RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SIGLEC10 (Homo sapiens)

Ensembl gene IDs: ENSG00000142512

Ensembl transcript IDs: ENST00000339313.10, ENST00000353836.9, ENST00000357375.4, ENST00000436984.6, ENST00000439889.6, ENST00000441969.7, ENST00000442846.7, ENST00000525998.5

Found 306 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACCTGTATCTTGTACGGACCTCCTGTCTCATCCTGTGACTTAGAATaGCTCCACTGTCTGAGAATGCAGCCCAGTAGGTCTCAGCCTCAT +
Preference number: 1 (lower is better)
Translates to: TCILYGPPVSSCDLE*LHCLRMQPSRSQPH
Trigger: ATGAGGCTGAGACCTACTGGGCTGCATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCCGTACAAGATACAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR TCA 90 bp GGATTATTCATTCCTCCCCCTTTTGGGACATATCGGGTAACTTCCTaGTGTTGCCATGGCATTTGTAAACTGTCATGGTGCTGTCAGGAG +
Preference number: 1 (lower is better)
Translates to: GLFIPPPFGTYRVTS*CCHGICKLSWCCQE
Trigger: CTCCTGACAGCACCATGACAGTTTACAAATGCCATGGCAACATCAGGAAGTTACCCGATATGTCCCAAAAGGGGGAGGAATGAATAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR CCA 90 bp CCAGAGGTCACTCTCGTGGCCAACTTGGTTTTGGTGGGATTTGGTTaGCTTCTTTACTGCAATCTGTTTTATCAGCAAAGTCTTTATGAC +
Preference number: 1 (lower is better)
Translates to: PEVTLVANLVLVGFG*LLYCNLFYQQSLYD
Trigger: GTCATAAAGACTTTGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAGTTGGCCACGAGAGTGACCTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR CCA 90 bp ACGACCAGAGGTCACTCTCGTGGCCAACTTGGTTTTGGTGGGATTTaGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCAAAGTCTTTA +
Preference number: 1 (lower is better)
Translates to: TTRGHSRGQLGFGGI*LASLLQSVLSAKSL
Trigger: TAAAGACTTTGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAGTTGGCCACGAGAGTGACCTCTGGTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR-3UTR GCA 90 bp TACGGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGGGAGTCTCGCTTTGTTaGCCAGGCTGGCGTGCAATG +
Preference number: 2 (lower is better)
Translates to: YGPPVSSCDLECLHCLRMGVSLC*PGWRAM
Trigger: CATTGCACGCCAGCCTGGGCAACAAAGCGAGACTCC...CATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCCGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR-3UTR CCA 90 bp GGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGCAGCAGGCTGGCGTGCAATaGTGTGATCTTGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: GPPVSSCDLECLHCLRMQQAGVQ*CDLGSL
Trigger: CAGTGAGCCAAGATCACACCATTGCACGCCAGCCTG...CTGCATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR-3UTR GCA 90 bp GCAGCGCCTAGAGCTGCTGGTTGCCCACTTTTATGGTTATTTCTTGCTTATTTGGGAGTCTCGCTTTGTTaGCCAGGCTGGCGTGCAATG +
Preference number: 2 (lower is better)
Translates to: AAPRAAGCPLLWLFLAYLGVSLC*PGWRAM
Trigger: CATTGCACGCCAGCCTGGGCAACAAAGCGAGACTCC...CAAATAAGCAAGAAATAACCATAAAAGTGGGCAACCAGCAGCTCTAGGCGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR-3UTR TCA 90 bp GGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGCAGTCTGGTTTAAATGTCTaGCAGCTGGGACTACAGGCA +
Preference number: 2 (lower is better)
Translates to: GPPVSSCDLECLHCLRMQSGLNV*QLGLQA
Trigger: TGCCTGTAGTCCCAGCTGTCAGACATTTAAACCAGA...CTGCATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR-3UTR GCA 90 bp GCAGCGCCTAGAGCTGCTGGTTGCCCACTTTTATGGTTATTTCTTGCTTATTTGTTGCCCAGGCTGGCGTaGAATGGTGTGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: AAPRAAGCPLLWLFLAYLLPRLA*NGVILA
Trigger: AGCCAAGATCACACCATTGCACGCCAGCCTGGGCAA...CAAATAAGCAAGAAATAACCATAAAAGTGGGCAACCAGCAGCTCTAGGCGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR-3UTR CCA 90 bp GCAGCGCCTAGAGCTGCTGGTTGCCCACTTTTATGGTTATTTCTTGCTTATTTGCAGGCTGGCGTGCAATaGTGTGATCTTGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: AAPRAAGCPLLWLFLAYLQAGVQ*CDLGSL
Trigger: CAGTGAGCCAAGATCACACCATTGCACGCCAGCCTG...CAAATAAGCAAGAAATAACCATAAAAGTGGGCAACCAGCAGCTCTAGGCGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR-3UTR GCA 90 bp GGCCAACTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTAGGAGTCTCGCTTTGTTaGCCAGGCTGGCGTGCAATG +
Preference number: 2 (lower is better)
Translates to: GQLGFGGIWLASLLQSVLGVSLC*PGWRAM
Trigger: CATTGCACGCCAGCCTGGGCAACAAAGCGAGACTCC...TAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAGTTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR-3UTR TCA 90 bp AAAGGAACAAAAGAATGGCTACTCCATAGACAAGAGCAGCGCCTAGAGCTGCTGTCTGGTTTAAATGTCTaGCAGCTGGGACTACAGGCA +
Preference number: 2 (lower is better)
Translates to: KGTKEWLLHRQEQRLELLSGLNV*QLGLQA
Trigger: TGCCTGTAGTCCCAGCTGTCAGACATTTAAACCAGA...CAGCAGCTCTAGGCGCTGCTCTTGTCTATGGAGTAGCCATTCTTTTGTTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR-3UTR GCA 90 bp CTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCAGGAGTCTCGCTTTGTTaGCCAGGCTGGCGTGCAATG +
Preference number: 2 (lower is better)
Translates to: LGFGGIWLASLLQSVLSAGVSLC*PGWRAM
Trigger: CATTGCACGCCAGCCTGGGCAACAAAGCGAGACTCC...TGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR-3UTR CCA 90 bp GGGTGGATTATTCATTCCTCCCCCTTTTGGGACATATCGGGTAACTTCCTGATGTGGCCAACTTGGTTTTaGTGGGATTTGGTTGGCTTC +
Preference number: 2 (lower is better)
Translates to: GWIIHSSPFWDISGNFLMWPTWF*WDLVGF
Trigger: GAAGCCAACCAAATCCCACCAAAACCAAGTTGGCCA...CATCAGGAAGTTACCCGATATGTCCCAAAAGGGGGAGGAATGAATAATCCACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR CAA 90 bp AGTAGGTCTCAGCCTCATTTTATTCAGCTCCTATTCCAGATGGAGTaGCTCTGGTTTAAATGTCTGACAGCTGGGACTACAGGCACACAC +
Preference number: 2 (lower is better)
Translates to: SRSQPHFIQLLFQME*LWFKCLTAGTTGTH
Trigger: GTGTGTGCCTGTAGTCCCAGCTGTCAGACATTTAAACCAGAGCAACTCCATCTGGAATAGGAGCTGAATAAAATGAGGCTGAGACCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR-3UTR GCA 90 bp CTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCATTGCCCAGGCTGGCGTaGAATGGTGTGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: LGFGGIWLASLLQSVLSALPRLA*NGVILA
Trigger: AGCCAAGATCACACCATTGCACGCCAGCCTGGGCAA...TGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR-3UTR GCA 90 bp GGGTGGATTATTCATTCCTCCCCCTTTTGGGACATATCGGGTAACTTCCTGATGTCCTGTGACTTAGAATaGCTCCACTGTCTGAGAATG +
Preference number: 2 (lower is better)
Translates to: GWIIHSSPFWDISGNFLMSCDLE*LHCLRM
Trigger: CATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGA...CATCAGGAAGTTACCCGATATGTCCCAAAAGGGGGAGGAATGAATAATCCACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR-3UTR CCA 90 bp GGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGCAGAGCTCCTATTCCAGATaGAGTTGCTCTGGTTTAAAT +
Preference number: 2 (lower is better)
Translates to: GPPVSSCDLECLHCLRMQSSYSR*SCSGLN
Trigger: ATTTAAACCAGAGCAACTCCATCTGGAATAGGAGCT...CTGCATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR-3UTR CCA 90 bp GCAGCGCCTAGAGCTGCTGGTTGCCCACTTTTATGGTTATTTCTTGCTTATTTGCTCTCGTGGCCAACTTaGTTTTGGTGGGATTTGGTT +
Preference number: 2 (lower is better)
Translates to: AAPRAAGCPLLWLFLAYLLSWPT*FWWDLV
Trigger: AACCAAATCCCACCAAAACCAAGTTGGCCACGAGAG...CAAATAAGCAAGAAATAACCATAAAAGTGGGCAACCAGCAGCTCTAGGCGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR-3UTR GCA 90 bp TACGGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGGAGAGAAGGAAACTTTaGACTCTGTTATCTTCAACC +
Preference number: 2 (lower is better)
Translates to: YGPPVSSCDLECLHCLRMERRKL*TLLSST
Trigger: GGTTGAAGATAACAGAGTGCAAAGTTTCCTTCTCTC...CATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCCGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR-3UTR CCA 90 bp TACGGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGAGCTCCTATTCCAGATaGAGTTGCTCTGGTTTAAAT +
Preference number: 2 (lower is better)
Translates to: YGPPVSSCDLECLHCLRMSSYSR*SCSGLN
Trigger: ATTTAAACCAGAGCAACTCCATCTGGAATAGGAGCT...CATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCCGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR-3UTR CCA 90 bp AAAGGAACAAAAGAATGGCTACTCCATAGACAAGAGCAGCGCCTAGAGCTGCTGGGTTTTGGTGGGATTTaGTTGGCTTCTTTACTGCAA +
Preference number: 2 (lower is better)
Translates to: KGTKEWLLHRQEQRLELLGFGGI*LASLLQ
Trigger: TTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACC...CAGCAGCTCTAGGCGCTGCTCTTGTCTATGGAGTAGCCATTCTTTTGTTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR-3UTR CCA 90 bp AAAGGAACAAAAGAATGGCTACTCCATAGACAAGAGCAGCGCCTAGAGCTGCTGCCAACTTGGTTTTGGTaGGATTTGGTTGGCTTCTTT +
Preference number: 2 (lower is better)
Translates to: KGTKEWLLHRQEQRLELLPTWFW*DLVGFF
Trigger: AAAGAAGCCAACCAAATCCCACCAAAACCAAGTTGG...CAGCAGCTCTAGGCGCTGCTCTTGTCTATGGAGTAGCCATTCTTTTGTTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR-3UTR CCA 90 bp TTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCAAAGTCTTTATGACCTGCAGGCTGGCGTGCAATaGTGTGATCTTGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: FGWLLYCNLFYQQSLYDLQAGVQ*CDLGSL
Trigger: CAGTGAGCCAAGATCACACCATTGCACGCCAGCCTG...CAGGTCATAAAGACTTTGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR-3UTR CCA 90 bp GGGTGGATTATTCATTCCTCCCCCTTTTGGGACATATCGGGTAACTTCCTGATGAGCTCCTATTCCAGATaGAGTTGCTCTGGTTTAAAT +
Preference number: 2 (lower is better)
Translates to: GWIIHSSPFWDISGNFLMSSYSR*SCSGLN
Trigger: ATTTAAACCAGAGCAACTCCATCTGGAATAGGAGCT...CATCAGGAAGTTACCCGATATGTCCCAAAAGGGGGAGGAATGAATAATCCACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR-3UTR GCA 90 bp GCAGCGCCTAGAGCTGCTGGTTGCCCACTTTTATGGTTATTTCTTGCTTATTTGGAGAGAAGGAAACTTTaGACTCTGTTATCTTCAACC +
Preference number: 2 (lower is better)
Translates to: AAPRAAGCPLLWLFLAYLERRKL*TLLSST
Trigger: GGTTGAAGATAACAGAGTGCAAAGTTTCCTTCTCTC...CAAATAAGCAAGAAATAACCATAAAAGTGGGCAACCAGCAGCTCTAGGCGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR-3UTR GCA 90 bp AAAGGAACAAAAGAATGGCTACTCCATAGACAAGAGCAGCGCCTAGAGCTGCTGGGTTGGCTTCTTTACTaGAATCTGTTTTATCAGCAA +
Preference number: 2 (lower is better)
Translates to: KGTKEWLLHRQEQRLELLGWLLY*NLFYQQ
Trigger: TTGCTGATAAAACAGATTGCAGTAAAGAAGCCAACC...CAGCAGCTCTAGGCGCTGCTCTTGTCTATGGAGTAGCCATTCTTTTGTTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR-3UTR GCA 90 bp CTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCATCCTGTGACTTAGAATaGCTCCACTGTCTGAGAATG +
Preference number: 2 (lower is better)
Translates to: LGFGGIWLASLLQSVLSASCDLE*LHCLRM
Trigger: CATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGA...TGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR-3UTR GCA 90 bp GCAGCGCCTAGAGCTGCTGGTTGCCCACTTTTATGGTTATTTCTTGCTTATTTGGGTTGGCTTCTTTACTaGAATCTGTTTTATCAGCAA +
Preference number: 2 (lower is better)
Translates to: AAPRAAGCPLLWLFLAYLGWLLY*NLFYQQ
Trigger: TTGCTGATAAAACAGATTGCAGTAAAGAAGCCAACC...CAAATAAGCAAGAAATAACCATAAAAGTGGGCAACCAGCAGCTCTAGGCGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR-3UTR CCA 90 bp GGCCAACTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTACAGATGGAGTTGCTCTaGTTTAAATGTCTGACAGCT +
Preference number: 2 (lower is better)
Translates to: GQLGFGGIWLASLLQSVLQMELL*FKCLTA
Trigger: AGCTGTCAGACATTTAAACCAGAGCAACTCCATCTG...TAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAGTTGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR-3UTR GCA 90 bp GGCCAACTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTAGAGAGAAGGAAACTTTaGACTCTGTTATCTTCAACC +
Preference number: 2 (lower is better)
Translates to: GQLGFGGIWLASLLQSVLERRKL*TLLSST
Trigger: GGTTGAAGATAACAGAGTGCAAAGTTTCCTTCTCTC...TAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAGTTGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR-3UTR CCA 90 bp TTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCAAAGTCTTTATGACCTGCAGATGGAGTTGCTCTaGTTTAAATGTCTGACAGCT +
Preference number: 2 (lower is better)
Translates to: FGWLLYCNLFYQQSLYDLQMELL*FKCLTA
Trigger: AGCTGTCAGACATTTAAACCAGAGCAACTCCATCTG...CAGGTCATAAAGACTTTGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR-3UTR CAA 90 bp AGGCTGGTCTCGAACTCCCGACCTCAGGCGATCTGCCCACCTCAACCTCCCAAAGGAGAGAAGGAAACTTaGCACTCTGTTATCTTCAAC +
Preference number: 3 (lower is better)
Translates to: RLVSNSRPQAICPPQPPKGEKET*HSVIFN
Trigger: GTTGAAGATAACAGAGTGCAAAGTTTCCTTCTCTCC...TTTGGGAGGTTGAGGTGGGCAGATCGCCTGAGGTCGGGAGTTCGAGACCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
3UTR TCA 72 bp GACCTGTATCTTGTACGGACCTCCTGTCTCATCCTGTaGCTTAGAATGCCTCCACTGTCTGAGAATGCAGCC +
Preference number: 3 (lower is better)
Translates to: DLYLVRTSCLIL*LRMPPLSENAA
Trigger: GGCTGCATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCCGTACAAGATACAGGTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR GCA 72 bp TTGTACGGACCTCCTGTCTCATCCTGTGACTTAGAATaGCTCCACTGTCTGAGAATGCAGCCCAGTAGGTCT +
Preference number: 3 (lower is better)
Translates to: LYGPPVSSCDLE*LHCLRMQPSRS
Trigger: AGACCTACTGGGCTGCATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCCGTACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR-3UTR CAA 90 bp AAAGGAACAAAAGAATGGCTACTCCATAGACAAGAGCAGCGCCTAGAGCTGCTGTGCAATGGTGTGATCTaGGCTCACTGCAACCTCCGT +
Preference number: 3 (lower is better)
Translates to: KGTKEWLLHRQEQRLELLCNGVI*AHCNLR
Trigger: ACGGAGGTTGCAGTGAGCCAAGATCACACCATTGCA...CAGCAGCTCTAGGCGCTGCTCTTGTCTATGGAGTAGCCATTCTTTTGTTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR-3UTR CAA 90 bp TACGGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGGGAGAGAAGGAAACTTaGCACTCTGTTATCTTCAAC +
