Pregenerated sensors for SIGLEC8 (Homo sapiens)
Ensembl gene IDs: ENSG00000105366Ensembl transcript IDs: ENST00000321424.7, ENST00000430817.5
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCACAGTTCCACATGGCGGGGGAGGCCTCAGGAAACTTACAATCATaGCGGAAGGGGAACCAGGCACATCTTACATGGTGGCAGGCAAGA | + |
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Preference number: 1 (lower is better) Translates to: SQFHMAGEASGNLQS*RKGNQAHLTWWQAR Trigger: TCTTGCCTGCCACCATGTAAGATGTGCCTGGTTCCCCTTCCGCCATGATTGTAAGTTTCCTGAGGCCTCCCCCGCCATGTGGAACTGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| 3UTR CCA 90 bp | GGAAACTTACAATCATGGCGGAAGGGGAACCAGGCACATCTTACATaGTGGCAGGCAAGAGAGAAGAGCAGGGGAAACCACCACTTACAA | + |
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Preference number: 1 (lower is better) Translates to: GNLQSWRKGNQAHLT*WQAREKSRGNHHLQ Trigger: TTGTAAGTGGTGGTTTCCCCTGCTCTTCTCTCTTGCCTGCCACCATGTAAGATGTGCCTGGTTCCCCTTCCGCCATGATTGTAAGTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| 3UTR GCA 90 bp | TCTCCTCAGTGCACCTGTCTTGTTCCTGAGACTCTAGGCCATTGCTaGTCCCTCTTTTGTAAAAGTCAATGCCCTCAAGGAATTTATTTC | + |
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Preference number: 1 (lower is better) Translates to: SPQCTCLVPETLGHC*SLFCKSQCPQGIYF Trigger: GAAATAAATTCCTTGAGGGCATTGACTTTTACAAAAGAGGGAGCAGCAATGGCCTAGAGTCTCAGGAACAAGACAGGTGCACTGAGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| 3UTR GCA 90 bp | TCATCTCCTCAGTGCACCTGTCTTGTTCCTGAGACTCTAGGCCATTaGTGCTCCCTCTTTTGTAAAAGTCAATGCCCTCAAGGAATTTAT | + |
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Preference number: 1 (lower is better) Translates to: SSPQCTCLVPETLGH*CSLFCKSQCPQGIY Trigger: ATAAATTCCTTGAGGGCATTGACTTTTACAAAAGAGGGAGCAGCAATGGCCTAGAGTCTCAGGAACAAGACAGGTGCACTGAGGAGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| 3UTR-3UTR TCA 90 bp | AGACCCGCCATACAGGTTGGGCAGGGGGTCCCGGCCTTCATCTCCTCAGTGCACAGGTGGAGGTTGCAGTaGGCAGAGATTGAACCACTG | + |
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Preference number: 2 (lower is better) Translates to: RPAIQVGQGVPAFISSVHRWRLQ*AEIEPL Trigger: CAGTGGTTCAATCTCTGCTCACTGCAACCTCCACCT...GTGCACTGAGGAGATGAAGGCCGGGACCCCCTGCCCAACCTGTATGGCGGGTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| 3UTR-3UTR CCA 90 bp | CACAGTTCCACATGGCGGGGGAGGCCTCAGGAAACTTACAATCATGGCGGAAGGCATTGGTCCAAGTTTTaGTTAGACAGGAGGAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: HSSTWRGRPQETYNHGGRHWSKF*LDRRRE Trigger: CTCCCTCCTCCTGTCTAACCAAAACTTGGACCAATG...CCTTCCGCCATGATTGTAAGTTTCCTGAGGCCTCCCCCGCCATGTGGAACTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| 3UTR-3UTR TCA 90 bp | CCCACCAGGTCCCTCCCCCAACACATGGGGATTATAATTCTGATTACAATTCTAGGCAGGAGAATCGTTTaGACCCAGGAGGTGGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: PTRSLPQHMGIIILITILGRRIV*TQEVEV Trigger: AACCTCCACCTCCTGGGTTCAAACGATTCTCCTGCC...TAGAATTGTAATCAGAATTATAATCCCCATGTGTTGGGGGAGGGACCTGGTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| 3UTR-3UTR CCA 90 bp | GCCATTGCTGCTCCCTCTTTTGTAAAAGTCAATGCCCTCAAGGAATTTATTTCCTCGAGAGGAGAATGGTaGGTAGTAGAAGCTAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: AIAAPSFVKVNALKEFISSRGEW*VVEARG Trigger: GCCTCTAGCTTCTACTACCCACCATTCTCCTCTCGA...GGAAATAAATTCCTTGAGGGCATTGACTTTTACAAAAGAGGGAGCAGCAATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| 3UTR GCA 72 bp | AGGTTGGGCAGGGGGTCCCGGCCTTCATCTCCTCAGTaGACCTGTCTTGTTCCTGAGACTCTAGGCCATTGC | + |
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Preference number: 3 (lower is better) Translates to: RLGRGSRPSSPQ*TCLVPETLGHC Trigger: GCAATGGCCTAGAGTCTCAGGAACAAGACAGGTGCACTGAGGAGATGAAGGCCGGGACCCCCTGCCCAACCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| 3UTR CCA 72 bp | CACATGGCGGGGGAGGCCTCAGGAAACTTACAATCATaGCGGAAGGGGAACCAGGCACATCTTACATGGTGG | + |
