGTTTGGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR TCA 90 bp CTGGGACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAATCCCTCCAGGACAACGCCGCGTGGCTCAGCTaGGAACATGGCCAAGTCAGT +
Preference number: 4 (lower is better)
Translates to: LGLGGTQVFAVRKSLQDNAAWLS*EHGQVS
Trigger: ACTGACTTGGCCATGTTCTCAGCTGAGCCACGCGGC...GTTGTCCTGGAGGGATTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR TCA 90 bp TGTTTCCAAACCCTGGGGTCCATTCAATCCTCTTCCAGGCTTTGGCAGGAGGGCATTGAAATCACCAGGTaGCCATCCCCCAGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: CFQTLGSIQSSSRLWQEGIEITR*PSPREL
Trigger: CAGCTCTCTGGGGGATGGTCACCTGGTGATTTCAAT...GCCCTCCTGCCAAAGCCTGGAAGAGGATTGAATGGACCCCAGGGTTTGGAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR GCA 90 bp GCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGAACTGGGTTGGCTGTaGTCATCACGGCGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: AGLVRPLPFPGVQYTRYVELGWL*SSRRLP
Trigger: AGGGAGCCGCCGTGATGAGCACAGCCAACCCAGTTC...CACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR GCA 90 bp ACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAATCCCTCCAGGACAACAAACTGGAGGGGGCCGTGGCTaGCCAGGAAGTGCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: TWRNSSLRCKKIPPGQQTGGGRG*PGSAGE
Trigger: CTCTCCAGCACTTCCTGGGCAGCCACGGCCCCCTCC...AGTTTGTTGTCCTGGAGGGATTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR GCA 90 bp TGGGCCCGGTCAGGCCCTCACACCCGACTGGAAGGGTGGGGGTTAAAGGGTAACCCTCAGTTTCAAGATTaGACGTTTCACATTTCTCAG +
Preference number: 4 (lower is better)
Translates to: WARSGPHTRLEGWGLKGNPQFQD*TFHISQ
Trigger: CTGAGAAATGTGAAACGTGCAATCTTGAAACTGAGG...GTTACCCTTTAACCCCCACCCTTCCAGTCGGGTGTGAGGGCCTGACCGGGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR GCA 90 bp GGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGATTCTTGCGACATCTGCTTaGCCTGGGCCCGGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: GWFDLFLFLGFNTQGMWILATSA*PGPGQA
Trigger: GGCCTGACCGGGCCCAGGGCAAGCAGATGTCGCAAG...AATCCACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR GCA 90 bp ACTTTACGGATGAGCAGACTGAGGCATTGGGTCTCGATAAGACTGCACTGTCAAAGGGCTTGCGACATCTaGTTGCCCTGGGCCCGGTCA +
Preference number: 4 (lower is better)
Translates to: TLRMSRLRHWVSIRLHCQRACDI*LPWARS
Trigger: TGACCGGGCCCAGGGCAAGCAGATGTCGCAAGCCCT...TTGACAGTGCAGTCTTATCGAGACCCAATGCCTCAGTCTGCTCATCCGTAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR GCA 90 bp TACCACAGCGGGGTCACAGAAGGCTGCACTACCAGCCGCGTGGCTCAGCTGAGACAAGCATTAGATGTCTaGATTTGGTGGGGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: YHSGVTEGCTTSRVAQLRQALDV*IWWGRK
Trigger: TTTCCTTCCCCACCAAATGCAGACATCTAATGCTTG...TCTCAGCTGAGCCACGCGGCTGGTAGTGCAGCCTTCTGTGACCCCGCTGTGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR CCA 90 bp CCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTTTTACAGCCTGAGCTTCTTGCCCATTCTTaGGGTTCTGGGACTTGGAGG +
Preference number: 4 (lower is better)
Translates to: PVGPPGMGRMAQLLLQPELLAHS*GSGTWR
Trigger: CCTCCAAGTCCCAGAACCCCAAGAATGGGCAAGAAG...CTCAGGCTGTAAAAGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp TCCTGCAGTTTCACCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTCTTCTTGCCCATTCTTaGGGTTCTGGGACTTGGAGG +
Preference number: 4 (lower is better)
Translates to: SCSFTCRTSRNGQDGSATLLAHS*GSGTWR
Trigger: CCTCCAAGTCCCAGAACCCCAAGAATGGGCAAGAAG...AGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGGTGAAACTGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp GGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGATTCAGCCCTGGGCAGGCTaGACTTACCACAGCGGGGTC +
Preference number: 4 (lower is better)
Translates to: GWFDLFLFLGFNTQGMWIQPWAG*TYHSGV
Trigger: GACCCCGCTGTGGTAAGTCCAGCCTGCCCAGGGCTG...AATCCACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp TCCTGCAGTTTCACCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTAGTGCTTATGAGAGGTaGTGGGGAGGGGTGTCATCT +
Preference number: 4 (lower is better)
Translates to: SCSFTCRTSRNGQDGSATSAYER*WGGVSS
Trigger: AGATGACACCCCTCCCCACCACCTCTCATAAGCACT...AGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGGTGAAACTGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp TCCTTCCGCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGCTCTGGCCAACCTTCTaGGACAGAGGGGGAATCAGC +
Preference number: 4 (lower is better)
Translates to: SFRRVGSTSSFSWGSIHKLWPTF*DRGGIS
Trigger: GCTGATTCCCCCTCTGTCCCAGAAGGTTGGCCAGAG...CTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGCGGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp CCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTTTTACAGCCTGAGGGGTTAAAGGGTAACTaGGTCACACCCTCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: PVGPPGMGRMAQLLLQPEGLKGN*VTPSGQ
Trigger: TTGGCCAGAGGGTGTGACCCAGTTACCCTTTAACCC...CTCAGGCTGTAAAAGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp AGCTCTGGCCAAAGCTGTCCACATGGTCTGTTGGCTCAGCTAATTCCTGGATGCACCCGACTGGAAGGGTaGGGGTTAAAGGGTAACTGG +
Preference number: 4 (lower is better)
Translates to: SSGQSCPHGLLAQLIPGCTRLEG*GLKGNW
Trigger: CCAGTTACCCTTTAACCCCCACCCTTCCAGTCGGGT...GCATCCAGGAATTAGCTGAGCCAACAGACCATGTGGACAGCTTTGGCCAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp GGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGATTGACATCTGCTTGCCCTaGGCCCGGTCAGGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: GWFDLFLFLGFNTQGMWIDICLP*ARSGPH
Trigger: GTGAGGGCCTGACCGGGCCCAGGGCAAGCAGATGTC...AATCCACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp GCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGCCACACGGGAGCTCTaGCCAAAGCTGTCCACATGG +
Preference number: 4 (lower is better)
Translates to: AGLVRPLPFPGVQYTRYVATREL*PKLSTW
Trigger: CCATGTGGACAGCTTTGGCCAGAGCTCCCGTGTGGC...CACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp CCCATTCTTGGGGTTCTGGGACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAACCTGAGCCAGGTGGCTaGGTCACTGTGGCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: PILGVLGLGGTQVFAVRKPEPGG*VTVAPR
Trigger: TCTGGGAGCCACAGTGACCCAGCCACCTGGCTCAGG...TTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGTCCCAGAACCCCAAGAATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp TACCACAGCGGGGTCACAGAAGGCTGCACTACCAGCCGCGTGGCTCAGCTGAGAACCTCTTCCTTTTCCTaGGGTTCAATACACAAGGTA +
Preference number: 4 (lower is better)
Translates to: YHSGVTEGCTTSRVAQLRTSSFS*GSIHKV
Trigger: TACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGT...TCTCAGCTGAGCCACGCGGCTGGTAGTGCAGCCTTCTGTGACCCCGCTGTGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp TCCTGCAGTTTCACCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTCTCCTTCCGCAGGGTTaGTTCGACCTCTTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: SCSFTCRTSRNGQDGSATLLPQG*FDLFLF
Trigger: GAAAAGGAAGAGGTCGAACCAACCCTGCGGAAGGAG...AGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGGTGAAACTGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp CCCATCAGTGGTGAGAGGCCACGAGACTCAGCTATGCAGGGTCAGGGCAGGAAGGTTGTTTCCAAACCCTaGGGTCCATTCAATCCTCTT +
Preference number: 4 (lower is better)
Translates to: PISGERPRDSAMQGQGRKVVSKP*GPFNPL
Trigger: AAGAGGATTGAATGGACCCCAGGGTTTGGAAACAAC...CTTCCTGCCCTGACCCTGCATAGCTGAGTCTCGTGGCCTCTCACCACTGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR TCA 90 bp AGCTCTGGCCAAAGCTGTCCACATGGTCTGTTGGCTCAGCTAATTCCTGGATGCAGGGAGTGGCTGACCTaGTCCTTCTTGCCCATTCTT +
