RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SIGLEC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000088827

Ensembl transcript IDs: ENST00000344754.6, ENST00000419548.4

Found 703 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCACCGAATTCTCGCCCATGCTCTGCTTACAAACACGCCTCCTTCTaGAAGGCCCGGAGTGGACTCAGAGAGCCTCTCCCCTCCCCACCT +
Preference number: 1 (lower is better)
Translates to: PPNSRPCSAYKHASF*KARSGLREPLPSPP
Trigger: AGGTGGGGAGGGGAGAGGCTCTCTGAGTCCACTCCGGGCCTTGCAGAAGGAGGCGTGTTTGTAAGCAGAGCATGGGCGAGAATTCGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR TCA 90 bp GAGGGCAGGCAACACCACTGGTCAGCCCAGGGGTGGGGCACAGGTTaGGGTCTCACATGTGGCTGCATCAGGATCAATGAGCTTCCCACA +
Preference number: 1 (lower is better)
Translates to: EGRQHHWSAQGWGTG*GLTCGCIRINELPT
Trigger: TGTGGGAAGCTCATTGATCCTGATGCAGCCACATGTGAGACCTCAACCTGTGCCCCACCCCTGGGCTGACCAGTGGTGTTGCCTGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR CCA 90 bp GCTCCCCACAGGCTGGCTCCAGACCACAAGAGCGTGGGAACCTCATaGAGAGTGGGTGCTTCCTCTGTCTTCCTCCCTAGCCCTTGCTTT +
Preference number: 1 (lower is better)
Translates to: APHRLAPDHKSVGTS*RVGASSVFLPSPCF
Trigger: AAAGCAAGGGCTAGGGAGGAAGACAGAGGAAGCACCCACTCTCCATGAGGTTCCCACGCTCTTGTGGTCTGGAGCCAGCCTGTGGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR CCA 90 bp GCCCACAACCAGAATGGCCAGGGGCACACCCTGGCCCTCAGTAGATaGGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCAACAA +
Preference number: 1 (lower is better)
Translates to: AHNQNGQGHTLALSR*ALRQNMACWWHSQQ
Trigger: TTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACTGAGGGCCAGGGTGTGCCCCTGGCCATTCTGGTTGTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR TCA 90 bp ACACTCTCCCCAACCTCCCCTTGGTCCCAGGCACCATCCTCTAAATaGCAGCAGTCTCCAGATGCCAGTTGGCACTGTGGGTTAGCTGGG +
Preference number: 1 (lower is better)
Translates to: TLSPTSPWSQAPSSK*QQSPDASWHCGLAG
Trigger: CCCAGCTAACCCACAGTGCCAACTGGCATCTGGAGACTGCTGTCATTTAGAGGATGGTGCCTGGGACCAAGGGGAGGTTGGGGAGAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR TCA 90 bp GTGGGGCACAGGTTGAGGTCTCACATGTGGCTGCATCAGGATCAATaGGCTTCCCACAGAGAAAACCCTGGTCACAGGAGGCCTCTGGGA +
Preference number: 1 (lower is better)
Translates to: VGHRLRSHMWLHQDQ*ASHRENPGHRRPLG
Trigger: TCCCAGAGGCCTCCTGTGACCAGGGTTTTCTCTGTGGGAAGCTCATTGATCCTGATGCAGCCACATGTGAGACCTCAACCTGTGCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR CCA 90 bp GTGGAAAAGTCCTGTGCAGCTTCTGAGTTGCGTCCACCATGGGCATaGGTGTGCTTCTACCTCCACTCTTCCTTCTTCTGGCTGGAGGGC +
Preference number: 1 (lower is better)
Translates to: VEKSCAASELRPPWA*VCFYLHSSFFWLEG
Trigger: GCCCTCCAGCCAGAAGAAGGAAGAGTGGAGGTAGAAGCACACCCATGCCCATGGTGGACGCAACTCAGAAGCTGCACAGGACTTTTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR CCA 90 bp AGGCTGCAGGGGGAGTCACTAGCCCACTCAAGAGCTCTCTCCTGTTaGTCCCTGATTCGCAGGGGCACGTCATTCCTTCTTGGTAACTCA +
Preference number: 1 (lower is better)
Translates to: RLQGESLAHSRALSC*SLIRRGTSFLLGNS
Trigger: TGAGTTACCAAGAAGGAATGACGTGCCCCTGCGAATCAGGGACCAACAGGAGAGAGCTCTTGAGTGGGCTAGTGACTCCCCCTGCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR TCA 90 bp ACCAGAATGGCCAGGGGCACACCCTGGCCCTCAGTAGATGGGCACTaGGACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCAAA +
Preference number: 1 (lower is better)
Translates to: TRMARGTPWPSVDGH*DKTWPAGGIPNNVK
Trigger: TTTGACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACTGAGGGCCAGGGTGTGCCCCTGGCCATTCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR GCA 90 bp GCGTGGTCTCTTTCTGAAAAGCCATCTCCACCGAATTCTCGCCCATaGTCTGCTTACAAACACGCCTCCTTCTGCAAGGCCCGGAGTGGA +
Preference number: 1 (lower is better)
Translates to: AWSLSEKPSPPNSRP*SAYKHASFCKARSG
Trigger: TCCACTCCGGGCCTTGCAGAAGGAGGCGTGTTTGTAAGCAGAGCATGGGCGAGAATTCGGTGGAGATGGCTTTTCAGAAAGAGACCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR TCA 90 bp TACTCCAGCCAATGGGAAGTGAGTGGAAAAGTCCTGTGCAGCTTCTaGGTTGCGTCCACCATGGGCATGGGTGTGCTTCTACCTCCACTC +
Preference number: 1 (lower is better)
Translates to: YSSQWEVSGKVLCSF*VASTMGMGVLLPPL
Trigger: GAGTGGAGGTAGAAGCACACCCATGCCCATGGTGGACGCAACTCAGAAGCTGCACAGGACTTTTCCACTCACTTCCCATTGGCTGGAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR GCA 90 bp CAGCCAATGGGAAGTGAGTGGAAAAGTCCTGTGCAGCTTCTGAGTTaGGTCCACCATGGGCATGGGTGTGCTTCTACCTCCACTCTTCCT +
Preference number: 1 (lower is better)
Translates to: QPMGSEWKSPVQLLS*VHHGHGCASTSTLP
Trigger: AGGAAGAGTGGAGGTAGAAGCACACCCATGCCCATGGTGGACGCAACTCAGAAGCTGCACAGGACTTTTCCACTCACTTCCCATTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR CCA 90 bp AACACTGCCTCATTCACATTCATAGGCTGGAGTCATCACAGATTCTaGCCACTTTCTCCTCCGGAGGGCAGGCAACACCACTGGTCAGCC +
Preference number: 1 (lower is better)
Translates to: NTASFTFIGWSHHRF*PLSPPEGRQHHWSA
Trigger: GGCTGACCAGTGGTGTTGCCTGCCCTCCGGAGGAGAAAGTGGCCAGAATCTGTGATGACTCCAGCCTATGAATGTGAATGAGGCAGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR GCA 90 bp AGATGTCACAGAGCTGTTTTCGTAGAGGCGGGCAGGACTCAACACTaGCTCATTCACATTCATAGGCTGGAGTCATCACAGATTCTGGCC +
Preference number: 1 (lower is better)
Translates to: RCHRAVFVEAGRTQH*LIHIHRLESSQILA
Trigger: GGCCAGAATCTGTGATGACTCCAGCCTATGAATGTGAATGAGGCAGTGTTGAGTCCTGCCCGCCTCTACGAAAACAGCTCTGTGACATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR CCA 90 bp AGCTGGGTATTATATCTGCCCGTGTGTGTTGAATGGATACCTGCGTaGTCTCTTTCTGAAAAGCCATCTCCACCGAATTCTCGCCCATGC +
Preference number: 1 (lower is better)
Translates to: SWVLYLPVCVEWIPA*SLSEKPSPPNSRPC
Trigger: GCATGGGCGAGAATTCGGTGGAGATGGCTTTTCAGAAAGAGACCACGCAGGTATCCATTCAACACACACGGGCAGATATAATACCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR GCA 90 bp TCTCCAGATGCCAGTTGGCACTGTGGGTTAGCTGGGTATTATATCTaGCCGTGTGTGTTGAATGGATACCTGCGTGGTCTCTTTCTGAAA +
Preference number: 1 (lower is better)
Translates to: SPDASWHCGLAGYYI*PCVLNGYLRGLFLK
Trigger: TTTCAGAAAGAGACCACGCAGGTATCCATTCAACACACACGGGCAGATATAATACCCAGCTAACCCACAGTGCCAACTGGCATCTGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR CCA 90 bp GCACTGTGGGTTAGCTGGGTATTATATCTGCCCGTGTGTGTTGAATaGATACCTGCGTGGTCTCTTTCTGAAAAGCCATCTCCACCGAAT +
Preference number: 1 (lower is better)
Translates to: ALWVSWVLYLPVCVE*IPAWSLSEKPSPPN
Trigger: ATTCGGTGGAGATGGCTTTTCAGAAAGAGACCACGCAGGTATCCATTCAACACACACGGGCAGATATAATACCCAGCTAACCCACAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR CCA 90 bp ACTGGTCAGCCCAGGGGTGGGGCACAGGTTGAGGTCTCACATGTGGCTGCATCACCGCTCCCCACAGGCTaGCTCCAGACCACAAGAGCG +
Preference number: 2 (lower is better)
Translates to: TGQPRGGAQVEVSHVAASPLPTG*LQTTRA
Trigger: CGCTCTTGTGGTCTGGAGCCAGCCTGTGGGGAGCGG...TGATGCAGCCACATGTGAGACCTCAACCTGTGCCCCACCCCTGGGCTGACCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR GCA 90 bp GAGGGTGCGGCCTCGGCTACACAAAGTTCACCCGCCCCCAACTGCCTCCCAGCGTCTGAGGATGCAGGATaGTGCAATCCAACCAAAGTC +
Preference number: 2 (lower is better)
Translates to: EGAASATQSSPAPNCLPASEDAG*CNPTKV
Trigger: GACTTTGGTTGGATTGCAGCATCCTGCATCCTCAGA...CGCTGGGAGGCAGTTGGGGGCGGGTGAACTTTGTGTAGCCGAGGCCGCACCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR-3UTR GCA 90 bp GAGGGTGCGGCCTCGGCTACACAAAGTTCACCCGCCCCCAACTGCCTCCCAGCGGGTCTCACATGTGGCTaGATCAGGATCAATGAGCTT +
Preference number: 2 (lower is better)
Translates to: EGAASATQSSPAPNCLPAGLTCG*IRINEL
Trigger: AAGCTCATTGATCCTGATGCAGCCACATGTGAGACC...CGCTGGGAGGCAGTTGGGGGCGGGTGAACTTTGTGTAGCCGAGGCCGCACCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR CCA 90 bp CTGGCCCTCAGTAGATGGGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCAGGCGGTGCAGGGCTaGAACACAGAGCGGGACTCA +
Preference number: 2 (lower is better)
Translates to: LALSRWALRQNMACWWHSQAVQG*NTERDS
Trigger: TGAGTCCCGCTCTGTGTTCCAGCCCTGCACCGCCTG...GGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACTGAGGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR TCA 90 bp CACTCAAGAGCTCTCTCCTGTTGGTCCCTGATTCGCAGGGGCACGTCATTCCTTGCATGGCTGGAAGTGTaGCTTGGAGCCCTGGCCTAC +
Preference number: 2 (lower is better)
Translates to: HSRALSCWSLIRRGTSFLAWLEV*LGALAY
Trigger: GTAGGCCAGGGCTCCAAGTCACACTTCCAGCCATGC...AAGGAATGACGTGCCCCTGCGAATCAGGGACCAACAGGAGAGAGCTCTTGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR GCA 90 bp GGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGCAGAGCAGCCACAGCTaGAGGCCCCCAGTGCTTCCT +
Preference number: 2 (lower is better)
Translates to: GLLVAFPTMSKVSGMSSQQSSHS*RPPVLP
Trigger: AGGAAGCACTGGGGGCCTGCAGCTGTGGCTGCTCTG...CTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR CCA 90 bp AGGAGATCCAGAGAAGAGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCGGGTCAACACCCTCCTaGGCAGACCTCTCACCACCC +
Preference number: 2 (lower is better)
Translates to: RRSREERARSAQCSSVSSGSTPS*ADLSPP
Trigger: GGGTGGTGAGAGGTCTGCCCAGGAGGGTGTTGACCC...GGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCTCTTCTCTGGATCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR-3UTR CCA 90 bp CCAGATGCCAGTTGGCACTGTGGGTTAGCTGGGTATTATATCTGCCCGTGTGTGGGGTCAACACCCTCCTaGGCAGACCTCTCACCACCC +
Preference number: 2 (lower is better)
Translates to: PDASWHCGLAGYYICPCVGSTPS*ADLSPP
Trigger: GGGTGGTGAGAGGTCTGCCCAGGAGGGTGTTGACCC...CACACACGGGCAGATATAATACCCAGCTAACCCACAGTGCCAACTGGCATCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR CCA 90 bp GAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCTGGGCAGAGCGTGGGAACCTCATaGAGAGTGGGTGCTTCCTCT +
Preference number: 2 (lower is better)
Translates to: EISSVLFSVLQGQHPPGQSVGTS*RVGASS
Trigger: AGAGGAAGCACCCACTCTCCATGAGGTTCCCACGCT...CTGCCCAGGAGGGTGTTGACCCTGGAGGACACTGAAGAGCACTGAGCTGATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR CCA 90 bp CACTCAAGAGCTCTCTCCTGTTGGTCCCTGATTCGCAGGGGCACGTCATTCCTTTCCCCAACCTCCCCTTaGTCCCAGGCACCATCCTCT +
Preference number: 2 (lower is better)
Translates to: HSRALSCWSLIRRGTSFLSPTSP*SQAPSS
Trigger: AGAGGATGGTGCCTGGGACCAAGGGGAGGTTGGGGA...AAGGAATGACGTGCCCCTGCGAATCAGGGACCAACAGGAGAGAGCTCTTGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR TCA 90 bp TGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCTGGGCAGACCTCTCACCACCAACCAAAGTCCAGGGTaGCTTTCGAGGAGAAGGATG +
Preference number: 2 (lower is better)
Translates to: CSSVSSRVNTLLGRPLTTNQSPG*LSRRRM
Trigger: CATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTT...GGTGGTGAGAGGTCTGCCCAGGAGGGTGTTGACCCTGGAGGACACTGAAGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR-3UTR TCA 90 bp ACTGGTCAGCCCAGGGGTGGGGCACAGGTTGAGGTCTCACATGTGGCTGCATCATGCGTGGTCTCTTTCTaGAAAGCCATCTCCACCGAA +
Preference number: 2 (lower is better)
Translates to: TGQPRGGAQVEVSHVAASCVVSF*KAISTE
Trigger: TTCGGTGGAGATGGCTTTTCAGAAAGAGACCACGCA...TGATGCAGCCACATGTGAGACCTCAACCTGTGCCCCACCCCTGGGCTGACCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR GCA 90 bp GAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCTGGGCAGCCGAATTCTCGCCCATaGTCTGCTTACAAACACGCC +
Preference number: 2 (lower is better)
Translates to: EISSVLFSVLQGQHPPGQPNSRP*SAYKHA
Trigger: GGCGTGTTTGTAAGCAGAGCATGGGCGAGAATTCGG...CTGCCCAGGAGGGTGTTGACCCTGGAGGACACTGAAGAGCACTGAGCTGATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR TCA 90 bp GAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCTGGGCAGGAGCTCACACAGTCATaGACAGAGATGCATCTGGAG +
Preference number: 2 (lower is better)
Translates to: EISSVLFSVLQGQHPPGQELTQS*TEMHLE
Trigger: CTCCAGATGCATCTCTGTTCATGACTGTGTGAGCTC...CTGCCCAGGAGGGTGTTGACCCTGGAGGACACTGAAGAGCACTGAGCTGATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR-3UTR GCA 90 bp TGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCTGGGCAGACCTCTCACCACCGGCAGGACTCAACACTaGCTCATTCACATTCATAGG +
Preference number: 2 (lower is better)
Translates to: CSSVSSRVNTLLGRPLTTGRTQH*LIHIHR
Trigger: CCTATGAATGTGAATGAGGCAGTGTTGAGTCCTGCC...GGTGGTGAGAGGTCTGCCCAGGAGGGTGTTGACCCTGGAGGACACTGAAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR-3UTR GCA 90 bp GAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCTGGGCAGGAGGATGCAGGATGCTaGAATCCAACCAAAGTCCAG +
Preference number: 2 (lower is better)
Translates to: EISSVLFSVLQGQHPPGQEDAGC*NPTKVQ
Trigger: CTGGACTTTGGTTGGATTGCAGCATCCTGCATCCTC...CTGCCCAGGAGGGTGTTGACCCTGGAGGACACTGAAGAGCACTGAGCTGATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR-3UTR CCA 90 bp GGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCAGCCCACAACCAGAATaGCCAGGGGCACACCCTGGC +
Preference number: 2 (lower is better)
Translates to: GTETKHGLLVAFPTMSKVSPQPE*PGAHPG
Trigger: GCCAGGGTGTGCCCCTGGCCATTCTGGTTGTGGGCT...GACTTTTGACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR-3UTR CCA 90 bp CTGGCCCTCAGTAGATGGGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCGAACCTCATGGAGAGTaGGTGCTTCCTCTGTCTTCC +
Preference number: 2 (lower is better)
Translates to: LALSRWALRQNMACWWHSEPHGE*VLPLSS
Trigger: GGAAGACAGAGGAAGCACCCACTCTCCATGAGGTTC...GGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACTGAGGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR TCA 90 bp AGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCGGGACCCACCCAAGATaGCACCTTCTAACTTTTGCT +
Preference number: 2 (lower is better)
Translates to: RERDQLSALQCPPGSTPSGTHPR*HLLTFA
Trigger: AGCAAAAGTTAGAAGGTGTCATCTTGGGTGGGTCCC...GGAGGGTGTTGACCCTGGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR TCA 90 bp GCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTAGCAGCTGCTGGAACTaGTGCAGGCGGTGCAGGGCT +
Preference number: 2 (lower is better)
Translates to: AFPTMSKVSGMSSQLGVLSSCWN*CRRCRA
Trigger: AGCCCTGCACCGCCTGCATCAGTTCCAGCAGCTGCT...AAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR CCA 90 bp ACTGGTCAGCCCAGGGGTGGGGCACAGGTTGAGGTCTCACATGTGGCTGCATCATGCCAGTTGGCACTGTaGGTTAGCTGGGTATTATAT +
Preference number: 2 (lower is better)
Translates to: TGQPRGGAQVEVSHVAASCQLAL*VSWVLY
Trigger: ATATAATACCCAGCTAACCCACAGTGCCAACTGGCA...TGATGCAGCCACATGTGAGACCTCAACCTGTGCCCCACCCCTGGGCTGACCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR TCA 90 bp CACTCAAGAGCTCTCTCCTGTTGGTCCCTGATTCGCAGGGGCACGTCATTCCTTAACCAAAGTCCAGGGTaGCTTTCGAGGAGAAGGATG +
Preference number: 2 (lower is better)
Translates to: HSRALSCWSLIRRGTSFLNQSPG*LSRRRM
Trigger: CATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTT...AAGGAATGACGTGCCCCTGCGAATCAGGGACCAACAGGAGAGAGCTCTTGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR-3UTR TCA 90 bp CAGTCTCCAGATGCCAGTTGGCACTGTGGGTTAGCTGGGTATTATATCTGCCCGCCAGCCAATGGGAAGTaGGTGGAAAAGTCCTGTGCA +
Preference number: 2 (lower is better)
Translates to: QSPDASWHCGLAGYYICPPANGK*VEKSCA
Trigger: TGCACAGGACTTTTCCACTCACTTCCCATTGGCTGG...CGGGCAGATATAATACCCAGCTAACCCACAGTGCCAACTGGCATCTGGAGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR TCA 90 bp CTTGGTAACTCATTCTCTTTAACAGCCCGACACAGGGTCTCCAGGAAAAGGACACCCTGGCCTACCAGGTaGATCAGCTGCAGAAGGGAC +
Preference number: 2 (lower is better)
Translates to: LGNSFSLTARHRVSRKRTPWPTR*ISCRRD
Trigger: GTCCCTTCTGCAGCTGATTCACCTGGTAGGCCAGGG...TGTCCTTTTCCTGGAGACCCTGTGTCGGGCTGTTAAAGAGAATGAGTTACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR GCA 90 bp CTGGCCCTCAGTAGATGGGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCTCTGAGGATGCAGGATaGTGCAATCCAACCAAAGTC +
Preference number: 2 (lower is better)
Translates to: LALSRWALRQNMACWWHSSEDAG*CNPTKV
Trigger: GACTTTGGTTGGATTGCAGCATCCTGCATCCTCAGA...GGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACTGAGGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR-3UTR CCA 90 bp GGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGCACTCTTCCTTCTTCTaGCTGGAGGGCATGTGGACA +
Preference number: 2 (lower is better)
Translates to: GLLVAFPTMSKVSGMSSQHSSFF*LEGMWT
Trigger: TGTCCACATGCCCTCCAGCCAGAAGAAGGAAGAGTG...CTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR-3UTR CCA 90 bp ACTGGTCAGCCCAGGGGTGGGGCACAGGTTGAGGTCTCACATGTGGCTGCATCACAGTTGGGAGTCCTTTaGAAGTCCAATTCCAAATGT +
Preference number: 2 (lower is better)
Translates to: TGQPRGGAQVEVSHVAASQLGVL*KSNSKC
Trigger: ACATTTGGAATTGGACTTCCAAAGGACTCCCAACTG...TGATGCAGCCACATGTGAGACCTCAACCTGTGCCCCACCCCTGGGCTGACCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR TCA 90 bp GCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTTCTCCTGTTGGTCCCTaGTTCGCAGGGGCACGTCAT +
Preference number: 2 (lower is better)
Translates to: AFPTMSKVSGMSSQLGVLSPVGP*FAGARH
Trigger: ATGACGTGCCCCTGCGAATCAGGGACCAACAGGAGA...AAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR-3UTR TCA 90 bp CACTCAAGAGCTCTCTCCTGTTGGTCCCTGATTCGCAGGGGCACGTCATTCCTTCTTTTGCTTTATCGCTaGAGCTCTCCACACAAGGGT +
Preference number: 2 (lower is better)
Translates to: HSRALSCWSLIRRGTSFLLLLYR*SSPHKG
Trigger: ACCCTTGTGTGGAGAGCTTCAGCGATAAAGCAAAAG...AAGGAATGACGTGCCCCTGCGAATCAGGGACCAACAGGAGAGAGCTCTTGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR GCA 90 bp CACTCAAGAGCTCTCTCCTGTTGGTCCCTGATTCGCAGGGGCACGTCATTCCTTCTGTTGAATACAGAATaGCTTGGTGAGCCTCTGAGG +
Preference number: 2 (lower is better)
Translates to: HSRALSCWSLIRRGTSFLLLNTE*LGEPLR
Trigger: CCTCAGAGGCTCACCAAGGCATTCTGTATTCAACAG...AAGGAATGACGTGCCCCTGCGAATCAGGGACCAACAGGAGAGAGCTCTTGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR-3UTR GCA 90 bp CTTGGTAACTCATTCTCTTTAACAGCCCGACACAGGGTCTCCAGGAAAAGGACAGTGCAGCTTCTGAGTTaGGTCCACCATGGGCATGGG +
Preference number: 2 (lower is better)
Translates to: LGNSFSLTARHRVSRKRTVQLLS*VHHGHG
Trigger: CCCATGCCCATGGTGGACGCAACTCAGAAGCTGCAC...TGTCCTTTTCCTGGAGACCCTGTGTCGGGCTGTTAAAGAGAATGAGTTACCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR-3UTR GCA 90 bp TCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGCAGGCTGCAGGCCCCCAGTaGTTCCTTCCAAGGGGACCC +
Preference number: 2 (lower is better)
Translates to: SSGLKIKTTFPSLPCSLQAAGPQ*FLPRGP
Trigger: GGGTCCCCTTGGAAGGAAGCACTGGGGGCCTGCAGC...CTGCAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR CCA 90 bp GCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTGGGGAGAAGACGAGGTaGGCTGCCTTACCCCAATCT +
Preference number: 2 (lower is better)
Translates to: AFPTMSKVSGMSSQLGVLGEKTR*AALPQS
Trigger: AGATTGGGGTAAGGCAGCCCACCTCGTCTTCTCCCC...AAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR TCA 90 bp GCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTGGGTGGTGGTGGGAATaGGGGCATCTCTTCTTTCAG +
Preference number: 2 (lower is better)
Translates to: AFPTMSKVSGMSSQLGVLGWWWE*GHLFFQ
Trigger: CTGAAAGAAGAGATGCCCTCATTCCCACCACCACCC...AAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR-3UTR GCA 90 bp GCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTGAAGACGAGGTGGGCTaGCTTACCCCAATCTTCTGG +
Preference number: 2 (lower is better)
Translates to: AFPTMSKVSGMSSQLGVLEDEVG*LTPIFW
Trigger: CCAGAAGATTGGGGTAAGGCAGCCCACCTCGTCTTC...AAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR TCA 90 bp GCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTCCAGCCAATGGGAAGTaGGTGGAAAAGTCCTGTGCA +
Preference number: 2 (lower is better)
Translates to: AFPTMSKVSGMSSQLGVLPANGK*VEKSCA
Trigger: TGCACAGGACTTTTCCACTCACTTCCCATTGGCTGG...AAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR-3UTR GCA 90 bp TGCAATCCAACCAAAGTCCAGGGTGACTTTCGAGGAGAAGGATGTGAAAGGGCAAAATGGAGGGGATGCTaGCAAGTCCAGAAAGTCTCC +
Preference number: 2 (lower is better)
Translates to: CNPTKVQGDFRGEGCERAKWRGC*QVQKVS
Trigger: GGAGACTTTCTGGACTTGGCAGCATCCCCTCCATTT...TGCCCTTTCACATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTTGGATTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR CCA 90 bp GGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGCAATACTCCAGCCAATaGGAAGTGAGTGGAAAAGTC +
Preference number: 2 (lower is better)
Translates to: GLLVAFPTMSKVSGMSSQQYSSQ*EVSGKV
Trigger: GACTTTTCCACTCACTTCCCATTGGCTGGAGTATTG...CTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR-3UTR CCA 90 bp GAGGTCTCACATGTGGCTGCATCAGGATCAATGAGCTTCCCACAGAGAAAACCCCAAAACATGGCCTGCTaGTGGCATTCCCAACAATGT +
Preference number: 2 (lower is better)
Translates to: EVSHVAASGSMSFPQRKPQNMAC*WHSQQC
Trigger: ACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTG...GGGTTTTCTCTGTGGGAAGCTCATTGATCCTGATGCAGCCACATGTGAGACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR CCA 90 bp AGTAGATGGGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCCCGTGTGTGTTGAATaGATACCTGCGTGGTCTCTT +
Preference number: 2 (lower is better)
Translates to: SRWALRQNMACWWHSQQCPVCVE*IPAWSL
Trigger: AAGAGACCACGCAGGTATCCATTCAACACACACGGG...ACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR CAA 90 bp AGTTGGCACTGTGGGTTAGCTGGGTATTATATCTGCCCGTGTGTGTaGAATGGATACCTGCGTGGTCTCTTTCTGAAAAGCCATCTCCAC +
Preference number: 2 (lower is better)
Translates to: SWHCGLAGYYICPCV*NGYLRGLFLKSHLH