Preference number: 3 (lower is better)
Translates to: YGPPVSSCDLECLHCLRMGEKET*HSVIFN
Trigger: GTTGAAGATAACAGAGTGCAAAGTTTCCTTCTCTCC...CATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCCGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR-3UTR CAA 90 bp GGCCAACTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTATGCAATGGTGTGATCTaGGCTCACTGCAACCTCCGT +
Preference number: 3 (lower is better)
Translates to: GQLGFGGIWLASLLQSVLCNGVI*AHCNLR
Trigger: ACGGAGGTTGCAGTGAGCCAAGATCACACCATTGCA...TAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAGTTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR-3UTR CAA 90 bp TACGGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGCTATTCCAGATGGAGTaGCTCTGGTTTAAATGTCTG +
Preference number: 3 (lower is better)
Translates to: YGPPVSSCDLECLHCLRMLFQME*LWFKCL
Trigger: CAGACATTTAAACCAGAGCAACTCCATCTGGAATAG...CATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCCGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR-3UTR CAA 90 bp GGGTGGATTATTCATTCCTCCCCCTTTTGGGACATATCGGGTAACTTCCTGATGTTTGGTGGGATTTGGTaGGCTTCTTTACTGCAATCT +
Preference number: 3 (lower is better)
Translates to: GWIIHSSPFWDISGNFLMFGGIW*ASLLQS
Trigger: AGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAA...CATCAGGAAGTTACCCGATATGTCCCAAAAGGGGGAGGAATGAATAATCCACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR CCA 72 bp CATTTTATTCAGCTCCTATTCCAGATGGAGTTGCTCTaGTTTAAATGTCTGACAGCTGGGACTACAGGCACA +
Preference number: 3 (lower is better)
Translates to: HFIQLLFQMELL*FKCLTAGTTGT
Trigger: TGTGCCTGTAGTCCCAGCTGTCAGACATTTAAACCAGAGCAACTCCATCTGGAATAGGAGCTGAATAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR CCA 72 bp ACTCTCGTGGCCAACTTGGTTTTGGTGGGATTTGGTTaGCTTCTTTACTGCAATCTGTTTTATCAGCAAAGT +
Preference number: 3 (lower is better)
Translates to: TLVANLVLVGFG*LLYCNLFYQQS
Trigger: ACTTTGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAGTTGGCCACGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp AGGCTGGTCTCGAACTCCCGACCTCAGGCGATCTGCCCACCTCAACCTCCCAAACCGCCTGGGTGCCCTTaGGCATCCGGGCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: RLVSNSRPQAICPPQPPKPPGCP*ASGPQA
Trigger: GGCCTGAGGCCCGGATGCCCAAGGGCACCCAGGCGG...TTTGGGAGGTTGAGGTGGGCAGATCGCCTGAGGTCGGGAGTTCGAGACCAGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR GCA 90 bp AGGCTGGTCTCGAACTCCCGACCTCAGGCGATCTGCCCACCTCAACCTCCCAAAAGGAGGCGCAGGGCCTaGCTGAGACAGGCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: RLVSNSRPQAICPPQPPKRRRRA*LRQACS
Trigger: AGAACAGGCCTGTCTCAGGCAGGCCCTGCGCCTCCT...TTTGGGAGGTTGAGGTGGGCAGATCGCCTGAGGTCGGGAGTTCGAGACCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000525998.5
CDS-3UTR GCA 90 bp AGGCTGGTCTCGAACTCCCGACCTCAGGCGATCTGCCCACCTCAACCTCCCAAATCCAGGATCGTGCTGTaGCGGGAGAACCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: RLVSNSRPQAICPPQPPKSRIVL*RENLGL
Trigger: GAGGCCCAGGTTCTCCCGGCACAGCACGATCCTGGA...TTTGGGAGGTTGAGGTGGGCAGATCGCCTGAGGTCGGGAGTTCGAGACCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR CCA 90 bp AGGCTGGTCTCGAACTCCCGACCTCAGGCGATCTGCCCACCTCAACCTCCCAAATGTGCCGGGAGAACCTaGGCCTCGGGGTTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: RLVSNSRPQAICPPQPPKCAGRT*ASGFLS
Trigger: AGACAGAAACCCCGAGGCCCAGGTTCTCCCGGCACA...TTTGGGAGGTTGAGGTGGGCAGATCGCCTGAGGTCGGGAGTTCGAGACCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR CCA 90 bp GGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGCAGCCGCCTGGGTGCCCTTaGGCATCCGGGCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: GPPVSSCDLECLHCLRMQPPGCP*ASGPQA
Trigger: GGCCTGAGGCCCGGATGCCCAAGGGCACCCAGGCGG...CTGCATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp AGGCTGGTCTCGAACTCCCGACCTCAGGCGATCTGCCCACCTCAACCTCCCAAAACCAGGCACAGGCTTTaGCCCTCCAGTACTGGGAGA +
Preference number: 4 (lower is better)
Translates to: RLVSNSRPQAICPPQPPKTRHRL*PSSTGR
Trigger: TCTCCCAGTACTGGAGGGCCAAAGCCTGTGCCTGGT...TTTGGGAGGTTGAGGTGGGCAGATCGCCTGAGGTCGGGAGTTCGAGACCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR CCA 90 bp TACGGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGCCGCCTGGGTGCCCTTaGGCATCCGGGCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: YGPPVSSCDLECLHCLRMPPGCP*ASGPQA
Trigger: GGCCTGAGGCCCGGATGCCCAAGGGCACCCAGGCGG...CATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCCGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR TCA 90 bp GGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGCAGGGCGCAGGGCCTGCCTaGGACAGGCCTGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GPPVSSCDLECLHCLRMQGAGPA*DRPVLW
Trigger: CCAGAGAACAGGCCTGTCTCAGGCAGGCCCTGCGCC...CTGCATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
CDS-3UTR TCA 90 bp AGGCTGGTCTCGAACTCCCGACCTCAGGCGATCTGCCCACCTCAACCTCCCAAACTCGGGGTTTCTGTCTaGGTCCGTCTCTTCGGTAGA +
Preference number: 4 (lower is better)
Translates to: RLVSNSRPQAICPPQPPKLGVSV*VRLFGR
Trigger: TCTACCGAAGAGACGGACTCAGACAGAAACCCCGAG...TTTGGGAGGTTGAGGTGGGCAGATCGCCTGAGGTCGGGAGTTCGAGACCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR TCA 90 bp AGGCTGGTCTCGAACTCCCGACCTCAGGCGATCTGCCCACCTCAACCTCCCAAACCGTCGGGACCACATTaGTGTAATCCAGGATCGTGC +
Preference number: 4 (lower is better)
Translates to: RLVSNSRPQAICPPQPPKPSGPH*CNPGSC
Trigger: GCACGATCCTGGATTACATCAATGTGGTCCCGACGG...TTTGGGAGGTTGAGGTGGGCAGATCGCCTGAGGTCGGGAGTTCGAGACCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR CCA 90 bp AAAGGAACAAAAGAATGGCTACTCCATAGACAAGAGCAGCGCCTAGAGCTGCTGCCGCCTGGGTGCCCTTaGGCATCCGGGCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: KGTKEWLLHRQEQRLELLPPGCP*ASGPQA
Trigger: GGCCTGAGGCCCGGATGCCCAAGGGCACCCAGGCGG...CAGCAGCTCTAGGCGCTGCTCTTGTCTATGGAGTAGCCATTCTTTTGTTCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp AGGCTGGTCTCGAACTCCCGACCTCAGGCGATCTGCCCACCTCAACCTCCCAAAGTACTGGGAGAGACGTaGCGTTCCCAAGGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: RLVSNSRPQAICPPQPPKVLGET*RSQGFP
Trigger: TGGAAAACCTTGGGAACGGCACGTCTCTCCCAGTAC...TTTGGGAGGTTGAGGTGGGCAGATCGCCTGAGGTCGGGAGTTCGAGACCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR CCA 90 bp AGGCTGGTCTCGAACTCCCGACCTCAGGCGATCTGCCCACCTCAACCTCCCAAACCACAGGAGCACCCTTaGTTGTCTCAGTCACTGCTT +
Preference number: 4 (lower is better)
Translates to: RLVSNSRPQAICPPQPPKPQEHP*LSQSLL
Trigger: AAGCAGTGACTGAGACAACCAAGGGTGCTCCTGTGG...TTTGGGAGGTTGAGGTGGGCAGATCGCCTGAGGTCGGGAGTTCGAGACCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR CCA 90 bp AGGCTGGTCTCGAACTCCCGACCTCAGGCGATCTGCCCACCTCAACCTCCCAAAGAAGTGGGAGGTCGTTaGTTTGGTTCCTTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: RLVSNSRPQAICPPQPPKEVGGR*FGSLGG
Trigger: TCCTCCCAAGGAACCAAACCAACGACCTCCCACTTC...TTTGGGAGGTTGAGGTGGGCAGATCGCCTGAGGTCGGGAGTTCGAGACCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000525998.5
CDS-3UTR CCA 90 bp AAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACCCGCCTGGGTGCCCTTaGGCATCCGGGCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: KRERERKREREGEKETLHPPGCP*ASGPQA
Trigger: GGCCTGAGGCCCGGATGCCCAAGGGCACCCAGGCGG...GTGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR TCA 90 bp AGGCTGGTCTCGAACTCCCGACCTCAGGCGATCTGCCCACCTCAACCTCCCAAATTTCTGGTTCTTCTTTaGTTCTGGGGAGGGAGCACC +
Preference number: 4 (lower is better)
Translates to: RLVSNSRPQAICPPQPPKFLVLL*FWGGST
Trigger: GGTGCTCCCTCCCCAGAATCAAAGAAGAACCAGAAA...TTTGGGAGGTTGAGGTGGGCAGATCGCCTGAGGTCGGGAGTTCGAGACCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR TCA 90 bp AGGCTGGTCTCGAACTCCCGACCTCAGGCGATCTGCCCACCTCAACCTCCCAAATGGGGCTTGAGTGGATaGTTTGGGTTCTGGGAAACT +
Preference number: 4 (lower is better)
Translates to: RLVSNSRPQAICPPQPPKWGLSG*FGFWET
Trigger: AGTTTCCCAGAACCCAAATCATCCACTCAAGCCCCA...TTTGGGAGGTTGAGGTGGGCAGATCGCCTGAGGTCGGGAGTTCGAGACCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR TCA 90 bp AGGCTGGTCTCGAACTCCCGACCTCAGGCGATCTGCCCACCTCAACCTCCCAAATGGGATTCTGGGGCTTaGGTGGATGATTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: RLVSNSRPQAICPPQPPKWDSGA*VDDLGS
Trigger: AGAACCCAAATCATCCACTCAAGCCCCAGAATCCCA...TTTGGGAGGTTGAGGTGGGCAGATCGCCTGAGGTCGGGAGTTCGAGACCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR CCA 90 bp TACGGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGACATTTCCCTGGGGCTaGGGCTCCAGGGCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: YGPPVSSCDLECLHCLRMTFPWG*GSRAGV
Trigger: CACGCCAGCCCTGGAGCCCCAGCCCCAGGGAAATGT...CATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
CDS-3UTR TCA 90 bp AGGCTGGTCTCGAACTCCCGACCTCAGGCGATCTGCCCACCTCAACCTCCCAAAGTTGGAGAATGCCGTTaGGATGAGTCCCTTCTTATC +
Preference number: 4 (lower is better)
Translates to: RLVSNSRPQAICPPQPPKVGECR*DESLLI
Trigger: GATAAGAAGGGACTCATCTCAACGGCATTCTCCAAC...TTTGGGAGGTTGAGGTGGGCAGATCGCCTGAGGTCGGGAGTTCGAGACCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339313.10
CDS-3UTR TCA 90 bp AGGCTGGTCTCGAACTCCCGACCTCAGGCGATCTGCCCACCTCAACCTCCCAAAACCCTCATTGGAACTTaGCTTCTGCATAATCCGCCT +
Preference number: 4 (lower is better)
Translates to: RLVSNSRPQAICPPQPPKTLIGT*LLHNPP
Trigger: AGGCGGATTATGCAGAAGTCAAGTTCCAATGAGGGT...TTTGGGAGGTTGAGGTGGGCAGATCGCCTGAGGTCGGGAGTTCGAGACCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR CCA 90 bp GGGTGGATTATTCATTCCTCCCCCTTTTGGGACATATCGGGTAACTTCCTGATGCTCCCATCCATAGCCTaGGACCCGCCCAGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: GWIIHSSPFWDISGNFLMLPSIA*DPPSSE
Trigger: CTCGCTGCTGGGCGGGTCCCAGGCTATGGATGGGAG...CATCAGGAAGTTACCCGATATGTCCCAAAAGGGGGAGGAATGAATAATCCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp GGGTGGATTATTCATTCCTCCCCCTTTTGGGACATATCGGGTAACTTCCTGATGACATTTCCCTGGGGCTaGGGCTCCAGGGCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: GWIIHSSPFWDISGNFLMTFPWG*GSRAGV
Trigger: CACGCCAGCCCTGGAGCCCCAGCCCCAGGGAAATGT...CATCAGGAAGTTACCCGATATGTCCCAAAAGGGGGAGGAATGAATAATCCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
CDS-3UTR CCA 90 bp AGGCTGGTCTCGAACTCCCGACCTCAGGCGATCTGCCCACCTCAACCTCCCAAAGAGGACTGTTTGGTGTaGCTTTCTGATTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: RLVSNSRPQAICPPQPPKEDCLV*LSDSAS
Trigger: AGAAGCGGAATCAGAAAGCCACACCAAACAGTCCTC...TTTGGGAGGTTGAGGTGGGCAGATCGCCTGAGGTCGGGAGTTCGAGACCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR CCA 90 bp AGGCTGGTCTCGAACTCCCGACCTCAGGCGATCTGCCCACCTCAACCTCCCAAATGGCCAACTTGGTTTTaGTGGGATTTGGTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: RLVSNSRPQAICPPQPPKWPTWF*WDLVGF
Trigger: GAAGCCAACCAAATCCCACCAAAACCAAGTTGGCCA...TTTGGGAGGTTGAGGTGGGCAGATCGCCTGAGGTCGGGAGTTCGAGACCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR TCA 90 bp AAAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCAGGCGCAGGGCCTGCCTaGGACAGGCCTGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: KEREREKERERGREGNFAGAGPA*DRPVLW
Trigger: CCAGAGAACAGGCCTGTCTCAGGCAGGCCCTGCGCC...TGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000525998.5
CDS-3UTR TCA 90 bp AGGCTGGTCTCGAACTCCCGACCTCAGGCGATCTGCCCACCTCAACCTCCCAAAAGAATGCCGTTGAGATaGGTCCCTTCTTATAGTGCA +
Preference number: 4 (lower is better)
Translates to: RLVSNSRPQAICPPQPPKRMPLR*VPSYSA
Trigger: TGCACTATAAGAAGGGACTCATCTCAACGGCATTCT...TTTGGGAGGTTGAGGTGGGCAGATCGCCTGAGGTCGGGAGTTCGAGACCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR TCA 90 bp AGGCTGGTCTCGAACTCCCGACCTCAGGCGATCTGCCCACCTCAACCTCCCAAAGTTGGAGAATGCCGTTaGGATGAGTCCCTTCTTATA +
Preference number: 4 (lower is better)
Translates to: RLVSNSRPQAICPPQPPKVGECR*DESLLI
Trigger: TATAAGAAGGGACTCATCTCAACGGCATTCTCCAAC...TTTGGGAGGTTGAGGTGGGCAGATCGCCTGAGGTCGGGAGTTCGAGACCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR GCA 90 bp GGGTGGATTATTCATTCCTCCCCCTTTTGGGACATATCGGGTAACTTCCTGATGAGGAGGCGCAGGGCCTaGCTGAGACAGGCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: GWIIHSSPFWDISGNFLMRRRRA*LRQACS
Trigger: AGAACAGGCCTGTCTCAGGCAGGCCCTGCGCCTCCT...CATCAGGAAGTTACCCGATATGTCCCAAAAGGGGGAGGAATGAATAATCCACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
CDS-3UTR GCA 90 bp AGGCTGGTCTCGAACTCCCGACCTCAGGCGATCTGCCCACCTCAACCTCCCAAAGGTTGTCTCAGTCACTaGTTTGAACCAGTAGCCATA +
Preference number: 4 (lower is better)
Translates to: RLVSNSRPQAICPPQPPKGCLSH*FEPVAI
Trigger: TATGGCTACTGGTTCAAAGCAGTGACTGAGACAACC...TTTGGGAGGTTGAGGTGGGCAGATCGCCTGAGGTCGGGAGTTCGAGACCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR GCA 90 bp AAAGGAACAAAAGAATGGCTACTCCATAGACAAGAGCAGCGCCTAGAGCTGCTGTCCAGGATCGTGCTGTaGCGGGAGAACCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: KGTKEWLLHRQEQRLELLSRIVL*RENLGL
Trigger: GAGGCCCAGGTTCTCCCGGCACAGCACGATCCTGGA...CAGCAGCTCTAGGCGCTGCTCTTGTCTATGGAGTAGCCATTCTTTTGTTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp GGGTGGATTATTCATTCCTCCCCCTTTTGGGACATATCGGGTAACTTCCTGATGTCCAGGATCGTGCTGTaGCGGGAGAACCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GWIIHSSPFWDISGNFLMSRIVL*RENLGL
