RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SIGLEC6 (Homo sapiens)

Ensembl gene IDs: ENSG00000105492

Ensembl transcript IDs: ENST00000343300.8, ENST00000346477.7, ENST00000359982.8, ENST00000391797.3, ENST00000425629.8, ENST00000436458.5, ENST00000474054.1, ENST00000489837.1

Found 294 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGTGGAAATGGACATGGGGTATTGGTGACTGGTGAGGAATTGATCTaGGGAAATCTGGATGGACAAGATCATGTAGAGAGCCTTGAGCAG +
Preference number: 1 (lower is better)
Translates to: CGNGHGVLVTGEELI*GNLDGQDHVESLEQ
Trigger: CTGCTCAAGGCTCTCTACATGATCTTGTCCATCCAGATTTCCCCAGATCAATTCCTCACCAGTCACCAATACCCCATGTCCATTTCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425629.8
3UTR TCA 90 bp TGTAAGAGGAAGCTGTGGAAATGGACATGGGGTATTGGTGACTGGTaGGGAATTGATCTGGGGAAATCTGGATGGACAAGATCATGTAGA +
Preference number: 1 (lower is better)
Translates to: CKRKLWKWTWGIGDW*GIDLGKSGWTRSCR
Trigger: TCTACATGATCTTGTCCATCCAGATTTCCCCAGATCAATTCCTCACCAGTCACCAATACCCCATGTCCATTTCCACAGCTTCCTCTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425629.8
3UTR TCA 90 bp AAGGTTATGGCTTTGGACAATTCCTCACTTGTGTATCTTGATTTCTaGGTACTCAGTGTCGGTGACCTTTGGTTCCTGAGGTTGCACCTT +
Preference number: 1 (lower is better)
Translates to: KVMALDNSSLVYLDF*VLSVGDLWFLRLHL
Trigger: AAGGTGCAACCTCAGGAACCAAAGGTCACCGACACTGAGTACTCAGAAATCAAGATACACAAGTGAGGAATTGTCCAAAGCCATAACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
3UTR CCA 90 bp GTTAGCTGTATGCTTTCTTTGACCTTTCACAATAATCTGGTTAGATaGAAATTATTTCCCTGCCTTACAGAGCAGGGACATAAAGCGACT +
Preference number: 1 (lower is better)
Translates to: VSCMLSLTFHNNLVR*KLFPCLTEQGHKAT
Trigger: AGTCGCTTTATGTCCCTGCTCTGTAAGGCAGGGAAATAATTTCCATCTAACCAGATTATTGTGAAAGGTCAAAGAAAGCATACAGCTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425629.8
3UTR-3UTR TCA 90 bp ATCTACAAGCCAACAAGAGAGGCCTTAGAAGGGACCAACCCTGATAACACCTTGGTGACCTTTGGTTCCTaGGGTTGCACCTTGTGGAAG +
Preference number: 2 (lower is better)
Translates to: IYKPTREALEGTNPDNTLVTFGS*GCTLWK
Trigger: CTTCCACAAGGTGCAACCTCAGGAACCAAAGGTCAC...CAAGGTGTTATCAGGGTTGGTCCCTTCTAAGGCCTCTCTTGTTGGCTTGTAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343300.8
ENST00000359982.8
3UTR-3UTR TCA 90 bp ATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTCTCCAAGTACTCAGTGTCGGTaGCCTTTGGTTCCTGAGGTT +
Preference number: 2 (lower is better)
Translates to: IAVAALVTNTLRGTMFSPSTQCR*PLVPEV
Trigger: AACCTCAGGAACCAAAGGTCACCGACACTGAGTACT...TGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
3UTR-3UTR TCA 90 bp AGTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTATGGCTTTCTCCTGCTCATCTTCTaGGATGGGGCCAGCCTCAGC +
Preference number: 2 (lower is better)
Translates to: SNQYTERYHVLSNQGYGFLLLIF*DGASLS
Trigger: GCTGAGGCTGGCCCCATCTCAGAAGATGAGCAGGAG...AAAGCCATAACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359982.8
3UTR-3UTR TCA 90 bp AAGATTAGGACACAAACACACTCAGAGGAAAGACCATGTGAAGACACAAGGAGGGTGACCTTTGGTTCCTaGGGTTGCACCTTGTGGAAG +
Preference number: 2 (lower is better)
Translates to: KIRTQTHSEERPCEDTRRVTFGS*GCTLWK
Trigger: CTTCCACAAGGTGCAACCTCAGGAACCAAAGGTCAC...CCTCCTTGTGTCTTCACATGGTCTTTCCTCTGAGTGTGTTTGTGTCCTAATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343300.8
ENST00000359982.8
3UTR-3UTR TCA 90 bp ACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTATGGCTTTGGACGTGACCTTTGGTTCCTaGGGTTGCACCTTGTGGAAG +
Preference number: 2 (lower is better)
Translates to: TNTLRGTMFSPIKVMALDVTFGS*GCTLWK
Trigger: CTTCCACAAGGTGCAACCTCAGGAACCAAAGGTCAC...GTCCAAAGCCATAACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
3UTR-3UTR CCA 90 bp GCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTAGTGTCGGTGACCTTTaGTTCCTGAGGTTGCACCTT +
Preference number: 2 (lower is better)
Translates to: AALVTNTLRGTMFSPIKVSVGDL*FLRLHL
Trigger: AAGGTGCAACCTCAGGAACCAAAGGTCACCGACACT...AACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
3UTR CAA 90 bp AGACTGGGATTTGTAAGAGGAAGCTGTGGAAATGGACATGGGGTATaGGTGACTGGTGAGGAATTGATCTGGGGAAATCTGGATGGACAA +
Preference number: 2 (lower is better)
Translates to: RLGFVRGSCGNGHGV*VTGEELIWGNLDGQ
Trigger: TTGTCCATCCAGATTTCCCCAGATCAATTCCTCACCAGTCACCAATACCCCATGTCCATTTCCACAGCTTCCTCTTACAAATCCCAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425629.8
3UTR-3UTR CCA 90 bp ACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTATGGCTTTGGACAGTGTCGGTGACCTTTaGTTCCTGAGGTTGCACCTT +
Preference number: 2 (lower is better)
Translates to: TNTLRGTMFSPIKVMALDSVGDL*FLRLHL
Trigger: AAGGTGCAACCTCAGGAACCAAAGGTCACCGACACT...GTCCAAAGCCATAACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
3UTR-3UTR TCA 90 bp GCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTGTGTATCTTGATTTCTaGGTACTCAGTGTCGGTGAC +
Preference number: 2 (lower is better)
Translates to: AALVTNTLRGTMFSPIKVVYLDF*VLSVGD
Trigger: GTCACCGACACTGAGTACTCAGAAATCAAGATACAC...AACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
3UTR-3UTR TCA 90 bp TCTCCAATCAAGGTTATGGCTTTGGACAATTCCTCACTTGTGTATCTTGATTTCAGTACTCAGTGTCGGTaGCCTTTGGTTCCTGAGGTT +
Preference number: 2 (lower is better)
Translates to: SPIKVMALDNSSLVYLDFSTQCR*PLVPEV
Trigger: AACCTCAGGAACCAAAGGTCACCGACACTGAGTACT...GAAATCAAGATACACAAGTGAGGAATTGTCCAAAGCCATAACCTTGATTGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
3UTR-3UTR CCA 90 bp CAATCAAGGTTATGGCTTTGGACAATTCCTCACTTGTGTATCTTGATTTCTGAGAGTGTCGGTGACCTTTaGTTCCTGAGGTTGCACCTT +
Preference number: 2 (lower is better)
Translates to: QSRLWLWTIPHLCILISESVGDL*FLRLHL
Trigger: AAGGTGCAACCTCAGGAACCAAAGGTCACCGACACT...CTCAGAAATCAAGATACACAAGTGAGGAATTGTCCAAAGCCATAACCTTGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
3UTR-3UTR CCA 90 bp TTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATTCAAGGTTATGGCTTTaGACAATTCCTCACTTGTGT +
Preference number: 2 (lower is better)
Translates to: FVVHCCGSPSNQYTERYHSRLWL*TIPHLC
Trigger: ACACAAGTGAGGAATTGTCCAAAGCCATAACCTTGA...ATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343300.8
ENST00000359982.8
3UTR CCA 72 bp GGACATGGGGTATTGGTGACTGGTGAGGAATTGATCTaGGGAAATCTGGATGGACAAGATCATGTAGAGAGC +
Preference number: 3 (lower is better)
Translates to: GHGVLVTGEELI*GNLDGQDHVES
Trigger: GCTCTCTACATGATCTTGTCCATCCAGATTTCCCCAGATCAATTCCTCACCAGTCACCAATACCCCATGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425629.8
3UTR TCA 72 bp AAGCTGTGGAAATGGACATGGGGTATTGGTGACTGGTaGGGAATTGATCTGGGGAAATCTGGATGGACAAGA +
Preference number: 3 (lower is better)
Translates to: KLWKWTWGIGDW*GIDLGKSGWTR
Trigger: TCTTGTCCATCCAGATTTCCCCAGATCAATTCCTCACCAGTCACCAATACCCCATGTCCATTTCCACAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425629.8
3UTR TCA 72 bp GCTTTGGACAATTCCTCACTTGTGTATCTTGATTTCTaGGTACTCAGTGTCGGTGACCTTTGGTTCCTGAGG +
Preference number: 3 (lower is better)
Translates to: ALDNSSLVYLDF*VLSVGDLWFLR
Trigger: CCTCAGGAACCAAAGGTCACCGACACTGAGTACTCAGAAATCAAGATACACAAGTGAGGAATTGTCCAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
3UTR GCA 72 bp AAGTTCTGTGTTTATGTCACTCGGTTTGTGGTACATTaGTGTGGCAGCCCTAGTAACCAATACACTGAGAGG +
Preference number: 3 (lower is better)
Translates to: KFCVYVTRFVVH*CGSPSNQYTER
Trigger: CCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGACATAAACACAGAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
3UTR CCA 72 bp GAGGTACCATGTTCTCTCCAATCAAGGTTATGGCTTTaGACAATTCCTCACTTGTGTATCTTGATTTCTGAG +
Preference number: 3 (lower is better)
Translates to: EVPCSLQSRLWL*TIPHLCILISE
Trigger: CTCAGAAATCAAGATACACAAGTGAGGAATTGTCCAAAGCCATAACCTTGATTGGAGAGAACATGGTACCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
3UTR GCA 72 bp TTGAACTCAGTTCTCTTGGACAGAAGTCCTGTGGTCTaGCATATATACGAAGGTATTTATATAGTCCATTTA +
Preference number: 3 (lower is better)
Translates to: LNSVLLDRSPVV*HIYEGIYIVHL
Trigger: TAAATGGACTATATAAATACCTTCGTATATATGGCAGACCACAGGACTTCTGTCCAAGAGAACTGAGTTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346477.7
ENST00000425629.8
CDS-3UTR TCA 90 bp CCTTGTGGAAGTGTAGGACAGCGTAGTGGAGCTCCTGCTCATCTTCTGAGATGGTGGAATCTCCGCTCCTaGGCCAGGGCCCCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: PCGSVGQRSGAPAHLLRWWNLRS*ARAPAH
Trigger: GTGGGCAGGGGCCCTGGCTCAGGAGCGGAGATTCCA...CCATCTCAGAAGATGAGCAGGAGCTCCACTACGCTGTCCTACACTTCCACAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR GCA 90 bp GTTCCTGAGGTTGCACCTTGTGGAAGTGTAGGACAGCGTAGTGGAGCTCCTGCTGTGGAGGGGAAGGACTaGGGGGAGGAACGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: VPEVAPCGSVGQRSGAPAVEGKD*GEERVA
Trigger: AGCCACCCGTTCCTCCCCGCAGTCCTTCCCCTCCAC...AGCAGGAGCTCCACTACGCTGTCCTACACTTCCACAAGGTGCAACCTCAGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR GCA 90 bp GGAAGTGTAGGACAGCGTAGTGGAGCTCCTGCTCATCTTCTGAGATGGGGCCAGCCCCGGGTCTCCTCCTaGACTTCTTCGTCTGGGTCG +
Preference number: 4 (lower is better)
Translates to: GSVGQRSGAPAHLLRWGQPRVSS*TSSSGS
Trigger: CGACCCAGACGAAGAAGTGCAGGAGGAGACCCGGGG...CTGGCCCCATCTCAGAAGATGAGCAGGAGCTCCACTACGCTGTCCTACACTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR GCA 90 bp ACAAGAGAGGCCTTAGAAGGGACCAACCCTGATAACACCTTGTTCTCAGACCTCCTGAGCCAGGGCCCCTaGCCACAGCAGGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TREALEGTNPDNTLFSDLLSQGP*PQQGQQ
Trigger: CTGCTGCCCCTGCTGTGGGCAGGGGCCCTGGCTCAG...GAGGTCTGAGAACAAGGTGTTATCAGGGTTGGTCCCTTCTAAGGCCTCTCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
CDS-3UTR CCA 90 bp CCTTGTGGAAGTGTAGGACAGCGTAGTGGAGCTCCTGCTCATCTTCTGAGATGGGGAGGAACGGGTGGCTaGGGAGGAGCGCGTGATCTC +
Preference number: 4 (lower is better)
Translates to: PCGSVGQRSGAPAHLLRWGGTGG*GGARDL
Trigger: GAGATCACGCGCTCCTCCCCAGCCACCCGTTCCTCC...CCATCTCAGAAGATGAGCAGGAGCTCCACTACGCTGTCCTACACTTCCACAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR TCA 90 bp GTTCCTGAGGTTGCACCTTGTGGAAGTGTAGGACAGCGTAGTGGAGCTCCTGCTCTGGGGAGGAGCGCGTaGTCTCGGCTGTTCACAGAA +
Preference number: 4 (lower is better)
Translates to: VPEVAPCGSVGQRSGAPALGRSA*SRLFTE
Trigger: TTCTGTGAACAGCCGAGATCACGCGCTCCTCCCCAG...AGCAGGAGCTCCACTACGCTGTCCTACACTTCCACAAGGTGCAACCTCAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR TCA 90 bp CGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACTGGAATCTCCGCTCCTaGGCCAGGGCCCCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: RFVVHCCGSPSNQYTERYWNLRS*ARAPAH
Trigger: GTGGGCAGGGGCCCTGGCTCAGGAGCGGAGATTCCA...GTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
CDS-3UTR TCA 90 bp GAGGTTGCACCTTGTGGAAGTGTAGGACAGCGTAGTGGAGCTCCTGCTCATCTTTCTGCAGACCCTACTTaGGGCAGCTCCAGGACCCCG +
Preference number: 4 (lower is better)
Translates to: EVAPCGSVGQRSGAPAHLSADPT*GSSRTP
Trigger: CGGGGTCCTGGAGCTGCCTCAAGTAGGGTCTGCAGA...AAGATGAGCAGGAGCTCCACTACGCTGTCCTACACTTCCACAAGGTGCAACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR GCA 90 bp GTTGCACCTTGTGGAAGTGTAGGACAGCGTAGTGGAGCTCCTGCTCATCTTCTGCCCCGGGTCTCCTCCTaGACTTCTTCGTCTGGGTCG +
Preference number: 4 (lower is better)
Translates to: VAPCGSVGQRSGAPAHLLPRVSS*TSSSGS
Trigger: CGACCCAGACGAAGAAGTGCAGGAGGAGACCCGGGG...CAGAAGATGAGCAGGAGCTCCACTACGCTGTCCTACACTTCCACAAGGTGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR GCA 90 bp CACAAGGAGGAGACAGCCATCTACAAGCCAACAAGAGAGGCCTTAGAAGGGACCCCCCGGGTCTCCTCCTaGACTTCTTCGTCTGGGTCG +
Preference number: 4 (lower is better)
Translates to: HKEETAIYKPTREALEGTPRVSS*TSSSGS
Trigger: CGACCCAGACGAAGAAGTGCAGGAGGAGACCCGGGG...GGTCCCTTCTAAGGCCTCTCTTGTTGGCTTGTAGATGGCTGTCTCCTCCTTGTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR GCA 90 bp GAGGTTGCACCTTGTGGAAGTGTAGGACAGCGTAGTGGAGCTCCTGCTCATCTTGCTAGCTCCCCAGACTaGTCCCAGGACACCACCAGC +
Preference number: 4 (lower is better)
Translates to: EVAPCGSVGQRSGAPAHLASSPD*SQDTTS
Trigger: GCTGGTGGTGTCCTGGGAGCAGTCTGGGGAGCTAGC...AAGATGAGCAGGAGCTCCACTACGCTGTCCTACACTTCCACAAGGTGCAACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359982.8
CDS-3UTR CCA 90 bp GGAAGTGTAGGACAGCGTAGTGGAGCTCCTGCTCATCTTCTGAGATGGGGCCAGCGTCTGGGTCGTTTGTaGCCACTGGAACATCAGCCC +
Preference number: 4 (lower is better)
Translates to: GSVGQRSGAPAHLLRWGQRLGRL*PLEHQP
Trigger: GGGCTGATGTTCCAGTGGCCACAAACGACCCAGACG...CTGGCCCCATCTCAGAAGATGAGCAGGAGCTCCACTACGCTGTCCTACACTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR CCA 90 bp GGAGGAGACAGCCATCTACAAGCCAACAAGAGAGGCCTTAGAAGGGACCAACCCGTGGAGCATCTGGGGTaGAAAGAGGTGGCCGCCTCA +
Preference number: 4 (lower is better)
Translates to: GGDSHLQANKRGLRRDQPVEHLG*KEVAAS
Trigger: TGAGGCGGCCACCTCTTTCCACCCCAGATGCTCCAC...GGGTTGGTCCCTTCTAAGGCCTCTCTTGTTGGCTTGTAGATGGCTGTCTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359982.8
CDS-3UTR TCA 90 bp AAGCCAACAAGAGAGGCCTTAGAAGGGACCAACCCTGATAACACCTTGTTCTCATGGAATCTCCGCTCCTaGGCCAGGGCCCCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: KPTREALEGTNPDNTLFSWNLRS*ARAPAH
Trigger: GTGGGCAGGGGCCCTGGCTCAGGAGCGGAGATTCCA...TGAGAACAAGGTGTTATCAGGGTTGGTCCCTTCTAAGGCCTCTCTTGTTGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
CDS-3UTR GCA 90 bp TTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATCTGAGCCAGGGCCCCTaGCCACAGCAGGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: FVVHCCGSPSNQYTERYHLSQGP*PQQGQQ
