RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SIN3A (Homo sapiens)

Ensembl gene IDs: ENSG00000169375

Ensembl transcript IDs: ENST00000360439.8, ENST00000394947.8, ENST00000394949.8, ENST00000562776.5, ENST00000564778.5, ENST00000565264.1, ENST00000566640.1, ENST00000567289.5, ENST00000568190.1, ENST00000568309.5, ENST00000568431.5, ENST00000568919.1, ENST00000570115.5, ENST00000570124.1

Found 835 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACCAGCCACACACAGGTCAGGTGGCCATGTCCCAGAGAGGCCCAGTaGGGCTTGAAAGGCATCTTCCTTGTTTCTTCAGTGTGTGAGTGC +
Preference number: 1 (lower is better)
Translates to: TSHTQVRWPCPREAQ*GLKGIFLVSSVCEC
Trigger: GCACTCACACACTGAAGAAACAAGGAAGATGCCTTTCAAGCCTCACTGGGCCTCTCTGGGACATGGCCACCTGACCTGTGTGTGGCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
3UTR TCA 90 bp GGCCCAGTGAGGCTTGAAAGGCATCTTCCTTGTTTCTTCAGTGTGTaGGTGCATAGGCCCACACACACATCCCCACACACACCCCAAGTT +
Preference number: 1 (lower is better)
Translates to: GPVRLERHLPCFFSV*VHRPTHTSPHTPQV
Trigger: AACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCTATGCACTCACACACTGAAGAAACAAGGAAGATGCCTTTCAAGCCTCACTGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
3UTR GCA 90 bp CCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATaGATCTCCATCCAGTCAAAGTGTGAACAGCATCCGGTTCCCTCA +
Preference number: 1 (lower is better)
Translates to: PIHLSIKSFSSLFCK*ISIQSKCEQHPVPS
Trigger: TGAGGGAACCGGATGCTGTTCACACTTTGACTGGATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
3UTR GCA 90 bp AGCAAACATAAAACACACAGAACATTGCTGGTTACAACTAAGACTTaGGTAATGGTTGCTGAAGAAAAATCCACCAGAGTACTGGGAGGG +
Preference number: 1 (lower is better)
Translates to: SKHKTHRTLLVTTKT*VMVAEEKSTRVLGG
Trigger: CCCTCCCAGTACTCTGGTGGATTTTTCTTCAGCAACCATTACGCAAGTCTTAGTTGTAACCAGCAATGTTCTGTGTGTTTTATGTTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394947.8
3UTR CCA 90 bp CATATACTTATACCAAAGAGTCCTGTGAGGAAGGTGGGTAAAAACTaGTGTTGTGCTTTGATAGGGTTGATTGAAAAAGGCTATAGAAAT +
Preference number: 1 (lower is better)
Translates to: HILIPKSPVRKVGKN*CCALIGLIEKGYRN
Trigger: ATTTCTATAGCCTTTTTCAATCAACCCTATCAAAGCACAACACCAGTTTTTACCCACCTTCCTCACAGGACTCTTTGGTATAAGTATATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000567289.5
3UTR TCA 90 bp TACAGTCCACAAACATTTGAGTATATTCTTCTCTGGATCAGGCACTaGTGCCAAGATAGGAAACATAAGCAAATTTCACAAAACAAAAAC +
Preference number: 1 (lower is better)
Translates to: YSPQTFEYILLWIRH*CQDRKHKQISQNKN
Trigger: GTTTTTGTTTTGTGAAATTTGCTTATGTTTCCTATCTTGGCATCAGTGCCTGATCCAGAGAAGAATATACTCAAATGTTTGTGGACTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567289.5
3UTR-3UTR TCA 90 bp CCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCCCCAGAGAGGCCCAGTaGGGCTTGAAAGGCATCTTC +
Preference number: 2 (lower is better)
Translates to: PQETPVLALLVCASKLHVPREAQ*GLKGIF
Trigger: GAAGATGCCTTTCAAGCCTCACTGGGCCTCTCTGGG...GACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
3UTR-3UTR GCA 90 bp CAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTCACTTGGTGCCAGGCTaGACCAGCCACACACAGGTC +
Preference number: 2 (lower is better)
Translates to: QETPVLALLVCASKLHVFHLVPG*TSHTQV
Trigger: GACCTGTGTGTGGCTGGTGCAGCCTGGCACCAAGTG...AAAGACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
3UTR-3UTR GCA 90 bp CACAAAGCTCTTTTTGGCACCCTACACTTTGGCTCACAGTCTCTTCTCCCCAGTCACTTGGTGCCAGGCTaGACCAGCCACACACAGGTC +
Preference number: 2 (lower is better)
Translates to: HKALFGTLHFGSQSLLPSHLVPG*TSHTQV
Trigger: GACCTGTGTGTGGCTGGTGCAGCCTGGCACCAAGTG...ACTGGGGAGAAGAGACTGTGAGCCAAAGTGTAGGGTGCCAAAAAGAGCTTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394947.8
3UTR-3UTR GCA 90 bp GCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCACTTGGTGCCAGGCTaGACCAGCCACACACAGGTC +
Preference number: 2 (lower is better)
Translates to: ALLVCASKLHVFACMDFLHLVPG*TSHTQV
Trigger: GACCTGTGTGTGGCTGGTGCAGCCTGGCACCAAGTG...AAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
3UTR-3UTR CCA 90 bp CAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTCACACACAGGTCAGGTaGCCATGTCCCAGAGAGGCC +
Preference number: 2 (lower is better)
Translates to: QETPVLALLVCASKLHVFHTQVR*PCPREA
Trigger: GGCCTCTCTGGGACATGGCCACCTGACCTGTGTGTG...AAAGACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
3UTR-3UTR TCA 90 bp CTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCAGAGAGGCCCAGTaGGGCTTGAAAGGCATCTTC +
Preference number: 2 (lower is better)
Translates to: LCWCVQANCMSLLAWTSFPREAQ*GLKGIF
Trigger: GAAGATGCCTTTCAAGCCTCACTGGGCCTCTCTGGG...GAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
3UTR-3UTR TCA 90 bp CCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTGTTTCTTCAGTGTGTaGGTGCATAGGCCCACACAC +
Preference number: 2 (lower is better)
Translates to: PQETPVLALLVCASKLHVCFFSV*VHRPTH
Trigger: GTGTGTGGGCCTATGCACTCACACACTGAAGAAACA...GACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
3UTR-3UTR TCA 90 bp GTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGGGAGGCCCAGTGAGGCTTaGAAGGCATCTTCCTTGTTT +
Preference number: 2 (lower is better)
Translates to: VCKQTACLCLHGLPSPPGRPSEA*KASSLF
Trigger: AAACAAGGAAGATGCCTTTCAAGCCTCACTGGGCCT...CCCTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
3UTR-3UTR TCA 90 bp AGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATAGGCCCAGTGAGGCTTaGAAGGCATCTTCCTTGTTT +
Preference number: 2 (lower is better)
Translates to: RPQETPVLALLVCASKLHRPSEA*KASSLF
Trigger: AAACAAGGAAGATGCCTTTCAAGCCTCACTGGGCCT...ATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
3UTR-3UTR CCA 90 bp CAGGCTGTAGGTAAAACTTACTCTTTTGTTGGTTGCACTGGTGGGTTGGGACTTCACACACAGGTCAGGTaGCCATGTCCCAGAGAGGCC +
Preference number: 2 (lower is better)
Translates to: QAVGKTYSFVGCTGGLGLHTQVR*PCPREA
Trigger: GGCCTCTCTGGGACATGGCCACCTGACCTGTGTGTG...AAGTCCCAACCCACCAGTGCAACCAACAAAAGAGTAAGTTTTACCTACAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394947.8
3UTR-3UTR TCA 90 bp CAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTTGTTTCTTCAGTGTGTaGGTGCATAGGCCCACACAC +
Preference number: 2 (lower is better)
Translates to: QETPVLALLVCASKLHVFCFFSV*VHRPTH
Trigger: GTGTGTGGGCCTATGCACTCACACACTGAAGAAACA...AAAGACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
3UTR-3UTR TCA 90 bp AAAATTGTGTGTGTGTGTGCGTGTGTGTGTCAGAGAGTAAAGCTGGTGGATGGCCATCCAGTCAAAGTGTaGACAGCATCCGGTTCCCTC +
Preference number: 2 (lower is better)
Translates to: KIVCVCACVCQRVKLVDGHPVKV*TASGSL
Trigger: GAGGGAACCGGATGCTGTTCACACTTTGACTGGATG...GCCATCCACCAGCTTTACTCTCTGACACACACACGCACACACACACACAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
3UTR-3UTR CCA 90 bp CAGGCTGTAGGTAAAACTTACTCTTTTGTTGGTTGCACTGGTGGGTTGGGACTTTGCAGGCAAGTGCTCTaGACAAAACACTGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: QAVGKTYSFVGCTGGLGLCRQVL*TKHCRG
Trigger: GCCCCTGCAGTGTTTTGTCCAGAGCACTTGCCTGCA...AAGTCCCAACCCACCAGTGCAACCAACAAAAGAGTAAGTTTTACCTACAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000394947.8
3UTR-3UTR TCA 90 bp AAAAGGACAACTGATTTGAACTCGTTGAGGTTGAGAACCAGAGGAGAGAAAAGGCCCAGAGAGGCCCAGTaGGGCTTGAAAGGCATCTTC +
Preference number: 2 (lower is better)
Translates to: KRTTDLNSLRLRTRGEKRPREAQ*GLKGIF
Trigger: GAAGATGCCTTTCAAGCCTCACTGGGCCTCTCTGGG...CCTTTTCTCTCCTCTGGTTCTCAACCTCAACGAGTTCAAATCAGTTGTCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
3UTR-3UTR GCA 90 bp CAGGCTGTAGGTAAAACTTACTCTTTTGTTGGTTGCACTGGTGGGTTGGGACTTCGCCAAGTCAGACACTaGCCCAGCTTTGCCCTAAAA +
Preference number: 2 (lower is better)
Translates to: QAVGKTYSFVGCTGGLGLRQVRH*PSFALK
Trigger: TTTTAGGGCAAAGCTGGGGCAGTGTCTGACTTGGCG...AAGTCCCAACCCACCAGTGCAACCAACAAAAGAGTAAGTTTTACCTACAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394947.8
3UTR-3UTR CCA 90 bp CTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCCATCCAGTCACACACACAGGTCAGGTaGCCATGTCCCAGAGAGGCC +
Preference number: 2 (lower is better)
Translates to: LSIKSFSSLFCKCISIQSHTQVR*PCPREA
Trigger: GGCCTCTCTGGGACATGGCCACCTGACCTGTGTGTG...TGACTGGATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
3UTR CAA 90 bp CAGGCTGTAGGTAAAACTTACTCTTTTGTTGGTTGCACTGGTGGGTaGGGACTTTCTCCTGAACTGGCCTTGAAATCCTATCCTGACCTG +
Preference number: 2 (lower is better)
Translates to: QAVGKTYSFVGCTGG*GLSPELALKSYPDL
Trigger: CAGGTCAGGATAGGATTTCAAGGCCAGTTCAGGAGAAAGTCCCAACCCACCAGTGCAACCAACAAAAGAGTAAGTTTTACCTACAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394947.8
3UTR-3UTR TCA 90 bp TGCATCTCCATCCAGTCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTTGTTTCTTCAGTGTGTaGGTGCATAGGCCCACACAC +
Preference number: 2 (lower is better)
Translates to: CISIQSKCEQHPVPSLKVCFFSV*VHRPTH
Trigger: GTGTGTGGGCCTATGCACTCACACACTGAAGAAACA...AACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGACTGGATGGAGATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
3UTR-3UTR GCA 90 bp TGCATCTCCATCCAGTCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTCTGCATGTCTTTGCTTaGATGGACTTCCTTCCCCTC +
Preference number: 2 (lower is better)
Translates to: CISIQSKCEQHPVPSLKVLHVFA*MDFLPL
Trigger: GAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAG...AACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGACTGGATGGAGATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
3UTR-3UTR TCA 90 bp AAAAGGACAACTGATTTGAACTCGTTGAGGTTGAGAACCAGAGGAGAGAAAAGGCATCCAGTCAAAGTGTaGACAGCATCCGGTTCCCTC +
Preference number: 2 (lower is better)
Translates to: KRTTDLNSLRLRTRGEKRHPVKV*TASGSL
Trigger: GAGGGAACCGGATGCTGTTCACACTTTGACTGGATG...CCTTTTCTCTCCTCTGGTTCTCAACCTCAACGAGTTCAAATCAGTTGTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
3UTR-3UTR GCA 90 bp TCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTAGGCCACAGGAGACTTGTGTGCAAGCAAACTaGATGTCTTTGCTTGCATGG +
Preference number: 2 (lower is better)
Translates to: SKCEQHPVPSLKVRPQETCVQAN*MSLLAW
Trigger: CCATGCAAGCAAAGACATGCAGTTTGCTTGCACACA...AGTCTCCTGTGGCCTAACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
3UTR-3UTR TCA 90 bp CCTAACTCTATCTATGACTCACTCTATAACCCCAAATCCAAAACCTTTCCTTGTAGAACATTACAGGCATaGGCTGGGCATAGTGGCTCG +
Preference number: 2 (lower is better)
Translates to: PNSIYDSLYNPKSKTFPCRTLQA*AGHSGS
Trigger: CGAGCCACTATGCCCAGCTCATGCCTGTAATGTTCT...ACAAGGAAAGGTTTTGGATTTGGGGTTATAGAGTGAGTCATAGATAGAGTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567289.5
3UTR-3UTR GCA 90 bp CTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCCATCCAGTCACTGCATGTCTTTGCTTaGATGGACTTCCTTCCCCTC +
Preference number: 2 (lower is better)
Translates to: LSIKSFSSLFCKCISIQSLHVFA*MDFLPL
Trigger: GAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAG...TGACTGGATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
3UTR-3UTR GCA 90 bp TTTGCCCTAAAATCTCATCCCACAAAGCTCTTTTTGGCACCCTACACTTTGGCTCAAACTGCATGTCTTTaGTTGCATGGACTTCCTTCC +
Preference number: 2 (lower is better)
Translates to: FALKSHPTKLFLAPYTLAQTACL*LHGLPS
Trigger: GGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTG...AGCCAAAGTGTAGGGTGCCAAAAAGAGCTTTGTGGGATGAGATTTTAGGGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394947.8
3UTR-3UTR CCA 90 bp ATACCAAAGAGTCCTGTGAGGAAGGTGGGTAAAAACTGGTGTTGTGCTTTGATATTTCGAAGGCCAAGATaGGAGAATCACTTGAGGCCA +
Preference number: 2 (lower is better)
Translates to: IPKSPVRKVGKNWCCALIFRRPR*ENHLRP
Trigger: TGGCCTCAAGTGATTCTCCCATCTTGGCCTTCGAAA...TATCAAAGCACAACACCAGTTTTTACCCACCTTCCTCACAGGACTCTTTGGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567289.5
3UTR-3UTR TCA 90 bp TTTGCCCTAAAATCTCATCCCACAAAGCTCTTTTTGGCACCCTACACTTTGGCTGCTAAAAAGGACAACTaGTTTGAACTCGTTGAGGTT +
Preference number: 2 (lower is better)
Translates to: FALKSHPTKLFLAPYTLAAKKDN*FELVEV
Trigger: AACCTCAACGAGTTCAAATCAGTTGTCCTTTTTAGC...AGCCAAAGTGTAGGGTGCCAAAAAGAGCTTTGTGGGATGAGATTTTAGGGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000394947.8
3UTR-3UTR GCA 90 bp GTACATCTGTTCATAGGTACTAAATCTGAAGCCACAGTACTATGGTACACAAGAAGCTCTGCTGGTGTGTaGAAGCAAACTGCATGTCTT +
Preference number: 2 (lower is better)
Translates to: VHLFIGTKSEATVLWYTRSSAGV*KQTACL
Trigger: AAGACATGCAGTTTGCTTGCACACACCAGCAGAGCT...TCTTGTGTACCATAGTACTGTGGCTTCAGATTTAGTACCTATGAACAGATGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360439.8
ENST00000394947.8
3UTR-3UTR GCA 90 bp ATACCAAAGAGTCCTGTGAGGAAGGTGGGTAAAAACTGGTGTTGTGCTTTGATATCACTTCTCCAGGGATaGCTCATGAATTTCAAAGCA +
Preference number: 2 (lower is better)
Translates to: IPKSPVRKVGKNWCCALISLLQG*LMNFKA
Trigger: TGCTTTGAAATTCATGAGGCATCCCTGGAGAAGTGA...TATCAAAGCACAACACCAGTTTTTACCCACCTTCCTCACAGGACTCTTTGGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567289.5
3UTR-3UTR TCA 90 bp AAGAATCCACACCAACGAGGGCAGGGATCAAGAAGAACTAAAGTAAGTATCAGGATGGACTTGATGATGTaGGTCAATTCAGCTATTCAT +
Preference number: 2 (lower is better)
Translates to: KNPHQRGQGSRRTKVSIRMDLMM*VNSAIH
Trigger: ATGAATAGCTGAATTGACTCACATCATCAAGTCCAT...CCTGATACTTACTTTAGTTCTTCTTGATCCCTGCCCTCGTTGGTGTGGATTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567289.5
3UTR-3UTR TCA 90 bp AAGAATCCACACCAACGAGGGCAGGGATCAAGAAGAACTAAAGTAAGTATCAGGAGAAAAATTGAAACCTaGACACTTGCTGCAACAATC +
Preference number: 2 (lower is better)
Translates to: KNPHQRGQGSRRTKVSIRRKIET*TLAATI
Trigger: GATTGTTGCAGCAAGTGTTCAGGTTTCAATTTTTCT...CCTGATACTTACTTTAGTTCTTCTTGATCCCTGCCCTCGTTGGTGTGGATTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567289.5
3UTR-3UTR GCA 90 bp GTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCCAAACTGCATGTCTTTaGTTGCATGGACTTCCTTCC +
Preference number: 2 (lower is better)
Translates to: VPIHLSIKSFSSLFCKCIQTACL*LHGLPS
Trigger: GGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTG...GATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
3UTR-3UTR TCA 90 bp CAATTTACTGTACTAACCTGTAGCCAATCATATATGTGCTCAATAGAGAGTTCACTCTGGATCAGGCACTaGTGCCAAGATAGGAAACAT +
Preference number: 2 (lower is better)
Translates to: QFTVLTCSQSYMCSIESSLWIRH*CQDRKH
Trigger: ATGTTTCCTATCTTGGCATCAGTGCCTGATCCAGAG...TGAACTCTCTATTGAGCACATATATGATTGGCTACAGGTTAGTACAGTAAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567289.5
3UTR-3UTR TCA 90 bp ATACCAAAGAGTCCTGTGAGGAAGGTGGGTAAAAACTGGTGTTGTGCTTTGATAAATCCTGATAACATTTaGCCGACATGCATTCATACA +
Preference number: 2 (lower is better)
Translates to: IPKSPVRKVGKNWCCALINPDNI*PTCIHT
Trigger: TGTATGAATGCATGTCGGTCAAATGTTATCAGGATT...TATCAAAGCACAACACCAGTTTTTACCCACCTTCCTCACAGGACTCTTTGGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567289.5
3UTR-3UTR GCA 90 bp AAGAATCCACACCAACGAGGGCAGGGATCAAGAAGAACTAAAGTAAGTATCAGGGAAGAAACAACTATTTaGTGCATATGGATATGTCCT +
Preference number: 2 (lower is better)
Translates to: KNPHQRGQGSRRTKVSIREETTI*CIWICP
Trigger: AGGACATATCCATATGCAGCAAATAGTTGTTTCTTC...CCTGATACTTACTTTAGTTCTTCTTGATCCCTGCCCTCGTTGGTGTGGATTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567289.5
3UTR-3UTR GCA 90 bp GTTTCTACCCTGGATAAGGAACTGAAGTCAAAATCCCTGCTTCACAGTATTTTCAGTCTGTTTTGTAAATaGATCTCCATCCAGTCAAAG +
Preference number: 2 (lower is better)
Translates to: VSTLDKELKSKSLLHSIFSLFCK*ISIQSK
Trigger: CTTTGACTGGATGGAGATGCATTTACAAAACAGACT...GAAAATACTGTGAAGCAGGGATTTTGACTTCAGTTCCTTATCCAGGGTAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394947.8
3UTR-3UTR CCA 90 bp AGAAATCCTAACTCTATCTATGACTCACTCTATAACCCCAAATCCAAAACCTTTAGATACAAGGTTAGCTaGGAACACAAGCTTCACTTC +
Preference number: 2 (lower is better)
Translates to: RNPNSIYDSLYNPKSKTFRYKVS*EHKLHF
Trigger: GAAGTGAAGCTTGTGTTCCCAGCTAACCTTGTATCT...AAAGGTTTTGGATTTGGGGTTATAGAGTGAGTCATAGATAGAGTTAGGATTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567289.5
3UTR-3UTR TCA 90 bp AGAAATCCTAACTCTATCTATGACTCACTCTATAACCCCAAATCCAAAACCTTTCAGTCCACAAACATTTaGGTATATTCTTCTCTGGAT +
Preference number: 2 (lower is better)
Translates to: RNPNSIYDSLYNPKSKTFQSTNI*VYSSLD
Trigger: ATCCAGAGAAGAATATACTCAAATGTTTGTGGACTG...AAAGGTTTTGGATTTGGGGTTATAGAGTGAGTCATAGATAGAGTTAGGATTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567289.5
3UTR TCA 72 bp GCACTGGTGGGTTGGGACTTTCTCCTGAACTGGCCTTaGAATCCTATCCTGACCTGCAGGCAAGTGCTCTGG +
Preference number: 3 (lower is better)
Translates to: ALVGWDFLLNWP*NPILTCRQVLW
Trigger: CCAGAGCACTTGCCTGCAGGTCAGGATAGGATTTCAAGGCCAGTTCAGGAGAAAGTCCCAACCCACCAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394947.8
3UTR TCA 72 bp ACACAGGTCAGGTGGCCATGTCCCAGAGAGGCCCAGTaGGGCTTGAAAGGCATCTTCCTTGTTTCTTCAGTG +
Preference number: 3 (lower is better)
Translates to: TQVRWPCPREAQ*GLKGIFLVSSV
Trigger: CACTGAAGAAACAAGGAAGATGCCTTTCAAGCCTCACTGGGCCTCTCTGGGACATGGCCACCTGACCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
3UTR CCA 72 bp GGGCTGACCCTGATCACACCCCACCAATTTCCCCTATaGTTCCAGGTCAACATGACCTTTCTTGAGGGAACA +
Preference number: 3 (lower is better)
Translates to: GLTLITPHQFPL*FQVNMTFLEGT
Trigger: TGTTCCCTCAAGAAAGGTCATGTTGACCTGGAACCATAGGGGAAATTGGTGGGGTGTGATCAGGGTCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394947.8
3UTR-3UTR CAA 90 bp TCATTGAAAGTTAGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAACTGCATGTCTTTGCTaGCATGGACTTCCTTCCCCT +
Preference number: 3 (lower is better)
Translates to: SLKVRPQETPVLALLVCATACLC*HGLPSP
Trigger: AGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGT...TGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCTAACTTTCAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
3UTR GCA 72 bp ACCCAGGCTGTAGGTAAAACTTACTCTTTTGTTGGTTaGACTGGTGGGTTGGGACTTTCTCCTGAACTGGCC +
Preference number: 3 (lower is better)
Translates to: TQAVGKTYSFVG*TGGLGLSPELA
Trigger: GGCCAGTTCAGGAGAAAGTCCCAACCCACCAGTGCAACCAACAAAAGAGTAAGTTTTACCTACAGCCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394947.8
3UTR-3UTR CAA 90 bp CAGGCTGTAGGTAAAACTTACTCTTTTGTTGGTTGCACTGGTGGGTTGGGACTTACTGCATGTCTTTGCTaGCATGGACTTCCTTCCCCT +
Preference number: 3 (lower is better)
Translates to: QAVGKTYSFVGCTGGLGLTACLC*HGLPSP
Trigger: AGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGT...AAGTCCCAACCCACCAGTGCAACCAACAAAAGAGTAAGTTTTACCTACAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394947.8
3UTR-3UTR CAA 90 bp GCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTTATACCCAAAACCCTTaGGGAAAAGTTCCAGCTTCA +
Preference number: 3 (lower is better)
Translates to: ALLVCASKLHVFACMDFLYTQNP*GKVPAS
Trigger: TGAAGCTGGAACTTTTCCCAAAGGGTTTTGGGTATA...AAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
3UTR-3UTR CAA 90 bp TCATTGAAAGTTAGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCATATACCCAAAACCCTTaGGGAAAAGTTCCAGCTTCA +
Preference number: 3 (lower is better)
Translates to: SLKVRPQETPVLALLVCAYTQNP*GKVPAS
Trigger: TGAAGCTGGAACTTTTCCCAAAGGGTTTTGGGTATA...TGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCTAACTTTCAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
3UTR TCA 72 bp ATACAAAACAGTTCCACGGGAGCTAAAAAGGACAACTaGTTTGAACTCGTTGAGGTTGAGAACCAGAGGAGA +
Preference number: 3 (lower is better)
Translates to: IQNSSTGAKKDN*FELVEVENQRR
Trigger: TCTCCTCTGGTTCTCAACCTCAACGAGTTCAAATCAGTTGTCCTTTTTAGCTCCCGTGGAACTGTTTTGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
3UTR GCA 72 bp CTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATaGATCTCCATCCAGTCAAAGTGTGAACAGCATCCG +
Preference number: 3 (lower is better)
Translates to: LSIKSFSSLFCK*ISIQSKCEQHP
Trigger: CGGATGCTGTTCACACTTTGACTGGATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
3UTR CCA 72 bp ATACCAAAGAGTCCTGTGAGGAAGGTGGGTAAAAACTaGTGTTGTGCTTTGATAGGGTTGATTGAAAAAGGC +
Preference number: 3 (lower is better)
Translates to: IPKSPVRKVGKN*CCALIGLIEKG
Trigger: GCCTTTTTCAATCAACCCTATCAAAGCACAACACCAGTTTTTACCCACCTTCCTCACAGGACTCTTTGGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000567289.5
3UTR-3UTR CAA 90 bp TTTGCCCTAAAATCTCATCCCACAAAGCTCTTTTTGGCACCCTACACTTTGGCTAAAAGGACAACTGATTaGAACTCGTTGAGGTTGAGA +
Preference number: 3 (lower is better)
Translates to: FALKSHPTKLFLAPYTLAKRTTD*NSLRLR
Trigger: TCTCAACCTCAACGAGTTCAAATCAGTTGTCCTTTT...AGCCAAAGTGTAGGGTGCCAAAAAGAGCTTTGTGGGATGAGATTTTAGGGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394947.8
3UTR-3UTR CAA 90 bp AGCAAACATAAAACACACAGAACATTGCTGGTTACAACTAAGACTTGCGTAATGTTGAACTCGTTGAGGTaGAGAACCAGAGGAGAGAAA +
Preference number: 3 (lower is better)
Translates to: SKHKTHRTLLVTTKTCVMLNSLR*RTRGEK
Trigger: TTTCTCTCCTCTGGTTCTCAACCTCAACGAGTTCAA...CATTACGCAAGTCTTAGTTGTAACCAGCAATGTTCTGTGTGTTTTATGTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394947.8
3UTR-3UTR CAA 90 bp ATACCAAAGAGTCCTGTGAGGAAGGTGGGTAAAAACTGGTGTTGTGCTTTGATATTGAAACCTGAACACTaGCTGCAACAATCACATATT +
Preference number: 3 (lower is better)
Translates to: IPKSPVRKVGKNWCCALILKPEH*LQQSHI
Trigger: AATATGTGATTGTTGCAGCAAGTGTTCAGGTTTCAA...TATCAAAGCACAACACCAGTTTTTACCCACCTTCCTCACAGGACTCTTTGGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567289.5
3UTR GCA 72 bp AAAACACACAGAACATTGCTGGTTACAACTAAGACTTaGGTAATGGTTGCTGAAGAAAAATCCACCAGAGTA +
Preference number: 3 (lower is better)
Translates to: KTHRTLLVTTKT*VMVAEEKSTRV
Trigger: TACTCTGGTGGATTTTTCTTCAGCAACCATTACGCAAGTCTTAGTTGTAACCAGCAATGTTCTGTGTGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394947.8
3UTR-3UTR CAA 90 bp AGAAATCCTAACTCTATCTATGACTCACTCTATAACCCCAAATCCAAAACCTTTACAGTCCACAAACATTaGAGTATATTCTTCTCTGGA +
Preference number: 3 (lower is better)
Translates to: RNPNSIYDSLYNPKSKTFTVHKH*SIFFSG
Trigger: TCCAGAGAAGAATATACTCAAATGTTTGTGGACTGT...AAAGGTTTTGGATTTGGGGTTATAGAGTGAGTCATAGATAGAGTTAGGATTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567289.5
3UTR-3UTR CAA 90 bp AGAAATCCTAACTCTATCTATGACTCACTCTATAACCCCAAATCCAAAACCTTTAGAAGAAACAACTATTaGCTGCATATGGATATGTCC +
Preference number: 3 (lower is better)
Translates to: RNPNSIYDSLYNPKSKTFRRNNY*LHMDMS
Trigger: GGACATATCCATATGCAGCAAATAGTTGTTTCTTCT...AAAGGTTTTGGATTTGGGGTTATAGAGTGAGTCATAGATAGAGTTAGGATTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567289.5
3UTR TCA 72 bp CAAACATTTGAGTATATTCTTCTCTGGATCAGGCACTaGTGCCAAGATAGGAAACATAAGCAAATTTCACAA +
Preference number: 3 (lower is better)
Translates to: QTFEYILLWIRH*CQDRKHKQISQ
Trigger: TTGTGAAATTTGCTTATGTTTCCTATCTTGGCATCAGTGCCTGATCCAGAGAAGAATATACTCAAATGTTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567289.5
3UTR GCA 72 bp CAATTTACTGTACTAACCTGTAGCCAATCATATATGTaGTCAATAGAGAGTTCAAAAGGAAGCAGCCAAAAA +
Preference number: 3 (lower is better)
Translates to: QFTVLTCSQSYM*SIESSKGSSQK
Trigger: TTTTTGGCTGCTTCCTTTTGAACTCTCTATTGAGCACATATATGATTGGCTACAGGTTAGTACAGTAAATTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR CCA 90 bp GCTGCACCAGCCACACACAGGTCAGGTGGCCATGTCCCAGAGAGGCCCAGTGAGACCACCTGGCCTCCGTaGGGCTGCACCGCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: AAPATHRSGGHVPERPSETTWPP*GCTAVG
Trigger: CCCAACAGCGGTGCAGCCCCACGGAGGCCAGGTGGT...CTCACTGGGCCTCTCTGGGACATGGCCACCTGACCTGTGTGTGGCTGGTGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp GCTGCACCAGCCACACACAGGTCAGGTGGCCATGTCCCAGAGAGGCCCAGTGAGCCAGGGATCCGACGCTaGTGGGCTGCATACACCGGT +
Preference number: 4 (lower is better)
Translates to: AAPATHRSGGHVPERPSEPGIRR*WAAYTG
Trigger: ACCGGTGTATGCAGCCCAGCAGCGTCGGATCCCTGG...CTCACTGGGCCTCTCTGGGACATGGCCACCTGACCTGTGTGTGGCTGGTGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp GCTGCACCAGCCACACACAGGTCAGGTGGCCATGTCCCAGAGAGGCCCAGTGAGCACTTGGTGCCAGGCTaGACCAGCCACACACAGGTC +
Preference number: 4 (lower is better)
Translates to: AAPATHRSGGHVPERPSEHLVPG*TSHTQV
Trigger: GACCTGTGTGTGGCTGGTGCAGCCTGGCACCAAGTG...CTCACTGGGCCTCTCTGGGACATGGCCACCTGACCTGTGTGTGGCTGGTGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp GCTGCACCAGCCACACACAGGTCAGGTGGCCATGTCCCAGAGAGGCCCAGTGAGATCTGGCAGCCATTCTaGCTGGGCCTCTGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: AAPATHRSGGHVPERPSEIWQPF*LGLCGL
Trigger: CAAGCCGCAGAGGCCCAGCCAGAATGGCTGCCAGAT...CTCACTGGGCCTCTCTGGGACATGGCCACCTGACCTGTGTGTGGCTGGTGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp GCTGCACCAGCCACACACAGGTCAGGTGGCCATGTCCCAGAGAGGCCCAGTGAGGAAAAGCCTCTGTGCTaGCAGGGATCCGACGCTGCT +
Preference number: 4 (lower is better)
Translates to: AAPATHRSGGHVPERPSEEKPLC*QGSDAA
Trigger: AGCAGCGTCGGATCCCTGGCAGCACAGAGGCTTTTC...CTCACTGGGCCTCTCTGGGACATGGCCACCTGACCTGTGTGTGGCTGGTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp GCTGCACCAGCCACACACAGGTCAGGTGGCCATGTCCCAGAGAGGCCCAGTGAGTGCATACGGTGGAAGTaGGGGAGTCTGCTGACTGGC +
Preference number: 4 (lower is better)
Translates to: AAPATHRSGGHVPERPSECIRWK*GSLLTG
Trigger: GCCAGTCAGCAGACTCCCCCACTTCCACCGTATGCA...CTCACTGGGCCTCTCTGGGACATGGCCACCTGACCTGTGTGTGGCTGGTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp AGGCCCACACACACATCCCCACACACACCCCAAGTTATCTGCTCTGGCTTTGCAGCTATAGCGGGCCCATaGCTGCCGGAGCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: RPTHTSPHTPQVICSGFAAIAGP*LPELCG
Trigger: GCCACAGAGCTCCGGCAGTCATGGGCCCGCTATAGC...TGCAAAGCCAGAGCAGATAACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp CCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCGCCCCCGGCCCAGCGTaGTCTCACCGCAAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PQETPVLALLVCASKLHVAPGPA*SHRKAA
Trigger: AGCAGCTTTGCGGTGAGAGCACGCTGGGCCGGGGGC...GACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394949.8
CDS-3UTR GCA 90 bp GCTGCACCAGCCACACACAGGTCAGGTGGCCATGTCCCAGAGAGGCCCAGTGAGCTGCATGTCTTTGCTTaGATGGACTTCCTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: AAPATHRSGGHVPERPSELHVFA*MDFLPL
Trigger: GAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAG...CTCACTGGGCCTCTCTGGGACATGGCCACCTGACCTGTGTGTGGCTGGTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp GCTGCACCAGCCACACACAGGTCAGGTGGCCATGTCCCAGAGAGGCCCAGTGAGATTTGCCGTTCGGCTTaGGAACAAATCCGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: AAPATHRSGGHVPERPSEICRSA*EQIRSS
Trigger: GCTGCTACGGATTTGTTCCCAAGCCGAACGGCAAAT...CTCACTGGGCCTCTCTGGGACATGGCCACCTGACCTGTGTGTGGCTGGTGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp GCTGCACCAGCCACACACAGGTCAGGTGGCCATGTCCCAGAGAGGCCCAGTGAGTTGTTAAAGCCTCTCTaGGCTTCTCGCCATTCTTCC +
Preference number: 4 (lower is better)
Translates to: AAPATHRSGGHVPERPSELLKPL*ASRHSS
Trigger: GGAAGAATGGCGAGAAGCTCAGAGAGGCTTTAACAA...CTCACTGGGCCTCTCTGGGACATGGCCACCTGACCTGTGTGTGGCTGGTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp GCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTGTGTCCCTCTCAGCGTaGGCCGCGAGCTCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: ALLVCASKLHVFACMDFLVSLSA*AASSAG
Trigger: CCCTGCTGAGCTCGCGGCTCACGCTGAGAGGGACAC...AAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp GCTGCACCAGCCACACACAGGTCAGGTGGCCATGTCCCAGAGAGGCCCAGTGAGCCCTGGATAAGGAACTaGAGTCAAAATCCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: AAPATHRSGGHVPERPSEPWIRN*SQNPCF
Trigger: GAAGCAGGGATTTTGACTTCAGTTCCTTATCCAGGG...CTCACTGGGCCTCTCTGGGACATGGCCACCTGACCTGTGTGTGGCTGGTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR GCA 90 bp GCTGCACCAGCCACACACAGGTCAGGTGGCCATGTCCCAGAGAGGCCCAGTGAGAAAGGAGAGACTAGTTaGACAAGCTCAGCACGAGAG +
Preference number: 4 (lower is better)
Translates to: AAPATHRSGGHVPERPSEKGETS*TSSARE
Trigger: CTCTCGTGCTGAGCTTGTGCAACTAGTCTCTCCTTT...CTCACTGGGCCTCTCTGGGACATGGCCACCTGACCTGTGTGTGGCTGGTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp AGGCCCACACACACATCCCCACACACACCCCAAGTTATCTGCTCTGGCTTTGCACACTTGGTGCCAGGCTaGACCAGCCACACACAGGTC +
Preference number: 4 (lower is better)
Translates to: RPTHTSPHTPQVICSGFAHLVPG*TSHTQV
Trigger: GACCTGTGTGTGGCTGGTGCAGCCTGGCACCAAGTG...TGCAAAGCCAGAGCAGATAACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp GCTGCACCAGCCACACACAGGTCAGGTGGCCATGTCCCAGAGAGGCCCAGTGAGGTAAGGCTCGATAGCTaGAGCCCAATCGTTTACAAG +
Preference number: 4 (lower is better)
Translates to: AAPATHRSGGHVPERPSEVRLDS*SPIVYK
Trigger: CTTGTAAACGATTGGGCTCCAGCTATCGAGCCTTAC...CTCACTGGGCCTCTCTGGGACATGGCCACCTGACCTGTGTGTGGCTGGTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp CAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTATAGCGGGCCCATaGCTGCCGGAGCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: QETPVLALLVCASKLHVFAIAGP*LPELCG
Trigger: GCCACAGAGCTCCGGCAGTCATGGGCCCGCTATAGC...AAAGACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp ATGTTCCTAACAGGTAGCCCACTTGGTGCCAGGCTGCACCAGCCACACACAGGTTCCACCTTCAGCCTCTaGAATTGCTGCTGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: MFLTGSPLGARLHQPHTGSTFSL*NCCCPC
Trigger: GCAGGGACAGCAGCAATTTCAGAGGCTGAAGGTGGA...ACCTGTGTGTGGCTGGTGCAGCCTGGCACCAAGTGGGCTACCTGTTAGGAACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp TCCCAGAGAGGCCCAGTGAGGCTTGAAAGGCATCTTCCTTGTTTCTTCAGTGTGGTTGGGAGGGCTTGCTaGCTTTGGCAGGTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: SQRGPVRLERHLPCFFSVVGRAC*LWQVGA
Trigger: AGCCCCCACCTGCCAAAGTCAGCAAGCCCTCCCAAC...CACACTGAAGAAACAAGGAAGATGCCTTTCAAGCCTCACTGGGCCTCTCTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp ATGTTCCTAACAGGTAGCCCACTTGGTGCCAGGCTGCACCAGCCACACACAGGTGTCTTCATACGCAAGTaGGAGGTGTGGGCCAACAGG +
Preference number: 4 (lower is better)
Translates to: MFLTGSPLGARLHQPHTGVFIRK*EVWANR
Trigger: CCTGTTGGCCCACACCTCTCACTTGCGTATGAAGAC...ACCTGTGTGTGGCTGGTGCAGCCTGGCACCAAGTGGGCTACCTGTTAGGAACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp AGGCCCACACACACATCCCCACACACACCCCAAGTTATCTGCTCTGGCTTTGCACCCAGAGAGGCCCAGTaGGGCTTGAAAGGCATCTTC +
Preference number: 4 (lower is better)
Translates to: RPTHTSPHTPQVICSGFAPREAQ*GLKGIF
Trigger: GAAGATGCCTTTCAAGCCTCACTGGGCCTCTCTGGG...TGCAAAGCCAGAGCAGATAACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp TCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTAGGCCACAGGAGACTGTGTCCCTCTCAGCGTaGGCCGCGAGCTCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SKCEQHPVPSLKVRPQETVSLSA*AASSAG
Trigger: CCCTGCTGAGCTCGCGGCTCACGCTGAGAGGGACAC...AGTCTCCTGTGGCCTAACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp TCCCAGAGAGGCCCAGTGAGGCTTGAAAGGCATCTTCCTTGTTTCTTCAGTGTGCCAGGGATCCGACGCTaGTGGGCTGCATACACCGGT +
Preference number: 4 (lower is better)
Translates to: SQRGPVRLERHLPCFFSVPGIRR*WAAYTG
Trigger: ACCGGTGTATGCAGCCCAGCAGCGTCGGATCCCTGG...CACACTGAAGAAACAAGGAAGATGCCTTTCAAGCCTCACTGGGCCTCTCTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp CCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCCTGTCCCTGCACTGGTaGAACTGGTGGGGCTGGATG +
Preference number: 4 (lower is better)
Translates to: PQETPVLALLVCASKLHVLSLHW*NWWGWM
Trigger: CATCCAGCCCCACCAGTTGCACCAGTGCAGGGACAG...GACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp GCTGCACCAGCCACACACAGGTCAGGTGGCCATGTCCCAGAGAGGCCCAGTGAGATTGTGCTTCTTAACTaGCCCTGTGGCTTCATCTAC +
Preference number: 4 (lower is better)
Translates to: AAPATHRSGGHVPERPSEIVLLN*PCGFIY
Trigger: GTAGATGAAGCCACAGGGGCAGTTAAGAAGCACAAT...CTCACTGGGCCTCTCTGGGACATGGCCACCTGACCTGTGTGTGGCTGGTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp GCTGCACCAGCCACACACAGGTCAGGTGGCCATGTCCCAGAGAGGCCCAGTGAGACACCCCAAGTTATCTaGTCTGGCTTTGCAGTTAAG +
Preference number: 4 (lower is better)
Translates to: AAPATHRSGGHVPERPSETPQVI*SGFAVK
Trigger: CTTAACTGCAAAGCCAGAGCAGATAACTTGGGGTGT...CTCACTGGGCCTCTCTGGGACATGGCCACCTGACCTGTGTGTGGCTGGTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp CTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCGGTCACAGGCTCCGGTaGCCAGACTGGGAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: LCWCVQANCMSLLAWTSFGHRLR*PDWEGG
Trigger: CCCTCCTTCCCAGTCTGGGCACCGGAGCCTGTGACC...GAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR GCA 90 bp GCTGCACCAGCCACACACAGGTCAGGTGGCCATGTCCCAGAGAGGCCCAGTGAGTACTCTTTTGTTGGTTaGACTGGTGGGTTGGGACTT +
Preference number: 4 (lower is better)
Translates to: AAPATHRSGGHVPERPSEYSFVG*TGGLGL
Trigger: AAGTCCCAACCCACCAGTGCAACCAACAAAAGAGTA...CTCACTGGGCCTCTCTGGGACATGGCCACCTGACCTGTGTGTGGCTGGTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CCA 90 bp AGGCCCACACACACATCCCCACACACACCCCAAGTTATCTGCTCTGGCTTTGCACTGCACTGGTGCAACTaGTGGGGCTGGATGAGCATG +
Preference number: 4 (lower is better)
Translates to: RPTHTSPHTPQVICSGFALHWCN*WGWMSM
Trigger: CATGCTCATCCAGCCCCACCAGTTGCACCAGTGCAG...TGCAAAGCCAGAGCAGATAACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp AGGCCCACACACACATCCCCACACACACCCCAAGTTATCTGCTCTGGCTTTGCATGCATACGGTGGAAGTaGGGGAGTCTGCTGACTGGC +
Preference number: 4 (lower is better)
Translates to: RPTHTSPHTPQVICSGFACIRWK*GSLLTG
Trigger: GCCAGTCAGCAGACTCCCCCACTTCCACCGTATGCA...TGCAAAGCCAGAGCAGATAACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp AGGCCCACACACACATCCCCACACACACCCCAAGTTATCTGCTCTGGCTTTGCATGGGGATGCATACGGTaGAAGTGGGGGAGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: RPTHTSPHTPQVICSGFAWGCIR*KWGSLL
Trigger: CAGCAGACTCCCCCACTTCCACCGTATGCATCCCCA...TGCAAAGCCAGAGCAGATAACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp CCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCGACCGGCGGAGAACGTaGGGATGCATACGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: PQETPVLALLVCASKLHVDRRRT*GCIRWK
Trigger: CTTCCACCGTATGCATCCCCACGTTCTCCGCCGGTC...GACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp AGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGGCAGCCATTCTGGCTaGGCCTCTGCGGCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: RPQETPVLALLVCASKLHGSHSG*ASAACC
Trigger: ACAACAAGCCGCAGAGGCCCAGCCAGAATGGCTGCC...ATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp CCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCATCTGGCAGCCATTCTaGCTGGGCCTCTGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: PQETPVLALLVCASKLHVIWQPF*LGLCGL
Trigger: CAAGCCGCAGAGGCCCAGCCAGAATGGCTGCCAGAT...GACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp AGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGGATGTCTGCGGATCTaGCAGCCATTCTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RPQETPVLALLVCASKLHGCLRI*QPFWLG
Trigger: GCCCAGCCAGAATGGCTGCCAGATCCGCAGACATCC...ATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp CCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCGATCGGGGTGGCCTTTaGATAGCTGGGACACACGAC +
Preference number: 4 (lower is better)
Translates to: PQETPVLALLVCASKLHVDRGGL*IAGTHD
Trigger: GTCGTGTGTCCCAGCTATTCAAAGGCCACCCCGATC...GACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp AGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATATTGTCACTGGTGTGTaGGGCTGGACCGGCGGAGAA +
Preference number: 4 (lower is better)
Translates to: RPQETPVLALLVCASKLHIVTGV*GWTGGE
Trigger: TTCTCCGCCGGTCCAGCCTCACACACCAGTGACAAT...ATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp AGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATCCCAGAGAGGCCCAGTaGGGCTTGAAAGGCATCTTC +
Preference number: 4 (lower is better)
Translates to: RPQETPVLALLVCASKLHPREAQ*GLKGIF
Trigger: GAAGATGCCTTTCAAGCCTCACTGGGCCTCTCTGGG...ATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp AGGCCCACACACACATCCCCACACACACCCCAAGTTATCTGCTCTGGCTTTGCACGCCGCTTCATTCTGTaGTCATGCTCAGGGATGCAC +
Preference number: 4 (lower is better)
Translates to: RPTHTSPHTPQVICSGFARRFIL*SCSGMH
Trigger: GTGCATCCCTGAGCATGAGCACAGAATGAAGCGGCG...TGCAAAGCCAGAGCAGATAACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp GTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGCTGTCCCTGCACTGGTaGAACTGGTGGGGCTGGATG +
