Pregenerated sensors for SINHCAF (Homo sapiens)
Ensembl gene IDs: ENSG00000139146, ENSG00000276371Ensembl transcript IDs: ENST00000448582.6, ENST00000536836.1, ENST00000543615.1, ENST00000544921.5, ENST00000617411.2, ENST00000631546.1, ENST00000632692.1, ENST00000632726.1, ENST00000633573.1
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TCTCATGCAATCTGTAGTCCCAGCTACTCGAGAGGCTCAGACGGGAGGATCACTGACGGGAGGATCACTTaGGCCCAAAAGTTCAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: SHAICSPSYSRGSDGRITDGRIT*AQKFKA Trigger: AGCCTTGAACTTTTGGGCTCAAGTGATCCTCCCGTC...AGTGATCCTCCCGTCTGAGCCTCTCGAGTAGCTGGGACTACAGATTGCATGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000544921.5 ENST00000631546.1 |
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| CDS-3UTR GCA 90 bp | TCTCATGCAATCTGTAGTCCCAGCTACTCGAGAGGCTCAGACGGGAGGATCACTAGTTCAAGGCTGTGGTaGACAATGATCACACCTGTG | + |
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Preference number: 4 (lower is better) Translates to: SHAICSPSYSRGSDGRITSSRLW*TMITPV Trigger: CACAGGTGTGATCATTGTGCACCACAGCCTTGAACT...AGTGATCCTCCCGTCTGAGCCTCTCGAGTAGCTGGGACTACAGATTGCATGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000544921.5 ENST00000631546.1 |
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| CDS-3UTR CCA 90 bp | TCTCATGCAATCTGTAGTCCCAGCTACTCGAGAGGCTCAGACGGGAGGATCACTAAAAGTTCAAGGCTGTaGTGCACAATGATCACACCT | + |
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Preference number: 4 (lower is better) Translates to: SHAICSPSYSRGSDGRITKSSRL*CTMITP Trigger: AGGTGTGATCATTGTGCACCACAGCCTTGAACTTTT...AGTGATCCTCCCGTCTGAGCCTCTCGAGTAGCTGGGACTACAGATTGCATGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000544921.5 ENST00000631546.1 |
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| CDS CCA 90 bp | CTTGAATCGAACTTATTTGCATACGGGCGCGCGCACGTTGCGGGCTaGGAGGGGGAGAAGTCCCGGCGACCGCGCGCGCTCCCGAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: LESNLFAYGRAHVAG*EGEKSRRPRALPRP Trigger: AGGCCTCGGGAGCGCGCGCGGTCGCCGGGACTTCTCCCCCTCCCAGCCCGCAACGTGCGCGCGCCCGTATGCAAATAAGTTCGATTCAAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617411.2 |
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| CDS TCA 90 bp | GAGCAAACAACGCCACGCCGCGTGCGCTCCGGCAGAGCCCAGCACTaGCCCCCAAAGGCCGATTTAAAGACCCTCGGCCGCCAGCTCGGA | + |
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Preference number: 5 (lower is better) Translates to: EQTTPRRVRSGRAQH*PPKADLKTLGRQLG Trigger: TCCGAGCTGGCGGCCGAGGGTCTTTAAATCGGCCTTTGGGGGTCAGTGCTGGGCTCTGCCGGAGCGCACGCGGCGTGGCGTTGTTTGCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000543615.1 ENST00000632726.1 |
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| CDS TCA 90 bp | CGACCGCGTGTTGCTCTCATTGTCGCATCCGCATCCCTCCGGAGTTaGGCAAACAACGCCACGCCGCGTGCGCTCCGGCAGAGCCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: RPRVALIVASASLRS*ANNATPRALRQSPA Trigger: TGCTGGGCTCTGCCGGAGCGCACGCGGCGTGGCGTTGTTTGCTCAACTCCGGAGGGATGCGGATGCGACAATGAGAGCAACACGCGGTCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000543615.1 ENST00000632726.1 |
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| CDS CCA 90 bp | AGCAAAACTTCGGGCTCCGAAAGCACCCCGGACACCAGAGGCTCTTaGGCGCGGTCCGAAGAGGGCAGGCGAGTGGAAGACGGGCTGTTT | + |
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Preference number: 5 (lower is better) Translates to: SKTSGSESTPDTRGS*ARSEEGRRVEDGLF Trigger: AAACAGCCCGTCTTCCACTCGCCTGCCCTCTTCGGACCGCGCCCAAGAGCCTCTGGTGTCCGGGGTGCTTTCGGAGCCCGAAGTTTTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000543615.1 ENST00000632726.1 |
