RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SIL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000120725

Ensembl transcript IDs: ENST00000265195.9, ENST00000394817.7, ENST00000440765.2, ENST00000503732.1, ENST00000504666.5, ENST00000505353.1, ENST00000505830.5, ENST00000505945.1, ENST00000507002.5, ENST00000508639.5, ENST00000508744.1, ENST00000509400.5, ENST00000509534.5, ENST00000513453.5, ENST00000515008.1

Found 233 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGAGCCTGTTCCTaGATGCCCTGGGCTGAGCCCTGCACGTCAGCAGAGCCCATCACC +
Preference number: 1 (lower is better)
Translates to: DLQLLGPGSCPGACS*MPWAEPCTSAEPIT
Trigger: GGTGATGGGCTCTGCTGACGTGCAGGGCTCAGCCCAGGGCATCCAGGAACAGGCTCCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
3UTR GCA 90 bp GGAAACAAGCTCAGAGCAATTAAGCGACTTCCCAAGGTACAGAGCTaGTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGT +
Preference number: 1 (lower is better)
Translates to: GNKLRAIKRLPKVQS*CLVRSRDLQLLGPG
Trigger: ACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTACCTTGGGAAGTCGCTTAATTGCTCTGAGCTTGTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
3UTR-3UTR TCA 90 bp AGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGAGCCTGTTCCTGGATGAGATGTCCTCCTGCCTaGGAAGCCCACCCACGCTGG +
Preference number: 2 (lower is better)
Translates to: RDLQLLGPGSCPGACSWMRCPPA*EAHPRW
Trigger: CCAGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCT...CATCCAGGAACAGGCTCCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
3UTR-3UTR TCA 90 bp AAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGAGCCTGTTCCTGGATGCCCTGGGCTaGGCCCTGCACGTCAGCAGA +
Preference number: 2 (lower is better)
Translates to: KKQRLATPGPRFLPWSLFLDALG*ALHVSR
Trigger: TCTGCTGACGTGCAGGGCTCAGCCCAGGGCATCCAG...GAACAGGCTCCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
3UTR-3UTR GCA 90 bp CTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGCCCTGGGCTGAGCCCTaGACGTCAGCAGAGCCCATC +
Preference number: 2 (lower is better)
Translates to: LLGKKQRLATPGPRFLPWPWAEP*TSAEPI
Trigger: GATGGGCTCTGCTGACGTGCAGGGCTCAGCCCAGGG...CCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
3UTR-3UTR CCA 90 bp GAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGAGCCTGTTCCTGAAGCCCACCCACGCTaGCACCCCTCAGCCTCACTA +
Preference number: 2 (lower is better)
Translates to: EAETCNSWAQVPALEPVPEAHPR*HPSASL
Trigger: TAGTGAGGCTGAGGGGTGCCAGCGTGGGTGGGCTTC...AGGAACAGGCTCCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
3UTR-3UTR GCA 90 bp AGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGAGCCTGTTCCTGGATGCCGGCCACAGGGCTGTaGCCAGTCTACACAGACACA +
Preference number: 2 (lower is better)
Translates to: RDLQLLGPGSCPGACSWMPATGL*PVYTDT
Trigger: TGTGTCTGTGTAGACTGGGCACAGCCCTGTGGCCGG...CATCCAGGAACAGGCTCCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
3UTR-3UTR TCA 90 bp CCCAAGGTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCTGGATGCCCTGGGCTaGGCCCTGCACGTCAGCAGA +
Preference number: 2 (lower is better)
Translates to: PKVQSCCLVRSRDLQLLGLDALG*ALHVSR
Trigger: TCTGCTGACGTGCAGGGCTCAGCCCAGGGCATCCAG...GCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTACCTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
3UTR CAA 90 bp CGACTTCCCAAGGTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTaGCAACTCCTGGGCCCAGGTTCCTGCCCTGGAGCCTGTTCCTGG +
Preference number: 2 (lower is better)
Translates to: RLPKVQSCCLVRSRD*QLLGPGSCPGACSW
Trigger: CCAGGAACAGGCTCCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTACCTTGGGAAGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
3UTR-3UTR GCA 90 bp GGTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGCCGGCCACAGGGCTGTaGCCAGTCTACACAGACACA +
Preference number: 2 (lower is better)
Translates to: GTELLLGKKQRLATPGPRPATGL*PVYTDT
Trigger: TGTGTCTGTGTAGACTGGGCACAGCCCTGTGGCCGG...CCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
3UTR-3UTR TCA 90 bp TCCCAAGGTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGAGATGTCCTCCTGCCTaGGAAGCCCACCCACGCTGG +
Preference number: 2 (lower is better)
Translates to: SQGTELLLGKKQRLATPGRCPPA*EAHPRW
Trigger: CCAGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCT...CCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTACCTTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
3UTR GCA 72 bp AGAGCAATTAAGCGACTTCCCAAGGTACAGAGCTGCTaGTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGC +
Preference number: 3 (lower is better)
Translates to: RAIKRLPKVQSC*LVRSRDLQLLG
Trigger: GCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTACCTTGGGAAGTCGCTTAATTGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp CCAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTGGCCGGCGAGCACCTCCGTaGCCTTCTCCTGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: PSQHCQDVLLPEKPTHAGRRAPP*PSPAPG
Trigger: CCCTGGTGCAGGAGAAGGGCACGGAGGTGCTCGCCG...GCCAGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp AGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGAGCCTGTTCCTGGATGGCGACCAGCTCCCCCTaGGCAAACGCGGCGGCGACC +
Preference number: 4 (lower is better)
Translates to: RDLQLLGPGSCPGACSWMATSSP*ANAAAT
Trigger: GGTCGCCGCCGCGTTTGCGCAGGGGGAGCTGGTCGC...CATCCAGGAACAGGCTCCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394817.7
CDS-3UTR GCA 90 bp CAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTGGCACCCCTCCGTACGTGGGATCCTaGAGGGACAGCCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: QHCQDVLLPEKPTHAGTPPYVGS*RDSLPW
Trigger: CCAGGGCAGGCTGTCCCTGCAGGATCCCACGTACGG...AGGGGTGCCAGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp TGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTGGCTGGCCAGTGTCCTaGCGAGCTGGGGGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: WPSQHCQDVLLPEKPTHAGWPVS*RAGGPD
Trigger: GTCAGGACCCCCAGCTCGGCAGGACACTGGCCAGCC...AGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR TCA 90 bp TGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTCCAGGAGGTGGGCCGTaGTCTCGCACCAGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: WPSQHCQDVLLPEKPTHAPGGGP*SRTSPV
Trigger: AACAGGGCTGGTGCGAGATCACGGCCCACCTCCTGG...AGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR TCA 90 bp CAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTGGCACCCCTAGATGTCCTCCTGCCTaGGAAGCCCACCCACGCTGG +
Preference number: 4 (lower is better)
Translates to: QHCQDVLLPEKPTHAGTPRCPPA*EAHPRW
Trigger: CCAGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCT...AGGGGTGCCAGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp GAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGAGCCTGTTCCTGGATGCGGGCTCCCCCTTCGATaGCCTCCACCTGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: ETCNSWAQVPALEPVPGCGLPLR*PPPGPW
Trigger: CCAAGGTCCAGGTGGAGGCCATCGAAGGGGGAGCCC...GCATCCAGGAACAGGCTCCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp CCAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTGGCCCCAGGTTCCTGCCCTaGAGCCTGTTCCTGGATGCC +
Preference number: 4 (lower is better)
Translates to: PSQHCQDVLLPEKPTHAGPRFLP*SLFLDA
Trigger: GGCATCCAGGAACAGGCTCCAGGGCAGGAACCTGGG...GCCAGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR TCA 90 bp AATGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTGGATGCCCTGGGCTaGGCCCTGCACGTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: NGQASTAKMSSCLRSPPTLDALG*ALHVSR
Trigger: TCTGCTGACGTGCAGGGCTCAGCCCAGGGCATCCAG...CGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp AAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGAGCCTGTTCCGGCGAGCACCTCCGTaGCCTTCTCCTGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: KKQRLATPGPRFLPWSLFRRAPP*PSPAPG
Trigger: CCCTGGTGCAGGAGAAGGGCACGGAGGTGCTCGCCG...GAACAGGCTCCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp AATGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGGGGCTCCCCCTTCGATaGCCTCCACCTGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: NGQASTAKMSSCLRSPPTGLPLR*PPPGPW
Trigger: CCAAGGTCCAGGTGGAGGCCATCGAAGGGGGAGCCC...CGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp CAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTGGCACTGTTCCCACAGGCCTaGCAGGAGGTGTACCTGGCG +
Preference number: 4 (lower is better)
Translates to: QASTAKMSSCLRSPPTLALFPQA*QEVYLA
Trigger: CGCCAGGTACACCTCCTGCCAGGCCTGTGGGAACAG...TGCCAGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp CTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGAGCGGTCCCGGCAGGTaGTCAGGAGGACGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: LLGKKQRLATPGPRFLPWSGPGR*SGGRPV
Trigger: CACTGGGCGTCCTCCTGACCACCTGCCGGGACCGCT...CCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp GAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGAGCCTGTTCCTCCTGGAGCCTGTTCCTaGATGCCCTGGGCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: EAETCNSWAQVPALEPVPPGACS*MPWAEP
Trigger: GGGCTCAGCCCAGGGCATCCAGGAACAGGCTCCAGG...AGGAACAGGCTCCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp TGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTCCCAGGTTCCTGCCCTaGAGCCTGTTCCTGGATGCC +
Preference number: 4 (lower is better)
Translates to: WPSQHCQDVLLPEKPTHAPRFLP*SLFLDA
Trigger: GGCATCCAGGAACAGGCTCCAGGGCAGGAACCTGGG...AGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR TCA 90 bp AAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGAGCCTGTTCGGTCGTAGAGCAGTGTaGCCACGCGCACGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: KKQRLATPGPRFLPWSLFGRRAV*PRARRA
Trigger: TGCTCGCCGTGCGCGTGGTCACACTGCTCTACGACC...GAACAGGCTCCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp TGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTCCGGCCACAGGGCTGTaGCCAGTCTACACAGACACA +
Preference number: 4 (lower is better)
Translates to: WPSQHCQDVLLPEKPTHAPATGL*PVYTDT
Trigger: TGTGTCTGTGTAGACTGGGCACAGCCCTGTGGCCGG...AGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp AAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGAGCCTGTTCCCCTGGGCTGAGCCCTaGACGTCAGCAGAGCCCATC +
