RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SIM2 (Homo sapiens)

Ensembl gene IDs: ENSG00000159263

Ensembl transcript IDs: ENST00000290399.11, ENST00000431229.1, ENST00000460783.1, ENST00000481185.1, ENST00000483178.2

Found 280 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGGGCGCTCCTCGGCCCTCGGCACCGGCGCGCGGGGCCTCCGCGGTaGAAATCCGCAAGTCGGCGGCGGGGTCCAATTCAAACAGCTGTC +
Preference number: 1 (lower is better)
Translates to: RALLGPRHRRAGPPR*KSASRRRGPIQTAV
Trigger: GACAGCTGTTTGAATTGGACCCCGCCGCCGACTTGCGGATTTCCACCGCGGAGGCCCCGCGCGCCGGTGCCGAGGGCCGAGGAGCGCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR CCA 90 bp GGAGTGAAACCGCTTCAATCCCCCAGCGGGACTGTTGTGGAACGTTaGGGACAAGGCAAGACGCGTGAAGCCCGATTTCAAGGTGAGGAA +
Preference number: 1 (lower is better)
Translates to: GVKPLQSPSGTVVER*GQGKTREARFQGEE
Trigger: TTCCTCACCTTGAAATCGGGCTTCACGCGTCTTGCCTTGTCCCCAACGTTCCACAACAGTCCCGCTGGGGGATTGAAGCGGTTTCACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR GCA 90 bp CGTGGAGAGGCGGGCACATCCCTTCCTACCATCCAGCCCCTTCGCTaGATGACCCACGGTCCTAAATTTGCAAATTGTGACTCTTACCAT +
Preference number: 1 (lower is better)
Translates to: RGEAGTSLPTIQPLR*MTHGPKFANCDSYH
Trigger: ATGGTAAGAGTCACAATTTGCAAATTTAGGACCGTGGGTCATGCAGCGAAGGGGCTGGATGGTAGGAAGGGATGTGCCCGCCTCTCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR GCA 90 bp TGTAATCCCTGGAATTCTGACCCAAGAGCACGAGGGGAGCAGGCTTaGACCACTTTTGTCCTCTACCTAGCACTCAACACGGGTTCTGGC +
Preference number: 1 (lower is better)
Translates to: CNPWNSDPRARGEQA*TTFVLYLALNTGSG
Trigger: GCCAGAACCCGTGTTGAGTGCTAGGTAGAGGACAAAAGTGGTGCAAGCCTGCTCCCCTCGTGCTCTTGGGTCAGAATTCCAGGGATTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483178.2
3UTR TCA 90 bp TTTAGGCACGGCATCTTGGTTAAGGAGAAGCTTGGTCTAGACCCGTaGTGCTGTAATCCCTGGAATTCTGACCCAAGAGCACGAGGGGAG +
Preference number: 1 (lower is better)
Translates to: FRHGILVKEKLGLDP*CCNPWNSDPRARGE
Trigger: CTCCCCTCGTGCTCTTGGGTCAGAATTCCAGGGATTACAGCATCACGGGTCTAGACCAAGCTTCTCCTTAACCAAGATGCCGTGCCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483178.2
3UTR TCA 90 bp CACGGTCCTAAATTTGCAAATTGTGACTCTTACCATGAGGCCCACTaGCAGACACCCTGTAGGGATTGTGTCAGGTCCTCACTAAGTGAC +
Preference number: 1 (lower is better)
Translates to: HGPKFANCDSYHEAH*QTPCRDCVRSSLSD
Trigger: GTCACTTAGTGAGGACCTGACACAATCCCTACAGGGTGTCTGTCAGTGGGCCTCATGGTAAGAGTCACAATTTGCAAATTTAGGACCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR TCA 90 bp TTACACCCCCTTAAGCATGTTTTTCCTTCACAAGGTGCAGTCCATTaGCAGTGTTCCGTATTGCACGTGCAATTTAACTTTATTAGCACT +
Preference number: 1 (lower is better)
Translates to: LHPLKHVFPSQGAVH*QCSVLHVQFNFIST
Trigger: AGTGCTAATAAAGTTAAATTGCACGTGCAATACGGAACACTGTCAATGGACTGCACCTTGTGAAGGAAAAACATGCTTAAGGGGGTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR TCA 90 bp AGATCTGTGTGGGCCAGAGGGATTTTGCCACGTAATAATGAAGCTTaGCAGGGTCATTCTCATAAACTGTCTGGCTACATATATATTTTT +
Preference number: 1 (lower is better)
Translates to: RSVWARGILPRNNEA*QGHSHKLSGYIYIF
Trigger: AAAAATATATATGTAGCCAGACAGTTTATGAGAATGACCCTGTCAAGCTTCATTATTACGTGGCAAAATCCCTCTGGCCCACACAGATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR CCA 90 bp TTGTTAATGTATTTGGGAAGCACACCTATGTTCACAGACACAAAATaGAATTGCATGGTCACCCCCTTAGTCTTGGTTTGTTGGCTTTTT +
Preference number: 1 (lower is better)
Translates to: LLMYLGSTPMFTDTK*NCMVTPLVLVCWLF
Trigger: AAAAAGCCAACAAACCAAGACTAAGGGGGTGACCATGCAATTCCATTTTGTGTCTGTGAACATAGGTGTGCTTCCCAAATACATTAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR-3UTR CCA 90 bp GTGGAAATCCGCAAGTCGGCGGCGGGGTCCAATTCAAACAGCTGTCTCTGCATAATTTGCCGGGCTCGGTaGCGCCGCAGCCCCGGGAGG +
Preference number: 2 (lower is better)
Translates to: VEIRKSAAGSNSNSCLCIICRAR*RRSPGR
Trigger: CCTCCCGGGGCTGCGGCGCCACCGAGCCCGGCAAAT...TATGCAGAGACAGCTGTTTGAATTGGACCCCGCCGCCGACTTGCGGATTTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR CAA 90 bp AAAGGGCTCGTGACACAGGCGTCCCCTCCCAGGTCTGCCGTCCACTaGGAAGAGCGGACTGTGGTAGGGTGGGTTTTCCCTCCTGAAAGT +
Preference number: 2 (lower is better)
Translates to: KGLVTQASPPRSAVH*EERTVVGWVFPPES
Trigger: ACTTTCAGGAGGGAAAACCCACCCTACCACAGTCCGCTCTTCCAAGTGGACGGCAGACCTGGGAGGGGACGCCTGTGTCACGAGCCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR-3UTR TCA 90 bp CTGAGTGCGTGGAGAGGCGGGCACATCCCTTCCTACCATCCAGCCCCTTCGCTGGTGGGTTTTCCCTCCTaGAAGTGGAGGATATTTGCG +
Preference number: 2 (lower is better)
Translates to: LSAWRGGHIPSYHPAPSLVGFPS*KWRIFA
Trigger: CGCAAATATCCTCCACTTTCAGGAGGGAAAACCCAC...CAGCGAAGGGGCTGGATGGTAGGAAGGGATGTGCCCGCCTCTCCACGCACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR-3UTR CCA 90 bp CCTACCATCCAGCCCCTTCGCTGCATGACCCACGGTCCTAAATTTGCAAATTGTCAAGCCCCCAGCAACTaGGTCGCACCGGCCCTCGCA +
Preference number: 2 (lower is better)
Translates to: PTIQPLRCMTHGPKFANCQAPSN*VAPALA
Trigger: TGCGAGGGCCGGTGCGACCCAGTTGCTGGGGGCTTG...ACAATTTGCAAATTTAGGACCGTGGGTCATGCAGCGAAGGGGCTGGATGGTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR CAA 90 bp CGGACTGTGGTAGGGTGGGTTTTCCCTCCTGAAAGTGGAGGATATTaGCGGAGTGAAACCGCTTCAATCCCCCAGCGGGACTGTTGTGGA +
Preference number: 2 (lower is better)
Translates to: RTVVGWVFPPESGGY*RSETASIPQRDCCG
Trigger: TCCACAACAGTCCCGCTGGGGGATTGAAGCGGTTTCACTCCGCAAATATCCTCCACTTTCAGGAGGGAAAACCCACCCTACCACAGTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR-3UTR GCA 90 bp ACACAGGCGTCCCCTCCCAGGTCTGCCGTCCACTTGGAAGAGCGGACTGTGGTAAAAGTGGAGGATATTTaGGGAGTGAAACCGCTTCAA +
Preference number: 2 (lower is better)
Translates to: TQASPPRSAVHLEERTVVKVEDI*GVKPLQ
Trigger: TTGAAGCGGTTTCACTCCGCAAATATCCTCCACTTT...TACCACAGTCCGCTCTTCCAAGTGGACGGCAGACCTGGGAGGGGACGCCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR-3UTR TCA 90 bp GTGCGTGGAGAGGCGGGCACATCCCTTCCTACCATCCAGCCCCTTCGCTGCATGCGTAATAATGAAGCTTaGCAGGGTCATTCTCATAAA +
Preference number: 2 (lower is better)
Translates to: VRGEAGTSLPTIQPLRCMRNNEA*QGHSHK
Trigger: TTTATGAGAATGACCCTGTCAAGCTTCATTATTACG...CATGCAGCGAAGGGGCTGGATGGTAGGAAGGGATGTGCCCGCCTCTCCACGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR-3UTR GCA 90 bp ACGGCGGTTCAATGCATTGTGCAGTTCAGAGCCATGACAGGATTTTTCCATGTTGTCCCCTCCCAGGTCTaGCGTCCACTTGGAAGAGCG +
Preference number: 2 (lower is better)
Translates to: TAVQCIVQFRAMTGFFHVVPSQV*RPLGRA
Trigger: CGCTCTTCCAAGTGGACGGCAGACCTGGGAGGGGAC...AACATGGAAAAATCCTGTCATGGCTCTGAACTGCACAATGCATTGAACCGCCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR-3UTR CCA 90 bp ATGGAATTGCATGGTCACCCCCTTAGTCTTGGTTTGTTGGCTTTTTGTATTGAAGCGGGGCCTCCGCGGTaGAAATCCGCAAGTCGGCGG +
Preference number: 2 (lower is better)
Translates to: MELHGHPLSLGLLAFCIEAGPPR*KSASRR
Trigger: CCGCCGACTTGCGGATTTCCACCGCGGAGGCCCCGC...TTCAATACAAAAAGCCAACAAACCAAGACTAAGGGGGTGACCATGCAATTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR-3UTR CCA 90 bp CGGACTGTGGTAGGGTGGGTTTTCCCTCCTGAAAGTGGAGGATATTTGCGGAGTACTGTTGTGGAACGTTaGGGACAAGGCAAGACGCGT +
Preference number: 2 (lower is better)
Translates to: RTVVGWVFPPESGGYLRSTVVER*GQGKTR
Trigger: ACGCGTCTTGCCTTGTCCCCAACGTTCCACAACAGT...ACTCCGCAAATATCCTCCACTTTCAGGAGGGAAAACCCACCCTACCACAGTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR-3UTR CCA 90 bp ACACAGGTATCAATGCAAATCCCCACGTGGTGGGTGCTGTGTGTGTATTGGAGATCATGCCCAGCCACTTaGCAGATGTGGGAAGCAAAG +
Preference number: 2 (lower is better)
Translates to: TQVSMQIPTWWVLCVYWRSCPAT*QMWEAK
Trigger: CTTTGCTTCCCACATCTGCCAAGTGGCTGGGCATGA...TCTCCAATACACACACAGCACCCACCACGTGGGGATTTGCATTGATACCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483178.2
3UTR-3UTR GCA 90 bp ACAGGTACTAGGGACCCCAAGATGGTTTATCATCTATCATCAGAAGCAAAGGAACGAGGGGAGCAGGCTTaGACCACTTTTGTCCTCTAC +
Preference number: 2 (lower is better)
Translates to: TGTRDPKMVYHLSSEAKERGEQA*TTFVLY
Trigger: GTAGAGGACAAAAGTGGTGCAAGCCTGCTCCCCTCG...TTCCTTTGCTTCTGATGATAGATGATAAACCATCTTGGGGTCCCTAGTACCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483178.2
3UTR-3UTR CCA 90 bp ACAGGTACTAGGGACCCCAAGATGGTTTATCATCTATCATCAGAAGCAAAGGAACAAATCCCCACGTGGTaGGTGCTGTGTGTGTATTGG +
Preference number: 2 (lower is better)
Translates to: TGTRDPKMVYHLSSEAKEQIPTW*VLCVYW
Trigger: CCAATACACACACAGCACCCACCACGTGGGGATTTG...TTCCTTTGCTTCTGATGATAGATGATAAACCATCTTGGGGTCCCTAGTACCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483178.2
3UTR-3UTR GCA 90 bp CCTACCATCCAGCCCCTTCGCTGCATGACCCACGGTCCTAAATTTGCAAATTGTGACAGTGTTCCGTATTaGACGTGCAATTTAACTTTA +
Preference number: 2 (lower is better)
Translates to: PTIQPLRCMTHGPKFANCDSVPY*TCNLTL
Trigger: TAAAGTTAAATTGCACGTGCAATACGGAACACTGTC...ACAATTTGCAAATTTAGGACCGTGGGTCATGCAGCGAAGGGGCTGGATGGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR-3UTR CCA 90 bp GCGGTTCAATGCATTGTGCAGTTCAGAGCCATGACAGGATTTTTCCATGTTGAGTTCACAGACACAAAATaGAATTGCATGGTCACCCCC +
Preference number: 2 (lower is better)
Translates to: AVQCIVQFRAMTGFFHVEFTDTK*NCMVTP
Trigger: GGGGGTGACCATGCAATTCCATTTTGTGTCTGTGAA...CTCAACATGGAAAAATCCTGTCATGGCTCTGAACTGCACAATGCATTGAACCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR-3UTR CCA 90 bp ACAGGTACTAGGGACCCCAAGATGGTTTATCATCTATCATCAGAAGCAAAGGAAATGCAAATCCCCACGTaGTGGGTGCTGTGTGTGTAT +
Preference number: 2 (lower is better)
Translates to: TGTRDPKMVYHLSSEAKEMQIPT*WVLCVY
Trigger: ATACACACACAGCACCCACCACGTGGGGATTTGCAT...TTCCTTTGCTTCTGATGATAGATGATAAACCATCTTGGGGTCCCTAGTACCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483178.2
3UTR-3UTR GCA 90 bp ACGGCGGTTCAATGCATTGTGCAGTTCAGAGCCATGACAGGATTTTTCCATGTTTTTTCCTTCACAAGGTaGAGTCCATTGACAGTGTTC +
Preference number: 2 (lower is better)
Translates to: TAVQCIVQFRAMTGFFHVFSFTR*SPLTVF
Trigger: GAACACTGTCAATGGACTGCACCTTGTGAAGGAAAA...AACATGGAAAAATCCTGTCATGGCTCTGAACTGCACAATGCATTGAACCGCCGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR-3UTR CCA 90 bp ACAGGTACTAGGGACCCCAAGATGGTTTATCATCTATCATCAGAAGCAAAGGAATTAGGCACGGCATCTTaGTTAAGGAGAAGCTTGGTC +
Preference number: 2 (lower is better)
Translates to: TGTRDPKMVYHLSSEAKELGTAS*LRRSLV
Trigger: GACCAAGCTTCTCCTTAACCAAGATGCCGTGCCTAA...TTCCTTTGCTTCTGATGATAGATGATAAACCATCTTGGGGTCCCTAGTACCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483178.2
3UTR-3UTR CCA 90 bp AAGGAAATGCCAAATTTCAACTGGAGGAAACACATATGTAATTTTCCCCATGAAGTGCTGTGTGTGTATTaGAGAGACCTGGGCTGGGCA +
Preference number: 2 (lower is better)
Translates to: KEMPNFNWRKHICNFPHEVLCVY*RDLGWA
Trigger: TGCCCAGCCCAGGTCTCTCCAATACACACACAGCAC...TTCATGGGGAAAATTACATATGTGTTTCCTCCAGTTGAAATTTGGCATTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483178.2
3UTR-3UTR GCA 90 bp AGGCATGTGGGCATAAGCGATATGTTTAAACCTGCAAAACTTTCCTATGATATGCAGAAGCAAAGGAAATaGCAAATTTCAACTGGAGGA +
Preference number: 2 (lower is better)
Translates to: RHVGISDMFKPAKLSYDMQKQRK*QISTGG
Trigger: TCCTCCAGTTGAAATTTGGCATTTCCTTTGCTTCTG...CATATCATAGGAAAGTTTTGCAGGTTTAAACATATCGCTTATGCCCACATGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483178.2
3UTR-3UTR GCA 90 bp GCACACGTAACATGTTCTTACGAAGTTTTCTCGCTGTGTAGAAAATGCTTAAAAGTTCCGTATTGCACGTaGAATTTAACTTTATTAGCA +
Preference number: 2 (lower is better)
Translates to: AHVTCSYEVFSLCRKCLKVPYCT*NLTLLA
Trigger: TGCTAATAAAGTTAAATTGCACGTGCAATACGGAAC...TTTTAAGCATTTTCTACACAGCGAGAAAACTTCGTAAGAACATGTTACGTGTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR CCA 72 bp CTCGGCCCTCGGCACCGGCGCGCGGGGCCTCCGCGGTaGAAATCCGCAAGTCGGCGGCGGGGTCCAATTCAA +
Preference number: 3 (lower is better)
Translates to: LGPRHRRAGPPR*KSASRRRGPIQ
Trigger: TTGAATTGGACCCCGCCGCCGACTTGCGGATTTCCACCGCGGAGGCCCCGCGCGCCGGTGCCGAGGGCCGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR-3UTR CAA 90 bp GTGCGTGGAGAGGCGGGCACATCCCTTCCTACCATCCAGCCCCTTCGCTGCATGGTAGGTCGTGCGCATTaGCCGGGCTCGGTGGCGCCG +
Preference number: 3 (lower is better)
Translates to: VRGEAGTSLPTIQPLRCMVGRAH*PGSVAP
Trigger: CGGCGCCACCGAGCCCGGCAAATGCGCACGACCTAC...CATGCAGCGAAGGGGCTGGATGGTAGGAAGGGATGTGCCCGCCTCTCCACGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR CCA 72 bp CCGCTTCAATCCCCCAGCGGGACTGTTGTGGAACGTTaGGGACAAGGCAAGACGCGTGAAGCCCGATTTCAA +
Preference number: 3 (lower is better)
Translates to: PLQSPSGTVVER*GQGKTREARFQ
Trigger: TTGAAATCGGGCTTCACGCGTCTTGCCTTGTCCCCAACGTTCCACAACAGTCCCGCTGGGGGATTGAAGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR-3UTR CAA 90 bp CCTACCATCCAGCCCCTTCGCTGCATGACCCACGGTCCTAAATTTGCAAATTGTGACTGTTGTGGAACGTaGGGGACAAGGCAAGACGCG +
Preference number: 3 (lower is better)
Translates to: PTIQPLRCMTHGPKFANCDCCGT*GTRQDA
