RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SIK2 (Homo sapiens)

Ensembl gene IDs: ENSG00000170145

Ensembl transcript IDs: ENST00000304987.4, ENST00000533868.1

Found 567 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGTCACGCTCTGCATCAGGCCGGTGTCCACGCCGCTGCCGTGTGTaGCGGATCCTGATAGGCCTGGCTGCTGTAGGGCACCTCTCGATT +
Preference number: 1 (lower is better)
Translates to: GSRSASGRCPRRCRV*RILIGLAAVGHLSI
Trigger: AATCGAGAGGTGCCCTACAGCAGCCAGGCCTATCAGGATCCGTCACACACGGCAGCGGCGTGGACACCGGCCTGATGCAGAGCGTGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR TCA 90 bp GAGCCTGTCTTCCCTGGCCCAGGGCTGGTGCTCTTGATGCGTTCTTaGGTTTCTTGCCCCCTGCCTCCACGGTGGCGGGTCTCCTGTCAG +
Preference number: 1 (lower is better)
Translates to: EPVFPGPGLVLLMRS*VSCPLPPRWRVSCQ
Trigger: CTGACAGGAGACCCGCCACCGTGGAGGCAGGGGGCAAGAAACTCAAGAACGCATCAAGAGCACCAGCCCTGGGCCAGGGAAGACAGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CCA 90 bp GGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCTCTCCCTGGGTaGGTCTGCGAGCACTGCTGCCGCCTGGTTCTCTATCTGTGCCCC +
Preference number: 1 (lower is better)
Translates to: GEQSIWAEPITALPG*VCEHCCRLVLYLCP
Trigger: GGGGCACAGATAGAGAACCAGGCGGCAGCAGTGCTCGCAGACCCACCCAGGGAGAGCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR GCA 90 bp GCAGAACCCATCACAGCTCTCCCTGGGTGGGTCTGCGAGCACTGCTaGCGCCTGGTTCTCTATCTGTGCCCCAGTGTGTGCCTGAGTCTG +
Preference number: 1 (lower is better)
Translates to: AEPITALPGWVCEHC*RLVLYLCPSVCLSL
Trigger: CAGACTCAGGCACACACTGGGGCACAGATAGAGAACCAGGCGGCAGCAGTGCTCGCAGACCCACCCAGGGAGAGCTGTGATGGGTTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR GCA 90 bp TGGGCAGAACCCATCACAGCTCTCCCTGGGTGGGTCTGCGAGCACTaGTGCCGCCTGGTTCTCTATCTGTGCCCCAGTGTGTGCCTGAGT +
Preference number: 1 (lower is better)
Translates to: WAEPITALPGWVCEH*CRLVLYLCPSVCLS
Trigger: ACTCAGGCACACACTGGGGCACAGATAGAGAACCAGGCGGCAGCAGTGCTCGCAGACCCACCCAGGGAGAGCTGTGATGGGTTCTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CCA 90 bp GAGCACAGTGCCTCTGCGAAGCATCCTGGCACCCATGGTGAGCGCTaGCGACCAGGCAGTCTCTGGCCAGCAACAGGGACTGCTCAAGTT +
Preference number: 1 (lower is better)
Translates to: EHSASAKHPGTHGER*RPGSLWPATGTAQV
Trigger: AACTTGAGCAGTCCCTGTTGCTGGCCAGAGACTGCCTGGTCGCCAGCGCTCACCATGGGTGCCAGGATGCTTCGCAGAGGCACTGTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CCA 90 bp GGTGGGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCTCTCCCTaGGTGGGTCTGCGAGCACTGCTGCCGCCTGGTTCTCTATCTGTG +
Preference number: 1 (lower is better)
Translates to: GGRAEYLGRTHHSSP*VGLRALLPPGSLSV
Trigger: CACAGATAGAGAACCAGGCGGCAGCAGTGCTCGCAGACCCACCCAGGGAGAGCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CCA 90 bp GAGTTCATGACCGTTCCTGGGGTGGAATCTGCTGGCCTGCAGTGGTaGCCTGATGCCGTGCGATGCGGCCCCTTGGCAATTGAGGAAGGG +
Preference number: 1 (lower is better)
Translates to: EFMTVPGVESAGLQW*PDAVRCGPLAIEEG
Trigger: CCCTTCCTCAATTGCCAAGGGGCCGCATCGCACGGCATCAGGCCACCACTGCAGGCCAGCAGATTCCACCCCAGGAACGGTCATGAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CCA 90 bp AAGCATCCTGGCACCCATGGTGAGCGCTGGCGACCAGGCAGTCTCTaGCCAGCAACAGGGACTGCTCAAGTTACCGACGTTGGTAGGAGC +
Preference number: 1 (lower is better)
Translates to: KHPGTHGERWRPGSL*PATGTAQVTDVGRS
Trigger: GCTCCTACCAACGTCGGTAACTTGAGCAGTCCCTGTTGCTGGCCAGAGACTGCCTGGTCGCCAGCGCTCACCATGGGTGCCAGGATGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR GCA 90 bp TCACTGTGTCCTTGCATCCTCAACTGCCCGCATGTCTCCAGAGGCTaGTTAGTGCCCACACGCCTGGGACCAACTGTGACTCCAGGCTGC +
Preference number: 1 (lower is better)
Translates to: SLCPCILNCPHVSRG*LVPTRLGPTVTPGC
Trigger: GCAGCCTGGAGTCACAGTTGGTCCCAGGCGTGTGGGCACTAAGCAGCCTCTGGAGACATGCGGGCAGTTGAGGATGCAAGGACACAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR GCA 90 bp GGCTGGAGGACCCCAAAAAGGAGCGCCACTCACTCACTGTGTCCTTaGATCCTCAACTGCCCGCATGTCTCCAGAGGCTGCTTAGTGCCC +
Preference number: 1 (lower is better)
Translates to: GWRTPKRSATHSLCP*ILNCPHVSRGCLVP
Trigger: GGGCACTAAGCAGCCTCTGGAGACATGCGGGCAGTTGAGGATGCAAGGACACAGTGAGTGAGTGGCGCTCCTTTTTGGGGTCCTCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR GCA 90 bp CTGACACTCGGCAACCCAGGGCACCTTCTGAAGGGGTGTGTCACCTaGTTCCGAATGGAGATGAAGGCGGTTTCTGGGGTCAGTACCAGC +
Preference number: 1 (lower is better)
Translates to: LTLGNPGHLLKGCVT*FRMEMKAVSGVSTS
Trigger: GCTGGTACTGACCCCAGAAACCGCCTTCATCTCCATTCGGAAGCAGGTGACACACCCCTTCAGAAGGTGCCCTGGGTTGCCGAGTGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR GCA 90 bp CCAAAAAGGAGCGCCACTCACTCACTGTGTCCTTGCATCCTCAACTaGCCGCATGTCTCCAGAGGCTGCTTAGTGCCCACACGCCTGGGA +
Preference number: 1 (lower is better)
Translates to: PKRSATHSLCPCILN*PHVSRGCLVPTRLG
Trigger: TCCCAGGCGTGTGGGCACTAAGCAGCCTCTGGAGACATGCGGGCAGTTGAGGATGCAAGGACACAGTGAGTGAGTGGCGCTCCTTTTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CCA 90 bp CAGGGACTGCTCAAGTTACCGACGTTGGTAGGAGCTGGGCTCGCATaGCCAGAATGGAACCCCCTAGACTTTCCACACGTCACCTGCCTG +
Preference number: 1 (lower is better)
Translates to: QGLLKLPTLVGAGLA*PEWNPLDFPHVTCL
Trigger: CAGGCAGGTGACGTGTGGAAAGTCTAGGGGGTTCCATTCTGGCCATGCGAGCCCAGCTCCTACCAACGTCGGTAACTTGAGCAGTCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CCA 90 bp CTGCTGGCCTGCAGTGGTGGCCTGATGCCGTGCGATGCGGCCCCTTaGCAATTGAGGAAGGGGGTGTTCTGTAGGAAACTGCTGTATTGT +
Preference number: 1 (lower is better)
Translates to: LLACSGGLMPCDAAP*QLRKGVFCRKLLYC
Trigger: ACAATACAGCAGTTTCCTACAGAACACCCCCTTCCTCAATTGCCAAGGGGCCGCATCGCACGGCATCAGGCCACCACTGCAGGCCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CCA 90 bp TGGCCAGCAACAGGGACTGCTCAAGTTACCGACGTTGGTAGGAGCTaGGCTCGCATGGCCAGAATGGAACCCCCTAGACTTTCCACACGT +
Preference number: 1 (lower is better)
Translates to: WPATGTAQVTDVGRS*ARMARMEPPRLSTR
Trigger: ACGTGTGGAAAGTCTAGGGGGTTCCATTCTGGCCATGCGAGCCCAGCTCCTACCAACGTCGGTAACTTGAGCAGTCCCTGTTGCTGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CCA 90 bp CTGGTGGGCCCTGATGCTCTCCCACGCAGGGATTCTCAAGGTGGATaGTGTAGAGAACCATCAGCCTCCTTTTCCCACGGTGACAGAAGG +
Preference number: 1 (lower is better)
Translates to: LVGPDALPRRDSQGG*CREPSASFSHGDRR
Trigger: CCTTCTGTCACCGTGGGAAAAGGAGGCTGATGGTTCTCTACACCATCCACCTTGAGAATCCCTGCGTGGGAGAGCATCAGGGCCCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CCA 90 bp GTGCCCCAGTGTGTGCCTGAGTCTGCTGATAGGTTGAAACCTGCCTaGAGAAGATGTGGACACAAGGTGGGGGTGCACGTAGGATGGCTG +
Preference number: 1 (lower is better)
Translates to: VPQCVPESADRLKPA*RRCGHKVGVHVGWL
Trigger: CAGCCATCCTACGTGCACCCCCACCTTGTGTCCACATCTTCTCCAGGCAGGTTTCAACCTATCAGCAGACTCAGGCACACACTGGGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CCA 90 bp CTCAAGTTACCGACGTTGGTAGGAGCTGGGCTCGCATGGCCAGAATaGAACCCCCTAGACTTTCCACACGTCACCTGCCTGAACGCTAAC +
Preference number: 1 (lower is better)
Translates to: LKLPTLVGAGLAWPE*NPLDFPHVTCLNAN
Trigger: GTTAGCGTTCAGGCAGGTGACGTGTGGAAAGTCTAGGGGGTTCCATTCTGGCCATGCGAGCCCAGCTCCTACCAACGTCGGTAACTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR TCA 90 bp TGTAAGGAAATGTTACGCCCCTCGTTGAGACAAAGGCTGAGTTCATaGCCGTTCCTGGGGTGGAATCTGCTGGCCTGCAGTGGTGGCCTG +
Preference number: 1 (lower is better)
Translates to: CKEMLRPSLRQRLSS*PFLGWNLLACSGGL
Trigger: CAGGCCACCACTGCAGGCCAGCAGATTCCACCCCAGGAACGGTCATGAACTCAGCCTTTGTCTCAACGAGGGGCGTAACATTTCCTTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR GCA 90 bp CACCGGGAATGTGAAAGTGGGCCCCCTCTTCCTGTCGGGCTAACATaGTGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAGATA +
Preference number: 1 (lower is better)
Translates to: HRECESGPPLPVGLT*CLPYRDQCISCVEI
Trigger: TATCTCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACAGGAAGAGGGGGCCCACTTTCACATTCCCGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CCA 90 bp CAGCCTACAACTATGTTCCAGCACTTGCCACAGAAAACTTTGTGGTaGGGCAGAACCAGGAGGAAGCAACATCCACCCCAGCCAGACCCT +
Preference number: 1 (lower is better)
Translates to: QPTTMFQHLPQKTLW*GRTRRKQHPPQPDP
Trigger: AGGGTCTGGCTGGGGTGGATGTTGCTTCCTCCTGGTTCTGCCCCACCACAAAGTTTTCTGTGGCAAGTGCTGGAACATAGTTGTAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CCA 90 bp TTAGAGGCAGCCCAGTTTAGGAGTTTGAGTGTAGCAGGTCAGCCCTaGCACCGGTGTCAGCCACTGTTCACAGGGACTGAGACTGTGAAA +
Preference number: 1 (lower is better)
Translates to: LEAAQFRSLSVAGQP*HRCQPLFTGTETVK
Trigger: TTTCACAGTCTCAGTCCCTGTGAACAGTGGCTGACACCGGTGCCAGGGCTGACCTGCTACACTCAAACTCCTAAACTGGGCTGCCTCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR TCA 90 bp TCCACTGCTTTCGTTCACCTGCCACCAAGGGCCAGACAAGGGCTCTaGCATTACAGGTGCTTCAGACCACACTGTAGAACCTGTCAGAAG +
Preference number: 1 (lower is better)
Translates to: STAFVHLPPRARQGL*HYRCFRPHCRTCQK
Trigger: CTTCTGACAGGTTCTACAGTGTGGTCTGAAGCACCTGTAATGTCAGAGCCCTTGTCTGGCCCTTGGTGGCAGGTGAACGAAAGCAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR TCA 90 bp CACTGTCACCTGAAGGCGGCCTCTTCCCCAAAGCCAGGCGGCTGTTaGGTGGAGAATAAGGTTGTGGGAACAATATCACATTCACCCTGT +
Preference number: 1 (lower is better)
Translates to: HCHLKAASSPKPGGC*VENKVVGTISHSPC
Trigger: ACAGGGTGAATGTGATATTGTTCCCACAACCTTATTCTCCACTCAACAGCCGCCTGGCTTTGGGGAAGAGGCCGCCTTCAGGTGACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR GCA 90 bp AATGTCTTCTTAGGAACACATTTGTCAGTGCTGCCCTCGAGAGCTTaGTCCACTCGACCGAAGGGCAGGAGCCTCAGCCTACAACTATGT +
Preference number: 1 (lower is better)
Translates to: NVFLGTHLSVLPSRA*STRPKGRSLSLQLC
Trigger: ACATAGTTGTAGGCTGAGGCTCCTGCCCTTCGGTCGAGTGGAGCAAGCTCTCGAGGGCAGCACTGACAAATGTGTTCCTAAGAAGACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR GCA 90 bp GTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGTATCAGTTaGGTGGAGATACTAGAGACACACTTGCCCAGCTGGGAATTGCAG +
Preference number: 1 (lower is better)
Translates to: VGLTCCLPYRDQCIS*VEILETHLPSWELQ
Trigger: CTGCAATTCCCAGCTGGGCAAGTGTGTCTCTAGTATCTCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CCA 90 bp GTTCTCCAATTTTCACCTTTCATGTTTAGGCACAAAGAGACCGAGTaGCTCGGGTGGCTTCCCAGGAGGCAGTTAGAGGCAGCCCAGTTT +
Preference number: 1 (lower is better)
Translates to: VLQFSPFMFRHKETE*LGWLPRRQLEAAQF
Trigger: AAACTGGGCTGCCTCTAACTGCCTCCTGGGAAGCCACCCGAGCCACTCGGTCTCTTTGTGCCTAAACATGAAAGGTGAAAATTGGAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR TCA 90 bp TTACCACCCATGGTGGAAAGGTCTCACCACTTGAATTTCCTTGACTaGGCAAATCTTCTGCAGACAGACACCACAGAGCCAGCAGCAGCC +
Preference number: 1 (lower is better)
Translates to: LPPMVERSHHLNFLD*ANLLQTDTTEPAAA
Trigger: GGCTGCTGCTGGCTCTGTGGTGTCTGTCTGCAGAAGATTTGCTCAGTCAAGGAAATTCAAGTGGTGAGACCTTTCCACCATGGGTGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR TCA 90 bp TCTCTTACCACCCATGGTGGAAAGGTCTCACCACTTGAATTTCCTTaGCTGAGCAAATCTTCTGCAGACAGACACCACAGAGCCAGCAGC +
Preference number: 1 (lower is better)
Translates to: SLTTHGGKVSPLEFP*LSKSSADRHHRASS
Trigger: GCTGCTGGCTCTGTGGTGTCTGTCTGCAGAAGATTTGCTCAGTCAAGGAAATTCAAGTGGTGAGACCTTTCCACCATGGGTGGTAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR GCA 90 bp CTCGCATGGCCAGAATGGAACCCCCTAGACTTTCCACACGTCACCTaGCTGAACGCTAACTACAAAGAGGAAAGGCAACTTAAAGGTGTT +
Preference number: 1 (lower is better)
Translates to: LAWPEWNPLDFPHVT*LNANYKEERQLKGV
Trigger: AACACCTTTAAGTTGCCTTTCCTCTTTGTAGTTAGCGTTCAGGCAGGTGACGTGTGGAAAGTCTAGGGGGTTCCATTCTGGCCATGCGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CCA 90 bp AATCACTCTGGAGCTGAGAATATCCTTCTCCCCACATCTAACCCGTaGGCAGAATTCTGTGAGCGTTTCCCTGCCTTTAGGACTGATGAC +
Preference number: 1 (lower is better)
Translates to: NHSGAENILLPTSNP*AEFCERFPAFRTDD
Trigger: GTCATCAGTCCTAAAGGCAGGGAAACGCTCACAGAATTCTGCCCACGGGTTAGATGTGGGGAGAAGGATATTCTCAGCTCCAGAGTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR TCA 90 bp TGGCACCGGTGTCAGCCACTGTTCACAGGGACTGAGACTGTGAAATaGCACACTGCATATTGTCTCTATAGGAGGTCGAATGGGAAAAAG +
Preference number: 1 (lower is better)
Translates to: WHRCQPLFTGTETVK*HTAYCLYRRSNGKK
Trigger: CTTTTTCCCATTCGACCTCCTATAGAGACAATATGCAGTGTGTCATTTCACAGTCTCAGTCCCTGTGAACAGTGGCTGACACCGGTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR TCA 90 bp AAGGCAGGTTTCTCTTACCACCCATGGTGGAAAGGTCTCACCACTTaGATTTCCTTGACTGAGCAAATCTTCTGCAGACAGACACCACAG +
Preference number: 1 (lower is better)
Translates to: KAGFSYHPWWKGLTT*ISLTEQIFCRQTPQ
Trigger: CTGTGGTGTCTGTCTGCAGAAGATTTGCTCAGTCAAGGAAATTCAAGTGGTGAGACCTTTCCACCATGGGTGGTAAGAGAAACCTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR TCA 90 bp GAAGCAAACCTTTCTCTCCACTTCTTTCCCCTTCAGAGATTTTGGTaGAGGCAGGTTTCTCTTACCACCCATGGTGGAAAGGTCTCACCA +
Preference number: 1 (lower is better)
Translates to: EANLSLHFFPLQRFW*RQVSLTTHGGKVSP
Trigger: TGGTGAGACCTTTCCACCATGGGTGGTAAGAGAAACCTGCCTTCACCAAAATCTCTGAAGGGGAAAGAAGTGGAGAGAAAGGTTTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CCA 90 bp TTGGTAAAACTAATGTACAAATATAAGCTATTGCTCCCTTGTGGGTaGGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCTCTCCCTG +
Preference number: 1 (lower is better)
Translates to: LVKLMYKYKLLLPCG*ASRVSGQNPSQLSL
Trigger: CAGGGAGAGCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATAGCTTATATTTGTACATTAGTTTTACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR TCA 90 bp GGTGATGAAGCTGATGATGATACAGTAGTGTACACACTGCTAACGTaGATCAGACTGGAAAGCAAGTCAGTACTTCAGAGTAGCCCCGCA +
Preference number: 1 (lower is better)
Translates to: GDEADDDTVVYTLLT*IRLESKSVLQSSPA
Trigger: TGCGGGGCTACTCTGAAGTACTGACTTGCTTTCCAGTCTGATTCACGTTAGCAGTGTGTACACTACTGTATCATCATCAGCTTCATCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR TCA 90 bp GTGCTTGACCAAAATGGGGGCTTTGTTTATACAGCTGTTTGCTTATaGAAAGAGTCAGATGCTACTGAGGAAAGAGAAGGGAAAGAGAGG +
Preference number: 1 (lower is better)
Translates to: VLDQNGGFVYTAVCL*KESDATEEREGKER
Trigger: CCTCTCTTTCCCTTCTCTTTCCTCAGTAGCATCTGACTCTTTTCATAAGCAAACAGCTGTATAAACAAAGCCCCCATTTTGGTCAAGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR GCA 90 bp TTCTACAAAGTGCAGATATCTCTGTATCCCTTTTATTTCTCAAACTaGAGTCCCCGAAGTGAAGCAAACCTTTCTCTCCACTTCTTTCCC +
Preference number: 1 (lower is better)
Translates to: FYKVQISLYPFYFSN*SPRSEANLSLHFFP
Trigger: GGGAAAGAAGTGGAGAGAAAGGTTTGCTTCACTTCGGGGACTGCAGTTTGAGAAATAAAAGGGATACAGAGATATCTGCACTTTGTAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR TCA 90 bp GTGGAGAATAAGGTTGTGGGAACAATATCACATTCACCCTGTGCTTaGCCAAAATGGGGGCTTTGTTTATACAGCTGTTTGCTTATGAAA +
Preference number: 1 (lower is better)
Translates to: VENKVVGTISHSPCA*PKWGLCLYSCLLMK
Trigger: TTTCATAAGCAAACAGCTGTATAAACAAAGCCCCCATTTTGGTCAAGCACAGGGTGAATGTGATATTGTTCCCACAACCTTATTCTCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CCA 90 bp TGGACAGCTGCACTGTCACCTGAAGGCGGCCTCTTCCCCAAAGCCAGGCGGCTGTGGCGAGGGGGCAGCTaGGGACGGTCAGTGTCACCG +
Preference number: 2 (lower is better)
Translates to: WTAALSPEGGLFPKARRLWRGGS*GRSVSP
Trigger: CGGTGACACTGACCGTCCCCAGCTGCCCCCTCGCCA...CAGCCGCCTGGCTTTGGGGAAGAGGCCGCCTTCAGGTGACAGTGCAGCTGTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CCA 90 bp TGGACAGCTGCACTGTCACCTGAAGGCGGCCTCTTCCCCAAAGCCAGGCGGCTGAGAGCCTGTCTTCCCTaGCCCAGGGCTGGTGCTCTT +
Preference number: 2 (lower is better)
Translates to: WTAALSPEGGLFPKARRLRACLP*PRAGAL
Trigger: AAGAGCACCAGCCCTGGGCCAGGGAAGACAGGCTCT...CAGCCGCCTGGCTTTGGGGAAGAGGCCGCCTTCAGGTGACAGTGCAGCTGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CCA 90 bp TGGACAGCTGCACTGTCACCTGAAGGCGGCCTCTTCCCCAAAGCCAGGCGGCTGCGACCAGGCAGTCTCTaGCCAGCAACAGGGACTGCT +
Preference number: 2 (lower is better)
Translates to: WTAALSPEGGLFPKARRLRPGSL*PATGTA
Trigger: AGCAGTCCCTGTTGCTGGCCAGAGACTGCCTGGTCG...CAGCCGCCTGGCTTTGGGGAAGAGGCCGCCTTCAGGTGACAGTGCAGCTGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CAA 90 bp CTTCCCTGGCCCAGGGCTGGTGCTCTTGATGCGTTCTTGAGTTTCTaGCCCCCTGCCTCCACGGTGGCGGGTCTCCTGTCAGTTCCACGT +
Preference number: 2 (lower is better)
Translates to: LPWPRAGALDAFLSF*PPASTVAGLLSVPR
Trigger: ACGTGGAACTGACAGGAGACCCGCCACCGTGGAGGCAGGGGGCAAGAAACTCAAGAACGCATCAAGAGCACCAGCCCTGGGCCAGGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CAA 90 bp AGAGCCTGTCTTCCCTGGCCCAGGGCTGGTGCTCTTGATGCGTTCTaGAGTTTCTTGCCCCCTGCCTCCACGGTGGCGGGTCTCCTGTCA +
Preference number: 2 (lower is better)
Translates to: RACLPWPRAGALDAF*SFLPPASTVAGLLS
Trigger: TGACAGGAGACCCGCCACCGTGGAGGCAGGGGGCAAGAAACTCAAGAACGCATCAAGAGCACCAGCCCTGGGCCAGGGAAGACAGGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR TCA 90 bp TGGACAGCTGCACTGTCACCTGAAGGCGGCCTCTTCCCCAAAGCCAGGCGGCTGCTCCTTTTCCCACGGTaGCAGAAGGCAGTGCAGGCA +
Preference number: 2 (lower is better)
Translates to: WTAALSPEGGLFPKARRLLLFPR*QKAVQA
Trigger: TGCCTGCACTGCCTTCTGTCACCGTGGGAAAAGGAG...CAGCCGCCTGGCTTTGGGGAAGAGGCCGCCTTCAGGTGACAGTGCAGCTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CCA 90 bp GCTGAAAGGCAGGCGGGTCTGCGGGGTTTTTGTCTCCCTCAGCCTGGTTCAGTGACAGCTCTCCCTGGGTaGGTCTGCGAGCACTGCTGC +
Preference number: 2 (lower is better)
Translates to: AERQAGLRGFCLPQPGSVTALPG*VCEHCC
Trigger: GCAGCAGTGCTCGCAGACCCACCCAGGGAGAGCTGT...CACTGAACCAGGCTGAGGGAGACAAAAACCCCGCAGACCCGCCTGCCTTTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR GCA 90 bp TATTGCTCCCTTGTGGGTGGGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCGGAGGGGTCACGCTCTaGATCAGGCCGGTGTCCACG +
Preference number: 2 (lower is better)
Translates to: YCSLVGGRAEYLGRTHHSGGVTL*IRPVST
Trigger: CGTGGACACCGGCCTGATGCAGAGCGTGACCCCTCC...GCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CCA 90 bp GCTGAAAGGCAGGCGGGTCTGCGGGGTTTTTGTCTCCCTCAGCCTGGTTCAGTGCATCACAGCTCTCCCTaGGTGGGTCTGCGAGCACTG +
Preference number: 2 (lower is better)
Translates to: AERQAGLRGFCLPQPGSVHHSSP*VGLRAL
Trigger: CAGTGCTCGCAGACCCACCCAGGGAGAGCTGTGATG...CACTGAACCAGGCTGAGGGAGACAAAAACCCCGCAGACCCGCCTGCCTTTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CAA 90 bp CAGGCAGTCTCTGGCCAGCAACAGGGACTGCTCAAGTTACCGACGTaGGTAGGAGCTGGGCTCGCATGGCCAGAATGGAACCCCCTAGAC +
Preference number: 2 (lower is better)
Translates to: QAVSGQQQGLLKLPT*VGAGLAWPEWNPLD
Trigger: GTCTAGGGGGTTCCATTCTGGCCATGCGAGCCCAGCTCCTACCAACGTCGGTAACTTGAGCAGTCCCTGTTGCTGGCCAGAGACTGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CAA 90 bp GGGTGGCTTCCCAGGAGGCAGTTAGAGGCAGCCCAGTTTAGGAGTTaGAGTGTAGCAGGTCAGCCCTGGCACCGGTGTCAGCCACTGTTC +
Preference number: 2 (lower is better)
Translates to: GWLPRRQLEAAQFRS*SVAGQPWHRCQPLF
Trigger: GAACAGTGGCTGACACCGGTGCCAGGGCTGACCTGCTACACTCAAACTCCTAAACTGGGCTGCCTCTAACTGCCTCCTGGGAAGCCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR TCA 90 bp TGGACAGCTGCACTGTCACCTGAAGGCGGCCTCTTCCCCAAAGCCAGGCGGCTGCTCTTGATGCGTTCTTaGGTTTCTTGCCCCCTGCCT +
Preference number: 2 (lower is better)
Translates to: WTAALSPEGGLFPKARRLLLMRS*VSCPLP
Trigger: AGGCAGGGGGCAAGAAACTCAAGAACGCATCAAGAG...CAGCCGCCTGGCTTTGGGGAAGAGGCCGCCTTCAGGTGACAGTGCAGCTGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR TCA 90 bp GCTGAAAGGCAGGCGGGTCTGCGGGGTTTTTGTCTCCCTCAGCCTGGTTCAGTGCACCAAGTCCAACCGTaGGCACAGTGCCTCTGCGAA +
Preference number: 2 (lower is better)
Translates to: AERQAGLRGFCLPQPGSVHQVQP*AQCLCE
Trigger: TTCGCAGAGGCACTGTGCTCACGGTTGGACTTGGTG...CACTGAACCAGGCTGAGGGAGACAAAAACCCCGCAGACCCGCCTGCCTTTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR GCA 90 bp TATTGCTCCCTTGTGGGTGGGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCCTGCCCTCGAGAGCTTaGTCCACTCGACCGAAGGGC +
Preference number: 2 (lower is better)
Translates to: YCSLVGGRAEYLGRTHHSLPSRA*STRPKG
Trigger: GCCCTTCGGTCGAGTGGAGCAAGCTCTCGAGGGCAG...GCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CCA 90 bp TGTGTGGGTGGAGGTGGGGGAGTCGTCAGTCTTATGATGAGTCTCTTCTGCTGGCCCCTGCCTCCACGGTaGCGGGTCTCCTGTCAGTTC +
Preference number: 2 (lower is better)
Translates to: CVGGGGGVVSLMMSLFCWPLPPR*RVSCQF
Trigger: GAACTGACAGGAGACCCGCCACCGTGGAGGCAGGGG...CCAGCAGAAGAGACTCATCATAAGACTGACGACTCCCCCACCTCCACCCACACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CCA 90 bp GCTGAAAGGCAGGCGGGTCTGCGGGGTTTTTGTCTCCCTCAGCCTGGTTCAGTGGACGTTGGTAGGAGCTaGGCTCGCATGGCCAGAATG +
Preference number: 2 (lower is better)
Translates to: AERQAGLRGFCLPQPGSVDVGRS*ARMARM
Trigger: CATTCTGGCCATGCGAGCCCAGCTCCTACCAACGTC...CACTGAACCAGGCTGAGGGAGACAAAAACCCCGCAGACCCGCCTGCCTTTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CCA 90 bp TATTGCTCCCTTGTGGGTGGGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCACCCATGGTGAGCGCTaGCGACCAGGCAGTCTCTGG +
Preference number: 2 (lower is better)
Translates to: YCSLVGGRAEYLGRTHHSTHGER*RPGSLW
Trigger: CCAGAGACTGCCTGGTCGCCAGCGCTCACCATGGGT...GCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CAA 90 bp AGGCTGGAGGACCCCAAAAAGGAGCGCCACTCACTCACTGTGTCCTaGCATCCTCAACTGCCCGCATGTCTCCAGAGGCTGCTTAGTGCC +
Preference number: 2 (lower is better)
Translates to: RLEDPKKERHSLTVS*HPQLPACLQRLLSA
Trigger: GGCACTAAGCAGCCTCTGGAGACATGCGGGCAGTTGAGGATGCAAGGACACAGTGAGTGAGTGGCGCTCCTTTTTGGGGTCCTCCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR TCA 90 bp GGGCTCGCATGGCCAGAATGGAACCCCCTAGACTTTCCACACGTCACCTGCCTGGCTTCCGAATGGAGATaGAGGCGGTTTCTGGGGTCA +
Preference number: 2 (lower is better)
Translates to: GLAWPEWNPLDFPHVTCLASEWR*RRFLGS
Trigger: TGACCCCAGAAACCGCCTTCATCTCCATTCGGAAGC...CAGGCAGGTGACGTGTGGAAAGTCTAGGGGGTTCCATTCTGGCCATGCGAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR TCA 90 bp TGGACAGCTGCACTGTCACCTGAAGGCGGCCTCTTCCCCAAAGCCAGGCGGCTGCAGGGCTGGTGCTCTTaGTGCGTTCTTGAGTTTCTT +
Preference number: 2 (lower is better)
Translates to: WTAALSPEGGLFPKARRLQGWCS*CVLEFL
Trigger: AAGAAACTCAAGAACGCATCAAGAGCACCAGCCCTG...CAGCCGCCTGGCTTTGGGGAAGAGGCCGCCTTCAGGTGACAGTGCAGCTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR TCA 90 bp TGGACAGCTGCACTGTCACCTGAAGGCGGCCTCTTCCCCAAAGCCAGGCGGCTGGCCTTAGTTTCTGGCTaGTCACCTAATCACTCTGGA +
Preference number: 2 (lower is better)
Translates to: WTAALSPEGGLFPKARRLALVSG*SPNHSG
Trigger: TCCAGAGTGATTAGGTGATCAGCCAGAAACTAAGGC...CAGCCGCCTGGCTTTGGGGAAGAGGCCGCCTTCAGGTGACAGTGCAGCTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR GCA 90 bp TGGGCCCCCTCTTCCTGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGGCCAGCAACAGGGACTaGTCAAGTTACCGACGTTGG +
Preference number: 2 (lower is better)
Translates to: WAPSSCRANMLFALQGPVASNRD*SSYRRW
Trigger: CCAACGTCGGTAACTTGAGCAGTCCCTGTTGCTGGC...CACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACAGGAAGAGGGGGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR GCA 90 bp GCTGAAAGGCAGGCGGGTCTGCGGGGTTTTTGTCTCCCTCAGCCTGGTTCAGTGCCTGTCGGGCTAACATaGTGTTTGCCTTACAGGGAC +
Preference number: 2 (lower is better)
Translates to: AERQAGLRGFCLPQPGSVPVGLT*CLPYRD
Trigger: GTCCCTGTAAGGCAAACAGCATGTTAGCCCGACAGG...CACTGAACCAGGCTGAGGGAGACAAAAACCCCGCAGACCCGCCTGCCTTTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CCA 90 bp GCTGAAAGGCAGGCGGGTCTGCGGGGTTTTTGTCTCCCTCAGCCTGGTTCAGTGCTCGCATGGCCAGAATaGAACCCCCTAGACTTTCCA +
Preference number: 2 (lower is better)
Translates to: AERQAGLRGFCLPQPGSVLAWPE*NPLDFP
Trigger: TGGAAAGTCTAGGGGGTTCCATTCTGGCCATGCGAG...CACTGAACCAGGCTGAGGGAGACAAAAACCCCGCAGACCCGCCTGCCTTTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CAA 90 bp GCCTGCAGTGGTGGCCTGATGCCGTGCGATGCGGCCCCTTGGCAATaGAGGAAGGGGGTGTTCTGTAGGAAACTGCTGTATTGTAACTTG +
Preference number: 2 (lower is better)
Translates to: ACSGGLMPCDAAPWQ*RKGVFCRKLLYCNL
Trigger: CAAGTTACAATACAGCAGTTTCCTACAGAACACCCCCTTCCTCAATTGCCAAGGGGCCGCATCGCACGGCATCAGGCCACCACTGCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR TCA 90 bp GCTGAAAGGCAGGCGGGTCTGCGGGGTTTTTGTCTCCCTCAGCCTGGTTCAGTGTCCCTGCCTGTACAATaGCTCCAACTTACGAGCTTC +
Preference number: 2 (lower is better)
Translates to: AERQAGLRGFCLPQPGSVSLPVQ*LQLTSF
Trigger: GAAGCTCGTAAGTTGGAGTCATTGTACAGGCAGGGA...CACTGAACCAGGCTGAGGGAGACAAAAACCCCGCAGACCCGCCTGCCTTTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR GCA 90 bp TGGACAGCTGCACTGTCACCTGAAGGCGGCCTCTTCCCCAAAGCCAGGCGGCTGGACCAGTGTATCAGTTaGGTGGAGATACTAGAGACA +
Preference number: 2 (lower is better)
Translates to: WTAALSPEGGLFPKARRLDQCIS*VEILET