Trigger: GTGGAGATGGCTTTTCAGAAAGAGACCACGCAGGTATCCATTCAACACACACGGGCAGATATAATACCCAGCTAACCCACAGTGCCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR TCA 90 bp GGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGTTAGAGCAGGCTGACTaGTACTCTGTTGAATACAGA +
Preference number: 2 (lower is better)
Translates to: GLLVAFPTMSKVSGMSSQLEQAD*YSVEYR
Trigger: TCTGTATTCAACAGAGTATCAGTCAGCCTGCTCTAA...CTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR-3UTR TCA 90 bp CTTCTTGGTAACTCATTCTCTTTAACAGCCCGACACAGGGTCTCCAGGAAAAGGCTTGCAGTAGCCATGTaGCAATACTCCAGCCAATGG +
Preference number: 2 (lower is better)
Translates to: LLGNSFSLTARHRVSRKRLAVAM*QYSSQW
Trigger: CCATTGGCTGGAGTATTGTCACATGGCTACTGCAAG...CCTTTTCCTGGAGACCCTGTGTCGGGCTGTTAAAGAGAATGAGTTACCAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR-3UTR GCA 90 bp GCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTGAGGATGCAGGATGCTaGAATCCAACCAAAGTCCAG +
Preference number: 2 (lower is better)
Translates to: AFPTMSKVSGMSSQLGVLEDAGC*NPTKVQ
Trigger: CTGGACTTTGGTTGGATTGCAGCATCCTGCATCCTC...AAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR-3UTR GCA 90 bp GACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATTCGACAGGCAAATCATaGTGCAGCAGGAGGGATACA +
Preference number: 2 (lower is better)
Translates to: DKTWPAGGIPNNVKSLRDSTGKS*CSRRDT
Trigger: TGTATCCCTCCTGCTGCAGCATGATTTGCCTGTCGA...ATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR CCA 90 bp CAGTCTCCAGATGCCAGTTGGCACTGTGGGTTAGCTGGGTATTATATCTGCCCGTTCACATTCATAGGCTaGAGTCATCACAGATTCTGG +
Preference number: 2 (lower is better)
Translates to: QSPDASWHCGLAGYYICPFTFIG*SHHRFW
Trigger: CCAGAATCTGTGATGACTCCAGCCTATGAATGTGAA...CGGGCAGATATAATACCCAGCTAACCCACAGTGCCAACTGGCATCTGGAGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR CCA 90 bp GTCAGAACATACGTGTCTTGGAAATGGAGGGGATGCTGCCAAGTCCAGAAAGTCAACATGGCCTGCTGGTaGCATTCCCAACAATGTCAA +
Preference number: 2 (lower is better)
Translates to: VRTYVSWKWRGCCQVQKVNMACW*HSQQCQ
Trigger: TTGACATTGTTGGGAATGCCACCAGCAGGCCATGTT...GACTTTCTGGACTTGGCAGCATCCCCTCCATTTCCAAGACACGTATGTTCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR CCA 90 bp CTTGGTAACTCATTCTCTTTAACAGCCCGACACAGGGTCTCCAGGAAAAGGACACTGGCCCTCAGTAGATaGGCACTGAGACAAAACATG +
Preference number: 2 (lower is better)
Translates to: LGNSFSLTARHRVSRKRTLALSR*ALRQNM
Trigger: CATGTTTTGTCTCAGTGCCCATCTACTGAGGGCCAG...TGTCCTTTTCCTGGAGACCCTGTGTCGGGCTGTTAAAGAGAATGAGTTACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR-3UTR GCA 90 bp TCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAATGTCCTCTGTTGAATACAGAATaGCTTGGTGAGCCTCTGAGG +
Preference number: 2 (lower is better)
Translates to: SGMSSQLGVLWKSNSKCPLLNTE*LGEPLR
Trigger: CCTCAGAGGCTCACCAAGGCATTCTGTATTCAACAG...AGGACATTTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR-3UTR GCA 90 bp ATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGAAACACGCCTCCTTCTaGAAGGCCCGGAGTGGACTC +
Preference number: 2 (lower is better)
Translates to: MSSGLKIKTTFPSLPCSLKHASF*KARSGL
Trigger: GAGTCCACTCCGGGCCTTGCAGAAGGAGGCGTGTTT...CAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR GCA 90 bp GAGGTCTCACATGTGGCTGCATCAGGATCAATGAGCTTCCCACAGAGAAAACCCACACCTTCTAACTTTTaGTTTATCGCTGAAGCTCTC +
Preference number: 2 (lower is better)
Translates to: EVSHVAASGSMSFPQRKPTPSNF*FIAEAL
Trigger: GAGAGCTTCAGCGATAAAGCAAAAGTTAGAAGGTGT...GGGTTTTCTCTGTGGGAAGCTCATTGATCCTGATGCAGCCACATGTGAGACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR GCA 90 bp ATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGTTCCTCCCTAGCCCTTaGTTTAGCACAGCCAGGGCA +
Preference number: 2 (lower is better)
Translates to: MSSGLKIKTTFPSLPCSLFLPSP*FSTARA
Trigger: TGCCCTGGCTGTGCTAAAGCAAGGGCTAGGGAGGAA...CAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR CCA 90 bp TCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGCAGCACTCTTCCTTCTTCTaGCTGGAGGGCATGTGGACA +
Preference number: 2 (lower is better)
Translates to: SSGLKIKTTFPSLPCSLQHSSFF*LEGMWT
Trigger: TGTCCACATGCCCTCCAGCCAGAAGAAGGAAGAGTG...CTGCAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR-3UTR CCA 90 bp AAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAACAATACTCCAGCCAATaGGAAGTGAGTGGAAAAGTC +
Preference number: 2 (lower is better)
Translates to: KSLRDELTVGSPLEVQFQQYSSQ*EVSGKV
Trigger: GACTTTTCCACTCACTTCCCATTGGCTGGAGTATTG...TTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR-3UTR CCA 90 bp ATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGCAAAACATGGCCTGCTaGTGGCATTCCCAACAATGT +
Preference number: 2 (lower is better)
Translates to: MSSGLKIKTTFPSLPCSLQNMAC*WHSQQC
Trigger: ACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTG...CAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR-3UTR CCA 90 bp ATTCCAAATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGCCAATGGGAAGTGAGTaGAAAAGTCCTGTGCAGCTT +
Preference number: 2 (lower is better)
Translates to: IPNVLWTQNKNYISQSPLPMGSE*KSPVQL
Trigger: AAGCTGCACAGGACTTTTCCACTCACTTCCCATTGG...CAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACATTTGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR CCA 72 bp GAGCAGCTGCTGGAACTGATGCAGGCGGTGCAGGGCTaGAACACAGAGCGGGACTCAGAGCAGCCACAGCTG +
Preference number: 3 (lower is better)
Translates to: EQLLELMQAVQG*NTERDSEQPQL
Trigger: CAGCTGTGGCTGCTCTGAGTCCCGCTCTGTGTTCCAGCCCTGCACCGCCTGCATCAGTTCCAGCAGCTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR CCA 72 bp CCGCTCCCCACAGGCTGGCTCCAGACCACAAGAGCGTaGGAACCTCATGGAGAGTGGGTGCTTCCTCTGTCT +
Preference number: 3 (lower is better)
Translates to: PLPTGWLQTTRA*EPHGEWVLPLS
Trigger: AGACAGAGGAAGCACCCACTCTCCATGAGGTTCCCACGCTCTTGTGGTCTGGAGCCAGCCTGTGGGGAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR GCA 72 bp TCTCGCCCATGCTCTGCTTACAAACACGCCTCCTTCTaGAAGGCCCGGAGTGGACTCAGAGAGCCTCTCCCC +
Preference number: 3 (lower is better)
Translates to: SRPCSAYKHASF*KARSGLREPLP
Trigger: GGGGAGAGGCTCTCTGAGTCCACTCCGGGCCTTGCAGAAGGAGGCGTGTTTGTAAGCAGAGCATGGGCGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR CAA 90 bp GAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCTGGGCAGGGGGTCCCAAGAGGATaGGTGGGAGTGTGCATGGCT +
Preference number: 3 (lower is better)
Translates to: EISSVLFSVLQGQHPPGQGVPRG*VGVCMA
Trigger: AGCCATGCACACTCCCACCAATCCTCTTGGGACCCC...CTGCCCAGGAGGGTGTTGACCCTGGAGGACACTGAAGAGCACTGAGCTGATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR CCA 72 bp GGGTGTGCTTCTACCTCCACTCTTCCTTCTTCTGGCTaGAGGGCATGTGGACAAAGCGGGGCCATGGTGAGC +
Preference number: 3 (lower is better)
Translates to: GCASTSTLPSSG*RACGQSGAMVS
Trigger: GCTCACCATGGCCCCGCTTTGTCCACATGCCCTCCAGCCAGAAGAAGGAAGAGTGGAGGTAGAAGCACACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR CCA 72 bp AGGCTGGCTCCAGACCACAAGAGCGTGGGAACCTCATaGAGAGTGGGTGCTTCCTCTGTCTTCCTCCCTAGC +
Preference number: 3 (lower is better)
Translates to: RLAPDHKSVGTS*RVGASSVFLPS
Trigger: GCTAGGGAGGAAGACAGAGGAAGCACCCACTCTCCATGAGGTTCCCACGCTCTTGTGGTCTGGAGCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR TCA 72 bp CCAACCTCCCCTTGGTCCCAGGCACCATCCTCTAAATaGCAGCAGTCTCCAGATGCCAGTTGGCACTGTGGG +
Preference number: 3 (lower is better)
Translates to: PTSPWSQAPSSK*QQSPDASWHCG
Trigger: CCCACAGTGCCAACTGGCATCTGGAGACTGCTGTCATTTAGAGGATGGTGCCTGGGACCAAGGGGAGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR GCA 72 bp GCAGCTTCTGAGTTGCGTCCACCATGGGCATGGGTGTaGTTCTACCTCCACTCTTCCTTCTTCTGGCTGGAG +
Preference number: 3 (lower is better)
Translates to: AASELRPPWAWV*FYLHSSFFWLE
Trigger: CTCCAGCCAGAAGAAGGAAGAGTGGAGGTAGAAGCACACCCATGCCCATGGTGGACGCAACTCAGAAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR CCA 72 bp GGGGAGTCACTAGCCCACTCAAGAGCTCTCTCCTGTTaGTCCCTGATTCGCAGGGGCACGTCATTCCTTCTT +
Preference number: 3 (lower is better)
Translates to: GESLAHSRALSC*SLIRRGTSFLL
Trigger: AAGAAGGAATGACGTGCCCCTGCGAATCAGGGACCAACAGGAGAGAGCTCTTGAGTGGGCTAGTGACTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR GCA 72 bp GGAAGTGAGTGGAAAAGTCCTGTGCAGCTTCTGAGTTaGGTCCACCATGGGCATGGGTGTGCTTCTACCTCC +
Preference number: 3 (lower is better)
Translates to: GSEWKSPVQLLS*VHHGHGCASTS
Trigger: GGAGGTAGAAGCACACCCATGCCCATGGTGGACGCAACTCAGAAGCTGCACAGGACTTTTCCACTCACTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR CCA 72 bp TACCTCCACTCTTCCTTCTTCTGGCTGGAGGGCATGTaGACAAAGCGGGGCCATGGTGAGCCTCACAATCAA +
Preference number: 3 (lower is better)
Translates to: YLHSSFFWLEGM*TKRGHGEPHNQ
Trigger: TTGATTGTGAGGCTCACCATGGCCCCGCTTTGTCCACATGCCCTCCAGCCAGAAGAAGGAAGAGTGGAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR-3UTR CAA 90 bp CACTCAAGAGCTCTCTCCTGTTGGTCCCTGATTCGCAGGGGCACGTCATTCCTTATCTGCCCGTGTGTGTaGAATGGATACCTGCGTGGT +
Preference number: 3 (lower is better)
Translates to: HSRALSCWSLIRRGTSFLICPCV*NGYLRG
Trigger: ACCACGCAGGTATCCATTCAACACACACGGGCAGAT...AAGGAATGACGTGCCCCTGCGAATCAGGGACCAACAGGAGAGAGCTCTTGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR CCA 72 bp GGATGTGAAAGGGCAGGGCTTCCTTTGAGGGAGAAATaGAGAGAAGGGAGGAGATCCAGAGAAGAGAGAGCG +
Preference number: 3 (lower is better)
Translates to: GCERAGLPLREK*REGRRSREERA
Trigger: CGCTCTCTCTTCTCTGGATCTCCTCCCTTCTCTCCATTTCTCCCTCAAAGGAAGCCCTGCCCTTTCACATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR CCA 72 bp GAAAAGTCCTGTGCAGCTTCTGAGTTGCGTCCACCATaGGCATGGGTGTGCTTCTACCTCCACTCTTCCTTC +
Preference number: 3 (lower is better)
Translates to: EKSCAASELRPP*AWVCFYLHSSF
Trigger: GAAGGAAGAGTGGAGGTAGAAGCACACCCATGCCCATGGTGGACGCAACTCAGAAGCTGCACAGGACTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR-3UTR CAA 90 bp CAGCCAATGGGAAGTGAGTGGAAAAGTCCTGTGCAGCTTCTGAGTTGCGTCCACAGGGCAGGGCTTCCTTaGAGGGAGAAATGGAGAGAA +
Preference number: 3 (lower is better)
Translates to: QPMGSEWKSPVQLLSCVHRAGLP*REKWRE
Trigger: TTCTCTCCATTTCTCCCTCAAAGGAAGCCCTGCCCT...GTGGACGCAACTCAGAAGCTGCACAGGACTTTTCCACTCACTTCCCATTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR-3UTR CAA 90 bp CCAGATGCCAGTTGGCACTGTGGGTTAGCTGGGTATTATATCTGCCCGTGTGTGAGGGCAGGGCTTCCTTaGAGGGAGAAATGGAGAGAA +
Preference number: 3 (lower is better)
Translates to: PDASWHCGLAGYYICPCVRAGLP*REKWRE
Trigger: TTCTCTCCATTTCTCCCTCAAAGGAAGCCCTGCCCT...CACACACGGGCAGATATAATACCCAGCTAACCCACAGTGCCAACTGGCATCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR TCA 72 bp CAATGGGAAGTGAGTGGAAAAGTCCTGTGCAGCTTCTaGGTTGCGTCCACCATGGGCATGGGTGTGCTTCTA +
Preference number: 3 (lower is better)
Translates to: QWEVSGKVLCSF*VASTMGMGVLL
Trigger: TAGAAGCACACCCATGCCCATGGTGGACGCAACTCAGAAGCTGCACAGGACTTTTCCACTCACTTCCCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR TCA 72 bp AGGTTGAGGTCTCACATGTGGCTGCATCAGGATCAATaGGCTTCCCACAGAGAAAACCCTGGTCACAGGAGG +
Preference number: 3 (lower is better)
Translates to: RLRSHMWLHQDQ*ASHRENPGHRR
Trigger: CCTCCTGTGACCAGGGTTTTCTCTGTGGGAAGCTCATTGATCCTGATGCAGCCACATGTGAGACCTCAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR GCA 72 bp CGAGCAATCAGTTTAGAGTCGACAGGCAAATCATGCTaGAGCAGGAGGGATACAGGGAAGGAAGCCTTTGGG +
Preference number: 3 (lower is better)
Translates to: RAISLESTGKSC*SRRDTGKEAFG
Trigger: CCCAAAGGCTTCCTTCCCTGTATCCCTCCTGCTGCAGCATGATTTGCCTGTCGACTCTAAACTGATTGCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR GCA 72 bp CCCCGAGCAATCAGTTTAGAGTCGACAGGCAAATCATaGTGCAGCAGGAGGGATACAGGGAAGGAAGCCTTT +
Preference number: 3 (lower is better)
Translates to: PRAISLESTGKS*CSRRDTGKEAF
Trigger: AAAGGCTTCCTTCCCTGTATCCCTCCTGCTGCAGCATGATTTGCCTGTCGACTCTAAACTGATTGCTCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR GCA 72 bp CAAGGGGACCCACCCAAGATGACACCTTCTAACTTTTaGTTTATCGCTGAAGCTCTCCACACAAGGGTGCCC +
Preference number: 3 (lower is better)
Translates to: QGDPPKMTPSNF*FIAEALHTRVP
Trigger: GGGCACCCTTGTGTGGAGAGCTTCAGCGATAAAGCAAAAGTTAGAAGGTGTCATCTTGGGTGGGTCCCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR GCA 72 bp CTTTCTGAAAAGCCATCTCCACCGAATTCTCGCCCATaGTCTGCTTACAAACACGCCTCCTTCTGCAAGGCC +
Preference number: 3 (lower is better)
Translates to: LSEKPSPPNSRP*SAYKHASFCKA
Trigger: GGCCTTGCAGAAGGAGGCGTGTTTGTAAGCAGAGCATGGGCGAGAATTCGGTGGAGATGGCTTTTCAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR GCA 72 bp GCCAGTTGGCACTGTGGGTTAGCTGGGTATTATATCTaGCCGTGTGTGTTGAATGGATACCTGCGTGGTCTC +
Preference number: 3 (lower is better)
Translates to: ASWHCGLAGYYI*PCVLNGYLRGL
Trigger: GAGACCACGCAGGTATCCATTCAACACACACGGGCAGATATAATACCCAGCTAACCCACAGTGCCAACTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR CCA 72 bp TCATTCACATTCATAGGCTGGAGTCATCACAGATTCTaGCCACTTTCTCCTCCGGAGGGCAGGCAACACCAC +
Preference number: 3 (lower is better)
Translates to: SFTFIGWSHHRF*PLSPPEGRQHH
Trigger: GTGGTGTTGCCTGCCCTCCGGAGGAGAAAGTGGCCAGAATCTGTGATGACTCCAGCCTATGAATGTGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR CCA 72 bp TGCGTCATAGGATGGAGTTTTATTGGGAGGACATTCTaGACGGGCTCCCAGCAAGAGTCTGGCAATGGAGCA +
Preference number: 3 (lower is better)
Translates to: CVIGWSFIGRTF*TGSQQESGNGA
Trigger: TGCTCCATTGCCAGACTCTTGCTGGGAGCCCGTCCAGAATGTCCTCCCAATAAAACTCCATCCTATGACGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR CCA 72 bp AACTTAATAGGAGGTCCTAAAGGACCTGGGGGAATTTaGGGAGAAGACGAGGTGGGCTGCCTTACCCCAATC +
Preference number: 3 (lower is better)
Translates to: NLIGGPKGPGGI*GEDEVGCLTPI
Trigger: GATTGGGGTAAGGCAGCCCACCTCGTCTTCTCCCCAAATTCCCCCAGGTCCTTTAGGACCTCCTATTAAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR CAA 90 bp CAACATCTGTGTCTGCCCTCCACTCTTGTAAGGGCCAGTAAGGTAGTACCCAGTGAAGGGATTTCCAATTaGGAGGGGCAGTCTGGGAAG +
Preference number: 3 (lower is better)
Translates to: QHLCLPSTLVRASKVVPSEGISN*EGQSGK
Trigger: CTTCCCAGACTGCCCCTCCAAATTGGAAATCCCTTC...ACTGGGTACTACCTTACTGGCCCTTACAAGAGTGGAGGGCAGACACAGATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR CAA 90 bp CTTCTTGGTAACTCATTCTCTTTAACAGCCCGACACAGGGTCTCCAGGAAAAGGGTCTCCAGATGCCAGTaGGCACTGTGGGTTAGCTGG +
Preference number: 3 (lower is better)
Translates to: LLGNSFSLTARHRVSRKRVSRCQ*ALWVSW
Trigger: CCAGCTAACCCACAGTGCCAACTGGCATCTGGAGAC...CCTTTTCCTGGAGACCCTGTGTCGGGCTGTTAAAGAGAATGAGTTACCAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR GCA 72 bp GCCCTCAGTAGATGGGCACTGAGACAAAACATGGCCTaGTGGTGGCATTCCCAACAATGTCAAAAGTCTCAG +
Preference number: 3 (lower is better)
Translates to: ALSRWALRQNMA*WWHSQQCQKSQ
Trigger: CTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACTGAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR GCA 72 bp AATCTGGCACAAGGATGTCTGCTTAGGCAACTCCACTaGCTGGCATGCTCTCTCCCTAGGAAAACACCAAAC +
Preference number: 3 (lower is better)
Translates to: NLAQGCLLRQLH*LACSLPRKTPN
Trigger: GTTTGGTGTTTTCCTAGGGAGAGAGCATGCCAGGCAGTGGAGTTGCCTAAGCAGACATCCTTGTGCCAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR CCA 72 bp GCAGGACTCAACACTGCCTCATTCACATTCATAGGCTaGAGTCATCACAGATTCTGGCCACTTTCTCCTCCG +
Preference number: 3 (lower is better)
Translates to: AGLNTASFTFIG*SHHRFWPLSPP
Trigger: CGGAGGAGAAAGTGGCCAGAATCTGTGATGACTCCAGCCTATGAATGTGAATGAGGCAGTGTTGAGTCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR CCA 72 bp CAGAACAAAGGTGGGGGAGTCAGAACATACGTGTCTTaGAAATGGAGGGGATGCTGCCAAGTCCAGAAAGTC +
Preference number: 3 (lower is better)
Translates to: QNKGGGVRTYVS*KWRGCCQVQKV
Trigger: GACTTTCTGGACTTGGCAGCATCCCCTCCATTTCCAAGACACGTATGTTCTGACTCCCCCACCTTTGTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR CCA 72 bp CTCAGTAGATGGGCACTGAGACAAAACATGGCCTGCTaGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGA +
Preference number: 3 (lower is better)
Translates to: LSRWALRQNMAC*WHSQQCQKSQG
Trigger: TCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR CCA 72 bp GCAGTCTCCAGATGCCAGTTGGCACTGTGGGTTAGCTaGGTATTATATCTGCCCGTGTGTGTTGAATGGATA +
Preference number: 3 (lower is better)
Translates to: AVSRCQLALWVS*VLYLPVCVEWI
Trigger: TATCCATTCAACACACACGGGCAGATATAATACCCAGCTAACCCACAGTGCCAACTGGCATCTGGAGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR-3UTR CAA 90 bp ATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGAGGACCTGGGGGAATTaGGGGAGAAGACGAGGTGGG +
Preference number: 3 (lower is better)
Translates to: MSSGLKIKTTFPSLPCSLRTWGN*GRRRGG
Trigger: CCCACCTCGTCTTCTCCCCAAATTCCCCCAGGTCCT...CAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR CCA 72 bp GACAGGAGCTCACACAGTCATGAACAGAGATGCATCTaGAGCAGGAATAAGGATGCTGACAACATCTGTGTC +
Preference number: 3 (lower is better)
Translates to: DRSSHSHEQRCI*SRNKDADNICV
Trigger: GACACAGATGTTGTCAGCATCCTTATTCCTGCTCCAGATGCATCTCTGTTCATGACTGTGTGAGCTCCTGTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR CCA 72 bp AAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTTaGAAGTCCAATTCCAAATGTCCTCTGGACTCAAAA +
Preference number: 3 (lower is better)
Translates to: KVSGMSSQLGVL*KSNSKCPLDSK
Trigger: TTTTGAGTCCAGAGGACATTTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR CCA 72 bp TTATATCTGCCCGTGTGTGTTGAATGGATACCTGCGTaGTCTCTTTCTGAAAAGCCATCTCCACCGAATTCT +
Preference number: 3 (lower is better)
Translates to: LYLPVCVEWIPA*SLSEKPSPPNS
Trigger: AGAATTCGGTGGAGATGGCTTTTCAGAAAGAGACCACGCAGGTATCCATTCAACACACACGGGCAGATATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR CCA 72 bp GTTAGCTGGGTATTATATCTGCCCGTGTGTGTTGAATaGATACCTGCGTGGTCTCTTTCTGAAAAGCCATCT +
Preference number: 3 (lower is better)
Translates to: VSWVLYLPVCVE*IPAWSLSEKPS
Trigger: AGATGGCTTTTCAGAAAGAGACCACGCAGGTATCCATTCAACACACACGGGCAGATATAATACCCAGCTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR CCA 72 bp TGGGAGTCCTTTGGAAGTCCAATTCCAAATGTCCTCTaGACTCAAAATAAAAACTACATTTCCCAGTCTCCC +
Preference number: 3 (lower is better)
Translates to: WESFGSPIPNVL*TQNKNYISQSP
Trigger: GGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACATTTGGAATTGGACTTCCAAAGGACTCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp GAGGGTGCGGCCTCGGCTACACAAAGTTCACCCGCCCCCAACTGCCTCCCAGCGCCACCGGGGAGGCAATaGTGGGCACCCTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: EGAASATQSSPAPNCLPAPPGRQ*WAPWAP
Trigger: AGGAGCCCAGGGTGCCCACCATTGCCTCCCCGGTGG...CGCTGGGAGGCAGTTGGGGGCGGGTGAACTTTGTGTAGCCGAGGCCGCACCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp GAGGGTGCGGCCTCGGCTACACAAAGTTCACCCGCCCCCAACTGCCTCCCAGCGTGCCTAAGAGGGTGGTaGGCACTGCGCTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: EGAASATQSSPAPNCLPACLRGW*ALRWLG
Trigger: GCCCAGCCAGCGCAGTGCGCACCACCCTCTTAGGCA...CGCTGGGAGGCAGTTGGGGGCGGGTGAACTTTGTGTAGCCGAGGCCGCACCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR TCA 90 bp GAGGGTGCGGCCTCGGCTACACAAAGTTCACCCGCCCCCAACTGCCTCCCAGCGCAGTGGCCTGGCCATTaGAGGTGGCTGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: EGAASATQSSPAPNCLPAQWPGH*RWLRWR
Trigger: CCTCCACCTCAGCCACCTTCAATGGCCAGGCCACTG...CGCTGGGAGGCAGTTGGGGGCGGGTGAACTTTGTGTAGCCGAGGCCGCACCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR TCA 90 bp GAGGGTGCGGCCTCGGCTACACAAAGTTCACCCGCCCCCAACTGCCTCCCAGCGGGTCCAGCCTGGTGGTaGATGTTGGTTGTCGAGGGG +
Preference number: 4 (lower is better)
Translates to: EGAASATQSSPAPNCLPAGPAWW*MLVVEG
Trigger: CCCCTCGACAACCAACATTCACCACCAGGCTGGACC...CGCTGGGAGGCAGTTGGGGGCGGGTGAACTTTGTGTAGCCGAGGCCGCACCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp GAGGGTGCGGCCTCGGCTACACAAAGTTCACCCGCCCCCAACTGCCTCCCAGCGGTTGGGGACAGAGGCTaGTGTCGAGGAGGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: EGAASATQSSPAPNCLPAVGDRG*CRGGQE
Trigger: CTCTTGGCCTCCTCGACAGCAGCCTCTGTCCCCAAC...CGCTGGGAGGCAGTTGGGGGCGGGTGAACTTTGTGTAGCCGAGGCCGCACCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp GAGGGTGCGGCCTCGGCTACACAAAGTTCACCCGCCCCCAACTGCCTCCCAGCGAGTTGGGGGCTTTGGTaGCCTTCATGCGTGGGGAAC +
Preference number: 4 (lower is better)
Translates to: EGAASATQSSPAPNCLPASWGLW*PSCVGN
Trigger: GTTCCCCACGCATGAAGGTCACCAAAGCCCCCAACT...CGCTGGGAGGCAGTTGGGGGCGGGTGAACTTTGTGTAGCCGAGGCCGCACCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR TCA 90 bp GAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCTGGGCAGCCAGGAGGCGGCAGCTaGGGTTCAGGGCAGCGCCCT +
Preference number: 4 (lower is better)
Translates to: EISSVLFSVLQGQHPPGQPGGGS*GSGQRP
Trigger: AGGGCGCTGCCCTGAACCTCAGCTGCCGCCTCCTGG...CTGCCCAGGAGGGTGTTGACCCTGGAGGACACTGAAGAGCACTGAGCTGATCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp TCAGAGCAGCCACAGCTGCAGGCCCCCAGTGCTTCCTTCCAAGGGGACCCACCCGCATGGCTGGAAGTGTaGCTTGGAGCCCTGGCCTAC +
Preference number: 4 (lower is better)
Translates to: SEQPQLQAPSASFQGDPPAWLEV*LGALAY