Trigger: CGCGTCTTGCCTTGTCCCCAACGTTCCACAACAGTC...ACAATTTGCAAATTTAGGACCGTGGGTCATGCAGCGAAGGGGCTGGATGGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR TCA 72 bp GGCATCTTGGTTAAGGAGAAGCTTGGTCTAGACCCGTaGTGCTGTAATCCCTGGAATTCTGACCCAAGAGCA +
Preference number: 3 (lower is better)
Translates to: GILVKEKLGLDP*CCNPWNSDPRA
Trigger: TGCTCTTGGGTCAGAATTCCAGGGATTACAGCATCACGGGTCTAGACCAAGCTTCTCCTTAACCAAGATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483178.2
3UTR-3UTR CAA 90 bp AAGGACGGCGGTTCAATGCATTGTGCAGTTCAGAGCCATGACAGGATTTTTCCAGAAAGTGGAGGATATTaGCGGAGTGAAACCGCTTCA +
Preference number: 3 (lower is better)
Translates to: KDGGSMHCAVQSHDRIFPESGGY*RSETAS
Trigger: TGAAGCGGTTTCACTCCGCAAATATCCTCCACTTTC...TGGAAAAATCCTGTCATGGCTCTGAACTGCACAATGCATTGAACCGCCGTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR TCA 72 bp AAATTTGCAAATTGTGACTCTTACCATGAGGCCCACTaGCAGACACCCTGTAGGGATTGTGTCAGGTCCTCA +
Preference number: 3 (lower is better)
Translates to: KFANCDSYHEAH*QTPCRDCVRSS
Trigger: TGAGGACCTGACACAATCCCTACAGGGTGTCTGTCAGTGGGCCTCATGGTAAGAGTCACAATTTGCAAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR-3UTR CAA 90 bp ACGGCGGTTCAATGCATTGTGCAGTTCAGAGCCATGACAGGATTTTTCCATGTTGGGGGAAGTAAGAGCTaGTTAATGTATTTGGGAAGC +
Preference number: 3 (lower is better)
Translates to: TAVQCIVQFRAMTGFFHVGGSKS*LMYLGS
Trigger: GCTTCCCAAATACATTAACAAGCTCTTACTTCCCCC...AACATGGAAAAATCCTGTCATGGCTCTGAACTGCACAATGCATTGAACCGCCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR-3UTR CAA 90 bp AGGCATGTGGGCATAAGCGATATGTTTAAACCTGCAAAACTTTCCTATGATATGGTCATGCCCAGCCACTaGGCAGATGTGGGAAGCAAA +
Preference number: 3 (lower is better)
Translates to: RHVGISDMFKPAKLSYDMVMPSH*ADVGSK
Trigger: TTTGCTTCCCACATCTGCCAAGTGGCTGGGCATGAC...CATATCATAGGAAAGTTTTGCAGGTTTAAACATATCGCTTATGCCCACATGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483178.2
3UTR CCA 72 bp GTAGCAAACACGAGCCTAGTGAATTACAGATCTGTGTaGGCCAGAGGGATTTTGCCACGTAATAATGAAGCT +
Preference number: 3 (lower is better)
Translates to: VANTSLVNYRSV*ARGILPRNNEA
Trigger: AGCTTCATTATTACGTGGCAAAATCCCTCTGGCCCACACAGATCTGTAATTCACTAGGCTCGTGTTTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR-3UTR CAA 90 bp CCCTTAAGCATGTTTTTCCTTCACAAGGTGCAGTCCATTGACAGTGTTCCGTATAGACACAAAATGGAATaGCATGGTCACCCCCTTAGT +
Preference number: 3 (lower is better)
Translates to: PLSMFFLHKVQSIDSVPYRHKME*HGHPLS
Trigger: ACTAAGGGGGTGACCATGCAATTCCATTTTGTGTCT...ATACGGAACACTGTCAATGGACTGCACCTTGTGAAGGAAAAACATGCTTAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR-3UTR CAA 90 bp AATTTGCAAATTGTGACTCTTACCATGAGGCCCACTGACAGACACCCTGTAGGGAGCTTGTTAATGTATTaGGGAAGCACACCTATGTTC +
Preference number: 3 (lower is better)
Translates to: NLQIVTLTMRPTDRHPVGSLLMY*GSTPMF
Trigger: GAACATAGGTGTGCTTCCCAAATACATTAACAAGCT...CCCTACAGGGTGTCTGTCAGTGGGCCTCATGGTAAGAGTCACAATTTGCAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR TCA 72 bp TGGGCCAGAGGGATTTTGCCACGTAATAATGAAGCTTaGCAGGGTCATTCTCATAAACTGTCTGGCTACATA +
Preference number: 3 (lower is better)
Translates to: WARGILPRNNEA*QGHSHKLSGYI
Trigger: TATGTAGCCAGACAGTTTATGAGAATGACCCTGTCAAGCTTCATTATTACGTGGCAAAATCCCTCTGGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR TCA 72 bp GGACGGCGGTTCAATGCATTGTGCAGTTCAGAGCCATaGCAGGATTTTTCCATGTTGAGATCTTTAAGCAAA +
Preference number: 3 (lower is better)
Translates to: GRRFNALCSSEP*QDFSMLRSLSK
Trigger: TTTGCTTAAAGATCTCAACATGGAAAAATCCTGTCATGGCTCTGAACTGCACAATGCATTGAACCGCCGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR CCA 72 bp TTGTTGGCAAAGCCACAGGTACTAGGGACCCCAAGATaGTTTATCATCTATCATCAGAAGCAAAGGAAATGC +
Preference number: 3 (lower is better)
Translates to: LLAKPQVLGTPR*FIIYHQKQRKC
Trigger: GCATTTCCTTTGCTTCTGATGATAGATGATAAACCATCTTGGGGTCCCTAGTACCTGTGGCTTTGCCAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483178.2
3UTR GCA 72 bp CTTGATGAATATTGGCTTAAAAGACACAGGTATCAATaGAAATCCCCACGTGGTGGGTGCTGTGTGTGTATT +
Preference number: 3 (lower is better)
Translates to: LDEYWLKRHRYQ*KSPRGGCCVCI
Trigger: AATACACACACAGCACCCACCACGTGGGGATTTGCATTGATACCTGTGTCTTTTAAGCCAATATTCATCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483178.2
3UTR CCA 72 bp TATTTGGGAAGCACACCTATGTTCACAGACACAAAATaGAATTGCATGGTCACCCCCTTAGTCTTGGTTTGT +
Preference number: 3 (lower is better)
Translates to: YLGSTPMFTDTK*NCMVTPLVLVC
Trigger: ACAAACCAAGACTAAGGGGGTGACCATGCAATTCCATTTTGTGTCTGTGAACATAGGTGTGCTTCCCAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR TCA 72 bp CTTAAGCATGTTTTTCCTTCACAAGGTGCAGTCCATTaGCAGTGTTCCGTATTGCACGTGCAATTTAACTTT +
Preference number: 3 (lower is better)
Translates to: LKHVFPSQGAVH*QCSVLHVQFNF
Trigger: AAAGTTAAATTGCACGTGCAATACGGAACACTGTCAATGGACTGCACCTTGTGAAGGAAAAACATGCTTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR GCA 72 bp CTTCACAAGGTGCAGTCCATTGACAGTGTTCCGTATTaGACGTGCAATTTAACTTTATTAGCACTATTTGTA +
Preference number: 3 (lower is better)
Translates to: LHKVQSIDSVPY*TCNLTLLALFV
Trigger: TACAAATAGTGCTAATAAAGTTAAATTGCACGTGCAATACGGAACACTGTCAATGGACTGCACCTTGTGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp CCCTCGGCACCGGCGCGCGGGGCCTCCGCGGTGGAAATCCGCAAGTCGGCGGCGGTGGCCGCGGAGCCATaGAGCGGGAGCCCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: PSAPARGASAVEIRKSAAVAAEP*SGSPAE
Trigger: CTCCGCTGGGCTCCCGCTCCATGGCTCCGCGGCCAC...CGCCGCCGACTTGCGGATTTCCACCGCGGAGGCCCCGCGCGCCGGTGCCGAGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp CCCTCGGCACCGGCGCGCGGGGCCTCCGCGGTGGAAATCCGCAAGTCGGCGGCGCGCTTGCAGGGGGACTaGCTCTCCAGTTTCCGAGCT +
Preference number: 4 (lower is better)
Translates to: PSAPARGASAVEIRKSAARLQGD*LSSFRA
Trigger: AGCTCGGAAACTGGAGAGCCAGTCCCCCTGCAAGCG...CGCCGCCGACTTGCGGATTTCCACCGCGGAGGCCCCGCGCGCCGGTGCCGAGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp AAGCCCCCAGCAACTGGGTCGCACCGGCCCTCGCAGGACAGAGGCGGGCGGTCAGCGGGGCCTCCGCGGTaGAAATCCGCAAGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: KPPATGSHRPSQDRGGRSAGPPR*KSASRR
Trigger: CCGCCGACTTGCGGATTTCCACCGCGGAGGCCCCGC...TGACCGCCCGCCTCTGTCCTGCGAGGGCCGGTGCGACCCAGTTGCTGGGGGCTT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR TCA 90 bp CCCTCGGCACCGGCGCGCGGGGCCTCCGCGGTGGAAATCCGCAAGTCGGCGGCGAAGGTCACTGCTTTCTaGGTGGGGCTGCAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: PSAPARGASAVEIRKSAAKVTAF*VGLQFW
Trigger: CCAGAACTGCAGCCCCACTCAGAAAGCAGTGACCTT...CGCCGCCGACTTGCGGATTTCCACCGCGGAGGCCCCGCGCGCCGGTGCCGAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR GCA 90 bp AAGCCCCCAGCAACTGGGTCGCACCGGCCCTCGCAGGACAGAGGCGGGCGGTCAGGGGATCCTTGGGGCTaGCCGAACTTGGCCGGCAAC +
Preference number: 4 (lower is better)
Translates to: KPPATGSHRPSQDRGGRSGDPWG*PNLAGN
Trigger: GTTGCCGGCCAAGTTCGGGCAGCCCCAAGGATCCCC...TGACCGCCCGCCTCTGTCCTGCGAGGGCCGGTGCGACCCAGTTGCTGGGGGCTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp GCTCCTCGGCCCTCGGCACCGGCGCGCGGGGCCTCCGCGGTGGAAATCCGCAAGACTGGCATTCACCGCTaGCTGGCAGTGTGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: APRPSAPARGASAVEIRKTGIHR*LAVCSG
Trigger: TCCTGAGCACACTGCCAGCCAGCGGTGAATGCCAGT...CTTGCGGATTTCCACCGCGGAGGCCCCGCGCGCCGGTGCCGAGGGCCGAGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp GGACAGAGGCGGGCGGTCACCTGCCCGGACCCGGGCGCTCCTCGGCCCTCGGCATCTCCCTCCTGGTCTTaGCCGCATTCTTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: GQRRAVTCPDPGAPRPSASPSWS*PHSWTS
Trigger: AGAAGTCCAAGAATGCGGCCAAGACCAGGAGGGAGA...TGCCGAGGGCCGAGGAGCGCCCGGGTCCGGGCAGGTGACCGCCCGCCTCTGTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp CCCTCGGCACCGGCGCGCGGGGCCTCCGCGGTGGAAATCCGCAAGTCGGCGGCGCGGACTGTGGTAGGGTaGGTTTTCCCTCCTGAAAGT +
Preference number: 4 (lower is better)
Translates to: PSAPARGASAVEIRKSAARTVVG*VFPPES
Trigger: ACTTTCAGGAGGGAAAACCCACCCTACCACAGTCCG...CGCCGCCGACTTGCGGATTTCCACCGCGGAGGCCCCGCGCGCCGGTGCCGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp CCCTCGGCACCGGCGCGCGGGGCCTCCGCGGTGGAAATCCGCAAGTCGGCGGCGTCACCTCGGTCACCCTaGAATCCAGGAATATCAGCT +
Preference number: 4 (lower is better)
Translates to: PSAPARGASAVEIRKSAASPRSP*NPGISA
Trigger: AGCTGATATTCCTGGATTCCAGGGTGACCGAGGTGA...CGCCGCCGACTTGCGGATTTCCACCGCGGAGGCCCCGCGCGCCGGTGCCGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR TCA 90 bp GCTCCTCGGCCCTCGGCACCGGCGCGCGGGGCCTCCGCGGTGGAAATCCGCAAGCAAGGTGCAGTCCATTaGCAGTGTTCCGTATTGCAC +
Preference number: 4 (lower is better)
Translates to: APRPSAPARGASAVEIRKQGAVH*QCSVLH
Trigger: GTGCAATACGGAACACTGTCAATGGACTGCACCTTG...CTTGCGGATTTCCACCGCGGAGGCCCCGCGCGCCGGTGCCGAGGGCCGAGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp CTGAGTGCGTGGAGAGGCGGGCACATCCCTTCCTACCATCCAGCCCCTTCGCTGTGGTGCAGCGGCTGGTaGGCCGTGAGGACAGCGGTC +
Preference number: 4 (lower is better)
Translates to: LSAWRGGHIPSYHPAPSLWCSGW*AVRTAV
Trigger: GACCGCTGTCCTCACGGCCCACCAGCCGCTGCACCA...CAGCGAAGGGGCTGGATGGTAGGAAGGGATGTGCCCGCCTCTCCACGCACTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp AACCAAGCCCCCAGCAACTGGGTCGCACCGGCCCTCGCAGGACAGAGGCGGGCGCTCCAGTTTCCGAGCTaGCCGCATTCCAGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: NQAPSNWVAPALAGQRRALQFPS*PHSSLS
Trigger: GGACAAACTGGAATGCGGCCAGCTCGGAAACTGGAG...CGCCCGCCTCTGTCCTGCGAGGGCCGGTGCGACCCAGTTGCTGGGGGCTTGGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp AAGCCCCCAGCAACTGGGTCGCACCGGCCCTCGCAGGACAGAGGCGGGCGGTCAGGGCAGGCTGTAGGATaGCGTGTACAGAAGGTCACT +
Preference number: 4 (lower is better)
Translates to: KPPATGSHRPSQDRGGRSGQAVG*RVQKVT
Trigger: AGTGACCTTCTGTACACGCCATCCTACAGCCTGCCC...TGACCGCCCGCCTCTGTCCTGCGAGGGCCGGTGCGACCCAGTTGCTGGGGGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR GCA 90 bp GGACAGAGGCGGGCGGTCACCTGCCCGGACCCGGGCGCTCCTCGGCCCTCGGCAAAAGTGGAGGATATTTaGGGAGTGAAACCGCTTCAA +
Preference number: 4 (lower is better)
Translates to: GQRRAVTCPDPGAPRPSAKVEDI*GVKPLQ
Trigger: TTGAAGCGGTTTCACTCCGCAAATATCCTCCACTTT...TGCCGAGGGCCGAGGAGCGCCCGGGTCCGGGCAGGTGACCGCCCGCCTCTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp AAGCCCCCAGCAACTGGGTCGCACCGGCCCTCGCAGGACAGAGGCGGGCGGTCAGCATTCACCGCTGGCTaGCAGTGTGCTCAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: KPPATGSHRPSQDRGGRSAFTAG*QCAQEK
Trigger: TTTTTCCTGAGCACACTGCCAGCCAGCGGTGAATGC...TGACCGCCCGCCTCTGTCCTGCGAGGGCCGGTGCGACCCAGTTGCTGGGGGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR GCA 90 bp AACCAAGCCCCCAGCAACTGGGTCGCACCGGCCCTCGCAGGACAGAGGCGGGCGTGTACAGAAGGTCACTaGTTTCTGAGTGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: NQAPSNWVAPALAGQRRACTEGH*FLSGAA
Trigger: TGCAGCCCCACTCAGAAAGCAGTGACCTTCTGTACA...CGCCCGCCTCTGTCCTGCGAGGGCCGGTGCGACCCAGTTGCTGGGGGCTTGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR GCA 90 bp CCCTCGGCACCGGCGCGCGGGGCCTCCGCGGTGGAAATCCGCAAGTCGGCGGCGGATAAAGCAGCAAAATaGTGCAGTGTTGATAGTGTG +
Preference number: 4 (lower is better)
Translates to: PSAPARGASAVEIRKSAADKAAK*CSVDSV
Trigger: CACACTATCAACACTGCAGCATTTTGCTGCTTTATC...CGCCGCCGACTTGCGGATTTCCACCGCGGAGGCCCCGCGCGCCGGTGCCGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR TCA 90 bp AACCAAGCCCCCAGCAACTGGGTCGCACCGGCCCTCGCAGGACAGAGGCGGGCGTTTCCTAGTTTCTTGTaGGGTAGACAAGGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: NQAPSNWVAPALAGQRRAFPSFL*GRQGGP
Trigger: AGGACCGCCTTGTCTACCTCACAAGAAACTAGGAAA...CGCCCGCCTCTGTCCTGCGAGGGCCGGTGCGACCCAGTTGCTGGGGGCTTGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR GCA 90 bp CGGACTGTGGTAGGGTGGGTTTTCCCTCCTGAAAGTGGAGGATATTTGCGGAGTCCGGGCGCGCTCTCCTaGCCTTCCTGGCGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: RTVVGWVFPPESGGYLRSPGALS*PSWRLP
Trigger: AGGGAGCCGCCAGGAAGGGCAGGAGAGCGCGCCCGG...ACTCCGCAAATATCCTCCACTTTCAGGAGGGAAAACCCACCCTACCACAGTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR CAA 72 bp GTGACACAGGCGTCCCCTCCCAGGTCTGCCGTCCACTaGGAAGAGCGGACTGTGGTAGGGTGGGTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: VTQASPPRSAVH*EERTVVGWVFP
Trigger: AGGGAAAACCCACCCTACCACAGTCCGCTCTTCCAAGTGGACGGCAGACCTGGGAGGGGACGCCTGTGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR GCA 90 bp GGACAGAGGCGGGCGGTCACCTGCCCGGACCCGGGCGCTCCTCGGCCCTCGGCAGTTCCGTATTGCACGTaGAATTTAACTTTATTAGCA +
Preference number: 4 (lower is better)
Translates to: GQRRAVTCPDPGAPRPSAVPYCT*NLTLLA
Trigger: TGCTAATAAAGTTAAATTGCACGTGCAATACGGAAC...TGCCGAGGGCCGAGGAGCGCCCGGGTCCGGGCAGGTGACCGCCCGCCTCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp CGGACTGTGGTAGGGTGGGTTTTCCCTCCTGAAAGTGGAGGATATTTGCGGAGTGCGATCCCAGCTCCTTaGCGACGCCGTCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: RTVVGWVFPPESGGYLRSAIPAP*RRRPGA