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Preference number: 3 (lower is better) Translates to: HMAGEASGNLQS*RKGNQAHLTWW Trigger: CCACCATGTAAGATGTGCCTGGTTCCCCTTCCGCCATGATTGTAAGTTTCCTGAGGCCTCCCCCGCCATGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| 3UTR CCA 72 bp | CACATGGCGGGGGAGGCCTCAGGAAACTTACAATCATaGCGGAAGGGGAACCAGGCACATTGCATAGCATGG | + |
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Preference number: 3 (lower is better) Translates to: HMAGEASGNLQS*RKGNQAHCIAW Trigger: CCATGCTATGCAATGTGCCTGGTTCCCCTTCCGCCATGATTGTAAGTTTCCTGAGGCCTCCCCCGCCATGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000430817.5 |
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| 3UTR TCA 72 bp | GTCCTGAGTAGCCGAGTGGCCTTGAGAGAGACCCAGTaGGATTTCCACACCCGGATACATCGTGGAACCATC | + |
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Preference number: 3 (lower is better) Translates to: VLSSRVALRETQ*DFHTRIHRGTI Trigger: GATGGTTCCACGATGTATCCGGGTGTGGAAATCTCACTGGGTCTCTCTCAAGGCCACTCGGCTACTCAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| CDS-3UTR CCA 90 bp | AGACCCGCCATACAGGTTGGGCAGGGGGTCCCGGCCTTCATCTCCTCAGTGCACCGAGGCGGACGGTACTaGTCGTGGTCACACCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: RPAIQVGQGVPAFISSVHRGGRY*SWSHLS Trigger: GGACAGGTGTGACCACGACCAGTACCGTCCGCCTCG...GTGCACTGAGGAGATGAAGGCCGGGACCCCCTGCCCAACCTGTATGGCGGGTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| CDS-3UTR CCA 90 bp | TTCCACATGGCGGGGGAGGCCTCAGGAAACTTACAATCATGGCGGAAGGGGAACACCCGCCATACAGGTTaGGCAGGGGGTCCCGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: FHMAGEASGNLQSWRKGNTRHTG*AGGPGL Trigger: AAGGCCGGGACCCCCTGCCCAACCTGTATGGCGGGT...GTTCCCCTTCCGCCATGATTGTAAGTTTCCTGAGGCCTCCCCCGCCATGTGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| CDS-3UTR CCA 90 bp | TCCACATGGCGGGGGAGGCCTCAGGAAACTTACAATCATGGCGGAAGGGGAACCGGACGGTACTGGTCGTaGTCACACCTGTCCCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: STWRGRPQETYNHGGRGTGRYWS*SHLSQA Trigger: TGCCTGGGACAGGTGTGACCACGACCAGTACCGTCC...GGTTCCCCTTCCGCCATGATTGTAAGTTTCCTGAGGCCTCCCCCGCCATGTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| CDS-3UTR TCA 90 bp | CACAGTTCCACATGGCGGGGGAGGCCTCAGGAAACTTACAATCATGGCGGAAGGGAGAGGCCGAGCCCCTaGTGGCCTTTGCATCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: HSSTWRGRPQETYNHGGRERPSP*WPLHLP Trigger: TGGAAGATGCAAAGGCCATCAGGGGCTCGGCCTCTC...CCTTCCGCCATGATTGTAAGTTTCCTGAGGCCTCCCCCGCCATGTGGAACTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000321424.7 ENST00000430817.5 |
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| CDS-3UTR TCA 90 bp | TTGACTCACAGTTCCACATGGCGGGGGAGGCCTCAGGAAACTTACAATCATGGCCTCTCCTTCCTCCCCTaGCGAGGGGGCAACAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: LTHSSTWRGRPQETYNHGLSFLP*RGGNSW Trigger: CCAGCTGTTGCCCCCTCGTCAGGGGAGGAAGGAGAG...GCCATGATTGTAAGTTTCCTGAGGCCTCCCCCGCCATGTGGAACTGTGAGTCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000321424.7 ENST00000430817.5 |
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| CDS-3UTR GCA 90 bp | CCACATGGCGGGGGAGGCCTCAGGAAACTTACAATCATGGCGGAAGGGGAACCAGTCTTGAGGTGCCTGTaGCCTCATTCTGCAGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: PHGGGGLRKLTIMAEGEPVLRCL*PHSAGR Trigger: TCTCCCTGCAGAATGAGGGCACAGGCACCTCAAGAC...TGGTTCCCCTTCCGCCATGATTGTAAGTTTCCTGAGGCCTCCCCCGCCATGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000321424.7 ENST00000430817.5 |
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| CDS-3UTR CCA 90 bp | TCCACATGGCGGGGGAGGCCTCAGGAAACTTACAATCATGGCGGAAGGGGAACCTGGAGCGTCTTGGTATaGTCTGTCTCCTGCCCGGAA | + |
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Preference number: 4 (lower is better) Translates to: STWRGRPQETYNHGGRGTWSVLV*SVSCPE Trigger: TTCCGGGCAGGAGACAGACCATACCAAGACGCTCCA...GGTTCCCCTTCCGCCATGATTGTAAGTTTCCTGAGGCCTCCCCCGCCATGTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000321424.7 ENST00000430817.5 |