Preference number: 4 (lower is better)
Translates to: VCASKLHVFACMDFLPLQLSLHW*NWWGWM
Trigger: CATCCAGCCCCACCAGTTGCACCAGTGCAGGGACAG...CTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp AGGCCCACACACACATCCCCACACACACCCCAAGTTATCTGCTCTGGCTTTGCAGAGGCTGTGGCTGGATaGCATGGGTGGGAATCTGAT +
Preference number: 4 (lower is better)
Translates to: RPTHTSPHTPQVICSGFAEAVAG*HGWESD
Trigger: ATCAGATTCCCACCCATGGCATCCAGCCACAGCCTC...TGCAAAGCCAGAGCAGATAACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp AGGCCCACACACACATCCCCACACACACCCCAAGTTATCTGCTCTGGCTTTGCATACACCGGTGACTCCTaGTCATCCAAACGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: RPTHTSPHTPQVICSGFAYTGDS*SSKRRF
Trigger: GAAGCGGCGTTTGGATGACCAGGAGTCACCGGTGTA...TGCAAAGCCAGAGCAGATAACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp CTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCGGGATCCGACGCTGCTaGGCTGCATACACCGGTGAC +
Preference number: 4 (lower is better)
Translates to: LCWCVQANCMSLLAWTSFGIRRC*AAYTGD
Trigger: GTCACCGGTGTATGCAGCCCAGCAGCGTCGGATCCC...GAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp CCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCGGGCTGCACCGCTGTTaGGTGATGATGGCTGCTATG +
Preference number: 4 (lower is better)
Translates to: PQETPVLALLVCASKLHVGLHRC*VMMAAM
Trigger: CATAGCAGCCATCATCACCCAACAGCGGTGCAGCCC...GACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp AGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATCTGCACTGGTGCAACTaGTGGGGCTGGATGAGCATG +
Preference number: 4 (lower is better)
Translates to: RPQETPVLALLVCASKLHLHWCN*WGWMSM
Trigger: CATGCTCATCCAGCCCCACCAGTTGCACCAGTGCAG...ATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp GCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCTGCTGTCCCTGCACTaGTGCAACTGGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ALLVCASKLHVFACMDFLLLSLH*CNWWGW
Trigger: CCAGCCCCACCAGTTGCACCAGTGCAGGGACAGCAG...AAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp TCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTAGGCCACAGGAGACTGTTGGGAGGGCTTGCTaGCTTTGGCAGGTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: SKCEQHPVPSLKVRPQETVGRAC*LWQVGA
Trigger: AGCCCCCACCTGCCAAAGTCAGCAAGCCCTCCCAAC...AGTCTCCTGTGGCCTAACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp CAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTAGTGGGGGAGTCTGCTaGCTGGCCGGAGTATGTGCT +
Preference number: 4 (lower is better)
Translates to: QETPVLALLVCASKLHVFSGGVC*LAGVCA
Trigger: AGCACATACTCCGGCCAGTCAGCAGACTCCCCCACT...AAAGACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp GTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGATTGTCACTGGTGTGTaGGGCTGGACCGGCGGAGAA +
Preference number: 4 (lower is better)
Translates to: VCASKLHVFACMDFLPLQIVTGV*GWTGGE
Trigger: TTCTCCGCCGGTCCAGCCTCACACACCAGTGACAAT...CTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp AGGCCCACACACACATCCCCACACACACCCCAAGTTATCTGCTCTGGCTTTGCATCTTTGAGACGTAGCTaGATGGCAGGGCTGTCACTC +
Preference number: 4 (lower is better)
Translates to: RPTHTSPHTPQVICSGFASLRRS*MAGLSL
Trigger: GAGTGACAGCCCTGCCATTCAGCTACGTCTCAAAGA...TGCAAAGCCAGAGCAGATAACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp GTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGGAAAAGCCTCTGTGCTaGCAGGGATCCGACGCTGCT +
Preference number: 4 (lower is better)
Translates to: VCASKLHVFACMDFLPLQEKPLC*QGSDAA
Trigger: AGCAGCGTCGGATCCCTGGCAGCACAGAGGCTTTTC...CTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp GTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGGAGGAAAAGCCTCTGTaGTGCCAGGGATCCGACGCT +
Preference number: 4 (lower is better)
Translates to: VCASKLHVFACMDFLPLQEEKPL*CQGSDA
Trigger: AGCGTCGGATCCCTGGCAGCACAGAGGCTTTTCCTC...CTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp GTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGGGGAGGCTGTGGCTGGATaGCATGGGTGGGAATCTGAT +
Preference number: 4 (lower is better)
Translates to: VCKQTACLCLHGLPSPPGEAVAG*HGWESD
Trigger: ATCAGATTCCCACCCATGGCATCCAGCCACAGCCTC...CCCTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp AGGCCCACACACACATCCCCACACACACCCCAAGTTATCTGCTCTGGCTTTGCATGGGCATACACCTCCTaGTCTGTCAATGCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: RPTHTSPHTPQVICSGFAWAYTS*SVNAGV
Trigger: CACTCCAGCATTGACAGAGCAGGAGGTGTATGCCCA...TGCAAAGCCAGAGCAGATAACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp TCCCAGAGAGGCCCAGTGAGGCTTGAAAGGCATCTTCCTTGTTTCTTCAGTGTGCCACTTGCTGGTCTCTaGTGCCATTTCACGGGGCAC +
Preference number: 4 (lower is better)
Translates to: SQRGPVRLERHLPCFFSVPLAGL*CHFTGH
Trigger: GTGCCCCGTGAAATGGCAGCAGAGACCAGCAAGTGG...CACACTGAAGAAACAAGGAAGATGCCTTTCAAGCCTCACTGGGCCTCTCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp CTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCTCTCACCGCAAAGCTaGTTCGGCCGCTCGTCACTG +
Preference number: 4 (lower is better)
Translates to: LCWCVQANCMSLLAWTSFLSPQS*FGRSSL
Trigger: CAGTGACGAGCGGCCGAAGCAGCTTTGCGGTGAGAG...GAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394949.8
CDS-3UTR CCA 90 bp TCCCAGAGAGGCCCAGTGAGGCTTGAAAGGCATCTTCCTTGTTTCTTCAGTGTGGGGCTGCACCGCTGTTaGGTGATGATGGCTGCTATG +
Preference number: 4 (lower is better)
Translates to: SQRGPVRLERHLPCFFSVGLHRC*VMMAAM
Trigger: CATAGCAGCCATCATCACCCAACAGCGGTGCAGCCC...CACACTGAAGAAACAAGGAAGATGCCTTTCAAGCCTCACTGGGCCTCTCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp AGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATTGCAACTGGTGGGGCTaGATGAGCATGACTCTGGAC +
Preference number: 4 (lower is better)
Translates to: RPQETPVLALLVCASKLHCNWWG*MSMTLD
Trigger: GTCCAGAGTCATGCTCATCCAGCCCCACCAGTTGCA...ATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp CCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTGCAACTGGTGGGGCTaGATGAGCATGACTCTGGAC +
Preference number: 4 (lower is better)
Translates to: PQETPVLALLVCASKLHVCNWWG*MSMTLD
Trigger: GTCCAGAGTCATGCTCATCCAGCCCCACCAGTTGCA...GACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp AAAATTGTGTGTGTGTGTGCGTGTGTGTGTCAGAGAGTAAAGCTGGTGGATGGCCTGCTGTCCCTGCACTaGTGCAACTGGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KIVCVCACVCQRVKLVDGLLSLH*CNWWGW
Trigger: CCAGCCCCACCAGTTGCACCAGTGCAGGGACAGCAG...GCCATCCACCAGCTTTACTCTCTGACACACACACGCACACACACACACAATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp ATGTTCCTAACAGGTAGCCCACTTGGTGCCAGGCTGCACCAGCCACACACAGGTACGACTAATCACTCCTaGGGTGTCGATGCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: MFLTGSPLGARLHQPHTGTTNHS*GVDALR
Trigger: TCTCAGAGCATCGACACCCCAGGAGTGATTAGTCGT...ACCTGTGTGTGGCTGGTGCAGCCTGGCACCAAGTGGGCTACCTGTTAGGAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp TCCCAGAGAGGCCCAGTGAGGCTTGAAAGGCATCTTCCTTGTTTCTTCAGTGTGTGCATACGGTGGAAGTaGGGGAGTCTGCTGACTGGC +
Preference number: 4 (lower is better)
Translates to: SQRGPVRLERHLPCFFSVCIRWK*GSLLTG
Trigger: GCCAGTCAGCAGACTCCCCCACTTCCACCGTATGCA...CACACTGAAGAAACAAGGAAGATGCCTTTCAAGCCTCACTGGGCCTCTCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp CTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCGACCGGCGGAGAACGTaGGGATGCATACGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: LCWCVQANCMSLLAWTSFDRRRT*GCIRWK
Trigger: CTTCCACCGTATGCATCCCCACGTTCTCCGCCGGTC...GAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp AGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATTCTCTGTATCACAGGTaGTGGTACAGGGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: RPQETPVLALLVCASKLHSLYHR*WYRAPG
Trigger: GCCTGGTGCCCTGTACCACCACCTGTGATACAGAGA...ATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp GCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCACACACAGGTCAGGTaGCCATGTCCCAGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: ALLVCASKLHVFACMDFLHTQVR*PCPREA
Trigger: GGCCTCTCTGGGACATGGCCACCTGACCTGTGTGTG...AAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
3UTR CAA 72 bp TGCACTGGTGGGTTGGGACTTTCTCCTGAACTGGCCTaGAAATCCTATCCTGACCTGCAGGCAAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: CTGGLGLSPELA*KSYPDLQASAL
Trigger: CAGAGCACTTGCCTGCAGGTCAGGATAGGATTTCAAGGCCAGTTCAGGAGAAAGTCCCAACCCACCAGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR TCA 90 bp TCATTGAAAGTTAGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAGGCTGCATACACCGGTaGCTCCTGGTCATCCAAACG +
Preference number: 4 (lower is better)
Translates to: SLKVRPQETPVLALLVCAGCIHR*LLVIQT
Trigger: CGTTTGGATGACCAGGAGTCACCGGTGTATGCAGCC...TGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCTAACTTTCAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp GCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTGGCTGCATACACCGGTaGCTCCTGGTCATCCAAACG +
Preference number: 4 (lower is better)
Translates to: ALLVCASKLHVFACMDFLGCIHR*LLVIQT
Trigger: CGTTTGGATGACCAGGAGTCACCGGTGTATGCAGCC...AAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp AGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATCTGAATTCCCGTAGCTaGCTGCATGGTCTCAGACAC +
Preference number: 4 (lower is better)
Translates to: RPQETPVLALLVCASKLHLNSRS*LHGLRH
Trigger: GTGTCTGAGACCATGCAGTCAGCTACGGGAATTCAG...ATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp GCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTGCTCTGTGGCATGGCTaGAACCTGGTAGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: ALLVCASKLHVFACMDFLALWHG*NLVAGC
Trigger: ACACCCAGCTACCAGGTTTCAGCCATGCCACAGAGC...AAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp CAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTCTGTGGCATGGCTaGAACCTGGTAGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: QETPVLALLVCASKLHVFALWHG*NLVAGC
Trigger: ACACCCAGCTACCAGGTTTCAGCCATGCCACAGAGC...AAAGACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp AAGAATCCACACCAACGAGGGCAGGGATCAAGAAGAACTAAAGTAAGTATCAGGGCTATAGCGGGCCCATaGCTGCCGGAGCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: KNPHQRGQGSRRTKVSIRAIAGP*LPELCG
Trigger: GCCACAGAGCTCCGGCAGTCATGGGCCCGCTATAGC...CCTGATACTTACTTTAGTTCTTCTTGATCCCTGCCCTCGTTGGTGTGGATTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR TCA 90 bp CTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCGATCGGGGTGGCCTTTaGATAGCTGGGACACACGAC +
Preference number: 4 (lower is better)
Translates to: LCWCVQANCMSLLAWTSFDRGGL*IAGTHD
Trigger: GTCGTGTGTCCCAGCTATTCAAAGGCCACCCCGATC...GAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp AACCTGCTGCTGCATATAATACAGGTTGGGTTTAGAGCTTGGAGCTCAGATGTCGTTGGGAGGGCTTGCTaGCTTTGGCAGGTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: NLLLHIIQVGFRAWSSDVVGRAC*LWQVGA
Trigger: AGCCCCCACCTGCCAAAGTCAGCAAGCCCTCCCAAC...GACATCTGAGCTCCAAGCTCTAAACCCAACCTGTATTATATGCAGCAGCAGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR TCA 90 bp TCCCAGAGAGGCCCAGTGAGGCTTGAAAGGCATCTTCCTTGTTTCTTCAGTGTGGTCTTCATACGCAAGTaGGAGGTGTGGGCCAACAGG +
Preference number: 4 (lower is better)
Translates to: SQRGPVRLERHLPCFFSVVFIRK*EVWANR
Trigger: CCTGTTGGCCCACACCTCTCACTTGCGTATGAAGAC...CACACTGAAGAAACAAGGAAGATGCCTTTCAAGCCTCACTGGGCCTCTCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp TCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTAGGCCACAGGAGACTTGCTCTCGACCACGTTaGCACTTCCGGATCCGCCGT +
Preference number: 4 (lower is better)
Translates to: SKCEQHPVPSLKVRPQETCSRPR*HFRIRR
Trigger: ACGGCGGATCCGGAAGTGTCAACGTGGTCGAGAGCA...AGTCTCCTGTGGCCTAACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp AAAATTGTGTGTGTGTGTGCGTGTGTGTGTCAGAGAGTAAAGCTGGTGGATGGCTGCTCTCGACCACGTTaGCACTTCCGGATCCGCCGT +
Preference number: 4 (lower is better)
Translates to: KIVCVCACVCQRVKLVDGCSRPR*HFRIRR
Trigger: ACGGCGGATCCGGAAGTGTCAACGTGGTCGAGAGCA...GCCATCCACCAGCTTTACTCTCTGACACACACACGCACACACACACACAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp AGGCCCACACACACATCCCCACACACACCCCAAGTTATCTGCTCTGGCTTTGCACAGGCCTGGAATCTCTaGTGTAGACGCTTGCTTACA +
Preference number: 4 (lower is better)
Translates to: RPTHTSPHTPQVICSGFAQAWNL*CRRLLT
Trigger: TGTAAGCAAGCGTCTACATCAGAGATTCCAGGCCTG...TGCAAAGCCAGAGCAGATAACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp AGGCCCACACACACATCCCCACACACACCCCAAGTTATCTGCTCTGGCTTTGCATGTTTCTTCAGTGTGTaGGTGCATAGGCCCACACAC +
Preference number: 4 (lower is better)
Translates to: RPTHTSPHTPQVICSGFACFFSV*VHRPTH
Trigger: GTGTGTGGGCCTATGCACTCACACACTGAAGAAACA...TGCAAAGCCAGAGCAGATAACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp ATACCAAAGAGTCCTGTGAGGAAGGTGGGTAAAAACTGGTGTTGTGCTTTGATAGTGTCCCTCTCAGCGTaGGCCGCGAGCTCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: IPKSPVRKVGKNWCCALIVSLSA*AASSAG
Trigger: CCCTGCTGAGCTCGCGGCTCACGCTGAGAGGGACAC...TATCAAAGCACAACACCAGTTTTTACCCACCTTCCTCACAGGACTCTTTGGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR GCA 90 bp TCATTGAAAGTTAGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAGAGGAAAAGCCTCTGTaGTGCCAGGGATCCGACGCT +
Preference number: 4 (lower is better)
Translates to: SLKVRPQETPVLALLVCAEEKPL*CQGSDA
Trigger: AGCGTCGGATCCCTGGCAGCACAGAGGCTTTTCCTC...TGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCTAACTTTCAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp GTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGGGCATGGTCTCAGACACTaGTTCATACACAGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: VCKQTACLCLHGLPSPPGHGLRH*FIHRRG
Trigger: GCCCCTCCTGTGTATGAAGCAGTGTCTGAGACCATG...CCCTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp AGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATTGGGCATACACCTCCTaGTCTGTCAATGCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: RPQETPVLALLVCASKLHWAYTS*SVNAGV
Trigger: CACTCCAGCATTGACAGAGCAGGAGGTGTATGCCCA...ATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp TCCCAGAGAGGCCCAGTGAGGCTTGAAAGGCATCTTCCTTGTTTCTTCAGTGTGTTCTGGCTGGGCCTCTaGGGCTTGTTGTTCAGTTGG +
Preference number: 4 (lower is better)
Translates to: SQRGPVRLERHLPCFFSVFWLGL*GLLFSW
Trigger: CCAACTGAACAACAAGCCGCAGAGGCCCAGCCAGAA...CACACTGAAGAAACAAGGAAGATGCCTTTCAAGCCTCACTGGGCCTCTCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp CCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTCTTGTCTCGCTTTATaGCCAGCACTTCCCGTTCCC +
Preference number: 4 (lower is better)
Translates to: PQETPVLALLVCASKLHVSCLAL*PALPVP
Trigger: GGGAACGGGAAGTGCTGGGCATAAAGCGAGACAAGA...GACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp GTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGGGGTGATGAGTCTATGTTaGCATCCAGCAGGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: VCKQTACLCLHGLPSPPGVMSLC*HPAGSA
Trigger: TGCGGAGCCTGCTGGATGGCAACATAGACTCATCAC...CCCTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp CAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTCCACTTGCTGGTCTCTaGTGCCATTTCACGGGGCAC +
Preference number: 4 (lower is better)
Translates to: QETPVLALLVCASKLHVFPLAGL*CHFTGH
Trigger: GTGCCCCGTGAAATGGCAGCAGAGACCAGCAAGTGG...AAAGACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp TCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTAGGCCACAGGAGACTCACTTGGTGCCAGGCTaGACCAGCCACACACAGGTC +
Preference number: 4 (lower is better)
Translates to: SKCEQHPVPSLKVRPQETHLVPG*TSHTQV
Trigger: GACCTGTGTGTGGCTGGTGCAGCCTGGCACCAAGTG...AGTCTCCTGTGGCCTAACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp AGGCCCACACACACATCCCCACACACACCCCAAGTTATCTGCTCTGGCTTTGCAGCTCATGCTCAGGGATaGACTACAAAACCCTCGAGT +
Preference number: 4 (lower is better)
Translates to: RPTHTSPHTPQVICSGFAAHAQG*TTKPSS
Trigger: ACTCGAGGGTTTTGTAGTGCATCCCTGAGCATGAGC...TGCAAAGCCAGAGCAGATAACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394949.8
CDS-3UTR CCA 90 bp GCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCTGCACTGGTGCAACTaGTGGGGCTGGATGAGCATG +
Preference number: 4 (lower is better)
Translates to: ALLVCASKLHVFACMDFLLHWCN*WGWMSM
Trigger: CATGCTCATCCAGCCCCACCAGTTGCACCAGTGCAG...AAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp TCATTGAAAGTTAGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCATGGGGATGCATACGGTaGAAGTGGGGGAGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SLKVRPQETPVLALLVCAWGCIR*KWGSLL
Trigger: CAGCAGACTCCCCCACTTCCACCGTATGCATCCCCA...TGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCTAACTTTCAATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp GTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGGGAAGAGACGAGCAACCTaGGCATACACCTCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: VCKQTACLCLHGLPSPPGKRRAT*AYTSCS
Trigger: AGAGCAGGAGGTGTATGCCCAGGTTGCTCGTCTCTT...CCCTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp ATGTTCCTAACAGGTAGCCCACTTGGTGCCAGGCTGCACCAGCCACACACAGGTAAAGCACGGAGCTGTTaGCATCTGGTAGGAATTGTC +
Preference number: 4 (lower is better)
Translates to: MFLTGSPLGARLHQPHTGKARSC*HLVGIV
Trigger: GACAATTCCTACCAGATGCCAACAGCTCCGTGCTTT...ACCTGTGTGTGGCTGGTGCAGCCTGGCACCAAGTGGGCTACCTGTTAGGAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp GCTGCACCAGCCACACACAGGTCAGGTGGCCATGTCCCAGAGAGGCCCAGTGAGGGATTGTTGCCAGATTaGTCTCTAAAACTACATCAA +
Preference number: 4 (lower is better)
Translates to: AAPATHRSGGHVPERPSEGLLPD*SLKLHQ
Trigger: TTGATGTAGTTTTAGAGACCAATCTGGCAACAATCC...CTCACTGGGCCTCTCTGGGACATGGCCACCTGACCTGTGTGTGGCTGGTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp CCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCGGTGTTACAGAGTACTaGATTCCCGTAGCTGACTGC +
Preference number: 4 (lower is better)
Translates to: PQETPVLALLVCASKLHVGVTEY*IPVADC
Trigger: GCAGTCAGCTACGGGAATTCAGTACTCTGTAACACC...GACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp TCATTGAAAGTTAGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCATCCACCTTCAGCCTCTaGAATTGCTGCTGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: SLKVRPQETPVLALLVCASTFSL*NCCCPC
Trigger: GCAGGGACAGCAGCAATTTCAGAGGCTGAAGGTGGA...TGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCTAACTTTCAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp ATGTTCCTAACAGGTAGCCCACTTGGTGCCAGGCTGCACCAGCCACACACAGGTGGGGTGTCGATGCTCTaGGATTTAAATTCCTTCATG +
Preference number: 4 (lower is better)
Translates to: MFLTGSPLGARLHQPHTGGVSML*DLNSFM
Trigger: CATGAAGGAATTTAAATCTCAGAGCATCGACACCCC...ACCTGTGTGTGGCTGGTGCAGCCTGGCACCAAGTGGGCTACCTGTTAGGAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp AGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGGGGCAAGAAGGTGTTaGATCCCATTATCAGATCGG +
Preference number: 4 (lower is better)
Translates to: RPQETPVLALLVCASKLHGARRC*IPLSDR
Trigger: CCGATCTGATAATGGGATTCAACACCTTCTTGCCCC...ATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp TGCATCTCCATCCAGTCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTAGTGGGGGAGTCTGCTaGCTGGCCGGAGTATGTGCT +
Preference number: 4 (lower is better)
Translates to: CISIQSKCEQHPVPSLKVSGGVC*LAGVCA
Trigger: AGCACATACTCCGGCCAGTCAGCAGACTCCCCCACT...AACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGACTGGATGGAGATGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp AGGCCCACACACACATCCCCACACACACCCCAAGTTATCTGCTCTGGCTTTGCATTGTTAAAGCCTCTCTaGGCTTCTCGCCATTCTTCC +
Preference number: 4 (lower is better)
Translates to: RPTHTSPHTPQVICSGFALLKPL*ASRHSS
Trigger: GGAAGAATGGCGAGAAGCTCAGAGAGGCTTTAACAA...TGCAAAGCCAGAGCAGATAACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp CAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGTCTTCATACGCAAGTaGGAGGTGTGGGCCAACAGG +
Preference number: 4 (lower is better)
Translates to: QETPVLALLVCASKLHVFVFIRK*EVWANR
Trigger: CCTGTTGGCCCACACCTCTCACTTGCGTATGAAGAC...AAAGACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp AGGCCCACACACACATCCCCACACACACCCCAAGTTATCTGCTCTGGCTTTGCATATTTGTCCTCCTTCTaGATGCCTGTCTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RPTHTSPHTPQVICSGFAYLSSF*MPVCLF
Trigger: GAAGAGGCAGACAGGCATTCAGAAGGAGGACAAATA...TGCAAAGCCAGAGCAGATAACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp AGGCCCACACACACATCCCCACACACACCCCAAGTTATCTGCTCTGGCTTTGCATATGCTGCAGCTGTCTaGCAATGCTCTGGATCAGTT +
Preference number: 4 (lower is better)
Translates to: RPTHTSPHTPQVICSGFAYAAAV*QCSGSV
Trigger: AACTGATCCAGAGCATTGTCAGACAGCTGCAGCATA...TGCAAAGCCAGAGCAGATAACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp GTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGGGCAGGCCTGGAATCTCTaGTGTAGACGCTTGCTTACA +
Preference number: 4 (lower is better)
Translates to: VCKQTACLCLHGLPSPPGQAWNL*CRRLLT
Trigger: TGTAAGCAAGCGTCTACATCAGAGATTCCAGGCCTG...CCCTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp AAGAATCCACACCAACGAGGGCAGGGATCAAGAAGAACTAAAGTAAGTATCAGGCAGGGGAGGGTGCAGTaGGTTGAGATGGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: KNPHQRGQGSRRTKVSIRQGRVQ*VEMAPL
Trigger: CAGTGGCGCCATCTCAACTCACTGCACCCTCCCCTG...CCTGATACTTACTTTAGTTCTTCTTGATCCCTGCCCTCGTTGGTGTGGATTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR GCA 90 bp GTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGGGATTCCCGTAGCTGACTaGATGGTCTCAGACACTGCT +
Preference number: 4 (lower is better)
Translates to: VCKQTACLCLHGLPSPPGIPVAD*MVSDTA
Trigger: AGCAGTGTCTGAGACCATGCAGTCAGCTACGGGAAT...CCCTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp GTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGGCTGCTATGAACTGCTaGTATAGCGGGCCCATGACT +
Preference number: 4 (lower is better)
Translates to: VCASKLHVFACMDFLPLQAAMNC*YSGPMT
Trigger: AGTCATGGGCCCGCTATAGCAGCAGTTCATAGCAGC...CTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp GCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTAATTGCTGCTGTCCCTaGACTGGTGCAACTGGTGGG +
Preference number: 4 (lower is better)
Translates to: ALLVCASKLHVFACMDFLNCCCP*TGATGG
Trigger: CCCACCAGTTGCACCAGTGCAGGGACAGCAGCAATT...AAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp TCATTGAAAGTTAGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAACTGGCCGGAGTATGTaGTTGCAGTTGGGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: SLKVRPQETPVLALLVCATGRSM*LQLGGL
Trigger: AAGCCCTCCCAACTGCAAGCACATACTCCGGCCAGT...TGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCTAACTTTCAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp AGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATCTCCTGCTCTGTCAATaGTGGAGTGTAGTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: RPQETPVLALLVCASKLHLLLCQ*WSVVSS
Trigger: GGAGGAAACTACACTCCAGCATTGACAGAGCAGGAG...ATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp GCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTTTCTGGCTGGGCCTCTaGGGCTTGTTGTTCAGTTGG +
Preference number: 4 (lower is better)
Translates to: ALLVCASKLHVFACMDFLFWLGL*GLLFSW
Trigger: CCAACTGAACAACAAGCCGCAGAGGCCCAGCCAGAA...AAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp GCTGCACCAGCCACACACAGGTCAGGTGGCCATGTCCCAGAGAGGCCCAGTGAGATCAATGATGTCAGCTaGTTTATCAGCATATATCCT +
Preference number: 4 (lower is better)
Translates to: AAPATHRSGGHVPERPSEINDVS*FISIYP
Trigger: AGGATATATGCTGATAAAGCAGCTGACATCATTGAT...CTCACTGGGCCTCTCTGGGACATGGCCACCTGACCTGTGTGTGGCTGGTGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp GTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGGGCTGCATGTCTTTGCTTaGATGGACTTCCTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: VCKQTACLCLHGLPSPPGLHVFA*MDFLPL
Trigger: GAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAG...CCCTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp ATGTTCCTAACAGGTAGCCCACTTGGTGCCAGGCTGCACCAGCCACACACAGGTGTTTGGTATTTAAGTTaGTCACCCCCATCCATCACC +
Preference number: 4 (lower is better)
Translates to: MFLTGSPLGARLHQPHTGVWYLS*SPPSIT
Trigger: GGTGATGGATGGGGGTGAGCAACTTAAATACCAAAC...ACCTGTGTGTGGCTGGTGCAGCCTGGCACCAAGTGGGCTACCTGTTAGGAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR GCA 90 bp AAGAATCCACACCAACGAGGGCAGGGATCAAGAAGAACTAAAGTAAGTATCAGGCCAGGCAGGGGAGGGTaGAGTGAGTTGAGATGGCGC +
Preference number: 4 (lower is better)
Translates to: KNPHQRGQGSRRTKVSIRPGRGG*SELRWR
Trigger: GCGCCATCTCAACTCACTGCACCCTCCCCTGCCTGG...CCTGATACTTACTTTAGTTCTTCTTGATCCCTGCCCTCGTTGGTGTGGATTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR CCA 90 bp CAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTTACACCGGTGACTCCTaGTCATCCAAACGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: QETPVLALLVCASKLHVFYTGDS*SSKRRF
Trigger: GAAGCGGCGTTTGGATGACCAGGAGTCACCGGTGTA...AAAGACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp CTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCTGCAACTGGTGGGGCTaGATGAGCATGACTCTGGAC +
Preference number: 4 (lower is better)
Translates to: LCWCVQANCMSLLAWTSFCNWWG*MSMTLD
Trigger: GTCCAGAGTCATGCTCATCCAGCCCCACCAGTTGCA...GAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp CCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCACGACTAATCACTCCTaGGGTGTCGATGCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: PQETPVLALLVCASKLHVTTNHS*GVDALR
Trigger: TCTCAGAGCATCGACACCCCAGGAGTGATTAGTCGT...GACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp CCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCGTATGTGCTTGCAGTTaGGAGGGCTTGCTGACTTTG +
Preference number: 4 (lower is better)
Translates to: PQETPVLALLVCASKLHVVCACS*EGLLTL
Trigger: CAAAGTCAGCAAGCCCTCCCAACTGCAAGCACATAC...GACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp GCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCAACGAGATTGTCACTaGTGTGTGAGGCTGGACCGG +
Preference number: 4 (lower is better)
Translates to: ALLVCASKLHVFACMDFLQRDCH*CVRLDR
Trigger: CCGGTCCAGCCTCACACACCAGTGACAATCTCGTTG...AAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp CAGGCTGTAGGTAAAACTTACTCTTTTGTTGGTTGCACTGGTGGGTTGGGACTTGGCAGCCATTCTGGCTaGGCCTCTGCGGCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: QAVGKTYSFVGCTGGLGLGSHSG*ASAACC
Trigger: ACAACAAGCCGCAGAGGCCCAGCCAGAATGGCTGCC...AAGTCCCAACCCACCAGTGCAACCAACAAAAGAGTAAGTTTTACCTACAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CCA 90 bp AACCTGCTGCTGCATATAATACAGGTTGGGTTTAGAGCTTGGAGCTCAGATGTCGGATGTCTGCGGATCTaGCAGCCATTCTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: NLLLHIIQVGFRAWSSDVGCLRI*QPFWLG
Trigger: GCCCAGCCAGAATGGCTGCCAGATCCGCAGACATCC...GACATCTGAGCTCCAAGCTCTAAACCCAACCTGTATTATATGCAGCAGCAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CCA 90 bp ATGTTCCTAACAGGTAGCCCACTTGGTGCCAGGCTGCACCAGCCACACACAGGTTTAAAGTTGATCCCCTaGTGGTCCAGAGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: MFLTGSPLGARLHQPHTGLKLIP*WSRDFK
Trigger: CTTGAAGTCTCTGGACCACCAGGGGATCAACTTTAA...ACCTGTGTGTGGCTGGTGCAGCCTGGCACCAAGTGGGCTACCTGTTAGGAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp AGGCCCACACACACATCCCCACACACACCCCAAGTTATCTGCTCTGGCTTTGCAGTCTGCCTCTTCACATaGTGGATAATCAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: RPTHTSPHTPQVICSGFAVCLFT*WIIRAA
Trigger: TGCTGCTCTGATTATCCACCATGTGAAGAGGCAGAC...TGCAAAGCCAGAGCAGATAACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp CCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTGGGAGGGGCTCAGTTaGTCTTTGTTCAGAAAGTCC +
Preference number: 4 (lower is better)
Translates to: PQETPVLALLVCASKLHVWEGLS*SLFRKS
Trigger: GGACTTTCTGAACAAAGACCAACTGAGCCCCTCCCA...GACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR TCA 90 bp CTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCTGAATTCCCGTAGCTaGCTGCATGGTCTCAGACAC +
Preference number: 4 (lower is better)
Translates to: LCWCVQANCMSLLAWTSFLNSRS*LHGLRH
Trigger: GTGTCTGAGACCATGCAGTCAGCTACGGGAATTCAG...GAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp CACAAAGCTCTTTTTGGCACCCTACACTTTGGCTCACAGTCTCTTCTCCCCAGTCTGAATTCCCGTAGCTaGCTGCATGGTCTCAGACAC +
Preference number: 4 (lower is better)
Translates to: HKALFGTLHFGSQSLLPSLNSRS*LHGLRH
Trigger: GTGTCTGAGACCATGCAGTCAGCTACGGGAATTCAG...ACTGGGGAGAAGAGACTGTGAGCCAAAGTGTAGGGTGCCAAAAAGAGCTTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR TCA 90 bp TCCCAGAGAGGCCCAGTGAGGCTTGAAAGGCATCTTCCTTGTTTCTTCAGTGTGGGGGCAAGAAGGTGTTaGATCCCATTATCAGATCGG +
Preference number: 4 (lower is better)
Translates to: SQRGPVRLERHLPCFFSVGARRC*IPLSDR
Trigger: CCGATCTGATAATGGGATTCAACACCTTCTTGCCCC...CACACTGAAGAAACAAGGAAGATGCCTTTCAAGCCTCACTGGGCCTCTCTGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp CCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTATGCTGCAGCTGTCTaGCAATGCTCTGGATCAGTT +
Preference number: 4 (lower is better)
Translates to: PQETPVLALLVCASKLHVYAAAV*QCSGSV
Trigger: AACTGATCCAGAGCATTGTCAGACAGCTGCAGCATA...GACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp TCCCAGAGAGGCCCAGTGAGGCTTGAAAGGCATCTTCCTTGTTTCTTCAGTGTGTGTTTCTTCAGTGTGTaGGTGCATAGGCCCACACAC +
Preference number: 4 (lower is better)
Translates to: SQRGPVRLERHLPCFFSVCFFSV*VHRPTH
Trigger: GTGTGTGGGCCTATGCACTCACACACTGAAGAAACA...CACACTGAAGAAACAAGGAAGATGCCTTTCAAGCCTCACTGGGCCTCTCTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp GTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGAGGCCCAGTGAGGCTTaGAAGGCATCTTCCTTGTTT +
Preference number: 4 (lower is better)
Translates to: VCASKLHVFACMDFLPLQRPSEA*KASSLF
Trigger: AAACAAGGAAGATGCCTTTCAAGCCTCACTGGGCCT...CTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp CAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTCATCCAGTCAAAGTGTaGACAGCATCCGGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: QETPVLALLVCASKLHVFHPVKV*TASGSL
Trigger: GAGGGAACCGGATGCTGTTCACACTTTGACTGGATG...AAAGACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp TCATTGAAAGTTAGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCACATCCAGTCAAAGTGTaGACAGCATCCGGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: SLKVRPQETPVLALLVCAHPVKV*TASGSL
Trigger: GAGGGAACCGGATGCTGTTCACACTTTGACTGGATG...TGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCTAACTTTCAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp AAAATTGTGTGTGTGTGTGCGTGTGTGTGTCAGAGAGTAAAGCTGGTGGATGGCGCTCATGCTCAGGGATaGACTACAAAACCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: KIVCVCACVCQRVKLVDGAHAQG*TTKPRP
Trigger: CGGCCGAGGTTTTGTAGTGCATCCCTGAGCATGAGC...GCCATCCACCAGCTTTACTCTCTGACACACACACGCACACACACACACAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360439.8
CDS-3UTR GCA 90 bp ATGTTCCTAACAGGTAGCCCACTTGGTGCCAGGCTGCACCAGCCACACACAGGTTTCATTCTGTGCTCATaGTCAGGGATGCACTACAAA +
Preference number: 4 (lower is better)
Translates to: MFLTGSPLGARLHQPHTGFILCS*SGMHYK
Trigger: TTTGTAGTGCATCCCTGAGCATGAGCACAGAATGAA...ACCTGTGTGTGGCTGGTGCAGCCTGGCACCAAGTGGGCTACCTGTTAGGAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp AAAAGGACAACTGATTTGAACTCGTTGAGGTTGAGAACCAGAGGAGAGAAAAGGCCAGGGATCCGACGCTaGTGGGCTGCATACACCGGT +
Preference number: 4 (lower is better)
Translates to: KRTTDLNSLRLRTRGEKRPGIRR*WAAYTG
Trigger: ACCGGTGTATGCAGCCCAGCAGCGTCGGATCCCTGG...CCTTTTCTCTCCTCTGGTTCTCAACCTCAACGAGTTCAAATCAGTTGTCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp ATACCAAAGAGTCCTGTGAGGAAGGTGGGTAAAAACTGGTGTTGTGCTTTGATACCAGGGATCCGACGCTaGTGGGCTGCATACACCGGT +
Preference number: 4 (lower is better)
Translates to: IPKSPVRKVGKNWCCALIPGIRR*WAAYTG
Trigger: ACCGGTGTATGCAGCCCAGCAGCGTCGGATCCCTGG...TATCAAAGCACAACACCAGTTTTTACCCACCTTCCTCACAGGACTCTTTGGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR GCA 90 bp GCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCATGGTCTCAGACACTaGTTCATACACAGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: ALLVCASKLHVFACMDFLHGLRH*FIHRRG
Trigger: GCCCCTCCTGTGTATGAAGCAGTGTCTGAGACCATG...AAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp TCATTGAAAGTTAGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAGCTGCTATGAACTGCTaGTATAGCGGGCCCATGACT +
Preference number: 4 (lower is better)
Translates to: SLKVRPQETPVLALLVCAAAMNC*YSGPMT
Trigger: AGTCATGGGCCCGCTATAGCAGCAGTTCATAGCAGC...TGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCTAACTTTCAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp CTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCATGGCTGCTATGAACTaGTGCTATAGCGGGCCCATG +
Preference number: 4 (lower is better)
Translates to: LCWCVQANCMSLLAWTSFMAAMN*CYSGPM
Trigger: CATGGGCCCGCTATAGCAGCAGTTCATAGCAGCCAT...GAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp CAAGTCAGACACTGCCCCAGCTTTGCCCTAAAATCTCATCCCACAAAGCTCTTTAATTGCTGCTGTCCCTaGACTGGTGCAACTGGTGGG +
Preference number: 4 (lower is better)
Translates to: QVRHCPSFALKSHPTKLFNCCCP*TGATGG
Trigger: CCCACCAGTTGCACCAGTGCAGGGACAGCAGCAATT...AAAGAGCTTTGTGGGATGAGATTTTAGGGCAAAGCTGGGGCAGTGTCTGACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR GCA 90 bp AAAATTGTGTGTGTGTGTGCGTGTGTGTGTCAGAGAGTAAAGCTGGTGGATGGCGAGGCTGTGGCTGGATaGCATGGGTGGGAATCTGAT +
Preference number: 4 (lower is better)
Translates to: KIVCVCACVCQRVKLVDGEAVAG*HGWESD
Trigger: ATCAGATTCCCACCCATGGCATCCAGCCACAGCCTC...GCCATCCACCAGCTTTACTCTCTGACACACACACGCACACACACACACAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp AAAATTGTGTGTGTGTGTGCGTGTGTGTGTCAGAGAGTAAAGCTGGTGGATGGCTTCTGGCTGGGCCTCTaGGGCTTGTTGTTCAGTTGG +
Preference number: 4 (lower is better)
Translates to: KIVCVCACVCQRVKLVDGFWLGL*GLLFSW
Trigger: CCAACTGAACAACAAGCCGCAGAGGCCCAGCCAGAA...GCCATCCACCAGCTTTACTCTCTGACACACACACGCACACACACACACAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp AGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATATTTTCGTAGGCTTCTaGACTCCGAAGAGCCTTTCG +
Preference number: 4 (lower is better)
Translates to: RPQETPVLALLVCASKLHIFVGF*TPKSLS
Trigger: CGAAAGGCTCTTCGGAGTGCAGAAGCCTACGAAAAT...ATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp AGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATTCTGATGTAGACGCTTaGTTACACGCTCATGGGACT +
Preference number: 4 (lower is better)
Translates to: RPQETPVLALLVCASKLHSDVDA*LHAHGT
Trigger: AGTCCCATGAGCGTGTAAGCAAGCGTCTACATCAGA...ATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp AGGCCCACACACACATCCCCACACACACCCCAAGTTATCTGCTCTGGCTTTGCAACACCCCAAGTTATCTaGTCTGGCTTTGCAGTTAAG +
Preference number: 4 (lower is better)
Translates to: RPTHTSPHTPQVICSGFATPQVI*SGFAVK
Trigger: CTTAACTGCAAAGCCAGAGCAGATAACTTGGGGTGT...TGCAAAGCCAGAGCAGATAACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp AGGCCCACACACACATCCCCACACACACCCCAAGTTATCTGCTCTGGCTTTGCACAAACTGCATGTCTTTaGTTGCATGGACTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: RPTHTSPHTPQVICSGFAQTACL*LHGLPS
Trigger: GGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTG...TGCAAAGCCAGAGCAGATAACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp GTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCACCACCTGGCCTCCGTaGGGCTGCACCGCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: VPIHLSIKSFSSLFCKCITTWPP*GCTAVG
Trigger: CCCAACAGCGGTGCAGCCCCACGGAGGCCAGGTGGT...GATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp GTACATCTGTTCATAGGTACTAAATCTGAAGCCACAGTACTATGGTACACAAGAACCACCTGGCCTCCGTaGGGCTGCACCGCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: VHLFIGTKSEATVLWYTRTTWPP*GCTAVG
Trigger: CCCAACAGCGGTGCAGCCCCACGGAGGCCAGGTGGT...TCTTGTGTACCATAGTACTGTGGCTTCAGATTTAGTACCTATGAACAGATGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360439.8