Trigger: TGTCTCTAGTATCTCCACGCAACTGATACACTGGTC...CAGCCGCCTGGCTTTGGGGAAGAGGCCGCCTTCAGGTGACAGTGCAGCTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR GCA 90 bp TATTGCTCCCTTGTGGGTGGGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCCTGCTTTCGTTCACCTaGCACCAAGGGCCAGACAAG +
Preference number: 2 (lower is better)
Translates to: YCSLVGGRAEYLGRTHHSLLSFT*HQGPDK
Trigger: CTTGTCTGGCCCTTGGTGGCAGGTGAACGAAAGCAG...GCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CCA 90 bp TATTGCTCCCTTGTGGGTGGGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCCCCTCTGATTCCAGTTaGGTGGCTCGATTTCTCCCC +
Preference number: 2 (lower is better)
Translates to: YCSLVGGRAEYLGRTHHSPSDSS*VARFLP
Trigger: GGGGAGAAATCGAGCCACCCAACTGGAATCAGAGGG...GCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CAA 90 bp ACCAGAGTTGGGAAGGGACACAAGAGGCAAGGGCTGGCTTCAGTCTaGGGCTCCTGTCTGTCCCAACCACTGACTCCAGCATACGGTTTA +
Preference number: 2 (lower is better)
Translates to: TRVGKGHKRQGLASV*GSCLSQPLTPAYGL
Trigger: TAAACCGTATGCTGGAGTCAGTGGTTGGGACAGACAGGAGCCCAAGACTGAAGCCAGCCCTTGCCTCTTGTGTCCCTTCCCAACTCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR TCA 90 bp TGGGCCCCCTCTTCCTGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGTTATTTAGTGGCCCCTaGAACACAGCTCATGCCCCA +
Preference number: 2 (lower is better)
Translates to: WAPSSCRANMLFALQGPVLFSGP*NTAHAP
Trigger: TGGGGCATGAGCTGTGTTTCAGGGGCCACTAAATAA...CACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACAGGAAGAGGGGGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR TCA 90 bp TGTGTGGGTGGAGGTGGGGGAGTCGTCAGTCTTATGATGAGTCTCTTCTGCTGGTGTCAGTTCCACGTGTaGCACCTCTGGAGTCCTGAG +
Preference number: 2 (lower is better)
Translates to: CVGGGGGVVSLMMSLFCWCQFHV*HLWSPE
Trigger: CTCAGGACTCCAGAGGTGTCACACGTGGAACTGACA...CCAGCAGAAGAGACTCATCATAAGACTGACGACTCCCCCACCTCCACCCACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR TCA 90 bp TGGGCCCCCTCTTCCTGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGCCATTCCTGCAGTTCTaGAATGAGTGGCCCCCATTT +
Preference number: 2 (lower is better)
Translates to: WAPSSCRANMLFALQGPVPFLQF*NEWPPF
Trigger: AAATGGGGGCCACTCATTTCAGAACTGCAGGAATGG...CACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACAGGAAGAGGGGGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR TCA 90 bp TGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAGATACTAGAGACACACCGCCGCTGCCGTGTGTaGCGGATCCTGATAGGCCTG +
Preference number: 2 (lower is better)
Translates to: CLPYRDQCISCVEILETHRRCRV*RILIGL
Trigger: CAGGCCTATCAGGATCCGTCACACACGGCAGCGGCG...GTGTGTCTCTAGTATCTCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CCA 90 bp TGGACAGCTGCACTGTCACCTGAAGGCGGCCTCTTCCCCAAAGCCAGGCGGCTGCCTTGTAGCAATATGTaGTTGCTCAGCTTCAGTGAA +
Preference number: 2 (lower is better)
Translates to: WTAALSPEGGLFPKARRLPCSNM*LLSFSE
Trigger: TTCACTGAAGCTGAGCAACCACATATTGCTACAAGG...CAGCCGCCTGGCTTTGGGGAAGAGGCCGCCTTCAGGTGACAGTGCAGCTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CAA 90 bp GAATGTCTTCTTAGGAACACATTTGTCAGTGCTGCCCTCGAGAGCTaGCTCCACTCGACCGAAGGGCAGGAGCCTCAGCCTACAACTATG +
Preference number: 2 (lower is better)
Translates to: ECLLRNTFVSAALES*LHSTEGQEPQPTTM
Trigger: CATAGTTGTAGGCTGAGGCTCCTGCCCTTCGGTCGAGTGGAGCAAGCTCTCGAGGGCAGCACTGACAAATGTGTTCCTAAGAAGACATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CCA 90 bp TATTGCTCCCTTGTGGGTGGGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCACATATTTACGAACCTaGGGCTTGACTAGAGGCTGG +
Preference number: 2 (lower is better)
Translates to: YCSLVGGRAEYLGRTHHSTYLRT*GLTRGW
Trigger: CCAGCCTCTAGTCAAGCCCCAGGTTCGTAAATATGT...GCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CAA 90 bp GAATGTGAAAGTGGGCCCCCTCTTCCTGTCGGGCTAACATGCTGTTaGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAGATACTAGAG +
Preference number: 2 (lower is better)
Translates to: ECESGPPLPVGLTCC*PYRDQCISCVEILE
Trigger: CTCTAGTATCTCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACAGGAAGAGGGGGCCCACTTTCACATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR GCA 90 bp TGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGACACATTTGTCAGTGCTaGCCTCGAGAGCTTGCTCCA +
Preference number: 2 (lower is better)
Translates to: CRANMLFALQGPVYQLRGHICQC*PRELAP
Trigger: TGGAGCAAGCTCTCGAGGGCAGCACTGACAAATGTG...TCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR GCA 90 bp TTTTATTTCTCAAACTGCAGTCCCCGAAGTGAAGCAAACCTTTCTCTCCACTTCGGTGGCCTGATGCCGTaGGATGCGGCCCCTTGGCAA +
Preference number: 2 (lower is better)
Translates to: FYFSNCSPRSEANLSLHFGGLMP*DAAPWQ
Trigger: TTGCCAAGGGGCCGCATCGCACGGCATCAGGCCACC...GAAGTGGAGAGAAAGGTTTGCTTCACTTCGGGGACTGCAGTTTGAGAAATAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CCA 90 bp TGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAGATACTAGAGACACACAGACAACAGGTACCCTaGAGACCGACTGCCCGCAAG +
Preference number: 2 (lower is better)
Translates to: CLPYRDQCISCVEILETHRQQVP*RPTARK
Trigger: CTTGCGGGCAGTCGGTCTCCAGGGTACCTGTTGTCT...GTGTGTCTCTAGTATCTCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CAA 90 bp TGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGTATCAGTaGCGTGGAGATACTAGAGACACACTTGCCCAGCTGGGAATTGCA +
Preference number: 2 (lower is better)
Translates to: CRANMLFALQGPVYQ*RGDTRDTLAQLGIA
Trigger: TGCAATTCCCAGCTGGGCAAGTGTGTCTCTAGTATCTCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR TCA 90 bp GCTGAAAGGCAGGCGGGTCTGCGGGGTTTTTGTCTCCCTCAGCCTGGTTCAGTGGTTGCTCAGCTTCAGTaGAAAATATATTGCCTTTTC +
Preference number: 2 (lower is better)
Translates to: AERQAGLRGFCLPQPGSVVAQLQ*KIYCLF
Trigger: GAAAAGGCAATATATTTTTCACTGAAGCTGAGCAAC...CACTGAACCAGGCTGAGGGAGACAAAAACCCCGCAGACCCGCCTGCCTTTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR TCA 90 bp AGTACCACACATATTGCACTTTTTGCCGAACGAAATTTTTACCTCACGTTCATCTCCTGGCACCCATGGTaGGCGCTGGCGACCAGGCAG +
Preference number: 2 (lower is better)
Translates to: STTHIALFAERNFYLTFISWHPW*ALATRQ
Trigger: CTGCCTGGTCGCCAGCGCTCACCATGGGTGCCAGGA...GATGAACGTGAGGTAAAAATTTCGTTCGGCAAAAAGTGCAATATGTGTGGTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR GCA 90 bp TGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAGAACACATTTGTCAGTaGTGCCCTCGAGAGCTTGCT +
Preference number: 2 (lower is better)
Translates to: CRANMLFALQGPVYQLRGEHICQ*CPRELA
Trigger: AGCAAGCTCTCGAGGGCAGCACTGACAAATGTGTTC...TCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CCA 90 bp CAAACCTTTCTCTCCACTTCTTTCCCCTTCAGAGATTTTGGTGAAGGCAGGTTTTGCGATGCGGCCCCTTaGCAATTGAGGAAGGGGGTG +
Preference number: 2 (lower is better)
Translates to: QTFLSTSFPFRDFGEGRFCDAAP*QLRKGV
Trigger: CACCCCCTTCCTCAATTGCCAAGGGGCCGCATCGCA...AAACCTGCCTTCACCAAAATCTCTGAAGGGGAAAGAAGTGGAGAGAAAGGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR TCA 90 bp CAAACCTTTCTCTCCACTTCTTTCCCCTTCAGAGATTTTGGTGAAGGCAGGTTTTGCCCCACTGCTTTGTaGTGGCCTTGGGGGACAACT +
Preference number: 2 (lower is better)
Translates to: QTFLSTSFPFRDFGEGRFCPTAL*WPWGTT
Trigger: AGTTGTCCCCCAAGGCCATCACAAAGCAGTGGGGCA...AAACCTGCCTTCACCAAAATCTCTGAAGGGGAAAGAAGTGGAGAGAAAGGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR TCA 90 bp TTTTATTTCTCAAACTGCAGTCCCCGAAGTGAAGCAAACCTTTCTCTCCACTTCACCCAGGGCACCTTCTaGAGGGGTGTGTCACCTGCT +
Preference number: 2 (lower is better)
Translates to: FYFSNCSPRSEANLSLHFTQGTF*RGVSPA
Trigger: AGCAGGTGACACACCCCTTCAGAAGGTGCCCTGGGT...GAAGTGGAGAGAAAGGTTTGCTTCACTTCGGGGACTGCAGTTTGAGAAATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR GCA 90 bp TTGCACTTTTTGCCGAACGAAATTTTTACCTCACGTTCATCTCACCAAAGTCTCACCCTGGAGACCGACTaGCCGCAAGCCAGCAGTGTC +
Preference number: 2 (lower is better)
Translates to: LHFLPNEIFTSRSSHQSLTLETD*PQASSV
Trigger: GACACTGCTGGCTTGCGGGCAGTCGGTCTCCAGGGT...GAGACTTTGGTGAGATGAACGTGAGGTAAAAATTTCGTTCGGCAAAAAGTGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR TCA 90 bp AGTACCACACATATTGCACTTTTTGCCGAACGAAATTTTTACCTCACGTTCATCCCCAGCCAGACCCTCTaGTTCCAGTTGGGTGGCTCG +
Preference number: 2 (lower is better)
Translates to: STTHIALFAERNFYLTFIPSQTL*FQLGGS
Trigger: CGAGCCACCCAACTGGAATCAGAGGGTCTGGCTGGG...GATGAACGTGAGGTAAAAATTTCGTTCGGCAAAAAGTGCAATATGTGTGGTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR GCA 90 bp TATTGCTCCCTTGTGGGTGGGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCGATGTCTTCTTGATTTaGCTTGTAGCAATATGTGGT +
Preference number: 2 (lower is better)
Translates to: YCSLVGGRAEYLGRTHHSDVFLI*LVAICG
Trigger: ACCACATATTGCTACAAGGCAAATCAAGAAGACATC...GCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR GCA 90 bp ATCACTCTGGAGCTGAGAATATCCTTCTCCCCACATCTAACCCGTGGGCAGAATAAGAGAGAAGGGGTTTaGTCAGATGGGCATGAACAG +
Preference number: 2 (lower is better)
Translates to: ITLELRISFSPHLTRGQNKREGV*SDGHEQ
Trigger: CTGTTCATGCCCATCTGAGCAAACCCCTTCTCTCTT...ATTCTGCCCACGGGTTAGATGTGGGGAGAAGGATATTCTCAGCTCCAGAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CCA 90 bp AAAGAATTAAAGCATGATCTGGGGGAAAGGCACCGCACTACCACTTCACATGGGGATGAAGGCGGTTTCTaGGGTCAGTACCAGCTGTTA +
Preference number: 2 (lower is better)
Translates to: KELKHDLGERHRTTTSHGDEGGF*GQYQLL
Trigger: TAACAGCTGGTACTGACCCCAGAAACCGCCTTCATC...CCCATGTGAAGTGGTAGTGCGGTGCCTTTCCCCCAGATCATGCTTTAATTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CCA 90 bp TTTTATTTCTCAAACTGCAGTCCCCGAAGTGAAGCAAACCTTTCTCTCCACTTCCAGTCCCTCATCGGCTaGCCTAACCGTCCTGCCATA +
Preference number: 2 (lower is better)
Translates to: FYFSNCSPRSEANLSLHFQSLIG*PNRPAI
Trigger: TATGGCAGGACGGTTAGGCCAGCCGATGAGGGACTG...GAAGTGGAGAGAAAGGTTTGCTTCACTTCGGGGACTGCAGTTTGAGAAATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CCA 90 bp TGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGACTCTCGATTTCTCTCTaGGTCCTTAACCTTCCAGTA +
Preference number: 2 (lower is better)
Translates to: CRANMLFALQGPVYQLRGLSISL*VLNLPV
Trigger: TACTGGAAGGTTAAGGACCCAGAGAGAAATCGAGAG...TCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CCA 90 bp CAAACCTTTCTCTCCACTTCTTTCCCCTTCAGAGATTTTGGTGAAGGCAGGTTTACAAGAGGCAAGGGCTaGCTTCAGTCTTGGGCTCCT +
Preference number: 2 (lower is better)
Translates to: QTFLSTSFPFRDFGEGRFTRGKG*LQSWAP
Trigger: AGGAGCCCAAGACTGAAGCCAGCCCTTGCCTCTTGT...AAACCTGCCTTCACCAAAATCTCTGAAGGGGAAAGAAGTGGAGAGAAAGGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CCA 90 bp TTTTATTTCTCAAACTGCAGTCCCCGAAGTGAAGCAAACCTTTCTCTCCACTTCAGCACTGCTGCCGCCTaGTTCTCTATCTGTGCCCCA +
Preference number: 2 (lower is better)
Translates to: FYFSNCSPRSEANLSLHFSTAAA*FSICAP
Trigger: TGGGGCACAGATAGAGAACCAGGCGGCAGCAGTGCT...GAAGTGGAGAGAAAGGTTTGCTTCACTTCGGGGACTGCAGTTTGAGAAATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR TCA 90 bp CAAACCTTTCTCTCCACTTCTTTCCCCTTCAGAGATTTTGGTGAAGGCAGGTTTCACACGTCACCTGCCTaGACGCTAACTACAAAGAGG +
Preference number: 2 (lower is better)
Translates to: QTFLSTSFPFRDFGEGRFHTSPA*TLTTKR
Trigger: CCTCTTTGTAGTTAGCGTTCAGGCAGGTGACGTGTG...AAACCTGCCTTCACCAAAATCTCTGAAGGGGAAAGAAGTGGAGAGAAAGGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR TCA 90 bp GAATCAGACTGGAAAGCAAGTCAGTACTTCAGAGTAGCCCCGCAGAAAAAGAGCCCTGCAGTTCTGAAATaGGTGGCCCCCATTTTCAAT +
Preference number: 2 (lower is better)
Translates to: ESDWKASQYFRVAPQKKSPAVLK*VAPIFN
Trigger: ATTGAAAATGGGGGCCACTCATTTCAGAACTGCAGG...GCTCTTTTTCTGCGGGGCTACTCTGAAGTACTGACTTGCTTTCCAGTCTGATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR TCA 90 bp ATCACTCTGGAGCTGAGAATATCCTTCTCCCCACATCTAACCCGTGGGCAGAATACACTTGGGAGTTCTTaGTATCTGAGGAAGAAAGGG +
Preference number: 2 (lower is better)
Translates to: ITLELRISFSPHLTRGQNTLGSS*YLRKKG
Trigger: CCCTTTCTTCCTCAGATATCAAGAACTCCCAAGTGT...ATTCTGCCCACGGGTTAGATGTGGGGAGAAGGATATTCTCAGCTCCAGAGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR GCA 90 bp CAAACCTTTCTCTCCACTTCTTTCCCCTTCAGAGATTTTGGTGAAGGCAGGTTTCACTCACTGTGTCCTTaGATCCTCAACTGCCCGCAT +
Preference number: 2 (lower is better)
Translates to: QTFLSTSFPFRDFGEGRFHSLCP*ILNCPH
Trigger: ATGCGGGCAGTTGAGGATGCAAGGACACAGTGAGTG...AAACCTGCCTTCACCAAAATCTCTGAAGGGGAAAGAAGTGGAGAGAAAGGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CCA 90 bp AAGTGCTTGGTAAAACTAATGTACAAATATAAGCTATTGCTCCCTTGTGGGTGGAGCCTCCCGAGTAGCTaGAACTACAGGCGCCCACCA +
Preference number: 2 (lower is better)
Translates to: KCLVKLMYKYKLLLPCGWSLPSS*NYRRPP
Trigger: TGGTGGGCGCCTGTAGTTCCAGCTACTCGGGAGGCT...CCACCCACAAGGGAGCAATAGCTTATATTTGTACATTAGTTTTACCAAGCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR TCA 90 bp TTTTATTTCTCAAACTGCAGTCCCCGAAGTGAAGCAAACCTTTCTCTCCACTTCAAGCCAGGCGGCTGTTaGGTGGAGAATAAGGTTGTG +
Preference number: 2 (lower is better)
Translates to: FYFSNCSPRSEANLSLHFKPGGC*VENKVV
Trigger: CACAACCTTATTCTCCACTCAACAGCCGCCTGGCTT...GAAGTGGAGAGAAAGGTTTGCTTCACTTCGGGGACTGCAGTTTGAGAAATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CAA 90 bp TCCCAACCACTGACTCCAGCATACGGTTTAAACACTTGGGAGTTCTaGATATCTGAGGAAGAAAGGGCCACTGACTTTTTCTTTCCTAGG +
Preference number: 2 (lower is better)
Translates to: SQPLTPAYGLNTWEF*ISEEERATDFFFPR
Trigger: CCTAGGAAAGAAAAAGTCAGTGGCCCTTTCTTCCTCAGATATCAAGAACTCCCAAGTGTTTAAACCGTATGCTGGAGTCAGTGGTTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR TCA 90 bp TGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAGATACTAGAGACACACGTGCATCTGATTTCCTaGTGTCTTCTTGATTTGCCT +
Preference number: 2 (lower is better)
Translates to: CLPYRDQCISCVEILETHVHLIS*CLLDLP
Trigger: AGGCAAATCAAGAAGACATCAGGAAATCAGATGCAC...GTGTGTCTCTAGTATCTCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR TCA 90 bp GAATCAGACTGGAAAGCAAGTCAGTACTTCAGAGTAGCCCCGCAGAAAAAGAGCGTGGAAAACAAACTCTaGAGTGACTTTGGATTTAGC +
Preference number: 2 (lower is better)
Translates to: ESDWKASQYFRVAPQKKSVENKL*SDFGFS
Trigger: GCTAAATCCAAAGTCACTTCAGAGTTTGTTTTCCAC...GCTCTTTTTCTGCGGGGCTACTCTGAAGTACTGACTTGCTTTCCAGTCTGATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR TCA 90 bp AAGTGCTTGGTAAAACTAATGTACAAATATAAGCTATTGCTCCCTTGTGGGTGGGAGGTTGCAGTGAGCTaGAATCACGCCACTGCATTC +
Preference number: 2 (lower is better)
Translates to: KCLVKLMYKYKLLLPCGWEVAVS*NHATAF
Trigger: GAATGCAGTGGCGTGATTTCAGCTCACTGCAACCTC...CCACCCACAAGGGAGCAATAGCTTATATTTGTACATTAGTTTTACCAAGCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR GCA 90 bp TTGCACTTTTTGCCGAACGAAATTTTTACCTCACGTTCATCTCACCAAAGTCTCAAGGGGTGTGTCACCTaGTTCCGAATGGAGATGAAG +
Preference number: 2 (lower is better)
Translates to: LHFLPNEIFTSRSSHQSLKGCVT*FRMEMK
Trigger: CTTCATCTCCATTCGGAAGCAGGTGACACACCCCTT...GAGACTTTGGTGAGATGAACGTGAGGTAAAAATTTCGTTCGGCAAAAAGTGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR GCA 90 bp AGTACCACACATATTGCACTTTTTGCCGAACGAAATTTTTACCTCACGTTCATCGTGTCCACGAGAAACTaGAGGAAGAGCCTGTCTTCC +
Preference number: 2 (lower is better)
Translates to: STTHIALFAERNFYLTFIVSTRN*RKSLSS
Trigger: GGAAGACAGGCTCTTCCTGCAGTTTCTCGTGGACAC...GATGAACGTGAGGTAAAAATTTCGTTCGGCAAAAAGTGCAATATGTGTGGTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR GCA 90 bp CAAACCTTTCTCTCCACTTCTTTCCCCTTCAGAGATTTTGGTGAAGGCAGGTTTTTTCCACACGTCACCTaGCTGAACGCTAACTACAAA +
Preference number: 2 (lower is better)
Translates to: QTFLSTSFPFRDFGEGRFFPHVT*LNANYK
Trigger: TTTGTAGTTAGCGTTCAGGCAGGTGACGTGTGGAAA...AAACCTGCCTTCACCAAAATCTCTGAAGGGGAAAGAAGTGGAGAGAAAGGTTTG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR GCA 90 bp AAGTGCTTGGTAAAACTAATGTACAAATATAAGCTATTGCTCCCTTGTGGGTGGCTGAAATCACGCCACTaGATTCCAGCCTGGGTGACA +
Preference number: 2 (lower is better)
Translates to: KCLVKLMYKYKLLLPCGWLKSRH*IPAWVT
Trigger: TGTCACCCAGGCTGGAATGCAGTGGCGTGATTTCAG...CCACCCACAAGGGAGCAATAGCTTATATTTGTACATTAGTTTTACCAAGCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CCA 90 bp AAGTGCTTGGTAAAACTAATGTACAAATATAAGCTATTGCTCCCTTGTGGGTGGCCACAGAAAACTTTGTaGTGGGGCAGAACCAGGAGG +
Preference number: 2 (lower is better)
Translates to: KCLVKLMYKYKLLLPCGWPQKTL*WGRTRR
Trigger: CCTCCTGGTTCTGCCCCACCACAAAGTTTTCTGTGG...CCACCCACAAGGGAGCAATAGCTTATATTTGTACATTAGTTTTACCAAGCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR GCA 90 bp GAATCAGACTGGAAAGCAAGTCAGTACTTCAGAGTAGCCCCGCAGAAAAAGAGCAAGGAAGATGCTTTGTaGTTAACACATTCATCTGCT +
Preference number: 2 (lower is better)
Translates to: ESDWKASQYFRVAPQKKSKEDAL*LTHSSA
Trigger: AGCAGATGAATGTGTTAAGCACAAAGCATCTTCCTT...GCTCTTTTTCTGCGGGGCTACTCTGAAGTACTGACTTGCTTTCCAGTCTGATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CAA 90 bp AAACACCTGACTGACCAACAGAACCAGTCTCCTCAGCAGCTTACATaGCAGTCAATACAGAGGGTTATGGAATTTATTGATTTCTGCTTG +
Preference number: 2 (lower is better)
Translates to: KHLTDQQNQSPQQLT*QSIQRVMEFIDFCL
Trigger: CAAGCAGAAATCAATAAATTCCATAACCCTCTGTATTGACTGCAATGTAAGCTGCTGAGGAGACTGGTTCTGTTGGTCAGTCAGGTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CAA 90 bp CAATTGAGGAAGGGGGTGTTCTGTAGGAAACTGCTGTATTGTAACTaGGAAAAACTAGACATCTTTGAGGTGAGCCTAAACTTCTGCAGT +
Preference number: 2 (lower is better)
Translates to: QLRKGVFCRKLLYCN*EKLDIFEVSLNFCS
Trigger: ACTGCAGAAGTTTAGGCTCACCTCAAAGATGTCTAGTTTTTCCAAGTTACAATACAGCAGTTTCCTACAGAACACCCCCTTCCTCAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR TCA 90 bp AAGTGCTTGGTAAAACTAATGTACAAATATAAGCTATTGCTCCCTTGTGGGTGGGAAAGAATTAAAGCATaGTCTGGGGGAAAGGCACCG +
Preference number: 2 (lower is better)
Translates to: KCLVKLMYKYKLLLPCGWERIKA*SGGKAP
Trigger: CGGTGCCTTTCCCCCAGATCATGCTTTAATTCTTTC...CCACCCACAAGGGAGCAATAGCTTATATTTGTACATTAGTTTTACCAAGCACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR TCA 90 bp AAGTGCTTGGTAAAACTAATGTACAAATATAAGCTATTGCTCCCTTGTGGGTGGTACACACTGCTAACGTaGATCAGACTGGAAAGCAAG +
Preference number: 2 (lower is better)
Translates to: KCLVKLMYKYKLLLPCGWYTLLT*IRLESK
Trigger: CTTGCTTTCCAGTCTGATTCACGTTAGCAGTGTGTA...CCACCCACAAGGGAGCAATAGCTTATATTTGTACATTAGTTTTACCAAGCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR GCA 90 bp TTTTATTTCTCAAACTGCAGTCCCCGAAGTGAAGCAAACCTTTCTCTCCACTTCTTTCCCCCATATATATaGAATAGCACACACCCTTTC +
Preference number: 2 (lower is better)
Translates to: FYFSNCSPRSEANLSLHFFPPYI*NSTHPF
Trigger: GAAAGGGTGTGTGCTATTGCATATATATGGGGGAAA...GAAGTGGAGAGAAAGGTTTGCTTCACTTCGGGGACTGCAGTTTGAGAAATAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CCA 90 bp AAGTGCTTGGTAAAACTAATGTACAAATATAAGCTATTGCTCCCTTGTGGGTGGGAAGAGAAAACTGCTTaGAAGCTTCCATGGGTCACT +
Preference number: 2 (lower is better)
Translates to: KCLVKLMYKYKLLLPCGWEEKTA*KLPWVT
Trigger: AGTGACCCATGGAAGCTTCCAAGCAGTTTTCTCTTC...CCACCCACAAGGGAGCAATAGCTTATATTTGTACATTAGTTTTACCAAGCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CAA 90 bp ATCCAGCAAAACCACCCACCTCCCTTCAGATATAAGCAAATAATCTaGCCCTTTCTACAAAGTGCAGATATCTCTGTATCCCTTTTATTT +
Preference number: 2 (lower is better)
Translates to: IQQNHPPPFRYKQII*PFLQSADISVSLLF
Trigger: AAATAAAAGGGATACAGAGATATCTGCACTTTGTAGAAAGGGCAAGATTATTTGCTTATATCTGAAGGGAGGTGGGTGGTTTTGCTGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CCA 90 bp AGTACCACACATATTGCACTTTTTGCCGAACGAAATTTTTACCTCACGTTCATCGATGATCTGCTTAAATaGTTAACACATCTGTGGTTC +
Preference number: 2 (lower is better)
Translates to: STTHIALFAERNFYLTFIDDLLK*LTHLWF
Trigger: GAACCACAGATGTGTTAACCATTTAAGCAGATCATC...GATGAACGTGAGGTAAAAATTTCGTTCGGCAAAAAGTGCAATATGTGTGGTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR TCA 72 bp GCACAGTGCCTCTGCGAAGCATCCTGGCACCCATGGTaGGCGCTGGCGACCAGGCAGTCTCTGGCCAGCAAC +
Preference number: 3 (lower is better)
Translates to: AQCLCEASWHPW*ALATRQSLASN
Trigger: GTTGCTGGCCAGAGACTGCCTGGTCGCCAGCGCTCACCATGGGTGCCAGGATGCTTCGCAGAGGCACTGTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR TCA 72 bp TCTGCATCAGGCCGGTGTCCACGCCGCTGCCGTGTGTaGCGGATCCTGATAGGCCTGGCTGCTGTAGGGCAC +
Preference number: 3 (lower is better)
Translates to: SASGRCPRRCRV*RILIGLAAVGH
Trigger: GTGCCCTACAGCAGCCAGGCCTATCAGGATCCGTCACACACGGCAGCGGCGTGGACACCGGCCTGATGCAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR GCA 72 bp CTTACAACACAGGTCCCAGCAGGAGGGGTCACGCTCTaGATCAGGCCGGTGTCCACGCCGCTGCCGTGTGTG +
Preference number: 3 (lower is better)
Translates to: LTTQVPAGGVTL*IRPVSTPLPCV
Trigger: CACACACGGCAGCGGCGTGGACACCGGCCTGATGCAGAGCGTGACCCCTCCTGCTGGGACCTGTGTTGTAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CCA 72 bp GCCTCTGCGAAGCATCCTGGCACCCATGGTGAGCGCTaGCGACCAGGCAGTCTCTGGCCAGCAACAGGGACT +
Preference number: 3 (lower is better)
Translates to: ASAKHPGTHGER*RPGSLWPATGT
Trigger: AGTCCCTGTTGCTGGCCAGAGACTGCCTGGTCGCCAGCGCTCACCATGGGTGCCAGGATGCTTCGCAGAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR GCA 72 bp CCCATCACAGCTCTCCCTGGGTGGGTCTGCGAGCACTaGTGCCGCCTGGTTCTCTATCTGTGCCCCAGTGTG +
Preference number: 3 (lower is better)
Translates to: PITALPGWVCEH*CRLVLYLCPSV
Trigger: CACACTGGGGCACAGATAGAGAACCAGGCGGCAGCAGTGCTCGCAGACCCACCCAGGGAGAGCTGTGATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR GCA 72 bp TCTGCTGGCCTGCAGTGGTGGCCTGATGCCGTGCGATaGGGCCCCTTGGCAATTGAGGAAGGGGGTGTTCTG +
Preference number: 3 (lower is better)
Translates to: SAGLQWWPDAVR*GPLAIEEGGVL
Trigger: CAGAACACCCCCTTCCTCAATTGCCAAGGGGCCGCATCGCACGGCATCAGGCCACCACTGCAGGCCAGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR GCA 72 bp TGGAATCTGCTGGCCTGCAGTGGTGGCCTGATGCCGTaGGATGCGGCCCCTTGGCAATTGAGGAAGGGGGTG +
Preference number: 3 (lower is better)
Translates to: WNLLACSGGLMP*DAAPWQLRKGV
Trigger: CACCCCCTTCCTCAATTGCCAAGGGGCCGCATCGCACGGCATCAGGCCACCACTGCAGGCCAGCAGATTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CCA 72 bp GCAGGCGGGTCTGCGGGGTTTTTGTCTCCCTCAGCCTaGTTCAGTGCACGGCCACCTGGACAGCTGCACTGT +
Preference number: 3 (lower is better)
Translates to: AGGSAGFLSPSA*FSARPPGQLHC
Trigger: ACAGTGCAGCTGTCCAGGTGGCCGTGCACTGAACCAGGCTGAGGGAGACAAAAACCCCGCAGACCCGCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CCA 72 bp GCAGAGTATCTGGGCAGAACCCATCACAGCTCTCCCTaGGTGGGTCTGCGAGCACTGCTGCCGCCTGGTTCT +
Preference number: 3 (lower is better)
Translates to: AEYLGRTHHSSP*VGLRALLPPGS
Trigger: AGAACCAGGCGGCAGCAGTGCTCGCAGACCCACCCAGGGAGAGCTGTGATGGGTTCTGCCCAGATACTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CAA 90 bp TGGACAGCTGCACTGTCACCTGAAGGCGGCCTCTTCCCCAAAGCCAGGCGGCTGGCCCAGTTTAGGAGTTaGAGTGTAGCAGGTCAGCCC +
Preference number: 3 (lower is better)
Translates to: WTAALSPEGGLFPKARRLAQFRS*SVAGQP
Trigger: GGGCTGACCTGCTACACTCAAACTCCTAAACTGGGC...CAGCCGCCTGGCTTTGGGGAAGAGGCCGCCTTCAGGTGACAGTGCAGCTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR GCA 72 bp CCGCTGCCGTGTGTGACGGATCCTGATAGGCCTGGCTaGTGTAGGGCACCTCTCGATTTCTCTCTGGGTCCT +
Preference number: 3 (lower is better)
Translates to: PLPCVTDPDRPG*CRAPLDFSLGP
Trigger: AGGACCCAGAGAGAAATCGAGAGGTGCCCTACAGCAGCCAGGCCTATCAGGATCCGTCACACACGGCAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CCA 72 bp CCGACGTTGGTAGGAGCTGGGCTCGCATGGCCAGAATaGAACCCCCTAGACTTTCCACACGTCACCTGCCTG +
Preference number: 3 (lower is better)
Translates to: PTLVGAGLAWPE*NPLDFPHVTCL
Trigger: CAGGCAGGTGACGTGTGGAAAGTCTAGGGGGTTCCATTCTGGCCATGCGAGCCCAGCTCCTACCAACGTCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CCA 72 bp GCTATTGCTCCCTTGTGGGTGGGCGAGCAGAGTATCTaGGCAGAACCCATCACAGCTCTCCCTGGGTGGGTC +
Preference number: 3 (lower is better)
Translates to: AIAPLWVGEQSI*AEPITALPGWV
Trigger: GACCCACCCAGGGAGAGCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR GCA 72 bp CCTTGCATCCTCAACTGCCCGCATGTCTCCAGAGGCTaGTTAGTGCCCACACGCCTGGGACCAACTGTGACT +
Preference number: 3 (lower is better)
Translates to: PCILNCPHVSRG*LVPTRLGPTVT
Trigger: AGTCACAGTTGGTCCCAGGCGTGTGGGCACTAAGCAGCCTCTGGAGACATGCGGGCAGTTGAGGATGCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CCA 72 bp GCAACATCCACCCCAGCCAGACCCTCTGATTCCAGTTaGGTGGCTCGATTTCTCCCCGTTAGGGAGAGGGCA +
Preference number: 3 (lower is better)
Translates to: ATSTPARPSDSS*VARFLPVRERA