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| CDS-3UTR CCA 90 bp | CCACATGGCGGGGGAGGCCTCAGGAAACTTACAATCATGGCGGAAGGGGAACCATGGAGCGTCTTGGTATaGTCTGTCTCCTGCCCGGAA | + |
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Preference number: 4 (lower is better) Translates to: PHGGGGLRKLTIMAEGEPWSVLV*SVSCPE Trigger: TTCCGGGCAGGAGACAGACCATACCAAGACGCTCCA...TGGTTCCCCTTCCGCCATGATTGTAAGTTTCCTGAGGCCTCCCCCGCCATGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000321424.7 ENST00000430817.5 |
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| CDS-3UTR CCA 90 bp | CCACATGGCGGGGGAGGCCTCAGGAAACTTACAATCATGGCGGAAGGGGAACCAGGGCTGTGGATGCTGTaGCATCTCCTTGGAAGACAG | + |
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Preference number: 4 (lower is better) Translates to: PHGGGGLRKLTIMAEGEPGLWML*HLLGRQ Trigger: CTGTCTTCCAAGGAGATGCCACAGCATCCACAGCCC...TGGTTCCCCTTCCGCCATGATTGTAAGTTTCCTGAGGCCTCCCCCGCCATGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| CDS-3UTR TCA 90 bp | CAGTTCCACATGGCGGGGGAGGCCTCAGGAAACTTACAATCATGGCGGAAGGGGCACCTGTCTTGTTCCTaGGACTCTAGGCCATTGCTG | + |
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Preference number: 4 (lower is better) Translates to: QFHMAGEASGNLQSWRKGHLSCS*DSRPLL Trigger: CAGCAATGGCCTAGAGTCTCAGGAACAAGACAGGTG...CCCCTTCCGCCATGATTGTAAGTTTCCTGAGGCCTCCCCCGCCATGTGGAACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| CDS-3UTR GCA 90 bp | CGGGGGAGGCCTCAGGAAACTTACAATCATGGCGGAAGGGGAACCAGGCACATTGTATGGTCTGTCTCCTaGCCGGAACCAGTAGCCATG | + |
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Preference number: 4 (lower is better) Translates to: RGRPQETYNHGGRGTRHIVWSVS*PEPVAM Trigger: CATGGCTACTGGTTCCGGGCAGGAGACAGACCATAC...AATGTGCCTGGTTCCCCTTCCGCCATGATTGTAAGTTTCCTGAGGCCTCCCCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000430817.5 |
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| CDS-3UTR GCA 90 bp | TTCCACATGGCGGGGGAGGCCTCAGGAAACTTACAATCATGGCGGAAGGGGAACTCCCAGGGCTGTGGATaGTGTGGCATCTCCTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: FHMAGEASGNLQSWRKGNSQGCG*CGISLE Trigger: TTCCAAGGAGATGCCACAGCATCCACAGCCCTGGGA...GTTCCCCTTCCGCCATGATTGTAAGTTTCCTGAGGCCTCCCCCGCCATGTGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| CDS-3UTR GCA 90 bp | CGGGGGAGGCCTCAGGAAACTTACAATCATGGCGGAAGGGGAACCAGGCACATTGTCTTGAGGTGCCTGTaGCCTCATTCTGCAGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: RGRPQETYNHGGRGTRHIVLRCL*PHSAGR Trigger: TCTCCCTGCAGAATGAGGGCACAGGCACCTCAAGAC...AATGTGCCTGGTTCCCCTTCCGCCATGATTGTAAGTTTCCTGAGGCCTCCCCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000430817.5 |
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| CDS-3UTR GCA 90 bp | AGACCCGCCATACAGGTTGGGCAGGGGGTCCCGGCCTTCATCTCCTCAGTGCACGAGACTCTAGGCCATTaGTGCTCCCTCTTTTGTAAA | + |
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Preference number: 4 (lower is better) Translates to: RPAIQVGQGVPAFISSVHETLGH*CSLFCK Trigger: TTTACAAAAGAGGGAGCAGCAATGGCCTAGAGTCTC...GTGCACTGAGGAGATGAAGGCCGGGACCCCCTGCCCAACCTGTATGGCGGGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| CDS-3UTR GCA 90 bp | CAGTTCCACATGGCGGGGGAGGCCTCAGGAAACTTACAATCATGGCGGAAGGGGTCCCAGGGCTGTGGATaGTGTCACAAACACAGACAG | + |
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Preference number: 4 (lower is better) Translates to: QFHMAGEASGNLQSWRKGSQGCG*CHKHRQ Trigger: CTGTCTGTGTTTGTGACAGCATCCACAGCCCTGGGA...CCCCTTCCGCCATGATTGTAAGTTTCCTGAGGCCTCCCCCGCCATGTGGAACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000430817.5 |
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| CDS-3UTR TCA 90 bp | AGAGGTGTAATTGACTCACAGTTCCACATGGCGGGGGAGGCCTCAGGAAACTTAGAGAGGCCGAGCCCCTaGTGGCCTTTGCATCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: RGVIDSQFHMAGEASGNLERPSP*WPLHLP Trigger: TGGAAGATGCAAAGGCCATCAGGGGCTCGGCCTCTC...TAAGTTTCCTGAGGCCTCCCCCGCCATGTGGAACTGTGAGTCAATTACACCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000321424.7 ENST00000430817.5 |