ENST00000394947.8
CDS-3UTR CCA 90 bp CTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCAAGAGACGAGCAACCTaGGCATACACCTCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LCWCVQANCMSLLAWTSFKRRAT*AYTSCS
Trigger: AGAGCAGGAGGTGTATGCCCAGGTTGCTCGTCTCTT...GAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp CCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCGTAAGGCTCGATAGCTaGAGCCCAATCGTTTACAAG +
Preference number: 4 (lower is better)
Translates to: PQETPVLALLVCASKLHVVRLDS*SPIVYK
Trigger: CTTGTAAACGATTGGGCTCCAGCTATCGAGCCTTAC...GACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp CCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCGTCTGCCTCTTCACATaGTGGATAATCAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: PQETPVLALLVCASKLHVVCLFT*WIIRAA
Trigger: TGCTGCTCTGATTATCCACCATGTGAAGAGGCAGAC...GACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp ATGTTCCTAACAGGTAGCCCACTTGGTGCCAGGCTGCACCAGCCACACACAGGTCTCAGGCAGAGAATCTaGTGCAGTCGCATAAAAATA +
Preference number: 4 (lower is better)
Translates to: MFLTGSPLGARLHQPHTGLRQRI*CSRIKI
Trigger: TATTTTTATGCGACTGCACCAGATTCTCTGCCTGAG...ACCTGTGTGTGGCTGGTGCAGCCTGGCACCAAGTGGGCTACCTGTTAGGAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp CAAGTCAGACACTGCCCCAGCTTTGCCCTAAAATCTCATCCCACAAAGCTCTTTATTAGCTGGGCGTGGTaGCATGCAGCTACTCAGGAG +
Preference number: 4 (lower is better)
Translates to: QVRHCPSFALKSHPTKLFISWAW*HAATQE
Trigger: CTCCTGAGTAGCTGCATGCCACCACGCCCAGCTAAT...AAAGAGCTTTGTGGGATGAGATTTTAGGGCAAAGCTGGGGCAGTGTCTGACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CCA 90 bp CCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCGTTGGGTTTAGAGCTTaGAGCTCAGATGTCAGACAG +
Preference number: 4 (lower is better)
Translates to: PQETPVLALLVCASKLHVVGFRA*SSDVRQ
Trigger: CTGTCTGACATCTGAGCTCCAAGCTCTAAACCCAAC...GACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR TCA 90 bp CAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGGTGTTACAGAGTACTaGATTCCCGTAGCTGACTGC +
Preference number: 4 (lower is better)
Translates to: QETPVLALLVCASKLHVFGVTEY*IPVADC
Trigger: GCAGTCAGCTACGGGAATTCAGTACTCTGTAACACC...AAAGACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp CCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCGGGGTGTCGATGCTCTaGGATTTAAATTCCTTCATG +
Preference number: 4 (lower is better)
Translates to: PQETPVLALLVCASKLHVGVSML*DLNSFM
Trigger: CATGAAGGAATTTAAATCTCAGAGCATCGACACCCC...GACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp TTTGCCCTAAAATCTCATCCCACAAAGCTCTTTTTGGCACCCTACACTTTGGCTGATCGGGGTGGCCTTTaGATAGCTGGGACACACGAC +
Preference number: 4 (lower is better)
Translates to: FALKSHPTKLFLAPYTLADRGGL*IAGTHD
Trigger: GTCGTGTGTCCCAGCTATTCAAAGGCCACCCCGATC...AGCCAAAGTGTAGGGTGCCAAAAAGAGCTTTGTGGGATGAGATTTTAGGGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR TCA 90 bp CAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTTCAGTTGGGGCTTCTTaGCAGTGCCTCCATGATCAT +
Preference number: 4 (lower is better)
Translates to: QETPVLALLVCASKLHVFSVGAS*QCLHDH
Trigger: ATGATCATGGAGGCACTGTCAAGAAGCCCCAACTGA...AAAGACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp AGGCCCACACACACATCCCCACACACACCCCAAGTTATCTGCTCTGGCTTTGCATGTAGGCATGAATGGTaGACATCTCTCTCAGTGAAT +
Preference number: 4 (lower is better)
Translates to: RPTHTSPHTPQVICSGFACRHEW*TSLSVN
Trigger: ATTCACTGAGAGAGATGTTCACCATTCATGCCTACA...TGCAAAGCCAGAGCAGATAACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp TGGGAAAAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCTCGCTCCACGTAGTCTaGCCAGCGCTCTGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: WEKFQLQLCKVFMFLTGSSLHVV*PALCFH
Trigger: GTGGAAGCAGAGCGCTGGTCAGACTACGTGGAGCGA...GCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTTTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp CAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTCAGGCCTGGAATCTCTaGTGTAGACGCTTGCTTACA +
Preference number: 4 (lower is better)
Translates to: QETPVLALLVCASKLHVFQAWNL*CRRLLT
Trigger: TGTAAGCAAGCGTCTACATCAGAGATTCCAGGCCTG...AAAGACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp CTAAAATCTCATCCCACAAAGCTCTTTTTGGCACCCTACACTTTGGCTCACAGTCCCAGAGAGGCCCAGTaGGGCTTGAAAGGCATCTTC +
Preference number: 4 (lower is better)
Translates to: LKSHPTKLFLAPYTLAHSPREAQ*GLKGIF
Trigger: GAAGATGCCTTTCAAGCCTCACTGGGCCTCTCTGGG...ACTGTGAGCCAAAGTGTAGGGTGCCAAAAAGAGCTTTGTGGGATGAGATTTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR TCA 90 bp CTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCATCCGGTTCCCTCATTaGAAGTTAGGCCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: LCWCVQANCMSLLAWTSFIRFPH*KLGHRR
Trigger: TCTCCTGTGGCCTAACTTTCAATGAGGGAACCGGAT...GAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp CAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTCAACATGACCTTTCTTaGGGGAACACGGGGATAGGT +
Preference number: 4 (lower is better)
Translates to: QETPVLALLVCASKLHVFQHDLS*GNTGIG
Trigger: ACCTATCCCCGTGTTCCCTCAAGAAAGGTCATGTTG...AAAGACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR TCA 90 bp TCATTGAAAGTTAGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCACTTGAAATCCTATCCTaGCCTGCAGGCAAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: SLKVRPQETPVLALLVCALEILS*PAGKCS
Trigger: AGAGCACTTGCCTGCAGGTCAGGATAGGATTTCAAG...TGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCTAACTTTCAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR GCA 90 bp TTTGCCCTAAAATCTCATCCCACAAAGCTCTTTTTGGCACCCTACACTTTGGCTGAAAAGCCTCTGTGCTaGCAGGGATCCGACGCTGCT +
Preference number: 4 (lower is better)
Translates to: FALKSHPTKLFLAPYTLAEKPLC*QGSDAA
Trigger: AGCAGCGTCGGATCCCTGGCAGCACAGAGGCTTTTC...AGCCAAAGTGTAGGGTGCCAAAAAGAGCTTTGTGGGATGAGATTTTAGGGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR GCA 90 bp AAGAATCCACACCAACGAGGGCAGGGATCAAGAAGAACTAAAGTAAGTATCAGGGAAAAGCCTCTGTGCTaGCAGGGATCCGACGCTGCT +
Preference number: 4 (lower is better)
Translates to: KNPHQRGQGSRRTKVSIREKPLC*QGSDAA
Trigger: AGCAGCGTCGGATCCCTGGCAGCACAGAGGCTTTTC...CCTGATACTTACTTTAGTTCTTCTTGATCCCTGCCCTCGTTGGTGTGGATTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR GCA 90 bp GCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTATTCCCGTAGCTGACTaGATGGTCTCAGACACTGCT +
Preference number: 4 (lower is better)
Translates to: ALLVCASKLHVFACMDFLIPVAD*MVSDTA
Trigger: AGCAGTGTCTGAGACCATGCAGTCAGCTACGGGAAT...AAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp AAAATTGTGTGTGTGTGTGCGTGTGTGTGTCAGAGAGTAAAGCTGGTGGATGGCATGGCTGCTATGAACTaGTGCTATAGCGGGCCCATG +
Preference number: 4 (lower is better)
Translates to: KIVCVCACVCQRVKLVDGMAAMN*CYSGPM
Trigger: CATGGGCCCGCTATAGCAGCAGTTCATAGCAGCCAT...GCCATCCACCAGCTTTACTCTCTGACACACACACGCACACACACACACAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp TGCATCTCCATCCAGTCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTACTGGCCGGAGTATGTaGTTGCAGTTGGGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: CISIQSKCEQHPVPSLKVTGRSM*LQLGGL
Trigger: AAGCCCTCCCAACTGCAAGCACATACTCCGGCCAGT...AACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGACTGGATGGAGATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp GCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCTCCTGCTCTGTCAATaGTGGAGTGTAGTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: ALLVCASKLHVFACMDFLLLLCQ*WSVVSS
Trigger: GGAGGAAACTACACTCCAGCATTGACAGAGCAGGAG...AAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp TCATTGAAAGTTAGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCACTCCTGCTCTGTCAATaGTGGAGTGTAGTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SLKVRPQETPVLALLVCALLLCQ*WSVVSS
Trigger: GGAGGAAACTACACTCCAGCATTGACAGAGCAGGAG...TGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCTAACTTTCAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp AGGCCCACACACACATCCCCACACACACCCCAAGTTATCTGCTCTGGCTTTGCAATGTTTGCTGGCATCTaGCATAGAAGAATCCTTCAG +
Preference number: 4 (lower is better)
Translates to: RPTHTSPHTPQVICSGFAMFAGI*HRRILQ
Trigger: CTGAAGGATTCTTCTATGGCAGATGCCAGCAAACAT...TGCAAAGCCAGAGCAGATAACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp TCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTAGGCCACAGGAGACTCCCCCAACACCATTGTaGTTCTTAACTGCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: SKCEQHPVPSLKVRPQETPPTPL*FLTAPV
Trigger: CACAGGGGCAGTTAAGAAGCACAATGGTGTTGGGGG...AGTCTCCTGTGGCCTAACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp CAGGCTGTAGGTAAAACTTACTCTTTTGTTGGTTGCACTGGTGGGTTGGGACTTCTTGCTGGTCTCTGCTaGCATTTCACGGGGCACATG +
Preference number: 4 (lower is better)
Translates to: QAVGKTYSFVGCTGGLGLLAGLC*HFTGHM
Trigger: CATGTGCCCCGTGAAATGGCAGCAGAGACCAGCAAG...AAGTCCCAACCCACCAGTGCAACCAACAAAAGAGTAAGTTTTACCTACAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR GCA 90 bp ATGTTCCTAACAGGTAGCCCACTTGGTGCCAGGCTGCACCAGCCACACACAGGTTTAATGCTCACAAAATaGAGGGTCTCTGTATCACAG +
Preference number: 4 (lower is better)
Translates to: MFLTGSPLGARLHQPHTGLMLTK*RVSVSQ
Trigger: CTGTGATACAGAGACCCTGCATTTTGTGAGCATTAA...ACCTGTGTGTGGCTGGTGCAGCCTGGCACCAAGTGGGCTACCTGTTAGGAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp GCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTAATCCTATCCTGACCTaGAGGCAAGTGCTCTGGACA +
Preference number: 4 (lower is better)
Translates to: ALLVCASKLHVFACMDFLNPILT*RQVLWT
Trigger: TGTCCAGAGCACTTGCCTGCAGGTCAGGATAGGATT...AAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CCA 90 bp CTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCCATCCAGTCACTGCTGTCCCTGCACTaGTGCAACTGGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LSIKSFSSLFCKCISIQSLLSLH*CNWWGW
Trigger: CCAGCCCCACCAGTTGCACCAGTGCAGGGACAGCAG...TGACTGGATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp TCCCAGAGAGGCCCAGTGAGGCTTGAAAGGCATCTTCCTTGTTTCTTCAGTGTGATTATCAGATCGGGGTaGCCTTTGAATAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: SQRGPVRLERHLPCFFSVIIRSG*PLNSWD
Trigger: GTCCCAGCTATTCAAAGGCCACCCCGATCTGATAAT...CACACTGAAGAAACAAGGAAGATGCCTTTCAAGCCTCACTGGGCCTCTCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp TGGGAAAAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCGACCGGCGGAGAACGTaGGGATGCATACGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: WEKFQLQLCKVFMFLTGSDRRRT*GCIRWK
Trigger: CTTCCACCGTATGCATCCCCACGTTCTCCGCCGGTC...GCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTTTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp AGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATTTCCTCCAGCTTCCTTaGCATTTCTCTGCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: RPQETPVLALLVCASKLHFLQLP*HFSALS
Trigger: AGAAAGAGCAGAGAAATGCCAAGGAAGCTGGAGGAA...ATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp TCCCAGAGAGGCCCAGTGAGGCTTGAAAGGCATCTTCCTTGTTTCTTCAGTGTGAAAGCACGGAGCTGTTaGCATCTGGTAGGAATTGTC +
Preference number: 4 (lower is better)
Translates to: SQRGPVRLERHLPCFFSVKARSC*HLVGIV
Trigger: GACAATTCCTACCAGATGCCAACAGCTCCGTGCTTT...CACACTGAAGAAACAAGGAAGATGCCTTTCAAGCCTCACTGGGCCTCTCTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp AAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCCCACTTATCTGGCAGCCATTCTaGCTGGGCCTCTGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: KFQLQLCKVFMFLTGSPLIWQPF*LGLCGL
Trigger: CAAGCCGCAGAGGCCCAGCCAGAATGGCTGCCAGAT...AAGTGGGCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp AAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCCCACTTGGATGTCTGCGGATCTaGCAGCCATTCTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: KFQLQLCKVFMFLTGSPLGCLRI*QPFWLG
Trigger: GCCCAGCCAGAATGGCTGCCAGATCCGCAGACATCC...AAGTGGGCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp CCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTGTGGCTCGCTCCTTTaGATAAGTTTCCAGATGTAC +
Preference number: 4 (lower is better)
Translates to: PQETPVLALLVCASKLHVCGSLL*ISFQMY
Trigger: GTACATCTGGAAACTTATCCAAAGGAGCGAGCCACA...GACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp CACAAAGCTCTTTTTGGCACCCTACACTTTGGCTCACAGTCTCTTCTCCCCAGTTCCGTCCTGTACACTTaGGCTGCTGGTAACTCTTTG +
Preference number: 4 (lower is better)
Translates to: HKALFGTLHFGSQSLLPSSVLYT*AAGNSL
Trigger: CAAAGAGTTACCAGCAGCCCAAGTGTACAGGACGGA...ACTGGGGAGAAGAGACTGTGAGCCAAAGTGTAGGGTGCCAAAAAGAGCTTTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CCA 90 bp AGGCCCACACACACATCCCCACACACACCCCAAGTTATCTGCTCTGGCTTTGCATGTCCAAGCGAAATTTaGCTTGTTCTTCAGCAGACA +
Preference number: 4 (lower is better)
Translates to: RPTHTSPHTPQVICSGFACPSEI*LVLQQT
Trigger: TGTCTGCTGAAGAACAAGCCAAATTTCGCTTGGACA...TGCAAAGCCAGAGCAGATAACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp AGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGAGAGATCACCTCTTTaGGCAAAGAGCAAATCTGGA +
Preference number: 4 (lower is better)
Translates to: RPQETPVLALLVCASKLHERSPL*AKSKSG
Trigger: TCCAGATTTGCTCTTTGCCCAAAGAGGTGATCTCTC...ATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp TCCCAGAGAGGCCCAGTGAGGCTTGAAAGGCATCTTCCTTGTTTCTTCAGTGTGTCCGCCGTAGATTCCTaGGGAGAAATACTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: SQRGPVRLERHLPCFFSVSAVDS*GEILVS
Trigger: AGAAACCAGTATTTCTCCCCAGGAATCTACGGCGGA...CACACTGAAGAAACAAGGAAGATGCCTTTCAAGCCTCACTGGGCCTCTCTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp ATACCAAAGAGTCCTGTGAGGAAGGTGGGTAAAAACTGGTGTTGTGCTTTGATAGGCTGCATACACCGGTaGCTCCTGGTCATCCAAACG +
Preference number: 4 (lower is better)
Translates to: IPKSPVRKVGKNWCCALIGCIHR*LLVIQT
Trigger: CGTTTGGATGACCAGGAGTCACCGGTGTATGCAGCC...TATCAAAGCACAACACCAGTTTTTACCCACCTTCCTCACAGGACTCTTTGGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR TCA 90 bp CTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCCATCCAGTCAAGCACCCGGTGCTGGTaGGGAAAAGCCTCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: LSIKSFSSLFCKCISIQSSTRCW*GKASVL
Trigger: CAGCACAGAGGCTTTTCCTCACCAGCACCGGGTGCT...TGACTGGATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp AAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCCCACTTGCTCTGTGGCATGGCTaGAACCTGGTAGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: KFQLQLCKVFMFLTGSPLALWHG*NLVAGC
Trigger: ACACCCAGCTACCAGGTTTCAGCCATGCCACAGAGC...AAGTGGGCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp ATACCAAAGAGTCCTGTGAGGAAGGTGGGTAAAAACTGGTGTTGTGCTTTGATAGCTCTGTGGCATGGCTaGAACCTGGTAGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: IPKSPVRKVGKNWCCALIALWHG*NLVAGC
Trigger: ACACCCAGCTACCAGGTTTCAGCCATGCCACAGAGC...TATCAAAGCACAACACCAGTTTTTACCCACCTTCCTCACAGGACTCTTTGGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR TCA 90 bp AACCTGCTGCTGCATATAATACAGGTTGGGTTTAGAGCTTGGAGCTCAGATGTCTCTTTGAGACGTAGCTaGATGGCAGGGCTGTCACTC +
Preference number: 4 (lower is better)
Translates to: NLLLHIIQVGFRAWSSDVSLRRS*MAGLSL
Trigger: GAGTGACAGCCCTGCCATTCAGCTACGTCTCAAAGA...GACATCTGAGCTCCAAGCTCTAAACCCAACCTGTATTATATGCAGCAGCAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR TCA 90 bp CTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCCATCCAGTCATCGCTCCACGTAGTCTaGCCAGCGCTCTGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LSIKSFSSLFCKCISIQSSLHVV*PALCFH
Trigger: GTGGAAGCAGAGCGCTGGTCAGACTACGTGGAGCGA...TGACTGGATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp GCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTAGGCGAGGTAGTATCTaGATTCATGTATCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: ALLVCASKLHVFACMDFLRRGSI*IHVSLH
Trigger: GTGGAGCGATACATGAATTCAGATACTACCTCGCCT...AAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp CAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTAGGCGAGGTAGTATCTaGATTCATGTATCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: QETPVLALLVCASKLHVFRRGSI*IHVSLH
Trigger: GTGGAGCGATACATGAATTCAGATACTACCTCGCCT...AAAGACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp TCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTAGGCCACAGGAGACTATCCGGTTCCCTCATTaGAAGTTAGGCCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: SKCEQHPVPSLKVRPQETIRFPH*KLGHRR
Trigger: TCTCCTGTGGCCTAACTTTCAATGAGGGAACCGGAT...AGTCTCCTGTGGCCTAACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp AAGAATCCACACCAACGAGGGCAGGGATCAAGAAGAACTAAAGTAAGTATCAGGGGCATAAGAATCACTTaGACCCAGGCAGGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: KNPHQRGQGSRRTKVSIRGIRIT*TQAGEG
Trigger: ACCCTCCCCTGCCTGGGTTCAAGTGATTCTTATGCC...CCTGATACTTACTTTAGTTCTTCTTGATCCCTGCCCTCGTTGGTGTGGATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR GCA 90 bp CTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCATTTTCGTAGGCTTCTaGACTCCGAAGAGCCTTTCG +
Preference number: 4 (lower is better)
Translates to: LCWCVQANCMSLLAWTSFIFVGF*TPKSLS
Trigger: CGAAAGGCTCTTCGGAGTGCAGAAGCCTACGAAAAT...GAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp ATGTTCCTAACAGGTAGCCCACTTGGTGCCAGGCTGCACCAGCCACACACAGGTATATATCCTCTGGAGTaGTTTTCTATGGATGACTTC +
Preference number: 4 (lower is better)
Translates to: MFLTGSPLGARLHQPHTGIYPLE*FSMDDF
Trigger: GAAGTCATCCATAGAAAAGCACTCCAGAGGATATAT...ACCTGTGTGTGGCTGGTGCAGCCTGGCACCAAGTGGGCTACCTGTTAGGAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp TGCATCTCCATCCAGTCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTCCCCCAACACCATTGTaGTTCTTAACTGCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: CISIQSKCEQHPVPSLKVPPTPL*FLTAPV
Trigger: CACAGGGGCAGTTAAGAAGCACAATGGTGTTGGGGG...AACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGACTGGATGGAGATGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp TGCATCTCCATCCAGTCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTGTGATGAGTCTATGTTaGCATCCAGCAGGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: CISIQSKCEQHPVPSLKVVMSLC*HPAGSA
Trigger: TGCGGAGCCTGCTGGATGGCAACATAGACTCATCAC...AACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGACTGGATGGAGATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp TCCCAGAGAGGCCCAGTGAGGCTTGAAAGGCATCTTCCTTGTTTCTTCAGTGTGTCATCACTCACGATATaGTGCAGCTGTCTGACAATG +
Preference number: 4 (lower is better)
Translates to: SQRGPVRLERHLPCFFSVSSLTI*CSCLTM
Trigger: CATTGTCAGACAGCTGCAGCATATCGTGAGTGATGA...CACACTGAAGAAACAAGGAAGATGCCTTTCAAGCCTCACTGGGCCTCTCTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp TGGGAAAAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCCCACTTGCTGGTCTCTaGTGCCATTTCACGGGGCAC +
Preference number: 4 (lower is better)
Translates to: WEKFQLQLCKVFMFLTGSPLAGL*CHFTGH
Trigger: GTGCCCCGTGAAATGGCAGCAGAGACCAGCAAGTGG...GCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTTTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp GTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGTGTGTGCAAGCAAACTaGATGTCTTTGCTTGCATGG +
Preference number: 4 (lower is better)
Translates to: VCASKLHVFACMDFLPLQCVQAN*MSLLAW
Trigger: CCATGCAAGCAAAGACATGCAGTTTGCTTGCACACA...CTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp GCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTAGCTCTGCTGGTGTGTaGAAGCAAACTGCATGTCTT +
Preference number: 4 (lower is better)
Translates to: ALLVCASKLHVFACMDFLSSAGV*KQTACL
Trigger: AAGACATGCAGTTTGCTTGCACACACCAGCAGAGCT...AAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp AAGAATCCACACCAACGAGGGCAGGGATCAAGAAGAACTAAAGTAAGTATCAGGACAAAACCGCAAAGCTaGTTCGGCCGCTCGTCACTG +
Preference number: 4 (lower is better)
Translates to: KNPHQRGQGSRRTKVSIRTKPQS*FGRSSL
Trigger: CAGTGACGAGCGGCCGAAGCAGCTTTGCGGTTTTGT...CCTGATACTTACTTTAGTTCTTCTTGATCCCTGCCCTCGTTGGTGTGGATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR CCA 90 bp AAAAGGACAACTGATTTGAACTCGTTGAGGTTGAGAACCAGAGGAGAGAAAAGGGGGCTGCACCGCTGTTaGGTGATGATGGCTGCTATG +
Preference number: 4 (lower is better)
Translates to: KRTTDLNSLRLRTRGEKRGLHRC*VMMAAM
Trigger: CATAGCAGCCATCATCACCCAACAGCGGTGCAGCCC...CCTTTTCTCTCCTCTGGTTCTCAACCTCAACGAGTTCAAATCAGTTGTCCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp ATACCAAAGAGTCCTGTGAGGAAGGTGGGTAAAAACTGGTGTTGTGCTTTGATAGGGCTGCACCGCTGTTaGGTGATGATGGCTGCTATG +
Preference number: 4 (lower is better)
Translates to: IPKSPVRKVGKNWCCALIGLHRC*VMMAAM
Trigger: CATAGCAGCCATCATCACCCAACAGCGGTGCAGCCC...TATCAAAGCACAACACCAGTTTTTACCCACCTTCCTCACAGGACTCTTTGGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR CCA 90 bp AGAAATCCTAACTCTATCTATGACTCACTCTATAACCCCAAATCCAAAACCTTTACCACCTGGCCTCCGTaGGGCTGCACCGCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: RNPNSIYDSLYNPKSKTFTTWPP*GCTAVG
Trigger: CCCAACAGCGGTGCAGCCCCACGGAGGCCAGGTGGT...AAAGGTTTTGGATTTGGGGTTATAGAGTGAGTCATAGATAGAGTTAGGATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR CCA 90 bp TCATTGAAAGTTAGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAATTATCAGATCGGGGTaGCCTTTGAATAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: SLKVRPQETPVLALLVCAIIRSG*PLNSWD
Trigger: GTCCCAGCTATTCAAAGGCCACCCCGATCTGATAAT...TGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCTAACTTTCAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp CCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTGCTTTGTAGATGTCTaGTTGGCCCTGAAATCTGTT +
Preference number: 4 (lower is better)
Translates to: PQETPVLALLVCASKLHVCFVDV*LALKSV
Trigger: AACAGATTTCAGGGCCAACCAGACATCTACAAAGCA...GACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp AACCTGCTGCTGCATATAATACAGGTTGGGTTTAGAGCTTGGAGCTCAGATGTCAAGAGACGAGCAACCTaGGCATACACCTCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: NLLLHIIQVGFRAWSSDVKRRAT*AYTSCS
Trigger: AGAGCAGGAGGTGTATGCCCAGGTTGCTCGTCTCTT...GACATCTGAGCTCCAAGCTCTAAACCCAACCTGTATTATATGCAGCAGCAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CCA 90 bp AAAATTGTGTGTGTGTGTGCGTGTGTGTGTCAGAGAGTAAAGCTGGTGGATGGCGGGTTTCTTCTTAACTaGAGGGGTGGTTCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: KIVCVCACVCQRVKLVDGGFLLN*RGGSCR
Trigger: CCTACAGGAACCACCCCTCCAGTTAAGAAGAAACCC...GCCATCCACCAGCTTTACTCTCTGACACACACACGCACACACACACACAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp GTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGTTAAAGTTGATCCCCTaGTGGTCCAGAGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: VCASKLHVFACMDFLPLQLKLIP*WSRDFK
Trigger: CTTGAAGTCTCTGGACCACCAGGGGATCAACTTTAA...CTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp CAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTTGCCTCTTCACATGGTaGATAATCAGAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: QETPVLALLVCASKLHVFCLFTW*IIRAAA
Trigger: TGCTGCTGCTCTGATTATCCACCATGTGAAGAGGCA...AAAGACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp AGCAAACATAAAACACACAGAACATTGCTGGTTACAACTAAGACTTGCGTAATGCTCCGGTGCCCAGACTaGGAAGGAGGGAGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: SKHKTHRTLLVTTKTCVMLRCPD*EGGREG
Trigger: TCCCTCCCTCCCTCCTTCCCAGTCTGGGCACCGGAG...CATTACGCAAGTCTTAGTTGTAACCAGCAATGTTCTGTGTGTTTTATGTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CCA 90 bp CCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCCACACAGAACATTGCTaGTTACAACTAAGACTTGCG +
Preference number: 4 (lower is better)
Translates to: PQETPVLALLVCASKLHVHTEHC*LQLRLA
Trigger: CGCAAGTCTTAGTTGTAACCAGCAATGTTCTGTGTG...GACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR TCA 90 bp CAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGGGGTGTCGATGCTCTaGGATTTAAATTCCTTCATG +
Preference number: 4 (lower is better)
Translates to: QETPVLALLVCASKLHVFGVSML*DLNSFM
Trigger: CATGAAGGAATTTAAATCTCAGAGCATCGACACCCC...AAAGACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp GACAAGGGACGTGGGTTGAGAGTTTATTCCTTAAGTAAGAACCAAGCTTTATTTAGTGGGGGAGTCTGCTaGCTGGCCGGAGTATGTGCT +
Preference number: 4 (lower is better)
Translates to: DKGRGLRVYSLSKNQALFSGGVC*LAGVCA
Trigger: AGCACATACTCCGGCCAGTCAGCAGACTCCCCCACT...AAATAAAGCTTGGTTCTTACTTAAGGAATAAACTCTCAACCCACGTCCCTTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR TCA 90 bp GCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTTTAAACTCCACAGGTTaGTTGTTCTGCAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: ALLVCASKLHVFACMDFLLNSTG*LFCKDG
Trigger: CCCATCCTTGCAGAACAATCAACCTGTGGAGTTTAA...AAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp CCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCAAGAATCCTTCAGATTaGGCAGTTTGGGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PQETPVLALLVCASKLHVKNPSD*AVWVSS
Trigger: AGAAGAAACCCAAACTGCTCAATCTGAAGGATTCTT...GACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp GTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGGGAAGAATCCTTCAGATTaGGCAGTTTGGGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: VCKQTACLCLHGLPSPPGKNPSD*AVWVSS
Trigger: AGAAGAAACCCAAACTGCTCAATCTGAAGGATTCTT...CCCTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp AACCTGCTGCTGCATATAATACAGGTTGGGTTTAGAGCTTGGAGCTCAGATGTCTCTATGGATGACTTCTaGTGTGCCCCCAAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: NLLLHIIQVGFRAWSSDVSMDDF*CAPKGV
Trigger: AACACCCTTGGGGGCACATCAGAAGTCATCCATAGA...GACATCTGAGCTCCAAGCTCTAAACCCAACCTGTATTATATGCAGCAGCAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR TCA 90 bp TCCCAGAGAGGCCCAGTGAGGCTTGAAAGGCATCTTCCTTGTTTCTTCAGTGTGTTCTCAGACCATCAATaGTGTCAGCTGCTTTATCAG +
Preference number: 4 (lower is better)
Translates to: SQRGPVRLERHLPCFFSVFSDHQ*CQLLYQ
Trigger: CTGATAAAGCAGCTGACATCATTGATGGTCTGAGAA...CACACTGAAGAAACAAGGAAGATGCCTTTCAAGCCTCACTGGGCCTCTCTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp TCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTAGGCCACAGGAGACTTATTTGTCCTCCTTCTaGATGCCTGTCTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SKCEQHPVPSLKVRPQETYLSSF*MPVCLF
Trigger: GAAGAGGCAGACAGGCATTCAGAAGGAGGACAAATA...AGTCTCCTGTGGCCTAACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp CAGGCTGTAGGTAAAACTTACTCTTTTGTTGGTTGCACTGGTGGGTTGGGACTTTGTTTCTTCAGTGTGTaGGTGCATAGGCCCACACAC +
Preference number: 4 (lower is better)
Translates to: QAVGKTYSFVGCTGGLGLCFFSV*VHRPTH
Trigger: GTGTGTGGGCCTATGCACTCACACACTGAAGAAACA...AAGTCCCAACCCACCAGTGCAACCAACAAAAGAGTAAGTTTTACCTACAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR TCA 90 bp TGCATCTCCATCCAGTCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTATCCGGTTCCCTCATTaGAAGTTAGGCCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: CISIQSKCEQHPVPSLKVIRFPH*KLGHRR
Trigger: TCTCCTGTGGCCTAACTTTCAATGAGGGAACCGGAT...AACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGACTGGATGGAGATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp GTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGTTCATTCTGTGCTCATaGTCAGGGATGCACTACAAA +
Preference number: 4 (lower is better)
Translates to: VCASKLHVFACMDFLPLQFILCS*SGMHYK
Trigger: TTTGTAGTGCATCCCTGAGCATGAGCACAGAATGAA...CTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp AAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCCCACTTCGCCGCTTCATTCTGTaGTCATGCTCAGGGATGCAC +
Preference number: 4 (lower is better)
Translates to: KFQLQLCKVFMFLTGSPLRRFIL*SCSGMH
Trigger: GTGCATCCCTGAGCATGAGCACAGAATGAAGCGGCG...AAGTGGGCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp ATACCAAAGAGTCCTGTGAGGAAGGTGGGTAAAAACTGGTGTTGTGCTTTGATACGCCGCTTCATTCTGTaGTCATGCTCAGGGATGCAC +
Preference number: 4 (lower is better)
Translates to: IPKSPVRKVGKNWCCALIRRFIL*SCSGMH
Trigger: GTGCATCCCTGAGCATGAGCACAGAATGAAGCGGCG...TATCAAAGCACAACACCAGTTTTTACCCACCTTCCTCACAGGACTCTTTGGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR GCA 90 bp ATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCCATCCTGTCCCTGCACTGGTaGAACTGGTGGGGCTGGATG +
Preference number: 4 (lower is better)
Translates to: IHLSIKSFSSLFCKCISILSLHW*NWWGWM
Trigger: CATCCAGCCCCACCAGTTGCACCAGTGCAGGGACAG...GATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp ATACCAAAGAGTCCTGTGAGGAAGGTGGGTAAAAACTGGTGTTGTGCTTTGATAAATTGCTGCTGTCCCTaGACTGGTGCAACTGGTGGG +
Preference number: 4 (lower is better)
Translates to: IPKSPVRKVGKNWCCALINCCCP*TGATGG
Trigger: CCCACCAGTTGCACCAGTGCAGGGACAGCAGCAATT...TATCAAAGCACAACACCAGTTTTTACCCACCTTCCTCACAGGACTCTTTGGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR GCA 90 bp TCCCAGAGAGGCCCAGTGAGGCTTGAAAGGCATCTTCCTTGTTTCTTCAGTGTGTCTCAGCAGTTGTTTTaGTTAAAAGCACGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: SQRGPVRLERHLPCFFSVSQQLF*LKARSC
Trigger: ACAGCTCCGTGCTTTTAAGCAAAACAACTGCTGAGA...CACACTGAAGAAACAAGGAAGATGCCTTTCAAGCCTCACTGGGCCTCTCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp GTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGATGTTTGCTGGCATCTaGCATAGAAGAATCCTTCAG +
Preference number: 4 (lower is better)
Translates to: VCASKLHVFACMDFLPLQMFAGI*HRRILQ
Trigger: CTGAAGGATTCTTCTATGGCAGATGCCAGCAAACAT...CTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp GTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGAAGCTTCTTCTGTATTaGTTCCAGAACCCGGATTGT +
Preference number: 4 (lower is better)
Translates to: VCASKLHVFACMDFLPLQKLLLY*FQNPDC
Trigger: ACAATCCGGGTTCTGGAAGCAATACAGAAGAAGCTT...CTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp GTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGGGAGGCAGAGAATCTGGTaGAGTCGCATAAAAATATAC +
Preference number: 4 (lower is better)
Translates to: VCKQTACLCLHGLPSPPGRQRIW*SRIKIY
Trigger: GTATATTTTTATGCGACTGCACCAGATTCTCTGCCT...CCCTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp GTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGGGTTTTCTTCTTCAATTTaGCGTTCGGCTTGGGAACAA +
Preference number: 4 (lower is better)
Translates to: VCKQTACLCLHGLPSPPGFSSSI*RSAWEQ
Trigger: TTGTTCCCAAGCCGAACGGCAAATTGAAGAAGAAAA...CCCTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp CAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTTCATCACTCACGATATaGTGCAGCTGTCTGACAATG +
Preference number: 4 (lower is better)
Translates to: QETPVLALLVCASKLHVFSSLTI*CSCLTM
Trigger: CATTGTCAGACAGCTGCAGCATATCGTGAGTGATGA...AAAGACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp CTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCATTTCACGGGGCACATaGTCCTTGGTCCATTTATCT +
Preference number: 4 (lower is better)
Translates to: LCWCVQANCMSLLAWTSFISRGT*SLVHLS
Trigger: AGATAAATGGACCAAGGAGCATGTGCCCCGTGAAAT...GAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp TGGGAAAAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCCTTGCTGGTCTCTGCTaGCATTTCACGGGGCACATG +
Preference number: 4 (lower is better)
Translates to: WEKFQLQLCKVFMFLTGSLAGLC*HFTGHM
Trigger: CATGTGCCCCGTGAAATGGCAGCAGAGACCAGCAAG...GCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTTTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp CAATTTACTGTACTAACCTGTAGCCAATCATATATGTGCTCAATAGAGAGTTCAGGTCACAGGCTCCGGTaGCCAGACTGGGAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: QFTVLTCSQSYMCSIESSGHRLR*PDWEGG
Trigger: CCCTCCTTCCCAGTCTGGGCACCGGAGCCTGTGACC...TGAACTCTCTATTGAGCACATATATGATTGGCTACAGGTTAGTACAGTAAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR GCA 90 bp AAAAGGACAACTGATTTGAACTCGTTGAGGTTGAGAACCAGAGGAGAGAAAAGGACAAAACCGCAAAGCTaGTTCGGCCGCTCGTCACTG +
Preference number: 4 (lower is better)
Translates to: KRTTDLNSLRLRTRGEKRTKPQS*FGRSSL
Trigger: CAGTGACGAGCGGCCGAAGCAGCTTTGCGGTTTTGT...CCTTTTCTCTCCTCTGGTTCTCAACCTCAACGAGTTCAAATCAGTTGTCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CCA 90 bp AAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCCCACTTTACACCGGTGACTCCTaGTCATCCAAACGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: KFQLQLCKVFMFLTGSPLYTGDS*SSKRRF
Trigger: GAAGCGGCGTTTGGATGACCAGGAGTCACCGGTGTA...AAGTGGGCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp CAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTTGGCCTTTGAATAGCTaGGACACACGACTAATCACT +
Preference number: 4 (lower is better)
Translates to: QETPVLALLVCASKLHVFWPLNS*DTRLIT
Trigger: AGTGATTAGTCGTGTGTCCCAGCTATTCAAAGGCCA...AAAGACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp TGGGAAAAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCCAACGAGATTGTCACTaGTGTGTGAGGCTGGACCGG +
Preference number: 4 (lower is better)
Translates to: WEKFQLQLCKVFMFLTGSQRDCH*CVRLDR
Trigger: CCGGTCCAGCCTCACACACCAGTGACAATCTCGTTG...GCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTTTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp TCATTGAAAGTTAGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCATTCCTCCAGCTTCCTTaGCATTTCTCTGCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SLKVRPQETPVLALLVCAFLQLP*HFSALS
Trigger: AGAAAGAGCAGAGAAATGCCAAGGAAGCTGGAGGAA...TGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCTAACTTTCAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp TGCATCTCCATCCAGTCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTGGCTTGTTGTTCAGTTaGGGCTTCTTGACAGTGCCT +
Preference number: 4 (lower is better)
Translates to: CISIQSKCEQHPVPSLKVGLLFS*GFLTVP
Trigger: AGGCACTGTCAAGAAGCCCCAACTGAACAACAAGCC...AACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGACTGGATGGAGATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp GTACATCTGTTCATAGGTACTAAATCTGAAGCCACAGTACTATGGTACACAAGAGGCAGCCATTCTGGCTaGGCCTCTGCGGCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: VHLFIGTKSEATVLWYTRGSHSG*ASAACC
Trigger: ACAACAAGCCGCAGAGGCCCAGCCAGAATGGCTGCC...TCTTGTGTACCATAGTACTGTGGCTTCAGATTTAGTACCTATGAACAGATGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360439.8
ENST00000394947.8
CDS-3UTR CCA 90 bp CAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTTGTGGCTCGCTCCTTTaGATAAGTTTCCAGATGTAC +
Preference number: 4 (lower is better)
Translates to: QETPVLALLVCASKLHVFCGSLL*ISFQMY
Trigger: GTACATCTGGAAACTTATCCAAAGGAGCGAGCCACA...AAAGACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp TCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTAGGCCACAGGAGACTGTAAGGCTCGATAGCTaGAGCCCAATCGTTTACAAG +
Preference number: 4 (lower is better)
Translates to: SKCEQHPVPSLKVRPQETVRLDS*SPIVYK
Trigger: CTTGTAAACGATTGGGCTCCAGCTATCGAGCCTTAC...AGTCTCCTGTGGCCTAACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp AAAATTGTGTGTGTGTGTGCGTGTGTGTGTCAGAGAGTAAAGCTGGTGGATGGCGTCTGCCTCTTCACATaGTGGATAATCAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: KIVCVCACVCQRVKLVDGVCLFT*WIIRAA
Trigger: TGCTGCTCTGATTATCCACCATGTGAAGAGGCAGAC...GCCATCCACCAGCTTTACTCTCTGACACACACACGCACACACACACACAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp AAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCCCACTTTCTCTGTATCACAGGTaGTGGTACAGGGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: KFQLQLCKVFMFLTGSPLSLYHR*WYRAPG
Trigger: GCCTGGTGCCCTGTACCACCACCTGTGATACAGAGA...AAGTGGGCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp ACCATGATAGTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTCACACACAGGTCAGGTaGCCATGTCCCAGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: TMIVPIHLSIKSFSSLFCHTQVR*PCPREA