Trigger: GGCCCCTGGACGGCGTCGCCAAGGAGCTGGGATCGC...ACTCCGCAAATATCCTCCACTTTCAGGAGGGAAAACCCACCCTACCACAGTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp TCTAAAAGGGCTCGTGACACAGGCGTCCCCTCCCAGGTCTGCCGTCCACTTGGATCACAAGGGGATCCTTaGGGCTGCCCGAACTTGGCC +
Preference number: 4 (lower is better)
Translates to: SKRARDTGVPSQVCRPLGSQGDP*GCPNLA
Trigger: GGCCAAGTTCGGGCAGCCCCAAGGATCCCCTTGTGA...TCCAAGTGGACGGCAGACCTGGGAGGGGACGCCTGTGTCACGAGCCCTTTTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR TCA 90 bp GTGGAAATCCGCAAGTCGGCGGCGGGGTCCAATTCAAACAGCTGTCTCTGCATATGTCCAGCTGCGAAGTaGTGGCCGACGGCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: VEIRKSAAGSNSNSCLCICPAAK*WPTAAG
Trigger: TCCCGCTGCCGTCGGCCATCACTTCGCAGCTGGACA...TATGCAGAGACAGCTGTTTGAATTGGACCCCGCCGCCGACTTGCGGATTTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR GCA 90 bp CTGAAAGTGGAGGATATTTGCGGAGTGAAACCGCTTCAATCCCCCAGCGGGACTCGGGCTGGACCGTCCTaGAGCAACCGGAGCCCCGTT +
Preference number: 4 (lower is better)
Translates to: LKVEDICGVKPLQSPSGTRAGPS*SNRSPV
Trigger: AACGGGGCTCCGGTTGCTGCAGGACGGTCCAGCCCG...AGTCCCGCTGGGGGATTGAAGCGGTTTCACTCCGCAAATATCCTCCACTTTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp CTGAAAGTGGAGGATATTTGCGGAGTGAAACCGCTTCAATCCCCCAGCGGGACTCAGCCTCCTCCGGGCTaGACCGTCCTGCAGCAACCG +
Preference number: 4 (lower is better)
Translates to: LKVEDICGVKPLQSPSGTQPPPG*TVLQQP
Trigger: CGGTTGCTGCAGGACGGTCCAGCCCGGAGGAGGCTG...AGTCCCGCTGGGGGATTGAAGCGGTTTCACTCCGCAAATATCCTCCACTTTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp GTGCGTGGAGAGGCGGGCACATCCCTTCCTACCATCCAGCCCCTTCGCTGCATGTCTTGGCCGCATTCTTaGACTTCTCCTTCATCGCGC +
Preference number: 4 (lower is better)
Translates to: VRGEAGTSLPTIQPLRCMSWPHS*TSPSSR
Trigger: GCGCGATGAAGGAGAAGTCCAAGAATGCGGCCAAGA...CATGCAGCGAAGGGGCTGGATGGTAGGAAGGGATGTGCCCGCCTCTCCACGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp GTGCGTGGAGAGGCGGGCACATCCCTTCCTACCATCCAGCCCCTTCGCTGCATGACTGTTGTGGAACGTTaGGGACAAGGCAAGACGCGT +
Preference number: 4 (lower is better)
Translates to: VRGEAGTSLPTIQPLRCMTVVER*GQGKTR
Trigger: ACGCGTCTTGCCTTGTCCCCAACGTTCCACAACAGT...CATGCAGCGAAGGGGCTGGATGGTAGGAAGGGATGTGCCCGCCTCTCCACGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR GCA 90 bp GCGGGACTGTTGTGGAACGTTGGGGACAAGGCAAGACGCGTGAAGCCCGATTTCAAAGTCTGCAGCAAGTaGGATCCCAGCTCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: AGLLWNVGDKARRVKPDFKVCSK*DPSSLA
Trigger: CGCCAAGGAGCTGGGATCGCACTTGCTGCAGACTTT...GAAATCGGGCTTCACGCGTCTTGCCTTGTCCCCAACGTTCCACAACAGTCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp ACTCTTACCATGAGGCCCACTGACAGACACCCTGTAGGGATTGTGTCAGGTCCTGTGGGGCTGCAGTTCTaGAGGAGCAGCAGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: TLTMRPTDRHPVGIVSGPVGLQF*RSSSAC
Trigger: GCAAGCGCTGCTGCTCCTCCAGAACTGCAGCCCCAC...AGGACCTGACACAATCCCTACAGGGTGTCTGTCAGTGGGCCTCATGGTAAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR TCA 90 bp ACACAGGTATCAATGCAAATCCCCACGTGGTGGGTGCTGTGTGTGTATTGGAGAGCGGCTGGTGGGCCGTaGGGACAGCGGTCATCTCAT +
Preference number: 4 (lower is better)
Translates to: TQVSMQIPTWWVLCVYWRAAGGP*GQRSSH
Trigger: ATGAGATGACCGCTGTCCTCACGGCCCACCAGCCGC...TCTCCAATACACACACAGCACCCACCACGTGGGGATTTGCATTGATACCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483178.2
CDS-3UTR TCA 90 bp TCTAAAAGGGCTCGTGACACAGGCGTCCCCTCCCAGGTCTGCCGTCCACTTGGAAGGATATTTGCGGAGTaGAACCGCTTCAATCCCCCA +
Preference number: 4 (lower is better)
Translates to: SKRARDTGVPSQVCRPLGRIFAE*NRFNPP
Trigger: TGGGGGATTGAAGCGGTTTCACTCCGCAAATATCCT...TCCAAGTGGACGGCAGACCTGGGAGGGGACGCCTGTGTCACGAGCCCTTTTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR GCA 90 bp AACCAAGCCCCCAGCAACTGGGTCGCACCGGCCCTCGCAGGACAGAGGCGGGCGTTTCTGTTTACCTGTTaGACACGTAACATGTTCTTA +
Preference number: 4 (lower is better)
Translates to: NQAPSNWVAPALAGQRRAFLFTC*TRNMFL
Trigger: TAAGAACATGTTACGTGTGCAACAGGTAAACAGAAA...CGCCCGCCTCTGTCCTGCGAGGGCCGGTGCGACCCAGTTGCTGGGGGCTTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR GCA 90 bp CCTGGAATTCTGACCCAAGAGCACGAGGGGAGCAGGCTTGCACCACTTTTGTCCTCCCCACGTGGTGGGTaGTGTGTGTGTATTGGAGAG +
Preference number: 4 (lower is better)
Translates to: PGILTQEHEGSRLAPLLSSPRGG*CVCIGE
Trigger: CTCTCCAATACACACACAGCACCCACCACGTGGGGA...GGACAAAAGTGGTGCAAGCCTGCTCCCCTCGTGCTCTTGGGTCAGAATTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483178.2
CDS-3UTR CCA 90 bp AATTTGCAAATTGTGACTCTTACCATGAGGCCCACTGACAGACACCCTGTAGGGGGAGCCCGCGATGTGTaGCTAGGCGCAGCACCTCCG +
Preference number: 4 (lower is better)
Translates to: NLQIVTLTMRPTDRHPVGGARDV*LGAAPP
Trigger: CGGAGGTGCTGCGCCTAGCCACACATCGCGGGCTCC...CCCTACAGGGTGTCTGTCAGTGGGCCTCATGGTAAGAGTCACAATTTGCAAATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp GGTGGGTTTTCCCTCCTGAAAGTGGAGGATATTTGCGGAGTGAAACCGCTTCAAACACTCACGATGCAGTaGGGCCGGGACGAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GGFSLLKVEDICGVKPLQTLTMQ*GRDERL
Trigger: CAGCCGCTCGTCCCGGCCCCACTGCATCGTGAGTGT...TTGAAGCGGTTTCACTCCGCAAATATCCTCCACTTTCAGGAGGGAAAACCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp GTGCGTGGAGAGGCGGGCACATCCCTTCCTACCATCCAGCCCCTTCGCTGCATGTTCACAGACACAAAATaGAATTGCATGGTCACCCCC +
Preference number: 4 (lower is better)
Translates to: VRGEAGTSLPTIQPLRCMFTDTK*NCMVTP
Trigger: GGGGGTGACCATGCAATTCCATTTTGTGTCTGTGAA...CATGCAGCGAAGGGGCTGGATGGTAGGAAGGGATGTGCCCGCCTCTCCACGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp CCTGGAATTCTGACCCAAGAGCACGAGGGGAGCAGGCTTGCACCACTTTTGTCCCTGGATGGAATACCTTaGAGCAGGTGGTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: PGILTQEHEGSRLAPLLSLDGIP*SRWWCS
Trigger: GCTGCACCACCACCTGCTCCAAGGTATTCCATCCAG...GGACAAAAGTGGTGCAAGCCTGCTCCCCTCGTGCTCTTGGGTCAGAATTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483178.2
CDS-3UTR TCA 90 bp CTGAGTGCGTGGAGAGGCGGGCACATCCCTTCCTACCATCCAGCCCCTTCGCTGAGTAACCTTTGTTATTaGACTGCTCCGATAGCCTTG +
Preference number: 4 (lower is better)
Translates to: LSAWRGGHIPSYHPAPSLSNLCY*TAPIAL
Trigger: CAAGGCTATCGGAGCAGTTCAATAACAAAGGTTACT...CAGCGAAGGGGCTGGATGGTAGGAAGGGATGTGCCCGCCTCTCCACGCACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR GCA 90 bp AAGGACGGCGGTTCAATGCATTGTGCAGTTCAGAGCCATGACAGGATTTTTCCACCGGAGCCCCGTTCCTaGTCGCTCCTGTTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: KDGGSMHCAVQSHDRIFPPEPRS*SLLFPP
Trigger: GGGAGGAAACAGGAGCGAGCAGGAACGGGGCTCCGG...TGGAAAAATCCTGTCATGGCTCTGAACTGCACAATGCATTGAACCGCCGTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp CCTGGAATTCTGACCCAAGAGCACGAGGGGAGCAGGCTTGCACCACTTTTGTCCCCCGTGAGCTCCACCTaGGATAAGCCTAAATGGACA +
Preference number: 4 (lower is better)
Translates to: PGILTQEHEGSRLAPLLSPVSST*DKPKWT
Trigger: TGTCCATTTAGGCTTATCCCAGGTGGAGCTCACGGG...GGACAAAAGTGGTGCAAGCCTGCTCCCCTCGTGCTCTTGGGTCAGAATTCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000483178.2
CDS-3UTR CCA 90 bp AAGGACGGCGGTTCAATGCATTGTGCAGTTCAGAGCCATGACAGGATTTTTCCACCCAGCCGCCCCGCTTaGACAGCAGCCGGTAGTACT +
Preference number: 4 (lower is better)
Translates to: KDGGSMHCAVQSHDRIFPPSRPA*TAAGST
Trigger: AGTACTACCGGCTGCTGTCCAAGCGGGGCGGCTGGG...TGGAAAAATCCTGTCATGGCTCTGAACTGCACAATGCATTGAACCGCCGTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp GCGGGACTGTTGTGGAACGTTGGGGACAAGGCAAGACGCGTGAAGCCCGATTTCCTTGGCCGGCAACATTaGCTTTTTGCTGCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: AGLLWNVGDKARRVKPDFLGRQH*LFAAED
Trigger: GTCTTCAGCAGCAAAAAGCCAATGTTGCCGGCCAAG...GAAATCGGGCTTCACGCGTCTTGCCTTGTCCCCAACGTTCCACAACAGTCCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp CTGAAAGTGGAGGATATTTGCGGAGTGAAACCGCTTCAATCCCCCAGCGGGACTGGGGCTGCCCGAACTTaGCCGGCAACATTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: LKVEDICGVKPLQSPSGTGAART*PATLAF
Trigger: AAAAGCCAATGTTGCCGGCCAAGTTCGGGCAGCCCC...AGTCCCGCTGGGGGATTGAAGCGGTTTCACTCCGCAAATATCCTCCACTTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290399.11
3UTR CAA 72 bp GTAGGGTGGGTTTTCCCTCCTGAAAGTGGAGGATATTaGCGGAGTGAAACCGCTTCAATCCCCCAGCGGGAC +
Preference number: 4 (lower is better)
Translates to: VGWVFPPESGGY*RSETASIPQRD
Trigger: GTCCCGCTGGGGGATTGAAGCGGTTTCACTCCGCAAATATCCTCCACTTTCAGGAGGGAAAACCCACCCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR TCA 90 bp CTGAAAGTGGAGGATATTTGCGGAGTGAAACCGCTTCAATCCCCCAGCGGGACTTACCATGAGGCCCACTaGCAGACACCCTGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: LKVEDICGVKPLQSPSGTYHEAH*QTPCRD
Trigger: ATCCCTACAGGGTGTCTGTCAGTGGGCCTCATGGTA...AGTCCCGCTGGGGGATTGAAGCGGTTTCACTCCGCAAATATCCTCCACTTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR GCA 90 bp GGTGGGTTTTCCCTCCTGAAAGTGGAGGATATTTGCGGAGTGAAACCGCTTCAACTTGGCACCAGGCTGTaGCTAGCAGTGTTCGCCGGT +
Preference number: 4 (lower is better)
Translates to: GGFSLLKVEDICGVKPLQLGTRL*LAVFAG
Trigger: ACCGGCGAACACTGCTAGGCACAGCCTGGTGCCAAG...TTGAAGCGGTTTCACTCCGCAAATATCCTCCACTTTCAGGAGGGAAAACCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp ATGGAATTGCATGGTCACCCCCTTAGTCTTGGTTTGTTGGCTTTTTGTATTGAAGCGGCTCCCTGTGCCTaGAGACGCAGCGCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: MELHGHPLSLGLLAFCIEAAPCA*RRSAGA
Trigger: GGCTCCGGCGCTGCGTCTCCAGGCACAGGGAGCCGC...TTCAATACAAAAAGCCAACAAACCAAGACTAAGGGGGTGACCATGCAATTCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp GATGAATATTGGCTTAAAAGACACAGGTATCAATGCAAATCCCCACGTGGTGGGTGGTGGTGCAGCGGCTaGTGGGCCGTGAGGACAGCG +
Preference number: 4 (lower is better)
Translates to: DEYWLKRHRYQCKSPRGGWWCSG*WAVRTA
Trigger: CGCTGTCCTCACGGCCCACCAGCCGCTGCACCACCA...CCCACCACGTGGGGATTTGCATTGATACCTGTGTCTTTTAAGCCAATATTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483178.2
CDS-3UTR CCA 90 bp CCTGGAATTCTGACCCAAGAGCACGAGGGGAGCAGGCTTGCACCACTTTTGTCCATGCAAATCCCCACGTaGTGGGTGCTGTGTGTGTAT +
Preference number: 4 (lower is better)
Translates to: PGILTQEHEGSRLAPLLSMQIPT*WVLCVY
Trigger: ATACACACACAGCACCCACCACGTGGGGATTTGCAT...GGACAAAAGTGGTGCAAGCCTGCTCCCCTCGTGCTCTTGGGTCAGAATTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483178.2
CDS-3UTR TCA 90 bp GTGGAAATCCGCAAGTCGGCGGCGGGGTCCAATTCAAACAGCTGTCTCTGCATAGTGGGTTTTCCCTCCTaGAAGTGGAGGATATTTGCG +
Preference number: 4 (lower is better)
Translates to: VEIRKSAAGSNSNSCLCIVGFPS*KWRIFA
Trigger: CGCAAATATCCTCCACTTTCAGGAGGGAAAACCCAC...TATGCAGAGACAGCTGTTTGAATTGGACCCCGCCGCCGACTTGCGGATTTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR GCA 90 bp GCGGTTCAATGCATTGTGCAGTTCAGAGCCATGACAGGATTTTTCCATGTTGAGGTCCCCTCCCAGGTCTaGCGTCCACTTGGAAGAGCG +
Preference number: 4 (lower is better)
Translates to: AVQCIVQFRAMTGFFHVEVPSQV*RPLGRA
Trigger: CGCTCTTCCAAGTGGACGGCAGACCTGGGAGGGGAC...CTCAACATGGAAAAATCCTGTCATGGCTCTGAACTGCACAATGCATTGAACCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp GGTGGGTTTTCCCTCCTGAAAGTGGAGGATATTTGCGGAGTGAAACCGCTTCAAGCAGCGGGAGCAGCTTaGCAAGCTCGTAAAACTCGC +
Preference number: 4 (lower is better)
Translates to: GGFSLLKVEDICGVKPLQAAGAA*QARKTR
Trigger: GCGAGTTTTACGAGCTTGCCAAGCTGCTCCCGCTGC...TTGAAGCGGTTTCACTCCGCAAATATCCTCCACTTTCAGGAGGGAAAACCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp CCTGGAATTCTGACCCAAGAGCACGAGGGGAGCAGGCTTGCACCACTTTTGTCCTGGGATAAGCCTAAATaGACAGAAGCGGTCTCGGAT +
Preference number: 4 (lower is better)
Translates to: PGILTQEHEGSRLAPLLSWDKPK*TEAVSD
Trigger: ATCCGAGACCGCTTCTGTCCATTTAGGCTTATCCCA...GGACAAAAGTGGTGCAAGCCTGCTCCCCTCGTGCTCTTGGGTCAGAATTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483178.2
CDS-3UTR CCA 90 bp ACAGGTACTAGGGACCCCAAGATGGTTTATCATCTATCATCAGAAGCAAAGGAATGGTGCAGCGGCTGGTaGGCCGTGAGGACAGCGGTC +
Preference number: 4 (lower is better)
Translates to: TGTRDPKMVYHLSSEAKEWCSGW*AVRTAV
Trigger: GACCGCTGTCCTCACGGCCCACCAGCCGCTGCACCA...TTCCTTTGCTTCTGATGATAGATGATAAACCATCTTGGGGTCCCTAGTACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483178.2
CDS-3UTR CCA 90 bp TCTAAAAGGGCTCGTGACACAGGCGTCCCCTCCCAGGTCTGCCGTCCACTTGGATCCAGTTTGTCCATTTaGAACGAGCTGTATTGCTGT +
Preference number: 4 (lower is better)
Translates to: SKRARDTGVPSQVCRPLGSSLSI*NELYCC
Trigger: ACAGCAATACAGCTCGTTCCAAATGGACAAACTGGA...TCCAAGTGGACGGCAGACCTGGGAGGGGACGCCTGTGTCACGAGCCCTTTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp GCGGTTCAATGCATTGTGCAGTTCAGAGCCATGACAGGATTTTTCCATGTTGAGGGGCGCTTCGTAGCTTaGCACCAGGCTGTGCCTAGC +
Preference number: 4 (lower is better)