Trigger: GAGGCCCAGGTTCTCCCGGCACAGCACGATCCTGGA...CATCAGGAAGTTACCCGATATGTCCCAAAAGGGGGAGGAATGAATAATCCACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp AAAGGAACAAAAGAATGGCTACTCCATAGACAAGAGCAGCGCCTAGAGCTGCTGCATAATCCGCCTGGGTaGCCTTGGGCATCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: KGTKEWLLHRQEQRLELLHNPPG*PWASGP
Trigger: AGGCCCGGATGCCCAAGGGCACCCAGGCGGATTATG...CAGCAGCTCTAGGCGCTGCTCTTGTCTATGGAGTAGCCATTCTTTTGTTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp GGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGCAGCCTGTTCTCTGGTCGTaGTGTGAGTGGCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GPPVSSCDLECLHCLRMQPVLWS*CEWLRA
Trigger: AGCCCTGAGCCACTCACAGCACGACCAGAGAACAGG...CTGCATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353836.9
CDS-3UTR CCA 90 bp AAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACCTCCCATCCATAGCCTaGGACCCGCCCAGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: KRERERKREREGEKETLHLPSIA*DPPSSE
Trigger: CTCGCTGCTGGGCGGGTCCCAGGCTATGGATGGGAG...GTGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR CCA 90 bp TACGGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGTGTGCCGGGAGAACCTaGGCCTCGGGGTTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: YGPPVSSCDLECLHCLRMCAGRT*ASGFLS
Trigger: AGACAGAAACCCCGAGGCCCAGGTTCTCCCGGCACA...CATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp GGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGCAGCCTGGGTCTGACGCCTaGGAAGTTGAGCGTGGCATA +
Preference number: 4 (lower is better)
Translates to: GPPVSSCDLECLHCLRMQPGSDA*EVERGI
Trigger: TATGCCACGCTCAACTTCCCAGGCGTCAGACCCAGG...CTGCATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR TCA 90 bp GGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGCAGCTCGGGGTTTCTGTCTaGGTCCGTCTCTTCGGTAGA +
Preference number: 4 (lower is better)
Translates to: GPPVSSCDLECLHCLRMQLGVSV*VRLFGR
Trigger: TCTACCGAAGAGACGGACTCAGACAGAAACCCCGAG...CTGCATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp GGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGCAGTGTAATCCAGGATCGTaGTGTGCCGGGAGAACCTGG +
Preference number: 4 (lower is better)
Translates to: GPPVSSCDLECLHCLRMQCNPGS*CAGRTW
Trigger: CCAGGTTCTCCCGGCACAGCACGATCCTGGATTACA...CTGCATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp GCAGCGCCTAGAGCTGCTGGTTGCCCACTTTTATGGTTATTTCTTGCTTATTTGCATAATCCGCCTGGGTaGCCTTGGGCATCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: AAPRAAGCPLLWLFLAYLHNPPG*PWASGP
Trigger: AGGCCCGGATGCCCAAGGGCACCCAGGCGGATTATG...CAAATAAGCAAGAAATAACCATAAAAGTGGGCAACCAGCAGCTCTAGGCGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp AAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACCATAATCCGCCTGGGTaGCCTTGGGCATCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: KRERERKREREGEKETLHHNPPG*PWASGP
Trigger: AGGCCCGGATGCCCAAGGGCACCCAGGCGGATTATG...GTGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR CCA 90 bp AAAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACTCCCATCCATAGCCTaGGACCCGCCCAGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: KEREREKERERGREGNFALPSIA*DPPSSE
Trigger: CTCGCTGCTGGGCGGGTCCCAGGCTATGGATGGGAG...TGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR CCA 90 bp GGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGCAGTTGGGCTTCCAGGTATaGGACATTTCCCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GPPVSSCDLECLHCLRMQLGFQV*DISLGL
Trigger: CAGCCCCAGGGAAATGTCCCATACCTGGAAGCCCAA...CTGCATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
CDS-3UTR CCA 90 bp AAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACGGAGGGAGCACCTGGTaGAAGAGGGGTCCGAGGACT +
Preference number: 4 (lower is better)
Translates to: KRERERKREREGEKETLHGGSTW*KRGPRT
Trigger: AGTCCTCGGACCCCTCTTCCACCAGGTGCTCCCTCC...GTGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR CCA 90 bp AGGCTGGTCTCGAACTCCCGACCTCAGGCGATCTGCCCACCTCAACCTCCCAAAGGTTTTGGTGGGATTTaGTTGGCTTCTTTACTGCAA +
Preference number: 4 (lower is better)
Translates to: RLVSNSRPQAICPPQPPKGFGGI*LASLLQ
Trigger: TTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACC...TTTGGGAGGTTGAGGTGGGCAGATCGCCTGAGGTCGGGAGTTCGAGACCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp AGGCTGGTCTCGAACTCCCGACCTCAGGCGATCTGCCCACCTCAACCTCCCAAACCAACTTGGTTTTGGTaGGATTTGGTTGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: RLVSNSRPQAICPPQPPKPTWFW*DLVGFF
Trigger: AAAGAAGCCAACCAAATCCCACCAAAACCAAGTTGG...TTTGGGAGGTTGAGGTGGGCAGATCGCCTGAGGTCGGGAGTTCGAGACCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR TCA 90 bp TACGGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGCTCGGGGTTTCTGTCTaGGTCCGTCTCTTCGGTAGA +
Preference number: 4 (lower is better)
Translates to: YGPPVSSCDLECLHCLRMLGVSV*VRLFGR
Trigger: TCTACCGAAGAGACGGACTCAGACAGAAACCCCGAG...CATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR TCA 90 bp GGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGCAGAATGCCTCCACTGTCTaGGAATGCAGCCCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: GPPVSSCDLECLHCLRMQNASTV*ECSPVG
Trigger: ACCTACTGGGCTGCATTCTCAGACAGTGGAGGCATT...CTGCATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp AAAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCAAGGAGGCGCAGGGCCTaGCTGAGACAGGCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: KEREREKERERGREGNFARRRRA*LRQACS
Trigger: AGAACAGGCCTGTCTCAGGCAGGCCCTGCGCCTCCT...TGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000525998.5
CDS-3UTR GCA 90 bp AAAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACATAATCCGCCTGGGTaGCCTTGGGCATCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: KEREREKERERGREGNFAHNPPG*PWASGP
Trigger: AGGCCCGGATGCCCAAGGGCACCCAGGCGGATTATG...TGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR GCA 90 bp TACGGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGTTGCCCAGGCTGGCGTaGAATGGTGTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: YGPPVSSCDLECLHCLRMLPRLA*NGVILA
Trigger: AGCCAAGATCACACCATTGCACGCCAGCCTGGGCAA...CATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCCGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp GGCCAACTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTACTCCCATCCATAGCCTaGGACCCGCCCAGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: GQLGFGGIWLASLLQSVLLPSIA*DPPSSE
Trigger: CTCGCTGCTGGGCGGGTCCCAGGCTATGGATGGGAG...TAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAGTTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp GGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGCAGCCACAGGAGCACCCTTaGTTGTCTCAGTCACTGCTT +
Preference number: 4 (lower is better)
Translates to: GPPVSSCDLECLHCLRMQPQEHP*LSQSLL
Trigger: AAGCAGTGACTGAGACAACCAAGGGTGCTCCTGTGG...CTGCATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp GGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGCAGGAAGTGGGAGGTCGTTaGTTTGGTTCCTTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GPPVSSCDLECLHCLRMQEVGGR*FGSLGG
Trigger: TCCTCCCAAGGAACCAAACCAACGACCTCCCACTTC...CTGCATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339313.10
ENST00000353836.9
CDS-3UTR CCA 90 bp AAAGGAACAAAAGAATGGCTACTCCATAGACAAGAGCAGCGCCTAGAGCTGCTGACCAGGCACAGGCTTTaGCCCTCCAGTACTGGGAGA +
Preference number: 4 (lower is better)
Translates to: KGTKEWLLHRQEQRLELLTRHRL*PSSTGR
Trigger: TCTCCCAGTACTGGAGGGCCAAAGCCTGTGCCTGGT...CAGCAGCTCTAGGCGCTGCTCTTGTCTATGGAGTAGCCATTCTTTTGTTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp GGGTGGATTATTCATTCCTCCCCCTTTTGGGACATATCGGGTAACTTCCTGATGACCAGGCACAGGCTTTaGCCCTCCAGTACTGGGAGA +
Preference number: 4 (lower is better)
Translates to: GWIIHSSPFWDISGNFLMTRHRL*PSSTGR
Trigger: TCTCCCAGTACTGGAGGGCCAAAGCCTGTGCCTGGT...CATCAGGAAGTTACCCGATATGTCCCAAAAGGGGGAGGAATGAATAATCCACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp GGGTGGATTATTCATTCCTCCCCCTTTTGGGACATATCGGGTAACTTCCTGATGCCTGGGTCTGACGCCTaGGAAGTTGAGCGTGGCATA +
Preference number: 4 (lower is better)
Translates to: GWIIHSSPFWDISGNFLMPGSDA*EVERGI
Trigger: TATGCCACGCTCAACTTCCCAGGCGTCAGACCCAGG...CATCAGGAAGTTACCCGATATGTCCCAAAAGGGGGAGGAATGAATAATCCACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp AGGCTGGTCTCGAACTCCCGACCTCAGGCGATCTGCCCACCTCAACCTCCCAAAAGCTCCTATTCCAGATaGAGTTGCTCTGGTTTAAAT +
Preference number: 4 (lower is better)
Translates to: RLVSNSRPQAICPPQPPKSSYSR*SCSGLN
Trigger: ATTTAAACCAGAGCAACTCCATCTGGAATAGGAGCT...TTTGGGAGGTTGAGGTGGGCAGATCGCCTGAGGTCGGGAGTTCGAGACCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp AAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACGTGGCTCAGGGCTCTTaGCAGAAGGGGAAGCCGAAG +
Preference number: 4 (lower is better)
Translates to: KRERERKREREGEKETLHVAQGS*QKGKPK
Trigger: CTTCGGCTTCCCCTTCTGCCAAGAGCCCTGAGCCAC...GTGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353836.9
CDS-3UTR TCA 90 bp AGGCTGGTCTCGAACTCCCGACCTCAGGCGATCTGCCCACCTCAACCTCCCAAAAGAACCCATCGTTCATaGAATTATATCTCACATAGC +
Preference number: 4 (lower is better)
Translates to: RLVSNSRPQAICPPQPPKRTHRS*NYISHS
Trigger: GCTATGTGAGATATAATTTCATGAACGATGGGTTCT...TTTGGGAGGTTGAGGTGGGCAGATCGCCTGAGGTCGGGAGTTCGAGACCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR TCA 90 bp AAAGGAACAAAAGAATGGCTACTCCATAGACAAGAGCAGCGCCTAGAGCTGCTGCTCGGGGTTTCTGTCTaGGTCCGTCTCTTCGGTAGA +
Preference number: 4 (lower is better)
Translates to: KGTKEWLLHRQEQRLELLLGVSV*VRLFGR
Trigger: TCTACCGAAGAGACGGACTCAGACAGAAACCCCGAG...CAGCAGCTCTAGGCGCTGCTCTTGTCTATGGAGTAGCCATTCTTTTGTTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR TCA 90 bp AAAGGAACAAAAGAATGGCTACTCCATAGACAAGAGCAGCGCCTAGAGCTGCTGCCGTCGGGACCACATTaGTGTAATCCAGGATCGTGC +
Preference number: 4 (lower is better)
Translates to: KGTKEWLLHRQEQRLELLPSGPH*CNPGSC
Trigger: GCACGATCCTGGATTACATCAATGTGGTCCCGACGG...CAGCAGCTCTAGGCGCTGCTCTTGTCTATGGAGTAGCCATTCTTTTGTTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR TCA 90 bp GGGTGGATTATTCATTCCTCCCCCTTTTGGGACATATCGGGTAACTTCCTGATGCCGTCGGGACCACATTaGTGTAATCCAGGATCGTGC +
Preference number: 4 (lower is better)
Translates to: GWIIHSSPFWDISGNFLMPSGPH*CNPGSC
Trigger: GCACGATCCTGGATTACATCAATGTGGTCCCGACGG...CATCAGGAAGTTACCCGATATGTCCCAAAAGGGGGAGGAATGAATAATCCACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp TACGGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGTTCTCTGGAGGATACTaGACAGAGAGGTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: YGPPVSSCDLECLHCLRMFSGGY*TERSRA
Trigger: AGCCCTGGACCTCTCTGTGCAGTATCCTCCAGAGAA...CATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
CDS-3UTR GCA 90 bp TACGGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGGTACTGGGAGAGACGTaGCGTTCCCAAGGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: YGPPVSSCDLECLHCLRMVLGET*RSQGFP
Trigger: TGGAAAACCTTGGGAACGGCACGTCTCTCCCAGTAC...CATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp GGCCAACTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCCAGGATCGTGCTGTaGCGGGAGAACCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GQLGFGGIWLASLLQSVLSRIVL*RENLGL
Trigger: GAGGCCCAGGTTCTCCCGGCACAGCACGATCCTGGA...TAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAGTTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp AAAGGAACAAAAGAATGGCTACTCCATAGACAAGAGCAGCGCCTAGAGCTGCTGGTGATCTTGGCTCACTaGAACCTCCGTCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: KGTKEWLLHRQEQRLELLVILAH*NLRLPG
Trigger: ACCTGGGAGACGGAGGTTGCAGTGAGCCAAGATCAC...CAGCAGCTCTAGGCGCTGCTCTTGTCTATGGAGTAGCCATTCTTTTGTTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp GGGTGGATTATTCATTCCTCCCCCTTTTGGGACATATCGGGTAACTTCCTGATGTTGCCCAGGCTGGCGTaGAATGGTGTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: GWIIHSSPFWDISGNFLMLPRLA*NGVILA
Trigger: AGCCAAGATCACACCATTGCACGCCAGCCTGGGCAA...CATCAGGAAGTTACCCGATATGTCCCAAAAGGGGGAGGAATGAATAATCCACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp AAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACGGAGTCTCGCTTTGTTaGCCAGGCTGGCGTGCAATG +
Preference number: 4 (lower is better)
Translates to: KRERERKREREGEKETLHGVSLC*PGWRAM
Trigger: CATTGCACGCCAGCCTGGGCAACAAAGCGAGACTCC...GTGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp TACGGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGCCACAGGAGCACCCTTaGTTGTCTCAGTCACTGCTT +
Preference number: 4 (lower is better)
Translates to: YGPPVSSCDLECLHCLRMPQEHP*LSQSLL
Trigger: AAGCAGTGACTGAGACAACCAAGGGTGCTCCTGTGG...CATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp GGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGCAGAGGAACTGGCCTTTTTaGGCTTCCAGGTATGGGACA +
Preference number: 4 (lower is better)
Translates to: GPPVSSCDLECLHCLRMQRNWPF*ASRYGT
Trigger: TGTCCCATACCTGGAAGCCCAAAAAGGCCAGTTCCT...CTGCATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
CDS-3UTR CCA 90 bp AAAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCATGTGCCGGGAGAACCTaGGCCTCGGGGTTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: KEREREKERERGREGNFACAGRT*ASGFLS
Trigger: AGACAGAAACCCCGAGGCCCAGGTTCTCCCGGCACA...TGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR CCA 90 bp TACGGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGGGTCCGAGGACTGTTTaGTGTGGCTTTCTGATTCCG +