Preference number: 4 (lower is better)
Translates to: KKQRLATPGPRFLPWSLFPWAEP*TSAEPI
Trigger: GATGGGCTCTGCTGACGTGCAGGGCTCAGCCCAGGG...GAACAGGCTCCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp AAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGAGCCTGTTCAGGGACAGCCTGCCCTaGCTGAAGGGCCTGCCACTC +
Preference number: 4 (lower is better)
Translates to: KKQRLATPGPRFLPWSLFRDSLP*LKGLPL
Trigger: GAGTGGCAGGCCCTTCAGCCAGGGCAGGCTGTCCCT...GAACAGGCTCCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp TGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTGGACCTTGGGGTTGCTaGAAAAGGCAGCGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: WPSQHCQDVLLPEKPTHAGPWGC*KRQRPA
Trigger: TGCTGGGCGCTGCCTTTTCCAGCAACCCCAAGGTCC...AGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp GAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGAGCCTGTTCCTGGATGCTCTGGGGACATCTCCTaGGTCAGCTCAGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ETCNSWAQVPALEPVPGCSGDIS*VSSASS
Trigger: GGAGGAGGCTGAGCTGACCCAGGAGATGTCCCCAGA...GCATCCAGGAACAGGCTCCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp TGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTTCTGGGGACATCTCCTaGGTCAGCTCAGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: WPSQHCQDVLLPEKPTHASGDIS*VSSASS
Trigger: GGAGGAGGCTGAGCTGACCCAGGAGATGTCCCCAGA...AGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp AATGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGAGGCTGGCCAGCACCTaGTACTCAGCCTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: NGQASTAKMSSCLRSPPTRLAST*YSACRL
Trigger: CAGCCTGCAGGCTGAGTACCAGGTGCTGGCCAGCCT...CGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp CAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTGGCACCCCTAGTCCAGTCCTGGTGTaGGGCCTCATCTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QHCQDVLLPEKPTHAGTPSPVLV*GLISAP
Trigger: AGGAGCTGAGATGAGGCCCCACACCAGGACTGGACT...AGGGGTGCCAGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp TGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTGAGACTTGCAACTCCTaGGCCCAGGTTCCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: WPSQHCQDVLLPEKPTHAETCNS*AQVPAL
Trigger: CAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTC...AGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp AATGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGTTTGCAGTGAGCGGCTaGTCCGTGGCCAGGATGACC +
Preference number: 4 (lower is better)
Translates to: NGQASTAKMSSCLRSPPTFAVSG*SVARMT
Trigger: GGTCATCCTGGCCACGGAGCAGCCGCTCACTGCAAA...CGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp AATGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCCTCCGGCAGCCGAGTaGCAGACACAACTCCCACAA +
Preference number: 4 (lower is better)
Translates to: NGQASTAKMSSCLRSPPTPPAAE*QTQLPQ
Trigger: TTGTGGGAGTTGTGTCTGCCACTCGGCTGCCGGAGG...CGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp CAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTGGCACCCCTGGTGCTGCTCTTCTCTaGGTTGGTCAGGGCAAACTC +
Preference number: 4 (lower is better)
Translates to: QHCQDVLLPEKPTHAGTPGAALL*VGQGKL
Trigger: GAGTTTGCCCTGACCAACCCAGAGAAGAGCAGCACC...AGGGGTGCCAGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp TGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGAAGGGACAGCCTGCCCTaGCTGAAGGGCCTGCCACTC +
Preference number: 4 (lower is better)
Translates to: CLVRSRDLQLLGPGSCPGRDSLP*LKGLPL
Trigger: GAGTGGCAGGCCCTTCAGCCAGGGCAGGCTGTCCCT...TCCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp TGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTAGATTCAGCCGTACGTaGGATCCTGCAGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: WPSQHCQDVLLPEKPTHARFSRT*DPAGTA
Trigger: GGCTGTCCCTGCAGGATCCCACGTACGGCTGAATCT...AGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp CAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTGGCATCGATGGCCTCCACCTaGACCTTGGGGTTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: QASTAKMSSCLRSPPTLASMAST*TLGLLE
Trigger: TTCCAGCAACCCCAAGGTCCAGGTGGAGGCCATCGA...TGCCAGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp GTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTGGCAGCGCCAGGAGGTaGGCCGTGATCTCGCACCAG +
Preference number: 4 (lower is better)
Translates to: VQSCCLVRSRDLQLLGPGGSARR*AVISHQ
Trigger: CTGGTGCGAGATCACGGCCCACCTCCTGGCGCTGCC...ACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp AAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGAGCCTGTTCGAAGCCCACCCACGCTaGCACCCCTCAGCCTCACTA +
Preference number: 4 (lower is better)
Translates to: KKQRLATPGPRFLPWSLFEAHPR*HPSASL
Trigger: TAGTGAGGCTGAGGGGTGCCAGCGTGGGTGGGCTTC...GAACAGGCTCCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp TGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGACCTGGAGCCTGTTCCTaGATGCCCTGGGCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: CLVRSRDLQLLGPGSCPGPGACS*MPWAEP
Trigger: GGGCTCAGCCCAGGGCATCCAGGAACAGGCTCCAGG...TCCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp AGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCAGGGCCTGCCACTCATaGGTCGGGTGGAACACCTCC +
Preference number: 4 (lower is better)
Translates to: SCCLVRSRDLQLLGPGSCRACHS*VGWNTS
Trigger: GGAGGTGTTCCACCCGACGCATGAGTGGCAGGCCCT...GCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp CCCAAGGTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCCGTACGTGGGATCCTaGAGGGACAGCCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PKVQSCCLVRSRDLQLLGPYVGS*RDSLPW
Trigger: CCAGGGCAGGCTGTCCCTGCAGGATCCCACGTACGG...GCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTACCTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp AGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCTCCGTGCCCTTCTCCTaGACCAGGGTCCTCAGGACC +
Preference number: 4 (lower is better)
Translates to: SCCLVRSRDLQLLGPGSCSVPFS*TRVLRT
Trigger: GGTCCTGAGGACCCTGGTGCAGGAGAAGGGCACGGA...GCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp CAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTGGCAACCTGGCGATACTGCTaGAGCTTCTCTGGGGACATC +
Preference number: 4 (lower is better)
Translates to: QASTAKMSSCLRSPPTLATWRYC*SFSGDI
Trigger: GATGTCCCCAGAGAAGCTGCAGCAGTATCGCCAGGT...TGCCAGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp TGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGATTCTCACGGGCATCATaGTCGGGCAGCGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: CLVRSRDLQLLGPGSCPGFSRAS*SGSARR
Trigger: CCTCCTGGCGCTGCCCGAGCATGATGCCCGTGAGAA...TCCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp GGTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCTCACGGGCATCATaGTCGGGCAGCGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GTELLLGKKQRLATPGPRFSRAS*SGSARR
Trigger: CCTCCTGGCGCTGCCCGAGCATGATGCCCGTGAGAA...CCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp AGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCTCGTCCTCACCATCCTaGAGCTCCAGGCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SCCLVRSRDLQLLGPGSCSSSPS*SSRLAS
Trigger: GCTGGCCAGCCTGGAGCTGCAGGATGGTGAGGACGA...GCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp CCCAAGGTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCCCTGGGCTGAGCCCTaGACGTCAGCAGAGCCCATC +
Preference number: 4 (lower is better)
Translates to: PKVQSCCLVRSRDLQLLGPWAEP*TSAEPI
Trigger: GATGGGCTCTGCTGACGTGCAGGGCTCAGCCCAGGG...GCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTACCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp GAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGAGCCTGTTCCTCACTCATGCGTCGGGTaGAACACCTCCAGGACTTCG +
Preference number: 4 (lower is better)
Translates to: EAETCNSWAQVPALEPVPHSCVG*NTSRTS
Trigger: CGAAGTCCTGGAGGTGTTCCACCCGACGCATGAGTG...AGGAACAGGCTCCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp GGTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGGAAGCCCACCCACGCTaGCACCCCTCAGCCTCACTA +
Preference number: 4 (lower is better)
Translates to: GTELLLGKKQRLATPGPREAHPR*HPSASL
Trigger: TAGTGAGGCTGAGGGGTGCCAGCGTGGGTGGGCTTC...CCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp CTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGGAGACTTGCAACTCCTaGGCCCAGGTTCCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: LLGKKQRLATPGPRFLPWETCNS*AQVPAL
Trigger: CAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTC...CCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR TCA 90 bp AGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCAGGAGCCATCCTAGATaGAGGCAGGCTCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: SCCLVRSRDLQLLGPGSCRSHPR*RQALGS
Trigger: GCTCCCCAGAGCCTGCCTTCATCTAGGATGGCTCCT...GCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR TCA 90 bp TGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTTCTCTTTCCCCAGTCTaGAGATTCAGCCGTACGTGG +
Preference number: 4 (lower is better)
Translates to: WPSQHCQDVLLPEKPTHASLSPV*RFSRTW
Trigger: CCACGTACGGCTGAATCTTCAGACTGGGGAAAGAGA...AGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR TCA 90 bp AATGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCGAACATCTTCTCCGTaGCCAGGTCGTAGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: NGQASTAKMSSCLRSPPTRTSSP*PGRRAV
Trigger: CACTGCTCTACGACCTGGTCACGGAGAAGATGTTCG...CGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp AATGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGTGTACCTGGCGATACTaGTGCAGCTTCTCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: NGQASTAKMSSCLRSPPTCTWRY*CSFSGD
Trigger: GTCCCCAGAGAAGCTGCAGCAGTATCGCCAGGTACA...CGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp AGCAGAAAGAGGATGGCCTTCAGGTTTCCATTTAATGGCCAAGCCAGCACTGCCGGCTGGCCAGTGTCCTaGCGAGCTGGGGGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: SRKRMAFRFPFNGQASTAGWPVS*RAGGPD