Trigger: CTGCTGCCCCTGCTGTGGGCAGGGGCCCTGGCTCAG...ATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
CDS-3UTR CCA 90 bp CCTTGTGGAAGTGTAGGACAGCGTAGTGGAGCTCCTGCTCATCTTCTGAGATGGGAGATGTTGGGCCTGTaGGTCAGGGCCATCACACGC +
Preference number: 4 (lower is better)
Translates to: PCGSVGQRSGAPAHLLRWEMLGL*VRAITR
Trigger: GCGTGTGATGGCCCTGACCCACAGGCCCAACATCTC...CCATCTCAGAAGATGAGCAGGAGCTCCACTACGCTGTCCTACACTTCCACAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343300.8
ENST00000359982.8
CDS-3UTR GCA 90 bp GTTCCTGAGGTTGCACCTTGTGGAAGTGTAGGACAGCGTAGTGGAGCTCCTGCTTCACAGAAGAGGAACTaGGAAGCCACAAGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: VPEVAPCGSVGQRSGAPASQKRN*EATSPR
Trigger: CCGAGGGCTTGTGGCTTCGCAGTTCCTCTTCTGTGA...AGCAGGAGCTCCACTACGCTGTCCTACACTTCCACAAGGTGCAACCTCAGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR GCA 90 bp AAGACACAAGGAGGAGACAGCCATCTACAAGCCAACAAGAGAGGCCTTAGAAGGCCCCGGGTCTCCTCCTaGACTTCTTCGTCTGGGTCG +
Preference number: 4 (lower is better)
Translates to: KTQGGDSHLQANKRGLRRPRVSS*TSSSGS
Trigger: CGACCCAGACGAAGAAGTGCAGGAGGAGACCCGGGG...CCTTCTAAGGCCTCTCTTGTTGGCTTGTAGATGGCTGTCTCCTCCTTGTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp TTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATGGGAGGAACGGGTGGCTaGGGAGGAGCGCGTGATCTC +
Preference number: 4 (lower is better)
Translates to: LWYIAVAALVTNTLRGTMGGTGG*GGARDL
Trigger: GAGATCACGCGCTCCTCCCCAGCCACCCGTTCCTCC...CATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000436458.5
CDS-3UTR CCA 90 bp ACAAGAGAGGCCTTAGAAGGGACCAACCCTGATAACACCTTGTTCTCAGACCTCGAGGCGGAGGCTTCCTaGGCTCCCTGCATGAGCAGA +
Preference number: 4 (lower is better)
Translates to: TREALEGTNPDNTLFSDLEAEAS*APCMSR
Trigger: TCTGCTCATGCAGGGAGCCCAGGAAGCCTCCGCCTC...GAGGTCTGAGAACAAGGTGTTATCAGGGTTGGTCCCTTCTAAGGCCTCTCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp GTTGCACCTTGTGGAAGTGTAGGACAGCGTAGTGGAGCTCCTGCTCATCTTCTGCGTCTGGGTCGTTTGTaGCCACTGGAACATCAGCCC +
Preference number: 4 (lower is better)
Translates to: VAPCGSVGQRSGAPAHLLRLGRL*PLEHQP
Trigger: GGGCTGATGTTCCAGTGGCCACAAACGACCCAGACG...CAGAAGATGAGCAGGAGCTCCACTACGCTGTCCTACACTTCCACAAGGTGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR TCA 90 bp GTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTCTCTGCAGACCCTACTTaGGGCAGCTCCAGGACCCCG +
Preference number: 4 (lower is better)
Translates to: VHCCGSPSNQYTERYHVLSADPT*GSSRTP
Trigger: CGGGGTCCTGGAGCTGCCTCAAGTAGGGTCTGCAGA...GAGAACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR TCA 90 bp ATGTCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGTCTGCAGACCCTACTTaGGGCAGCTCCAGGACCCCG +
Preference number: 4 (lower is better)
Translates to: MSLGLWYIAVAALVTNTLSADPT*GSSRTP
Trigger: CGGGGTCCTGGAGCTGCCTCAAGTAGGGTCTGCAGA...CAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR GCA 90 bp AGGTACCATGTTCTCTCCAATCAAGGTTATGGCTTTGGACAATTCCTCACTTGTCTGAGCCAGGGCCCCTaGCCACAGCAGGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RYHVLSNQGYGFGQFLTCLSQGP*PQQGQQ
Trigger: CTGCTGCCCCTGCTGTGGGCAGGGGCCCTGGCTCAG...ACAAGTGAGGAATTGTCCAAAGCCATAACCTTGATTGGAGAGAACATGGTACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR GCA 90 bp TTAGATGGAAATTATTTCCCTGCCTTACAGAGCAGGGACATAAAGCGACTTGCTCTGAGCCAGGGCCCCTaGCCACAGCAGGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LDGNYFPALQSRDIKRLALSQGP*PQQGQQ
Trigger: CTGCTGCCCCTGCTGTGGGCAGGGGCCCTGGCTCAG...AGCAAGTCGCTTTATGTCCCTGCTCTGTAAGGCAGGGAAATAATTTCCATCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS-3UTR GCA 90 bp GTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTCCCCCGGGTCTCCTCCTaGACTTCTTCGTCTGGGTCG +
Preference number: 4 (lower is better)
Translates to: VHCCGSPSNQYTERYHVLPRVSS*TSSSGS
Trigger: CGACCCAGACGAAGAAGTGCAGGAGGAGACCCGGGG...GAGAACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR GCA 90 bp TCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGCTAGCTCCCCAGACTaGTCCCAGGACACCACCAGC +
Preference number: 4 (lower is better)
Translates to: SLGLWYIAVAALVTNTLRASSPD*SQDTTS
Trigger: GCTGGTGGTGTCCTGGGAGCAGTCTGGGGAGCTAGC...TCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR GCA 90 bp GTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGCTAGCTCCCCAGACTaGTCCCAGGACACCACCAGC +
Preference number: 4 (lower is better)
Translates to: VAALVTNTLRGTMFSPIKASSPD*SQDTTS
Trigger: GCTGGTGGTGTCCTGGGAGCAGTCTGGGGAGCTAGC...CTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp ACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGGAGATGTTGGGCCTGTaGGTCAGGGCCATCACACGC +
Preference number: 4 (lower is better)
Translates to: TRFVVHCCGSPSNQYTEREMLGL*VRAITR
Trigger: GCGTGTGATGGCCCTGACCCACAGGCCCAACATCTC...CCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR TCA 90 bp GTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTCCTGGGGAGGAGCGCGTaGTCTCGGCTGTTCACAGAA +
Preference number: 4 (lower is better)
Translates to: VHCCGSPSNQYTERYHVLLGRSA*SRLFTE
Trigger: TTCTGTGAACAGCCGAGATCACGCGCTCCTCCCCAG...GAGAACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000436458.5
CDS-3UTR TCA 90 bp AGAAGATTAGGACACAAACACACTCAGAGGAAAGACCATGTGAAGACACAAGGATGGAATCTCCGCTCCTaGGCCAGGGCCCCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: RRLGHKHTQRKDHVKTQGWNLRS*ARAPAH
Trigger: GTGGGCAGGGGCCCTGGCTCAGGAGCGGAGATTCCA...TCCTTGTGTCTTCACATGGTCTTTCCTCTGAGTGTGTTTGTGTCCTAATCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
CDS-3UTR TCA 90 bp GTGTTTATGTCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATTCTGCAGACCCTACTTaGGGCAGCTCCAGGACCCCG +
Preference number: 4 (lower is better)
Translates to: VFMSLGLWYIAVAALVTNSADPT*GSSRTP
Trigger: CGGGGTCCTGGAGCTGCCTCAAGTAGGGTCTGCAGA...ATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGACATAAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR TCA 90 bp CACAAGGAGGAGACAGCCATCTACAAGCCAACAAGAGAGGCCTTAGAAGGGACCCTCAGCAGGGTGGTCTaGAACTATGCCTGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: HKEETAIYKPTREALEGTLSRVV*NYACLE
Trigger: TTCCAGACAGGCATAGTTTCAGACCACCCTGCTGAG...GGTCCCTTCTAAGGCCTCTCTTGTTGGCTTGTAGATGGCTGTCTCCTCCTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR TCA 90 bp TGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATCTCCTGCTCATCTTCTaGGATGGGGCCAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: CCGSPSNQYTERYHVLSNLLLIF*DGASLS
Trigger: GCTGAGGCTGGCCCCATCTCAGAAGATGAGCAGGAG...ATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000391797.3
ENST00000425629.8
ENST00000436458.5
CDS-3UTR TCA 90 bp ATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTCTCCACTCCTGCTCATCTTCTaGGATGGGGCCAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: IAVAALVTNTLRGTMFSPLLLIF*DGASLS
Trigger: GCTGAGGCTGGCCCCATCTCAGAAGATGAGCAGGAG...TGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000391797.3
ENST00000425629.8
ENST00000436458.5
CDS-3UTR TCA 90 bp AAGACACAAGGAGGAGACAGCCATCTACAAGCCAACAAGAGAGGCCTTAGAAGGTGGAGCCTGAGACCATaGCGGGGTTCACATCATCCG +
Preference number: 4 (lower is better)
Translates to: KTQGGDSHLQANKRGLRRWSLRP*RGSHHP
Trigger: CGGATGATGTGAACCCCGTCATGGTCTCAGGCTCCA...CCTTCTAAGGCCTCTCTTGTTGGCTTGTAGATGGCTGTCTCCTCCTTGTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346477.7
ENST00000425629.8
ENST00000436458.5
CDS-3UTR TCA 90 bp ATCTACAAGCCAACAAGAGAGGCCTTAGAAGGGACCAACCCTGATAACACCTTGATGACCCCTGGAGCCTaGGACCATGACGGGGTTCAC +
Preference number: 4 (lower is better)
Translates to: IYKPTREALEGTNPDNTLMTPGA*DHDGVH
Trigger: GTGAACCCCGTCATGGTCTCAGGCTCCAGGGGTCAT...CAAGGTGTTATCAGGGTTGGTCCCTTCTAAGGCCTCTCTTGTTGGCTTGTAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346477.7
ENST00000425629.8
ENST00000436458.5
CDS-3UTR GCA 90 bp AGTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTATGGCTTTCTGAGCCAGGGCCCCTaGCCACAGCAGGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SNQYTERYHVLSNQGYGFLSQGP*PQQGQQ
Trigger: CTGCTGCCCCTGCTGTGGGCAGGGGCCCTGGCTCAG...AAAGCCATAACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000391797.3
ENST00000425629.8
CDS-3UTR GCA 90 bp AAGCCAACAAGAGAGGCCTTAGAAGGGACCAACCCTGATAACACCTTGTTCTCAGACACAGACACCTGGTaGTGTGGCCTCTGGGCCTAC +
Preference number: 4 (lower is better)
Translates to: KPTREALEGTNPDNTLFSDTDTW*CGLWAY
Trigger: GTAGGCCCAGAGGCCACAGCACCAGGTGTCTGTGTC...TGAGAACAAGGTGTTATCAGGGTTGGTCCCTTCTAAGGCCTCTCTTGTTGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS-3UTR CCA 90 bp AAGACACAAGGAGGAGACAGCCATCTACAAGCCAACAAGAGAGGCCTTAGAAGGGCTCATCTTCTGAGATaGGGCCAGCCTCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: KTQGGDSHLQANKRGLRRAHLLR*GQPQQG
Trigger: ACCCTGCTGAGGCTGGCCCCATCTCAGAAGATGAGC...CCTTCTAAGGCCTCTCTTGTTGGCTTGTAGATGGCTGTCTCCTCCTTGTGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp CGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACGCTCATCTTCTGAGATaGGGCCAGCCTCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: RFVVHCCGSPSNQYTERYAHLLR*GQPQQG
Trigger: ACCCTGCTGAGGCTGGCCCCATCTCAGAAGATGAGC...GTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp CGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACTGGGGTGGAAAGAGGTaGCCGCCTCAACATCCAGGA +
Preference number: 4 (lower is better)
Translates to: RFVVHCCGSPSNQYTERYWGGKR*PPQHPG
Trigger: TCCTGGATGTTGAGGCGGCCACCTCTTTCCACCCCA...GTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359982.8
CDS-3UTR TCA 90 bp TTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATCTGGGGAGGAGCGCGTaGTCTCGGCTGTTCACAGAA +
Preference number: 4 (lower is better)
Translates to: FVVHCCGSPSNQYTERYHLGRSA*SRLFTE
Trigger: TTCTGTGAACAGCCGAGATCACGCGCTCCTCCCCAG...ATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000436458.5
CDS-3UTR TCA 90 bp AAGAGAAGATTAGGACACAAACACACTCAGAGGAAAGACCATGTGAAGACACAATGGAATCTCCGCTCCTaGGCCAGGGCCCCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: KRRLGHKHTQRKDHVKTQWNLRS*ARAPAH
Trigger: GTGGGCAGGGGCCCTGGCTCAGGAGCGGAGATTCCA...TTGTGTCTTCACATGGTCTTTCCTCTGAGTGTGTTTGTGTCCTAATCTTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
CDS-3UTR TCA 90 bp TATGTCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTCTCCTGCTCATCTTCTaGGATGGGGCCAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: YVTRFVVHCCGSPSNQYTLLLIF*DGASLS
Trigger: GCTGAGGCTGGCCCCATCTCAGAAGATGAGCAGGAG...AGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGACATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR TCA 90 bp CACAAGGAGGAGACAGCCATCTACAAGCCAACAAGAGAGGCCTTAGAAGGGACCAGTACTCAGTGTCGGTaGCCTTTGGTTCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: HKEETAIYKPTREALEGTSTQCR*PLVPEV
Trigger: AACCTCAGGAACCAAAGGTCACCGACACTGAGTACT...GGTCCCTTCTAAGGCCTCTCTTGTTGGCTTGTAGATGGCTGTCTCCTCCTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR TCA 90 bp GCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTATGACCCCTGGAGCCTaGGACCATGACGGGGTTCAC +
Preference number: 4 (lower is better)
Translates to: AALVTNTLRGTMFSPIKVMTPGA*DHDGVH
Trigger: GTGAACCCCGTCATGGTCTCAGGCTCCAGGGGTCAT...AACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346477.7
ENST00000425629.8
ENST00000436458.5
CDS-3UTR GCA 90 bp GGAAGTGTAGGACAGCGTAGTGGAGCTCCTGCTCATCTTCTGAGATGGGGCCAGCAGGATTTTGAAGGCTaGGCTGTTTCCTTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: GSVGQRSGAPAHLLRWGQQDFEG*AVSLED
Trigger: ATCTTCCAAGGAAACAGCGCAGCCTTCAAAATCCTG...CTGGCCCCATCTCAGAAGATGAGCAGGAGCTCCACTACGCTGTCCTACACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR CCA 90 bp CCATGTTCTCTCCAATCAAGGTTATGGCTTTGGACAATTCCTCACTTGTGTATCGGAGGAACGGGTGGCTaGGGAGGAGCGCGTGATCTC +
Preference number: 4 (lower is better)
Translates to: PCSLQSRLWLWTIPHLCIGGTGG*GGARDL
Trigger: GAGATCACGCGCTCCTCCCCAGCCACCCGTTCCTCC...GATACACAAGTGAGGAATTGTCCAAAGCCATAACCTTGATTGGAGAGAACATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR CCA 90 bp TGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATCGTCTGGGTCGTTTGTaGCCACTGGAACATCAGCCC +
Preference number: 4 (lower is better)
Translates to: CCGSPSNQYTERYHVLSNRLGRL*PLEHQP
Trigger: GGGCTGATGTTCCAGTGGCCACAAACGACCCAGACG...ATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000391797.3
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp GTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTCCGTCTGGGTCGTTTGTaGCCACTGGAACATCAGCCC +
Preference number: 4 (lower is better)
Translates to: VHCCGSPSNQYTERYHVLRLGRL*PLEHQP
Trigger: GGGCTGATGTTCCAGTGGCCACAAACGACCCAGACG...GAGAACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp ATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTCTCCAGCTCATCTTCTGAGATaGGGCCAGCCTCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: IAVAALVTNTLRGTMFSPAHLLR*GQPQQG
Trigger: ACCCTGCTGAGGCTGGCCCCATCTCAGAAGATGAGC...TGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000391797.3
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp CACAAGGAGGAGACAGCCATCTACAAGCCAACAAGAGAGGCCTTAGAAGGGACCACCAGCCCTGCCTTCTaGTTTCCAATGCACAAAGAG +