Preference number: 4 (lower is better)
Translates to: YGPPVSSCDLECLHCLRMGPRTV*CGFLIP
Trigger: CGGAATCAGAAAGCCACACCAAACAGTCCTCGGACC...CATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp GGCCAACTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTAGGAGGGAGCACCTGGTaGAAGAGGGGTCCGAGGACT +
Preference number: 4 (lower is better)
Translates to: GQLGFGGIWLASLLQSVLGGSTW*KRGPRT
Trigger: AGTCCTCGGACCCCTCTTCCACCAGGTGCTCCCTCC...TAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAGTTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp AAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACCCTGGGTCTGACGCCTaGGAAGTTGAGCGTGGCATA +
Preference number: 4 (lower is better)
Translates to: KRERERKREREGEKETLHPGSDA*EVERGI
Trigger: TATGCCACGCTCAACTTCCCAGGCGTCAGACCCAGG...GTGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR CCA 90 bp GCAGCGCCTAGAGCTGCTGGTTGCCCACTTTTATGGTTATTTCTTGCTTATTTGCCTGGGTCTGACGCCTaGGAAGTTGAGCGTGGCATA +
Preference number: 4 (lower is better)
Translates to: AAPRAAGCPLLWLFLAYLPGSDA*EVERGI
Trigger: TATGCCACGCTCAACTTCCCAGGCGTCAGACCCAGG...CAAATAAGCAAGAAATAACCATAAAAGTGGGCAACCAGCAGCTCTAGGCGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp GGGTGGATTATTCATTCCTCCCCCTTTTGGGACATATCGGGTAACTTCCTGATGCAGGCTGGCGTGCAATaGTGTGATCTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: GWIIHSSPFWDISGNFLMQAGVQ*CDLGSL
Trigger: CAGTGAGCCAAGATCACACCATTGCACGCCAGCCTG...CATCAGGAAGTTACCCGATATGTCCCAAAAGGGGGAGGAATGAATAATCCACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp AAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACTGGTCGTGCTGTGAGTaGCTCAGGGCTCTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: KRERERKREREGEKETLHWSCCE*LRALGR
Trigger: TCTGCCAAGAGCCCTGAGCCACTCACAGCACGACCA...GTGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353836.9
CDS-3UTR TCA 90 bp TTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCAAAGTCTTTATGACCTGGGCGCAGGGCCTGCCTaGGACAGGCCTGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: FGWLLYCNLFYQQSLYDLGAGPA*DRPVLW
Trigger: CCAGAGAACAGGCCTGTCTCAGGCAGGCCCTGCGCC...CAGGTCATAAAGACTTTGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
CDS-3UTR TCA 90 bp AAAGGAACAAAAGAATGGCTACTCCATAGACAAGAGCAGCGCCTAGAGCTGCTGGGAAAAGAAGAGCCGTaGTGCCGATTCCCAGAAACG +
Preference number: 4 (lower is better)
Translates to: KGTKEWLLHRQEQRLELLGKEEP*CRFPET
Trigger: CGTTTCTGGGAATCGGCATCACGGCTCTTCTTTTCC...CAGCAGCTCTAGGCGCTGCTCTTGTCTATGGAGTAGCCATTCTTTTGTTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR TCA 90 bp TACGGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGTGGGATTCTGGGGCTTaGGTGGATGATTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: YGPPVSSCDLECLHCLRMWDSGA*VDDLGS
Trigger: AGAACCCAAATCATCCACTCAAGCCCCAGAATCCCA...CATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCCGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR TCA 90 bp GGGTGGATTATTCATTCCTCCCCCTTTTGGGACATATCGGGTAACTTCCTGATGAATGCCTCCACTGTCTaGGAATGCAGCCCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: GWIIHSSPFWDISGNFLMNASTV*ECSPVG
Trigger: ACCTACTGGGCTGCATTCTCAGACAGTGGAGGCATT...CATCAGGAAGTTACCCGATATGTCCCAAAAGGGGGAGGAATGAATAATCCACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp AAAGGAACAAAAGAATGGCTACTCCATAGACAAGAGCAGCGCCTAGAGCTGCTGTTCTCTGGAGGATACTaGACAGAGAGGTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: KGTKEWLLHRQEQRLELLFSGGY*TERSRA
Trigger: AGCCCTGGACCTCTCTGTGCAGTATCCTCCAGAGAA...CAGCAGCTCTAGGCGCTGCTCTTGTCTATGGAGTAGCCATTCTTTTGTTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
CDS-3UTR GCA 90 bp GGGTGGATTATTCATTCCTCCCCCTTTTGGGACATATCGGGTAACTTCCTGATGTTCTCTGGAGGATACTaGACAGAGAGGTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GWIIHSSPFWDISGNFLMFSGGY*TERSRA
Trigger: AGCCCTGGACCTCTCTGTGCAGTATCCTCCAGAGAA...CATCAGGAAGTTACCCGATATGTCCCAAAAGGGGGAGGAATGAATAATCCACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
CDS-3UTR GCA 90 bp GGGTGGATTATTCATTCCTCCCCCTTTTGGGACATATCGGGTAACTTCCTGATGGTACTGGGAGAGACGTaGCGTTCCCAAGGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: GWIIHSSPFWDISGNFLMVLGET*RSQGFP
Trigger: TGGAAAACCTTGGGAACGGCACGTCTCTCCCAGTAC...CATCAGGAAGTTACCCGATATGTCCCAAAAGGGGGAGGAATGAATAATCCACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp TACGGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGTTGGAACTTGACTTCTaGATAATCCGCCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: YGPPVSSCDLECLHCLRMLELDF*IIRLGA
Trigger: GGCACCCAGGCGGATTATGCAGAAGTCAAGTTCCAA...CATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCCGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp AAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACGTGATCTTGGCTCACTaGAACCTCCGTCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: KRERERKREREGEKETLHVILAH*NLRLPG
Trigger: ACCTGGGAGACGGAGGTTGCAGTGAGCCAAGATCAC...GTGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp AAAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCAGGAGTCTCGCTTTGTTaGCCAGGCTGGCGTGCAATG +
Preference number: 4 (lower is better)
Translates to: KEREREKERERGREGNFAGVSLC*PGWRAM
Trigger: CATTGCACGCCAGCCTGGGCAACAAAGCGAGACTCC...TGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp GCAGCGCCTAGAGCTGCTGGTTGCCCACTTTTATGGTTATTTCTTGCTTATTTGCCAGTAGCCATAAGCTaGGGTAGACCCTGTCCAGTC +
Preference number: 4 (lower is better)
Translates to: AAPRAAGCPLLWLFLAYLPVAIS*GRPCPV
Trigger: GACTGGACAGGGTCTACCCCAGCTTATGGCTACTGG...CAAATAAGCAAGAAATAACCATAAAAGTGGGCAACCAGCAGCTCTAGGCGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp TACGGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGAGGAACTGGCCTTTTTaGGCTTCCAGGTATGGGACA +
Preference number: 4 (lower is better)
Translates to: YGPPVSSCDLECLHCLRMRNWPF*ASRYGT
Trigger: TGTCCCATACCTGGAAGCCCAAAAAGGCCAGTTCCT...CATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCCGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
CDS-3UTR CCA 90 bp AAAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCAACCAGGCACAGGCTTTaGCCCTCCAGTACTGGGAGA +
Preference number: 4 (lower is better)
Translates to: KEREREKERERGREGNFATRHRL*PSSTGR
Trigger: TCTCCCAGTACTGGAGGGCCAAAGCCTGTGCCTGGT...TGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR CCA 90 bp GGCCAACTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTATGTGCCGGGAGAACCTaGGCCTCGGGGTTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: GQLGFGGIWLASLLQSVLCAGRT*ASGFLS
Trigger: AGACAGAAACCCCGAGGCCCAGGTTCTCCCGGCACA...TAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAGTTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR TCA 90 bp TACGGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGTCTCAGTCACTGCTTTaGACCAGTAGCCATAAGCTG +
Preference number: 4 (lower is better)
Translates to: YGPPVSSCDLECLHCLRMSQSLL*TSSHKL
Trigger: CAGCTTATGGCTACTGGTTCAAAGCAGTGACTGAGA...CATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCCGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR TCA 90 bp GCAGCGCCTAGAGCTGCTGGTTGCCCACTTTTATGGTTATTTCTTGCTTATTTGGGAAAAGAAGAGCCGTaGTGCCGATTCCCAGAAACG +
Preference number: 4 (lower is better)
Translates to: AAPRAAGCPLLWLFLAYLGKEEP*CRFPET
Trigger: CGTTTCTGGGAATCGGCATCACGGCTCTTCTTTTCC...CAAATAAGCAAGAAATAACCATAAAAGTGGGCAACCAGCAGCTCTAGGCGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR TCA 90 bp AAAGGAACAAAAGAATGGCTACTCCATAGACAAGAGCAGCGCCTAGAGCTGCTGTTTCTGGTTCTTCTTTaGTTCTGGGGAGGGAGCACC +
Preference number: 4 (lower is better)
Translates to: KGTKEWLLHRQEQRLELLFLVLL*FWGGST
Trigger: GGTGCTCCCTCCCCAGAATCAAAGAAGAACCAGAAA...CAGCAGCTCTAGGCGCTGCTCTTGTCTATGGAGTAGCCATTCTTTTGTTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR TCA 90 bp TACGGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGGGGAAACTGGGCAACTaGTACTGCTTTTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: YGPPVSSCDLECLHCLRMGKLGN*YCFFWF
Trigger: GAACCAGAAAAAGCAGTATCAGTTGCCCAGTTTCCC...CATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCCGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR TCA 90 bp AAAGGAACAAAAGAATGGCTACTCCATAGACAAGAGCAGCGCCTAGAGCTGCTGTGGGGCTTGAGTGGATaGTTTGGGTTCTGGGAAACT +
Preference number: 4 (lower is better)
Translates to: KGTKEWLLHRQEQRLELLWGLSG*FGFWET
Trigger: AGTTTCCCAGAACCCAAATCATCCACTCAAGCCCCA...CAGCAGCTCTAGGCGCTGCTCTTGTCTATGGAGTAGCCATTCTTTTGTTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR TCA 90 bp AAAGGAACAAAAGAATGGCTACTCCATAGACAAGAGCAGCGCCTAGAGCTGCTGTGGGATTCTGGGGCTTaGGTGGATGATTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: KGTKEWLLHRQEQRLELLWDSGA*VDDLGS
Trigger: AGAACCCAAATCATCCACTCAAGCCCCAGAATCCCA...CAGCAGCTCTAGGCGCTGCTCTTGTCTATGGAGTAGCCATTCTTTTGTTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR TCA 90 bp AAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACAATGCCTCCACTGTCTaGGAATGCAGCCCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: KRERERKREREGEKETLHNASTV*ECSPVG
Trigger: ACCTACTGGGCTGCATTCTCAGACAGTGGAGGCATT...GTGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR TCA 90 bp GCAGCGCCTAGAGCTGCTGGTTGCCCACTTTTATGGTTATTTCTTGCTTATTTGAATGCCTCCACTGTCTaGGAATGCAGCCCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: AAPRAAGCPLLWLFLAYLNASTV*ECSPVG
Trigger: ACCTACTGGGCTGCATTCTCAGACAGTGGAGGCATT...CAAATAAGCAAGAAATAACCATAAAAGTGGGCAACCAGCAGCTCTAGGCGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR TCA 90 bp GGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGCAGAGAATGCCGTTGAGATaGGTCCCTTCTTATAGTGCA +
Preference number: 4 (lower is better)
Translates to: GPPVSSCDLECLHCLRMQRMPLR*VPSYSA
Trigger: TGCACTATAAGAAGGGACTCATCTCAACGGCATTCT...CTGCATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp AAAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCATGTAATCCAGGATCGTaGTGTGCCGGGAGAACCTGG +
Preference number: 4 (lower is better)
Translates to: KEREREKERERGREGNFACNPGS*CAGRTW
Trigger: CCAGGTTCTCCCGGCACAGCACGATCCTGGATTACA...TGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR GCA 90 bp AAAGGAACAAAAGAATGGCTACTCCATAGACAAGAGCAGCGCCTAGAGCTGCTGTTGGAACTTGACTTCTaGATAATCCGCCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: KGTKEWLLHRQEQRLELLLELDF*IIRLGA
Trigger: GGCACCCAGGCGGATTATGCAGAAGTCAAGTTCCAA...CAGCAGCTCTAGGCGCTGCTCTTGTCTATGGAGTAGCCATTCTTTTGTTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp GGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGCAGTCCTGTGACTTAGAATaGCTCCACTGTCTGAGAATG +
Preference number: 4 (lower is better)
Translates to: GPPVSSCDLECLHCLRMQSCDLE*LHCLRM
Trigger: CATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGA...CTGCATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp GCAGCGCCTAGAGCTGCTGGTTGCCCACTTTTATGGTTATTTCTTGCTTATTTGCCACAGGAGCACCCTTaGTTGTCTCAGTCACTGCTT +
Preference number: 4 (lower is better)
Translates to: AAPRAAGCPLLWLFLAYLPQEHP*LSQSLL
Trigger: AAGCAGTGACTGAGACAACCAAGGGTGCTCCTGTGG...CAAATAAGCAAGAAATAACCATAAAAGTGGGCAACCAGCAGCTCTAGGCGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp AAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACGAAGTGGGAGGTCGTTaGTTTGGTTCCTTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: KRERERKREREGEKETLHEVGGR*FGSLGG
Trigger: TCCTCCCAAGGAACCAAACCAACGACCTCCCACTTC...GTGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000525998.5
CDS-3UTR CCA 90 bp TTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCAAAGTCTTTATGACCTGACATTTCCCTGGGGCTaGGGCTCCAGGGCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: FGWLLYCNLFYQQSLYDLTFPWG*GSRAGV
Trigger: CACGCCAGCCCTGGAGCCCCAGCCCCAGGGAAATGT...CAGGTCATAAAGACTTTGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
CDS-3UTR CCA 90 bp GGGTGGATTATTCATTCCTCCCCCTTTTGGGACATATCGGGTAACTTCCTGATGAGGAACTGGCCTTTTTaGGCTTCCAGGTATGGGACA +
Preference number: 4 (lower is better)
Translates to: GWIIHSSPFWDISGNFLMRNWPF*ASRYGT
Trigger: TGTCCCATACCTGGAAGCCCAAAAAGGCCAGTTCCT...CATCAGGAAGTTACCCGATATGTCCCAAAAGGGGGAGGAATGAATAATCCACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
CDS-3UTR CCA 90 bp GGGTGGATTATTCATTCCTCCCCCTTTTGGGACATATCGGGTAACTTCCTGATGCACTCTCAGGTTCTCTaGAGGATACTGCACAGAGAG +
Preference number: 4 (lower is better)
Translates to: GWIIHSSPFWDISGNFLMHSQVL*RILHRE
Trigger: CTCTCTGTGCAGTATCCTCCAGAGAACCTGAGAGTG...CATCAGGAAGTTACCCGATATGTCCCAAAAGGGGGAGGAATGAATAATCCACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
CDS-3UTR CCA 90 bp TACGGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGGAGGACTGTTTGGTGTaGCTTTCTGATTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: YGPPVSSCDLECLHCLRMEDCLV*LSDSAS
Trigger: AGAAGCGGAATCAGAAAGCCACACCAAACAGTCCTC...CATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCCGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp GCAGCGCCTAGAGCTGCTGGTTGCCCACTTTTATGGTTATTTCTTGCTTATTTGGGTCCGAGGACTGTTTaGTGTGGCTTTCTGATTCCG +
Preference number: 4 (lower is better)
Translates to: AAPRAAGCPLLWLFLAYLGPRTV*CGFLIP