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| CDS TCA 90 bp | CCGCTTTCCCTCTGCGCACGCGCGGCTCCCGGCACAAAATTCTCTTaGATCGAACTTATTTGCATACGGGCGCGCGCACGTTGCGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: PLSLCARAAPGTKFS*IELICIRARARCGL Trigger: CAGCCCGCAACGTGCGCGCGCCCGTATGCAAATAAGTTCGATTCAAGAGAATTTTGTGCCGGGAGCCGCGCGTGCGCAGAGGGAAAGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617411.2 |
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| CDS TCA 90 bp | GAGTTCTCTCTGCTCCACCCCACCCCCAAGCAACTTGGTGTTATATaGCCAAGACAGGCAGGCAGCTCAAGGGAAGACCTCCTGGATCGA | + |
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Preference number: 5 (lower is better) Translates to: EFSLLHPTPKQLGVI*PRQAGSSREDLLDR Trigger: TCGATCCAGGAGGTCTTCCCTTGAGCTGCCTGCCTGTCTTGGTCATATAACACCAAGTTGCTTGGGGGTGGGGTGGAGCAGAGAGAACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000448582.6 ENST00000633573.1 |
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| CDS TCA 90 bp | CTGGGCATTCACACGTGTGAGATGTGCCTCCCTCAAACCTTGTTATaGCGTCGGCACTTTACCCATGAAAAAGGGGTTGAACTGCAGACT | + |
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Preference number: 5 (lower is better) Translates to: LGIHTCEMCLPQTLL*RRHFTHEKGVELQT Trigger: AGTCTGCAGTTCAACCCCTTTTTCATGGGTAAAGTGCCGACGTCATAACAAGGTTTGAGGGAGGCACATCTCACACGTGTGAATGCCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000536836.1 ENST00000632692.1 |
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| CDS GCA 90 bp | GCGCCCTTCAATTTGCCAGCTATTTTGCCAGCTATTTACACTATGTaGCCATCCTTGAGTTGGTGGGTGTGGCCCAATGCCACATACCAA | + |
|
Preference number: 5 (lower is better) Translates to: APFNLPAILPAIYTM*PSLSWWVWPNATYQ Trigger: TTGGTATGTGGCATTGGGCCACACCCACCAACTCAAGGATGGGCACATAGTGTAAATAGCTGGCAAAATAGCTGGCAAATTGAAGGGCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000536836.1 ENST00000632692.1 |
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| CDS-3UTR CAA 90 bp | TCTCATGCAATCTGTAGTCCCAGCTACTCGAGAGGCTCAGACGGGAGGATCACTCAACATAGGAAGACATaGTCTCCAAAACAGCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: SHAICSPSYSRGSDGRITQHRKT*SPKQLW Trigger: CCAGAGCTGTTTTGGAGACAATGTCTTCCTATGTTG...AGTGATCCTCCCGTCTGAGCCTCTCGAGTAGCTGGGACTACAGATTGCATGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000544921.5 ENST00000631546.1 |
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| CDS CCA 90 bp | GTGTTATATGACCAAGACAGGCAGGCAGCTCAAGGGAAGACCTCCTaGATCGACCTCCATTCTTGGCACTATCAAGGCAAGCGTATAAAA | + |
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Preference number: 5 (lower is better) Translates to: VLYDQDRQAAQGKTS*IDLHSWHYQGKRIK Trigger: TTTTATACGCTTGCCTTGATAGTGCCAAGAATGGAGGTCGATCCAGGAGGTCTTCCCTTGAGCTGCCTGCCTGTCTTGGTCATATAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448582.6 ENST00000633573.1 |
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| CDS TCA 90 bp | ATGTTGTCAACTTCTCGTCCTGGTTTCAGGGTTGAAGCTGTTTGGTaGATCAGAGACAGGGATCTTTGGTGGGAGTCATGGTCCATTCAG | + |
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Preference number: 5 (lower is better) Translates to: MLSTSRPGFRVEAVW*IRDRDLWWESWSIQ Trigger: CTGAATGGACCATGACTCCCACCAAAGATCCCTGTCTCTGATTCACCAAACAGCTTCAACCCTGAAACCAGGACGAGAAGTTGACAACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000536836.1 ENST00000632692.1 |
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| CDS GCA 90 bp | GAATGGCCCTTGGAAGCTGGTGACAAATCCAGCAATCTGAGAGACTaGCTCCATCTGCCACACTTTAGGAGAGTTTGGCTAATGAACTAT | + |