Trigger: GTCAGGACCCCCAGCTCGGCAGGACACTGGCCAGCC...GGCAGTGCTGGCTTGGCCATTAAATGGAAACCTGAAGGCCATCCTCTTTCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp CTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGCCTCCACCTGGACCTTaGGGTTGCTGGAAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: LLGKKQRLATPGPRFLPWPPPGP*GCWKRQ
Trigger: CTGCCTTTTCCAGCAACCCCAAGGTCCAGGTGGAGG...CCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp AAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGAGCCTGTTCGGCAGGAGGTGTACCTaGCGATACTGCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: KKQRLATPGPRFLPWSLFGRRCT*RYCCSF
Trigger: GAAGCTGCAGCAGTATCGCCAGGTACACCTCCTGCC...GAACAGGCTCCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp CCCAAGGTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCTGTTCCCACAGGCCTaGCAGGAGGTGTACCTGGCG +
Preference number: 4 (lower is better)
Translates to: PKVQSCCLVRSRDLQLLGLFPQA*QEVYLA
Trigger: CGCCAGGTACACCTCCTGCCAGGCCTGTGGGAACAG...GCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTACCTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp AAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGAGCCTGTTCAGTCCAGTCCTGGTGTaGGGCCTCATCTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: KKQRLATPGPRFLPWSLFSPVLV*GLISAP
Trigger: AGGAGCTGAGATGAGGCCCCACACCAGGACTGGACT...GAACAGGCTCCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR TCA 90 bp AGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGAGCCTGTTCCTGGATGCTCTTCTCCTGCCAATaGAACACACCAGGGCTCACA +
Preference number: 4 (lower is better)
Translates to: RDLQLLGPGSCPGACSWMLFSCQ*NTPGLT
Trigger: TGTGAGCCCTGGTGTGTTTCATTGGCAGGAGAAGAG...CATCCAGGAACAGGCTCCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265195.9
CDS-3UTR TCA 90 bp CAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTGGCATTGCCAGTGCACTCTTaGGATCCTGAGATGTGTAGG +
Preference number: 4 (lower is better)
Translates to: QASTAKMSSCLRSPPTLALPVHS*DPEMCR
Trigger: CCTACACATCTCAGGATCTCAAGAGTGCACTGGCAA...TGCCAGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR TCA 90 bp AATGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGTCTCTGCCCCCTCCTTaGATTTTGCCAGTGCACTCT +
Preference number: 4 (lower is better)
Translates to: NGQASTAKMSSCLRSPPTSLPPP*ILPVHS
Trigger: AGAGTGCACTGGCAAAATTCAAGGAGGGGGCAGAGA...CGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR TCA 90 bp GAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGAGCCTGTTCCTGGATGCTGCTGTTCAGCCCATTaGTCACCACTTGAAGACCAC +
Preference number: 4 (lower is better)
Translates to: ETCNSWAQVPALEPVPGCCCSAH*SPLEDH
Trigger: GTGGTCTTCAAGTGGTGATCAATGGGCTGAACAGCA...GCATCCAGGAACAGGCTCCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR TCA 90 bp TGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTTGCTGTTCAGCCCATTaGTCACCACTTGAAGACCAC +
Preference number: 4 (lower is better)
Translates to: WPSQHCQDVLLPEKPTHACCSAH*SPLEDH
Trigger: GTGGTCTTCAAGTGGTGATCAATGGGCTGAACAGCA...AGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR TCA 90 bp GTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTCCTTCTTCTTTGCAGTaGGCGGCTGCTCCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: VQSCCLVRSRDLQLLGPGPSSLQ*AAAPWP
Trigger: TGGCCACGGAGCAGCCGCTCACTGCAAAGAAGAAGG...ACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR TCA 90 bp CTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGCGAACATCTTCTCCGTaGCCAGGTCGTAGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: LLGKKQRLATPGPRFLPWRTSSP*PGRRAV
Trigger: CACTGCTCTACGACCTGGTCACGGAGAAGATGTTCG...CCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR TCA 90 bp CCTTCAGGTTTCCATTTAATGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCAGATGTCCTCCTGCCTaGGAAGCCCACCCACGCTGG +
Preference number: 4 (lower is better)
Translates to: PSGFHLMAKPALPRCPPARCPPA*EAHPRW
Trigger: CCAGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCT...GGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCATTAAATGGAAACCTGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp GAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGAGCCTGTTCCTGGATGCCGCTTTACCTCAGCCTaGCTTGCCTTGTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: ETCNSWAQVPALEPVPGCRFTSA*LALSSF
Trigger: AAAGGAAGACAAGGCAAGGCAGGCTGAGGTAAAGCG...GCATCCAGGAACAGGCTCCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp CCCAAGGTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCTTTGCAGTGAGCGGCTaGTCCGTGGCCAGGATGACC +
Preference number: 4 (lower is better)
Translates to: PKVQSCCLVRSRDLQLLGFAVSG*SVARMT
Trigger: GGTCATCCTGGCCACGGAGCAGCCGCTCACTGCAAA...GCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTACCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp TGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTCAGCAGGGAGCACAGTaGAAACAGGACCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: WPSQHCQDVLLPEKPTHAQQGAQ*KQDLLL
Trigger: AAGAAGAAGGTCCTGTTTGCACTGTGCTCCCTGCTG...AGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp CTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGACCTGGCGATACTGCTaGAGCTTCTCTGGGGACATC +
Preference number: 4 (lower is better)
Translates to: LLGKKQRLATPGPRFLPWTWRYC*SFSGDI
Trigger: GATGTCCCCAGAGAAGCTGCAGCAGTATCGCCAGGT...CCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp CCAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTGGCAAGGTACAGAGCTGCTaGTTGGTAAGAAGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: PSQHCQDVLLPEKPTHAGKVQSC*LVRSRD
Trigger: GTCTCTGCTTCTTACCAAGCAGCAGCTCTGTACCTT...GCCAGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp TGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTTCTTCAGTTCCTCAATaGGGCGGAAGAGCCGCTTTA +
Preference number: 4 (lower is better)
Translates to: WPSQHCQDVLLPEKPTHASSVPQ*GGRAAL
Trigger: TAAAGCGGCTCTTCCGCCCCATTGAGGAACTGAAGA...AGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp AGAGGATGGCCTTCAGGTTTCCATTTAATGGCCAAGCCAGCACTGCCAAGATGTGGCAGCGCCAGGAGGTaGGCCGTGATCTCGCACCAG +
Preference number: 4 (lower is better)
Translates to: RGWPSGFHLMAKPALPRCGSARR*AVISHQ
Trigger: CTGGTGCGAGATCACGGCCCACCTCCTGGCGCTGCC...ACATCTTGGCAGTGCTGGCTTGGCCATTAAATGGAAACCTGAAGGCCATCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp CCTTCAGGTTTCCATTTAATGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCACTCAGCCTGCAGGCTaGCCAGTGTCCTGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: PSGFHLMAKPALPRCPPATQPAG*PVSCRA
Trigger: AGCTCGGCAGGACACTGGCCAGCCTGCAGGCTGAGT...GGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCATTAAATGGAAACCTGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp GTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTGTTCCTGGATGCCCTaGGCTGAGCCCTGCACGTCA +
Preference number: 4 (lower is better)
Translates to: VQSCCLVRSRDLQLLGPGCSWMP*AEPCTS
Trigger: TGACGTGCAGGGCTCAGCCCAGGGCATCCAGGAACA...ACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR TCA 90 bp AGAGGATGGCCTTCAGGTTTCCATTTAATGGCCAAGCCAGCACTGCCAAGATGTGGTCGTAGAGCAGTGTaGCCACGCGCACGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: RGWPSGFHLMAKPALPRCGRRAV*PRARRA
Trigger: TGCTCGCCGTGCGCGTGGTCACACTGCTCTACGACC...ACATCTTGGCAGTGCTGGCTTGGCCATTAAATGGAAACCTGAAGGCCATCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR TCA 90 bp ACTTCCCAAGGTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTCTGGATGCCCTGGGCTaGGCCCTGCACGTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: TSQGTELLLGKKQRLATPLDALG*ALHVSR
Trigger: TCTGCTGACGTGCAGGGCTCAGCCCAGGGCATCCAG...AGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTACCTTGGGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp GCGACTTCCCAAGGTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTAGGGCCTGCCACTCATaGGTCGGGTGGAACACCTCC +
Preference number: 4 (lower is better)
Translates to: ATSQGTELLLGKKQRLATRACHS*VGWNTS
Trigger: GGAGGTGTTCCACCCGACGCATGAGTGGCAGGCCCT...AGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTACCTTGGGAAGTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp AGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCAGGACCTTCTTCTTTaGAGTGAGCGGCTGCTCCGT +
Preference number: 4 (lower is better)
Translates to: SCCLVRSRDLQLLGPGSCQDLLL*SERLLR
Trigger: ACGGAGCAGCCGCTCACTGCAAAGAAGAAGGTCCTG...GCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp GCGACTTCCCAAGGTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTTCGTCCTCACCATCCTaGAGCTCCAGGCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: ATSQGTELLLGKKQRLATSSSPS*SSRLAS
Trigger: GCTGGCCAGCCTGGAGCTGCAGGATGGTGAGGACGA...AGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTACCTTGGGAAGTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp CCTTCAGGTTTCCATTTAATGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCCCTCCGGCAGCCGAGTaGCAGACACAACTCCCACAA +
Preference number: 4 (lower is better)
Translates to: PSGFHLMAKPALPRCPPAPPAAE*QTQLPQ
Trigger: TTGTGGGAGTTGTGTCTGCCACTCGGCTGCCGGAGG...GGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCATTAAATGGAAACCTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp GAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGAGCCTGTTCCTTGCTCTTCTCTGGGTTaGTCAGGGCAAACTCCTTCA +
Preference number: 4 (lower is better)
Translates to: EAETCNSWAQVPALEPVPCSSLG*SGQTPS
Trigger: TGAAGGAGTTTGCCCTGACCAACCCAGAGAAGAGCA...AGGAACAGGCTCCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp CCCAAGGTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCAGATTCAGCCGTACGTaGGATCCTGCAGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: PKVQSCCLVRSRDLQLLGRFSRT*DPAGTA
Trigger: GGCTGTCCCTGCAGGATCCCACGTACGGCTGAATCT...GCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTACCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp AATGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGTCTTCAGTTCCTCAATaGGGCGGAAGAGCCGCTTTA +
Preference number: 4 (lower is better)
Translates to: NGQASTAKMSSCLRSPPTSSVPQ*GGRAAL
Trigger: TAAAGCGGCTCTTCCGCCCCATTGAGGAACTGAAGA...CGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp GCGACTTCCCAAGGTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTACTCAGCCTGCAGGCTaGCCAGTGTCCTGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: ATSQGTELLLGKKQRLATTQPAG*PVSCRA