Trigger: GTAGGCCAGGGCTCCAAGTCACACTTCCAGCCATGC...GGGTGGGTCCCCTTGGAAGGAAGCACTGGGGGCCTGCAGCTGTGGCTGCTCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR GCA 90 bp GGTCAGCCCAGGGGTGGGGCACAGGTTGAGGTCTCACATGTGGCTGCATCAGGAAGCTGTGGACCCCGCTaGTCGTGGCCAGCACCTTGC +
Preference number: 4 (lower is better)
Translates to: GQPRGGAQVEVSHVAASGSCGPR*SWPAPC
Trigger: GCAAGGTGCTGGCCACGAGCAGCGGGGTCCACAGCT...TCCTGATGCAGCCACATGTGAGACCTCAACCTGTGCCCCACCCCTGGGCTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR GCA 90 bp TCAGAGCAGCCACAGCTGCAGGCCCCCAGTGCTTCCTTCCAAGGGGACCCACCCAGGCCACCAGTCGACTaGCAAGGTGGAGAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: SEQPQLQAPSASFQGDPPRPPVD*QGGESG
Trigger: GCCTGACTCTCCACCTTGGCAGTCGACTGGTGGCCT...GGGTGGGTCCCCTTGGAAGGAAGCACTGGGGGCCTGCAGCTGTGGCTGCTCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CCA 90 bp GAGGGTGCGGCCTCGGCTACACAAAGTTCACCCGCCCCCAACTGCCTCCCAGCGGGAGTGAGAGGCGGGTaGTTGACTACCACGCTGACA +
Preference number: 4 (lower is better)
Translates to: EGAASATQSSPAPNCLPAGVRGG*LTTTLT
Trigger: TGTCAGCGTGGTAGTCAACCACCCGCCTCTCACTCC...CGCTGGGAGGCAGTTGGGGGCGGGTGAACTTTGTGTAGCCGAGGCCGCACCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp GAGGGTGCGGCCTCGGCTACACAAAGTTCACCCGCCCCCAACTGCCTCCCAGCGCCACGAAGACCATCATaGTGGGCGTCTTGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: EGAASATQSSPAPNCLPAPRRPS*WASWEG
Trigger: ACCCTCCCAAGACGCCCACCATGATGGTCTTCGTGG...CGCTGGGAGGCAGTTGGGGGCGGGTGAACTTTGTGTAGCCGAGGCCGCACCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp GAGGGTGCGGCCTCGGCTACACAAAGTTCACCCGCCCCCAACTGCCTCCCAGCGACCGCCCGATGGTGCTaGTTGAGCCCAGCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: EGAASATQSSPAPNCLPATARWC*LSPASF
Trigger: AAAACTTGCTGGGCTCAATCAGCACCATCGGGCGGT...CGCTGGGAGGCAGTTGGGGGCGGGTGAACTTTGTGTAGCCGAGGCCGCACCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp TGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCTGGGCAGACCTCTCACCACCGCCAAGAGCTCCTGGTaGAGCTGGCTCCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: CSSVSSRVNTLLGRPLTTAKSSW*SWLPRA
Trigger: AGCCCTGGGGAGCCAGCTGCACCAGGAGCTCTTGGC...GGTGGTGAGAGGTCTGCCCAGGAGGGTGTTGACCCTGGAGGACACTGAAGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp GAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCTGGGCAGCGGGGAGCAGGAGGCTaGTGCCGGGACCCTCGTGAA +
Preference number: 4 (lower is better)
Translates to: EISSVLFSVLQGQHPPGQRGAGG*CRDPRE
Trigger: TTCACGAGGGTCCCGGCAGCAGCCTCCTGCTCCCCG...CTGCCCAGGAGGGTGTTGACCCTGGAGGACACTGAAGAGCACTGAGCTGATCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp GAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCTGGGCAGTGGAGGGTCTCCAGGTaGCCGACGCCGGTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: EISSVLFSVLQGQHPPGQWRVSR*PTPVGS
Trigger: TGAGCCCACCGGCGTCGGCCACCTGGAGACCCTCCA...CTGCCCAGGAGGGTGTTGACCCTGGAGGACACTGAAGAGCACTGAGCTGATCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp TGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCTGGGCAGACCTCTCACCACCGGTGGAGAGTCAGGCTaGCGAGCGGCTCGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: CSSVSSRVNTLLGRPLTTGGESG*RAARCP
Trigger: TGGACAGCGAGCCGCTCGCCAGCCTGACTCTCCACC...GGTGGTGAGAGGTCTGCCCAGGAGGGTGTTGACCCTGGAGGACACTGAAGAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp CTGGCCCTCAGTAGATGGGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCGGCCCGGCAGTGGTATaGGCCGGCGTCAGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: LALSRWALRQNMACWWHSGPAVV*AGVSAG
Trigger: TCCAGCACTGACGCCGGCTCATACCACTGCCGGGCC...GGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACTGAGGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR TCA 90 bp GAGGGTGCGGCCTCGGCTACACAAAGTTCACCCGCCCCCAACTGCCTCCCAGCGCCAGCCAATGGGAAGTaGGTGGAAAAGTCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: EGAASATQSSPAPNCLPAPANGK*VEKSCA
Trigger: TGCACAGGACTTTTCCACTCACTTCCCATTGGCTGG...CGCTGGGAGGCAGTTGGGGGCGGGTGAACTTTGTGTAGCCGAGGCCGCACCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp ACTGGTCAGCCCAGGGGTGGGGCACAGGTTGAGGTCTCACATGTGGCTGCATCATCACTTCTGCCCAGGTaGCGGGCAGGCTTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: TGQPRGGAQVEVSHVAASSLLPR*RAGLGV
Trigger: CACTCCCAAGCCTGCCCGTCACCTGGGCAGAAGTGA...TGATGCAGCCACATGTGAGACCTCAACCTGTGCCCCACCCCTGGGCTGACCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR GCA 90 bp TGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCTGGGCAGACCTCTCACCACCATCCGGCCGTGGTCCTaGCAGGACATGGCCATGTGG +
Preference number: 4 (lower is better)
Translates to: CSSVSSRVNTLLGRPLTTIRPWS*QDMAMW
Trigger: CCACATGGCCATGTCCTGGCAGGACCACGGCCGGAT...GGTGGTGAGAGGTCTGCCCAGGAGGGTGTTGACCCTGGAGGACACTGAAGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp AGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCGGCACAGGCTCCGCGTaGAGCCGCCGGTCATTCCAG +
Preference number: 4 (lower is better)
Translates to: RERDQLSALQCPPGSTPSGTGSA*SRRSFQ
Trigger: CTGGAATGACCGGCGGCTGCACGCGGAGCCTGTGCC...GGAGGGTGTTGACCCTGGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp TGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCTGGGCAGACCTCTCACCACCTGCAGCCGGAGGGTATaGGAGTGGGCATCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: CSSVSSRVNTLLGRPLTTCSRRV*EWASSS
Trigger: GCTGGAGGATGCCCACTCCCATACCCTCCGGCTGCA...GGTGGTGAGAGGTCTGCCCAGGAGGGTGTTGACCCTGGAGGACACTGAAGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp GAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCTGGGCAGGCCTGGAACCGACCATaGGATGGGACCTGGGGACCC +
Preference number: 4 (lower is better)
Translates to: EISSVLFSVLQGQHPPGQAWNRP*DGTWGP
Trigger: GGGTCCCCAGGTCCCATCCCATGGTCGGTTCCAGGC...CTGCCCAGGAGGGTGTTGACCCTGGAGGACACTGAAGAGCACTGAGCTGATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp CTGGCCCTCAGTAGATGGGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCGCCGAGGTCGACTCCTaGAGGGGCTGGCCATCCCGA +
Preference number: 4 (lower is better)
Translates to: LALSRWALRQNMACWWHSAEVDS*RGWPSR
Trigger: TCGGGATGGCCAGCCCCTCCAGGAGTCGACCTCGGC...GGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACTGAGGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp GATCCAGAGAAGAGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGGCTGAGGCCGAGGCCTaGCCCAGGGTGTTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: DPEKRERDQLSALQCPPGAEAEA*PRVLEA
Trigger: GGCCTCCAACACCCTGGGCCAGGCCTCGGCCTCAGC...CCCTGGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCTCTTCTCTGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp TGCATGGCTGGAAGTGTGACTTGGAGCCCTGGCCTACCAGGTGAATCAGCTGCACTCATCCCTGGGCTGTaGCCCTCGCAGCTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: CMAGSVTWSPGLPGESAALIPGL*PSQLQA
Trigger: CGCCTGGAGCTGCGAGGGCCACAGCCCAGGGATGAG...TGCAGCTGATTCACCTGGTAGGCCAGGGCTCCAAGTCACACTTCCAGCCATGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CCA 90 bp AGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCAGGGACGTGTTGGCCTaGCCCAGAGGGCTGCGGGCA +
Preference number: 4 (lower is better)
Translates to: RERDQLSALQCPPGSTPSRDVLA*PRGLRA
Trigger: TGCCCGCAGCCCTCTGGGCCAGGCCAACACGTCCCT...GGAGGGTGTTGACCCTGGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp TGCATGGCTGGAAGTGTGACTTGGAGCCCTGGCCTACCAGGTGAATCAGCTGCAGCTCCAGGGACGTGTTaGCCTGGCCCAGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: CMAGSVTWSPGLPGESAAAPGTC*PGPEGC
Trigger: GCAGCCCTCTGGGCCAGGCCAACACGTCCCTGGAGC...TGCAGCTGATTCACCTGGTAGGCCAGGGCTCCAAGTCACACTTCCAGCCATGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CCA 90 bp AGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCGAGCTGCGGGTGCCCTaGGCATCCTGGGCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: RERDQLSALQCPPGSTPSELRVP*ASWAWQ
Trigger: TTGCCAGGCCCAGGATGCCCAGGGCACCCGCAGCTC...GGAGGGTGTTGACCCTGGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp TGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCTGGGCAGACCTCTCACCACCGGACCCCGCTGCTCGTaGCCAGCACCTTGCCATCAT +
Preference number: 4 (lower is better)
Translates to: CSSVSSRVNTLLGRPLTTGPRCS*PAPCHH
Trigger: ATGATGGCAAGGTGCTGGCCACGAGCAGCGGGGTCC...GGTGGTGAGAGGTCTGCCCAGGAGGGTGTTGACCCTGGAGGACACTGAAGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp CTGGCCCTCAGTAGATGGGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCTGCCGGGACCCTCGTaGAGCAGGGCTCCATTCAGG +
Preference number: 4 (lower is better)
Translates to: LALSRWALRQNMACWWHSLPGPS*SRAPFR
Trigger: CCTGAATGGAGCCCTGCTTCACGAGGGTCCCGGCAG...GGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACTGAGGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR TCA 90 bp TATTGGGAGGACATTCTGGACGGGCTCCCAGCAAGAGTCTGGCAATGGAGCATGGCTGCAGCCACCCCCTaGTGGCAGGGAAGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: YWEDILDGLPARVWQWSMAAATP*WQGSGH
Trigger: GTGGCCACTTCCCTGCCATCAGGGGGTGGCTGCAGC...CATGCTCCATTGCCAGACTCTTGCTGGGAGCCCGTCCAGAATGTCCTCCCAATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp GCGTCCACCATGGGCATGGGTGTGCTTCTACCTCCACTCTTCCTTCTTCTGGCTGCAAGAGTAGGCGCCTaGATGAGCCCGCGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: ASTMGMGVLLPPLFLLLAARVGA*MSPRGH
Trigger: GTGGCCACGCGGGCTCATGCAGGCGCCTACTCTTGC...AGCCAGAAGAAGGAAGAGTGGAGGTAGAAGCACACCCATGCCCATGGTGGACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp TGCATGGCTGGAAGTGTGACTTGGAGCCCTGGCCTACCAGGTGAATCAGCTGCAGTCCAGGCCAGGCTCTaGCACCACGCGTGCACCTTC +
Preference number: 4 (lower is better)
Translates to: CMAGSVTWSPGLPGESAAVQARL*HHACTF
Trigger: GAAGGTGCACGCGTGGTGGCAGAGCCTGGCCTGGAC...TGCAGCTGATTCACCTGGTAGGCCAGGGCTCCAAGTCACACTTCCAGCCATGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR GCA 90 bp GCGTCCACCATGGGCATGGGTGTGCTTCTACCTCCACTCTTCCTTCTTCTGGCTCTCGGCAATCCAGGATaGCCCGGAGGCCACCCTCAG +
Preference number: 4 (lower is better)
Translates to: ASTMGMGVLLPPLFLLLALGNPG*PGGHPQ
Trigger: CTGAGGGTGGCCTCCGGGGCATCCTGGATTGCCGAG...AGCCAGAAGAAGGAAGAGTGGAGGTAGAAGCACACCCATGCCCATGGTGGACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp GAGGGTGCGGCCTCGGCTACACAAAGTTCACCCGCCCCCAACTGCCTCCCAGCGTGGAAATGGAGGGGATaGTGCCAAGTCCAGAAAGTC +
Preference number: 4 (lower is better)
Translates to: EGAASATQSSPAPNCLPAWKWRG*CQVQKV
Trigger: GACTTTCTGGACTTGGCAGCATCCCCTCCATTTCCA...CGCTGGGAGGCAGTTGGGGGCGGGTGAACTTTGTGTAGCCGAGGCCGCACCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CCA 90 bp AGGAGATCCAGAGAAGAGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCGCGCACTGCGCTGGCTaGGCTCACAGGGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: RRSREERARSAQCSSVSSAHCAG*AHRGLQ
Trigger: CTGGAGGCCCCTGTGAGCCCAGCCAGCGCAGTGCGC...GGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCTCTTCTCTGGATCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp GATCCAGAGAAGAGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTGGTGCGCACTGCGCTaGCTGGGCTCACAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: DPEKRERDQLSALQCPPGWCALR*LGSQGP
Trigger: AGGCCCCTGTGAGCCCAGCCAGCGCAGTGCGCACCA...CCCTGGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCTCTTCTCTGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp TGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCTGGGCAGACCTCTCACCACCACGCCCCATGAGGCCTaGCCTGCTGGGAAGAATGAG +
Preference number: 4 (lower is better)
Translates to: CSSVSSRVNTLLGRPLTTTPHEA*PAGKNE
Trigger: CTCATTCTTCCCAGCAGGCCAGGCCTCATGGGGCGT...GGTGGTGAGAGGTCTGCCCAGGAGGGTGTTGACCCTGGAGGACACTGAAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp TATTGGGAGGACATTCTGGACGGGCTCCCAGCAAGAGTCTGGCAATGGAGCATGCGCAGGATCCGGCCGTaGTCCTGCCAGGACATGGCC +
Preference number: 4 (lower is better)
Translates to: YWEDILDGLPARVWQWSMRRIRP*SCQDMA
Trigger: GGCCATGTCCTGGCAGGACCACGGCCGGATCCTGCG...CATGCTCCATTGCCAGACTCTTGCTGGGAGCCCGTCCAGAATGTCCTCCCAATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp GAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCTGGGCAGCCCACAAGTCCCGCCTaGGTCTCCAGGAAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: EISSVLFSVLQGQHPPGQPTSPA*VSRKAV
Trigger: GACAGCCTTCCTGGAGACCCAGGCGGGACTTGTGGG...CTGCCCAGGAGGGTGTTGACCCTGGAGGACACTGAAGAGCACTGAGCTGATCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp TATTGGGAGGACATTCTGGACGGGCTCCCAGCAAGAGTCTGGCAATGGAGCATGTCCCGGGCCCGGCAGTaGTATGAGCCGGCGTCAGTG +
Preference number: 4 (lower is better)
Translates to: YWEDILDGLPARVWQWSMSRARQ*YEPASV
Trigger: CACTGACGCCGGCTCATACCACTGCCGGGCCCGGGA...CATGCTCCATTGCCAGACTCTTGCTGGGAGCCCGTCCAGAATGTCCTCCCAATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp CTGGCCCTCAGTAGATGGGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCACCCTGGGGCTGACTaGAGGCCACCAGTCGACTGC +
Preference number: 4 (lower is better)
Translates to: LALSRWALRQNMACWWHSHPGAD*RPPVDC
Trigger: GCAGTCGACTGGTGGCCTCCAGTCAGCCCCAGGGTG...GGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACTGAGGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp ACTGGTCAGCCCAGGGGTGGGGCACAGGTTGAGGTCTCACATGTGGCTGCATCACCACCCTCAGGGCATTaGGGGAAGCCAGGACATGGA +
Preference number: 4 (lower is better)
Translates to: TGQPRGGAQVEVSHVAASPPSGH*GKPGHG
Trigger: TCCATGTCCTGGCTTCCCCCAATGCCCTGAGGGTGG...TGATGCAGCCACATGTGAGACCTCAACCTGTGCCCCACCCCTGGGCTGACCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CCA 90 bp CACTCAAGAGCTCTCTCCTGTTGGTCCCTGATTCGCAGGGGCACGTCATTCCTTGGCAGGCAACACCACTaGTCAGCCCAGGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: HSRALSCWSLIRRGTSFLGRQHH*SAQGWG
Trigger: GCCCCACCCCTGGGCTGACCAGTGGTGTTGCCTGCC...AAGGAATGACGTGCCCCTGCGAATCAGGGACCAACAGGAGAGAGCTCTTGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp AGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCGCCAGGGGCACACCCTaGCCCTCAGTAGATGGGCAC +
Preference number: 4 (lower is better)
Translates to: RERDQLSALQCPPGSTPSARGTP*PSVDGH
Trigger: GTGCCCATCTACTGAGGGCCAGGGTGTGCCCCTGGC...GGAGGGTGTTGACCCTGGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp TCAGAGCAGCCACAGCTGCAGGCCCCCAGTGCTTCCTTCCAAGGGGACCCACCCGAACCTCATGGAGAGTaGGTGCTTCCTCTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: SEQPQLQAPSASFQGDPPEPHGE*VLPLSS
Trigger: GGAAGACAGAGGAAGCACCCACTCTCCATGAGGTTC...GGGTGGGTCCCCTTGGAAGGAAGCACTGGGGGCCTGCAGCTGTGGCTGCTCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR TCA 90 bp GGTCAGCCCAGGGGTGGGGCACAGGTTGAGGTCTCACATGTGGCTGCATCAGGAAGCACCTTGCCATCATaGGATAGGGCCAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GQPRGGAQVEVSHVAASGSTLPS*DRASSA
Trigger: TGCTGAGCTGGCCCTATCTCATGATGGCAAGGTGCT...TCCTGATGCAGCCACATGTGAGACCTCAACCTGTGCCCCACCCCTGGGCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR TCA 90 bp CAGCCAATGGGAAGTGAGTGGAAAAGTCCTGTGCAGCTTCTGAGTTGCGTCCACGGAGCACCCTGGGGCTaGCTGGAGGCCACCAGTCGA +
Preference number: 4 (lower is better)
Translates to: QPMGSEWKSPVQLLSCVHGAPWG*LEATSR
Trigger: TCGACTGGTGGCCTCCAGTCAGCCCCAGGGTGCTCC...GTGGACGCAACTCAGAAGCTGCACAGGACTTTTCCACTCACTTCCCATTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp CTGGCCCTCAGTAGATGGGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCCAGAGTCCTCGGGCTaGAGGTCCTTCAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LALSRWALRQNMACWWHSPESSG*RSFSSR
Trigger: CCTGCTGCTGAAGGACCTGCAGCCCGAGGACTCTGG...GGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACTGAGGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp ATTCATAGGCTGGAGTCATCACAGATTCTGGCCACTTTCTCCTCCGGAGGGCAGATGAGCCGGCGTCAGTaGTGGAGGCCGCGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: IHRLESSQILATFSSGGQMSRRQ*WRPRGA
Trigger: TGCTCCCCGCGGCCTCCAGCACTGACGCCGGCTCAT...CTGCCCTCCGGAGGAGAAAGTGGCCAGAATCTGTGATGACTCCAGCCTATGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp GAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCTGGGCAGGTTGGGGACAGAGGCTaGTGTCGAGGAGGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: EISSVLFSVLQGQHPPGQVGDRG*CRGGQE
Trigger: CTCTTGGCCTCCTCGACAGCAGCCTCTGTCCCCAAC...CTGCCCAGGAGGGTGTTGACCCTGGAGGACACTGAAGAGCACTGAGCTGATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp CTGGCCCTCAGTAGATGGGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCACTGTCCCCGGAGGTaGAGGCCAGGATATGACCCC +
Preference number: 4 (lower is better)
Translates to: LALSRWALRQNMACWWHSHCPRR*RPGYDP
Trigger: GGGGTCATATCCTGGCCTCCACCTCCGGGGACAGTG...GGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACTGAGGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp CAACATCTGTGTCTGCCCTCCACTCTTGTAAGGGCCAGTAAGGTAGTACCCAGTGCGAAGAGGGGCCACTaGCACTGTGGCCGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: QHLCLPSTLVRASKVVPSAKRGH*HCGRPG
Trigger: CCCGGGACGGCCACAGTGCCAGTGGCCCCTCTTCGC...ACTGGGTACTACCTTACTGGCCCTTACAAGAGTGGAGGGCAGACACAGATGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp TGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCTGGGCAGACCTCTCACCACCTGCCCAGGGCATTGCTaGCCTCACAGAGGTACAAGC +
Preference number: 4 (lower is better)
Translates to: CSSVSSRVNTLLGRPLTTCPGHC*PHRGTS
Trigger: GCTTGTACCTCTGTGAGGCCAGCAATGCCCTGGGCA...GGTGGTGAGAGGTCTGCCCAGGAGGGTGTTGACCCTGGAGGACACTGAAGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp CAGCCAATGGGAAGTGAGTGGAAAAGTCCTGTGCAGCTTCTGAGTTGCGTCCACCAGCTAGGCTCGTGGTaGCTGAGCCTGGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: QPMGSEWKSPVQLLSCVHQLGSW*LSLGPG
Trigger: CCCAGGCCCCAGGCTCAGCCACCACGAGCCTAGCTG...GTGGACGCAACTCAGAAGCTGCACAGGACTTTTCCACTCACTTCCCATTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp AGGAGATCCAGAGAAGAGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCTGGAGCAGCCGCAGCTaGGCCGGAGGGTCACTGTCC +
Preference number: 4 (lower is better)
Translates to: RRSREERARSAQCSSVSSWSSRS*AGGSLS
Trigger: GGACAGTGACCCTCCGGCCCAGCTGCGGCTGCTCCA...GGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCTCTTCTCTGGATCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp AGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCCAGCCACATGCAGCCTaGGAGAGCTGCCTTCGGGTC +
Preference number: 4 (lower is better)
Translates to: RERDQLSALQCPPGSTPSQPHAA*ESCLRV
Trigger: GACCCGAAGGCAGCTCTCCCAGGCTGCATGTGGCTG...GGAGGGTGTTGACCCTGGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp AGGAGATCCAGAGAAGAGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCGCTCCAGGGACGTGTTaGCCTGGCCCAGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RRSREERARSAQCSSVSSAPGTC*PGPEGC
Trigger: GCAGCCCTCTGGGCCAGGCCAACACGTCCCTGGAGC...GGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCTCTTCTCTGGATCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp CACACAAGGGTGCCCCGAGCAATCAGTTTAGAGTCGACAGGCAAATCATGCTGCGAGCTGCGGGTGCCCTaGGCATCCTGGGCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: HTRVPRAISLESTGKSCCELRVP*ASWAWQ
Trigger: TTGCCAGGCCCAGGATGCCCAGGGCACCCGCAGCTC...GCAGCATGATTTGCCTGTCGACTCTAAACTGATTGCTCGGGGCACCCTTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CCA 90 bp TGCATGGCTGGAAGTGTGACTTGGAGCCCTGGCCTACCAGGTGAATCAGCTGCAGGACCCCGCTGCTCGTaGCCAGCACCTTGCCATCAT +
Preference number: 4 (lower is better)
Translates to: CMAGSVTWSPGLPGESAAGPRCS*PAPCHH
Trigger: ATGATGGCAAGGTGCTGGCCACGAGCAGCGGGGTCC...TGCAGCTGATTCACCTGGTAGGCCAGGGCTCCAAGTCACACTTCCAGCCATGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CCA 90 bp GATCCAGAGAAGAGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGCACCCTGGGGCTGACTaGAGGCCACCAGTCGACTGC +
Preference number: 4 (lower is better)
Translates to: DPEKRERDQLSALQCPPGHPGAD*RPPVDC
Trigger: GCAGTCGACTGGTGGCCTCCAGTCAGCCCCAGGGTG...CCCTGGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCTCTTCTCTGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp GAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCTGGGCAGCCACCCTCAGGGCATTaGGGGAAGCCAGGACATGGA +
Preference number: 4 (lower is better)
Translates to: EISSVLFSVLQGQHPPGQPPSGH*GKPGHG
Trigger: TCCATGTCCTGGCTTCCCCCAATGCCCTGAGGGTGG...CTGCCCAGGAGGGTGTTGACCCTGGAGGACACTGAAGAGCACTGAGCTGATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp TATTGGGAGGACATTCTGGACGGGCTCCCAGCAAGAGTCTGGCAATGGAGCATGAGTACCAGATGGCCGTaGTGCCGTCGGGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: YWEDILDGLPARVWQWSMSTRWP*CRRAPP
Trigger: TGGAGGTGCCCGACGGCATCACGGCCATCTGGTACT...CATGCTCCATTGCCAGACTCTTGCTGGGAGCCCGTCCAGAATGTCCTCCCAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR TCA 90 bp AGGAGATCCAGAGAAGAGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCGTGAGCTGGGCCGGGTaGGTGGTCCACACAAGGCAG +
Preference number: 4 (lower is better)
Translates to: RRSREERARSAQCSSVSSVSWAG*VVHTRQ
Trigger: CTGCCTTGTGTGGACCACTCACCCGGCCCAGCTCAC...GGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCTCTTCTCTGGATCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR TCA 90 bp CACACAAGGGTGCCCCGAGCAATCAGTTTAGAGTCGACAGGCAAATCATGCTGCCACGAGCCACGTGGGTaGAGGCGAGAGTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: HTRVPRAISLESTGKSCCHEPRG*RREWAQ