Trigger: TGCCCTCTCCCTAACGGGGAGAAATCGAGCCACCCAACTGGAATCAGAGGGTCTGGCTGGGGTGGATGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CCA 72 bp GCACCAGAGTTGGGAAGGGACACAAGAGGCAAGGGCTaGCTTCAGTCTTGGGCTCCTGTCTGTCCCAACCAC +
Preference number: 3 (lower is better)
Translates to: APELGRDTRGKG*LQSWAPVCPNH
Trigger: GTGGTTGGGACAGACAGGAGCCCAAGACTGAAGCCAGCCCTTGCCTCTTGTGTCCCTTCCCAACTCTGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CCA 72 bp AGTATCTGGGCAGAACCCATCACAGCTCTCCCTGGGTaGGTCTGCGAGCACTGCTGCCGCCTGGTTCTCTAT +
Preference number: 3 (lower is better)
Translates to: SIWAEPITALPG*VCEHCCRLVLY
Trigger: ATAGAGAACCAGGCGGCAGCAGTGCTCGCAGACCCACCCAGGGAGAGCTGTGATGGGTTCTGCCCAGATACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CCA 72 bp TGCAGTGGTGGCCTGATGCCGTGCGATGCGGCCCCTTaGCAATTGAGGAAGGGGGTGTTCTGTAGGAAACTG +
Preference number: 3 (lower is better)
Translates to: CSGGLMPCDAAP*QLRKGVFCRKL
Trigger: CAGTTTCCTACAGAACACCCCCTTCCTCAATTGCCAAGGGGCCGCATCGCACGGCATCAGGCCACCACTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CAA 90 bp TGTGTGGGTGGAGGTGGGGGAGTCGTCAGTCTTATGATGAGTCTCTTCTGCTGGGCGTTCTTGAGTTTCTaGCCCCCTGCCTCCACGGTG +
Preference number: 3 (lower is better)
Translates to: CVGGGGGVVSLMMSLFCWAFLSF*PPASTV
Trigger: CACCGTGGAGGCAGGGGGCAAGAAACTCAAGAACGC...CCAGCAGAAGAGACTCATCATAAGACTGACGACTCCCCCACCTCCACCCACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR GCA 72 bp CCCACACGCCTGGGACCAACTGTGACTCCAGGCTGCTaGTTGTCACCTTGCCTTAGTTTCTGGCTGATCACC +
Preference number: 3 (lower is better)
Translates to: PTRLGPTVTPGC*LSPCLSFWLIT
Trigger: GGTGATCAGCCAGAAACTAAGGCAAGGTGACAAGCAGCAGCCTGGAGTCACAGTTGGTCCCAGGCGTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR GCA 72 bp GTGCCCACACGCCTGGGACCAACTGTGACTCCAGGCTaGTGCTTGTCACCTTGCCTTAGTTTCTGGCTGATC +
Preference number: 3 (lower is better)
Translates to: VPTRLGPTVTPG*CLSPCLSFWLI
Trigger: GATCAGCCAGAAACTAAGGCAAGGTGACAAGCAGCAGCCTGGAGTCACAGTTGGTCCCAGGCGTGTGGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR GCA 72 bp AGCGCCACTCACTCACTGTGTCCTTGCATCCTCAACTaGCCGCATGTCTCCAGAGGCTGCTTAGTGCCCACA +
Preference number: 3 (lower is better)
Translates to: SATHSLCPCILN*PHVSRGCLVPT
Trigger: TGTGGGCACTAAGCAGCCTCTGGAGACATGCGGGCAGTTGAGGATGCAAGGACACAGTGAGTGAGTGGCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR GCA 72 bp ACCCCAAAAAGGAGCGCCACTCACTCACTGTGTCCTTaGATCCTCAACTGCCCGCATGTCTCCAGAGGCTGC +
Preference number: 3 (lower is better)
Translates to: TPKRSATHSLCP*ILNCPHVSRGC
Trigger: GCAGCCTCTGGAGACATGCGGGCAGTTGAGGATGCAAGGACACAGTGAGTGAGTGGCGCTCCTTTTTGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CCA 72 bp GGCCTGGCTGCTGTAGGGCACCTCTCGATTTCTCTCTaGGTCCTTAACCTTCCAGTAGCCTCTCTGCAGTCC +
Preference number: 3 (lower is better)
Translates to: GLAAVGHLSISL*VLNLPVASLQS
Trigger: GGACTGCAGAGAGGCTACTGGAAGGTTAAGGACCCAGAGAGAAATCGAGAGGTGCCCTACAGCAGCCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CCA 72 bp GCCCAGTTTAGGAGTTTGAGTGTAGCAGGTCAGCCCTaGCACCGGTGTCAGCCACTGTTCACAGGGACTGAG +
Preference number: 3 (lower is better)
Translates to: AQFRSLSVAGQP*HRCQPLFTGTE
Trigger: CTCAGTCCCTGTGAACAGTGGCTGACACCGGTGCCAGGGCTGACCTGCTACACTCAAACTCCTAAACTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR GCA 72 bp TTAGGAACACATTTGTCAGTGCTGCCCTCGAGAGCTTaGTCCACTCGACCGAAGGGCAGGAGCCTCAGCCTA +
Preference number: 3 (lower is better)
Translates to: LGTHLSVLPSRA*STRPKGRSLSL
Trigger: TAGGCTGAGGCTCCTGCCCTTCGGTCGAGTGGAGCAAGCTCTCGAGGGCAGCACTGACAAATGTGTTCCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR GCA 72 bp GGTGGGGGAGTCGTCAGTCTTATGATGAGTCTCTTCTaGTGGAGACTTTGGTCCACGAGAGAGGGTAGGGGG +
Preference number: 3 (lower is better)
Translates to: GGGVVSLMMSLF*WRLWSTREGRG
Trigger: CCCCCTACCCTCTCTCGTGGACCAAAGTCTCCAGCAGAAGAGACTCATCATAAGACTGACGACTCCCCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR GCA 72 bp GAATGTGAGAGGCTACTGGAAGGTGAGAGGCTCCACTaGTTTCGTTCACCTGCCACCAAGGGCCAGACAAGG +
Preference number: 3 (lower is better)
Translates to: ECERLLEGERLH*FRSPATKGQTR
Trigger: CCTTGTCTGGCCCTTGGTGGCAGGTGAACGAAAGCAGTGGAGCCTCTCACCTTCCAGTAGCCTCTCACATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CCA 72 bp ACAGGGACTGCTCAAGTTACCGACGTTGGTAGGAGCTaGGCTCGCATGGCCAGAATGGAACCCCCTAGACTT +
Preference number: 3 (lower is better)
Translates to: TGTAQVTDVGRS*ARMARMEPPRL
Trigger: AAGTCTAGGGGGTTCCATTCTGGCCATGCGAGCCCAGCTCCTACCAACGTCGGTAACTTGAGCAGTCCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CAA 90 bp GAATCAGACTGGAAAGCAAGTCAGTACTTCAGAGTAGCCCCGCAGAAAAAGAGCGCTGCCCTCGAGAGCTaGCTCCACTCGACCGAAGGG +
Preference number: 3 (lower is better)
Translates to: ESDWKASQYFRVAPQKKSAALES*LHSTEG
Trigger: CCCTTCGGTCGAGTGGAGCAAGCTCTCGAGGGCAGC...GCTCTTTTTCTGCGGGGCTACTCTGAAGTACTGACTTGCTTTCCAGTCTGATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CAA 90 bp GGGCTCGCATGGCCAGAATGGAACCCCCTAGACTTTCCACACGTCACCTGCCTGTTCTTAGGAACACATTaGTCAGTGCTGCCCTCGAGA +
Preference number: 3 (lower is better)
Translates to: GLAWPEWNPLDFPHVTCLFLGTH*SVLPSR
Trigger: TCTCGAGGGCAGCACTGACAAATGTGTTCCTAAGAA...CAGGCAGGTGACGTGTGGAAAGTCTAGGGGGTTCCATTCTGGCCATGCGAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR TCA 72 bp CTGTGCCCCAGTGTGTGCCTGAGTCTGCTGATAGGTTaGAACCTGCCTGGAGAAGATGTGGACACAAGGTGG +
Preference number: 3 (lower is better)
Translates to: LCPSVCLSLLIG*NLPGEDVDTRW
Trigger: CCACCTTGTGTCCACATCTTCTCCAGGCAGGTTTCAACCTATCAGCAGACTCAGGCACACACTGGGGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CCA 72 bp CCTGATGCTCTCCCACGCAGGGATTCTCAAGGTGGATaGTGTAGAGAACCATCAGCCTCCTTTTCCCACGGT +
Preference number: 3 (lower is better)
Translates to: PDALPRRDSQGG*CREPSASFSHG
Trigger: ACCGTGGGAAAAGGAGGCTGATGGTTCTCTACACCATCCACCTTGAGAATCCCTGCGTGGGAGAGCATCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CAA 90 bp TGGACAGCTGCACTGTCACCTGAAGGCGGCCTCTTCCCCAAAGCCAGGCGGCTGTGTAGCAATATGTGGTaGCTCAGCTTCAGTGAAAAA +
Preference number: 3 (lower is better)
Translates to: WTAALSPEGGLFPKARRLCSNMW*LSFSEK
Trigger: TTTTTCACTGAAGCTGAGCAACCACATATTGCTACA...CAGCCGCCTGGCTTTGGGGAAGAGGCCGCCTTCAGGTGACAGTGCAGCTGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR TCA 72 bp TTCGTTCACCTGCCACCAAGGGCCAGACAAGGGCTCTaGCATTACAGGTGCTTCAGACCACACTGTAGAACC +
Preference number: 3 (lower is better)
Translates to: FVHLPPRARQGL*HYRCFRPHCRT
Trigger: GGTTCTACAGTGTGGTCTGAAGCACCTGTAATGTCAGAGCCCTTGTCTGGCCCTTGGTGGCAGGTGAACGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR GCA 72 bp TGTGAAAGTGGGCCCCCTCTTCCTGTCGGGCTAACATaGTGTTTGCCTTACAGGGACCAGTGTATCAGTTGC +
Preference number: 3 (lower is better)
Translates to: CESGPPLPVGLT*CLPYRDQCISC
Trigger: GCAACTGATACACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACAGGAAGAGGGGGCCCACTTTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CCA 72 bp GTAGTTATTACATCGGAAAAGAGACAACAGGTACCCTaGAGACCGACTGCCCGCAAGCCAGCAGTGTCCACG +
Preference number: 3 (lower is better)
Translates to: VVITSEKRQQVP*RPTARKPAVST
Trigger: CGTGGACACTGCTGGCTTGCGGGCAGTCGGTCTCCAGGGTACCTGTTGTCTCTTTTCCGATGTAATAACTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR TCA 72 bp CTGAAGGCGGCCTCTTCCCCAAAGCCAGGCGGCTGTTaGGTGGAGAATAAGGTTGTGGGAACAATATCACAT +
Preference number: 3 (lower is better)
Translates to: LKAASSPKPGGC*VENKVVGTISH
Trigger: ATGTGATATTGTTCCCACAACCTTATTCTCCACTCAACAGCCGCCTGGCTTTGGGGAAGAGGCCGCCTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CCA 72 bp GGAGCTGAGAATATCCTTCTCCCCACATCTAACCCGTaGGCAGAATTCTGTGAGCGTTTCCCTGCCTTTAGG +
Preference number: 3 (lower is better)
Translates to: GAENILLPTSNP*AEFCERFPAFR
Trigger: CCTAAAGGCAGGGAAACGCTCACAGAATTCTGCCCACGGGTTAGATGTGGGGAGAAGGATATTCTCAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CCA 72 bp AGGCGGCCTCTTCCCCAAAGCCAGGCGGCTGTTGAGTaGAGAATAAGGTTGTGGGAACAATATCACATTCAC +
Preference number: 3 (lower is better)
Translates to: RRPLPQSQAAVE*RIRLWEQYHIH
Trigger: GTGAATGTGATATTGTTCCCACAACCTTATTCTCCACTCAACAGCCGCCTGGCTTTGGGGAAGAGGCCGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CAA 90 bp GAATCAGACTGGAAAGCAAGTCAGTACTTCAGAGTAGCCCCGCAGAAAAAGAGCCTCAAGTTACCGACGTaGGTAGGAGCTGGGCTCGCA +
Preference number: 3 (lower is better)
Translates to: ESDWKASQYFRVAPQKKSLKLPT*VGAGLA
Trigger: TGCGAGCCCAGCTCCTACCAACGTCGGTAACTTGAG...GCTCTTTTTCTGCGGGGCTACTCTGAAGTACTGACTTGCTTTCCAGTCTGATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CAA 90 bp TGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAGATACTAGAGACACACGCTCTTGATGCGTTCTaGAGTTTCTTGCCCCCTGCC +
Preference number: 3 (lower is better)
Translates to: CLPYRDQCISCVEILETHALDAF*SFLPPA
Trigger: GGCAGGGGGCAAGAAACTCAAGAACGCATCAAGAGC...GTGTGTCTCTAGTATCTCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR TCA 72 bp CCAAGCGCGTGTCCCAGCTCCTTCTATCACCAGCTGTaGTCTCAGAGAAGTCACAAACTTCCCAAAGCTTTG +
Preference number: 3 (lower is better)
Translates to: PSACPSSFYHQL*SQRSHKLPKAL
Trigger: CAAAGCTTTGGGAAGTTTGTGACTTCTCTGAGATCACAGCTGGTGATAGAAGGAGCTGGGACACGCGCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CAA 90 bp GAATCAGACTGGAAAGCAAGTCAGTACTTCAGAGTAGCCCCGCAGAAAAAGAGCGCCTTGGGGGACAACTaGCATCAGCAGCTAAGAACT +
Preference number: 3 (lower is better)
Translates to: ESDWKASQYFRVAPQKKSALGDN*HQQLRT
Trigger: AGTTCTTAGCTGCTGATGCAAGTTGTCCCCCAAGGC...GCTCTTTTTCTGCGGGGCTACTCTGAAGTACTGACTTGCTTTCCAGTCTGATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CAA 90 bp TATTGCTCCCTTGTGGGTGGGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCAAAGTACCACACATATaGCACTTTTTGCCGAACGAA +
Preference number: 3 (lower is better)
Translates to: YCSLVGGRAEYLGRTHHSKVPHI*HFLPNE
Trigger: TTCGTTCGGCAAAAAGTGCAATATGTGTGGTACTTT...GCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR TCA 72 bp GAGCCAGCAGCAGCCCATTATCTGCACTGGGGAATGTaGCATTATTCCATCTGGGGTCATATGTTTCCAGGA +
Preference number: 3 (lower is better)
Translates to: EPAAAHYLHWGM*HYSIWGHMFPG
Trigger: TCCTGGAAACATATGACCCCAGATGGAATAATGTCACATTCCCCAGTGCAGATAATGGGCTGCTGCTGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR GCA 72 bp CCAGAATGGAACCCCCTAGACTTTCCACACGTCACCTaGCTGAACGCTAACTACAAAGAGGAAAGGCAACTT +
Preference number: 3 (lower is better)
Translates to: PEWNPLDFPHVT*LNANYKEERQL
Trigger: AAGTTGCCTTTCCTCTTTGTAGTTAGCGTTCAGGCAGGTGACGTGTGGAAAGTCTAGGGGGTTCCATTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR TCA 72 bp ACCGGTGTCAGCCACTGTTCACAGGGACTGAGACTGTaGAATGACACACTGCATATTGTCTCTATAGGAGGT +
Preference number: 3 (lower is better)
Translates to: TGVSHCSQGLRL*NDTLHIVSIGG
Trigger: ACCTCCTATAGAGACAATATGCAGTGTGTCATTTCACAGTCTCAGTCCCTGTGAACAGTGGCTGACACCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CCA 72 bp CTAATGTACAAATATAAGCTATTGCTCCCTTGTGGGTaGGCGAGCAGAGTATCTGGGCAGAACCCATCACAG +
Preference number: 3 (lower is better)
Translates to: LMYKYKLLLPCG*ASRVSGQNPSQ
Trigger: CTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATAGCTTATATTTGTACATTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CAA 90 bp TGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAGATACTAGAGACACACCCTCAGCAGCTTACATaGCAGTCAATACAGAGGGTT +
Preference number: 3 (lower is better)
Translates to: CLPYRDQCISCVEILETHPQQLT*QSIQRV
Trigger: AACCCTCTGTATTGACTGCAATGTAAGCTGCTGAGG...GTGTGTCTCTAGTATCTCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CAA 90 bp AAAGAATTAAAGCATGATCTGGGGGAAAGGCACCGCACTACCACTTCACATGGGACTATGTTCCAGCACTaGCCACAGAAAACTTTGTGG +
Preference number: 3 (lower is better)
Translates to: KELKHDLGERHRTTTSHGTMFQH*PQKTLW
Trigger: CCACAAAGTTTTCTGTGGCAAGTGCTGGAACATAGT...CCCATGTGAAGTGGTAGTGCGGTGCCTTTCCCCCAGATCATGCTTTAATTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR TCA 72 bp ATGGTGGAAAGGTCTCACCACTTGAATTTCCTTGACTaGGCAAATCTTCTGCAGACAGACACCACAGAGCCA +
Preference number: 3 (lower is better)
Translates to: MVERSHHLNFLD*ANLLQTDTTEP
Trigger: TGGCTCTGTGGTGTCTGTCTGCAGAAGATTTGCTCAGTCAAGGAAATTCAAGTGGTGAGACCTTTCCACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR TCA 72 bp CTTTCTCTCCACTTCTTTCCCCTTCAGAGATTTTGGTaGAGGCAGGTTTCTCTTACCACCCATGGTGGAAAG +
Preference number: 3 (lower is better)
Translates to: LSLHFFPLQRFW*RQVSLTTHGGK
Trigger: CTTTCCACCATGGGTGGTAAGAGAAACCTGCCTTCACCAAAATCTCTGAAGGGGAAAGAAGTGGAGAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CAA 90 bp ATCACTCTGGAGCTGAGAATATCCTTCTCCCCACATCTAACCCGTGGGCAGAATTCACCAAGGTTGCCCTaGATAATAAACGGATGTAAT +
Preference number: 3 (lower is better)
Translates to: ITLELRISFSPHLTRGQNSPRLP*IINGCN
Trigger: ATTACATCCGTTTATTATCAAGGGCAACCTTGGTGA...ATTCTGCCCACGGGTTAGATGTGGGGAGAAGGATATTCTCAGCTCCAGAGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR TCA 72 bp TGTCAGCCACTGTTCACAGGGACTGAGACTGTGAAATaGCACACTGCATATTGTCTCTATAGGAGGTCGAAT +
Preference number: 3 (lower is better)
Translates to: CQPLFTGTETVK*HTAYCLYRRSN
Trigger: ATTCGACCTCCTATAGAGACAATATGCAGTGTGTCATTTCACAGTCTCAGTCCCTGTGAACAGTGGCTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CAA 90 bp GAATCAGACTGGAAAGCAAGTCAGTACTTCAGAGTAGCCCCGCAGAAAAAGAGCTTTCCTGATGTCTTCTaGATTTGCCTTGTAGCAATA +
Preference number: 3 (lower is better)
Translates to: ESDWKASQYFRVAPQKKSFPDVF*ICLVAI
Trigger: TATTGCTACAAGGCAAATCAAGAAGACATCAGGAAA...GCTCTTTTTCTGCGGGGCTACTCTGAAGTACTGACTTGCTTTCCAGTCTGATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR TCA 72 bp GCTGATGATGATACAGTAGTGTACACACTGCTAACGTaGATCAGACTGGAAAGCAAGTCAGTACTTCAGAGT +
Preference number: 3 (lower is better)
Translates to: ADDDTVVYTLLT*IRLESKSVLQS
Trigger: ACTCTGAAGTACTGACTTGCTTTCCAGTCTGATTCACGTTAGCAGTGTGTACACTACTGTATCATCATCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR TCA 72 bp AAGGTTGTGGGAACAATATCACATTCACCCTGTGCTTaGCCAAAATGGGGGCTTTGTTTATACAGCTGTTTG +
Preference number: 3 (lower is better)
Translates to: KVVGTISHSPCA*PKWGLCLYSCL
Trigger: CAAACAGCTGTATAAACAAAGCCCCCATTTTGGTCAAGCACAGGGTGAATGTGATATTGTTCCCACAACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR TCA 72 bp CAAAATGGGGGCTTTGTTTATACAGCTGTTTGCTTATaGAAAGAGTCAGATGCTACTGAGGAAAGAGAAGGG +
Preference number: 3 (lower is better)
Translates to: QNGGFVYTAVCL*KESDATEEREG
Trigger: CCCTTCTCTTTCCTCAGTAGCATCTGACTCTTTTCATAAGCAAACAGCTGTATAAACAAAGCCCCCATTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR-3UTR CAA 90 bp AAGTGCTTGGTAAAACTAATGTACAAATATAAGCTATTGCTCCCTTGTGGGTGGCTGCTTTCACCAAGGTaGCCCTTGATAATAAACGGA +
Preference number: 3 (lower is better)
Translates to: KCLVKLMYKYKLLLPCGWLLSPR*PLIING
Trigger: TCCGTTTATTATCAAGGGCAACCTTGGTGAAAGCAG...CCACCCACAAGGGAGCAATAGCTTATATTTGTACATTAGTTTTACCAAGCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR TCA 72 bp GTCACAAACTTCCCAAAGCTTTGGTTTCTTCAGCTGTaGAAAATAAGGACAGTATCTCCCCAGCTAATTTCA +
Preference number: 3 (lower is better)
Translates to: VTNFPKLWFLQL*KIRTVSPQLIS
Trigger: TGAAATTAGCTGGGGAGATACTGTCCTTATTTTTCACAGCTGAAGAAACCAAAGCTTTGGGAAGTTTGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR GCA 72 bp GATGTCTTCTTGATTTGCCTTGTAGCAATATGTGGTTaGTCAGCTTCAGTGAAAAATATATTGCCTTTTCCC +
Preference number: 3 (lower is better)
Translates to: DVFLICLVAICG*SASVKNILPFP
Trigger: GGGAAAAGGCAATATATTTTTCACTGAAGCTGAGCAACCACATATTGCTACAAGGCAAATCAAGAAGACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR TCA 72 bp AAGAATGCTGATTCCCACATGGTGGAAAACAAACTCTaGAGTGACTTTGGATTTAGCATTGACATAAATGGA +
Preference number: 3 (lower is better)
Translates to: KNADSHMVENKL*SDFGFSIDING
Trigger: TCCATTTATGTCAATGCTAAATCCAAAGTCACTTCAGAGTTTGTTTTCCACCATGTGGGAATCAGCATTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TGGACAGCTGCACTGTCACCTGAAGGCGGCCTCTTCCCCAAAGCCAGGCGGCTGGGGGCTGGGTCAGGCTaGACGGTGGGGCCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: WTAALSPEGGLFPKARRLGAGSG*TVGPAE
Trigger: CTCAGCAGGCCCCACCGTTCAGCCTGACCCAGCCCC...CAGCCGCCTGGCTTTGGGGAAGAGGCCGCCTTCAGGTGACAGTGCAGCTGTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp GGGCTCGCATGGCCAGAATGGAACCCCCTAGACTTTCCACACGTCACCTGCCTGGGCCCGCGCTGCAAGTaGCTCGGGCCATCCGCCATG +
Preference number: 4 (lower is better)
Translates to: GLAWPEWNPLDFPHVTCLGPRCK*LGPSAM
Trigger: CATGGCGGATGGCCCGAGGCACTTGCAGCGCGGGCC...CAGGCAGGTGACGTGTGGAAAGTCTAGGGGGTTCCATTCTGGCCATGCGAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TGGACAGCTGCACTGTCACCTGAAGGCGGCCTCTTCCCCAAAGCCAGGCGGCTGGGTGGCCTGATGCCGTaGGATGCGGCCCCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: WTAALSPEGGLFPKARRLGGLMP*DAAPWQ
Trigger: TTGCCAAGGGGCCGCATCGCACGGCATCAGGCCACC...CAGCCGCCTGGCTTTGGGGAAGAGGCCGCCTTCAGGTGACAGTGCAGCTGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp GGGCTCGCATGGCCAGAATGGAACCCCCTAGACTTTCCACACGTCACCTGCCTGCCACCTCCGTCTTGGTaGTCCGGTGCCGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GLAWPEWNPLDFPHVTCLPPPSW*SGAAPA
Trigger: AGCTGGGGCGGCACCGGATCACCAAGACGGAGGTGG...CAGGCAGGTGACGTGTGGAAAGTCTAGGGGGTTCCATTCTGGCCATGCGAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TGGACAGCTGCACTGTCACCTGAAGGCGGCCTCTTCCCCAAAGCCAGGCGGCTGACCCTGGAGACCGACTaGCCGCAAGCCAGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: WTAALSPEGGLFPKARRLTLETD*PQASSV
Trigger: GACACTGCTGGCTTGCGGGCAGTCGGTCTCCAGGGT...CAGCCGCCTGGCTTTGGGGAAGAGGCCGCCTTCAGGTGACAGTGCAGCTGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp GCTGAAAGGCAGGCGGGTCTGCGGGGTTTTTGTCTCCCTCAGCCTGGTTCAGTGCCCGGGGACCGGAAGTaGAGGGCAGGGGCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: AERQAGLRGFCLPQPGSVPGDRK*RAGAEA
Trigger: AGCTTCAGCCCCTGCCCTCCACTTCCGGTCCCCGGG...CACTGAACCAGGCTGAGGGAGACAAAAACCCCGCAGACCCGCCTGCCTTTCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TGGACAGCTGCACTGTCACCTGAAGGCGGCCTCTTCCCCAAAGCCAGGCGGCTGACCCATGGTGAGCGCTaGCGACCAGGCAGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: WTAALSPEGGLFPKARRLTHGER*RPGSLW
Trigger: CCAGAGACTGCCTGGTCGCCAGCGCTCACCATGGGT...CAGCCGCCTGGCTTTGGGGAAGAGGCCGCCTTCAGGTGACAGTGCAGCTGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp GCTGAAAGGCAGGCGGGTCTGCGGGGTTTTTGTCTCCCTCAGCCTGGTTCAGTGTGGCGAGGGGGCAGCTaGGGACGGTCAGTGTCACCG +
Preference number: 4 (lower is better)
Translates to: AERQAGLRGFCLPQPGSVWRGGS*GRSVSP
Trigger: CGGTGACACTGACCGTCCCCAGCTGCCCCCTCGCCA...CACTGAACCAGGCTGAGGGAGACAAAAACCCCGCAGACCCGCCTGCCTTTCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CAA 72 bp CTTCCCTGGCCCAGGGCTGGTGCTCTTGATGCGTTCTaGAGTTTCTTGCCCCCTGCCTCCACGGTGGCGGGT +
Preference number: 4 (lower is better)
Translates to: LPWPRAGALDAF*SFLPPASTVAG
Trigger: ACCCGCCACCGTGGAGGCAGGGGGCAAGAAACTCAAGAACGCATCAAGAGCACCAGCCCTGGGCCAGGGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TATTGCTCCCTTGTGGGTGGGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCTCGGGCCATCCGCCATaGCCATGCTGGGCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: YCSLVGGRAEYLGRTHHSSGHPP*PCWAPL
Trigger: CAGCGGGGCCCAGCATGGTCATGGCGGATGGCCCGA...GCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TGGACAGCTGCACTGTCACCTGAAGGCGGCCTCTTCCCCAAAGCCAGGCGGCTGAGCTGCACTGTCACCTaGAGGCGGCCTCTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: WTAALSPEGGLFPKARRLSCTVT*RRPLPQ
Trigger: TTGGGGAAGAGGCCGCCTTCAGGTGACAGTGCAGCT...CAGCCGCCTGGCTTTGGGGAAGAGGCCGCCTTCAGGTGACAGTGCAGCTGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TGTGTGGGTGGAGGTGGGGGAGTCGTCAGTCTTATGATGAGTCTCTTCTGCTGGCGGACCGGCCCGCGCTaGAAGTGCCTCGGGCCATCC +
Preference number: 4 (lower is better)
Translates to: CVGGGGGVVSLMMSLFCWRTGPR*KCLGPS
Trigger: GGATGGCCCGAGGCACTTGCAGCGCGGGCCGGTCCG...CCAGCAGAAGAGACTCATCATAAGACTGACGACTCCCCCACCTCCACCCACACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TGGGCCCCCTCTTCCTGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGGGTGGCGGTGGCGGCTaGTGCTGCTGTAGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: WAPSSCRANMLFALQGPVGGGGG*CCCSCV
Trigger: CACGCAGCTACAGCAGCAGCAGCCGCCACCGCCACC...CACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACAGGAAGAGGGGGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp GGGCTCGCATGGCCAGAATGGAACCCCCTAGACTTTCCACACGTCACCTGCCTGGCTGGGGATGCACGCTaGCAGGGAGAGTGGAGACGC +
Preference number: 4 (lower is better)
Translates to: GLAWPEWNPLDFPHVTCLAGDAR*QGEWRR
Trigger: GCGTCTCCACTCTCCCTGCCAGCGTGCATCCCCAGC...CAGGCAGGTGACGTGTGGAAAGTCTAGGGGGTTCCATTCTGGCCATGCGAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TGGGCCCCCTCTTCCTGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGTGCCGTGGGGACAGCTaGGGATGCACGCTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: WAPSSCRANMLFALQGPVCRGDS*GCTLAG
Trigger: CCCTGCCAGCGTGCATCCCCAGCTGTCCCCACGGCA...CACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACAGGAAGAGGGGGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TGGGCCCCCTCTTCCTGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGACGGGGCTCAGGGGCTaGGTCAGGCTGAACGGTGGG +
Preference number: 4 (lower is better)
Translates to: WAPSSCRANMLFALQGPVTGLRG*VRLNGG
Trigger: CCCACCGTTCAGCCTGACCCAGCCCCTGAGCCCCGT...CACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACAGGAAGAGGGGGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TGGGCCCCCTCTTCCTGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGCGCCGCTGCCGTGTGTaGCGGATCCTGATAGGCCTG +
Preference number: 4 (lower is better)
Translates to: WAPSSCRANMLFALQGPVRRCRV*RILIGL
Trigger: CAGGCCTATCAGGATCCGTCACACACGGCAGCGGCG...CACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACAGGAAGAGGGGGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp GGGCTCGCATGGCCAGAATGGAACCCCCTAGACTTTCCACACGTCACCTGCCTGCTGCTGAGAAGGCGGTaGAGTCTCCTGGCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: GLAWPEWNPLDFPHVTCLLLRRR*SLLAGK
Trigger: CTTCCCCGCCAGGAGACTCCACCGCCTTCTCAGCAG...CAGGCAGGTGACGTGTGGAAAGTCTAGGGGGTTCCATTCTGGCCATGCGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CAA 72 bp CCCAGGGCTGGTGCTCTTGATGCGTTCTTGAGTTTCTaGCCCCCTGCCTCCACGGTGGCGGGTCTCCTGTCA +
Preference number: 4 (lower is better)
Translates to: PRAGALDAFLSF*PPASTVAGLLS
Trigger: TGACAGGAGACCCGCCACCGTGGAGGCAGGGGGCAAGAAACTCAAGAACGCATCAAGAGCACCAGCCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp GGGCTCGCATGGCCAGAATGGAACCCCCTAGACTTTCCACACGTCACCTGCCTGCCCGTTAGGTCGCTCTaGTGGGCTCCATCCACAGGA +
Preference number: 4 (lower is better)
Translates to: GLAWPEWNPLDFPHVTCLPVRSL*WAPSTG
Trigger: TCCTGTGGATGGAGCCCAGCAGAGCGACCTAACGGG...CAGGCAGGTGACGTGTGGAAAGTCTAGGGGGTTCCATTCTGGCCATGCGAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TGGACAGCTGCACTGTCACCTGAAGGCGGCCTCTTCCCCAAAGCCAGGCGGCTGCCAGGAGGTGGAGGTTaGAGTGAGCTGAAATCACGC +
Preference number: 4 (lower is better)
Translates to: WTAALSPEGGLFPKARRLPGGGG*SELKSR
Trigger: GCGTGATTTCAGCTCACTGCAACCTCCACCTCCTGG...CAGCCGCCTGGCTTTGGGGAAGAGGCCGCCTTCAGGTGACAGTGCAGCTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp GGGCTCGCATGGCCAGAATGGAACCCCCTAGACTTTCCACACGTCACCTGCCTGAAAAGGCCTCCACGTTaGATGCCTGGGGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: GLAWPEWNPLDFPHVTCLKRPPR*MPGGGG
Trigger: CCCTCCTCCCCCAGGCATCCAACGTGGAGGCCTTTT...CAGGCAGGTGACGTGTGGAAAGTCTAGGGGGTTCCATTCTGGCCATGCGAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp GGGCTCGCATGGCCAGAATGGAACCCCCTAGACTTTCCACACGTCACCTGCCTGCGCTGGCAGGGAGAGTaGAGACGCTTTCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GLAWPEWNPLDFPHVTCLRWQGE*RRFPAA
Trigger: AGCAGCAGGAAAGCGTCTCCACTCTCCCTGCCAGCG...CAGGCAGGTGACGTGTGGAAAGTCTAGGGGGTTCCATTCTGGCCATGCGAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp GGGCTCGCATGGCCAGAATGGAACCCCCTAGACTTTCCACACGTCACCTGCCTGCTGTGCTGCAGGTACTaGGTCTCCAGGCTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: GLAWPEWNPLDFPHVTCLLCCRY*VSRLCR
Trigger: ACGGCAGAGCCTGGAGACCCAGTACCTGCAGCACAG...CAGGCAGGTGACGTGTGGAAAGTCTAGGGGGTTCCATTCTGGCCATGCGAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp GGGCTCGCATGGCCAGAATGGAACCCCCTAGACTTTCCACACGTCACCTGCCTGTGCGATGCGGCCCCTTaGCAATTGAGGAAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: GLAWPEWNPLDFPHVTCLCDAAP*QLRKGV