Trigger: AGCTCGGCAGGACACTGGCCAGCCTGCAGGCTGAGT...AGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTACCTTGGGAAGTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR TCA 90 bp CAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTGGCATGTAGGTGTTGGTGTTaGTATCCAGCCTTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: QASTAKMSSCLRSPPTLACRCWC*YPAFCL
Trigger: AAGGCAAAAGGCTGGATATCAACACCAACACCTACA...TGCCAGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR TCA 90 bp AAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGAGCCTGTTCTTGCCAGTGCACTCTTaGGATCCTGAGATGTGTAGG +
Preference number: 4 (lower is better)
Translates to: KKQRLATPGPRFLPWSLFLPVHS*DPEMCR
Trigger: CCTACACATCTCAGGATCTCAAGAGTGCACTGGCAA...GAACAGGCTCCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR TCA 90 bp AGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCGGCACTCCTGACAGATaGGGAAACAAGCTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: SCCLVRSRDLQLLGPGSCGTPDR*GNKLRA
Trigger: TGCTCTGAGCTTGTTTCCTCATCTGTCAGGAGTGCC...GCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394817.7
CDS-3UTR GCA 90 bp GCGACTTCCCAAGGTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTAGGACGCCCAGTGTCTaGAGCACCTTCTCACGGGCA +
Preference number: 4 (lower is better)
Translates to: ATSQGTELLLGKKQRLATRTPSV*STFSRA
Trigger: TGCCCGTGAGAAGGTGCTGCAGACACTGGGCGTCCT...AGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTACCTTGGGAAGTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp TCCCAAGGTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGTCGATGGCCTCCACCTaGACCTTGGGGTTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: SQGTELLLGKKQRLATPGSMAST*TLGLLE
Trigger: TTCCAGCAACCCCAAGGTCCAGGTGGAGGCCATCGA...CCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTACCTTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp ACTTCCCAAGGTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTAGGCTGGCCAGCACCTaGTACTCAGCCTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: TSQGTELLLGKKQRLATPRLAST*YSACRL
Trigger: CAGCCTGCAGGCTGAGTACCAGGTGCTGGCCAGCCT...AGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTACCTTGGGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR TCA 90 bp AGAGGATGGCCTTCAGGTTTCCATTTAATGGCCAAGCCAGCACTGCCAAGATGTAGGAGCCATCCTAGATaGAGGCAGGCTCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: RGWPSGFHLMAKPALPRCRSHPR*RQALGS
Trigger: GCTCCCCAGAGCCTGCCTTCATCTAGGATGGCTCCT...ACATCTTGGCAGTGCTGGCTTGGCCATTAAATGGAAACCTGAAGGCCATCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR TCA 90 bp AGAGGATGGCCTTCAGGTTTCCATTTAATGGCCAAGCCAGCACTGCCAAGATGTCCTTCTTCTTTGCAGTaGGCGGCTGCTCCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: RGWPSGFHLMAKPALPRCPSSLQ*AAAPWP
Trigger: TGGCCACGGAGCAGCCGCTCACTGCAAAGAAGAAGG...ACATCTTGGCAGTGCTGGCTTGGCCATTAAATGGAAACCTGAAGGCCATCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp GCGACTTCCCAAGGTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTATGACCAGCAGCTTCTaGAGGGCTCCCCCTTCGATG +
Preference number: 4 (lower is better)
Translates to: ATSQGTELLLGKKQRLATMTSSF*RAPPSM
Trigger: CATCGAAGGGGGAGCCCTGCAGAAGCTGCTGGTCAT...AGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTACCTTGGGAAGTCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp AGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCAGCAGGGAGCACAGTaGAAACAGGACCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SCCLVRSRDLQLLGPGSCQQGAQ*KQDLLL
Trigger: AAGAAGAAGGTCCTGTTTGCACTGTGCTCCCTGCTG...GCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp CCTTCAGGTTTCCATTTAATGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGTACCTGGCGATACTaGTGCAGCTTCTCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: PSGFHLMAKPALPRCPPACTWRY*CSFSGD
Trigger: GTCCCCAGAGAAGCTGCAGCAGTATCGCCAGGTACA...GGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCATTAAATGGAAACCTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp ACTTCCCAAGGTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTAGGACGCCCAGTGTCTaGAGCACCTTCTCACGGGCA +
Preference number: 4 (lower is better)
Translates to: TSQGTELLLGKKQRLATPRTPSV*STFSRA
Trigger: TGCCCGTGAGAAGGTGCTGCAGACACTGGGCGTCCT...AGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTACCTTGGGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp GCGACTTCCCAAGGTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCACTCATGCGTCGGGTaGAACACCTCCAGGACTTCG +
Preference number: 4 (lower is better)
Translates to: ATSQGTELLLGKKQRLATHSCVG*NTSRTS
Trigger: CGAAGTCCTGGAGGTGTTCCACCCGACGCATGAGTG...AGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTACCTTGGGAAGTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp AGAGGATGGCCTTCAGGTTTCCATTTAATGGCCAAGCCAGCACTGCCAAGATGTGGACCTTGGGGTTGCTaGAAAAGGCAGCGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: RGWPSGFHLMAKPALPRCGPWGC*KRQRPA
Trigger: TGCTGGGCGCTGCCTTTTCCAGCAACCCCAAGGTCC...ACATCTTGGCAGTGCTGGCTTGGCCATTAAATGGAAACCTGAAGGCCATCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp AGCAGAAAGAGGATGGCCTTCAGGTTTCCATTTAATGGCCAAGCCAGCACTGCCCCTCCACCTGGACCTTaGGGTTGCTGGAAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: SRKRMAFRFPFNGQASTAPPPGP*GCWKRQ
Trigger: CTGCCTTTTCCAGCAACCCCAAGGTCCAGGTGGAGG...GGCAGTGCTGGCTTGGCCATTAAATGGAAACCTGAAGGCCATCCTCTTTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp GCGACTTCCCAAGGTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTGGCAGGAGGTGTACCTaGCGATACTGCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: ATSQGTELLLGKKQRLATGRRCT*RYCCSF
Trigger: GAAGCTGCAGCAGTATCGCCAGGTACACCTCCTGCC...AGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTACCTTGGGAAGTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp TCTCCTTTAATGGCACTCCTGACAGATGAGGAAACAAGCTCAGAGCAATTAAGCAGCGGTCCCGGCAGGTaGTCAGGAGGACGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: SPLMALLTDEETSSEQLSSGPGR*SGGRPV
Trigger: CACTGGGCGTCCTCCTGACCACCTGCCGGGACCGCT...GCTTAATTGCTCTGAGCTTGTTTCCTCATCTGTCAGGAGTGCCATTAAAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394817.7
CDS-3UTR GCA 90 bp TGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGACCCCTCCTTGAATTTTaGCAGTGCACTCTTGAGATC +
Preference number: 4 (lower is better)
Translates to: CLVRSRDLQLLGPGSCPGPLLEF*QCTLEI
Trigger: GATCTCAAGAGTGCACTGGCAAAATTCAAGGAGGGG...TCCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp ACTTCCCAAGGTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTATGACCAGCAGCTTCTaGAGGGCTCCCCCTTCGATG +
Preference number: 4 (lower is better)
Translates to: TSQGTELLLGKKQRLATPMTSSF*RAPPSM
Trigger: CATCGAAGGGGGAGCCCTGCAGAAGCTGCTGGTCAT...AGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTACCTTGGGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR TCA 90 bp AGCAGAAAGAGGATGGCCTTCAGGTTTCCATTTAATGGCCAAGCCAGCACTGCCTCTCTTTCCCCAGTCTaGAGATTCAGCCGTACGTGG +
Preference number: 4 (lower is better)
Translates to: SRKRMAFRFPFNGQASTASLSPV*RFSRTW
Trigger: CCACGTACGGCTGAATCTTCAGACTGGGGAAAGAGA...GGCAGTGCTGGCTTGGCCATTAAATGGAAACCTGAAGGCCATCCTCTTTCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR TCA 90 bp AGCAGAAAGAGGATGGCCTTCAGGTTTCCATTTAATGGCCAAGCCAGCACTGCCTCTCTGCCCCCTCCTTaGATTTTGCCAGTGCACTCT +
Preference number: 4 (lower is better)
Translates to: SRKRMAFRFPFNGQASTASLPPP*ILPVHS
Trigger: AGAGTGCACTGGCAAAATTCAAGGAGGGGGCAGAGA...GGCAGTGCTGGCTTGGCCATTAAATGGAAACCTGAAGGCCATCCTCTTTCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR TCA 90 bp CCCAAGGTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCCATTGATCACCACTTaGAGACCACCAAAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: PKVQSCCLVRSRDLQLLGPLITT*RPPKES
Trigger: GCTTTCCTTTGGTGGTCTTCAAGTGGTGATCAATGG...GCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTACCTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp AGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCAGCCGTACCATGATCTaGATGTCAGTCTCAATGACA +
Preference number: 4 (lower is better)
Translates to: SCCLVRSRDLQLLGPGSCSRTMI*MSVSMT
Trigger: TGTCATTGAGACTGACATGCAGATCATGGTACGGCT...GCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp AGAGGATGGCCTTCAGGTTTCCATTTAATGGCCAAGCCAGCACTGCCAAGATGTCAGGACCTTCTTCTTTaGAGTGAGCGGCTGCTCCGT +
Preference number: 4 (lower is better)
Translates to: RGWPSGFHLMAKPALPRCQDLLL*SERLLR
Trigger: ACGGAGCAGCCGCTCACTGCAAAGAAGAAGGTCCTG...ACATCTTGGCAGTGCTGGCTTGGCCATTAAATGGAAACCTGAAGGCCATCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CCA 90 bp CCTTCAGGTTTCCATTTAATGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGCTCTTCTCTGGGTTaGTCAGGGCAAACTCCTTCA +
Preference number: 4 (lower is better)
Translates to: PSGFHLMAKPALPRCPPACSSLG*SGQTPS
Trigger: TGAAGGAGTTTGCCCTGACCAACCCAGAGAAGAGCA...GGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCATTAAATGGAAACCTGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR TCA 90 bp TGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGAGCATGTCAGTCTCAATaGCAACATTCAGCTCATCAA +
Preference number: 4 (lower is better)
Translates to: CLVRSRDLQLLGPGSCPGACQSQ*QHSAHQ
Trigger: TTGATGAGCTGAATGTTGTCATTGAGACTGACATGC...TCCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp GTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTCTCATATTGGAGTTTTaGCTCTCTTTCCCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: VQSCCLVRSRDLQLLGPGLILEF*LSFPSL
Trigger: CAGACTGGGGAAAGAGAGGCAAAACTCCAATATGAG...ACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp CCTTCAGGTTTCCATTTAATGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCCCCCTCCTTGAATTTTaGCAGTGCACTCTTGAGATC +
Preference number: 4 (lower is better)
Translates to: PSGFHLMAKPALPRCPPAPLLEF*QCTLEI