Trigger: CTGTGCCCACTCTCGCCTTCACCCACGTGGCTCGTG...GCAGCATGATTTGCCTGTCGACTCTAAACTGATTGCTCGGGGCACCCTTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR GCA 90 bp TATTGGGAGGACATTCTGGACGGGCTCCCAGCAAGAGTCTGGCAATGGAGCATGCGGCGGTGCTGGACCTaGGGAGAGGAGAACAGGAAG +
Preference number: 4 (lower is better)
Translates to: YWEDILDGLPARVWQWSMRRCWT*GEENRK
Trigger: CTTCCTGTTCTCCTCTCCGCAGGTCCAGCACCGCCG...CATGCTCCATTGCCAGACTCTTGCTGGGAGCCCGTCCAGAATGTCCTCCCAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp CACTCAAGAGCTCTCTCCTGTTGGTCCCTGATTCGCAGGGGCACGTCATTCCTTGACCCCTTCACACCCTaGACGTCCTGGGGACTGGAG +
Preference number: 4 (lower is better)
Translates to: HSRALSCWSLIRRGTSFLDPFTP*TSWGLE
Trigger: CTCCAGTCCCCAGGACGTGCAGGGTGTGAAGGGGTC...AAGGAATGACGTGCCCCTGCGAATCAGGGACCAACAGGAGAGAGCTCTTGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp CACTCAAGAGCTCTCTCCTGTTGGTCCCTGATTCGCAGGGGCACGTCATTCCTTGGCGGCTGTCCACAGTaGACAGTACCAGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: HSRALSCWSLIRRGTSFLGGCPQ*TVPGPA
Trigger: AGCTGGCCCTGGTACTGTGCACTGTGGACAGCCGCC...AAGGAATGACGTGCCCCTGCGAATCAGGGACCAACAGGAGAGAGCTCTTGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp ATTCATAGGCTGGAGTCATCACAGATTCTGGCCACTTTCTCCTCCGGAGGGCAGGCAAGAGTAGGCGCCTaGATGAGCCCGCGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: IHRLESSQILATFSSGGQARVGA*MSPRGH
Trigger: GTGGCCACGCGGGCTCATGCAGGCGCCTACTCTTGC...CTGCCCTCCGGAGGAGAAAGTGGCCAGAATCTGTGATGACTCCAGCCTATGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp ATCTGGAGCAGGAATAAGGATGCTGACAACATCTGTGTCTGCCCTCCACTCTTGGACGGGAGCTGCGGGTaGCCTGGGCATCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: IWSRNKDADNICVCPPLLDGSCG*PGHPGP
Trigger: AGGCCCAGGATGCCCAGGGCACCCGCAGCTCCCGTC...CAAGAGTGGAGGGCAGACACAGATGTTGTCAGCATCCTTATTCCTGCTCCAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp CTGGCCCTCAGTAGATGGGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCGGCACATCTTGCACCTaGAGCCGTAGGGCGTTTCGG +
Preference number: 4 (lower is better)
Translates to: LALSRWALRQNMACWWHSGTSCT*SRRAFR
Trigger: CCGAAACGCCCTACGGCTGCAGGTGCAAGATGTGCC...GGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACTGAGGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp GATCCAGAGAAGAGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGCCTGCAGGCACATCTTaGACCTGCAGCCGTAGGGCG +
Preference number: 4 (lower is better)
Translates to: DPEKRERDQLSALQCPPGPAGTS*TCSRRA
Trigger: CGCCCTACGGCTGCAGGTGCAAGATGTGCCTGCAGG...CCCTGGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCTCTTCTCTGGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp AGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCCGTGCACCTTCTACCTaGAACCGCCCGATGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RERDQLSALQCPPGSTPSRAPST*NRPMVL
Trigger: CAGCACCATCGGGCGGTTGCAGGTAGAAGGTGCACG...GGAGGGTGTTGACCCTGGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp TATTGGGAGGACATTCTGGACGGGCTCCCAGCAAGAGTCTGGCAATGGAGCATGACACCCTGCACGTCCTaGGGACTGGAGACGCCCCAT +
Preference number: 4 (lower is better)
Translates to: YWEDILDGLPARVWQWSMTPCTS*GLETPH
Trigger: ATGGGGCGTCTCCAGTCCCCAGGACGTGCAGGGTGT...CATGCTCCATTGCCAGACTCTTGCTGGGAGCCCGTCCAGAATGTCCTCCCAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp CAACATCTGTGTCTGCCCTCCACTCTTGTAAGGGCCAGTAAGGTAGTACCCAGTTTGGGGTCCGCCGAGTaGCTCACCACCTGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: QHLCLPSTLVRASKVVPSLGSAE*LTTCRW
Trigger: CCAGCGGCAGGTGGTGAGCCACTCGGCGGACCCCAA...ACTGGGTACTACCTTACTGGCCCTTACAAGAGTGGAGGGCAGACACAGATGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp AGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCCGGAGGGTATGGGAGTaGGCATCCTCCAGCAGGACA +
Preference number: 4 (lower is better)
Translates to: RERDQLSALQCPPGSTPSRRVWE*ASSSRT
Trigger: TGTCCTGCTGGAGGATGCCCACTCCCATACCCTCCG...GGAGGGTGTTGACCCTGGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp GATCCAGAGAAGAGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGGTCTCCAGGGGACCCTaGGCCCACAGCACCCCATTT +
Preference number: 4 (lower is better)
Translates to: DPEKRERDQLSALQCPPGVSRGP*AHSTPF
Trigger: AAATGGGGTGCTGTGGGCCCAGGGTCCCCTGGAGAC...CCCTGGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCTCTTCTCTGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp AGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCGGGCAGCATCAGTTCTaGCCACGGGCAGCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: RERDQLSALQCPPGSTPSGQHQF*PRAAVS
Trigger: TGACACTGCTGCCCGTGGCCAGAACTGATGCTGCCC...GGAGGGTGTTGACCCTGGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp GATCCAGAGAAGAGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGCTGCAAAGCGGAGCGTaGCCGAGGTCGACTCCTGGA +
Preference number: 4 (lower is better)
Translates to: DPEKRERDQLSALQCPPGLQSGA*PRSTPG
Trigger: TCCAGGAGTCGACCTCGGCCACGCTCCGCTTTGCAG...CCCTGGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCTCTTCTCTGGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp ATTCATAGGCTGGAGTCATCACAGATTCTGGCCACTTTCTCCTCCGGAGGGCAGCGTTGGGCAGGGGGATaGAGTGGGCATCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: IHRLESSQILATFSSGGQRWAGG*SGHPGA
Trigger: AGCGCCTGGATGCCCACTCCATCCCCCTGCCCAACG...CTGCCCTCCGGAGGAGAAAGTGGCCAGAATCTGTGATGACTCCAGCCTATGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp TGCAATCCAACCAAAGTCCAGGGTGACTTTCGAGGAGAAGGATGTGAAAGGGCAAAGAGGCGACCGGCGTaGCTGAGGGCCAGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: CNPTKVQGDFRGEGCERAKRRPA*LRASWA
Trigger: CGCCCAGCTGGCCCTCAGCCACGCCGGTCGCCTCTT...TGCCCTTTCACATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTTGGATTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp AGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCCCATGGATCTGGCCCTaGAGTCCCGGAAGGAGGACA +
Preference number: 4 (lower is better)
Translates to: RERDQLSALQCPPGSTPSPWIWP*SPGRRT
Trigger: TGTCCTCCTTCCGGGACTCCAGGGCCAGATCCATGG...GGAGGGTGTTGACCCTGGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp AGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCGGCCAGCTCAGCAGGTaGCTCACTGTCCACAGTGCA +
Preference number: 4 (lower is better)
Translates to: RERDQLSALQCPPGSTPSGQLSR*LTVHSA
Trigger: TGCACTGTGGACAGTGAGCCACCTGCTGAGCTGGCC...GGAGGGTGTTGACCCTGGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp AGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCCAGATGTATTCCCCTTaGTCGCTGGGCCTCAGCGCC +
Preference number: 4 (lower is better)
Translates to: RERDQLSALQCPPGSTPSQMYSP*SLGLSA
Trigger: GGCGCTGAGGCCCAGCGACCAAGGGGAATACATCTG...GGAGGGTGTTGACCCTGGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp CAACATCTGTGTCTGCCCTCCACTCTTGTAAGGGCCAGTAAGGTAGTACCCAGTGGCAGGCAACACCACTaGTCAGCCCAGGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: QHLCLPSTLVRASKVVPSGRQHH*SAQGWG
Trigger: GCCCCACCCCTGGGCTGACCAGTGGTGTTGCCTGCC...ACTGGGTACTACCTTACTGGCCCTTACAAGAGTGGAGGGCAGACACAGATGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp CCAGATGCCAGTTGGCACTGTGGGTTAGCTGGGTATTATATCTGCCCGTGTGTGGCCAGGGGCACACCCTaGCCCTCAGTAGATGGGCAC +
Preference number: 4 (lower is better)
Translates to: PDASWHCGLAGYYICPCVARGTP*PSVDGH
Trigger: GTGCCCATCTACTGAGGGCCAGGGTGTGCCCCTGGC...CACACACGGGCAGATATAATACCCAGCTAACCCACAGTGCCAACTGGCATCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CCA 90 bp AGGAGATCCAGAGAAGAGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCCCGCTCCCCACAGGCTaGCTCCAGACCACAAGAGCG +
Preference number: 4 (lower is better)
Translates to: RRSREERARSAQCSSVSSPLPTG*LQTTRA
Trigger: CGCTCTTGTGGTCTGGAGCCAGCCTGTGGGGAGCGG...GGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCTCTTCTCTGGATCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR TCA 90 bp TCATTCACATTCATAGGCTGGAGTCATCACAGATTCTGGCCACTTTCTCCTCCGGCTCGGGGTTCCCCATaGACTCGGTGCGGCCGCGGA +
Preference number: 4 (lower is better)
Translates to: SFTFIGWSHHRFWPLSPPARGSP*TRCGRG
Trigger: TCCGCGGCCGCACCGAGTTCATGGGGAACCCCGAGC...CGGAGGAGAAAGTGGCCAGAATCTGTGATGACTCCAGCCTATGAATGTGAATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR TCA 90 bp GGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGTCCTCCCCGAGGGGCTaGGGAGGATCTTCACACCCT +
Preference number: 4 (lower is better)
Translates to: GLLVAFPTMSKVSGMSSQSSPRG*GGSSHP
Trigger: AGGGTGTGAAGATCCTCCTCAGCCCCTCGGGGAGGA...CTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR TCA 90 bp GCGTCCACCATGGGCATGGGTGTGCTTCTACCTCCACTCTTCCTTCTTCTGGCTCCGATACCAACGATATaGGGTCCCCTCTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: ASTMGMGVLLPPLFLLLAPIPTI*GPLWDS
Trigger: GGAGTCCCAGAGGGGACCTCATATCGTTGGTATCGG...AGCCAGAAGAAGGAAGAGTGGAGGTAGAAGCACACCCATGCCCATGGTGGACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR TCA 90 bp ATTCATAGGCTGGAGTCATCACAGATTCTGGCCACTTTCTCCTCCGGAGGGCAGGACATGGCCTGTCCCTaGTGCCAAGCTGTGGACCCC +
Preference number: 4 (lower is better)
Translates to: IHRLESSQILATFSSGGQDMACP*CQAVDP
Trigger: GGGGTCCACAGCTTGGCATCAGGGACAGGCCATGTC...CTGCCCTCCGGAGGAGAAAGTGGCCAGAATCTGTGATGACTCCAGCCTATGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp GGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGAGCAGCTGCTGGAACTaGTGCAGGCGGTGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GLLVAFPTMSKVSGMSSQSSCWN*CRRCRA
Trigger: AGCCCTGCACCGCCTGCATCAGTTCCAGCAGCTGCT...CTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp GGTCAGCCCAGGGGTGGGGCACAGGTTGAGGTCTCACATGTGGCTGCATCAGGAGAGCTCACACAGTCATaGACAGAGATGCATCTGGAG +
Preference number: 4 (lower is better)
Translates to: GQPRGGAQVEVSHVAASGELTQS*TEMHLE
Trigger: CTCCAGATGCATCTCTGTTCATGACTGTGTGAGCTC...TCCTGATGCAGCCACATGTGAGACCTCAACCTGTGCCCCACCCCTGGGCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR GCA 90 bp GGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGGCAGGGTCCTGGCCTTaGCACTGCAGTCTGACCTGC +
Preference number: 4 (lower is better)
Translates to: GLLVAFPTMSKVSGMSSQAGSWP*HCSLTC
Trigger: GCAGGTCAGACTGCAGTGGCAAGGCCAGGACCCTGC...CTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp GATCCAGAGAAGAGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGGCTGCCTGGGGCAGGTaGAGCACACCAGTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: DPEKRERDQLSALQCPPGAAWGR*STPVLV
Trigger: AACCAAGACTGGTGTGCTGCACCTGCCCCAGGCAGC...CCCTGGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCTCTTCTCTGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp CAGCCAATGGGAAGTGAGTGGAAAAGTCCTGTGCAGCTTCTGAGTTGCGTCCACTTCCACCACCTCGGCTaGCGGGCTGATGAGGAGACG +
Preference number: 4 (lower is better)
Translates to: QPMGSEWKSPVQLLSCVHFHHLG*RADEET
Trigger: CGTCTCCTCATCAGCCCGGCAGCCGAGGTGGTGGAA...GTGGACGCAACTCAGAAGCTGCACAGGACTTTTCCACTCACTTCCCATTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp GGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGCTGGTGGCCAGGAGGTaGTCCCCATGGAACAAGGCC +
Preference number: 4 (lower is better)
Translates to: GLLVAFPTMSKVSGMSSQLVARR*SPWNKA
Trigger: GGCCTTGTTCCATGGGGAGCACCTCCTGGCCACCAG...CTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp ATTCATAGGCTGGAGTCATCACAGATTCTGGCCACTTTCTCCTCCGGAGGGCAGCCTCACAGCGGTAGCTaGCAGAGTCCCCAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: IHRLESSQILATFSSGGQPHSGS*QSPQGP
Trigger: TGGGCCTTGGGGACTCTGGCAGCTACCGCTGTGAGG...CTGCCCTCCGGAGGAGAAAGTGGCCAGAATCTGTGATGACTCCAGCCTATGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp GCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTGACGGGAGCTGCGGGTaGCCTGGGCATCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: AFPTMSKVSGMSSQLGVLDGSCG*PGHPGP
Trigger: AGGCCCAGGATGCCCAGGGCACCCGCAGCTCCCGTC...AAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp GCGTCCACCATGGGCATGGGTGTGCTTCTACCTCCACTCTTCCTTCTTCTGGCTTGGAATGAGGGAGGGTaGGGCCTCGGCTACACAAAG +
Preference number: 4 (lower is better)
Translates to: ASTMGMGVLLPPLFLLLAWNEGG*GLGYTK
Trigger: CTTTGTGTAGCCGAGGCCGCACCCTCCCTCATTCCA...AGCCAGAAGAAGGAAGAGTGGAGGTAGAAGCACACCCATGCCCATGGTGGACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp GATCCAGAGAAGAGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTGTTGCCTAAGAGGGTaGTGCGCACTGCGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: DPEKRERDQLSALQCPPGCCLRG*CALRWL
Trigger: CAGCCAGCGCAGTGCGCACCACCCTCTTAGGCAACA...CCCTGGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCTCTTCTCTGGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp GGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCGGGCCTCCACCAGCTTaGGGTCCGCCGAGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: GTETKHGLLVAFPTMSKVGPPPA*GPPSGS
Trigger: TGAGCCACTCGGCGGACCCCAAGCTGGTGGAGGCCC...GACTTTTGACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp GGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTTGGCCACGGAGAGCTaGCAGCGCAGGATCCGGCCG +
Preference number: 4 (lower is better)
Translates to: GTETKHGLLVAFPTMSKVLATES*QRRIRP
Trigger: CGGCCGGATCCTGCGCTGCCAGCTCTCCGTGGCCAA...GACTTTTGACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp GATCCAGAGAAGAGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGGGTGACCTTCATGCGTaGGGAACAGCCCCCACAGGT +
Preference number: 4 (lower is better)
Translates to: DPEKRERDQLSALQCPPGGDLHA*GTAPTG
Trigger: ACCTGTGGGGGCTGTTCCCCACGCATGAAGGTCACC...CCCTGGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCTCTTCTCTGGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp AGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCGCCTCAGCTTTAGCCTaGAACCGACCATGGGATGGG +
Preference number: 4 (lower is better)
Translates to: RERDQLSALQCPPGSTPSASALA*NRPWDG
Trigger: CCCATCCCATGGTCGGTTCCAGGCTAAAGCTGAGGC...GGAGGGTGTTGACCCTGGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp TATTGGGAGGACATTCTGGACGGGCTCCCAGCAAGAGTCTGGCAATGGAGCATGGAGTGTGACGTGGCGTaGGGCATAGGACACGTGGAG +
Preference number: 4 (lower is better)
Translates to: YWEDILDGLPARVWQWSMECDVA*GIGHVE
Trigger: CTCCACGTGTCCTATGCCCCACGCCACGTCACACTC...CATGCTCCATTGCCAGACTCTTGCTGGGAGCCCGTCCAGAATGTCCTCCCAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp AGTAGATGGGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTGGCAGGGGGATGGAGTaGGCATCCAGGCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SRWALRQNMACWWHSQQCGRGME*ASRRCC
Trigger: GCAGCAGCGCCTGGATGCCCACTCCATCCCCCTGCC...ACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp AGTAGATGGGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCTCATCCCTGGGCTGTaGCCCTCGCAGCTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: SRWALRQNMACWWHSQQCLIPGL*PSQLQA
Trigger: CGCCTGGAGCTGCGAGGGCCACAGCCCAGGGATGAG...ACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp GATCCAGAGAAGAGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGAGAAACCCTCATCCCTaGGCTGTGGCCCTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: DPEKRERDQLSALQCPPGRNPHP*AVALAA
Trigger: AGCTGCGAGGGCCACAGCCCAGGGATGAGGGTTTCT...CCCTGGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCTCTTCTCTGGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp CAACATCTGTGTCTGCCCTCCACTCTTGTAAGGGCCAGTAAGGTAGTACCCAGTCCTGATGCCAAGCTGTaGACCCCGCTGCTCGTGGCC +
Preference number: 4 (lower is better)
Translates to: QHLCLPSTLVRASKVVPSPDAKL*TPLLVA
Trigger: GGCCACGAGCAGCGGGGTCCACAGCTTGGCATCAGG...ACTGGGTACTACCTTACTGGCCCTTACAAGAGTGGAGGGCAGACACAGATGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp CAGTCTCCAGATGCCAGTTGGCACTGTGGGTTAGCTGGGTATTATATCTGCCCGCGGGCCACCTGGACATaGCCTGTCCCTGATGCCAAG +
Preference number: 4 (lower is better)
Translates to: QSPDASWHCGLAGYYICPRATWT*PVPDAK
Trigger: CTTGGCATCAGGGACAGGCCATGTCCAGGTGGCCCG...CGGGCAGATATAATACCCAGCTAACCCACAGTGCCAACTGGCATCTGGAGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CCA 90 bp GCGTCCACCATGGGCATGGGTGTGCTTCTACCTCCACTCTTCCTTCTTCTGGCTTCATGGTGGGCGTCTTaGGAGGGTAGAGCACACGGA +
Preference number: 4 (lower is better)
Translates to: ASTMGMGVLLPPLFLLLASWWAS*EGRAHG
Trigger: TCCGTGTGCTCTACCCTCCCAAGACGCCCACCATGA...AGCCAGAAGAAGGAAGAGTGGAGGTAGAAGCACACCCATGCCCATGGTGGACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp CAACATCTGTGTCTGCCCTCCACTCTTGTAAGGGCCAGTAAGGTAGTACCCAGTGGTGGAGAGTCAGGCTaGCGAGCGGCTCGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: QHLCLPSTLVRASKVVPSGGESG*RAARCP
Trigger: TGGACAGCGAGCCGCTCGCCAGCCTGACTCTCCACC...ACTGGGTACTACCTTACTGGCCCTTACAAGAGTGGAGGGCAGACACAGATGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp ATTCATAGGCTGGAGTCATCACAGATTCTGGCCACTTTCTCCTCCGGAGGGCAGCAGGCGGTGCAGGGCTaGAACACAGAGCGGGACTCA +
Preference number: 4 (lower is better)
Translates to: IHRLESSQILATFSSGGQQAVQG*NTERDS
Trigger: TGAGTCCCGCTCTGTGTTCCAGCCCTGCACCGCCTG...CTGCCCTCCGGAGGAGAAAGTGGCCAGAATCTGTGATGACTCCAGCCTATGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419548.4
3UTR CAA 72 bp GGGGGAGTCACTAGCCCACTCAAGAGCTCTCTCCTGTaGGTCCCTGATTCGCAGGGGCACGTCATTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GGVTSPLKSSLL*VPDSQGHVIPS
Trigger: AGAAGGAATGACGTGCCCCTGCGAATCAGGGACCAACAGGAGAGAGCTCTTGAGTGGGCTAGTGACTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp CAACATCTGTGTCTGCCCTCCACTCTTGTAAGGGCCAGTAAGGTAGTACCCAGTGGTACCATGTGTAGGTaGGCTGGGCCGGGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: QHLCLPSTLVRASKVVPSGTMCR*AGPGEW
Trigger: CCACTCACCCGGCCCAGCTCACCTACACATGGTACC...ACTGGGTACTACCTTACTGGCCCTTACAAGAGTGGAGGGCAGACACAGATGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR TCA 90 bp GAGGTCTCACATGTGGCTGCATCAGGATCAATGAGCTTCCCACAGAGAAAACCCCCGCACAGGTCACTGTaGTGGGGGCACCTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: EVSHVAASGSMSFPQRKPPHRSL*WGHLQA
Trigger: TGCCTGAAGGTGCCCCCATCACAGTGACCTGTGCGG...GGGTTTTCTCTGTGGGAAGCTCATTGATCCTGATGCAGCCACATGTGAGACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR TCA 90 bp TGCTGCAATCCAACCAAAGTCCAGGGTGACTTTCGAGGAGAAGGATGTGAAAGGCACGAGCCACGTGGGTaGAGGCGAGAGTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: CCNPTKVQGDFRGEGCERHEPRG*RREWAQ
Trigger: CTGTGCCCACTCTCGCCTTCACCCACGTGGCTCGTG...CCTTTCACATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTTGGATTGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp GACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATGGAGCACCCTGGGGCTaGCTGGAGGCCACCAGTCGA +
Preference number: 4 (lower is better)
Translates to: DKTWPAGGIPNNVKSLRDGAPWG*LEATSR
Trigger: TCGACTGGTGGCCTCCAGTCAGCCCCAGGGTGCTCC...ATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp TGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCTGGGCAGACCTCTCACCACCTCAGTAGATGGGCACTaGGACAAAACATGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: CSSVSSRVNTLLGRPLTTSVDGH*DKTWPA
Trigger: AGCAGGCCATGTTTTGTCTCAGTGCCCATCTACTGA...GGTGGTGAGAGGTCTGCCCAGGAGGGTGTTGACCCTGGAGGACACTGAAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp TGCTGCAATCCAACCAAAGTCCAGGGTGACTTTCGAGGAGAAGGATGTGAAAGGAGCATCGCTCCAGGCTaGCTGGGGCAGGTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: CCNPTKVQGDFRGEGCERSIAPG*LGQVQH
Trigger: GTGCTGCACCTGCCCCAGGCAGCCTGGAGCGATGCT...CCTTTCACATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTTGGATTGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp CAGCCAATGGGAAGTGAGTGGAAAAGTCCTGTGCAGCTTCTGAGTTGCGTCCACCAGAGCAGTGAAGGATaGCCACAAGTCCCGCCTGGG +
Preference number: 4 (lower is better)
Translates to: QPMGSEWKSPVQLLSCVHQSSEG*PQVPPG
Trigger: CCCAGGCGGGACTTGTGGGCATCCTTCACTGCTCTG...GTGGACGCAACTCAGAAGCTGCACAGGACTTTTCCACTCACTTCCCATTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp ATCTGGAGCAGGAATAAGGATGCTGACAACATCTGTGTCTGCCCTCCACTCTTGAGCCCCCACAGGTGCTaGAGCCACCCCCTGATGGCA +
Preference number: 4 (lower is better)
Translates to: IWSRNKDADNICVCPPLLSPHRC*SHPLMA
Trigger: TGCCATCAGGGGGTGGCTGCAGCACCTGTGGGGGCT...CAAGAGTGGAGGGCAGACACAGATGTTGTCAGCATCCTTATTCCTGCTCCAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp GGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGAGTATAGAGTGTGGGTaGGTGGGCAGCAGGGTCCGC +
Preference number: 4 (lower is better)
Translates to: GLLVAFPTMSKVSGMSSQSIECG*VGSRVR
Trigger: GCGGACCCTGCTGCCCACGCACCCACACTCTATACT...CTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp TCATTCACATTCATAGGCTGGAGTCATCACAGATTCTGGCCACTTTCTCCTCCGGGCACAGGCTCCGCGTaGAGCCGCCGGTCATTCCAG +
Preference number: 4 (lower is better)
Translates to: SFTFIGWSHHRFWPLSPPGTGSA*SRRSFQ
Trigger: CTGGAATGACCGGCGGCTGCACGCGGAGCCTGTGCC...CGGAGGAGAAAGTGGCCAGAATCTGTGATGACTCCAGCCTATGAATGTGAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp TGCAATCCAACCAAAGTCCAGGGTGACTTTCGAGGAGAAGGATGTGAAAGGGCACTCGGCAATCCAGGATaGCCCGGAGGCCACCCTCAG +