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Preference number: 5 (lower is better) Translates to: EWPLEAGDKSSNLRD*LHLPHFRRVWLMNY Trigger: ATAGTTCATTAGCCAAACTCTCCTAAAGTGTGGCAGATGGAGGCAGTCTCTCAGATTGCTGGATTTGTCACCAGCTTCCAAGGGCCATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000536836.1 ENST00000632692.1 |
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| CDS GCA 90 bp | ATCTTTGTTGAGGGCTGTAACAAGGAACCATTAAAGAGTTCTCTCTaGTCCACCCCACCCCCAAGCAACTTGGTGTTATATGACCAAGAC | + |
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Preference number: 5 (lower is better) Translates to: IFVEGCNKEPLKSSL*STPPPSNLVLYDQD Trigger: GTCTTGGTCATATAACACCAAGTTGCTTGGGGGTGGGGTGGAGCAGAGAGAACTCTTTAATGGTTCCTTGTTACAGCCCTCAACAAAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000448582.6 ENST00000633573.1 |
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| CDS TCA 90 bp | ACTGCAGGCCTTACAAAGGCCTGCATAAGCATGATATATAACAAATaGGACGTGCTGGCACAATCTGCTTTGCTTTTTCTCCTTTGGACA | + |
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Preference number: 5 (lower is better) Translates to: TAGLTKACISMIYNK*DVLAQSALLFLLWT Trigger: TGTCCAAAGGAGAAAAAGCAAAGCAGATTGTGCCAGCACGTCTCATTTGTTATATATCATGCTTATGCAGGCCTTTGTAAGGCCTGCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000536836.1 ENST00000632692.1 |
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| CDS CCA 90 bp | AAATATAATACTCTAAGAATGTTTAGACAGGAGATCATACAGGCCTaGTCTGAAGTCTTAGGTCAATTAGCTGTCCACTCAGATGTTGTC | + |
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Preference number: 5 (lower is better) Translates to: KYNTLRMFRQEIIQA*SEVLGQLAVHSDVV Trigger: GACAACATCTGAGTGGACAGCTAATTGACCTAAGACTTCAGACCAGGCCTGTATGATCTCCTGTCTAAACATTCTTAGAGTATTATATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000536836.1 ENST00000632692.1 |
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| CDS TCA 72 bp | ACGCCACGCCGCGTGCGCTCCGGCAGAGCCCAGCACTaGCCCCCAAAGGCCGATTTAAAGACCCTCGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: TPRRVRSGRAQH*PPKADLKTLGR Trigger: GCGGCCGAGGGTCTTTAAATCGGCCTTTGGGGGTCAGTGCTGGGCTCTGCCGGAGCGCACGCGGCGTGGCGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000543615.1 ENST00000632726.1 |
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| CDS CCA 72 bp | AACTTATTTGCATACGGGCGCGCGCACGTTGCGGGCTaGGAGGGGGAGAAGTCCCGGCGACCGCGCGCGCTC | + |
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Preference number: 6 (lower is better) Translates to: NLFAYGRAHVAG*EGEKSRRPRAL Trigger: GAGCGCGCGCGGTCGCCGGGACTTCTCCCCCTCCCAGCCCGCAACGTGCGCGCGCCCGTATGCAAATAAGTT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617411.2 |
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| CDS CCA 72 bp | TCGGGCTCCGAAAGCACCCCGGACACCAGAGGCTCTTaGGCGCGGTCCGAAGAGGGCAGGCGAGTGGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: SGSESTPDTRGS*ARSEEGRRVED Trigger: GTCTTCCACTCGCCTGCCCTCTTCGGACCGCGCCCAAGAGCCTCTGGTGTCCGGGGTGCTTTCGGAGCCCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000543615.1 ENST00000632726.1 |
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| CDS CAA 90 bp | GCGACCGCGTGTTGCTCTCATTGTCGCATCCGCATCCCTCCGGAGTaGAGCAAACAACGCCACGCCGCGTGCGCTCCGGCAGAGCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: ATACCSHCRIRIPPE*SKQRHAACAPAEPS Trigger: GCTGGGCTCTGCCGGAGCGCACGCGGCGTGGCGTTGTTTGCTCAACTCCGGAGGGATGCGGATGCGACAATGAGAGCAACACGCGGTCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000543615.1 ENST00000632726.1 |