Trigger: GATCTCAAGAGTGCACTGGCAAAATTCAAGGAGGGG...GGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCATTAAATGGAAACCTGAAGG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR TCA 90 bp GCGACTTCCCAAGGTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCCATTGATCACCACTTaGAGACCACCAAAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: ATSQGTELLLGKKQRLATPLITT*RPPKES
Trigger: GCTTTCCTTTGGTGGTCTTCAAGTGGTGATCAATGG...AGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTACCTTGGGAAGTCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp AGCAGAAAGAGGATGGCCTTCAGGTTTCCATTTAATGGCCAAGCCAGCACTGCCAAGGTACAGAGCTGCTaGTTGGTAAGAAGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: SRKRMAFRFPFNGQASTAKVQSC*LVRSRD
Trigger: GTCTCTGCTTCTTACCAAGCAGCAGCTCTGTACCTT...GGCAGTGCTGGCTTGGCCATTAAATGGAAACCTGAAGGCCATCCTCTTTCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR TCA 90 bp AGCAGAAAGAGGATGGCCTTCAGGTTTCCATTTAATGGCCAAGCCAGCACTGCCTGTAGGTGTTGGTGTTaGTATCCAGCCTTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: SRKRMAFRFPFNGQASTACRCWC*YPAFCL
Trigger: AAGGCAAAAGGCTGGATATCAACACCAACACCTACA...GGCAGTGCTGGCTTGGCCATTAAATGGAAACCTGAAGGCCATCCTCTTTCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR TCA 90 bp TCCCAAGGTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGGCATGTCAGTCTCAATaGCAACATTCAGCTCATCAA +
Preference number: 4 (lower is better)
Translates to: SQGTELLLGKKQRLATPGACQSQ*QHSAHQ
Trigger: TTGATGAGCTGAATGTTGTCATTGAGACTGACATGC...CCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTACCTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp CCTTCAGGTTTCCATTTAATGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCCTTGAATTTTGCCAGTaGACTCTTGAGATCCTGAGA +
Preference number: 4 (lower is better)
Translates to: PSGFHLMAKPALPRCPPALEFCQ*TLEILR
Trigger: TCTCAGGATCTCAAGAGTGCACTGGCAAAATTCAAG...GGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCATTAAATGGAAACCTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp GCGACTTCCCAAGGTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTAGCCGTACCATGATCTaGATGTCAGTCTCAATGACA +
Preference number: 4 (lower is better)
Translates to: ATSQGTELLLGKKQRLATSRTMI*MSVSMT
Trigger: TGTCATTGAGACTGACATGCAGATCATGGTACGGCT...AGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTACCTTGGGAAGTCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp AGCAGAAAGAGGATGGCCTTCAGGTTTCCATTTAATGGCCAAGCCAGCACTGCCCTTGAATTTTGCCAGTaGACTCTTGAGATCCTGAGA +
Preference number: 4 (lower is better)
Translates to: SRKRMAFRFPFNGQASTALEFCQ*TLEILR
Trigger: TCTCAGGATCTCAAGAGTGCACTGGCAAAATTCAAG...GGCAGTGCTGGCTTGGCCATTAAATGGAAACCTGAAGGCCATCCTCTTTCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR GCA 90 bp TCTCCTTTAATGGCACTCCTGACAGATGAGGAAACAAGCTCAGAGCAATTAAGCCGCTTTACCTCAGCCTaGCTTGCCTTGTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: SPLMALLTDEETSSEQLSRFTSA*LALSSF
Trigger: AAAGGAAGACAAGGCAAGGCAGGCTGAGGTAAAGCG...GCTTAATTGCTCTGAGCTTGTTTCCTCATCTGTCAGGAGTGCCATTAAAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394817.7
CDS CCA 90 bp TGCAGCACCTTCTCACGGGCATCATGCTCGGGCAGCGCCAGGAGGTaGGCCGTGATCTCGCACCAGCCCTGTTCCCACAGGCCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: CSTFSRASCSGSARR*AVISHQPCSHRPGR
Trigger: CCTGCCAGGCCTGTGGGAACAGGGCTGGTGCGAGATCACGGCCCACCTCCTGGCGCTGCCCGAGCATGATGCCCGTGAGAAGGTGCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265195.9
ENST00000394817.7
ENST00000509534.5
ENST00000515008.1
CDS TCA 90 bp CCTTCTCACGGGCATCATGCTCGGGCAGCGCCAGGAGGTGGGCCGTaGTCTCGCACCAGCCCTGTTCCCACAGGCCTGGCAGGAGGTGTA +
Preference number: 5 (lower is better)
Translates to: PSHGHHARAAPGGGP*SRTSPVPTGLAGGV
Trigger: TACACCTCCTGCCAGGCCTGTGGGAACAGGGCTGGTGCGAGATCACGGCCCACCTCCTGGCGCTGCCCGAGCATGATGCCCGTGAGAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265195.9
ENST00000394817.7
ENST00000509534.5
ENST00000515008.1
CDS CCA 90 bp ATGACCAGCAGCTTCTGCAGGGCTCCCCCTTCGATGGCCTCCACCTaGACCTTGGGGTTGAGGAGAGGGCCCGACACACAGCAGGCGTGC +
Preference number: 5 (lower is better)
Translates to: MTSSFCRAPPSMAST*TLGLRRGPDTQQAC
Trigger: GCACGCCTGCTGTGTGTCGGGCCCTCTCCTCAACCCCAAGGTCCAGGTGGAGGCCATCGAAGGGGGAGCCCTGCAGAAGCTGCTGGTCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515008.1
CDS GCA 90 bp TTTGCAGTGAGCGGCTGCTCCGTGGCCAGGATGACCAGCAGCTTCTaGAGGGCTCCCCCTTCGATGGCCTCCACCTGGACCTTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: FAVSGCSVARMTSSF*RAPPSMASTWTLGL
Trigger: CAACCCCAAGGTCCAGGTGGAGGCCATCGAAGGGGGAGCCCTGCAGAAGCTGCTGGTCATCCTGGCCACGGAGCAGCCGCTCACTGCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265195.9
ENST00000394817.7
ENST00000503732.1
ENST00000509534.5
ENST00000515008.1
CDS CCA 90 bp CAGGAGGTGGGCCGTGATCTCGCACCAGCCCTGTTCCCACAGGCCTaGCAGGAGGTGTACCTGGCGATACTGCTGCAGCTTCTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: QEVGRDLAPALFPQA*QEVYLAILLQLLWG
Trigger: TCCCCAGAGAAGCTGCAGCAGTATCGCCAGGTACACCTCCTGCCAGGCCTGTGGGAACAGGGCTGGTGCGAGATCACGGCCCACCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265195.9
ENST00000394817.7
ENST00000509534.5
ENST00000515008.1
CDS GCA 90 bp CAGCCCTGTTCCCACAGGCCTGGCAGGAGGTGTACCTGGCGATACTaGTGCAGCTTCTCTGGGGACATCTCCTGGGTCAGCTCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: QPCSHRPGRRCTWRY*CSFSGDISWVSSAS
Trigger: GGAGGCTGAGCTGACCCAGGAGATGTCCCCAGAGAAGCTGCAGCAGTATCGCCAGGTACACCTCCTGCCAGGCCTGTGGGAACAGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265195.9
ENST00000394817.7
ENST00000509534.5
ENST00000515008.1
CDS CCA 90 bp ATCTCGCACCAGCCCTGTTCCCACAGGCCTGGCAGGAGGTGTACCTaGCGATACTGCTGCAGCTTCTCTGGGGACATCTCCTGGGTCAGC +
Preference number: 5 (lower is better)
Translates to: ISHQPCSHRPGRRCT*RYCCSFSGDISWVS
Trigger: GCTGACCCAGGAGATGTCCCCAGAGAAGCTGCAGCAGTATCGCCAGGTACACCTCCTGCCAGGCCTGTGGGAACAGGGCTGGTGCGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265195.9
ENST00000394817.7
ENST00000509534.5
ENST00000515008.1
CDS-3UTR CAA 90 bp AGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGAGCCTGTTCCTGGATGACCTGGACCTTGGGGTaGCTGGAAAAGGCAGCGCCC +
Preference number: 5 (lower is better)
Translates to: RDLQLLGPGSCPGACSWMTWTLG*LEKAAP
Trigger: GGGCGCTGCCTTTTCCAGCAACCCCAAGGTCCAGGT...CATCCAGGAACAGGCTCCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CAA 90 bp CAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTGGCAGCCTCCACCTGGACCTaGGGGTTGCTGGAAAAGGCA +
Preference number: 5 (lower is better)
Translates to: QASTAKMSSCLRSPPTLAASTWT*GLLEKA
Trigger: TGCCTTTTCCAGCAACCCCAAGGTCCAGGTGGAGGC...TGCCAGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CAA 90 bp AATGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGGCCTCCACCTGGACCTaGGGGTTGCTGGAAAAGGCA +
Preference number: 5 (lower is better)
Translates to: NGQASTAKMSSCLRSPPTASTWT*GLLEKA
Trigger: TGCCTTTTCCAGCAACCCCAAGGTCCAGGTGGAGGC...CGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CAA 90 bp TGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTTCCTTCAGCAAGCTGTaGACAGAGCCCAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: WPSQHCQDVLLPEKPTHASFSKL*TEPSSS
Trigger: GGAGCTGCTGGGCTCTGTCAACAGCTTGCTGAAGGA...AGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS CCA 90 bp AGGTGTACCTGGCGATACTGCTGCAGCTTCTCTGGGGACATCTCCTaGGTCAGCTCAGCCTCCTCCTCGGCGAACATCTTCTCCGTGACC +
Preference number: 5 (lower is better)
Translates to: RCTWRYCCSFSGDIS*VSSASSSANIFSVT
Trigger: GGTCACGGAGAAGATGTTCGCCGAGGAGGAGGCTGAGCTGACCCAGGAGATGTCCCCAGAGAAGCTGCAGCAGTATCGCCAGGTACACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265195.9
ENST00000394817.7
ENST00000509534.5
ENST00000515008.1
CDS CCA 90 bp CCAAGCAGCATGCCCAGAGGAGCCATCCTAGATGAAGGCAGGCTCTaGGGAGCCATAGTCAGGGACGTGCCAGAGTTCATGCAGCCACAG +
Preference number: 5 (lower is better)
Translates to: PSSMPRGAILDEGRL*GAIVRDVPEFMQPQ
Trigger: CTGTGGCTGCATGAACTCTGGCACGTCCCTGACTATGGCTCCCCAGAGCCTGCCTTCATCTAGGATGGCTCCTCTGGGCATGCTGCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509534.5
CDS-3UTR CAA 90 bp CAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTGGCACTGCTCTTCTCTGGGTaGGTCAGGGCAAACTCCTTC +
Preference number: 5 (lower is better)
Translates to: QASTAKMSSCLRSPPTLALLFSG*VRANSF
Trigger: GAAGGAGTTTGCCCTGACCAACCCAGAGAAGAGCAG...TGCCAGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CAA 90 bp CAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTGGCAGTAAGAAGCAGAGACTaGCAACTCCTGGGCCCAGGT +
Preference number: 5 (lower is better)
Translates to: QASTAKMSSCLRSPPTLAVRSRD*QLLGPG
Trigger: ACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTTAC...TGCCAGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CAA 90 bp TGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTTCAGCCTGCCTTGCCTaGTCTTCCTTTGAACTCTCC +
Preference number: 5 (lower is better)
Translates to: WPSQHCQDVLLPEKPTHASACLA*SSFELS
Trigger: GGAGAGTTCAAAGGAAGACAAGGCAAGGCAGGCTGA...AGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CAA 90 bp AATGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGGTAAGAAGCAGAGACTaGCAACTCCTGGGCCCAGGT +
Preference number: 5 (lower is better)
Translates to: NGQASTAKMSSCLRSPPTVRSRD*QLLGPG
Trigger: ACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTTAC...CGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS CCA 90 bp GGGTTGAGGAGAGGGCCCGACACACAGCAGGCGTGCCCCCAAAGCTaGCTGAATGGAATGAAGATAGCTCCCCACTTCTATTCTGACCAG +
Preference number: 5 (lower is better)
Translates to: GLRRGPDTQQACPQS*LNGMKIAPHFYSDQ
Trigger: CTGGTCAGAATAGAAGTGGGGAGCTATCTTCATTCCATTCAGCCAGCTTTGGGGGCACGCCTGCTGTGTGTCGGGCCCTCTCCTCAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515008.1
CDS-3UTR CAA 90 bp CCAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTGGCCCTCATATTGGAGTTTaGCCTCTCTTTCCCCAGTCT +
Preference number: 5 (lower is better)
Translates to: PSQHCQDVLLPEKPTHAGPHIGV*PLFPQS
Trigger: AGACTGGGGAAAGAGAGGCAAAACTCCAATATGAGG...GCCAGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CAA 90 bp CAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTGGCACCCCTCTGGAGCTGGAACTATaGAACTTGTTGATCAGCCGT +