Preference number: 4 (lower is better)
Translates to: SSGQSCPHGLLAQLIPGCREWLT*SFLPIL
Trigger: AAGAATGGGCAAGAAGGATCAGGTCAGCCACTCCCT...GCATCCAGGAATTAGCTGAGCCAACAGACCATGTGGACAGCTTTGGCCAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR TCA 90 bp CCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTTTTACAGCCTGAGCCTGGATGCCATCATTaGAATCACCAGGTGACCATC +
Preference number: 4 (lower is better)
Translates to: PVGPPGMGRMAQLLLQPEPGCHH*NHQVTI
Trigger: GATGGTCACCTGGTGATTTCAATGATGGCATCCAGG...CTCAGGCTGTAAAAGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR GCA 90 bp TCCTTCCGCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGGCTGTCTCTCCAGCTaGAACCAACACGGACTTGTC +
Preference number: 4 (lower is better)
Translates to: SFRRVGSTSSFSWGSIHKGCLSS*NQHGLV
Trigger: GACAAGTCCGTGTTGGTTGCAGCTGGAGAGACAGCC...CTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGCGGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp AGCTCTGGCCAAAGCTGTCCACATGGTCTGTTGGCTCAGCTAATTCCTGGATGCTGGGGTTCTGGGACTTaGAGGAACTCAAGTCTTCGC +
Preference number: 4 (lower is better)
Translates to: SSGQSCPHGLLAQLIPGCWGSGT*RNSSLR
Trigger: GCGAAGACTTGAGTTCCTCCAAGTCCCAGAACCCCA...GCATCCAGGAATTAGCTGAGCCAACAGACCATGTGGACAGCTTTGGCCAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp TGTTTCCAAACCCTGGGGTCCATTCAATCCTCTTCCAGGCTTTGGCAGGAGGGCCCATTCTTGGGGTTCTaGGACTTGGAGGAACTCAAG +
Preference number: 4 (lower is better)
Translates to: CFQTLGSIQSSSRLWQEGPFLGF*DLEELK
Trigger: CTTGAGTTCCTCCAAGTCCCAGAACCCCAAGAATGG...GCCCTCCTGCCAAAGCCTGGAAGAGGATTGAATGGACCCCAGGGTTTGGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR CCA 90 bp TCCTTCCGCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGCTCAGCTGAGAACATaGCCAAGTCAGTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: SFRRVGSTSSFSWGSIHKAQLRT*PSQSQP
Trigger: TGGCTGGGACTGACTTGGCCATGTTCTCAGCTGAGC...CTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGCGGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp CCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTTTTACAGCCTGAGAGCAGACTGAGGCATTaGGTCTCGATAAGACTGCAC +
Preference number: 4 (lower is better)
Translates to: PVGPPGMGRMAQLLLQPESRLRH*VSIRLH
Trigger: GTGCAGTCTTATCGAGACCCAATGCCTCAGTCTGCT...CTCAGGCTGTAAAAGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp CCCATTCTTGGGGTTCTGGGACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAACTCAGAAAGCCGGGATaGGGGCGGTCACTAAAGGGG +
Preference number: 4 (lower is better)
Translates to: PILGVLGLGGTQVFAVRKLRKPG*GRSLKG
Trigger: CCCCTTTAGTGACCGCCCCCATCCCGGCTTTCTGAG...TTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGTCCCAGAACCCCAAGAATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp TCCTGCAGTTTCACCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTGCTGCACCATCCCCCTaGCTGTCTTCAATTTATTCC +
Preference number: 4 (lower is better)
Translates to: SCSFTCRTSRNGQDGSATAAPSP*LSSIYS
Trigger: GGAATAAATTGAAGACAGCCAGGGGGATGGTGCAGC...AGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGGTGAAACTGCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp TCCTGCAGTTTCACCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTCAGGAATGGGCAGGATaGCTCAGCTACTTTTACAGC +
Preference number: 4 (lower is better)
Translates to: SCSFTCRTSRNGQDGSATQEWAG*LSYFYS
Trigger: GCTGTAAAAGTAGCTGAGCCATCCTGCCCATTCCTG...AGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGGTGAAACTGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR CAA 72 bp TGGTCTGTTGGCTCAGCTAATTCCTGGATGCCATCATaGAAATCACCAGGTGACCATCCCCCAGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: WSVGSANSWMPS*KSPGDHPPESW
Trigger: CCAGCTCTCTGGGGGATGGTCACCTGGTGATTTCAATGATGGCATCCAGGAATTAGCTGAGCCAACAGACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR TCA 90 bp GGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGATTGCCGCGTGGCTCAGCTaGGAACATGGCCAAGTCAGT +
Preference number: 4 (lower is better)
Translates to: GWFDLFLFLGFNTQGMWIAAWLS*EHGQVS
Trigger: ACTGACTTGGCCATGTTCTCAGCTGAGCCACGCGGC...AATCCACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR TCA 90 bp CCCATCAGTGGTGAGAGGCCACGAGACTCAGCTATGCAGGGTCAGGGCAGGAAGAGTTATAGTGAAGACTaGATAAATAGGGCTTGCGAC +
Preference number: 4 (lower is better)
Translates to: PISGERPRDSAMQGQGRKSYSED*INRACD
Trigger: GTCGCAAGCCCTATTTATTCAGTCTTCACTATAACT...CTTCCTGCCCTGACCCTGCATAGCTGAGTCTCGTGGCCTCTCACCACTGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR TCA 90 bp CTGGGACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAATCCCTCCAGGACAACGAGCTGGGTCTATGCTaGGCTCCTGCAGTTTCACCT +
Preference number: 4 (lower is better)
Translates to: LGLGGTQVFAVRKSLQDNELGLC*APAVSP
Trigger: AGGTGAAACTGCAGGAGCTCAGCATAGACCCAGCTC...GTTGTCCTGGAGGGATTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR TCA 90 bp GAGGTGCTGTTTGAACTCCCACAGCTACAAAGCAGCAGAGCCGAGATCCAAACTATTGAAATCACCAGGTaGCCATCCCCCAGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: EVLFELPQLQSSRAEIQTIEITR*PSPREL
Trigger: CAGCTCTCTGGGGGATGGTCACCTGGTGATTTCAAT...AGTTTGGATCTCGGCTCTGCTGCTTTGTAGCTGTGGGAGTTCAAACAGCACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR TCA 90 bp GCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGAATTTGGAACTAGCCTaGGCCAGGTGGCTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: AGLVRPLPFPGVQYTRYVNLELA*ARWLGH
Trigger: GTGACCCAGCCACCTGGCTCAGGCTAGTTCCAAATT...CACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR TCA 90 bp CTGGGACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAATCCCTCCAGGACAACAATTTGGAACTAGCCTaGGCCAGGTGGCTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: LGLGGTQVFAVRKSLQDNNLELA*ARWLGH
Trigger: GTGACCCAGCCACCTGGCTCAGGCTAGTTCCAAATT...GTTGTCCTGGAGGGATTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR TCA 90 bp TGTTTCCAAACCCTGGGGTCCATTCAATCCTCTTCCAGGCTTTGGCAGGAGGGCCAAAGAGGTGCTGTTTaGACTCCCACAGCTACAAAG +
Preference number: 4 (lower is better)
Translates to: CFQTLGSIQSSSRLWQEGQRGAV*TPTATK
Trigger: CTTTGTAGCTGTGGGAGTTCAAACAGCACCTCTTTG...GCCCTCCTGCCAAAGCCTGGAAGAGGATTGAATGGACCCCAGGGTTTGGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR GCA 90 bp CTGGGACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAATCCCTCCAGGACAACGGCTGTCTCTCCAGCTaGAACCAACACGGACTTGTC +
Preference number: 4 (lower is better)
Translates to: LGLGGTQVFAVRKSLQDNGCLSS*NQHGLV
Trigger: GACAAGTCCGTGTTGGTTGCAGCTGGAGAGACAGCC...GTTGTCCTGGAGGGATTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR GCA 90 bp GGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGATTGAACTGGGTTGGCTGTaGTCATCACGGCGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: GWFDLFLFLGFNTQGMWIELGWL*SSRRLP
Trigger: AGGGAGCCGCCGTGATGAGCACAGCCAACCCAGTTC...AATCCACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR GCA 90 bp ACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAATCCCTCCAGGACAACAAACTGGGGTCACAGAAGGCTaGACTACCAGCCGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: TWRNSSLRCKKIPPGQQTGVTEG*TTSRVA
Trigger: AGCCACGCGGCTGGTAGTGCAGCCTTCTGTGACCCC...AGTTTGTTGTCCTGGAGGGATTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR GCA 90 bp ACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAATCCCTCCAGGACAACAAACTAGGGCTTGCGACATCTaGTTGCCCTGGGCCCGGTCA +
Preference number: 4 (lower is better)
Translates to: TWRNSSLRCKKIPPGQQTRACDI*LPWARS