Preference number: 4 (lower is better)
Translates to: HKEETAIYKPTREALEGTTSPAF*FPMHKE
Trigger: CTCTTTGTGCATTGGAAACCAGAAGGCAGGGCTGGT...GGTCCCTTCTAAGGCCTCTCTTGTTGGCTTGTAGATGGCTGTCTCCTCCTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR TCA 90 bp TGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATAGCAGACGGAAACTTTaGGACCCAGAGACCTGCCCA +
Preference number: 4 (lower is better)
Translates to: CCGSPSNQYTERYHVLSNSRRKL*DPETCP
Trigger: TGGGCAGGTCTCTGGGTCTCAAAGTTTCCGTCTGCT...ATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343300.8
CDS-3UTR TCA 90 bp CCATGTTCTCTCCAATCAAGGTTATGGCTTTGGACAATTCCTCACTTGTGTATCTCTGCAGACCCTACTTaGGGCAGCTCCAGGACCCCG +
Preference number: 4 (lower is better)
Translates to: PCSLQSRLWLWTIPHLCISADPT*GSSRTP
Trigger: CGGGGTCCTGGAGCTGCCTCAAGTAGGGTCTGCAGA...GATACACAAGTGAGGAATTGTCCAAAGCCATAACCTTGATTGGAGAGAACATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR TCA 90 bp CCTTGTGGAAGTGTAGGACAGCGTAGTGGAGCTCCTGCTCATCTTCTGAGATGGAGAGGAAAGACCATGTaGAGACACAAGGAGGAGACA +
Preference number: 4 (lower is better)
Translates to: PCGSVGQRSGAPAHLLRWRGKTM*RHKEET
Trigger: TGTCTCCTCCTTGTGTCTTCACATGGTCTTTCCTCT...CCATCTCAGAAGATGAGCAGGAGCTCCACTACGCTGTCCTACACTTCCACAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343300.8
ENST00000359982.8
CDS-3UTR TCA 90 bp CACAAGGAGGAGACAGCCATCTACAAGCCAACAAGAGAGGCCTTAGAAGGGACCAGAGGAAAGACCATGTaGAGACACAAGGAGGAGACA +
Preference number: 4 (lower is better)
Translates to: HKEETAIYKPTREALEGTRGKTM*RHKEET
Trigger: TGTCTCCTCCTTGTGTCTTCACATGGTCTTTCCTCT...GGTCCCTTCTAAGGCCTCTCTTGTTGGCTTGTAGATGGCTGTCTCCTCCTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR TCA 90 bp GCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTTGGAGCCTGAGACCATaGCGGGGTTCACATCATCCG +
Preference number: 4 (lower is better)
Translates to: AALVTNTLRGTMFSPIKVWSLRP*RGSHHP
Trigger: CGGATGATGTGAACCCCGTCATGGTCTCAGGCTCCA...AACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346477.7
ENST00000425629.8
ENST00000436458.5
CDS-3UTR TCA 90 bp TTCTGTGTTTATGTCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACTGGAGCCTGAGACCATaGCGGGGTTCACATCATCCG +
Preference number: 4 (lower is better)
Translates to: FCVYVTRFVVHCCGSPSNWSLRP*RGSHHP
Trigger: CGGATGATGTGAACCCCGTCATGGTCTCAGGCTCCA...GTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGACATAAACACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346477.7
ENST00000425629.8
ENST00000436458.5
CDS-3UTR TCA 90 bp TTCTGTGTTTATGTCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACGTTCTGAACAGGGGGTaGCACAGACACCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: FCVYVTRFVVHCCGSPSNVLNRG*HRHLVL
Trigger: CAGCACCAGGTGTCTGTGTCACCCCCTGTTCAGAAC...GTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGACATAAACACAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS-3UTR TCA 90 bp GTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTGGGATTACAGGCGTaGGCCACTGCTAACTGTGGT +
Preference number: 4 (lower is better)
Translates to: VVHCCGSPSNQYTERYHVLGLQA*ATANCG
Trigger: ACCACAGTTAGCAGTGGCTCACGCCTGTAATCCCAG...AACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS-3UTR GCA 90 bp GTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGTCACAGAAGAGGAACTaGGAAGCCACAAGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: VAALVTNTLRGTMFSPIKSQKRN*EATSPR
Trigger: CCGAGGGCTTGTGGCTTCGCAGTTCCTCTTCTGTGA...CTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
ENST00000436458.5
CDS-3UTR CCA 90 bp AAAATAAAGTTCTGTGTTTATGTCACTCGGTTTGTGGTACATTGCTGTGGCAGCGGAGGAACGGGTGGCTaGGGAGGAGCGCGTGATCTC +
Preference number: 4 (lower is better)
Translates to: KIKFCVYVTRFVVHCCGSGGTGG*GGARDL
Trigger: GAGATCACGCGCTCCTCCCCAGCCACCCGTTCCTCC...GCTGCCACAGCAATGTACCACAAACCGAGTGACATAAACACAGAACTTTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000436458.5
CDS-3UTR CCA 90 bp TTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATGGTCGTTTGTGGCCACTaGAACATCAGCCCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: LWYIAVAALVTNTLRGTMVVCGH*NISPFQ
Trigger: CTGGAAGGGGCTGATGTTCCAGTGGCCACAAACGAC...CATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp GTTTATGTCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACCGTCTGGGTCGTTTGTaGCCACTGGAACATCAGCCC +
Preference number: 4 (lower is better)
Translates to: VYVTRFVVHCCGSPSNQYRLGRL*PLEHQP
Trigger: GGGCTGATGTTCCAGTGGCCACAAACGACCCAGACG...GTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGACATAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp TTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATCGTCTGGGTCGTTTGTaGCCACTGGAACATCAGCCC +
Preference number: 4 (lower is better)
Translates to: FVVHCCGSPSNQYTERYHRLGRL*PLEHQP
Trigger: GGGCTGATGTTCCAGTGGCCACAAACGACCCAGACG...ATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp TTCTGTGTTTATGTCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACGCTCATCTTCTGAGATaGGGCCAGCCTCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: FCVYVTRFVVHCCGSPSNAHLLR*GQPQQG
Trigger: ACCCTGCTGAGGCTGGCCCCATCTCAGAAGATGAGC...GTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGACATAAACACAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp TCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGATTTCTGTGGAGCATCTaGGGTGGAAAGAGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: SLGLWYIAVAALVTNTLRFLWSI*GGKRWP
Trigger: CGGCCACCTCTTTCCACCCCAGATGCTCCACAGAAA...TCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359982.8
CDS-3UTR CCA 90 bp GCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTTGGTGCTGTGGCCTCTaGGCCTACTCCTTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: AALVTNTLRGTMFSPIKVWCCGL*AYSFSA
Trigger: GGCTGAAAAGGAGTAGGCCCAGAGGCCACAGCACCA...AACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS-3UTR CCA 90 bp GGAGGAGACAGCCATCTACAAGCCAACAAGAGAGGCCTTAGAAGGGACCAACCCGGTGAGGAATTGATCTaGGGAAATCTGGATGGACAA +
Preference number: 4 (lower is better)
Translates to: GGDSHLQANKRGLRRDQPGEELI*GNLDGQ
Trigger: TTGTCCATCCAGATTTCCCCAGATCAATTCCTCACC...GGGTTGGTCCCTTCTAAGGCCTCTCTTGTTGGCTTGTAGATGGCTGTCTCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS-3UTR TCA 90 bp AACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTATGGCTTTGGACTGGGGAGGAGCGCGTaGTCTCGGCTGTTCACAGAA +
Preference number: 4 (lower is better)
Translates to: NQYTERYHVLSNQGYGFGLGRSA*SRLFTE
Trigger: TTCTGTGAACAGCCGAGATCACGCGCTCCTCCCCAG...TCCAAAGCCATAACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
ENST00000436458.5
CDS-3UTR TCA 90 bp CCTTTGGTTCCTGAGGTTGCACCTTGTGGAAGTGTAGGACAGCGTAGTGGAGCTTGTTTTGCAGGATTTTaGAGGCTGCGCTGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: PLVPEVAPCGSVGQRSGACFAGF*RLRCFL
Trigger: AAGGAAACAGCGCAGCCTTCAAAATCCTGCAAAACA...AGCTCCACTACGCTGTCCTACACTTCCACAAGGTGCAACCTCAGGAACCAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR TCA 90 bp AAGCCAACAAGAGAGGCCTTAGAAGGGACCAACCCTGATAACACCTTGTTCTCACTCAGCAGGGTGGTCTaGAACTATGCCTGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: KPTREALEGTNPDNTLFSLSRVV*NYACLE
Trigger: TTCCAGACAGGCATAGTTTCAGACCACCCTGCTGAG...TGAGAACAAGGTGTTATCAGGGTTGGTCCCTTCTAAGGCCTCTCTTGTTGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR TCA 90 bp TGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATCTCAGCAGGGTGGTCTaGAACTATGCCTGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: CCGSPSNQYTERYHVLSNLSRVV*NYACLE
Trigger: TTCCAGACAGGCATAGTTTCAGACCACCCTGCTGAG...ATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000391797.3
ENST00000425629.8
ENST00000436458.5
CDS-3UTR TCA 90 bp ATGTCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGCTCAGCAGGGTGGTCTaGAACTATGCCTGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: MSLGLWYIAVAALVTNTLLSRVV*NYACLE
Trigger: TTCCAGACAGGCATAGTTTCAGACCACCCTGCTGAG...CAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR TCA 90 bp GTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTATGGCTTTGCTCCTGCTCATCTTCTaGGATGGGGCCAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: VTNTLRGTMFSPIKVMALLLLIF*DGASLS
Trigger: GCTGAGGCTGGCCCCATCTCAGAAGATGAGCAGGAG...CAAAGCCATAACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000391797.3
ENST00000425629.8
ENST00000436458.5
CDS-3UTR TCA 90 bp GTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTGACCTTTGGTTCCTaGGGTTGCACCTTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: VAALVTNTLRGTMFSPIKVTFGS*GCTLWK
Trigger: CTTCCACAAGGTGCAACCTCAGGAACCAAAGGTCAC...CTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000391797.3
ENST00000425629.8
ENST00000436458.5
CDS-3UTR TCA 90 bp AGAAGATTAGGACACAAACACACTCAGAGGAAAGACCATGTGAAGACACAAGGAATGACCCCTGGAGCCTaGGACCATGACGGGGTTCAC +
Preference number: 4 (lower is better)
Translates to: RRLGHKHTQRKDHVKTQGMTPGA*DHDGVH
Trigger: GTGAACCCCGTCATGGTCTCAGGCTCCAGGGGTCAT...TCCTTGTGTCTTCACATGGTCTTTCCTCTGAGTGTGTTTGTGTCCTAATCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346477.7
ENST00000425629.8
ENST00000436458.5
CDS-3UTR GCA 90 bp AGTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTATGGCTTTCCCCGGGTCTCCTCCTaGACTTCTTCGTCTGGGTCG +
Preference number: 4 (lower is better)
Translates to: SNQYTERYHVLSNQGYGFPRVSS*TSSSGS
Trigger: CGACCCAGACGAAGAAGTGCAGGAGGAGACCCGGGG...AAAGCCATAACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000391797.3
ENST00000425629.8
ENST00000436458.5
CDS-3UTR GCA 90 bp CACAAGGAGGAGACAGCCATCTACAAGCCAACAAGAGAGGCCTTAGAAGGGACCCAGGATTTTGAAGGCTaGGCTGTTTCCTTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: HKEETAIYKPTREALEGTQDFEG*AVSLED
Trigger: ATCTTCCAAGGAAACAGCGCAGCCTTCAAAATCCTG...GGTCCCTTCTAAGGCCTCTCTTGTTGGCTTGTAGATGGCTGTCTCCTCCTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000425629.8
CDS-3UTR GCA 90 bp GTCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGGACGAGGTGTTTTaGAGGATTTTGAAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: VTRFVVHCCGSPSNQYTERDEVF*RILKAA
Trigger: CGCAGCCTTCAAAATCCTGCAAAACACCTCGTCCCT...CTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000425629.8
CDS-3UTR GCA 90 bp GTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTCAGACTCAGAGAGATTTaGAGGGAGCCCAGAGGATGC +
Preference number: 4 (lower is better)
Translates to: VHCCGSPSNQYTERYHVLRLREI*REPRGC
Trigger: GCATCCTCTGGGCTCCCTGCAAATCTCTCTGAGTCT...GAGAACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR GCA 90 bp TCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAAGACTCAGAGAGATTTaGAGGGAGCCCAGAGGATGC +
Preference number: 4 (lower is better)
Translates to: SLGLWYIAVAALVTNTLRRLREI*REPRGC
Trigger: GCATCCTCTGGGCTCCCTGCAAATCTCTCTGAGTCT...TCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR GCA 90 bp ACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGGGTGGTCTGAAACTATaGCTGTCTGGAACTGGTGCT +
Preference number: 4 (lower is better)
Translates to: TRFVVHCCGSPSNQYTERGGLKL*LSGTGA
Trigger: AGCACCAGTTCCAGACAGGCATAGTTTCAGACCACC...CCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR GCA 90 bp AAGACACAAGGAGGAGACAGCCATCTACAAGCCAACAAGAGAGGCCTTAGAAGGGGTGGTCTGAAACTATaGCTGTCTGGAACTGGTGCT +
Preference number: 4 (lower is better)
Translates to: KTQGGDSHLQANKRGLRRGGLKL*LSGTGA
Trigger: AGCACCAGTTCCAGACAGGCATAGTTTCAGACCACC...CCTTCTAAGGCCTCTCTTGTTGGCTTGTAGATGGCTGTCTCCTCCTTGTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp TTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTCGTTTGTGGCCACTaGAACATCAGCCCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: FVVHCCGSPSNQYTERYHVVCGH*NISPFQ
Trigger: CTGGAAGGGGCTGATGTTCCAGTGGCCACAAACGAC...ATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp TTCTGTGTTTATGTCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACGTCGTTTGTGGCCACTaGAACATCAGCCCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: FCVYVTRFVVHCCGSPSNVVCGH*NISPFQ
Trigger: CTGGAAGGGGCTGATGTTCCAGTGGCCACAAACGAC...GTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGACATAAACACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp GTTTATGTCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACGTCGTTTGTGGCCACTaGAACATCAGCCCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: VYVTRFVVHCCGSPSNQYVVCGH*NISPFQ
Trigger: CTGGAAGGGGCTGATGTTCCAGTGGCCACAAACGAC...GTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGACATAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp GTTCCTGAGGTTGCACCTTGTGGAAGTGTAGGACAGCGTAGTGGAGCTCCTGCTCACGCACAGAGAGCTTaGAAGATGTATAACCGTATT +
Preference number: 4 (lower is better)
Translates to: VPEVAPCGSVGQRSGAPAHAQRA*KMYNRI
Trigger: AATACGGTTATACATCTTCCAAGCTCTCTGTGCGTG...AGCAGGAGCTCCACTACGCTGTCCTACACTTCCACAAGGTGCAACCTCAGGAAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR CCA 90 bp GAAGAGAAGATTAGGACACAAACACACTCAGAGGAAAGACCATGTGAAGACACAGAGATGTTGGGCCTGTaGGTCAGGGCCATCACACGC +
Preference number: 4 (lower is better)
Translates to: EEKIRTQTHSEERPCEDTEMLGL*VRAITR