Trigger: CACCCCCTTCCTCAATTGCCAAGGGGCCGCATCGCA...CAGGCAGGTGACGTGTGGAAAGTCTAGGGGGTTCCATTCTGGCCATGCGAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TGGACAGCTGCACTGTCACCTGAAGGCGGCCTCTTCCCCAAAGCCAGGCGGCTGGCCTTGGCAACTGTTTaGTCAGCAATGGTGCTAGGC +
Preference number: 4 (lower is better)
Translates to: WTAALSPEGGLFPKARRLALATV*SAMVLG
Trigger: GCCTAGCACCATTGCTGAGCAAACAGTTGCCAAGGC...CAGCCGCCTGGCTTTGGGGAAGAGGCCGCCTTCAGGTGACAGTGCAGCTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp GGGCTCGCATGGCCAGAATGGAACCCCCTAGACTTTCCACACGTCACCTGCCTGGGGCTGTATTGCATCTaGTCGGAGGAAGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GLAWPEWNPLDFPHVTCLGLYCI*SEEGSR
Trigger: CCTGGAGCCTTCCTCCGAGCAGATGCAATACAGCCC...CAGGCAGGTGACGTGTGGAAAGTCTAGGGGGTTCCATTCTGGCCATGCGAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp GGGCTCGCATGGCCAGAATGGAACCCCCTAGACTTTCCACACGTCACCTGCCTGCAGAGCCTGCATGGCTaGGTTGGTAGGTCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: GLAWPEWNPLDFPHVTCLQSLHG*VGRSQA
Trigger: AGCCTGAGACCTACCAACCCAGCCATGCAGGCTCTG...CAGGCAGGTGACGTGTGGAAAGTCTAGGGGGTTCCATTCTGGCCATGCGAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TGGACAGCTGCACTGTCACCTGAAGGCGGCCTCTTCCCCAAAGCCAGGCGGCTGTTCTGCTGGAGACTTTaGTCCACGAGAGAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: WTAALSPEGGLFPKARRLFCWRL*STREGR
Trigger: CCTACCCTCTCTCGTGGACCAAAGTCTCCAGCAGAA...CAGCCGCCTGGCTTTGGGGAAGAGGCCGCCTTCAGGTGACAGTGCAGCTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TGGACAGCTGCACTGTCACCTGAAGGCGGCCTCTTCCCCAAAGCCAGGCGGCTGCCCACATCTAACCCGTaGGCAGAATTCTGTGAGCGT +
Preference number: 4 (lower is better)
Translates to: WTAALSPEGGLFPKARRLPTSNP*AEFCER
Trigger: ACGCTCACAGAATTCTGCCCACGGGTTAGATGTGGG...CAGCCGCCTGGCTTTGGGGAAGAGGCCGCCTTCAGGTGACAGTGCAGCTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TATTGCTCCCTTGTGGGTGGGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCACAGCTCTCCCTGGGTaGGTCTGCGAGCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: YCSLVGGRAEYLGRTHHSTALPG*VCEHCC
Trigger: GCAGCAGTGCTCGCAGACCCACCCAGGGAGAGCTGT...GCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CAA 72 bp GGGAAGGGACACAAGAGGCAAGGGCTGGCTTCAGTCTaGGGCTCCTGTCTGTCCCAACCACTGACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GKGHKRQGLASV*GSCLSQPLTPA
Trigger: TGCTGGAGTCAGTGGTTGGGACAGACAGGAGCCCAAGACTGAAGCCAGCCCTTGCCTCTTGTGTCCCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CAA 72 bp CCCAGGAGGCAGTTAGAGGCAGCCCAGTTTAGGAGTTaGAGTGTAGCAGGTCAGCCCTGGCACCGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: PRRQLEAAQFRS*SVAGQPWHRCQ
Trigger: CTGACACCGGTGCCAGGGCTGACCTGCTACACTCAAACTCCTAAACTGGGCTGCCTCTAACTGCCTCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp CGAAGGGCAGGAGCCTCAGCCTACAACTATGTTCCAGCACTTGCCACAGAAAACAACGGTGGGGCCTGCTaGGAAGGCGGTGGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: RRAGASAYNYVPALATENNGGAC*EGGGVS
Trigger: GGAGACTCCACCGCCTTCTCAGCAGGCCCCACCGTT...GTTTTCTGTGGCAAGTGCTGGAACATAGTTGTAGGCTGAGGCTCCTGCCCTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp GCTGAAAGGCAGGCGGGTCTGCGGGGTTTTTGTCTCCCTCAGCCTGGTTCAGTGTGTCAGTTCCACGTGTaGCACCTCTGGAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: AERQAGLRGFCLPQPGSVCQFHV*HLWSPE
Trigger: CTCAGGACTCCAGAGGTGTCACACGTGGAACTGACA...CACTGAACCAGGCTGAGGGAGACAAAAACCCCGCAGACCCGCCTGCCTTTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGATCCTGGCACCCATGGTaGGCGCTGGCGACCAGGCAG +
Preference number: 4 (lower is better)
Translates to: CRANMLFALQGPVYQLRGSWHPW*ALATRQ
Trigger: CTGCCTGGTCGCCAGCGCTCACCATGGGTGCCAGGA...TCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TATTGCTCCCTTGTGGGTGGGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCGTGTCACCGGGAATGTaGAAGTGGGCCCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: YCSLVGGRAEYLGRTHHSVSPGM*KWAPSS
Trigger: GGAAGAGGGGGCCCACTTTCACATTCCCGGTGACAC...GCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TATTGCTCCCTTGTGGGTGGGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCTCACCACAGCGAAGTTaGCCTTGCCCAGCGTGCCCT +
Preference number: 4 (lower is better)
Translates to: YCSLVGGRAEYLGRTHHSSPQRS*PCPACP
Trigger: AGGGCACGCTGGGCAAGGGCAACTTCGCTGTGGTGA...GCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TATTGCTCCCTTGTGGGTGGGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCTGGAATCTGCTGGCCTaGAGTGGTGGCCTGATGCCG +
Preference number: 4 (lower is better)
Translates to: YCSLVGGRAEYLGRTHHSWNLLA*SGGLMP
Trigger: CGGCATCAGGCCACCACTGCAGGCCAGCAGATTCCA...GCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TATTGCTCCCTTGTGGGTGGGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCGGGCAGCTGCTGACTTaGCTGTGGGTAGGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: YCSLVGGRAEYLGRTHHSGQLLT*LWVGAL
Trigger: GAGAGCTCCTACCCACAGCCAAGTCAGCAGCTGCCC...GCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp GGGCTCGCATGGCCAGAATGGAACCCCCTAGACTTTCCACACGTCACCTGCCTGCCCTCTGATTCCAGTTaGGTGGCTCGATTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: GLAWPEWNPLDFPHVTCLPSDSS*VARFLP
Trigger: GGGGAGAAATCGAGCCACCCAACTGGAATCAGAGGG...CAGGCAGGTGACGTGTGGAAAGTCTAGGGGGTTCCATTCTGGCCATGCGAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TATTGCTCCCTTGTGGGTGGGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCCGACCAGGCAGTCTCTaGCCAGCAACAGGGACTGCT +
Preference number: 4 (lower is better)
Translates to: YCSLVGGRAEYLGRTHHSRPGSL*PATGTA
Trigger: AGCAGTCCCTGTTGCTGGCCAGAGACTGCCTGGTCG...GCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp GCTGAAAGGCAGGCGGGTCTGCGGGGTTTTTGTCTCCCTCAGCCTGGTTCAGTGGAAACTGCTCCGATGTaGTTTCAGGCGCTCCACCAA +
Preference number: 4 (lower is better)
Translates to: AERQAGLRGFCLPQPGSVETAPM*FQALHQ
Trigger: TTGGTGGAGCGCCTGAAATCACATCGGAGCAGTTTC...CACTGAACCAGGCTGAGGGAGACAAAAACCCCGCAGACCCGCCTGCCTTTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp GGGCTCGCATGGCCAGAATGGAACCCCCTAGACTTTCCACACGTCACCTGCCTGGCCAGATGCTGGAAATaGAAAGGCCTCCACGTTGGA +
Preference number: 4 (lower is better)
Translates to: GLAWPEWNPLDFPHVTCLARCWK*KGLHVG
Trigger: TCCAACGTGGAGGCCTTTTCATTTCCAGCATCTGGC...CAGGCAGGTGACGTGTGGAAAGTCTAGGGGGTTCCATTCTGGCCATGCGAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp GGGCTCGCATGGCCAGAATGGAACCCCCTAGACTTTCCACACGTCACCTGCCTGATGCGGGGTGAAGGCTaGTTGGCTAACATGATGTCC +
Preference number: 4 (lower is better)
Translates to: GLAWPEWNPLDFPHVTCLMRGEG*LANMMS
Trigger: GGACATCATGTTAGCCAATCAGCCTTCACCCCGCAT...CAGGCAGGTGACGTGTGGAAAGTCTAGGGGGTTCCATTCTGGCCATGCGAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TGGACAGCTGCACTGTCACCTGAAGGCGGCCTCTTCCCCAAAGCCAGGCGGCTGCCTGCAGTTCTGAAATaGGTGGCCCCCATTTTCAAT +
Preference number: 4 (lower is better)
Translates to: WTAALSPEGGLFPKARRLPAVLK*VAPIFN
Trigger: ATTGAAAATGGGGGCCACTCATTTCAGAACTGCAGG...CAGCCGCCTGGCTTTGGGGAAGAGGCCGCCTTCAGGTGACAGTGCAGCTGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TATTGCTCCCTTGTGGGTGGGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCCTCCTTTTCCCACGGTaGCAGAAGGCAGTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: YCSLVGGRAEYLGRTHHSLLFPR*QKAVQA
Trigger: TGCCTGCACTGCCTTCTGTCACCGTGGGAAAAGGAG...GCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp GGGCTCGCATGGCCAGAATGGAACCCCCTAGACTTTCCACACGTCACCTGCCTGCTGCAGTCCCCGAAGTaGAGCAAACCTTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: GLAWPEWNPLDFPHVTCLLQSPK*SKPFSP
Trigger: TGGAGAGAAAGGTTTGCTTCACTTCGGGGACTGCAG...CAGGCAGGTGACGTGTGGAAAGTCTAGGGGGTTCCATTCTGGCCATGCGAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TGGGCCCCCTCTTCCTGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGCGGCCATCAAGTCTCTaGTCCACTGGGAAACTGCTC +
Preference number: 4 (lower is better)
Translates to: WAPSSCRANMLFALQGPVRPSSL*STGKLL
Trigger: GAGCAGTTTCCCAGTGGAGCAGAGACTTGATGGCCG...CACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACAGGAAGAGGGGGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TGTGTGGGTGGAGGTGGGGGAGTCGTCAGTCTTATGATGAGTCTCTTCTGCTGGGCCGTCTCTGCCCGCTaGGTGTGGACTGAAATGCCT +
Preference number: 4 (lower is better)
Translates to: CVGGGGGVVSLMMSLFCWAVSAR*VWTEMP
Trigger: AGGCATTTCAGTCCACACGCAGCGGGCAGAGACGGC...CCAGCAGAAGAGACTCATCATAAGACTGACGACTCCCCCACCTCCACCCACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TATTGCTCCCTTGTGGGTGGGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCCATGTCTCCAGAGGCTaGTTAGTGCCCACACGCCTG +
Preference number: 4 (lower is better)
Translates to: YCSLVGGRAEYLGRTHHSHVSRG*LVPTRL
Trigger: CAGGCGTGTGGGCACTAAGCAGCCTCTGGAGACATG...GCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp GGGCTCGCATGGCCAGAATGGAACCCCCTAGACTTTCCACACGTCACCTGCCTGCCAGCCCTTCGTCAATaGAGGTCTCCATCATGTTGC +
Preference number: 4 (lower is better)
Translates to: GLAWPEWNPLDFPHVTCLPALRQ*RSPSCC
Trigger: GCAACATGATGGAGACCTCCATTGACGAAGGGCTGG...CAGGCAGGTGACGTGTGGAAAGTCTAGGGGGTTCCATTCTGGCCATGCGAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TGTGTGGGTGGAGGTGGGGGAGTCGTCAGTCTTATGATGAGTCTCTTCTGCTGGACCGAGTGGCTCGGGTaGCTTCCCAGGAGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: CVGGGGGVVSLMMSLFCWTEWLG*LPRRQL
Trigger: TAACTGCCTCCTGGGAAGCCACCCGAGCCACTCGGT...CCAGCAGAAGAGACTCATCATAAGACTGACGACTCCCCCACCTCCACCCACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TGTGTGGGTGGAGGTGGGGGAGTCGTCAGTCTTATGATGAGTCTCTTCTGCTGGAGCCTCCCGAGTAGCTaGAACTACAGGCGCCCACCA +
Preference number: 4 (lower is better)
Translates to: CVGGGGGVVSLMMSLFCWSLPSS*NYRRPP
Trigger: TGGTGGGCGCCTGTAGTTCCAGCTACTCGGGAGGCT...CCAGCAGAAGAGACTCATCATAAGACTGACGACTCCCCCACCTCCACCCACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TGGGCCCCCTCTTCCTGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGGCTATTGCTCCCTTGTaGGTGGGCGAGCAGAGTATC +
Preference number: 4 (lower is better)
Translates to: WAPSSCRANMLFALQGPVAIAPL*VGEQSI
Trigger: GATACTCTGCTCGCCCACCCACAAGGGAGCAATAGC...CACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACAGGAAGAGGGGGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CAA 72 bp CTTAGGAACACATTTGTCAGTGCTGCCCTCGAGAGCTaGCTCCACTCGACCGAAGGGCAGGAGCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: LRNTFVSAALES*LHSTEGQEPQP
Trigger: AGGCTGAGGCTCCTGCCCTTCGGTCGAGTGGAGCAAGCTCTCGAGGGCAGCACTGACAAATGTGTTCCTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CAA 72 bp TCTGGCCAGCAACAGGGACTGCTCAAGTTACCGACGTaGGTAGGAGCTGGGCTCGCATGGCCAGAATGGAAC +
Preference number: 4 (lower is better)
Translates to: SGQQQGLLKLPT*VGAGLAWPEWN
Trigger: GTTCCATTCTGGCCATGCGAGCCCAGCTCCTACCAACGTCGGTAACTTGAGCAGTCCCTGTTGCTGGCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CAA 72 bp GACCCCAAAAAGGAGCGCCACTCACTCACTGTGTCCTaGCATCCTCAACTGCCCGCATGTCTCCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: DPKKERHSLTVS*HPQLPACLQRL
Trigger: CAGCCTCTGGAGACATGCGGGCAGTTGAGGATGCAAGGACACAGTGAGTGAGTGGCGCTCCTTTTTGGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CAA 72 bp GGTGGCCTGATGCCGTGCGATGCGGCCCCTTGGCAATaGAGGAAGGGGGTGTTCTGTAGGAAACTGCTGTAT +
Preference number: 4 (lower is better)
Translates to: GGLMPCDAAPWQ*RKGVFCRKLLY
Trigger: ATACAGCAGTTTCCTACAGAACACCCCCTTCCTCAATTGCCAAGGGGCCGCATCGCACGGCATCAGGCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TGGGCCCCCTCTTCCTGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGCAAGCAGACAGCCATTaGCCTTTGGAGTGTCCACAC +
Preference number: 4 (lower is better)
Translates to: WAPSSCRANMLFALQGPVQADSH*PLECPH
Trigger: GTGTGGACACTCCAAAGGTCAATGGCTGTCTGCTTG...CACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACAGGAAGAGGGGGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TGGACAGCTGCACTGTCACCTGAAGGCGGCCTCTTCCCCAAAGCCAGGCGGCTGTACACACTGCTAACGTaGATCAGACTGGAAAGCAAG +
Preference number: 4 (lower is better)
Translates to: WTAALSPEGGLFPKARRLYTLLT*IRLESK
Trigger: CTTGCTTTCCAGTCTGATTCACGTTAGCAGTGTGTA...CAGCCGCCTGGCTTTGGGGAAGAGGCCGCCTTCAGGTGACAGTGCAGCTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TGTGTGGGTGGAGGTGGGGGAGTCGTCAGTCTTATGATGAGTCTCTTCTGCTGGGAGGCTACTGGAAGGTaGGAGGCTCCACTGCTTTCG +
Preference number: 4 (lower is better)
Translates to: CVGGGGGVVSLMMSLFCWEATGR*EAPLLS
Trigger: CGAAAGCAGTGGAGCCTCTCACCTTCCAGTAGCCTC...CCAGCAGAAGAGACTCATCATAAGACTGACGACTCCCCCACCTCCACCCACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TGGACAGCTGCACTGTCACCTGAAGGCGGCCTCTTCCCCAAAGCCAGGCGGCTGAGAGTCAGATGCTACTaGGGAAAGAGAAGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: WTAALSPEGGLFPKARRLRVRCY*GKRRER
Trigger: TCTTTCCCTTCTCTTTCCTCAGTAGCATCTGACTCT...CAGCCGCCTGGCTTTGGGGAAGAGGCCGCCTTCAGGTGACAGTGCAGCTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TATTGCTCCCTTGTGGGTGGGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCGCGTGTGGACTGAAATaGCTCAAAGGCATGAGCGGG +
Preference number: 4 (lower is better)
Translates to: YCSLVGGRAEYLGRTHHSACGLK*LKGMSG
Trigger: CCCGCTCATGCCTTTGAGGCATTTCAGTCCACACGC...GCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGACTGCCCTCGAGAGCTTaGTCCACTCGACCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: CRANMLFALQGPVYQLRGLPSRA*STRPKG
Trigger: GCCCTTCGGTCGAGTGGAGCAAGCTCTCGAGGGCAG...TCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TGGGCCCCCTCTTCCTGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGGTGACTCCAGGCTGCTaGTTGTCACCTTGCCTTAGT +
Preference number: 4 (lower is better)
Translates to: WAPSSCRANMLFALQGPVVTPGC*LSPCLS
Trigger: ACTAAGGCAAGGTGACAAGCAGCAGCCTGGAGTCAC...CACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACAGGAAGAGGGGGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TGGGCCCCCTCTTCCTGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGCTGAAATCACGCCACTaGATTCCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: WAPSSCRANMLFALQGPVLKSRH*IPAWVT
Trigger: TGTCACCCAGGCTGGAATGCAGTGGCGTGATTTCAG...CACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACAGGAAGAGGGGGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TGTGTGGGTGGAGGTGGGGGAGTCGTCAGTCTTATGATGAGTCTCTTCTGCTGGAAAGGCAGGCGGGTCTaGGGGGTTTTTGTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: CVGGGGGVVSLMMSLFCWKGRRV*GVFVSL
Trigger: GAGGGAGACAAAAACCCCGCAGACCCGCCTGCCTTT...CCAGCAGAAGAGACTCATCATAAGACTGACGACTCCCCCACCTCCACCCACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TGGGCCCCCTCTTCCTGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGCTCTCTGAAGCTCACTaGAGACCTGTTGTGGACCTC +
Preference number: 4 (lower is better)
Translates to: WAPSSCRANMLFALQGPVLSEAH*RPVVDL
Trigger: GAGGTCCACAACAGGTCTCCAGTGAGCTTCAGAGAG...CACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACAGGAAGAGGGGGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TGGGCCCCCTCTTCCTGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGCTGCTGACTTGGCTGTaGGTAGGAGCTCTCTGCTAT +
Preference number: 4 (lower is better)
Translates to: WAPSSCRANMLFALQGPVLLTWL*VGALCY
Trigger: ATAGCAGAGAGCTCCTACCCACAGCCAAGTCAGCAG...CACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACAGGAAGAGGGGGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp GAATCAGACTGGAAAGCAAGTCAGTACTTCAGAGTAGCCCCGCAGAAAAAGAGCTCCTGGCTGTCGTGGTaGTGGAGGGGGTGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: ESDWKASQYFRVAPQKKSSWLSW*WRGWWR
Trigger: CCGCCACCACCCCCTCCACCACCACGACAGCCAGGA...GCTCTTTTTCTGCGGGGCTACTCTGAAGTACTGACTTGCTTTCCAGTCTGATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp CGAAGGGCAGGAGCCTCAGCCTACAACTATGTTCCAGCACTTGCCACAGAAAACAGAGCCTGTCTTCCCTaGCCCAGGGCTGGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: RRAGASAYNYVPALATENRACLP*PRAGAL
Trigger: AAGAGCACCAGCCCTGGGCCAGGGAAGACAGGCTCT...GTTTTCTGTGGCAAGTGCTGGAACATAGTTGTAGGCTGAGGCTCCTGCCCTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp CGAAGGGCAGGAGCCTCAGCCTACAACTATGTTCCAGCACTTGCCACAGAAAACATGACACTCGGTGTGTaGGTGGAGGTGGGGGAGTCG +
Preference number: 4 (lower is better)
Translates to: RRAGASAYNYVPALATENMTLGV*VEVGES
Trigger: CGACTCCCCCACCTCCACCCACACACCGAGTGTCAT...GTTTTCTGTGGCAAGTGCTGGAACATAGTTGTAGGCTGAGGCTCCTGCCCTTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp GGGCTCGCATGGCCAGAATGGAACCCCCTAGACTTTCCACACGTCACCTGCCTGCAGGCGGCTGTTGAGTaGAGAATAAGGTTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: GLAWPEWNPLDFPHVTCLQAAVE*RIRLWE
Trigger: TTCCCACAACCTTATTCTCCACTCAACAGCCGCCTG...CAGGCAGGTGACGTGTGGAAAGTCTAGGGGGTTCCATTCTGGCCATGCGAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp ATCACTCTGGAGCTGAGAATATCCTTCTCCCCACATCTAACCCGTGGGCAGAATGCTGGCCTGCAGTGGTaGCCTGATGCCGTGCGATGC +
Preference number: 4 (lower is better)
Translates to: ITLELRISFSPHLTRGQNAGLQW*PDAVRC
Trigger: GCATCGCACGGCATCAGGCCACCACTGCAGGCCAGC...ATTCTGCCCACGGGTTAGATGTGGGGAGAAGGATATTCTCAGCTCCAGAGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CAA 72 bp AGTGGGCCCCCTCTTCCTGTCGGGCTAACATGCTGTTaGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAG +
Preference number: 4 (lower is better)
Translates to: SGPPLPVGLTCC*PYRDQCISCVE
Trigger: CTCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACAGGAAGAGGGGGCCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TATTGCTCCCTTGTGGGTGGGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCAATGCAGCTTCCGCCTaGCAGCCAGATGCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: YCSLVGGRAEYLGRTHHSNAASA*QPDAGN
Trigger: ATTTCCAGCATCTGGCTGTCAGGCGGAAGCTGCATT...GCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TATTGCTCCCTTGTGGGTGGGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCAAGCCAGGCGGCTGTTaGGTGGAGAATAAGGTTGTG +
Preference number: 4 (lower is better)
Translates to: YCSLVGGRAEYLGRTHHSKPGGC*VENKVV
Trigger: CACAACCTTATTCTCCACTCAACAGCCGCCTGGCTT...GCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGACAGTTAACTGGACGCTaGAAGGCAGGCGGGTCTGCG +
Preference number: 4 (lower is better)
Translates to: CRANMLFALQGPVYQLRGQLTGR*KAGGSA
Trigger: CGCAGACCCGCCTGCCTTTCAGCGTCCAGTTAACTG...TCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp CAAACCTTTCTCTCCACTTCTTTCCCCTTCAGAGATTTTGGTGAAGGCAGGTTTCCTGCAGTGGTGGCCTaGTGCCGTGCGATGCGGCCC +
Preference number: 4 (lower is better)
Translates to: QTFLSTSFPFRDFGEGRFPAVVA*CRAMRP
Trigger: GGGCCGCATCGCACGGCATCAGGCCACCACTGCAGG...AAACCTGCCTTCACCAAAATCTCTGAAGGGGAAAGAAGTGGAGAGAAAGGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp AAAGAATTAAAGCATGATCTGGGGGAAAGGCACCGCACTACCACTTCACATGGGGGCCTCCACGTTGGATaGCTGGGGGAGGAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: KELKHDLGERHRTTTSHGGLHVG*LGEEGR
Trigger: TCTGCCCTCCTCCCCCAGGCATCCAACGTGGAGGCC...CCCATGTGAAGTGGTAGTGCGGTGCCTTTCCCCCAGATCATGCTTTAATTCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TATTGCTCCCTTGTGGGTGGGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCCTCTTCTTCCATGAATaGAGCTTCCGCCTGACAGCC +
Preference number: 4 (lower is better)
Translates to: YCSLVGGRAEYLGRTHHSLFFHE*SFRLTA
Trigger: GGCTGTCAGGCGGAAGCTGCATTCATGGAAGAAGAG...GCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TATTGCTCCCTTGTGGGTGGGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCCACATTTGTCAGTGCTaGCCTCGAGAGCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: YCSLVGGRAEYLGRTHHSHICQC*PRELAP
Trigger: TGGAGCAAGCTCTCGAGGGCAGCACTGACAAATGTG...GCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp GAATCAGACTGGAAAGCAAGTCAGTACTTCAGAGTAGCCCCGCAGAAAAAGAGCGGAGGGGTCACGCTCTaGATCAGGCCGGTGTCCACG +
Preference number: 4 (lower is better)
Translates to: ESDWKASQYFRVAPQKKSGGVTL*IRPVST
Trigger: CGTGGACACCGGCCTGATGCAGAGCGTGACCCCTCC...GCTCTTTTTCTGCGGGGCTACTCTGAAGTACTGACTTGCTTTCCAGTCTGATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAGATACTAGAGACACACAGCTCCTGGCTGTCGTaGTGGTGGAGGGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: CLPYRDQCISCVEILETHSSWLS*WWRGWW
Trigger: CCACCACCCCCTCCACCACCACGACAGCCAGGAGCT...GTGTGTCTCTAGTATCTCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp ATCACTCTGGAGCTGAGAATATCCTTCTCCCCACATCTAACCCGTGGGCAGAATCACTCGGTGTGTGGGTaGAGGTGGGGGAGTCGTCAG +
Preference number: 4 (lower is better)
Translates to: ITLELRISFSPHLTRGQNHSVCG*RWGSRQ
Trigger: CTGACGACTCCCCCACCTCCACCCACACACCGAGTG...ATTCTGCCCACGGGTTAGATGTGGGGAGAAGGATATTCTCAGCTCCAGAGTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CAA 72 bp GGGCAGGAGCCTCAGCCTACAACTATGTTCCAGCACTaGCCACAGAAAACTTTGTGGTGGGGCAGAACCAGG +
Preference number: 4 (lower is better)
Translates to: GQEPQPTTMFQH*PQKTLWWGRTR
Trigger: CCTGGTTCTGCCCCACCACAAAGTTTTCTGTGGCAAGTGCTGGAACATAGTTGTAGGCTGAGGCTCCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TGGACAGCTGCACTGTCACCTGAAGGCGGCCTCTTCCCCAAAGCCAGGCGGCTGGTTCTAGCCAGATTCTaGAGATGTTGTCTAAATGCT +
Preference number: 4 (lower is better)
Translates to: WTAALSPEGGLFPKARRLVLARF*RCCLNA
Trigger: AGCATTTAGACAACATCTTCAGAATCTGGCTAGAAC...CAGCCGCCTGGCTTTGGGGAAGAGGCCGCCTTCAGGTGACAGTGCAGCTGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TTGCACTTTTTGCCGAACGAAATTTTTACCTCACGTTCATCTCACCAAAGTCTCGCAAGGTCCTGGAGCTaGGGAGCCGCCGGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: LHFLPNEIFTSRSSHQSLARSWS*GAAGAR
Trigger: CCTGGCGCCGGCGGCTCCTCAGCTCCAGGACCTTGC...GAGACTTTGGTGAGATGAACGTGAGGTAAAAATTTCGTTCGGCAAAAAGTGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp ATCACTCTGGAGCTGAGAATATCCTTCTCCCCACATCTAACCCGTGGGCAGAATACCCAGGGCACCTTCTaGAGGGGTGTGTCACCTGCT +
Preference number: 4 (lower is better)
Translates to: ITLELRISFSPHLTRGQNTQGTF*RGVSPA
Trigger: AGCAGGTGACACACCCCTTCAGAAGGTGCCCTGGGT...ATTCTGCCCACGGGTTAGATGTGGGGAGAAGGATATTCTCAGCTCCAGAGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TGTGTGGGTGGAGGTGGGGGAGTCGTCAGTCTTATGATGAGTCTCTTCTGCTGGGAGCAAACACCTGACTaGCCAACAGAACCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: CVGGGGGVVSLMMSLFCWEQTPD*PTEPVS
Trigger: GGAGACTGGTTCTGTTGGTCAGTCAGGTGTTTGCTC...CCAGCAGAAGAGACTCATCATAAGACTGACGACTCCCCCACCTCCACCCACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp ATCACTCTGGAGCTGAGAATATCCTTCTCCCCACATCTAACCCGTGGGCAGAATGTCTTGGTGATCCGGTaGCGCCCCAGCTTCACCACA +
Preference number: 4 (lower is better)
Translates to: ITLELRISFSPHLTRGQNVLVIR*RPSFTT
Trigger: TGTGGTGAAGCTGGGGCGGCACCGGATCACCAAGAC...ATTCTGCCCACGGGTTAGATGTGGGGAGAAGGATATTCTCAGCTCCAGAGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp GAATCAGACTGGAAAGCAAGTCAGTACTTCAGAGTAGCCCCGCAGAAAAAGAGCCTGGAGGGGGCCTCTTaGAGTCCTGGGCTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: ESDWKASQYFRVAPQKKSLEGAS*SPGLLG
Trigger: TCCCAGAAGCCCAGGACTGCAAGAGGCCCCCTCCAG...GCTCTTTTTCTGCGGGGCTACTCTGAAGTACTGACTTGCTTTCCAGTCTGATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TGTGTGGGTGGAGGTGGGGGAGTCGTCAGTCTTATGATGAGTCTCTTCTGCTGGGTGTCCACGAGAAACTaGAGGAAGAGCCTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: CVGGGGGVVSLMMSLFCWVSTRN*RKSLSS
Trigger: GGAAGACAGGCTCTTCCTGCAGTTTCTCGTGGACAC...CCAGCAGAAGAGACTCATCATAAGACTGACGACTCCCCCACCTCCACCCACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGATGGGTCTGCGAGCACTaGTGCCGCCTGGTTCTCTAT +
Preference number: 4 (lower is better)
Translates to: CRANMLFALQGPVYQLRGWVCEH*CRLVLY
Trigger: ATAGAGAACCAGGCGGCAGCAGTGCTCGCAGACCCA...TCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAGATACTAGAGACACACTCCTGGGGTGGAATCTaGTGGCCTGCAGTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: CLPYRDQCISCVEILETHSWGGI*WPAVVA
Trigger: GGCCACCACTGCAGGCCAGCAGATTCCACCCCAGGA...GTGTGTCTCTAGTATCTCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp GCTGAAAGGCAGGCGGGTCTGCGGGGTTTTTGTCTCCCTCAGCCTGGTTCAGTGGCCAGAATTTTCGCCTaGCTTCAGACTCATTTAACC +
Preference number: 4 (lower is better)
Translates to: AERQAGLRGFCLPQPGSVARIFA*LQTHLT