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| CDS-3UTR TCA 90 bp | ATAAATGAAAGAGGTGTAATTGACTCACAGTTCCACATGGCGGGGGAGGCCTCATCAGTCAGGGGTCCCTaGGAGGCCGAGCCCCTGATG | + |
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Preference number: 4 (lower is better) Translates to: INERGVIDSQFHMAGEASSVRGP*EAEPLM Trigger: CATCAGGGGCTCGGCCTCTCAGGGACCCCTGACTGA...TGAGGCCTCCCCCGCCATGTGGAACTGTGAGTCAATTACACCTCTTTCATTTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000321424.7 ENST00000430817.5 |
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| CDS-3UTR TCA 90 bp | CACAGTTCCACATGGCGGGGGAGGCCTCAGGAAACTTACAATCATGGCGGAAGGAGGTGGAGGTTGCAGTaGGCAGAGATTGAACCACTG | + |
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Preference number: 4 (lower is better) Translates to: HSSTWRGRPQETYNHGGRRWRLQ*AEIEPL Trigger: CAGTGGTTCAATCTCTGCTCACTGCAACCTCCACCT...CCTTCCGCCATGATTGTAAGTTTCCTGAGGCCTCCCCCGCCATGTGGAACTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| CDS-3UTR GCA 90 bp | CAGTTCCACATGGCGGGGGAGGCCTCAGGAAACTTACAATCATGGCGGAAGGGGCCTTCATCTCCTCAGTaGACCTGTCTTGTTCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: QFHMAGEASGNLQSWRKGPSSPQ*TCLVPE Trigger: CTCAGGAACAAGACAGGTGCACTGAGGAGATGAAGG...CCCCTTCCGCCATGATTGTAAGTTTCCTGAGGCCTCCCCCGCCATGTGGAACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| CDS-3UTR CCA 90 bp | TTGACTCACAGTTCCACATGGCGGGGGAGGCCTCAGGAAACTTACAATCATGGCGCCACTGGAGCGTCTTaGTATGGTCTGTCTCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: LTHSSTWRGRPQETYNHGATGAS*YGLSPA Trigger: GGCAGGAGACAGACCATACCAAGACGCTCCAGTGGC...GCCATGATTGTAAGTTTCCTGAGGCCTCCCCCGCCATGTGGAACTGTGAGTCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000321424.7 ENST00000430817.5 |
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| CDS-3UTR CCA 90 bp | TGGCGGGGGAGGCCTCAGGAAACTTACAATCATGGCGGAAGGGGAACCAGGCACCATTGGTCCAAGTTTTaGTTAGACAGGAGGAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: WRGRPQETYNHGGRGTRHHWSKF*LDRRRE Trigger: CTCCCTCCTCCTGTCTAACCAAAACTTGGACCAATG...GTGCCTGGTTCCCCTTCCGCCATGATTGTAAGTTTCCTGAGGCCTCCCCCGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| CDS-3UTR CCA 90 bp | GTAGAAGCTAGAGGCAGGGATGGGTCCCTGGTAGCCGGGGAAAGGGGAGACATTTCGAGAGGAGAATGGTaGGTAGTAGAAGCTAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: VEARGRDGSLVAGERGDISRGEW*VVEARG Trigger: GCCTCTAGCTTCTACTACCCACCATTCTCCTCTCGA...AATGTCTCCCCTTTCCCCGGCTACCAGGGACCCATCCCTGCCTCTAGCTTCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| CDS-3UTR CCA 90 bp | CACATGGCGGGGGAGGCCTCAGGAAACTTACAATCATGGCGGAAGGGGAACCAGCAGGCACATCTTACATaGTGGCAGGCAAGAGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: HMAGEASGNLQSWRKGNQQAHLT*WQAREK Trigger: CTTCTCTCTTGCCTGCCACCATGTAAGATGTGCCTG...CTGGTTCCCCTTCCGCCATGATTGTAAGTTTCCTGAGGCCTCCCCCGCCATGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| CDS-3UTR TCA 90 bp | CCCACCAGGTCCCTCCCCCAACACATGGGGATTATAATTCTGATTACAATTCTATCAGTCAGGGGTCCCTaGGAGGCCGAGCCCCTGATG | + |
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Preference number: 4 (lower is better) Translates to: PTRSLPQHMGIIILITILSVRGP*EAEPLM Trigger: CATCAGGGGCTCGGCCTCTCAGGGACCCCTGACTGA...TAGAATTGTAATCAGAATTATAATCCCCATGTGTTGGGGGAGGGACCTGGTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| CDS-3UTR TCA 90 bp | CACATGGCGGGGGAGGCCTCAGGAAACTTACAATCATGGCGGAAGGGGAACCAGGAGGCAAGTACCACATaGCCTCATCTCTATGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: HMAGEASGNLQSWRKGNQEASTT*PHLYVE Trigger: TTCCACATAGAGATGAGGTCATGTGGTACTTGCCTC...CTGGTTCCCCTTCCGCCATGATTGTAAGTTTCCTGAGGCCTCCCCCGCCATGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| CDS-3UTR TCA 90 bp | AGACCCGCCATACAGGTTGGGCAGGGGGTCCCGGCCTTCATCTCCTCAGTGCACCTTGATTCTGTCATTTaGGAGAACATGGATGAACCT | + |