Translates to: AVQCIVQFRAMTGFFHVEGRFVA*HQAVPS
Trigger: GCTAGGCACAGCCTGGTGCCAAGCTACGAAGCGCCC...CTCAACATGGAAAAATCCTGTCATGGCTCTGAACTGCACAATGCATTGAACCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp ACAGTGGAGTTGTGTATTCATGGGACTTACAATCATCACTTCTGCCTTCACCTACAAGCCCCCAGCAACTaGGTCGCACCGGCCCTCGCA +
Preference number: 4 (lower is better)
Translates to: TVELCIHGTYNHHFCLHLQAPSN*VAPALA
Trigger: TGCGAGGGCCGGTGCGACCCAGTTGCTGGGGGCTTG...TAGGTGAAGGCAGAAGTGATGATTGTAAGTCCCATGAATACACAACTCCACTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR TCA 90 bp ATGCCTATTCAATATATTCTGAAGGTGCTACTCTTGGTGTTATCAAGAGTTCATGAGCCGGGAGCCAGGTaGGTCCGCGGAGTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: MPIQYILKVLLLVLSRVHEPGAR*VRGVGR
Trigger: GCGGCCCACTCCGCGGACTCACCTGGCTCCCGGCTC...ATGAACTCTTGATAACACCAAGAGTAGCACCTTCAGAATATATTGAATAGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR TCA 90 bp ACACAGGCGTCCCCTCCCAGGTCTGCCGTCCACTTGGAAGAGCGGACTGTGGTATCTCGGATATATACATaGTTTTGCCATCAGATGCTA +
Preference number: 4 (lower is better)
Translates to: TQASPPRSAVHLEERTVVSRIYT*FCHQML
Trigger: TAGCATCTGATGGCAAAATCATGTATATATCCGAGA...TACCACAGTCCGCTCTTCCAAGTGGACGGCAGACCTGGGAGGGGACGCCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR TCA 90 bp TGGAATTGCATGGTCACCCCCTTAGTCTTGGTTTGTTGGCTTTTTGTATTGAAGGCGGCTGGTGGGCCGTaGGGACAGCGGTCATCTCAT +
Preference number: 4 (lower is better)
Translates to: WNCMVTPLVLVCWLFVLKAAGGP*GQRSSH
Trigger: ATGAGATGACCGCTGTCCTCACGGCCCACCAGCCGC...CTTCAATACAAAAAGCCAACAAACCAAGACTAAGGGGGTGACCATGCAATTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR GCA 90 bp TGGAATTGCATGGTCACCCCCTTAGTCTTGGTTTGTTGGCTTTTTGTATTGAAGCCTCCGCTGTCCACGTaGGGCCGAGCCGCGTTTGTT +
Preference number: 4 (lower is better)
Translates to: WNCMVTPLVLVCWLFVLKPPLST*GRAAFV
Trigger: AACAAACGCGGCTCGGCCGCACGTGGACAGCGGAGG...CTTCAATACAAAAAGCCAACAAACCAAGACTAAGGGGGTGACCATGCAATTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR GCA 90 bp ATGGAATTGCATGGTCACCCCCTTAGTCTTGGTTTGTTGGCTTTTTGTATTGAAAGTGCTCGAACCGGCTaGGGCAAGGCCCCTCCGGAC +
Preference number: 4 (lower is better)
Translates to: MELHGHPLSLGLLAFCIESARTG*GKAPPD
Trigger: GTCCGGAGGGGCCTTGCCGCAGCCGGTTCGAGCACT...TTCAATACAAAAAGCCAACAAACCAAGACTAAGGGGGTGACCATGCAATTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR GCA 90 bp AATTTGCAAATTGTGACTCTTACCATGAGGCCCACTGACAGACACCCTGTAGGGCGCTGGCTGGCAGTGTaGTCAGGAAAAAGCGTGCCA +
Preference number: 4 (lower is better)
Translates to: NLQIVTLTMRPTDRHPVGRWLAV*SGKSVP
Trigger: TGGCACGCTTTTTCCTGAGCACACTGCCAGCCAGCG...CCCTACAGGGTGTCTGTCAGTGGGCCTCATGGTAAGAGTCACAATTTGCAAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR GCA 90 bp TCTAAAAGGGCTCGTGACACAGGCGTCCCCTCCCAGGTCTGCCGTCCACTTGGAAAAGCAGCAAAATGCTaGAGTGTTGATAGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: SKRARDTGVPSQVCRPLGKAAKC*SVDSVK
Trigger: CTTCACACTATCAACACTGCAGCATTTTGCTGCTTT...TCCAAGTGGACGGCAGACCTGGGAGGGGACGCCTGTGTCACGAGCCCTTTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp CGTTGGGGACAAGGCAAGACGCGTGAAGCCCGATTTCAAGGTGAGGAAACCAAGTGGGATAAGCCTAAATaGACAGAAGCGGTCTCGGAT +
Preference number: 4 (lower is better)
Translates to: RWGQGKTREARFQGEETKWDKPK*TEAVSD
Trigger: ATCCGAGACCGCTTCTGTCCATTTAGGCTTATCCCA...CTTGGTTTCCTCACCTTGAAATCGGGCTTCACGCGTCTTGCCTTGTCCCCAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp GAATTGCATGGTCACCCCCTTAGTCTTGGTTTGTTGGCTTTTTGTATTGAAGAATGGTGGTGCAGCGGCTaGTGGGCCGTGAGGACAGCG +
Preference number: 4 (lower is better)
Translates to: ELHGHPLSLGLLAFCIEEWWCSG*WAVRTA
Trigger: CGCTGTCCTCACGGCCCACCAGCCGCTGCACCACCA...TTCTTCAATACAAAAAGCCAACAAACCAAGACTAAGGGGGTGACCATGCAATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp CGGACTGTGGTAGGGTGGGTTTTCCCTCCTGAAAGTGGAGGATATTTGCGGAGTGCGGTCATCTCATCGTaGTCAGAAGGATGGATGTAT +
Preference number: 4 (lower is better)
Translates to: RTVVGWVFPPESGGYLRSAVISS*SEGWMY
Trigger: ATACATCCATCCTTCTGACCACGATGAGATGACCGC...ACTCCGCAAATATCCTCCACTTTCAGGAGGGAAAACCCACCCTACCACAGTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp ATGCCTATTCAATATATTCTGAAGGTGCTACTCTTGGTGTTATCAAGAGTTCATATTTGCCGGGCTCGGTaGCGCCGCAGCCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: MPIQYILKVLLLVLSRVHICRAR*RRSPGR
Trigger: CCTCCCGGGGCTGCGGCGCCACCGAGCCCGGCAAAT...ATGAACTCTTGATAACACCAAGAGTAGCACCTTCAGAATATATTGAATAGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR GCA 90 bp ACAGTGGAGTTGTGTATTCATGGGACTTACAATCATCACTTCTGCCTTCACCTACTGTTTCCTCCCTCCTaGCTCTCCTGCCTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: TVELCIHGTYNHHFCLHLLFPPS*LSCLGL
Trigger: AAGGCCGAGGCAGGAGAGGCAGGAGGGAGGAAACAG...TAGGTGAAGGCAGAAGTGATGATTGTAAGTCCCATGAATACACAACTCCACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR GCA 90 bp CGGACTGTGGTAGGGTGGGTTTTCCCTCCTGAAAGTGGAGGATATTTGCGGAGTGACACAAAATGGAATTaGATGGTCACCCCCTTAGTC +
Preference number: 4 (lower is better)
Translates to: RTVVGWVFPPESGGYLRSDTKWN*MVTPLV
Trigger: GACTAAGGGGGTGACCATGCAATTCCATTTTGTGTC...ACTCCGCAAATATCCTCCACTTTCAGGAGGGAAAACCCACCCTACCACAGTCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR GCA 90 bp CCTGGAATTCTGACCCAAGAGCACGAGGGGAGCAGGCTTGCACCACTTTTGTCCCAGAAGCAAAGGAAATaGCAAATTTCAACTGGAGGA +
Preference number: 4 (lower is better)
Translates to: PGILTQEHEGSRLAPLLSQKQRK*QISTGG
Trigger: TCCTCCAGTTGAAATTTGGCATTTCCTTTGCTTCTG...GGACAAAAGTGGTGCAAGCCTGCTCCCCTCGTGCTCTTGGGTCAGAATTCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483178.2
CDS-3UTR CCA 90 bp GGTGGGTTTTCCCTCCTGAAAGTGGAGGATATTTGCGGAGTGAAACCGCTTCAACGAGCTGTATTGCTGTaGGGGGTAAGGGTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: GGFSLLKVEDICGVKPLQRAVLL*GVRVCS
Trigger: AGAACAAACCCTTACCCCCCACAGCAATACAGCTCG...TTGAAGCGGTTTCACTCCGCAAATATCCTCCACTTTCAGGAGGGAAAACCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR TCA 90 bp GCGGTTCAATGCATTGTGCAGTTCAGAGCCATGACAGGATTTTTCCATGTTGAGTTGCTGCTGAAGACGTaGGAGTCCAGAGGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: AVQCIVQFRAMTGFFHVELLLKT*ESRGKC
Trigger: ACACTTCCCTCTGGACTCTCACGTCTTCAGCAGCAA...CTCAACATGGAAAAATCCTGTCATGGCTCTGAACTGCACAATGCATTGAACCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR TCA 90 bp AATTTGCAAATTGTGACTCTTACCATGAGGCCCACTGACAGACACCCTGTAGGGACAAGGAGCTGTGAATaGGGTATAGCTGAGTGCGTG +
Preference number: 4 (lower is better)
Translates to: NLQIVTLTMRPTDRHPVGTRSCE*GIAECV
Trigger: CACGCACTCAGCTATACCTCATTCACAGCTCCTTGT...CCCTACAGGGTGTCTGTCAGTGGGCCTCATGGTAAGAGTCACAATTTGCAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp AATTTGCAAATTGTGACTCTTACCATGAGGCCCACTGACAGACACCCTGTAGGGTCTATCTCATACTCTTaGAGCAGGTGGTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: NLQIVTLTMRPTDRHPVGSISYS*SRWWCS
Trigger: GCTGCACCACCACCTGCTCCAAGAGTATGAGATAGA...CCCTACAGGGTGTCTGTCAGTGGGCCTCATGGTAAGAGTCACAATTTGCAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp GCGGTTCAATGCATTGTGCAGTTCAGAGCCATGACAGGATTTTTCCATGTTGAGGTTCGCCGGTGGCTCTaGAGGATTTTTAGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: AVQCIVQFRAMTGFFHVEVRRWL*RIFSWR
Trigger: TCTCCAGCTAAAAATCCTCCAGAGCCACCGGCGAAC...CTCAACATGGAAAAATCCTGTCATGGCTCTGAACTGCACAATGCATTGAACCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp AATATTGGCTTAAAAGACACAGGTATCAATGCAAATCCCCACGTGGTGGGTGCTGTGCTGTGTGTGTATTaGAGAGACCTGGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: NIGLKDTGINANPHVVGAVLCVY*RDLGWA
Trigger: TGCCCAGCCCAGGTCTCTCCAATACACACACAGCAC...AGCACCCACCACGTGGGGATTTGCATTGATACCTGTGTCTTTTAAGCCAATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483178.2
CDS-3UTR CCA 90 bp ACACAGGTATCAATGCAAATCCCCACGTGGTGGGTGCTGTGTGTGTATTGGAGATTAGGCACGGCATCTTaGTTAAGGAGAAGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: TQVSMQIPTWWVLCVYWRLGTAS*LRRSLV
Trigger: GACCAAGCTTCTCCTTAACCAAGATGCCGTGCCTAA...TCTCCAATACACACACAGCACCCACCACGTGGGGATTTGCATTGATACCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483178.2
CDS-3UTR TCA 90 bp GCACACGTAACATGTTCTTACGAAGTTTTCTCGCTGTGTAGAAAATGCTTAAAAGCACGCGGTGGTAGTTaGGCAGCACGAAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: AHVTCSYEVFSLCRKCLKARGGS*AARRAA
Trigger: AGCTGCCCTTCGTGCTGCTCAACTACCACCGCGTGC...TTTTAAGCATTTTCTACACAGCGAGAAAACTTCGTAAGAACATGTTACGTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR TCA 90 bp CGTTGGGGACAAGGCAAGACGCGTGAAGCCCGATTTCAAGGTGAGGAAACCAAGCGTAATAATGAAGCTTaGCAGGGTCATTCTCATAAA +
Preference number: 4 (lower is better)
Translates to: RWGQGKTREARFQGEETKRNNEA*QGHSHK
Trigger: TTTATGAGAATGACCCTGTCAAGCTTCATTATTACG...CTTGGTTTCCTCACCTTGAAATCGGGCTTCACGCGTCTTGCCTTGTCCCCAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR GCA 90 bp ATGGAATTGCATGGTCACCCCCTTAGTCTTGGTTTGTTGGCTTTTTGTATTGAATACTCCTTCGTCGAGTaGTCGAACCGGCTGCGGCAA +
Preference number: 4 (lower is better)
Translates to: MELHGHPLSLGLLAFCIEYSFVE*SNRLRQ
Trigger: TTGCCGCAGCCGGTTCGAGCACTCGACGAAGGAGTA...TTCAATACAAAAAGCCAACAAACCAAGACTAAGGGGGTGACCATGCAATTCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp GGTGGGTTTTCCCTCCTGAAAGTGGAGGATATTTGCGGAGTGAAACCGCTTCAAAATTACAGATCTGTGTaGGCCAGAGGGATTTTGCCA +
Preference number: 4 (lower is better)
Translates to: GGFSLLKVEDICGVKPLQNYRSV*ARGILP
Trigger: TGGCAAAATCCCTCTGGCCCACACAGATCTGTAATT...TTGAAGCGGTTTCACTCCGCAAATATCCTCCACTTTCAGGAGGGAAAACCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR TCA 90 bp TGGAATTGCATGGTCACCCCCTTAGTCTTGGTTTGTTGGCTTTTTGTATTGAAGAAATACTGTTGCCCGTaGGCTCCACCTGGGATAAGC +
Preference number: 4 (lower is better)
Translates to: WNCMVTPLVLVCWLFVLKKYCCP*APPGIS
Trigger: GCTTATCCCAGGTGGAGCTCACGGGCAACAGTATTT...CTTCAATACAAAAAGCCAACAAACCAAGACTAAGGGGGTGACCATGCAATTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR TCA 90 bp AGGACGGCGGTTCAATGCATTGTGCAGTTCAGAGCCATGACAGGATTTTTCCATGCAGTGTTGATAGTGTaGAGAAAATTGAAGGACGGC +
Preference number: 4 (lower is better)
Translates to: RTAVQCIVQFRAMTGFFHAVLIV*RKLKDG
Trigger: GCCGTCCTTCAATTTTCTTCACACTATCAACACTGC...ATGGAAAAATCCTGTCATGGCTCTGAACTGCACAATGCATTGAACCGCCGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR TCA 90 bp GAATTGCATGGTCACCCCCTTAGTCTTGGTTTGTTGGCTTTTTGTATTGAAGAAAGCCCCTTCGCTGCATaGCCCACGGTCCTAAATTTG +
Preference number: 4 (lower is better)
Translates to: ELHGHPLSLGLLAFCIEESPFAA*PTVLNL
Trigger: CAAATTTAGGACCGTGGGTCATGCAGCGAAGGGGCT...TTCTTCAATACAAAAAGCCAACAAACCAAGACTAAGGGGGTGACCATGCAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR GCA 90 bp GAATTGCATGGTCACCCCCTTAGTCTTGGTTTGTTGGCTTTTTGTATTGAAGAAGCTCAGGAAAAAGCGTaGCACCTCACAAGGGGATCC +
Preference number: 4 (lower is better)
Translates to: ELHGHPLSLGLLAFCIEEAQEKA*HLTRGS
Trigger: GGATCCCCTTGTGAGGTGGCACGCTTTTTCCTGAGC...TTCTTCAATACAAAAAGCCAACAAACCAAGACTAAGGGGGTGACCATGCAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR GCA 90 bp ATGGAATTGCATGGTCACCCCCTTAGTCTTGGTTTGTTGGCTTTTTGTATTGAAATCCAGCCCCTTCGCTaGATGACCCACGGTCCTAAA +
Preference number: 4 (lower is better)
Translates to: MELHGHPLSLGLLAFCIEIQPLR*MTHGPK
Trigger: TTTAGGACCGTGGGTCATGCAGCGAAGGGGCTGGAT...TTCAATACAAAAAGCCAACAAACCAAGACTAAGGGGGTGACCATGCAATTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR GCA 90 bp AATATTGGCTTAAAAGACACAGGTATCAATGCAAATCCCCACGTGGTGGGTGCTAGACACAGGTATCAATaGAAATCCCCACGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: NIGLKDTGINANPHVVGARHRYQ*KSPRGG
Trigger: CCCACCACGTGGGGATTTGCATTGATACCTGTGTCT...AGCACCCACCACGTGGGGATTTGCATTGATACCTGTGTCTTTTAAGCCAATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483178.2
CDS-3UTR CCA 90 bp ACAGTGGAGTTGTGTATTCATGGGACTTACAATCATCACTTCTGCCTTCACCTACCCGTGAGCTCCACCTaGGATAAGCCTAAATGGACA +
Preference number: 4 (lower is better)
Translates to: TVELCIHGTYNHHFCLHLPVSST*DKPKWT
Trigger: TGTCCATTTAGGCTTATCCCAGGTGGAGCTCACGGG...TAGGTGAAGGCAGAAGTGATGATTGTAAGTCCCATGAATACACAACTCCACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp ACAGTGGAGTTGTGTATTCATGGGACTTACAATCATCACTTCTGCCTTCACCTAAGCAGTGTTCGCCGGTaGCTCTGGAGGATTTTTAGC +
Preference number: 4 (lower is better)
Translates to: TVELCIHGTYNHHFCLHLSSVRR*LWRIFS
Trigger: GCTAAAAATCCTCCAGAGCCACCGGCGAACACTGCT...TAGGTGAAGGCAGAAGTGATGATTGTAAGTCCCATGAATACACAACTCCACTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR TCA 90 bp TTCAACTGGAGGAAACACATATGTAATTTTCCCCATGAAATGTCATGGACCACCAAATACTGTTGCCCGTaGGCTCCACCTGGGATAAGC +
Preference number: 4 (lower is better)
Translates to: FNWRKHICNFPHEMSWTTKYCCP*APPGIS