Trigger: CGGAATCAGAAAGCCACACCAAACAGTCCTCGGACC...CAAATAAGCAAGAAATAACCATAAAAGTGGGCAACCAGCAGCTCTAGGCGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp AAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACGGTCCGAGGACTGTTTaGTGTGGCTTTCTGATTCCG +
Preference number: 4 (lower is better)
Translates to: KRERERKREREGEKETLHGPRTV*CGFLIP
Trigger: CGGAATCAGAAAGCCACACCAAACAGTCCTCGGACC...GTGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR CCA 90 bp TACGGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGTGGCCAACTTGGTTTTaGTGGGATTTGGTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: YGPPVSSCDLECLHCLRMWPTWF*WDLVGF
Trigger: GAAGCCAACCAAATCCCACCAAAACCAAGTTGGCCA...CATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp TACGGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGCTCTCGTGGCCAACTTaGTTTTGGTGGGATTTGGTT +
Preference number: 4 (lower is better)
Translates to: YGPPVSSCDLECLHCLRMLSWPT*FWWDLV
Trigger: AACCAAATCCCACCAAAACCAAGTTGGCCACGAGAG...CATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR TCA 90 bp AAAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCAGGAAAAGAAGAGCCGTaGTGCCGATTCCCAGAAACG +
Preference number: 4 (lower is better)
Translates to: KEREREKERERGREGNFAGKEEP*CRFPET
Trigger: CGTTTCTGGGAATCGGCATCACGGCTCTTCTTTTCC...TGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR TCA 90 bp GCAGCGCCTAGAGCTGCTGGTTGCCCACTTTTATGGTTATTTCTTGCTTATTTGTTTCTGGTTCTTCTTTaGTTCTGGGGAGGGAGCACC +
Preference number: 4 (lower is better)
Translates to: AAPRAAGCPLLWLFLAYLFLVLL*FWGGST
Trigger: GGTGCTCCCTCCCCAGAATCAAAGAAGAACCAGAAA...CAAATAAGCAAGAAATAACCATAAAAGTGGGCAACCAGCAGCTCTAGGCGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR TCA 90 bp AAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACTGGGGCTTGAGTGGATaGTTTGGGTTCTGGGAAACT +
Preference number: 4 (lower is better)
Translates to: KRERERKREREGEKETLHWGLSG*FGFWET
Trigger: AGTTTCCCAGAACCCAAATCATCCACTCAAGCCCCA...GTGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR TCA 90 bp AAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACTGGGATTCTGGGGCTTaGGTGGATGATTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: KRERERKREREGEKETLHWDSGA*VDDLGS
Trigger: AGAACCCAAATCATCCACTCAAGCCCCAGAATCCCA...GTGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR TCA 90 bp AAAGGAACAAAAGAATGGCTACTCCATAGACAAGAGCAGCGCCTAGAGCTGCTGACCCTCATTGGAACTTaGCTTCTGCATAATCCGCCT +
Preference number: 4 (lower is better)
Translates to: KGTKEWLLHRQEQRLELLTLIGT*LLHNPP
Trigger: AGGCGGATTATGCAGAAGTCAAGTTCCAATGAGGGT...CAGCAGCTCTAGGCGCTGCTCTTGTCTATGGAGTAGCCATTCTTTTGTTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR TCA 90 bp GCAGCGCCTAGAGCTGCTGGTTGCCCACTTTTATGGTTATTTCTTGCTTATTTGATGAGCTTCAGACGCTaGGCTCACAGAACTCCTTTG +
Preference number: 4 (lower is better)
Translates to: AAPRAAGCPLLWLFLAYLMSFRR*AHRTPL
Trigger: CAAAGGAGTTCTGTGAGCTCAGCGTCTGAAGCTCAT...CAAATAAGCAAGAAATAACCATAAAAGTGGGCAACCAGCAGCTCTAGGCGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353836.9
CDS-3UTR TCA 90 bp TACGGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGAGAATGCCGTTGAGATaGGTCCCTTCTTATAGTGCA +
Preference number: 4 (lower is better)
Translates to: YGPPVSSCDLECLHCLRMRMPLR*VPSYSA
Trigger: TGCACTATAAGAAGGGACTCATCTCAACGGCATTCT...CATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCCGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp GGGTGGATTATTCATTCCTCCCCCTTTTGGGACATATCGGGTAACTTCCTGATGACCATCACTGACTCCTaGACTCGTATCCAGAATCTC +
Preference number: 4 (lower is better)
Translates to: GWIIHSSPFWDISGNFLMTITDS*TRIQNL
Trigger: GAGATTCTGGATACGAGTGCAGGAGTCAGTGATGGT...CATCAGGAAGTTACCCGATATGTCCCAAAAGGGGGAGGAATGAATAATCCACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp AAAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCAGTACTGGGAGAGACGTaGCGTTCCCAAGGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: KEREREKERERGREGNFAVLGET*RSQGFP
Trigger: TGGAAAACCTTGGGAACGGCACGTCTCTCCCAGTAC...TGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR GCA 90 bp GCAGCGCCTAGAGCTGCTGGTTGCCCACTTTTATGGTTATTTCTTGCTTATTTGTTCTTATCTGGCAGCTaGAGGATGGATCCACTCTGG +
Preference number: 4 (lower is better)
Translates to: AAPRAAGCPLLWLFLAYLFLSGS*RMDPLW
Trigger: CCAGAGTGGATCCATCCTGCAGCTGCCAGATAAGAA...CAAATAAGCAAGAAATAACCATAAAAGTGGGCAACCAGCAGCTCTAGGCGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339313.10
CDS-3UTR GCA 90 bp TTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCAAAGTCTTTATGACCTGTCCAGGATCGTGCTGTaGCGGGAGAACCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: FGWLLYCNLFYQQSLYDLSRIVL*RENLGL
Trigger: GAGGCCCAGGTTCTCCCGGCACAGCACGATCCTGGA...CAGGTCATAAAGACTTTGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp TTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCAAAGTCTTTATGACCTGCATAATCCGCCTGGGTaGCCTTGGGCATCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: FGWLLYCNLFYQQSLYDLHNPPG*PWASGP
Trigger: AGGCCCGGATGCCCAAGGGCACCCAGGCGGATTATG...CAGGTCATAAAGACTTTGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp GGCCAACTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTAGTGATCTTGGCTCACTaGAACCTCCGTCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: GQLGFGGIWLASLLQSVLVILAH*NLRLPG
Trigger: ACCTGGGAGACGGAGGTTGCAGTGAGCCAAGATCAC...TAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAGTTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp TACGGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGTCCTGTGACTTAGAATaGCTCCACTGTCTGAGAATG +
Preference number: 4 (lower is better)
Translates to: YGPPVSSCDLECLHCLRMSCDLE*LHCLRM
Trigger: CATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGA...CATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCCGTA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp GGCCAACTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTACTCACAGAACTCCTTTaGCTTCCCCCACACTCTCCG +
Preference number: 4 (lower is better)
Translates to: GQLGFGGIWLASLLQSVLLTELL*LPPHSP
Trigger: CGGAGAGTGTGGGGGAAGGCAAAGGAGTTCTGTGAG...TAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAGTTGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000353836.9
CDS-3UTR CCA 90 bp AAAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACCACAGGAGCACCCTTaGTTGTCTCAGTCACTGCTT +
Preference number: 4 (lower is better)
Translates to: KEREREKERERGREGNFAPQEHP*LSQSLL
Trigger: AAGCAGTGACTGAGACAACCAAGGGTGCTCCTGTGG...TGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR CCA 90 bp GGCCAACTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTATTGGGCTTCCAGGTATaGGACATTTCCCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GQLGFGGIWLASLLQSVLLGFQV*DISLGL
Trigger: CAGCCCCAGGGAAATGTCCCATACCTGGAAGCCCAA...TAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAGTTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
CDS-3UTR CCA 90 bp AAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACCACTCTCAGGTTCTCTaGAGGATACTGCACAGAGAG +
Preference number: 4 (lower is better)
Translates to: KRERERKREREGEKETLHHSQVL*RILHRE
Trigger: CTCTCTGTGCAGTATCCTCCAGAGAACCTGAGAGTG...GTGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
CDS-3UTR CCA 90 bp TTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCAAAGTCTTTATGACCTGGGAGGGAGCACCTGGTaGAAGAGGGGTCCGAGGACT +
Preference number: 4 (lower is better)
Translates to: FGWLLYCNLFYQQSLYDLGGSTW*KRGPRT
Trigger: AGTCCTCGGACCCCTCTTCCACCAGGTGCTCCCTCC...CAGGTCATAAAGACTTTGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp AAAGGAACAAAAGAATGGCTACTCCATAGACAAGAGCAGCGCCTAGAGCTGCTGATTCTGGGGCTTGAGTaGATGATTTGGGTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: KGTKEWLLHRQEQRLELLILGLE*MIWVLG
Trigger: TCCCAGAACCCAAATCATCCACTCAAGCCCCAGAAT...CAGCAGCTCTAGGCGCTGCTCTTGTCTATGGAGTAGCCATTCTTTTGTTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp GGGTGGATTATTCATTCCTCCCCCTTTTGGGACATATCGGGTAACTTCCTGATGATTCTGGGGCTTGAGTaGATGATTTGGGTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: GWIIHSSPFWDISGNFLMILGLE*MIWVLG
Trigger: TCCCAGAACCCAAATCATCCACTCAAGCCCCAGAAT...CATCAGGAAGTTACCCGATATGTCCCAAAAGGGGGAGGAATGAATAATCCACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp GGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGCAGGGTTTTGGTGGGATTTaGTTGGCTTCTTTACTGCAA +
Preference number: 4 (lower is better)
Translates to: GPPVSSCDLECLHCLRMQGFGGI*LASLLQ
Trigger: TTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACC...CTGCATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp CTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCAGCGGAAGCTGAGCCCTaGGGCCTGATGCATGAAATG +
Preference number: 4 (lower is better)
Translates to: LGFGGIWLASLLQSVLSAAEAEP*GLMHEM
Trigger: CATTTCATGCATCAGGCCCCAGGGCTCAGCTTCCGC...TGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000353836.9
CDS-3UTR TCA 90 bp AAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACTCTCAGTCACTGCTTTaGACCAGTAGCCATAAGCTG +
Preference number: 4 (lower is better)
Translates to: KRERERKREREGEKETLHSQSLL*TSSHKL
Trigger: CAGCTTATGGCTACTGGTTCAAAGCAGTGACTGAGA...GTGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR TCA 90 bp CTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCACCGTCGGGACCACATTaGTGTAATCCAGGATCGTGC +
Preference number: 4 (lower is better)
Translates to: LGFGGIWLASLLQSVLSAPSGPH*CNPGSC
Trigger: GCACGATCCTGGATTACATCAATGTGGTCCCGACGG...TGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp AAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACACCATCACTGACTCCTaGACTCGTATCCAGAATCTC +
Preference number: 4 (lower is better)
Translates to: KRERERKREREGEKETLHTITDS*TRIQNL
Trigger: GAGATTCTGGATACGAGTGCAGGAGTCAGTGATGGT...GTGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR GCA 90 bp CTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCATGTAATCCAGGATCGTaGTGTGCCGGGAGAACCTGG +
Preference number: 4 (lower is better)
Translates to: LGFGGIWLASLLQSVLSACNPGS*CAGRTW
Trigger: CCAGGTTCTCCCGGCACAGCACGATCCTGGATTACA...TGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp AAAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCATTGGAACTTGACTTCTaGATAATCCGCCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: KEREREKERERGREGNFALELDF*IIRLGA
Trigger: GGCACCCAGGCGGATTATGCAGAAGTCAAGTTCCAA...TGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR GCA 90 bp CTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCAGTGATCTTGGCTCACTaGAACCTCCGTCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LGFGGIWLASLLQSVLSAVILAH*NLRLPG
Trigger: ACCTGGGAGACGGAGGTTGCAGTGAGCCAAGATCAC...TGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp AAAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACACTCTCAGGTTCTCTaGAGGATACTGCACAGAGAG +
Preference number: 4 (lower is better)
Translates to: KEREREKERERGREGNFAHSQVL*RILHRE
Trigger: CTCTCTGTGCAGTATCCTCCAGAGAACCTGAGAGTG...TGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
CDS-3UTR CCA 90 bp GCAGCGCCTAGAGCTGCTGGTTGCCCACTTTTATGGTTATTTCTTGCTTATTTGGAGGACTGTTTGGTGTaGCTTTCTGATTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: AAPRAAGCPLLWLFLAYLEDCLV*LSDSAS
Trigger: AGAAGCGGAATCAGAAAGCCACACCAAACAGTCCTC...CAAATAAGCAAGAAATAACCATAAAAGTGGGCAACCAGCAGCTCTAGGCGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp AAAGGAACAAAAGAATGGCTACTCCATAGACAAGAGCAGCGCCTAGAGCTGCTGTGGGTTCTGGGAAACTaGGCAACTGATACTGCTTTT +
Preference number: 4 (lower is better)
Translates to: KGTKEWLLHRQEQRLELLWVLGN*ATDTAF
Trigger: AAAAGCAGTATCAGTTGCCCAGTTTCCCAGAACCCA...CAGCAGCTCTAGGCGCTGCTCTTGTCTATGGAGTAGCCATTCTTTTGTTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp CTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCACAGGCTGGCGTGCAATaGTGTGATCTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: LGFGGIWLASLLQSVLSAQAGVQ*CDLGSL
Trigger: CAGTGAGCCAAGATCACACCATTGCACGCCAGCCTG...TGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR TCA 90 bp AAAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCAGGGAAACTGGGCAACTaGTACTGCTTTTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: KEREREKERERGREGNFAGKLGN*YCFFWF
Trigger: GAACCAGAAAAAGCAGTATCAGTTGCCCAGTTTCCC...TGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR TCA 90 bp AAAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCAACCCTCATTGGAACTTaGCTTCTGCATAATCCGCCT +
Preference number: 4 (lower is better)
Translates to: KEREREKERERGREGNFATLIGT*LLHNPP
Trigger: AGGCGGATTATGCAGAAGTCAAGTTCCAATGAGGGT...TGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR TCA 90 bp AAAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCATCTGGTTTAAATGTCTaGCAGCTGGGACTACAGGCA +
Preference number: 4 (lower is better)
Translates to: KEREREKERERGREGNFASGLNV*QLGLQA
Trigger: TGCCTGTAGTCCCAGCTGTCAGACATTTAAACCAGA...TGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR TCA 90 bp GCAGCGCCTAGAGCTGCTGGTTGCCCACTTTTATGGTTATTTCTTGCTTATTTGAGAATGCCGTTGAGATaGGTCCCTTCTTATAGTGCA +
Preference number: 4 (lower is better)
Translates to: AAPRAAGCPLLWLFLAYLRMPLR*VPSYSA