Trigger: GCGTGTGATGGCCCTGACCCACAGGCCCAACATCTC...TGTGTCTTCACATGGTCTTTCCTCTGAGTGTGTTTGTGTCCTAATCTTCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp CCTGAGGTTGCACCTTGTGGAAGTGTAGGACAGCGTAGTGGAGCTCCTGCTCATCTCCAATCAAGGTTATaGCTTTGGACAATTCCTCAC +
Preference number: 4 (lower is better)
Translates to: PEVAPCGSVGQRSGAPAHLQSRL*LWTIPH
Trigger: GTGAGGAATTGTCCAAAGCCATAACCTTGATTGGAG...ATGAGCAGGAGCTCCACTACGCTGTCCTACACTTCCACAAGGTGCAACCTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR CCA 90 bp GTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTATGGCTTTGGCTGAGGCAGGAGAATaGTGTGAACCCAGGGGGCGA +
Preference number: 4 (lower is better)
Translates to: VTNTLRGTMFSPIKVMALAEAGE*CEPRGR
Trigger: TCGCCCCCTGGGTTCACACCATTCTCCTGCCTCAGC...CAAAGCCATAACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS-3UTR TCA 90 bp TCTCCAATCAAGGTTATGGCTTTGGACAATTCCTCACTTGTGTATCTTGATTTCTCTGCAGACCCTACTTaGGGCAGCTCCAGGACCCCG +
Preference number: 4 (lower is better)
Translates to: SPIKVMALDNSSLVYLDFSADPT*GSSRTP
Trigger: CGGGGTCCTGGAGCTGCCTCAAGTAGGGTCTGCAGA...GAAATCAAGATACACAAGTGAGGAATTGTCCAAAGCCATAACCTTGATTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR TCA 90 bp CTCTTGGACAGAAGTCCTGTGGTCTGCCATATATACGAAGGTATTTATATAGTCCTCCTGCTCATCTTCTaGGATGGGGCCAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LLDRSPVVCHIYEGIYIVLLLIF*DGASLS
Trigger: GCTGAGGCTGGCCCCATCTCAGAAGATGAGCAGGAG...GACTATATAAATACCTTCGTATATATGGCAGACCACAGGACTTCTGTCCAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346477.7
ENST00000425629.8
CDS-3UTR TCA 90 bp TCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAAGTACTCAGTGTCGGTaGCCTTTGGTTCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: SLGLWYIAVAALVTNTLRSTQCR*PLVPEV
Trigger: AACCTCAGGAACCAAAGGTCACCGACACTGAGTACT...TCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR TCA 90 bp ATGTCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGTATTTTGGGGAGTCGTaGAGAGTTCTGAACAGGGGG +
Preference number: 4 (lower is better)
Translates to: MSLGLWYIAVAALVTNTLYFGES*RVLNRG
Trigger: CCCCCTGTTCAGAACTCTTCACGACTCCCCAAAATA...CAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS-3UTR GCA 90 bp GGTACCATGTTCTCTCCAATCAAGGTTATGGCTTTGGACAATTCCTCACTTGTGTCACAGAAGAGGAACTaGGAAGCCACAAGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: GTMFSPIKVMALDNSSLVSQKRN*EATSPR
Trigger: CCGAGGGCTTGTGGCTTCGCAGTTCCTCTTCTGTGA...CACAAGTGAGGAATTGTCCAAAGCCATAACCTTGATTGGAGAGAACATGGTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR GCA 90 bp AAGACACAAGGAGGAGACAGCCATCTACAAGCCAACAAGAGAGGCCTTAGAAGGGAAATCTCCTTCTTCTaGAGACCCTACTTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KTQGGDSHLQANKRGLRREISFF*RPYLRQ
Trigger: CTGCCTCAAGTAGGGTCTGCAGAAGAAGGAGATTTC...CCTTCTAAGGCCTCTCTTGTTGGCTTGTAGATGGCTGTCTCCTCCTTGTGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR GCA 90 bp GTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGGTGGTCTGAAACTATaGCTGTCTGGAACTGGTGCT +
Preference number: 4 (lower is better)
Translates to: VAALVTNTLRGTMFSPIKGGLKL*LSGTGA
Trigger: AGCACCAGTTCCAGACAGGCATAGTTTCAGACCACC...CTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000391797.3
ENST00000425629.8
ENST00000436458.5
CDS-3UTR GCA 90 bp AAGACACAAGGAGGAGACAGCCATCTACAAGCCAACAAGAGAGGCCTTAGAAGGTTGCACTGGCTGGGCTaGTTTCTTCCTTCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: KTQGGDSHLQANKRGLRRLHWLG*FLPSSL
Trigger: AAGACTAGAAGGAAGAAAGCAGCCCAGCCAGTGCAA...CCTTCTAAGGCCTCTCTTGTTGGCTTGTAGATGGCTGTCTCCTCCTTGTGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346477.7
ENST00000425629.8
ENST00000436458.5
CDS-3UTR GCA 90 bp GTCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGTCTCCTGCTTCAACCTaGAGAAGTACCTGGGATTAC +
Preference number: 4 (lower is better)
Translates to: VTRFVVHCCGSPSNQYTESPAST*RSTWDY
Trigger: GTAATCCCAGGTACTTCTGCAGGTTGAAGCAGGAGA...CTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS-3UTR CCA 90 bp GTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTACCATAGTACGAGGCTaGAAGGGTAGTGGGCAATCT +
Preference number: 4 (lower is better)
Translates to: VVHCCGSPSNQYTERYHVTIVRG*KGSGQS
Trigger: AGATTGCCCACTACCCTTCCAGCCTCGTACTATGGT...AACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
CDS-3UTR CCA 90 bp CTGAGAGGTACCATGTTCTCTCCAATCAAGGTTATGGCTTTGGACAATTCCTCAGTCGTTTGTGGCCACTaGAACATCAGCCCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: LRGTMFSPIKVMALDNSSVVCGH*NISPFQ
Trigger: CTGGAAGGGGCTGATGTTCCAGTGGCCACAAACGAC...TGAGGAATTGTCCAAAGCCATAACCTTGATTGGAGAGAACATGGTACCTCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR CCA 90 bp CTCTTGGACAGAAGTCCTGTGGTCTGCCATATATACGAAGGTATTTATATAGTCGAGATGTTGGGCCTGTaGGTCAGGGCCATCACACGC +
Preference number: 4 (lower is better)
Translates to: LLDRSPVVCHIYEGIYIVEMLGL*VRAITR
Trigger: GCGTGTGATGGCCCTGACCCACAGGCCCAACATCTC...GACTATATAAATACCTTCGTATATATGGCAGACCACAGGACTTCTGTCCAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346477.7
ENST00000425629.8
CDS-3UTR CCA 90 bp AAGAGAAGATTAGGACACAAACACACTCAGAGGAAAGACCATGTGAAGACACAAGAGATGTTGGGCCTGTaGGTCAGGGCCATCACACGC +
Preference number: 4 (lower is better)
Translates to: KRRLGHKHTQRKDHVKTQEMLGL*VRAITR
Trigger: GCGTGTGATGGCCCTGACCCACAGGCCCAACATCTC...TTGTGTCTTCACATGGTCTTTCCTCTGAGTGTGTTTGTGTCCTAATCTTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp GTTTATGTCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACGCTGCGCTGTTTCCTTaGAAGATGCTGATGGCCACT +
Preference number: 4 (lower is better)
Translates to: VYVTRFVVHCCGSPSNQYAALFP*KMLMAT
Trigger: AGTGGCCATCAGCATCTTCCAAGGAAACAGCGCAGC...GTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGACATAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000425629.8
CDS-3UTR CCA 90 bp TTCTGTGTTTATGTCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACGCTGCGCTGTTTCCTTaGAAGATGCTGATGGCCACT +
Preference number: 4 (lower is better)
Translates to: FCVYVTRFVVHCCGSPSNAALFP*KMLMAT
Trigger: AGTGGCCATCAGCATCTTCCAAGGAAACAGCGCAGC...GTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGACATAAACACAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000425629.8
CDS-3UTR CCA 90 bp TGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATAGTGTCGGTGACCTTTaGTTCCTGAGGTTGCACCTT +
Preference number: 4 (lower is better)
Translates to: CCGSPSNQYTERYHVLSNSVGDL*FLRLHL
Trigger: AAGGTGCAACCTCAGGAACCAAAGGTCACCGACACT...ATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000391797.3
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp GTTCCTGAGGTTGCACCTTGTGGAAGTGTAGGACAGCGTAGTGGAGCTCCTGCTTCAAGGTTATGGCTTTaGACAATTCCTCACTTGTGT +
Preference number: 4 (lower is better)
Translates to: VPEVAPCGSVGQRSGAPASRLWL*TIPHLC
Trigger: ACACAAGTGAGGAATTGTCCAAAGCCATAACCTTGA...AGCAGGAGCTCCACTACGCTGTCCTACACTTCCACAAGGTGCAACCTCAGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR CCA 90 bp CACAAGGAGGAGACAGCCATCTACAAGCCAACAAGAGAGGCCTTAGAAGGGACCCTCCAATCAAGGTTATaGCTTTGGACAATTCCTCAC +
Preference number: 4 (lower is better)
Translates to: HKEETAIYKPTREALEGTLQSRL*LWTIPH
Trigger: GTGAGGAATTGTCCAAAGCCATAACCTTGATTGGAG...GGTCCCTTCTAAGGCCTCTCTTGTTGGCTTGTAGATGGCTGTCTCCTCCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp GTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTCACCAGCCCTGCCTTCTaGTTTCCAATGCACAAAGAG +
Preference number: 4 (lower is better)
Translates to: VHCCGSPSNQYTERYHVLTSPAF*FPMHKE
Trigger: CTCTTTGTGCATTGGAAACCAGAAGGCAGGGCTGGT...GAGAACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp TACAAGCCAACAAGAGAGGCCTTAGAAGGGACCAACCCTGATAACACCTTGTTCATCCGTGTTTTGCACTaGCTGGGCTGCTTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: YKPTREALEGTNPDNTLFIRVLH*LGCFLP
Trigger: AGGAAGAAAGCAGCCCAGCCAGTGCAAAACACGGAT...GAACAAGGTGTTATCAGGGTTGGTCCCTTCTAAGGCCTCTCTTGTTGGCTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346477.7
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp ACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTATGGCTTTGGACGTAATCTCAGCACTTTaGGAGGCCGAGGAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: TNTLRGTMFSPIKVMALDVISAL*EAEEGR
Trigger: TCTGCCCTCCTCGGCCTCCCAAAGTGCTGAGATTAC...GTCCAAAGCCATAACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS-3UTR CCA 90 bp TTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATGACCTGCAGAAGTACCTaGGATTACAGGCAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: LWYIAVAALVTNTLRGTMTCRST*DYRQVP
Trigger: TGGCACTTGCCTGTAATCCCAGGTACTTCTGCAGGT...CATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS-3UTR TCA 90 bp ACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTATGGCTTTGGACCTCAGCAGGGTGGTCTaGAACTATGCCTGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: TNTLRGTMFSPIKVMALDLSRVV*NYACLE
Trigger: TTCCAGACAGGCATAGTTTCAGACCACCCTGCTGAG...GTCCAAAGCCATAACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000391797.3
ENST00000425629.8
ENST00000436458.5
CDS-3UTR TCA 90 bp GCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTAGTACTCAGTGTCGGTaGCCTTTGGTTCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: AALVTNTLRGTMFSPIKVSTQCR*PLVPEV
Trigger: AACCTCAGGAACCAAAGGTCACCGACACTGAGTACT...AACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000391797.3
ENST00000425629.8
ENST00000436458.5
CDS-3UTR TCA 90 bp CGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACGTGTATCTTGATTTCTaGGTACTCAGTGTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: RFVVHCCGSPSNQYTERYVYLDF*VLSVGD
Trigger: GTCACCGACACTGAGTACTCAGAAATCAAGATACAC...GTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR GCA 90 bp TATGTCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTAGGGACGAGGTGTTTTaGAGGATTTTGAAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: YVTRFVVHCCGSPSNQYTRDEVF*RILKAA
Trigger: CGCAGCCTTCAAAATCCTGCAAAACACCTCGTCCCT...AGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000425629.8
CDS-3UTR GCA 90 bp TACAAGCCAACAAGAGAGGCCTTAGAAGGGACCAACCCTGATAACACCTTGTTCGAAATCTCCTTCTTCTaGAGACCCTACTTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: YKPTREALEGTNPDNTLFEISFF*RPYLRQ
Trigger: CTGCCTCAAGTAGGGTCTGCAGAAGAAGGAGATTTC...GAACAAGGTGTTATCAGGGTTGGTCCCTTCTAAGGCCTCTCTTGTTGGCTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR GCA 90 bp AGGAAAGACCATGTGAAGACACAAGGAGGAGACAGCCATCTACAAGCCAACAAGGAAATCTCCTTCTTCTaGAGACCCTACTTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: RKDHVKTQGGDSHLQANKEISFF*RPYLRQ
Trigger: CTGCCTCAAGTAGGGTCTGCAGAAGAAGGAGATTTC...CTTGTTGGCTTGTAGATGGCTGTCTCCTCCTTGTGTCTTCACATGGTCTTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR GCA 90 bp CCTAGTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTATGGCAGACTCAGAGAGATTTaGAGGGAGCCCAGAGGATGC +
Preference number: 4 (lower is better)
Translates to: PSNQYTERYHVLSNQGYGRLREI*REPRGC
Trigger: GCATCCTCTGGGCTCCCTGCAAATCTCTCTGAGTCT...GCCATAACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000391797.3
ENST00000425629.8
ENST00000436458.5
CDS-3UTR GCA 90 bp TCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTGCTGATGACCAATaGACAAAGAGACTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: SLGLWYIAVAALVTNTLRGADDQ*TKRLRE
Trigger: CTCTCTGAGTCTCTTTGTGCATTGGTCATCAGCACC...TCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343300.8
CDS-3UTR GCA 90 bp ATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTCTCCAGGTGCTGATGACCAATaGACAAAGAGACTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: IAVAALVTNTLRGTMFSPGADDQ*TKRLRE
Trigger: CTCTCTGAGTCTCTTTGTGCATTGGTCATCAGCACC...TGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343300.8
ENST00000391797.3
CDS-3UTR GCA 90 bp GCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTGGTGGTCTGAAACTATaGCTGTCTGGAACTGGTGCT +
Preference number: 4 (lower is better)
Translates to: AALVTNTLRGTMFSPIKVGGLKL*LSGTGA
Trigger: AGCACCAGTTCCAGACAGGCATAGTTTCAGACCACC...AACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000391797.3
ENST00000425629.8
ENST00000436458.5
CDS-3UTR GCA 90 bp ACACAGTGTTATGGGCTAAATTGTTCCCTTCTAAAATTCATATGTTGGAAGTCCGCTAGCTCCCCAGACTaGTCCCAGGACACCACCAGC +
Preference number: 4 (lower is better)
Translates to: TQCYGLNCSLLKFICWKSASSPD*SQDTTS
Trigger: GCTGGTGGTGTCCTGGGAGCAGTCTGGGGAGCTAGC...GGACTTCCAACATATGAATTTTAGAAGGGAACAATTTAGCCCATAACACTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346477.7
ENST00000425629.8
CDS-3UTR CCA 90 bp GTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGATGGCCACTTTCTGTaGAGCATAGGAGACATTGAG +
Preference number: 4 (lower is better)
Translates to: VAALVTNTLRGTMFSPIKDGHFL*SIGDIE
Trigger: CTCAATGTCTCCTATGCTCCACAGAAAGTGGCCATC...CTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000391797.3
ENST00000425629.8
CDS-3UTR CCA 90 bp AAGAGAAGATTAGGACACAAACACACTCAGAGGAAAGACCATGTGAAGACACAAGCTCATCTTCTGAGATaGGGCCAGCCTCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: KRRLGHKHTQRKDHVKTQAHLLR*GQPQQG
Trigger: ACCCTGCTGAGGCTGGCCCCATCTCAGAAGATGAGC...TTGTGTCTTCACATGGTCTTTCCTCTGAGTGTGTTTGTGTCCTAATCTTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp TTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATAGTGTCGGTGACCTTTaGTTCCTGAGGTTGCACCTT +