Trigger: GCTTATCCCAGGTGGAGCTCACGGGCAACAGTATTT...GGTGGTCCATGACATTTCATGGGGAAAATTACATATGTGTTTCCTCCAGTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483178.2
CDS-3UTR GCA 90 bp ACAGTGGAGTTGTGTATTCATGGGACTTACAATCATCACTTCTGCCTTCACCTAAATCCATCCAAAGTCTaGAGCAAGTGCGATCCCAGC +
Preference number: 4 (lower is better)
Translates to: TVELCIHGTYNHHFCLHLNPSKV*SKCDPS
Trigger: GCTGGGATCGCACTTGCTGCAGACTTTGGATGGATT...TAGGTGAAGGCAGAAGTGATGATTGTAAGTCCCATGAATACACAACTCCACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR GCA 90 bp AATTTGCAAATTGTGACTCTTACCATGAGGCCCACTGACAGACACCCTGTAGGGTTTTCCTTCACAAGGTaGAGTCCATTGACAGTGTTC +
Preference number: 4 (lower is better)
Translates to: NLQIVTLTMRPTDRHPVGFSFTR*SPLTVF
Trigger: GAACACTGTCAATGGACTGCACCTTGTGAAGGAAAA...CCCTACAGGGTGTCTGTCAGTGGGCCTCATGGTAAGAGTCACAATTTGCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp ATGCCTATTCAATATATTCTGAAGGTGCTACTCTTGGTGTTATCAAGAGTTCATCCTGGGACTTGGCAGTaGACACCTGCTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: MPIQYILKVLLLVLSRVHPGTWQ*TPAPGT
Trigger: TGTCCCTGGAGCAGGTGTCCACTGCCAAGTCCCAGG...ATGAACTCTTGATAACACCAAGAGTAGCACCTTCAGAATATATTGAATAGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp ACAGTGGAGTTGTGTATTCATGGGACTTACAATCATCACTTCTGCCTTCACCTATGGAGGATTTTTAGCTaGAGACGAGCTGCTAGGCAC +
Preference number: 4 (lower is better)
Translates to: TVELCIHGTYNHHFCLHLWRIFS*RRAARH
Trigger: GTGCCTAGCAGCTCGTCTCCAGCTAAAAATCCTCCA...TAGGTGAAGGCAGAAGTGATGATTGTAAGTCCCATGAATACACAACTCCACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR TCA 90 bp GAATTGCATGGTCACCCCCTTAGTCTTGGTTTGTTGGCTTTTTGTATTGAAGAACCAGCATATACTGCCTaGTCTTCAAGTAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: ELHGHPLSLGLLAFCIEEPAYTA*SSSSHC
Trigger: GCAGTGGCTACTTGAAGATCAGGCAGTATATGCTGG...TTCTTCAATACAAAAAGCCAACAAACCAAGACTAAGGGGGTGACCATGCAATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR TCA 90 bp GGTGGGTTTTCCCTCCTGAAAGTGGAGGATATTTGCGGAGTGAAACCGCTTCAAAATGAGACTCTTGAATaGCTTTTAAAGACAGTGGAG +
Preference number: 4 (lower is better)
Translates to: GGFSLLKVEDICGVKPLQNETLE*LLKTVE
Trigger: CTCCACTGTCTTTAAAAGTCATTCAAGAGTCTCATT...TTGAAGCGGTTTCACTCCGCAAATATCCTCCACTTTCAGGAGGGAAAACCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp ACAGGTACTAGGGACCCCAAGATGGTTTATCATCTATCATCAGAAGCAAAGGAAGCGGTCATCTCATCGTaGTCAGAAGGATGGATGTAT +
Preference number: 4 (lower is better)
Translates to: TGTRDPKMVYHLSSEAKEAVISS*SEGWMY
Trigger: ATACATCCATCCTTCTGACCACGATGAGATGACCGC...TTCCTTTGCTTCTGATGATAGATGATAAACCATCTTGGGGTCCCTAGTACCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483178.2
CDS-3UTR TCA 90 bp ACAGGTACTAGGGACCCCAAGATGGTTTATCATCTATCATCAGAAGCAAAGGAATGGGAAGCAAAGCCCTaGGTTCCATTTAAGAATGTC +
Preference number: 4 (lower is better)
Translates to: TGTRDPKMVYHLSSEAKEWEAKP*VPFKNV
Trigger: GACATTCTTAAATGGAACTCAGGGCTTTGCTTCCCA...TTCCTTTGCTTCTGATGATAGATGATAAACCATCTTGGGGTCCCTAGTACCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483178.2
CDS-3UTR GCA 90 bp GAATTGCATGGTCACCCCCTTAGTCTTGGTTTGTTGGCTTTTTGTATTGAAGAATCGGCTTATTTCCTGTaGACACACTCACAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: ELHGHPLSLGLLAFCIEESAYFL*THSQGA
Trigger: AGCTCCTTGTGAGTGTGTGCACAGGAAATAAGCCGA...TTCTTCAATACAAAAAGCCAACAAACCAAGACTAAGGGGGTGACCATGCAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR GCA 90 bp AAGGAAATGCCAAATTTCAACTGGAGGAAACACATATGTAATTTTCCCCATGAACGAGGGGAGCAGGCTTaGACCACTTTTGTCCTCTAC +
Preference number: 4 (lower is better)
Translates to: KEMPNFNWRKHICNFPHERGEQA*TTFVLY
Trigger: GTAGAGGACAAAAGTGGTGCAAGCCTGCTCCCCTCG...TTCATGGGGAAAATTACATATGTGTTTCCTCCAGTTGAAATTTGGCATTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000483178.2
CDS-3UTR GCA 90 bp GCGGTTCAATGCATTGTGCAGTTCAGAGCCATGACAGGATTTTTCCATGTTGAGGACAGTGTTCCGTATTaGACGTGCAATTTAACTTTA +
Preference number: 4 (lower is better)
Translates to: AVQCIVQFRAMTGFFHVEDSVPY*TCNLTL
Trigger: TAAAGTTAAATTGCACGTGCAATACGGAACACTGTC...CTCAACATGGAAAAATCCTGTCATGGCTCTGAACTGCACAATGCATTGAACCGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR GCA 90 bp ATGCCTATTCAATATATTCTGAAGGTGCTACTCTTGGTGTTATCAAGAGTTCATAGGACGGCGGTTCAATaGATTGTGCAGTTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: MPIQYILKVLLLVLSRVHRTAVQ*IVQFRA
Trigger: GGCTCTGAACTGCACAATGCATTGAACCGCCGTCCT...ATGAACTCTTGATAACACCAAGAGTAGCACCTTCAGAATATATTGAATAGGCAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp GCGGTTCAATGCATTGTGCAGTTCAGAGCCATGACAGGATTTTTCCATGTTGAGGGAGTTGTGTATTCATaGGACTTACAATCATCACTT +
Preference number: 4 (lower is better)
Translates to: AVQCIVQFRAMTGFFHVEGVVYS*DLQSSL
Trigger: AAGTGATGATTGTAAGTCCCATGAATACACAACTCC...CTCAACATGGAAAAATCCTGTCATGGCTCTGAACTGCACAATGCATTGAACCGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CCA 90 bp AAGGAAATGCCAAATTTCAACTGGAGGAAACACATATGTAATTTTCCCCATGAATCATGCCCAGCCACTTaGCAGATGTGGGAAGCAAAG +
Preference number: 4 (lower is better)
Translates to: KEMPNFNWRKHICNFPHESCPAT*QMWEAK
Trigger: CTTTGCTTCCCACATCTGCCAAGTGGCTGGGCATGA...TTCATGGGGAAAATTACATATGTGTTTCCTCCAGTTGAAATTTGGCATTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483178.2
CDS-3UTR CCA 90 bp AAGGAAATGCCAAATTTCAACTGGAGGAAACACATATGTAATTTTCCCCATGAACAAATCCCCACGTGGTaGGTGCTGTGTGTGTATTGG +
Preference number: 4 (lower is better)
Translates to: KEMPNFNWRKHICNFPHEQIPTW*VLCVYW
Trigger: CCAATACACACACAGCACCCACCACGTGGGGATTTG...TTCATGGGGAAAATTACATATGTGTTTCCTCCAGTTGAAATTTGGCATTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483178.2
CDS-3UTR TCA 90 bp TGGAATTGCATGGTCACCCCCTTAGTCTTGGTTTGTTGGCTTTTTGTATTGAAGACTGCTGGTGCTTTATaGAAGGATTTCTGTTTACCT +
Preference number: 4 (lower is better)
Translates to: WNCMVTPLVLVCWLFVLKTAGAL*KDFCLP
Trigger: AGGTAAACAGAAATCCTTTCATAAAGCACCAGCAGT...CTTCAATACAAAAAGCCAACAAACCAAGACTAAGGGGGTGACCATGCAATTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR TCA 90 bp AAGGAAATGCCAAATTTCAACTGGAGGAAACACATATGTAATTTTCCCCATGAACTTGGTCTAGACCCGTaGTGCTGTAATCCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: KEMPNFNWRKHICNFPHELGLDP*CCNPWN
Trigger: ATTCCAGGGATTACAGCATCACGGGTCTAGACCAAG...TTCATGGGGAAAATTACATATGTGTTTCCTCCAGTTGAAATTTGGCATTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483178.2
CDS-3UTR TCA 90 bp AGGCATGTGGGCATAAGCGATATGTTTAAACCTGCAAAACTTTCCTATGATATGGAACTCCTGAAATTTTaGAGTAGGCATGTGGGCATA +
Preference number: 4 (lower is better)
Translates to: RHVGISDMFKPAKLSYDMELLKF*SRHVGI
Trigger: TATGCCCACATGCCTACTTCAAAATTTCAGGAGTTC...CATATCATAGGAAAGTTTTGCAGGTTTAAACATATCGCTTATGCCCACATGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483178.2
CDS-3UTR CCA 90 bp AGGCATGTGGGCATAAGCGATATGTTTAAACCTGCAAAACTTTCCTATGATATGCTAGGGACCCCAAGATaGTTTATCATCTATCATCAG +
Preference number: 4 (lower is better)
Translates to: RHVGISDMFKPAKLSYDMLGTPR*FIIYHQ
Trigger: CTGATGATAGATGATAAACCATCTTGGGGTCCCTAG...CATATCATAGGAAAGTTTTGCAGGTTTAAACATATCGCTTATGCCCACATGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483178.2
CDS-3UTR TCA 90 bp ATGCCTATTCAATATATTCTGAAGGTGCTACTCTTGGTGTTATCAAGAGTTCATTGCAGTTCAGAGCCATaGCAGGATTTTTCCATGTTG +
Preference number: 4 (lower is better)
Translates to: MPIQYILKVLLLVLSRVHCSSEP*QDFSML
Trigger: CAACATGGAAAAATCCTGTCATGGCTCTGAACTGCA...ATGAACTCTTGATAACACCAAGAGTAGCACCTTCAGAATATATTGAATAGGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR GCA 90 bp GAATTGCATGGTCACCCCCTTAGTCTTGGTTTGTTGGCTTTTTGTATTGAAGAACCTTTGTTATTGAACTaGTCCGATAGCCTTGATTTA +
Preference number: 4 (lower is better)
Translates to: ELHGHPLSLGLLAFCIEEPLLLN*SDSLDL
Trigger: TAAATCAAGGCTATCGGAGCAGTTCAATAACAAAGG...TTCTTCAATACAAAAAGCCAACAAACCAAGACTAAGGGGGTGACCATGCAATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS GCA 90 bp CCGCCGGGCCTGAGCTCCGAGCAACCCGGCGGCGCCGCCCGCCGCTaGCCGGAGCGCAGCCTCCTCCGGGCTGGACCGTCCTGCAGCAAC +
Preference number: 5 (lower is better)
Translates to: PPGLSSEQPGGAARR*PERSLLRAGPSCSN
Trigger: GTTGCTGCAGGACGGTCCAGCCCGGAGGAGGCTGCGCTCCGGGCAGCGGCGGGCGGCGCCGCCGGGTTGCTCGGAGCTCAGGCCCGGCGG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290399.11
ENST00000460783.1
ENST00000481185.1
CDS-3UTR CAA 90 bp GGACAGAGGCGGGCGGTCACCTGCCCGGACCCGGGCGCTCCTCGGCCCTCGGCAGTAGGTCGTGCGCATTaGCCGGGCTCGGTGGCGCCG +
Preference number: 5 (lower is better)
Translates to: GQRRAVTCPDPGAPRPSAVGRAH*PGSVAP
Trigger: CGGCGCCACCGAGCCCGGCAAATGCGCACGACCTAC...TGCCGAGGGCCGAGGAGCGCCCGGGTCCGGGCAGGTGACCGCCCGCCTCTGTCC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS GCA 90 bp GGCGGCCGGCGCGGAGGCGGAGGCGCTGCTTACTCCTTCGTCGAGTaGTCGAACCGGCTGCGGCAAGGCCCCTCCGGACCGGAGGGCGAC +
Preference number: 5 (lower is better)
Translates to: GGRRGGGGAAYSFVE*SNRLRQGPSGPEGD
Trigger: GTCGCCCTCCGGTCCGGAGGGGCCTTGCCGCAGCCGGTTCGAGCACTCGACGAAGGAGTAAGCAGCGCCTCCGCCTCCGCGCCGGCCGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290399.11
ENST00000460783.1
ENST00000481185.1
CDS CCA 90 bp CCCGGCGAGGCCGCTCTACCTGCAGCAAGTGCGATCCCAGCTCCTTaGCGACGCCGTCCAGGGGCCCGGCGCGGCTCGGCTGTCCCCACG +
Preference number: 5 (lower is better)
Translates to: PGEAALPAASAIPAP*RRRPGARRGSAVPT
Trigger: CGTGGGGACAGCCGAGCCGCGCCGGGCCCCTGGACGGCGTCGCCAAGGAGCTGGGATCGCACTTGCTGCAGGTAGAGCGGCCTCGCCGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460783.1
CDS GCA 90 bp GAGGCGGAGGCGCTGCTTACTCCTTCGTCGAGTGCTCGAACCGGCTaGGGCAAGGCCCCTCCGGACCGGAGGGCGACAGGGGCGGCGGTG +
Preference number: 5 (lower is better)
Translates to: EAEALLTPSSSARTG*GKAPPDRRATGAAV
Trigger: CACCGCCGCCCCTGTCGCCCTCCGGTCCGGAGGGGCCTTGCCGCAGCCGGTTCGAGCACTCGACGAAGGAGTAAGCAGCGCCTCCGCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290399.11
ENST00000460783.1
ENST00000481185.1
CDS GCA 90 bp GCCCGCCGCTGCCCGGAGCGCAGCCTCCTCCGGGCTGGACCGTCCTaGAGCAACCGGAGCCCCGTTCCTGCTCGCTCCTGTTTCCTCCCT +
Preference number: 5 (lower is better)
Translates to: ARRCPERSLLRAGPS*SNRSPVPARSCFLP
Trigger: AGGGAGGAAACAGGAGCGAGCAGGAACGGGGCTCCGGTTGCTGCAGGACGGTCCAGCCCGGAGGAGGCTGCGCTCCGGGCAGCGGCGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290399.11
ENST00000460783.1
ENST00000481185.1
CDS-3UTR CAA 90 bp GGACAGAGGCGGGCGGTCACCTGCCCGGACCCGGGCGCTCCTCGGCCCTCGGCACCCCCAGCGGGACTGTaGTGGAACGTTGGGGACAAG +
Preference number: 5 (lower is better)
Translates to: GQRRAVTCPDPGAPRPSAPPAGL*WNVGDK
Trigger: CTTGTCCCCAACGTTCCACAACAGTCCCGCTGGGGG...TGCCGAGGGCCGAGGAGCGCCCGGGTCCGGGCAGGTGACCGCCCGCCTCTGTCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CAA 90 bp GCTCCTCGGCCCTCGGCACCGGCGCGCGGGGCCTCCGCGGTGGAAATCCGCAAGCTCACAAGGGGATCCTaGGGGCTGCCCGAACTTGGC +
Preference number: 5 (lower is better)
Translates to: APRPSAPARGASAVEIRKLTRGS*GLPELG
Trigger: GCCAAGTTCGGGCAGCCCCAAGGATCCCCTTGTGAG...CTTGCGGATTTCCACCGCGGAGGCCCCGCGCGCCGGTGCCGAGGGCCGAGGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS GCA 90 bp GTGTCCCCAGCCAGCGCCAACAGCCCACCTGGAAGTGGCGAGCTGTaGTCAGGGCTACCCGGCCGACCCGCAAAGCCCCTCTGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: VSPASANSPPGSGEL*SGLPGRPAKPLCCQ
Trigger: CTGGCAGCAGAGGGGCTTTGCGGGTCGGCCGGGTAGCCCTGAGCACAGCTCGCCACTTCCAGGTGGGCTGTTGGCGCTGGCTGGGGACAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460783.1
CDS-3UTR CAA 90 bp AACCAAGCCCCCAGCAACTGGGTCGCACCGGCCCTCGCAGGACAGAGGCGGGCGGCGGGTCACCTCCCGTaGGTGATGATGACCGAGGCG +
Preference number: 5 (lower is better)
Translates to: NQAPSNWVAPALAGQRRAAGHLP*VMMTEA
Trigger: CGCCTCGGTCATCATCACCAACGGGAGGTGACCCGC...CGCCCGCCTCTGTCCTGCGAGGGCCGGTGCGACCCAGTTGCTGGGGGCTTGGTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS GCA 90 bp TCTCCATCTGCCACCCACCGCCATGGCTGCTTCGGCTCCCGGCCGTaGGCAGTCCTCCCACCTTCCCCACGAGCAGACCTGACCCACCTT +
Preference number: 5 (lower is better)
Translates to: SPSATHRHGCFGSRP*AVLPPSPRADLTHL
Trigger: AAGGTGGGTCAGGTCTGCTCGTGGGGAAGGTGGGAGGACTGCGCACGGCCGGGAGCCGAAGCAGCCATGGCGGTGGGTGGCAGATGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481185.1
CDS CCA 90 bp AGATCGGGATGTGTCCCCAGCCAGCGCCAACAGCCCACCTGGAAGTaGCGAGCTGTGCTCAGGGCTACCCGGCCGACCCGCAAAGCCCCT +
Preference number: 5 (lower is better)
Translates to: RSGCVPSQRQQPTWK*RAVLRATRPTRKAP
Trigger: AGGGGCTTTGCGGGTCGGCCGGGTAGCCCTGAGCACAGCTCGCCACTTCCAGGTGGGCTGTTGGCGCTGGCTGGGGACACATCCCGATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460783.1
CDS CCA 90 bp TGCCCAAAGCGTGAGGGTTCTGTCTCCATCTGCCACCCACCGCCATaGCTGCTTCGGCTCCCGGCCGTGCGCAGTCCTCCCACCTTCCCC +
Preference number: 5 (lower is better)