Preference number: 4 (lower is better)
Translates to: CNPTKVQGDFRGEGCERALGNPG*PGGHPQ
Trigger: CTGAGGGTGGCCTCCGGGGCATCCTGGATTGCCGAG...TGCCCTTTCACATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTTGGATTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp TGCATGGCTGGAAGTGTGACTTGGAGCCCTGGCCTACCAGGTGAATCAGCTGCAAGAGCTGGGCTTTTGTaGAGAGTGGCCTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: CMAGSVTWSPGLPGESAARAGLL*RVAWEM
Trigger: CATCTCCCAGGCCACTCTGCACAAAAGCCCAGCTCT...TGCAGCTGATTCACCTGGTAGGCCAGGGCTCCAAGTCACACTTCCAGCCATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR GCA 90 bp GGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCGCTGCAGGCCCCCAGTaGTTCCTTCCAAGGGGACCC +
Preference number: 4 (lower is better)
Translates to: GTETKHGLLVAFPTMSKVAAGPQ*FLPRGP
Trigger: GGGTCCCCTTGGAAGGAAGCACTGGGGGCCTGCAGC...GACTTTTGACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CCA 90 bp GGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCGCACGTCCTGGGGACTaGAGACGCCCCATGAGGCCT +
Preference number: 4 (lower is better)
Translates to: GTETKHGLLVAFPTMSKVARPGD*RRPMRP
Trigger: AGGCCTCATGGGGCGTCTCCAGTCCCCAGGACGTGC...GACTTTTGACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp TATTGGGAGGACATTCTGGACGGGCTCCCAGCAAGAGTCTGGCAATGGAGCATGGGTACCACTGAAGCGTaGGCTGTGATCACTGTCCCC +
Preference number: 4 (lower is better)
Translates to: YWEDILDGLPARVWQWSMGTTEA*AVITVP
Trigger: GGGGACAGTGATCACAGCCCACGCTTCAGTGGTACC...CATGCTCCATTGCCAGACTCTTGCTGGGAGCCCGTCCAGAATGTCCTCCCAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp AGGAGATCCAGAGAAGAGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCCGGGCGGCATTGGCATaGAAGTCCAGGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: RRSREERARSAQCSSVSSRAALA*KSRVEV
Trigger: AACCTCCACCCTGGACTTCCATGCCAATGCCGCCCG...GGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCTCTTCTCTGGATCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp CAGCCAATGGGAAGTGAGTGGAAAAGTCCTGTGCAGCTTCTGAGTTGCGTCCACACAACACGGTCCTTGTaGAGCAGCTGCAGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: QPMGSEWKSPVQLLSCVHTTRSL*SSCSLA
Trigger: CGCCAGGCTGCAGCTGCTCCACAAGGACCGTGTTGT...GTGGACGCAACTCAGAAGCTGCACAGGACTTTTCCACTCACTTCCCATTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp ATCTGGAGCAGGAATAAGGATGCTGACAACATCTGTGTCTGCCCTCCACTCTTGGTGCAGCTAGGCTCGTaGTGGCTGAGCCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: IWSRNKDADNICVCPPLLVQLGS*WLSLGP
Trigger: AGGCCCCAGGCTCAGCCACCACGAGCCTAGCTGCAC...CAAGAGTGGAGGGCAGACACAGATGTTGTCAGCATCCTTATTCCTGCTCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp CACTCAAGAGCTCTCTCCTGTTGGTCCCTGATTCGCAGGGGCACGTCATTCCTTTCCAGCATAGCCCCGTaGATCTCCAGACGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: HSRALSCWSLIRRGTSFLSSIAP*ISRRSV
Trigger: CACACTGCGTCTGGAGATCCACGGGGCTATGCTGGA...AAGGAATGACGTGCCCCTGCGAATCAGGGACCAACAGGAGAGAGCTCTTGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp TGCAATCCAACCAAAGTCCAGGGTGACTTTCGAGGAGAAGGATGTGAAAGGGCACCTGATGCCAAGCTGTaGACCCCGCTGCTCGTGGCC +
Preference number: 4 (lower is better)
Translates to: CNPTKVQGDFRGEGCERAPDAKL*TPLLVA
Trigger: GGCCACGAGCAGCGGGGTCCACAGCTTGGCATCAGG...TGCCCTTTCACATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTTGGATTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp GAGGTCTCACATGTGGCTGCATCAGGATCAATGAGCTTCCCACAGAGAAAACCCAGCCCACAACCAGAATaGCCAGGGGCACACCCTGGC +
Preference number: 4 (lower is better)
Translates to: EVSHVAASGSMSFPQRKPSPQPE*PGAHPG
Trigger: GCCAGGGTGTGCCCCTGGCCATTCTGGTTGTGGGCT...GGGTTTTCTCTGTGGGAAGCTCATTGATCCTGATGCAGCCACATGTGAGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CCA 90 bp GCGTCCACCATGGGCATGGGTGTGCTTCTACCTCCACTCTTCCTTCTTCTGGCTATTGGGAGGACATTCTaGACGGGCTCCCAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: ASTMGMGVLLPPLFLLLAIGRTF*TGSQQE
Trigger: CTCTTGCTGGGAGCCCGTCCAGAATGTCCTCCCAAT...AGCCAGAAGAAGGAAGAGTGGAGGTAGAAGCACACCCATGCCCATGGTGGACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp CCAGATGCCAGTTGGCACTGTGGGTTAGCTGGGTATTATATCTGCCCGTGTGTGGGCTTTTGTGCAGAGTaGCCTGGGAGATGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: PDASWHCGLAGYYICPCVGFCAE*PGRWSP
Trigger: GGGGCTCCATCTCCCAGGCCACTCTGCACAAAAGCC...CACACACGGGCAGATATAATACCCAGCTAACCCACAGTGCCAACTGGCATCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CCA 90 bp CCAGATGCCAGTTGGCACTGTGGGTTAGCTGGGTATTATATCTGCCCGTGTGTGTCCCCAACCTCCCCTTaGTCCCAGGCACCATCCTCT +
Preference number: 4 (lower is better)
Translates to: PDASWHCGLAGYYICPCVSPTSP*SQAPSS
Trigger: AGAGGATGGTGCCTGGGACCAAGGGGAGGTTGGGGA...CACACACGGGCAGATATAATACCCAGCTAACCCACAGTGCCAACTGGCATCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR TCA 90 bp CAGCCAATGGGAAGTGAGTGGAAAAGTCCTGTGCAGCTTCTGAGTTGCGTCCACGCCTGCTGGGAAGAATaGGGCCAGGAGGAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: QPMGSEWKSPVQLLSCVHACWEE*GQEEKL
Trigger: AAGCTTCTCCTCCTGGCCTCATTCTTCCCAGCAGGC...GTGGACGCAACTCAGAAGCTGCACAGGACTTTTCCACTCACTTCCCATTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR TCA 90 bp TCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAATGTCCTACTGGAGACGCCCCATaGGGCCTGGCCTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: SGMSSQLGVLWKSNSKCPTGDAP*GLACWE
Trigger: TTCCCAGCAGGCCAGGCCTCATGGGGCGTCTCCAGT...AGGACATTTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR TCA 90 bp AGTAGATGGGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCTGAAGCGTGGGCTGTaGTCACTGTCCCCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SRWALRQNMACWWHSQQCLKRGL*SLSPEV
Trigger: CACCTCCGGGGACAGTGATCACAGCCCACGCTTCAG...ACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR TCA 90 bp TGCAATCCAACCAAAGTCCAGGGTGACTTTCGAGGAGAAGGATGTGAAAGGGCAGCCATTGAAGGTGGCTaGGGTGGAGGCGTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: CNPTKVQGDFRGEGCERAAIEGG*GGGVAQ
Trigger: CTGGGCAACGCCTCCACCTCAGCCACCTTCAATGGC...TGCCCTTTCACATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTTGGATTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR TCA 90 bp CAGTCTCCAGATGCCAGTTGGCACTGTGGGTTAGCTGGGTATTATATCTGCCCGCCCGATGGTGCTGATTaGGCCCAGCAAGTTTTGGGC +
Preference number: 4 (lower is better)
Translates to: QSPDASWHCGLAGYYICPPDGAD*AQQVLG
Trigger: GCCCAAAACTTGCTGGGCTCAATCAGCACCATCGGG...CGGGCAGATATAATACCCAGCTAACCCACAGTGCCAACTGGCATCTGGAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR TCA 90 bp TCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAATGTCCTGGCGGTGCAGGGCTCTaGCCCCAAAGTAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SGMSSQLGVLWKSNSKCPGGAGL*PQSRWR
Trigger: CCTCCACCTACTTTGGGGTCAGAGCCCTGCACCGCC...AGGACATTTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR TCA 90 bp GGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGTCTCCTGTTGGTCCCTaGTTCGCAGGGGCACGTCAT +
Preference number: 4 (lower is better)
Translates to: GLLVAFPTMSKVSGMSSQSPVGP*FAGARH
Trigger: ATGACGTGCCCCTGCGAATCAGGGACCAACAGGAGA...CTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp CCAGATGCCAGTTGGCACTGTGGGTTAGCTGGGTATTATATCTGCCCGTGTGTGTCTCCTGTTGGTCCCTaGTTCGCAGGGGCACGTCAT +
Preference number: 4 (lower is better)
Translates to: PDASWHCGLAGYYICPCVSPVGP*FAGARH
Trigger: ATGACGTGCCCCTGCGAATCAGGGACCAACAGGAGA...CACACACGGGCAGATATAATACCCAGCTAACCCACAGTGCCAACTGGCATCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR GCA 90 bp TGCTGCAATCCAACCAAAGTCCAGGGTGACTTTCGAGGAGAAGGATGTGAAAGGGGCTCCCCAGGGCTCTaGCGGCTCAAGAGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: CCNPTKVQGDFRGEGCERGSPGL*RLKREG
Trigger: TCCTTCTCTCTTGAGCCGGCAGAGCCCTGGGGAGCC...CCTTTCACATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTTGGATTGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp TCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAATGTCCTAAGTGGCTGCGGCGGTaGTGGACCTGCGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: SGMSSQLGVLWKSNSKCPKWLRR*WTCGEE
Trigger: CTCCTCTCCGCAGGTCCAGCACCGCCGCAGCCACTT...AGGACATTTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp GGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCCTCCAGGATGGGACCTaGTGGGCTCACCTGGACCTC +
Preference number: 4 (lower is better)
Translates to: GTETKHGLLVAFPTMSKVLQDGT*WAHLDL
Trigger: GAGGTCCAGGTGAGCCCAGCAGGTCCCATCCTGGAG...GACTTTTGACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp TGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCTGGGCAGACCTCTCACCACCCCTCATTGGGTGTGTTaGAGACTAGTGTCACTGTCT +
Preference number: 4 (lower is better)
Translates to: CSSVSSRVNTLLGRPLTTPHWVC*RLVSLS
Trigger: AGACAGTGACACTAGTCTGCAACACACCCAATGAGG...GGTGGTGAGAGGTCTGCCCAGGAGGGTGTTGACCCTGGAGGACACTGAAGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp GGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGGCAGCTCAGTGTCACTaGCTGTCCTTCCACCACCTC +
Preference number: 4 (lower is better)
Translates to: GLLVAFPTMSKVSGMSSQAAQCH*LSFHHL
Trigger: GAGGTGGTGGAAGGACAGGCAGTGACACTGAGCTGC...CTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp CTTCTTGGTAACTCATTCTCTTTAACAGCCCGACACAGGGTCTCCAGGAAAAGGGGAGCAGGAGGCTGCTaGCGGGACCCTCGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: LLGNSFSLTARHRVSRKRGAGGC*RDPREA
Trigger: TGCTTCACGAGGGTCCCGGCAGCAGCCTCCTGCTCC...CCTTTTCCTGGAGACCCTGTGTCGGGCTGTTAAAGAGAATGAGTTACCAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp ACTCAACACTGCCTCATTCACATTCATAGGCTGGAGTCATCACAGATTCTGGCCGTCAGGTTCACCAGCTaGCCCTCCCGCACGGTAGCC +
Preference number: 4 (lower is better)
Translates to: TQHCLIHIHRLESSQILAVRFTS*PSRTVA
Trigger: GGCTACCGTGCGGGAGGGGCAGCTGGTGAACCTGAC...GGCCAGAATCTGTGATGACTCCAGCCTATGAATGTGAATGAGGCAGTGTTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp CTGGCCCTCAGTAGATGGGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCGCTCACTGTCCACAGTaGACTGTATCACAGCCATGG +
Preference number: 4 (lower is better)
Translates to: LALSRWALRQNMACWWHSAHCPQ*TVSQPW
Trigger: CCATGGCTGTGATACAGTGCACTGTGGACAGTGAGC...GGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACTGAGGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp ACTCAACACTGCCTCATTCACATTCATAGGCTGGAGTCATCACAGATTCTGGCCAGCTGTGGACCCCGCTaGTCGTGGCCAGCACCTTGC +
Preference number: 4 (lower is better)
Translates to: TQHCLIHIHRLESSQILASCGPR*SWPAPC
Trigger: GCAAGGTGCTGGCCACGAGCAGCGGGGTCCACAGCT...GGCCAGAATCTGTGATGACTCCAGCCTATGAATGTGAATGAGGCAGTGTTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp GAGGTCTCACATGTGGCTGCATCAGGATCAATGAGCTTCCCACAGAGAAAACCCATGCAAAGGTGGAGTTaGCCACAGGCCCAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: EVSHVAASGSMSFPQRKPMQRWS*PQAQGH
Trigger: GTGGCCCTGGGCCTGTGGGCAACTCCACCTTTGCAT...GGGTTTTCTCTGTGGGAAGCTCATTGATCCTGATGCAGCCACATGTGAGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR GCA 90 bp AGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCCCGAATTCTCGCCCATaGTCTGCTTACAAACACGCC +
Preference number: 4 (lower is better)
Translates to: RERDQLSALQCPPGSTPSPNSRP*SAYKHA
Trigger: GGCGTGTTTGTAAGCAGAGCATGGGCGAGAATTCGG...GGAGGGTGTTGACCCTGGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp GCGTCCACCATGGGCATGGGTGTGCTTCTACCTCCACTCTTCCTTCTTCTGGCTTGGCACAAGGATGTCTaGTTAGGCAACTCCACTGCC +
Preference number: 4 (lower is better)
Translates to: ASTMGMGVLLPPLFLLLAWHKDV*LGNSTA
Trigger: GGCAGTGGAGTTGCCTAAGCAGACATCCTTGTGCCA...AGCCAGAAGAAGGAAGAGTGGAGGTAGAAGCACACCCATGCCCATGGTGGACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp ATTCATAGGCTGGAGTCATCACAGATTCTGGCCACTTTCTCCTCCGGAGGGCAGTGGAATGAGGGAGGGTaGGGCCTCGGCTACACAAAG +
Preference number: 4 (lower is better)
Translates to: IHRLESSQILATFSSGGQWNEGG*GLGYTK
Trigger: CTTTGTGTAGCCGAGGCCGCACCCTCCCTCATTCCA...CTGCCCTCCGGAGGAGAAAGTGGCCAGAATCTGTGATGACTCCAGCCTATGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp CACTCAAGAGCTCTCTCCTGTTGGTCCCTGATTCGCAGGGGCACGTCATTCCTTTTCCTCCCTAGCCCTTaGTTTAGCACAGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: HSRALSCWSLIRRGTSFLFLPSP*FSTARA
Trigger: TGCCCTGGCTGTGCTAAAGCAAGGGCTAGGGAGGAA...AAGGAATGACGTGCCCCTGCGAATCAGGGACCAACAGGAGAGAGCTCTTGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CCA 90 bp AGTAGATGGGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCAGGACATGGCCATGTaGAGGGTCTCCAGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: SRWALRQNMACWWHSQQCQDMAM*RVSRWP
Trigger: CGGCCACCTGGAGACCCTCCACATGGCCATGTCCTG...ACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp GCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTTCGCTCCAGGCTGCCTaGGGCAGGTGCAGCACACCA +
Preference number: 4 (lower is better)
Translates to: AFPTMSKVSGMSSQLGVLSLQAA*GRCSTP
Trigger: TGGTGTGCTGCACCTGCCCCAGGCAGCCTGGAGCGA...AAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp TGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCTGGGCAGACCTCTCACCACCCATTTCCAAGGGAGTTaGTGGCTGAGCACTTGTACT +
Preference number: 4 (lower is better)
Translates to: CSSVSSRVNTLLGRPLTTHFQGS*WLSTCT
Trigger: AGTACAAGTGCTCAGCCACCAACTCCCTTGGAAATG...GGTGGTGAGAGGTCTGCCCAGGAGGGTGTTGACCCTGGAGGACACTGAAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp TGCTGCAATCCAACCAAAGTCCAGGGTGACTTTCGAGGAGAAGGATGTGAAAGGGGAGACGGGCGGCATTaGCATGGAAGTCCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: CCNPTKVQGDFRGEGCERGDGRH*HGSPGW
Trigger: CCACCCTGGACTTCCATGCCAATGCCGCCCGTCTCC...CCTTTCACATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTTGGATTGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp TGCTGCAATCCAACCAAAGTCCAGGGTGACTTTCGAGGAGAAGGATGTGAAAGGAGCGGGCATCAGGTGTaGGGCTTAGGCCGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: CCNPTKVQGDFRGEGCERSGHQV*GLGRFC
Trigger: GCAGAAGCGGCCTAAGCCCCACACCTGATGCCCGCT...CCTTTCACATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTTGGATTGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp AAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAACAAGGCGATCCCCGTaGAGCAGCCGCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: KSLRDELTVGSPLEVQFQTRRSP*SSRSWA
Trigger: GGCCCAGCTGCGGCTGCTCCACGGGGATCGCCTTGT...TTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp GAGGTCTCACATGTGGCTGCATCAGGATCAATGAGCTTCCCACAGAGAAAACCCGGCCAGCTCAGCAGGTaGCTCACTGTCCACAGTGCA +
Preference number: 4 (lower is better)
Translates to: EVSHVAASGSMSFPQRKPGQLSR*LTVHSA
Trigger: TGCACTGTGGACAGTGAGCCACCTGCTGAGCTGGCC...GGGTTTTCTCTGTGGGAAGCTCATTGATCCTGATGCAGCCACATGTGAGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CCA 90 bp TGCTGCAATCCAACCAAAGTCCAGGGTGACTTTCGAGGAGAAGGATGTGAAAGGCGGGCCACCTGGACATaGCCTGTCCCTGATGCCAAG +
Preference number: 4 (lower is better)
Translates to: CCNPTKVQGDFRGEGCERRATWT*PVPDAK
Trigger: CTTGGCATCAGGGACAGGCCATGTCCAGGTGGCCCG...CCTTTCACATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTTGGATTGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp TCTAACTTTTGCTTTATCGCTGAAGCTCTCCACACAAGGGTGCCCCGAGCAATCGGGTCAACACCCTCCTaGGCAGACCTCTCACCACCC +
Preference number: 4 (lower is better)
Translates to: SNFCFIAEALHTRVPRAIGSTPS*ADLSPP
Trigger: GGGTGGTGAGAGGTCTGCCCAGGAGGGTGTTGACCC...GATTGCTCGGGGCACCCTTGTGTGGAGAGCTTCAGCGATAAAGCAAAAGTTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CCA 90 bp TGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCTGGGCAGACCTCTCACCACCAACATGGCCTGCTGGTaGCATTCCCAACAATGTCAA +
Preference number: 4 (lower is better)
Translates to: CSSVSSRVNTLLGRPLTTNMACW*HSQQCQ
Trigger: TTGACATTGTTGGGAATGCCACCAGCAGGCCATGTT...GGTGGTGAGAGGTCTGCCCAGGAGGGTGTTGACCCTGGAGGACACTGAAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp CAGTCTCCAGATGCCAGTTGGCACTGTGGGTTAGCTGGGTATTATATCTGCCCGGGGGAGAAGACGAGGTaGGCTGCCTTACCCCAATCT +
Preference number: 4 (lower is better)
Translates to: QSPDASWHCGLAGYYICPGEKTR*AALPQS
Trigger: AGATTGGGGTAAGGCAGCCCACCTCGTCTTCTCCCC...CGGGCAGATATAATACCCAGCTAACCCACAGTGCCAACTGGCATCTGGAGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CCA 90 bp ATCTGGAGCAGGAATAAGGATGCTGACAACATCTGTGTCTGCCCTCCACTCTTGCTGCAAGGCCCGGAGTaGACTCAGAGAGCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: IWSRNKDADNICVCPPLLLQGPE*TQRASP
Trigger: GGGAGAGGCTCTCTGAGTCCACTCCGGGCCTTGCAG...CAAGAGTGGAGGGCAGACACAGATGTTGTCAGCATCCTTATTCCTGCTCCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CCA 90 bp GAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCTGGGCAGCCCGTGTGTGTTGAATaGATACCTGCGTGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: EISSVLFSVLQGQHPPGQPVCVE*IPAWSL
Trigger: AAGAGACCACGCAGGTATCCATTCAACACACACGGG...CTGCCCAGGAGGGTGTTGACCCTGGAGGACACTGAAGAGCACTGAGCTGATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CCA 90 bp GCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTGGTGACGGGCAGGCTTaGGAGTGGGGAAGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: AFPTMSKVSGMSSQLGVLGDGQA*EWGRGL
Trigger: GAGGCCTCTTCCCCACTCCCAAGCCTGCCCGTCACC...AAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CCA 90 bp GGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGGCTGGAAGTGTGACTTaGAGCCCTGGCCTACCAGGT +
Preference number: 4 (lower is better)
Translates to: GLLVAFPTMSKVSGMSSQAGSVT*SPGLPG
Trigger: ACCTGGTAGGCCAGGGCTCCAAGTCACACTTCCAGC...CTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CCA 90 bp AGTAGATGGGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTGCCCCCAGCCTCAGGTaGGGTCCCAAGAGGATTGGT +
Preference number: 4 (lower is better)
Translates to: SRWALRQNMACWWHSQQCAPSLR*GPKRIG
Trigger: ACCAATCCTCTTGGGACCCCACCTGAGGCTGGGGGC...ACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CCA 90 bp GGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGCCACAGAGAAAACCCTaGTCACAGGAGGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: GLLVAFPTMSKVSGMSSQPQRKP*SQEASG
Trigger: CCCAGAGGCCTCCTGTGACCAGGGTTTTCTCTGTGG...CTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR TCA 90 bp TGCTGCAATCCAACCAAAGTCCAGGGTGACTTTCGAGGAGAAGGATGTGAAAGGGGGGGTAGAGCACAGTaGGAACAGCTGGCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: CCNPTKVQGDFRGEGCERGGRAQ*EQLAKR
Trigger: CCTCTTCGCCAGCTGTTCTCACTGTGCTCTACCCCC...CCTTTCACATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTTGGATTGCAGCA
54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR TCA 90 bp GGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGCTCCTGAAGTGTGTGTaGTGGTGCAATGGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: GLLVAFPTMSKVSGMSSQLLKCV*WCNGQD
Trigger: GTCCTGGCCATTGCACCATCACACACACTTCAGGAG...CTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR TCA 90 bp ACTCAACACTGCCTCATTCACATTCATAGGCTGGAGTCATCACAGATTCTGGCCAGGACACGTGGAGGCTaGTGGGTGCAGCTAGGCTCG +
Preference number: 4 (lower is better)
Translates to: TQHCLIHIHRLESSQILARTRGG*WVQLGS
Trigger: CGAGCCTAGCTGCACCCATCAGCCTCCACGTGTCCT...GGCCAGAATCTGTGATGACTCCAGCCTATGAATGTGAATGAGGCAGTGTTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR TCA 90 bp TCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAATGTCCTGACATGGCCTGTCCCTaGTGCCAAGCTGTGGACCCC +
Preference number: 4 (lower is better)
Translates to: SGMSSQLGVLWKSNSKCPDMACP*CQAVDP
Trigger: GGGGTCCACAGCTTGGCATCAGGGACAGGCCATGTC...AGGACATTTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp ATTCATAGGCTGGAGTCATCACAGATTCTGGCCACTTTCTCCTCCGGAGGGCAGACCGCCCGATGGTGCTaGTTGAGCCCAGCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: IHRLESSQILATFSSGGQTARWC*LSPASF
Trigger: AAAACTTGCTGGGCTCAATCAGCACCATCGGGCGGT...CTGCCCTCCGGAGGAGAAAGTGGCCAGAATCTGTGATGACTCCAGCCTATGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp TCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGCAGCCAGGAGGCGGCAGCTaGGGTTCAGGGCAGCGCCCT +
Preference number: 4 (lower is better)
Translates to: SSGLKIKTTFPSLPCSLQPGGGS*GSGQRP
Trigger: AGGGCGCTGCCCTGAACCTCAGCTGCCGCCTCCTGG...CTGCAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp TGCAATCCAACCAAAGTCCAGGGTGACTTTCGAGGAGAAGGATGTGAAAGGGCAAGAGCACACGGAGCATaGCTGGAGCAGAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: CNPTKVQGDFRGEGCERARAHGA*LEQRQQ
Trigger: CTGCTGCCTCTGCTCCAGTCATGCTCCGTGTGCTCT...TGCCCTTTCACATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTTGGATTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp TGCATGGCTGGAAGTGTGACTTGGAGCCCTGGCCTACCAGGTGAATCAGCTGCACTTGCAGTAGCCATGTaGCAATACTCCAGCCAATGG +
Preference number: 4 (lower is better)
Translates to: CMAGSVTWSPGLPGESAALAVAM*QYSSQW