Trigger: TGACCGGGCCCAGGGCAAGCAGATGTCGCAAGCCCT...AGTTTGTTGTCCTGGAGGGATTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR GCA 90 bp TGTTTCCAAACCCTGGGGTCCATTCAATCCTCTTCCAGGCTTTGGCAGGAGGGCGTGGATTCTCCAGGTTaGCAGGCTAAAGCTAAAGCT +
Preference number: 4 (lower is better)
Translates to: CFQTLGSIQSSSRLWQEGVDSPG*QAKAKA
Trigger: AGCTTTAGCTTTAGCCTGGCAACCTGGAGAATCCAC...GCCCTCCTGCCAAAGCCTGGAAGAGGATTGAATGGACCCCAGGGTTTGGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR GCA 90 bp CCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTTTTACAGCCTGAGCGTGAGGGGCTCAAATaGTGTAGGTTGTTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: PVGPPGMGRMAQLLLQPEREGLK*CRLFPN
Trigger: GTTTGGAAACAACCTACAGCATTTGAGCCCCTCACG...CTCAGGCTGTAAAAGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR GCA 90 bp CCCATTCTTGGGGTTCTGGGACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAACACGAGACTCAGCTATaGAGGGTCAGGGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PILGVLGLGGTQVFAVRKHETQL*RVRAGR
Trigger: CCTTCCTGCCCTGACCCTGCATAGCTGAGTCTCGTG...TTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGTCCCAGAACCCCAAGAATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR CCA 90 bp CCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTTTTACAGCCTGAGGAAGAAGTGGAGCCCTaGGCTTTCTTCTGTCTGATT +
Preference number: 4 (lower is better)
Translates to: PVGPPGMGRMAQLLLQPEEEVEP*AFFCLI
Trigger: AATCAGACAGAAGAAAGCCCAGGGCTCCACTTCTTC...CTCAGGCTGTAAAAGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp TCCTTCCGCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGTGGGGTTCTGGGACTTaGAGGAACTCAAGTCTTCGC +
Preference number: 4 (lower is better)
Translates to: SFRRVGSTSSFSWGSIHKWGSGT*RNSSLR
Trigger: GCGAAGACTTGAGTTCCTCCAAGTCCCAGAACCCCA...CTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGCGGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp AGCTCTGGCCAAAGCTGTCCACATGGTCTGTTGGCTCAGCTAATTCCTGGATGCCCATTCTTGGGGTTCTaGGACTTGGAGGAACTCAAG +
Preference number: 4 (lower is better)
Translates to: SSGQSCPHGLLAQLIPGCPFLGF*DLEELK
Trigger: CTTGAGTTCCTCCAAGTCCCAGAACCCCAAGAATGG...GCATCCAGGAATTAGCTGAGCCAACAGACCATGTGGACAGCTTTGGCCAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp AGCTCTGGCCAAAGCTGTCCACATGGTCTGTTGGCTCAGCTAATTCCTGGATGCAGCAGACTGAGGCATTaGGTCTCGATAAGACTGCAC +
Preference number: 4 (lower is better)
Translates to: SSGQSCPHGLLAQLIPGCSRLRH*VSIRLH
Trigger: GTGCAGTCTTATCGAGACCCAATGCCTCAGTCTGCT...GCATCCAGGAATTAGCTGAGCCAACAGACCATGTGGACAGCTTTGGCCAGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp CCCATTCTTGGGGTTCTGGGACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAACTGGGTCACACCCTCTaGCCAACCTTCTGGGACAGA +
Preference number: 4 (lower is better)
Translates to: PILGVLGLGGTQVFAVRKLGHTL*PTFWDR
Trigger: TCTGTCCCAGAAGGTTGGCCAGAGGGTGTGACCCAG...TTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGTCCCAGAACCCCAAGAATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp GCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGACCCGACTGGAAGGGTaGGGGTTAAAGGGTAACTGG +
Preference number: 4 (lower is better)
Translates to: AGLVRPLPFPGVQYTRYVTRLEG*GLKGNW
Trigger: CCAGTTACCCTTTAACCCCCACCCTTCCAGTCGGGT...CACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp CCCAACCATGGACTTCAACACATGACAGACAGCCAAGATCACGTTGCTGTTGTTGAGCCAGAAATCCCTTaGGCATCCCAAGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PNHGLQHMTDSQDHVAVVEPEIP*ASQGQE
Trigger: CTCCTGGCCTTGGGATGCCCAAGGGATTTCTGGCTC...AACAACAGCAACGTGATCTTGGCTGTCTGTCATGTGTTGAAGTCCATGGTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp CCCATTCTTGGGGTTCTGGGACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAACATCCCCCAGAGAGCTaGGTCTATGCTGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: PILGVLGLGGTQVFAVRKHPPES*VYAELL
Trigger: CAGGAGCTCAGCATAGACCCAGCTCTCTGGGGGATG...TTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGTCCCAGAACCCCAAGAATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp ACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAATCCCTCCAGGACAACAAACTCCTGAGCCAGGTGGCTaGGTCACTGTGGCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: TWRNSSLRCKKIPPGQQTPEPGG*VTVAPR
Trigger: TCTGGGAGCCACAGTGACCCAGCCACCTGGCTCAGG...AGTTTGTTGTCCTGGAGGGATTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR TCA 90 bp ACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAATCCCTCCAGGACAACAAACTGACGCTGGCGTACTCTaGGAAGGACGGCTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: TWRNSSLRCKKIPPGQQTDAGVL*EGRLRL
Trigger: AAGCCTGAGCCGTCCTTCTCAGAGTACGCCAGCGTC...AGTTTGTTGTCCTGGAGGGATTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR TCA 90 bp GCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGAGGGAGTGGCTGACCTaGTCCTTCTTGCCCATTCTT +
Preference number: 4 (lower is better)
Translates to: AGLVRPLPFPGVQYTRYVREWLT*SFLPIL
Trigger: AAGAATGGGCAAGAAGGATCAGGTCAGCCACTCCCT...CACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR TCA 90 bp GCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGCTACTTTTACAGCCTaGGCCAGAAATCCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: AGLVRPLPFPGVQYTRYVATFTA*ARNPLG
Trigger: GCCCAAGGGATTTCTGGCTCAGGCTGTAAAAGTAGC...CACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR TCA 90 bp CCCAACCATGGACTTCAACACATGACAGACAGCCAAGATCACGTTGCTGTTGTTGAGCTGGGTCTATGCTaGGCTCCTGCAGTTTCACCT +
Preference number: 4 (lower is better)
Translates to: PNHGLQHMTDSQDHVAVVELGLC*APAVSP
Trigger: AGGTGAAACTGCAGGAGCTCAGCATAGACCCAGCTC...AACAACAGCAACGTGATCTTGGCTGTCTGTCATGTGTTGAAGTCCATGGTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR TCA 90 bp CCCAACCATGGACTTCAACACATGACAGACAGCCAAGATCACGTTGCTGTTGTTAATTTGGAACTAGCCTaGGCCAGGTGGCTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: PNHGLQHMTDSQDHVAVVNLELA*ARWLGH
Trigger: GTGACCCAGCCACCTGGCTCAGGCTAGTTCCAAATT...AACAACAGCAACGTGATCTTGGCTGTCTGTCATGTGTTGAAGTCCATGGTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR GCA 90 bp CCCAACCATGGACTTCAACACATGACAGACAGCCAAGATCACGTTGCTGTTGTTGGCTGTCTCTCCAGCTaGAACCAACACGGACTTGTC +
Preference number: 4 (lower is better)
Translates to: PNHGLQHMTDSQDHVAVVGCLSS*NQHGLV
Trigger: GACAAGTCCGTGTTGGTTGCAGCTGGAGAGACAGCC...AACAACAGCAACGTGATCTTGGCTGTCTGTCATGTGTTGAAGTCCATGGTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR GCA 90 bp GAGGTGCTGTTTGAACTCCCACAGCTACAAAGCAGCAGAGCCGAGATCCAAACTTCTATGCTGAGCTCCTaGAGTTTCACCTGTAGGACC +
Preference number: 4 (lower is better)
Translates to: EVLFELPQLQSSRAEIQTSMLSS*SFTCRT
Trigger: GGTCCTACAGGTGAAACTGCAGGAGCTCAGCATAGA...AGTTTGGATCTCGGCTCTGCTGCTTTGTAGCTGTGGGAGTTCAAACAGCACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR GCA 90 bp AGCTCTGGCCAAAGCTGTCCACATGGTCTGTTGGCTCAGCTAATTCCTGGATGCGTGTGCACACGTATGTaGTGTCTCTGGGTAAAAGAG +
Preference number: 4 (lower is better)
Translates to: SSGQSCPHGLLAQLIPGCVCTRM*CLWVKE
Trigger: CTCTTTTACCCAGAGACAGCACATACGTGTGCACAC...GCATCCAGGAATTAGCTGAGCCAACAGACCATGTGGACAGCTTTGGCCAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR GCA 90 bp GAGGTGCTGTTTGAACTCCCACAGCTACAAAGCAGCAGAGCCGAGATCCAAACTAAACTCCTGAAACCATaGTCCTTCCGCAGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: EVLFELPQLQSSRAEIQTKLLKP*SFRRVG
Trigger: ACCAACCCTGCGGAAGGAGCATGGTTTCAGGAGTTT...AGTTTGGATCTCGGCTCTGCTGCTTTGTAGCTGTGGGAGTTCAAACAGCACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR CCA 90 bp CCCAACCATGGACTTCAACACATGACAGACAGCCAAGATCACGTTGCTGTTGTTTCTAGAAGGGAGAGATaGGTCCGGGTGGAGCAACAC +