Preference number: 4 (lower is better)
Translates to: FVVHCCGSPSNQYTERYHSVGDL*FLRLHL
Trigger: AAGGTGCAACCTCAGGAACCAAAGGTCACCGACACT...ATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp GTGTTTATGTCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATAGTGTCGGTGACCTTTaGTTCCTGAGGTTGCACCTT +
Preference number: 4 (lower is better)
Translates to: VFMSLGLWYIAVAALVTNSVGDL*FLRLHL
Trigger: AAGGTGCAACCTCAGGAACCAAAGGTCACCGACACT...ATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGACATAAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp TCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGTGTTTTGCACTGGCTaGGCTGCTTTCTTCCTTCTA +
Preference number: 4 (lower is better)
Translates to: SLGLWYIAVAALVTNTLRVFCTG*AAFFLL
Trigger: TAGAAGGAAGAAAGCAGCCCAGCCAGTGCAAAACAC...TCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346477.7
ENST00000425629.8
ENST00000436458.5
CDS-3UTR TCA 90 bp AGAAGATTAGGACACAAACACACTCAGAGGAAAGACCATGTGAAGACACAAGGACTCAGCAGGGTGGTCTaGAACTATGCCTGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: RRLGHKHTQRKDHVKTQGLSRVV*NYACLE
Trigger: TTCCAGACAGGCATAGTTTCAGACCACCCTGCTGAG...TCCTTGTGTCTTCACATGGTCTTTCCTCTGAGTGTGTTTGTGTCCTAATCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR TCA 90 bp CTATACGAAAATAAAGTTCTGTGTTTATGTCACTCGGTTTGTGGTACATTGCTGCTCCTGCTCATCTTCTaGGATGGGGCCAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LYENKVLCLCHSVCGTLLLLLIF*DGASLS
Trigger: GCTGAGGCTGGCCCCATCTCAGAAGATGAGCAGGAG...CAGCAATGTACCACAAACCGAGTGACATAAACACAGAACTTTATTTTCGTATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR TCA 90 bp AGAAGATTAGGACACAAACACACTCAGAGGAAAGACCATGTGAAGACACAAGGAGTGACCTTTGGTTCCTaGGGTTGCACCTTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: RRLGHKHTQRKDHVKTQGVTFGS*GCTLWK
Trigger: CTTCCACAAGGTGCAACCTCAGGAACCAAAGGTCAC...TCCTTGTGTCTTCACATGGTCTTTCCTCTGAGTGTGTTTGTGTCCTAATCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR TCA 90 bp AAGATTAGGACACAAACACACTCAGAGGAAAGACCATGTGAAGACACAAGGAGGAGTACTCAGTGTCGGTaGCCTTTGGTTCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: KIRTQTHSEERPCEDTRRSTQCR*PLVPEV
Trigger: AACCTCAGGAACCAAAGGTCACCGACACTGAGTACT...CCTCCTTGTGTCTTCACATGGTCTTTCCTCTGAGTGTGTTTGTGTCCTAATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR TCA 90 bp TACAAGCCAACAAGAGAGGCCTTAGAAGGGACCAACCCTGATAACACCTTGTTCGTGTATCTTGATTTCTaGGTACTCAGTGTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: YKPTREALEGTNPDNTLFVYLDF*VLSVGD
Trigger: GTCACCGACACTGAGTACTCAGAAATCAAGATACAC...GAACAAGGTGTTATCAGGGTTGGTCCCTTCTAAGGCCTCTCTTGTTGGCTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR TCA 90 bp TTAGATGGAAATTATTTCCCTGCCTTACAGAGCAGGGACATAAAGCGACTTGCTAGTCGTGAAGAGTTCTaGACAGGGGGTGACACAGAC +
Preference number: 4 (lower is better)
Translates to: LDGNYFPALQSRDIKRLASREEF*TGGDTD
Trigger: GTCTGTGTCACCCCCTGTTCAGAACTCTTCACGACT...AGCAAGTCGCTTTATGTCCCTGCTCTGTAAGGCAGGGAAATAATTTCCATCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS-3UTR GCA 90 bp TGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAGGATTTTGAAGGCTaGGCTGTTTCCTTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: CCGSPSNQYTERYHVLSNQDFEG*AVSLED
Trigger: ATCTTCCAAGGAAACAGCGCAGCCTTCAAAATCCTG...ATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
ENST00000425629.8
CDS-3UTR GCA 90 bp GAGAAGATTAGGACACAAACACACTCAGAGGAAAGACCATGTGAAGACACAAGGAGGGACGAGGTGTTTTaGAGGATTTTGAAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: EKIRTQTHSEERPCEDTRRDEVF*RILKAA
Trigger: CGCAGCCTTCAAAATCCTGCAAAACACCTCGTCCCT...CCTTGTGTCTTCACATGGTCTTTCCTCTGAGTGTGTTTGTGTCCTAATCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000425629.8
CDS-3UTR GCA 90 bp CCTAGTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTATGGCAGGGACGAGGTGTTTTaGAGGATTTTGAAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: PSNQYTERYHVLSNQGYGRDEVF*RILKAA
Trigger: CGCAGCCTTCAAAATCCTGCAAAACACCTCGTCCCT...GCCATAACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
ENST00000425629.8
CDS-3UTR GCA 90 bp TACAAGCCAACAAGAGAGGCCTTAGAAGGGACCAACCCTGATAACACCTTGTTCCCTTCTGGTTTCCAATaGACAAAGAGACTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: YKPTREALEGTNPDNTLFPSGFQ*TKRLRE
Trigger: CTCTCTGAGTCTCTTTGTGCATTGGAAACCAGAAGG...GAACAAGGTGTTATCAGGGTTGGTCCCTTCTAAGGCCTCTCTTGTTGGCTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR GCA 90 bp TATGTCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTTTGCACTGGCTGGGCTaGTTTCTTCCTTCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: YVTRFVVHCCGSPSNQYTLHWLG*FLPSSL
Trigger: AAGACTAGAAGGAAGAAAGCAGCCCAGCCAGTGCAA...AGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346477.7
ENST00000425629.8
ENST00000436458.5
CDS-3UTR GCA 90 bp AAGATTAGGACACAAACACACTCAGAGGAAAGACCATGTGAAGACACAAGGAGGACATCATCCGTGTTTTaGACTGGCTGGGCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: KIRTQTHSEERPCEDTRRTSSVF*TGWAAF
Trigger: GAAAGCAGCCCAGCCAGTGCAAAACACGGATGATGT...CCTCCTTGTGTCTTCACATGGTCTTTCCTCTGAGTGTGTTTGTGTCCTAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346477.7
ENST00000425629.8
ENST00000436458.5
CDS-3UTR GCA 90 bp AATTCTCCTGCTTCAACCTGCAGAAGTACCTGGGATTACAGGCAAGTGCCACCAAGCCTTAGAAGAAATTaGCAGCAGAAACCGTCTGTT +
Preference number: 4 (lower is better)
Translates to: NSPASTCRSTWDYRQVPPSLRRN*QQKPSV
Trigger: AACAGACGGTTTCTGCTGGCAATTTCTTCTAAGGCT...TGGTGGCACTTGCCTGTAATCCCAGGTACTTCTGCAGGTTGAAGCAGGAGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS-3UTR CCA 90 bp CTGAGAGGTACCATGTTCTCTCCAATCAAGGTTATGGCTTTGGACAATTCCTCAACCATAGTACGAGGCTaGAAGGGTAGTGGGCAATCT +
Preference number: 4 (lower is better)
Translates to: LRGTMFSPIKVMALDNSSTIVRG*KGSGQS
Trigger: AGATTGCCCACTACCCTTCCAGCCTCGTACTATGGT...TGAGGAATTGTCCAAAGCCATAACCTTGATTGGAGAGAACATGGTACCTCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR CCA 90 bp CCTTGTGGAAGTGTAGGACAGCGTAGTGGAGCTCCTGCTCATCTTCTGAGATGGCGTATTTCATCCATTTaGACTTCAACCGAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: PCGSVGQRSGAPAHLLRWRISSI*TSTERS
Trigger: ACTTCTTTCGGTTGAAGTCCAAATGGATGAAATACG...CCATCTCAGAAGATGAGCAGGAGCTCCACTACGCTGTCCTACACTTCCACAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR CCA 90 bp GCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTGATGGCCACTTTCTGTaGAGCATAGGAGACATTGAG +
Preference number: 4 (lower is better)
Translates to: AALVTNTLRGTMFSPIKVDGHFL*SIGDIE
Trigger: CTCAATGTCTCCTATGCTCCACAGAAAGTGGCCATC...AACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000391797.3
ENST00000425629.8
CDS-3UTR CCA 90 bp AGAAGATTAGGACACAAACACACTCAGAGGAAAGACCATGTGAAGACACAAGGAGCTGCGCTGTTTCCTTaGAAGATGCTGATGGCCACT +
Preference number: 4 (lower is better)
Translates to: RRLGHKHTQRKDHVKTQGAALFP*KMLMAT
Trigger: AGTGGCCATCAGCATCTTCCAAGGAAACAGCGCAGC...TCCTTGTGTCTTCACATGGTCTTTCCTCTGAGTGTGTTTGTGTCCTAATCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000425629.8
CDS-3UTR CCA 90 bp GAGAAGATTAGGACACAAACACACTCAGAGGAAAGACCATGTGAAGACACAAGGAGTGTCGGTGACCTTTaGTTCCTGAGGTTGCACCTT +
Preference number: 4 (lower is better)
Translates to: EKIRTQTHSEERPCEDTRSVGDL*FLRLHL
Trigger: AAGGTGCAACCTCAGGAACCAAAGGTCACCGACACT...CCTTGTGTCTTCACATGGTCTTTCCTCTGAGTGTGTTTGTGTCCTAATCTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp TTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTGTTTTGCACTGGCTaGGCTGCTTTCTTCCTTCTA +
Preference number: 4 (lower is better)
Translates to: FVVHCCGSPSNQYTERYHVFCTG*AAFFLL
Trigger: TAGAAGGAAGAAAGCAGCCCAGCCAGTGCAAAACAC...ATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346477.7
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp GTGTTTATGTCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATGTGTTTTGCACTGGCTaGGCTGCTTTCTTCCTTCTA +
Preference number: 4 (lower is better)
Translates to: VFMSLGLWYIAVAALVTNVFCTG*AAFFLL
Trigger: TAGAAGGAAGAAAGCAGCCCAGCCAGTGCAAAACAC...ATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGACATAAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346477.7
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp CACAAGGAGGAGACAGCCATCTACAAGCCAACAAGAGAGGCCTTAGAAGGGACCTTTCTTCAATTTCACTaGAATAGTGGAGACTGGGAT +
Preference number: 4 (lower is better)
Translates to: HKEETAIYKPTREALEGTFLQFH*NSGDWD
Trigger: ATCCCAGTCTCCACTATTCCAGTGAAATTGAAGAAA...GGTCCCTTCTAAGGCCTCTCTTGTTGGCTTGTAGATGGCTGTCTCCTCCTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS-3UTR TCA 90 bp TGGGCCTACTCCTTTTCAGCCTTAGAAGAAATTGCCAGCAGAAACCGTCTGTTATGTTTTGCAGGATTTTaGAGGCTGCGCTGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: WAYSFSALEEIASRNRLLCFAGF*RLRCFL
Trigger: AAGGAAACAGCGCAGCCTTCAAAATCCTGCAAAACA...TAACAGACGGTTTCTGCTGGCAATTTCTTCTAAGGCTGAAAAGGAGTAGGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS-3UTR TCA 90 bp CATGTTCTCTCCAATCAAGGTTATGGCTTTGGACAATTCCTCACTTGTGTATCTGTGACCTTTGGTTCCTaGGGTTGCACCTTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: HVLSNQGYGFGQFLTCVSVTFGS*GCTLWK
Trigger: CTTCCACAAGGTGCAACCTCAGGAACCAAAGGTCAC...AGATACACAAGTGAGGAATTGTCCAAAGCCATAACCTTGATTGGAGAGAACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR TCA 90 bp AAGATTAGGACACAAACACACTCAGAGGAAAGACCATGTGAAGACACAAGGAGGAGAGGAAAGACCATGTaGAGACACAAGGAGGAGACA +
Preference number: 4 (lower is better)
Translates to: KIRTQTHSEERPCEDTRRRGKTM*RHKEET
Trigger: TGTCTCCTCCTTGTGTCTTCACATGGTCTTTCCTCT...CCTCCTTGTGTCTTCACATGGTCTTTCCTCTGAGTGTGTTTGTGTCCTAATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR GCA 90 bp TACGAAAATAAAGTTCTGTGTTTATGTCACTCGGTTTGTGGTACATTGCTGTGGTCACAGAAGAGGAACTaGGAAGCCACAAGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: YENKVLCLCHSVCGTLLWSQKRN*EATSPR
Trigger: CCGAGGGCTTGTGGCTTCGCAGTTCCTCTTCTGTGA...CCACAGCAATGTACCACAAACCGAGTGACATAAACACAGAACTTTATTTTCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000436458.5
CDS-3UTR GCA 90 bp GTTTATGTCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACCAGGATTTTGAAGGCTaGGCTGTTTCCTTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: VYVTRFVVHCCGSPSNQYQDFEG*AVSLED
Trigger: ATCTTCCAAGGAAACAGCGCAGCCTTCAAAATCCTG...GTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGACATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000425629.8
CDS-3UTR GCA 90 bp AGTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTATGGCTTTAGACTCAGAGAGATTTaGAGGGAGCCCAGAGGATGC +
Preference number: 4 (lower is better)
Translates to: SNQYTERYHVLSNQGYGFRLREI*REPRGC
Trigger: GCATCCTCTGGGCTCCCTGCAAATCTCTCTGAGTCT...AAAGCCATAACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000391797.3
ENST00000425629.8
ENST00000436458.5
CDS-3UTR GCA 90 bp TTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATCCTTCTGGTTTCCAATaGACAAAGAGACTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: FVVHCCGSPSNQYTERYHPSGFQ*TKRLRE
Trigger: CTCTCTGAGTCTCTTTGTGCATTGGAAACCAGAAGG...ATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR GCA 90 bp TTAGATGGAAATTATTTCCCTGCCTTACAGAGCAGGGACATAAAGCGACTTGCTACATCATCCGTGTTTTaGACTGGCTGGGCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: LDGNYFPALQSRDIKRLATSSVF*TGWAAF
Trigger: GAAAGCAGCCCAGCCAGTGCAAAACACGGATGATGT...AGCAAGTCGCTTTATGTCCCTGCTCTGTAAGGCAGGGAAATAATTTCCATCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS-3UTR GCA 90 bp GAAGAGAAGATTAGGACACAAACACACTCAGAGGAAAGACCATGTGAAGACACAACATCATCCGTGTTTTaGACTGGCTGGGCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: EEKIRTQTHSEERPCEDTTSSVF*TGWAAF
Trigger: GAAAGCAGCCCAGCCAGTGCAAAACACGGATGATGT...TGTGTCTTCACATGGTCTTTCCTCTGAGTGTGTTTGTGTCCTAATCTTCTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346477.7
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp CCATGTTCTCTCCAATCAAGGTTATGGCTTTGGACAATTCCTCACTTGTGTATCACCATAGTACGAGGCTaGAAGGGTAGTGGGCAATCT +
Preference number: 4 (lower is better)
Translates to: PCSLQSRLWLWTIPHLCITIVRG*KGSGQS
Trigger: AGATTGCCCACTACCCTTCCAGCCTCGTACTATGGT...GATACACAAGTGAGGAATTGTCCAAAGCCATAACCTTGATTGGAGAGAACATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR CCA 90 bp AAGCCAACAAGAGAGGCCTTAGAAGGGACCAACCCTGATAACACCTTGTTCTCACACGCACAGAGAGCTTaGAAGATGTATAACCGTATT +
Preference number: 4 (lower is better)
Translates to: KPTREALEGTNPDNTLFSHAQRA*KMYNRI
Trigger: AATACGGTTATACATCTTCCAAGCTCTCTGTGCGTG...TGAGAACAAGGTGTTATCAGGGTTGGTCCCTTCTAAGGCCTCTCTTGTTGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp CATGTTCTCTCCAATCAAGGTTATGGCTTTGGACAATTCCTCACTTGTGTATCTGCTGCGCTGTTTCCTTaGAAGATGCTGATGGCCACT +
Preference number: 4 (lower is better)
Translates to: HVLSNQGYGFGQFLTCVSAALFP*KMLMAT
Trigger: AGTGGCCATCAGCATCTTCCAAGGAAACAGCGCAGC...AGATACACAAGTGAGGAATTGTCCAAAGCCATAACCTTGATTGGAGAGAACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR CCA 90 bp ACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTCAAGGTTATGGCTTTaGACAATTCCTCACTTGTGT +
Preference number: 4 (lower is better)
Translates to: TRFVVHCCGSPSNQYTERSRLWL*TIPHLC