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| CDS CAA 72 bp | TTCGGGCTCCGAAAGCACCCCGGACACCAGAGGCTCTaGGGCGCGGTCCGAAGAGGGCAGGCGAGTGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: FGLRKHPGHQRL*GAVRRGQASGR Trigger: TCTTCCACTCGCCTGCCCTCTTCGGACCGCGCCCAAGAGCCTCTGGTGTCCGGGGTGCTTTCGGAGCCCGAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000543615.1 ENST00000632726.1 |
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| CDS CAA 90 bp | GAGCAAAACTTCGGGCTCCGAAAGCACCCCGGACACCAGAGGCTCTaGGGCGCGGTCCGAAGAGGGCAGGCGAGTGGAAGACGGGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: EQNFGLRKHPGHQRL*GAVRRGQASGRRAV Trigger: AACAGCCCGTCTTCCACTCGCCTGCCCTCTTCGGACCGCGCCCAAGAGCCTCTGGTGTCCGGGGTGCTTTCGGAGCCCGAAGTTTTGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000543615.1 ENST00000632726.1 |
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| CDS TCA 72 bp | GTTGCTCTCATTGTCGCATCCGCATCCCTCCGGAGTTaGGCAAACAACGCCACGCCGCGTGCGCTCCGGCAG | + |
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Preference number: 6 (lower is better) Translates to: VALIVASASLRS*ANNATPRALRQ Trigger: CTGCCGGAGCGCACGCGGCGTGGCGTTGTTTGCTCAACTCCGGAGGGATGCGGATGCGACAATGAGAGCAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000543615.1 ENST00000632726.1 |
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| CDS CAA 72 bp | TGTTGCTCTCATTGTCGCATCCGCATCCCTCCGGAGTaGAGCAAACAACGCCACGCCGCGTGCGCTCCGGCA | + |
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Preference number: 6 (lower is better) Translates to: CCSHCRIRIPPE*SKQRHAACAPA Trigger: TGCCGGAGCGCACGCGGCGTGGCGTTGTTTGCTCAACTCCGGAGGGATGCGGATGCGACAATGAGAGCAACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000543615.1 ENST00000632726.1 |
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| CDS CAA 90 bp | CGCACGCGCGGCTCCCGGCACAAAATTCTCTTGAATCGAACTTATTaGCATACGGGCGCGCGCACGTTGCGGGCTGGGAGGGGGAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: RTRGSRHKILLNRTY*HTGARTLRAGRGRS Trigger: ACTTCTCCCCCTCCCAGCCCGCAACGTGCGCGCGCCCGTATGCAAATAAGTTCGATTCAAGAGAATTTTGTGCCGGGAGCCGCGCGTGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617411.2 |
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| CDS CAA 90 bp | TCCGCTTTCCCTCTGCGCACGCGCGGCTCCCGGCACAAAATTCTCTaGAATCGAACTTATTTGCATACGGGCGCGCGCACGTTGCGGGCT | + |
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Preference number: 6 (lower is better) Translates to: SAFPLRTRGSRHKIL*NRTYLHTGARTLRA Trigger: AGCCCGCAACGTGCGCGCGCCCGTATGCAAATAAGTTCGATTCAAGAGAATTTTGTGCCGGGAGCCGCGCGTGCGCAGAGGGAAAGCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617411.2 |
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| CDS CAA 72 bp | CCTCTGCGCACGCGCGGCTCCCGGCACAAAATTCTCTaGAATCGAACTTATTTGCATACGGGCGCGCGCACG | + |
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Preference number: 6 (lower is better) Translates to: PLRTRGSRHKIL*NRTYLHTGART Trigger: CGTGCGCGCGCCCGTATGCAAATAAGTTCGATTCAAGAGAATTTTGTGCCGGGAGCCGCGCGTGCGCAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617411.2 |
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| CDS CAA 90 bp | CGAGTGGAAGACGGGCTGTTTTTAAGCGACCGCGTGTTGCTCTCATaGTCGCATCCGCATCCCTCCGGAGTTGAGCAAACAACGCCACGC | + |
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Preference number: 6 (lower is better) Translates to: RVEDGLFLSDRVLLS*SHPHPSGVEQTTPR Trigger: GCGTGGCGTTGTTTGCTCAACTCCGGAGGGATGCGGATGCGACAATGAGAGCAACACGCGGTCGCTTAAAAACAGCCCGTCTTCCACTCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000543615.1 ENST00000632726.1 |