Trigger: TGCACTATAAGAAGGGACTCATCTCAACGGCATTCT...CAAATAAGCAAGAAATAACCATAAAAGTGGGCAACCAGCAGCTCTAGGCGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp GCAGCGCCTAGAGCTGCTGGTTGCCCACTTTTATGGTTATTTCTTGCTTATTTGGGTTGTCTCAGTCACTaGTTTGAACCAGTAGCCATA +
Preference number: 4 (lower is better)
Translates to: AAPRAAGCPLLWLFLAYLGCLSH*FEPVAI
Trigger: TATGGCTACTGGTTCAAAGCAGTGACTGAGACAACC...CAAATAAGCAAGAAATAACCATAAAAGTGGGCAACCAGCAGCTCTAGGCGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp CTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCAGTACTGGGAGAGACGTaGCGTTCCCAAGGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: LGFGGIWLASLLQSVLSAVLGET*RSQGFP
Trigger: TGGAAAACCTTGGGAACGGCACGTCTCTCCCAGTAC...TGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp GGCCAACTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTATTGGAACTTGACTTCTaGATAATCCGCCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: GQLGFGGIWLASLLQSVLLELDF*IIRLGA
Trigger: GGCACCCAGGCGGATTATGCAGAAGTCAAGTTCCAA...TAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAGTTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp AAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACTCCTGTGACTTAGAATaGCTCCACTGTCTGAGAATG +
Preference number: 4 (lower is better)
Translates to: KRERERKREREGEKETLHSCDLE*LHCLRM
Trigger: CATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGA...GTGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp GGGTGGATTATTCATTCCTCCCCCTTTTGGGACATATCGGGTAACTTCCTGATGCCTAGAGCTGCTGGTTaGCCACTTTTATGGTTATTT +
Preference number: 4 (lower is better)
Translates to: GWIIHSSPFWDISGNFLMPRAAG*PLLWLF
Trigger: AAATAACCATAAAAGTGGGCAACCAGCAGCTCTAGG...CATCAGGAAGTTACCCGATATGTCCCAAAAGGGGGAGGAATGAATAATCCACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp AAAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCAATTCTGGGGCTTGAGTaGATGATTTGGGTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: KEREREKERERGREGNFAILGLE*MIWVLG
Trigger: TCCCAGAACCCAAATCATCCACTCAAGCCCCAGAAT...TGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR CCA 90 bp GGGTGGATTATTCATTCCTCCCCCTTTTGGGACATATCGGGTAACTTCCTGATGCAGATGGAGTTGCTCTaGTTTAAATGTCTGACAGCT +
Preference number: 4 (lower is better)
Translates to: GWIIHSSPFWDISGNFLMQMELL*FKCLTA
Trigger: AGCTGTCAGACATTTAAACCAGAGCAACTCCATCTG...CATCAGGAAGTTACCCGATATGTCCCAAAAGGGGGAGGAATGAATAATCCACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp GCAGCGCCTAGAGCTGCTGGTTGCCCACTTTTATGGTTATTTCTTGCTTATTTGTTGCTAAACAAGGGGTaGATTATTCATTCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: AAPRAAGCPLLWLFLAYLLLNKG*IIHSSP
Trigger: GGGGGAGGAATGAATAATCCACCCCTTGTTTAGCAA...CAAATAAGCAAGAAATAACCATAAAAGTGGGCAACCAGCAGCTCTAGGCGCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR TCA 90 bp GGCCAACTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTAAGAATGCCGTTGAGATaGGTCCCTTCTTATCTGGCA +
Preference number: 4 (lower is better)
Translates to: GQLGFGGIWLASLLQSVLRMPLR*VPSYLA
Trigger: TGCCAGATAAGAAGGGACTCATCTCAACGGCATTCT...TAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAGTTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339313.10
CDS-3UTR TCA 90 bp CTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCATGGGGCTTGAGTGGATaGTTTGGGTTCTGGGAAACT +
Preference number: 4 (lower is better)
Translates to: LGFGGIWLASLLQSVLSAWGLSG*FGFWET
Trigger: AGTTTCCCAGAACCCAAATCATCCACTCAAGCCCCA...TGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR TCA 90 bp CTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCATGGGATTCTGGGGCTTaGGTGGATGATTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: LGFGGIWLASLLQSVLSAWDSGA*VDDLGS
Trigger: AGAACCCAAATCATCCACTCAAGCCCCAGAATCCCA...TGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR TCA 90 bp TTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCAAAGTCTTTATGACCTGCTGGGGCCTGATGCATaGAATGAGCTTCAGACGCTG +
Preference number: 4 (lower is better)
Translates to: FGWLLYCNLFYQQSLYDLLGPDA*NELQTL
Trigger: CAGCGTCTGAAGCTCATTTCATGCATCAGGCCCCAG...CAGGTCATAAAGACTTTGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000353836.9
CDS-3UTR TCA 90 bp AAAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCAGTTGGAGAATGCCGTTaGGATGAGTCCCTTCTTATA +
Preference number: 4 (lower is better)
Translates to: KEREREKERERGREGNFAVGECR*DESLLI
Trigger: TATAAGAAGGGACTCATCTCAACGGCATTCTCCAAC...TGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR GCA 90 bp AAAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCAGGTTGTCTCAGTCACTaGTTTGAACCAGTAGCCATA +
Preference number: 4 (lower is better)
Translates to: KEREREKERERGREGNFAGCLSH*FEPVAI
Trigger: TATGGCTACTGGTTCAAAGCAGTGACTGAGACAACC...TGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR GCA 90 bp AAAGGAACAAAAGAATGGCTACTCCATAGACAAGAGCAGCGCCTAGAGCTGCTGGAGAGAAGGAAACTTTaGACTCTGTTATCTTCAACC +
Preference number: 4 (lower is better)
Translates to: KGTKEWLLHRQEQRLELLERRKL*TLLSST
Trigger: GGTTGAAGATAACAGAGTGCAAAGTTTCCTTCTCTC...CAGCAGCTCTAGGCGCTGCTCTTGTCTATGGAGTAGCCATTCTTTTGTTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp GGGTGGATTATTCATTCCTCCCCCTTTTGGGACATATCGGGTAACTTCCTGATGGAGAGAAGGAAACTTTaGACTCTGTTATCTTCAACC +
Preference number: 4 (lower is better)
Translates to: GWIIHSSPFWDISGNFLMERRKL*TLLSST
Trigger: GGTTGAAGATAACAGAGTGCAAAGTTTCCTTCTCTC...CATCAGGAAGTTACCCGATATGTCCCAAAAGGGGGAGGAATGAATAATCCACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp AAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACCCTAGAGCTGCTGGTTaGCCACTTTTATGGTTATTT +
Preference number: 4 (lower is better)
Translates to: KRERERKREREGEKETLHPRAAG*PLLWLF
Trigger: AAATAACCATAAAAGTGGGCAACCAGCAGCTCTAGG...GTGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp TTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCAAAGTCTTTATGACCTGTTGGGCTTCCAGGTATaGGACATTTCCCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: FGWLLYCNLFYQQSLYDLLGFQV*DISLGL
Trigger: CAGCCCCAGGGAAATGTCCCATACCTGGAAGCCCAA...CAGGTCATAAAGACTTTGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
CDS-3UTR CCA 90 bp AAAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCATGGGTTCTGGGAAACTaGGCAACTGATACTGCTTTT +
Preference number: 4 (lower is better)
Translates to: KEREREKERERGREGNFAWVLGN*ATDTAF
Trigger: AAAAGCAGTATCAGTTGCCCAGTTTCCCAGAACCCA...TGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR CCA 90 bp AAAGGAACAAAAGAATGGCTACTCCATAGACAAGAGCAGCGCCTAGAGCTGCTGAGCTCCTATTCCAGATaGAGTTGCTCTGGTTTAAAT +
Preference number: 4 (lower is better)
Translates to: KGTKEWLLHRQEQRLELLSSYSR*SCSGLN
Trigger: ATTTAAACCAGAGCAACTCCATCTGGAATAGGAGCT...CAGCAGCTCTAGGCGCTGCTCTTGTCTATGGAGTAGCCATTCTTTTGTTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp GCAGCGCCTAGAGCTGCTGGTTGCCCACTTTTATGGTTATTTCTTGCTTATTTGGGTTTTGGTGGGATTTaGTTGGCTTCTTTACTGCAA +
Preference number: 4 (lower is better)
Translates to: AAPRAAGCPLLWLFLAYLGFGGI*LASLLQ
Trigger: TTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACC...CAAATAAGCAAGAAATAACCATAAAAGTGGGCAACCAGCAGCTCTAGGCGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp GGCCAACTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTACTCTCGTGGCCAACTTaGTTTTGGTGGGATTTGGTT +
Preference number: 4 (lower is better)
Translates to: GQLGFGGIWLASLLQSVLLSWPT*FWWDLV
Trigger: AACCAAATCCCACCAAAACCAAGTTGGCCACGAGAG...TAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAGTTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp AAAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCATTGCTAAACAAGGGGTaGATTATTCATTCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: KEREREKERERGREGNFALLNKG*IIHSSP
Trigger: GGGGGAGGAATGAATAATCCACCCCTTGTTTAGCAA...TGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR CAA 72 bp CAGCCTCATTTTATTCAGCTCCTATTCCAGATGGAGTaGCTCTGGTTTAAATGTCTGACAGCTGGGACTACA +
Preference number: 4 (lower is better)
Translates to: QPHFIQLLFQME*LWFKCLTAGTT
Trigger: TGTAGTCCCAGCTGTCAGACATTTAAACCAGAGCAACTCCATCTGGAATAGGAGCTGAATAAAATGAGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR CAA 72 bp CACTCTCGTGGCCAACTTGGTTTTGGTGGGATTTGGTaGGCTTCTTTACTGCAATCTGTTTTATCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: HSRGQLGFGGIW*ASLLQSVLSAK
Trigger: CTTTGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAGTTGGCCACGAGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR TCA 90 bp GGGTGGATTATTCATTCCTCCCCCTTTTGGGACATATCGGGTAACTTCCTGATGAGAACCCATCGTTCATaGAATTATATCTCACATAGC +
Preference number: 4 (lower is better)
Translates to: GWIIHSSPFWDISGNFLMRTHRS*NYISHS
Trigger: GCTATGTGAGATATAATTTCATGAACGATGGGTTCT...CATCAGGAAGTTACCCGATATGTCCCAAAAGGGGGAGGAATGAATAATCCACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR TCA 90 bp TTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCAAAGTCTTTATGACCTGGGAAAAGAAGAGCCGTaGTGCCGATTCCCAGAAACG +
Preference number: 4 (lower is better)
Translates to: FGWLLYCNLFYQQSLYDLGKEEP*CRFPET
Trigger: CGTTTCTGGGAATCGGCATCACGGCTCTTCTTTTCC...CAGGTCATAAAGACTTTGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR TCA 90 bp CTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCAGGGAAACTGGGCAACTaGTACTGCTTTTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LGFGGIWLASLLQSVLSAGKLGN*YCFFWF
Trigger: GAACCAGAAAAAGCAGTATCAGTTGCCCAGTTTCCC...TGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR TCA 90 bp GGCCAACTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTAGTTGGAGAATGCCGTTaGGATGAGTCCCTTCTTATA +
Preference number: 4 (lower is better)
Translates to: GQLGFGGIWLASLLQSVLVGECR*DESLLI
Trigger: TATAAGAAGGGACTCATCTCAACGGCATTCTCCAAC...TAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAGTTGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp GGCCAACTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTAGGTTGTCTCAGTCACTaGTTTGAACCAGTAGCCATA +
Preference number: 4 (lower is better)
Translates to: GQLGFGGIWLASLLQSVLGCLSH*FEPVAI
Trigger: TATGGCTACTGGTTCAAAGCAGTGACTGAGACAACC...TAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAGTTGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp AAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACGAGAGAAGGAAACTTTaGACTCTGTTATCTTCAACC +
Preference number: 4 (lower is better)
Translates to: KRERERKREREGEKETLHERRKL*TLLSST
Trigger: GGTTGAAGATAACAGAGTGCAAAGTTTCCTTCTCTC...GTGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR GCA 90 bp GGCCAACTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCCTGTGACTTAGAATaGCTCCACTGTCTGAGAATG +
Preference number: 4 (lower is better)
Translates to: GQLGFGGIWLASLLQSVLSCDLE*LHCLRM
Trigger: CATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGA...TAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAGTTGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp TTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCAAAGTCTTTATGACCTGGAGTCCCTTCTTATCTaGCAGCTGCAGGATGGATCC +
Preference number: 4 (lower is better)
Translates to: FGWLLYCNLFYQQSLYDLESLLI*QLQDGS
Trigger: GGATCCATCCTGCAGCTGCCAGATAAGAAGGGACTC...CAGGTCATAAAGACTTTGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339313.10
CDS-3UTR CCA 90 bp CTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCAGAGGACTGTTTGGTGTaGCTTTCTGATTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: LGFGGIWLASLLQSVLSAEDCLV*LSDSAS
Trigger: AGAAGCGGAATCAGAAAGCCACACCAAACAGTCCTC...TGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp TTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCAAAGTCTTTATGACCTGGGTCCGAGGACTGTTTaGTGTGGCTTTCTGATTCCG +
Preference number: 4 (lower is better)
Translates to: FGWLLYCNLFYQQSLYDLGPRTV*CGFLIP
Trigger: CGGAATCAGAAAGCCACACCAAACAGTCCTCGGACC...CAGGTCATAAAGACTTTGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp AAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACAGCTCCTATTCCAGATaGAGTTGCTCTGGTTTAAAT +
Preference number: 4 (lower is better)
Translates to: KRERERKREREGEKETLHSSYSR*SCSGLN
Trigger: ATTTAAACCAGAGCAACTCCATCTGGAATAGGAGCT...GTGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp AAAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACCAACTTGGTTTTGGTaGGATTTGGTTGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: KEREREKERERGREGNFAPTWFW*DLVGFF
Trigger: AAAGAAGCCAACCAAATCCCACCAAAACCAAGTTGG...TGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp CTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCATGGCCAACTTGGTTTTaGTGGGATTTGGTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LGFGGIWLASLLQSVLSAWPTWF*WDLVGF
Trigger: GAAGCCAACCAAATCCCACCAAAACCAAGTTGGCCA...TGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
3UTR CAA 72 bp GAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTaGCACTCTGTTATCTTCAACCTCTTACTCTACCTT +
Preference number: 4 (lower is better)
Translates to: ERKREREGEKET*HSVIFNLLLYL
Trigger: AAGGTAGAGTAAGAGGTTGAAGATAACAGAGTGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR GCA 90 bp CTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCAGGTTGTCTCAGTCACTaGTTTGAACCAGTAGCCATA +
Preference number: 4 (lower is better)