Preference number: 4 (lower is better)
Translates to: PNHGLQHMTDSQDHVAVVSRRER*VRVEQH
Trigger: GTGTTGCTCCACCCGGACCCATCTCTCCCTTCTAGA...AACAACAGCAACGTGATCTTGGCTGTCTGTCATGTGTTGAAGTCCATGGTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp CCCAACCATGGACTTCAACACATGACAGACAGCCAAGATCACGTTGCTGTTGTTGCTCAGCTGAGAACATaGCCAAGTCAGTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: PNHGLQHMTDSQDHVAVVAQLRT*PSQSQP
Trigger: TGGCTGGGACTGACTTGGCCATGTTCTCAGCTGAGC...AACAACAGCAACGTGATCTTGGCTGTCTGTCATGTGTTGAAGTCCATGGTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp GAGGTGCTGTTTGAACTCCCACAGCTACAAAGCAGCAGAGCCGAGATCCAAACTAGCAGACTGAGGCATTaGGTCTCGATAAGACTGCAC +
Preference number: 4 (lower is better)
Translates to: EVLFELPQLQSSRAEIQTSRLRH*VSIRLH
Trigger: GTGCAGTCTTATCGAGACCCAATGCCTCAGTCTGCT...AGTTTGGATCTCGGCTCTGCTGCTTTGTAGCTGTGGGAGTTCAAACAGCACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR CCA 90 bp ACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAATCCCTCCAGGACAACAAACTCTCAGAAAGCCGGGATaGGGGCGGTCACTAAAGGGG +
Preference number: 4 (lower is better)
Translates to: TWRNSSLRCKKIPPGQQTLRKPG*GRSLKG
Trigger: CCCCTTTAGTGACCGCCCCCATCCCGGCTTTCTGAG...AGTTTGTTGTCCTGGAGGGATTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp GGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGATTCATCCCCCAGAGAGCTaGGTCTATGCTGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: GWFDLFLFLGFNTQGMWIHPPES*VYAELL
Trigger: CAGGAGCTCAGCATAGACCCAGCTCTCTGGGGGATG...AATCCACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp TCCTGCAGTTTCACCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTTTAGATGTCTGCATTTaGTGGGGAAGGAAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: SCSFTCRTSRNGQDGSATLDVCI*WGRKVR
Trigger: CCTCACTTTCCTTCCCCACCAAATGCAGACATCTAA...AGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGGTGAAACTGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR TCA 90 bp CCCAACCATGGACTTCAACACATGACAGACAGCCAAGATCACGTTGCTGTTGTTAGGGAGTGGCTGACCTaGTCCTTCTTGCCCATTCTT +
Preference number: 4 (lower is better)
Translates to: PNHGLQHMTDSQDHVAVVREWLT*SFLPIL
Trigger: AAGAATGGGCAAGAAGGATCAGGTCAGCCACTCCCT...AACAACAGCAACGTGATCTTGGCTGTCTGTCATGTGTTGAAGTCCATGGTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR TCA 90 bp ACTTTACGGATGAGCAGACTGAGGCATTGGGTCTCGATAAGACTGCACTGTCAAGCTACTTTTACAGCCTaGGCCAGAAATCCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: TLRMSRLRHWVSIRLHCQATFTA*ARNPLG
Trigger: GCCCAAGGGATTTCTGGCTCAGGCTGTAAAAGTAGC...TTGACAGTGCAGTCTTATCGAGACCCAATGCCTCAGTCTGCTCATCCGTAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR TCA 90 bp CCCATTCTTGGGGTTCTGGGACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAAGCTACTTTTACAGCCTaGGCCAGAAATCCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: PILGVLGLGGTQVFAVRKATFTA*ARNPLG
Trigger: GCCCAAGGGATTTCTGGCTCAGGCTGTAAAAGTAGC...TTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGTCCCAGAACCCCAAGAATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR TCA 90 bp CCCAACCATGGACTTCAACACATGACAGACAGCCAAGATCACGTTGCTGTTGTTATTGAAATCACCAGGTaGCCATCCCCCAGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: PNHGLQHMTDSQDHVAVVIEITR*PSPREL
Trigger: CAGCTCTCTGGGGGATGGTCACCTGGTGATTTCAAT...AACAACAGCAACGTGATCTTGGCTGTCTGTCATGTGTTGAAGTCCATGGTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR TCA 90 bp CCCATTCTTGGGGTTCTGGGACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAAATTGAAATCACCAGGTaGCCATCCCCCAGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: PILGVLGLGGTQVFAVRKIEITR*PSPREL
Trigger: CAGCTCTCTGGGGGATGGTCACCTGGTGATTTCAAT...TTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGTCCCAGAACCCCAAGAATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR GCA 90 bp GAGGTGCTGTTTGAACTCCCACAGCTACAAAGCAGCAGAGCCGAGATCCAAACTGTGTGCACACGTATGTaGTGTCTCTGGGTAAAAGAG +
Preference number: 4 (lower is better)
Translates to: EVLFELPQLQSSRAEIQTVCTRM*CLWVKE
Trigger: CTCTTTTACCCAGAGACAGCACATACGTGTGCACAC...AGTTTGGATCTCGGCTCTGCTGCTTTGTAGCTGTGGGAGTTCAAACAGCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR CCA 90 bp TCCTTCCGCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGAAGAAGTGGAGCCCTaGGCTTTCTTCTGTCTGATT +
Preference number: 4 (lower is better)
Translates to: SFRRVGSTSSFSWGSIHKEEVEP*AFFCLI
Trigger: AATCAGACAGAAGAAAGCCCAGGGCTCCACTTCTTC...CTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGCGGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp CCCAACCATGGACTTCAACACATGACAGACAGCCAAGATCACGTTGCTGTTGTTTGGGGTTCTGGGACTTaGAGGAACTCAAGTCTTCGC +
Preference number: 4 (lower is better)
Translates to: PNHGLQHMTDSQDHVAVVWGSGT*RNSSLR
Trigger: GCGAAGACTTGAGTTCCTCCAAGTCCCAGAACCCCA...AACAACAGCAACGTGATCTTGGCTGTCTGTCATGTGTTGAAGTCCATGGTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp CCCATTCTTGGGGTTCTGGGACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAACTTCTTGCCCATTCTTaGGGTTCTGGGACTTGGAGG +
Preference number: 4 (lower is better)
Translates to: PILGVLGLGGTQVFAVRKLLAHS*GSGTWR
Trigger: CCTCCAAGTCCCAGAACCCCAAGAATGGGCAAGAAG...TTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGTCCCAGAACCCCAAGAATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp ACTTTACGGATGAGCAGACTGAGGCATTGGGTCTCGATAAGACTGCACTGTCAAGCTTATGAGAGGTGGTaGGGAGGGGTGTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: TLRMSRLRHWVSIRLHCQAYERW*GGVSSS
Trigger: TGAAGATGACACCCCTCCCCACCACCTCTCATAAGC...TTGACAGTGCAGTCTTATCGAGACCCAATGCCTCAGTCTGCTCATCCGTAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp CTGGGACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAATCCCTCCAGGACAACGCTGCACCATCCCCCTaGCTGTCTTCAATTTATTCC +
Preference number: 4 (lower is better)
Translates to: LGLGGTQVFAVRKSLQDNAAPSP*LSSIYS
Trigger: GGAATAAATTGAAGACAGCCAGGGGGATGGTGCAGC...GTTGTCCTGGAGGGATTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGTCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp ACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAATCCCTCCAGGACAACAAACTCTCTGGCCAACCTTCTaGGACAGAGGGGGAATCAGC +
Preference number: 4 (lower is better)
Translates to: TWRNSSLRCKKIPPGQQTLWPTF*DRGGIS
Trigger: GCTGATTCCCCCTCTGTCCCAGAAGGTTGGCCAGAG...AGTTTGTTGTCCTGGAGGGATTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp CCCATTCTTGGGGTTCTGGGACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAAGGGTTAAAGGGTAACTaGGTCACACCCTCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: PILGVLGLGGTQVFAVRKGLKGN*VTPSGQ
Trigger: TTGGCCAGAGGGTGTGACCCAGTTACCCTTTAACCC...TTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGTCCCAGAACCCCAAGAATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp TACGTCTCTAAAACCTACGTGAGGGGCTCAAATGCTGTAGGTTGTTTCCAAACCACCCGACTGGAAGGGTaGGGGTTAAAGGGTAACTGG +
Preference number: 4 (lower is better)
Translates to: YVSKTYVRGSNAVGCFQTTRLEG*GLKGNW
Trigger: CCAGTTACCCTTTAACCCCCACCCTTCCAGTCGGGT...GGTTTGGAAACAACCTACAGCATTTGAGCCCCTCACGTAGGTTTTAGAGACGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR CCA 90 bp ACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAATCCCTCCAGGACAACAAACTCATCCCCCAGAGAGCTaGGTCTATGCTGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: TWRNSSLRCKKIPPGQQTHPPES*VYAELL