Translates to: CPKREGSVSICHPPP*LLRLPAVRSPPTFP
Trigger: GGGGAAGGTGGGAGGACTGCGCACGGCCGGGAGCCGAAGCAGCCATGGCGGTGGGTGGCAGATGGAGACAGAACCCTCACGCTTTGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481185.1
CDS-3UTR CAA 90 bp AACCAAGCCCCCAGCAACTGGGTCGCACCGGCCCTCGCAGGACAGAGGCGGGCGTGGGGCTGCCCGAACTaGGCCGGCAACATTGGCTTT +
Preference number: 5 (lower is better)
Translates to: NQAPSNWVAPALAGQRRAWGCPN*AGNIGF
Trigger: AAAGCCAATGTTGCCGGCCAAGTTCGGGCAGCCCCA...CGCCCGCCTCTGTCCTGCGAGGGCCGGTGCGACCCAGTTGCTGGGGGCTTGGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS GCA 90 bp CAAAGCGTGAGGGTTCTGTCTCCATCTGCCACCCACCGCCATGGCTaGTTCGGCTCCCGGCCGTGCGCAGTCCTCCCACCTTCCCCACGA +
Preference number: 5 (lower is better)
Translates to: QSVRVLSPSATHRHG*FGSRPCAVLPPSPR
Trigger: TCGTGGGGAAGGTGGGAGGACTGCGCACGGCCGGGAGCCGAAGCAGCCATGGCGGTGGGTGGCAGATGGAGACAGAACCCTCACGCTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481185.1
CDS TCA 90 bp GCTCCCGGCCGTGCGCAGTCCTCCCACCTTCCCCACGAGCAGACCTaGCCCACCTTCGTAGCTTGGCACCAGGCTGTGCCTAGCAGTGTT +
Preference number: 5 (lower is better)
Translates to: APGRAQSSHLPHEQT*PTFVAWHQAVPSSV
Trigger: AACACTGCTAGGCACAGCCTGGTGCCAAGCTACGAAGGTGGGTCAGGTCTGCTCGTGGGGAAGGTGGGAGGACTGCGCACGGCCGGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481185.1
CDS CCA 90 bp AAACAAATCCATCCAAAGTCTGCAGCAAGTGCGATCCCAGCTCCTTaGCGACGCCGTCCAGGGGCCCGGCGCGGCTCGGCTGTCCCCACG +
Preference number: 5 (lower is better)
Translates to: KQIHPKSAASAIPAP*RRRPGARRGSAVPT
Trigger: CGTGGGGACAGCCGAGCCGCGCCGGGCCCCTGGACGGCGTCGCCAAGGAGCTGGGATCGCACTTGCTGCAGACTTTGGATGGATTTGTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290399.11
ENST00000481185.1
CDS CCA 90 bp AGCTCCTGCAGGGTGAATGGCCCCGGGCTCGGGGCGCTAAGCACCTaGCTCCAAACCAAGCAAGAGCCCGGAGGCCTCACCAAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: SSCRVNGPGLGALST*LQTKQEPGGLTKFW
Trigger: CCAGAACTTGGTGAGGCCTCCGGGCTCTTGCTTGGTTTGGAGCCAGGTGCTTAGCGCCCCGAGCCCGGGGCCATTCACCCTGCAGGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460783.1
CDS-3UTR CAA 90 bp AACCAAGCCCCCAGCAACTGGGTCGCACCGGCCCTCGCAGGACAGAGGCGGGCGGTCTTGGCCGCATTCTaGGACTTCTCCTTCATCGCG +
Preference number: 5 (lower is better)
Translates to: NQAPSNWVAPALAGQRRAVLAAF*DFSFIA
Trigger: CGCGATGAAGGAGAAGTCCAAGAATGCGGCCAAGAC...CGCCCGCCTCTGTCCTGCGAGGGCCGGTGCGACCCAGTTGCTGGGGGCTTGGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CAA 90 bp GCTCCTCGGCCCTCGGCACCGGCGCGCGGGGCCTCCGCGGTGGAAATCCGCAAGACAAGGTGCAGTCCATaGACAGTGTTCCGTATTGCA +
Preference number: 5 (lower is better)
Translates to: APRPSAPARGASAVEIRKTRCSP*TVFRIA
Trigger: TGCAATACGGAACACTGTCAATGGACTGCACCTTGT...CTTGCGGATTTCCACCGCGGAGGCCCCGCGCGCCGGTGCCGAGGGCCGAGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CAA 90 bp GCTCCTCGGCCCTCGGCACCGGCGCGCGGGGCCTCCGCGGTGGAAATCCGCAAGAGACACAAAATGGAATaGCATGGTCACCCCCTTAGT +
Preference number: 5 (lower is better)
Translates to: APRPSAPARGASAVEIRKRHKME*HGHPLS
Trigger: ACTAAGGGGGTGACCATGCAATTCCATTTTGTGTCT...CTTGCGGATTTCCACCGCGGAGGCCCCGCGCGCCGGTGCCGAGGGCCGAGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS TCA 90 bp AGCGCTGGGTGGAACCTGCTGAGGGAAGTGAGATTGGAAAGCACTTaGCCACGCTCGGGAGGCGCCCCTGGCGTAGGTCTCAGGTGGCCT +
Preference number: 5 (lower is better)
Translates to: SAGWNLLREVRLEST*PRSGGAPGVGLRWP
Trigger: AGGCCACCTGAGACCTACGCCAGGGGCGCCTCCCGAGCGTGGTCAAGTGCTTTCCAATCTCACTTCCCTCAGCAGGTTCCACCCAGCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460783.1
CDS GCA 90 bp GAAAGAGGGCAAGTTTGCCCAAAGCGTGAGGGTTCTGTCTCCATCTaGCACCCACCGCCATGGCTGCTTCGGCTCCCGGCCGTGCGCAGT +
Preference number: 5 (lower is better)
Translates to: ERGQVCPKREGSVSI*HPPPWLLRLPAVRS
Trigger: ACTGCGCACGGCCGGGAGCCGAAGCAGCCATGGCGGTGGGTGGCAGATGGAGACAGAACCCTCACGCTTTGGGCAAACTTGCCCTCTTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481185.1
CDS CCA 90 bp TTTGAAAGATCGGGATGTGTCCCCAGCCAGCGCCAACAGCCCACCTaGAAGTGGCGAGCTGTGCTCAGGGCTACCCGGCCGACCCGCAAA +
Preference number: 5 (lower is better)
Translates to: FERSGCVPSQRQQPT*KWRAVLRATRPTRK
Trigger: TTTGCGGGTCGGCCGGGTAGCCCTGAGCACAGCTCGCCACTTCCAGGTGGGCTGTTGGCGCTGGCTGGGGACACATCCCGATCTTTCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460783.1
CDS CCA 90 bp TGCCTGGGGTTGGTCCAGCGAGCAAACAGGAGTCAGTCTGCGTCCTaGGGAGCTGGCGGTATCTCCGCAGAGGACATCTGCTTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: CLGLVQRANRSQSAS*GAGGISAEDICLPA
Trigger: GGCAGGCAAGCAGATGTCCTCTGCGGAGATACCGCCAGCTCCCCAGGACGCAGACTGACTCCTGTTTGCTCGCTGGACCAACCCCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481185.1
CDS GCA 90 bp AGCGGCCGAATGCTTCAGAGCTCAGAGCAGCCCAATCATTTCTGCTaGTCCAGCCCTGGCGCCTGGCACAGAGCAAGCGCTGGGTGGAAC +
Preference number: 5 (lower is better)
Translates to: SGRMLQSSEQPNHFC*SSPGAWHRASAGWN
Trigger: GTTCCACCCAGCGCTTGCTCTGTGCCAGGCGCCAGGGCTGGAGCAGCAGAAATGATTGGGCTGCTCTGAGCTCTGAAGCATTCGGCCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460783.1
CDS CCA 90 bp GTTGGTCCAGCGAGCAAACAGGAGTCAGTCTGCGTCCTGGGGAGCTaGCGGTATCTCCGCAGAGGACATCTGCTTGCCTGCCACCAGGAG +
Preference number: 5 (lower is better)
Translates to: VGPASKQESVCVLGS*RYLRRGHLLACHQE
Trigger: CTCCTGGTGGCAGGCAAGCAGATGTCCTCTGCGGAGATACCGCCAGCTCCCCAGGACGCAGACTGACTCCTGTTTGCTCGCTGGACCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481185.1
CDS-3UTR CAA 90 bp AAGCCCCCAGCAACTGGGTCGCACCGGCCCTCGCAGGACAGAGGCGGGCGGTCAGAAAGTGGAGGATATTaGCGGAGTGAAACCGCTTCA +
Preference number: 5 (lower is better)
Translates to: KPPATGSHRPSQDRGGRSESGGY*RSETAS
Trigger: TGAAGCGGTTTCACTCCGCAAATATCCTCCACTTTC...TGACCGCCCGCCTCTGTCCTGCGAGGGCCGGTGCGACCCAGTTGCTGGGGGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS GCA 90 bp CACCTTCTGCCTGGGGTTGGTCCAGCGAGCAAACAGGAGTCAGTCTaGGTCCTGGGGAGCTGGCGGTATCTCCGCAGAGGACATCTGCTT +
Preference number: 5 (lower is better)
Translates to: HLLPGVGPASKQESV*VLGSWRYLRRGHLL
Trigger: AAGCAGATGTCCTCTGCGGAGATACCGCCAGCTCCCCAGGACGCAGACTGACTCCTGTTTGCTCGCTGGACCAACCCCAGGCAGAAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481185.1
CDS CCA 90 bp AGCTCAGAGCAGCCCAATCATTTCTGCTGCTCCAGCCCTGGCGCCTaGCACAGAGCAAGCGCTGGGTGGAACCTGCTGAGGGAAGTGAGA +
Preference number: 5 (lower is better)
Translates to: SSEQPNHFCCSSPGA*HRASAGWNLLREVR
Trigger: TCTCACTTCCCTCAGCAGGTTCCACCCAGCGCTTGCTCTGTGCCAGGCGCCAGGGCTGGAGCAGCAGAAATGATTGGGCTGCTCTGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460783.1
CDS CCA 90 bp ACCAAGCAAGAGCCCGGAGGCCTCACCAAGTTCTGGTTATCCGGGTaGGCTCTAGAGCTAGGCCAGTGGGCTAACTCCGCTCCACCCCTT +
Preference number: 5 (lower is better)
Translates to: TKQEPGGLTKFWLSG*ALELGQWANSAPPL
Trigger: AAGGGGTGGAGCGGAGTTAGCCCACTGGCCTAGCTCTAGAGCCCACCCGGATAACCAGAACTTGGTGAGGCCTCCGGGCTCTTGCTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460783.1
CDS-3UTR CAA 90 bp CGTTGGGGACAAGGCAAGACGCGTGAAGCCCGATTTCAAGGTGAGGAAACCAAGGAGGAGCAGCAGCGCTaGCAGGGGGACTGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: RWGQGKTREARFQGEETKEEQQR*QGDWLS
Trigger: GGAGAGCCAGTCCCCCTGCAAGCGCTGCTGCTCCTC...CTTGGTTTCCTCACCTTGAAATCGGGCTTCACGCGTCTTGCCTTGTCCCCAACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS GCA 90 bp CTGTCTCTCCGTCCTTGCGCCCCTTGCACACACACAGCGGCCGAATaGTTCAGAGCTCAGAGCAGCCCAATCATTTCTGCTGCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: LSLRPCAPCTHTAAE*FRAQSSPIISAAPA
Trigger: GGCTGGAGCAGCAGAAATGATTGGGCTGCTCTGAGCTCTGAAGCATTCGGCCGCTGTGTGTGTGCAAGGGGCGCAAGGACGGAGAGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460783.1
CDS CCA 90 bp GTTGGTCCAGCGAGCAAACAGGAGTCAGTCTGCGTCCTGGGGAGCTaGCGGTATCTCCGCAGAGGACATCTGCTTGCCTTCGTAGCTTGG +
Preference number: 5 (lower is better)
Translates to: VGPASKQESVCVLGS*RYLRRGHLLAFVAW
Trigger: CCAAGCTACGAAGGCAAGCAGATGTCCTCTGCGGAGATACCGCCAGCTCCCCAGGACGCAGACTGACTCCTGTTTGCTCGCTGGACCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431229.1
CDS CCA 90 bp ACCTGGCTCCAAACCAAGCAAGAGCCCGGAGGCCTCACCAAGTTCTaGTTATCCGGGTGGGCTCTAGAGCTAGGCCAGTGGGCTAACTCC +
Preference number: 5 (lower is better)
Translates to: TWLQTKQEPGGLTKF*LSGWALELGQWANS
Trigger: GGAGTTAGCCCACTGGCCTAGCTCTAGAGCCCACCCGGATAACCAGAACTTGGTGAGGCCTCCGGGCTCTTGCTTGGTTTGGAGCCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460783.1
CDS GCA 90 bp GGTAGGAGAAGGGCAGGCTGTAGGATGGCGTGTACAGAAGGTCACTaGTTTCTGAGTGGGGCTGCAGTTCTGGAGGAGCAGCAGCGCTTG +
Preference number: 5 (lower is better)
Translates to: GRRRAGCRMACTEGH*FLSGAAVLEEQQRL
Trigger: CAAGCGCTGCTGCTCCTCCAGAACTGCAGCCCCACTCAGAAAGCAGTGACCTTCTGTACACGCCATCCTACAGCCTGCCCTTCTCCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290399.11
ENST00000431229.1
ENST00000481185.1
CDS CCA 90 bp CATGTCCTGCAGCTAAACCTCTGTTCCCACCTTCCACCTTCTGCCTaGGGTTGGTCCAGCGAGCAAACAGGAGTCAGTCTGCGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: HVLQLNLCSHLPPSA*GWSSEQTGVSLRPG
Trigger: CCCAGGACGCAGACTGACTCCTGTTTGCTCGCTGGACCAACCCCAGGCAGAAGGTGGAAGGTGGGAACAGAGGTTTAGCTGCAGGACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481185.1
CDS GCA 90 bp CTGCGTCCTGGGGAGCTGGCGGTATCTCCGCAGAGGACATCTGCTTaGCTGCCACCAGGAGAAGGTGAAAGGCCATTCCTTTCTGTTGAA +
Preference number: 5 (lower is better)
Translates to: LRPGELAVSPQRTSA*LPPGEGERPFLSVE
Trigger: TTCAACAGAAAGGAATGGCCTTTCACCTTCTCCTGGTGGCAGGCAAGCAGATGTCCTCTGCGGAGATACCGCCAGCTCCCCAGGACGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481185.1
CDS CCA 90 bp GGAGCAGCAGCGCTTGCAGGGGGACTGGCTCTCCAGTTTCCGAGCTaGCCGCATTCCAGTTTGTCCATTTGGAACGAGCTGTATTGCTGT +
Preference number: 5 (lower is better)
Translates to: GAAALAGGLALQFPS*PHSSLSIWNELYCC
Trigger: ACAGCAATACAGCTCGTTCCAAATGGACAAACTGGAATGCGGCCAGCTCGGAAACTGGAGAGCCAGTCCCCCTGCAAGCGCTGCTGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290399.11
ENST00000431229.1
ENST00000481185.1
CDS-3UTR CAA 90 bp GTGCGTGGAGAGGCGGGCACATCCCTTCCTACCATCCAGCCCCTTCGCTGCATGTGGGCCAGAGGGATTTaGCCACGTAATAATGAAGCT +
Preference number: 5 (lower is better)
Translates to: VRGEAGTSLPTIQPLRCMWARGI*PRNNEA
Trigger: AGCTTCATTATTACGTGGCAAAATCCCTCTGGCCCA...CATGCAGCGAAGGGGCTGGATGGTAGGAAGGGATGTGCCCGCCTCTCCACGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS TCA 90 bp CAAGCCCTACTTAGAAGCAGAAAGAGGGCAAGTTTGCCCAAAGCGTaGGGGTTCTGTCTCCATCTGCCACCCACCGCCATGGCTGCTTCG +
Preference number: 5 (lower is better)
Translates to: QALLRSRKRASLPKA*GFCLHLPPTAMAAS
Trigger: CGAAGCAGCCATGGCGGTGGGTGGCAGATGGAGACAGAACCCTCACGCTTTGGGCAAACTTGCCCTCTTTCTGCTTCTAAGTAGGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481185.1
CDS-3UTR CAA 90 bp CCTGGAATTCTGACCCAAGAGCACGAGGGGAGCAGGCTTGCACCACTTTTGTCCGTCATGCCCAGCCACTaGGCAGATGTGGGAAGCAAA +
Preference number: 5 (lower is better)
Translates to: PGILTQEHEGSRLAPLLSVMPSH*ADVGSK
Trigger: TTTGCTTCCCACATCTGCCAAGTGGCTGGGCATGAC...GGACAAAAGTGGTGCAAGCCTGCTCCCCTCGTGCTCTTGGGTCAGAATTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483178.2
CDS GCA 90 bp AATACATGTCCTGCAGCTAAACCTCTGTTCCCACCTTCCACCTTCTaGCTGGGGTTGGTCCAGCGAGCAAACAGGAGTCAGTCTGCGTCC +
Preference number: 5 (lower is better)
Translates to: NTCPAAKPLFPPSTF*LGLVQRANRSQSAS
Trigger: GGACGCAGACTGACTCCTGTTTGCTCGCTGGACCAACCCCAGGCAGAAGGTGGAAGGTGGGAACAGAGGTTTAGCTGCAGGACATGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481185.1
CDS-3UTR CAA 90 bp ACTCTTACCATGAGGCCCACTGACAGACACCCTGTAGGGATTGTGTCAGGTCCTCTGCAGTGGATGACCTaGTATCCGCTGCAGGTCAGG +
Preference number: 5 (lower is better)
Translates to: TLTMRPTDRHPVGIVSGPLQWMT*YPLQVR
Trigger: CCTGACCTGCAGCGGATACAAGGTCATCCACTGCAG...AGGACCTGACACAATCCCTACAGGGTGTCTGTCAGTGGGCCTCATGGTAAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS GCA 90 bp TCCCCGAGGCAGGCAGACTGCCATTTCTCACTCTCGAGGAGCACCTaGATTGAGAGCAAGAAAGCACAGCAAGCCCTACTTAGAAGCAGA +
Preference number: 5 (lower is better)
Translates to: SPRQADCHFSLSRST*IESKKAQQALLRSR
Trigger: TCTGCTTCTAAGTAGGGCTTGCTGTGCTTTCTTGCTCTCAATGCAGGTGCTCCTCGAGAGTGAGAAATGGCAGTCTGCCTGCCTCGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481185.1
CDS-3UTR CAA 90 bp AGGACGGCGGTTCAATGCATTGTGCAGTTCAGAGCCATGACAGGATTTTTCCATCAGGAGTCCTGGGACTaGGCAGTGGACACCTGCTCC +
Preference number: 5 (lower is better)
Translates to: RTAVQCIVQFRAMTGFFHQESWD*AVDTCS
Trigger: GGAGCAGGTGTCCACTGCCAAGTCCCAGGACTCCTG...ATGGAAAAATCCTGTCATGGCTCTGAACTGCACAATGCATTGAACCGCCGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CAA 90 bp ACACAGGTATCAATGCAAATCCCCACGTGGTGGGTGCTGTGTGTGTATTGGAGAGGTGCTGTGTGTGTATaGGAGAGACCTGGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: TQVSMQIPTWWVLCVYWRGAVCV*ERPGLG