Preference number: 5 (lower is better)
Translates to: QHCQDVLLPEKPTHAGTPLELEL*NLLISR
Trigger: ACGGCTGATCAACAAGTTCAATAGTTCCAGCTCCAG...AGGGGTGCCAGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CAA 90 bp CAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTGGCAGTACAGAGCTGCTGCTaGGTAAGAAGCAGAGACTTG +
Preference number: 5 (lower is better)
Translates to: QASTAKMSSCLRSPPTLAVQSCC*VRSRDL
Trigger: CAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTAC...TGCCAGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS CCA 90 bp CCAAGCAGCATGCCCAGAGGAGCCATCCTAGATGAAGGCAGGCTCTaGGGAGCCATAGTCAGGGACAATTCTGAAGGCCAGAAGTCCAAG +
Preference number: 5 (lower is better)
Translates to: PSSMPRGAILDEGRL*GAIVRDNSEGQKSK
Trigger: CTTGGACTTCTGGCCTTCAGAATTGTCCCTGACTATGGCTCCCCAGAGCCTGCCTTCATCTAGGATGGCTCCTCTGGGCATGCTGCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505353.1
CDS-3UTR CAA 90 bp AAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGAGCCTGTTCTCAGCCTGCCTTGCCTaGTCTTCCTTTGAACTCTCC +
Preference number: 5 (lower is better)
Translates to: KKQRLATPGPRFLPWSLFSACLA*SSFELS
Trigger: GGAGAGTTCAAAGGAAGACAAGGCAAGGCAGGCTGA...GAACAGGCTCCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CAA 90 bp TGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTCCCATTGATCACCACTaGAAGACCACCAAAGGAAAG +
Preference number: 5 (lower is better)
Translates to: WPSQHCQDVLLPEKPTHAPIDHH*KTTKGK
Trigger: CTTTCCTTTGGTGGTCTTCAAGTGGTGATCAATGGG...AGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CAA 90 bp AATGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGGTACAGAGCTGCTGCTaGGTAAGAAGCAGAGACTTG +
Preference number: 5 (lower is better)
Translates to: NGQASTAKMSSCLRSPPTVQSCC*VRSRDL
Trigger: CAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTAC...CGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS CCA 90 bp GGCACTAGGGAGGCCGGTCCTGCAGAGGTCAGCAGTAGGAGTGACTaGCTTAATCTATTCGAAAACCTCCTGGAAAGATCCCGAAGACCG +
Preference number: 5 (lower is better)
Translates to: GTREAGPAEVSSRSD*LNLFENLLERSRRP
Trigger: CGGTCTTCGGGATCTTTCCAGGAGGTTTTCGAATAGATTAAGCCAGTCACTCCTACTGCTGACCTCTGCAGGACCGGCCTCCCTAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508744.1
CDS-3UTR CAA 90 bp TGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGAATCTCTGCCCCCTCCTaGAATTTTGCCAGTGCACTC +
Preference number: 5 (lower is better)
Translates to: CLVRSRDLQLLGPGSCPGISAPS*NFASAL
Trigger: GAGTGCACTGGCAAAATTCAAGGAGGGGGCAGAGAT...TCCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CAA 90 bp AGAGGATGGCCTTCAGGTTTCCATTTAATGGCCAAGCCAGCACTGCCAAGATGTACCTGGACCTTGGGGTaGCTGGAAAAGGCAGCGCCC +
Preference number: 5 (lower is better)
Translates to: RGWPSGFHLMAKPALPRCTWTLG*LEKAAP
Trigger: GGGCGCTGCCTTTTCCAGCAACCCCAAGGTCCAGGT...ACATCTTGGCAGTGCTGGCTTGGCCATTAAATGGAAACCTGAAGGCCATCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CAA 90 bp CCTTCAGGTTTCCATTTAATGGCCAAGCCAGCACTGCCAAGATGTCCTCCTGCCTCCTTCAGCAAGCTGTaGACAGAGCCCAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PSGFHLMAKPALPRCPPASFSKL*TEPSSS
Trigger: GGAGCTGCTGGGCTCTGTCAACAGCTTGCTGAAGGA...GGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCATTAAATGGAAACCTGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS TCA 90 bp CGGAACTTGTCCTCATATTGGAGTTTTGCCTCTCTTTCCCCAGTCTaGAGATTCAGCCGTACGTGGGATCCTGCAGGGACAGCCTGCCCT +
Preference number: 5 (lower is better)
Translates to: RNLSSYWSFASLSPV*RFSRTWDPAGTACP
Trigger: AGGGCAGGCTGTCCCTGCAGGATCCCACGTACGGCTGAATCTTCAGACTGGGGAAAGAGAGGCAAAACTCCAATATGAGGACAAGTTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265195.9
ENST00000394817.7
ENST00000505830.5
ENST00000507002.5
ENST00000508639.5
ENST00000509534.5
ENST00000513453.5
CDS TCA 90 bp ACGCAGCATACTCCTTCACGAGGGGCTCTGTGCTGTTCAGCCCATTaGTCACCACTTGAAGACCACCAAAGGAAAGCAGGTCCTGCGCAT +
Preference number: 5 (lower is better)
Translates to: TQHTPSRGALCCSAH*SPLEDHQRKAGPAH
Trigger: ATGCGCAGGACCTGCTTTCCTTTGGTGGTCTTCAAGTGGTGATCAATGGGCTGAACAGCACAGAGCCCCTCGTGAAGGAGTATGCTGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265195.9
ENST00000394817.7
ENST00000503732.1
ENST00000505945.1
ENST00000509534.5
CDS TCA 90 bp CGGAACTTGTCCTCATATTGGAGTTTTGCCTCTCTTTCCCCAGTCTaGAGATTCAGCCGTACGTGGGATCCTGCAGGGACAGCCTGCCTG +
Preference number: 5 (lower is better)
Translates to: RNLSSYWSFASLSPV*RFSRTWDPAGTACL
Trigger: CAGGCAGGCTGTCCCTGCAGGATCCCACGTACGGCTGAATCTTCAGACTGGGGAAAGAGAGGCAAAACTCCAATATGAGGACAAGTTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503732.1
CDS-3UTR CAA 90 bp AAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGAGCCTGTTCCCTCATATTGGAGTTTaGCCTCTCTTTCCCCAGTCT +
Preference number: 5 (lower is better)
Translates to: KKQRLATPGPRFLPWSLFPHIGV*PLFPQS
Trigger: AGACTGGGGAAAGAGAGGCAAAACTCCAATATGAGG...GAACAGGCTCCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CAA 90 bp GTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTATCTCTGCCCCCTCCTaGAATTTTGCCAGTGCACTC +
Preference number: 5 (lower is better)
Translates to: VQSCCLVRSRDLQLLGPGISAPS*NFASAL
Trigger: GAGTGCACTGGCAAAATTCAAGGAGGGGGCAGAGAT...ACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CAA 90 bp CAAGCCAGCACTGCCAAGATGTCCTCCTGCCTGAGAAGCCCACCCACGCTGGCAGAACTATTGAACTTGTaGATCAGCCGTACCATGATC +
Preference number: 5 (lower is better)
Translates to: QASTAKMSSCLRSPPTLAELLNL*ISRTMI
Trigger: GATCATGGTACGGCTGATCAACAAGTTCAATAGTTC...TGCCAGCGTGGGTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CAA 90 bp GAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGAGCCTGTTCCTCTGGAACTATTGAACTaGTTGATCAGCCGTACCATG +
Preference number: 5 (lower is better)
Translates to: EAETCNSWAQVPALEPVPLELLN*LISRTM
Trigger: CATGGTACGGCTGATCAACAAGTTCAATAGTTCCAG...AGGAACAGGCTCCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CAA 90 bp CTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGCTGGAGCTGGAACTATaGAACTTGTTGATCAGCCGT +
Preference number: 5 (lower is better)
Translates to: LLGKKQRLATPGPRFLPWLELEL*NLLISR
Trigger: ACGGCTGATCAACAAGTTCAATAGTTCCAGCTCCAG...CCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS TCA 90 bp TCCTTCACGAGGGGCTCTGTGCTGTTCAGCCCATTGATCACCACTTaGAGACCACCAAAGGAAAGCAGGTCCTGCGCATTGTCCATCTTG +
Preference number: 5 (lower is better)
Translates to: SFTRGSVLFSPLITT*RPPKESRSCALSIL
Trigger: CAAGATGGACAATGCGCAGGACCTGCTTTCCTTTGGTGGTCTTCAAGTGGTGATCAATGGGCTGAACAGCACAGAGCCCCTCGTGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505945.1
CDS-3UTR CAA 90 bp AGCAGAAAGAGGATGGCCTTCAGGTTTCCATTTAATGGCCAAGCCAGCACTGCCCTGCTCTTCTCTGGGTaGGTCAGGGCAAACTCCTTC +
Preference number: 5 (lower is better)
Translates to: SRKRMAFRFPFNGQASTALLFSG*VRANSF
Trigger: GAAGGAGTTTGCCCTGACCAACCCAGAGAAGAGCAG...GGCAGTGCTGGCTTGGCCATTAAATGGAAACCTGAAGGCCATCCTCTTTCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CAA 90 bp AGAGACTTGCAACTCCTGGGCCCAGGTTCCTGCCCTGGAGCCTGTTCCTGGATGGAACTATTGAACTTGTaGATCAGCCGTACCATGATC +
Preference number: 5 (lower is better)
Translates to: RDLQLLGPGSCPGACSWMELLNL*ISRTMI
Trigger: GATCATGGTACGGCTGATCAACAAGTTCAATAGTTC...CATCCAGGAACAGGCTCCAGGGCAGGAACCTGGGCCCAGGAGTTGCAAGTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CAA 90 bp GGTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGCCCAGGCCCATTGATCACCACTaGAAGACCACCAAAGGAAAG +
Preference number: 5 (lower is better)
Translates to: GTELLLGKKQRLATPGPRPIDHH*KTTKGK
Trigger: CTTTCCTTTGGTGGTCTTCAAGTGGTGATCAATGGG...CCTGGGCCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS GCA 90 bp AGAGCAGTAGAGTCAGAATTCAAAGCCAGTTTGGCCCCAAAGCCATaGTCTTTCCATAGCCGTGCTGTCTCTCGAGGGGTCTGTGAAATC +
Preference number: 5 (lower is better)
Translates to: RAVESEFKASLAPKP*SFHSRAVSRGVCEI
Trigger: GATTTCACAGACCCCTCGAGAGACAGCACGGCTATGGAAAGAGCATGGCTTTGGGGCCAAACTGGCTTTGAATTCTGACTCTACTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509534.5
CDS GCA 90 bp AGAAGTCCAAGATCAAGGTTCCAGCTGAAGACTCTCATCTTAGCTTaGAGATGGCTGCCCTCTTGCCATGTCTTCACATGGCCTTTCCTC +
Preference number: 5 (lower is better)
Translates to: RSPRSRFQLKTLILA*RWLPSCHVFTWPFL
Trigger: GAGGAAAGGCCATGTGAAGACATGGCAAGAGGGCAGCCATCTGCAAGCTAAGATGAGAGTCTTCAGCTGGAACCTTGATCTTGGACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505353.1
CDS-3UTR CAA 90 bp AGAGGATGGCCTTCAGGTTTCCATTTAATGGCCAAGCCAGCACTGCCAAGATGTTTACCTCAGCCTGCCTaGCCTTGTCTTCCTTTGAAC +
Preference number: 5 (lower is better)
Translates to: RGWPSGFHLMAKPALPRCLPQPA*PCLPLN
Trigger: GTTCAAAGGAAGACAAGGCAAGGCAGGCTGAGGTAA...ACATCTTGGCAGTGCTGGCTTGGCCATTAAATGGAAACCTGAAGGCCATCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS-3UTR CAA 90 bp ACTTCCCAAGGTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTTTACCTCAGCCTGCCTaGCCTTGTCTTCCTTTGAAC +
Preference number: 5 (lower is better)
Translates to: TSQGTELLLGKKQRLATPLPQPA*PCLPLN
Trigger: GTTCAAAGGAAGACAAGGCAAGGCAGGCTGAGGTAA...AGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTACCTTGGGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS GCA 90 bp TTCCAGCTGAAGACTCTCATCTTAGCTTGCAGATGGCTGCCCTCTTaGCATGTCTTCACATGGCCTTTCCTCAGTATACACACACACGTA +
Preference number: 5 (lower is better)
Translates to: FQLKTLILACRWLPS*HVFTWPFLSIHTHV
Trigger: TACGTGTGTGTGTATACTGAGGAAAGGCCATGTGAAGACATGGCAAGAGGGCAGCCATCTGCAAGCTAAGATGAGAGTCTTCAGCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505353.1
CDS-3UTR CAA 90 bp TCCCAAGGTACAGAGCTGCTGCTTGGTAAGAAGCAGAGACTTGCAACTCCTGGGGAACTTGTCCTCATATaGGAGTTTTGCCTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: SQGTELLLGKKQRLATPGELVLI*EFCLSF
Trigger: GAAAGAGAGGCAAAACTCCAATATGAGGACAAGTTC...CCCAGGAGTTGCAAGTCTCTGCTTCTTACCAAGCAGCAGCTCTGTACCTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000394817.7
CDS CCA 90 bp CGGCAGCAACAATCAAATGCCAAAATACAATCTGGGCTCAGCTCTTaGCCATTCCCTCTCCGAAGAATGTGTCTCATTGAAGAAAGGGCA +
Preference number: 5 (lower is better)
Translates to: RQQQSNAKIQSGLSS*PFPLRRMCLIEERA