Trigger: CAGGAGCTCAGCATAGACCCAGCTCTCTGGGGGATG...AGTTTGTTGTCCTGGAGGGATTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp TGTTTCCAAACCCTGGGGTCCATTCAATCCTCTTCCAGGCTTTGGCAGGAGGGCGGCTCAGCTAATTCCTaGATGCCATCATTGAAATCA +
Preference number: 4 (lower is better)
Translates to: CFQTLGSIQSSSRLWQEGGSANS*MPSLKS
Trigger: TGATTTCAATGATGGCATCCAGGAATTAGCTGAGCC...GCCCTCCTGCCAAAGCCTGGAAGAGGATTGAATGGACCCCAGGGTTTGGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR CCA 90 bp AGCTCTGGCCAAAGCTGTCCACATGGTCTGTTGGCTCAGCTAATTCCTGGATGCAATACACAAGGTATGTaGATTCTCCAGGTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SSGQSCPHGLLAQLIPGCNTQGM*ILQVAR
Trigger: CCTGGCAACCTGGAGAATCCACATACCTTGTGTATT...GCATCCAGGAATTAGCTGAGCCAACAGACCATGTGGACAGCTTTGGCCAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp CCCATTCTTGGGGTTCTGGGACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAACTCCTTCCGCAGGGTTaGTTCGACCTCTTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: PILGVLGLGGTQVFAVRKLLPQG*FDLFLF
Trigger: GAAAAGGAAGAGGTCGAACCAACCCTGCGGAAGGAG...TTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGTCCCAGAACCCCAAGAATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR TCA 90 bp TCCTGCAGTTTCACCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTAGTTATAGTGAAGACTaGATAAATAGGGCTTGCGAC +
Preference number: 4 (lower is better)
Translates to: SCSFTCRTSRNGQDGSATSYSED*INRACD
Trigger: GTCGCAAGCCCTATTTATTCAGTCTTCACTATAACT...AGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGGTGAAACTGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR TCA 90 bp CCCATTCTTGGGGTTCTGGGACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAACAAGGCCAGGAGTCATaGACATTAGCGTCTCAACTC +
Preference number: 4 (lower is better)
Translates to: PILGVLGLGGTQVFAVRKQGQES*TLASQL
Trigger: GAGTTGAGACGCTAATGTTCATGACTCCTGGCCTTG...TTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGTCCCAGAACCCCAAGAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR TCA 90 bp CCCATTCTTGGGGTTCTGGGACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAACCTGGATGCCATCATTaGAATCACCAGGTGACCATC +
Preference number: 4 (lower is better)
Translates to: PILGVLGLGGTQVFAVRKPGCHH*NHQVTI
Trigger: GATGGTCACCTGGTGATTTCAATGATGGCATCCAGG...TTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGTCCCAGAACCCCAAGAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR TCA 90 bp CCCATTCTTGGGGTTCTGGGACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAATACACCGGCTCCTTCTaGGCCAGGGCAAACAAAAAT +
Preference number: 4 (lower is better)
Translates to: PILGVLGLGGTQVFAVRKYTGSF*ARANKN
Trigger: ATTTTTGTTTGCCCTGGCTCAGAAGGAGCCGGTGTA...TTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGTCCCAGAACCCCAAGAATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR GCA 90 bp ACTTTACGGATGAGCAGACTGAGGCATTGGGTCTCGATAAGACTGCACTGTCAATCTATGCTGAGCTCCTaGAGTTTCACCTGTAGGACC +
Preference number: 4 (lower is better)
Translates to: TLRMSRLRHWVSIRLHCQSMLSS*SFTCRT
Trigger: GGTCCTACAGGTGAAACTGCAGGAGCTCAGCATAGA...TTGACAGTGCAGTCTTATCGAGACCCAATGCCTCAGTCTGCTCATCCGTAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp CTGGGACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAATCCCTCCAGGACAACGAAGAAGTGGAGCCCTaGGCTTTCTTCTGTCTGATT +
Preference number: 4 (lower is better)
Translates to: LGLGGTQVFAVRKSLQDNEEVEP*AFFCLI
Trigger: AATCAGACAGAAGAAAGCCCAGGGCTCCACTTCTTC...GTTGTCCTGGAGGGATTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGTCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp CCCATTCTTGGGGTTCTGGGACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAAAGCAGACTGAGGCATTaGGTCTCGATAAGACTGCAC +
Preference number: 4 (lower is better)
Translates to: PILGVLGLGGTQVFAVRKSRLRH*VSIRLH
Trigger: GTGCAGTCTTATCGAGACCCAATGCCTCAGTCTGCT...TTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGTCCCAGAACCCCAAGAATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp TACGTCTCTAAAACCTACGTGAGGGGCTCAAATGCTGTAGGTTGTTTCCAAACCGCTTATGAGAGGTGGTaGGGAGGGGTGTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: YVSKTYVRGSNAVGCFQTAYERW*GGVSSS
Trigger: TGAAGATGACACCCCTCCCCACCACCTCTCATAAGC...GGTTTGGAAACAACCTACAGCATTTGAGCCCCTCACGTAGGTTTTAGAGACGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR CCA 90 bp GGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGATTGGGTTAAAGGGTAACTaGGTCACACCCTCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: GWFDLFLFLGFNTQGMWIGLKGN*VTPSGQ
Trigger: TTGGCCAGAGGGTGTGACCCAGTTACCCTTTAACCC...AATCCACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp ACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAATCCCTCCAGGACAACAAACTACCCGACTGGAAGGGTaGGGGTTAAAGGGTAACTGG +
Preference number: 4 (lower is better)
Translates to: TWRNSSLRCKKIPPGQQTTRLEG*GLKGNW
Trigger: CCAGTTACCCTTTAACCCCCACCCTTCCAGTCGGGT...AGTTTGTTGTCCTGGAGGGATTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp CCCATTCTTGGGGTTCTGGGACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAACAGGAATGGGCAGGATaGCTCAGCTACTTTTACAGC +
Preference number: 4 (lower is better)
Translates to: PILGVLGLGGTQVFAVRKQEWAG*LSYFYS
Trigger: GCTGTAAAAGTAGCTGAGCCATCCTGCCCATTCCTG...TTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGTCCCAGAACCCCAAGAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp CTGGGACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAATCCCTCCAGGACAACCCAAAGCTGTCCACATaGTCTGTTGGCTCAGCTAAT +
Preference number: 4 (lower is better)
Translates to: LGLGGTQVFAVRKSLQDNPKLST*SVGSAN
Trigger: ATTAGCTGAGCCAACAGACCATGTGGACAGCTTTGG...GTTGTCCTGGAGGGATTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGTCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp GCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGCCAAAGCTGTCCACATaGTCTGTTGGCTCAGCTAAT +
Preference number: 4 (lower is better)
Translates to: AGLVRPLPFPGVQYTRYVPKLST*SVGSAN
Trigger: ATTAGCTGAGCCAACAGACCATGTGGACAGCTTTGG...CACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp CCCATTCTTGGGGTTCTGGGACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAACGTATGTGCTGTCTCTaGGTAAAAGAGAGGGAGACG +
Preference number: 4 (lower is better)
Translates to: PILGVLGLGGTQVFAVRKRMCCL*VKERET
Trigger: CGTCTCCCTCTCTTTTACCCAGAGACAGCACATACG...TTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGTCCCAGAACCCCAAGAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp ACTTTACGGATGAGCAGACTGAGGCATTGGGTCTCGATAAGACTGCACTGTCAACGTATGTGCTGTCTCTaGGTAAAAGAGAGGGAGACG +
Preference number: 4 (lower is better)
Translates to: TLRMSRLRHWVSIRLHCQRMCCL*VKERET
Trigger: CGTCTCCCTCTCTTTTACCCAGAGACAGCACATACG...TTGACAGTGCAGTCTTATCGAGACCCAATGCCTCAGTCTGCTCATCCGTAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR CAA 72 bp AAAAGAGAGGGAGACGAAGGTTTACAAGCCAATCTTTaGGAATTTGGAACTAGCCTGAGCCAGGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: KREGDEGLQANL*EFGTSLSQVAG
Trigger: CCCAGCCACCTGGCTCAGGCTAGTTCCAAATTCCAAAAGATTGGCTTGTAAACCTTCGTCTCCCTCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR TCA 90 bp TACGTCTCTAAAACCTACGTGAGGGGCTCAAATGCTGTAGGTTGTTTCCAAACCCAAGGCCAGGAGTCATaGACATTAGCGTCTCAACTC +
Preference number: 4 (lower is better)
Translates to: YVSKTYVRGSNAVGCFQTQGQES*TLASQL