Trigger: GCCCAGCCCAGGTCTCTCCAATACACACACAGCACC...TCTCCAATACACACACAGCACCCACCACGTGGGGATTTGCATTGATACCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483178.2
CDS TCA 90 bp ATTTTAGTGGCACTGCAGGCATCTGCACCATCTCGGTCTACACTCTaGGCGGCAGTTAGGTCTCGGTGCAATGGGAATACATGTCCTGCA +
Preference number: 5 (lower is better)
Translates to: ILVALQASAPSRSTL*AAVRSRCNGNTCPA
Trigger: TGCAGGACATGTATTCCCATTGCACCGAGACCTAACTGCCGCTCAGAGTGTAGACCGAGATGGTGCAGATGCCTGCAGTGCCACTAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481185.1
CDS GCA 90 bp GTTAATATTGTATTATTGATGCTGTCTCTCCGTCCTTGCGCCCCTTaGACACACACAGCGGCCGAATGCTTCAGAGCTCAGAGCAGCCCA +
Preference number: 5 (lower is better)
Translates to: VNIVLLMLSLRPCAP*THTAAECFRAQSSP
Trigger: TGGGCTGCTCTGAGCTCTGAAGCATTCGGCCGCTGTGTGTGTGCAAGGGGCGCAAGGACGGAGAGACAGCATCAATAATACAATATTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460783.1
CDS GCA 90 bp AGTGCTCCTGTTAATATTGTATTATTGATGCTGTCTCTCCGTCCTTaGGCCCCTTGCACACACACAGCGGCCGAATGCTTCAGAGCTCAG +
Preference number: 5 (lower is better)
Translates to: SAPVNIVLLMLSLRP*APCTHTAAECFRAQ
Trigger: CTGAGCTCTGAAGCATTCGGCCGCTGTGTGTGTGCAAGGGGCGCAAGGACGGAGAGACAGCATCAATAATACAATATTAACAGGAGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460783.1
CDS-3UTR CAA 90 bp ACGGCGGTTCAATGCATTGTGCAGTTCAGAGCCATGACAGGATTTTTCCATGTTAGGTCTGCCGTCCACTaGGAAGAGCGGACTGTGGTA +
Preference number: 5 (lower is better)
Translates to: TAVQCIVQFRAMTGFFHVRSAVH*EERTVV
Trigger: TACCACAGTCCGCTCTTCCAAGTGGACGGCAGACCT...AACATGGAAAAATCCTGTCATGGCTCTGAACTGCACAATGCATTGAACCGCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CAA 90 bp AGGACGGCGGTTCAATGCATTGTGCAGTTCAGAGCCATGACAGGATTTTTCCATCTCTATCTCATACTCTaGGAGCAGGTGGTGGTGCAG +
Preference number: 5 (lower is better)
Translates to: RTAVQCIVQFRAMTGFFHLYLIL*EQVVVQ
Trigger: CTGCACCACCACCTGCTCCAAGAGTATGAGATAGAG...ATGGAAAAATCCTGTCATGGCTCTGAACTGCACAATGCATTGAACCGCCGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CAA 90 bp GTGGAAATCCGCAAGTCGGCGGCGGGGTCCAATTCAAACAGCTGTCTCTGCATAAGCTTGTTAATGTATTaGGGAAGCACACCTATGTTC +
Preference number: 5 (lower is better)
Translates to: VEIRKSAAGSNSNSCLCISLLMY*GSTPMF
Trigger: GAACATAGGTGTGCTTCCCAAATACATTAACAAGCT...TATGCAGAGACAGCTGTTTGAATTGGACCCCGCCGCCGACTTGCGGATTTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CAA 90 bp CCTACCATCCAGCCCCTTCGCTGCATGACCCACGGTCCTAAATTTGCAAATTGTGGGGGAAGTAAGAGCTaGTTAATGTATTTGGGAAGC +
Preference number: 5 (lower is better)
Translates to: PTIQPLRCMTHGPKFANCGGSKS*LMYLGS
Trigger: GCTTCCCAAATACATTAACAAGCTCTTACTTCCCCC...ACAATTTGCAAATTTAGGACCGTGGGTCATGCAGCGAAGGGGCTGGATGGTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CAA 90 bp CCTACCATCCAGCCCCTTCGCTGCATGACCCACGGTCCTAAATTTGCAAATTGTAAGTCAGTTCACATTTaGAGAGCAGTTGGTGTAGGT +
Preference number: 5 (lower is better)
Translates to: PTIQPLRCMTHGPKFANCKSVHI*RAVGVG
Trigger: ACCTACACCAACTGCTCTCAAAATGTGAACTGACTT...ACAATTTGCAAATTTAGGACCGTGGGTCATGCAGCGAAGGGGCTGGATGGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CAA 90 bp ACTCTTACCATGAGGCCCACTGACAGACACCCTGTAGGGATTGTGTCAGGTCCTGATATATACATGATTTaGCCATCAGATGCTACCACA +
Preference number: 5 (lower is better)
Translates to: TLTMRPTDRHPVGIVSGPDIYMI*PSDATT
Trigger: TGTGGTAGCATCTGATGGCAAAATCATGTATATATC...AGGACCTGACACAATCCCTACAGGGTGTCTGTCAGTGGGCCTCATGGTAAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CAA 90 bp ACAGTGGAGTTGTGTATTCATGGGACTTACAATCATCACTTCTGCCTTCACCTATGGCCGCATTCCAGTTaGTCCATTTGGAACGAGCTG +
Preference number: 5 (lower is better)
Translates to: TVELCIHGTYNHHFCLHLWPHSS*SIWNEL
Trigger: CAGCTCGTTCCAAATGGACAAACTGGAATGCGGCCA...TAGGTGAAGGCAGAAGTGATGATTGTAAGTCCCATGAATACACAACTCCACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CAA 90 bp CCTACCATCCAGCCCCTTCGCTGCATGACCCACGGTCCTAAATTTGCAAATTGTTTAAAGACAGTGGAGTaGTGTATTCATGGGACTTAC +
Preference number: 5 (lower is better)
Translates to: PTIQPLRCMTHGPKFANCLKTVE*CIHGTY
Trigger: GTAAGTCCCATGAATACACAACTCCACTGTCTTTAA...ACAATTTGCAAATTTAGGACCGTGGGTCATGCAGCGAAGGGGCTGGATGGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CAA 90 bp AAGGACGGCGGTTCAATGCATTGTGCAGTTCAGAGCCATGACAGGATTTTTCCACCCACGGTCCTAAATTaGCAAATTGTGACTCTTACC +
Preference number: 5 (lower is better)
Translates to: KDGGSMHCAVQSHDRIFPPTVLN*QIVTLT
Trigger: GGTAAGAGTCACAATTTGCAAATTTAGGACCGTGGG...TGGAAAAATCCTGTCATGGCTCTGAACTGCACAATGCATTGAACCGCCGTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CAA 90 bp AATATTGGCTTAAAAGACACAGGTATCAATGCAAATCCCCACGTGGTGGGTGCTTTTAGGCACGGCATCTaGGTTAAGGAGAAGCTTGGT +
Preference number: 5 (lower is better)
Translates to: NIGLKDTGINANPHVVGAFRHGI*VKEKLG
Trigger: ACCAAGCTTCTCCTTAACCAAGATGCCGTGCCTAAA...AGCACCCACCACGTGGGGATTTGCATTGATACCTGTGTCTTTTAAGCCAATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483178.2
CDS CCA 90 bp ATAGCCAATAGGCCGTTTGTCTCAAATATTCACTTCTGGTTGGAGTaGAAAGGAATCTTGCAAAAGAAATGCAGCTGGGGTGTTCTCAGC +
Preference number: 5 (lower is better)
Translates to: IANRPFVSNIHFWLE*KGILQKKCSWGVLS
Trigger: GCTGAGAACACCCCAGCTGCATTTCTTTTGCAAGATTCCTTTCCACTCCAACCAGAAGTGAATATTTGAGACAAACGGCCTATTGGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481185.1
CDS-3UTR CAA 90 bp ACAGTGGAGTTGTGTATTCATGGGACTTACAATCATCACTTCTGCCTTCACCTAATGTTACTGTACAGCTaGATCTCGGTGATGGCACTG +
Preference number: 5 (lower is better)
Translates to: TVELCIHGTYNHHFCLHLMLLYS*ISVMAL
Trigger: CAGTGCCATCACCGAGATCAAGCTGTACAGTAACAT...TAGGTGAAGGCAGAAGTGATGATTGTAAGTCCCATGAATACACAACTCCACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CAA 90 bp ATGCCTATTCAATATATTCTGAAGGTGCTACTCTTGGTGTTATCAAGAGTTCATGACTGTTGTGGAACGTaGGGGACAAGGCAAGACGCG +
Preference number: 5 (lower is better)
Translates to: MPIQYILKVLLLVLSRVHDCCGT*GTRQDA
Trigger: CGCGTCTTGCCTTGTCCCCAACGTTCCACAACAGTC...ATGAACTCTTGATAACACCAAGAGTAGCACCTTCAGAATATATTGAATAGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS-3UTR CAA 90 bp ACAGTGGAGTTGTGTATTCATGGGACTTACAATCATCACTTCTGCCTTCACCTATTCCAGTTTGTCCATTaGGAACGAGCTGTATTGCTG +
Preference number: 5 (lower is better)
Translates to: TVELCIHGTYNHHFCLHLFQFVH*ERAVLL
Trigger: CAGCAATACAGCTCGTTCCAAATGGACAAACTGGAA...TAGGTGAAGGCAGAAGTGATGATTGTAAGTCCCATGAATACACAACTCCACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS TCA 90 bp CCTGGGATAAGCCTAAATGGACAGAAGCGGTCTCGGATATATACATaGTTTTGCCATCAGATGCTACCACAAAAACAAATCCATCCAAAG +
Preference number: 5 (lower is better)
Translates to: PGISLNGQKRSRIYT*FCHQMLPQKQIHPK
Trigger: CTTTGGATGGATTTGTTTTTGTGGTAGCATCTGATGGCAAAATCATGTATATATCCGAGACCGCTTCTGTCCATTTAGGCTTATCCCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290399.11
ENST00000431229.1
ENST00000481185.1
CDS TCA 72 bp CCAGCGGTCCGCGCCGGGCCAGCACGCGGTGGTAGTTaGGCAGCACGAAGGGCAGCTGCGCCGGCGCGCCCG +
Preference number: 6 (lower is better)
Translates to: PAVRAGPARGGS*AARRAAAPARP
Trigger: CGGGCGCGCCGGCGCAGCTGCCCTTCGTGCTGCTCAACTACCACCGCGTGCTGGCCCGGCGCGGACCGCTGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS CCA 72 bp CGCCCGCCGCTGCCCGGAGCGCAGCCTCCTCCGGGCTaGACCGTCCTGCAGCAACCGGAGCCCCGTTCCTGC +
Preference number: 6 (lower is better)
Translates to: RPPLPGAQPPPG*TVLQQPEPRSC
Trigger: GCAGGAACGGGGCTCCGGTTGCTGCAGGACGGTCCAGCCCGGAGGAGGCTGCGCTCCGGGCAGCGGCGGGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290399.11
ENST00000460783.1
ENST00000481185.1
CDS GCA 72 bp TCGGGAAGCTCGGGGGCGCGGTGTCCTCGCCGAACCTaGGCACGGCGGCGGCGGGCGCTTCGTAGCTTGGCA +
Preference number: 6 (lower is better)
Translates to: SGSSGARCPRRT*ARRRRALRSLA
Trigger: TGCCAAGCTACGAAGCGCCCGCCGCCGCCGTGCGCAGGTTCGGCGAGGACACCGCGCCCCCGAGCTTCCCGA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290399.11
CDS CCA 72 bp GCCGCTCTACCTGCAGCAAGTGCGATCCCAGCTCCTTaGCGACGCCGTCCAGGGGCCCGGCGCGGCTCGGCT +
Preference number: 6 (lower is better)
Translates to: AALPAASAIPAP*RRRPGARRGSA
Trigger: AGCCGAGCCGCGCCGGGCCCCTGGACGGCGTCGCCAAGGAGCTGGGATCGCACTTGCTGCAGGTAGAGCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460783.1
CDS GCA 72 bp CGCGGAGGCGGAGGCGCTGCTTACTCCTTCGTCGAGTaGTCGAACCGGCTGCGGCAAGGCCCCTCCGGACCG +
Preference number: 6 (lower is better)
Translates to: RGGGGAAYSFVE*SNRLRQGPSGP
Trigger: CGGTCCGGAGGGGCCTTGCCGCAGCCGGTTCGAGCACTCGACGAAGGAGTAAGCAGCGCCTCCGCCTCCGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290399.11
ENST00000460783.1
ENST00000481185.1
CDS GCA 72 bp TGCCCGGAGCGCAGCCTCCTCCGGGCTGGACCGTCCTaGAGCAACCGGAGCCCCGTTCCTGCTCGCTCCTGT +
Preference number: 6 (lower is better)
Translates to: CPERSLLRAGPS*SNRSPVPARSC
Trigger: ACAGGAGCGAGCAGGAACGGGGCTCCGGTTGCTGCAGGACGGTCCAGCCCGGAGGAGGCTGCGCTCCGGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290399.11
ENST00000460783.1
ENST00000481185.1
CDS GCA 72 bp CTCCTCCCCCGGCGAGGCCGCTCTACCTGCAGCAAGTaGGATCCCAGCTCCTTGGCGACGCCGTCCAGGGGC +
Preference number: 6 (lower is better)
Translates to: LLPRRGRSTCSK*DPSSLATPSRG
Trigger: GCCCCTGGACGGCGTCGCCAAGGAGCTGGGATCGCACTTGCTGCAGGTAGAGCGGCCTCGCCGGGGGAGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460783.1
CDS GCA 72 bp GCGCTGCTTACTCCTTCGTCGAGTGCTCGAACCGGCTaGGGCAAGGCCCCTCCGGACCGGAGGGCGACAGGG +
Preference number: 6 (lower is better)
Translates to: ALLTPSSSARTG*GKAPPDRRATG
Trigger: CCCTGTCGCCCTCCGGTCCGGAGGGGCCTTGCCGCAGCCGGTTCGAGCACTCGACGAAGGAGTAAGCAGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290399.11
ENST00000460783.1
ENST00000481185.1
CDS CCA 72 bp TGTGTCCCCAGCCAGCGCCAACAGCCCACCTGGAAGTaGCGAGCTGTGCTCAGGGCTACCCGGCCGACCCGC +
Preference number: 6 (lower is better)
Translates to: CVPSQRQQPTWK*RAVLRATRPTR
Trigger: GCGGGTCGGCCGGGTAGCCCTGAGCACAGCTCGCCACTTCCAGGTGGGCTGTTGGCGCTGGCTGGGGACACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460783.1
CDS CAA 90 bp GGGCCTTCGGCGGGGTGTGGGGGCAGACGTAGGGTTAGGGTAGGGTaGGCCGCAGGCCGCATCCGACATGCTAAGCGTCCATCCCTCCGC +
Preference number: 6 (lower is better)
Translates to: GPSAGCGGRRRVRVG*AAGRIRHAKRPSLR
Trigger: GCGGAGGGATGGACGCTTAGCATGTCGGATGCGGCCTGCGGCCAACCCTACCCTAACCCTACGTCTGCCCCCACACCCCGCCGAAGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460783.1
CDS CCA 72 bp CATCCAAAGTCTGCAGCAAGTGCGATCCCAGCTCCTTaGCGACGCCGTCCAGGGGCCCGGCGCGGCTCGGCT +
Preference number: 6 (lower is better)
Translates to: HPKSAASAIPAP*RRRPGARRGSA
Trigger: AGCCGAGCCGCGCCGGGCCCCTGGACGGCGTCGCCAAGGAGCTGGGATCGCACTTGCTGCAGACTTTGGATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290399.11
ENST00000431229.1
ENST00000481185.1
CDS CCA 72 bp TCGGGATGTGTCCCCAGCCAGCGCCAACAGCCCACCTaGAAGTGGCGAGCTGTGCTCAGGGCTACCCGGCCG +
Preference number: 6 (lower is better)
Translates to: SGCVPSQRQQPT*KWRAVLRATRP
Trigger: CGGCCGGGTAGCCCTGAGCACAGCTCGCCACTTCCAGGTGGGCTGTTGGCGCTGGCTGGGGACACATCCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460783.1
CDS CCA 72 bp AGGGTGAATGGCCCCGGGCTCGGGGCGCTAAGCACCTaGCTCCAAACCAAGCAAGAGCCCGGAGGCCTCACC +
Preference number: 6 (lower is better)
Translates to: RVNGPGLGALST*LQTKQEPGGLT
Trigger: GGTGAGGCCTCCGGGCTCTTGCTTGGTTTGGAGCCAGGTGCTTAGCGCCCCGAGCCCGGGGCCATTCACCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460783.1
CDS CCA 72 bp ATTGGAAAGCACTTGACCACGCTCGGGAGGCGCCCCTaGCGTAGGTCTCAGGTGGCCTGGGGAGTCCTGGGG +
Preference number: 6 (lower is better)
Translates to: IGKHLTTLGRRP*RRSQVAWGVLG
Trigger: CCCCAGGACTCCCCAGGCCACCTGAGACCTACGCCAGGGGCGCCTCCCGAGCGTGGTCAAGTGCTTTCCAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460783.1
CDS CAA 72 bp GCGGGGTGTGGGGGCAGACGTAGGGTTAGGGTAGGGTaGGCCGCAGGCCGCATCCGACATGCTAAGCGTCCA +
Preference number: 6 (lower is better)
Translates to: AGCGGRRRVRVG*AAGRIRHAKRP
Trigger: TGGACGCTTAGCATGTCGGATGCGGCCTGCGGCCAACCCTACCCTAACCCTACGTCTGCCCCCACACCCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460783.1
CDS TCA 72 bp CGTGCGCAGTCCTCCCACCTTCCCCACGAGCAGACCTaGCCCACCTTCGTAGCTTGGCACCAGGCTGTGCCT +
Preference number: 6 (lower is better)
Translates to: RAQSSHLPHEQT*PTFVAWHQAVP
Trigger: AGGCACAGCCTGGTGCCAAGCTACGAAGGTGGGTCAGGTCTGCTCGTGGGGAAGGTGGGAGGACTGCGCACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481185.1
CDS GCA 72 bp CAAGTTTGCCCAAAGCGTGAGGGTTCTGTCTCCATCTaGCACCCACCGCCATGGCTGCTTCGGCTCCCGGCC +
Preference number: 6 (lower is better)
Translates to: QVCPKREGSVSI*HPPPWLLRLPA
Trigger: GGCCGGGAGCCGAAGCAGCCATGGCGGTGGGTGGCAGATGGAGACAGAACCCTCACGCTTTGGGCAAACTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481185.1