Trigger: ACACAAGTGAGGAATTGTCCAAAGCCATAACCTTGA...CCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp ATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTCTCCACTCCAATCAAGGTTATaGCTTTGGACAATTCCTCAC +
Preference number: 4 (lower is better)
Translates to: IAVAALVTNTLRGTMFSPLQSRL*LWTIPH
Trigger: GTGAGGAATTGTCCAAAGCCATAACCTTGATTGGAG...TGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000391797.3
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp AACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTATGGCTTTGGAACCAGCCCTGCCTTCTaGTTTCCAATGCACAAAGAG +
Preference number: 4 (lower is better)
Translates to: NQYTERYHVLSNQGYGFGTSPAF*FPMHKE
Trigger: CTCTTTGTGCATTGGAAACCAGAAGGCAGGGCTGGT...TCCAAAGCCATAACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp GAAGAGAAGATTAGGACACAAACACACTCAGAGGAAAGACCATGTGAAGACACAATCCGTGTTTTGCACTaGCTGGGCTGCTTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: EEKIRTQTHSEERPCEDTIRVLH*LGCFLP
Trigger: AGGAAGAAAGCAGCCCAGCCAGTGCAAAACACGGAT...TGTGTCTTCACATGGTCTTTCCTCTGAGTGTGTTTGTGTCCTAATCTTCTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346477.7
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp ACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGATGGAAACCTTATTTTaGGGAGTCGTGAAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: TRFVVHCCGSPSNQYTERMETLF*GVVKSS
Trigger: AGAACTCTTCACGACTCCCCAAAATAAGGTTTCCAT...CCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS-3UTR CCA 90 bp TCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGATGTAAGAGGAAGCTGTaGAAATGGACATGGGGTATT +
Preference number: 4 (lower is better)
Translates to: SLGLWYIAVAALVTNTLRCKRKL*KWTWGI
Trigger: AATACCCCATGTCCATTTCCACAGCTTCCTCTTACA...TCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS-3UTR CCA 90 bp CTCTTGGACAGAAGTCCTGTGGTCTGCCATATATACGAAGGTATTTATATAGTCGGGGTTTCACCATGTTaGCCAGACCAGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: LLDRSPVVCHIYEGIYIVGVSPC*PDQSRT
Trigger: AGTTCGAGACTGGTCTGGCCAACATGGTGAAACCCC...GACTATATAAATACCTTCGTATATATGGCAGACCACAGGACTTCTGTCCAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425629.8
3UTR CAA 72 bp TTTGTAAGAGGAAGCTGTGGAAATGGACATGGGGTATaGGTGACTGGTGAGGAATTGATCTGGGGAAATCTG +
Preference number: 4 (lower is better)
Translates to: FVRGSCGNGHGV*VTGEELIWGNL
Trigger: CAGATTTCCCCAGATCAATTCCTCACCAGTCACCAATACCCCATGTCCATTTCCACAGCTTCCTCTTACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS-3UTR TCA 90 bp CATGTTCTCTCCAATCAAGGTTATGGCTTTGGACAATTCCTCACTTGTGTATCTAGTACTCAGTGTCGGTaGCCTTTGGTTCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: HVLSNQGYGFGQFLTCVSSTQCR*PLVPEV
Trigger: AACCTCAGGAACCAAAGGTCACCGACACTGAGTACT...AGATACACAAGTGAGGAATTGTCCAAAGCCATAACCTTGATTGGAGAGAACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR TCA 90 bp ACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTATGGCTTTGGACGTGTATCTTGATTTCTaGGTACTCAGTGTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: TNTLRGTMFSPIKVMALDVYLDF*VLSVGD
Trigger: GTCACCGACACTGAGTACTCAGAAATCAAGATACAC...GTCCAAAGCCATAACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000391797.3
ENST00000425629.8
ENST00000436458.5
CDS-3UTR TCA 90 bp TACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTATGGCTTTGGACAATTCAGAGGAAAGACCATGTaGAGACACAAGGAGGAGACA +
Preference number: 4 (lower is better)
Translates to: YTERYHVLSNQGYGFGQFRGKTM*RHKEET
Trigger: TGTCTCCTCCTTGTGTCTTCACATGGTCTTTCCTCT...GAATTGTCCAAAGCCATAACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR TCA 90 bp TACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTATGGCTTTGGACAATTCGGTATTGGTGACTGGTaGGGAATTGATCTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: YTERYHVLSNQGYGFGQFGIGDW*GIDLGK
Trigger: TTTCCCCAGATCAATTCCTCACCAGTCACCAATACC...GAATTGTCCAAAGCCATAACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS-3UTR GCA 90 bp AACTCAGTTCTCTTGGACAGAAGTCCTGTGGTCTGCCATATATACGAAGGTATTGAAATCTCCTTCTTCTaGAGACCCTACTTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: NSVLLDRSPVVCHIYEGIEISFF*RPYLRQ
Trigger: CTGCCTCAAGTAGGGTCTGCAGAAGAAGGAGATTTC...AATACCTTCGTATATATGGCAGACCACAGGACTTCTGTCCAAGAGAACTGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346477.7
ENST00000425629.8
CDS-3UTR GCA 90 bp TACGAAAATAAAGTTCTGTGTTTATGTCACTCGGTTTGTGGTACATTGCTGTGGAGACTCAGAGAGATTTaGAGGGAGCCCAGAGGATGC +
Preference number: 4 (lower is better)
Translates to: YENKVLCLCHSVCGTLLWRLREI*REPRGC
Trigger: GCATCCTCTGGGCTCCCTGCAAATCTCTCTGAGTCT...CCACAGCAATGTACCACAAACCGAGTGACATAAACACAGAACTTTATTTTCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp AAAATAAAGTTCTGTGTTTATGTCACTCGGTTTGTGGTACATTGCTGTGGCAGCACCATAGTACGAGGCTaGAAGGGTAGTGGGCAATCT +
Preference number: 4 (lower is better)
Translates to: KIKFCVYVTRFVVHCCGSTIVRG*KGSGQS
Trigger: AGATTGCCCACTACCCTTCCAGCCTCGTACTATGGT...GCTGCCACAGCAATGTACCACAAACCGAGTGACATAAACACAGAACTTTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
CDS-3UTR CCA 90 bp TTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATCACGCACAGAGAGCTTaGAAGATGTATAACCGTATT +
Preference number: 4 (lower is better)
Translates to: FVVHCCGSPSNQYTERYHHAQRA*KMYNRI
Trigger: AATACGGTTATACATCTTCCAAGCTCTCTGTGCGTG...ATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp AACTCAGTTCTCTTGGACAGAAGTCCTGTGGTCTGCCATATATACGAAGGTATTGATGGCCACTTTCTGTaGAGCATAGGAGACATTGAG +
Preference number: 4 (lower is better)
Translates to: NSVLLDRSPVVCHIYEGIDGHFL*SIGDIE
Trigger: CTCAATGTCTCCTATGCTCCACAGAAAGTGGCCATC...AATACCTTCGTATATATGGCAGACCACAGGACTTCTGTCCAAGAGAACTGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS-3UTR CCA 90 bp CTGAAACTATACGAAAATAAAGTTCTGTGTTTATGTCACTCGGTTTGTGGTACAGCTCATCTTCTGAGATaGGGCCAGCCTCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: LKLYENKVLCLCHSVCGTAHLLR*GQPQQG
Trigger: ACCCTGCTGAGGCTGGCCCCATCTCAGAAGATGAGC...TGTACCACAAACCGAGTGACATAAACACAGAACTTTATTTTCGTATAGTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp AAGAGAAGATTAGGACACAAACACACTCAGAGGAAAGACCATGTGAAGACACAAAGTGTCGGTGACCTTTaGTTCCTGAGGTTGCACCTT +
Preference number: 4 (lower is better)
Translates to: KRRLGHKHTQRKDHVKTQSVGDL*FLRLHL
Trigger: AAGGTGCAACCTCAGGAACCAAAGGTCACCGACACT...TTGTGTCTTCACATGGTCTTTCCTCTGAGTGTGTTTGTGTCCTAATCTTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp GTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTTCAAGGTTATGGCTTTaGACAATTCCTCACTTGTGT +
Preference number: 4 (lower is better)
Translates to: VVHCCGSPSNQYTERYHVSRLWL*TIPHLC
Trigger: ACACAAGTGAGGAATTGTCCAAAGCCATAACCTTGA...AACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp TTCTGTGTTTATGTCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCTCCAATCAAGGTTATaGCTTTGGACAATTCCTCAC +
Preference number: 4 (lower is better)
Translates to: FCVYVTRFVVHCCGSPSNLQSRL*LWTIPH
Trigger: GTGAGGAATTGTCCAAAGCCATAACCTTGATTGGAG...GTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGACATAAACACAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp ATCTGGGGAAATCTGGATGGACAAGATCATGTAGAGAGCCTTGAGCAGAAAGATTGGACAGAAGTCCTGTaGTCTGCCATATATACGAAG +
Preference number: 4 (lower is better)
Translates to: IWGNLDGQDHVESLEQKDWTEVL*SAIYTK
Trigger: CTTCGTATATATGGCAGACCACAGGACTTCTGTCCA...ATCTTTCTGCTCAAGGCTCTCTACATGATCTTGTCCATCCAGATTTCCCCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS-3UTR TCA 90 bp AGGTACCATGTTCTCTCCAATCAAGGTTATGGCTTTGGACAATTCCTCACTTGTGTGTATCTTGATTTCTaGGTACTCAGTGTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: RYHVLSNQGYGFGQFLTCVYLDF*VLSVGD
Trigger: GTCACCGACACTGAGTACTCAGAAATCAAGATACAC...ACAAGTGAGGAATTGTCCAAAGCCATAACCTTGATTGGAGAGAACATGGTACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR TCA 90 bp TTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATGCTGTATGCTTTCTTTaGCCTTTCACAATAATCTGG +
Preference number: 4 (lower is better)
Translates to: FVVHCCGSPSNQYTERYHAVCFL*PFTIIW
Trigger: CCAGATTATTGTGAAAGGTCAAAGAAAGCATACAGC...ATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS-3UTR GCA 90 bp TACGAAAATAAAGTTCTGTGTTTATGTCACTCGGTTTGTGGTACATTGCTGTGGGGTGGTCTGAAACTATaGCTGTCTGGAACTGGTGCT +
Preference number: 4 (lower is better)
Translates to: YENKVLCLCHSVCGTLLWGGLKL*LSGTGA
Trigger: AGCACCAGTTCCAGACAGGCATAGTTTCAGACCACC...CCACAGCAATGTACCACAAACCGAGTGACATAAACACAGAACTTTATTTTCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR GCA 90 bp CTCCAATCAAGGTTATGGCTTTGGACAATTCCTCACTTGTGTATCTTGATTTCTGGTGGTCTGAAACTATaGCTGTCTGGAACTGGTGCT +
Preference number: 4 (lower is better)
Translates to: LQSRLWLWTIPHLCILISGGLKL*LSGTGA
Trigger: AGCACCAGTTCCAGACAGGCATAGTTTCAGACCACC...AGAAATCAAGATACACAAGTGAGGAATTGTCCAAAGCCATAACCTTGATTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR GCA 90 bp GAAGAGAAGATTAGGACACAAACACACTCAGAGGAAAGACCATGTGAAGACACACCTTCTGGTTTCCAATaGACAAAGAGACTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: EEKIRTQTHSEERPCEDTPSGFQ*TKRLRE
Trigger: CTCTCTGAGTCTCTTTGTGCATTGGAAACCAGAAGG...TGTGTCTTCACATGGTCTTTCCTCTGAGTGTGTTTGTGTCCTAATCTTCTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp ATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTCTCCACGTATTTCATCCATTTaGACTTCAACCGAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: IAVAALVTNTLRGTMFSPRISSI*TSTERS
Trigger: ACTTCTTTCGGTTGAAGTCCAAATGGATGAAATACG...TGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000391797.3
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp GTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTCCGTATTTCATCCATTTaGACTTCAACCGAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: VHCCGSPSNQYTERYHVLRISSI*TSTERS
Trigger: ACTTCTTTCGGTTGAAGTCCAAATGGATGAAATACG...GAGAACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp CCTAGTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTATGGCCACGCACAGAGAGCTTaGAAGATGTATAACCGTATT +
Preference number: 4 (lower is better)
Translates to: PSNQYTERYHVLSNQGYGHAQRA*KMYNRI
Trigger: AATACGGTTATACATCTTCCAAGCTCTCTGTGCGTG...GCCATAACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACTAGG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000391797.3
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp GCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTTCAAGGTTATGGCTTTaGACAATTCCTCACTTGTGT +
Preference number: 4 (lower is better)
Translates to: AALVTNTLRGTMFSPIKVSRLWL*TIPHLC
Trigger: ACACAAGTGAGGAATTGTCCAAAGCCATAACCTTGA...AACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000391797.3
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp CCTAGTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTATGGCCTCCAATCAAGGTTATaGCTTTGGACAATTCCTCAC +
Preference number: 4 (lower is better)
Translates to: PSNQYTERYHVLSNQGYGLQSRL*LWTIPH
Trigger: GTGAGGAATTGTCCAAAGCCATAACCTTGATTGGAG...GCCATAACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000391797.3
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp TCTCTTGGACAGAAGTCCTGTGGTCTGCCATATATACGAAGGTATTTATATAGTACCAGCCCTGCCTTCTaGTTTCCAATGCACAAAGAG +
Preference number: 4 (lower is better)
Translates to: SLGQKSCGLPYIRRYLYSTSPAF*FPMHKE
Trigger: CTCTTTGTGCATTGGAAACCAGAAGGCAGGGCTGGT...ACTATATAAATACCTTCGTATATATGGCAGACCACAGGACTTCTGTCCAAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346477.7
ENST00000425629.8
CDS-3UTR CCA 90 bp AACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTATGGCTTTGGACTGGGGAAATCTGGATaGACAAGATCATGTAGAGAG +
Preference number: 4 (lower is better)
Translates to: NQYTERYHVLSNQGYGFGLGKSG*TRSCRE
Trigger: CTCTCTACATGATCTTGTCCATCCAGATTTCCCCAG...TCCAAAGCCATAACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS-3UTR TCA 90 bp CATGTTCTCTCCAATCAAGGTTATGGCTTTGGACAATTCCTCACTTGTGTATCTTGTTTTGCAGGATTTTaGAGGCTGCGCTGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: HVLSNQGYGFGQFLTCVSCFAGF*RLRCFL
Trigger: AAGGAAACAGCGCAGCCTTCAAAATCCTGCAAAACA...AGATACACAAGTGAGGAATTGTCCAAAGCCATAACCTTGATTGGAGAGAACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR TCA 90 bp CTGAAACTATACGAAAATAAAGTTCTGTGTTTATGTCACTCGGTTTGTGGTACAGTGACCTTTGGTTCCTaGGGTTGCACCTTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: LKLYENKVLCLCHSVCGTVTFGS*GCTLWK
Trigger: CTTCCACAAGGTGCAACCTCAGGAACCAAAGGTCAC...TGTACCACAAACCGAGTGACATAAACACAGAACTTTATTTTCGTATAGTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR TCA 90 bp CATGTTCTCTCCAATCAAGGTTATGGCTTTGGACAATTCCTCACTTGTGTATCTGTGTATCTTGATTTCTaGGTACTCAGTGTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: HVLSNQGYGFGQFLTCVSVYLDF*VLSVGD
Trigger: GTCACCGACACTGAGTACTCAGAAATCAAGATACAC...AGATACACAAGTGAGGAATTGTCCAAAGCCATAACCTTGATTGGAGAGAACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR TCA 90 bp GTGTTTATGTCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATATTACATTTGATGTTTaGCCCCTCTACAAACCATCA +
Preference number: 4 (lower is better)
Translates to: VFMSLGLWYIAVAALVTNITFDV*PLYKPS
Trigger: TGATGGTTTGTAGAGGGGTCAAACATCAAATGTAAT...ATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGACATAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS-3UTR GCA 90 bp TTCTCTCCAATCAAGGTTATGGCTTTGGACAATTCCTCACTTGTGTATCTTGATGAAATCTCCTTCTTCTaGAGACCCTACTTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: FSPIKVMALDNSSLVYLDEISFF*RPYLRQ