Trigger: GAGTTGAGACGCTAATGTTCATGACTCCTGGCCTTG...GGTTTGGAAACAACCTACAGCATTTGAGCCCCTCACGTAGGTTTTAGAGACGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR TCA 90 bp TACGTCTCTAAAACCTACGTGAGGGGCTCAAATGCTGTAGGTTGTTTCCAAACCTACACCGGCTCCTTCTaGGCCAGGGCAAACAAAAAT +
Preference number: 4 (lower is better)
Translates to: YVSKTYVRGSNAVGCFQTYTGSF*ARANKN
Trigger: ATTTTTGTTTGCCCTGGCTCAGAAGGAGCCGGTGTA...GGTTTGGAAACAACCTACAGCATTTGAGCCCCTCACGTAGGTTTTAGAGACGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR TCA 90 bp CCCAACCATGGACTTCAACACATGACAGACAGCCAAGATCACGTTGCTGTTGTTCAAAGAGGTGCTGTTTaGACTCCCACAGCTACAAAG +
Preference number: 4 (lower is better)
Translates to: PNHGLQHMTDSQDHVAVVQRGAV*TPTATK
Trigger: CTTTGTAGCTGTGGGAGTTCAAACAGCACCTCTTTG...AACAACAGCAACGTGATCTTGGCTGTCTGTCATGTGTTGAAGTCCATGGTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR GCA 90 bp AGCTCTGGCCAAAGCTGTCCACATGGTCTGTTGGCTCAGCTAATTCCTGGATGCCCTCAGTTTCAAGATTaGACGTTTCACATTTCTCAG +
Preference number: 4 (lower is better)
Translates to: SSGQSCPHGLLAQLIPGCPQFQD*TFHISQ
Trigger: CTGAGAAATGTGAAACGTGCAATCTTGAAACTGAGG...GCATCCAGGAATTAGCTGAGCCAACAGACCATGTGGACAGCTTTGGCCAGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR GCA 90 bp CCCAACCATGGACTTCAACACATGACAGACAGCCAAGATCACGTTGCTGTTGTTGTGGATTCTCCAGGTTaGCAGGCTAAAGCTAAAGCT +
Preference number: 4 (lower is better)
Translates to: PNHGLQHMTDSQDHVAVVVDSPG*QAKAKA
Trigger: AGCTTTAGCTTTAGCCTGGCAACCTGGAGAATCCAC...AACAACAGCAACGTGATCTTGGCTGTCTGTCATGTGTTGAAGTCCATGGTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR GCA 90 bp ACTTTACGGATGAGCAGACTGAGGCATTGGGTCTCGATAAGACTGCACTGTCAAGTGGATTCTCCAGGTTaGCAGGCTAAAGCTAAAGCT +
Preference number: 4 (lower is better)
Translates to: TLRMSRLRHWVSIRLHCQVDSPG*QAKAKA
Trigger: AGCTTTAGCTTTAGCCTGGCAACCTGGAGAATCCAC...TTGACAGTGCAGTCTTATCGAGACCCAATGCCTCAGTCTGCTCATCCGTAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp ACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAATCCCTCCAGGACAACAAACTTGGGGTTCTGGGACTTaGAGGAACTCAAGTCTTCGC +
Preference number: 4 (lower is better)
Translates to: TWRNSSLRCKKIPPGQQTWGSGT*RNSSLR
Trigger: GCGAAGACTTGAGTTCCTCCAAGTCCCAGAACCCCA...AGTTTGTTGTCCTGGAGGGATTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp ACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAATCCCTCCAGGACAACAAACTAGTGCTTATGAGAGGTaGTGGGGAGGGGTGTCATCT +
Preference number: 4 (lower is better)
Translates to: TWRNSSLRCKKIPPGQQTSAYER*WGGVSS
Trigger: AGATGACACCCCTCCCCACCACCTCTCATAAGCACT...AGTTTGTTGTCCTGGAGGGATTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp TCCTTCCGCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGGCTCAGCTAATTCCTaGATGCCATCATTGAAATCA +
Preference number: 4 (lower is better)
Translates to: SFRRVGSTSSFSWGSIHKGSANS*MPSLKS
Trigger: TGATTTCAATGATGGCATCCAGGAATTAGCTGAGCC...CTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGCGGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp GAGGTGCTGTTTGAACTCCCACAGCTACAAAGCAGCAGAGCCGAGATCCAAACTACCTCTTCCTTTTCCTaGGGTTCAATACACAAGGTA +
Preference number: 4 (lower is better)
Translates to: EVLFELPQLQSSRAEIQTTSSFS*GSIHKV
Trigger: TACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGT...AGTTTGGATCTCGGCTCTGCTGCTTTGTAGCTGTGGGAGTTCAAACAGCACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR CCA 90 bp GCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGTTGTTTCCAAACCCTaGGGTCCATTCAATCCTCTT +
Preference number: 4 (lower is better)
Translates to: AGLVRPLPFPGVQYTRYVVVSKP*GPFNPL
Trigger: AAGAGGATTGAATGGACCCCAGGGTTTGGAAACAAC...CACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR CCA 90 bp ACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAATCCCTCCAGGACAACAAACTGATGTCTGCATTTGGTaGGGAAGGAAAGTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: TWRNSSLRCKKIPPGQQTDVCIW*GRKVRP
Trigger: GGGCCTCACTTTCCTTCCCCACCAAATGCAGACATC...AGTTTGTTGTCCTGGAGGGATTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR GCA 90 bp GGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGATTCGTGAGGGGCTCAAATaGTGTAGGTTGTTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: GWFDLFLFLGFNTQGMWIREGLK*CRLFPN
Trigger: GTTTGGAAACAACCTACAGCATTTGAGCCCCTCACG...AATCCACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR GCA 90 bp CTGGGACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAATCCCTCCAGGACAACCAAGCATTAGATGTCTaGATTTGGTGGGGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: LGLGGTQVFAVRKSLQDNQALDV*IWWGRK
Trigger: TTTCCTTCCCCACCAAATGCAGACATCTAATGCTTG...GTTGTCCTGGAGGGATTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGTCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR CCA 90 bp ACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAATCCCTCCAGGACAACAAACTCCATTCTTGGGGTTCTaGGACTTGGAGGAACTCAAG +
Preference number: 4 (lower is better)
Translates to: TWRNSSLRCKKIPPGQQTPFLGF*DLEELK
Trigger: CTTGAGTTCCTCCAAGTCCCAGAACCCCAAGAATGG...AGTTTGTTGTCCTGGAGGGATTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp ACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAATCCCTCCAGGACAACAAACTGCTGCACCATCCCCCTaGCTGTCTTCAATTTATTCC +
Preference number: 4 (lower is better)
Translates to: TWRNSSLRCKKIPPGQQTAAPSP*LSSIYS
Trigger: GGAATAAATTGAAGACAGCCAGGGGGATGGTGCAGC...AGTTTGTTGTCCTGGAGGGATTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp GGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGATTCCAAAGCTGTCCACATaGTCTGTTGGCTCAGCTAAT +
Preference number: 4 (lower is better)
Translates to: GWFDLFLFLGFNTQGMWIPKLST*SVGSAN
Trigger: ATTAGCTGAGCCAACAGACCATGTGGACAGCTTTGG...AATCCACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp CCCAACCATGGACTTCAACACATGACAGACAGCCAAGATCACGTTGCTGTTGTTTTAGATGTCTGCATTTaGTGGGGAAGGAAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: PNHGLQHMTDSQDHVAVVLDVCI*WGRKVR
Trigger: CCTCACTTTCCTTCCCCACCAAATGCAGACATCTAA...AACAACAGCAACGTGATCTTGGCTGTCTGTCATGTGTTGAAGTCCATGGTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR TCA 90 bp GCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGAGTTATAGTGAAGACTaGATAAATAGGGCTTGCGAC +
Preference number: 4 (lower is better)
Translates to: AGLVRPLPFPGVQYTRYVSYSED*INRACD
Trigger: GTCGCAAGCCCTATTTATTCAGTCTTCACTATAACT...CACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp CCCATTCTTGGGGTTCTGGGACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAAGGCTCAGCTAATTCCTaGATGCCATCATTGAAATCA +
Preference number: 4 (lower is better)
Translates to: PILGVLGLGGTQVFAVRKGSANS*MPSLKS
Trigger: TGATTTCAATGATGGCATCCAGGAATTAGCTGAGCC...TTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGTCCCAGAACCCCAAGAATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp CCCAACCATGGACTTCAACACATGACAGACAGCCAAGATCACGTTGCTGTTGTTGGCTCAGCTAATTCCTaGATGCCATCATTGAAATCA +
Preference number: 4 (lower is better)
Translates to: PNHGLQHMTDSQDHVAVVGSANS*MPSLKS
Trigger: TGATTTCAATGATGGCATCCAGGAATTAGCTGAGCC...AACAACAGCAACGTGATCTTGGCTGTCTGTCATGTGTTGAAGTCCATGGTTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp GGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGATTAATACACAAGGTATGTaGATTCTCCAGGTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: GWFDLFLFLGFNTQGMWINTQGM*ILQVAR
Trigger: CCTGGCAACCTGGAGAATCCACATACCTTGTGTATT...AATCCACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp CCCAACCATGGACTTCAACACATGACAGACAGCCAAGATCACGTTGCTGTTGTTCAACTATATACAAAATaGGGCCTGTTTCCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: PNHGLQHMTDSQDHVAVVQLYTK*GLFPSQ