Translates to: LGFGGIWLASLLQSVLSAGCLSH*FEPVAI
Trigger: TATGGCTACTGGTTCAAAGCAGTGACTGAGACAACC...TGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp GGCCAACTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTACCTAGAGCTGCTGGTTaGCCACTTTTATGGTTATTT +
Preference number: 4 (lower is better)
Translates to: GQLGFGGIWLASLLQSVLPRAAG*PLLWLF
Trigger: AAATAACCATAAAAGTGGGCAACCAGCAGCTCTAGG...TAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAGTTGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp CTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCATGGGTTCTGGGAAACTaGGCAACTGATACTGCTTTT +
Preference number: 4 (lower is better)
Translates to: LGFGGIWLASLLQSVLSAWVLGN*ATDTAF
Trigger: AAAAGCAGTATCAGTTGCCCAGTTTCCCAGAACCCA...TGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp GGCCAACTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTAGGTTTTGGTGGGATTTaGTTGGCTTCTTTACTGCAA +
Preference number: 4 (lower is better)
Translates to: GQLGFGGIWLASLLQSVLGFGGI*LASLLQ
Trigger: TTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACC...TAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAGTTGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp CTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCATTGCTAAACAAGGGGTaGATTATTCATTCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: LGFGGIWLASLLQSVLSALLNKG*IIHSSP
Trigger: GGGGGAGGAATGAATAATCCACCCCTTGTTTAGCAA...TGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp GGGTGGATTATTCATTCCTCCCCCTTTTGGGACATATCGGGTAACTTCCTGATGGGTTGCCCACTTTTATaGTTATTTCTTGCTTATTTG +
Preference number: 4 (lower is better)
Translates to: GWIIHSSPFWDISGNFLMGCPLL*LFLAYL
Trigger: CAAATAAGCAAGAAATAACCATAAAAGTGGGCAACC...CATCAGGAAGTTACCCGATATGTCCCAAAAGGGGGAGGAATGAATAATCCACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp AAAGGAACAAAAGAATGGCTACTCCATAGACAAGAGCAGCGCCTAGAGCTGCTGGGTTGCCCACTTTTATaGTTATTTCTTGCTTATTTG +
Preference number: 4 (lower is better)
Translates to: KGTKEWLLHRQEQRLELLGCPLL*LFLAYL
Trigger: CAAATAAGCAAGAAATAACCATAAAAGTGGGCAACC...CAGCAGCTCTAGGCGCTGCTCTTGTCTATGGAGTAGCCATTCTTTTGTTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR TCA 90 bp AAAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCAAGAACCCATCGTTCATaGAATTATATCTCACATAGC +
Preference number: 4 (lower is better)
Translates to: KEREREKERERGREGNFARTHRS*NYISHS
Trigger: GCTATGTGAGATATAATTTCATGAACGATGGGTTCT...TGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR TCA 90 bp TTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCAAAGTCTTTATGACCTGGGGAAACTGGGCAACTaGTACTGCTTTTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: FGWLLYCNLFYQQSLYDLGKLGN*YCFFWF
Trigger: GAACCAGAAAAAGCAGTATCAGTTGCCCAGTTTCCC...CAGGTCATAAAGACTTTGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR TCA 90 bp TTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCAAAGTCTTTATGACCTGTCTGGTTTAAATGTCTaGCAGCTGGGACTACAGGCA +
Preference number: 4 (lower is better)
Translates to: FGWLLYCNLFYQQSLYDLSGLNV*QLGLQA
Trigger: TGCCTGTAGTCCCAGCTGTCAGACATTTAAACCAGA...CAGGTCATAAAGACTTTGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp TTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCAAAGTCTTTATGACCTGATTCTGGGGCTTGAGTaGATGATTTGGGTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: FGWLLYCNLFYQQSLYDLILGLE*MIWVLG
Trigger: TCCCAGAACCCAAATCATCCACTCAAGCCCCAGAAT...CAGGTCATAAAGACTTTGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp CTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCACCAACTTGGTTTTGGTaGGATTTGGTTGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LGFGGIWLASLLQSVLSAPTWFW*DLVGFF
Trigger: AAAGAAGCCAACCAAATCCCACCAAAACCAAGTTGG...TGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp TTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCAAAGTCTTTATGACCTGCTCTCGTGGCCAACTTaGTTTTGGTGGGATTTGGTT +
Preference number: 4 (lower is better)
Translates to: FGWLLYCNLFYQQSLYDLLSWPT*FWWDLV
Trigger: AACCAAATCCCACCAAAACCAAGTTGGCCACGAGAG...CAGGTCATAAAGACTTTGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp AAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACGGTTGCCCACTTTTATaGTTATTTCTTGCTTATTTG +
Preference number: 4 (lower is better)
Translates to: KRERERKREREGEKETLHGCPLL*LFLAYL
Trigger: CAAATAAGCAAGAAATAACCATAAAAGTGGGCAACC...GTGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR TCA 90 bp GGCCAACTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTAAGAACCCATCGTTCATaGAATTATATCTCACATAGC +
Preference number: 4 (lower is better)
Translates to: GQLGFGGIWLASLLQSVLRTHRS*NYISHS
Trigger: GCTATGTGAGATATAATTTCATGAACGATGGGTTCT...TAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAGTTGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp CTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCAGAGAGAAGGAAACTTTaGACTCTGTTATCTTCAACC +
Preference number: 4 (lower is better)
Translates to: LGFGGIWLASLLQSVLSAERRKL*TLLSST
Trigger: GGTTGAAGATAACAGAGTGCAAAGTTTCCTTCTCTC...TGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp GGCCAACTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTAGGTTGGCTTCTTTACTaGAATCTGTTTTATCAGCAA +
Preference number: 4 (lower is better)
Translates to: GQLGFGGIWLASLLQSVLGWLLY*NLFYQQ
Trigger: TTGCTGATAAAACAGATTGCAGTAAAGAAGCCAACC...TAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAGTTGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp TTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCAAAGTCTTTATGACCTGTTGCTAAACAAGGGGTaGATTATTCATTCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: FGWLLYCNLFYQQSLYDLLLNKG*IIHSSP
Trigger: GGGGGAGGAATGAATAATCCACCCCTTGTTTAGCAA...CAGGTCATAAAGACTTTGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR TCA 90 bp CTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCAAGAACCCATCGTTCATaGAATTATATCTCACATAGC +
Preference number: 4 (lower is better)
Translates to: LGFGGIWLASLLQSVLSARTHRS*NYISHS
Trigger: GCTATGTGAGATATAATTTCATGAACGATGGGTTCT...TGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR GCA 90 bp TTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCAAAGTCTTTATGACCTGCCTAGAGCTGCTGGTTaGCCACTTTTATGGTTATTT +
Preference number: 4 (lower is better)
Translates to: FGWLLYCNLFYQQSLYDLPRAAG*PLLWLF
Trigger: AAATAACCATAAAAGTGGGCAACCAGCAGCTCTAGG...CAGGTCATAAAGACTTTGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CCA 90 bp GGCCAACTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTAGGTTGCCCACTTTTATaGTTATTTCTTGCTTATTTG +
Preference number: 4 (lower is better)
Translates to: GQLGFGGIWLASLLQSVLGCPLL*LFLAYL
Trigger: CAAATAAGCAAGAAATAACCATAAAAGTGGGCAACC...TAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAGTTGGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CAA 90 bp AGGCTGGTCTCGAACTCCCGACCTCAGGCGATCTGCCCACCTCAACCTCCCAAATCCGCCTGGGTGCCCTaGGGCATCCGGGCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: RLVSNSRPQAICPPQPPKSAWVP*GIRASG
Trigger: GCCTGAGGCCCGGATGCCCAAGGGCACCCAGGCGGA...TTTGGGAGGTTGAGGTGGGCAGATCGCCTGAGGTCGGGAGTTCGAGACCAGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS CCA 90 bp GGGAGGGAGCACCTGGTGGAAGAGGGGTCCGAGGACTGTTTGGTGTaGCTTTCTGATTCCGCTTCTGAGCCAGGGGGCCAGCCGTCGGGA +
Preference number: 5 (lower is better)
Translates to: GREHLVEEGSEDCLV*LSDSASEPGGQPSG
Trigger: TCCCGACGGCTGGCCCCCTGGCTCAGAAGCGGAATCAGAAAGCCACACCAAACAGTCCTCGGACCCCTCTTCCACCAGGTGCTCCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000357375.4
ENST00000436984.6
ENST00000439889.6
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS TCA 90 bp TCTGATTCCGCTTCTGAGCCAGGGGGCCAGCCGTCGGGACCACATTaGTGTAATCCAGGATCGTGCTGTGCCGGGAGAACCTGGGCCTCG +
Preference number: 5 (lower is better)
Translates to: SDSASEPGGQPSGPH*CNPGSCCAGRTWAS
Trigger: CGAGGCCCAGGTTCTCCCGGCACAGCACGATCCTGGATTACATCAATGTGGTCCCGACGGCTGGCCCCCTGGCTCAGAAGCGGAATCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000357375.4
ENST00000436984.6
ENST00000439889.6
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR CAA 90 bp TACGGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGTCCGCCTGGGTGCCCTaGGGCATCCGGGCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: YGPPVSSCDLECLHCLRMSAWVP*GIRASG
Trigger: GCCTGAGGCCCGGATGCCCAAGGGCACCCAGGCGGA...CATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCCGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS TCA 90 bp GAAGCTGAGCCCTGGGGCCTGATGCATGAAATGAGCTTCAGACGCTaGGCTCACAGAACTCCTTTGCCTTCCCCCACACTCTCCGGCCCA +
Preference number: 5 (lower is better)
Translates to: EAEPWGLMHEMSFRR*AHRTPLPSPTLSGP
Trigger: TGGGCCGGAGAGTGTGGGGGAAGGCAAAGGAGTTCTGTGAGCTCAGCGTCTGAAGCTCATTTCATGCATCAGGCCCCAGGGCTCAGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000353836.9
CDS-3UTR CAA 90 bp AGGCTGGTCTCGAACTCCCGACCTCAGGCGATCTGCCCACCTCAACCTCCCAAACCCAGAAACGCTCCGTaGGAGAATGCCGTTGAGATG +
Preference number: 5 (lower is better)
Translates to: RLVSNSRPQAICPPQPPKPRNAP*ENAVEM
Trigger: CATCTCAACGGCATTCTCCAACGGAGCGTTTCTGGG...TTTGGGAGGTTGAGGTGGGCAGATCGCCTGAGGTCGGGAGTTCGAGACCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS GCA 90 bp GTCCCAGTCCTAAAGCCTAAGAGACCCTCATTGGAACTTGACTTCTaGATAATCCGCCTGGGTGCCCTTGGGCATCCGGGCCTCAGGCCT +
Preference number: 5 (lower is better)
Translates to: VPVLKPKRPSLELDF*IIRLGALGHPGLRP
Trigger: AGGCCTGAGGCCCGGATGCCCAAGGGCACCCAGGCGGATTATGCAGAAGTCAAGTTCCAATGAGGGTCTCTTAGGCTTTAGGACTGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000357375.4
ENST00000436984.6
ENST00000439889.6
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR CAA 90 bp AAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACTCCGCCTGGGTGCCCTaGGGCATCCGGGCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: KRERERKREREGEKETLHSAWVP*GIRASG
Trigger: GCCTGAGGCCCGGATGCCCAAGGGCACCCAGGCGGA...GTGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR CAA 90 bp AGGCTGGTCTCGAACTCCCGACCTCAGGCGATCTGCCCACCTCAACCTCCCAAATGCAATGGTGTGATCTaGGCTCACTGCAACCTCCGT +
Preference number: 5 (lower is better)
Translates to: RLVSNSRPQAICPPQPPKCNGVI*AHCNLR
Trigger: ACGGAGGTTGCAGTGAGCCAAGATCACACCATTGCA...TTTGGGAGGTTGAGGTGGGCAGATCGCCTGAGGTCGGGAGTTCGAGACCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CAA 90 bp CTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCATCCGCCTGGGTGCCCTaGGGCATCCGGGCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: LGFGGIWLASLLQSVLSASAWVP*GIRASG
Trigger: GCCTGAGGCCCGGATGCCCAAGGGCACCCAGGCGGA...TGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CAA 90 bp AGGCTGGTCTCGAACTCCCGACCTCAGGCGATCTGCCCACCTCAACCTCCCAAACCTAAGAGACCCTCATaGGAACTTGACTTCTGCATA +
Preference number: 5 (lower is better)
Translates to: RLVSNSRPQAICPPQPPKPKRPS*ELDFCI
Trigger: TATGCAGAAGTCAAGTTCCAATGAGGGTCTCTTAGG...TTTGGGAGGTTGAGGTGGGCAGATCGCCTGAGGTCGGGAGTTCGAGACCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR CAA 90 bp TACGGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGGCCACAGGAGCACCCTaGGTTGTCTCAGTCACTGCT +
Preference number: 5 (lower is better)
Translates to: YGPPVSSCDLECLHCLRMATGAP*VVSVTA
Trigger: AGCAGTGACTGAGACAACCAAGGGTGCTCCTGTGGC...CATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCCGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CAA 90 bp GGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGCAGGGGTCCGAGGACTGTTaGGTGTGGCTTTCTGATTCC +
Preference number: 5 (lower is better)
Translates to: GPPVSSCDLECLHCLRMQGSEDC*VWLSDS
Trigger: GGAATCAGAAAGCCACACCAAACAGTCCTCGGACCC...CTGCATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CAA 90 bp AGGCTGGTCTCGAACTCCCGACCTCAGGCGATCTGCCCACCTCAACCTCCCAAATTTGGTGGGATTTGGTaGGCTTCTTTACTGCAATCT +
Preference number: 5 (lower is better)
Translates to: RLVSNSRPQAICPPQPPKFGGIW*ASLLQS
Trigger: AGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAA...TTTGGGAGGTTGAGGTGGGCAGATCGCCTGAGGTCGGGAGTTCGAGACCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CAA 90 bp AAAGGAACAAAAGAATGGCTACTCCATAGACAAGAGCAGCGCCTAGAGCTGCTGGCCACAGGAGCACCCTaGGTTGTCTCAGTCACTGCT +
Preference number: 5 (lower is better)
Translates to: KGTKEWLLHRQEQRLELLATGAP*VVSVTA
Trigger: AGCAGTGACTGAGACAACCAAGGGTGCTCCTGTGGC...CAGCAGCTCTAGGCGCTGCTCTTGTCTATGGAGTAGCCATTCTTTTGTTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CAA 90 bp TACGGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGCCCAGAAACGCTCCGTaGGAGAATGCCGTTGAGATG +
Preference number: 5 (lower is better)
Translates to: YGPPVSSCDLECLHCLRMPRNAP*ENAVEM
Trigger: CATCTCAACGGCATTCTCCAACGGAGCGTTTCTGGG...CATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCCGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CAA 90 bp AAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACGCCACAGGAGCACCCTaGGTTGTCTCAGTCACTGCT +
Preference number: 5 (lower is better)
Translates to: KRERERKREREGEKETLHATGAP*VVSVTA
Trigger: AGCAGTGACTGAGACAACCAAGGGTGCTCCTGTGGC...GTGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR CAA 90 bp AAAGGAACAAAAGAATGGCTACTCCATAGACAAGAGCAGCGCCTAGAGCTGCTGGGGTCCGAGGACTGTTaGGTGTGGCTTTCTGATTCC +