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Preference number: 4 (lower is better) Translates to: RPAIQVGQGVPAFISSVHLDSVI*ENMDEP Trigger: AGGTTCATCCATGTTCTCTCAAATGACAGAATCAAG...GTGCACTGAGGAGATGAAGGCCGGGACCCCCTGCCCAACCTGTATGGCGGGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| CDS-3UTR CCA 90 bp | CACATGGCGGGGGAGGCCTCAGGAAACTTACAATCATGGCGGAAGGGGAACCAGGTTTGGCAACACTCATaGCATGGCACATGTAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: HMAGEASGNLQSWRKGNQVWQHS*HGTCKS Trigger: GCTCTTACATGTGCCATGCCATGAGTGTTGCCAAAC...CTGGTTCCCCTTCCGCCATGATTGTAAGTTTCCTGAGGCCTCCCCCGCCATGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000430817.5 |
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| CDS-3UTR CCA 90 bp | CTTGAGAGAGACCCAGTGAGATTTCCACACCCGGATACATCGTGGAACCATCAAGCCACTGGAGCGTCTTaGTATGGTCTGTCTCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: LERDPVRFPHPDTSWNHQATGAS*YGLSPA Trigger: GGCAGGAGACAGACCATACCAAGACGCTCCAGTGGC...TTGATGGTTCCACGATGTATCCGGGTGTGGAAATCTCACTGGGTCTCTCTCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| CDS-3UTR CCA 90 bp | GTAGAAGCTAGAGGCAGGGATGGGTCCCTGGTAGCCGGGGAAAGGGGAGACATTGGAAAGGGGAGACATTaGTCCAAGTTTTGGTTAGAC | + |
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Preference number: 4 (lower is better) Translates to: VEARGRDGSLVAGERGDIGKGRH*SKFWLD Trigger: GTCTAACCAAAACTTGGACCAATGTCTCCCCTTTCC...AATGTCTCCCCTTTCCCCGGCTACCAGGGACCCATCCCTGCCTCTAGCTTCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| CDS-3UTR CCA 90 bp | AGAGGTGTAATTGACTCACAGTTCCACATGGCGGGGGAGGCCTCAGGAAACTTACATTTCCCAGGGCTGTaGATGCTGTGGCATCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: RGVIDSQFHMAGEASGNLHFPGL*MLWHLL Trigger: AAGGAGATGCCACAGCATCCACAGCCCTGGGAAATG...TAAGTTTCCTGAGGCCTCCCCCGCCATGTGGAACTGTGAGTCAATTACACCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| CDS-3UTR CCA 90 bp | AGAGGTGTAATTGACTCACAGTTCCACATGGCGGGGGAGGCCTCAGGAAACTTAACAGGGGTGCATGTTTaGCAACACTCATGGCATGGC | + |
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Preference number: 4 (lower is better) Translates to: RGVIDSQFHMAGEASGNLTGVHV*QHSWHG Trigger: GCCATGCCATGAGTGTTGCCAAACATGCACCCCTGT...TAAGTTTCCTGAGGCCTCCCCCGCCATGTGGAACTGTGAGTCAATTACACCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000430817.5 |
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| CDS-3UTR GCA 90 bp | ATTGACTCACAGTTCCACATGGCGGGGGAGGCCTCAGGAAACTTACAATCATGGATACAGGTCTTGAGGTaGCTGTGCCCTCATTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: IDSQFHMAGEASGNLQSWIQVLR*LCPHSA Trigger: TGCAGAATGAGGGCACAGGCACCTCAAGACCTGTAT...CCATGATTGTAAGTTTCCTGAGGCCTCCCCCGCCATGTGGAACTGTGAGTCAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000321424.7 ENST00000430817.5 |
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| CDS-3UTR GCA 90 bp | AGAGGTGTAATTGACTCACAGTTCCACATGGCGGGGGAGGCCTCAGGAAACTTAGCTTCTTCAGGGGGTTaGCATCTTTCCAGGATTCAG | + |
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Preference number: 4 (lower is better) Translates to: RGVIDSQFHMAGEASGNLASSGG*HLSRIQ Trigger: CTGAATCCTGGAAAGATGGCAACCCCCTGAAGAAGC...TAAGTTTCCTGAGGCCTCCCCCGCCATGTGGAACTGTGAGTCAATTACACCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000321424.7 ENST00000430817.5 |
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| CDS-3UTR TCA 90 bp | CCCACCAGGTCCCTCCCCCAACACATGGGGATTATAATTCTGATTACAATTCTAGTAGCCGAGTGGCCTTaGGAGAGACCCAGTGAGATT | + |
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Preference number: 4 (lower is better) Translates to: PTRSLPQHMGIIILITILVAEWP*ERPSEI Trigger: AATCTCACTGGGTCTCTCTCAAGGCCACTCGGCTAC...TAGAATTGTAATCAGAATTATAATCCCCATGTGTTGGGGGAGGGACCTGGTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| CDS-3UTR GCA 90 bp | CCCACCAGGTCCCTCCCCCAACACATGGGGATTATAATTCTGATTACAATTCTAGTATGGTCTGTCTCCTaGCCGGAACCAGTAGCCATG | + |