Trigger: TGCCCTTTCTTCAATGAGACACATTCTTCGGAGAGGGAATGGCCAAGAGCTGAGCCCAGATTGTATTTTGGCATTTGATTGTTGCTGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504666.5
CDS TCA 90 bp TGGGCTCAGCTCTTGGCCATTCCCTCTCCGAAGAATGTGTCTCATTaGAGAAAGGGCATTATAGGCTTTATCTTTCTTCCAAAGACGACG +
Preference number: 5 (lower is better)
Translates to: WAQLLAIPSPKNVSH*RKGIIGFIFLPKTT
Trigger: CGTCGTCTTTGGAAGAAAGATAAAGCCTATAATGCCCTTTCTTCAATGAGACACATTCTTCGGAGAGGGAATGGCCAAGAGCTGAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504666.5
CDS TCA 90 bp TCAGGGACCTTTCAGTTTCACTTAATTAGCCTCTTCTCCTGCCAATaGAACACACCAGGGCTCACAGTTGGCCTCAGTAGAGAAGTAATA +
Preference number: 5 (lower is better)
Translates to: SGTFQFHLISLFSCQ*NTPGLTVGLSREVI
Trigger: TATTACTTCTCTACTGAGGCCAACTGTGAGCCCTGGTGTGTTTCATTGGCAGGAGAAGAGGCTAATTAAGTGAAACTGAAAGGTCCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000504666.5
CDS CCA 90 bp TATATTCAAGGCACGGCAGCAACAATCAAATGCCAAAATACAATCTaGGCTCAGCTCTTGGCCATTCCCTCTCCGAAGAATGTGTCTCAT +
Preference number: 5 (lower is better)
Translates to: YIQGTAATIKCQNTI*AQLLAIPSPKNVSH
Trigger: ATGAGACACATTCTTCGGAGAGGGAATGGCCAAGAGCTGAGCCCAGATTGTATTTTGGCATTTGATTGTTGCTGCCGTGCCTTGAATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504666.5
CDS TCA 90 bp TGTACAGCCTTTCAGTTTCACTTAATTAGCCTCTTCTCCTGCCAATaGAACACACCAGGGCTCACAGTTGGCCTCAGTAGAGAAGTAATA +
Preference number: 5 (lower is better)
Translates to: CTAFQFHLISLFSCQ*NTPGLTVGLSREVI
Trigger: TATTACTTCTCTACTGAGGCCAACTGTGAGCCCTGGTGTGTTTCATTGGCAGGAGAAGAGGCTAATTAAGTGAAACTGAAAGGCTGTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440765.2
CDS TCA 90 bp GATATGCCCTTTCAGTTTCACTTAATTAGCCTCTTCTCCTGCCAATaGAACACACCAGGGCTCACAGTTGGCCTCAGTAGAGAAGTAATA +
Preference number: 5 (lower is better)
Translates to: DMPFQFHLISLFSCQ*NTPGLTVGLSREVI
Trigger: TATTACTTCTCTACTGAGGCCAACTGTGAGCCCTGGTGTGTTTCATTGGCAGGAGAAGAGGCTAATTAAGTGAAACTGAAAGGGCATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507002.5
CDS-3UTR CAA 90 bp TCTCCTTTAATGGCACTCCTGACAGATGAGGAAACAAGCTCAGAGCAATTAAGCCTGGAACTATTGAACTaGTTGATCAGCCGTACCATG +
Preference number: 5 (lower is better)
Translates to: SPLMALLTDEETSSEQLSLELLN*LISRTM
Trigger: CATGGTACGGCTGATCAACAAGTTCAATAGTTCCAG...GCTTAATTGCTCTGAGCTTGTTTCCTCATCTGTCAGGAGTGCCATTAAAGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394817.7
CDS GCA 90 bp CTGGAGCTGGAACTATTGAACTTGTTGATCAGCCGTACCATGATCTaGATGTCAGTCTCAATGACAACATTCAGCTCATCAAAGTCTTTC +
Preference number: 5 (lower is better)
Translates to: LELELLNLLISRTMI*MSVSMTTFSSSKSF
Trigger: GAAAGACTTTGATGAGCTGAATGTTGTCATTGAGACTGACATGCAGATCATGGTACGGCTGATCAACAAGTTCAATAGTTCCAGCTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265195.9
ENST00000394817.7
ENST00000503732.1
ENST00000509534.5
CDS TCA 90 bp AAGAATAGCAGTCTGCACTTATCAAACTCAGCCACAATCTCAGTCTaGGTTGGTAAAACCGAAATGGCTCCTTGTTTCAGATGGTCAACA +
Preference number: 5 (lower is better)
Translates to: KNSSLHLSNSATISV*VGKTEMAPCFRWST
Trigger: TGTTGACCATCTGAAACAAGGAGCCATTTCGGTTTTACCAACTCAGACTGAGATTGTGGCTGAGTTTGATAAGTGCAGACTGCTATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508744.1
ENST00000509400.5
CDS TCA 90 bp TCTGTTTGTCCCTATTTAAACTTTGTATTATGCTATTCAGGAGGTTaGCAAACAGCCTTTTCGGGAATGGGACTCGAACTCGTAAGCCAC +
Preference number: 5 (lower is better)
Translates to: SVCPYLNFVLCYSGG*QTAFSGMGLELVSH
Trigger: GTGGCTTACGAGTTCGAGTCCCATTCCCGAAAAGGCTGTTTGTCAACCTCCTGAATAGCATAATACAAAGTTTAAATAGGGACAAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509400.5
CDS GCA 72 bp AGCGGCTGCTCCGTGGCCAGGATGACCAGCAGCTTCTaGAGGGCTCCCCCTTCGATGGCCTCCACCTGGACC +
Preference number: 6 (lower is better)
Translates to: SGCSVARMTSSF*RAPPSMASTWT
Trigger: GGTCCAGGTGGAGGCCATCGAAGGGGGAGCCCTGCAGAAGCTGCTGGTCATCCTGGCCACGGAGCAGCCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265195.9
ENST00000394817.7
ENST00000503732.1
ENST00000509534.5
ENST00000515008.1
CDS CCA 72 bp CGAGCTGGGGGTCCTGACGGTAGCGGTCCCGGCAGGTaGTCAGGAGGACGCCCAGTGTCTGCAGCACCTTCT +
Preference number: 6 (lower is better)
Translates to: RAGGPDGSGPGR*SGGRPVSAAPS
Trigger: AGAAGGTGCTGCAGACACTGGGCGTCCTCCTGACCACCTGCCGGGACCGCTACCGTCAGGACCCCCAGCTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265195.9
ENST00000394817.7
ENST00000509534.5
ENST00000515008.1
CDS CAA 72 bp TGCAGGGCTCCCCCTTCGATGGCCTCCACCTGGACCTaGGGGTTGAGGAGAGGGCCCGACACACAGCAGGCG +
Preference number: 6 (lower is better)
Translates to: CRAPPSMASTWT*GLRRGPDTQQA
Trigger: CGCCTGCTGTGTGTCGGGCCCTCTCCTCAACCCCAAGGTCCAGGTGGAGGCCATCGAAGGGGGAGCCCTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515008.1
CDS CCA 72 bp TTCTCACGGGCATCATGCTCGGGCAGCGCCAGGAGGTaGGCCGTGATCTCGCACCAGCCCTGTTCCCACAGG +
Preference number: 6 (lower is better)
Translates to: FSRASCSGSARR*AVISHQPCSHR
Trigger: CCTGTGGGAACAGGGCTGGTGCGAGATCACGGCCCACCTCCTGGCGCTGCCCGAGCATGATGCCCGTGAGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265195.9
ENST00000394817.7
ENST00000509534.5
ENST00000515008.1
CDS CCA 72 bp AGCTTCTGCAGGGCTCCCCCTTCGATGGCCTCCACCTaGACCTTGGGGTTGAGGAGAGGGCCCGACACACAG +
Preference number: 6 (lower is better)
Translates to: SFCRAPPSMAST*TLGLRRGPDTQ
Trigger: CTGTGTGTCGGGCCCTCTCCTCAACCCCAAGGTCCAGGTGGAGGCCATCGAAGGGGGAGCCCTGCAGAAGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515008.1
CDS CCA 72 bp GGCCGTGATCTCGCACCAGCCCTGTTCCCACAGGCCTaGCAGGAGGTGTACCTGGCGATACTGCTGCAGCTT +
Preference number: 6 (lower is better)
Translates to: GRDLAPALFPQA*QEVYLAILLQL
Trigger: AAGCTGCAGCAGTATCGCCAGGTACACCTCCTGCCAGGCCTGTGGGAACAGGGCTGGTGCGAGATCACGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265195.9
ENST00000394817.7
ENST00000509534.5
ENST00000515008.1
CDS GCA 72 bp TCCCACAGGCCTGGCAGGAGGTGTACCTGGCGATACTaGTGCAGCTTCTCTGGGGACATCTCCTGGGTCAGC +
Preference number: 6 (lower is better)
Translates to: SHRPGRRCTWRY*CSFSGDISWVS
Trigger: GCTGACCCAGGAGATGTCCCCAGAGAAGCTGCAGCAGTATCGCCAGGTACACCTCCTGCCAGGCCTGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265195.9
ENST00000394817.7
ENST00000509534.5
ENST00000515008.1
CDS CCA 72 bp CAGCCCTGTTCCCACAGGCCTGGCAGGAGGTGTACCTaGCGATACTGCTGCAGCTTCTCTGGGGACATCTCC +
Preference number: 6 (lower is better)
Translates to: QPCSHRPGRRCT*RYCCSFSGDIS
Trigger: GGAGATGTCCCCAGAGAAGCTGCAGCAGTATCGCCAGGTACACCTCCTGCCAGGCCTGTGGGAACAGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265195.9
ENST00000394817.7
ENST00000509534.5
ENST00000515008.1
CDS CCA 72 bp ATGCCCAGAGGAGCCATCCTAGATGAAGGCAGGCTCTaGGGAGCCATAGTCAGGGACCTTCGGCCTCCGGCA +
Preference number: 6 (lower is better)
Translates to: MPRGAILDEGRL*GAIVRDLRPPA
Trigger: TGCCGGAGGCCGAAGGTCCCTGACTATGGCTCCCCAGAGCCTGCCTTCATCTAGGATGGCTCCTCTGGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394817.7
CDS CCA 72 bp CTCATGTCTTCCACACAATTCAGACAAGACTGGGGGTaGGGATTGGGCCCTTCGGCCTCCGGCAGCCGAGTG +
Preference number: 6 (lower is better)
Translates to: LMSSTQFRQDWG*GLGPSASGSRV
Trigger: CACTCGGCTGCCGGAGGCCGAAGGGCCCAATCCCCACCCCCAGTCTTGTCTGAATTGTGTGGAAGACATGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508639.5
CDS CCA 72 bp TGGCGATACTGCTGCAGCTTCTCTGGGGACATCTCCTaGGTCAGCTCAGCCTCCTCCTCGGCGAACATCTTC +
Preference number: 6 (lower is better)
Translates to: WRYCCSFSGDIS*VSSASSSANIF
Trigger: GAAGATGTTCGCCGAGGAGGAGGCTGAGCTGACCCAGGAGATGTCCCCAGAGAAGCTGCAGCAGTATCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265195.9
ENST00000394817.7
ENST00000509534.5
ENST00000515008.1
CDS CCA 72 bp ATGCCCAGAGGAGCCATCCTAGATGAAGGCAGGCTCTaGGGAGCCATAGTCAGGGACCCAGCAGCAAAAGCC +
Preference number: 6 (lower is better)
Translates to: MPRGAILDEGRL*GAIVRDPAAKA
Trigger: GGCTTTTGCTGCTGGGTCCCTGACTATGGCTCCCCAGAGCCTGCCTTCATCTAGGATGGCTCCTCTGGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513453.5
CDS GCA 72 bp TTGGGGTTGAGGAGAGGGCCCGACACACAGCAGGCGTaGCCCCAAAGCTGGCTGAATGGAATGAAGATAGCT +
Preference number: 6 (lower is better)
Translates to: LGLRRGPDTQQA*PQSWLNGMKIA
Trigger: AGCTATCTTCATTCCATTCAGCCAGCTTTGGGGGCACGCCTGCTGTGTGTCGGGCCCTCTCCTCAACCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515008.1
CDS CCA 72 bp ATGCCCAGAGGAGCCATCCTAGATGAAGGCAGGCTCTaGGGAGCCATAGTCAGGGACGTGCCAGAGTTCATG +
Preference number: 6 (lower is better)
Translates to: MPRGAILDEGRL*GAIVRDVPEFM
Trigger: CATGAACTCTGGCACGTCCCTGACTATGGCTCCCCAGAGCCTGCCTTCATCTAGGATGGCTCCTCTGGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509534.5
CDS CCA 72 bp ATGCCCAGAGGAGCCATCCTAGATGAAGGCAGGCTCTaGGGAGCCATAGTCAGGGACAATTCTGAAGGCCAG +
Preference number: 6 (lower is better)
Translates to: MPRGAILDEGRL*GAIVRDNSEGQ
Trigger: CTGGCCTTCAGAATTGTCCCTGACTATGGCTCCCCAGAGCCTGCCTTCATCTAGGATGGCTCCTCTGGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505353.1
CDS CCA 72 bp AGAGGGCCCGACACACAGCAGGCGTGCCCCCAAAGCTaGCTGAATGGAATGAAGATAGCTCCCCACTTCTAT +
Preference number: 6 (lower is better)
Translates to: RGPDTQQACPQS*LNGMKIAPHFY
Trigger: ATAGAAGTGGGGAGCTATCTTCATTCCATTCAGCCAGCTTTGGGGGCACGCCTGCTGTGTGTCGGGCCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515008.1
CDS CCA 72 bp ATGCCCAGAGGAGCCATCCTAGATGAAGGCAGGCTCTaGGGAGCCATAGTCAGGGACATGTCAGACATTTCC +
Preference number: 6 (lower is better)
Translates to: MPRGAILDEGRL*GAIVRDMSDIS
Trigger: GGAAATGTCTGACATGTCCCTGACTATGGCTCCCCAGAGCCTGCCTTCATCTAGGATGGCTCCTCTGGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505830.5
ENST00000507002.5
CDS CCA 72 bp ATGCCCAGAGGAGCCATCCTAGATGAAGGCAGGCTCTaGGGAGCCATAGTCAGGGACCAATCTGTATTGCCA +
Preference number: 6 (lower is better)
Translates to: MPRGAILDEGRL*GAIVRDQSVLP
Trigger: TGGCAATACAGATTGGTCCCTGACTATGGCTCCCCAGAGCCTGCCTTCATCTAGGATGGCTCCTCTGGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508639.5
CDS CAA 90 bp CTCCTTCACGAGGGGCTCTGTGCTGTTCAGCCCATTGATCACCACTaGAAGACCACCAAAGGAAAGCAGGTCCTGCGCATTGTCCATCTG +
Preference number: 6 (lower is better)
Translates to: LLHEGLCAVQPIDHH*KTTKGKQVLRIVHL
Trigger: CAGATGGACAATGCGCAGGACCTGCTTTCCTTTGGTGGTCTTCAAGTGGTGATCAATGGGCTGAACAGCACAGAGCCCCTCGTGAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265195.9