Preference number: 5 (lower is better)
Translates to: KGTKEWLLHRQEQRLELLGSEDC*VWLSDS
Trigger: GGAATCAGAAAGCCACACCAAACAGTCCTCGGACCC...CAGCAGCTCTAGGCGCTGCTCTTGTCTATGGAGTAGCCATTCTTTTGTTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CAA 90 bp GCAGCGCCTAGAGCTGCTGGTTGCCCACTTTTATGGTTATTTCTTGCTTATTTGAGAAGTGGGAGGTCGTaGGTTTGGTTCCTTGGGAGG +
Preference number: 5 (lower is better)
Translates to: AAPRAAGCPLLWLFLAYLRSGRS*VWFLGR
Trigger: CCTCCCAAGGAACCAAACCAACGACCTCCCACTTCT...CAAATAAGCAAGAAATAACCATAAAAGTGGGCAACCAGCAGCTCTAGGCGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339313.10
ENST00000353836.9
CDS-3UTR CAA 90 bp GCAGCGCCTAGAGCTGCTGGTTGCCCACTTTTATGGTTATTTCTTGCTTATTTGCCCAGAAACGCTCCGTaGGAGAATGCCGTTGAGATG +
Preference number: 5 (lower is better)
Translates to: AAPRAAGCPLLWLFLAYLPRNAP*ENAVEM
Trigger: CATCTCAACGGCATTCTCCAACGGAGCGTTTCTGGG...CAAATAAGCAAGAAATAACCATAAAAGTGGGCAACCAGCAGCTCTAGGCGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CAA 90 bp AAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACGGGTCCGAGGACTGTTaGGTGTGGCTTTCTGATTCC +
Preference number: 5 (lower is better)
Translates to: KRERERKREREGEKETLHGSEDC*VWLSDS
Trigger: GGAATCAGAAAGCCACACCAAACAGTCCTCGGACCC...GTGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR CAA 90 bp GGGTGGATTATTCATTCCTCCCCCTTTTGGGACATATCGGGTAACTTCCTGATGTGCAATGGTGTGATCTaGGCTCACTGCAACCTCCGT +
Preference number: 5 (lower is better)
Translates to: GWIIHSSPFWDISGNFLMCNGVI*AHCNLR
Trigger: ACGGAGGTTGCAGTGAGCCAAGATCACACCATTGCA...CATCAGGAAGTTACCCGATATGTCCCAAAAGGGGGAGGAATGAATAATCCACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS CCA 90 bp CCTGGGATTCTGGGGCTTGAGTGGATGATTTGGGTTCTGGGAAACTaGGCAACTGATACTGCTTTTTCTGGTTCTTCTTTGATTCTGGGG +
Preference number: 5 (lower is better)
Translates to: PGILGLEWMIWVLGN*ATDTAFSGSSLILG
Trigger: CCCCAGAATCAAAGAAGAACCAGAAAAAGCAGTATCAGTTGCCCAGTTTCCCAGAACCCAAATCATCCACTCAAGCCCCAGAATCCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000357375.4
ENST00000436984.6
ENST00000439889.6
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR CAA 90 bp AAAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACCCAGAAACGCTCCGTaGGAGAATGCCGTTGAGATG +
Preference number: 5 (lower is better)
Translates to: KEREREKERERGREGNFAPRNAP*ENAVEM
Trigger: CATCTCAACGGCATTCTCCAACGGAGCGTTTCTGGG...TGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR CAA 90 bp AAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACTGCAATGGTGTGATCTaGGCTCACTGCAACCTCCGT +
Preference number: 5 (lower is better)
Translates to: KRERERKREREGEKETLHCNGVI*AHCNLR
Trigger: ACGGAGGTTGCAGTGAGCCAAGATCACACCATTGCA...GTGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CAA 90 bp GGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGCAGTGGTTTTGGTGGGATTaGGTTGGCTTCTTTACTGCA +
Preference number: 5 (lower is better)
Translates to: GPPVSSCDLECLHCLRMQWFWWD*VGFFTA
Trigger: TGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCA...CTGCATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CAA 90 bp CTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCAGCCACAGGAGCACCCTaGGTTGTCTCAGTCACTGCT +
Preference number: 5 (lower is better)
Translates to: LGFGGIWLASLLQSVLSAATGAP*VVSVTA
Trigger: AGCAGTGACTGAGACAACCAAGGGTGCTCCTGTGGC...TGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CAA 90 bp GGCCAACTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTACCCAGAAACGCTCCGTaGGAGAATGCCGTTGAGATG +
Preference number: 5 (lower is better)
Translates to: GQLGFGGIWLASLLQSVLPRNAP*ENAVEM
Trigger: CATCTCAACGGCATTCTCCAACGGAGCGTTTCTGGG...TAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAGTTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CAA 90 bp TACGGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTCCACTGTCTGAGAATGTTTGGTGGGATTTGGTaGGCTTCTTTACTGCAATCT +
Preference number: 5 (lower is better)
Translates to: YGPPVSSCDLECLHCLRMFGGIW*ASLLQS
Trigger: AGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAA...CATTCTCAGACAGTGGAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCCGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CAA 90 bp AAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACCCTAAGAGACCCTCATaGGAACTTGACTTCTGCATA +
Preference number: 5 (lower is better)
Translates to: KRERERKREREGEKETLHPKRPS*ELDFCI
Trigger: TATGCAGAAGTCAAGTTCCAATGAGGGTCTCTTAGG...GTGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR CAA 90 bp AAAGGAACAAAAGAATGGCTACTCCATAGACAAGAGCAGCGCCTAGAGCTGCTGCTATTCCAGATGGAGTaGCTCTGGTTTAAATGTCTG +
Preference number: 5 (lower is better)
Translates to: KGTKEWLLHRQEQRLELLLFQME*LWFKCL
Trigger: CAGACATTTAAACCAGAGCAACTCCATCTGGAATAG...CAGCAGCTCTAGGCGCTGCTCTTGTCTATGGAGTAGCCATTCTTTTGTTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CAA 90 bp TTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCAAAGTCTTTATGACCTGGGGTCCGAGGACTGTTaGGTGTGGCTTTCTGATTCC +
Preference number: 5 (lower is better)
Translates to: FGWLLYCNLFYQQSLYDLGSEDC*VWLSDS
Trigger: GGAATCAGAAAGCCACACCAAACAGTCCTCGGACCC...CAGGTCATAAAGACTTTGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CAA 90 bp AAAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACCTAAGAGACCCTCATaGGAACTTGACTTCTGCATA +
Preference number: 5 (lower is better)
Translates to: KEREREKERERGREGNFAPKRPS*ELDFCI
Trigger: TATGCAGAAGTCAAGTTCCAATGAGGGTCTCTTAGG...TGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR CAA 90 bp AAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCACCTATTCCAGATGGAGTaGCTCTGGTTTAAATGTCTG +
Preference number: 5 (lower is better)
Translates to: KRERERKREREGEKETLHLFQME*LWFKCL
Trigger: CAGACATTTAAACCAGAGCAACTCCATCTGGAATAG...GTGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CAA 90 bp AAAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGGGAGAGAAGGAAACTTTGCAGGAGAGAAGGAAACTTaGCACTCTGTTATCTTCAAC +
Preference number: 5 (lower is better)
Translates to: KEREREKERERGREGNFAGEKET*HSVIFN
Trigger: GTTGAAGATAACAGAGTGCAAAGTTTCCTTCTCTCC...TGCAAAGTTTCCTTCTCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS-3UTR CAA 90 bp GGCCAACTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTATGGTTTTGGTGGGATTaGGTTGGCTTCTTTACTGCA +
Preference number: 5 (lower is better)
Translates to: GQLGFGGIWLASLLQSVLWFWWD*VGFFTA
Trigger: TGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCA...TAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAGTTGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CAA 90 bp GGCCAACTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTAGGAGAGAAGGAAACTTaGCACTCTGTTATCTTCAAC +
Preference number: 5 (lower is better)
Translates to: GQLGFGGIWLASLLQSVLGEKET*HSVIFN
Trigger: GTTGAAGATAACAGAGTGCAAAGTTTCCTTCTCTCC...TAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAGTTGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CAA 90 bp CTTGGTTTTGGTGGGATTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCATTTGGTGGGATTTGGTaGGCTTCTTTACTGCAATCT +
Preference number: 5 (lower is better)
Translates to: LGFGGIWLASLLQSVLSAFGGIW*ASLLQS
Trigger: AGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAA...TGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CAA 90 bp TTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCAAAGTCTTTATGACCTGTGGTTTTGGTGGGATTaGGTTGGCTTCTTTACTGCA +
Preference number: 5 (lower is better)
Translates to: FGWLLYCNLFYQQSLYDLWFWWD*VGFFTA
Trigger: TGCAGTAAAGAAGCCAACCAAATCCCACCAAAACCA...CAGGTCATAAAGACTTTGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CAA 90 bp TTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCAAAGTCTTTATGACCTGCTATTCCAGATGGAGTaGCTCTGGTTTAAATGTCTG +
Preference number: 5 (lower is better)
Translates to: FGWLLYCNLFYQQSLYDLLFQME*LWFKCL
Trigger: CAGACATTTAAACCAGAGCAACTCCATCTGGAATAG...CAGGTCATAAAGACTTTGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS-3UTR CAA 90 bp TTTGGTTGGCTTCTTTACTGCAATCTGTTTTATCAGCAAAGTCTTTATGACCTGTTTGGTGGGATTTGGTaGGCTTCTTTACTGCAATCT +
Preference number: 5 (lower is better)
Translates to: FGWLLYCNLFYQQSLYDLFGGIW*ASLLQS
Trigger: AGATTGCAGTAAAGAAGCCAACCAAATCCCACCAAA...CAGGTCATAAAGACTTTGCTGATAAAACAGATTGCAGTAAAGAAGCCAACCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000441969.7
ENST00000442846.7
CDS TCA 72 bp GCTTCTGAGCCAGGGGGCCAGCCGTCGGGACCACATTaGTGTAATCCAGGATCGTGCTGTGCCGGGAGAACC +
Preference number: 6 (lower is better)
Translates to: ASEPGGQPSGPH*CNPGSCCAGRT
Trigger: GGTTCTCCCGGCACAGCACGATCCTGGATTACATCAATGTGGTCCCGACGGCTGGCCCCCTGGCTCAGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000357375.4
ENST00000436984.6
ENST00000439889.6
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS CCA 72 bp CACCTGGTGGAAGAGGGGTCCGAGGACTGTTTGGTGTaGCTTTCTGATTCCGCTTCTGAGCCAGGGGGCCAG +
Preference number: 6 (lower is better)
Translates to: HLVEEGSEDCLV*LSDSASEPGGQ
Trigger: CTGGCCCCCTGGCTCAGAAGCGGAATCAGAAAGCCACACCAAACAGTCCTCGGACCCCTCTTCCACCAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000357375.4
ENST00000436984.6
ENST00000439889.6
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS CCA 72 bp GGGAGCACCTGGTGGAAGAGGGGTCCGAGGACTGTTTaGTGTGGCTTTCTGATTCCGCTTCTGAGCCAGGGG +
Preference number: 6 (lower is better)
Translates to: GSTWWKRGPRTV*CGFLIPLLSQG
Trigger: CCCCTGGCTCAGAAGCGGAATCAGAAAGCCACACCAAACAGTCCTCGGACCCCTCTTCCACCAGGTGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000357375.4
ENST00000436984.6
ENST00000439889.6
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS CAA 72 bp AGGGAGCACCTGGTGGAAGAGGGGTCCGAGGACTGTTaGGTGTGGCTTTCTGATTCCGCTTCTGAGCCAGGG +
Preference number: 6 (lower is better)
Translates to: REHLVEEGSEDC*VWLSDSASEPG
Trigger: CCCTGGCTCAGAAGCGGAATCAGAAAGCCACACCAAACAGTCCTCGGACCCCTCTTCCACCAGGTGCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000357375.4
ENST00000436984.6
ENST00000439889.6
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS TCA 72 bp CCCTGGGGCCTGATGCATGAAATGAGCTTCAGACGCTaGGCTCACAGAACTCCTTTGCCTTCCCCCACACTC +
Preference number: 6 (lower is better)
Translates to: PWGLMHEMSFRR*AHRTPLPSPTL
Trigger: GAGTGTGGGGGAAGGCAAAGGAGTTCTGTGAGCTCAGCGTCTGAAGCTCATTTCATGCATCAGGCCCCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000353836.9
CDS GCA 72 bp CTAAAGCCTAAGAGACCCTCATTGGAACTTGACTTCTaGATAATCCGCCTGGGTGCCCTTGGGCATCCGGGC +
Preference number: 6 (lower is better)
Translates to: LKPKRPSLELDF*IIRLGALGHPG
Trigger: GCCCGGATGCCCAAGGGCACCCAGGCGGATTATGCAGAAGTCAAGTTCCAATGAGGGTCTCTTAGGCTTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000357375.4
ENST00000436984.6
ENST00000439889.6
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS CAA 90 bp TCCTCCCTAGCCGAAGTCCCAGTCCTAAAGCCTAAGAGACCCTCATaGGAACTTGACTTCTGCATAATCCGCCTGGGTGCCCTTGGGCAT +
Preference number: 6 (lower is better)
Translates to: SSLAEVPVLKPKRPS*ELDFCIIRLGALGH
Trigger: ATGCCCAAGGGCACCCAGGCGGATTATGCAGAAGTCAAGTTCCAATGAGGGTCTCTTAGGCTTTAGGACTGGGACTTCGGCTAGGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339313.10
ENST00000353836.9
ENST00000357375.4
ENST00000436984.6
ENST00000439889.6
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS TCA 72 bp GCCGATTCCCAGAAACGCTCCGTTGGAGAATGCCGTTaGGATGAGTCCCTTCTTATCTGGCAGCTGCAGGAT +
Preference number: 6 (lower is better)
Translates to: ADSQKRSVGECR*DESLLIWQLQD
Trigger: ATCCTGCAGCTGCCAGATAAGAAGGGACTCATCTCAACGGCATTCTCCAACGGAGCGTTTCTGGGAATCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339313.10
ENST00000357375.4
ENST00000439889.6
CDS TCA 72 bp GCCGATTCCCAGAAACGCTCCGTTGGAGAATGCCGTTaGGATGAGTCCCTTCTTATAGTGCACGGAGAGGCT +
Preference number: 6 (lower is better)
Translates to: ADSQKRSVGECR*DESLLIVHGEA
Trigger: AGCCTCTCCGTGCACTATAAGAAGGGACTCATCTCAACGGCATTCTCCAACGGAGCGTTTCTGGGAATCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353836.9
ENST00000436984.6
ENST00000441969.7
ENST00000442846.7
ENST00000525998.5
CDS CAA 90 bp CAGAGGAAAAGAAGAGCCGTGATGCCGATTCCCAGAAACGCTCCGTaGGAGAATGCCGTTGAGATGAGTCCCTTCTTATCTGGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: QRKRRAVMPIPRNAP*ENAVEMSPFLSGSC
Trigger: GCAGCTGCCAGATAAGAAGGGACTCATCTCAACGGCATTCTCCAACGGAGCGTTTCTGGGAATCGGCATCACGGCTCTTCTTTTCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339313.10
ENST00000357375.4
ENST00000439889.6
CDS TCA 72 bp TTCCCAGAAACGCTCCGTTGGAGAATGCCGTTGAGATaGGTCCCTTCTTATCTGGCAGCTGCAGGATGGATC +
Preference number: 6 (lower is better)
Translates to: FPETLRWRMPLR*VPSYLAAAGWI
Trigger: GATCCATCCTGCAGCTGCCAGATAAGAAGGGACTCATCTCAACGGCATTCTCCAACGGAGCGTTTCTGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339313.10
ENST00000357375.4
ENST00000439889.6
CDS CAA 72 bp AGAAGAGCCGTGATGCCGATTCCCAGAAACGCTCCGTaGGAGAATGCCGTTGAGATGAGTCCCTTCTTATCT +
Preference number: 6 (lower is better)
Translates to: RRAVMPIPRNAP*ENAVEMSPFLS
Trigger: AGATAAGAAGGGACTCATCTCAACGGCATTCTCCAACGGAGCGTTTCTGGGAATCGGCATCACGGCTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339313.10
ENST00000357375.4
ENST00000439889.6