Trigger: GGTTAAATGAGTCTGAAGCCAGGCGAAAATTCTGGC...CACTGAACCAGGCTGAGGGAGACAAAAACCCCGCAGACCCGCCTGCCTTTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp AAAGAATTAAAGCATGATCTGGGGGAAAGGCACCGCACTACCACTTCACATGGGGTGCTAGGCCGACGCTaGCGGCCATCAAGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: KELKHDLGERHRTTTSHGVLGRR*RPSSLC
Trigger: GCAGAGACTTGATGGCCGCCAGCGTCGGCCTAGCAC...CCCATGTGAAGTGGTAGTGCGGTGCCTTTCCCCCAGATCATGCTTTAATTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp GAATCAGACTGGAAAGCAAGTCAGTACTTCAGAGTAGCCCCGCAGAAAAAGAGCTCCACGTTGGATGCCTaGGGGAGGAGGGCAGATCGC +
Preference number: 4 (lower is better)
Translates to: ESDWKASQYFRVAPQKKSSTLDA*GRRADR
Trigger: GCGATCTGCCCTCCTCCCCCAGGCATCCAACGTGGA...GCTCTTTTTCTGCGGGGCTACTCTGAAGTACTGACTTGCTTTCCAGTCTGATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp GGGCTCGCATGGCCAGAATGGAACCCCCTAGACTTTCCACACGTCACCTGCCTGAATGCTACAATTCCCTaGGTGAGGGAGGTATCTGAT +
Preference number: 4 (lower is better)
Translates to: GLAWPEWNPLDFPHVTCLNATIP*VREVSD
Trigger: ATCAGATACCTCCCTCACCCAGGGAATTGTAGCATT...CAGGCAGGTGACGTGTGGAAAGTCTAGGGGGTTCCATTCTGGCCATGCGAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TATTGCTCCCTTGTGGGTGGGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCGATGAAGGCGGTTTCTaGGGTCAGTACCAGCTGTTA +
Preference number: 4 (lower is better)
Translates to: YCSLVGGRAEYLGRTHHSDEGGF*GQYQLL
Trigger: TAACAGCTGGTACTGACCCCAGAAACCGCCTTCATC...GCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGACAGTCCCTCATCGGCTaGCCTAACCGTCCTGCCATA +
Preference number: 4 (lower is better)
Translates to: CRANMLFALQGPVYQLRGQSLIG*PNRPAI
Trigger: TATGGCAGGACGGTTAGGCCAGCCGATGAGGGACTG...TCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TGGGCCCCCTCTTCCTGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGGATTCTCAAGGTGGATaGTGTAGAGAACCATCAGCC +
Preference number: 4 (lower is better)
Translates to: WAPSSCRANMLFALQGPVDSQGG*CREPSA
Trigger: GGCTGATGGTTCTCTACACCATCCACCTTGAGAATC...CACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACAGGAAGAGGGGGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TATTGCTCCCTTGTGGGTGGGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCAATGTGAGAGGCTACTaGAAGGTGAGAGGCTCCACT +
Preference number: 4 (lower is better)
Translates to: YCSLVGGRAEYLGRTHHSNVRGY*KVRGST
Trigger: AGTGGAGCCTCTCACCTTCCAGTAGCCTCTCACATT...GCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGATTGCTCCCTTGTGGGTaGGCGAGCAGAGTATCTGGG +
Preference number: 4 (lower is better)
Translates to: CRANMLFALQGPVYQLRGLLPCG*ASRVSG
Trigger: CCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAA...TCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TGGGCCCCCTCTTCCTGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGTTCTCTTACCACCCATaGTGGAAAGGTCTCACCACT +
Preference number: 4 (lower is better)
Translates to: WAPSSCRANMLFALQGPVFSYHP*WKGLTT
Trigger: AGTGGTGAGACCTTTCCACCATGGGTGGTAAGAGAA...CACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACAGGAAGAGGGGGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CAA 72 bp TCTGTGCCCCAGTGTGTGCCTGAGTCTGCTGATAGGTaGAAACCTGCCTGGAGAAGATGTGGACACAAGGTG +
Preference number: 4 (lower is better)
Translates to: SVPQCVPESADR*KPAWRRCGHKV
Trigger: CACCTTGTGTCCACATCTTCTCCAGGCAGGTTTCAACCTATCAGCAGACTCAGGCACACACTGGGGCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAGATACTAGAGACACACAATGCCTCAAAGGCATaGGCGGGGTCTTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: CLPYRDQCISCVEILETHNASKA*AGSSSA
Trigger: GGCCGAGGAAGACCCCGCTCATGCCTTTGAGGCATT...GTGTGTCTCTAGTATCTCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp GAATCAGACTGGAAAGCAAGTCAGTACTTCAGAGTAGCCCCGCAGAAAAAGAGCCTCTGCGGCCCTCTCTaGAGCTCACTGGAGACCTGT +
Preference number: 4 (lower is better)
Translates to: ESDWKASQYFRVAPQKKSLCGPL*SSLETC
Trigger: ACAGGTCTCCAGTGAGCTTCAGAGAGGGCCGCAGAG...GCTCTTTTTCTGCGGGGCTACTCTGAAGTACTGACTTGCTTTCCAGTCTGATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGACTCATGTTCGGTGAATaGATGGTCACTGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: CRANMLFALQGPVYQLRGLMFGE*MVTGSP
Trigger: GGGGCTCCCAGTGACCATGCATTCACCGAACATGAG...TCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp GAATCAGACTGGAAAGCAAGTCAGTACTTCAGAGTAGCCCCGCAGAAAAAGAGCTGTTCCTGCAGCTGCTaGTCAAGGCTCCGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: ESDWKASQYFRVAPQKKSCSCSC*SRLRGG
Trigger: ACCACCGCGGAGCCTTGAGCAGCAGCTGCAGGAACA...GCTCTTTTTCTGCGGGGCTACTCTGAAGTACTGACTTGCTTTCCAGTCTGATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TGTGTGGGTGGAGGTGGGGGAGTCGTCAGTCTTATGATGAGTCTCTTCTGCTGGGAACACATTTGTCAGTaGTGCCCTCGAGAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: CVGGGGGVVSLMMSLFCWEHICQ*CPRELA
Trigger: AGCAAGCTCTCGAGGGCAGCACTGACAAATGTGTTC...CCAGCAGAAGAGACTCATCATAAGACTGACGACTCCCCCACCTCCACCCACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TGGGCCCCCTCTTCCTGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGTTTCCACACGTCACCTaGCTGAACGCTAACTACAAA +
Preference number: 4 (lower is better)
Translates to: WAPSSCRANMLFALQGPVFPHVT*LNANYK
Trigger: TTTGTAGTTAGCGTTCAGGCAGGTGACGTGTGGAAA...CACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACAGGAAGAGGGGGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp ATCACTCTGGAGCTGAGAATATCCTTCTCCCCACATCTAACCCGTGGGCAGAATGTCTGCGAGCACTGCTaGCGCCTGGTTCTCTATCTG +
Preference number: 4 (lower is better)
Translates to: ITLELRISFSPHLTRGQNVCEHC*RLVLYL
Trigger: CAGATAGAGAACCAGGCGGCAGCAGTGCTCGCAGAC...ATTCTGCCCACGGGTTAGATGTGGGGAGAAGGATATTCTCAGCTCCAGAGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp GAATCAGACTGGAAAGCAAGTCAGTACTTCAGAGTAGCCCCGCAGAAAAAGAGCGGCCTCTTGCAGTCCTaGGCTTCTGGGACAGTCTGG +
Preference number: 4 (lower is better)
Translates to: ESDWKASQYFRVAPQKKSGLLQS*ASGTVW
Trigger: CCAGACTGTCCCAGAAGCCCAGGACTGCAAGAGGCC...GCTCTTTTTCTGCGGGGCTACTCTGAAGTACTGACTTGCTTTCCAGTCTGATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp CAAACCTTTCTCTCCACTTCTTTCCCCTTCAGAGATTTTGGTGAAGGCAGGTTTCCCCTGCCTCCACGGTaGCGGGTCTCCTGTCAGTTC +
Preference number: 4 (lower is better)
Translates to: QTFLSTSFPFRDFGEGRFPLPPR*RVSCQF
Trigger: GAACTGACAGGAGACCCGCCACCGTGGAGGCAGGGG...AAACCTGCCTTCACCAAAATCTCTGAAGGGGAAAGAAGTGGAGAGAAAGGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp ATCACTCTGGAGCTGAGAATATCCTTCTCCCCACATCTAACCCGTGGGCAGAATAGACAACAGGTACCCTaGAGACCGACTGCCCGCAAG +
Preference number: 4 (lower is better)
Translates to: ITLELRISFSPHLTRGQNRQQVP*RPTARK
Trigger: CTTGCGGGCAGTCGGTCTCCAGGGTACCTGTTGTCT...ATTCTGCCCACGGGTTAGATGTGGGGAGAAGGATATTCTCAGCTCCAGAGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAACAAGAGGCAAGGGCTaGCTTCAGTCTTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: CRANMLFALQGPVYQLRGTRGKG*LQSWAP
Trigger: AGGAGCCCAAGACTGAAGCCAGCCCTTGCCTCTTGT...TCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp AAAGAATTAAAGCATGATCTGGGGGAAAGGCACCGCACTACCACTTCACATGGGGGTGTTCTGGGCCTTTaGCAGAAGGCTGGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: KELKHDLGERHRTTTSHGGVLGL*QKAGLL
Trigger: CAGAAGCCCAGCCTTCTGTCAAAGGCCCAGAACACC...CCCATGTGAAGTGGTAGTGCGGTGCCTTTCCCCCAGATCATGCTTTAATTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp CAAACCTTTCTCTCCACTTCTTTCCCCTTCAGAGATTTTGGTGAAGGCAGGTTTCCCAGCCAGACCCTCTaGTTCCAGTTGGGTGGCTCG +
Preference number: 4 (lower is better)
Translates to: QTFLSTSFPFRDFGEGRFPSQTL*FQLGGS
Trigger: CGAGCCACCCAACTGGAATCAGAGGGTCTGGCTGGG...AAACCTGCCTTCACCAAAATCTCTGAAGGGGAAAGAAGTGGAGAGAAAGGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp GAATCAGACTGGAAAGCAAGTCAGTACTTCAGAGTAGCCCCGCAGAAAAAGAGCTGCCCCACTGCTTTGTaGTGGCCTTGGGGGACAACT +
Preference number: 4 (lower is better)
Translates to: ESDWKASQYFRVAPQKKSCPTAL*WPWGTT
Trigger: AGTTGTCCCCCAAGGCCATCACAAAGCAGTGGGGCA...GCTCTTTTTCTGCGGGGCTACTCTGAAGTACTGACTTGCTTTCCAGTCTGATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp GGGCTCGCATGGCCAGAATGGAACCCCCTAGACTTTCCACACGTCACCTGCCTGGTGGAAAACAAACTCTaGAGTGACTTTGGATTTAGC +
Preference number: 4 (lower is better)
Translates to: GLAWPEWNPLDFPHVTCLVENKL*SDFGFS
Trigger: GCTAAATCCAAAGTCACTTCAGAGTTTGTTTTCCAC...CAGGCAGGTGACGTGTGGAAAGTCTAGGGGGTTCCATTCTGGCCATGCGAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGACACACGTCACCTGCCTaGACGCTAACTACAAAGAGG +
Preference number: 4 (lower is better)
Translates to: CRANMLFALQGPVYQLRGHTSPA*TLTTKR
Trigger: CCTCTTTGTAGTTAGCGTTCAGGCAGGTGACGTGTG...TCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp GAATCAGACTGGAAAGCAAGTCAGTACTTCAGAGTAGCCCCGCAGAAAAAGAGCCACCAAGTCCAACCGTaGGCACAGTGCCTCTGCGAA +
Preference number: 4 (lower is better)
Translates to: ESDWKASQYFRVAPQKKSHQVQP*AQCLCE
Trigger: TTCGCAGAGGCACTGTGCTCACGGTTGGACTTGGTG...GCTCTTTTTCTGCGGGGCTACTCTGAAGTACTGACTTGCTTTCCAGTCTGATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp CGAAGGGCAGGAGCCTCAGCCTACAACTATGTTCCAGCACTTGCCACAGAAAACCCATTCCTGCAGTTCTaGAATGAGTGGCCCCCATTT +
Preference number: 4 (lower is better)
Translates to: RRAGASAYNYVPALATENPFLQF*NEWPPF
Trigger: AAATGGGGGCCACTCATTTCAGAACTGCAGGAATGG...GTTTTCTGTGGCAAGTGCTGGAACATAGTTGTAGGCTGAGGCTCCTGCCCTTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAGAGGTTGCAGTGAGCTaGAATCACGCCACTGCATTC +
Preference number: 4 (lower is better)
Translates to: CRANMLFALQGPVYQLRGEVAVS*NHATAF
Trigger: GAATGCAGTGGCGTGATTTCAGCTCACTGCAACCTC...TCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAGATACTAGAGACACACGGTGGGTGGGTCACCTaGGGTCAGGAGTTCAAGATC +
Preference number: 4 (lower is better)
Translates to: CLPYRDQCISCVEILETHGGWVT*GQEFKI
Trigger: GATCTTGAACTCCTGACCTCAGGTGACCCACCCACC...GTGTGTCTCTAGTATCTCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAGATACTAGAGACACACCGGCCCCTTGGCAATTaGGGAAGGGGGTGTTCTGTA +
Preference number: 4 (lower is better)
Translates to: CLPYRDQCISCVEILETHRPLGN*GRGCSV
Trigger: TACAGAACACCCCCTTCCTCAATTGCCAAGGGGCCG...GTGTGTCTCTAGTATCTCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp CGAAGGGCAGGAGCCTCAGCCTACAACTATGTTCCAGCACTTGCCACAGAAAACGCTGCCACACCATGTTaGCAGCAGTTCACCACTTTT +
Preference number: 4 (lower is better)
Translates to: RRAGASAYNYVPALATENAATPC*QQFTTF
Trigger: AAAAGTGGTGAACTGCTGGCAACATGGTGTGGCAGC...GTTTTCTGTGGCAAGTGCTGGAACATAGTTGTAGGCTGAGGCTCCTGCCCTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAAGGTCTCCATCATGTTaGTGGGCAGTGACTGGCATC +
Preference number: 4 (lower is better)
Translates to: CRANMLFALQGPVYQLRGRSPSC*WAVTGI
Trigger: GATGCCAGTCACTGCCCAGCAACATGATGGAGACCT...TCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp AAAGAATTAAAGCATGATCTGGGGGAAAGGCACCGCACTACCACTTCACATGGGACTTCTGACAGAGTGTaGCGTCTCTGCCCGCTGCGT +
Preference number: 4 (lower is better)
Translates to: KELKHDLGERHRTTTSHGTSDRV*RLCPLR
Trigger: ACGCAGCGGGCAGAGACGGCACACTCTGTCAGAAGT...CCCATGTGAAGTGGTAGTGCGGTGCCTTTCCCCCAGATCATGCTTTAATTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAGATACTAGAGACACACTGGGAGCTCAGAGCCTaGATGGCTGGGTTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: CLPYRDQCISCVEILETHWELRA*MAGLVG
Trigger: ACCTACCAACCCAGCCATGCAGGCTCTGAGCTCCCA...GTGTGTCTCTAGTATCTCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp GAATCAGACTGGAAAGCAAGTCAGTACTTCAGAGTAGCCCCGCAGAAAAAGAGCCTATGTTCCTGCAGCTaGTGCTCAAGGCTCCGCGGT +
Preference number: 4 (lower is better)
Translates to: ESDWKASQYFRVAPQKKSLCSCS*CSRLRG
Trigger: ACCGCGGAGCCTTGAGCAGCAGCTGCAGGAACATAG...GCTCTTTTTCTGCGGGGCTACTCTGAAGTACTGACTTGCTTTCCAGTCTGATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TTTTATTTCTCAAACTGCAGTCCCCGAAGTGAAGCAAACCTTTCTCTCCACTTCGGTGGCGGCTGCTGCTaGTGTAGCTGCGTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: FYFSNCSPRSEANLSLHFGGGCC*CSCVGR
Trigger: TCTGCCCACGCAGCTACAGCAGCAGCAGCCGCCACC...GAAGTGGAGAGAAAGGTTTGCTTCACTTCGGGGACTGCAGTTTGAGAAATAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp CGAAGGGCAGGAGCCTCAGCCTACAACTATGTTCCAGCACTTGCCACAGAAAACAAGGGGTGTGTCACCTaGTTCCGAATGGAGATGAAG +
Preference number: 4 (lower is better)
Translates to: RRAGASAYNYVPALATENKGCVT*FRMEMK
Trigger: CTTCATCTCCATTCGGAAGCAGGTGACACACCCCTT...GTTTTCTGTGGCAAGTGCTGGAACATAGTTGTAGGCTGAGGCTCCTGCCCTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAGATACTAGAGACACACCCTGATAGGCCTGGCTaGTGTAGGGCACCTCTCGAT +
Preference number: 4 (lower is better)
Translates to: CLPYRDQCISCVEILETHPDRPG*CRAPLD
Trigger: ATCGAGAGGTGCCCTACAGCAGCCAGGCCTATCAGG...GTGTGTCTCTAGTATCTCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TGGGCCCCCTCTTCCTGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGCTCAGCAGCTTACATTaGAGTCAATACAGAGGGTTA +
Preference number: 4 (lower is better)
Translates to: WAPSSCRANMLFALQGPVLSSLH*SQYRGL
Trigger: TAACCCTCTGTATTGACTGCAATGTAAGCTGCTGAG...CACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACAGGAAGAGGGGGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TATTGCTCCCTTGTGGGTGGGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCGACCAGTGTATCAGTTaGGTGGAGATACTAGAGACA +
Preference number: 4 (lower is better)
Translates to: YCSLVGGRAEYLGRTHHSDQCIS*VEILET
Trigger: TGTCTCTAGTATCTCCACGCAACTGATACACTGGTC...GCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TGTGTGGGTGGAGGTGGGGGAGTCGTCAGTCTTATGATGAGTCTCTTCTGCTGGTGCTGCTTGTCACCTTaGCTTAGTTTCTGGCTGATC +
Preference number: 4 (lower is better)
Translates to: CVGGGGGVVSLMMSLFCWCCLSP*LSFWLI
Trigger: GATCAGCCAGAAACTAAGGCAAGGTGACAAGCAGCA...CCAGCAGAAGAGACTCATCATAAGACTGACGACTCCCCCACCTCCACCCACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGACACTCACTGTGTCCTTaGATCCTCAACTGCCCGCAT +
Preference number: 4 (lower is better)
Translates to: CRANMLFALQGPVYQLRGHSLCP*ILNCPH
Trigger: ATGCGGGCAGTTGAGGATGCAAGGACACAGTGAGTG...TCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp ATCACTCTGGAGCTGAGAATATCCTTCTCCCCACATCTAACCCGTGGGCAGAATAGAAGGCTGGGCTTCTaGAGTCTGTGCTGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: ITLELRISFSPHLTRGQNRRLGF*SLCCRY
Trigger: GTACCTGCAGCACAGACTCCAGAAGCCCAGCCTTCT...ATTCTGCCCACGGGTTAGATGTGGGGAGAAGGATATTCTCAGCTCCAGAGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp CAAACCTTTCTCTCCACTTCTTTCCCCTTCAGAGATTTTGGTGAAGGCAGGTTTGTAGCAGGTCAGCCCTaGCACCGGTGTCAGCCACTG +
Preference number: 4 (lower is better)
Translates to: QTFLSTSFPFRDFGEGRFVAGQP*HRCQPL
Trigger: CAGTGGCTGACACCGGTGCCAGGGCTGACCTGCTAC...AAACCTGCCTTCACCAAAATCTCTGAAGGGGAAAGAAGTGGAGAGAAAGGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp ATCACTCTGGAGCTGAGAATATCCTTCTCCCCACATCTAACCCGTGGGCAGAATGTTCATGACCGTTCCTaGGGTGGAATCTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: ITLELRISFSPHLTRGQNVHDRS*GGICWP
Trigger: AGGCCAGCAGATTCCACCCCAGGAACGGTCATGAAC...ATTCTGCCCACGGGTTAGATGTGGGGAGAAGGATATTCTCAGCTCCAGAGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp GCTGAAAGGCAGGCGGGTCTGCGGGGTTTTTGTCTCCCTCAGCCTGGTTCAGTGTTCACTGCATCCAGCTaGGACTTATCGATTATTTTT +
Preference number: 4 (lower is better)
Translates to: AERQAGLRGFCLPQPGSVFTASS*DLSIIF
Trigger: AAAAATAATCGATAAGTCTCAGCTGGATGCAGTGAA...CACTGAACCAGGCTGAGGGAGACAAAAACCCCGCAGACCCGCCTGCCTTTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TGTGTGGGTGGAGGTGGGGGAGTCGTCAGTCTTATGATGAGTCTCTTCTGCTGGTCAATGGTTTTCTGCTaGTCTATTCCAAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: CVGGGGGVVSLMMSLFCWSMVFC*SIPRLC
Trigger: GCACAGCCTTGGAATAGATCAGCAGAAAACCATTGA...CCAGCAGAAGAGACTCATCATAAGACTGACGACTCCCCCACCTCCACCCACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAGATACTAGAGACACACGCTTCCGAATGGAGATaGAGGCGGTTTCTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: CLPYRDQCISCVEILETHASEWR*RRFLGS
Trigger: TGACCCCAGAAACCGCCTTCATCTCCATTCGGAAGC...GTGTGTCTCTAGTATCTCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGACAGGGCTGGTGCTCTTaGTGCGTTCTTGAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: CRANMLFALQGPVYQLRGQGWCS*CVLEFL
Trigger: AAGAAACTCAAGAACGCATCAAGAGCACCAGCCCTG...TCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp CAAACCTTTCTCTCCACTTCTTTCCCCTTCAGAGATTTTGGTGAAGGCAGGTTTGCCTGGGACCAACTGTaGCTCCAGGCTGCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: QTFLSTSFPFRDFGEGRFAWDQL*LQAAAC
Trigger: ACAAGCAGCAGCCTGGAGTCACAGTTGGTCCCAGGC...AAACCTGCCTTCACCAAAATCTCTGAAGGGGAAAGAAGTGGAGAGAAAGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp CGAAGGGCAGGAGCCTCAGCCTACAACTATGTTCCAGCACTTGCCACAGAAAACAGTCTGCTGATAGGTTaGAACCTGCCTGGAGAAGAT +
Preference number: 4 (lower is better)
Translates to: RRAGASAYNYVPALATENSLLIG*NLPGED
Trigger: ATCTTCTCCAGGCAGGTTTCAACCTATCAGCAGACT...GTTTTCTGTGGCAAGTGCTGGAACATAGTTGTAGGCTGAGGCTCCTGCCCTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp GCTGAAAGGCAGGCGGGTCTGCGGGGTTTTTGTCTCCCTCAGCCTGGTTCAGTGTTCATAGAATTGTTGTaGGGGTTAGAAGAGAAAGTG +
Preference number: 4 (lower is better)
Translates to: AERQAGLRGFCLPQPGSVFIELL*GLEEKV
Trigger: CACTTTCTCTTCTAACCCTCACAACAATTCTATGAA...CACTGAACCAGGCTGAGGGAGACAAAAACCCCGCAGACCCGCCTGCCTTTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp GGGCTCGCATGGCCAGAATGGAACCCCCTAGACTTTCCACACGTCACCTGCCTGTGGTTTCTTCAGCTGTaGAAAATAAGGACAGTATCT +
Preference number: 4 (lower is better)
Translates to: GLAWPEWNPLDFPHVTCLWFLQL*KIRTVS
Trigger: AGATACTGTCCTTATTTTTCACAGCTGAAGAAACCA...CAGGCAGGTGACGTGTGGAAAGTCTAGGGGGTTCCATTCTGGCCATGCGAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TGTGTGGGTGGAGGTGGGGGAGTCGTCAGTCTTATGATGAGTCTCTTCTGCTGGATAAGCACTTCTAGTTaGTGGGGCTTGACTGTAAGG +
Preference number: 4 (lower is better)
Translates to: CVGGGGGVVSLMMSLFCWISTSS*WGLTVR
Trigger: CCTTACAGTCAAGCCCCATCAACTAGAAGTGCTTAT...CCAGCAGAAGAGACTCATCATAAGACTGACGACTCCCCCACCTCCACCCACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TGTGTGGGTGGAGGTGGGGGAGTCGTCAGTCTTATGATGAGTCTCTTCTGCTGGCTTCAGAGATTTTGGTaGAGGCAGGTTTCTCTTACC +
Preference number: 4 (lower is better)
Translates to: CVGGGGGVVSLMMSLFCWLQRFW*RQVSLT
Trigger: GGTAAGAGAAACCTGCCTTCACCAAAATCTCTGAAG...CCAGCAGAAGAGACTCATCATAAGACTGACGACTCCCCCACCTCCACCCACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGATCTATTCCAAGGCTGTaGATCAGTCGCAGAACCTGC +
Preference number: 4 (lower is better)
Translates to: CRANMLFALQGPVYQLRGSIPRL*ISRRTC
Trigger: GCAGGTTCTGCGACTGATGCACAGCCTTGGAATAGA...TCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp GAATCAGACTGGAAAGCAAGTCAGTACTTCAGAGTAGCCCCGCAGAAAAAGAGCCGCCAGGTTAGGGTCTaGCTCCGGTCCTATTTGTTC +
Preference number: 4 (lower is better)
Translates to: ESDWKASQYFRVAPQKKSRQVRV*LRSYLF
Trigger: GAACAAATAGGACCGGAGGCAGACCCTAACCTGGCG...GCTCTTTTTCTGCGGGGCTACTCTGAAGTACTGACTTGCTTTCCAGTCTGATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAGATACTAGAGACACACCTGCTTTCGTTCACCTaGCACCAAGGGCCAGACAAG +
Preference number: 4 (lower is better)
Translates to: CLPYRDQCISCVEILETHLLSFT*HQGPDK
Trigger: CTTGTCTGGCCCTTGGTGGCAGGTGAACGAAAGCAG...GTGTGTCTCTAGTATCTCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp CAAACCTTTCTCTCCACTTCTTTCCCCTTCAGAGATTTTGGTGAAGGCAGGTTTTTGCTGGGCAGTGACTaGCATCCCTTCCGCACCAGG +
Preference number: 4 (lower is better)
Translates to: QTFLSTSFPFRDFGEGRFLLGSD*HPFRTR
Trigger: CCTGGTGCGGAAGGGATGCCAGTCACTGCCCAGCAA...AAACCTGCCTTCACCAAAATCTCTGAAGGGGAAAGAAGTGGAGAGAAAGGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp AAAGAATTAAAGCATGATCTGGGGGAAAGGCACCGCACTACCACTTCACATGGGTCTGCCCGCTGCGTGTaGACTGAAATGCCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: KELKHDLGERHRTTTSHGSARCV*TEMPQR
Trigger: CCTTTGAGGCATTTCAGTCCACACGCAGCGGGCAGA...CCCATGTGAAGTGGTAGTGCGGTGCCTTTCCCCCAGATCATGCTTTAATTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp ATCACTCTGGAGCTGAGAATATCCTTCTCCCCACATCTAACCCGTGGGCAGAATAAGAGTCGCTTCTGCTaGAGCCTATGTTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ITLELRISFSPHLTRGQNKSRFC*SLCSCS
Trigger: GCTGCAGGAACATAGGCTCCAGCAGAAGCGACTCTT...ATTCTGCCCACGGGTTAGATGTGGGGAGAAGGATATTCTCAGCTCCAGAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TTGCACTTTTTGCCGAACGAAATTTTTACCTCACGTTCATCTCACCAAAGTCTCGGTCAGGCTGAACGGTaGGGCCTGCTGAGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: LHFLPNEIFTSRSSHQSLGQAER*GLLRRR
Trigger: CCGCCTTCTCAGCAGGCCCCACCGTTCAGCCTGACC...GAGACTTTGGTGAGATGAACGTGAGGTAAAAATTTCGTTCGGCAAAAAGTGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TATTGCTCCCTTGTGGGTGGGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCCCTTGTAGCAATATGTaGTTGCTCAGCTTCAGTGAA +
Preference number: 4 (lower is better)
Translates to: YCSLVGGRAEYLGRTHHSPCSNM*LLSFSE
Trigger: TTCACTGAAGCTGAGCAACCACATATTGCTACAAGG...GCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp AAAGAATTAAAGCATGATCTGGGGGAAAGGCACCGCACTACCACTTCACATGGGGTGTGTGGGTGGAGGTaGGGGAGTCGTCAGTCTTAT +
Preference number: 4 (lower is better)
Translates to: KELKHDLGERHRTTTSHGVCGWR*GSRQSY
Trigger: ATAAGACTGACGACTCCCCCACCTCCACCCACACAC...CCCATGTGAAGTGGTAGTGCGGTGCCTTTCCCCCAGATCATGCTTTAATTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp CAAACCTTTCTCTCCACTTCTTTCCCCTTCAGAGATTTTGGTGAAGGCAGGTTTCACAAAGAGACCGAGTaGCTCGGGTGGCTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: QTFLSTSFPFRDFGEGRFHKETE*LGWLPR
Trigger: CCTGGGAAGCCACCCGAGCCACTCGGTCTCTTTGTG...AAACCTGCCTTCACCAAAATCTCTGAAGGGGAAAGAAGTGGAGAGAAAGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp GAATCAGACTGGAAAGCAAGTCAGTACTTCAGAGTAGCCCCGCAGAAAAAGAGCGGCGAGCAGAGTATCTaGGCAGAACCCATCACAGCT +
Preference number: 4 (lower is better)
Translates to: ESDWKASQYFRVAPQKKSGEQSI*AEPITA
Trigger: AGCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCC...GCTCTTTTTCTGCGGGGCTACTCTGAAGTACTGACTTGCTTTCCAGTCTGATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp CAAACCTTTCTCTCCACTTCTTTCCCCTTCAGAGATTTTGGTGAAGGCAGGTTTCAGTGCACGGCCACCTaGACAGCTGCACTGTCACCT +
Preference number: 4 (lower is better)
Translates to: QTFLSTSFPFRDFGEGRFQCTAT*TAALSP
Trigger: AGGTGACAGTGCAGCTGTCCAGGTGGCCGTGCACTG...AAACCTGCCTTCACCAAAATCTCTGAAGGGGAAAGAAGTGGAGAGAAAGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp CGAAGGGCAGGAGCCTCAGCCTACAACTATGTTCCAGCACTTGCCACAGAAAACCGCAATCTTCTGACATaGAATACGGAATCCGGAATC +
Preference number: 4 (lower is better)
Translates to: RRAGASAYNYVPALATENRNLLT*NTESGI
Trigger: GATTCCGGATTCCGTATTTCATGTCAGAAGATTGCG...GTTTTCTGTGGCAAGTGCTGGAACATAGTTGTAGGCTGAGGCTCCTGCCCTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp ATCACTCTGGAGCTGAGAATATCCTTCTCCCCACATCTAACCCGTGGGCAGAATTTGATTGGTCACTTCTaGCAGAGTGTGCCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: ITLELRISFSPHLTRGQNLIGHF*QSVPSL
Trigger: CAGAGACGGCACACTCTGTCAGAAGTGACCAATCAA...ATTCTGCCCACGGGTTAGATGTGGGGAGAAGGATATTCTCAGCTCCAGAGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp AAAGAATTAAAGCATGATCTGGGGGAAAGGCACCGCACTACCACTTCACATGGGCTACAATTCCCTGGGTaGGGGAGGTATCTGATGCTC +
Preference number: 4 (lower is better)
Translates to: KELKHDLGERHRTTTSHGLQFPG*GRYLML
Trigger: GAGCATCAGATACCTCCCTCACCCAGGGAATTGTAG...CCCATGTGAAGTGGTAGTGCGGTGCCTTTCCCCCAGATCATGCTTTAATTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp AAAGAATTAAAGCATGATCTGGGGGAAAGGCACCGCACTACCACTTCACATGGGGCCAGACAAGGGCTCTaGCATTACAGGTGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: KELKHDLGERHRTTTSHGARQGL*HYRCFR
Trigger: TCTGAAGCACCTGTAATGTCAGAGCCCTTGTCTGGC...CCCATGTGAAGTGGTAGTGCGGTGCCTTTCCCCCAGATCATGCTTTAATTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAGATACTAGAGACACACGCTCCACTGGGAAACTaGTCCGATGTGATTTCAGGC +
Preference number: 4 (lower is better)
Translates to: CLPYRDQCISCVEILETHAPLGN*SDVISG
Trigger: GCCTGAAATCACATCGGAGCAGTTTCCCAGTGGAGC...GTGTGTCTCTAGTATCTCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TATTGCTCCCTTGTGGGTGGGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCAAGATGTTGTCTAAATaGTACAATTCCCTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: YCSLVGGRAEYLGRTHHSKMLSK*YNSLGE