Trigger: CTGCCTCAAGTAGGGTCTGCAGAAGAAGGAGATTTC...ATCAAGATACACAAGTGAGGAATTGTCCAAAGCCATAACCTTGATTGGAGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR GCA 90 bp CAATCAAGGTTATGGCTTTGGACAATTCCTCACTTGTGTATCTTGATTTCTGAGGAAATCTCCTTCTTCTaGAGACCCTACTTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: QSRLWLWTIPHLCILISEEISFF*RPYLRQ
Trigger: CTGCCTCAAGTAGGGTCTGCAGAAGAAGGAGATTTC...CTCAGAAATCAAGATACACAAGTGAGGAATTGTCCAAAGCCATAACCTTGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR GCA 90 bp TTGGACACAGTGTTATGGGCTAAATTGTTCCCTTCTAAAATTCATATGTTGGAAAGACTCAGAGAGATTTaGAGGGAGCCCAGAGGATGC +
Preference number: 4 (lower is better)
Translates to: LDTVLWAKLFPSKIHMLERLREI*REPRGC
Trigger: GCATCCTCTGGGCTCCCTGCAAATCTCTCTGAGTCT...TTCCAACATATGAATTTTAGAAGGGAACAATTTAGCCCATAACACTGTGTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346477.7
ENST00000425629.8
CDS-3UTR GCA 90 bp CTATACGAAAATAAAGTTCTGTGTTTATGTCACTCGGTTTGTGGTACATTGCTGGGGATTACAGGCAAGTaGCACCACACCGAGCTAATT +
Preference number: 4 (lower is better)
Translates to: LYENKVLCLCHSVCGTLLGITGK*HHTELI
Trigger: AATTAGCTCGGTGTGGTGGCACTTGCCTGTAATCCC...CAGCAATGTACCACAAACCGAGTGACATAAACACAGAACTTTATTTTCGTATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS-3UTR GCA 90 bp TTAGATGGAAATTATTTCCCTGCCTTACAGAGCAGGGACATAAAGCGACTTGCTTTCAAGCAATTCTCCTaGTTCAACCTGCAGAAGTAC +
Preference number: 4 (lower is better)
Translates to: LDGNYFPALQSRDIKRLAFKQFS*FNLQKY
Trigger: GTACTTCTGCAGGTTGAAGCAGGAGAATTGCTTGAA...AGCAAGTCGCTTTATGTCCCTGCTCTGTAAGGCAGGGAAATAATTTCCATCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS-3UTR CCA 90 bp TATGTTGGAAGTCCTAAATCTCAATATCTCAGAAGGTTACTGTATTTGGAGGGTACCATAGTACGAGGCTaGAAGGGTAGTGGGCAATCT +
Preference number: 4 (lower is better)
Translates to: YVGSPKSQYLRRLLYLEGTIVRG*KGSGQS
Trigger: AGATTGCCCACTACCCTTCCAGCCTCGTACTATGGT...ACCCTCCAAATACAGTAACCTTCTGAGATATTGAGATTTAGGACTTCCAACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346477.7
ENST00000425629.8
CDS-3UTR CCA 90 bp AGAAGATTAGGACACAAACACACTCAGAGGAAAGACCATGTGAAGACACAAGGACACGCACAGAGAGCTTaGAAGATGTATAACCGTATT +
Preference number: 4 (lower is better)
Translates to: RRLGHKHTQRKDHVKTQGHAQRA*KMYNRI
Trigger: AATACGGTTATACATCTTCCAAGCTCTCTGTGCGTG...TCCTTGTGTCTTCACATGGTCTTTCCTCTGAGTGTGTTTGTGTCCTAATCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp AAAATAAAGTTCTGTGTTTATGTCACTCGGTTTGTGGTACATTGCTGTGGCAGCTGGACAGAAGTCCTGTaGTCTGCCATATATACGAAG +
Preference number: 4 (lower is better)
Translates to: KIKFCVYVTRFVVHCCGSWTEVL*SAIYTK
Trigger: CTTCGTATATATGGCAGACCACAGGACTTCTGTCCA...GCTGCCACAGCAATGTACCACAAACCGAGTGACATAAACACAGAACTTTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346477.7
ENST00000425629.8
CDS-3UTR TCA 90 bp TTGGACACAGTGTTATGGGCTAAATTGTTCCCTTCTAAAATTCATATGTTGGAAAGTACTCAGTGTCGGTaGCCTTTGGTTCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: LDTVLWAKLFPSKIHMLESTQCR*PLVPEV
Trigger: AACCTCAGGAACCAAAGGTCACCGACACTGAGTACT...TTCCAACATATGAATTTTAGAAGGGAACAATTTAGCCCATAACACTGTGTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346477.7
ENST00000425629.8
CDS-3UTR TCA 90 bp CTATACGAAAATAAAGTTCTGTGTTTATGTCACTCGGTTTGTGGTACATTGCTGAGAGGAAAGACCATGTaGAGACACAAGGAGGAGACA +
Preference number: 4 (lower is better)
Translates to: LYENKVLCLCHSVCGTLLRGKTM*RHKEET
Trigger: TGTCTCCTCCTTGTGTCTTCACATGGTCTTTCCTCT...CAGCAATGTACCACAAACCGAGTGACATAAACACAGAACTTTATTTTCGTATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR GCA 90 bp CTATACGAAAATAAAGTTCTGTGTTTATGTCACTCGGTTTGTGGTACATTGCTGTTGCACTGGCTGGGCTaGTTTCTTCCTTCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: LYENKVLCLCHSVCGTLLLHWLG*FLPSSL
Trigger: AAGACTAGAAGGAAGAAAGCAGCCCAGCCAGTGCAA...CAGCAATGTACCACAAACCGAGTGACATAAACACAGAACTTTATTTTCGTATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346477.7
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp ACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTATGGCTTTGGACCGTATTTCATCCATTTaGACTTCAACCGAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: TNTLRGTMFSPIKVMALDRISSI*TSTERS
Trigger: ACTTCTTTCGGTTGAAGTCCAAATGGATGAAATACG...GTCCAAAGCCATAACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000391797.3
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp ATCTGGGGAAATCTGGATGGACAAGATCATGTAGAGAGCCTTGAGCAGAAAGATCGTATTTCATCCATTTaGACTTCAACCGAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: IWGNLDGQDHVESLEQKDRISSI*TSTERS
Trigger: ACTTCTTTCGGTTGAAGTCCAAATGGATGAAATACG...ATCTTTCTGCTCAAGGCTCTCTACATGATCTTGTCCATCCAGATTTCCCCAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS-3UTR TCA 90 bp TACGAAAATAAAGTTCTGTGTTTATGTCACTCGGTTTGTGGTACATTGCTGTGGTTGTTTTGCTTTTTCTaGGTTGGAGTCTCGCTCTGT +
Preference number: 4 (lower is better)
Translates to: YENKVLCLCHSVCGTLLWLFCFF*VGVSLC
Trigger: ACAGAGCGAGACTCCAACTCAGAAAAAGCAAAACAA...CCACAGCAATGTACCACAAACCGAGTGACATAAACACAGAACTTTATTTTCGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS-3UTR CCA 90 bp AAAATAAAGTTCTGTGTTTATGTCACTCGGTTTGTGGTACATTGCTGTGGCAGCTCAAGGTTATGGCTTTaGACAATTCCTCACTTGTGT +
Preference number: 4 (lower is better)
Translates to: KIKFCVYVTRFVVHCCGSSRLWL*TIPHLC
Trigger: ACACAAGTGAGGAATTGTCCAAAGCCATAACCTTGA...GCTGCCACAGCAATGTACCACAAACCGAGTGACATAAACACAGAACTTTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp TCTCTCCAATCAAGGTTATGGCTTTGGACAATTCCTCACTTGTGTATCTTGATTCTCCAATCAAGGTTATaGCTTTGGACAATTCCTCAC +
Preference number: 4 (lower is better)
Translates to: SLQSRLWLWTIPHLCILILQSRL*LWTIPH
Trigger: GTGAGGAATTGTCCAAAGCCATAACCTTGATTGGAG...AATCAAGATACACAAGTGAGGAATTGTCCAAAGCCATAACCTTGATTGGAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR GCA 90 bp TTGGACACAGTGTTATGGGCTAAATTGTTCCCTTCTAAAATTCATATGTTGGAACCTTCTGGTTTCCAATaGACAAAGAGACTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: LDTVLWAKLFPSKIHMLEPSGFQ*TKRLRE
Trigger: CTCTCTGAGTCTCTTTGTGCATTGGAAACCAGAAGG...TTCCAACATATGAATTTTAGAAGGGAACAATTTAGCCCATAACACTGTGTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346477.7
ENST00000425629.8
CDS-3UTR CCA 90 bp AAAATAAAGTTCTGTGTTTATGTCACTCGGTTTGTGGTACATTGCTGTGGCAGCCGTATTTCATCCATTTaGACTTCAACCGAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: KIKFCVYVTRFVVHCCGSRISSI*TSTERS
Trigger: ACTTCTTTCGGTTGAAGTCCAAATGGATGAAATACG...GCTGCCACAGCAATGTACCACAAACCGAGTGACATAAACACAGAACTTTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp CTATACGAAAATAAAGTTCTGTGTTTATGTCACTCGGTTTGTGGTACATTGCTGCACGCACAGAGAGCTTaGAAGATGTATAACCGTATT +
Preference number: 4 (lower is better)
Translates to: LYENKVLCLCHSVCGTLLHAQRA*KMYNRI
Trigger: AATACGGTTATACATCTTCCAAGCTCTCTGTGCGTG...CAGCAATGTACCACAAACCGAGTGACATAAACACAGAACTTTATTTTCGTATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CCA 90 bp CTCCAATCAAGGTTATGGCTTTGGACAATTCCTCACTTGTGTATCTTGATTTCTTCAAGGTTATGGCTTTaGACAATTCCTCACTTGTGT +
Preference number: 4 (lower is better)
Translates to: LQSRLWLWTIPHLCILISSRLWL*TIPHLC
Trigger: ACACAAGTGAGGAATTGTCCAAAGCCATAACCTTGA...AGAAATCAAGATACACAAGTGAGGAATTGTCCAAAGCCATAACCTTGATTGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR CCA 90 bp GAAGAGAAGATTAGGACACAAACACACTCAGAGGAAAGACCATGTGAAGACACACTCAAAAATCTAATCTaGGATCACTTTCCTAATACC +
Preference number: 4 (lower is better)
Translates to: EEKIRTQTHSEERPCEDTLKNLI*DHFPNT
Trigger: GGTATTAGGAAAGTGATCCCAGATTAGATTTTTGAG...TGTGTCTTCACATGGTCTTTCCTCTGAGTGTGTTTGTGTCCTAATCTTCTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS-3UTR TCA 90 bp ACACAGTGTTATGGGCTAAATTGTTCCCTTCTAAAATTCATATGTTGGAAGTCCAATATACAGACTTTATaGAAACCTTTGTGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: TQCYGLNCSLLKFICWKSNIQTL*KPLCQG
Trigger: GCCCTGACACAAAGGTTTTCATAAAGTCTGTATATT...GGACTTCCAACATATGAATTTTAGAAGGGAACAATTTAGCCCATAACACTGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS GCA 90 bp CATCTTCTGAGATGGGGCCAGCCTCAGCAGGGTGGTCTGAAACTATaGCTGTCTGGAACTGGTGCTGATGACCCCTGGAGCCTGAGACCA +
Preference number: 5 (lower is better)
Translates to: HLLRWGQPQQGGLKL*LSGTGADDPWSLRP
Trigger: TGGTCTCAGGCTCCAGGGGTCATCAGCACCAGTTCCAGACAGGCATAGTTTCAGACCACCCTGCTGAGGCTGGCCCCATCTCAGAAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346477.7
ENST00000425629.8
ENST00000436458.5
ENST00000474054.1
CDS-3UTR CAA 90 bp CCTTTGGTTCCTGAGGTTGCACCTTGTGGAAGTGTAGGACAGCGTAGTGGAGCTGAGACTCAGAGAGATTaGCAGGGAGCCCAGAGGATG +
Preference number: 5 (lower is better)
Translates to: PLVPEVAPCGSVGQRSGAETQRD*QGAQRM
Trigger: CATCCTCTGGGCTCCCTGCAAATCTCTCTGAGTCTC...AGCTCCACTACGCTGTCCTACACTTCCACAAGGTGCAACCTCAGGAACCAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS GCA 90 bp CATCTTCTGAGATGGGGCCAGCCTCAGCAGGGTGGTCTGAAACTATaGCTGTCTGGAACTGGTGCTGATGACCAATGCACAAAGAGACTC +
Preference number: 5 (lower is better)
Translates to: HLLRWGQPQQGGLKL*LSGTGADDQCTKRL
Trigger: GAGTCTCTTTGTGCATTGGTCATCAGCACCAGTTCCAGACAGGCATAGTTTCAGACCACCCTGCTGAGGCTGGCCCCATCTCAGAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343300.8
ENST00000391797.3
CDS GCA 90 bp CATCTTCTGAGATGGGGCCAGCCTCAGCAGGGTGGTCTGAAACTATaGCTGTCTGGAACTGGTGCTGATGACCCTGAAGATGAAGCAAAC +
Preference number: 5 (lower is better)
Translates to: HLLRWGQPQQGGLKL*LSGTGADDPEDEAN
Trigger: GTTTGCTTCATCTTCAGGGTCATCAGCACCAGTTCCAGACAGGCATAGTTTCAGACCACCCTGCTGAGGCTGGCCCCATCTCAGAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359982.8
CDS-3UTR CAA 90 bp ACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGGAGCAGACGGAAACTTaGAGACCCAGAGACCTGCCC +
Preference number: 5 (lower is better)
Translates to: TRFVVHCCGSPSNQYTEREQTET*RPRDLP
Trigger: GGGCAGGTCTCTGGGTCTCAAAGTTTCCGTCTGCTC...CCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343300.8
CDS-3UTR CAA 90 bp AAGACACAAGGAGGAGACAGCCATCTACAAGCCAACAAGAGAGGCCTTAGAAGGGGCTGCGCTGTTTCCTaGGAAGATGCTGATGGCCAC +
Preference number: 5 (lower is better)
Translates to: KTQGGDSHLQANKRGLRRGCAVS*EDADGH
Trigger: GTGGCCATCAGCATCTTCCAAGGAAACAGCGCAGCC...CCTTCTAAGGCCTCTCTTGTTGGCTTGTAGATGGCTGTCTCCTCCTTGTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000425629.8
CDS-3UTR CAA 90 bp CTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGTGAGACTCAGAGAGATTaGCAGGGAGCCCAGAGGATG +
Preference number: 5 (lower is better)
Translates to: LGLWYIAVAALVTNTLRGETQRD*QGAQRM
Trigger: CATCCTCTGGGCTCCCTGCAAATCTCTCTGAGTCTC...ACCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CAA 90 bp CACAAGGAGGAGACAGCCATCTACAAGCCAACAAGAGAGGCCTTAGAAGGGACCGTGTTTTGCAGGATTTaGAAGGCTGCGCTGTTTCCT +
Preference number: 5 (lower is better)
Translates to: HKEETAIYKPTREALEGTVFCRI*KAALFP
Trigger: AGGAAACAGCGCAGCCTTCAAAATCCTGCAAAACAC...GGTCCCTTCTAAGGCCTCTCTTGTTGGCTTGTAGATGGCTGTCTCCTCCTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000425629.8
CDS-3UTR CAA 90 bp ATCTACAAGCCAACAAGAGAGGCCTTAGAAGGGACCAACCCTGATAACACCTTGGAGGGACGAGGTGTTTaGCAGGATTTTGAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: IYKPTREALEGTNPDNTLEGRGV*QDFEGC
Trigger: GCAGCCTTCAAAATCCTGCAAAACACCTCGTCCCTC...CAAGGTGTTATCAGGGTTGGTCCCTTCTAAGGCCTCTCTTGTTGGCTTGTAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000425629.8
CDS-3UTR CAA 90 bp TACAAGCCAACAAGAGAGGCCTTAGAAGGGACCAACCCTGATAACACCTTGTTCGAGGGACGAGGTGTTTaGCAGGATTTTGAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: YKPTREALEGTNPDNTLFEGRGV*QDFEGC
Trigger: GCAGCCTTCAAAATCCTGCAAAACACCTCGTCCCTC...GAACAAGGTGTTATCAGGGTTGGTCCCTTCTAAGGCCTCTCTTGTTGGCTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000425629.8
CDS-3UTR CAA 90 bp TATGTCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGACTCAGAGAGATTaGCAGGGAGCCCAGAGGATG +
Preference number: 5 (lower is better)
Translates to: YVTRFVVHCCGSPSNQYTETQRD*QGAQRM
Trigger: CATCCTCTGGGCTCCCTGCAAATCTCTCTGAGTCTC...AGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS GCA 90 bp GACCATGACGGGGTTCACATCATCCGTGTTTTGCACTGGCTGGGCTaGTTTCTTCCTTCTAGTCTTCACTCTGAAGATGAAGCAAACACA +
Preference number: 5 (lower is better)
Translates to: DHDGVHIIRVLHWLG*FLPSSLHSEDEANT
Trigger: TGTGTTTGCTTCATCTTCAGAGTGAAGACTAGAAGGAAGAAAGCAGCCCAGCCAGTGCAAAACACGGATGATGTGAACCCCGTCATGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346477.7
ENST00000425629.8
ENST00000436458.5
ENST00000474054.1
CDS-3UTR CAA 90 bp AACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTATGGCTTTGGAGGCTGCGCTGTTTCCTaGGAAGATGCTGATGGCCAC +
Preference number: 5 (lower is better)
Translates to: NQYTERYHVLSNQGYGFGGCAVS*EDADGH
Trigger: GTGGCCATCAGCATCTTCCAAGGAAACAGCGCAGCC...TCCAAAGCCATAACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
ENST00000425629.8
CDS-3UTR CAA 90 bp GTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTATGGCTTTGGGCTGCGCTGTTTCCTaGGAAGATGCTGATGGCCAC +
Preference number: 5 (lower is better)
Translates to: VTNTLRGTMFSPIKVMALGCAVS*EDADGH
Trigger: GTGGCCATCAGCATCTTCCAAGGAAACAGCGCAGCC...CAAAGCCATAACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