ENST00000394817.7
ENST00000503732.1
ENST00000509534.5
CDS TCA 72 bp AGGGGCTCTGTGCTGTTCAGCCCATTGATCACCACTTaGAGACCACCAAAGGAAAGCAGGTCCTGCGCATTG +
Preference number: 6 (lower is better)
Translates to: RGSVLFSPLITT*RPPKESRSCAL
Trigger: CAATGCGCAGGACCTGCTTTCCTTTGGTGGTCTTCAAGTGGTGATCAATGGGCTGAACAGCACAGAGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265195.9
ENST00000394817.7
ENST00000503732.1
ENST00000505945.1
ENST00000509534.5
CDS GCA 72 bp GAGTCAGAATTCAAAGCCAGTTTGGCCCCAAAGCCATaGTCTTTCCATAGCCGTGCTGTCTCTCGAGGGGTC +
Preference number: 6 (lower is better)
Translates to: ESEFKASLAPKP*SFHSRAVSRGV
Trigger: GACCCCTCGAGAGACAGCACGGCTATGGAAAGAGCATGGCTTTGGGGCCAAACTGGCTTTGAATTCTGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509534.5
CDS CCA 72 bp ATGCCCAGAGGAGCCATCCTAGATGAAGGCAGGCTCTaGGGAGCCATAGTCAGGGACCTTTCAGTTTCACTT +
Preference number: 6 (lower is better)
Translates to: MPRGAILDEGRL*GAIVRDLSVSL
Trigger: AAGTGAAACTGAAAGGTCCCTGACTATGGCTCCCCAGAGCCTGCCTTCATCTAGGATGGCTCCTCTGGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265195.9
ENST00000504666.5
CDS CAA 72 bp GAGGGGCTCTGTGCTGTTCAGCCCATTGATCACCACTaGAAGACCACCAAAGGAAAGCAGGTCCTGCGCATT +
Preference number: 6 (lower is better)
Translates to: EGLCAVQPIDHH*KTTKGKQVLRI
Trigger: AATGCGCAGGACCTGCTTTCCTTTGGTGGTCTTCAAGTGGTGATCAATGGGCTGAACAGCACAGAGCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265195.9
ENST00000394817.7
ENST00000503732.1
ENST00000505945.1
ENST00000509534.5
CDS CAA 90 bp CTCCTTCACGAGGGGCTCTGTGCTGTTCAGCCCATTGATCACCACTaGAAGACCACCAAAGGAAAGCAGGTCCTGCGCATTGTCCATCTT +
Preference number: 6 (lower is better)
Translates to: LLHEGLCAVQPIDHH*KTTKGKQVLRIVHL
Trigger: AAGATGGACAATGCGCAGGACCTGCTTTCCTTTGGTGGTCTTCAAGTGGTGATCAATGGGCTGAACAGCACAGAGCCCCTCGTGAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505945.1
CDS TCA 72 bp ACTCCTTCACGAGGGGCTCTGTGCTGTTCAGCCCATTaGTCACCACTTGAAGACCACCAAAGGAAAGCAGGT +
Preference number: 6 (lower is better)
Translates to: TPSRGALCCSAH*SPLEDHQRKAG
Trigger: ACCTGCTTTCCTTTGGTGGTCTTCAAGTGGTGATCAATGGGCTGAACAGCACAGAGCCCCTCGTGAAGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265195.9
ENST00000394817.7
ENST00000503732.1
ENST00000505945.1
ENST00000509534.5
CDS CCA 72 bp GAGGCCGGTCCTGCAGAGGTCAGCAGTAGGAGTGACTaGCTTAATCTATTCGAAAACCTCCTGGAAAGATCC +
Preference number: 6 (lower is better)
Translates to: EAGPAEVSSRSD*LNLFENLLERS
Trigger: GGATCTTTCCAGGAGGTTTTCGAATAGATTAAGCCAGTCACTCCTACTGCTGACCTCTGCAGGACCGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508744.1
CDS CCA 72 bp CATTCAGCTCATCAAAGTCTTTCTTCAGTTCCTCAATaGGGCGGAAGAGCCGCTTTACCTCAGCCTGCCTTG +
Preference number: 6 (lower is better)
Translates to: HSAHQSLSSVPQ*GGRAALPQPAL
Trigger: CAAGGCAGGCTGAGGTAAAGCGGCTCTTCCGCCCCATTGAGGAACTGAAGAAAGACTTTGATGAGCTGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265195.9
ENST00000394817.7
ENST00000503732.1
ENST00000509534.5
CDS CAA 72 bp AGCCACAGAGCAGTAGAGTCAGAATTCAAAGCCAGTTaGGCCCCAAAGCCATGCTCTTTCCATAGCCGTGCT +
Preference number: 6 (lower is better)
Translates to: SHRAVESEFKAS*APKPCSFHSRA
Trigger: AGCACGGCTATGGAAAGAGCATGGCTTTGGGGCCAAACTGGCTTTGAATTCTGACTCTACTGCTCTGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509534.5
CDS CAA 90 bp GTTCCAGCTGAAGACTCTCATCTTAGCTTGCAGATGGCTGCCCTCTaGCCATGTCTTCACATGGCCTTTCCTCAGTATACACACACACGT +
Preference number: 6 (lower is better)
Translates to: VPAEDSHLSLQMAAL*PCLHMAFPQYTHTR
Trigger: ACGTGTGTGTGTATACTGAGGAAAGGCCATGTGAAGACATGGCAAGAGGGCAGCCATCTGCAAGCTAAGATGAGAGTCTTCAGCTGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505353.1
CDS CAA 90 bp CAGAAGTCCAAGATCAAGGTTCCAGCTGAAGACTCTCATCTTAGCTaGCAGATGGCTGCCCTCTTGCCATGTCTTCACATGGCCTTTCCT +
Preference number: 6 (lower is better)
Translates to: QKSKIKVPAEDSHLS*QMAALLPCLHMAFP
Trigger: AGGAAAGGCCATGTGAAGACATGGCAAGAGGGCAGCCATCTGCAAGCTAAGATGAGAGTCTTCAGCTGGAACCTTGATCTTGGACTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505353.1
CDS GCA 72 bp AGATCAAGGTTCCAGCTGAAGACTCTCATCTTAGCTTaGAGATGGCTGCCCTCTTGCCATGTCTTCACATGG +
Preference number: 6 (lower is better)
Translates to: RSRFQLKTLILA*RWLPSCHVFTW
Trigger: CCATGTGAAGACATGGCAAGAGGGCAGCCATCTGCAAGCTAAGATGAGAGTCTTCAGCTGGAACCTTGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505353.1
CDS GCA 72 bp AAGACTCTCATCTTAGCTTGCAGATGGCTGCCCTCTTaGCATGTCTTCACATGGCCTTTCCTCAGTATACAC +
Preference number: 6 (lower is better)
Translates to: KTLILACRWLPS*HVFTWPFLSIH
Trigger: GTGTATACTGAGGAAAGGCCATGTGAAGACATGGCAAGAGGGCAGCCATCTGCAAGCTAAGATGAGAGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505353.1
CDS CAA 72 bp AAGATCAAGGTTCCAGCTGAAGACTCTCATCTTAGCTaGCAGATGGCTGCCCTCTTGCCATGTCTTCACATG +
Preference number: 6 (lower is better)
Translates to: KIKVPAEDSHLS*QMAALLPCLHM
Trigger: CATGTGAAGACATGGCAAGAGGGCAGCCATCTGCAAGCTAAGATGAGAGTCTTCAGCTGGAACCTTGATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505353.1
CDS CCA 72 bp CTATTCGAAAACCTCCTGGAAAGATCCCGAAGACCGTaGACCAAGGTGACAGCAGTTCTCTCCACTTTTAAT +
Preference number: 6 (lower is better)
Translates to: LFENLLERSRRP*TKVTAVLSTFN
Trigger: ATTAAAAGTGGAGAGAACTGCTGTCACCTTGGTCCACGGTCTTCGGGATCTTTCCAGGAGGTTTTCGAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508744.1
CDS CAA 72 bp AACCGAAATGGCTCCTTGTTTCAGATGGTCAACATCTaGGCTACTCTTGCTGTAGTGTGCAGTGGGTTCTGT +
Preference number: 6 (lower is better)
Translates to: NRNGSLFQMVNI*ATLAVVCSGFC
Trigger: ACAGAACCCACTGCACACTACAGCAAGAGTAGCCAAGATGTTGACCATCTGAAACAAGGAGCCATTTCGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508744.1
ENST00000509400.5
CDS CCA 72 bp CAATCAAATGCCAAAATACAATCTGGGCTCAGCTCTTaGCCATTCCCTCTCCGAAGAATGTGTCTCATTGAA +
Preference number: 6 (lower is better)
Translates to: QSNAKIQSGLSS*PFPLRRMCLIE
Trigger: TTCAATGAGACACATTCTTCGGAGAGGGAATGGCCAAGAGCTGAGCCCAGATTGTATTTTGGCATTTGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504666.5
CDS CAA 72 bp TTCTCTTCCAAACTGGAGCTGGAACTATTGAACTTGTaGATCAGCCGTACCATGATCTGCATGTCAGTCTCA +
Preference number: 6 (lower is better)
Translates to: FSSKLELELLNL*ISRTMICMSVS
Trigger: TGAGACTGACATGCAGATCATGGTACGGCTGATCAACAAGTTCAATAGTTCCAGCTCCAGTTTGGAAGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265195.9
ENST00000394817.7
ENST00000503732.1
ENST00000509534.5
CDS CAA 90 bp TTTTGCCTTTCAAATTATTTCGGAACTTGTCCTCATATTGGAGTTTaGCCTCTCTTTCCCCAGTCTGAAGATTCAGCCGTACGTGGGATC +
Preference number: 6 (lower is better)
Translates to: FCLSNYFGTCPHIGV*PLFPQSEDSAVRGI
Trigger: GATCCCACGTACGGCTGAATCTTCAGACTGGGGAAAGAGAGGCAAAACTCCAATATGAGGACAAGTTCCGAAATAATTTGAAAGGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265195.9
ENST00000394817.7
ENST00000503732.1
ENST00000508639.5
ENST00000509534.5
ENST00000513453.5
CDS TCA 72 bp CTCTTGGCCATTCCCTCTCCGAAGAATGTGTCTCATTaGAGAAAGGGCATTATAGGCTTTATCTTTCTTCCA +
Preference number: 6 (lower is better)
Translates to: LLAIPSPKNVSH*RKGIIGFIFLP
Trigger: TGGAAGAAAGATAAAGCCTATAATGCCCTTTCTTCAATGAGACACATTCTTCGGAGAGGGAATGGCCAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504666.5
CDS TCA 72 bp AGTCTGCACTTATCAAACTCAGCCACAATCTCAGTCTaGGTTGGTAAAACCGAAATGGCTCCTTGTTTCAGA +
Preference number: 6 (lower is better)
Translates to: SLHLSNSATISV*VGKTEMAPCFR
Trigger: TCTGAAACAAGGAGCCATTTCGGTTTTACCAACTCAGACTGAGATTGTGGCTGAGTTTGATAAGTGCAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508744.1
ENST00000509400.5
CDS CAA 72 bp TGCACTTATCAAACTCAGCCACAATCTCAGTCTGAGTaGGTAAAACCGAAATGGCTCCTTGTTTCAGATGGT +
Preference number: 6 (lower is better)
Translates to: CTYQTQPQSQSE*VKPKWLLVSDG
Trigger: ACCATCTGAAACAAGGAGCCATTTCGGTTTTACCAACTCAGACTGAGATTGTGGCTGAGTTTGATAAGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508744.1
ENST00000509400.5
CDS CAA 90 bp CTAAGGCATACCCTATTTAAACTTTGTATTATGCTATTCAGGAGGTaGACAAACAGCCTTTTCGGGAATGGGACTCGAACTCGTAAGCCA +
Preference number: 6 (lower is better)
Translates to: LRHTLFKLCIMLFRR*TNSLFGNGTRTRKP
Trigger: TGGCTTACGAGTTCGAGTCCCATTCCCGAAAAGGCTGTTTGTCAACCTCCTGAATAGCATAATACAAAGTTTAAATAGGGTATGCCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508744.1
CDS GCA 72 bp GAACTATTGAACTTGTTGATCAGCCGTACCATGATCTaGATGTCAGTCTCAATGACAACATTCAGCTCATCA +
Preference number: 6 (lower is better)
Translates to: ELLNLLISRTMI*MSVSMTTFSSS
Trigger: TGATGAGCTGAATGTTGTCATTGAGACTGACATGCAGATCATGGTACGGCTGATCAACAAGTTCAATAGTTC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265195.9
ENST00000394817.7
ENST00000503732.1
ENST00000509534.5
CDS CAA 90 bp TTCTGTTTGTCCCTATTTAAACTTTGTATTATGCTATTCAGGAGGTaGACAAACAGCCTTTTCGGGAATGGGACTCGAACTCGTAAGCCA +
Preference number: 6 (lower is better)
Translates to: FCLSLFKLCIMLFRR*TNSLFGNGTRTRKP
Trigger: TGGCTTACGAGTTCGAGTCCCATTCCCGAAAAGGCTGTTTGTCAACCTCCTGAATAGCATAATACAAAGTTTAAATAGGGACAAACAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509400.5
CDS CAA 72 bp ACCCTATTTAAACTTTGTATTATGCTATTCAGGAGGTaGACAAACAGCCTTTTCGGGAATGGGACTCGAACT +
Preference number: 6 (lower is better)
Translates to: TLFKLCIMLFRR*TNSLFGNGTRT
Trigger: AGTTCGAGTCCCATTCCCGAAAAGGCTGTTTGTCAACCTCCTGAATAGCATAATACAAAGTTTAAATAGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508744.1
CDS CAA 72 bp TCCCTATTTAAACTTTGTATTATGCTATTCAGGAGGTaGACAAACAGCCTTTTCGGGAATGGGACTCGAACT +
Preference number: 6 (lower is better)
Translates to: SLFKLCIMLFRR*TNSLFGNGTRT
Trigger: AGTTCGAGTCCCATTCCCGAAAAGGCTGTTTGTCAACCTCCTGAATAGCATAATACAAAGTTTAAATAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509400.5
CDS CAA 72 bp TTTGCCTTTCAAATTATTTCGGAACTTGTCCTCATATaGGAGTTTTGCCTCTCTTTCCCCAGTCTGAAGATT +
Preference number: 6 (lower is better)
Translates to: FAFQIISELVLI*EFCLSFPSLKI
Trigger: AATCTTCAGACTGGGGAAAGAGAGGCAAAACTCCAATATGAGGACAAGTTCCGAAATAATTTGAAAGGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265195.9
ENST00000394817.7
ENST00000503732.1
ENST00000508639.5
ENST00000509534.5
ENST00000513453.5