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Preference number: 4 (lower is better) Translates to: PTRSLPQHMGIIILITILVWSVS*PEPVAM Trigger: CATGGCTACTGGTTCCGGGCAGGAGACAGACCATAC...TAGAATTGTAATCAGAATTATAATCCCCATGTGTTGGGGGAGGGACCTGGTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| CDS-3UTR GCA 90 bp | CTTGAGAGAGACCCAGTGAGATTTCCACACCCGGATACATCGTGGAACCATCAAGCTTCTTCAGGGGGTTaGCATCTTTCCAGGATTCAG | + |
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Preference number: 4 (lower is better) Translates to: LERDPVRFPHPDTSWNHQASSGG*HLSRIQ Trigger: CTGAATCCTGGAAAGATGGCAACCCCCTGAAGAAGC...TTGATGGTTCCACGATGTATCCGGGTGTGGAAATCTCACTGGGTCTCTCTCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| CDS-3UTR GCA 90 bp | TGGCAACACTCATGGCATGGCACATGTAAGAGCTGCGTGATTCAACTGAAAAGCATACAGGTCTTGAGGTaGCTGTGCCCTCATTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: WQHSWHGTCKSCVIQLKSIQVLR*LCPHSA Trigger: TGCAGAATGAGGGCACAGGCACCTCAAGACCTGTAT...GCTTTTCAGTTGAATCACGCAGCTCTTACATGTGCCATGCCATGAGTGTTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430817.5 |
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| CDS-3UTR CCA 90 bp | TGGCAACACTCATGGCATGGCACATGTAAGAGCTGCGTGATTCAACTGAAAAGCCATTTCCCAGGGCTGTaGATGCTGTCACAAACACAG | + |
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Preference number: 4 (lower is better) Translates to: WQHSWHGTCKSCVIQLKSHFPGL*MLSQTQ Trigger: CTGTGTTTGTGACAGCATCCACAGCCCTGGGAAATG...GCTTTTCAGTTGAATCACGCAGCTCTTACATGTGCCATGCCATGAGTGTTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430817.5 |
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| CDS-3UTR GCA 90 bp | AGAGGTGTAATTGACTCACAGTTCCACATGGCGGGGGAGGCCTCAGGAAACTTAACTCTAGGCCATTGCTaGTCCCTCTTTTGTAAAAGT | + |
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Preference number: 4 (lower is better) Translates to: RGVIDSQFHMAGEASGNLTLGHC*SLFCKS Trigger: ACTTTTACAAAAGAGGGAGCAGCAATGGCCTAGAGT...TAAGTTTCCTGAGGCCTCCCCCGCCATGTGGAACTGTGAGTCAATTACACCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| CDS-3UTR TCA 90 bp | ATAAATGAAAGAGGTGTAATTGACTCACAGTTCCACATGGCGGGGGAGGCCTCAAGGGTTCTTGTTCTATaGGAATCAGCCTCTGACTTC | + |
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Preference number: 4 (lower is better) Translates to: INERGVIDSQFHMAGEASRVLVL*ESASDF Trigger: GAAGTCAGAGGCTGATTCTCATAGAACAAGAACCCT...TGAGGCCTCCCCCGCCATGTGGAACTGTGAGTCAATTACACCTCTTTCATTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000321424.7 ENST00000430817.5 |
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| CDS-3UTR TCA 90 bp | GTGCATGTTTGGCAACACTCATGGCATGGCACATGTAAGAGCTGCGTGATTCAAAGGGTTCTTGTTCTATaGGAATCAGCCTCTGACTTC | + |
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Preference number: 4 (lower is better) Translates to: VHVWQHSWHGTCKSCVIQRVLVL*ESASDF Trigger: GAAGTCAGAGGCTGATTCTCATAGAACAAGAACCCT...TTGAATCACGCAGCTCTTACATGTGCCATGCCATGAGTGTTGCCAAACATGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000430817.5 |
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| CDS-3UTR CCA 90 bp | CCCACCAGGTCCCTCCCCCAACACATGGGGATTATAATTCTGATTACAATTCTAATTCTAGATAAGATTTaGGTGGGGACACAGCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: PTRSLPQHMGIIILITILILDKI*VGTQPN Trigger: GTTTGGCTGTGTCCCCACCCAAATCTTATCTAGAAT...TAGAATTGTAATCAGAATTATAATCCCCATGTGTTGGGGGAGGGACCTGGTGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| CDS-3UTR GCA 90 bp | GCCATTGCTGCTCCCTCTTTTGTAAAAGTCAATGCCCTCAAGGAATTTATTTCCCTTGAAAATATTCAATaGAAGCTGGGTGCGGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: AIAAPSFVKVNALKEFISLENIQ*KLGAVA Trigger: AGCCACCGCACCCAGCTTGCATTGAATATTTTCAAG...GGAAATAAATTCCTTGAGGGCATTGACTTTTACAAAAGAGGGAGCAGCAATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| CDS-3UTR CAA 90 bp | CCACATGGCGGGGGAGGCCTCAGGAAACTTACAATCATGGCGGAAGGGGAACCAGGCCACTGGAGCGTCTaGGTATGGTCTGTCTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: PHGGGGLRKLTIMAEGEPGHWSV*VWSVSC Trigger: GCAGGAGACAGACCATACCAAGACGCTCCAGTGGCC...TGGTTCCCCTTCCGCCATGATTGTAAGTTTCCTGAGGCCTCCCCCGCCATGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000321424.7 ENST00000430817.5 |