ENST00000425629.8
CDS-3UTR CAA 90 bp GTCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGGTGTTTTGCAGGATTTaGAAGGCTGCGCTGTTTCCT +
Preference number: 5 (lower is better)
Translates to: VTRFVVHCCGSPSNQYTEVFCRI*KAALFP
Trigger: AGGAAACAGCGCAGCCTTCAAAATCCTGCAAAACAC...CTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000425629.8
CDS-3UTR CAA 90 bp GTGTTTATGTCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATGAGGGACGAGGTGTTTaGCAGGATTTTGAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: VFMSLGLWYIAVAALVTNEGRGV*QDFEGC
Trigger: GCAGCCTTCAAAATCCTGCAAAACACCTCGTCCCTC...ATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGACATAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000425629.8
CDS-3UTR CAA 90 bp CCTTGTGGAAGTGTAGGACAGCGTAGTGGAGCTCCTGCTCATCTTCTGAGATGGATCAAGGTTATGGCTTaGGACAATTCCTCACTTGTG +
Preference number: 5 (lower is better)
Translates to: PCGSVGQRSGAPAHLLRWIKVMA*DNSSLV
Trigger: CACAAGTGAGGAATTGTCCAAAGCCATAACCTTGAT...CCATCTCAGAAGATGAGCAGGAGCTCCACTACGCTGTCCTACACTTCCACAAGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR CAA 90 bp GTTTATGTCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACCACATCATCCGTGTTTaGCACTGGCTGGGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: VYVTRFVVHCCGSPSNQYHIIRV*HWLGCF
Trigger: AAAGCAGCCCAGCCAGTGCAAAACACGGATGATGTG...GTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGACATAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346477.7
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CAA 90 bp ACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGAGGGTGACTGGTGAGGAATaGATCTGGGGAAATCTGGAT +
Preference number: 5 (lower is better)
Translates to: TRFVVHCCGSPSNQYTERVTGEE*IWGNLD
Trigger: ATCCAGATTTCCCCAGATCAATTCCTCACCAGTCAC...CCTCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS-3UTR CAA 90 bp CATGTTCTCTCCAATCAAGGTTATGGCTTTGGACAATTCCTCACTTGTGTATCTGGCTGCGCTGTTTCCTaGGAAGATGCTGATGGCCAC +
Preference number: 5 (lower is better)
Translates to: HVLSNQGYGFGQFLTCVSGCAVS*EDADGH
Trigger: GTGGCCATCAGCATCTTCCAAGGAAACAGCGCAGCC...AGATACACAAGTGAGGAATTGTCCAAAGCCATAACCTTGATTGGAGAGAACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR CAA 90 bp AAGCCAACAAGAGAGGCCTTAGAAGGGACCAACCCTGATAACACCTTGTTCTCAGTGTTTTGCAGGATTTaGAAGGCTGCGCTGTTTCCT +
Preference number: 5 (lower is better)
Translates to: KPTREALEGTNPDNTLFSVFCRI*KAALFP
Trigger: AGGAAACAGCGCAGCCTTCAAAATCCTGCAAAACAC...TGAGAACAAGGTGTTATCAGGGTTGGTCCCTTCTAAGGCCTCTCTTGTTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000425629.8
CDS-3UTR CAA 90 bp AACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTATGGCTTTGGAGAGACTCAGAGAGATTaGCAGGGAGCCCAGAGGATG +
Preference number: 5 (lower is better)
Translates to: NQYTERYHVLSNQGYGFGETQRD*QGAQRM
Trigger: CATCCTCTGGGCTCCCTGCAAATCTCTCTGAGTCTC...TCCAAAGCCATAACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000391797.3
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CAA 90 bp AACTCAGTTCTCTTGGACAGAAGTCCTGTGGTCTGCCATATATACGAAGGTATTGAGACTCAGAGAGATTaGCAGGGAGCCCAGAGGATG +
Preference number: 5 (lower is better)
Translates to: NSVLLDRSPVVCHIYEGIETQRD*QGAQRM
Trigger: CATCCTCTGGGCTCCCTGCAAATCTCTCTGAGTCTC...AATACCTTCGTATATATGGCAGACCACAGGACTTCTGTCCAAGAGAACTGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346477.7
ENST00000425629.8
CDS-3UTR CAA 90 bp GAGAAGATTAGGACACAAACACACTCAGAGGAAAGACCATGTGAAGACACAAGGCACATCATCCGTGTTTaGCACTGGCTGGGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: EKIRTQTHSEERPCEDTRHIIRV*HWLGCF
Trigger: AAAGCAGCCCAGCCAGTGCAAAACACGGATGATGTG...CCTTGTGTCTTCACATGGTCTTTCCTCTGAGTGTGTTTGTGTCCTAATCTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346477.7
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CAA 90 bp GTGGCAGCCCTAGTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGTTGAACTCAGTTCTCTaGGACAGAAGTCCTGTGGTC +
Preference number: 5 (lower is better)
Translates to: VAALVTNTLRGTMFSPIKLNSVL*DRSPVV
Trigger: GACCACAGGACTTCTGTCCAAGAGAACTGAGTTCAA...CTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACTAGGGCTGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346477.7
ENST00000425629.8
CDS-3UTR CAA 90 bp TCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGATTGAACTCAGTTCTCTaGGACAGAAGTCCTGTGGTC +
Preference number: 5 (lower is better)
Translates to: SLGLWYIAVAALVTNTLRLNSVL*DRSPVV
Trigger: GACCACAGGACTTCTGTCCAAGAGAACTGAGTTCAA...TCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346477.7
ENST00000425629.8
CDS-3UTR CAA 90 bp AAGACACAAGGAGGAGACAGCCATCTACAAGCCAACAAGAGAGGCCTTAGAAGGCCGTATTTCATCCATTaGGACTTCAACCGAAAGAAG +
Preference number: 5 (lower is better)
Translates to: KTQGGDSHLQANKRGLRRPYFIH*DFNRKK
Trigger: CTTCTTTCGGTTGAAGTCCAAATGGATGAAATACGG...CCTTCTAAGGCCTCTCTTGTTGGCTTGTAGATGGCTGTCTCCTCCTTGTGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CAA 90 bp GTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTATGGCTTTGGAGGGACGAGGTGTTTaGCAGGATTTTGAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: VTNTLRGTMFSPIKVMALEGRGV*QDFEGC
Trigger: GCAGCCTTCAAAATCCTGCAAAACACCTCGTCCCTC...CAAAGCCATAACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
ENST00000425629.8
CDS-3UTR CAA 90 bp AAAATAAAGTTCTGTGTTTATGTCACTCGGTTTGTGGTACATTGCTGTGGCAGCGAGACTCAGAGAGATTaGCAGGGAGCCCAGAGGATG +
Preference number: 5 (lower is better)
Translates to: KIKFCVYVTRFVVHCCGSETQRD*QGAQRM
Trigger: CATCCTCTGGGCTCCCTGCAAATCTCTCTGAGTCTC...GCTGCCACAGCAATGTACCACAAACCGAGTGACATAAACACAGAACTTTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CAA 90 bp AATTCTCCTGCTTCAACCTGCAGAAGTACCTGGGATTACAGGCAAGTGCCACCAATCAAGGTTATGGCTTaGGACAATTCCTCACTTGTG +
Preference number: 5 (lower is better)
Translates to: NSPASTCRSTWDYRQVPPIKVMA*DNSSLV
Trigger: CACAAGTGAGGAATTGTCCAAAGCCATAACCTTGAT...TGGTGGCACTTGCCTGTAATCCCAGGTACTTCTGCAGGTTGAAGCAGGAGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS-3UTR CAA 90 bp AAGATTAGGACACAAACACACTCAGAGGAAAGACCATGTGAAGACACAAGGAGGGAGGGACGAGGTGTTTaGCAGGATTTTGAAGGAGGA +
Preference number: 5 (lower is better)
Translates to: KIRTQTHSEERPCEDTRREGRGV*QDFEGG
Trigger: TCCTCCTTCAAAATCCTGCAAAACACCTCGTCCCTC...CCTCCTTGTGTCTTCACATGGTCTTTCCTCTGAGTGTGTTTGTGTCCTAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346477.7
ENST00000436458.5
CDS-3UTR CAA 90 bp AACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTATGGCTTTGGACACATCATCCGTGTTTaGCACTGGCTGGGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: NQYTERYHVLSNQGYGFGHIIRV*HWLGCF
Trigger: AAAGCAGCCCAGCCAGTGCAAAACACGGATGATGTG...TCCAAAGCCATAACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346477.7
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CAA 90 bp TCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACACTGAGACCGTATTTCATCCATTaGGACTTCAACCGAAAGAAG +
Preference number: 5 (lower is better)
Translates to: SLGLWYIAVAALVTNTLRPYFIH*DFNRKK
Trigger: CTTCTTTCGGTTGAAGTCCAAATGGATGAAATACGG...TCTCAGTGTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CAA 90 bp TACAAGCCAACAAGAGAGGCCTTAGAAGGGACCAACCCTGATAACACCTTGTTCATCAAGGTTATGGCTTaGGACAATTCCTCACTTGTG +
Preference number: 5 (lower is better)
Translates to: YKPTREALEGTNPDNTLFIKVMA*DNSSLV
Trigger: CACAAGTGAGGAATTGTCCAAAGCCATAACCTTGAT...GAACAAGGTGTTATCAGGGTTGGTCCCTTCTAAGGCCTCTCTTGTTGGCTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CAA 90 bp GAAGAGAAGATTAGGACACAAACACACTCAGAGGAAAGACCATGTGAAGACACAGAGGGACGAGGTGTTTaGCAGGATTTTGAAGGAGGA +
Preference number: 5 (lower is better)
Translates to: EEKIRTQTHSEERPCEDTEGRGV*QDFEGG
Trigger: TCCTCCTTCAAAATCCTGCAAAACACCTCGTCCCTC...TGTGTCTTCACATGGTCTTTCCTCTGAGTGTGTTTGTGTCCTAATCTTCTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346477.7
ENST00000436458.5
CDS-3UTR CAA 90 bp GTTTATGTCACTCGGTTTGTGGTACATTGCTGTGGCAGCCCTAGTAACCAATACCCGTATTTCATCCATTaGGACTTCAACCGAAAGAAG +
Preference number: 5 (lower is better)
Translates to: VYVTRFVVHCCGSPSNQYPYFIH*DFNRKK
Trigger: CTTCTTTCGGTTGAAGTCCAAATGGATGAAATACGG...GTATTGGTTACTAGGGCTGCCACAGCAATGTACCACAAACCGAGTGACATAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CAA 90 bp AACTCAGTTCTCTTGGACAGAAGTCCTGTGGTCTGCCATATATACGAAGGTATTAATGGACATGGGGTATaGGTGACTGGTGAGGAATTG +
Preference number: 5 (lower is better)
Translates to: NSVLLDRSPVVCHIYEGINGHGV*VTGEEL
Trigger: CAATTCCTCACCAGTCACCAATACCCCATGTCCATT...AATACCTTCGTATATATGGCAGACCACAGGACTTCTGTCCAAGAGAACTGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS-3UTR CAA 90 bp CATGTTCTCTCCAATCAAGGTTATGGCTTTGGACAATTCCTCACTTGTGTATCTGTGTTTTGCAGGATTTaGAAGGCTGCGCTGTTTCCT +
Preference number: 5 (lower is better)
Translates to: HVLSNQGYGFGQFLTCVSVFCRI*KAALFP
Trigger: AGGAAACAGCGCAGCCTTCAAAATCCTGCAAAACAC...AGATACACAAGTGAGGAATTGTCCAAAGCCATAACCTTGATTGGAGAGAACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR CAA 90 bp CTGAGAGGTACCATGTTCTCTCCAATCAAGGTTATGGCTTTGGACAATTCCTCAATCAAGGTTATGGCTTaGGACAATTCCTCACTTGTG +
Preference number: 5 (lower is better)
Translates to: LRGTMFSPIKVMALDNSSIKVMA*DNSSLV
Trigger: CACAAGTGAGGAATTGTCCAAAGCCATAACCTTGAT...TGAGGAATTGTCCAAAGCCATAACCTTGATTGGAGAGAACATGGTACCTCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR CAA 90 bp GGATTTGTAAGAGGAAGCTGTGGAAATGGACATGGGGTATTGGTGACTGGTGAGAGCTGTATGCTTTCTTaGACCTTTCACAATAATCTG +
Preference number: 5 (lower is better)
Translates to: GFVRGSCGNGHGVLVTGESCMLS*TFHNNL
Trigger: CAGATTATTGTGAAAGGTCAAAGAAAGCATACAGCT...CTCACCAGTCACCAATACCCCATGTCCATTTCCACAGCTTCCTCTTACAAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS-3UTR CAA 90 bp CCATGTTCTCTCCAATCAAGGTTATGGCTTTGGACAATTCCTCACTTGTGTATCCCGTATTTCATCCATTaGGACTTCAACCGAAAGAAG +
Preference number: 5 (lower is better)
Translates to: PCSLQSRLWLWTIPHLCIPYFIH*DFNRKK
Trigger: CTTCTTTCGGTTGAAGTCCAAATGGATGAAATACGG...GATACACAAGTGAGGAATTGTCCAAAGCCATAACCTTGATTGGAGAGAACATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343300.8
ENST00000359982.8
ENST00000391797.3
CDS-3UTR CAA 90 bp GTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTATGGCTTTGATCAAGGTTATGGCTTaGGACAATTCCTCACTTGTG +
Preference number: 5 (lower is better)
Translates to: VTNTLRGTMFSPIKVMALIKVMA*DNSSLV
Trigger: CACAAGTGAGGAATTGTCCAAAGCCATAACCTTGAT...CAAAGCCATAACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000391797.3
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CAA 90 bp AGTAACCAATACACTGAGAGGTACCATGTTCTCTCCAATCAAGGTTATGGCTTTATCAAGGTTATGGCTTaGGACAATTCCTCACTTGTG +
Preference number: 5 (lower is better)
Translates to: SNQYTERYHVLSNQGYGFIKVMA*DNSSLV
Trigger: CACAAGTGAGGAATTGTCCAAAGCCATAACCTTGAT...AAAGCCATAACCTTGATTGGAGAGAACATGGTACCTCTCAGTGTATTGGTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000391797.3
ENST00000425629.8
ENST00000436458.5
CDS-3UTR CAA 90 bp TATGTTGGAAGTCCTAAATCTCAATATCTCAGAAGGTTACTGTATTTGGAGGGTGATGGAAACCTTATTTaGGGGAGTCGTGAAGAGTTC +
Preference number: 5 (lower is better)
Translates to: YVGSPKSQYLRRLLYLEGDGNLI*GSREEF
Trigger: GAACTCTTCACGACTCCCCAAAATAAGGTTTCCATC...ACCCTCCAAATACAGTAACCTTCTGAGATATTGAGATTTAGGACTTCCAACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425629.8
CDS GCA 72 bp AGATGGGGCCAGCCTCAGCAGGGTGGTCTGAAACTATaGCTGTCTGGAACTGGTGCTGATGACCCCTGGAGC +
Preference number: 6 (lower is better)
Translates to: RWGQPQQGGLKL*LSGTGADDPWS
Trigger: GCTCCAGGGGTCATCAGCACCAGTTCCAGACAGGCATAGTTTCAGACCACCCTGCTGAGGCTGGCCCCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346477.7
ENST00000425629.8
ENST00000436458.5
ENST00000474054.1
CDS GCA 72 bp AGATGGGGCCAGCCTCAGCAGGGTGGTCTGAAACTATaGCTGTCTGGAACTGGTGCTGATGACCAATGCACA +
Preference number: 6 (lower is better)
Translates to: RWGQPQQGGLKL*LSGTGADDQCT
Trigger: TGTGCATTGGTCATCAGCACCAGTTCCAGACAGGCATAGTTTCAGACCACCCTGCTGAGGCTGGCCCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343300.8
ENST00000391797.3
CDS GCA 72 bp AGATGGGGCCAGCCTCAGCAGGGTGGTCTGAAACTATaGCTGTCTGGAACTGGTGCTGATGACCCTGAAGAT +
Preference number: 6 (lower is better)
Translates to: RWGQPQQGGLKL*LSGTGADDPED
Trigger: ATCTTCAGGGTCATCAGCACCAGTTCCAGACAGGCATAGTTTCAGACCACCCTGCTGAGGCTGGCCCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359982.8
CDS CCA 72 bp TTCCAGGAACCAGTAGCCATAACCATAGTACGAGGCTaGAAGGGTAGTGGGCAATCTGCAGGGTACGAGGAC +
Preference number: 6 (lower is better)
Translates to: FQEPVAITIVRG*KGSGQSAGYED
Trigger: GTCCTCGTACCCTGCAGATTGCCCACTACCCTTCCAGCCTCGTACTATGGTTATGGCTACTGGTTCCTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343300.8
ENST00000346477.7
ENST00000359982.8
ENST00000391797.3
ENST00000425629.8
ENST00000489837.1
CDS GCA 72 bp GGGGTTCACATCATCCGTGTTTTGCACTGGCTGGGCTaGTTTCTTCCTTCTAGTCTTCACTCTGAAGATGAA +
Preference number: 6 (lower is better)
Translates to: GVHIIRVLHWLG*FLPSSLHSEDE
Trigger: TTCATCTTCAGAGTGAAGACTAGAAGGAAGAAAGCAGCCCAGCCAGTGCAAAACACGGATGATGTGAACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346477.7
ENST00000425629.8
ENST00000436458.5
ENST00000474054.1