CDS GCA 72 bp CCTGGGGTTGGTCCAGCGAGCAAACAGGAGTCAGTCTaGGTCCTGGGGAGCTGGCGGTATCTCCGCAGAGGA +
Preference number: 6 (lower is better)
Translates to: PGVGPASKQESV*VLGSWRYLRRG
Trigger: TCCTCTGCGGAGATACCGCCAGCTCCCCAGGACGCAGACTGACTCCTGTTTGCTCGCTGGACCAACCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481185.1
CDS CAA 90 bp AAGCGCTGGGTGGAACCTGCTGAGGGAAGTGAGATTGGAAAGCACTaGACCACGCTCGGGAGGCGCCCCTGGCGTAGGTCTCAGGTGGCC +
Preference number: 6 (lower is better)
Translates to: KRWVEPAEGSEIGKH*TTLGRRPWRRSQVA
Trigger: GGCCACCTGAGACCTACGCCAGGGGCGCCTCCCGAGCGTGGTCAAGTGCTTTCCAATCTCACTTCCCTCAGCAGGTTCCACCCAGCGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460783.1
CDS CCA 72 bp GAGCCCGGAGGCCTCACCAAGTTCTGGTTATCCGGGTaGGCTCTAGAGCTAGGCCAGTGGGCTAACTCCGCT +
Preference number: 6 (lower is better)
Translates to: EPGGLTKFWLSG*ALELGQWANSA
Trigger: AGCGGAGTTAGCCCACTGGCCTAGCTCTAGAGCCCACCCGGATAACCAGAACTTGGTGAGGCCTCCGGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460783.1
CDS CCA 72 bp GCGAGCAAACAGGAGTCAGTCTGCGTCCTGGGGAGCTaGCGGTATCTCCGCAGAGGACATCTGCTTGCCTGC +
Preference number: 6 (lower is better)
Translates to: ASKQESVCVLGS*RYLRRGHLLAC
Trigger: GCAGGCAAGCAGATGTCCTCTGCGGAGATACCGCCAGCTCCCCAGGACGCAGACTGACTCCTGTTTGCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481185.1
CDS TCA 72 bp TGGAACCTGCTGAGGGAAGTGAGATTGGAAAGCACTTaGCCACGCTCGGGAGGCGCCCCTGGCGTAGGTCTC +
Preference number: 6 (lower is better)
Translates to: WNLLREVRLEST*PRSGGAPGVGL
Trigger: GAGACCTACGCCAGGGGCGCCTCCCGAGCGTGGTCAAGTGCTTTCCAATCTCACTTCCCTCAGCAGGTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460783.1
CDS CCA 72 bp TCTTGTGAGGTAGACAAGGCGGTCCTCCAGGAGTCCTaGGACTTGGCAGTGGACACCTGCTCCAGGGACAGC +
Preference number: 6 (lower is better)
Translates to: SCEVDKAVLQES*DLAVDTCSRDS
Trigger: GCTGTCCCTGGAGCAGGTGTCCACTGCCAAGTCCCAGGACTCCTGGAGGACCGCCTTGTCTACCTCACAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290399.11
ENST00000431229.1
ENST00000481185.1
CDS CCA 72 bp GCGAGCAAACAGGAGTCAGTCTGCGTCCTGGGGAGCTaGCGGTATCTCCGCAGAGGACATCTGCTTGCCTTC +
Preference number: 6 (lower is better)
Translates to: ASKQESVCVLGS*RYLRRGHLLAF
Trigger: GAAGGCAAGCAGATGTCCTCTGCGGAGATACCGCCAGCTCCCCAGGACGCAGACTGACTCCTGTTTGCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431229.1
CDS CCA 72 bp TTGGTCCAGCGAGCAAACAGGAGTCAGTCTGCGTCCTaGGGAGCTGGCGGTATCTCCGCAGAGGACATCTGC +
Preference number: 6 (lower is better)
Translates to: LVQRANRSQSAS*GAGGISAEDIC
Trigger: GCAGATGTCCTCTGCGGAGATACCGCCAGCTCCCCAGGACGCAGACTGACTCCTGTTTGCTCGCTGGACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431229.1
ENST00000481185.1
CDS GCA 72 bp GGGGAGCTGGCGGTATCTCCGCAGAGGACATCTGCTTaGCTGCCACCAGGAGAAGGTGAAAGGCCATTCCTT +
Preference number: 6 (lower is better)
Translates to: GELAVSPQRTSA*LPPGEGERPFL
Trigger: AAGGAATGGCCTTTCACCTTCTCCTGGTGGCAGGCAAGCAGATGTCCTCTGCGGAGATACCGCCAGCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481185.1
CDS CCA 72 bp ACAAGGCGGTCCTCCAGGAGTCCTGGGACTTGGCAGTaGACACCTGCTCCAGGGACAGCTGAAGTTCCTTGT +
Preference number: 6 (lower is better)
Translates to: TRRSSRSPGTWQ*TPAPGTAEVPC
Trigger: ACAAGGAACTTCAGCTGTCCCTGGAGCAGGTGTCCACTGCCAAGTCCCAGGACTCCTGGAGGACCGCCTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290399.11
ENST00000431229.1
ENST00000481185.1
CDS CCA 72 bp GCGCTTGCAGGGGGACTGGCTCTCCAGTTTCCGAGCTaGCCGCATTCCAGTTTGTCCATTTGGAACGAGCTG +
Preference number: 6 (lower is better)
Translates to: ALAGGLALQFPS*PHSSLSIWNEL
Trigger: CAGCTCGTTCCAAATGGACAAACTGGAATGCGGCCAGCTCGGAAACTGGAGAGCCAGTCCCCCTGCAAGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290399.11
ENST00000431229.1
ENST00000481185.1
CDS CCA 72 bp CACCAGGCTGTGCCTAGCAGTGTTCGCCGGTGGCTCTaGAGGATTTTTAGCTGGAGACGAGCTGCTAGGCAC +
Preference number: 6 (lower is better)
Translates to: HQAVPSSVRRWL*RIFSWRRAARH
Trigger: GTGCCTAGCAGCTCGTCTCCAGCTAAAAATCCTCCAGAGCCACCGGCGAACACTGCTAGGCACAGCCTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290399.11
ENST00000431229.1
ENST00000481185.1
CDS CCA 72 bp GCTTGGCACCAGGCTGTGCCTAGCAGTGTTCGCCGGTaGCTCTGGAGGATTTTTAGCTGGAGACGAGCTGCT +
Preference number: 6 (lower is better)
Translates to: AWHQAVPSSVRR*LWRIFSWRRAA
Trigger: AGCAGCTCGTCTCCAGCTAAAAATCCTCCAGAGCCACCGGCGAACACTGCTAGGCACAGCCTGGTGCCAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290399.11
ENST00000431229.1
ENST00000481185.1
CDS CCA 72 bp CAAACCAAGCAAGAGCCCGGAGGCCTCACCAAGTTCTaGTTATCCGGGTGGGCTCTAGAGCTAGGCCAGTGG +
Preference number: 6 (lower is better)
Translates to: QTKQEPGGLTKF*LSGWALELGQW
Trigger: CCACTGGCCTAGCTCTAGAGCCCACCCGGATAACCAGAACTTGGTGAGGCCTCCGGGCTCTTGCTTGGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460783.1
CDS GCA 72 bp AGGGCAGGCTGTAGGATGGCGTGTACAGAAGGTCACTaGTTTCTGAGTGGGGCTGCAGTTCTGGAGGAGCAG +
Preference number: 6 (lower is better)
Translates to: RAGCRMACTEGH*FLSGAAVLEEQ
Trigger: CTGCTCCTCCAGAACTGCAGCCCCACTCAGAAAGCAGTGACCTTCTGTACACGCCATCCTACAGCCTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290399.11
ENST00000431229.1
ENST00000481185.1
CDS GCA 72 bp CGTCCTTGCGCCCCTTGCACACACACAGCGGCCGAATaGTTCAGAGCTCAGAGCAGCCCAATCATTTCTGCT +
Preference number: 6 (lower is better)
Translates to: RPCAPCTHTAAE*FRAQSSPIISA
Trigger: AGCAGAAATGATTGGGCTGCTCTGAGCTCTGAAGCATTCGGCCGCTGTGTGTGTGCAAGGGGCGCAAGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460783.1
CDS GCA 72 bp CCTGCAGCTAAACCTCTGTTCCCACCTTCCACCTTCTaGCTGGGGTTGGTCCAGCGAGCAAACAGGAGTCAG +
Preference number: 6 (lower is better)
Translates to: PAAKPLFPPSTF*LGLVQRANRSQ
Trigger: CTGACTCCTGTTTGCTCGCTGGACCAACCCCAGGCAGAAGGTGGAAGGTGGGAACAGAGGTTTAGCTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481185.1
CDS CCA 72 bp GGATCCTTGGGGCTGCCCGAACTTGGCCGGCAACATTaGCTTTTTGCTGCTGAAGACGTGAGAGTCCAGAGG +
Preference number: 6 (lower is better)
Translates to: GSLGLPELGRQH*LFAAEDVRVQR
Trigger: CCTCTGGACTCTCACGTCTTCAGCAGCAAAAAGCCAATGTTGCCGGCCAAGTTCGGGCAGCCCCAAGGATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290399.11
ENST00000431229.1
ENST00000481185.1
CDS CCA 72 bp CTCAGGAAAAAGCGTGCCACCTCACAAGGGGATCCTTaGGGCTGCCCGAACTTGGCCGGCAACATTGGCTTT +
Preference number: 6 (lower is better)
Translates to: LRKKRATSQGDP*GCPNLAGNIGF
Trigger: AAAGCCAATGTTGCCGGCCAAGTTCGGGCAGCCCCAAGGATCCCCTTGTGAGGTGGCACGCTTTTTCCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290399.11
ENST00000431229.1
ENST00000481185.1
CDS CCA 72 bp GGGGTTGGCATAATGCCACTGGCATTCACCGCTGGCTaGCAGTGTGCTCAGGAAAAAGCGTGCCACCTCACA +
Preference number: 6 (lower is better)
Translates to: GVGIMPLAFTAG*QCAQEKACHLT
Trigger: TGTGAGGTGGCACGCTTTTTCCTGAGCACACTGCCAGCCAGCGGTGAATGCCAGTGGCATTATGCCAACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290399.11
ENST00000431229.1
ENST00000481185.1
CDS CCA 72 bp CTAGGGGGTTGGCATAATGCCACTGGCATTCACCGCTaGCTGGCAGTGTGCTCAGGAAAAAGCGTGCCACCT +
Preference number: 6 (lower is better)
Translates to: LGGWHNATGIHR*LAVCSGKSVPP
Trigger: AGGTGGCACGCTTTTTCCTGAGCACACTGCCAGCCAGCGGTGAATGCCAGTGGCATTATGCCAACCCCCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290399.11
ENST00000431229.1
ENST00000481185.1
CDS TCA 72 bp CTTAGAAGCAGAAAGAGGGCAAGTTTGCCCAAAGCGTaGGGGTTCTGTCTCCATCTGCCACCCACCGCCATG +
Preference number: 6 (lower is better)
Translates to: LRSRKRASLPKA*GFCLHLPPTAM
Trigger: CATGGCGGTGGGTGGCAGATGGAGACAGAACCCTCACGCTTTGGGCAAACTTGCCCTCTTTCTGCTTCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481185.1
CDS TCA 72 bp GCACTGCAGGCATCTGCACCATCTCGGTCTACACTCTaGGCGGCAGTTAGGTCTCGGTGCAATGGGAATACA +
Preference number: 6 (lower is better)
Translates to: ALQASAPSRSTL*AAVRSRCNGNT
Trigger: TGTATTCCCATTGCACCGAGACCTAACTGCCGCTCAGAGTGTAGACCGAGATGGTGCAGATGCCTGCAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481185.1
CDS GCA 72 bp GTATTATTGATGCTGTCTCTCCGTCCTTGCGCCCCTTaGACACACACAGCGGCCGAATGCTTCAGAGCTCAG +
Preference number: 6 (lower is better)
Translates to: VLLMLSLRPCAP*THTAAECFRAQ
Trigger: CTGAGCTCTGAAGCATTCGGCCGCTGTGTGTGTGCAAGGGGCGCAAGGACGGAGAGACAGCATCAATAATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460783.1
CDS GCA 72 bp GGTGAAGAAACTGAGGCCTGGAGGGTTTGTGTTCTTTaGCCTGGGTTGGTGAGTGGCATTTCTGTCCCCAAG +
Preference number: 6 (lower is better)
Translates to: GEETEAWRVCVL*PGLVSGISVPK
Trigger: CTTGGGGACAGAAATGCCACTCACCAACCCAGGGCAAAGAACACAAACCCTCCAGGCCTCAGTTTCTTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481185.1
CDS CAA 72 bp TGTATTATTGATGCTGTCTCTCCGTCCTTGCGCCCCTaGCACACACACAGCGGCCGAATGCTTCAGAGCTCA +
Preference number: 6 (lower is better)
Translates to: CIIDAVSPSLRP*HTHSGRMLQSS
Trigger: TGAGCTCTGAAGCATTCGGCCGCTGTGTGTGTGCAAGGGGCGCAAGGACGGAGAGACAGCATCAATAATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460783.1
CDS GCA 72 bp CAGGCAGACTGCCATTTCTCACTCTCGAGGAGCACCTaGATTGAGAGCAAGAAAGCACAGCAAGCCCTACTT +
Preference number: 6 (lower is better)
Translates to: QADCHFSLSRST*IESKKAQQALL
Trigger: AAGTAGGGCTTGCTGTGCTTTCTTGCTCTCAATGCAGGTGCTCCTCGAGAGTGAGAAATGGCAGTCTGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481185.1
CDS CAA 72 bp CATGTACAGGGCAGGTCCCTACTGTGTGTCGTGTCCTaGGGAGTAGGCACATCACAGCTTCACCCCATTTTA +
Preference number: 6 (lower is better)
Translates to: HVQGRSLLCVVS*GVGTSQLHPIL
Trigger: TAAAATGGGGTGAAGCTGTGATGTGCCTACTCCCAAGGACACGACACACAGTAGGGACCTGCCCTGTACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481185.1
CDS CAA 90 bp GAATGTGGCCAGGATTTACGTGAAGGCCAGATACTCGGTTTTCCTTaGCCCTTTATACTGTCACTAGTGTCCCCGAGGCAGGCAGACTGC +
Preference number: 6 (lower is better)
Translates to: ECGQDLREGQILGFP*PFILSLVSPRQADC
Trigger: GCAGTCTGCCTGCCTCGGGGACACTAGTGACAGTATAAAGGGCAAAGGAAAACCGAGTATCTGGCCTTCACGTAAATCCTGGCCACATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481185.1
CDS TCA 72 bp TCTAGATGGGAGGGGGAAGTCAATAAGGTCCGGAACTaGATGTGGCTTGCAGTAAGCTCTGGACAAGTGCTC +
Preference number: 6 (lower is better)
Translates to: SRWEGEVNKVRN*MWLAVSSGQVL
Trigger: GAGCACTTGTCCAGAGCTTACTGCAAGCCACATTCAGTTCCGGACCTTATTGACTTCCCCCTCCCATCTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460783.1
CDS CAA 72 bp CAGGATTTACGTGAAGGCCAGATACTCGGTTTTCCTTaGCCCTTTATACTGTCACTAGTGTCCCCGAGGCAG +
Preference number: 6 (lower is better)
Translates to: QDLREGQILGFP*PFILSLVSPRQ
Trigger: CTGCCTCGGGGACACTAGTGACAGTATAAAGGGCAAAGGAAAACCGAGTATCTGGCCTTCACGTAAATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481185.1
CDS CCA 72 bp CTGTTGCCCGTGAGCTCCACCTGGGATAAGCCTAAATaGACAGAAGCGGTCTCGGATATATACATGATTTTG +
Preference number: 6 (lower is better)
Translates to: LLPVSSTWDKPK*TEAVSDIYMIL
Trigger: CAAAATCATGTATATATCCGAGACCGCTTCTGTCCATTTAGGCTTATCCCAGGTGGAGCTCACGGGCAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290399.11
ENST00000431229.1
ENST00000481185.1
ENST00000483178.2
CDS CAA 90 bp CCGTTTGTCTCAAATATTCACTTCTGGTTGGAGTGGAAAGGAATCTaGCAAAAGAAATGCAGCTGGGGTGTTCTCAGCACATGGGAGCTG +
Preference number: 6 (lower is better)
Translates to: PFVSNIHFWLEWKGI*QKKCSWGVLSTWEL
Trigger: CAGCTCCCATGTGCTGAGAACACCCCAGCTGCATTTCTTTTGCAAGATTCCTTTCCACTCCAACCAGAAGTGAATATTTGAGACAAACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481185.1
CDS CAA 90 bp GATAAGCCTAAATGGACAGAAGCGGTCTCGGATATATACATGATTTaGCCATCAGATGCTACCACAAAAACAAATCCATCCAAAGTCTGC +
Preference number: 6 (lower is better)
Translates to: DKPKWTEAVSDIYMI*PSDATTKTNPSKVC
Trigger: GCAGACTTTGGATGGATTTGTTTTTGTGGTAGCATCTGATGGCAAAATCATGTATATATCCGAGACCGCTTCTGTCCATTTAGGCTTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290399.11
ENST00000431229.1
ENST00000481185.1
CDS TCA 72 bp AGCCTAAATGGACAGAAGCGGTCTCGGATATATACATaGTTTTGCCATCAGATGCTACCACAAAAACAAATC +
Preference number: 6 (lower is better)
Translates to: SLNGQKRSRIYT*FCHQMLPQKQI
Trigger: GATTTGTTTTTGTGGTAGCATCTGATGGCAAAATCATGTATATATCCGAGACCGCTTCTGTCCATTTAGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290399.11
ENST00000431229.1
ENST00000481185.1
CDS CAA 72 bp AAATGGACAGAAGCGGTCTCGGATATATACATGATTTaGCCATCAGATGCTACCACAAAAACAAATCCATCC +
Preference number: 6 (lower is better)
Translates to: KWTEAVSDIYMI*PSDATTKTNPS
Trigger: GGATGGATTTGTTTTTGTGGTAGCATCTGATGGCAAAATCATGTATATATCCGAGACCGCTTCTGTCCATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290399.11
ENST00000431229.1
ENST00000481185.1