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| CDS CAA 90 bp | GAGGGCAGGCGAGTGGAAGACGGGCTGTTTTTAAGCGACCGCGTGTaGCTCTCATTGTCGCATCCGCATCCCTCCGGAGTTGAGCAAACA | + |
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Preference number: 6 (lower is better) Translates to: EGRRVEDGLFLSDRV*LSLSHPHPSGVEQT Trigger: TGTTTGCTCAACTCCGGAGGGATGCGGATGCGACAATGAGAGCAACACGCGGTCGCTTAAAAACAGCCCGTCTTCCACTCGCCTGCCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000543615.1 ENST00000632726.1 |
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| CDS TCA 72 bp | CTCTGCGCACGCGCGGCTCCCGGCACAAAATTCTCTTaGATCGAACTTATTTGCATACGGGCGCGCGCACGT | + |
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Preference number: 6 (lower is better) Translates to: LCARAAPGTKFS*IELICIRARAR Trigger: ACGTGCGCGCGCCCGTATGCAAATAAGTTCGATTCAAGAGAATTTTGTGCCGGGAGCCGCGCGTGCGCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617411.2 |
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| CDS CAA 72 bp | GGCTCCCGGCACAAAATTCTCTTGAATCGAACTTATTaGCATACGGGCGCGCGCACGTTGCGGGCTGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: GSRHKILLNRTY*HTGARTLRAGR Trigger: CCTCCCAGCCCGCAACGTGCGCGCGCCCGTATGCAAATAAGTTCGATTCAAGAGAATTTTGTGCCGGGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617411.2 |
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| CDS TCA 72 bp | CTGCTCCACCCCACCCCCAAGCAACTTGGTGTTATATaGCCAAGACAGGCAGGCAGCTCAAGGGAAGACCTC | + |
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Preference number: 6 (lower is better) Translates to: LLHPTPKQLGVI*PRQAGSSREDL Trigger: GAGGTCTTCCCTTGAGCTGCCTGCCTGTCTTGGTCATATAACACCAAGTTGCTTGGGGGTGGGGTGGAGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000448582.6 ENST00000633573.1 |
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| CDS GCA 72 bp | GGTGTCGATGTAAGTGCAACAGGCACTGTGAGCTACTaGACAGACTCCTTGTCCCAGCTACTCGGGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: GVDVSATGTVSY*TDSLSQLLGRL Trigger: CAGCCTCCCGAGTAGCTGGGACAAGGAGTCTGTGCAGTAGCTCACAGTGCCTGTTGCACTTACATCGACACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000536836.1 ENST00000632692.1 |
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| CDS CAA 72 bp | CGAGTGGAAGACGGGCTGTTTTTAAGCGACCGCGTGTaGCTCTCATTGTCGCATCCGCATCCCTCCGGAGTT | + |
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Preference number: 6 (lower is better) Translates to: RVEDGLFLSDRV*LSLSHPHPSGV Trigger: AACTCCGGAGGGATGCGGATGCGACAATGAGAGCAACACGCGGTCGCTTAAAAACAGCCCGTCTTCCACTCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000543615.1 ENST00000632726.1 |
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| CDS CCA 72 bp | GACCAAGACAGGCAGGCAGCTCAAGGGAAGACCTCCTaGATCGACCTCCATTCTTGGCACTATCAAGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: DQDRQAAQGKTS*IDLHSWHYQGK Trigger: CTTGCCTTGATAGTGCCAAGAATGGAGGTCGATCCAGGAGGTCTTCCCTTGAGCTGCCTGCCTGTCTTGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448582.6 ENST00000633573.1 |
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| CDS CCA 72 bp | AAAGATAGTCTCCTGCAGTTCTGCAGTTGCTACCGCTaGCCGGGAAGGTGTAGATTCCGCTTTCCCTCTGCG | + |
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Preference number: 6 (lower is better) Translates to: KDSLLQFCSCYR*PGRCRFRFPSA Trigger: CGCAGAGGGAAAGCGGAATCTACACCTTCCCGGCCAGCGGTAGCAACTGCAGAACTGCAGGAGACTATCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617411.2 |
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| CDS CAA 72 bp | GACGGGCTGTTTTTAAGCGACCGCGTGTTGCTCTCATaGTCGCATCCGCATCCCTCCGGAGTTGAGCAAACA | + |