Trigger: GGCCTCTCTGGGACATGGCCACCTGACCTGTGTGTG...ACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAACTATCATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp AGAAATCCTAACTCTATCTATGACTCACTCTATAACCCCAAATCCAAAACCTTTCTCCGGTGCCCAGACTaGGAAGGAGGGAGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: RNPNSIYDSLYNPKSKTFLRCPD*EGGREG
Trigger: TCCCTCCCTCCCTCCTTCCCAGTCTGGGCACCGGAG...AAAGGTTTTGGATTTGGGGTTATAGAGTGAGTCATAGATAGAGTTAGGATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR CCA 90 bp CTAAAATCTCATCCCACAAAGCTCTTTTTGGCACCCTACACTTTGGCTCACAGTTGGCACCCTACACTTTaGCTCACAGTCTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LKSHPTKLFLAPYTLAHSWHPTL*LTVSSP
Trigger: GGGAGAAGAGACTGTGAGCCAAAGTGTAGGGTGCCA...ACTGTGAGCCAAAGTGTAGGGTGCCAAAAAGAGCTTTGTGGGATGAGATTTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CCA 90 bp TCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTAGGCCACAGGAGACTCCACAAAGCTCTTTTTaGCACCCTACACTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: SKCEQHPVPSLKVRPQETPQSSF*HPTLWL
Trigger: GAGCCAAAGTGTAGGGTGCCAAAAAGAGCTTTGTGG...AGTCTCCTGTGGCCTAACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CCA 90 bp AAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCCCACTTTGCAGGCAAGTGCTCTaGACAAAACACTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: KFQLQLCKVFMFLTGSPLCRQVL*TKHCRG
Trigger: GCCCCTGCAGTGTTTTGTCCAGAGCACTTGCCTGCA...AAGTGGGCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CCA 90 bp AAGAATCCACACCAACGAGGGCAGGGATCAAGAAGAACTAAAGTAAGTATCAGGGCAATCTCTGCCTCCTaGGTTCCAACGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: KNPHQRGQGSRRTKVSIRAISAS*VPTILL
Trigger: CAGGAGAATCGTTGGAACCCAGGAGGCAGAGATTGC...CCTGATACTTACTTTAGTTCTTCTTGATCCCTGCCCTCGTTGGTGTGGATTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR TCA 90 bp GTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCGGCTGCATACACCGGTaGCTCCTGGTCATCCAAACG +
Preference number: 4 (lower is better)
Translates to: VPIHLSIKSFSSLFCKCIGCIHR*LLVIQT
Trigger: CGTTTGGATGACCAGGAGTCACCGGTGTATGCAGCC...GATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp AAGAATCCACACCAACGAGGGCAGGGATCAAGAAGAACTAAAGTAAGTATCAGGGGTGTTACAGAGTACTaGATTCCCGTAGCTGACTGC +
Preference number: 4 (lower is better)
Translates to: KNPHQRGQGSRRTKVSIRGVTEY*IPVADC
Trigger: GCAGTCAGCTACGGGAATTCAGTACTCTGTAACACC...CCTGATACTTACTTTAGTTCTTCTTGATCCCTGCCCTCGTTGGTGTGGATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR TCA 90 bp GACAAGGGACGTGGGTTGAGAGTTTATTCCTTAAGTAAGAACCAAGCTTTATTTATTGTCACTGGTGTGTaGGGCTGGACCGGCGGAGAA +
Preference number: 4 (lower is better)
Translates to: DKGRGLRVYSLSKNQALFIVTGV*GWTGGE
Trigger: TTCTCCGCCGGTCCAGCCTCACACACCAGTGACAAT...AAATAAAGCTTGGTTCTTACTTAAGGAATAAACTCTCAACCCACGTCCCTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR TCA 90 bp TCCCAGAGAGGCCCAGTGAGGCTTGAAAGGCATCTTCCTTGTTTCTTCAGTGTGAAGAATCCTTCAGATTaGGCAGTTTGGGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SQRGPVRLERHLPCFFSVKNPSD*AVWVSS
Trigger: AGAAGAAACCCAAACTGCTCAATCTGAAGGATTCTT...CACACTGAAGAAACAAGGAAGATGCCTTTCAAGCCTCACTGGGCCTCTCTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp CTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCTTCTCAGACCATCAATaGTGTCAGCTGCTTTATCAG +
Preference number: 4 (lower is better)
Translates to: LCWCVQANCMSLLAWTSFFSDHQ*CQLLYQ
Trigger: CTGATAAAGCAGCTGACATCATTGATGGTCTGAGAA...GAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp TCATTGAAAGTTAGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCATGTAGGCATGAATGGTaGACATCTCTCTCAGTGAAT +
Preference number: 4 (lower is better)
Translates to: SLKVRPQETPVLALLVCACRHEW*TSLSVN
Trigger: ATTCACTGAGAGAGATGTTCACCATTCATGCCTACA...TGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCTAACTTTCAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp TCCCAGAGAGGCCCAGTGAGGCTTGAAAGGCATCTTCCTTGTTTCTTCAGTGTGGCTAAAAAGGACAACTaGTTTGAACTCGTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: SQRGPVRLERHLPCFFSVAKKDN*FELVEV
Trigger: AACCTCAACGAGTTCAAATCAGTTGTCCTTTTTAGC...CACACTGAAGAAACAAGGAAGATGCCTTTCAAGCCTCACTGGGCCTCTCTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp CAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTTTGCGTAATGGTTGCTaGAGAAAAATCCACCAGAGT +
Preference number: 4 (lower is better)
Translates to: QETPVLALLVCASKLHVFLRNGC*RKIHQS
Trigger: ACTCTGGTGGATTTTTCTTCAGCAACCATTACGCAA...AAAGACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR TCA 90 bp AAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCCCACTTCTCCTGAACTGGCCTTaGAATCCTATCCTGACCTGC +
Preference number: 4 (lower is better)
Translates to: KFQLQLCKVFMFLTGSPLLLNWP*NPILTC
Trigger: GCAGGTCAGGATAGGATTTCAAGGCCAGTTCAGGAG...AAGTGGGCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR TCA 90 bp ATACCAAAGAGTCCTGTGAGGAAGGTGGGTAAAAACTGGTGTTGTGCTTTGATAAGAACATTACAGGCATaGGCTGGGCATAGTGGCTCG +
Preference number: 4 (lower is better)
Translates to: IPKSPVRKVGKNWCCALIRTLQA*AGHSGS
Trigger: CGAGCCACTATGCCCAGCTCATGCCTGTAATGTTCT...TATCAAAGCACAACACCAGTTTTTACCCACCTTCCTCACAGGACTCTTTGGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR TCA 90 bp ATACCAAAGAGTCCTGTGAGGAAGGTGGGTAAAAACTGGTGTTGTGCTTTGATACCTGCCTCAGCCTCCTaGGTAGCTGGGATTATTACA +
Preference number: 4 (lower is better)
Translates to: IPKSPVRKVGKNWCCALIPASAS*VAGIIT
Trigger: TGTAATAATCCCAGCTACTCAGGAGGCTGAGGCAGG...TATCAAAGCACAACACCAGTTTTTACCCACCTTCCTCACAGGACTCTTTGGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR GCA 90 bp CTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCTTCATTCTGTGCTCATaGTCAGGGATGCACTACAAA +
Preference number: 4 (lower is better)
Translates to: LCWCVQANCMSLLAWTSFFILCS*SGMHYK
Trigger: TTTGTAGTGCATCCCTGAGCATGAGCACAGAATGAA...GAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp GTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCGAGGAAAAGCCTCTGTaGTGCCAGGGATCCGACGCT +
Preference number: 4 (lower is better)
Translates to: VPIHLSIKSFSSLFCKCIEEKPL*CQGSDA
Trigger: AGCGTCGGATCCCTGGCAGCACAGAGGCTTTTCCTC...GATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp ATACCAAAGAGTCCTGTGAGGAAGGTGGGTAAAAACTGGTGTTGTGCTTTGATACATGGTCTCAGACACTaGTTCATACACAGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: IPKSPVRKVGKNWCCALIHGLRH*FIHRRG
Trigger: GCCCCTCCTGTGTATGAAGCAGTGTCTGAGACCATG...TATCAAAGCACAACACCAGTTTTTACCCACCTTCCTCACAGGACTCTTTGGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR GCA 90 bp TCATTGAAAGTTAGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCATCTCAGCAGTTGTTTTaGTTAAAAGCACGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: SLKVRPQETPVLALLVCASQQLF*LKARSC
Trigger: ACAGCTCCGTGCTTTTAAGCAAAACAACTGCTGAGA...TGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCTAACTTTCAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp TGCATCTCCATCCAGTCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTAAAGGAGAGACTAGTTaGACAAGCTCAGCACGAGAG +
Preference number: 4 (lower is better)
Translates to: CISIQSKCEQHPVPSLKVKGETS*TSSARE
Trigger: CTCTCGTGCTGAGCTTGTGCAACTAGTCTCTCCTTT...AACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGACTGGATGGAGATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp GCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTAAGCTTCTTCTGTATTaGTTCCAGAACCCGGATTGT +
Preference number: 4 (lower is better)
Translates to: ALLVCASKLHVFACMDFLKLLLY*FQNPDC
Trigger: ACAATCCGGGTTCTGGAAGCAATACAGAAGAAGCTT...AAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp TGGGAAAAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCGTGATGAGTCTATGTTaGCATCCAGCAGGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: WEKFQLQLCKVFMFLTGSVMSLC*HPAGSA
Trigger: TGCGGAGCCTGCTGGATGGCAACATAGACTCATCAC...GCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTTTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp AAAATTGTGTGTGTGTGTGCGTGTGTGTGTCAGAGAGTAAAGCTGGTGGATGGCTCATCACTCACGATATaGTGCAGCTGTCTGACAATG +
Preference number: 4 (lower is better)
Translates to: KIVCVCACVCQRVKLVDGSSLTI*CSCLTM
Trigger: CATTGTCAGACAGCTGCAGCATATCGTGAGTGATGA...GCCATCCACCAGCTTTACTCTCTGACACACACACGCACACACACACACAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp TTTGCCCTAAAATCTCATCCCACAAAGCTCTTTTTGGCACCCTACACTTTGGCTGCTCATGCTCAGGGATaGACTACAAAACCGCAAAGC +
Preference number: 4 (lower is better)
Translates to: FALKSHPTKLFLAPYTLAAHAQG*TTKPQS
Trigger: GCTTTGCGGTTTTGTAGTGCATCCCTGAGCATGAGC...AGCCAAAGTGTAGGGTGCCAAAAAGAGCTTTGTGGGATGAGATTTTAGGGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CCA 90 bp CCTAACTCTATCTATGACTCACTCTATAACCCCAAATCCAAAACCTTTCCTTGTCTGCACTGGTGCAACTaGTGGGGCTGGATGAGCATG +
Preference number: 4 (lower is better)
Translates to: PNSIYDSLYNPKSKTFPCLHWCN*WGWMSM
Trigger: CATGCTCATCCAGCCCCACCAGTTGCACCAGTGCAG...ACAAGGAAAGGTTTTGGATTTGGGGTTATAGAGTGAGTCATAGATAGAGTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR CCA 90 bp AGAAATCCTAACTCTATCTATGACTCACTCTATAACCCCAAATCCAAAACCTTTCTGCTGTCCCTGCACTaGTGCAACTGGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RNPNSIYDSLYNPKSKTFLLSLH*CNWWGW
Trigger: CCAGCCCCACCAGTTGCACCAGTGCAGGGACAGCAG...AAAGGTTTTGGATTTGGGGTTATAGAGTGAGTCATAGATAGAGTTAGGATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR CCA 90 bp CAAGTCAGACACTGCCCCAGCTTTGCCCTAAAATCTCATCCCACAAAGCTCTTTTGGCCTTTGAATAGCTaGGACACACGACTAATCACT +
Preference number: 4 (lower is better)
Translates to: QVRHCPSFALKSHPTKLFWPLNS*DTRLIT
Trigger: AGTGATTAGTCGTGTGTCCCAGCTATTCAAAGGCCA...AAAGAGCTTTGTGGGATGAGATTTTAGGGCAAAGCTGGGGCAGTGTCTGACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CCA 90 bp CTAAAATCTCATCCCACAAAGCTCTTTTTGGCACCCTACACTTTGGCTCACAGTGTATGTGCTTGCAGTTaGGAGGGCTTGCTGACTTTG +
Preference number: 4 (lower is better)
Translates to: LKSHPTKLFLAPYTLAHSVCACS*EGLLTL
Trigger: CAAAGTCAGCAAGCCCTCCCAACTGCAAGCACATAC...ACTGTGAGCCAAAGTGTAGGGTGCCAAAAAGAGCTTTGTGGGATGAGATTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CCA 90 bp GTACATCTGTTCATAGGTACTAAATCTGAAGCCACAGTACTATGGTACACAAGAGGGGAGTCTGCTGACTaGCCGGAGTATGTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: VHLFIGTKSEATVLWYTRGESAD*PEYVLA
Trigger: TGCAAGCACATACTCCGGCCAGTCAGCAGACTCCCC...TCTTGTGTACCATAGTACTGTGGCTTCAGATTTAGTACCTATGAACAGATGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360439.8
ENST00000394947.8
CDS-3UTR CCA 90 bp ATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCCATCGGGGAGTCTGCTGACTaGCCGGAGTATGTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: IHLSIKSFSSLFCKCISIGESAD*PEYVLA
Trigger: TGCAAGCACATACTCCGGCCAGTCAGCAGACTCCCC...GATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp ACCATGATAGTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTTGGGGATGCATACGGTaGAAGTGGGGGAGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: TMIVPIHLSIKSFSSLFCWGCIR*KWGSLL
Trigger: CAGCAGACTCCCCCACTTCCACCGTATGCATCCCCA...ACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAACTATCATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp CTAAAATCTCATCCCACAAAGCTCTTTTTGGCACCCTACACTTTGGCTCACAGTATTGTTCTGCAAGGATaGGGCCGTTCCCAACGAGAT +
Preference number: 4 (lower is better)
Translates to: LKSHPTKLFLAPYTLAHSIVLQG*GRSQRD
Trigger: ATCTCGTTGGGAACGGCCCCATCCTTGCAGAACAAT...ACTGTGAGCCAAAGTGTAGGGTGCCAAAAAGAGCTTTGTGGGATGAGATTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CCA 90 bp CAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTTGCTTTGTAGATGTCTaGTTGGCCCTGAAATCTGTT +
Preference number: 4 (lower is better)
Translates to: QETPVLALLVCASKLHVFCFVDV*LALKSV
Trigger: AACAGATTTCAGGGCCAACCAGACATCTACAAAGCA...AAAGACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp TCATTGAAAGTTAGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCATGTCCAAGCGAAATTTaGCTTGTTCTTCAGCAGACA +
Preference number: 4 (lower is better)
Translates to: SLKVRPQETPVLALLVCACPSEI*LVLQQT
Trigger: TGTCTGCTGAAGAACAAGCCAAATTTCGCTTGGACA...TGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCTAACTTTCAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp TGCATCTCCATCCAGTCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTTGCCTCTTCACATGGTaGATAATCAGAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: CISIQSKCEQHPVPSLKVCLFTW*IIRAAA
Trigger: TGCTGCTGCTCTGATTATCCACCATGTGAAGAGGCA...AACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGACTGGATGGAGATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp CTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCTGTCTGACAATGCTCTaGATCAGTTTGTCCATGGTA +
Preference number: 4 (lower is better)
Translates to: LCWCVQANCMSLLAWTSFCLTML*ISLSMV
Trigger: TACCATGGACAAACTGATCCAGAGCATTGTCAGACA...GAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp TGCATCTCCATCCAGTCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTTCCGCCGTAGATTCCTaGGGAGAAATACTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: CISIQSKCEQHPVPSLKVSAVDS*GEILVS
Trigger: AGAAACCAGTATTTCTCCCCAGGAATCTACGGCGGA...AACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGACTGGATGGAGATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp AACCTGCTGCTGCATATAATACAGGTTGGGTTTAGAGCTTGGAGCTCAGATGTCTTTTGTTGGTTGCACTaGTGGGTTGGGACTTTCTCC +
Preference number: 4 (lower is better)
Translates to: NLLLHIIQVGFRAWSSDVFCWLH*WVGTFS
Trigger: GGAGAAAGTCCCAACCCACCAGTGCAACCAACAAAA...GACATCTGAGCTCCAAGCTCTAAACCCAACCTGTATTATATGCAGCAGCAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394947.8
3UTR CAA 72 bp AGCTTTGCCCTAAAATCTCATCCCACAAAGCTCTTTTaGGCACCCTACACTTTGGCTCACAGTCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SFALKSHPTKLF*APYTLAHSLFS
Trigger: GGAGAAGAGACTGTGAGCCAAAGTGTAGGGTGCCAAAAAGAGCTTTGTGGGATGAGATTTTAGGGCAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR TCA 90 bp GTACATCTGTTCATAGGTACTAAATCTGAAGCCACAGTACTATGGTACACAAGATCCACCTTCAGCCTCTaGAATTGCTGCTGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: VHLFIGTKSEATVLWYTRSTFSL*NCCCPC
Trigger: GCAGGGACAGCAGCAATTTCAGAGGCTGAAGGTGGA...TCTTGTGTACCATAGTACTGTGGCTTCAGATTTAGTACCTATGAACAGATGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360439.8
ENST00000394947.8
CDS-3UTR TCA 90 bp AAAATTGTGTGTGTGTGTGCGTGTGTGTGTCAGAGAGTAAAGCTGGTGGATGGCATGTCTGGTTGGCCCTaGAATCTGTTCTTGATCTTA +
Preference number: 4 (lower is better)
Translates to: KIVCVCACVCQRVKLVDGMSGWP*NLFLIL
Trigger: TAAGATCAAGAACAGATTTCAGGGCCAACCAGACAT...GCCATCCACCAGCTTTACTCTCTGACACACACACGCACACACACACACAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp TCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTAGGCCACAGGAGACTATGTCTGGTTGGCCCTaGAATCTGTTCTTGATCTTA +
Preference number: 4 (lower is better)
Translates to: SKCEQHPVPSLKVRPQETMSGWP*NLFLIL
Trigger: TAAGATCAAGAACAGATTTCAGGGCCAACCAGACAT...AGTCTCCTGTGGCCTAACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp AAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCCCACTTTCAGTTGGGGCTTCTTaGCAGTGCCTCCATGATCAT +
Preference number: 4 (lower is better)
Translates to: KFQLQLCKVFMFLTGSPLSVGAS*QCLHDH
Trigger: ATGATCATGGAGGCACTGTCAAGAAGCCCCAACTGA...AAGTGGGCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp AAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCCCACTTTCTATGGATGACTTCTaGTGTGCCCCCAAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: KFQLQLCKVFMFLTGSPLSMDDF*CAPKGV
Trigger: AACACCCTTGGGGGCACATCAGAAGTCATCCATAGA...AAGTGGGCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp TGGGAAAAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCTCTATGGATGACTTCTaGTGTGCCCCCAAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: WEKFQLQLCKVFMFLTGSSMDDF*CAPKGV
Trigger: AACACCCTTGGGGGCACATCAGAAGTCATCCATAGA...GCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTTTTCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp GTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGTATAGTCCTCTGATTTaGTCACATACACCATCTTGT +
Preference number: 4 (lower is better)
Translates to: VCASKLHVFACMDFLPLQYSPLI*SHTPSC
Trigger: ACAAGATGGTGTATGTGATCAAATCAGAGGACTATA...CTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp TCATTGAAAGTTAGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAGCTAAAAAGGACAACTaGTTTGAACTCGTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: SLKVRPQETPVLALLVCAAKKDN*FELVEV
Trigger: AACCTCAACGAGTTCAAATCAGTTGTCCTTTTTAGC...TGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCTAACTTTCAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp GTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTTGAGGCCAGGAGTTTaGGACCAACCTGGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: VPIHLSIKSFSSLFCKCILRPGV*DQPGQH
Trigger: ATGCTGCCCAGGTTGGTCTCAAACTCCTGGCCTCAA...GATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR TCA 90 bp TGGGAAAAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCGGTTCCAGGTCAACATaGCCTTTCTTGAGGGAACAC +
Preference number: 4 (lower is better)
Translates to: WEKFQLQLCKVFMFLTGSGSRST*PFLREH
Trigger: GTGTTCCCTCAAGAAAGGTCATGTTGACCTGGAACC...GCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTTTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR TCA 90 bp CCTAACTCTATCTATGACTCACTCTATAACCCCAAATCCAAAACCTTTCCTTGTACCACCTTCAGCCTCTaGAATTGCTGCTGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: PNSIYDSLYNPKSKTFPCTTFSL*NCCCPC
Trigger: GCAGGGACAGCAGCAATTTCAGAGGCTGAAGGTGGT...ACAAGGAAAGGTTTTGGATTTGGGGTTATAGAGTGAGTCATAGATAGAGTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR TCA 90 bp AAGAATCCACACCAACGAGGGCAGGGATCAAGAAGAACTAAAGTAAGTATCAGGCTCTGGATCAGGCACTaGTGCCAAGATAGGAAACAT +
Preference number: 4 (lower is better)
Translates to: KNPHQRGQGSRRTKVSIRLWIRH*CQDRKH
Trigger: ATGTTTCCTATCTTGGCATCAGTGCCTGATCCAGAG...CCTGATACTTACTTTAGTTCTTCTTGATCCCTGCCCTCGTTGGTGTGGATTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR TCA 90 bp CAATTTACTGTACTAACCTGTAGCCAATCATATATGTGCTCAATAGAGAGTTCAGGAGGGTGGATCCCTTaGGGCCAGGAGTTTGAGAGC +
Preference number: 4 (lower is better)
Translates to: QFTVLTCSQSYMCSIESSGGWIP*GQEFES
Trigger: GCTCTCAAACTCCTGGCCTCAAGGGATCCACCCTCC...TGAACTCTCTATTGAGCACATATATGATTGGCTACAGGTTAGTACAGTAAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR GCA 90 bp ACCATGATAGTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTCGCCGCTTCATTCTGTaGTCATGCTCAGGGATGCAC +
Preference number: 4 (lower is better)
Translates to: TMIVPIHLSIKSFSSLFCRRFIL*SCSGMH
Trigger: GTGCATCCCTGAGCATGAGCACAGAATGAAGCGGCG...ACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAACTATCATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp TGGGAAAAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCATTCCCGTAGCTGACTaGATGGTCTCAGACACTGCT +
Preference number: 4 (lower is better)
Translates to: WEKFQLQLCKVFMFLTGSIPVAD*MVSDTA
Trigger: AGCAGTGTCTGAGACCATGCAGTCAGCTACGGGAAT...GCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTTTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp CAATTTACTGTACTAACCTGTAGCCAATCATATATGTGCTCAATAGAGAGTTCACTGTCCCTGCACTGGTaGAACTGGTGGGGCTGGATG +
Preference number: 4 (lower is better)
Translates to: QFTVLTCSQSYMCSIESSLSLHW*NWWGWM
Trigger: CATCCAGCCCCACCAGTTGCACCAGTGCAGGGACAG...TGAACTCTCTATTGAGCACATATATGATTGGCTACAGGTTAGTACAGTAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR GCA 90 bp GTACATCTGTTCATAGGTACTAAATCTGAAGCCACAGTACTATGGTACACAAGAAATTGCTGCTGTCCCTaGACTGGTGCAACTGGTGGG +
Preference number: 4 (lower is better)
Translates to: VHLFIGTKSEATVLWYTRNCCCP*TGATGG
Trigger: CCCACCAGTTGCACCAGTGCAGGGACAGCAGCAATT...TCTTGTGTACCATAGTACTGTGGCTTCAGATTTAGTACCTATGAACAGATGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360439.8
ENST00000394947.8
CDS-3UTR GCA 90 bp GTACATCTGTTCATAGGTACTAAATCTGAAGCCACAGTACTATGGTACACAAGAACTGGCCGGAGTATGTaGTTGCAGTTGGGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: VHLFIGTKSEATVLWYTRTGRSM*LQLGGL
Trigger: AAGCCCTCCCAACTGCAAGCACATACTCCGGCCAGT...TCTTGTGTACCATAGTACTGTGGCTTCAGATTTAGTACCTATGAACAGATGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360439.8
ENST00000394947.8
CDS-3UTR GCA 90 bp TCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTAGGCCACAGGAGACTATGTTTGCTGGCATCTaGCATAGAAGAATCCTTCAG +
Preference number: 4 (lower is better)
Translates to: SKCEQHPVPSLKVRPQETMFAGI*HRRILQ
Trigger: CTGAAGGATTCTTCTATGGCAGATGCCAGCAAACAT...AGTCTCCTGTGGCCTAACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp CTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCCATCCAGTCACCCCCAACACCATTGTaGTTCTTAACTGCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: LSIKSFSSLFCKCISIQSPPTPL*FLTAPV
Trigger: CACAGGGGCAGTTAAGAAGCACAATGGTGTTGGGGG...TGACTGGATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp CTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCTTTTCTTCTTCAATTTaGCGTTCGGCTTGGGAACAA +
Preference number: 4 (lower is better)
Translates to: LCWCVQANCMSLLAWTSFFSSSI*RSAWEQ
Trigger: TTGTTCCCAAGCCGAACGGCAAATTGAAGAAGAAAA...GAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp ACCATGATAGTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTCTTGCTGGTCTCTGCTaGCATTTCACGGGGCACATG +
Preference number: 4 (lower is better)
Translates to: TMIVPIHLSIKSFSSLFCLAGLC*HFTGHM
Trigger: CATGTGCCCCGTGAAATGGCAGCAGAGACCAGCAAG...ACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAACTATCATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp AACCTGCTGCTGCATATAATACAGGTTGGGTTTAGAGCTTGGAGCTCAGATGTCACACCCCAAGTTATCTaGTCTGGCTTTGCAGTTAAG +
Preference number: 4 (lower is better)
Translates to: NLLLHIIQVGFRAWSSDVTPQVI*SGFAVK
Trigger: CTTAACTGCAAAGCCAGAGCAGATAACTTGGGGTGT...GACATCTGAGCTCCAAGCTCTAAACCCAACCTGTATTATATGCAGCAGCAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR GCA 90 bp ATACCAAAGAGTCCTGTGAGGAAGGTGGGTAAAAACTGGTGTTGTGCTTTGATAGCTCATGCTCAGGGATaGACTACAAAACCGCAAAGC +
Preference number: 4 (lower is better)
Translates to: IPKSPVRKVGKNWCCALIAHAQG*TTKPQS
Trigger: GCTTTGCGGTTTTGTAGTGCATCCCTGAGCATGAGC...TATCAAAGCACAACACCAGTTTTTACCCACCTTCCTCACAGGACTCTTTGGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR GCA 90 bp GTTTCTACCCTGGATAAGGAACTGAAGTCAAAATCCCTGCTTCACAGTATTTTCCGCCAAGTCAGACACTaGCCCAGCTTTGCCCTAAAA +
Preference number: 4 (lower is better)
Translates to: VSTLDKELKSKSLLHSIFRQVRH*PSFALK
Trigger: TTTTAGGGCAAAGCTGGGGCAGTGTCTGACTTGGCG...GAAAATACTGTGAAGCAGGGATTTTGACTTCAGTTCCTTATCCAGGGTAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR GCA 90 bp ACCATGATAGTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTCTCTGGACAAAACACTaGAGGGGCAGCAACAGCTGG +
Preference number: 4 (lower is better)
Translates to: TMIVPIHLSIKSFSSLFCLWTKH*RGSNSW
Trigger: CCAGCTGTTGCTGCCCCTGCAGTGTTTTGTCCAGAG...ACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAACTATCATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CCA 90 bp CCTAACTCTATCTATGACTCACTCTATAACCCCAAATCCAAAACCTTTCCTTGTTACACCGGTGACTCCTaGTCATCCAAACGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: PNSIYDSLYNPKSKTFPCYTGDS*SSKRRF
Trigger: GAAGCGGCGTTTGGATGACCAGGAGTCACCGGTGTA...ACAAGGAAAGGTTTTGGATTTGGGGTTATAGAGTGAGTCATAGATAGAGTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR CCA 90 bp AAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCCCACTTGTATGTGCTTGCAGTTaGGAGGGCTTGCTGACTTTG +
Preference number: 4 (lower is better)
Translates to: KFQLQLCKVFMFLTGSPLVCACS*EGLLTL
Trigger: CAAAGTCAGCAAGCCCTCCCAACTGCAAGCACATAC...AAGTGGGCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp ACCATGATAGTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTCAACGAGATTGTCACTaGTGTGTGAGGCTGGACCGG +
Preference number: 4 (lower is better)
Translates to: TMIVPIHLSIKSFSSLFCQRDCH*CVRLDR
Trigger: CCGGTCCAGCCTCACACACCAGTGACAATCTCGTTG...ACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAACTATCATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp AAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCCCACTTGGCTTGTTGTTCAGTTaGGGCTTCTTGACAGTGCCT +
Preference number: 4 (lower is better)
Translates to: KFQLQLCKVFMFLTGSPLGLLFS*GFLTVP
Trigger: AGGCACTGTCAAGAAGCCCCAACTGAACAACAAGCC...AAGTGGGCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp TCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTAGGCCACAGGAGACTTGTCCAAGCGAAATTTaGCTTGTTCTTCAGCAGACA +
Preference number: 4 (lower is better)
Translates to: SKCEQHPVPSLKVRPQETCPSEI*LVLQQT
Trigger: TGTCTGCTGAAGAACAAGCCAAATTTCGCTTGGACA...AGTCTCCTGTGGCCTAACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp TGCATCTCCATCCAGTCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTTGGAGTGCTTTTCTATaGATGACTTCTGATGTGCCC +
Preference number: 4 (lower is better)
Translates to: CISIQSKCEQHPVPSLKVWSAFL*MTSDVP
Trigger: GGGCACATCAGAAGTCATCCATAGAAAAGCACTCCA...AACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGACTGGATGGAGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp GCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTTCAGCATATATCCTCTaGAGTGCTTTTCTATGGATG +
Preference number: 4 (lower is better)
Translates to: ALLVCASKLHVFACMDFLSAYIL*SAFLWM
Trigger: CATCCATAGAAAAGCACTCCAGAGGATATATGCTGA...AAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp GCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCTTTTAAGGACAATTaGAACAGCAATGGAGGGATT +
Preference number: 4 (lower is better)
Translates to: ALLVCASKLHVFACMDFLPFKDN*NSNGGI
Trigger: AATCCCTCCATTGCTGTTCCAATTGTCCTTAAAAGG...AAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp CTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCTTTTAAGGACAATTaGAACAGCAATGGAGGGATT +
Preference number: 4 (lower is better)
Translates to: LCWCVQANCMSLLAWTSFPFKDN*NSNGGI
Trigger: AATCCCTCCATTGCTGTTCCAATTGTCCTTAAAAGG...GAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp GCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCATGTCCAGGAAAGCTaGGTAATAATCTTCTACATC +
Preference number: 4 (lower is better)
Translates to: ALLVCASKLHVFACMDFLHVQES*VIIFYI
Trigger: GATGTAGAAGATTATTACCCAGCTTTCCTGGACATG...AAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp ATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCCATCTCTCTGTATCACAGGTaGTGGTACAGGGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: IHLSIKSFSSLFCKCISISLYHR*WYRAPG
Trigger: GCCTGGTGCCCTGTACCACCACCTGTGATACAGAGA...GATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp CCTAACTCTATCTATGACTCACTCTATAACCCCAAATCCAAAACCTTTCCTTGTTGCAGTGAGTTGAGATaGCGCCACTGCACTACAGCC +
Preference number: 4 (lower is better)
Translates to: PNSIYDSLYNPKSKTFPCCSELR*RHCTTA
Trigger: GGCTGTAGTGCAGTGGCGCCATCTCAACTCACTGCA...ACAAGGAAAGGTTTTGGATTTGGGGTTATAGAGTGAGTCATAGATAGAGTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR TCA 90 bp CCTAACTCTATCTATGACTCACTCTATAACCCCAAATCCAAAACCTTTCCTTGTCTGAATTCCCGTAGCTaGCTGCATGGTCTCAGACAC +
Preference number: 4 (lower is better)
Translates to: PNSIYDSLYNPKSKTFPCLNSRS*LHGLRH
Trigger: GTGTCTGAGACCATGCAGTCAGCTACGGGAATTCAG...ACAAGGAAAGGTTTTGGATTTGGGGTTATAGAGTGAGTCATAGATAGAGTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR TCA 90 bp CTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCCATCCAGTCAGGGGCAAGAAGGTGTTaGATCCCATTATCAGATCGG +
Preference number: 4 (lower is better)
Translates to: LSIKSFSSLFCKCISIQSGARRC*IPLSDR
Trigger: CCGATCTGATAATGGGATTCAACACCTTCTTGCCCC...TGACTGGATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp AACCTGCTGCTGCATATAATACAGGTTGGGTTTAGAGCTTGGAGCTCAGATGTCATGTCTGGTTGGCCCTaGAATCTGTTCTTGATCTTA +
Preference number: 4 (lower is better)
Translates to: NLLLHIIQVGFRAWSSDVMSGWP*NLFLIL
Trigger: TAAGATCAAGAACAGATTTCAGGGCCAACCAGACAT...GACATCTGAGCTCCAAGCTCTAAACCCAACCTGTATTATATGCAGCAGCAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR TCA 90 bp TGCATCTCCATCCAGTCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTTTCTCAGACCATCAATaGTGTCAGCTGCTTTATCAG +
Preference number: 4 (lower is better)
Translates to: CISIQSKCEQHPVPSLKVFSDHQ*CQLLYQ
Trigger: CTGATAAAGCAGCTGACATCATTGATGGTCTGAGAA...AACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGACTGGATGGAGATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp GTACATCTGTTCATAGGTACTAAATCTGAAGCCACAGTACTATGGTACACAAGATCTTTGAGACGTAGCTaGATGGCAGGGCTGTCACTC +
Preference number: 4 (lower is better)
Translates to: VHLFIGTKSEATVLWYTRSLRRS*MAGLSL
Trigger: GAGTGACAGCCCTGCCATTCAGCTACGTCTCAAAGA...TCTTGTGTACCATAGTACTGTGGCTTCAGATTTAGTACCTATGAACAGATGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360439.8
ENST00000394947.8
CDS-3UTR TCA 90 bp AAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCCCACTTAGGCGAGGTAGTATCTaGATTCATGTATCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: KFQLQLCKVFMFLTGSPLRRGSI*IHVSLH
Trigger: GTGGAGCGATACATGAATTCAGATACTACCTCGCCT...AAGTGGGCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp GTACATCTGTTCATAGGTACTAAATCTGAAGCCACAGTACTATGGTACACAAGACATCCAGTCAAAGTGTaGACAGCATCCGGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: VHLFIGTKSEATVLWYTRHPVKV*TASGSL
Trigger: GAGGGAACCGGATGCTGTTCACACTTTGACTGGATG...TCTTGTGTACCATAGTACTGTGGCTTCAGATTTAGTACCTATGAACAGATGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360439.8
ENST00000394947.8
CDS-3UTR TCA 90 bp CTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCATAAAATCCACAAGATaGTCAATCCCAAAGCCAAAC +
Preference number: 4 (lower is better)
Translates to: LCWCVQANCMSLLAWTSFIKSTR*SIPKPN
Trigger: GTTTGGCTTTGGGATTGATCATCTTGTGGATTTTAT...GAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp AAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCCCACTTCTAAATCAGTACACATaGCCACCGCCAAGTCAGACA +
Preference number: 4 (lower is better)
Translates to: KFQLQLCKVFMFLTGSPLLNQYT*PPPSQT
Trigger: TGTCTGACTTGGCGGTGGTCATGTGTACTGATTTAG...AAGTGGGCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR TCA 90 bp ATACCAAAGAGTCCTGTGAGGAAGGTGGGTAAAAACTGGTGTTGTGCTTTGATACCCAAGAAAAAGAGCTaGATACCACCTTCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: IPKSPVRKVGKNWCCALIPKKKS*IPPSAS
Trigger: AGAGGCTGAAGGTGGTATTCAGCTCTTTTTCTTGGG...TATCAAAGCACAACACCAGTTTTTACCCACCTTCCTCACAGGACTCTTTGGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR TCA 90 bp AAGAATCCACACCAACGAGGGCAGGGATCAAGAAGAACTAAAGTAAGTATCAGGTACCAAAGAGTCCTGTaGGGAAGGTGGGTAAAAACT +
Preference number: 4 (lower is better)
Translates to: KNPHQRGQGSRRTKVSIRYQRVL*GRWVKT
Trigger: AGTTTTTACCCACCTTCCTCACAGGACTCTTTGGTA...CCTGATACTTACTTTAGTTCTTCTTGATCCCTGCCCTCGTTGGTGTGGATTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR GCA 90 bp AGAAATCCTAACTCTATCTATGACTCACTCTATAACCCCAAATCCAAAACCTTTGAGGAAAAGCCTCTGTaGTGCCAGGGATCCGACGCT +
Preference number: 4 (lower is better)
Translates to: RNPNSIYDSLYNPKSKTFEEKPL*CQGSDA
Trigger: AGCGTCGGATCCCTGGCAGCACAGAGGCTTTTCCTC...AAAGGTTTTGGATTTGGGGTTATAGAGTGAGTCATAGATAGAGTTAGGATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR GCA 90 bp GTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCGCTGCTATGAACTGCTaGTATAGCGGGCCCATGACT +
Preference number: 4 (lower is better)
Translates to: VPIHLSIKSFSSLFCKCIAAMNC*YSGPMT
Trigger: AGTCATGGGCCCGCTATAGCAGCAGTTCATAGCAGC...GATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp CCTAACTCTATCTATGACTCACTCTATAACCCCAAATCCAAAACCTTTCCTTGTGCTGCTATGAACTGCTaGTATAGCGGGCCCATGACT +
Preference number: 4 (lower is better)
Translates to: PNSIYDSLYNPKSKTFPCAAMNC*YSGPMT
Trigger: AGTCATGGGCCCGCTATAGCAGCAGTTCATAGCAGC...ACAAGGAAAGGTTTTGGATTTGGGGTTATAGAGTGAGTCATAGATAGAGTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR GCA 90 bp CCTAACTCTATCTATGACTCACTCTATAACCCCAAATCCAAAACCTTTCCTTGTATGGCTGCTATGAACTaGTGCTATAGCGGGCCCATG +
Preference number: 4 (lower is better)
Translates to: PNSIYDSLYNPKSKTFPCMAAMN*CYSGPM
Trigger: CATGGGCCCGCTATAGCAGCAGTTCATAGCAGCCAT...ACAAGGAAAGGTTTTGGATTTGGGGTTATAGAGTGAGTCATAGATAGAGTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR GCA 90 bp AAAATTGTGTGTGTGTGTGCGTGTGTGTGTCAGAGAGTAAAGCTGGTGGATGGCCAAAATCTCCAGGAATaGTTTGTAGATGTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: KIVCVCACVCQRVKLVDGQNLQE*FVDVWL
Trigger: CAACCAGACATCTACAAAGCATTCCTGGAGATTTTG...GCCATCCACCAGCTTTACTCTCTGACACACACACGCACACACACACACAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp ATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCCATCTGGGCATACACCTCCTaGTCTGTCAATGCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: IHLSIKSFSSLFCKCISIWAYTS*SVNAGV
Trigger: CACTCCAGCATTGACAGAGCAGGAGGTGTATGCCCA...GATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp AAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCCCACTTAAAGGAGAGACTAGTTaGACAAGCTCAGCACGAGAG +
Preference number: 4 (lower is better)
Translates to: KFQLQLCKVFMFLTGSPLKGETS*TSSARE
Trigger: CTCTCGTGCTGAGCTTGTGCAACTAGTCTCTCCTTT...AAGTGGGCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp GTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGATCAATGATGTCAGCTaGTTTATCAGCATATATCCT +
Preference number: 4 (lower is better)
Translates to: VCASKLHVFACMDFLPLQINDVS*FISIYP
Trigger: AGGATATATGCTGATAAAGCAGCTGACATCATTGAT...CTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp CTAAAATCTCATCCCACAAAGCTCTTTTTGGCACCCTACACTTTGGCTCACAGTATTGTGCTTCTTAACTaGCCCTGTGGCTTCATCTAC +
Preference number: 4 (lower is better)
Translates to: LKSHPTKLFLAPYTLAHSIVLLN*PCGFIY
Trigger: GTAGATGAAGCCACAGGGGCAGTTAAGAAGCACAAT...ACTGTGAGCCAAAGTGTAGGGTGCCAAAAAGAGCTTTGTGGGATGAGATTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR GCA 90 bp TCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTAGGCCACAGGAGACTTTTTCTTCTTCAATTTaGCGTTCGGCTTGGGAACAA +
Preference number: 4 (lower is better)
Translates to: SKCEQHPVPSLKVRPQETFSSSI*RSAWEQ
Trigger: TTGTTCCCAAGCCGAACGGCAAATTGAAGAAGAAAA...AGTCTCCTGTGGCCTAACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp ACCATGATAGTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTTCTTGTCTCGCTTTATaGCCAGCACTTCCCGTTCCC +
Preference number: 4 (lower is better)
Translates to: TMIVPIHLSIKSFSSLFCSCLAL*PALPVP
Trigger: GGGAACGGGAAGTGCTGGGCATAAAGCGAGACAAGA...ACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAACTATCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp GTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCTTGTCTCGCTTTATaGCCAGCACTTCCCGTTCCC +
Preference number: 4 (lower is better)
Translates to: VPIHLSIKSFSSLFCKCISCLAL*PALPVP
Trigger: GGGAACGGGAAGTGCTGGGCATAAAGCGAGACAAGA...GATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp TGGGAAAAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCTCTGATGTAGACGCTTaGTTACACGCTCATGGGACT +
Preference number: 4 (lower is better)
Translates to: WEKFQLQLCKVFMFLTGSSDVDA*LHAHGT
Trigger: AGTCCCATGAGCGTGTAAGCAAGCGTCTACATCAGA...GCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTTTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp AAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCCCACTTAGCTCTGCTGGTGTGTaGAAGCAAACTGCATGTCTT +
Preference number: 4 (lower is better)
Translates to: KFQLQLCKVFMFLTGSPLSSAGV*KQTACL
Trigger: AAGACATGCAGTTTGCTTGCACACACCAGCAGAGCT...AAGTGGGCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp CTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCAGTCTGTTTTGTAAATaGATCTCCATCCAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: LCWCVQANCMSLLAWTSFSLFCK*ISIQSK