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| CDS-3UTR CAA 90 bp | GAAACTTACAATCATGGCGGAAGGGGAACCAGGCACATCTTACATGGTGGCAGGGACCCGCCATACAGGTaGGGCAGGGGGTCCCGGCCT | + |
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Preference number: 5 (lower is better) Translates to: ETYNHGGRGTRHILHGGRDPPYR*GRGSRP Trigger: AGGCCGGGACCCCCTGCCCAACCTGTATGGCGGGTC...CCTGCCACCATGTAAGATGTGCCTGGTTCCCCTTCCGCCATGATTGTAAGTTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| CDS-3UTR CAA 90 bp | GAGAGAGACCCAGTGAGATTTCCACACCCGGATACATCGTGGAACCATCAAGGCGCAGCATGTCTGGGTTaGAAGGCGCCAGGGCCGCCA | + |
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Preference number: 5 (lower is better) Translates to: ERDPVRFPHPDTSWNHQGAACLG*KAPGPP Trigger: TGGCGGCCCTGGCGCCTTCAAACCCAGACATGCTGC...GCCTTGATGGTTCCACGATGTATCCGGGTGTGGAAATCTCACTGGGTCTCTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| CDS-3UTR CAA 90 bp | ATTGACTCACAGTTCCACATGGCGGGGGAGGCCTCAGGAAACTTACAATCATGGGCAGCATGTCTGGGTTaGAAGGCGCCAGGGCCGCCA | + |
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Preference number: 5 (lower is better) Translates to: IDSQFHMAGEASGNLQSWAACLG*KAPGPP Trigger: TGGCGGCCCTGGCGCCTTCAAACCCAGACATGCTGC...CCATGATTGTAAGTTTCCTGAGGCCTCCCCCGCCATGTGGAACTGTGAGTCAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000321424.7 ENST00000430817.5 |
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| CDS-3UTR CAA 90 bp | TTCCACATGGCGGGGGAGGCCTCAGGAAACTTACAATCATGGCGGAAGGGGAACCACCAGCTCCTGCACTaGCAGCAAGTAACCATCCCC | + |
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Preference number: 5 (lower is better) Translates to: FHMAGEASGNLQSWRKGNHQLLH*QQVTIP Trigger: GGGGATGGTTACTTGCTGCAAGTGCAGGAGCTGGTG...GTTCCCCTTCCGCCATGATTGTAAGTTTCCTGAGGCCTCCCCCGCCATGTGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000321424.7 ENST00000430817.5 |
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| CDS-3UTR CAA 90 bp | GTAGAAGCTAGAGGCAGGGATGGGTCCCTGGTAGCCGGGGAAAGGGGAGACATTGGCTTCTTCAGGGGGTaGCCATCTTTCCAGGATTCA | + |
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Preference number: 5 (lower is better) Translates to: VEARGRDGSLVAGERGDIGFFRG*PSFQDS Trigger: TGAATCCTGGAAAGATGGCAACCCCCTGAAGAAGCC...AATGTCTCCCCTTTCCCCGGCTACCAGGGACCCATCCCTGCCTCTAGCTTCTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| CDS-3UTR CAA 90 bp | TCCACATGGCGGGGGAGGCCTCAGGAAACTTACAATCATGGCGGAAGGGGAACCGGCTTCTTCAGGGGGTaGCCATCTTTCCAGGATTCA | + |
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Preference number: 5 (lower is better) Translates to: STWRGRPQETYNHGGRGTGFFRG*PSFQDS Trigger: TGAATCCTGGAAAGATGGCAACCCCCTGAAGAAGCC...GGTTCCCCTTCCGCCATGATTGTAAGTTTCCTGAGGCCTCCCCCGCCATGTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000321424.7 ENST00000430817.5 |
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| CDS-3UTR CAA 90 bp | ACAGTTCCACATGGCGGGGGAGGCCTCAGGAAACTTACAATCATGGCGGAAGGGCTTGTGATACAGGTCTaGAGGTGCCTGTGCCCTCAT | + |
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Preference number: 5 (lower is better) Translates to: TVPHGGGGLRKLTIMAEGLVIQV*RCLCPH Trigger: ATGAGGGCACAGGCACCTCAAGACCTGTATCACAAG...CCCTTCCGCCATGATTGTAAGTTTCCTGAGGCCTCCCCCGCCATGTGGAACTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000321424.7 ENST00000430817.5 |
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| CDS-3UTR CAA 90 bp | AGTTCCACATGGCGGGGGAGGCCTCAGGAAACTTACAATCATGGCGGAAGGGGAGGCTCTAGAGGGTTCTaGTTCTATGAGAATCAGCCT | + |
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Preference number: 5 (lower is better) Translates to: SSTWRGRPQETYNHGGRGGSRGF*FYENQP Trigger: AGGCTGATTCTCATAGAACAAGAACCCTCTAGAGCC...TCCCCTTCCGCCATGATTGTAAGTTTCCTGAGGCCTCCCCCGCCATGTGGAACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000321424.7 ENST00000430817.5 |