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Preference number: 6 (lower is better) Translates to: DGLFLSDRVLLS*SHPHPSGVEQT Trigger: TGTTTGCTCAACTCCGGAGGGATGCGGATGCGACAATGAGAGCAACACGCGGTCGCTTAAAAACAGCCCGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000543615.1 ENST00000632726.1 |
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| CDS CAA 90 bp | GAACCATTAAAGAGTTCTCTCTGCTCCACCCCACCCCCAAGCAACTaGGTGTTATATGACCAAGACAGGCAGGCAGCTCAAGGGAAGACC | + |
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Preference number: 6 (lower is better) Translates to: EPLKSSLCSTPPPSN*VLYDQDRQAAQGKT Trigger: GGTCTTCCCTTGAGCTGCCTGCCTGTCTTGGTCATATAACACCAAGTTGCTTGGGGGTGGGGTGGAGCAGAGAGAACTCTTTAATGGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000448582.6 ENST00000633573.1 |
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| CDS CAA 90 bp | CGTGCTGGCACAATCTGCTTTGCTTTTTCTCCTTTGGACATTCAGTaGCCAGTTATGACAGTAACGGTGGGAGGCCAGGAATGTGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: RAGTICFAFSPLDIQ*PVMTVTVGGQECAG Trigger: CCCTGCACATTCCTGGCCTCCCACCGTTACTGTCATAACTGGCAACTGAATGTCCAAAGGAGAAAAAGCAAAGCAGATTGTGCCAGCACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000536836.1 ENST00000632692.1 |
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| CDS TCA 72 bp | AATGGCCCTTGGAAGCTGGTGACAAATCCAGCAATCTaGGAGACTGCCTCCATCTGCCACACTTTAGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: NGPWKLVTNPAI*ETASICHTLGE Trigger: CTCTCCTAAAGTGTGGCAGATGGAGGCAGTCTCTCAGATTGCTGGATTTGTCACCAGCTTCCAAGGGCCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000536836.1 ENST00000632692.1 |
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| CDS GCA 72 bp | TGCAAGTCTCTACTTCACCCGAGGTGTCGATGTAAGTaGAACAGGCACTGTGAGCTACTGCACAGACTCCTT | + |
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Preference number: 6 (lower is better) Translates to: CKSLLHPRCRCK*NRHCELLHRLL Trigger: AAGGAGTCTGTGCAGTAGCTCACAGTGCCTGTTGCACTTACATCGACACCTCGGGTGAAGTAGAGACTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000536836.1 ENST00000632692.1 |
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| CDS TCA 72 bp | ACTTCTCGTCCTGGTTTCAGGGTTGAAGCTGTTTGGTaGATCAGAGACAGGGATCTTTGGTGGGAGTCATGG | + |
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Preference number: 6 (lower is better) Translates to: TSRPGFRVEAVW*IRDRDLWWESW Trigger: CCATGACTCCCACCAAAGATCCCTGTCTCTGATTCACCAAACAGCTTCAACCCTGAAACCAGGACGAGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000536836.1 ENST00000632692.1 |
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| CDS CAA 90 bp | AGCTGTCCACTCAGATGTTGTCAACTTCTCGTCCTGGTTTCAGGGTaGAAGCTGTTTGGTGAATCAGAGACAGGGATCTTTGGTGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: SCPLRCCQLLVLVSG*KLFGESETGIFGGS Trigger: ACTCCCACCAAAGATCCCTGTCTCTGATTCACCAAACAGCTTCAACCCTGAAACCAGGACGAGAAGTTGACAACATCTGAGTGGACAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000536836.1 ENST00000632692.1 |
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| CDS GCA 72 bp | TTGGAAGCTGGTGACAAATCCAGCAATCTGAGAGACTaGCTCCATCTGCCACACTTTAGGAGAGTTTGGCTA | + |
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Preference number: 6 (lower is better) Translates to: LEAGDKSSNLRD*LHLPHFRRVWL Trigger: TAGCCAAACTCTCCTAAAGTGTGGCAGATGGAGGCAGTCTCTCAGATTGCTGGATTTGTCACCAGCTTCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000536836.1 ENST00000632692.1 |
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| CDS GCA 72 bp | AATTTGCCAGCTATTTTGCCAGCTATTTACACTATGTaGCCATCCTTGAGTTGGTGGGTGTGGCCCAATGCC | + |