Trigger: CTCACCCAGGGAATTGTAGCATTTAGACAACATCTT...GCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp GCTGAAAGGCAGGCGGGTCTGCGGGGTTTTTGTCTCCCTCAGCCTGGTTCAGTGTGTTCATACAACAACTaGACTTTGTTCAACTCTAGA +
Preference number: 4 (lower is better)
Translates to: AERQAGLRGFCLPQPGSVCSYNN*TLFNSR
Trigger: TCTAGAGTTGAACAAAGTGCAGTTGTTGTATGAACA...CACTGAACCAGGCTGAGGGAGACAAAAACCCCGCAGACCCGCCTGCCTTTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAGATACTAGAGACACACCCTGTCGGGCTAACATaGTGTTTGCCTTACAGGGAC +
Preference number: 4 (lower is better)
Translates to: CLPYRDQCISCVEILETHPVGLT*CLPYRD
Trigger: GTCCCTGTAAGGCAAACAGCATGTTAGCCCGACAGG...GTGTGTCTCTAGTATCTCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp CAAACCTTTCTCTCCACTTCTTTCCCCTTCAGAGATTTTGGTGAAGGCAGGTTTCCTTGCATCCTCAACTaGCCGCATGTCTCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: QTFLSTSFPFRDFGEGRFPCILN*PHVSRG
Trigger: GCCTCTGGAGACATGCGGGCAGTTGAGGATGCAAGG...AAACCTGCCTTCACCAAAATCTCTGAAGGGGAAAGAAGTGGAGAGAAAGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp CGAAGGGCAGGAGCCTCAGCCTACAACTATGTTCCAGCACTTGCCACAGAAAACACAAATATAAGCTATTaGTCCCTTGTGGGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: RRAGASAYNYVPALATENTNISY*SLVGGR
Trigger: TCGCCCACCCACAAGGGAGCAATAGCTTATATTTGT...GTTTTCTGTGGCAAGTGCTGGAACATAGTTGTAGGCTGAGGCTCCTGCCCTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp ATCACTCTGGAGCTGAGAATATCCTTCTCCCCACATCTAACCCGTGGGCAGAATCCACAGTCTGTGCCTTaGCAACTGTTTGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: ITLELRISFSPHLTRGQNPQSVP*QLFAQQ
Trigger: TTGCTGAGCAAACAGTTGCCAAGGCACAGACTGTGG...ATTCTGCCCACGGGTTAGATGTGGGGAGAAGGATATTCTCAGCTCCAGAGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp AGTACCACACATATTGCACTTTTTGCCGAACGAAATTTTTACCTCACGTTCATCGCTGCTGTAGCTGCGTaGGCAGAGGAGGAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: STTHIALFAERNFYLTFIAAVAA*AEEEQP
Trigger: GGGCTGCTCCTCCTCTGCCCACGCAGCTACAGCAGC...GATGAACGTGAGGTAAAAATTTCGTTCGGCAAAAAGTGCAATATGTGTGGTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp CAAACCTTTCTCTCCACTTCTTTCCCCTTCAGAGATTTTGGTGAAGGCAGGTTTGATACTGACAGGGAGTaGGATAGTCTGGCGCAGGGG +
Preference number: 4 (lower is better)
Translates to: QTFLSTSFPFRDFGEGRFDTDRE*DSLAQG
Trigger: CCCCTGCGCCAGACTATCCCACTCCCTGTCAGTATC...AAACCTGCCTTCACCAAAATCTCTGAAGGGGAAAGAAGTGGAGAGAAAGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAGATACTAGAGACACACCCACAGAAAACTTTGTaGTGGGGCAGAACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: CLPYRDQCISCVEILETHPQKTL*WGRTRR
Trigger: CCTCCTGGTTCTGCCCCACCACAAAGTTTTCTGTGG...GTGTGTCTCTAGTATCTCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TTTTATTTCTCAAACTGCAGTCCCCGAAGTGAAGCAAACCTTTCTCTCCACTTCCATCACAGCTCTCCCTaGGTGGGTCTGCGAGCACTG +
Preference number: 4 (lower is better)
Translates to: FYFSNCSPRSEANLSLHFHHSSP*VGLRAL
Trigger: CAGTGCTCGCAGACCCACCCAGGGAGAGCTGTGATG...GAAGTGGAGAGAAAGGTTTGCTTCACTTCGGGGACTGCAGTTTGAGAAATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CAA 72 bp AACATGCTGTTTGCCTTACAGGGACCAGTGTATCAGTaGCGTGGAGATACTAGAGACACACTTGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: NMLFALQGPVYQ*RGDTRDTLAQL
Trigger: CAGCTGGGCAAGTGTGTCTCTAGTATCTCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACAGCATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TTGCACTTTTTGCCGAACGAAATTTTTACCTCACGTTCATCTCACCAAAGTCTCGGTGAGGGAGGTATCTaGTGCTCTGCGGCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: LHFLPNEIFTSRSSHQSLGEGGI*CSAALS
Trigger: AGAGAGGGCCGCAGAGCATCAGATACCTCCCTCACC...GAGACTTTGGTGAGATGAACGTGAGGTAAAAATTTCGTTCGGCAAAAAGTGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp AAAGAATTAAAGCATGATCTGGGGGAAAGGCACCGCACTACCACTTCACATGGGCTGCACTGGGGAATGTaGCATTATTCCATCTGGGGT +
Preference number: 4 (lower is better)
Translates to: KELKHDLGERHRTTTSHGLHWGM*HYSIWG
Trigger: ACCCCAGATGGAATAATGTCACATTCCCCAGTGCAG...CCCATGTGAAGTGGTAGTGCGGTGCCTTTCCCCCAGATCATGCTTTAATTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp ATCACTCTGGAGCTGAGAATATCCTTCTCCCCACATCTAACCCGTGGGCAGAATACAGCAGACAGGATTTaGCAGAATTTTCGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: ITLELRISFSPHLTRGQNTADRI*QNFRLA
Trigger: AGCCAGGCGAAAATTCTGGCAAATCCTGTCTGCTGT...ATTCTGCCCACGGGTTAGATGTGGGGAGAAGGATATTCTCAGCTCCAGAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp CAAACCTTTCTCTCCACTTCTTTCCCCTTCAGAGATTTTGGTGAAGGCAGGTTTGAGCCCCACAGTCTGTaGCTTGGCAACTGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: QTFLSTSFPFRDFGEGRFEPHSL*LGNCLL
Trigger: GAGCAAACAGTTGCCAAGGCACAGACTGTGGGGCTC...AAACCTGCCTTCACCAAAATCTCTGAAGGGGAAAGAAGTGGAGAGAAAGGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp CAAACCTTTCTCTCCACTTCTTTCCCCTTCAGAGATTTTGGTGAAGGCAGGTTTTGGAGCCTATGTTCCTaGAGCTGCTGCTCAAGGCTC +
Preference number: 4 (lower is better)
Translates to: QTFLSTSFPFRDFGEGRFWSLCS*SCCSRL
Trigger: GAGCCTTGAGCAGCAGCTGCAGGAACATAGGCTCCA...AAACCTGCCTTCACCAAAATCTCTGAAGGGGAAAGAAGTGGAGAGAAAGGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp CAAACCTTTCTCTCCACTTCTTTCCCCTTCAGAGATTTTGGTGAAGGCAGGTTTGCCAGCAACAGGGACTaGTCAAGTTACCGACGTTGG +
Preference number: 4 (lower is better)
Translates to: QTFLSTSFPFRDFGEGRFASNRD*SSYRRW
Trigger: CCAACGTCGGTAACTTGAGCAGTCCCTGTTGCTGGC...AAACCTGCCTTCACCAAAATCTCTGAAGGGGAAAGAAGTGGAGAGAAAGGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TTTTATTTCTCAAACTGCAGTCCCCGAAGTGAAGCAAACCTTTCTCTCCACTTCGGTGAGAGGCTCCACTaGTTTCGTTCACCTGCCACC +
Preference number: 4 (lower is better)
Translates to: FYFSNCSPRSEANLSLHFGERLH*FRSPAT
Trigger: GGTGGCAGGTGAACGAAAGCAGTGGAGCCTCTCACC...GAAGTGGAGAGAAAGGTTTGCTTCACTTCGGGGACTGCAGTTTGAGAAATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAGATACTAGAGACACACCTCAAGGCTCCGCGGTaGTTCTTTGCAATAAAGCTG +
Preference number: 4 (lower is better)
Translates to: CLPYRDQCISCVEILETHLKAPR*FFAIKL
Trigger: CAGCTTTATTGCAAAGAACCACCGCGGAGCCTTGAG...GTGTGTCTCTAGTATCTCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TTTTATTTCTCAAACTGCAGTCCCCGAAGTGAAGCAAACCTTTCTCTCCACTTCGACGTTGGTAGGAGCTaGGCTCGCATGGCCAGAATG +
Preference number: 4 (lower is better)
Translates to: FYFSNCSPRSEANLSLHFDVGRS*ARMARM
Trigger: CATTCTGGCCATGCGAGCCCAGCTCCTACCAACGTC...GAAGTGGAGAGAAAGGTTTGCTTCACTTCGGGGACTGCAGTTTGAGAAATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp AAAGAATTAAAGCATGATCTGGGGGAAAGGCACCGCACTACCACTTCACATGGGAGCTCATGGCATTGTTaGGGGGCAGGAGTTTATGTC +
Preference number: 4 (lower is better)
Translates to: KELKHDLGERHRTTTSHGSSWHC*GAGVYV
Trigger: GACATAAACTCCTGCCCCCCAACAATGCCATGAGCT...CCCATGTGAAGTGGTAGTGCGGTGCCTTTCCCCCAGATCATGCTTTAATTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TATTGCTCCCTTGTGGGTGGGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCTACGGTTTAAACACTTaGGAGTTCTTGATATCTGAG +
Preference number: 4 (lower is better)
Translates to: YCSLVGGRAEYLGRTHHSYGLNT*EFLISE
Trigger: CTCAGATATCAAGAACTCCCAAGTGTTTAAACCGTA...GCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp GAATCAGACTGGAAAGCAAGTCAGTACTTCAGAGTAGCCCCGCAGAAAAAGAGCGGAGATTTTCAGCTTTaGGGTCACGGTGCACAATCT +
Preference number: 4 (lower is better)
Translates to: ESDWKASQYFRVAPQKKSGDFQL*GHGAQS
Trigger: AGATTGTGCACCGTGACCTCAAAGCTGAAAATCTCC...GCTCTTTTTCTGCGGGGCTACTCTGAAGTACTGACTTGCTTTCCAGTCTGATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TTTTATTTCTCAAACTGCAGTCCCCGAAGTGAAGCAAACCTTTCTCTCCACTTCCAGCCTCATGTTCGGTaGATGCATGGTCACTGGGAG +
Preference number: 4 (lower is better)
Translates to: FYFSNCSPRSEANLSLHFQPHVR*MHGHWE
Trigger: CTCCCAGTGACCATGCATTCACCGAACATGAGGCTG...GAAGTGGAGAGAAAGGTTTGCTTCACTTCGGGGACTGCAGTTTGAGAAATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp CAAACCTTTCTCTCCACTTCTTTCCCCTTCAGAGATTTTGGTGAAGGCAGGTTTCTCTTGATGCGTTCTTaGGTTTCTTGCCCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: QTFLSTSFPFRDFGEGRFLLMRS*VSCPLP
Trigger: AGGCAGGGGGCAAGAAACTCAAGAACGCATCAAGAG...AAACCTGCCTTCACCAAAATCTCTGAAGGGGAAAGAAGTGGAGAGAAAGGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp AAAGAATTAAAGCATGATCTGGGGGAAAGGCACCGCACTACCACTTCACATGGGGAAAGAATTAAAGCATaGTCTGGGGGAAAGGCACCG +
Preference number: 4 (lower is better)
Translates to: KELKHDLGERHRTTTSHGERIKA*SGGKAP
Trigger: CGGTGCCTTTCCCCCAGATCATGCTTTAATTCTTTC...CCCATGTGAAGTGGTAGTGCGGTGCCTTTCCCCCAGATCATGCTTTAATTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp AAGTGCTTGGTAAAACTAATGTACAAATATAAGCTATTGCTCCCTTGTGGGTGGTACGAACCTGGGGCTTaGCTAGAGGCTGGAGGACCC +
Preference number: 4 (lower is better)
Translates to: KCLVKLMYKYKLLLPCGWYEPGA*LEAGGP
Trigger: GGGTCCTCCAGCCTCTAGTCAAGCCCCAGGTTCGTA...CCACCCACAAGGGAGCAATAGCTTATATTTGTACATTAGTTTTACCAAGCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGATTTCTCAAGGTTCACTaGATCCAGCTGAGACTTATC +
Preference number: 4 (lower is better)
Translates to: CRANMLFALQGPVYQLRGFLKVH*IQLRLI
Trigger: GATAAGTCTCAGCTGGATGCAGTGAACCTTGAGAAA...TCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAGATACTAGAGACACACATCACATTCACCCTGTaGTTGACCAAAATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: CLPYRDQCISCVEILETHITFTL*LTKMGA
Trigger: AGCCCCCATTTTGGTCAAGCACAGGGTGAATGTGAT...GTGTGTCTCTAGTATCTCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp AAGTGCTTGGTAAAACTAATGTACAAATATAAGCTATTGCTCCCTTGTGGGTGGCCTGATGCCGTGCGATaGGGCCCCTTGGCAATTGAG +
Preference number: 4 (lower is better)
Translates to: KCLVKLMYKYKLLLPCGWPDAVR*GPLAIE
Trigger: CTCAATTGCCAAGGGGCCGCATCGCACGGCATCAGG...CCACCCACAAGGGAGCAATAGCTTATATTTGTACATTAGTTTTACCAAGCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp AAAGAATTAAAGCATGATCTGGGGGAAAGGCACCGCACTACCACTTCACATGGGACAGCCATTGACCTTTaGAGTGTCCACACACTCTTC +
Preference number: 4 (lower is better)
Translates to: KELKHDLGERHRTTTSHGTAIDL*SVHTLF
Trigger: GAAGAGTGTGTGGACACTCCAAAGGTCAATGGCTGT...CCCATGTGAAGTGGTAGTGCGGTGCCTTTCCCCCAGATCATGCTTTAATTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp CAAACCTTTCTCTCCACTTCTTTCCCCTTCAGAGATTTTGGTGAAGGCAGGTTTTCTCCATCATGTTGCTaGGCAGTGACTGGCATCCCT +
Preference number: 4 (lower is better)
Translates to: QTFLSTSFPFRDFGEGRFSPSCC*AVTGIP
Trigger: AGGGATGCCAGTCACTGCCCAGCAACATGATGGAGA...AAACCTGCCTTCACCAAAATCTCTGAAGGGGAAAGAAGTGGAGAGAAAGGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp AAGTGCTTGGTAAAACTAATGTACAAATATAAGCTATTGCTCCCTTGTGGGTGGCTAGTGGGTCGTAGCTaGAGGGGGCCTCTTGCAGTC +
Preference number: 4 (lower is better)
Translates to: KCLVKLMYKYKLLLPCGWLVGRS*RGPLAV
Trigger: GACTGCAAGAGGCCCCCTCCAGCTACGACCCACTAG...CCACCCACAAGGGAGCAATAGCTTATATTTGTACATTAGTTTTACCAAGCACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp ATCACTCTGGAGCTGAGAATATCCTTCTCCCCACATCTAACCCGTGGGCAGAATGAAGAGAAAACTGCTTaGAAGCTTCCATGGGTCACT +
Preference number: 4 (lower is better)
Translates to: ITLELRISFSPHLTRGQNEEKTA*KLPWVT
Trigger: AGTGACCCATGGAAGCTTCCAAGCAGTTTTCTCTTC...ATTCTGCCCACGGGTTAGATGTGGGGAGAAGGATATTCTCAGCTCCAGAGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TTGCACTTTTTGCCGAACGAAATTTTTACCTCACGTTCATCTCACCAAAGTCTCAGCACTGCTGCCGCCTaGTTCTCTATCTGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: LHFLPNEIFTSRSSHQSLSTAAA*FSICAP
Trigger: TGGGGCACAGATAGAGAACCAGGCGGCAGCAGTGCT...GAGACTTTGGTGAGATGAACGTGAGGTAAAAATTTCGTTCGGCAAAAAGTGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TTGCACTTTTTGCCGAACGAAATTTTTACCTCACGTTCATCTCACCAAAGTCTCTTGTCTCCCTCAGCCTaGTTCAGTGCACGGCCACCT +
Preference number: 4 (lower is better)
Translates to: LHFLPNEIFTSRSSHQSLLSPSA*FSARPP
Trigger: AGGTGGCCGTGCACTGAACCAGGCTGAGGGAGACAA...GAGACTTTGGTGAGATGAACGTGAGGTAAAAATTTCGTTCGGCAAAAAGTGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp AAAGAATTAAAGCATGATCTGGGGGAAAGGCACCGCACTACCACTTCACATGGGGGACAGGAACTTCTATaGGCATCCATTTATGCTCCT +
Preference number: 4 (lower is better)
Translates to: KELKHDLGERHRTTTSHGGQELL*ASIYAP
Trigger: AGGAGCATAAATGGATGCTCATAGAAGTTCCTGTCC...CCCATGTGAAGTGGTAGTGCGGTGCCTTTCCCCCAGATCATGCTTTAATTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp CAAACCTTTCTCTCCACTTCTTTCCCCTTCAGAGATTTTGGTGAAGGCAGGTTTGGCATCACGACCAGTTaGTTGGTCACTTCTGACAGA +
Preference number: 4 (lower is better)
Translates to: QTFLSTSFPFRDFGEGRFGITTS*LVTSDR
Trigger: TCTGTCAGAAGTGACCAATCAACTGGTCGTGATGCC...AAACCTGCCTTCACCAAAATCTCTGAAGGGGAAAGAAGTGGAGAGAAAGGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp CAAACCTTTCTCTCCACTTCTTTCCCCTTCAGAGATTTTGGTGAAGGCAGGTTTTCTCTTGGTACTGGCTaGGGAAAGGGCTGTATTGCA +
Preference number: 4 (lower is better)
Translates to: QTFLSTSFPFRDFGEGRFSLGTG*GKGCIA
Trigger: TGCAATACAGCCCTTTCCTCAGCCAGTACCAAGAGA...AAACCTGCCTTCACCAAAATCTCTGAAGGGGAAAGAAGTGGAGAGAAAGGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp CGAAGGGCAGGAGCCTCAGCCTACAACTATGTTCCAGCACTTGCCACAGAAAACGTTGCTCAGCTTCAGTaGAAAATATATTGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: RRAGASAYNYVPALATENVAQLQ*KIYCLF
Trigger: GAAAAGGCAATATATTTTTCACTGAAGCTGAGCAAC...GTTTTCTGTGGCAAGTGCTGGAACATAGTTGTAGGCTGAGGCTCCTGCCCTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp AAAGAATTAAAGCATGATCTGGGGGAAAGGCACCGCACTACCACTTCACATGGGACACTTGGGAGTTCTTaGTATCTGAGGAAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: KELKHDLGERHRTTTSHGTLGSS*YLRKKG
Trigger: CCCTTTCTTCCTCAGATATCAAGAACTCCCAAGTGT...CCCATGTGAAGTGGTAGTGCGGTGCCTTTCCCCCAGATCATGCTTTAATTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAGATACTAGAGACACACCAGGGACTGAGACTGTaGAATGACACACTGCATATT +
Preference number: 4 (lower is better)
Translates to: CLPYRDQCISCVEILETHQGLRL*NDTLHI
Trigger: AATATGCAGTGTGTCATTTCACAGTCTCAGTCCCTG...GTGTGTCTCTAGTATCTCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp CAAACCTTTCTCTCCACTTCTTTCCCCTTCAGAGATTTTGGTGAAGGCAGGTTTTCCCTGCCTGTACAATaGCTCCAACTTACGAGCTTC +
Preference number: 4 (lower is better)
Translates to: QTFLSTSFPFRDFGEGRFSLPVQ*LQLTSF
Trigger: GAAGCTCGTAAGTTGGAGTCATTGTACAGGCAGGGA...AAACCTGCCTTCACCAAAATCTCTGAAGGGGAAAGAAGTGGAGAGAAAGGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAAGAAACAGAGGCAGATaGTACTGCTCTTGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: CRANMLFALQGPVYQLRGRNRGR*YCSCLF
Trigger: AAAAAGACAAGAGCAGTATCATCTGCCTCTGTTTCT...TCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAACAGCTGTTTGCTTATaGAAAGAGTCAGATGCTACT +
Preference number: 4 (lower is better)
Translates to: CRANMLFALQGPVYQLRGTAVCL*KESDAT
Trigger: AGTAGCATCTGACTCTTTTCATAAGCAAACAGCTGT...TCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGATTGAATTTCCTTGACTaGGCAAATCTTCTGCAGACA +
Preference number: 4 (lower is better)
Translates to: CRANMLFALQGPVYQLRGLNFLD*ANLLQT
Trigger: TGTCTGCAGAAGATTTGCTCAGTCAAGGAAATTCAA...TCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TTTTATTTCTCAAACTGCAGTCCCCGAAGTGAAGCAAACCTTTCTCTCCACTTCGGAGAAAATTTTCCCTaGCCCAGGCATCACGACCAG +
Preference number: 4 (lower is better)
Translates to: FYFSNCSPRSEANLSLHFGENFP*PRHHDQ
Trigger: CTGGTCGTGATGCCTGGGGCAGGGAAAATTTTCTCC...GAAGTGGAGAGAAAGGTTTGCTTCACTTCGGGGACTGCAGTTTGAGAAATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGATTTCCCCCATATATATaGAATAGCACACACCCTTTC +
Preference number: 4 (lower is better)
Translates to: CRANMLFALQGPVYQLRGFPPYI*NSTHPF
Trigger: GAAAGGGTGTGTGCTATTGCATATATATGGGGGAAA...TCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp CGAAGGGCAGGAGCCTCAGCCTACAACTATGTTCCAGCACTTGCCACAGAAAACAAGTACCACACATATTaGACTTTTTGCCGAACGAAA +
Preference number: 4 (lower is better)
Translates to: RRAGASAYNYVPALATENKYHTY*TFCRTK
Trigger: TTTCGTTCGGCAAAAAGTGCAATATGTGTGGTACTT...GTTTTCTGTGGCAAGTGCTGGAACATAGTTGTAGGCTGAGGCTCCTGCCCTTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAGATACTAGAGACACACAAACTCCCCGATGGATaGCTCATTTTCTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: CLPYRDQCISCVEILETHKLPDG*LIFLLL
Trigger: CAAGAGCAAGAAAATGAGCCATCCATCGGGGAGTTT...GTGTGTCTCTAGTATCTCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAGATACTAGAGACACACTTCACTGTGTTAGGATaGTCTCAATCTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: CLPYRDQCISCVEILETHFTVLG*SQSPDL
Trigger: GAGGTCAGGAGATTGAGACCATCCTAACACAGTGAA...GTGTGTCTCTAGTATCTCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CAA 72 bp AAACCTTTCTCTCCACTTCTTTCCCCTTCAGAGATTTaGGTGAAGGCAGGTTTCTCTTACCACCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: KPFSPLLSPSEI*VKAGFSYHPWW
Trigger: CCACCATGGGTGGTAAGAGAAACCTGCCTTCACCAAAATCTCTGAAGGGGAAAGAAGTGGAGAGAAAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGATTACCTGATAAAGTTTaGTTATGTGAGGGTGGTCTA +
Preference number: 4 (lower is better)
Translates to: CRANMLFALQGPVYQLRGLPDKV*LCEGGL
Trigger: TAGACCACCCTCACATAATCAAACTTTATCAGGTAA...TCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp AAGTGCTTGGTAAAACTAATGTACAAATATAAGCTATTGCTCCCTTGTGGGTGGGTCCTGAGTATATTCTaGCACTCGGCAACCCAGGGC +
Preference number: 4 (lower is better)
Translates to: KCLVKLMYKYKLLLPCGWVLSIF*HSATQG
Trigger: GCCCTGGGTTGCCGAGTGTCAGAATATACTCAGGAC...CCACCCACAAGGGAGCAATAGCTTATATTTGTACATTAGTTTTACCAAGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp CAAACCTTTCTCTCCACTTCTTTCCCCTTCAGAGATTTTGGTGAAGGCAGGTTTGCCTTAGTTTCTGGCTaGTCACCTAATCACTCTGGA +
Preference number: 4 (lower is better)
Translates to: QTFLSTSFPFRDFGEGRFALVSG*SPNHSG
Trigger: TCCAGAGTGATTAGGTGATCAGCCAGAAACTAAGGC...AAACCTGCCTTCACCAAAATCTCTGAAGGGGAAAGAAGTGGAGAGAAAGGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp AAAGAATTAAAGCATGATCTGGGGGAAAGGCACCGCACTACCACTTCACATGGGAAAGGTCTCACCACTTaGATTTCCTTGACTGAGCAA +
Preference number: 4 (lower is better)
Translates to: KELKHDLGERHRTTTSHGKGLTT*ISLTEQ
Trigger: TTGCTCAGTCAAGGAAATTCAAGTGGTGAGACCTTT...CCCATGTGAAGTGGTAGTGCGGTGCCTTTCCCCCAGATCATGCTTTAATTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp AGTACCACACATATTGCACTTTTTGCCGAACGAAATTTTTACCTCACGTTCATCTTCTGGAGTCTGTGCTaGAGGTACTGGGTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: STTHIALFAERNFYLTFIFWSLC*RYWVSR
Trigger: CCTGGAGACCCAGTACCTGCAGCACAGACTCCAGAA...GATGAACGTGAGGTAAAAATTTCGTTCGGCAAAAAGTGCAATATGTGTGGTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TTTTATTTCTCAAACTGCAGTCCCCGAAGTGAAGCAAACCTTTCTCTCCACTTCAGAAAGAGTCGCTTCTaGTGGAGCCTATGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: FYFSNCSPRSEANLSLHFRKSRF*WSLCSC
Trigger: GCAGGAACATAGGCTCCAGCAGAAGCGACTCTTTCT...GAAGTGGAGAGAAAGGTTTGCTTCACTTCGGGGACTGCAGTTTGAGAAATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAAAGGAAGATGCTTTGTaGTTAACACATTCATCTGCT +
Preference number: 4 (lower is better)
Translates to: CRANMLFALQGPVYQLRGKEDAL*LTHSSA
Trigger: AGCAGATGAATGTGTTAAGCACAAAGCATCTTCCTT...TCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp AAAGAATTAAAGCATGATCTGGGGGAAAGGCACCGCACTACCACTTCACATGGGATGATCAAAGATCCCTaGCTGTACAATGACTCCAAC +
Preference number: 4 (lower is better)
Translates to: KELKHDLGERHRTTTSHGMIKDP*LYNDSN
Trigger: GTTGGAGTCATTGTACAGGCAGGGATCTTTGATCAT...CCCATGTGAAGTGGTAGTGCGGTGCCTTTCCCCCAGATCATGCTTTAATTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp AAGTGCTTGGTAAAACTAATGTACAAATATAAGCTATTGCTCCCTTGTGGGTGGTGTTCGGTGAATGCATaGTCACTGGGAGCCCCACAG +
Preference number: 4 (lower is better)
Translates to: KCLVKLMYKYKLLLPCGWCSVNA*SLGAPQ
Trigger: CTGTGGGGCTCCCAGTGACCATGCATTCACCGAACA...CCACCCACAAGGGAGCAATAGCTTATATTTGTACATTAGTTTTACCAAGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TTGCACTTTTTGCCGAACGAAATTTTTACCTCACGTTCATCTCACCAAAGTCTCACTGGAGACCTGTTGTaGACCTCTCGTTTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LHFLPNEIFTSRSSHQSLTGDLL*TSRFWE
Trigger: CTCCCAGAAACGAGAGGTCCACAACAGGTCTCCAGT...GAGACTTTGGTGAGATGAACGTGAGGTAAAAATTTCGTTCGGCAAAAAGTGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TTGCACTTTTTGCCGAACGAAATTTTTACCTCACGTTCATCTCACCAAAGTCTCCCTTTGACAGAAGGCTaGGCTTCTGGAGTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: LHFLPNEIFTSRSSHQSLPLTEG*ASGVCA
Trigger: AGCACAGACTCCAGAAGCCCAGCCTTCTGTCAAAGG...GAGACTTTGGTGAGATGAACGTGAGGTAAAAATTTCGTTCGGCAAAAAGTGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp CAAACCTTTCTCTCCACTTCTTTCCCCTTCAGAGATTTTGGTGAAGGCAGGTTTAGGTTGAAACCTGCCTaGAGAAGATGTGGACACAAG +
Preference number: 4 (lower is better)
Translates to: QTFLSTSFPFRDFGEGRFRLKPA*RRCGHK
Trigger: CTTGTGTCCACATCTTCTCCAGGCAGGTTTCAACCT...AAACCTGCCTTCACCAAAATCTCTGAAGGGGAAAGAAGTGGAGAGAAAGGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp AAGTGCTTGGTAAAACTAATGTACAAATATAAGCTATTGCTCCCTTGTGGGTGGAGGAAAGGGCTGTATTaGATCTGCTCGGAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: KCLVKLMYKYKLLLPCGWRKGLY*ICSEEG
Trigger: GCCTTCCTCCGAGCAGATGCAATACAGCCCTTTCCT...CCACCCACAAGGGAGCAATAGCTTATATTTGTACATTAGTTTTACCAAGCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TTTTATTTCTCAAACTGCAGTCCCCGAAGTGAAGCAAACCTTTCTCTCCACTTCAAGAGAGAAGGGGTTTaGTCAGATGGGCATGAACAG +
Preference number: 4 (lower is better)
Translates to: FYFSNCSPRSEANLSLHFKREGV*SDGHEQ
Trigger: CTGTTCATGCCCATCTGAGCAAACCCCTTCTCTCTT...GAAGTGGAGAGAAAGGTTTGCTTCACTTCGGGGACTGCAGTTTGAGAAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TTTTATTTCTCAAACTGCAGTCCCCGAAGTGAAGCAAACCTTTCTCTCCACTTCCAGCAGCCCATTATCTaGACTGGGGAATGTGACATT +
Preference number: 4 (lower is better)
Translates to: FYFSNCSPRSEANLSLHFQQPII*TGECDI
Trigger: AATGTCACATTCCCCAGTGCAGATAATGGGCTGCTG...GAAGTGGAGAGAAAGGTTTGCTTCACTTCGGGGACTGCAGTTTGAGAAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TTTTATTTCTCAAACTGCAGTCCCCGAAGTGAAGCAAACCTTTCTCTCCACTTCCTATGGTTAGCCGTTTaGATGGGTCTAGGACCAACA +
Preference number: 4 (lower is better)
Translates to: FYFSNCSPRSEANLSLHFLWLAV*MGLGPT
Trigger: TGTTGGTCCTAGACCCATCCAAACGGCTAACCATAG...GAAGTGGAGAGAAAGGTTTGCTTCACTTCGGGGACTGCAGTTTGAGAAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp CAAACCTTTCTCTCCACTTCTTTCCCCTTCAGAGATTTTGGTGAAGGCAGGTTTTCACGACCAGTTGATTaGTCACTTCTGACAGAGTGT +
Preference number: 4 (lower is better)
Translates to: QTFLSTSFPFRDFGEGRFSRPVD*SLLTEC
Trigger: ACACTCTGTCAGAAGTGACCAATCAACTGGTCGTGA...AAACCTGCCTTCACCAAAATCTCTGAAGGGGAAAGAAGTGGAGAGAAAGGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp AAGTGCTTGGTAAAACTAATGTACAAATATAAGCTATTGCTCCCTTGTGGGTGGCTCGCATGGCCAGAATaGAACCCCCTAGACTTTCCA +
Preference number: 4 (lower is better)
Translates to: KCLVKLMYKYKLLLPCGWLAWPE*NPLDFP
Trigger: TGGAAAGTCTAGGGGGTTCCATTCTGGCCATGCGAG...CCACCCACAAGGGAGCAATAGCTTATATTTGTACATTAGTTTTACCAAGCACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp CAAACCTTTCTCTCCACTTCTTTCCCCTTCAGAGATTTTGGTGAAGGCAGGTTTCTCTCGATTTCTCTCTaGGTCCTTAACCTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: QTFLSTSFPFRDFGEGRFLSISL*VLNLPV
Trigger: TACTGGAAGGTTAAGGACCCAGAGAGAAATCGAGAG...AAACCTGCCTTCACCAAAATCTCTGAAGGGGAAAGAAGTGGAGAGAAAGGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TTTTATTTCTCAAACTGCAGTCCCCGAAGTGAAGCAAACCTTTCTCTCCACTTCATGAGTCTCTTCTGCTaGAGACTTTGGTCCACGAGA +
Preference number: 4 (lower is better)
Translates to: FYFSNCSPRSEANLSLHFMSLFC*RLWSTR
Trigger: TCTCGTGGACCAAAGTCTCCAGCAGAAGAGACTCAT...GAAGTGGAGAGAAAGGTTTGCTTCACTTCGGGGACTGCAGTTTGAGAAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CAA 72 bp AAGTGCTTGGTAAAACTAATGTACAAATATAAGCTATaGCTCCCTTGTGGGTGGGCGAGCAGAGTATCTGGG +
Preference number: 4 (lower is better)
Translates to: KCLVKLMYKYKL*LPCGWASRVSG
Trigger: CCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATAGCTTATATTTGTACATTAGTTTTACCAAGCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TTTTATTTCTCAAACTGCAGTCCCCGAAGTGAAGCAAACCTTTCTCTCCACTTCTCCATTTATGCTCCTTaGTTTGGGCTATGGTTAGCC +
Preference number: 4 (lower is better)
Translates to: FYFSNCSPRSEANLSLHFSIYAP*FGLWLA