Trigger: CTGGGAAGGAAACAGGCCCCATTTTGTATATAGTTG...AACAACAGCAACGTGATCTTGGCTGTCTGTCATGTGTTGAAGTCCATGGTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp CCCATTCTTGGGGTTCTGGGACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAACAACTATATACAAAATaGGGCCTGTTTCCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: PILGVLGLGGTQVFAVRKQLYTK*GLFPSQ
Trigger: CTGGGAAGGAAACAGGCCCCATTTTGTATATAGTTG...TTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGTCCCAGAACCCCAAGAATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR TCA 90 bp TACGTCTCTAAAACCTACGTGAGGGGCTCAAATGCTGTAGGTTGTTTCCAAACCCAAAGACAAGAATACTaGACACCGGAAGGACTCATT +
Preference number: 4 (lower is better)
Translates to: YVSKTYVRGSNAVGCFQTQRQEY*TPEGLI
Trigger: AATGAGTCCTTCCGGTGTTCAGTATTCTTGTCTTTG...GGTTTGGAAACAACCTACAGCATTTGAGCCCCTCACGTAGGTTTTAGAGACGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR GCA 90 bp CCCAACCATGGACTTCAACACATGACAGACAGCCAAGATCACGTTGCTGTTGTTCCTCAGTTTCAAGATTaGACGTTTCACATTTCTCAG +
Preference number: 4 (lower is better)
Translates to: PNHGLQHMTDSQDHVAVVPQFQD*TFHISQ
Trigger: CTGAGAAATGTGAAACGTGCAATCTTGAAACTGAGG...AACAACAGCAACGTGATCTTGGCTGTCTGTCATGTGTTGAAGTCCATGGTTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp ACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAATCCCTCCAGGACAACAAACTAATACACAAGGTATGTaGATTCTCCAGGTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: TWRNSSLRCKKIPPGQQTNTQGM*ILQVAR
Trigger: CCTGGCAACCTGGAGAATCCACATACCTTGTGTATT...AGTTTGTTGTCCTGGAGGGATTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp GGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGATTACCTCTTCCTTTTCCTaGGGTTCAATACACAAGGTA +
Preference number: 4 (lower is better)
Translates to: GWFDLFLFLGFNTQGMWITSSFS*GSIHKV
Trigger: TACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGT...AATCCACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CCA 90 bp GGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGATTCAACTATATACAAAATaGGGCCTGTTTCCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: GWFDLFLFLGFNTQGMWIQLYTK*GLFPSQ
Trigger: CTGGGAAGGAAACAGGCCCCATTTTGTATATAGTTG...AATCCACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
3UTR CAA 72 bp CAGCTACAAAGCAGCAGAGCCGAGATCCAAACTCAGTaGTCTATATGGAATTTTATCTCAACCTTACACCGG +
Preference number: 4 (lower is better)
Translates to: QLQSSRAEIQTQ*SIWNFISTLHR
Trigger: CCGGTGTAAGGTTGAGATAAAATTCCATATAGACAACTGAGTTTGGATCTCGGCTCTGCTGCTTTGTAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR TCA 90 bp ACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAATCCCTCCAGGACAACAAACTCAAAGACAAGAATACTaGACACCGGAAGGACTCATT +
Preference number: 4 (lower is better)
Translates to: TWRNSSLRCKKIPPGQQTQRQEY*TPEGLI
Trigger: AATGAGTCCTTCCGGTGTTCAGTATTCTTGTCTTTG...AGTTTGTTGTCCTGGAGGGATTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR TCA 90 bp ACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAATCCCTCCAGGACAACAAACTAGTTATAGTGAAGACTaGATAAATAGGGCTTGCGAC +
Preference number: 4 (lower is better)
Translates to: TWRNSSLRCKKIPPGQQTSYSED*INRACD
Trigger: GTCGCAAGCCCTATTTATTCAGTCTTCACTATAACT...AGTTTGTTGTCCTGGAGGGATTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CAA 90 bp TACCACAGCGGGGTCACAGAAGGCTGCACTACCAGCCGCGTGGCTCAGCTGAGAGCTTGCGACATCTGCTaGCCCTGGGCCCGGTCAGGC +
Preference number: 5 (lower is better)
Translates to: YHSGVTEGCTTSRVAQLRACDIC*PWARSG
Trigger: GCCTGACCGGGCCCAGGGCAAGCAGATGTCGCAAGC...TCTCAGCTGAGCCACGCGGCTGGTAGTGCAGCCTTCTGTGACCCCGCTGTGGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CAA 90 bp TGTTTCCAAACCCTGGGGTCCATTCAATCCTCTTCCAGGCTTTGGCAGGAGGGCGCTTGCGACATCTGCTaGCCCTGGGCCCGGTCAGGC +
Preference number: 5 (lower is better)
Translates to: CFQTLGSIQSSSRLWQEGACDIC*PWARSG
Trigger: GCCTGACCGGGCCCAGGGCAAGCAGATGTCGCAAGC...GCCCTCCTGCCAAAGCCTGGAAGAGGATTGAATGGACCCCAGGGTTTGGAAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR CAA 90 bp AGCTCTGGCCAAAGCTGTCCACATGGTCTGTTGGCTCAGCTAATTCCTGGATGCGCTTGCGACATCTGCTaGCCCTGGGCCCGGTCAGGC +
Preference number: 5 (lower is better)
Translates to: SSGQSCPHGLLAQLIPGCACDIC*PWARSG
Trigger: GCCTGACCGGGCCCAGGGCAAGCAGATGTCGCAAGC...GCATCCAGGAATTAGCTGAGCCAACAGACCATGTGGACAGCTTTGGCCAGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CAA 90 bp TACCACAGCGGGGTCACAGAAGGCTGCACTACCAGCCGCGTGGCTCAGCTGAGAGAGCAGACTGAGGCATaGGGTCTCGATAAGACTGCA +
Preference number: 5 (lower is better)
Translates to: YHSGVTEGCTTSRVAQLREQTEA*GLDKTA
Trigger: TGCAGTCTTATCGAGACCCAATGCCTCAGTCTGCTC...TCTCAGCTGAGCCACGCGGCTGGTAGTGCAGCCTTCTGTGACCCCGCTGTGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CAA 90 bp ACTTTACGGATGAGCAGACTGAGGCATTGGGTCTCGATAAGACTGCACTGTCAAGCTTGCGACATCTGCTaGCCCTGGGCCCGGTCAGGC +
Preference number: 5 (lower is better)
Translates to: TLRMSRLRHWVSIRLHCQACDIC*PWARSG
Trigger: GCCTGACCGGGCCCAGGGCAAGCAGATGTCGCAAGC...TTGACAGTGCAGTCTTATCGAGACCCAATGCCTCAGTCTGCTCATCCGTAAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CAA 90 bp TACCACAGCGGGGTCACAGAAGGCTGCACTACCAGCCGCGTGGCTCAGCTGAGATCCTGGATGCCATCATaGAAATCACCAGGTGACCAT +
Preference number: 5 (lower is better)
Translates to: YHSGVTEGCTTSRVAQLRSWMPS*KSPGDH
Trigger: ATGGTCACCTGGTGATTTCAATGATGGCATCCAGGA...TCTCAGCTGAGCCACGCGGCTGGTAGTGCAGCCTTCTGTGACCCCGCTGTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CAA 90 bp CCCATCAGTGGTGAGAGGCCACGAGACTCAGCTATGCAGGGTCAGGGCAGGAAGCTCAAATGCTGTAGGTaGTTTCCAAACCCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: PISGERPRDSAMQGQGRKLKCCR*FPNPGV
Trigger: GACCCCAGGGTTTGGAAACAACCTACAGCATTTGAG...CTTCCTGCCCTGACCCTGCATAGCTGAGTCTCGTGGCCTCTCACCACTGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR CAA 90 bp TGGGCCCGGTCAGGCCCTCACACCCGACTGGAAGGGTGGGGGTTAAAGGGTAACTTACAAGCCAATCTTTaGGAATTTGGAACTAGCCTG +
Preference number: 5 (lower is better)
Translates to: WARSGPHTRLEGWGLKGNLQANL*EFGTSL
Trigger: CAGGCTAGTTCCAAATTCCAAAAGATTGGCTTGTAA...GTTACCCTTTAACCCCCACCCTTCCAGTCGGGTGTGAGGGCCTGACCGGGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CAA 90 bp AGCTCTGGCCAAAGCTGTCCACATGGTCTGTTGGCTCAGCTAATTCCTGGATGCGCTCCTTCCGCAGGGTaGGTTCGACCTCTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: SSGQSCPHGLLAQLIPGCAPSAG*VRPLPF
Trigger: AAAAGGAAGAGGTCGAACCAACCCTGCGGAAGGAGC...GCATCCAGGAATTAGCTGAGCCAACAGACCATGTGGACAGCTTTGGCCAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CAA 90 bp TGGGCCCGGTCAGGCCCTCACACCCGACTGGAAGGGTGGGGGTTAAAGGGTAACCAGGGCAAACAAAAATaGTACGTCTCTAAAACCTAC +
Preference number: 5 (lower is better)
Translates to: WARSGPHTRLEGWGLKGNQGKQK*YVSKTY
Trigger: GTAGGTTTTAGAGACGTACAATTTTTGTTTGCCCTG...GTTACCCTTTAACCCCCACCCTTCCAGTCGGGTGTGAGGGCCTGACCGGGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR CAA 90 bp TACCACAGCGGGGTCACAGAAGGCTGCACTACCAGCCGCGTGGCTCAGCTGAGATCAATTTATTCCAGTTaGATCCCAGTAGGGTTTGAG +
Preference number: 5 (lower is better)
Translates to: YHSGVTEGCTTSRVAQLRSIYSS*IPVGFE
Trigger: CTCAAACCCTACTGGGATCAAACTGGAATAAATTGA...TCTCAGCTGAGCCACGCGGCTGGTAGTGCAGCCTTCTGTGACCCCGCTGTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CAA 90 bp TGTTTCCAAACCCTGGGGTCCATTCAATCCTCTTCCAGGCTTTGGCAGGAGGGCTGTCCACATGGTCTGTaGGCTCAGCTAATTCCTGGA +
Preference number: 5 (lower is better)