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Preference number: 6 (lower is better) Translates to: NLPAILPAIYTM*PSLSWWVWPNA Trigger: GGCATTGGGCCACACCCACCAACTCAAGGATGGGCACATAGTGTAAATAGCTGGCAAAATAGCTGGCAAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000536836.1 ENST00000632692.1 |
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| CDS TCA 72 bp | TCAGATGTTGTCAACTTCTCGTCCTGGTTTCAGGGTTaGAGCTGTTTGGTGAATCAGAGACAGGGATCTTTG | + |
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Preference number: 6 (lower is better) Translates to: SDVVNFSSWFQG*SCLVNQRQGSL Trigger: CAAAGATCCCTGTCTCTGATTCACCAAACAGCTTCAACCCTGAAACCAGGACGAGAAGTTGACAACATCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000536836.1 ENST00000632692.1 |
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| CDS CAA 72 bp | TGTTATGACGTCGGCACTTTACCCATGAAAAAGGGGTaGAACTGCAGACTGGAAGAAATAGGAAGCCAATTA | + |
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Preference number: 6 (lower is better) Translates to: CYDVGTLPMKKG*NCRLEEIGSQL Trigger: TAATTGGCTTCCTATTTCTTCCAGTCTGCAGTTCAACCCCTTTTTCATGGGTAAAGTGCCGACGTCATAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000536836.1 ENST00000632692.1 |
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| CDS TCA 72 bp | GCTAATGAACTATTTTTCCATCCCCAGCAGAGACCCTaGAAAGTCAAGTGTATATACATAGGTGGCCATCAT | + |
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Preference number: 6 (lower is better) Translates to: ANELFFHPQQRP*KVKCIYIGGHH Trigger: ATGATGGCCACCTATGTATATACACTTGACTTTTCAGGGTCTCTGCTGGGGATGGAAAAATAGTTCATTAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000536836.1 ENST00000632692.1 |
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| CDS CAA 90 bp | CTCAAACCTTGTTATGACGTCGGCACTTTACCCATGAAAAAGGGGTaGAACTGCAGACTGGAAGAAATAGGAAGCCAATTAAATAGATCA | + |
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Preference number: 6 (lower is better) Translates to: LKPCYDVGTLPMKKG*NCRLEEIGSQLNRS Trigger: TGATCTATTTAATTGGCTTCCTATTTCTTCCAGTCTGCAGTTCAACCCCTTTTTCATGGGTAAAGTGCCGACGTCATAACAAGGTTTGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000536836.1 ENST00000632692.1 |
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| CDS TCA 72 bp | CTTACAAAGGCCTGCATAAGCATGATATATAACAAATaGGACGTGCTGGCACAATCTGCTTTGCTTTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LTKACISMIYNK*DVLAQSALLFL Trigger: GAGAAAAAGCAAAGCAGATTGTGCCAGCACGTCTCATTTGTTATATATCATGCTTATGCAGGCCTTTGTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000536836.1 ENST00000632692.1 |
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| CDS CAA 72 bp | AGTAGGATAGAGACTATATCAAGGTTTGAGATCCTTTaGTCATTTGTAAGTGTGATGACTGGGCATTCACAC | + |
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Preference number: 6 (lower is better) Translates to: SRIETISRFEIL*SFVSVMTGHSH Trigger: GTGTGAATGCCCAGTCATCACACTTACAAATGACAAAAGGATCTCAAACCTTGATATAGTCTCTATCCTACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000536836.1 ENST00000632692.1 |
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| CDS TCA 72 bp | TACAGAAACATTAACCAGGTTATATATCCTATAATCTaGGTCAAAGCAGACAAGGCCAATAGTCCCCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: YRNINQVIYPII*VKADKANSPQS Trigger: ACTTTGGGGACTATTGGCCTTGTCTGCTTTGACTCAGATTATAGGATATATAACCTGGTTAATGTTTCTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000536836.1 ENST00000632692.1 |
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