Trigger: GGCTAACCATAGCCCAAATCAAGGAGCATAAATGGA...GAAGTGGAGAGAAAGGTTTGCTTCACTTCGGGGACTGCAGTTTGAGAAATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp TTGCACTTTTTGCCGAACGAAATTTTTACCTCACGTTCATCTCACCAAAGTCTCAAGTTCAGGTCCCTCTaGACAGACCCCATATCATAC +
Preference number: 4 (lower is better)
Translates to: LHFLPNEIFTSRSSHQSLKFRSL*TDPISY
Trigger: GTATGATATGGGGTCTGTTCAGAGGGACCTGAACTT...GAGACTTTGGTGAGATGAACGTGAGGTAAAAATTTCGTTCGGCAAAAAGTGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp CAAACCTTTCTCTCCACTTCTTTCCCCTTCAGAGATTTTGGTGAAGGCAGGTTTCCACTTGAATTTCCTTaGCTGAGCAAATCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: QTFLSTSFPFRDFGEGRFPLEFP*LSKSSA
Trigger: TGCAGAAGATTTGCTCAGTCAAGGAAATTCAAGTGG...AAACCTGCCTTCACCAAAATCTCTGAAGGGGAAAGAAGTGGAGAGAAAGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAGATACTAGAGACACACATCGATTATTTTTATTaGCACCTCCGTCTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: CLPYRDQCISCVEILETHIDYFY*HLRLGD
Trigger: ATCACCAAGACGGAGGTGGCAATAAAAATAATCGAT...GTGTGTCTCTAGTATCTCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TTGCACTTTTTGCCGAACGAAATTTTTACCTCACGTTCATCTCACCAAAGTCTCTCCGCGGTGGTTCTTTaGAATAAAGCTGACAGGTGT +
Preference number: 4 (lower is better)
Translates to: LHFLPNEIFTSRSSHQSLSAVVL*NKADRC
Trigger: ACACCTGTCAGCTTTATTGCAAAGAACCACCGCGGA...GAGACTTTGGTGAGATGAACGTGAGGTAAAAATTTCGTTCGGCAAAAAGTGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp AAAGAATTAAAGCATGATCTGGGGGAAAGGCACCGCACTACCACTTCACATGGGGATGTCTTCTTGATTTaGCTTGTAGCAATATGTGGT +
Preference number: 4 (lower is better)
Translates to: KELKHDLGERHRTTTSHGDVFLI*LVAICG
Trigger: ACCACATATTGCTACAAGGCAAATCAAGAAGACATC...CCCATGTGAAGTGGTAGTGCGGTGCCTTTCCCCCAGATCATGCTTTAATTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TTTTATTTCTCAAACTGCAGTCCCCGAAGTGAAGCAAACCTTTCTCTCCACTTCCCTCTGCCTCAAAATTaGAAGAGTCGGTCCATCAAA +
Preference number: 4 (lower is better)
Translates to: FYFSNCSPRSEANLSLHFPLPQN*KSRSIK
Trigger: TTTGATGGACCGACTCTTCCAATTTTGAGGCAGAGG...GAAGTGGAGAGAAAGGTTTGCTTCACTTCGGGGACTGCAGTTTGAGAAATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp GAATCAGACTGGAAAGCAAGTCAGTACTTCAGAGTAGCCCCGCAGAAAAAGAGCTCTGCAAAGACTCAATaGTTTTCTGCTGATCTATTC +
Preference number: 4 (lower is better)
Translates to: ESDWKASQYFRVAPQKKSSAKTQ*FSADLF
Trigger: GAATAGATCAGCAGAAAACCATTGAGTCTTTGCAGA...GCTCTTTTTCTGCGGGGCTACTCTGAAGTACTGACTTGCTTTCCAGTCTGATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TTGCACTTTTTGCCGAACGAAATTTTTACCTCACGTTCATCTCACCAAAGTCTCTGCATCTCTTGGTACTaGCTGAGGAAAGGGCTGTAT +
Preference number: 4 (lower is better)
Translates to: LHFLPNEIFTSRSSHQSLCISWY*LRKGLY
Trigger: ATACAGCCCTTTCCTCAGCCAGTACCAAGAGATGCA...GAGACTTTGGTGAGATGAACGTGAGGTAAAAATTTCGTTCGGCAAAAAGTGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp AAAGAATTAAAGCATGATCTGGGGGAAAGGCACCGCACTACCACTTCACATGGGGATGATCTGCTTAAATaGTTAACACATCTGTGGTTC +
Preference number: 4 (lower is better)
Translates to: KELKHDLGERHRTTTSHGDDLLK*LTHLWF
Trigger: GAACCACAGATGTGTTAACCATTTAAGCAGATCATC...CCCATGTGAAGTGGTAGTGCGGTGCCTTTCCCCCAGATCATGCTTTAATTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp AGTACCACACATATTGCACTTTTTGCCGAACGAAATTTTTACCTCACGTTCATCGTGCTCGCAATCTTCTaGCATGAAATACGGAATCCG +
Preference number: 4 (lower is better)
Translates to: STTHIALFAERNFYLTFIVLAIF*HEIRNP
Trigger: CGGATTCCGTATTTCATGTCAGAAGATTGCGAGCAC...GATGAACGTGAGGTAAAAATTTCGTTCGGCAAAAAGTGCAATATGTGTGGTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp TTGCACTTTTTGCCGAACGAAATTTTTACCTCACGTTCATCTCACCAAAGTCTCATCCTTCGGATAAGGTaGTCGCAATCTTCTGACATG +
Preference number: 4 (lower is better)
Translates to: LHFLPNEIFTSRSSHQSLILRIR*SQSSDM
Trigger: CATGTCAGAAGATTGCGAGCACCTTATCCGAAGGAT...GAGACTTTGGTGAGATGAACGTGAGGTAAAAATTTCGTTCGGCAAAAAGTGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp AGTACCACACATATTGCACTTTTTGCCGAACGAAATTTTTACCTCACGTTCATCATCAGTCGCAGAACCTaGTCATTAAACTCCCCGATG +
Preference number: 4 (lower is better)
Translates to: STTHIALFAERNFYLTFIISRRT*SLNSPM
Trigger: CATCGGGGAGTTTAATGAGCAGGTTCTGCGACTGAT...GATGAACGTGAGGTAAAAATTTCGTTCGGCAAAAAGTGCAATATGTGTGGTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CAA 72 bp ACTGACCAACAGAACCAGTCTCCTCAGCAGCTTACATaGCAGTCAATACAGAGGGTTATGGAATTTATTGAT +
Preference number: 4 (lower is better)
Translates to: TDQQNQSPQQLT*QSIQRVMEFID
Trigger: ATCAATAAATTCCATAACCCTCTGTATTGACTGCAATGTAAGCTGCTGAGGAGACTGGTTCTGTTGGTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CAA 72 bp AACCACCCACCTCCCTTCAGATATAAGCAAATAATCTaGCCCTTTCTACAAAGTGCAGATATCTCTGTATCC +
Preference number: 4 (lower is better)
Translates to: NHPPPFRYKQII*PFLQSADISVS
Trigger: GGATACAGAGATATCTGCACTTTGTAGAAAGGGCAAGATTATTTGCTTATATCTGAAGGGAGGTGGGTGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR TCA 90 bp AAGTGCTTGGTAAAACTAATGTACAAATATAAGCTATTGCTCCCTTGTGGGTGGGTGCATCTGATTTCCTaGTGTCTTCTTGATTTGCCT +
Preference number: 4 (lower is better)
Translates to: KCLVKLMYKYKLLLPCGWVHLIS*CLLDLP
Trigger: AGGCAAATCAAGAAGACATCAGGAAATCAGATGCAC...CCACCCACAAGGGAGCAATAGCTTATATTTGTACATTAGTTTTACCAAGCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp AAGTGCTTGGTAAAACTAATGTACAAATATAAGCTATTGCTCCCTTGTGGGTGGTTATGCTCCTTGATTTaGGCTATGGTTAGCCGTTTG +
Preference number: 4 (lower is better)
Translates to: KCLVKLMYKYKLLLPCGWLCSLI*AMVSRL
Trigger: CAAACGGCTAACCATAGCCCAAATCAAGGAGCATAA...CCACCCACAAGGGAGCAATAGCTTATATTTGTACATTAGTTTTACCAAGCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CCA 90 bp TTGCACTTTTTGCCGAACGAAATTTTTACCTCACGTTCATCTCACCAAAGTCTCATTTTCTTGCTCTTGTaGATAGAGAACAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LHFLPNEIFTSRSSHQSLIFLLL*IENRSL
Trigger: CAGAGACCTGTTCTCTATCCACAAGAGCAAGAAAAT...GAGACTTTGGTGAGATGAACGTGAGGTAAAAATTTCGTTCGGCAAAAAGTGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp AAGTGCTTGGTAAAACTAATGTACAAATATAAGCTATTGCTCCCTTGTGGGTGGTTTTATTTCTCAAACTaGAGTCCCCGAAGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: KCLVKLMYKYKLLLPCGWFYFSN*SPRSEA
Trigger: TGCTTCACTTCGGGGACTGCAGTTTGAGAAATAAAA...CCACCCACAAGGGAGCAATAGCTTATATTTGTACATTAGTTTTACCAAGCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304987.4
3UTR CAA 72 bp CGCAGAAAAAGAGCGATACTAAGCCTTCTTAGTGTTTaGTTTGTTAGTAGTGATGAAGAGAAAACTGCTTGG +
Preference number: 4 (lower is better)
Translates to: RRKRAILSLLSV*FVSSDEEKTAW
Trigger: CCAAGCAGTTTTCTCTTCATCACTACTAACAAACAAAACACTAAGAAGGCTTAGTATCGCTCTTTTTCTGCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR GCA 90 bp AGTACCACACATATTGCACTTTTTGCCGAACGAAATTTTTACCTCACGTTCATCGGAGCTATTATGATTTaGACTCATAATACCAAAGCT +
Preference number: 4 (lower is better)
Translates to: STTHIALFAERNFYLTFIGAIMI*THNTKA
Trigger: AGCTTTGGTATTATGAGTGCAAATCATAATAGCTCC...GATGAACGTGAGGTAAAAATTTCGTTCGGCAAAAAGTGCAATATGTGTGGTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS TCA 90 bp CCACCCGGACCGGCCCGCGCTGCAAGTGCCTCGGGCCATCCGCCATaGCCATGCTGGGCCCCGCTGCTAGACACGGCGGACAGGAGCGCG +
Preference number: 5 (lower is better)
Translates to: PPGPARAASASGHPP*PCWAPLLDTADRSA
Trigger: CGCGCTCCTGTCCGCCGTGTCTAGCAGCGGGGCCCAGCATGGTCATGGCGGATGGCCCGAGGCACTTGCAGCGCGGGCCGGTCCGGGTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS GCA 90 bp CTGGGCTTCTGGAGTCTGTGCTGCAGGTACTGGGTCTCCAGGCTCTaGCGTGGGGACAGCTGGGGATGCACGCTGGCAGGGAGAGTGGAG +
Preference number: 5 (lower is better)
Translates to: LGFWSLCCRYWVSRL*RGDSWGCTLAGRVE
Trigger: CTCCACTCTCCCTGCCAGCGTGCATCCCCAGCTGTCCCCACGGCAGAGCCTGGAGACCCAGTACCTGCAGCACAGACTCCAGAAGCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp TGGGCCCCCTCTTCCTGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGGTGCGATGCGGCCCCTaGGCAATTGAGGAAGGGGGT +
Preference number: 5 (lower is better)
Translates to: WAPSSCRANMLFALQGPVVRCGP*AIEEGG
Trigger: ACCCCCTTCCTCAATTGCCAAGGGGCCGCATCGCAC...CACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACAGGAAGAGGGGGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS TCA 90 bp CTCCAGCCCTTCGTCAATGGAGGTCTCCATCATGTTGCTGGGCAGTaGCTGGCATCCCTTCCGCACCAGGACAGGAGGCACAGGGTCAAG +
Preference number: 5 (lower is better)
Translates to: LQPFVNGGLHHVAGQ*LASLPHQDRRHRVK
Trigger: CTTGACCCTGTGCCTCCTGTCCTGGTGCGGAAGGGATGCCAGTCACTGCCCAGCAACATGATGGAGACCTCCATTGACGAAGGGCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304987.4
ENST00000533868.1
CDS GCA 90 bp TGCTCAGCAATGGTGCTAGGCCGACGCTGGCGGCCATCAAGTCTCTaGTCCACTGGGAAACTGCTCCGATGTGATTTCAGGCGCTCCACC +
Preference number: 5 (lower is better)
Translates to: CSAMVLGRRWRPSSL*STGKLLRCDFRRST
Trigger: GGTGGAGCGCCTGAAATCACATCGGAGCAGTTTCCCAGTGGAGCAGAGACTTGATGGCCGCCAGCGTCGGCCTAGCACCATTGCTGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp GCTGAAAGGCAGGCGGGTCTGCGGGGTTTTTGTCTCCCTCAGCCTGGTTCAGTGCAGGGGAAGCAGCGCTaGGCAGCTCACAAGTCTGAT +
Preference number: 5 (lower is better)
Translates to: AERQAGLRGFCLPQPGSVQGKQR*AAHKSD
Trigger: ATCAGACTTGTGAGCTGCCAAGCGCTGCTTCCCCTG...CACTGAACCAGGCTGAGGGAGACAAAAACCCCGCAGACCCGCCTGCCTTTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS GCA 90 bp CTCCTTCTGTCTCCAGCCCTTCGTCAATGGAGGTCTCCATCATGTTaGTGGGCAGTGACTGGCATCCCTTCCGCACCAGGACAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: LLLSPALRQWRSPSC*WAVTGIPSAPGQEA
Trigger: TGCCTCCTGTCCTGGTGCGGAAGGGATGCCAGTCACTGCCCAGCAACATGATGGAGACCTCCATTGACGAAGGGCTGGAGACAGAAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304987.4
ENST00000533868.1
CDS-3UTR CAA 90 bp TGTGTGGGTGGAGGTGGGGGAGTCGTCAGTCTTATGATGAGTCTCTTCTGCTGGTTCACCACAGCGAAGTaGCCCTTGCCCAGCGTGCCC +
Preference number: 5 (lower is better)
Translates to: CVGGGGGVVSLMMSLFCWFTTAK*PLPSVP
Trigger: GGGCACGCTGGGCAAGGGCAACTTCGCTGTGGTGAA...CCAGCAGAAGAGACTCATCATAAGACTGACGACTCCCCCACCTCCACCCACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp CGAAGGGCAGGAGCCTCAGCCTACAACTATGTTCCAGCACTTGCCACAGAAAACGCTGCCCTCGAGAGCTaGCTCCACTCGACCGAAGGG +
Preference number: 5 (lower is better)
Translates to: RRAGASAYNYVPALATENAALES*LHSTEG
Trigger: CCCTTCGGTCGAGTGGAGCAAGCTCTCGAGGGCAGC...GTTTTCTGTGGCAAGTGCTGGAACATAGTTGTAGGCTGAGGCTCCTGCCCTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp GGGCTCGCATGGCCAGAATGGAACCCCCTAGACTTTCCACACGTCACCTGCCTGGCTATGGTTAGCCGTTaGGATGGGTCTAGGACCAAC +
Preference number: 5 (lower is better)
Translates to: GLAWPEWNPLDFPHVTCLAMVSR*DGSRTN
Trigger: GTTGGTCCTAGACCCATCCAAACGGCTAACCATAGC...CAGGCAGGTGACGTGTGGAAAGTCTAGGGGGTTCCATTCTGGCCATGCGAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp TGGGCCCCCTCTTCCTGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGGCTCTTGATGCGTTCTaGAGTTTCTTGCCCCCTGCC +
Preference number: 5 (lower is better)
Translates to: WAPSSCRANMLFALQGPVALDAF*SFLPPA
Trigger: GGCAGGGGGCAAGAAACTCAAGAACGCATCAAGAGC...CACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACAGGAAGAGGGGGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS TCA 90 bp TTCTTCCATGAATGCAGCTTCCGCCTGACAGCCAGATGCTGGAAATaGAAAGGCCTCCACGTTGGATGCCTGGGGGAGGAGGGCAGATCG +
Preference number: 5 (lower is better)
Translates to: FFHECSFRLTARCWK*KGLHVGCLGEEGRS
Trigger: CGATCTGCCCTCCTCCCCCAGGCATCCAACGTGGAGGCCTTTTCATTTCCAGCATCTGGCTGTCAGGCGGAAGCTGCATTCATGGAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS GCA 90 bp CCAGTTGATTGGTCACTTCTGACAGAGTGTGCCGTCTCTGCCCGCTaGGTGTGGACTGAAATGCCTCAAAGGCATGAGCGGGGTCTTCCT +
Preference number: 5 (lower is better)
Translates to: PVDWSLLTECAVSAR*VWTEMPQRHERGLP
Trigger: AGGAAGACCCCGCTCATGCCTTTGAGGCATTTCAGTCCACACGCAGCGGGCAGAGACGGCACACTCTGTCAGAAGTGACCAATCAACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304987.4
ENST00000533868.1
CDS-3UTR CAA 90 bp TGGGCCCCCTCTTCCTGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGCTGAAGCTGCATCTCTaGGTACTGGCTGAGGAAAGG +
Preference number: 5 (lower is better)
Translates to: WAPSSCRANMLFALQGPVLKLHL*VLAEER
Trigger: CCTTTCCTCAGCCAGTACCAAGAGATGCAGCTTCAG...CACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACAGGAAGAGGGGGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp TATTGCTCCCTTGTGGGTGGGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCACCAGGACATACCCGTaGTGTTGTGGATCCACAGCG +
Preference number: 5 (lower is better)
Translates to: YCSLVGGRAEYLGRTHHSTRTYP*CCGSTA
Trigger: CGCTGTGGATCCACAACACAACGGGTATGTCCTGGT...GCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp TGGGCCCCCTCTTCCTGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGTGCTTTGTGATGGCCTaGGGGGACAACTTGCATCAG +
Preference number: 5 (lower is better)
Translates to: WAPSSCRANMLFALQGPVCFVMA*GDNLHQ
Trigger: CTGATGCAAGTTGTCCCCCAAGGCCATCACAAAGCA...CACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACAGGAAGAGGGGGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp GGGCTCGCATGGCCAGAATGGAACCCCCTAGACTTTCCACACGTCACCTGCCTGATACTAGAGACACACTaGCCCAGCTGGGAATTGCAG +
Preference number: 5 (lower is better)
Translates to: GLAWPEWNPLDFPHVTCLILETH*PSWELQ
Trigger: CTGCAATTCCCAGCTGGGCAAGTGTGTCTCTAGTAT...CAGGCAGGTGACGTGTGGAAAGTCTAGGGGGTTCCATTCTGGCCATGCGAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp TGGACAGCTGCACTGTCACCTGAAGGCGGCCTCTTCCCCAAAGCCAGGCGGCTGCGGCTGATACTGCTCTaGTCTTTCATACATTGCTCT +
Preference number: 5 (lower is better)
Translates to: WTAALSPEGGLFPKARRLRLILL*SFIHCS
Trigger: AGAGCAATGTATGAAAGACAAGAGCAGTATCAGCCG...CAGCCGCCTGGCTTTGGGGAAGAGGCCGCCTTCAGGTGACAGTGCAGCTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS TCA 90 bp AATTTTCCCTGCCCCAGGCATCACGACCAGTTGATTGGTCACTTCTaGCAGAGTGTGCCGTCTCTGCCCGCTGCGTGTGGACTGAAATGC +
Preference number: 5 (lower is better)
Translates to: NFPCPRHHDQLIGHF*QSVPSLPAACGLKC
Trigger: GCATTTCAGTCCACACGCAGCGGGCAGAGACGGCACACTCTGTCAGAAGTGACCAATCAACTGGTCGTGATGCCTGGGGCAGGGAAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304987.4
ENST00000533868.1
CDS GCA 90 bp ACTGGAGACCTGTTGTGGACCTCTCGTTTCTGGGAGCTCAGAGCCTaGATGGCTGGGTTGGTAGGTCTCAGGCTTATGAAGGGAGATGTC +
Preference number: 5 (lower is better)
Translates to: TGDLLWTSRFWELRA*MAGLVGLRLMKGDV
Trigger: GACATCTCCCTTCATAAGCCTGAGACCTACCAACCCAGCCATGCAGGCTCTGAGCTCCCAGAAACGAGAGGTCCACAACAGGTCTCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS GCA 90 bp AGCAAGGTCCTGGAGCTGAGGAGCCGCCGGCGCCAGGTTAGGGTCTaGCTCCGGTCCTATTTGTTCATACAACAACTGCACTTTGTTCAA +
Preference number: 5 (lower is better)
Translates to: SKVLELRSRRRQVRV*LRSYLFIQQLHFVQ
Trigger: TTGAACAAAGTGCAGTTGTTGTATGAACAAATAGGACCGGAGGCAGACCCTAACCTGGCGCCGGCGGCTCCTCAGCTCCAGGACCTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp AAAGAATTAAAGCATGATCTGGGGGAAAGGCACCGCACTACCACTTCACATGGGATTGCCACCTCCGTCTaGGTGATCCGGTGCCGCCCC +
Preference number: 5 (lower is better)
Translates to: KELKHDLGERHRTTTSHGIATSV*VIRCRP
Trigger: GGGGCGGCACCGGATCACCAAGACGGAGGTGGCAAT...CCCATGTGAAGTGGTAGTGCGGTGCCTTTCCCCCAGATCATGCTTTAATTCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp GGGCTCGCATGGCCAGAATGGAACCCCCTAGACTTTCCACACGTCACCTGCCTGTGCCTCCGGTCCTATTaGTTCATACAACAACTGCAC +
Preference number: 5 (lower is better)
Translates to: GLAWPEWNPLDFPHVTCLCLRSY*FIQQLH
Trigger: GTGCAGTTGTTGTATGAACAAATAGGACCGGAGGCA...CAGGCAGGTGACGTGTGGAAAGTCTAGGGGGTTCCATTCTGGCCATGCGAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp TATTGCTCCCTTGTGGGTGGGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCGGGCTAACATGCTGTTaGCCTTACAGGGACCAGTGT +
Preference number: 5 (lower is better)
Translates to: YCSLVGGRAEYLGRTHHSGLTCC*PYRDQC
Trigger: ACACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCC...GCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp TGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAGGGCTGGCTTCAGTCTaGGGCTCCTGTCTGTCCCAA +
Preference number: 5 (lower is better)
Translates to: CRANMLFALQGPVYQLRGGLASV*GSCLSQ
Trigger: TTGGGACAGACAGGAGCCCAAGACTGAAGCCAGCCC...TCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp TGTGTGGGTGGAGGTGGGGGAGTCGTCAGTCTTATGATGAGTCTCTTCTGCTGGGCCCAGTTTAGGAGTTaGAGTGTAGCAGGTCAGCCC +
Preference number: 5 (lower is better)
Translates to: CVGGGGGVVSLMMSLFCWAQFRS*SVAGQP
Trigger: GGGCTGACCTGCTACACTCAAACTCCTAAACTGGGC...CCAGCAGAAGAGACTCATCATAAGACTGACGACTCCCCCACCTCCACCCACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp CGAAGGGCAGGAGCCTCAGCCTACAACTATGTTCCAGCACTTGCCACAGAAAACTCACTCACTGTGTCCTaGCATCCTCAACTGCCCGCA +
Preference number: 5 (lower is better)
Translates to: RRAGASAYNYVPALATENSLTVS*HPQLPA
Trigger: TGCGGGCAGTTGAGGATGCAAGGACACAGTGAGTGA...GTTTTCTGTGGCAAGTGCTGGAACATAGTTGTAGGCTGAGGCTCCTGCCCTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp TGGGCCCCCTCTTCCTGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGTACAAATATAAGCTATaGCTCCCTTGTGGGTGGGCG +
Preference number: 5 (lower is better)
Translates to: WAPSSCRANMLFALQGPVYKYKL*LPCGWA
Trigger: CGCCCACCCACAAGGGAGCAATAGCTTATATTTGTA...CACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACAGGAAGAGGGGGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp TATTGCTCCCTTGTGGGTGGGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCAGGAGATTTTCAGCTTaGAGGTCACGGTGCACAATC +
Preference number: 5 (lower is better)
Translates to: YCSLVGGRAEYLGRTHHSRRFSA*RSRCTI
Trigger: GATTGTGCACCGTGACCTCAAAGCTGAAAATCTCCT...GCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp TGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAGATACTAGAGACACACGCGTTCTTGAGTTTCTaGCCCCCTGCCTCCACGGTG +
Preference number: 5 (lower is better)
Translates to: CLPYRDQCISCVEILETHAFLSF*PPASTV
Trigger: CACCGTGGAGGCAGGGGGCAAGAAACTCAAGAACGC...GTGTGTCTCTAGTATCTCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp TATTGCTCCCTTGTGGGTGGGCGAGCAGAGTATCTGGGCAGAACCCATCACAGCCCTCAGCAGCTTACATaGCAGTCAATACAGAGGGTT +
Preference number: 5 (lower is better)
Translates to: YCSLVGGRAEYLGRTHHSPQQLT*QSIQRV
Trigger: AACCCTCTGTATTGACTGCAATGTAAGCTGCTGAGG...GCTGTGATGGGTTCTGCCCAGATACTCTGCTCGCCCACCCACAAGGGAGCAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS TCA 90 bp CTGGCGGCCATCAAGTCTCTGCTCCACTGGGAAACTGCTCCGATGTaGTTTCAGGCGCTCCACCAACAAGAAATAAATGGCAGCAAAGTG +
Preference number: 5 (lower is better)
Translates to: LAAIKSLLHWETAPM*FQALHQQEINGSKV
Trigger: CACTTTGCTGCCATTTATTTCTTGTTGGTGGAGCGCCTGAAATCACATCGGAGCAGTTTCCCAGTGGAGCAGAGACTTGATGGCCGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS TCA 90 bp TTTGGAGTGTCCACACACTCTTCTTCCATGAATGCAGCTTCCGCCTaGCAGCCAGATGCTGGAAATGAAAAGGCCTCCACGTTGGATGCC +
Preference number: 5 (lower is better)
Translates to: FGVSTHSSSMNAASA*QPDAGNEKASTLDA
Trigger: GGCATCCAACGTGGAGGCCTTTTCATTTCCAGCATCTGGCTGTCAGGCGGAAGCTGCATTCATGGAAGAAGAGTGTGTGGACACTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp CGAAGGGCAGGAGCCTCAGCCTACAACTATGTTCCAGCACTTGCCACAGAAAACCCCTCTGCCTCAAAATaGGAAGAGTCGGTCCATCAA +
Preference number: 5 (lower is better)
Translates to: RRAGASAYNYVPALATENPSASK*EESVHQ
Trigger: TTGATGGACCGACTCTTCCAATTTTGAGGCAGAGGG...GTTTTCTGTGGCAAGTGCTGGAACATAGTTGTAGGCTGAGGCTCCTGCCCTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp TGGGCCCCCTCTTCCTGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGAAAATAGGCCTGCAGTaGAGACTGCTTCTGAAGAAA +
Preference number: 5 (lower is better)
Translates to: WAPSSCRANMLFALQGPVKIGLQ*RLLLKK
Trigger: TTTCTTCAGAAGCAGTCTCAACTGCAGGCCTATTTT...CACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACAGGAAGAGGGGGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp AAAGAATTAAAGCATGATCTGGGGGAAAGGCACCGCACTACCACTTCACATGGGCTCAAGTTACCGACGTaGGTAGGAGCTGGGCTCGCA +
Preference number: 5 (lower is better)
Translates to: KELKHDLGERHRTTTSHGLKLPT*VGAGLA
Trigger: TGCGAGCCCAGCTCCTACCAACGTCGGTAACTTGAG...CCCATGTGAAGTGGTAGTGCGGTGCCTTTCCCCCAGATCATGCTTTAATTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp GGGCTCGCATGGCCAGAATGGAACCCCCTAGACTTTCCACACGTCACCTGCCTGAAAGTACCACACATATaGCACTTTTTGCCGAACGAA +
Preference number: 5 (lower is better)
Translates to: GLAWPEWNPLDFPHVTCLKVPHI*HFLPNE
Trigger: TTCGTTCGGCAAAAAGTGCAATATGTGTGGTACTTT...CAGGCAGGTGACGTGTGGAAAGTCTAGGGGGTTCCATTCTGGCCATGCGAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp TGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAGATACTAGAGACACACGGCTGCCACACCATGTaGCCAGCAGTTCACCACTTT +
Preference number: 5 (lower is better)
Translates to: CLPYRDQCISCVEILETHGCHTM*PAVHHF
Trigger: AAAGTGGTGAACTGCTGGCAACATGGTGTGGCAGCC...GTGTGTCTCTAGTATCTCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp TGTGTGGGTGGAGGTGGGGGAGTCGTCAGTCTTATGATGAGTCTCTTCTGCTGGGGATGGCTCATTTTCTaGCTCTTGTGGATAGAGAAC +
Preference number: 5 (lower is better)
Translates to: CVGGGGGVVSLMMSLFCWGWLIF*LLWIEN
Trigger: GTTCTCTATCCACAAGAGCAAGAAAATGAGCCATCC...CCAGCAGAAGAGACTCATCATAAGACTGACGACTCCCCCACCTCCACCCACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp AAAGAATTAAAGCATGATCTGGGGGAAAGGCACCGCACTACCACTTCACATGGGCCCACAGTCTGTGCCTaGGCAACTGTTTGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: KELKHDLGERHRTTTSHGPTVCA*ATVCSA
Trigger: TGCTGAGCAAACAGTTGCCAAGGCACAGACTGTGGG...CCCATGTGAAGTGGTAGTGCGGTGCCTTTCCCCCAGATCATGCTTTAATTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp TGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGATCAAGCAGACAGCCATaGACCTTTGGAGTGTCCACA +
Preference number: 5 (lower is better)
Translates to: CRANMLFALQGPVYQLRGSSRQP*TFGVST
Trigger: TGTGGACACTCCAAAGGTCAATGGCTGTCTGCTTGA...TCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp AAGTGCTTGGTAAAACTAATGTACAAATATAAGCTATTGCTCCCTTGTGGGTGGGCTGGAGGGGGCCTCTaGCAGTCCTGGGCTTCTGGG +
Preference number: 5 (lower is better)
Translates to: KCLVKLMYKYKLLLPCGWAGGGL*QSWASG
Trigger: CCCAGAAGCCCAGGACTGCAAGAGGCCCCCTCCAGC...CCACCCACAAGGGAGCAATAGCTTATATTTGTACATTAGTTTTACCAAGCACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp CAAACCTTTCTCTCCACTTCTTTCCCCTTCAGAGATTTTGGTGAAGGCAGGTTTGCGGCCCCTTGGCAATaGAGGAAGGGGGTGTTCTGT +
Preference number: 5 (lower is better)
Translates to: QTFLSTSFPFRDFGEGRFAAPWQ*RKGVFC
Trigger: ACAGAACACCCCCTTCCTCAATTGCCAAGGGGCCGC...AAACCTGCCTTCACCAAAATCTCTGAAGGGGAAAGAAGTGGAGAGAAAGGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp CGAAGGGCAGGAGCCTCAGCCTACAACTATGTTCCAGCACTTGCCACAGAAAACTCCCCTTCAGAGATTTaGGTGAAGGCAGGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: RRAGASAYNYVPALATENSPSEI*VKAGFS
Trigger: AGAGAAACCTGCCTTCACCAAAATCTCTGAAGGGGA...GTTTTCTGTGGCAAGTGCTGGAACATAGTTGTAGGCTGAGGCTCCTGCCCTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS TCA 90 bp GTAGGTCTCAGGCTTATGAAGGGAGATGTCATGCGGGGTGAAGGCTaGTTGGCTAACATGATGTCCTTAAGGGAAGGGTTGTCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: VGLRLMKGDVMRGEG*LANMMSLREGLSSR
Trigger: TCTGGAAGACAACCCTTCCCTTAAGGACATCATGTTAGCCAATCAGCCTTCACCCCGCATGACATCTCCCTTCATAAGCCTGAGACCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304987.4
ENST00000533868.1
CDS-3UTR CAA 90 bp TGGGCCCCCTCTTCCTGTCGGGCTAACATGCTGTTTGCCTTACAGGGACCAGTGCACATATTGCACTTTTaGCCGAACGAAATTTTTACC +
Preference number: 5 (lower is better)
Translates to: WAPSSCRANMLFALQGPVHILHF*PNEIFT
Trigger: GGTAAAAATTTCGTTCGGCAAAAAGTGCAATATGTG...CACTGGTCCCTGTAAGGCAAACAGCATGTTAGCCCGACAGGAAGAGGGGGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp AGTACCACACATATTGCACTTTTTGCCGAACGAAATTTTTACCTCACGTTCATCGAAAAGGCCTCCACGTaGGATGCCTGGGGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: STTHIALFAERNFYLTFIEKAST*DAWGRR
Trigger: CCTCCTCCCCCAGGCATCCAACGTGGAGGCCTTTTC...GATGAACGTGAGGTAAAAATTTCGTTCGGCAAAAAGTGCAATATGTGTGGTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp ATCACTCTGGAGCTGAGAATATCCTTCTCCCCACATCTAACCCGTGGGCAGAATTTCTTAGGAACACATTaGTCAGTGCTGCCCTCGAGA +
Preference number: 5 (lower is better)
Translates to: ITLELRISFSPHLTRGQNFLGTH*SVLPSR
Trigger: TCTCGAGGGCAGCACTGACAAATGTGTTCCTAAGAA...ATTCTGCCCACGGGTTAGATGTGGGGAGAAGGATATTCTCAGCTCCAGAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp AAAGAATTAAAGCATGATCTGGGGGAAAGGCACCGCACTACCACTTCACATGGGACATTCACCCTGTGCTaGACCAAAATGGGGGCTTTG +