Trigger: CTTTGACTGGATGGAGATGCATTTACAAAACAGACT...GAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp CAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGTTACAACTAAGACTTaGGTAATGGTTGCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: QETPVLALLVCASKLHVFVTTKT*VMVAEE
Trigger: TTCTTCAGCAACCATTACGCAAGTCTTAGTTGTAAC...AAAGACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CCA 90 bp GTTTCTACCCTGGATAAGGAACTGAAGTCAAAATCCCTGCTTCACAGTATTTTCACGACTAATCACTCCTaGGGTGTCGATGCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: VSTLDKELKSKSLLHSIFTTNHS*GVDALR
Trigger: TCTCAGAGCATCGACACCCCAGGAGTGATTAGTCGT...GAAAATACTGTGAAGCAGGGATTTTGACTTCAGTTCCTTATCCAGGGTAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CCA 90 bp TGCATCTCCATCCAGTCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTTGCTTTGTAGATGTCTaGTTGGCCCTGAAATCTGTT +
Preference number: 4 (lower is better)
Translates to: CISIQSKCEQHPVPSLKVCFVDV*LALKSV
Trigger: AACAGATTTCAGGGCCAACCAGACATCTACAAAGCA...AACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGACTGGATGGAGATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp TCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTAGGCCACAGGAGACTCCTTTTAAGGACAATTaGAACAGCAATGGAGGGATT +
Preference number: 4 (lower is better)
Translates to: SKCEQHPVPSLKVRPQETPFKDN*NSNGGI
Trigger: AATCCCTCCATTGCTGTTCCAATTGTCCTTAAAAGG...AGTCTCCTGTGGCCTAACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp CTAAAATCTCATCCCACAAAGCTCTTTTTGGCACCCTACACTTTGGCTCACAGTTTAAAGTTGATCCCCTaGTGGTCCAGAGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: LKSHPTKLFLAPYTLAHSLKLIP*WSRDFK
Trigger: CTTGAAGTCTCTGGACCACCAGGGGATCAACTTTAA...ACTGTGAGCCAAAGTGTAGGGTGCCAAAAAGAGCTTTGTGGGATGAGATTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CCA 90 bp AAAAGGACAACTGATTTGAACTCGTTGAGGTTGAGAACCAGAGGAGAGAAAAGGTGCCTCTTCACATGGTaGATAATCAGAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: KRTTDLNSLRLRTRGEKRCLFTW*IIRAAA
Trigger: TGCTGCTGCTCTGATTATCCACCATGTGAAGAGGCA...CCTTTTCTCTCCTCTGGTTCTCAACCTCAACGAGTTCAAATCAGTTGTCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp AACCTGCTGCTGCATATAATACAGGTTGGGTTTAGAGCTTGGAGCTCAGATGTCCTCAGGCAGAGAATCTaGTGCAGTCGCATAAAAATA +
Preference number: 4 (lower is better)
Translates to: NLLLHIIQVGFRAWSSDVLRQRI*CSRIKI
Trigger: TATTTTTATGCGACTGCACCAGATTCTCTGCCTGAG...GACATCTGAGCTCCAAGCTCTAAACCCAACCTGTATTATATGCAGCAGCAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CCA 90 bp CTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCCATCCAGTCAATTTGCCGTTCGGCTTaGGAACAAATCCGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: LSIKSFSSLFCKCISIQSICRSA*EQIRSS
Trigger: GCTGCTACGGATTTGTTCCCAAGCCGAACGGCAAAT...TGACTGGATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp CAAGTCAGACACTGCCCCAGCTTTGCCCTAAAATCTCATCCCACAAAGCTCTTTCATGTCCAGGAAAGCTaGGTAATAATCTTCTACATC +
Preference number: 4 (lower is better)
Translates to: QVRHCPSFALKSHPTKLFHVQES*VIIFYI
Trigger: GATGTAGAAGATTATTACCCAGCTTTCCTGGACATG...AAAGAGCTTTGTGGGATGAGATTTTAGGGCAAAGCTGGGGCAGTGTCTGACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CCA 90 bp AAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCCCACTTTCCGCCGTAGATTCCTaGGGAGAAATACTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: KFQLQLCKVFMFLTGSPLSAVDS*GEILVS
Trigger: AGAAACCAGTATTTCTCCCCAGGAATCTACGGCGGA...AAGTGGGCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp ACCATGATAGTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTGGTGTTACAGAGTACTaGATTCCCGTAGCTGACTGC +
Preference number: 4 (lower is better)
Translates to: TMIVPIHLSIKSFSSLFCGVTEY*IPVADC
Trigger: GCAGTCAGCTACGGGAATTCAGTACTCTGTAACACC...ACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAACTATCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp ATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCCATCTCAGTTGGGGCTTCTTaGCAGTGCCTCCATGATCAT +
Preference number: 4 (lower is better)
Translates to: IHLSIKSFSSLFCKCISISVGAS*QCLHDH
Trigger: ATGATCATGGAGGCACTGTCAAGAAGCCCCAACTGA...GATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp TGCATCTCCATCCAGTCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTTGTAGGAATTCAGCTTaGATCTACACTCCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: CISIQSKCEQHPVPSLKVCRNSA*IYTPAY
Trigger: ATAAGCTGGAGTGTAGATTCAAGCTGAATTCCTACA...AACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGACTGGATGGAGATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp GTACATCTGTTCATAGGTACTAAATCTGAAGCCACAGTACTATGGTACACAAGAAGGCCCAGTGAGGCTTaGAAGGCATCTTCCTTGTTT +
Preference number: 4 (lower is better)
Translates to: VHLFIGTKSEATVLWYTRRPSEA*KASSLF
Trigger: AAACAAGGAAGATGCCTTTCAAGCCTCACTGGGCCT...TCTTGTGTACCATAGTACTGTGGCTTCAGATTTAGTACCTATGAACAGATGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360439.8
ENST00000394947.8
CDS-3UTR TCA 90 bp ATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCCATCAGGCCCAGTGAGGCTTaGAAGGCATCTTCCTTGTTT +
Preference number: 4 (lower is better)
Translates to: IHLSIKSFSSLFCKCISIRPSEA*KASSLF
Trigger: AAACAAGGAAGATGCCTTTCAAGCCTCACTGGGCCT...GATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp TCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTAGGCCACAGGAGACTATAAAATCCACAAGATaGTCAATCCCAAAGCCAAAC +
Preference number: 4 (lower is better)
Translates to: SKCEQHPVPSLKVRPQETIKSTR*SIPKPN
Trigger: GTTTGGCTTTGGGATTGATCATCTTGTGGATTTTAT...AGTCTCCTGTGGCCTAACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp CTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCCATCCAGTCAGTTGGGACTTTCTCCTaGACTGGCCTTGAAATCCTA +
Preference number: 4 (lower is better)
Translates to: LSIKSFSSLFCKCISIQSVGTFS*TGLEIL
Trigger: TAGGATTTCAAGGCCAGTTCAGGAGAAAGTCCCAAC...TGACTGGATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR GCA 90 bp AAGAATCCACACCAACGAGGGCAGGGATCAAGAAGAACTAAAGTAAGTATCAGGTTCATTCTGTGCTCATaGTCAGGGATGCACTACAAA +
Preference number: 4 (lower is better)
Translates to: KNPHQRGQGSRRTKVSIRFILCS*SGMHYK
Trigger: TTTGTAGTGCATCCCTGAGCATGAGCACAGAATGAA...CCTGATACTTACTTTAGTTCTTCTTGATCCCTGCCCTCGTTGGTGTGGATTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR GCA 90 bp AGCAAACATAAAACACACAGAACATTGCTGGTTACAACTAAGACTTGCGTAATGCATGGTCTCAGACACTaGTTCATACACAGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SKHKTHRTLLVTTKTCVMHGLRH*FIHRRG
Trigger: GCCCCTCCTGTGTATGAAGCAGTGTCTGAGACCATG...CATTACGCAAGTCTTAGTTGTAACCAGCAATGTTCTGTGTGTTTTATGTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR GCA 90 bp AACCTGCTGCTGCATATAATACAGGTTGGGTTTAGAGCTTGGAGCTCAGATGTCCAAAATCTCCAGGAATaGTTTGTAGATGTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: NLLLHIIQVGFRAWSSDVQNLQE*FVDVWL
Trigger: CAACCAGACATCTACAAAGCATTCCTGGAGATTTTG...GACATCTGAGCTCCAAGCTCTAAACCCAACCTGTATTATATGCAGCAGCAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR GCA 90 bp AAAAGGACAACTGATTTGAACTCGTTGAGGTTGAGAACCAGAGGAGAGAAAAGGATTTCACGGGGCACATaGTCCTTGGTCCATTTATCT +
Preference number: 4 (lower is better)
Translates to: KRTTDLNSLRLRTRGEKRISRGT*SLVHLS
Trigger: AGATAAATGGACCAAGGAGCATGTGCCCCGTGAAAT...CCTTTTCTCTCCTCTGGTTCTCAACCTCAACGAGTTCAAATCAGTTGTCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp TGCATCTCCATCCAGTCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTTTAATGCTCACAAAATaGAGGGTCTCTGTATCACAG +
Preference number: 4 (lower is better)
Translates to: CISIQSKCEQHPVPSLKVLMLTK*RVSVSQ
Trigger: CTGTGATACAGAGACCCTGCATTTTGTGAGCATTAA...AACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGACTGGATGGAGATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp AAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCCCACTTTGTGTGCAAGCAAACTaGATGTCTTTGCTTGCATGG +
Preference number: 4 (lower is better)
Translates to: KFQLQLCKVFMFLTGSPLCVQAN*MSLLAW
Trigger: CCATGCAAGCAAAGACATGCAGTTTGCTTGCACACA...AAGTGGGCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp CTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCCATCCAGTCAAGCTCTGCTGGTGTGTaGAAGCAAACTGCATGTCTT +
Preference number: 4 (lower is better)
Translates to: LSIKSFSSLFCKCISIQSSSAGV*KQTACL
Trigger: AAGACATGCAGTTTGCTTGCACACACCAGCAGAGCT...TGACTGGATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp AAAAGGACAACTGATTTGAACTCGTTGAGGTTGAGAACCAGAGGAGAGAAAAGGATCCCAAAGCCAAACTaGAGGTCCCAGATAAAACCT +
Preference number: 4 (lower is better)
Translates to: KRTTDLNSLRLRTRGEKRIPKPN*RSQIKP
Trigger: AGGTTTTATCTGGGACCTGCAGTTTGGCTTTGGGAT...CCTTTTCTCTCCTCTGGTTCTCAACCTCAACGAGTTCAAATCAGTTGTCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp CAATTTACTGTACTAACCTGTAGCCAATCATATATGTGCTCAATAGAGAGTTCATGCAACTGGTGGGGCTaGATGAGCATGACTCTGGAC +
Preference number: 4 (lower is better)
Translates to: QFTVLTCSQSYMCSIESSCNWWG*MSMTLD
Trigger: GTCCAGAGTCATGCTCATCCAGCCCCACCAGTTGCA...TGAACTCTCTATTGAGCACATATATGATTGGCTACAGGTTAGTACAGTAAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR CCA 90 bp ATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCCATCATTGTTCTGCAAGGATaGGGCCGTTCCCAACGAGAT +
Preference number: 4 (lower is better)
Translates to: IHLSIKSFSSLFCKCISIIVLQG*GRSQRD
Trigger: ATCTCGTTGGGAACGGCCCCATCCTTGCAGAACAAT...GATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp ACCATGATAGTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTATTGTTCTGCAAGGATaGGGCCGTTCCCAACGAGAT +
Preference number: 4 (lower is better)
Translates to: TMIVPIHLSIKSFSSLFCIVLQG*GRSQRD
Trigger: ATCTCGTTGGGAACGGCCCCATCCTTGCAGAACAAT...ACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAACTATCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp ATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCCATCGGCTTGTTGTTCAGTTaGGGCTTCTTGACAGTGCCT +
Preference number: 4 (lower is better)
Translates to: IHLSIKSFSSLFCKCISIGLLFS*GFLTVP
Trigger: AGGCACTGTCAAGAAGCCCCAACTGAACAACAAGCC...GATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp ATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCCATCGGGTTTCTTCTTAACTaGAGGGGTGGTTCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: IHLSIKSFSSLFCKCISIGFLLN*RGGSCR
Trigger: CCTACAGGAACCACCCCTCCAGTTAAGAAGAAACCC...GATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp GTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCGGGTTTCTTCTTAACTaGAGGGGTGGTTCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: VPIHLSIKSFSSLFCKCIGFLLN*RGGSCR
Trigger: CCTACAGGAACCACCCCTCCAGTTAAGAAGAAACCC...GATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp AAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCCCACTTTGTGGCTCGCTCCTTTaGATAAGTTTCCAGATGTAC +
Preference number: 4 (lower is better)
Translates to: KFQLQLCKVFMFLTGSPLCGSLL*ISFQMY
Trigger: GTACATCTGGAAACTTATCCAAAGGAGCGAGCCACA...AAGTGGGCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp GTACATCTGTTCATAGGTACTAAATCTGAAGCCACAGTACTATGGTACACAAGATCCGTCCTGTACACTTaGGCTGCTGGTAACTCTTTG +
Preference number: 4 (lower is better)
Translates to: VHLFIGTKSEATVLWYTRSVLYT*AAGNSL
Trigger: CAAAGAGTTACCAGCAGCCCAAGTGTACAGGACGGA...TCTTGTGTACCATAGTACTGTGGCTTCAGATTTAGTACCTATGAACAGATGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360439.8
ENST00000394947.8
CDS-3UTR CCA 90 bp ACCATGATAGTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTTCCGTCCTGTACACTTaGGCTGCTGGTAACTCTTTG +
Preference number: 4 (lower is better)
Translates to: TMIVPIHLSIKSFSSLFCSVLYT*AAGNSL
Trigger: CAAAGAGTTACCAGCAGCCCAAGTGTACAGGACGGA...ACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAACTATCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp CAGGCTGTAGGTAAAACTTACTCTTTTGTTGGTTGCACTGGTGGGTTGGGACTTTCAGCATATATCCTCTaGAGTGCTTTTCTATGGATG +
Preference number: 4 (lower is better)
Translates to: QAVGKTYSFVGCTGGLGLSAYIL*SAFLWM
Trigger: CATCCATAGAAAAGCACTCCAGAGGATATATGCTGA...AAGTCCCAACCCACCAGTGCAACCAACAAAAGAGTAAGTTTTACCTACAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CCA 90 bp AAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCCCACTTGAGAGATCACCTCTTTaGGCAAAGAGCAAATCTGGA +
Preference number: 4 (lower is better)
Translates to: KFQLQLCKVFMFLTGSPLERSPL*AKSKSG
Trigger: TCCAGATTTGCTCTTTGCCCAAAGAGGTGATCTCTC...AAGTGGGCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
3UTR CAA 72 bp AAAACAGTTCCACGGGAGCTAAAAAGGACAACTGATTaGAACTCGTTGAGGTTGAGAACCAGAGGAGAGAAA +
Preference number: 4 (lower is better)
Translates to: KTVPRELKRTTD*NSLRLRTRGEK
Trigger: TTTCTCTCCTCTGGTTCTCAACCTCAACGAGTTCAAATCAGTTGTCCTTTTTAGCTCCCGTGGAACTGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp CTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCCATCCAGTCATTAAACTCCACAGGTTaGTTGTTCTGCAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: LSIKSFSSLFCKCISIQSLNSTG*LFCKDG
Trigger: CCCATCCTTGCAGAACAATCAACCTGTGGAGTTTAA...TGACTGGATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp TGGGAAAAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCTTGACAGTGCCTCCATaGTCATTTCTCACAGAATCA +
Preference number: 4 (lower is better)
Translates to: WEKFQLQLCKVFMFLTGSLTVPP*SFLTES
Trigger: TGATTCTGTGAGAAATGATCATGGAGGCACTGTCAA...GCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTTTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp AAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCCCACTTTTGACAGTGCCTCCATaGTCATTTCTCACAGAATCA +
Preference number: 4 (lower is better)
Translates to: KFQLQLCKVFMFLTGSPLLTVPP*SFLTES
Trigger: TGATTCTGTGAGAAATGATCATGGAGGCACTGTCAA...AAGTGGGCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp AAAAGGACAACTGATTTGAACTCGTTGAGGTTGAGAACCAGAGGAGAGAAAAGGTTGACAGTGCCTCCATaGTCATTTCTCACAGAATCA +
Preference number: 4 (lower is better)
Translates to: KRTTDLNSLRLRTRGEKRLTVPP*SFLTES
Trigger: TGATTCTGTGAGAAATGATCATGGAGGCACTGTCAA...CCTTTTCTCTCCTCTGGTTCTCAACCTCAACGAGTTCAAATCAGTTGTCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp GTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTTGTTAAAGCCTCTCTaGGCTTCTCGCCATTCTTCC +
Preference number: 4 (lower is better)
Translates to: VPIHLSIKSFSSLFCKCILLKPL*ASRHSS
Trigger: GGAAGAATGGCGAGAAGCTCAGAGAGGCTTTAACAA...GATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp ATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCCATCTATTTGTCCTCCTTCTaGATGCCTGTCTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: IHLSIKSFSSLFCKCISIYLSSF*MPVCLF
Trigger: GAAGAGGCAGACAGGCATTCAGAAGGAGGACAAATA...GATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp AAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCCCACTTTGTAGGCATGAATGGTaGACATCTCTCTCAGTGAAT +
Preference number: 4 (lower is better)
Translates to: KFQLQLCKVFMFLTGSPLCRHEW*TSLSVN
Trigger: ATTCACTGAGAGAGATGTTCACCATTCATGCCTACA...AAGTGGGCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp GTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTATGCTGCAGCTGTCTaGCAATGCTCTGGATCAGTT +
Preference number: 4 (lower is better)
Translates to: VPIHLSIKSFSSLFCKCIYAAAV*QCSGSV
Trigger: AACTGATCCAGAGCATTGTCAGACAGCTGCAGCATA...GATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp AAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCCCACTTAAGCTTCTTCTGTATTaGTTCCAGAACCCGGATTGT +
Preference number: 4 (lower is better)
Translates to: KFQLQLCKVFMFLTGSPLKLLLY*FQNPDC
Trigger: ACAATCCGGGTTCTGGAAGCAATACAGAAGAAGCTT...AAGTGGGCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp AAAATTGTGTGTGTGTGTGCGTGTGTGTGTCAGAGAGTAAAGCTGGTGGATGGCATCAATGATGTCAGCTaGTTTATCAGCATATATCCT +
Preference number: 4 (lower is better)
Translates to: KIVCVCACVCQRVKLVDGINDVS*FISIYP
Trigger: AGGATATATGCTGATAAAGCAGCTGACATCATTGAT...GCCATCCACCAGCTTTACTCTCTGACACACACACGCACACACACACACAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp GTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCTGATGTAGACGCTTaGTTACACGCTCATGGGACT +
Preference number: 4 (lower is better)
Translates to: VPIHLSIKSFSSLFCKCISDVDA*LHAHGT
Trigger: AGTCCCATGAGCGTGTAAGCAAGCGTCTACATCAGA...GATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp GACAAGGGACGTGGGTTGAGAGTTTATTCCTTAAGTAAGAACCAAGCTTTATTTATTATCAGATCGGGGTaGCCTTTGAATAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: DKGRGLRVYSLSKNQALFIIRSG*PLNSWD
Trigger: GTCCCAGCTATTCAAAGGCCACCCCGATCTGATAAT...AAATAAAGCTTGGTTCTTACTTAAGGAATAAACTCTCAACCCACGTCCCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CCA 90 bp GTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCAAAGCACGGAGCTGTTaGCATCTGGTAGGAATTGTC +
Preference number: 4 (lower is better)
Translates to: VPIHLSIKSFSSLFCKCIKARSC*HLVGIV
Trigger: GACAATTCCTACCAGATGCCAACAGCTCCGTGCTTT...GATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp TGGGAAAAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCTGTCTGACAATGCTCTaGATCAGTTTGTCCATGGTA +
Preference number: 4 (lower is better)
Translates to: WEKFQLQLCKVFMFLTGSCLTML*ISLSMV
Trigger: TACCATGGACAAACTGATCCAGAGCATTGTCAGACA...GCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTTTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp GACAAGGGACGTGGGTTGAGAGTTTATTCCTTAAGTAAGAACCAAGCTTTATTTCACCAATTTCCCCTATaGTTCCAGGTCAACATGACC +
Preference number: 4 (lower is better)
Translates to: DKGRGLRVYSLSKNQALFHQFPL*FQVNMT
Trigger: GGTCATGTTGACCTGGAACCATAGGGGAAATTGGTG...AAATAAAGCTTGGTTCTTACTTAAGGAATAAACTCTCAACCCACGTCCCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CCA 90 bp CCTAACTCTATCTATGACTCACTCTATAACCCCAAATCCAAAACCTTTCCTTGTTTTCGAAGGCCAAGATaGGAGAATCACTTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: PNSIYDSLYNPKSKTFPCFRRPR*ENHLRP
Trigger: TGGCCTCAAGTGATTCTCCCATCTTGGCCTTCGAAA...ACAAGGAAAGGTTTTGGATTTGGGGTTATAGAGTGAGTCATAGATAGAGTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR CCA 90 bp ATACCAAAGAGTCCTGTGAGGAAGGTGGGTAAAAACTGGTGTTGTGCTTTGATAAAGGTGGGTAAAAACTaGTGTTGTGCTTTGATAGGG +
Preference number: 4 (lower is better)
Translates to: IPKSPVRKVGKNWCCALIKVGKN*CCALIG
Trigger: CCCTATCAAAGCACAACACCAGTTTTTACCCACCTT...TATCAAAGCACAACACCAGTTTTTACCCACCTTCCTCACAGGACTCTTTGGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR CCA 90 bp CCTAACTCTATCTATGACTCACTCTATAACCCCAAATCCAAAACCTTTCCTTGTAGTTTGAGAGCAGCCTaGCTAACATGGAAAAACCCC +
Preference number: 4 (lower is better)
Translates to: PNSIYDSLYNPKSKTFPCSLRAA*LTWKNP
Trigger: GGGGTTTTTCCATGTTAGCCAGGCTGCTCTCAAACT...ACAAGGAAAGGTTTTGGATTTGGGGTTATAGAGTGAGTCATAGATAGAGTTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR TCA 90 bp GTACATCTGTTCATAGGTACTAAATCTGAAGCCACAGTACTATGGTACACAAGATTAAACTCCACAGGTTaGTTGTTCTGCAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: VHLFIGTKSEATVLWYTRLNSTG*LFCKDG
Trigger: CCCATCCTTGCAGAACAATCAACCTGTGGAGTTTAA...TCTTGTGTACCATAGTACTGTGGCTTCAGATTTAGTACCTATGAACAGATGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360439.8
ENST00000394947.8
CDS-3UTR TCA 90 bp AAAAGGACAACTGATTTGAACTCGTTGAGGTTGAGAACCAGAGGAGAGAAAAGGGAATTGTCCAAACTCTaGCAACAAATCTTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: KRTTDLNSLRLRTRGEKRELSKL*QQIFLV
Trigger: AACCAGGAAGATTTGTTGTCAGAGTTTGGACAATTC...CCTTTTCTCTCCTCTGGTTCTCAACCTCAACGAGTTCAAATCAGTTGTCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp TTTGCCCTAAAATCTCATCCCACAAAGCTCTTTTTGGCACCCTACACTTTGGCTTATAGTCCTCTGATTTaGTCACATACACCATCTTGT +
Preference number: 4 (lower is better)
Translates to: FALKSHPTKLFLAPYTLAYSPLI*SHTPSC
Trigger: ACAAGATGGTGTATGTGATCAAATCAGAGGACTATA...AGCCAAAGTGTAGGGTGCCAAAAAGAGCTTTGTGGGATGAGATTTTAGGGCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR TCA 90 bp AAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCCCACTTGTCTACCATGTGTTTTaGAAATCCAGGAGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: KFQLQLCKVFMFLTGSPLVYHVF*KSRSQK
Trigger: TTTTTGGCTCCTGGATTTTCAAAACACATGGTAGAC...AAGTGGGCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR GCA 90 bp AGAAATCCTAACTCTATCTATGACTCACTCTATAACCCCAAATCCAAAACCTTTATTCCCGTAGCTGACTaGATGGTCTCAGACACTGCT +
Preference number: 4 (lower is better)
Translates to: RNPNSIYDSLYNPKSKTFIPVAD*MVSDTA
Trigger: AGCAGTGTCTGAGACCATGCAGTCAGCTACGGGAAT...AAAGGTTTTGGATTTGGGGTTATAGAGTGAGTCATAGATAGAGTTAGGATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR GCA 90 bp AAAAGGACAACTGATTTGAACTCGTTGAGGTTGAGAACCAGAGGAGAGAAAAGGCAAAATCTCCAGGAATaGTTTGTAGATGTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: KRTTDLNSLRLRTRGEKRQNLQE*FVDVWL
Trigger: CAACCAGACATCTACAAAGCATTCCTGGAGATTTTG...CCTTTTCTCTCCTCTGGTTCTCAACCTCAACGAGTTCAAATCAGTTGTCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp ATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCCATCATTGTGCTTCTTAACTaGCCCTGTGGCTTCATCTAC +
Preference number: 4 (lower is better)
Translates to: IHLSIKSFSSLFCKCISIIVLLN*PCGFIY
Trigger: GTAGATGAAGCCACAGGGGCAGTTAAGAAGCACAAT...GATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp AAAAGGACAACTGATTTGAACTCGTTGAGGTTGAGAACCAGAGGAGAGAAAAGGAGGCAGAGAATCTGGTaGAGTCGCATAAAAATATAC +
Preference number: 4 (lower is better)
Translates to: KRTTDLNSLRLRTRGEKRRQRIW*SRIKIY
Trigger: GTATATTTTTATGCGACTGCACCAGATTCTCTGCCT...CCTTTTCTCTCCTCTGGTTCTCAACCTCAACGAGTTCAAATCAGTTGTCCTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp ACCATGATAGTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTATTTCACGGGGCACATaGTCCTTGGTCCATTTATCT +
Preference number: 4 (lower is better)
Translates to: TMIVPIHLSIKSFSSLFCISRGT*SLVHLS
Trigger: AGATAAATGGACCAAGGAGCATGTGCCCCGTGAAAT...ACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAACTATCATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp TGGGAAAAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCTTAATGCTCACAAAATaGAGGGTCTCTGTATCACAG +
Preference number: 4 (lower is better)
Translates to: WEKFQLQLCKVFMFLTGSLMLTK*RVSVSQ
Trigger: CTGTGATACAGAGACCCTGCATTTTGTGAGCATTAA...GCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTTTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp GTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCATCCCAAAGCCAAACTaGAGGTCCCAGATAAAACCT +
Preference number: 4 (lower is better)
Translates to: VPIHLSIKSFSSLFCKCIIPKPN*RSQIKP
Trigger: AGGTTTTATCTGGGACCTGCAGTTTGGCTTTGGGAT...GATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp CCTAACTCTATCTATGACTCACTCTATAACCCCAAATCCAAAACCTTTCCTTGTCCACAACCAACAAGCTaGAACCAGTATTTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: PNSIYDSLYNPKSKTFPCPQPTS*NQYFLL
Trigger: TAGCAGGAAATACTGGTTGCAGCTTGTTGGTTGTGG...ACAAGGAAAGGTTTTGGATTTGGGGTTATAGAGTGAGTCATAGATAGAGTTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR CCA 90 bp ATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCCATCTGGCCTTTGAATAGCTaGGACACACGACTAATCACT +
Preference number: 4 (lower is better)
Translates to: IHLSIKSFSSLFCKCISIWPLNS*DTRLIT
Trigger: AGTGATTAGTCGTGTGTCCCAGCTATTCAAAGGCCA...GATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp GTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTTCCTCCAGCTTCCTTaGCATTTCTCTGCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: VPIHLSIKSFSSLFCKCIFLQLP*HFSALS
Trigger: AGAAAGAGCAGAGAAATGCCAAGGAAGCTGGAGGAA...GATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp GTACATCTGTTCATAGGTACTAAATCTGAAGCCACAGTACTATGGTACACAAGATGGAGTGCTTTTCTATaGATGACTTCTGATGTGCCC +
Preference number: 4 (lower is better)
Translates to: VHLFIGTKSEATVLWYTRWSAFL*MTSDVP
Trigger: GGGCACATCAGAAGTCATCCATAGAAAAGCACTCCA...TCTTGTGTACCATAGTACTGTGGCTTCAGATTTAGTACCTATGAACAGATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360439.8
ENST00000394947.8
CDS-3UTR CCA 90 bp ATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCCATCTGGAGTGCTTTTCTATaGATGACTTCTGATGTGCCC +
Preference number: 4 (lower is better)
Translates to: IHLSIKSFSSLFCKCISIWSAFL*MTSDVP
Trigger: GGGCACATCAGAAGTCATCCATAGAAAAGCACTCCA...GATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp AAAAGGACAACTGATTTGAACTCGTTGAGGTTGAGAACCAGAGGAGAGAAAAGGTCAGCATATATCCTCTaGAGTGCTTTTCTATGGATG +
Preference number: 4 (lower is better)
Translates to: KRTTDLNSLRLRTRGEKRSAYIL*SAFLWM
Trigger: CATCCATAGAAAAGCACTCCAGAGGATATATGCTGA...CCTTTTCTCTCCTCTGGTTCTCAACCTCAACGAGTTCAAATCAGTTGTCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp AGAAATCCTAACTCTATCTATGACTCACTCTATAACCCCAAATCCAAAACCTTTAGCCTCCTGAGTAGCTaGGATTATTACAGGCATGCG +
Preference number: 4 (lower is better)
Translates to: RNPNSIYDSLYNPKSKTFSLLSS*DYYRHA
Trigger: CGCATGCCTGTAATAATCCCAGCTACTCAGGAGGCT...AAAGGTTTTGGATTTGGGGTTATAGAGTGAGTCATAGATAGAGTTAGGATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR TCA 90 bp ATACCAAAGAGTCCTGTGAGGAAGGTGGGTAAAAACTGGTGTTGTGCTTTGATAATGGACTTGATGATGTaGGTCAATTCAGCTATTCAT +
Preference number: 4 (lower is better)
Translates to: IPKSPVRKVGKNWCCALIMDLMM*VNSAIH
Trigger: ATGAATAGCTGAATTGACTCACATCATCAAGTCCAT...TATCAAAGCACAACACCAGTTTTTACCCACCTTCCTCACAGGACTCTTTGGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR TCA 90 bp ATACCAAAGAGTCCTGTGAGGAAGGTGGGTAAAAACTGGTGTTGTGCTTTGATAATAGTCAAGAGCTTGTaGCTAAAAGAACACAACAAG +
Preference number: 4 (lower is better)
Translates to: IPKSPVRKVGKNWCCALIIVKSL*LKEHNK
Trigger: CTTGTTGTGTTCTTTTAGTCACAAGCTCTTGACTAT...TATCAAAGCACAACACCAGTTTTTACCCACCTTCCTCACAGGACTCTTTGGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR GCA 90 bp ATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCCATCTCTCAGCAGTTGTTTTaGTTAAAAGCACGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: IHLSIKSFSSLFCKCISISQQLF*LKARSC
Trigger: ACAGCTCCGTGCTTTTAAGCAAAACAACTGCTGAGA...GATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp TGGGAAAAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCATATATCCTCTGGAGTaGTTTTCTATGGATGACTTC +
Preference number: 4 (lower is better)
Translates to: WEKFQLQLCKVFMFLTGSIYPLE*FSMDDF
Trigger: GAAGTCATCCATAGAAAAGCACTCCAGAGGATATAT...GCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTTTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp AGCAAACATAAAACACACAGAACATTGCTGGTTACAACTAAGACTTGCGTAATGATCCCAAAGCCAAACTaGAGGTCCCAGATAAAACCT +
Preference number: 4 (lower is better)
Translates to: SKHKTHRTLLVTTKTCVMIPKPN*RSQIKP
Trigger: AGGTTTTATCTGGGACCTGCAGTTTGGCTTTGGGAT...CATTACGCAAGTCTTAGTTGTAACCAGCAATGTTCTGTGTGTTTTATGTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR GCA 90 bp CCTAACTCTATCTATGACTCACTCTATAACCCCAAATCCAAAACCTTTCCTTGTTCACTTCTCCAGGGATaGCTCATGAATTTCAAAGCA +
Preference number: 4 (lower is better)
Translates to: PNSIYDSLYNPKSKTFPCSLLQG*LMNFKA
Trigger: TGCTTTGAAATTCATGAGGCATCCCTGGAGAAGTGA...ACAAGGAAAGGTTTTGGATTTGGGGTTATAGAGTGAGTCATAGATAGAGTTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR GCA 90 bp AGAAATCCTAACTCTATCTATGACTCACTCTATAACCCCAAATCCAAAACCTTTAGGCATGCGCCACCATaGCTGGCTCATTTTGTATTT +
Preference number: 4 (lower is better)
Translates to: RNPNSIYDSLYNPKSKTFRHAPP*LAHFVF
Trigger: AAATACAAAATGAGCCAGGCATGGTGGCGCATGCCT...AAAGGTTTTGGATTTGGGGTTATAGAGTGAGTCATAGATAGAGTTAGGATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR CCA 90 bp ATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCCATCCTCAGGCAGAGAATCTaGTGCAGTCGCATAAAAATA +
Preference number: 4 (lower is better)
Translates to: IHLSIKSFSSLFCKCISILRQRI*CSRIKI
Trigger: TATTTTTATGCGACTGCACCAGATTCTCTGCCTGAG...GATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp ACCATGATAGTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTTGTCTGACAATGCTCTaGATCAGTTTGTCCATGGTA +
Preference number: 4 (lower is better)
Translates to: TMIVPIHLSIKSFSSLFCCLTML*ISLSMV
Trigger: TACCATGGACAAACTGATCCAGAGCATTGTCAGACA...ACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAACTATCATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp AGCAAACATAAAACACACAGAACATTGCTGGTTACAACTAAGACTTGCGTAATGAACTTACTCTTTTGTTaGTTGCACTGGTGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: SKHKTHRTLLVTTKTCVMNLLFC*LHWWVG
Trigger: CCCAACCCACCAGTGCAACCAACAAAAGAGTAAGTT...CATTACGCAAGTCTTAGTTGTAACCAGCAATGTTCTGTGTGTTTTATGTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CCA 90 bp AAGAATCCACACCAACGAGGGCAGGGATCAAGAAGAACTAAAGTAAGTATCAGGTTTTTAGTAGAGGCATaGTTTCATCACATTTGTCAG +
Preference number: 4 (lower is better)
Translates to: KNPHQRGQGSRRTKVSIRFLVEA*FHHICQ
Trigger: CTGACAAATGTGATGAAACCATGCCTCTACTAAAAA...CCTGATACTTACTTTAGTTCTTCTTGATCCCTGCCCTCGTTGGTGTGGATTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567289.5
3UTR CAA 72 bp CCTGTGAGGAAGGTGGGTAAAAACTGGTGTTGTGCTTaGATAGGGTTGATTGAAAAAGGCTATAGAAATACA +
Preference number: 4 (lower is better)
Translates to: PVRKVGKNWCCA*IGLIEKGYRNT
Trigger: TGTATTTCTATAGCCTTTTTCAATCAACCCTATCAAAGCACAACACCAGTTTTTACCCACCTTCCTCACAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR TCA 90 bp GTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCGAATTGTCCAAACTCTaGCAACAAATCTTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: VPIHLSIKSFSSLFCKCIELSKL*QQIFLV
Trigger: AACCAGGAAGATTTGTTGTCAGAGTTTGGACAATTC...GATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp ACCATGATAGTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTGAATTGTCCAAACTCTaGCAACAAATCTTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: TMIVPIHLSIKSFSSLFCELSKL*QQIFLV
Trigger: AACCAGGAAGATTTGTTGTCAGAGTTTGGACAATTC...ACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAACTATCATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp GTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTGTAGGAATTCAGCTTaGATCTACACTCCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: VPIHLSIKSFSSLFCKCICRNSA*IYTPAY
Trigger: ATAAGCTGGAGTGTAGATTCAAGCTGAATTCCTACA...GATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CCA 90 bp ACCATGATAGTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTCATGTCCAGGAAAGCTaGGTAATAATCTTCTACATC +
Preference number: 4 (lower is better)
Translates to: TMIVPIHLSIKSFSSLFCHVQES*VIIFYI
Trigger: GATGTAGAAGATTATTACCCAGCTTTCCTGGACATG...ACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAACTATCATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp ACCATGATAGTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTTATAGTCCTCTGATTTaGTCACATACACCATCTTGT +
Preference number: 4 (lower is better)
Translates to: TMIVPIHLSIKSFSSLFCYSPLI*SHTPSC
Trigger: ACAAGATGGTGTATGTGATCAAATCAGAGGACTATA...ACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAACTATCATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp ACCATGATAGTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTATAAAATCCACAAGATaGTCAATCCCAAAGCCAAAC +
Preference number: 4 (lower is better)
Translates to: TMIVPIHLSIKSFSSLFCIKSTR*SIPKPN
Trigger: GTTTGGCTTTGGGATTGATCATCTTGTGGATTTTAT...ACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAACTATCATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp AGCAAACATAAAACACACAGAACATTGCTGGTTACAACTAAGACTTGCGTAATGGCTAAAAAGGACAACTaGTTTGAACTCGTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: SKHKTHRTLLVTTKTCVMAKKDN*FELVEV
Trigger: AACCTCAACGAGTTCAAATCAGTTGTCCTTTTTAGC...CATTACGCAAGTCTTAGTTGTAACCAGCAATGTTCTGTGTGTTTTATGTTTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR TCA 90 bp CCTAACTCTATCTATGACTCACTCTATAACCCCAAATCCAAAACCTTTCCTTGTCAGTCCACAAACATTTaGGTATATTCTTCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: PNSIYDSLYNPKSKTFPCQSTNI*VYSSLD
Trigger: ATCCAGAGAAGAATATACTCAAATGTTTGTGGACTG...ACAAGGAAAGGTTTTGGATTTGGGGTTATAGAGTGAGTCATAGATAGAGTTAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR TCA 90 bp AGAAATCCTAACTCTATCTATGACTCACTCTATAACCCCAAATCCAAAACCTTTAGACTGATCCAAAAATaGCAGGCAATGTGGGAATAC +
Preference number: 4 (lower is better)
Translates to: RNPNSIYDSLYNPKSKTFRLIQK*QAMWEY
Trigger: GTATTCCCACATTGCCTGTCATTTTTGGATCAGTCT...AAAGGTTTTGGATTTGGGGTTATAGAGTGAGTCATAGATAGAGTTAGGATTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR GCA 90 bp GTACATCTGTTCATAGGTACTAAATCTGAAGCCACAGTACTATGGTACACAAGAATATATCCTCTGGAGTaGTTTTCTATGGATGACTTC +
Preference number: 4 (lower is better)
Translates to: VHLFIGTKSEATVLWYTRIYPLE*FSMDDF
Trigger: GAAGTCATCCATAGAAAAGCACTCCAGAGGATATAT...TCTTGTGTACCATAGTACTGTGGCTTCAGATTTAGTACCTATGAACAGATGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360439.8
ENST00000394947.8
CDS-3UTR GCA 90 bp ACCATGATAGTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAGTCTGTTTTGTAAATaGATCTCCATCCAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: TMIVPIHLSIKSFSSLFCSLFCK*ISIQSK
Trigger: CTTTGACTGGATGGAGATGCATTTACAAAACAGACT...ACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAACTATCATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR GCA 90 bp GACAAGGGACGTGGGTTGAGAGTTTATTCCTTAAGTAAGAACCAAGCTTTATTTAGTCTGTTTTGTAAATaGATCTCCATCCAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: DKGRGLRVYSLSKNQALFSLFCK*ISIQSK
Trigger: CTTTGACTGGATGGAGATGCATTTACAAAACAGACT...AAATAAAGCTTGGTTCTTACTTAAGGAATAAACTCTCAACCCACGTCCCTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CCA 90 bp GTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCGGATTGTTGCCAGATTaGTCTCTAAAACTACATCAA +
Preference number: 4 (lower is better)
Translates to: VPIHLSIKSFSSLFCKCIGLLPD*SLKLHQ
Trigger: TTGATGTAGTTTTAGAGACCAATCTGGCAACAATCC...GATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR TCA 90 bp AGAAATCCTAACTCTATCTATGACTCACTCTATAACCCCAAATCCAAAACCTTTGCAATGTGGGAATACTaGGTTAAATTACATGGAGGT +
Preference number: 4 (lower is better)
Translates to: RNPNSIYDSLYNPKSKTFAMWEY*VKLHGG
Trigger: ACCTCCATGTAATTTAACTCAGTATTCCCACATTGC...AAAGGTTTTGGATTTGGGGTTATAGAGTGAGTCATAGATAGAGTTAGGATTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR TCA 90 bp CAATTTACTGTACTAACCTGTAGCCAATCATATATGTGCTCAATAGAGAGTTCAGAAACAAAAAGGTACTaGAAGTCACAGCAAACCAAG +
Preference number: 4 (lower is better)
Translates to: QFTVLTCSQSYMCSIESSETKRY*KSQQTK
Trigger: CTTGGTTTGCTGTGACTTTCAGTACCTTTTTGTTTC...TGAACTCTCTATTGAGCACATATATGATTGGCTACAGGTTAGTACAGTAAATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR GCA 90 bp ACCATGATAGTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAACACACAGAACATTaGTGGTTACAACTAAGACTT +
Preference number: 4 (lower is better)
Translates to: TMIVPIHLSIKSFSSLFCKHTEH*WLQLRL
Trigger: AAGTCTTAGTTGTAACCAGCAATGTTCTGTGTGTTT...ACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAACTATCATGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR GCA 90 bp CCTAACTCTATCTATGACTCACTCTATAACCCCAAATCCAAAACCTTTCCTTGTGAAGAAACAACTATTTaGTGCATATGGATATGTCCT +
Preference number: 4 (lower is better)
Translates to: PNSIYDSLYNPKSKTFPCEETTI*CIWICP
Trigger: AGGACATATCCATATGCAGCAAATAGTTGTTTCTTC...ACAAGGAAAGGTTTTGGATTTGGGGTTATAGAGTGAGTCATAGATAGAGTTAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR TCA 90 bp CAATTTACTGTACTAACCTGTAGCCAATCATATATGTGCTCAATAGAGAGTTCAAGAAAAATTGAAACCTaGACACTTGCTGCAACAATC +
Preference number: 4 (lower is better)
Translates to: QFTVLTCSQSYMCSIESSRKIET*TLAATI
Trigger: GATTGTTGCAGCAAGTGTTCAGGTTTCAATTTTTCT...TGAACTCTCTATTGAGCACATATATGATTGGCTACAGGTTAGTACAGTAAATTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS TCA 90 bp CGCAAAGCTGCTTCGGCCGCTCGTCACTGCGTGTCCCTCTCAGCGTaGGCCGCGAGCTCAGCAGGGAGGCCCCGAGAACGGCGCGGGGCA +