Trigger: CCATTGGCTGGAGTATTGTCACATGGCTACTGCAAG...TGCAGCTGATTCACCTGGTAGGCCAGGGCTCCAAGTCACACTTCCAGCCATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR TCA 90 bp ATTCATAGGCTGGAGTCATCACAGATTCTGGCCACTTTCTCCTCCGGAGGGCAGGGGTGGTGGTGGGAATaGGGGCATCTCTTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: IHRLESSQILATFSSGGQGWWWE*GHLFFQ
Trigger: CTGAAAGAAGAGATGCCCTCATTCCCACCACCACCC...CTGCCCTCCGGAGGAGAAAGTGGCCAGAATCTGTGATGACTCCAGCCTATGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp TCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAATGTCCTGGCTCTCCTATCTCCTaGGGGGCTCCTGGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: SGMSSQLGVLWKSNSKCPGSPIS*GAPGSL
Trigger: CAGGGAACCAGGAGCCCCTCAGGAGATAGGAGAGCC...AGGACATTTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR GCA 90 bp AGGAGATCCAGAGAAGAGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCGCGGAGATCACTGGGTaGCTCATTGGGTGTGTTGCA +
Preference number: 4 (lower is better)
Translates to: RRSREERARSAQCSSVSSAEITG*LIGCVA
Trigger: TGCAACACACCCAATGAGGCACCCAGTGATCTCCGC...GGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCTCTTCTCTGGATCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp ACTCAACACTGCCTCATTCACATTCATAGGCTGGAGTCATCACAGATTCTGGCCAACAGCCCCCACAGGTaGTGCAGCCACCCCCTGATG +
Preference number: 4 (lower is better)
Translates to: TQHCLIHIHRLESSQILANSPHR*CSHPLM
Trigger: CATCAGGGGGTGGCTGCAGCACCTGTGGGGGCTGTT...GGCCAGAATCTGTGATGACTCCAGCCTATGAATGTGAATGAGGCAGTGTTGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp TGCAATCCAACCAAAGTCCAGGGTGACTTTCGAGGAGAAGGATGTGAAAGGGCATGGGCATCCAGGCGCTaGTGCCCATCCTGGTACCAT +
Preference number: 4 (lower is better)
Translates to: CNPTKVQGDFRGEGCERAWASRR*CPSWYH
Trigger: ATGGTACCAGGATGGGCAGCAGCGCCTGGATGCCCA...TGCCCTTTCACATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTTGGATTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp AAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAAGTACCAGGGCCAGCTaGCCGCCATGGCTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: KSLRDELTVGSPLEVQFQSTRAS*PPWLSR
Trigger: CCTGGAGAGCCATGGCGGGCAGCTGGCCCTGGTACT...TTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp TCATTCACATTCATAGGCTGGAGTCATCACAGATTCTGGCCACTTTCTCCTCCGGCAGCTGGACCCTCCTaGAGCCAACGACCGTTGTGG +
Preference number: 4 (lower is better)
Translates to: SFTFIGWSHHRFWPLSPPAAGPS*SQRPLW
Trigger: CCACAACGGTCGTTGGCTGCAGGAGGGTCCAGCTGC...CGGAGGAGAAAGTGGCCAGAATCTGTGATGACTCCAGCCTATGAATGTGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp ATTCATAGGCTGGAGTCATCACAGATTCTGGCCACTTTCTCCTCCGGAGGGCAGTCGTGGCCAGCACCTTaGCATCATGAGATAGGGCCA +
Preference number: 4 (lower is better)
Translates to: IHRLESSQILATFSSGGQSWPAP*HHEIGP
Trigger: TGGCCCTATCTCATGATGGCAAGGTGCTGGCCACGA...CTGCCCTCCGGAGGAGAAAGTGGCCAGAATCTGTGATGACTCCAGCCTATGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp GGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCAGGCCACCAGTCGACTaGCAAGGTGGAGAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: GTETKHGLLVAFPTMSKVRPPVD*QGGESG
Trigger: GCCTGACTCTCCACCTTGGCAGTCGACTGGTGGCCT...GACTTTTGACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp GCGTCCACCATGGGCATGGGTGTGCTTCTACCTCCACTCTTCCTTCTTCTGGCTTTCTCGCCCATGCTCTaGTTACAAACACGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: ASTMGMGVLLPPLFLLLAFSPML*LQTRLL
Trigger: AAGGAGGCGTGTTTGTAAGCAGAGCATGGGCGAGAA...AGCCAGAAGAAGGAAGAGTGGAGGTAGAAGCACACCCATGCCCATGGTGGACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp AGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCGGTCTCACATGTGGCTaGATCAGGATCAATGAGCTG +
Preference number: 4 (lower is better)
Translates to: RERDQLSALQCPPGSTPSGLTCG*IRINEL
Trigger: CAGCTCATTGATCCTGATGCAGCCACATGTGAGACC...GGAGGGTGTTGACCCTGGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp CAACATCTGTGTCTGCCCTCCACTCTTGTAAGGGCCAGTAAGGTAGTACCCAGTAAACACGCCTCCTTCTaGAAGGCCCGGAGTGGACTC +
Preference number: 4 (lower is better)
Translates to: QHLCLPSTLVRASKVVPSKHASF*KARSGL
Trigger: GAGTCCACTCCGGGCCTTGCAGAAGGAGGCGTGTTT...ACTGGGTACTACCTTACTGGCCCTTACAAGAGTGGAGGGCAGACACAGATGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CCA 90 bp CTTGGTAACTCATTCTCTTTAACAGCCCGACACAGGGTCTCCAGGAAAAGGACACTCCACAGAAGGAAGTaGCTGCGGCGGTGCTGGACC +
Preference number: 4 (lower is better)
Translates to: LGNSFSLTARHRVSRKRTLHRRK*LRRCWT
Trigger: GGTCCAGCACCGCCGCAGCCACTTCCTTCTGTGGAG...TGTCCTTTTCCTGGAGACCCTGTGTCGGGCTGTTAAAGAGAATGAGTTACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp ACTCAACACTGCCTCATTCACATTCATAGGCTGGAGTCATCACAGATTCTGGCCGGTGGCCGACGCCGGTaGGCTCAAACTTCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: TQHCLIHIHRLESSQILAGGRRR*AQTSGC
Trigger: ACAGCCAGAAGTTTGAGCCCACCGGCGTCGGCCACC...GGCCAGAATCTGTGATGACTCCAGCCTATGAATGTGAATGAGGCAGTGTTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp GGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCTGAGCCCTGTGATTaGCCACGGAGAGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: GTETKHGLLVAFPTMSKVSEPCD*PRRAGS
Trigger: GCTGCCAGCTCTCCGTGGCCAATCACAGGGCTCAGA...GACTTTTGACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp TCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAATGTCCTCAGGATGGGACCTGCTaGGCTCACCTGGACCTCAGC +
Preference number: 4 (lower is better)
Translates to: SGMSSQLGVLWKSNSKCPQDGTC*AHLDLS
Trigger: GCTGAGGTCCAGGTGAGCCCAGCAGGTCCCATCCTG...AGGACATTTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp AGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCACTAGTGTCACTGTCTaGTTCTCCAGGATGGGACCT +
Preference number: 4 (lower is better)
Translates to: RERDQLSALQCPPGSTPSTSVTV*FSRMGP
Trigger: AGGTCCCATCCTGGAGAACCAGACAGTGACACTAGT...GGAGGGTGTTGACCCTGGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp TGCTGCAATCCAACCAAAGTCCAGGGTGACTTTCGAGGAGAAGGATGTGAAAGGCACAGTGAGAACAGCTaGCGAAGAGGGGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: CCNPTKVQGDFRGEGCERHSENS*RRGATG
Trigger: GCCAGTGGCCCCTCTTCGCCAGCTGTTCTCACTGTG...CCTTTCACATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTTGGATTGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp CTTGGTAACTCATTCTCTTTAACAGCCCGACACAGGGTCTCCAGGAAAAGGACAACGGGAGTGGAGAGCTaGGCACCAGCCTCAGTCAGG +
Preference number: 4 (lower is better)
Translates to: LGNSFSLTARHRVSRKRTTGVES*APASVR
Trigger: CCTGACTGAGGCTGGTGCCCAGCTCTCCACTCCCGT...TGTCCTTTTCCTGGAGACCCTGTGTCGGGCTGTTAAAGAGAATGAGTTACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp AGTAGATGGGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTAGAGCCATGTGGCCCTaGCCCATGTCTAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: SRWALRQNMACWWHSQQCRAMWP*PMSRRA
Trigger: AGCCCTCCTAGACATGGGCCAGGGCCACATGGCTCT...ACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp CAGCCAATGGGAAGTGAGTGGAAAAGTCCTGTGCAGCTTCTGAGTTGCGTCCACATGAACAGAGCCATGTaGCCCTGGCCCATGTCTAGG +
Preference number: 4 (lower is better)
Translates to: QPMGSEWKSPVQLLSCVHMNRAM*PWPMSR
Trigger: CCTAGACATGGGCCAGGGCCACATGGCTCTGTTCAT...GTGGACGCAACTCAGAAGCTGCACAGGACTTTTCCACTCACTTCCCATTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp GCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTGGTGATGGTGACACCTaGACCCAGGCTCCTCGGACC +
Preference number: 4 (lower is better)
Translates to: AFPTMSKVSGMSSQLGVLGDGDT*TQAPRT
Trigger: GGTCCGAGGAGCCTGGGTCCAGGTGTCACCATCACC...AAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp ATCTGGAGCAGGAATAAGGATGCTGACAACATCTGTGTCTGCCCTCCACTCTTGGACTCCTGGAGGGGCTaGCCATCCCGATACCAACGA +
Preference number: 4 (lower is better)
Translates to: IWSRNKDADNICVCPPLLDSWRG*PSRYQR
Trigger: TCGTTGGTATCGGGATGGCCAGCCCCTCCAGGAGTC...CAAGAGTGGAGGGCAGACACAGATGTTGTCAGCATCCTTATTCCTGCTCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp ATCTGGAGCAGGAATAAGGATGCTGACAACATCTGTGTCTGCCCTCCACTCTTGCCACACCTTGTAGGGTaGAGGCCACAAGGCGATCCC +
Preference number: 4 (lower is better)
Translates to: IWSRNKDADNICVCPPLLPHLVG*RPQGDP
Trigger: GGGATCGCCTTGTGGCCTCCACCCTACAAGGTGTGG...CAAGAGTGGAGGGCAGACACAGATGTTGTCAGCATCCTTATTCCTGCTCCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp GCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTGCTGGGCCGGGTGAGTaGTCCACACAAGGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: AFPTMSKVSGMSSQLGVLAGPGE*STQGRS
Trigger: TGACCTGCCTTGTGTGGACCACTCACCCGGCCCAGC...AAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp AGGAGATCCAGAGAAGAGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCACCAAGTATAGAGTGTaGGTGCGTGGGCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: RRSREERARSAQCSSVSSTKYRV*VRGQQG
Trigger: ACCCTGCTGCCCACGCACCCACACTCTATACTTGGT...GGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCTCTTCTCTGGATCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp CTTCTTGGTAACTCATTCTCTTTAACAGCCCGACACAGGGTCTCCAGGAAAAGGCACACGGAGCATGACTaGAGCAGAGGCAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LLGNSFSLTARHRVSRKRHTEHD*SRGSSP
Trigger: GGGGCTGCTGCCTCTGCTCCAGTCATGCTCCGTGTG...CCTTTTCCTGGAGACCCTGTGTCGGGCTGTTAAAGAGAATGAGTTACCAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp CAGCCAATGGGAAGTGAGTGGAAAAGTCCTGTGCAGCTTCTGAGTTGCGTCCACCGAAGACCATCATGGTaGGCGTCTTGGGAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: QPMGSEWKSPVQLLSCVHRRPSW*ASWEGR
Trigger: TCTACCCTCCCAAGACGCCCACCATGATGGTCTTCG...GTGGACGCAACTCAGAAGCTGCACAGGACTTTTCCACTCACTTCCCATTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp GGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCATTCCCCTTGGTCGCTaGGCCTCAGCGCCTCGATGT +
Preference number: 4 (lower is better)
Translates to: GTETKHGLLVAFPTMSKVIPLGR*ASAPRC
Trigger: ACATCGAGGCGCTGAGGCCCAGCGACCAAGGGGAAT...GACTTTTGACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp GATCCAGAGAAGAGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGCACTCTTCCTTCTTCTaGCTGGAGGGCATGTGGACA +
Preference number: 4 (lower is better)
Translates to: DPEKRERDQLSALQCPPGHSSFF*LEGMWT
Trigger: TGTCCACATGCCCTCCAGCCAGAAGAAGGAAGAGTG...CCCTGGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCTCTTCTCTGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp GAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCTGGGCAGAACATGGCCTGCTGGTaGCATTCCCAACAATGTCAA +
Preference number: 4 (lower is better)
Translates to: EISSVLFSVLQGQHPPGQNMACW*HSQQCQ
Trigger: TTGACATTGTTGGGAATGCCACCAGCAGGCCATGTT...CTGCCCAGGAGGGTGTTGACCCTGGAGGACACTGAAGAGCACTGAGCTGATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp AGGAGATCCAGAGAAGAGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCATTGGGAGGACATTCTaGACGGGCTCCCAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: RRSREERARSAQCSSVSSIGRTF*TGSQQE
Trigger: CTCTTGCTGGGAGCCCGTCCAGAATGTCCTCCCAAT...GGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCTCTTCTCTGGATCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp CCAGATGCCAGTTGGCACTGTGGGTTAGCTGGGTATTATATCTGCCCGTGTGTGCAGACCACAAGAGCGTaGGAACCTCATGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: PDASWHCGLAGYYICPCVQTTRA*EPHGEW
Trigger: CCACTCTCCATGAGGTTCCCACGCTCTTGTGGTCTG...CACACACGGGCAGATATAATACCCAGCTAACCCACAGTGCCAACTGGCATCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR TCA 90 bp TGCTGCAATCCAACCAAAGTCCAGGGTGACTTTCGAGGAGAAGGATGTGAAAGGCCCGATGGTGCTGATTaGGCCCAGCAAGTTTTGGGC +
Preference number: 4 (lower is better)
Translates to: CCNPTKVQGDFRGEGCERPDGAD*AQQVLG
Trigger: GCCCAAAACTTGCTGGGCTCAATCAGCACCATCGGG...CCTTTCACATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTTGGATTGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp AAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAAAGCAGCTGCTGGAACTaGTGCAGGCGGTGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: KVSGMSSQLGVLWKSNSKSSCWN*CRRCRA
Trigger: AGCCCTGCACCGCCTGCATCAGTTCCAGCAGCTGCT...TTTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp AGGAGATCCAGAGAAGAGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCCCAGCCAATGGGAAGTaGGTGGAAAAGTCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: RRSREERARSAQCSSVSSPANGK*VEKSCA
Trigger: TGCACAGGACTTTTCCACTCACTTCCCATTGGCTGG...GGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCTCTTCTCTGGATCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp GCGTCCACCATGGGCATGGGTGTGCTTCTACCTCCACTCTTCCTTCTTCTGGCTCTTTTGCTTTATCGCTaGAGCTCTCCACACAAGGGT +
Preference number: 4 (lower is better)
Translates to: ASTMGMGVLLPPLFLLLALLLYR*SSPHKG
Trigger: ACCCTTGTGTGGAGAGCTTCAGCGATAAAGCAAAAG...AGCCAGAAGAAGGAAGAGTGGAGGTAGAAGCACACCCATGCCCATGGTGGACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR TCA 90 bp CAACATCTGTGTCTGCCCTCCACTCTTGTAAGGGCCAGTAAGGTAGTACCCAGTTCTGCCCGTGTGTGTTaGATGGATACCTGCGTGGTC +
Preference number: 4 (lower is better)
Translates to: QHLCLPSTLVRASKVVPSSARVC*MDTCVV
Trigger: GACCACGCAGGTATCCATTCAACACACACGGGCAGA...ACTGGGTACTACCTTACTGGCCCTTACAAGAGTGGAGGGCAGACACAGATGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR TCA 90 bp GGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGGCACCATCCTCTAAATaGCAGCAGTCTCCAGATGCC +
Preference number: 4 (lower is better)
Translates to: GLLVAFPTMSKVSGMSSQAPSSK*QQSPDA
Trigger: GGCATCTGGAGACTGCTGTCATTTAGAGGATGGTGC...CTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR TCA 90 bp TCATTCACATTCATAGGCTGGAGTCATCACAGATTCTGGCCACTTTCTCCTCCGCCCTGGCCTACCAGGTaGATCAGCTGCAGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: SFTFIGWSHHRFWPLSPPPWPTR*ISCRRD
Trigger: GTCCCTTCTGCAGCTGATTCACCTGGTAGGCCAGGG...CGGAGGAGAAAGTGGCCAGAATCTGTGATGACTCCAGCCTATGAATGTGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR GCA 90 bp CAGCCAATGGGAAGTGAGTGGAAAAGTCCTGTGCAGCTTCTGAGTTGCGTCCACTTTAGCCCCAGCACCTaGTGCTCCACAGAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: QPMGSEWKSPVQLLSCVHFSPST*CSTEGS
Trigger: ACTTCCTTCTGTGGAGCAGCAGGTGCTGGGGCTAAA...GTGGACGCAACTCAGAAGCTGCACAGGACTTTTCCACTCACTTCCCATTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp CTTCTTGGTAACTCATTCTCTTTAACAGCCCGACACAGGGTCTCCAGGAAAAGGCCTTCAGCAGCAGGTTaGACACCCTGTGCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: LLGNSFSLTARHRVSRKRPSAAG*TPCARG
Trigger: ACCCCGAGCACAGGGTGTGCAACCTGCTGCTGAAGG...CCTTTTCCTGGAGACCCTGTGTCGGGCTGTTAAAGAGAATGAGTTACCAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp AGTAGATGGGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCGTTGCCCAGGGCATTaGTGGCCTCACAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: SRWALRQNMACWWHSQQCRCPGH*WPHRGT
Trigger: TGTACCTCTGTGAGGCCAGCAATGCCCTGGGCAACG...ACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp ATTCATAGGCTGGAGTCATCACAGATTCTGGCCACTTTCTCCTCCGGAGGGCAGCTTCCCGGCTCACGTTaGAAGTCAAGTTGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: IHRLESSQILATFSSGGQLPGSR*KSSWLL
Trigger: CAGAAGCCAACTTGACTTGCAACGTGAGCCGGGAAG...CTGCCCTCCGGAGGAGAAAGTGGCCAGAATCTGTGATGACTCCAGCCTATGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp GCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTGCATCCAGGCGCTGCTaGCCATCCTGGTACCATGTG +
Preference number: 4 (lower is better)
Translates to: AFPTMSKVSGMSSQLGVLASRRC*PSWYHV
Trigger: CACATGGTACCAGGATGGGCAGCAGCGCCTGGATGC...AAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp ACTCAACACTGCCTCATTCACATTCATAGGCTGGAGTCATCACAGATTCTGGCCAGTATAGAGTGTGGGTaGGTGGGCAGCAGGGTCCGC +
Preference number: 4 (lower is better)
Translates to: TQHCLIHIHRLESSQILASIECG*VGSRVR
Trigger: GCGGACCCTGCTGCCCACGCACCCACACTCTATACT...GGCCAGAATCTGTGATGACTCCAGCCTATGAATGTGAATGAGGCAGTGTTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp GCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTGGCACATCTTGCACCTaGAGCCGTAGGGCGTTTCGG +
Preference number: 4 (lower is better)
Translates to: AFPTMSKVSGMSSQLGVLGTSCT*SRRAFR
Trigger: CCGAAACGCCCTACGGCTGCAGGTGCAAGATGTGCC...AAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp TCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAATGTCCTCGTGCACCTTCTACCTaGAACCGCCCGATGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SGMSSQLGVLWKSNSKCPRAPST*NRPMVL
Trigger: CAGCACCATCGGGCGGTTGCAGGTAGAAGGTGCACG...AGGACATTTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp CCAGATGCCAGTTGGCACTGTGGGTTAGCTGGGTATTATATCTGCCCGTGTGTGCCGAATTCTCGCCCATaGTCTGCTTACAAACACGCC +
Preference number: 4 (lower is better)
Translates to: PDASWHCGLAGYYICPCVPNSRP*SAYKHA
Trigger: GGCGTGTTTGTAAGCAGAGCATGGGCGAGAATTCGG...CACACACGGGCAGATATAATACCCAGCTAACCCACAGTGCCAACTGGCATCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR GCA 90 bp GCGTCCACCATGGGCATGGGTGTGCTTCTACCTCCACTCTTCCTTCTTCTGGCTTCTGAGGATGCAGGATaGTGCAATCCAACCAAAGTC +
Preference number: 4 (lower is better)
Translates to: ASTMGMGVLLPPLFLLLASEDAG*CNPTKV
Trigger: GACTTTGGTTGGATTGCAGCATCCTGCATCCTCAGA...AGCCAGAAGAAGGAAGAGTGGAGGTAGAAGCACACCCATGCCCATGGTGGACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp AGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCTCTGAGGATGCAGGATaGTGCAATCCAACCAAAGTC +
Preference number: 4 (lower is better)
Translates to: RERDQLSALQCPPGSTPSSEDAG*CNPTKV
Trigger: GACTTTGGTTGGATTGCAGCATCCTGCATCCTCAGA...GGAGGGTGTTGACCCTGGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp AAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAACAGAGCAGCCACAGCTaGAGGCCCCCAGTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: KVSGMSSQLGVLWKSNSKQSSHS*RPPVLP
Trigger: AGGAAGCACTGGGGGCCTGCAGCTGTGGCTGCTCTG...TTTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR GCA 90 bp GAGGTCTCACATGTGGCTGCATCAGGATCAATGAGCTTCCCACAGAGAAAACCCGAAGACGAGGTGGGCTaGCTTACCCCAATCTTCTGG +
Preference number: 4 (lower is better)
Translates to: EVSHVAASGSMSFPQRKPEDEVG*LTPIFW
Trigger: CCAGAAGATTGGGGTAAGGCAGCCCACCTCGTCTTC...GGGTTTTCTCTGTGGGAAGCTCATTGATCCTGATGCAGCCACATGTGAGACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR GCA 90 bp GATCCAGAGAAGAGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGAAATGGAGGGGATGCTaGCAAGTCCAGAAAGTCTCC +
Preference number: 4 (lower is better)
Translates to: DPEKRERDQLSALQCPPGKWRGC*QVQKVS
Trigger: GGAGACTTTCTGGACTTGGCAGCATCCCCTCCATTT...CCCTGGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCTCTTCTCTGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CCA 90 bp GATCCAGAGAAGAGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGGTGGGCTCAAACTTCTaGCTGTTGAAGGTGACAGAG +
Preference number: 4 (lower is better)
Translates to: DPEKRERDQLSALQCPPGVGSNF*LLKVTE
Trigger: CTCTGTCACCTTCAACAGCCAGAAGTTTGAGCCCAC...CCCTGGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCTCTTCTCTGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp GACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATGGTCCTGCCAGGACATaGCCATGTGGAGGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: DKTWPAGGIPNNVKSLRDGPART*PCGGSP
Trigger: TGGAGACCCTCCACATGGCCATGTCCTGGCAGGACC...ATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp CTTGGTAACTCATTCTCTTTAACAGCCCGACACAGGGTCTCCAGGAAAAGGACAGAGCGCTCGCTGCCATaGACGTTCTGCACCTCACAG +
Preference number: 4 (lower is better)
Translates to: LGNSFSLTARHRVSRKRTERSLP*TFCTSQ
Trigger: CTGTGAGGTGCAGAACGTCCATGGCAGCGAGCGCTC...TGTCCTTTTCCTGGAGACCCTGTGTCGGGCTGTTAAAGAGAATGAGTTACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp ATCTGGAGCAGGAATAAGGATGCTGACAACATCTGTGTCTGCCCTCCACTCTTGGAAGGCTGTCAGGACTaGAGTGAGAGGCGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: IWSRNKDADNICVCPPLLEGCQD*SERRVV
Trigger: AACCACCCGCCTCTCACTCCAGTCCTGACAGCCTTC...CAAGAGTGGAGGGCAGACACAGATGTTGTCAGCATCCTTATTCCTGCTCCAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp TCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAATGTCCTGCCAGGACAGTGGCCTaGCCATTGAAGGTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: SGMSSQLGVLWKSNSKCPARTVA*PLKVAE
Trigger: CTCAGCCACCTTCAATGGCCAGGCCACTGTCCTGGC...AGGACATTTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp TCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAATGTCCTCCAGACGCAGTGTGTTaGGGGCCACAGCCACATGCA +
Preference number: 4 (lower is better)
Translates to: SGMSSQLGVLWKSNSKCPPDAVC*GPQPHA
Trigger: TGCATGTGGCTGTGGCCCCCAACACACTGCGTCTGG...AGGACATTTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp TCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGCAGAGGGACGTGTTGGCCTaGCCCAGAGGGCTGCGGGCA +
Preference number: 4 (lower is better)
Translates to: SSGLKIKTTFPSLPCSLQRDVLA*PRGLRA
Trigger: TGCCCGCAGCCCTCTGGGCCAGGCCAACACGTCCCT...CTGCAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp TCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAATGTCCTCTGCATGAGCCCGCGTaGCCACCAGGAATGAGAGTG +