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| CDS CCA 90 bp | TTGGTTAGACAGGAGGAGGGAGCCCTGGTGACCTACTGCATAGCATaGGGCTCTAGAGGGTTCTTGTTCTATGAGAATCAGCCTCTGACT | + |
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Preference number: 5 (lower is better) Translates to: LVRQEEGALVTYCIA*GSRGFLFYENQPLT Trigger: AGTCAGAGGCTGATTCTCATAGAACAAGAACCCTCTAGAGCCCCATGCTATGCAGTAGGTCACCAGGGCTCCCTCCTCCTGTCTAACCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| CDS-3UTR CAA 90 bp | ATAAATGAAAGAGGTGTAATTGACTCACAGTTCCACATGGCGGGGGAGGCCTCACACCAGCTCCTGCACTaGCAGCAAGTAACCATCCCC | + |
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Preference number: 5 (lower is better) Translates to: INERGVIDSQFHMAGEASHQLLH*QQVTIP Trigger: GGGGATGGTTACTTGCTGCAAGTGCAGGAGCTGGTG...TGAGGCCTCCCCCGCCATGTGGAACTGTGAGTCAATTACACCTCTTTCATTTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000321424.7 ENST00000430817.5 |
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| CDS GCA 90 bp | GTCCAAGTTTTGGTTAGACAGGAGGAGGGAGCCCTGGTGACCTACTaGATAGCATGGGGCTCTAGAGGGTTCTTGTTCTATGAGAATCAG | + |
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Preference number: 5 (lower is better) Translates to: VQVLVRQEEGALVTY*IAWGSRGFLFYENQ Trigger: CTGATTCTCATAGAACAAGAACCCTCTAGAGCCCCATGCTATGCAGTAGGTCACCAGGGCTCCCTCCTCCTGTCTAACCAAAACTTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| CDS GCA 90 bp | GCCTCAGGAAACTTACAATCATGGCGGAAGGGGAACCAGGCACATTaGATAGCATGGGGCTCTAGAGGGTTCTTGTTCTATGAGAATCAG | + |
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Preference number: 5 (lower is better) Translates to: ASGNLQSWRKGNQAH*IAWGSRGFLFYENQ Trigger: CTGATTCTCATAGAACAAGAACCCTCTAGAGCCCCATGCTATGCAATGTGCCTGGTTCCCCTTCCGCCATGATTGTAAGTTTCCTGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000430817.5 |
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| CDS-3UTR CAA 90 bp | ATAAATGAAAGAGGTGTAATTGACTCACAGTTCCACATGGCGGGGGAGGCCTCACTTGTGATACAGGTCTaGAGGTGCCTGTGCCCTCAT | + |
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Preference number: 5 (lower is better) Translates to: INERGVIDSQFHMAGEASLVIQV*RCLCPH Trigger: ATGAGGGCACAGGCACCTCAAGACCTGTATCACAAG...TGAGGCCTCCCCCGCCATGTGGAACTGTGAGTCAATTACACCTCTTTCATTTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000321424.7 ENST00000430817.5 |
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| CDS-3UTR CAA 90 bp | GAAACTTACAATCATGGCGGAAGGGGAACCAGGCACATCTTACATGGTGGCAGGACATTGGTCCAAGTTTaGGTTAGACAGGAGGAGGGA | + |
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Preference number: 5 (lower is better) Translates to: ETYNHGGRGTRHILHGGRTLVQV*VRQEEG Trigger: TCCCTCCTCCTGTCTAACCAAAACTTGGACCAATGT...CCTGCCACCATGTAAGATGTGCCTGGTTCCCCTTCCGCCATGATTGTAAGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000321424.7 |
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| CDS CCA 90 bp | AACTTACAATCATGGCGGAAGGGGAACCAGGCACATTGCATAGCATaGGGCTCTAGAGGGTTCTTGTTCTATGAGAATCAGCCTCTGACT | + |
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Preference number: 5 (lower is better) Translates to: NLQSWRKGNQAHCIA*GSRGFLFYENQPLT Trigger: AGTCAGAGGCTGATTCTCATAGAACAAGAACCCTCTAGAGCCCCATGCTATGCAATGTGCCTGGTTCCCCTTCCGCCATGATTGTAAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430817.5 |
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| CDS-3UTR CAA 90 bp | TGGCAACACTCATGGCATGGCACATGTAAGAGCTGCGTGATTCAACTGAAAAGCGGCTCTAGAGGGTTCTaGTTCTATGAGAATCAGCCT | + |
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Preference number: 5 (lower is better) Translates to: WQHSWHGTCKSCVIQLKSGSRGF*FYENQP Trigger: AGGCTGATTCTCATAGAACAAGAACCCTCTAGAGCC...GCTTTTCAGTTGAATCACGCAGCTCTTACATGTGCCATGCCATGAGTGTTGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430817.5 |
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