Preference number: 5 (lower is better)
Translates to: RKAASAARHCVSLSA*AASSAGRPRERRGA
Trigger: TGCCCCGCGCCGTTCTCGGGGCCTCCCTGCTGAGCTCGCGGCTCACGCTGAGAGGGACACGCAGTGACGAGCGGCCGAAGCAGCTTTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000394947.8
ENST00000394949.8
ENST00000565264.1
ENST00000567289.5
ENST00000568919.1
CDS TCA 90 bp TGCACTACAAAACCACCGATGCGAGCTCCTTGCTGGGTCGCGGCCTaGCGGGTTCCGGCACCGAATGCTGACTCGACCGCCACGGCCAGG +
Preference number: 5 (lower is better)
Translates to: CTTKPPMRAPCWVAA*RVPAPNADSTATAR
Trigger: CCTGGCCGTGGCGGTCGAGTCAGCATTCGGTGCCGGAACCCGTCAGGCCGCGACCCAGCAAGGAGCTCGCATCGGTGGTTTTGTAGTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562776.5
CDS GCA 90 bp GGGCAGGGGCAAGCACCCGGTGCTGGTGAGGAAAAGCCTCTGTGCTaGCAGGGATCCGACGCTGCTGGGCTGCATACACCGGTGACTCCT +
Preference number: 5 (lower is better)
Translates to: GQGQAPGAGEEKPLC*QGSDAAGLHTPVTP
Trigger: AGGAGTCACCGGTGTATGCAGCCCAGCAGCGTCGGATCCCTGGCAGCACAGAGGCTTTTCCTCACCAGCACCGGGTGCTTGCCCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
ENST00000562776.5
ENST00000564778.5
ENST00000567289.5
ENST00000568190.1
ENST00000568309.5
ENST00000568431.5
ENST00000568919.1
ENST00000570115.5
CDS-3UTR CAA 90 bp GCTGCACCAGCCACACACAGGTCAGGTGGCCATGTCCCAGAGAGGCCCAGTGAGAGGCTGGGAAGGATGTaGGGGTGGTGGTTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: AAPATHRSGGHVPERPSERLGRM*GWWLRL
Trigger: CAGCCTCAACCACCACCCCAACATCCTTCCCAGCCT...CTCACTGGGCCTCTCTGGGACATGGCCACCTGACCTGTGTGTGGCTGGTGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS GCA 90 bp TCCGTGGGGCTGCACCGCTGTTGGGTGATGATGGCTGCTATGAACTaGTGCTATAGCGGGCCCATGACTGCCGGAGCTCTGTGGCATGGC +
Preference number: 5 (lower is better)
Translates to: SVGLHRCWVMMAAMN*CYSGPMTAGALWHG
Trigger: GCCATGCCACAGAGCTCCGGCAGTCATGGGCCCGCTATAGCAGCAGTTCATAGCAGCCATCATCACCCAACAGCGGTGCAGCCCCACGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
ENST00000562776.5
ENST00000564778.5
ENST00000567289.5
ENST00000568190.1
ENST00000568309.5
ENST00000568431.5
ENST00000570115.5
CDS CCA 90 bp CCTCTGAAATTGCTGCTGTCCCTGCACTGGTGCAACTGGTGGGGCTaGATGAGCATGACTCTGGACCACCTGGCCTCCGTGGGGCTGCAC +
Preference number: 5 (lower is better)
Translates to: PLKLLLSLHWCNWWG*MSMTLDHLASVGLH
Trigger: GTGCAGCCCCACGGAGGCCAGGTGGTCCAGAGTCATGCTCATCCAGCCCCACCAGTTGCACCAGTGCAGGGACAGCAGCAATTTCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
ENST00000562776.5
ENST00000564778.5
ENST00000567289.5
ENST00000568431.5
ENST00000570115.5
CDS CCA 90 bp GTGAGGCTGGACCGGCGGAGAACGTGGGGATGCATACGGTGGAAGTaGGGGAGTCTGCTGACTGGCCGGAGTATGTGCTTGCAGTTGGGA +
Preference number: 5 (lower is better)
Translates to: VRLDRRRTWGCIRWK*GSLLTGRSMCLQLG
Trigger: TCCCAACTGCAAGCACATACTCCGGCCAGTCAGCAGACTCCCCCACTTCCACCGTATGCATCCCCACGTTCTCCGCCGGTCCAGCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS CCA 90 bp TGGTGTGTGAGGCTGGACCGGCGGAGAACGTGGGGATGCATACGGTaGAAGTGGGGGAGTCTGCTGACTGGCCGGAGTATGTGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: WCVRLDRRRTWGCIR*KWGSLLTGRSMCLQ
Trigger: CTGCAAGCACATACTCCGGCCAGTCAGCAGACTCCCCCACTTCCACCGTATGCATCCCCACGTTCTCCGCCGGTCCAGCCTCACACACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS CCA 90 bp CAACGAGATTGTCACTGGTGTGTGAGGCTGGACCGGCGGAGAACGTaGGGATGCATACGGTGGAAGTGGGGGAGTCTGCTGACTGGCCGG +
Preference number: 5 (lower is better)
Translates to: QRDCHWCVRLDRRRT*GCIRWKWGSLLTGR
Trigger: CCGGCCAGTCAGCAGACTCCCCCACTTCCACCGTATGCATCCCCACGTTCTCCGCCGGTCCAGCCTCACACACCAGTGACAATCTCGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp GCTGCACCAGCCACACACAGGTCAGGTGGCCATGTCCCAGAGAGGCCCAGTGAGGCAGGGCTGTCACTCTaGTCTCGCTTTATGCCCAGC +
Preference number: 5 (lower is better)
Translates to: AAPATHRSGGHVPERPSEAGLSL*SRFMPS
Trigger: GCTGGGCATAAAGCGAGACAAGAGTGACAGCCCTGC...CTCACTGGGCCTCTCTGGGACATGGCCACCTGACCTGTGTGTGGCTGGTGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS TCA 90 bp GGCGGAGAACGTGGGGATGCATACGGTGGAAGTGGGGGAGTCTGCTaGCTGGCCGGAGTATGTGCTTGCAGTTGGGAGGGCTTGCTGACT +
Preference number: 5 (lower is better)
Translates to: GGERGDAYGGSGGVC*LAGVCACSWEGLLT
Trigger: AGTCAGCAAGCCCTCCCAACTGCAAGCACATACTCCGGCCAGTCAGCAGACTCCCCCACTTCCACCGTATGCATCCCCACGTTCTCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS TCA 90 bp GCTGACGTGGGAGGATCATGTGAGTCCAGGAGACAGAGGCTGAGGTaGGCTGAGATCTCGCTACTGCACTCGAGCCTTCCGAGCCAGGCG +
Preference number: 5 (lower is better)
Translates to: ADVGGSCESRRQRLR*AEISLLHSSLPSQA
Trigger: CGCCTGGCTCGGAAGGCTCGAGTGCAGTAGCGAGATCTCAGCTCACCTCAGCCTCTGTCTCCTGGACTCACATGATCCTCCCACGTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570115.5
CDS GCA 90 bp GATTGTCACTGGTGTGTGAGGCTGGACCGGCGGAGAACGTGGGGATaGATACGGTGGAAGTGGGGGAGTCTGCTGACTGGCCGGAGTATG +
Preference number: 5 (lower is better)
Translates to: DCHWCVRLDRRRTWG*IRWKWGSLLTGRSM
Trigger: CATACTCCGGCCAGTCAGCAGACTCCCCCACTTCCACCGTATGCATCCCCACGTTCTCCGCCGGTCCAGCCTCACACACCAGTGACAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS CCA 90 bp AGCATGACTCTGGACCACCTGGCCTCCGTGGGGCTGCACCGCTGTTaGGTGATGATGGCTGCTATGAACTGCTGCTATAGCGGGCCCATG +
Preference number: 5 (lower is better)
Translates to: SMTLDHLASVGLHRC*VMMAAMNCCYSGPM
Trigger: CATGGGCCCGCTATAGCAGCAGTTCATAGCAGCCATCATCACCCAACAGCGGTGCAGCCCCACGGAGGCCAGGTGGTCCAGAGTCATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
ENST00000562776.5
ENST00000564778.5
ENST00000567289.5
ENST00000568309.5
ENST00000568431.5
ENST00000570115.5
CDS CCA 90 bp CTTCAGCCTCTGAAATTGCTGCTGTCCCTGCACTGGTGCAACTGGTaGGGCTGGATGAGCATGACTCTGGACCACCTGGCCTCCGTGGGG +
Preference number: 5 (lower is better)
Translates to: LQPLKLLLSLHWCNW*GWMSMTLDHLASVG
Trigger: CCCCACGGAGGCCAGGTGGTCCAGAGTCATGCTCATCCAGCCCCACCAGTTGCACCAGTGCAGGGACAGCAGCAATTTCAGAGGCTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
ENST00000562776.5
ENST00000564778.5
ENST00000567289.5
ENST00000568431.5
ENST00000570115.5
CDS-3UTR CAA 90 bp GCTGCACCAGCCACACACAGGTCAGGTGGCCATGTCCCAGAGAGGCCCAGTGAGCGGCTTGTTGTTCAGTaGGGGCTTCTTGACAGTGCC +
Preference number: 5 (lower is better)
Translates to: AAPATHRSGGHVPERPSERLVVQ*GLLDSA
Trigger: GGCACTGTCAAGAAGCCCCAACTGAACAACAAGCCG...CTCACTGGGCCTCTCTGGGACATGGCCACCTGACCTGTGTGTGGCTGGTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS TCA 90 bp CTCTGTGCTGCCAGGGATCCGACGCTGCTGGGCTGCATACACCGGTaGCTCCTGGTCATCCAAACGCCGCTTCATTCTGTGCTCATGCTC +
Preference number: 5 (lower is better)
Translates to: LCAARDPTLLGCIHR*LLVIQTPLHSVLML
Trigger: GAGCATGAGCACAGAATGAAGCGGCGTTTGGATGACCAGGAGTCACCGGTGTATGCAGCCCAGCAGCGTCGGATCCCTGGCAGCACAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
ENST00000562776.5
ENST00000564778.5
ENST00000567289.5
ENST00000568190.1
ENST00000568309.5
ENST00000568431.5
ENST00000568919.1
ENST00000570115.5
CDS CCA 90 bp CTGCCAGGGATCCGACGCTGCTGGGCTGCATACACCGGTGACTCCTaGTCATCCAAACGCCGCTTCATTCTGTGCTCATGCTCAGGGATG +
Preference number: 5 (lower is better)
Translates to: LPGIRRCWAAYTGDS*SSKRRFILCSCSGM
Trigger: CATCCCTGAGCATGAGCACAGAATGAAGCGGCGTTTGGATGACCAGGAGTCACCGGTGTATGCAGCCCAGCAGCGTCGGATCCCTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
ENST00000562776.5
ENST00000564778.5
ENST00000567289.5
ENST00000568190.1
ENST00000568309.5
ENST00000568431.5
ENST00000568919.1
ENST00000570115.5
CDS CCA 90 bp CACCTTCAGCCTCTGAAATTGCTGCTGTCCCTGCACTGGTGCAACTaGTGGGGCTGGATGAGCATGACTCTGGACCACCTGGCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: HLQPLKLLLSLHWCN*WGWMSMTLDHLASV
Trigger: CACGGAGGCCAGGTGGTCCAGAGTCATGCTCATCCAGCCCCACCAGTTGCACCAGTGCAGGGACAGCAGCAATTTCAGAGGCTGAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
ENST00000562776.5
ENST00000564778.5
ENST00000567289.5
ENST00000568431.5
ENST00000570115.5
CDS TCA 90 bp TTCTGCAAGGATGGGGCCGTTCCCAACGAGATTGTCACTGGTGTGTaGGGCTGGACCGGCGGAGAACGTGGGGATGCATACGGTGGAAGT +
Preference number: 5 (lower is better)
Translates to: FCKDGAVPNEIVTGV*GWTGGERGDAYGGS
Trigger: ACTTCCACCGTATGCATCCCCACGTTCTCCGCCGGTCCAGCCTCACACACCAGTGACAATCTCGTTGGGAACGGCCCCATCCTTGCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS TCA 90 bp GCTGACGTGGGAGGATCATGTGAGTCCAGGAGACAGAGGCTGAGGTaGGCTGAGATCTCGCTACTGCACTCGAGCCGCAAAGCTGCTTCG +
Preference number: 5 (lower is better)
Translates to: ADVGGSCESRRQRLR*AEISLLHSSRKAAS
Trigger: CGAAGCAGCTTTGCGGCTCGAGTGCAGTAGCGAGATCTCAGCTCACCTCAGCCTCTGTCTCCTGGACTCACATGATCCTCCCACGTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565264.1
CDS GCA 90 bp ACCGGTGACTCCTGGTCATCCAAACGCCGCTTCATTCTGTGCTCATaGTCAGGGATGCACTACAAAACCTCGGCCGCGGAACTCCGAGCC +
Preference number: 5 (lower is better)
Translates to: TGDSWSSKRRFILCS*SGMHYKTSAAELRA
Trigger: GGCTCGGAGTTCCGCGGCCGAGGTTTTGTAGTGCATCCCTGAGCATGAGCACAGAATGAAGCGGCGTTTGGATGACCAGGAGTCACCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360439.8
CDS CCA 90 bp CGCATCCTCCACCTTCAGCCTCTGAAATTGCTGCTGTCCCTGCACTaGTGCAACTGGTGGGGCTGGATGAGCATGACTCTGGACCACCTG +
Preference number: 5 (lower is better)
Translates to: RILHLQPLKLLLSLH*CNWWGWMSMTLDHL
Trigger: CAGGTGGTCCAGAGTCATGCTCATCCAGCCCCACCAGTTGCACCAGTGCAGGGACAGCAGCAATTTCAGAGGCTGAAGGTGGAGGATGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
ENST00000562776.5
ENST00000564778.5
ENST00000568431.5
CDS CCA 90 bp GGAGGGGTGGTTCCTGTAGGATGTCTGCGGATCTGGCAGCCATTCTaGCTGGGCCTCTGCGGCTTGTTGTTCAGTTGGGGCTTCTTGACA +
Preference number: 5 (lower is better)
Translates to: GGVVPVGCLRIWQPF*LGLCGLLFSWGFLT
Trigger: TGTCAAGAAGCCCCAACTGAACAACAAGCCGCAGAGGCCCAGCCAGAATGGCTGCCAGATCCGCAGACATCCTACAGGAACCACCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp ATGTTCCTAACAGGTAGCCCACTTGGTGCCAGGCTGCACCAGCCACACACAGGTAGGCTGGGAAGGATGTaGGGGTGGTGGTTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: MFLTGSPLGARLHQPHTGRLGRM*GWWLRL
Trigger: CAGCCTCAACCACCACCCCAACATCCTTCCCAGCCT...ACCTGTGTGTGGCTGGTGCAGCCTGGCACCAAGTGGGCTACCTGTTAGGAACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp ATGTTCCTAACAGGTAGCCCACTTGGTGCCAGGCTGCACCAGCCACACACAGGTTGCAGTTGGGAGGGCTaGCTGACTTTGGCAGGTGGG +
Preference number: 5 (lower is better)
Translates to: MFLTGSPLGARLHQPHTGCSWEG*LTLAGG
Trigger: CCCACCTGCCAAAGTCAGCAAGCCCTCCCAACTGCA...ACCTGTGTGTGGCTGGTGCAGCCTGGCACCAAGTGGGCTACCTGTTAGGAACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp GCTGCACCAGCCACACACAGGTCAGGTGGCCATGTCCCAGAGAGGCCCAGTGAGCCCACAAAGCTCTTTTaGGCACCCTACACTTTGGCT +
Preference number: 5 (lower is better)
Translates to: AAPATHRSGGHVPERPSEPTKLF*APYTLA
Trigger: AGCCAAAGTGTAGGGTGCCAAAAAGAGCTTTGTGGG...CTCACTGGGCCTCTCTGGGACATGGCCACCTGACCTGTGTGTGGCTGGTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS GCA 90 bp ACCGGTGACTCCTGGTCATCCAAACGCCGCTTCATTCTGTGCTCATaGTCAGGGATGCACTACAAAACCCTCGAGTCCGGCGTTACCCGC +
Preference number: 5 (lower is better)
Translates to: TGDSWSSKRRFILCS*SGMHYKTLESGVTR
Trigger: GCGGGTAACGCCGGACTCGAGGGTTTTGTAGTGCATCCCTGAGCATGAGCACAGAATGAAGCGGCGTTTGGATGACCAGGAGTCACCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394949.8
CDS CCA 90 bp TTGATTGTTCTGCAAGGATGGGGCCGTTCCCAACGAGATTGTCACTaGTGTGTGAGGCTGGACCGGCGGAGAACGTGGGGATGCATACGG +
Preference number: 5 (lower is better)
Translates to: LIVLQGWGRSQRDCH*CVRLDRRRTWGCIR
Trigger: CCGTATGCATCCCCACGTTCTCCGCCGGTCCAGCCTCACACACCAGTGACAATCTCGTTGGGAACGGCCCCATCCTTGCAGAACAATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AGGCCCACACACACATCCCCACACACACCCCAAGTTATCTGCTCTGGCTTTGCACTGGGCCTCTGCGGCTaGTTGTTCAGTTGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: RPTHTSPHTPQVICSGFALGLCG*LFSWGF
Trigger: GAAGCCCCAACTGAACAACAAGCCGCAGAGGCCCAG...TGCAAAGCCAGAGCAGATAACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS GCA 90 bp GCATACACCGGTGACTCCTGGTCATCCAAACGCCGCTTCATTCTGTaGTCATGCTCAGGGATGCACTACAAAACCTCGGCCGCGGAACTC +
Preference number: 5 (lower is better)
Translates to: AYTGDSWSSKRRFIL*SCSGMHYKTSAAEL
Trigger: GAGTTCCGCGGCCGAGGTTTTGTAGTGCATCCCTGAGCATGAGCACAGAATGAAGCGGCGTTTGGATGACCAGGAGTCACCGGTGTATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360439.8
CDS GCA 90 bp ACCGGTGACTCCTGGTCATCCAAACGCCGCTTCATTCTGTGCTCATaGTCAGGGATGCACTACAAAACCGCAAAGCTGCTTCGGCCGCTC +
Preference number: 5 (lower is better)
Translates to: TGDSWSSKRRFILCS*SGMHYKTAKLLRPL
Trigger: GAGCGGCCGAAGCAGCTTTGCGGTTTTGTAGTGCATCCCTGAGCATGAGCACAGAATGAAGCGGCGTTTGGATGACCAGGAGTCACCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394947.8
ENST00000567289.5
ENST00000568919.1
CDS GCA 90 bp ACCGGTGACTCCTGGTCATCCAAACGCCGCTTCATTCTGTGCTCATaGTCAGGGATGCACTACAAAACCTTCCGAGCCAGGCGAGGAGTC +
Preference number: 5 (lower is better)
Translates to: TGDSWSSKRRFILCS*SGMHYKTFRARRGV
Trigger: GACTCCTCGCCTGGCTCGGAAGGTTTTGTAGTGCATCCCTGAGCATGAGCACAGAATGAAGCGGCGTTTGGATGACCAGGAGTCACCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564778.5
CDS CCA 90 bp GCTGAATACCACCTTCAGCCTCTGAAATTGCTGCTGTCCCTGCACTaGTGCAACTGGTGGGGCTGGATGAGCATGACTCTGGACCACCTG +
Preference number: 5 (lower is better)
Translates to: AEYHLQPLKLLLSLH*CNWWGWMSMTLDHL
Trigger: CAGGTGGTCCAGAGTCATGCTCATCCAGCCCCACCAGTTGCACCAGTGCAGGGACAGCAGCAATTTCAGAGGCTGAAGGTGGTATTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR CAA 90 bp AGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGGCCGGAGTATGTGCTaGCAGTTGGGAGGGCTTGCT +
Preference number: 5 (lower is better)
Translates to: RPQETPVLALLVCASKLHGRSMC*QLGGLA
Trigger: AGCAAGCCCTCCCAACTGCAAGCACATACTCCGGCC...ATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATCTGGGCCTCTGCGGCTaGTTGTTCAGTTGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: RPQETPVLALLVCASKLHLGLCG*LFSWGF
Trigger: GAAGCCCCAACTGAACAACAAGCCGCAGAGGCCCAG...ATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp GCTGCACCAGCCACACACAGGTCAGGTGGCCATGTCCCAGAGAGGCCCAGTGAGTTGTCCAAGCGAAATTaGGCTTGTTCTTCAGCAGAC +
Preference number: 5 (lower is better)
Translates to: AAPATHRSGGHVPERPSELSKRN*ACSSAD
Trigger: GTCTGCTGAAGAACAAGCCAAATTTCGCTTGGACAA...CTCACTGGGCCTCTCTGGGACATGGCCACCTGACCTGTGTGTGGCTGGTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS GCA 90 bp GCATACACCGGTGACTCCTGGTCATCCAAACGCCGCTTCATTCTGTaGTCATGCTCAGGGATGCACTACAAAACCCTCGAGTCCGGCGTT +
Preference number: 5 (lower is better)
Translates to: AYTGDSWSSKRRFIL*SCSGMHYKTLESGV
Trigger: AACGCCGGACTCGAGGGTTTTGTAGTGCATCCCTGAGCATGAGCACAGAATGAAGCGGCGTTTGGATGACCAGGAGTCACCGGTGTATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394949.8
CDS GCA 90 bp ACCGGTGACTCCTGGTCATCCAAACGCCGCTTCATTCTGTGCTCATaGTCAGGGATGCACTACAAAACCACCGATGCGAGCTCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: TGDSWSSKRRFILCS*SGMHYKTTDASSLL
Trigger: CAGCAAGGAGCTCGCATCGGTGGTTTTGTAGTGCATCCCTGAGCATGAGCACAGAATGAAGCGGCGTTTGGATGACCAGGAGTCACCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562776.5
CDS GCA 90 bp GCATACACCGGTGACTCCTGGTCATCCAAACGCCGCTTCATTCTGTaGTCATGCTCAGGGATGCACTACAAAACCACCGATGCGAGCTCC +
Preference number: 5 (lower is better)
Translates to: AYTGDSWSSKRRFIL*SCSGMHYKTTDASS
Trigger: GGAGCTCGCATCGGTGGTTTTGTAGTGCATCCCTGAGCATGAGCACAGAATGAAGCGGCGTTTGGATGACCAGGAGTCACCGGTGTATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562776.5
CDS GCA 90 bp GCTCTCGACCACGTTGACACTTCCGGATCCGCCGTAGATTCCTATTaGAGAAAAGCCCCGGAGGATGAGAGCTCGTCCAGATGCAGATTC +
Preference number: 5 (lower is better)
Translates to: ALDHVDTSGSAVDSY*RKAPEDESSSRCRF
Trigger: GAATCTGCATCTGGACGAGCTCTCATCCTCCGGGGCTTTTCTGCAATAGGAATCTACGGCGGATCCGGAAGTGTCAACGTGGTCGAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566640.1
CDS GCA 90 bp GCATACACCGGTGACTCCTGGTCATCCAAACGCCGCTTCATTCTGTaGTCATGCTCAGGGATGCACTACAAAACCTTCCGAGCCAGGCGA +
Preference number: 5 (lower is better)
Translates to: AYTGDSWSSKRRFIL*SCSGMHYKTFRARR
Trigger: TCGCCTGGCTCGGAAGGTTTTGTAGTGCATCCCTGAGCATGAGCACAGAATGAAGCGGCGTTTGGATGACCAGGAGTCACCGGTGTATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564778.5
CDS-3UTR CAA 90 bp TCCCAGAGAGGCCCAGTGAGGCTTGAAAGGCATCTTCCTTGTTTCTTCAGTGTGATGTTGGGGTGGTGGTaGAGGCTGTGGCTGGATGCC +
Preference number: 5 (lower is better)
Translates to: SQRGPVRLERHLPCFFSVMLGWW*RLWLDA
Trigger: GGCATCCAGCCACAGCCTCAACCACCACCCCAACAT...CACACTGAAGAAACAAGGAAGATGCCTTTCAAGCCTCACTGGGCCTCTCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp GTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGATGTTGGGGTGGTGGTaGAGGCTGTGGCTGGATGCC +
Preference number: 5 (lower is better)
Translates to: VCASKLHVFACMDFLPLQMLGWW*RLWLDA
Trigger: GGCATCCAGCCACAGCCTCAACCACCACCCCAACAT...CTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp TCCCAGAGAGGCCCAGTGAGGCTTGAAAGGCATCTTCCTTGTTTCTTCAGTGTGAGGCTGGGAAGGATGTaGGGGTGGTGGTTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: SQRGPVRLERHLPCFFSVRLGRM*GWWLRL
Trigger: CAGCCTCAACCACCACCCCAACATCCTTCCCAGCCT...CACACTGAAGAAACAAGGAAGATGCCTTTCAAGCCTCACTGGGCCTCTCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp ATGTTCCTAACAGGTAGCCCACTTGGTGCCAGGCTGCACCAGCCACACACAGGTGCTGCTGGTAACTCTTaGGTAAGGCTCGATAGCTGG +
Preference number: 5 (lower is better)
Translates to: MFLTGSPLGARLHQPHTGAAGNS*VRLDSW
Trigger: CCAGCTATCGAGCCTTACCAAAGAGTTACCAGCAGC...ACCTGTGTGTGGCTGGTGCAGCCTGGCACCAAGTGGGCTACCTGTTAGGAACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp CTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCTGCTCTCGACCACGTaGACACTTCCGGATCCGCCG +
Preference number: 5 (lower is better)
Translates to: LCWCVQANCMSLLAWTSFLLSTT*TLPDPP
Trigger: CGGCGGATCCGGAAGTGTCAACGTGGTCGAGAGCAG...GAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS GCA 90 bp GCATACACCGGTGACTCCTGGTCATCCAAACGCCGCTTCATTCTGTaGTCATGCTCAGGGATGCACTACAAAACCGCAAAGCTGCTTCGG +
Preference number: 5 (lower is better)
Translates to: AYTGDSWSSKRRFIL*SCSGMHYKTAKLLR
Trigger: CCGAAGCAGCTTTGCGGTTTTGTAGTGCATCCCTGAGCATGAGCACAGAATGAAGCGGCGTTTGGATGACCAGGAGTCACCGGTGTATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394947.8
ENST00000567289.5
ENST00000568919.1
CDS CCA 90 bp AAGGATGTTGGGGTGGTGGTTGAGGCTGTGGCTGGATGCCATGGGTaGGAATCTGATGAACCTGGCCAGGAGTTGTCACATTCACCATGT +
Preference number: 5 (lower is better)
Translates to: KDVGVVVEAVAGCHG*ESDEPGQELSHSPC
Trigger: ACATGGTGAATGTGACAACTCCTGGCCAGGTTCATCAGATTCCCACCCATGGCATCCAGCCACAGCCTCAACCACCACCCCAACATCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp ATGTTCCTAACAGGTAGCCCACTTGGTGCCAGGCTGCACCAGCCACACACAGGTGGGGGCAAGAAGGTGTaGAATCCCATTATCAGATCG +
Preference number: 5 (lower is better)
Translates to: MFLTGSPLGARLHQPHTGGGKKV*NPIIRS
Trigger: CGATCTGATAATGGGATTCAACACCTTCTTGCCCCC...ACCTGTGTGTGGCTGGTGCAGCCTGGCACCAAGTGGGCTACCTGTTAGGAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp ATGTTCCTAACAGGTAGCCCACTTGGTGCCAGGCTGCACCAGCCACACACAGGTGAACCTGGCCAGGAGTaGTCACATTCACCATGTCAT +
Preference number: 5 (lower is better)
Translates to: MFLTGSPLGARLHQPHTGEPGQE*SHSPCH
Trigger: ATGACATGGTGAATGTGACAACTCCTGGCCAGGTTC...ACCTGTGTGTGGCTGGTGCAGCCTGGCACCAAGTGGGCTACCTGTTAGGAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp CTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCGGCCGGAGTATGTGCTaGCAGTTGGGAGGGCTTGCT +
Preference number: 5 (lower is better)
Translates to: LCWCVQANCMSLLAWTSFGRSMC*QLGGLA
Trigger: AGCAAGCCCTCCCAACTGCAAGCACATACTCCGGCC...GAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp CCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCCCGTTCCCAACGAGATaGTCACTGGTGTGTGAGGCT +
Preference number: 5 (lower is better)
Translates to: PQETPVLALLVCASKLHVPFPTR*SLVCEA
Trigger: AGCCTCACACACCAGTGACAATCTCGTTGGGAACGG...GACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp GCTGCACCAGCCACACACAGGTCAGGTGGCCATGTCCCAGAGAGGCCCAGTGAGAGCATCTTCCAGTATTaGTTTGTCTTCATACGCAAG +
Preference number: 5 (lower is better)
Translates to: AAPATHRSGGHVPERPSESIFQY*FVFIRK
Trigger: CTTGCGTATGAAGACAAACAAATACTGGAAGATGCT...CTCACTGGGCCTCTCTGGGACATGGCCACCTGACCTGTGTGTGGCTGGTGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp GTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGGGCTGCCCCCAACACCATaGTGCTTCTTAACTGCCCCT +
Preference number: 5 (lower is better)
Translates to: VCKQTACLCLHGLPSPPGLPPTP*CFLTAP
Trigger: AGGGGCAGTTAAGAAGCACAATGGTGTTGGGGGCAG...CCCTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATTGTGATGAGTCTATGTaGCCATCCAGCAGGCTCCGC +
Preference number: 5 (lower is better)
Translates to: RPQETPVLALLVCASKLHCDESM*PSSRLR
Trigger: GCGGAGCCTGCTGGATGGCAACATAGACTCATCACA...ATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS TCA 90 bp GCTTACCTGGTAGCTGGGTGTTACAGAGTACTGAATTCCCGTAGCTaGCTGCATGGTCTCAGACACTGCTTCATACACAGGAGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: AYLVAGCYRVLNSRS*LHGLRHCFIHRRGR
Trigger: CCTGCCCCTCCTGTGTATGAAGCAGTGTCTGAGACCATGCAGTCAGCTACGGGAATTCAGTACTCTGTAACACCCAGCTACCAGGTAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568919.1
CDS GCA 90 bp ACCGGTGACTCCTGGTCATCCAAACGCCGCTTCATTCTGTGCTCATaGTCAGGGATGCACTACAAAACCTGTAGTCCCAGCTACTTGGAG +
Preference number: 5 (lower is better)
Translates to: TGDSWSSKRRFILCS*SGMHYKTCSPSYLE
Trigger: CTCCAAGTAGCTGGGACTACAGGTTTTGTAGTGCATCCCTGAGCATGAGCACAGAATGAAGCGGCGTTTGGATGACCAGGAGTCACCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568431.5
CDS GCA 90 bp GCATACACCGGTGACTCCTGGTCATCCAAACGCCGCTTCATTCTGTaGTCATGCTCAGGGATGCACTACAAAACCTGTAGTCCCAGCTAC +
Preference number: 5 (lower is better)
Translates to: AYTGDSWSSKRRFIL*SCSGMHYKTCSPSY
Trigger: GTAGCTGGGACTACAGGTTTTGTAGTGCATCCCTGAGCATGAGCACAGAATGAAGCGGCGTTTGGATGACCAGGAGTCACCGGTGTATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568431.5
CDS-3UTR CAA 90 bp TCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTAGGCCACAGGAGACTGGGGCTGCACCGCTGTaGGGTGATGATGGCTGCTAT +
Preference number: 5 (lower is better)
Translates to: SKCEQHPVPSLKVRPQETGAAPL*GDDGCY
Trigger: ATAGCAGCCATCATCACCCAACAGCGGTGCAGCCCC...AGTCTCCTGTGGCCTAACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AAAATTGTGTGTGTGTGTGCGTGTGTGTGTCAGAGAGTAAAGCTGGTGGATGGCTGCAGTTGGGAGGGCTaGCTGACTTTGGCAGGTGGG +
Preference number: 5 (lower is better)
Translates to: KIVCVCACVCQRVKLVDGCSWEG*LTLAGG
Trigger: CCCACCTGCCAAAGTCAGCAAGCCCTCCCAACTGCA...GCCATCCACCAGCTTTACTCTCTGACACACACACGCACACACACACACAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AAAATTGTGTGTGTGTGTGCGTGTGTGTGTCAGAGAGTAAAGCTGGTGGATGGCGGCCGGAGTATGTGCTaGCAGTTGGGAGGGCTTGCT +
Preference number: 5 (lower is better)
Translates to: KIVCVCACVCQRVKLVDGGRSMC*QLGGLA
Trigger: AGCAAGCCCTCCCAACTGCAAGCACATACTCCGGCC...GCCATCCACCAGCTTTACTCTCTGACACACACACGCACACACACACACAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp CACAAAGCTCTTTTTGGCACCCTACACTTTGGCTCACAGTCTCTTCTCCCCAGTGGCCTCTGCGGCTTGTaGTTCAGTTGGGGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: HKALFGTLHFGSQSLLPSGLCGL*FSWGFL
Trigger: CAAGAAGCCCCAACTGAACAACAAGCCGCAGAGGCC...ACTGGGGAGAAGAGACTGTGAGCCAAAGTGTAGGGTGCCAAAAAGAGCTTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CAA 90 bp AGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGCTGCTGGTAACTCTTaGGTAAGGCTCGATAGCTGG +
Preference number: 5 (lower is better)
Translates to: RPQETPVLALLVCASKLHAAGNS*VRLDSW
Trigger: CCAGCTATCGAGCCTTACCAAAGAGTTACCAGCAGC...ATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp ATGTTCCTAACAGGTAGCCCACTTGGTGCCAGGCTGCACCAGCCACACACAGGTCCAGAACCCGGATTGTaGCCAGATTGGTCTCTAAAA +
Preference number: 5 (lower is better)
Translates to: MFLTGSPLGARLHQPHTGPEPGL*PDWSLK
Trigger: TTTTAGAGACCAATCTGGCAACAATCCGGGTTCTGG...ACCTGTGTGTGGCTGGTGCAGCCTGGCACCAAGTGGGCTACCTGTTAGGAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp GTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGTGTGATGAGTCTATGTaGCCATCCAGCAGGCTCCGC +
Preference number: 5 (lower is better)
Translates to: VCASKLHVFACMDFLPLQCDESM*PSSRLR
Trigger: GCGGAGCCTGCTGGATGGCAACATAGACTCATCACA...CTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp ATGTTCCTAACAGGTAGCCCACTTGGTGCCAGGCTGCACCAGCCACACACAGGTTTCTCCATGGTCTTCTaGCTGTTTCCTTCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: MFLTGSPLGARLHQPHTGFSMVF*LFPSFP
Trigger: AGGGAAGGAAGGAAACAGCAAGAAGACCATGGAGAA...ACCTGTGTGTGGCTGGTGCAGCCTGGCACCAAGTGGGCTACCTGTTAGGAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp CCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCGGGGGCAAGAAGGTGTaGAATCCCATTATCAGATCG +
Preference number: 5 (lower is better)
Translates to: PQETPVLALLVCASKLHVGGKKV*NPIIRS
Trigger: CGATCTGATAATGGGATTCAACACCTTCTTGCCCCC...GACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGAACCTGGCCAGGAGTaGTCACATTCACCATGTCAT +
Preference number: 5 (lower is better)
Translates to: RPQETPVLALLVCASKLHEPGQE*SHSPCH
Trigger: ATGACATGGTGAATGTGACAACTCCTGGCCAGGTTC...ATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp CAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTCCGTTCCCAACGAGATaGTCACTGGTGTGTGAGGCT +
Preference number: 5 (lower is better)
Translates to: QETPVLALLVCASKLHVFPFPTR*SLVCEA
Trigger: AGCCTCACACACCAGTGACAATCTCGTTGGGAACGG...AAAGACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp CCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCGTTCCACCACCATGTTaGCTGGCATCTGCCATAGAA +
Preference number: 5 (lower is better)
Translates to: PQETPVLALLVCASKLHVVPPPC*LASAIE
Trigger: TTCTATGGCAGATGCCAGCAAACATGGTGGTGGAAC...GACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp GTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGGGCTTCCAGAACCCGGATaGTTGCCAGATTGGTCTCTA +
Preference number: 5 (lower is better)
Translates to: VCKQTACLCLHGLPSPPGLPEPG*LPDWSL
Trigger: TAGAGACCAATCTGGCAACAATCCGGGTTCTGGAAG...CCCTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp CTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCGTGCCCCCAAGGGTGTaGTCCAAGCGAAATTTGGCT +
Preference number: 5 (lower is better)
Translates to: LCWCVQANCMSLLAWTSFVPPRV*SKRNLA
Trigger: AGCCAAATTTCGCTTGGACAACACCCTTGGGGGCAC...GAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp CCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCCTCCGTAGCCTGCTCTaGCCTCTCATCATAGATACT +
Preference number: 5 (lower is better)
Translates to: PQETPVLALLVCASKLHVLRSLL*PLIIDT
Trigger: AGTATCTATGATGAGAGGCAAGAGCAGGCTACGGAG...GACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATCTCCGTAGCCTGCTCTaGCCTCTCATCATAGATACT +
Preference number: 5 (lower is better)
Translates to: RPQETPVLALLVCASKLHLRSLL*PLIIDT
Trigger: AGTATCTATGATGAGAGGCAAGAGCAGGCTACGGAG...ATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp GTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGGGCAGCTGGACCTGGCCTaGGCTCTGAATAAACATAAG +
Preference number: 5 (lower is better)
Translates to: VCKQTACLCLHGLPSPPGQLDLA*ALNKHK
Trigger: CTTATGTTTATTCAGAGCCAAGGCCAGGTCCAGCTG...CCCTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp TTTGCCCTAAAATCTCATCCCACAAAGCTCTTTTTGGCACCCTACACTTTGGCTCTGCTCTCGACCACGTaGACACTTCCGGATCCGCCG +
Preference number: 5 (lower is better)
Translates to: FALKSHPTKLFLAPYTLALLSTT*TLPDPP
Trigger: CGGCGGATCCGGAAGTGTCAACGTGGTCGAGAGCAG...AGCCAAAGTGTAGGGTGCCAAAAAGAGCTTTGTGGGATGAGATTTTAGGGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CAA 90 bp CTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCGGGGCACATGCTCCTaGGTCCATTTATCTACCCAG +
Preference number: 5 (lower is better)
Translates to: LCWCVQANCMSLLAWTSFRGTCS*VHLSTQ
Trigger: CTGGGTAGATAAATGGACCAAGGAGCATGTGCCCCG...GAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp CCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCACTGCATGTCTTTGCTaGCATGGACTTCCTTCCCCT +
Preference number: 5 (lower is better)
Translates to: PQETPVLALLVCASKLHVTACLC*HGLPSP
Trigger: AGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGT...GACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS TCA 90 bp CATTCTGGCTGGGCCTCTGCGGCTTGTTGTTCAGTTGGGGCTTCTTaGCAGTGCCTCCATGATCATTTCTCACAGAATCAACCTTCTCAG +
Preference number: 5 (lower is better)
Translates to: HSGWASAACCSVGAS*QCLHDHFSQNQPSQ
Trigger: CTGAGAAGGTTGATTCTGTGAGAAATGATCATGGAGGCACTGTCAAGAAGCCCCAACTGAACAACAAGCCGCAGAGGCCCAGCCAGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS TCA 90 bp CAGAGCAGCAGCATCTTCCAGTATTTGTTTGTCTTCATACGCAAGTaGGAGGTGTGGGCCAACAGGTACACCAGCATTCTCCTCCGTAGC +
Preference number: 5 (lower is better)
Translates to: QSSSIFQYLFVFIRK*EVWANRYTSILLRS
Trigger: GCTACGGAGGAGAATGCTGGTGTACCTGTTGGCCCACACCTCTCACTTGCGTATGAAGACAAACAAATACTGGAAGATGCTGCTGCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS GCA 90 bp GCATACACCGGTGACTCCTGGTCATCCAAACGCCGCTTCATTCTGTaGTCATGCTCAGGGATGCACTACAAAACCTGTAATCCCAGCTAT +
Preference number: 5 (lower is better)
Translates to: AYTGDSWSSKRRFIL*SCSGMHYKTCNPSY
Trigger: ATAGCTGGGATTACAGGTTTTGTAGTGCATCCCTGAGCATGAGCACAGAATGAAGCGGCGTTTGGATGACCAGGAGTCACCGGTGTATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565264.1
ENST00000570115.5
CDS CCA 90 bp GTTGATGGCATGATTAAACTCCACAGGTTGATTGTTCTGCAAGGATaGGGCCGTTCCCAACGAGATTGTCACTGGTGTGTGAGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: VDGMIKLHRLIVLQG*GRSQRDCHWCVRLD
Trigger: GTCCAGCCTCACACACCAGTGACAATCTCGTTGGGAACGGCCCCATCCTTGCAGAACAATCAACCTGTGGAGTTTAATCATGCCATCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp TTTGCCCTAAAATCTCATCCCACAAAGCTCTTTTTGGCACCCTACACTTTGGCTGGGGCTGCACCGCTGTaGGGTGATGATGGCTGCTAT +
Preference number: 5 (lower is better)
Translates to: FALKSHPTKLFLAPYTLAGAAPL*GDDGCY
Trigger: ATAGCAGCCATCATCACCCAACAGCGGTGCAGCCCC...AGCCAAAGTGTAGGGTGCCAAAAAGAGCTTTGTGGGATGAGATTTTAGGGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CAA 90 bp CTAAAATCTCATCCCACAAAGCTCTTTTTGGCACCCTACACTTTGGCTCACAGTTGCAGTTGGGAGGGCTaGCTGACTTTGGCAGGTGGG +
Preference number: 5 (lower is better)
Translates to: LKSHPTKLFLAPYTLAHSCSWEG*LTLAGG
Trigger: CCCACCTGCCAAAGTCAGCAAGCCCTCCCAACTGCA...ACTGTGAGCCAAAGTGTAGGGTGCCAAAAAGAGCTTTGTGGGATGAGATTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CAA 90 bp AAAATTGTGTGTGTGTGTGCGTGTGTGTGTCAGAGAGTAAAGCTGGTGGATGGCCCGTTCCCAACGAGATaGTCACTGGTGTGTGAGGCT +
Preference number: 5 (lower is better)
Translates to: KIVCVCACVCQRVKLVDGPFPTR*SLVCEA
Trigger: AGCCTCACACACCAGTGACAATCTCGTTGGGAACGG...GCCATCCACCAGCTTTACTCTCTGACACACACACGCACACACACACACAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp CCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCAAAAGCACGGAGCTGTaGGCATCTGGTAGGAATTGT +
Preference number: 5 (lower is better)
Translates to: PQETPVLALLVCASKLHVKSTEL*ASGRNC
Trigger: ACAATTCCTACCAGATGCCAACAGCTCCGTGCTTTT...GACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp TGCATCTCCATCCAGTCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTGGCCTCTGCGGCTTGTaGTTCAGTTGGGGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: CISIQSKCEQHPVPSLKVGLCGL*FSWGFL
Trigger: CAAGAAGCCCCAACTGAACAACAAGCCGCAGAGGCC...AACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGACTGGATGGAGATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp CCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCCTGTGGCTCGCTCCTTaGGATAAGTTTCCAGATGTA +
Preference number: 5 (lower is better)
Translates to: PQETPVLALLVCASKLHVLWLAP*DKFPDV
Trigger: TACATCTGGAAACTTATCCAAAGGAGCGAGCCACAG...GACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp TCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTAGGCCACAGGAGACTGTGCCCCCAAGGGTGTaGTCCAAGCGAAATTTGGCT +
Preference number: 5 (lower is better)
Translates to: SKCEQHPVPSLKVRPQETVPPRV*SKRNLA
Trigger: AGCCAAATTTCGCTTGGACAACACCCTTGGGGGCAC...AGTCTCCTGTGGCCTAACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AGGCCCACACACACATCCCCACACACACCCCAAGTTATCTGCTCTGGCTTTGCAGTTTTCTTCTTCAATTaGCCGTTCGGCTTGGGAACA +
Preference number: 5 (lower is better)
Translates to: RPTHTSPHTPQVICSGFAVFFFN*PFGLGT
Trigger: TGTTCCCAAGCCGAACGGCAAATTGAAGAAGAAAAC...TGCAAAGCCAGAGCAGATAACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AAAATTGTGTGTGTGTGTGCGTGTGTGTGTCAGAGAGTAAAGCTGGTGGATGGCCGGGGCACATGCTCCTaGGTCCATTTATCTACCCAG +
Preference number: 5 (lower is better)
Translates to: KIVCVCACVCQRVKLVDGRGTCS*VHLSTQ
Trigger: CTGGGTAGATAAATGGACCAAGGAGCATGTGCCCCG...GCCATCCACCAGCTTTACTCTCTGACACACACACGCACACACACACACAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp ATGTTCCTAACAGGTAGCCCACTTGGTGCCAGGCTGCACCAGCCACACACAGGTTATACCCAAAACCCTTaGGGAAAAGTTCCAGCTTCA +
Preference number: 5 (lower is better)
Translates to: MFLTGSPLGARLHQPHTGYTQNP*GKVPAS
Trigger: TGAAGCTGGAACTTTTCCCAAAGGGTTTTGGGTATA...ACCTGTGTGTGGCTGGTGCAGCCTGGCACCAAGTGGGCTACCTGTTAGGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp GCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCATCCGGTTCCCTCATaGAAAGTTAGGCCACAGGAG +
Preference number: 5 (lower is better)
Translates to: ALLVCASKLHVFACMDFLHPVPS*KVRPQE
Trigger: CTCCTGTGGCCTAACTTTCAATGAGGGAACCGGATG...AAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AGGCCCACACACACATCCCCACACACACCCCAAGTTATCTGCTCTGGCTTTGCATTGAACTCGTTGAGGTaGAGAACCAGAGGAGAGAAA +
Preference number: 5 (lower is better)
Translates to: RPTHTSPHTPQVICSGFALNSLR*RTRGEK
Trigger: TTTCTCTCCTCTGGTTCTCAACCTCAACGAGTTCAA...TGCAAAGCCAGAGCAGATAACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGGTTTGGTATTTAAGTaGCTCACCCCCATCCATCAC +
Preference number: 5 (lower is better)
Translates to: RPQETPVLALLVCASKLHGLVFK*LTPIHH
Trigger: GTGATGGATGGGGGTGAGCAACTTAAATACCAAACC...ATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS CCA 90 bp TCCCATTCTCTCTCTCGGTTTTCTTCTTCAATTTGCCGTTCGGCTTaGGAACAAATCCGTAGCAGCCTCAGGCAGAGAATCTGGTGCAGT +
Preference number: 5 (lower is better)
Translates to: SHSLSRFSSSICRSA*EQIRSSLRQRIWCS
Trigger: ACTGCACCAGATTCTCTGCCTGAGGCTGCTACGGATTTGTTCCCAAGCCGAACGGCAAATTGAAGAAGAAAACCGAGAGAGAGAATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp GTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGGGCACCATGTCATTGGTTaGCACCTCAATTTTGTAGCC +
Preference number: 5 (lower is better)
Translates to: VCKQTACLCLHGLPSPPGHHVIG*HLNFVA
Trigger: GGCTACAAAATTGAGGTGCAAACCAATGACATGGTG...CCCTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp GCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTGAACCTGGCCAGGAGTaGTCACATTCACCATGTCAT +
Preference number: 5 (lower is better)
Translates to: ALLVCASKLHVFACMDFLEPGQE*SHSPCH
Trigger: ATGACATGGTGAATGTGACAACTCCTGGCCAGGTTC...AAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AGGCCCACACACACATCCCCACACACACCCCAAGTTATCTGCTCTGGCTTTGCAGAAGAATCCTTCAGATaGAGCAGTTTGGGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: RPTHTSPHTPQVICSGFAEESFR*SSLGFF
Trigger: GAAGAAACCCAAACTGCTCAATCTGAAGGATTCTTC...TGCAAAGCCAGAGCAGATAACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp TCATTGAAAGTTAGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAGTTCCACCACCATGTTaGCTGGCATCTGCCATAGAA +
Preference number: 5 (lower is better)
Translates to: SLKVRPQETPVLALLVCAVPPPC*LASAIE
Trigger: TTCTATGGCAGATGCCAGCAAACATGGTGGTGGAAC...TGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCTAACTTTCAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp CTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCGTTCCACCACCATGTTaGCTGGCATCTGCCATAGAA +