Preference number: 5 (lower is better)
Translates to: KELKHDLGERHRTTTSHGTFTLC*TKMGAL
Trigger: CAAAGCCCCCATTTTGGTCAAGCACAGGGTGAATGT...CCCATGTGAAGTGGTAGTGCGGTGCCTTTCCCCCAGATCATGCTTTAATTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp GAATCAGACTGGAAAGCAAGTCAGTACTTCAGAGTAGCCCCGCAGAAAAAGAGCATGTTACGCCCCTCGTaGAGACAAAGGCTGAGTTCA +
Preference number: 5 (lower is better)
Translates to: ESDWKASQYFRVAPQKKSMLRPS*RQRLSS
Trigger: TGAACTCAGCCTTTGTCTCAACGAGGGGCGTAACAT...GCTCTTTTTCTGCGGGGCTACTCTGAAGTACTGACTTGCTTTCCAGTCTGATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp TTTTATTTCTCAAACTGCAGTCCCCGAAGTGAAGCAAACCTTTCTCTCCACTTCGAGGTCTCCATCATGTaGCTGGGCAGTGACTGGCAT +
Preference number: 5 (lower is better)
Translates to: FYFSNCSPRSEANLSLHFEVSIM*LGSDWH
Trigger: ATGCCAGTCACTGCCCAGCAACATGATGGAGACCTC...GAAGTGGAGAGAAAGGTTTGCTTCACTTCGGGGACTGCAGTTTGAGAAATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp CGAAGGGCAGGAGCCTCAGCCTACAACTATGTTCCAGCACTTGCCACAGAAAACTGTAGCAATATGTGGTaGCTCAGCTTCAGTGAAAAA +
Preference number: 5 (lower is better)
Translates to: RRAGASAYNYVPALATENCSNMW*LSFSEK
Trigger: TTTTTCACTGAAGCTGAGCAACCACATATTGCTACA...GTTTTCTGTGGCAAGTGCTGGAACATAGTTGTAGGCTGAGGCTCCTGCCCTTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp CGAAGGGCAGGAGCCTCAGCCTACAACTATGTTCCAGCACTTGCCACAGAAAACAAACTTCCCAAAGCTTaGGTTTCTTCAGCTGTGAAA +
Preference number: 5 (lower is better)
Translates to: RRAGASAYNYVPALATENKLPKA*VSSAVK
Trigger: TTTCACAGCTGAAGAAACCAAAGCTTTGGGAAGTTT...GTTTTCTGTGGCAAGTGCTGGAACATAGTTGTAGGCTGAGGCTCCTGCCCTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp AGTACCACACATATTGCACTTTTTGCCGAACGAAATTTTTACCTCACGTTCATCGGGTCTGCGGGGTTTTaGTCTCCCTCAGCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: STTHIALFAERNFYLTFIGSAGF*SPSAWF
Trigger: GAACCAGGCTGAGGGAGACAAAAACCCCGCAGACCC...GATGAACGTGAGGTAAAAATTTCGTTCGGCAAAAAGTGCAATATGTGTGGTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp AGTACCACACATATTGCACTTTTTGCCGAACGAAATTTTTACCTCACGTTCATCGCCTGCATGGCTGGGTaGGTAGGTCTCAGGCTTATG +
Preference number: 5 (lower is better)
Translates to: STTHIALFAERNFYLTFIACMAG*VGLRLM
Trigger: CATAAGCCTGAGACCTACCAACCCAGCCATGCAGGC...GATGAACGTGAGGTAAAAATTTCGTTCGGCAAAAAGTGCAATATGTGTGGTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp TGTTTGCCTTACAGGGACCAGTGTATCAGTTGCGTGGAGATACTAGAGACACACACTATGTTCCAGCACTaGCCACAGAAAACTTTGTGG +
Preference number: 5 (lower is better)
Translates to: CLPYRDQCISCVEILETHTMFQH*PQKTLW
Trigger: CCACAAAGTTTTCTGTGGCAAGTGCTGGAACATAGT...GTGTGTCTCTAGTATCTCCACGCAACTGATACACTGGTCCCTGTAAGGCAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS GCA 90 bp GCCAGGTTAGGGTCTGCCTCCGGTCCTATTTGTTCATACAACAACTaGACTTTGTTCAACTCTAGAATTCCTTTGGTTCTAGCCAGATTC +
Preference number: 5 (lower is better)
Translates to: ARLGSASGPICSYNN*TLFNSRIPLVLARF
Trigger: GAATCTGGCTAGAACCAAAGGAATTCTAGAGTTGAACAAAGTGCAGTTGTTGTATGAACAAATAGGACCGGAGGCAGACCCTAACCTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp AGTACCACACATATTGCACTTTTTGCCGAACGAAATTTTTACCTCACGTTCATCGAGGAAAGGGCTGTATaGCATCTGCTCGGAGGAAGG +
Preference number: 5 (lower is better)
Translates to: STTHIALFAERNFYLTFIEERAV*HLLGGR
Trigger: CCTTCCTCCGAGCAGATGCAATACAGCCCTTTCCTC...GATGAACGTGAGGTAAAAATTTCGTTCGGCAAAAAGTGCAATATGTGTGGTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp TTTTATTTCTCAAACTGCAGTCCCCGAAGTGAAGCAAACCTTTCTCTCCACTTCGAGTCTGCTGATAGGTaGAAACCTGCCTGGAGAAGA +
Preference number: 5 (lower is better)
Translates to: FYFSNCSPRSEANLSLHFESADR*KPAWRR
Trigger: TCTTCTCCAGGCAGGTTTCAACCTATCAGCAGACTC...GAAGTGGAGAGAAAGGTTTGCTTCACTTCGGGGACTGCAGTTTGAGAAATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp AAAGAATTAAAGCATGATCTGGGGGAAAGGCACCGCACTACCACTTCACATGGGACCAAAATGGGGGCTTaGTTTATACAGCTGTTTGCT +
Preference number: 5 (lower is better)
Translates to: KELKHDLGERHRTTTSHGTKMGA*FIQLFA
Trigger: AGCAAACAGCTGTATAAACAAAGCCCCCATTTTGGT...CCCATGTGAAGTGGTAGTGCGGTGCCTTTCCCCCAGATCATGCTTTAATTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS GCA 90 bp AACTATTCCCCCGTGGAAATCAATCCATTTTCTCCTATGAATAGCTaGTCAGGAACAGCCAGTCATAAGACGCTGAGTTCTAAGCAGTAC +
Preference number: 5 (lower is better)
Translates to: NYSPVEINPFSPMNS*SGTASHKTLSSKQY
Trigger: GTACTGCTTAGAACTCAGCGTCTTATGACTGGCTGTTCCTGAGCAGCTATTCATAGGAGAAAATGGATTGATTTCCACGGGGGAATAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533868.1
CDS-3UTR CAA 90 bp TTGCACTTTTTGCCGAACGAAATTTTTACCTCACGTTCATCTCACCAAAGTCTCAACAGCAGACAGGATTaGCCAGAATTTTCGCCTGGC +
Preference number: 5 (lower is better)
Translates to: LHFLPNEIFTSRSSHQSLNSRQD*PEFSPG
Trigger: GCCAGGCGAAAATTCTGGCAAATCCTGTCTGCTGTT...GAGACTTTGGTGAGATGAACGTGAGGTAAAAATTTCGTTCGGCAAAAAGTGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp AAGTGCTTGGTAAAACTAATGTACAAATATAAGCTATTGCTCCCTTGTGGGTGGTGCCTTGGCAACTGTTaGCTCAGCAATGGTGCTAGG +
Preference number: 5 (lower is better)
Translates to: KCLVKLMYKYKLLLPCGWCLGNC*LSNGAR
Trigger: CCTAGCACCATTGCTGAGCAAACAGTTGCCAAGGCA...CCACCCACAAGGGAGCAATAGCTTATATTTGTACATTAGTTTTACCAAGCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp AGTACCACACATATTGCACTTTTTGCCGAACGAAATTTTTACCTCACGTTCATCGCCTTGGGGGACAACTaGCATCAGCAGCTAAGAACT +
Preference number: 5 (lower is better)
Translates to: STTHIALFAERNFYLTFIALGDN*HQQLRT
Trigger: AGTTCTTAGCTGCTGATGCAAGTTGTCCCCCAAGGC...GATGAACGTGAGGTAAAAATTTCGTTCGGCAAAAAGTGCAATATGTGTGGTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp TTGCACTTTTTGCCGAACGAAATTTTTACCTCACGTTCATCTCACCAAAGTCTCGGACCAGTGTATCAGTaGCGTGGAGATACTAGAGAC +
Preference number: 5 (lower is better)
Translates to: LHFLPNEIFTSRSSHQSLGPVYQ*RGDTRD
Trigger: GTCTCTAGTATCTCCACGCAACTGATACACTGGTCC...GAGACTTTGGTGAGATGAACGTGAGGTAAAAATTTCGTTCGGCAAAAAGTGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp GAATCAGACTGGAAAGCAAGTCAGTACTTCAGAGTAGCCCCGCAGAAAAAGAGCGAGTGGAGAATAAGGTaGTGGGAACAATATCACATT +
Preference number: 5 (lower is better)
Translates to: ESDWKASQYFRVAPQKKSEWRIR*WEQYHI
Trigger: AATGTGATATTGTTCCCACAACCTTATTCTCCACTC...GCTCTTTTTCTGCGGGGCTACTCTGAAGTACTGACTTGCTTTCCAGTCTGATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp TTGCACTTTTTGCCGAACGAAATTTTTACCTCACGTTCATCTCACCAAAGTCTCCTCTACCCACCCACTTaGCCTCTGAAAAGACAGAGT +
Preference number: 5 (lower is better)
Translates to: LHFLPNEIFTSRSSHQSLLYPPT*PLKRQS
Trigger: ACTCTGTCTTTTCAGAGGCAAAGTGGGTGGGTAGAG...GAGACTTTGGTGAGATGAACGTGAGGTAAAAATTTCGTTCGGCAAAAAGTGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS TCA 90 bp TGCACTTTGTTCAACTCTAGAATTCCTTTGGTTCTAGCCAGATTCTaGAGATGTTGTCTAAATGCTACAATTCCCTGGGTGAGGGAGGTA +
Preference number: 5 (lower is better)
Translates to: CTLFNSRIPLVLARF*RCCLNATIPWVREV
Trigger: TACCTCCCTCACCCAGGGAATTGTAGCATTTAGACAACATCTTCAGAATCTGGCTAGAACCAAAGGAATTCTAGAGTTGAACAAAGTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp CAAACCTTTCTCTCCACTTCTTTCCCCTTCAGAGATTTTGGTGAAGGCAGGTTTCAGATTCTGAAGATGTaGTCTAAATGCTACAATTCC +
Preference number: 5 (lower is better)
Translates to: QTFLSTSFPFRDFGEGRFQILKM*SKCYNS
Trigger: GGAATTGTAGCATTTAGACAACATCTTCAGAATCTG...AAACCTGCCTTCACCAAAATCTCTGAAGGGGAAAGAAGTGGAGAGAAAGGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp TTTTATTTCTCAAACTGCAGTCCCCGAAGTGAAGCAAACCTTTCTCTCCACTTCTCACCAAGGTTGCCCTaGATAATAAACGGATGTAAT +
Preference number: 5 (lower is better)
Translates to: FYFSNCSPRSEANLSLHFSPRLP*IINGCN
Trigger: ATTACATCCGTTTATTATCAAGGGCAACCTTGGTGA...GAAGTGGAGAGAAAGGTTTGCTTCACTTCGGGGACTGCAGTTTGAGAAATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp AGTACCACACATATTGCACTTTTTGCCGAACGAAATTTTTACCTCACGTTCATCCTGCTTTCACCAAGGTaGCCCTTGATAATAAACGGA +
Preference number: 5 (lower is better)
Translates to: STTHIALFAERNFYLTFILLSPR*PLIING
Trigger: TCCGTTTATTATCAAGGGCAACCTTGGTGAAAGCAG...GATGAACGTGAGGTAAAAATTTCGTTCGGCAAAAAGTGCAATATGTGTGGTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS-3UTR CAA 90 bp AGTACCACACATATTGCACTTTTTGCCGAACGAAATTTTTACCTCACGTTCATCTTTCCTGATGTCTTCTaGATTTGCCTTGTAGCAATA +
Preference number: 5 (lower is better)
Translates to: STTHIALFAERNFYLTFIFPDVF*ICLVAI
Trigger: TATTGCTACAAGGCAAATCAAGAAGACATCAGGAAA...GATGAACGTGAGGTAAAAATTTCGTTCGGCAAAAAGTGCAATATGTGTGGTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS TCA 72 bp CCGGCCCGCGCTGCAAGTGCCTCGGGCCATCCGCCATaGCCATGCTGGGCCCCGCTGCTAGACACGGCGGAC +
Preference number: 6 (lower is better)
Translates to: PARAASASGHPP*PCWAPLLDTAD
Trigger: GTCCGCCGTGTCTAGCAGCGGGGCCCAGCATGGTCATGGCGGATGGCCCGAGGCACTTGCAGCGCGGGCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS CCA 72 bp CCAGGCTCTGCCGTGGGGACAGCTGGGGATGCACGCTaGCAGGGAGAGTGGAGACGCTTTCCTGCTGCTGAG +
Preference number: 6 (lower is better)
Translates to: PGSAVGTAGDAR*QGEWRRFPAAE
Trigger: CTCAGCAGCAGGAAAGCGTCTCCACTCTCCCTGCCAGCGTGCATCCCCAGCTGTCCCCACGGCAGAGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS CCA 72 bp CGTAGCTGGAGGGGGCCTCTTGCAGTCCTGGGCTTCTaGGACAGTCTGGCCCCGTTAGGTCGCTCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: RSWRGPLAVLGF*DSLAPLGRSAG
Trigger: CCCAGCAGAGCGACCTAACGGGGCCAGACTGTCCCAGAAGCCCAGGACTGCAAGAGGCCCCCTCCAGCTACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS TCA 72 bp GGGGAGGAGGGCAGATCGCAGCAGCCTCATGTTCGGTaGATGCATGGTCACTGGGAGCCCCACAGTCTGTGC +
Preference number: 6 (lower is better)
Translates to: GEEGRSQQPHVR*MHGHWEPHSLC
Trigger: GCACAGACTGTGGGGCTCCCAGTGACCATGCATTCACCGAACATGAGGCTGCTGCGATCTGCCCTCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS GCA 72 bp AGTGTGCCGTCTCTGCCCGCTGCGTGTGGACTGAAATaGCTCAAAGGCATGAGCGGGGTCTTCCTCGGCCTC +
Preference number: 6 (lower is better)
Translates to: SVPSLPAACGLK*LKGMSGVFLGL
Trigger: GAGGCCGAGGAAGACCCCGCTCATGCCTTTGAGGCATTTCAGTCCACACGCAGCGGGCAGAGACGGCACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304987.4
ENST00000533868.1
CDS CAA 90 bp GGGCTGAAGCTGCATCTCTTGGTACTGGCTGAGGAAAGGGCTGTATaGCATCTGCTCGGAGGAAGGCTCCAGGACGGGGCTCAGGGGCTG +
Preference number: 6 (lower is better)
Translates to: GLKLHLLVLAEERAV*HLLGGRLQDGAQGL
Trigger: CAGCCCCTGAGCCCCGTCCTGGAGCCTTCCTCCGAGCAGATGCAATACAGCCCTTTCCTCAGCCAGTACCAAGAGATGCAGCTTCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS GCA 72 bp TCTTGGTACTGGCTGAGGAAAGGGCTGTATTGCATCTaGTCGGAGGAAGGCTCCAGGACGGGGCTCAGGGGC +
Preference number: 6 (lower is better)
Translates to: SWYWLRKGLYCI*SEEGSRTGLRG
Trigger: GCCCCTGAGCCCCGTCCTGGAGCCTTCCTCCGAGCAGATGCAATACAGCCCTTTCCTCAGCCAGTACCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS CCA 72 bp TGGAGTCTCCTGGCGGGGAAGGGGCAGCTGCTGACTTaGCTGTGGGTAGGAGCTCTCTGCTATCTGCATCTG +
Preference number: 6 (lower is better)
Translates to: WSLLAGKGQLLT*LWVGALCYLHL
Trigger: CAGATGCAGATAGCAGAGAGCTCCTACCCACAGCCAAGTCAGCAGCTGCCCCTTCCCCGCCAGGAGACTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS CCA 72 bp TCTGCTGGGCTCCATCCACAGGATACTGACAGGGAGTaGGATAGTCTGGCGCAGGGGAAGCAGCGCTTGGCA +
Preference number: 6 (lower is better)
Translates to: SAGLHPQDTDRE*DSLAQGKQRLA
Trigger: TGCCAAGCGCTGCTTCCCCTGCGCCAGACTATCCCACTCCCTGTCAGTATCCTGTGGATGGAGCCCAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS TCA 72 bp TGCCCCAGGCATCACGACCAGTTGATTGGTCACTTCTaGCAGAGTGTGCCGTCTCTGCCCGCTGCGTGTGGA +
Preference number: 6 (lower is better)
Translates to: CPRHHDQLIGHF*QSVPSLPAACG
Trigger: TCCACACGCAGCGGGCAGAGACGGCACACTCTGTCAGAAGTGACCAATCAACTGGTCGTGATGCCTGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304987.4
ENST00000533868.1
CDS GCA 72 bp CTGGAGCTGAGGAGCCGCCGGCGCCAGGTTAGGGTCTaGCTCCGGTCCTATTTGTTCATACAACAACTGCAC +
Preference number: 6 (lower is better)
Translates to: LELRSRRRQVRV*LRSYLFIQQLH
Trigger: GTGCAGTTGTTGTATGAACAAATAGGACCGGAGGCAGACCCTAACCTGGCGCCGGCGGCTCCTCAGCTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS CCA 72 bp CCAGCCCTTCGTCAATGGAGGTCTCCATCATGTTGCTaGGCAGTGACTGGCATCCCTTCCGCACCAGGACAG +
Preference number: 6 (lower is better)
Translates to: PALRQWRSPSCC*AVTGIPSAPGQ
Trigger: CTGTCCTGGTGCGGAAGGGATGCCAGTCACTGCCCAGCAACATGATGGAGACCTCCATTGACGAAGGGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304987.4
ENST00000533868.1
CDS CCA 72 bp CCTCGGCCTCTCCTTCTGTCTCCAGCCCTTCGTCAATaGAGGTCTCCATCATGTTGCTGGGCAGTGACTGGC +
Preference number: 6 (lower is better)
Translates to: PRPLLLSPALRQ*RSPSCCWAVTG
Trigger: GCCAGTCACTGCCCAGCAACATGATGGAGACCTCCATTGACGAAGGGCTGGAGACAGAAGGAGAGGCCGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304987.4
ENST00000533868.1
CDS CCA 72 bp GTGGGGACAGCTGGGGATGCACGCTGGCAGGGAGAGTaGAGACGCTTTCCTGCTGCTGAGAAACTTCTTCCT +
Preference number: 6 (lower is better)
Translates to: VGTAGDARWQGE*RRFPAAEKLLP
Trigger: AGGAAGAAGTTTCTCAGCAGCAGGAAAGCGTCTCCACTCTCCCTGCCAGCGTGCATCCCCAGCTGTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS CAA 72 bp GTCTCCAGCCCTTCGTCAATGGAGGTCTCCATCATGTaGCTGGGCAGTGACTGGCATCCCTTCCGCACCAGG +
Preference number: 6 (lower is better)
Translates to: VSSPSSMEVSIM*LGSDWHPFRTR
Trigger: CCTGGTGCGGAAGGGATGCCAGTCACTGCCCAGCAACATGATGGAGACCTCCATTGACGAAGGGCTGGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304987.4
ENST00000533868.1
CDS CAA 90 bp TCTCCTTCTGTCTCCAGCCCTTCGTCAATGGAGGTCTCCATCATGTaGCTGGGCAGTGACTGGCATCCCTTCCGCACCAGGACAGGAGGC +
Preference number: 6 (lower is better)
Translates to: SPSVSSPSSMEVSIM*LGSDWHPFRTRTGG
Trigger: GCCTCCTGTCCTGGTGCGGAAGGGATGCCAGTCACTGCCCAGCAACATGATGGAGACCTCCATTGACGAAGGGCTGGAGACAGAAGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304987.4
ENST00000533868.1
CDS CAA 90 bp GTATCTGATGCTCTGCGGCCCTCTCTGAAGCTCACTGGAGACCTGTaGTGGACCTCTCGTTTCTGGGAGCTCAGAGCCTGCATGGCTGGG +
Preference number: 6 (lower is better)
Translates to: VSDALRPSLKLTGDL*WTSRFWELRACMAG
Trigger: CCCAGCCATGCAGGCTCTGAGCTCCCAGAAACGAGAGGTCCACAACAGGTCTCCAGTGAGCTTCAGAGAGGGCCGCAGAGCATCAGATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS CAA 90 bp GATACTGACAGGGAGTGGGATAGTCTGGCGCAGGGGAAGCAGCGCTaGGCAGCTCACAAGTCTGATAGGAGAACTGTAAGGGGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: DTDREWDSLAQGKQR*AAHKSDRRTVRGLG
Trigger: CCCCAGCCCCCTTACAGTTCTCCTATCAGACTTGTGAGCTGCCAAGCGCTGCTTCCCCTGCGCCAGACTATCCCACTCCCTGTCAGTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS TCA 72 bp GAATGCAGCTTCCGCCTGACAGCCAGATGCTGGAAATaGAAAGGCCTCCACGTTGGATGCCTGGGGGAGGAG +
Preference number: 6 (lower is better)
Translates to: ECSFRLTARCWK*KGLHVGCLGEE
Trigger: CTCCTCCCCCAGGCATCCAACGTGGAGGCCTTTTCATTTCCAGCATCTGGCTGTCAGGCGGAAGCTGCATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS GCA 72 bp ATGGTGCTAGGCCGACGCTGGCGGCCATCAAGTCTCTaGTCCACTGGGAAACTGCTCCGATGTGATTTCAGG +
Preference number: 6 (lower is better)
Translates to: MVLGRRWRPSSL*STGKLLRCDFR
Trigger: CCTGAAATCACATCGGAGCAGTTTCCCAGTGGAGCAGAGACTTGATGGCCGCCAGCGTCGGCCTAGCACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS GCA 72 bp TCTCCAGCCCTTCGTCAATGGAGGTCTCCATCATGTTaGTGGGCAGTGACTGGCATCCCTTCCGCACCAGGA +
Preference number: 6 (lower is better)
Translates to: SPALRQWRSPSC*WAVTGIPSAPG
Trigger: TCCTGGTGCGGAAGGGATGCCAGTCACTGCCCAGCAACATGATGGAGACCTCCATTGACGAAGGGCTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304987.4
ENST00000533868.1
CDS GCA 72 bp TGGTCACTTCTGACAGAGTGTGCCGTCTCTGCCCGCTaGGTGTGGACTGAAATGCCTCAAAGGCATGAGCGG +
Preference number: 6 (lower is better)
Translates to: WSLLTECAVSAR*VWTEMPQRHER
Trigger: CCGCTCATGCCTTTGAGGCATTTCAGTCCACACGCAGCGGGCAGAGACGGCACACTCTGTCAGAAGTGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304987.4
ENST00000533868.1
CDS GCA 72 bp TGCATCTCTTGGTACTGGCTGAGGAAAGGGCTGTATTaGATCTGCTCGGAGGAAGGCTCCAGGACGGGGCTC +
Preference number: 6 (lower is better)
Translates to: CISWYWLRKGLY*ICSEEGSRTGL
Trigger: GAGCCCCGTCCTGGAGCCTTCCTCCGAGCAGATGCAATACAGCCCTTTCCTCAGCCAGTACCAAGAGATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS CCA 72 bp GCAACTGTTTGCTCAGCAATGGTGCTAGGCCGACGCTaGCGGCCATCAAGTCTCTGCTCCACTGGGAAACTG +
Preference number: 6 (lower is better)
Translates to: ATVCSAMVLGRR*RPSSLCSTGKL
Trigger: CAGTTTCCCAGTGGAGCAGAGACTTGATGGCCGCCAGCGTCGGCCTAGCACCATTGCTGAGCAAACAGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS CCA 72 bp CTTCTGACAGAGTGTGCCGTCTCTGCCCGCTGCGTGTaGACTGAAATGCCTCAAAGGCATGAGCGGGGTCTT +
Preference number: 6 (lower is better)
Translates to: LLTECAVSARCV*TEMPQRHERGL
Trigger: AAGACCCCGCTCATGCCTTTGAGGCATTTCAGTCCACACGCAGCGGGCAGAGACGGCACACTCTGTCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304987.4
ENST00000533868.1
CDS CCA 72 bp TCCATCCACAGGATACTGACAGGGAGTGGGATAGTCTaGCGCAGGGGAAGCAGCGCTTGGCAGCTCACAAGT +
Preference number: 6 (lower is better)
Translates to: SIHRILTGSGIV*RRGSSAWQLTS
Trigger: ACTTGTGAGCTGCCAAGCGCTGCTTCCCCTGCGCCAGACTATCCCACTCCCTGTCAGTATCCTGTGGATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS CAA 72 bp CTGCATCTCTTGGTACTGGCTGAGGAAAGGGCTGTATaGCATCTGCTCGGAGGAAGGCTCCAGGACGGGGCT +
Preference number: 6 (lower is better)
Translates to: LHLLVLAEERAV*HLLGGRLQDGA
Trigger: AGCCCCGTCCTGGAGCCTTCCTCCGAGCAGATGCAATACAGCCCTTTCCTCAGCCAGTACCAAGAGATGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS GCA 72 bp GCTGGCGGCCATCAAGTCTCTGCTCCACTGGGAAACTaGTCCGATGTGATTTCAGGCGCTCCACCAACAAGA +
Preference number: 6 (lower is better)
Translates to: AGGHQVSAPLGN*SDVISGAPPTR
Trigger: TCTTGTTGGTGGAGCGCCTGAAATCACATCGGAGCAGTTTCCCAGTGGAGCAGAGACTTGATGGCCGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS CCA 72 bp CTCCTGGCGGGGAAGGGGCAGCTGCTGACTTGGCTGTaGGTAGGAGCTCTCTGCTATCTGCATCTGATTAAA +
Preference number: 6 (lower is better)
Translates to: LLAGKGQLLTWL*VGALCYLHLIK
Trigger: TTTAATCAGATGCAGATAGCAGAGAGCTCCTACCCACAGCCAAGTCAGCAGCTGCCCCTTCCCCGCCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS CAA 72 bp AGGGAGTGGGATAGTCTGGCGCAGGGGAAGCAGCGCTaGGCAGCTCACAAGTCTGATAGGAGAACTGTAAGG +
Preference number: 6 (lower is better)
Translates to: REWDSLAQGKQR*AAHKSDRRTVR
Trigger: CCTTACAGTTCTCCTATCAGACTTGTGAGCTGCCAAGCGCTGCTTCCCCTGCGCCAGACTATCCCACTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS CAA 90 bp TTGTGGACCTCTCGTTTCTGGGAGCTCAGAGCCTGCATGGCTGGGTaGGTAGGTCTCAGGCTTATGAAGGGAGATGTCATGCGGGGTGAA +
Preference number: 6 (lower is better)
Translates to: LWTSRFWELRACMAG*VGLRLMKGDVMRGE
Trigger: TTCACCCCGCATGACATCTCCCTTCATAAGCCTGAGACCTACCAACCCAGCCATGCAGGCTCTGAGCTCCCAGAAACGAGAGGTCCACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS GCA 72 bp CTGTTGTGGACCTCTCGTTTCTGGGAGCTCAGAGCCTaGATGGCTGGGTTGGTAGGTCTCAGGCTTATGAAG +
Preference number: 6 (lower is better)
Translates to: LLWTSRFWELRA*MAGLVGLRLMK
Trigger: CTTCATAAGCCTGAGACCTACCAACCCAGCCATGCAGGCTCTGAGCTCCCAGAAACGAGAGGTCCACAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS CCA 72 bp AAATTTTCCCTGCCCCAGGCATCACGACCAGTTGATTaGTCACTTCTGACAGAGTGTGCCGTCTCTGCCCGC +
Preference number: 6 (lower is better)
Translates to: KFSLPQASRPVD*SLLTECAVSAR
Trigger: GCGGGCAGAGACGGCACACTCTGTCAGAAGTGACCAATCAACTGGTCGTGATGCCTGGGGCAGGGAAAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304987.4
ENST00000533868.1
CDS TCA 72 bp TCCACACACTCTTCTTCCATGAATGCAGCTTCCGCCTaGCAGCCAGATGCTGGAAATGAAAAGGCCTCCACG +
Preference number: 6 (lower is better)
Translates to: STHSSSMNAASA*QPDAGNEKAST
Trigger: CGTGGAGGCCTTTTCATTTCCAGCATCTGGCTGTCAGGCGGAAGCTGCATTCATGGAAGAAGAGTGTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS CAA 90 bp AATACGGAATCCGGAATCTTCCTTCCAGAACCCTCTGCCTCAAAATaGGAAGAGTCGGTCCATCAAAGGGCAGAGCTCCACAGACAAGGA +
Preference number: 6 (lower is better)
Translates to: NTESGIFLPEPSASK*EESVHQRAELHRQG
Trigger: TCCTTGTCTGTGGAGCTCTGCCCTTTGATGGACCGACTCTTCCAATTTTGAGGCAGAGGGTTCTGGAAGGAAGATTCCGGATTCCGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS TCA 72 bp AGGCTTATGAAGGGAGATGTCATGCGGGGTGAAGGCTaGTTGGCTAACATGATGTCCTTAAGGGAAGGGTTG +
Preference number: 6 (lower is better)
Translates to: RLMKGDVMRGEG*LANMMSLREGL
Trigger: CAACCCTTCCCTTAAGGACATCATGTTAGCCAATCAGCCTTCACCCCGCATGACATCTCCCTTCATAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304987.4
ENST00000533868.1
CDS TCA 72 bp ATCAAGTCTCTGCTCCACTGGGAAACTGCTCCGATGTaGTTTCAGGCGCTCCACCAACAAGAAATAAATGGC +
Preference number: 6 (lower is better)
Translates to: IKSLLHWETAPM*FQALHQQEING
Trigger: GCCATTTATTTCTTGTTGGTGGAGCGCCTGAAATCACATCGGAGCAGTTTCCCAGTGGAGCAGAGACTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS CAA 72 bp CTGCTCATTAAACTCCCCGATGGATGGCTCATTTTCTaGCTCTTGTGGATAGAGAACAGGTCTCTGGACAGG +
Preference number: 6 (lower is better)
Translates to: LLIKLPDGWLIF*LLWIENRSLDR
Trigger: CCTGTCCAGAGACCTGTTCTCTATCCACAAGAGCAAGAAAATGAGCCATCCATCGGGGAGTTTAATGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS CAA 90 bp GTAGGAGCTCTCTGCTATCTGCATCTGATTAAAATAGGCCTGCAGTaGAGACTGCTTCTGAAGAAAGAGTCGCTTCTGCTGGAGCCTATG +
Preference number: 6 (lower is better)
Translates to: VGALCYLHLIKIGLQ*RLLLKKESLLLEPM
Trigger: CATAGGCTCCAGCAGAAGCGACTCTTTCTTCAGAAGCAGTCTCAACTGCAGGCCTATTTTAATCAGATGCAGATAGCAGAGAGCTCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS CAA 90 bp TCGCAGAACCTGCTCATTAAACTCCCCGATGGATGGCTCATTTTCTaGCTCTTGTGGATAGAGAACAGGTCTCTGGACAGGAACTTCTAT +
Preference number: 6 (lower is better)
Translates to: SQNLLIKLPDGWLIF*LLWIENRSLDRNFY
Trigger: ATAGAAGTTCCTGTCCAGAGACCTGTTCTCTATCCACAAGAGCAAGAAAATGAGCCATCCATCGGGGAGTTTAATGAGCAGGTTCTGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS CAA 90 bp AACCTGCTCATTAAACTCCCCGATGGATGGCTCATTTTCTTGCTCTaGTGGATAGAGAACAGGTCTCTGGACAGGAACTTCTATGAGCAT +
Preference number: 6 (lower is better)
Translates to: NLLIKLPDGWLIFLL*WIENRSLDRNFYEH
Trigger: ATGCTCATAGAAGTTCCTGTCCAGAGACCTGTTCTCTATCCACAAGAGCAAGAAAATGAGCCATCCATCGGGGAGTTTAATGAGCAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS TCA 72 bp ACTATTCCCCCGTGGAAATCAATCCATTTTCTCCTATaGATAGCTGCTCAGGAACAGCCAGTCATAAGACGC +
Preference number: 6 (lower is better)
Translates to: TIPPWKSIHFLL*IAAQEQPVIRR
Trigger: GCGTCTTATGACTGGCTGTTCCTGAGCAGCTATTCATAGGAGAAAATGGATTGATTTCCACGGGGGAATAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533868.1
CDS GCA 72 bp CCCGTGGAAATCAATCCATTTTCTCCTATGAATAGCTaGTCAGGAACAGCCAGTCATAAGACGCTGAGTTCT +
Preference number: 6 (lower is better)
Translates to: PVEINPFSPMNS*SGTASHKTLSS
Trigger: AGAACTCAGCGTCTTATGACTGGCTGTTCCTGAGCAGCTATTCATAGGAGAAAATGGATTGATTTCCACGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533868.1
CDS CCA 72 bp AAACTCCCCGATGGATGGCTCATTTTCTTGCTCTTGTaGATAGAGAACAGGTCTCTGGACAGGAACTTCTAT +
Preference number: 6 (lower is better)
Translates to: KLPDGWLIFLLL*IENRSLDRNFY
Trigger: ATAGAAGTTCCTGTCCAGAGACCTGTTCTCTATCCACAAGAGCAAGAAAATGAGCCATCCATCGGGGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS CAA 72 bp ATTAAACTCCCCGATGGATGGCTCATTTTCTTGCTCTaGTGGATAGAGAACAGGTCTCTGGACAGGAACTTC +
Preference number: 6 (lower is better)
Translates to: IKLPDGWLIFLL*WIENRSLDRNF
Trigger: GAAGTTCCTGTCCAGAGACCTGTTCTCTATCCACAAGAGCAAGAAAATGAGCCATCCATCGGGGAGTTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS GCA 72 bp GGGTCTGCCTCCGGTCCTATTTGTTCATACAACAACTaGACTTTGTTCAACTCTAGAATTCCTTTGGTTCTA +
Preference number: 6 (lower is better)
Translates to: GSASGPICSYNN*TLFNSRIPLVL
Trigger: TAGAACCAAAGGAATTCTAGAGTTGAACAAAGTGCAGTTGTTGTATGAACAAATAGGACCGGAGGCAGACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304987.4
CDS GCA 72 bp TATTTGTACTTCTCGGTAGATTTTCTCAAGGTTCACTaGATCCAGCTGAGACTTATCGATTATTTTTATTGC +
Preference number: 6 (lower is better)
Translates to: YLYFSVDFLKVH*IQLRLIDYFYC
Trigger: GCAATAAAAATAATCGATAAGTCTCAGCTGGATGCAGTGAACCTTGAGAAAATCTACCGAGAAGTACAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304987.4