Preference number: 4 (lower is better)
Translates to: SGMSSQLGVLWKSNSKCPLHEPA*PPGMRV
Trigger: CACTCTCATTCCTGGTGGCCACGCGGGCTCATGCAG...AGGACATTTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp GACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATCTGCATGAGCCCGCGTaGCCACCAGGAATGAGAGTG +
Preference number: 4 (lower is better)
Translates to: DKTWPAGGIPNNVKSLRDLHEPA*PPGMRV
Trigger: CACTCTCATTCCTGGTGGCCACGCGGGCTCATGCAG...ATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp TCATTCACATTCATAGGCTGGAGTCATCACAGATTCTGGCCACTTTCTCCTCCGCCATGGATCTGGCCCTaGAGTCCCGGAAGGAGGACA +
Preference number: 4 (lower is better)
Translates to: SFTFIGWSHHRFWPLSPPPWIWP*SPGRRT
Trigger: TGTCCTCCTTCCGGGACTCCAGGGCCAGATCCATGG...CGGAGGAGAAAGTGGCCAGAATCTGTGATGACTCCAGCCTATGAATGTGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp TCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAATGTCCTGCGTTTCGGGCCACCTaGACATGGCCTGTCCCTGAT +
Preference number: 4 (lower is better)
Translates to: SGMSSQLGVLWKSNSKCPAFRAT*TWPVPD
Trigger: ATCAGGGACAGGCCATGTCCAGGTGGCCCGAAACGC...AGGACATTTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp AAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAACACACGGAGCATGACTaGAGCAGAGGCAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: KSLRDELTVGSPLEVQFQHTEHD*SRGSSP
Trigger: GGGGCTGCTGCCTCTGCTCCAGTCATGCTCCGTGTG...TTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp ACTCAACACTGCCTCATTCACATTCATAGGCTGGAGTCATCACAGATTCTGGCCAGTCGACTGCCAAGGTaGAGAGTCAGGCTGGCGAGC +
Preference number: 4 (lower is better)
Translates to: TQHCLIHIHRLESSQILASRLPR*RVRLAS
Trigger: GCTCGCCAGCCTGACTCTCCACCTTGGCAGTCGACT...GGCCAGAATCTGTGATGACTCCAGCCTATGAATGTGAATGAGGCAGTGTTGAGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp AGTAGATGGGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCAGGACATGGATGTGTaGCTCTGCAGGAGCACCCTG +
Preference number: 4 (lower is better)
Translates to: SRWALRQNMACWWHSQQCQDMDV*LCRSTL
Trigger: CAGGGTGCTCCTGCAGAGCCACACATCCATGTCCTG...ACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp GCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTATTCCCCTTGGTCGCTaGGCCTCAGCGCCTCGATGT +
Preference number: 4 (lower is better)
Translates to: AFPTMSKVSGMSSQLGVLIPLGR*ASAPRC
Trigger: ACATCGAGGCGCTGAGGCCCAGCGACCAAGGGGAAT...AAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp GACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATCAGATGTATTCCCCTTaGTCGCTGGGCCTCAGCGCC +
Preference number: 4 (lower is better)
Translates to: DKTWPAGGIPNNVKSLRDQMYSP*SLGLSA
Trigger: GGCGCTGAGGCCCAGCGACCAAGGGGAATACATCTG...ATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp CAGCCAATGGGAAGTGAGTGGAAAAGTCCTGTGCAGCTTCTGAGTTGCGTCCACCACTCTTCCTTCTTCTaGCTGGAGGGCATGTGGACA +
Preference number: 4 (lower is better)
Translates to: QPMGSEWKSPVQLLSCVHHSSFF*LEGMWT
Trigger: TGTCCACATGCCCTCCAGCCAGAAGAAGGAAGAGTG...GTGGACGCAACTCAGAAGCTGCACAGGACTTTTCCACTCACTTCCCATTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp AAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAAGCCCACAACCAGAATaGCCAGGGGCACACCCTGGC +
Preference number: 4 (lower is better)
Translates to: KSLRDELTVGSPLEVQFQSPQPE*PGAHPG
Trigger: GCCAGGGTGTGCCCCTGGCCATTCTGGTTGTGGGCT...TTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp TCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAATGTCCTCTGACCACAGAGCAGTaGAGGATGCCCACAAGTCCC +
Preference number: 4 (lower is better)
Translates to: SGMSSQLGVLWKSNSKCPLTTEQ*RMPTSP
Trigger: GGGACTTGTGGGCATCCTTCACTGCTCTGTGGTCAG...AGGACATTTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR TCA 90 bp AAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAAGTGGAGGCCAGGATATaGCCCCCATGTGACAGCACC +
Preference number: 4 (lower is better)
Translates to: KVSGMSSQLGVLWKSNSKVEARI*PPCDST
Trigger: GGTGCTGTCACATGGGGGTCATATCCTGGCCTCCAC...TTTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR TCA 90 bp TGCAATCCAACCAAAGTCCAGGGTGACTTTCGAGGAGAAGGATGTGAAAGGGCAAAGGGAGTTGGTGGCTaGGCACTTGTACTCCCCACT +
Preference number: 4 (lower is better)
Translates to: CNPTKVQGDFRGEGCERAKGVGG*ALVLPT
Trigger: AGTGGGGAGTACAAGTGCTCAGCCACCAACTCCCTT...TGCCCTTTCACATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTTGGATTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR TCA 90 bp AAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAATGGTACATCCCAGCTTaGGCACGAGCCACGTGGGTG +
Preference number: 4 (lower is better)
Translates to: KVSGMSSQLGVLWKSNSKWYIPA*ARATWV
Trigger: CACCCACGTGGCTCGTGCTCAAGCTGGGATGTACCA...TTTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp GGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGAACCAAAGTCCAGGGTaGCTTTCGAGGAGAAGGATG +
Preference number: 4 (lower is better)
Translates to: GLLVAFPTMSKVSGMSSQNQSPG*LSRRRM
Trigger: CATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTT...CTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp ATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGGAGGGTGGTGCGCACTaGGCTGGCTGGGCTCACAGG +
Preference number: 4 (lower is better)
Translates to: MSSGLKIKTTFPSLPCSLEGGAH*AGWAHR
Trigger: CCTGTGAGCCCAGCCAGCGCAGTGCGCACCACCCTC...CAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp TCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGCAGAGGTCAGGCGCAGGTTaGGGGGCGCGTAGAGGACGT +
Preference number: 4 (lower is better)
Translates to: SSGLKIKTTFPSLPCSLQRSGAG*GARRGR
Trigger: ACGTCCTCTACGCGCCCCGCAACCTGCGCCTGACCT...CTGCAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp ATTCATAGGCTGGAGTCATCACAGATTCTGGCCACTTTCTCCTCCGGAGGGCAGATAGGTGTCATCACCTaGAGGCACATCTTGCACCTG +
Preference number: 4 (lower is better)
Translates to: IHRLESSQILATFSSGGQIGVIT*RHILHL
Trigger: CAGGTGCAAGATGTGCCTGCAGGTGATGACACCTAT...CTGCCCTCCGGAGGAGAAAGTGGCCAGAATCTGTGATGACTCCAGCCTATGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp AAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAAATGCAAAGGTGGAGTTaGCCACAGGCCCAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: KVSGMSSQLGVLWKSNSKMQRWS*PQAQGH
Trigger: GTGGCCCTGGGCCTGTGGGCAACTCCACCTTTGCAT...TTTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp CAGCCAATGGGAAGTGAGTGGAAAAGTCCTGTGCAGCTTCTGAGTTGCGTCCACGAGGATGCAGGATGCTaGAATCCAACCAAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: QPMGSEWKSPVQLLSCVHEDAGC*NPTKVQ
Trigger: CTGGACTTTGGTTGGATTGCAGCATCCTGCATCCTC...GTGGACGCAACTCAGAAGCTGCACAGGACTTTTCCACTCACTTCCCATTGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp TGCAATCCAACCAAAGTCCAGGGTGACTTTCGAGGAGAAGGATGTGAAAGGGCACCATGGGCATGGGTGTaGTTCTACCTCCACTCTTCC +
Preference number: 4 (lower is better)
Translates to: CNPTKVQGDFRGEGCERAPWAWV*FYLHSS
Trigger: GGAAGAGTGGAGGTAGAAGCACACCCATGCCCATGG...TGCCCTTTCACATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTTGGATTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp ATCTGGAGCAGGAATAAGGATGCTGACAACATCTGTGTCTGCCCTCCACTCTTGCCATGGGCATGGGTGTaGTTCTACCTCCACTCTTCC +
Preference number: 4 (lower is better)
Translates to: IWSRNKDADNICVCPPLLPWAWV*FYLHSS
Trigger: GGAAGAGTGGAGGTAGAAGCACACCCATGCCCATGG...CAAGAGTGGAGGGCAGACACAGATGTTGTCAGCATCCTTATTCCTGCTCCAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp GACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATGTGCAGCTTCTGAGTTaGGTCCACCATGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: DKTWPAGGIPNNVKSLRDVQLLS*VHHGHG
Trigger: CCCATGCCCATGGTGGACGCAACTCAGAAGCTGCAC...ATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp AGTAGATGGGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCTTAGGCAACTCCACTaGCTGGCATGCTCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: SRWALRQNMACWWHSQQCLRQLH*LACSLP
Trigger: AGGGAGAGAGCATGCCAGGCAGTGGAGTTGCCTAAG...ACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp GAGGTCTCACATGTGGCTGCATCAGGATCAATGAGCTTCCCACAGAGAAAACCCTGGCACAAGGATGTCTaGTTAGGCAACTCCACTGCC +
Preference number: 4 (lower is better)
Translates to: EVSHVAASGSMSFPQRKPWHKDV*LGNSTA
Trigger: GGCAGTGGAGTTGCCTAAGCAGACATCCTTGTGCCA...GGGTTTTCTCTGTGGGAAGCTCATTGATCCTGATGCAGCCACATGTGAGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CCA 90 bp TGCAATCCAACCAAAGTCCAGGGTGACTTTCGAGGAGAAGGATGTGAAAGGGCAGCAGCACACCAGTCTTaGTTTGGAGGCGTACCCCAT +
Preference number: 4 (lower is better)
Translates to: CNPTKVQGDFRGEGCERAAAHQS*FGGVPH
Trigger: ATGGGGTACGCCTCCAAACCAAGACTGGTGTGCTGC...TGCCCTTTCACATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTTGGATTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp GCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTCCTGCTGGGCTCACCTaGACCTCAGCCATGAAGATG +
Preference number: 4 (lower is better)
Translates to: AFPTMSKVSGMSSQLGVLPAGLT*TSAMKM
Trigger: CATCTTCATGGCTGAGGTCCAGGTGAGCCCAGCAGG...AAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp GACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATTCTGGTTCTCCAGGATaGGACCTGCTGGGCTCACCT +
Preference number: 4 (lower is better)
Translates to: DKTWPAGGIPNNVKSLRDSGSPG*DLLGSP
Trigger: AGGTGAGCCCAGCAGGTCCCATCCTGGAGAACCAGA...ATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp ATTCCAAATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGAAGAGGCGACCGGCGTaGCTGAGGGCCAGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: IPNVLWTQNKNYISQSPLKRRPA*LRASWA
Trigger: CGCCCAGCTGGCCCTCAGCCACGCCGGTCGCCTCTT...CAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACATTTGGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp TGCAATCCAACCAAAGTCCAGGGTGACTTTCGAGGAGAAGGATGTGAAAGGGCAACCAAGTATAGAGTGTaGGTGCGTGGGCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: CNPTKVQGDFRGEGCERATKYRV*VRGQQG
Trigger: ACCCTGCTGCCCACGCACCCACACTCTATACTTGGT...TGCCCTTTCACATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTTGGATTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp TGCTGCAATCCAACCAAAGTCCAGGGTGACTTTCGAGGAGAAGGATGTGAAAGGACTGTATCACAGCCATaGATCTGGCCCTGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: CCNPTKVQGDFRGEGCERTVSQP*IWPWSP
Trigger: GGGACTCCAGGGCCAGATCCATGGCTGTGATACAGT...CCTTTCACATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTTGGATTGCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp TGCAATCCAACCAAAGTCCAGGGTGACTTTCGAGGAGAAGGATGTGAAAGGGCACGAAGACCATCATGGTaGGCGTCTTGGGAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: CNPTKVQGDFRGEGCERARRPSW*ASWEGR
Trigger: TCTACCCTCCCAAGACGCCCACCATGATGGTCTTCG...TGCCCTTTCACATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTTGGATTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp ACTCAACACTGCCTCATTCACATTCATAGGCTGGAGTCATCACAGATTCTGGCCCCACGAAGACCATCATaGTGGGCGTCTTGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: TQHCLIHIHRLESSQILAPRRPS*WASWEG
Trigger: ACCCTCCCAAGACGCCCACCATGATGGTCTTCGTGG...GGCCAGAATCTGTGATGACTCCAGCCTATGAATGTGAATGAGGCAGTGTTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp GACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATAGAGCTCTCTCCTGTTaGTCCCTGATTCGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: DKTWPAGGIPNNVKSLRDRALSC*SLIRRG
Trigger: GCCCCTGCGAATCAGGGACCAACAGGAGAGAGCTCT...ATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp AAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAAGGACCTGGGGGAATTTaGGGAGAAGACGAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: KVSGMSSQLGVLWKSNSKGPGGI*GEDEVG
Trigger: GCCCACCTCGTCTTCTCCCCAAATTCCCCCAGGTCC...TTTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CCA 90 bp CACACAAGGGTGCCCCGAGCAATCAGTTTAGAGTCGACAGGCAAATCATGCTGCGCACTGTGGGTTAGCTaGGTATTATATCTGCCCGTG +
Preference number: 4 (lower is better)
Translates to: HTRVPRAISLESTGKSCCALWVS*VLYLPV
Trigger: CACGGGCAGATATAATACCCAGCTAACCCACAGTGC...GCAGCATGATTTGCCTGTCGACTCTAAACTGATTGCTCGGGGCACCCTTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR TCA 90 bp TCATTCACATTCATAGGCTGGAGTCATCACAGATTCTGGCCACTTTCTCCTCCGGCTTCTGTGCCCTCCTaGAGTGTGTGTGATGGTGCA +
Preference number: 4 (lower is better)
Translates to: SFTFIGWSHHRFWPLSPPASVPS*SVCDGA
Trigger: TGCACCATCACACACACTTCAGGAGGGCACAGAAGC...CGGAGGAGAAAGTGGCCAGAATCTGTGATGACTCCAGCCTATGAATGTGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR TCA 90 bp CTTCTTGGTAACTCATTCTCTTTAACAGCCCGACACAGGGTCTCCAGGAAAAGGAGCACCTTGCCATCATaGGATAGGGCCAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: LLGNSFSLTARHRVSRKRSTLPS*DRASSA
Trigger: TGCTGAGCTGGCCCTATCTCATGATGGCAAGGTGCT...CCTTTTCCTGGAGACCCTGTGTCGGGCTGTTAAAGAGAATGAGTTACCAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp CTGGCCCTCAGTAGATGGGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCTTAGAGCAGGCTGACTaGTACTCTGTTGAATACAGA +
Preference number: 4 (lower is better)
Translates to: LALSRWALRQNMACWWHSLEQAD*YSVEYR
Trigger: TCTGTATTCAACAGAGTATCAGTCAGCCTGCTCTAA...GGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACTGAGGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp ACTCAACACTGCCTCATTCACATTCATAGGCTGGAGTCATCACAGATTCTGGCCGGGTGGTGGTGGGAATaGGGGCATCTCTTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: TQHCLIHIHRLESSQILAGWWWE*GHLFFQ
Trigger: CTGAAAGAAGAGATGCCCTCATTCCCACCACCACCC...GGCCAGAATCTGTGATGACTCCAGCCTATGAATGTGAATGAGGCAGTGTTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp AAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAAAGGTTGCACACCCTGTaGTCGGGGTTCCCCATGAAC +
Preference number: 4 (lower is better)
Translates to: KVSGMSSQLGVLWKSNSKRLHTL*SGFPMN
Trigger: GTTCATGGGGAACCCCGAGCACAGGGTGTGCAACCT...TTTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp TGCAATCCAACCAAAGTCCAGGGTGACTTTCGAGGAGAAGGATGTGAAAGGGCATGTCAAAGTTATGGCTaGAAAGCGGAGCGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: CNPTKVQGDFRGEGCERACQSYG*KAERGR
Trigger: TCGGCCACGCTCCGCTTTGCAGCCATAACTTTGACA...TGCCCTTTCACATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTTGGATTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp CTTCTTGGTAACTCATTCTCTTTAACAGCCCGACACAGGGTCTCCAGGAAAAGGTCGTGGCCAGCACCTTaGCATCATGAGATAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LLGNSFSLTARHRVSRKRSWPAP*HHEIGP
Trigger: TGGCCCTATCTCATGATGGCAAGGTGCTGGCCACGA...CCTTTTCCTGGAGACCCTGTGTCGGGCTGTTAAAGAGAATGAGTTACCAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp AAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAGTGCAGCTTCTGAGTTaGGTCCACCATGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: KSLRDELTVGSPLEVQFQVQLLS*VHHGHG
Trigger: CCCATGCCCATGGTGGACGCAACTCAGAAGCTGCAC...TTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp AGTAGATGGGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTACAGGCAAATCATGCTaGAGCAGGAGGGATACAGGG +
Preference number: 4 (lower is better)
Translates to: SRWALRQNMACWWHSQQCTGKSC*SRRDTG
Trigger: CCCTGTATCCCTCCTGCTGCAGCATGATTTGCCTGT...ACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR GCA 90 bp GGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCACAGCAGTCTCCAGATaGCAGTTGGCACTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: GTETKHGLLVAFPTMSKVTAVSR*QLALWV
Trigger: AACCCACAGTGCCAACTGGCATCTGGAGACTGCTGT...GACTTTTGACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR GCA 90 bp CTTGGTAACTCATTCTCTTTAACAGCCCGACACAGGGTCTCCAGGAAAAGGACAACTGACTTTCACTTCTaGCCAGGTGACGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: LGNSFSLTARHRVSRKRTTDFHF*PGDGQA
Trigger: AGCCTGCCCGTCACCTGGGCAGAAGTGAAAGTCAGT...TGTCCTTTTCCTGGAGACCCTGTGTCGGGCTGTTAAAGAGAATGAGTTACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR GCA 90 bp TGCAATCCAACCAAAGTCCAGGGTGACTTTCGAGGAGAAGGATGTGAAAGGGCAGGATTGGTGGGAGTGTaGATGGCTGGAAGTGTGACT +
Preference number: 4 (lower is better)
Translates to: CNPTKVQGDFRGEGCERAGLVGV*MAGSVT
Trigger: AGTCACACTTCCAGCCATGCACACTCCCACCAATCC...TGCCCTTTCACATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTTGGATTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR GCA 90 bp GGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGGGTCTCACATGTGGCTaGATCAGGATCAATGAGCTT +
Preference number: 4 (lower is better)
Translates to: GLLVAFPTMSKVSGMSSQGLTCG*IRINEL
Trigger: AAGCTCATTGATCCTGATGCAGCCACATGTGAGACC...CTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CCA 90 bp AGTAGATGGGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCACTGGGTGCCTCATTaGGTGTGTTGCAGACTAGTG +
Preference number: 4 (lower is better)
Translates to: SRWALRQNMACWWHSQQCHWVPH*VCCRLV
Trigger: CACTAGTCTGCAACACACCCAATGAGGCACCCAGTG...ACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp GCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTCAGGCTCCTCGGACCTaGAAGAAGAGTGAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: AFPTMSKVSGMSSQLGVLQAPRT*KKSEVL
Trigger: CAACACCTCACTCTTCTTCCAGGTCCGAGGAGCCTG...AAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp AAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAATCATGGTGGGCGTCTTaGGAGGGTAGAGCACACGGA +
Preference number: 4 (lower is better)
Translates to: KVSGMSSQLGVLWKSNSKSWWAS*EGRAHG
Trigger: TCCGTGTGCTCTACCCTCCCAAGACGCCCACCATGA...TTTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp AAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAACAGGACATGGATGTGTaGCTCTGCAGGAGCACCCTG +
Preference number: 4 (lower is better)
Translates to: KSLRDELTVGSPLEVQFQQDMDV*LCRSTL
Trigger: CAGGGTGCTCCTGCAGAGCCACACATCCATGTCCTG...TTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp TGCATGGCTGGAAGTGTGACTTGGAGCCCTGGCCTACCAGGTGAATCAGCTGCATTCACATTCATAGGCTaGAGTCATCACAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: CMAGSVTWSPGLPGESAAFTFIG*SHHRFW
Trigger: CCAGAATCTGTGATGACTCCAGCCTATGAATGTGAA...TGCAGCTGATTCACCTGGTAGGCCAGGGCTCCAAGTCACACTTCCAGCCATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CCA 90 bp TCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGCAGGGGTCAACACCCTCCTaGGCAGACCTCTCACCACCC +
Preference number: 4 (lower is better)
Translates to: SSGLKIKTTFPSLPCSLQGSTPS*ADLSPP
Trigger: GGGTGGTGAGAGGTCTGCCCAGGAGGGTGTTGACCC...CTGCAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp CACTCAAGAGCTCTCTCCTGTTGGTCCCTGATTCGCAGGGGCACGTCATTCCTTGAACAGAGATGCATCTaGAGCAGGAATAAGGATGCT +
Preference number: 4 (lower is better)
Translates to: HSRALSCWSLIRRGTSFLEQRCI*SRNKDA
Trigger: AGCATCCTTATTCCTGCTCCAGATGCATCTCTGTTC...AAGGAATGACGTGCCCCTGCGAATCAGGGACCAACAGGAGAGAGCTCTTGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp ACTCAACACTGCCTCATTCACATTCATAGGCTGGAGTCATCACAGATTCTGGCCAGCGTGGGAACCTCATaGAGAGTGGGTGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: TQHCLIHIHRLESSQILASVGTS*RVGASS
Trigger: AGAGGAAGCACCCACTCTCCATGAGGTTCCCACGCT...GGCCAGAATCTGTGATGACTCCAGCCTATGAATGTGAATGAGGCAGTGTTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR TCA 90 bp AAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAGGTGCCTTTCACATCTaGCCAGCGGTTGACCTCACT +
Preference number: 4 (lower is better)
Translates to: KSLRDELTVGSPLEVQFQGAFHI*PAVDLT
Trigger: AGTGAGGTCAACCGCTGGTCAGATGTGAAAGGCACC...TTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR TCA 90 bp ATCTGGAGCAGGAATAAGGATGCTGACAACATCTGTGTCTGCCCTCCACTCTTGGCTCCTCTGTTACTGTaGCCAAGGTGCCTTTCACAT +
Preference number: 4 (lower is better)
Translates to: IWSRNKDADNICVCPPLLAPLLL*PRCLSH
Trigger: ATGTGAAAGGCACCTTGGTCACAGTAACAGAGGAGC...CAAGAGTGGAGGGCAGACACAGATGTTGTCAGCATCCTTATTCCTGCTCCAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR TCA 90 bp CTTCTTGGTAACTCATTCTCTTTAACAGCCCGACACAGGGTCTCCAGGAAAAGGTCCAGCAAAGGGTTGTaGATCTCCACACGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: LLGNSFSLTARHRVSRKRSSKGL*ISTRSK
Trigger: CTTGCTGCGTGTGGAGATTCACAACCCTTTGCTGGA...CCTTTTCCTGGAGACCCTGTGTCGGGCTGTTAAAGAGAATGAGTTACCAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR TCA 90 bp TCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGCAGTGGTACATCCCAGCTTaGGCACGAGCCACGTGGGTG +
Preference number: 4 (lower is better)
Translates to: SSGLKIKTTFPSLPCSLQWYIPA*ARATWV
Trigger: CACCCACGTGGCTCGTGCTCAAGCTGGGATGTACCA...CTGCAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp TGCTGCAATCCAACCAAAGTCCAGGGTGACTTTCGAGGAGAAGGATGTGAAAGGAACCAAAGTCCAGGGTaGCTTTCGAGGAGAAGGATG +
Preference number: 4 (lower is better)
Translates to: CCNPTKVQGDFRGEGCERNQSPG*LSRRRM
Trigger: CATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTT...CCTTTCACATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTTGGATTGCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp TGCAATCCAACCAAAGTCCAGGGTGACTTTCGAGGAGAAGGATGTGAAAGGGCACTTGCAGTAGCCATGTaGCAATACTCCAGCCAATGG +