Preference number: 5 (lower is better)
Translates to: LCWCVQANCMSLLAWTSFVPPPC*LASAIE
Trigger: TTCTATGGCAGATGCCAGCAAACATGGTGGTGGAAC...GAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp CAAGTCAGACACTGCCCCAGCTTTGCCCTAAAATCTCATCCCACAAAGCTCTTTGCTGCTGGTAACTCTTaGGTAAGGCTCGATAGCTGG +
Preference number: 5 (lower is better)
Translates to: QVRHCPSFALKSHPTKLFAAGNS*VRLDSW
Trigger: CCAGCTATCGAGCCTTACCAAAGAGTTACCAGCAGC...AAAGAGCTTTGTGGGATGAGATTTTAGGGCAAAGCTGGGGCAGTGTCTGACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CAA 90 bp TCCCAGAGAGGCCCAGTGAGGCTTGAAAGGCATCTTCCTTGTTTCTTCAGTGTGCAAGCGAAATTTGGCTaGTTCTTCAGCAGACAAGCG +
Preference number: 5 (lower is better)
Translates to: SQRGPVRLERHLPCFFSVQAKFG*FFSRQA
Trigger: CGCTTGTCTGCTGAAGAACAAGCCAAATTTCGCTTG...CACACTGAAGAAACAAGGAAGATGCCTTTCAAGCCTCACTGGGCCTCTCTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp GTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGGGTTGTCCAAGCGAAATTaGGCTTGTTCTTCAGCAGAC +
Preference number: 5 (lower is better)
Translates to: VCKQTACLCLHGLPSPPGLSKRN*ACSSAD
Trigger: GTCTGCTGAAGAACAAGCCAAATTTCGCTTGGACAA...CCCTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp GTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGGGTCATTCTGTTTAAAGTaGATCCCCTGGTGGTCCAGA +
Preference number: 5 (lower is better)
Translates to: VCKQTACLCLHGLPSPPGSFCLK*IPWWSR
Trigger: TCTGGACCACCAGGGGATCAACTTTAAACAGAATGA...CCCTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp CCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCGTTTTCTTCTTCAATTaGCCGTTCGGCTTGGGAACA +
Preference number: 5 (lower is better)
Translates to: PQETPVLALLVCASKLHVVFFFN*PFGLGT
Trigger: TGTTCCCAAGCCGAACGGCAAATTGAAGAAGAAAAC...GACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp GTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGGGATGCTCTGGATCAGTTaGTCCATGGTAAAGGCAATG +
Preference number: 5 (lower is better)
Translates to: VCKQTACLCLHGLPSPPGMLWIS*SMVKAM
Trigger: CATTGCCTTTACCATGGACAAACTGATCCAGAGCAT...CCCTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp GTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGGGTTATCTGCTCTGGCTTaGCAGTTAAGGGGCTTTGAA +
Preference number: 5 (lower is better)
Translates to: VCKQTACLCLHGLPSPPGLSALA*QLRGFE
Trigger: TTCAAAGCCCCTTAACTGCAAAGCCAGAGCAGATAA...CCCTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AGGCCCACACACACATCCCCACACACACCCCAAGTTATCTGCTCTGGCTTTGCATATACCCAAAACCCTTaGGGAAAAGTTCCAGCTTCA +
Preference number: 5 (lower is better)
Translates to: RPTHTSPHTPQVICSGFAYTQNP*GKVPAS
Trigger: TGAAGCTGGAACTTTTCCCAAAGGGTTTTGGGTATA...TGCAAAGCCAGAGCAGATAACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AAAATTGTGTGTGTGTGTGCGTGTGTGTGTCAGAGAGTAAAGCTGGTGGATGGCCATCCGGTTCCCTCATaGAAAGTTAGGCCACAGGAG +
Preference number: 5 (lower is better)
Translates to: KIVCVCACVCQRVKLVDGHPVPS*KVRPQE
Trigger: CTCCTGTGGCCTAACTTTCAATGAGGGAACCGGATG...GCCATCCACCAGCTTTACTCTCTGACACACACACGCACACACACACACAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AAAATTGTGTGTGTGTGTGCGTGTGTGTGTCAGAGAGTAAAGCTGGTGGATGGCTTGGCACCCTACACTTaGGCTCACAGTCTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: KIVCVCACVCQRVKLVDGLAPYT*AHSLFS
Trigger: GGAGAAGAGACTGTGAGCCAAAGTGTAGGGTGCCAA...GCCATCCACCAGCTTTACTCTCTGACACACACACGCACACACACACACAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CAA 90 bp AGGCCCACACACACATCCCCACACACACCCCAAGTTATCTGCTCTGGCTTTGCAGTAAAACTTACTCTTTaGTTGGTTGCACTGGTGGGT +
Preference number: 5 (lower is better)
Translates to: RPTHTSPHTPQVICSGFAVKLTL*LVALVG
Trigger: ACCCACCAGTGCAACCAACAAAAGAGTAAGTTTTAC...TGCAAAGCCAGAGCAGATAACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CAA 90 bp TCCCAGAGAGGCCCAGTGAGGCTTGAAAGGCATCTTCCTTGTTTCTTCAGTGTGCACCATGTCATTGGTTaGCACCTCAATTTTGTAGCC +
Preference number: 5 (lower is better)
Translates to: SQRGPVRLERHLPCFFSVHHVIG*HLNFVA
Trigger: GGCTACAAAATTGAGGTGCAAACCAATGACATGGTG...CACACTGAAGAAACAAGGAAGATGCCTTTCAAGCCTCACTGGGCCTCTCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp GTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGCACCATGTCATTGGTTaGCACCTCAATTTTGTAGCC +
Preference number: 5 (lower is better)
Translates to: VCASKLHVFACMDFLPLQHHVIG*HLNFVA
Trigger: GGCTACAAAATTGAGGTGCAAACCAATGACATGGTG...CTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp CCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCATTAAACTCCACAGGTaGATTGTTCTGCAAGGATGG +
Preference number: 5 (lower is better)
Translates to: PQETPVLALLVCASKLHVIKLHR*IVLQGW
Trigger: CCATCCTTGCAGAACAATCAACCTGTGGAGTTTAAT...GACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATTTTGTAGATGTCTGGTaGGCCCTGAAATCTGTTCTT +
Preference number: 5 (lower is better)
Translates to: RPQETPVLALLVCASKLHFVDVW*ALKSVL
Trigger: AAGAACAGATTTCAGGGCCAACCAGACATCTACAAA...ATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp CTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCAAAAGCACGGAGCTGTaGGCATCTGGTAGGAATTGT +
Preference number: 5 (lower is better)
Translates to: LCWCVQANCMSLLAWTSFKSTEL*ASGRNC
Trigger: ACAATTCCTACCAGATGCCAACAGCTCCGTGCTTTT...GAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp GTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGGGGAAGAATCCTTCAGATaGAGCAGTTTGGGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: VCKQTACLCLHGLPSPPGEESFR*SSLGFF
Trigger: GAAGAAACCCAAACTGCTCAATCTGAAGGATTCTTC...CCCTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp TCATTGAAAGTTAGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCACTGTGGCTCGCTCCTTaGGATAAGTTTCCAGATGTA +
Preference number: 5 (lower is better)
Translates to: SLKVRPQETPVLALLVCALWLAP*DKFPDV
Trigger: TACATCTGGAAACTTATCCAAAGGAGCGAGCCACAG...TGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCTAACTTTCAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp CCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCCGGATTGTTGCCAGATaGGTCTCTAAAACTACATCA +
Preference number: 5 (lower is better)
Translates to: PQETPVLALLVCASKLHVRIVAR*VSKTTS
Trigger: TGATGTAGTTTTAGAGACCAATCTGGCAACAATCCG...GACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp TCATTGAAAGTTAGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCACCAGAACCCGGATTGTaGCCAGATTGGTCTCTAAAA +
Preference number: 5 (lower is better)
Translates to: SLKVRPQETPVLALLVCAPEPGL*PDWSLK
Trigger: TTTTAGAGACCAATCTGGCAACAATCCGGGTTCTGG...TGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCTAACTTTCAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp TCCCAGAGAGGCCCAGTGAGGCTTGAAAGGCATCTTCCTTGTTTCTTCAGTGTGTCATTCTGTTTAAAGTaGATCCCCTGGTGGTCCAGA +
Preference number: 5 (lower is better)
Translates to: SQRGPVRLERHLPCFFSVSFCLK*IPWWSR
Trigger: TCTGGACCACCAGGGGATCAACTTTAAACAGAATGA...CACACTGAAGAAACAAGGAAGATGCCTTTCAAGCCTCACTGGGCCTCTCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AGGCCCACACACACATCCCCACACACACCCCAAGTTATCTGCTCTGGCTTTGCATCTTCCAGTATTTGTTaGTCTTCATACGCAAGTGAG +
Preference number: 5 (lower is better)
Translates to: RPTHTSPHTPQVICSGFASSSIC*SSYASE
Trigger: CTCACTTGCGTATGAAGACAAACAAATACTGGAAGA...TGCAAAGCCAGAGCAGATAACTTGGGGTGTGTGTGGGGATGTGTGTGTGGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp CTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCTTACTAAACAGTAACTaGGACTTAGGGGGACTGCCC +
Preference number: 5 (lower is better)
Translates to: LCWCVQANCMSLLAWTSFLLNSN*DLGGLP
Trigger: GGGCAGTCCCCCTAAGTCCAAGTTACTGTTTAGTAA...GAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AAAAGGACAACTGATTTGAACTCGTTGAGGTTGAGAACCAGAGGAGAGAAAAGGGCAGGGCTGTCACTCTaGTCTCGCTTTATGCCCAGC +
Preference number: 5 (lower is better)
Translates to: KRTTDLNSLRLRTRGEKRAGLSL*SRFMPS
Trigger: GCTGGGCATAAAGCGAGACAAGAGTGACAGCCCTGC...CCTTTTCTCTCCTCTGGTTCTCAACCTCAACGAGTTCAAATCAGTTGTCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp ACCATGATAGTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTCTGCTCTCGACCACGTaGACACTTCCGGATCCGCCG +
Preference number: 5 (lower is better)
Translates to: TMIVPIHLSIKSFSSLFCLLSTT*TLPDPP
Trigger: CGGCGGATCCGGAAGTGTCAACGTGGTCGAGAGCAG...ACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAACTATCATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp TCATTGAAAGTTAGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCATTCTCCATGGTCTTCTaGCTGTTTCCTTCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: SLKVRPQETPVLALLVCAFSMVF*LFPSFP
Trigger: AGGGAAGGAAGGAAACAGCAAGAAGACCATGGAGAA...TGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCTAACTTTCAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp TCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTAGGCCACAGGAGACTACTGCATGTCTTTGCTaGCATGGACTTCCTTCCCCT +
Preference number: 5 (lower is better)
Translates to: SKCEQHPVPSLKVRPQETTACLC*HGLPSP
Trigger: AGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGT...AGTCTCCTGTGGCCTAACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp TCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTAGGCCACAGGAGACTTCTCCTGAACTGGCCTaGAAATCCTATCCTGACCTG +
Preference number: 5 (lower is better)
Translates to: SKCEQHPVPSLKVRPQETSPELA*KSYPDL
Trigger: CAGGTCAGGATAGGATTTCAAGGCCAGTTCAGGAGA...AGTCTCCTGTGGCCTAACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CAA 90 bp ATACCAAAGAGTCCTGTGAGGAAGGTGGGTAAAAACTGGTGTTGTGCTTTGATACTTGAGGCCAGCAGTTaGAGACCAGCCTGGGGAACA +
Preference number: 5 (lower is better)
Translates to: IPKSPVRKVGKNWCCALILEASS*RPAWGT
Trigger: TGTTCCCCAGGCTGGTCTCAAACTGCTGGCCTCAAG...TATCAAAGCACAACACCAGTTTTTACCCACCTTCCTCACAGGACTCTTTGGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR CAA 90 bp AAGAATCCACACCAACGAGGGCAGGGATCAAGAAGAACTAAAGTAAGTATCAGGCTTGAGGCCAGGAGTTaGAGAGCAGCCTGGCTAACA +
Preference number: 5 (lower is better)
Translates to: KNPHQRGQGSRRTKVSIRLEARS*RAAWLT
Trigger: TGTTAGCCAGGCTGCTCTCAAACTCCTGGCCTCAAG...CCTGATACTTACTTTAGTTCTTCTTGATCCCTGCCCTCGTTGGTGTGGATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS TCA 90 bp CTGATGAGCCCGGAGCAGGGCGGTCCTCCGATACATATAGTCCTCTaGTTTGATCACATACACCATCTTGTAGGAATTCAGCTTGAATCT +
Preference number: 5 (lower is better)
Translates to: LMSPEQGGPPIHIVL*FDHIHHLVGIQLES
Trigger: AGATTCAAGCTGAATTCCTACAAGATGGTGTATGTGATCAAATCAGAGGACTATATGTATCGGAGGACCGCCCTGCTCCGGGCTCATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
ENST00000566640.1
CDS-3UTR CAA 90 bp TGGGAAAAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCAGATCGGGGTGGCCTTaGAATAGCTGGGACACACGA +
Preference number: 5 (lower is better)
Translates to: WEKFQLQLCKVFMFLTGSRSGWP*NSWDTR
Trigger: TCGTGTGTCCCAGCTATTCAAAGGCCACCCCGATCT...GCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTTTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AACCTGCTGCTGCATATAATACAGGTTGGGTTTAGAGCTTGGAGCTCAGATGTCGGGGGCAAGAAGGTGTaGAATCCCATTATCAGATCG +
Preference number: 5 (lower is better)
Translates to: NLLLHIIQVGFRAWSSDVGGKKV*NPIIRS
Trigger: CGATCTGATAATGGGATTCAACACCTTCTTGCCCCC...GACATCTGAGCTCCAAGCTCTAAACCCAACCTGTATTATATGCAGCAGCAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CAA 90 bp ATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCCATCATGTTGGGGTGGTGGTaGAGGCTGTGGCTGGATGCC +
Preference number: 5 (lower is better)
Translates to: IHLSIKSFSSLFCKCISIMLGWW*RLWLDA
Trigger: GGCATCCAGCCACAGCCTCAACCACCACCCCAACAT...GATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp GTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGATTAAACTCCACAGGTaGATTGTTCTGCAAGGATGG +
Preference number: 5 (lower is better)
Translates to: VCASKLHVFACMDFLPLQIKLHR*IVLQGW
Trigger: CCATCCTTGCAGAACAATCAACCTGTGGAGTTTAAT...CTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp CAAGTCAGACACTGCCCCAGCTTTGCCCTAAAATCTCATCCCACAAAGCTCTTTCTGTGGCTCGCTCCTTaGGATAAGTTTCCAGATGTA +
Preference number: 5 (lower is better)
Translates to: QVRHCPSFALKSHPTKLFLWLAP*DKFPDV
Trigger: TACATCTGGAAACTTATCCAAAGGAGCGAGCCACAG...AAAGAGCTTTGTGGGATGAGATTTTAGGGCAAAGCTGGGGCAGTGTCTGACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CAA 90 bp TGGGAAAAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCGTGCCCCCAAGGGTGTaGTCCAAGCGAAATTTGGCT +
Preference number: 5 (lower is better)
Translates to: WEKFQLQLCKVFMFLTGSVPPRV*SKRNLA
Trigger: AGCCAAATTTCGCTTGGACAACACCCTTGGGGGCAC...GCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTTTTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AAAAGGACAACTGATTTGAACTCGTTGAGGTTGAGAACCAGAGGAGAGAAAAGGCTGCCCCCAACACCATaGTGCTTCTTAACTGCCCCT +
Preference number: 5 (lower is better)
Translates to: KRTTDLNSLRLRTRGEKRLPPTP*CFLTAP
Trigger: AGGGGCAGTTAAGAAGCACAATGGTGTTGGGGGCAG...CCTTTTCTCTCCTCTGGTTCTCAACCTCAACGAGTTCAAATCAGTTGTCCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCCCACTTCTGCCCCCAACACCATaGTGCTTCTTAACTGCCCCT +
Preference number: 5 (lower is better)
Translates to: KFQLQLCKVFMFLTGSPLLPPTP*CFLTAP
Trigger: AGGGGCAGTTAAGAAGCACAATGGTGTTGGGGGCAG...AAGTGGGCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AAAATTGTGTGTGTGTGTGCGTGTGTGTGTCAGAGAGTAAAGCTGGTGGATGGCTTACTAAACAGTAACTaGGACTTAGGGGGACTGCCC +
Preference number: 5 (lower is better)
Translates to: KIVCVCACVCQRVKLVDGLLNSN*DLGGLP
Trigger: GGGCAGTCCCCCTAAGTCCAAGTTACTGTTTAGTAA...GCCATCCACCAGCTTTACTCTCTGACACACACACGCACACACACACACAATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp CTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCTTATCTGCTCTGGCTTaGCAGTTAAGGGGCTTTGAA +
Preference number: 5 (lower is better)
Translates to: LCWCVQANCMSLLAWTSFLSALA*QLRGFE
Trigger: TTCAAAGCCCCTTAACTGCAAAGCCAGAGCAGATAA...GAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp GTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGTATACCCAAAACCCTTaGGGAAAAGTTCCAGCTTCA +
Preference number: 5 (lower is better)
Translates to: VCASKLHVFACMDFLPLQYTQNP*GKVPAS
Trigger: TGAAGCTGGAACTTTTCCCAAAGGGTTTTGGGTATA...CTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp TCATTGAAAGTTAGGCCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAACTGATTTGAACTCGTaGAGGTTGAGAACCAGAGGA +
Preference number: 5 (lower is better)
Translates to: SLKVRPQETPVLALLVCATDLNS*RLRTRG
Trigger: TCCTCTGGTTCTCAACCTCAACGAGTTCAAATCAGT...TGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGGCCTAACTTTCAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp CCACAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCAAAAGGACAACTGATTaGAACTCGTTGAGGTTGAGA +
Preference number: 5 (lower is better)
Translates to: PQETPVLALLVCASKLHVKRTTD*NSLRLR
Trigger: TCTCAACCTCAACGAGTTCAAATCAGTTGTCCTTTT...GACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS TCA 90 bp CTCTGCGGCTTGTTGTTCAGTTGGGGCTTCTTGACAGTGCCTCCATaGTCATTTCTCACAGAATCAACCTTCTCAGCAGTTGTTTTGCTT +
Preference number: 5 (lower is better)
Translates to: LCGLLFSWGFLTVPP*SFLTESTFSAVVLL
Trigger: AAGCAAAACAACTGCTGAGAAGGTTGATTCTGTGAGAAATGATCATGGAGGCACTGTCAAGAAGCCCCAACTGAACAACAAGCCGCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS TCA 90 bp CAGCTGCTTTATCAGCATATATCCTCTGGAGTGCTTTTCTATGGATaGCTTCTGATGTGCCCCCAAGGGTGTTGTCCAAGCGAAATTTGG +
Preference number: 5 (lower is better)
Translates to: QLLYQHISSGVLFYG*LLMCPQGCCPSEIW
Trigger: CCAAATTTCGCTTGGACAACACCCTTGGGGGCACATCAGAAGTCATCCATAGAAAAGCACTCCAGAGGATATATGCTGATAAAGCAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS CCA 90 bp CTCAGACCATCAATGATGTCAGCTGCTTTATCAGCATATATCCTCTaGAGTGCTTTTCTATGGATGACTTCTGATGTGCCCCCAAGGGTG +
Preference number: 5 (lower is better)
Translates to: LRPSMMSAALSAYIL*SAFLWMTSDVPPRV
Trigger: CACCCTTGGGGGCACATCAGAAGTCATCCATAGAAAAGCACTCCAGAGGATATATGCTGATAAAGCAGCTGACATCATTGATGGTCTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp CTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCTTTGTAGATGTCTGGTaGGCCCTGAAATCTGTTCTT +
Preference number: 5 (lower is better)
Translates to: LCWCVQANCMSLLAWTSFFVDVW*ALKSVL
Trigger: AAGAACAGATTTCAGGGCCAACCAGACATCTACAAA...GAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp TCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTAGGCCACAGGAGACTTTCTCAGCAGTTGTTTaGCTTAAAAGCACGGAGCTG +
Preference number: 5 (lower is better)
Translates to: SKCEQHPVPSLKVRPQETFSAVV*LKSTEL
Trigger: CAGCTCCGTGCTTTTAAGCAAAACAACTGCTGAGAA...AGTCTCCTGTGGCCTAACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp ACCATGATAGTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTGGCCTCTGCGGCTTGTaGTTCAGTTGGGGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: TMIVPIHLSIKSFSSLFCGLCGL*FSWGFL
Trigger: CAAGAAGCCCCAACTGAACAACAAGCCGCAGAGGCC...ACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAACTATCATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AGCAAACATAAAACACACAGAACATTGCTGGTTACAACTAAGACTTGCGTAATGCTGGGCCTCTGCGGCTaGTTGTTCAGTTGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: SKHKTHRTLLVTTKTCVMLGLCG*LFSWGF
Trigger: GAAGCCCCAACTGAACAACAAGCCGCAGAGGCCCAG...CATTACGCAAGTCTTAGTTGTAACCAGCAATGTTCTGTGTGTTTTATGTTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CAA 90 bp CTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCGGATTGTTGCCAGATaGGTCTCTAAAACTACATCA +
Preference number: 5 (lower is better)
Translates to: LCWCVQANCMSLLAWTSFRIVAR*VSKTTS
Trigger: TGATGTAGTTTTAGAGACCAATCTGGCAACAATCCG...GAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp TGCATCTCCATCCAGTCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTCCAGAACCCGGATTGTaGCCAGATTGGTCTCTAAAA +
Preference number: 5 (lower is better)
Translates to: CISIQSKCEQHPVPSLKVPEPGL*PDWSLK
Trigger: TTTTAGAGACCAATCTGGCAACAATCCGGGTTCTGG...AACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGACTGGATGGAGATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AAAATTGTGTGTGTGTGTGCGTGTGTGTGTCAGAGAGTAAAGCTGGTGGATGGCAAAGCTTCTTCTGTATaGCTTCCAGAACCCGGATTG +
Preference number: 5 (lower is better)
Translates to: KIVCVCACVCQRVKLVDGKASSV*LPEPGL
Trigger: CAATCCGGGTTCTGGAAGCAATACAGAAGAAGCTTT...GCCATCCACCAGCTTTACTCTCTGACACACACACGCACACACACACACAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp TGCATCTCCATCCAGTCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTCAAGCGAAATTTGGCTaGTTCTTCAGCAGACAAGCG +
Preference number: 5 (lower is better)
Translates to: CISIQSKCEQHPVPSLKVQAKFG*FFSRQA
Trigger: CGCTTGTCTGCTGAAGAACAAGCCAAATTTCGCTTG...AACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGACTGGATGGAGATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp ATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCCATCGCAGGGCTGTCACTCTaGTCTCGCTTTATGCCCAGC +
Preference number: 5 (lower is better)
Translates to: IHLSIKSFSSLFCKCISIAGLSL*SRFMPS
Trigger: GCTGGGCATAAAGCGAGACAAGAGTGACAGCCCTGC...GATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AAAATTGTGTGTGTGTGTGCGTGTGTGTGTCAGAGAGTAAAGCTGGTGGATGGCATGCTCTGGATCAGTTaGTCCATGGTAAAGGCAATG +
Preference number: 5 (lower is better)
Translates to: KIVCVCACVCQRVKLVDGMLWIS*SMVKAM
Trigger: CATTGCCTTTACCATGGACAAACTGATCCAGAGCAT...GCCATCCACCAGCTTTACTCTCTGACACACACACGCACACACACACACAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp GTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGGGAATACTGTGCCGTATTaGACACGATACTTGTTAATG +
Preference number: 5 (lower is better)
Translates to: VCKQTACLCLHGLPSPPGNTVPY*TRYLLM
Trigger: CATTAACAAGTATCGTGTCAAATACGGCACAGTATT...CCCTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AAAATTGTGTGTGTGTGTGCGTGTGTGTGTCAGAGAGTAAAGCTGGTGGATGGCACTGATTTGAACTCGTaGAGGTTGAGAACCAGAGGA +
Preference number: 5 (lower is better)
Translates to: KIVCVCACVCQRVKLVDGTDLNS*RLRTRG
Trigger: TCCTCTGGTTCTCAACCTCAACGAGTTCAAATCAGT...GCCATCCACCAGCTTTACTCTCTGACACACACACGCACACACACACACAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp GTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCCCCTCCAGAAAAGGACAACTGATTaGAACTCGTTGAGGTTGAGA +
Preference number: 5 (lower is better)
Translates to: VCASKLHVFACMDFLPLQKRTTD*NSLRLR
Trigger: TCTCAACCTCAACGAGTTCAAATCAGTTGTCCTTTT...CTGGAGGGGAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AACCTGCTGCTGCATATAATACAGGTTGGGTTTAGAGCTTGGAGCTCAGATGTCTTACTCTTTTGTTGGTaGCACTGGTGGGTTGGGACT +
Preference number: 5 (lower is better)
Translates to: NLLLHIIQVGFRAWSSDVLLFCW*HWWVGT
Trigger: AGTCCCAACCCACCAGTGCAACCAACAAAAGAGTAA...GACATCTGAGCTCCAAGCTCTAAACCCAACCTGTATTATATGCAGCAGCAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CAA 90 bp CAATTTACTGTACTAACCTGTAGCCAATCATATATGTGCTCAATAGAGAGTTCAGGGGCTGCACCGCTGTaGGGTGATGATGGCTGCTAT +
Preference number: 5 (lower is better)
Translates to: QFTVLTCSQSYMCSIESSGAAPL*GDDGCY
Trigger: ATAGCAGCCATCATCACCCAACAGCGGTGCAGCCCC...TGAACTCTCTATTGAGCACATATATGATTGGCTACAGGTTAGTACAGTAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR CAA 90 bp ATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCCATCAGATCGGGGTGGCCTTaGAATAGCTGGGACACACGA +
Preference number: 5 (lower is better)
Translates to: IHLSIKSFSSLFCKCISIRSGWP*NSWDTR
Trigger: TCGTGTGTCCCAGCTATTCAAAGGCCACCCCGATCT...GATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp TGCATCTCCATCCAGTCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTTTCTCAGCAGTTGTTTaGCTTAAAAGCACGGAGCTG +
Preference number: 5 (lower is better)
Translates to: CISIQSKCEQHPVPSLKVFSAVV*LKSTEL
Trigger: CAGCTCCGTGCTTTTAAGCAAAACAACTGCTGAGAA...AACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGACTGGATGGAGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp GTACATCTGTTCATAGGTACTAAATCTGAAGCCACAGTACTATGGTACACAAGACGGCTTGTTGTTCAGTaGGGGCTTCTTGACAGTGCC +
Preference number: 5 (lower is better)
Translates to: VHLFIGTKSEATVLWYTRRLVVQ*GLLDSA
Trigger: GGCACTGTCAAGAAGCCCCAACTGAACAACAAGCCG...TCTTGTGTACCATAGTACTGTGGCTTCAGATTTAGTACCTATGAACAGATGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360439.8
ENST00000394947.8
CDS-3UTR CAA 90 bp ATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCCATCCGGCTTGTTGTTCAGTaGGGGCTTCTTGACAGTGCC +
Preference number: 5 (lower is better)
Translates to: IHLSIKSFSSLFCKCISIRLVVQ*GLLDSA
Trigger: GGCACTGTCAAGAAGCCCCAACTGAACAACAAGCCG...GATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp TGCATCTCCATCCAGTCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTTTGTCCAAGCGAAATTaGGCTTGTTCTTCAGCAGAC +
Preference number: 5 (lower is better)
Translates to: CISIQSKCEQHPVPSLKVLSKRN*ACSSAD
Trigger: GTCTGCTGAAGAACAAGCCAAATTTCGCTTGGACAA...AACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGACTGGATGGAGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp TGGGAAAAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCCTCCGTAGCCTGCTCTaGCCTCTCATCATAGATACT +
Preference number: 5 (lower is better)
Translates to: WEKFQLQLCKVFMFLTGSLRSLL*PLIIDT
Trigger: AGTATCTATGATGAGAGGCAAGAGCAGGCTACGGAG...GCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTTTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp GTACATCTGTTCATAGGTACTAAATCTGAAGCCACAGTACTATGGTACACAAGATGTGATGAGTCTATGTaGCCATCCAGCAGGCTCCGC +
Preference number: 5 (lower is better)
Translates to: VHLFIGTKSEATVLWYTRCDESM*PSSRLR
Trigger: GCGGAGCCTGCTGGATGGCAACATAGACTCATCACA...TCTTGTGTACCATAGTACTGTGGCTTCAGATTTAGTACCTATGAACAGATGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360439.8
ENST00000394947.8
CDS-3UTR CAA 90 bp ACCATGATAGTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTCGGGGCACATGCTCCTaGGTCCATTTATCTACCCAG +
Preference number: 5 (lower is better)
Translates to: TMIVPIHLSIKSFSSLFCRGTCS*VHLSTQ
Trigger: CTGGGTAGATAAATGGACCAAGGAGCATGTGCCCCG...ACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAACTATCATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp TGCATCTCCATCCAGTCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTTTATCTGCTCTGGCTTaGCAGTTAAGGGGCTTTGAA +
Preference number: 5 (lower is better)
Translates to: CISIQSKCEQHPVPSLKVLSALA*QLRGFE
Trigger: TTCAAAGCCCCTTAACTGCAAAGCCAGAGCAGATAA...AACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGACTGGATGGAGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp GTTTCTACCCTGGATAAGGAACTGAAGTCAAAATCCCTGCTTCACAGTATTTTCCATCCGGTTCCCTCATaGAAAGTTAGGCCACAGGAG +
Preference number: 5 (lower is better)
Translates to: VSTLDKELKSKSLLHSIFHPVPS*KVRPQE
Trigger: CTCCTGTGGCCTAACTTTCAATGAGGGAACCGGATG...GAAAATACTGTGAAGCAGGGATTTTGACTTCAGTTCCTTATCCAGGGTAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CAA 90 bp GACAAGGGACGTGGGTTGAGAGTTTATTCCTTAAGTAAGAACCAAGCTTTATTTGGTTGCACTGGTGGGTaGGGACTTTCTCCTGAACTG +
Preference number: 5 (lower is better)
Translates to: DKGRGLRVYSLSKNQALFGCTGG*GLSPEL
Trigger: CAGTTCAGGAGAAAGTCCCAACCCACCAGTGCAACC...AAATAAAGCTTGGTTCTTACTTAAGGAATAAACTCTCAACCCACGTCCCTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CAA 90 bp AACCTGCTGCTGCATATAATACAGGTTGGGTTTAGAGCTTGGAGCTCAGATGTCAAACTTACTCTTTTGTaGGTTGCACTGGTGGGTTGG +
Preference number: 5 (lower is better)
Translates to: NLLLHIIQVGFRAWSSDVKLTLL*VALVGW
Trigger: CCAACCCACCAGTGCAACCAACAAAAGAGTAAGTTT...GACATCTGAGCTCCAAGCTCTAAACCCAACCTGTATTATATGCAGCAGCAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CAA 90 bp AAGAATCCACACCAACGAGGGCAGGGATCAAGAAGAACTAAAGTAAGTATCAGGGATTTAAGGAAGCACTaGGGGAGACCCTTAGACTCT +
Preference number: 5 (lower is better)
Translates to: KNPHQRGQGSRRTKVSIRDLRKH*GRPLDS
Trigger: AGAGTCTAAGGGTCTCCCCAAGTGCTTCCTTAAATC...CCTGATACTTACTTTAGTTCTTCTTGATCCCTGCCCTCGTTGGTGTGGATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR CAA 90 bp CCTAACTCTATCTATGACTCACTCTATAACCCCAAATCCAAAACCTTTCCTTGTAGGCATAAGAATCACTaGAACCCAGGCAGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: PNSIYDSLYNPKSKTFPCRHKNH*NPGRGG
Trigger: CCCTCCCCTGCCTGGGTTCAAGTGATTCTTATGCCT...ACAAGGAAAGGTTTTGGATTTGGGGTTATAGAGTGAGTCATAGATAGAGTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS TCA 90 bp TTTATCAGCATATATCCTCTGGAGTGCTTTTCTATGGATGACTTCTaGTGTGCCCCCAAGGGTGTTGTCCAAGCGAAATTTGGCTTGTTC +
Preference number: 5 (lower is better)
Translates to: FISIYPLECFSMDDF*CAPKGVVQAKFGLF
Trigger: GAACAAGCCAAATTTCGCTTGGACAACACCCTTGGGGGCACATCAGAAGTCATCCATAGAAAAGCACTCCAGAGGATATATGCTGATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS CCA 90 bp AGCATAATCTATCTCCATAGCAATGCCCTCTGTGGCTCGCTCCTTTaGATAAGTTTCCAGATGTACAGACTCCTTATAGCCCAGAAAGTT +
Preference number: 5 (lower is better)
Translates to: SIIYLHSNALCGSLL*ISFQMYRLLIAQKV
Trigger: AACTTTCTGGGCTATAAGGAGTCTGTACATCTGGAAACTTATCCAAAGGAGCGAGCCACAGAGGGCATTGCTATGGAGATAGATTATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AAAATTGTGTGTGTGTGTGCGTGTGTGTGTCAGAGAGTAAAGCTGGTGGATGGCACATTCACCATGTCATaGGTTTGCACCTCAATTTTG +
Preference number: 5 (lower is better)
Translates to: KIVCVCACVCQRVKLVDGTFTMS*VCTSIL
Trigger: CAAAATTGAGGTGCAAACCAATGACATGGTGAATGT...GCCATCCACCAGCTTTACTCTCTGACACACACACGCACACACACACACAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp CAGGCTGTAGGTAAAACTTACTCTTTTGTTGGTTGCACTGGTGGGTTGGGACTTGAAGAATCCTTCAGATaGAGCAGTTTGGGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: QAVGKTYSFVGCTGGLGLEESFR*SSLGFF
Trigger: GAAGAAACCCAAACTGCTCAATCTGAAGGATTCTTC...AAGTCCCAACCCACCAGTGCAACCAACAAAAGAGTAAGTTTTACCTACAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CAA 90 bp AAAATTGTGTGTGTGTGTGCGTGTGTGTGTCAGAGAGTAAAGCTGGTGGATGGCATACTCTCAATCTCATaGAGTAAGCTCTTAGACCTC +
Preference number: 5 (lower is better)
Translates to: KIVCVCACVCQRVKLVDGILSIS*SKLLDL
Trigger: GAGGTCTAAGAGCTTACTCAATGAGATTGAGAGTAT...GCCATCCACCAGCTTTACTCTCTGACACACACACGCACACACACACACAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AAAATTGTGTGTGTGTGTGCGTGTGTGTGTCAGAGAGTAAAGCTGGTGGATGGCTCTTCCAGTATTTGTTaGTCTTCATACGCAAGTGAG +
Preference number: 5 (lower is better)
Translates to: KIVCVCACVCQRVKLVDGSSSIC*SSYASE
Trigger: CTCACTTGCGTATGAAGACAAACAAATACTGGAAGA...GCCATCCACCAGCTTTACTCTCTGACACACACACGCACACACACACACAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp TCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTAGGCCACAGGAGACTAGCATCTTCCAGTATTaGTTTGTCTTCATACGCAAG +
Preference number: 5 (lower is better)
Translates to: SKCEQHPVPSLKVRPQETSIFQY*FVFIRK
Trigger: CTTGCGTATGAAGACAAACAAATACTGGAAGATGCT...AGTCTCCTGTGGCCTAACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp CTAAAATCTCATCCCACAAAGCTCTTTTTGGCACCCTACACTTTGGCTCACAGTGTTTTCTTCTTCAATTaGCCGTTCGGCTTGGGAACA +
Preference number: 5 (lower is better)
Translates to: LKSHPTKLFLAPYTLAHSVFFFN*PFGLGT
Trigger: TGTTCCCAAGCCGAACGGCAAATTGAAGAAGAAAAC...ACTGTGAGCCAAAGTGTAGGGTGCCAAAAAGAGCTTTGTGGGATGAGATTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CAA 90 bp CTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCCATCCAGTCACAGCTGGACCTGGCCTaGGCTCTGAATAAACATAAG +
Preference number: 5 (lower is better)
Translates to: LSIKSFSSLFCKCISIQSQLDLA*ALNKHK
Trigger: CTTATGTTTATTCAGAGCCAAGGCCAGGTCCAGCTG...TGACTGGATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp CTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTGCTTGCATGGACTTCCTTCAAAAACAAGTTAAAATaGTGTGTGTGTGTGCGTGTG +
Preference number: 5 (lower is better)
Translates to: LCWCVQANCMSLLAWTSFKNKLK*CVCVRV
Trigger: CACACGCACACACACACACAATTTTAACTTGTTTTT...GAAGGAAGTCCATGCAAGCAAAGACATGCAGTTTGCTTGCACACACCAGCAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp CAGGAGACTCCAGTCTTAGCTCTGCTGGTGTGTGCAAGCAAACTGCATGTCTTTAAAAACAAGTTAAAATaGTGTGTGTGTGTGCGTGTG +
Preference number: 5 (lower is better)
Translates to: QETPVLALLVCASKLHVFKNKLK*CVCVRV
Trigger: CACACGCACACACACACACAATTTTAACTTGTTTTT...AAAGACATGCAGTTTGCTTGCACACACCAGCAGAGCTAAGACTGGAGTCTCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp GACAAGGGACGTGGGTTGAGAGTTTATTCCTTAAGTAAGAACCAAGCTTTATTTCTGGGAGGGGCTCAGTaGGTCTTTGTTCAGAAAGTC +
Preference number: 5 (lower is better)
Translates to: DKGRGLRVYSLSKNQALFLGGAQ*VFVQKV
Trigger: GACTTTCTGAACAAAGACCAACTGAGCCCCTCCCAG...AAATAAAGCTTGGTTCTTACTTAAGGAATAAACTCTCAACCCACGTCCCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CAA 90 bp GTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCCTTCCAGAACCCGGATaGTTGCCAGATTGGTCTCTA +
Preference number: 5 (lower is better)
Translates to: VPIHLSIKSFSSLFCKCILPEPG*LPDWSL
Trigger: TAGAGACCAATCTGGCAACAATCCGGGTTCTGGAAG...GATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp ATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCCATCCTTCCAGAACCCGGATaGTTGCCAGATTGGTCTCTA +
Preference number: 5 (lower is better)
Translates to: IHLSIKSFSSLFCKCISILPEPG*LPDWSL
Trigger: TAGAGACCAATCTGGCAACAATCCGGGTTCTGGAAG...GATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCCCACTTTTGAACTCGTTGAGGTaGAGAACCAGAGGAGAGAAA +
Preference number: 5 (lower is better)
Translates to: KFQLQLCKVFMFLTGSPLLNSLR*RTRGEK
Trigger: TTTCTCTCCTCTGGTTCTCAACCTCAACGAGTTCAA...AAGTGGGCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AAAAGGACAACTGATTTGAACTCGTTGAGGTTGAGAACCAGAGGAGAGAAAAGGTTGAACTCGTTGAGGTaGAGAACCAGAGGAGAGAAA +
Preference number: 5 (lower is better)
Translates to: KRTTDLNSLRLRTRGEKRLNSLR*RTRGEK
Trigger: TTTCTCTCCTCTGGTTCTCAACCTCAACGAGTTCAA...CCTTTTCTCTCCTCTGGTTCTCAACCTCAACGAGTTCAAATCAGTTGTCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCCCACTTACTGATTTGAACTCGTaGAGGTTGAGAACCAGAGGA +
Preference number: 5 (lower is better)
Translates to: KFQLQLCKVFMFLTGSPLTDLNS*RLRTRG
Trigger: TCCTCTGGTTCTCAACCTCAACGAGTTCAAATCAGT...AAGTGGGCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AAGAATCCACACCAACGAGGGCAGGGATCAAGAAGAACTAAAGTAAGTATCAGGATCCAAAACCTTTCCTaGTTTCCTTGCCAGTTTCCA +
Preference number: 5 (lower is better)
Translates to: KNPHQRGQGSRRTKVSIRIQNLS*FPCQFP
Trigger: TGGAAACTGGCAAGGAAACAAGGAAAGGTTTTGGAT...CCTGATACTTACTTTAGTTCTTCTTGATCCCTGCCCTCGTTGGTGTGGATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS GCA 90 bp AACAGCAATGGAGGGATTCTTTCTCAGACCATCAATGATGTCAGCTaGTTTATCAGCATATATCCTCTGGAGTGCTTTTCTATGGATGAC +
Preference number: 5 (lower is better)
Translates to: NSNGGILSQTINDVS*FISIYPLECFSMDD
Trigger: GTCATCCATAGAAAAGCACTCCAGAGGATATATGCTGATAAAGCAGCTGACATCATTGATGGTCTGAGAAAGAATCCCTCCATTGCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp TGGGAAAAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCATTAAACTCCACAGGTaGATTGTTCTGCAAGGATGG +
Preference number: 5 (lower is better)
Translates to: WEKFQLQLCKVFMFLTGSIKLHR*IVLQGW
Trigger: CCATCCTTGCAGAACAATCAACCTGTGGAGTTTAAT...GCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTTTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCCCACTTTTTGTAGATGTCTGGTaGGCCCTGAAATCTGTTCTT +
Preference number: 5 (lower is better)
Translates to: KFQLQLCKVFMFLTGSPLFVDVW*ALKSVL
Trigger: AAGAACAGATTTCAGGGCCAACCAGACATCTACAAA...AAGTGGGCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp CTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCCATCCAGTCAAAAGCTTCTTCTGTATaGCTTCCAGAACCCGGATTG +
Preference number: 5 (lower is better)
Translates to: LSIKSFSSLFCKCISIQSKASSV*LPEPGL
Trigger: CAATCCGGGTTCTGGAAGCAATACAGAAGAAGCTTT...TGACTGGATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp ACCATGATAGTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTCAAGCGAAATTTGGCTaGTTCTTCAGCAGACAAGCG +
Preference number: 5 (lower is better)
Translates to: TMIVPIHLSIKSFSSLFCQAKFG*FFSRQA
Trigger: CGCTTGTCTGCTGAAGAACAAGCCAAATTTCGCTTG...ACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAACTATCATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp GACAAGGGACGTGGGTTGAGAGTTTATTCCTTAAGTAAGAACCAAGCTTTATTTTTACTAAACAGTAACTaGGACTTAGGGGGACTGCCC +
Preference number: 5 (lower is better)
Translates to: DKGRGLRVYSLSKNQALFLLNSN*DLGGLP
Trigger: GGGCAGTCCCCCTAAGTCCAAGTTACTGTTTAGTAA...AAATAAAGCTTGGTTCTTACTTAAGGAATAAACTCTCAACCCACGTCCCTTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CAA 90 bp ATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCCATCTTCTCCATGGTCTTCTaGCTGTTTCCTTCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: IHLSIKSFSSLFCKCISIFSMVF*LFPSFP
Trigger: AGGGAAGGAAGGAAACAGCAAGAAGACCATGGAGAA...GATGGAGATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp TGCATCTCCATCCAGTCAAAGTGTGAACAGCATCCGGTTCCCTCATTGAAAGTTAATACTGTGCCGTATTaGACACGATACTTGTTAATG +
Preference number: 5 (lower is better)
Translates to: CISIQSKCEQHPVPSLKVNTVPY*TRYLLM
Trigger: CATTAACAAGTATCGTGTCAAATACGGCACAGTATT...AACTTTCAATGAGGGAACCGGATGCTGTTCACACTTTGACTGGATGGAGATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCCCACTTACATTCACCATGTCATaGGTTTGCACCTCAATTTTG +
Preference number: 5 (lower is better)
Translates to: KFQLQLCKVFMFLTGSPLTFTMS*VCTSIL
Trigger: CAAAATTGAGGTGCAAACCAATGACATGGTGAATGT...AAGTGGGCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AGCAAACATAAAACACACAGAACATTGCTGGTTACAACTAAGACTTGCGTAATGAAAAGCACGGAGCTGTaGGCATCTGGTAGGAATTGT +
Preference number: 5 (lower is better)
Translates to: SKHKTHRTLLVTTKTCVMKSTEL*ASGRNC
Trigger: ACAATTCCTACCAGATGCCAACAGCTCCGTGCTTTT...CATTACGCAAGTCTTAGTTGTAACCAGCAATGTTCTGTGTGTTTTATGTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CAA 90 bp GTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCAAAGCTTCTTCTGTATaGCTTCCAGAACCCGGATTG +
Preference number: 5 (lower is better)