Translates to: CFQTLGSIQSSSRLWQEGCPHGL*AQLIPG
Trigger: TCCAGGAATTAGCTGAGCCAACAGACCATGTGGACA...GCCCTCCTGCCAAAGCCTGGAAGAGGATTGAATGGACCCCAGGGTTTGGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR CAA 90 bp TACCACAGCGGGGTCACAGAAGGCTGCACTACCAGCCGCGTGGCTCAGCTGAGATTACAAGCCAATCTTTaGGAATTTGGAACTAGCCTG +
Preference number: 5 (lower is better)
Translates to: YHSGVTEGCTTSRVAQLRLQANL*EFGTSL
Trigger: CAGGCTAGTTCCAAATTCCAAAAGATTGGCTTGTAA...TCTCAGCTGAGCCACGCGGCTGGTAGTGCAGCCTTCTGTGACCCCGCTGTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CAA 90 bp CCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTTTTACAGCCTGAGTCCTGGATGCCATCATaGAAATCACCAGGTGACCAT +
Preference number: 5 (lower is better)
Translates to: PVGPPGMGRMAQLLLQPESWMPS*KSPGDH
Trigger: ATGGTCACCTGGTGATTTCAATGATGGCATCCAGGA...CTCAGGCTGTAAAAGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CAA 90 bp AGCTCTGGCCAAAGCTGTCCACATGGTCTGTTGGCTCAGCTAATTCCTGGATGCTGTCCACATGGTCTGTaGGCTCAGCTAATTCCTGGA +
Preference number: 5 (lower is better)
Translates to: SSGQSCPHGLLAQLIPGCCPHGL*AQLIPG
Trigger: TCCAGGAATTAGCTGAGCCAACAGACCATGTGGACA...GCATCCAGGAATTAGCTGAGCCAACAGACCATGTGGACAGCTTTGGCCAGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CAA 90 bp CTGGGACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAATCCCTCCAGGACAACGAGCAGACTGAGGCATaGGGTCTCGATAAGACTGCA +
Preference number: 5 (lower is better)
Translates to: LGLGGTQVFAVRKSLQDNEQTEA*GLDKTA
Trigger: TGCAGTCTTATCGAGACCCAATGCCTCAGTCTGCTC...GTTGTCCTGGAGGGATTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CAA 90 bp AAGAGGTGCTGTTTGAACTCCCACAGCTACAAAGCAGCAGAGCCGAGATCCAAAGAGCAGACTGAGGCATaGGGTCTCGATAAGACTGCA +
Preference number: 5 (lower is better)
Translates to: KRCCLNSHSYKAAEPRSKEQTEA*GLDKTA
Trigger: TGCAGTCTTATCGAGACCCAATGCCTCAGTCTGCTC...TTTGGATCTCGGCTCTGCTGCTTTGTAGCTGTGGGAGTTCAAACAGCACCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR CAA 90 bp ACTTTACGGATGAGCAGACTGAGGCATTGGGTCTCGATAAGACTGCACTGTCAAGCTCCTTCCGCAGGGTaGGTTCGACCTCTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: TLRMSRLRHWVSIRLHCQAPSAG*VRPLPF
Trigger: AAAAGGAAGAGGTCGAACCAACCCTGCGGAAGGAGC...TTGACAGTGCAGTCTTATCGAGACCCAATGCCTCAGTCTGCTCATCCGTAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CAA 90 bp CCCATTCTTGGGGTTCTGGGACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAAGCTCCTTCCGCAGGGTaGGTTCGACCTCTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: PILGVLGLGGTQVFAVRKAPSAG*VRPLPF
Trigger: AAAAGGAAGAGGTCGAACCAACCCTGCGGAAGGAGC...TTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGTCCCAGAACCCCAAGAATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CAA 90 bp TGTTTCCAAACCCTGGGGTCCATTCAATCCTCTTCCAGGCTTTGGCAGGAGGGCATTAGATGTCTGCATTaGGTGGGGAAGGAAAGTGAG +
Preference number: 5 (lower is better)
Translates to: CFQTLGSIQSSSRLWQEGIRCLH*VGKESE
Trigger: CTCACTTTCCTTCCCCACCAAATGCAGACATCTAAT...GCCCTCCTGCCAAAGCCTGGAAGAGGATTGAATGGACCCCAGGGTTTGGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR CAA 90 bp CCCATTCTTGGGGTTCTGGGACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAAGAGCAGACTGAGGCATaGGGTCTCGATAAGACTGCA +
Preference number: 5 (lower is better)
Translates to: PILGVLGLGGTQVFAVRKEQTEA*GLDKTA
Trigger: TGCAGTCTTATCGAGACCCAATGCCTCAGTCTGCTC...TTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGTCCCAGAACCCCAAGAATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CAA 90 bp CCGGGACGCACTCACAAAGACAAGAATACTGAACACCGGAAGGACTCATTATTAGCTCCTTCCGCAGGGTaGGTTCGACCTCTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: PGRTHKDKNTEHRKDSLLAPSAG*VRPLPF
Trigger: AAAAGGAAGAGGTCGAACCAACCCTGCGGAAGGAGC...TAATAATGAGTCCTTCCGGTGTTCAGTATTCTTGTCTTTGTGAGTGCGTCCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR CAA 90 bp GCAGGGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGTCCTGGATGCCATCATaGAAATCACCAGGTGACCAT +
Preference number: 5 (lower is better)
Translates to: AGLVRPLPFPGVQYTRYVSWMPS*KSPGDH
Trigger: ATGGTCACCTGGTGATTTCAATGATGGCATCCAGGA...CACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CAA 90 bp CCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTTTTACAGCCTGAGTTACAAGCCAATCTTTaGGAATTTGGAACTAGCCTG +
Preference number: 5 (lower is better)
Translates to: PVGPPGMGRMAQLLLQPELQANL*EFGTSL
Trigger: CAGGCTAGTTCCAAATTCCAAAAGATTGGCTTGTAA...CTCAGGCTGTAAAAGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CAA 90 bp CCTGTAGGACCTCCAGGAATGGGCAGGATGGCTCAGCTACTTTTACAGCCTGAGAGCTATACATCTTCCTaGGCCTTATTCCCTTATTTC +
Preference number: 5 (lower is better)
Translates to: PVGPPGMGRMAQLLLQPESYTSS*ALFPYF
Trigger: GAAATAAGGGAATAAGGCCAAGGAAGATGTATAGCT...CTCAGGCTGTAAAAGTAGCTGAGCCATCCTGCCCATTCCTGGAGGTCCTACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CAA 90 bp AGCTCTGGCCAAAGCTGTCCACATGGTCTGTTGGCTCAGCTAATTCCTGGATGCAGCTATACATCTTCCTaGGCCTTATTCCCTTATTTC +
Preference number: 5 (lower is better)
Translates to: SSGQSCPHGLLAQLIPGCSYTSS*ALFPYF
Trigger: GAAATAAGGGAATAAGGCCAAGGAAGATGTATAGCT...GCATCCAGGAATTAGCTGAGCCAACAGACCATGTGGACAGCTTTGGCCAGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CAA 90 bp TACGTCTCTAAAACCTACGTGAGGGGCTCAAATGCTGTAGGTTGTTTCCAAACCCTCAAATGCTGTAGGTaGTTTCCAAACCCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: YVSKTYVRGSNAVGCFQTLKCCR*FPNPGV
Trigger: GACCCCAGGGTTTGGAAACAACCTACAGCATTTGAG...GGTTTGGAAACAACCTACAGCATTTGAGCCCCTCACGTAGGTTTTAGAGACGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR CAA 90 bp GAGGTGCTGTTTGAACTCCCACAGCTACAAAGCAGCAGAGCCGAGATCCAAACTACTATAAACCAGCACTaGACATCAGTCATCTGGCAA +
Preference number: 5 (lower is better)
Translates to: EVLFELPQLQSSRAEIQTTINQH*TSVIWQ
Trigger: TTGCCAGATGACTGATGTCAAGTGCTGGTTTATAGT...AGTTTGGATCTCGGCTCTGCTGCTTTGTAGCTGTGGGAGTTCAAACAGCACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR CAA 90 bp ACTTGGAGGAACTCAAGTCTTCGCTGTAAGAAAATCCCTCCAGGACAACAAACTTGTCCACATGGTCTGTaGGCTCAGCTAATTCCTGGA +
Preference number: 5 (lower is better)
Translates to: TWRNSSLRCKKIPPGQQTCPHGL*AQLIPG
Trigger: TCCAGGAATTAGCTGAGCCAACAGACCATGTGGACA...AGTTTGTTGTCCTGGAGGGATTTTCTTACAGCGAAGACTTGAGTTCCTCCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CAA 90 bp GGTTGGTTCGACCTCTTCCTTTTCCTGGGGTTCAATACACAAGGTATGTGGATTATTAGATGTCTGCATTaGGTGGGGAAGGAAAGTGAG +
Preference number: 5 (lower is better)
Translates to: GWFDLFLFLGFNTQGMWIIRCLH*VGKESE
Trigger: CTCACTTTCCTTCCCCACCAAATGCAGACATCTAAT...AATCCACATACCTTGTGTATTGAACCCCAGGAAAAGGAAGAGGTCGAACCAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4
CDS-3UTR CAA 90 bp CCCAACCATGGACTTCAACACATGACAGACAGCCAAGATCACGTTGCTGTTGTTAGCTATACATCTTCCTaGGCCTTATTCCCTTATTTC +
Preference number: 5 (lower is better)
Translates to: PNHGLQHMTDSQDHVAVVSYTSS*ALFPYF
Trigger: GAAATAAGGGAATAAGGCCAAGGAAGATGTATAGCT...AACAACAGCAACGTGATCTTGGCTGTCTGTCATGTGTTGAAGTCCATGGTTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356025.7
ENST00000358771.5
ENST00000400068.7
ENST00000622179.4
CDS-3UTR CAA 90 bp CCGGGACGCACTCACAAAGACAAGAATACTGAACACCGGAAGGACTCATTATTAACTATAAACCAGCACTaGACATCAGTCATCTGGCAA +
Preference number: 5 (lower is better)
Translates to: PGRTHKDKNTEHRKDSLLTINQH*TSVIWQ
Trigger: TTGCCAGATGACTGATGTCAAGTGCTGGTTTATAGT...TAATAATGAGTCCTTCCGGTGTTCAGTATTCTTGTCTTTGTGAGTGCGTCCCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358771.5
ENST00000622179.4