Translates to: VPIHLSIKSFSSLFCKCIKASSV*LPEPGL
Trigger: CAATCCGGGTTCTGGAAGCAATACAGAAGAAGCTTT...GATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp GTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCTCATTCTGTTTAAAGTaGATCCCCTGGTGGTCCAGA +
Preference number: 5 (lower is better)
Translates to: VPIHLSIKSFSSLFCKCISFCLK*IPWWSR
Trigger: TCTGGACCACCAGGGGATCAACTTTAAACAGAATGA...GATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AAAAGGACAACTGATTTGAACTCGTTGAGGTTGAGAACCAGAGGAGAGAAAAGGATACTCTCAATCTCATaGAGTAAGCTCTTAGACCTC +
Preference number: 5 (lower is better)
Translates to: KRTTDLNSLRLRTRGEKRILSIS*SKLLDL
Trigger: GAGGTCTAAGAGCTTACTCAATGAGATTGAGAGTAT...CCTTTTCTCTCCTCTGGTTCTCAACCTCAACGAGTTCAAATCAGTTGTCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AAGTTCCAGCTTCAGCTTTGTAAGGTATTCATGTTCCTAACAGGTAGCCCACTTATACTCTCAATCTCATaGAGTAAGCTCTTAGACCTC +
Preference number: 5 (lower is better)
Translates to: KFQLQLCKVFMFLTGSPLILSIS*SKLLDL
Trigger: GAGGTCTAAGAGCTTACTCAATGAGATTGAGAGTAT...AAGTGGGCTACCTGTTAGGAACATGAATACCTTACAAAGCTGAAGCTGGAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AAAAGGACAACTGATTTGAACTCGTTGAGGTTGAGAACCAGAGGAGAGAAAAGGTCTTCCAGTATTTGTTaGTCTTCATACGCAAGTGAG +
Preference number: 5 (lower is better)
Translates to: KRTTDLNSLRLRTRGEKRSSSIC*SSYASE
Trigger: CTCACTTGCGTATGAAGACAAACAAATACTGGAAGA...CCTTTTCTCTCCTCTGGTTCTCAACCTCAACGAGTTCAAATCAGTTGTCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp ACCATGATAGTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTATGCTCTGGATCAGTTaGTCCATGGTAAAGGCAATG +
Preference number: 5 (lower is better)
Translates to: TMIVPIHLSIKSFSSLFCMLWIS*SMVKAM
Trigger: CATTGCCTTTACCATGGACAAACTGATCCAGAGCAT...ACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAACTATCATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp AAGAATCCACACCAACGAGGGCAGGGATCAAGAAGAACTAAAGTAAGTATCAGGACAGTCCACAAACATTaGAGTATATTCTTCTCTGGA +
Preference number: 5 (lower is better)
Translates to: KNPHQRGQGSRRTKVSIRTVHKH*SIFFSG
Trigger: TCCAGAGAAGAATATACTCAAATGTTTGTGGACTGT...CCTGATACTTACTTTAGTTCTTCTTGATCCCTGCCCTCGTTGGTGTGGATTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR CAA 90 bp AGCAAACATAAAACACACAGAACATTGCTGGTTACAACTAAGACTTGCGTAATGTTCTCAGCAGTTGTTTaGCTTAAAAGCACGGAGCTG +
Preference number: 5 (lower is better)
Translates to: SKHKTHRTLLVTTKTCVMFSAVV*LKSTEL
Trigger: CAGCTCCGTGCTTTTAAGCAAAACAACTGCTGAGAA...CATTACGCAAGTCTTAGTTGTAACCAGCAATGTTCTGTGTGTTTTATGTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CAA 90 bp ACCATGATAGTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTCGGATTGTTGCCAGATaGGTCTCTAAAACTACATCA +
Preference number: 5 (lower is better)
Translates to: TMIVPIHLSIKSFSSLFCRIVAR*VSKTTS
Trigger: TGATGTAGTTTTAGAGACCAATCTGGCAACAATCCG...ACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAACTATCATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp ATACCAAAGAGTCCTGTGAGGAAGGTGGGTAAAAACTGGTGTTGTGCTTTGATAAGAAGAAACAACTATTaGCTGCATATGGATATGTCC +
Preference number: 5 (lower is better)
Translates to: IPKSPVRKVGKNWCCALIRRNNY*LHMDMS
Trigger: GGACATATCCATATGCAGCAAATAGTTGTTTCTTCT...TATCAAAGCACAACACCAGTTTTTACCCACCTTCCTCACAGGACTCTTTGGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR CAA 90 bp ACCATGATAGTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAGCATCTTCCAGTATTaGTTTGTCTTCATACGCAAG +
Preference number: 5 (lower is better)
Translates to: TMIVPIHLSIKSFSSLFCSIFQY*FVFIRK
Trigger: CTTGCGTATGAAGACAAACAAATACTGGAAGATGCT...ACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAACTATCATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp CAATTTACTGTACTAACCTGTAGCCAATCATATATGTGCTCAATAGAGAGTTCACGTTCAAATCCCTTCTaGTCACCACCAATCTACCAA +
Preference number: 5 (lower is better)
Translates to: QFTVLTCSQSYMCSIESSRSNPF*SPPIYQ
Trigger: TTGGTAGATTGGTGGTGACAAGAAGGGATTTGAACG...TGAACTCTCTATTGAGCACATATATGATTGGCTACAGGTTAGTACAGTAAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR CAA 90 bp AGCAAACATAAAACACACAGAACATTGCTGGTTACAACTAAGACTTGCGTAATGACATTCACCATGTCATaGGTTTGCACCTCAATTTTG +
Preference number: 5 (lower is better)
Translates to: SKHKTHRTLLVTTKTCVMTFTMS*VCTSIL
Trigger: CAAAATTGAGGTGCAAACCAATGACATGGTGAATGT...CATTACGCAAGTCTTAGTTGTAACCAGCAATGTTCTGTGTGTTTTATGTTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394947.8
CDS-3UTR CAA 90 bp GTTCCAATCCATCTGAGTATTAAGTCCTTCTCCAGTCTGTTTTGTAAATGCATCAAAAACAAGTTAAAATaGTGTGTGTGTGTGCGTGTG +
Preference number: 5 (lower is better)
Translates to: VPIHLSIKSFSSLFCKCIKNKLK*CVCVRV
Trigger: CACACGCACACACACACACAATTTTAACTTGTTTTT...GATGCATTTACAAAACAGACTGGAGAAGGACTTAATACTCAGATGGATTGGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS-3UTR CAA 90 bp CCTAACTCTATCTATGACTCACTCTATAACCCCAAATCCAAAACCTTTCCTTGTTGTGCTTTGATAGGGTaGATTGAAAAAGGCTATAGA +
Preference number: 5 (lower is better)
Translates to: PNSIYDSLYNPKSKTFPCCALIG*IEKGYR
Trigger: TCTATAGCCTTTTTCAATCAACCCTATCAAAGCACA...ACAAGGAAAGGTTTTGGATTTGGGGTTATAGAGTGAGTCATAGATAGAGTTAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR CAA 90 bp CAATTTACTGTACTAACCTGTAGCCAATCATATATGTGCTCAATAGAGAGTTCACCTTTCCTTGTTTCCTaGCCAGTTTCCATAAAGCAA +
Preference number: 5 (lower is better)
Translates to: QFTVLTCSQSYMCSIESSPFLVS*PVSIKQ
Trigger: TTGCTTTATGGAAACTGGCAAGGAAACAAGGAAAGG...TGAACTCTCTATTGAGCACATATATGATTGGCTACAGGTTAGTACAGTAAATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR CAA 90 bp CAATTTACTGTACTAACCTGTAGCCAATCATATATGTGCTCAATAGAGAGTTCAATACAAAAATTAGGCTaGGTGGTGCATGCCTGTAAT +
Preference number: 5 (lower is better)
Translates to: QFTVLTCSQSYMCSIESSIQKLG*VVHACN
Trigger: ATTACAGGCATGCACCACCAAGCCTAATTTTTGTAT...TGAACTCTCTATTGAGCACATATATGATTGGCTACAGGTTAGTACAGTAAATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS-3UTR CAA 90 bp AGAAATCCTAACTCTATCTATGACTCACTCTATAACCCCAAATCCAAAACCTTTAACTGGTGTTGTGCTTaGATAGGGTTGATTGAAAAA +
Preference number: 5 (lower is better)
Translates to: RNPNSIYDSLYNPKSKTFNWCCA*IGLIEK
Trigger: TTTTTCAATCAACCCTATCAAAGCACAACACCAGTT...AAAGGTTTTGGATTTGGGGTTATAGAGTGAGTCATAGATAGAGTTAGGATTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567289.5
CDS CAA 90 bp GGGTTCCGGCACCGAATGCTGACTCGACCGCCACGGCCAGGGAGTTaGGAGACCCGGCAGCTCGCAGGGCTAGCGGCGAGGCGCAGGGGC +
Preference number: 6 (lower is better)
Translates to: GFRHRMLTRPPRPGS*ETRQLAGLAARRRG
Trigger: GCCCCTGCGCCTCGCCGCTAGCCCTGCGAGCTGCCGGGTCTCCAAACTCCCTGGCCGTGGCGGTCGAGTCAGCATTCGGTGCCGGAACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562776.5
CDS GCA 72 bp CCCGGCCCCCGGCCCAGCGTGCTCTCACCGCAAAGCTaGTTCGGCCGCTCGTCACTGCGTGTCCCTCTCAGC +
Preference number: 6 (lower is better)
Translates to: PGPRPSVLSPQS*FGRSSLRVPLS
Trigger: GCTGAGAGGGACACGCAGTGACGAGCGGCCGAAGCAGCTTTGCGGTGAGAGCACGCTGGGCCGGGGGCCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394949.8
CDS TCA 72 bp CTGGGTCGCGGCCTGACGGGTTCCGGCACCGAATGCTaGCTCGACCGCCACGGCCAGGGAGTTTGGAGACCC +
Preference number: 6 (lower is better)
Translates to: LGRGLTGSGTEC*LDRHGQGVWRP
Trigger: GGGTCTCCAAACTCCCTGGCCGTGGCGGTCGAGTCAGCATTCGGTGCCGGAACCCGTCAGGCCGCGACCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562776.5
CDS TCA 72 bp AAACCACCGATGCGAGCTCCTTGCTGGGTCGCGGCCTaGCGGGTTCCGGCACCGAATGCTGACTCGACCGCC +
Preference number: 6 (lower is better)
Translates to: KPPMRAPCWVAA*RVPAPNADSTA
Trigger: GGCGGTCGAGTCAGCATTCGGTGCCGGAACCCGTCAGGCCGCGACCCAGCAAGGAGCTCGCATCGGTGGTTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562776.5
CDS GCA 72 bp CAAGCACCCGGTGCTGGTGAGGAAAAGCCTCTGTGCTaGCAGGGATCCGACGCTGCTGGGCTGCATACACCG +
Preference number: 6 (lower is better)
Translates to: QAPGAGEEKPLC*QGSDAAGLHTP
Trigger: CGGTGTATGCAGCCCAGCAGCGTCGGATCCCTGGCAGCACAGAGGCTTTTCCTCACCAGCACCGGGTGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
ENST00000562776.5
ENST00000564778.5
ENST00000567289.5
ENST00000568190.1
ENST00000568309.5
ENST00000568431.5
ENST00000568919.1
ENST00000570115.5
CDS GCA 72 bp GGGCAAGCACCCGGTGCTGGTGAGGAAAAGCCTCTGTaGTGCCAGGGATCCGACGCTGCTGGGCTGCATACA +
Preference number: 6 (lower is better)
Translates to: GQAPGAGEEKPL*CQGSDAAGLHT
Trigger: TGTATGCAGCCCAGCAGCGTCGGATCCCTGGCAGCACAGAGGCTTTTCCTCACCAGCACCGGGTGCTTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
ENST00000562776.5
ENST00000564778.5
ENST00000567289.5
ENST00000568190.1
ENST00000568309.5
ENST00000568431.5
ENST00000568919.1
ENST00000570115.5
CDS GCA 72 bp TGGTGTGTGAGGCTGGACCGGCGGAGAACGTGGGGATaGATACGGTGGAAGTGGGGGAGTCTGCTGACTGGC +
Preference number: 6 (lower is better)
Translates to: WCVRLDRRRTWG*IRWKWGSLLTG
Trigger: GCCAGTCAGCAGACTCCCCCACTTCCACCGTATGCATCCCCACGTTCTCCGCCGGTCCAGCCTCACACACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS CCA 72 bp AGGCTGGACCGGCGGAGAACGTGGGGATGCATACGGTaGAAGTGGGGGAGTCTGCTGACTGGCCGGAGTATG +
Preference number: 6 (lower is better)
Translates to: RLDRRRTWGCIR*KWGSLLTGRSM
Trigger: CATACTCCGGCCAGTCAGCAGACTCCCCCACTTCCACCGTATGCATCCCCACGTTCTCCGCCGGTCCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS TCA 72 bp CGTGGGGATGCATACGGTGGAAGTGGGGGAGTCTGCTaGCTGGCCGGAGTATGTGCTTGCAGTTGGGAGGGC +
Preference number: 6 (lower is better)
Translates to: RGDAYGGSGGVC*LAGVCACSWEG
Trigger: GCCCTCCCAACTGCAAGCACATACTCCGGCCAGTCAGCAGACTCCCCCACTTCCACCGTATGCATCCCCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS CCA 72 bp TTGCTGCTGTCCCTGCACTGGTGCAACTGGTGGGGCTaGATGAGCATGACTCTGGACCACCTGGCCTCCGTG +
Preference number: 6 (lower is better)
Translates to: LLLSLHWCNWWG*MSMTLDHLASV
Trigger: CACGGAGGCCAGGTGGTCCAGAGTCATGCTCATCCAGCCCCACCAGTTGCACCAGTGCAGGGACAGCAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
ENST00000562776.5
ENST00000564778.5
ENST00000567289.5
ENST00000568431.5
ENST00000570115.5
CDS CCA 72 bp GACCGGCGGAGAACGTGGGGATGCATACGGTGGAAGTaGGGGAGTCTGCTGACTGGCCGGAGTATGTGCTTG +
Preference number: 6 (lower is better)
Translates to: DRRRTWGCIRWK*GSLLTGRSMCL
Trigger: CAAGCACATACTCCGGCCAGTCAGCAGACTCCCCCACTTCCACCGTATGCATCCCCACGTTCTCCGCCGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS CCA 72 bp TGTCACTGGTGTGTGAGGCTGGACCGGCGGAGAACGTaGGGATGCATACGGTGGAAGTGGGGGAGTCTGCTG +
Preference number: 6 (lower is better)
Translates to: CHWCVRLDRRRT*GCIRWKWGSLL
Trigger: CAGCAGACTCCCCCACTTCCACCGTATGCATCCCCACGTTCTCCGCCGGTCCAGCCTCACACACCAGTGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS CCA 72 bp CTGCAAGGATGGGGCCGTTCCCAACGAGATTGTCACTaGTGTGTGAGGCTGGACCGGCGGAGAACGTGGGGA +
Preference number: 6 (lower is better)
Translates to: LQGWGRSQRDCH*CVRLDRRRTWG
Trigger: TCCCCACGTTCTCCGCCGGTCCAGCCTCACACACCAGTGACAATCTCGTTGGGAACGGCCCCATCCTTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS CAA 72 bp TCAGGGATGCACTACAAAACCACCGATGCGAGCTCCTaGCTGGGTCGCGGCCTGACGGGTTCCGGCACCGAA +
Preference number: 6 (lower is better)
Translates to: SGMHYKTTDASS*LGRGLTGSGTE
Trigger: TTCGGTGCCGGAACCCGTCAGGCCGCGACCCAGCAAGGAGCTCGCATCGGTGGTTTTGTAGTGCATCCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562776.5
CDS TCA 72 bp GCCAGGGATCCGACGCTGCTGGGCTGCATACACCGGTaGCTCCTGGTCATCCAAACGCCGCTTCATTCTGTG +
Preference number: 6 (lower is better)
Translates to: ARDPTLLGCIHR*LLVIQTPLHSV
Trigger: CACAGAATGAAGCGGCGTTTGGATGACCAGGAGTCACCGGTGTATGCAGCCCAGCAGCGTCGGATCCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
ENST00000562776.5
ENST00000564778.5
ENST00000567289.5
ENST00000568190.1
ENST00000568309.5
ENST00000568431.5
ENST00000568919.1
ENST00000570115.5
CDS TCA 72 bp GATGGGGCCGTTCCCAACGAGATTGTCACTGGTGTGTaGGGCTGGACCGGCGGAGAACGTGGGGATGCATAC +
Preference number: 6 (lower is better)
Translates to: DGAVPNEIVTGV*GWTGGERGDAY
Trigger: GTATGCATCCCCACGTTCTCCGCCGGTCCAGCCTCACACACCAGTGACAATCTCGTTGGGAACGGCCCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS GCA 72 bp CTCCAGCCCCTCACCCATGAGCCACTTGCTGGTCTCTaGTGCCATTTCACGGGGCACATGCTCCTTGGTCCA +
Preference number: 6 (lower is better)
Translates to: LQPLTHEPLAGL*CHFTGHMLLGP
Trigger: TGGACCAAGGAGCATGTGCCCCGTGAAATGGCAGCAGAGACCAGCAAGTGGCTCATGGGTGAGGGGCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
ENST00000566640.1
CDS CCA 72 bp CTGGACCACCTGGCCTCCGTGGGGCTGCACCGCTGTTaGGTGATGATGGCTGCTATGAACTGCTGCTATAGC +
Preference number: 6 (lower is better)
Translates to: LDHLASVGLHRC*VMMAAMNCCYS
Trigger: GCTATAGCAGCAGTTCATAGCAGCCATCATCACCCAACAGCGGTGCAGCCCCACGGAGGCCAGGTGGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
ENST00000562776.5
ENST00000564778.5
ENST00000567289.5
ENST00000568309.5
ENST00000568431.5
ENST00000570115.5
CDS CCA 72 bp GGGATGCATACGGTGGAAGTGGGGGAGTCTGCTGACTaGCCGGAGTATGTGCTTGCAGTTGGGAGGGCTTGC +
Preference number: 6 (lower is better)
Translates to: GMHTVEVGESAD*PEYVLAVGRAC
Trigger: GCAAGCCCTCCCAACTGCAAGCACATACTCCGGCCAGTCAGCAGACTCCCCCACTTCCACCGTATGCATCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS CCA 72 bp ACTGGAGGGGTGGTTCCTGTAGGATGTCTGCGGATCTaGCAGCCATTCTGGCTGGGCCTCTGCGGCTTGTTG +
Preference number: 6 (lower is better)
Translates to: TGGVVPVGCLRI*QPFWLGLCGLL
Trigger: CAACAAGCCGCAGAGGCCCAGCCAGAATGGCTGCCAGATCCGCAGACATCCTACAGGAACCACCCCTCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS GCA 72 bp CACCGCTGTTGGGTGATGATGGCTGCTATGAACTGCTaGTATAGCGGGCCCATGACTGCCGGAGCTCTGTGG +
Preference number: 6 (lower is better)
Translates to: HRCWVMMAAMNC*YSGPMTAGALW
Trigger: CCACAGAGCTCCGGCAGTCATGGGCCCGCTATAGCAGCAGTTCATAGCAGCCATCATCACCCAACAGCGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
ENST00000562776.5
ENST00000564778.5
ENST00000567289.5
ENST00000568190.1
ENST00000568309.5
ENST00000568431.5
ENST00000570115.5
CDS GCA 72 bp CTGCACCGCTGTTGGGTGATGATGGCTGCTATGAACTaGTGCTATAGCGGGCCCATGACTGCCGGAGCTCTG +
Preference number: 6 (lower is better)
Translates to: LHRCWVMMAAMN*CYSGPMTAGAL
Trigger: CAGAGCTCCGGCAGTCATGGGCCCGCTATAGCAGCAGTTCATAGCAGCCATCATCACCCAACAGCGGTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
ENST00000562776.5
ENST00000564778.5
ENST00000567289.5
ENST00000568190.1
ENST00000568309.5
ENST00000568431.5
ENST00000570115.5
CDS GCA 72 bp TGGAAGTGGGGGAGTCTGCTGACTGGCCGGAGTATGTaGTTGCAGTTGGGAGGGCTTGCTGACTTTGGCAGG +
Preference number: 6 (lower is better)
Translates to: WKWGSLLTGRSM*LQLGGLADFGR
Trigger: CCTGCCAAAGTCAGCAAGCCCTCCCAACTGCAAGCACATACTCCGGCCAGTCAGCAGACTCCCCCACTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS CCA 72 bp GTTCCTGTAGGATGTCTGCGGATCTGGCAGCCATTCTaGCTGGGCCTCTGCGGCTTGTTGTTCAGTTGGGGC +
Preference number: 6 (lower is better)
Translates to: VPVGCLRIWQPF*LGLCGLLFSWG
Trigger: GCCCCAACTGAACAACAAGCCGCAGAGGCCCAGCCAGAATGGCTGCCAGATCCGCAGACATCCTACAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS CAA 72 bp AAGTGGGGGAGTCTGCTGACTGGCCGGAGTATGTGCTaGCAGTTGGGAGGGCTTGCTGACTTTGGCAGGTGG +
Preference number: 6 (lower is better)
Translates to: KWGSLLTGRSMC*QLGGLADFGRW
Trigger: CCACCTGCCAAAGTCAGCAAGCCCTCCCAACTGCAAGCACATACTCCGGCCAGTCAGCAGACTCCCCCACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS CAA 90 bp CCACAGGTTGATTGTTCTGCAAGGATGGGGCCGTTCCCAACGAGATaGTCACTGGTGTGTGAGGCTGGACCGGCGGAGAACGTGGGGATG +
Preference number: 6 (lower is better)
Translates to: PQVDCSARMGPFPTR*SLVCEAGPAENVGM
Trigger: CATCCCCACGTTCTCCGCCGGTCCAGCCTCACACACCAGTGACAATCTCGTTGGGAACGGCCCCATCCTTGCAGAACAATCAACCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS GCA 72 bp TGTCTGCGGATCTGGCAGCCATTCTGGCTGGGCCTCTaGGGCTTGTTGTTCAGTTGGGGCTTCTTGACAGTG +
Preference number: 6 (lower is better)
Translates to: CLRIWQPFWLGL*GLLFSWGFLTV
Trigger: CACTGTCAAGAAGCCCCAACTGAACAACAAGCCGCAGAGGCCCAGCCAGAATGGCTGCCAGATCCGCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS CCA 72 bp ATCCGACGCTGCTGGGCTGCATACACCGGTGACTCCTaGTCATCCAAACGCCGCTTCATTCTGTGCTCATGC +
Preference number: 6 (lower is better)
Translates to: IRRCWAAYTGDS*SSKRRFILCSC
Trigger: GCATGAGCACAGAATGAAGCGGCGTTTGGATGACCAGGAGTCACCGGTGTATGCAGCCCAGCAGCGTCGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
ENST00000562776.5
ENST00000564778.5
ENST00000567289.5
ENST00000568190.1
ENST00000568309.5
ENST00000568431.5
ENST00000568919.1
ENST00000570115.5
CDS CCA 72 bp CCTCTGAAATTGCTGCTGTCCCTGCACTGGTGCAACTaGTGGGGCTGGATGAGCATGACTCTGGACCACCTG +
Preference number: 6 (lower is better)
Translates to: PLKLLLSLHWCN*WGWMSMTLDHL
Trigger: CAGGTGGTCCAGAGTCATGCTCATCCAGCCCCACCAGTTGCACCAGTGCAGGGACAGCAGCAATTTCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
ENST00000562776.5
ENST00000564778.5
ENST00000567289.5
ENST00000568431.5
ENST00000570115.5
CDS TCA 72 bp TCCTTCCCTTCCTTTTCCTGCTGCTCTCGACCACGTTaGCACTTCCGGATCCGCCGTAGATTCCTGGGGAGA +
Preference number: 6 (lower is better)
Translates to: SFPSFSCCSRPR*HFRIRRRFLGR
Trigger: TCTCCCCAGGAATCTACGGCGGATCCGGAAGTGTCAACGTGGTCGAGAGCAGCAGGAAAAGGAAGGGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
ENST00000570124.1
CDS CCA 72 bp CACCTTCAGCCTCTGAAATTGCTGCTGTCCCTGCACTaGTGCAACTGGTGGGGCTGGATGAGCATGACTCTG +
Preference number: 6 (lower is better)
Translates to: HLQPLKLLLSLH*CNWWGWMSMTL
Trigger: CAGAGTCATGCTCATCCAGCCCCACCAGTTGCACCAGTGCAGGGACAGCAGCAATTTCAGAGGCTGAAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
ENST00000562776.5
ENST00000564778.5
ENST00000567289.5
ENST00000568431.5
ENST00000570115.5
CDS TCA 72 bp CGCCGTAGATTCCTATTGCAGAAAAGCCCCGGAGGATaGGAGCTCGTCCAGATGCAGATTCCCGTGACTTCC +
Preference number: 6 (lower is better)
Translates to: RRRFLLQKSPGG*ELVQMQIPVTS
Trigger: GGAAGTCACGGGAATCTGCATCTGGACGAGCTCTCATCCTCCGGGGCTTTTCTGCAATAGGAATCTACGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566640.1
CDS TCA 72 bp AGGGCTCACATGTGCTTGACATGTTCCAAAACAGCATaGAGGCTGGGTAGCTTCCGAGCCAGGCGAGGAGTC +
Preference number: 6 (lower is better)
Translates to: RAHMCLTCSKTA*RLGSFRARRGV
Trigger: GACTCCTCGCCTGGCTCGGAAGCTACCCAGCCTTCATGCTGTTTTGGAACATGTCAAGCACATGTGAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568309.5
CDS GCA 72 bp TCCTGGTCATCCAAACGCCGCTTCATTCTGTGCTCATaGTCAGGGATGCACTACAAAACCTCGGCCGCGGAA +
Preference number: 6 (lower is better)
Translates to: SWSSKRRFILCS*SGMHYKTSAAE
Trigger: TTCCGCGGCCGAGGTTTTGTAGTGCATCCCTGAGCATGAGCACAGAATGAAGCGGCGTTTGGATGACCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360439.8
CDS GCA 72 bp GGTGACTCCTGGTCATCCAAACGCCGCTTCATTCTGTaGTCATGCTCAGGGATGCACTACAAAACCTCGGCC +
Preference number: 6 (lower is better)
Translates to: GDSWSSKRRFIL*SCSGMHYKTSA
Trigger: GGCCGAGGTTTTGTAGTGCATCCCTGAGCATGAGCACAGAATGAAGCGGCGTTTGGATGACCAGGAGTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360439.8
CDS GCA 72 bp TCCTGGTCATCCAAACGCCGCTTCATTCTGTGCTCATaGTCAGGGATGCACTACAAAACCCTCGAGTCCGGC +
Preference number: 6 (lower is better)
Translates to: SWSSKRRFILCS*SGMHYKTLESG
Trigger: GCCGGACTCGAGGGTTTTGTAGTGCATCCCTGAGCATGAGCACAGAATGAAGCGGCGTTTGGATGACCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394949.8
CDS GCA 72 bp CACGTTGACACTTCCGGATCCGCCGTAGATTCCTATTaGAGAAAAGCCCCGGAGGATGAGAGCTCGTCCAGA +
Preference number: 6 (lower is better)
Translates to: HVDTSGSAVDSY*RKAPEDESSSR
Trigger: TCTGGACGAGCTCTCATCCTCCGGGGCTTTTCTGCAATAGGAATCTACGGCGGATCCGGAAGTGTCAACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566640.1
CDS TCA 72 bp TCCTTCCCTTCCTTTTCCTGCTGCTCTCGACCACGTTaGCACTTCCGGATCCGCCGTAGATTCCTATTGCAG +
Preference number: 6 (lower is better)
Translates to: SFPSFSCCSRPR*HFRIRRRFLLQ
Trigger: CTGCAATAGGAATCTACGGCGGATCCGGAAGTGTCAACGTGGTCGAGAGCAGCAGGAAAAGGAAGGGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566640.1
CDS GCA 72 bp GGTGACTCCTGGTCATCCAAACGCCGCTTCATTCTGTaGTCATGCTCAGGGATGCACTACAAAACCCTCGAG +
Preference number: 6 (lower is better)
Translates to: GDSWSSKRRFIL*SCSGMHYKTLE
Trigger: CTCGAGGGTTTTGTAGTGCATCCCTGAGCATGAGCACAGAATGAAGCGGCGTTTGGATGACCAGGAGTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394949.8
CDS GCA 72 bp TCCTGGTCATCCAAACGCCGCTTCATTCTGTGCTCATaGTCAGGGATGCACTACAAAACCACCGATGCGAGC +
Preference number: 6 (lower is better)
Translates to: SWSSKRRFILCS*SGMHYKTTDAS
Trigger: GCTCGCATCGGTGGTTTTGTAGTGCATCCCTGAGCATGAGCACAGAATGAAGCGGCGTTTGGATGACCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562776.5
CDS GCA 72 bp TCCTGGTCATCCAAACGCCGCTTCATTCTGTGCTCATaGTCAGGGATGCACTACAAAACCTTCCGAGCCAGG +
Preference number: 6 (lower is better)
Translates to: SWSSKRRFILCS*SGMHYKTFRAR
Trigger: CCTGGCTCGGAAGGTTTTGTAGTGCATCCCTGAGCATGAGCACAGAATGAAGCGGCGTTTGGATGACCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564778.5
CDS CAA 72 bp GCCATTCTGGCTGGGCCTCTGCGGCTTGTTGTTCAGTaGGGGCTTCTTGACAGTGCCTCCATGATCATTTCT +
Preference number: 6 (lower is better)
Translates to: AILAGPLRLVVQ*GLLDSASMIIS
Trigger: AGAAATGATCATGGAGGCACTGTCAAGAAGCCCCAACTGAACAACAAGCCGCAGAGGCCCAGCCAGAATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS GCA 72 bp ACGAGCAACCTGGGCATACACCTCCTGCTCTGTCAATaGTGGAGTGTAGTTTCCTCCAGCTTCCTTGGCATT +
Preference number: 6 (lower is better)
Translates to: TSNLGIHLLLCQ*WSVVSSSFLGI
Trigger: AATGCCAAGGAAGCTGGAGGAAACTACACTCCAGCATTGACAGAGCAGGAGGTGTATGCCCAGGTTGCTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS GCA 72 bp AGGGGGACTGCCCCCAACACCATTGTGCTTCTTAACTaGCCCTGTGGCTTCATCTACATCCATCTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: RGTAPNTIVLLN*PCGFIYIHLFF
Trigger: GAAGAAGAGATGGATGTAGATGAAGCCACAGGGGCAGTTAAGAAGCACAATGGTGTTGGGGGCAGTCCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS GCA 72 bp GGTGACTCCTGGTCATCCAAACGCCGCTTCATTCTGTaGTCATGCTCAGGGATGCACTACAAAACCGCAAAG +
Preference number: 6 (lower is better)
Translates to: GDSWSSKRRFIL*SCSGMHYKTAK
Trigger: CTTTGCGGTTTTGTAGTGCATCCCTGAGCATGAGCACAGAATGAAGCGGCGTTTGGATGACCAGGAGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394947.8
ENST00000567289.5
ENST00000568919.1
CDS GCA 72 bp GGTGACTCCTGGTCATCCAAACGCCGCTTCATTCTGTaGTCATGCTCAGGGATGCACTACAAAACCACCGAT +
Preference number: 6 (lower is better)
Translates to: GDSWSSKRRFIL*SCSGMHYKTTD
Trigger: ATCGGTGGTTTTGTAGTGCATCCCTGAGCATGAGCACAGAATGAAGCGGCGTTTGGATGACCAGGAGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562776.5
CDS GCA 72 bp GGTGACTCCTGGTCATCCAAACGCCGCTTCATTCTGTaGTCATGCTCAGGGATGCACTACAAAACCTTCCGA +
Preference number: 6 (lower is better)
Translates to: GDSWSSKRRFIL*SCSGMHYKTFR
Trigger: TCGGAAGGTTTTGTAGTGCATCCCTGAGCATGAGCACAGAATGAAGCGGCGTTTGGATGACCAGGAGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564778.5
CDS GCA 72 bp TCCTGGTCATCCAAACGCCGCTTCATTCTGTGCTCATaGTCAGGGATGCACTACAAAACCTGTAGTCCCAGC +
Preference number: 6 (lower is better)
Translates to: SWSSKRRFILCS*SGMHYKTCSPS
Trigger: GCTGGGACTACAGGTTTTGTAGTGCATCCCTGAGCATGAGCACAGAATGAAGCGGCGTTTGGATGACCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568431.5
CDS GCA 72 bp TCCTGGTCATCCAAACGCCGCTTCATTCTGTGCTCATaGTCAGGGATGCACTACAAAACCGCAAAGCTGCTT +
Preference number: 6 (lower is better)
Translates to: SWSSKRRFILCS*SGMHYKTAKLL
Trigger: AAGCAGCTTTGCGGTTTTGTAGTGCATCCCTGAGCATGAGCACAGAATGAAGCGGCGTTTGGATGACCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394947.8
ENST00000567289.5
ENST00000568919.1
CDS GCA 72 bp GGTGACTCCTGGTCATCCAAACGCCGCTTCATTCTGTaGTCATGCTCAGGGATGCACTACAAAACCTGTAGT +
Preference number: 6 (lower is better)
Translates to: GDSWSSKRRFIL*SCSGMHYKTCS
Trigger: ACTACAGGTTTTGTAGTGCATCCCTGAGCATGAGCACAGAATGAAGCGGCGTTTGGATGACCAGGAGTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568431.5
CDS GCA 72 bp TCCTGGTCATCCAAACGCCGCTTCATTCTGTGCTCATaGTCAGGGATGCACTACAAAACCTGTAATCCCAGC +
Preference number: 6 (lower is better)
Translates to: SWSSKRRFILCS*SGMHYKTCNPS
Trigger: GCTGGGATTACAGGTTTTGTAGTGCATCCCTGAGCATGAGCACAGAATGAAGCGGCGTTTGGATGACCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565264.1
ENST00000570115.5
CDS CCA 72 bp AATCCCATTATCAGATCGGGGTGGCCTTTGAATAGCTaGGACACACGACTAATCACTCCTGGGGTGTCGATG +
Preference number: 6 (lower is better)
Translates to: NPIIRSGWPLNS*DTRLITPGVSM
Trigger: CATCGACACCCCAGGAGTGATTAGTCGTGTGTCCCAGCTATTCAAAGGCCACCCCGATCTGATAATGGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS CCA 72 bp AGCAACCTGGGCATACACCTCCTGCTCTGTCAATGCTaGAGTGTAGTTTCCTCCAGCTTCCTTGGCATTTCT +
Preference number: 6 (lower is better)
Translates to: SNLGIHLLLCQC*SVVSSSFLGIS
Trigger: AGAAATGCCAAGGAAGCTGGAGGAAACTACACTCCAGCATTGACAGAGCAGGAGGTGTATGCCCAGGTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS CCA 72 bp CTGATGTGCCCCCAAGGGTGTTGTCCAAGCGAAATTTaGCTTGTTCTTCAGCAGACAAGCGGGAAAGCTTCT +
Preference number: 6 (lower is better)
Translates to: LMCPQGCCPSEI*LVLQQTSGKAS
Trigger: AGAAGCTTTCCCGCTTGTCTGCTGAAGAACAAGCCAAATTTCGCTTGGACAACACCCTTGGGGGCACATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS CAA 72 bp TGTGCCCCCAAGGGTGTTGTCCAAGCGAAATTTGGCTaGTTCTTCAGCAGACAAGCGGGAAAGCTTCTTCTG +
Preference number: 6 (lower is better)
Translates to: CAPKGVVQAKFG*FFSRQAGKLLL
Trigger: CAGAAGAAGCTTTCCCGCTTGTCTGCTGAAGAACAAGCCAAATTTCGCTTGGACAACACCCTTGGGGGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS CAA 72 bp TCTGATGTGCCCCCAAGGGTGTTGTCCAAGCGAAATTaGGCTTGTTCTTCAGCAGACAAGCGGGAAAGCTTC +
Preference number: 6 (lower is better)
Translates to: SDVPPRVLSKRN*ACSSADKRESF
Trigger: GAAGCTTTCCCGCTTGTCTGCTGAAGAACAAGCCAAATTTCGCTTGGACAACACCCTTGGGGGCACATCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS TCA 72 bp GTAGCTGGGTGTTACAGAGTACTGAATTCCCGTAGCTaGCTGCATGGTCTCAGACACTGCTTCATACACAGG +
Preference number: 6 (lower is better)
Translates to: VAGCYRVLNSRS*LHGLRHCFIHR
Trigger: CCTGTGTATGAAGCAGTGTCTGAGACCATGCAGTCAGCTACGGGAATTCAGTACTCTGTAACACCCAGCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
ENST00000562776.5
ENST00000564778.5
ENST00000567289.5
ENST00000568190.1
ENST00000568309.5
ENST00000568431.5
ENST00000568919.1
ENST00000570115.5
CDS GCA 72 bp AACTCAGGGAATTTCCCCAGGAAAGGAGAGACTAGTTaGACAAGCTCAGCACGAGAGATCACCTCCTGGTTA +
Preference number: 6 (lower is better)
Translates to: NSGNFPRKGETS*TSSAREITSWL
Trigger: TAACCAGGAGGTGATCTCTCGTGCTGAGCTTGTGCAACTAGTCTCTCCTTTCCTGGGGAAATTCCCTGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS GCA 72 bp GGTGACTCCTGGTCATCCAAACGCCGCTTCATTCTGTaGTCATGCTCAGGGATGCACTACAAAACCTGTAAT +
Preference number: 6 (lower is better)
Translates to: GDSWSSKRRFIL*SCSGMHYKTCN
Trigger: ATTACAGGTTTTGTAGTGCATCCCTGAGCATGAGCACAGAATGAAGCGGCGTTTGGATGACCAGGAGTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565264.1
ENST00000570115.5
CDS CCA 72 bp CTCTCTCGGTTTTCTTCTTCAATTTGCCGTTCGGCTTaGGAACAAATCCGTAGCAGCCTCAGGCAGAGAATC +
Preference number: 6 (lower is better)
Translates to: LSRFSSSICRSA*EQIRSSLRQRI
Trigger: GATTCTCTGCCTGAGGCTGCTACGGATTTGTTCCCAAGCCGAACGGCAAATTGAAGAAGAAAACCGAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS CAA 72 bp AAGGTGTTGAATCCCATTATCAGATCGGGGTGGCCTTaGAATAGCTGGGACACACGACTAATCACTCCTGGG +
Preference number: 6 (lower is better)
Translates to: KVLNPIIRSGWP*NSWDTRLITPG
Trigger: CCCAGGAGTGATTAGTCGTGTGTCCCAGCTATTCAAAGGCCACCCCGATCTGATAATGGGATTCAACACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS CAA 90 bp CTGATGAACCTGGCCAGGAGTTGTCACATTCACCATGTCATTGGTTaGCACCTCAATTTTGTAGCCAGGGGGCAAGAAGGTGTTGAATCC +
Preference number: 6 (lower is better)
Translates to: LMNLARSCHIHHVIG*HLNFVARGQEGVES
Trigger: GGATTCAACACCTTCTTGCCCCCTGGCTACAAAATTGAGGTGCAAACCAATGACATGGTGAATGTGACAACTCCTGGCCAGGTTCATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS TCA 72 bp CCGGAGCAGGGCGGTCCTCCGATACATATAGTCCTCTaGTTTGATCACATACACCATCTTGTAGGAATTCAG +
Preference number: 6 (lower is better)
Translates to: PEQGGPPIHIVL*FDHIHHLVGIQ
Trigger: CTGAATTCCTACAAGATGGTGTATGTGATCAAATCAGAGGACTATATGTATCGGAGGACCGCCCTGCTCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
ENST00000566640.1
CDS CCA 72 bp GGCAAGAAGGTGTTGAATCCCATTATCAGATCGGGGTaGCCTTTGAATAGCTGGGACACACGACTAATCACT +
Preference number: 6 (lower is better)
Translates to: GKKVLNPIIRSG*PLNSWDTRLIT
Trigger: AGTGATTAGTCGTGTGTCCCAGCTATTCAAAGGCCACCCCGATCTGATAATGGGATTCAACACCTTCTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS CAA 90 bp TTCACATGGTGGATAATCAGAGCAGCAGCATCTTCCAGTATTTGTTaGTCTTCATACGCAAGTGAGAGGTGTGGGCCAACAGGTACACCA +
Preference number: 6 (lower is better)
Translates to: FTWWIIRAAASSSIC*SSYASERCGPTGTP
Trigger: TGGTGTACCTGTTGGCCCACACCTCTCACTTGCGTATGAAGACAAACAAATACTGGAAGATGCTGCTGCTCTGATTATCCACCATGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS TCA 72 bp AGCATCTTCCAGTATTTGTTTGTCTTCATACGCAAGTaGGAGGTGTGGGCCAACAGGTACACCAGCATTCTC +
Preference number: 6 (lower is better)
Translates to: SIFQYLFVFIRK*EVWANRYTSIL
Trigger: GAGAATGCTGGTGTACCTGTTGGCCCACACCTCTCACTTGCGTATGAAGACAAACAAATACTGGAAGATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS GCA 72 bp CCAAACGCCGCTTCATTCTGTGCTCATGCTCAGGGATaGACTACAAAACCTACTGATAAGGTAACTTCTGAG +
Preference number: 6 (lower is better)
Translates to: PNAASFCAHAQG*TTKPTDKVTSE
Trigger: CTCAGAAGTTACCTTATCAGTAGGTTTTGTAGTGCATCCCTGAGCATGAGCACAGAATGAAGCGGCGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568309.5
CDS CCA 72 bp TATCTCCATAGCAATGCCCTCTGTGGCTCGCTCCTTTaGATAAGTTTCCAGATGTACAGACTCCTTATAGCC +
Preference number: 6 (lower is better)
Translates to: YLHSNALCGSLL*ISFQMYRLLIA
Trigger: GGCTATAAGGAGTCTGTACATCTGGAAACTTATCCAAAGGAGCGAGCCACAGAGGGCATTGCTATGGAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS CCA 72 bp GCTTTATCAGCATATATCCTCTGGAGTGCTTTTCTATaGATGACTTCTGATGTGCCCCCAAGGGTGTTGTCC +
Preference number: 6 (lower is better)
Translates to: ALSAYILWSAFL*MTSDVPPRVLS
Trigger: GGACAACACCCTTGGGGGCACATCAGAAGTCATCCATAGAAAAGCACTCCAGAGGATATATGCTGATAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS CAA 72 bp TTTCTATGGATGACTTCTGATGTGCCCCCAAGGGTGTaGTCCAAGCGAAATTTGGCTTGTTCTTCAGCAGAC +
Preference number: 6 (lower is better)
Translates to: FLWMTSDVPPRV*SKRNLACSSAD
Trigger: GTCTGCTGAAGAACAAGCCAAATTTCGCTTGGACAACACCCTTGGGGGCACATCAGAAGTCATCCATAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS CAA 72 bp CTAAAACCACTATTTCTCTTCCCTCATTCTAGTCCCTaGGTTGGCTCCAGCTTACCTGGTAGCTGGGTGTTA +
Preference number: 6 (lower is better)
Translates to: LKPLFLFPHSSP*VGSSLPGSWVL
Trigger: TAACACCCAGCTACCAGGTAAGCTGGAGCCAACCAAGGGACTAGAATGAGGGAAGAGAAATAGTGGTTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568919.1
CDS CAA 90 bp GTTGATCCCCTGGTGGTCCAGAGACTTCAAGTAGTATTTCTCATTTaGTTCTCGCCATACTTTGTTAAAGCCTCTCTGAGCTTCTCGCCA +
Preference number: 6 (lower is better)
Translates to: VDPLVVQRLQVVFLI*FSPYFVKASLSFSP
Trigger: TGGCGAGAAGCTCAGAGAGGCTTTAACAAAGTATGGCGAGAACAAAATGAGAAATACTACTTGAAGTCTCTGGACCACCAGGGGATCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS TCA 72 bp TCTACATCAACATCCATAGGTTCTTTGAGACGTAGCTaGATGGCAGGGCTGTCACTCTTGTCTCGCTTTATG +
Preference number: 6 (lower is better)
Translates to: STSTSIGSLRRS*MAGLSLLSRFM
Trigger: CATAAAGCGAGACAAGAGTGACAGCCCTGCCATTCAGCTACGTCTCAAAGAACCTATGGATGTTGATGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS CAA 72 bp TGGATAATCAGAGCAGCAGCATCTTCCAGTATTTGTTaGTCTTCATACGCAAGTGAGAGGTGTGGGCCAACA +
Preference number: 6 (lower is better)
Translates to: WIIRAAASSSIC*SSYASERCGPT
Trigger: TGTTGGCCCACACCTCTCACTTGCGTATGAAGACAAACAAATACTGGAAGATGCTGCTGCTCTGATTATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS CAA 90 bp TATAATTGCCTAAAACCACTATTTCTCTTCCCTCATTCTAGTCCCTaGGTTGGCTCCAGCTTACCTGGTAGCTGGGTGTTACAGAGTACT +
Preference number: 6 (lower is better)
Translates to: YNCLKPLFLFPHSSP*VGSSLPGSWVLQST
Trigger: AGTACTCTGTAACACCCAGCTACCAGGTAAGCTGGAGCCAACCAAGGGACTAGAATGAGGGAAGAGAAATAGTGGTTTTAGGCAATTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568919.1
CDS TCA 72 bp TTGTTGTTCAGTTGGGGCTTCTTGACAGTGCCTCCATaGTCATTTCTCACAGAATCAACCTTCTCAGCAGTT +
Preference number: 6 (lower is better)
Translates to: LLFSWGFLTVPP*SFLTESTFSAV
Trigger: AACTGCTGAGAAGGTTGATTCTGTGAGAAATGATCATGGAGGCACTGTCAAGAAGCCCCAACTGAACAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS TCA 72 bp ATATATCCTCTGGAGTGCTTTTCTATGGATGACTTCTaGTGTGCCCCCAAGGGTGTTGTCCAAGCGAAATTT +
Preference number: 6 (lower is better)
Translates to: IYPLECFSMDDF*CAPKGVVQAKF
Trigger: AAATTTCGCTTGGACAACACCCTTGGGGGCACATCAGAAGTCATCCATAGAAAAGCACTCCAGAGGATATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS CCA 72 bp CTGTCAATGCTGGAGTGTAGTTTCCTCCAGCTTCCTTaGCATTTCTCTGCTCTTTCTGATATGTGTGCAAAA +
Preference number: 6 (lower is better)
Translates to: LSMLECSFLQLP*HFSALSDMCAK
Trigger: TTTTGCACACATATCAGAAAGAGCAGAGAAATGCCAAGGAAGCTGGAGGAAACTACACTCCAGCATTGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS CAA 72 bp ATTAACATAGTTGATGGCATGATTAAACTCCACAGGTaGATTGTTCTGCAAGGATGGGGCCGTTCCCAACGA +
Preference number: 6 (lower is better)
Translates to: INIVDGMIKLHR*IVLQGWGRSQR
Trigger: TCGTTGGGAACGGCCCCATCCTTGCAGAACAATCAACCTGTGGAGTTTAATCATGCCATCAACTATGTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS CAA 72 bp TGTGTCCAGAAGCTCAATAGTCAGCTGGACCTGGCCTaGGCTCTGAATAAACATAAGCTTAAAGCAATTCTC +
Preference number: 6 (lower is better)
Translates to: CVQKLNSQLDLA*ALNKHKLKAIL
Trigger: GAGAATTGCTTTAAGCTTATGTTTATTCAGAGCCAAGGCCAGGTCCAGCTGACTATTGAGCTTCTGGACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS CAA 90 bp CTTGATCTTATTAACATAGTTGATGGCATGATTAAACTCCACAGGTaGATTGTTCTGCAAGGATGGGGCCGTTCCCAACGAGATTGTCAC +
Preference number: 6 (lower is better)
Translates to: LDLINIVDGMIKLHR*IVLQGWGRSQRDCH
Trigger: GTGACAATCTCGTTGGGAACGGCCCCATCCTTGCAGAACAATCAACCTGTGGAGTTTAATCATGCCATCAACTATGTTAATAAGATCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS TCA 72 bp GAACAGCAATGGAGGGATTCTTTCTCAGACCATCAATaGTGTCAGCTGCTTTATCAGCATATATCCTCTGGA +
Preference number: 6 (lower is better)
Translates to: EQQWRDSFSDHQ*CQLLYQHISSG
Trigger: TCCAGAGGATATATGCTGATAAAGCAGCTGACATCATTGATGGTCTGAGAAAGAATCCCTCCATTGCTGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS GCA 72 bp GGAGGGATTCTTTCTCAGACCATCAATGATGTCAGCTaGTTTATCAGCATATATCCTCTGGAGTGCTTTTCT +
Preference number: 6 (lower is better)
Translates to: GGILSQTINDVS*FISIYPLECFS
Trigger: AGAAAAGCACTCCAGAGGATATATGCTGATAAAGCAGCTGACATCATTGATGGTCTGAGAAAGAATCCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS CCA 72 bp TCAATGATGTCAGCTGCTTTATCAGCATATATCCTCTaGAGTGCTTTTCTATGGATGACTTCTGATGTGCCC +
Preference number: 6 (lower is better)
Translates to: SMMSAALSAYIL*SAFLWMTSDVP
Trigger: GGGCACATCAGAAGTCATCCATAGAAAAGCACTCCAGAGGATATATGCTGATAAAGCAGCTGACATCATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
CDS CAA 72 bp GGGGCTTTGAATACTGTGCCGTATTTGACACGATACTaGTTAATGCTCACAAAATGCAGGGTCTCTGTATCA +
Preference number: 6 (lower is better)
Translates to: GALNTVPYLTRY*LMLTKCRVSVS
Trigger: TGATACAGAGACCCTGCATTTTGTGAGCATTAACAAGTATCGTGTCAAATACGGCACAGTATTCAAAGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360439.8
ENST00000394947.8
ENST00000394949.8
ENST00000566640.1
CDS CAA 72 bp AGGTGGAAGGAAATCACAAAAACAGCTCCTAATGCATaGGGCACTCTAGTAAATTCTATGATTACAATGCCC +
Preference number: 6 (lower is better)
Translates to: RWKEITKTAPNA*GTLVNSMITMP
Trigger: GGGCATTGTAATCATAGAATTTACTAGAGTGCCCAATGCATTAGGAGCTGTTTTTGTGATTTCCTTCCACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570124.1