Preference number: 4 (lower is better)
Translates to: CNPTKVQGDFRGEGCERALAVAM*QYSSQW
Trigger: CCATTGGCTGGAGTATTGTCACATGGCTACTGCAAG...TGCCCTTTCACATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTTGGATTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp ATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGCCCTCCCCTCACCTCTaGCCCCAAAGTAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: MSSGLKIKTTFPSLPCSLPSPHL*PQSRWR
Trigger: CCTCCACCTACTTTGGGGTCAGAGGTGAGGGGAGGG...CAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR GCA 90 bp AAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAATTGTGCTGCTCCTGTTaGCTAAGAGGGTGGTGCGCA +
Preference number: 4 (lower is better)
Translates to: KVSGMSSQLGVLWKSNSKLCCSC*LRGWCA
Trigger: TGCGCACCACCCTCTTAGGCAACAGGAGCAGCACAA...TTTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp TCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAATGTCCTAGCAGGTTCTTGTGCTaGTCCTGTTGCCTAAGAGGG +
Preference number: 4 (lower is better)
Translates to: SGMSSQLGVLWKSNSKCPSRFLC*SCCLRG
Trigger: CCCTCTTAGGCAACAGGAGCAGCACAAGAACCTGCT...AGGACATTTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp CAACATCTGTGTCTGCCCTCCACTCTTGTAAGGGCCAGTAAGGTAGTACCCAGTCTTAATGGAACTGACTaGAGGGTAGCTGCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: QHLCLPSTLVRASKVVPSLNGTD*RVAAVH
Trigger: GTGAACAGCAGCTACCCTGCAGTCAGTTCCATTAAG...ACTGGGTACTACCTTACTGGCCCTTACAAGAGTGGAGGGCAGACACAGATGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp ATTCCAAATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGGGCCCGAGCGCTCGCTaGCATGGACGTTCTGCACCT +
Preference number: 4 (lower is better)
Translates to: IPNVLWTQNKNYISQSPLGPSAR*HGRSAP
Trigger: AGGTGCAGAACGTCCATGGCAGCGAGCGCTCGGGCC...CAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACATTTGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp ATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGCCTGCAGGCACATCTTaGACCTGCAGCCGTAGGGCG +
Preference number: 4 (lower is better)
Translates to: MSSGLKIKTTFPSLPCSLPAGTS*TCSRRA
Trigger: CGCCCTACGGCTGCAGGTGCAAGATGTGCCTGCAGG...CAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp ATTCCAAATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGGTCCAGGCCAGGCTCTaGCACCACGCGTGCACCTTC +
Preference number: 4 (lower is better)
Translates to: IPNVLWTQNKNYISQSPLVQARL*HHACTF
Trigger: GAAGGTGCACGCGTGGTGGCAGAGCCTGGCCTGGAC...CAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACATTTGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp GGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCGTCATTCCAGAACCATaGAAAGGTGGAGTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: GTETKHGLLVAFPTMSKVVIPEP*KGGVAH
Trigger: GTGGGCAACTCCACCTTTGCATGGTTCTGGAATGAC...GACTTTTGACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp AGTAGATGGGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTGTCATTCCAGAACCATaGAAAGGTGGAGTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: SRWALRQNMACWWHSQQCVIPEP*KGGVAH
Trigger: GTGGGCAACTCCACCTTTGCATGGTTCTGGAATGAC...ACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp ATCTGGAGCAGGAATAAGGATGCTGACAACATCTGTGTCTGCCCTCCACTCTTGTTCTCGCCCATGCTCTaGTTACAAACACGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: IWSRNKDADNICVCPPLLFSPML*LQTRLL
Trigger: AAGGAGGCGTGTTTGTAAGCAGAGCATGGGCGAGAA...CAAGAGTGGAGGGCAGACACAGATGTTGTCAGCATCCTTATTCCTGCTCCAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp ATTCCAAATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTGGCTGCGGCGGTGCTaGACCTGCGGAGAGGAGAAC +
Preference number: 4 (lower is better)
Translates to: IPNVLWTQNKNYISQSPLWLRRC*TCGEEN
Trigger: GTTCTCCTCTCCGCAGGTCCAGCACCGCCGCAGCCA...CAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACATTTGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp GACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATTTCCAAGGGAGTTGGTaGCTGAGCACTTGTACTCCC +
Preference number: 4 (lower is better)
Translates to: DKTWPAGGIPNNVKSLRDFQGSW*LSTCTP
Trigger: GGGAGTACAAGTGCTCAGCCACCAACTCCCTTGGAA...ATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp ATCTGGAGCAGGAATAAGGATGCTGACAACATCTGTGTCTGCCCTCCACTCTTGCGTTGCAAGTCAAGTTaGCTTCTGTGCCCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: IWSRNKDADNICVCPPLLRCKSS*LLCPPE
Trigger: TTCAGGAGGGCACAGAAGCCAACTTGACTTGCAACG...CAAGAGTGGAGGGCAGACACAGATGTTGTCAGCATCCTTATTCCTGCTCCAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp TCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGCAGAGAAACCCTCATCCCTaGGCTGTGGCCCTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: SSGLKIKTTFPSLPCSLQRNPHP*AVALAA
Trigger: AGCTGCGAGGGCCACAGCCCAGGGATGAGGGTTTCT...CTGCAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp TCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGCAGGCGTTTCGGGCCACCTaGACATGGCCTGTCCCTGAT +
Preference number: 4 (lower is better)
Translates to: SSGLKIKTTFPSLPCSLQAFRAT*TWPVPD
Trigger: ATCAGGGACAGGCCATGTCCAGGTGGCCCGAAACGC...CTGCAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp CAACATCTGTGTCTGCCCTCCACTCTTGTAAGGGCCAGTAAGGTAGTACCCAGTCCAATGGGAAGTGAGTaGAAAAGTCCTGTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: QHLCLPSTLVRASKVVPSPMGSE*KSPVQL
Trigger: AAGCTGCACAGGACTTTTCCACTCACTTCCCATTGG...ACTGGGTACTACCTTACTGGCCCTTACAAGAGTGGAGGGCAGACACAGATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp CACTCAAGAGCTCTCTCCTGTTGGTCCCTGATTCGCAGGGGCACGTCATTCCTTCAGTTGGGAGTCCTTTaGAAGTCCAATTCCAAATGT +
Preference number: 4 (lower is better)
Translates to: HSRALSCWSLIRRGTSFLQLGVL*KSNSKC
Trigger: ACATTTGGAATTGGACTTCCAAAGGACTCCCAACTG...AAGGAATGACGTGCCCCTGCGAATCAGGGACCAACAGGAGAGAGCTCTTGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp AGTAGATGGGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCTGGCCCTCAGTAGATaGGCACTGAGACAAAACATG +
Preference number: 4 (lower is better)
Translates to: SRWALRQNMACWWHSQQCLALSR*ALRQNM
Trigger: CATGTTTTGTCTCAGTGCCCATCTACTGAGGGCCAG...ACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp CAGTCTCCAGATGCCAGTTGGCACTGTGGGTTAGCTGGGTATTATATCTGCCCGGAACAGAGATGCATCTaGAGCAGGAATAAGGATGCT +
Preference number: 4 (lower is better)
Translates to: QSPDASWHCGLAGYYICPEQRCI*SRNKDA
Trigger: AGCATCCTTATTCCTGCTCCAGATGCATCTCTGTTC...CGGGCAGATATAATACCCAGCTAACCCACAGTGCCAACTGGCATCTGGAGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CCA 90 bp ATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGTTGTGCAGAGTGGCCTaGGAGATGGAGCCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: MSSGLKIKTTFPSLPCSLLCRVA*EMEPPP
Trigger: GGGAGGGGGCTCCATCTCCCAGGCCACTCTGCACAA...CAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CCA 90 bp ACTCAACACTGCCTCATTCACATTCATAGGCTGGAGTCATCACAGATTCTGGCCTTTGGGCCTAAGAGCTaGGCTTTTGTGCAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: TQHCLIHIHRLESSQILAFGPKS*AFVQSG
Trigger: GCCACTCTGCACAAAAGCCCAGCTCTTAGGCCCAAA...GGCCAGAATCTGTGATGACTCCAGCCTATGAATGTGAATGAGGCAGTGTTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CCA 90 bp CAGCCAATGGGAAGTGAGTGGAAAAGTCCTGTGCAGCTTCTGAGTTGCGTCCACGAATGGATACCTGCGTaGTCTCTTTCTGAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: QPMGSEWKSPVQLLSCVHEWIPA*SLSEKP
Trigger: TGGCTTTTCAGAAAGAGACCACGCAGGTATCCATTC...GTGGACGCAACTCAGAAGCTGCACAGGACTTTTCCACTCACTTCCCATTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR TCA 90 bp TCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGCAGGACCAGAGGTACCACTaGAGCGTGGGCTGTGATCAC +
Preference number: 4 (lower is better)
Translates to: SSGLKIKTTFPSLPCSLQDQRYH*SVGCDH
Trigger: GTGATCACAGCCCACGCTTCAGTGGTACCTCTGGTC...CTGCAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR TCA 90 bp ATTCCAAATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGCCGCACAGGTCACTGTaGTGGGGGCACCTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: IPNVLWTQNKNYISQSPLPHRSL*WGHLQA
Trigger: TGCCTGAAGGTGCCCCCATCACAGTGACCTGTGCGG...CAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACATTTGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp GCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTTGCGTGGTCTCTTTCTaGAAAGCCATCTCCACCGAA +
Preference number: 4 (lower is better)
Translates to: AFPTMSKVSGMSSQLGVLCVVSF*KAISTE
Trigger: TTCGGTGGAGATGGCTTTTCAGAAAGAGACCACGCA...AAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp TCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAATGTCCTTCAGTAGATGGGCACTaGGACAAAACATGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: SGMSSQLGVLWKSNSKCPSVDGH*DKTWPA
Trigger: AGCAGGCCATGTTTTGTCTCAGTGCCCATCTACTGA...AGGACATTTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp CTTGGTAACTCATTCTCTTTAACAGCCCGACACAGGGTCTCCAGGAAAAGGACAGAGCTCACACAGTCATaGACAGAGATGCATCTGGAG +
Preference number: 4 (lower is better)
Translates to: LGNSFSLTARHRVSRKRTELTQS*TEMHLE
Trigger: CTCCAGATGCATCTCTGTTCATGACTGTGTGAGCTC...TGTCCTTTTCCTGGAGACCCTGTGTCGGGCTGTTAAAGAGAATGAGTTACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp ATTCCAAATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGCTGAGGTGGAGGCGTTaGCCAGGGCATTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: IPNVLWTQNKNYISQSPLLRWRR*PGHCWP
Trigger: AGGCCAGCAATGCCCTGGGCAACGCCTCCACCTCAG...CAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACATTTGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp ATTCCAAATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGGCAGCTGGACCCTCCTaGAGCCAACGACCGTTGTGG +
Preference number: 4 (lower is better)
Translates to: IPNVLWTQNKNYISQSPLAAGPS*SQRPLW
Trigger: CCACAACGGTCGTTGGCTGCAGGAGGGTCCAGCTGC...CAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACATTTGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp TGCTGCAATCCAACCAAAGTCCAGGGTGACTTTCGAGGAGAAGGATGTGAAAGGGGCAGGACTCAACACTaGCTCATTCACATTCATAGG +
Preference number: 4 (lower is better)
Translates to: CCNPTKVQGDFRGEGCERGRTQH*LIHIHR
Trigger: CCTATGAATGTGAATGAGGCAGTGTTGAGTCCTGCC...CCTTTCACATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTTGGATTGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp ACTCAACACTGCCTCATTCACATTCATAGGCTGGAGTCATCACAGATTCTGGCCGAGGATGCAGGATGCTaGAATCCAACCAAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: TQHCLIHIHRLESSQILAEDAGC*NPTKVQ
Trigger: CTGGACTTTGGTTGGATTGCAGCATCCTGCATCCTC...GGCCAGAATCTGTGATGACTCCAGCCTATGAATGTGAATGAGGCAGTGTTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp AGTAGATGGGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCTGTTGAATACAGAATaGCTTGGTGAGCCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: SRWALRQNMACWWHSQQCLLNTE*LGEPLR
Trigger: CCTCAGAGGCTCACCAAGGCATTCTGTATTCAACAG...ACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp AGGAGATCCAGAGAAGAGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGTCATGAACAGAGATaGATCTGGAGCAGGAATAAG +
Preference number: 4 (lower is better)
Translates to: RRSREERARSAQCSSVSSSHEQR*IWSRNK
Trigger: CTTATTCCTGCTCCAGATGCATCTCTGTTCATGACT...GGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCTCTTCTCTGGATCTCCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp CCAGATGCCAGTTGGCACTGTGGGTTAGCTGGGTATTATATCTGCCCGTGTGTGAGTCATGAACAGAGATaGATCTGGAGCAGGAATAAG +
Preference number: 4 (lower is better)
Translates to: PDASWHCGLAGYYICPCVSHEQR*IWSRNK
Trigger: CTTATTCCTGCTCCAGATGCATCTCTGTTCATGACT...CACACACGGGCAGATATAATACCCAGCTAACCCACAGTGCCAACTGGCATCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR GCA 90 bp ACTCAACACTGCCTCATTCACATTCATAGGCTGGAGTCATCACAGATTCTGGCCTCGACAGGCAAATCATaGTGCAGCAGGAGGGATACA +
Preference number: 4 (lower is better)
Translates to: TQHCLIHIHRLESSQILASTGKS*CSRRDT
Trigger: TGTATCCCTCCTGCTGCAGCATGATTTGCCTGTCGA...GGCCAGAATCTGTGATGACTCCAGCCTATGAATGTGAATGAGGCAGTGTTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR GCA 90 bp GATCCAGAGAAGAGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGACACCTTCTAACTTTTaGTTTATCGCTGAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: DPEKRERDQLSALQCPPGTPSNF*FIAEAL
Trigger: GAGAGCTTCAGCGATAAAGCAAAAGTTAGAAGGTGT...CCCTGGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCTCTTCTCTGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CCA 90 bp GACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATGGATCTTCACACCCTTaGGGGCATACTTCACTTGGA +
Preference number: 4 (lower is better)
Translates to: DKTWPAGGIPNNVKSLRDGSSHP*GHTSLG
Trigger: TCCAAGTGAAGTATGCCCCCAAGGGTGTGAAGATCC...ATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp GATCCAGAGAAGAGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGAGAAGAGTGAGGTGTTaGATGATCCAAGAACATTTG +
Preference number: 4 (lower is better)
Translates to: DPEKRERDQLSALQCPPGRRVRC*MIQEHL
Trigger: CAAATGTTCTTGGATCATCCAACACCTCACTCTTCT...CCCTGGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCTCTTCTCTGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp GACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATCTTGTGTCAAAGTTATaGCTGCAAAGCGGAGCGTGG +
Preference number: 4 (lower is better)
Translates to: DKTWPAGGIPNNVKSLRDLVSKL*LQSGAW
Trigger: CCACGCTCCGCTTTGCAGCCATAACTTTGACACAAG...ATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp ATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGTCACAGCCATGGATCTaGCCCTGGAGTCCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: MSSGLKIKTTFPSLPCSLSQPWI*PWSPGR
Trigger: CCTTCCGGGACTCCAGGGCCAGATCCATGGCTGTGA...CAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp ATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGAGTCGACTGCCAAGGTaGAGAGTCAGGCTGGCGAGC +
Preference number: 4 (lower is better)
Translates to: MSSGLKIKTTFPSLPCSLSRLPR*RVRLAS
Trigger: GCTCGCCAGCCTGACTCTCCACCTTGGCAGTCGACT...CAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp CAGCCAATGGGAAGTGAGTGGAAAAGTCCTGTGCAGCTTCTGAGTTGCGTCCACCAGTTGGGAGTCCTTTaGAAGTCCAATTCCAAATGT +
Preference number: 4 (lower is better)
Translates to: QPMGSEWKSPVQLLSCVHQLGVL*KSNSKC
Trigger: ACATTTGGAATTGGACTTCCAAAGGACTCCCAACTG...GTGGACGCAACTCAGAAGCTGCACAGGACTTTTCCACTCACTTCCCATTGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp GACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATCTGGCCCTCAGTAGATaGGCACTGAGACAAAACATG +
Preference number: 4 (lower is better)
Translates to: DKTWPAGGIPNNVKSLRDLALSR*ALRQNM
Trigger: CATGTTTTGTCTCAGTGCCCATCTACTGAGGGCCAG...ATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp GGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTTCAGGGGCCAAATCTaGCACAAGGATGTCTGCTTA +
Preference number: 4 (lower is better)
Translates to: GTETKHGLLVAFPTMSKVFRGQI*HKDVCL
Trigger: TAAGCAGACATCCTTGTGCCAGATTTGGCCCCTGAA...GACTTTTGACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp GAGGTCTCACATGTGGCTGCATCAGGATCAATGAGCTTCCCACAGAGAAAACCCTGCCAGTTGGCACTGTaGGTTAGCTGGGTATTATAT +
Preference number: 4 (lower is better)
Translates to: EVSHVAASGSMSFPQRKPCQLAL*VSWVLY
Trigger: ATATAATACCCAGCTAACCCACAGTGCCAACTGGCA...GGGTTTTCTCTGTGGGAAGCTCATTGATCCTGATGCAGCCACATGTGAGACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CCA 90 bp TCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAATGTCCTTACGTGTCTTGGAAATaGAGGGGATGCTGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: SGMSSQLGVLWKSNSKCPYVSWK*RGCCQV
Trigger: GACTTGGCAGCATCCCCTCCATTTCCAAGACACGTA...AGGACATTTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR TCA 90 bp ATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGCTTGCCACTGCAGTCTaGCCTGCTCCTGCAGGCATA +
Preference number: 4 (lower is better)
Translates to: MSSGLKIKTTFPSLPCSLLATAV*PAPAGI
Trigger: TATGCCTGCAGGAGCAGGTCAGACTGCAGTGGCAAG...CAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR TCA 90 bp ATTCCAAATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGAGAGCACACGGAGCATaGCTGGAGCAGAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: IPNVLWTQNKNYISQSPLRAHGA*LEQRQQ
Trigger: CTGCTGCCTCTGCTCCAGTCATGCTCCGTGTGCTCT...CAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACATTTGGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp TCATTCACATTCATAGGCTGGAGTCATCACAGATTCTGGCCACTTTCTCCTCCGAGAGCCCAGGACATTTaGGGCAGAACAGATGTATTC +
Preference number: 4 (lower is better)
Translates to: SFTFIGWSHHRFWPLSPPRAQDI*GRTDVF
Trigger: GAATACATCTGTTCTGCCTCAAATGTCCTGGGCTCT...CGGAGGAGAAAGTGGCCAGAATCTGTGATGACTCCAGCCTATGAATGTGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp GCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTCATAGCAGGTTCTTGTaGTGCTCCTGTTGCCTAAGA +
Preference number: 4 (lower is better)
Translates to: AFPTMSKVSGMSSQLGVLHSRFL*CSCCLR
Trigger: TCTTAGGCAACAGGAGCAGCACAAGAACCTGCTATG...AAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp AAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAAATAGGTGTCATCACCTaGAGGCACATCTTGCACCTG +
Preference number: 4 (lower is better)
Translates to: KVSGMSSQLGVLWKSNSKIGVIT*RHILHL
Trigger: CAGGTGCAAGATGTGCCTGCAGGTGATGACACCTAT...TTTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp ACTCAACACTGCCTCATTCACATTCATAGGCTGGAGTCATCACAGATTCTGGCCGGCAGGACTCAACACTaGCTCATTCACATTCATAGG +
Preference number: 4 (lower is better)
Translates to: TQHCLIHIHRLESSQILAGRTQH*LIHIHR
Trigger: CCTATGAATGTGAATGAGGCAGTGTTGAGTCCTGCC...GGCCAGAATCTGTGATGACTCCAGCCTATGAATGTGAATGAGGCAGTGTTGAGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp GCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTCTGTTGAATACAGAATaGCTTGGTGAGCCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: AFPTMSKVSGMSSQLGVLLLNTE*LGEPLR
Trigger: CCTCAGAGGCTCACCAAGGCATTCTGTATTCAACAG...AAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp TCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGCAGCTTAGGCAACTCCACTaGCTGGCATGCTCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: SSGLKIKTTFPSLPCSLQLRQLH*LACSLP
Trigger: AGGGAGAGAGCATGCCAGGCAGTGGAGTTGCCTAAG...CTGCAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp TGCTGCAATCCAACCAAAGTCCAGGGTGACTTTCGAGGAGAAGGATGTGAAAGGGCTGGGTATTATATCTaGCCGTGTGTGTTGAATGGA +
Preference number: 4 (lower is better)
Translates to: CCNPTKVQGDFRGEGCERAGYYI*PCVLNG
Trigger: TCCATTCAACACACACGGGCAGATATAATACCCAGC...CCTTTCACATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTTGGATTGCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR GCA 90 bp ATTCCAAATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGCACAGGGATTCCCTCTaGCCCGAGCAGAACAGGGCT +
Preference number: 4 (lower is better)
Translates to: IPNVLWTQNKNYISQSPLHRDSL*PEQNRA
Trigger: AGCCCTGTTCTGCTCGGGGCAGAGGGAATCCCTGTG...CAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACATTTGGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CCA 90 bp TCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGCAGTGTGACCAGCTCACCTaGAAGGATGTTCCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: SSGLKIKTTFPSLPCSLQCDQLT*KDVPPR
Trigger: TCGGGGAGGAACATCCTTCCAGGTGAGCTGGTCACA...CTGCAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp CTTCTTGGTAACTCATTCTCTTTAACAGCCCGACACAGGGTCTCCAGGAAAAGGCCAATGGGAAGTGAGTaGAAAAGTCCTGTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: LLGNSFSLTARHRVSRKRPMGSE*KSPVQL
Trigger: AAGCTGCACAGGACTTTTCCACTCACTTCCCATTGG...CCTTTTCCTGGAGACCCTGTGTCGGGCTGTTAAAGAGAATGAGTTACCAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp TGCAATCCAACCAAAGTCCAGGGTGACTTTCGAGGAGAAGGATGTGAAAGGGCACAATACTCCAGCCAATaGGAAGTGAGTGGAAAAGTC +
Preference number: 4 (lower is better)
Translates to: CNPTKVQGDFRGEGCERAQYSSQ*EVSGKV
Trigger: GACTTTTCCACTCACTTCCCATTGGCTGGAGTATTG...TGCCCTTTCACATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTTGGATTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp GCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTCAAAACATGGCCTGCTaGTGGCATTCCCAACAATGT +
Preference number: 4 (lower is better)
Translates to: AFPTMSKVSGMSSQLGVLQNMAC*WHSQQC
Trigger: ACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTG...AAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp TCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAATGTCCTCAAAACATGGCCTGCTaGTGGCATTCCCAACAATGT +
Preference number: 4 (lower is better)
Translates to: SGMSSQLGVLWKSNSKCPQNMAC*WHSQQC
Trigger: ACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTG...AGGACATTTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp TCATTCACATTCATAGGCTGGAGTCATCACAGATTCTGGCCACTTTCTCCTCCGTTCAGGGGCCAAATCTaGCACAAGGATGTCTGCTTA +
Preference number: 4 (lower is better)
Translates to: SFTFIGWSHHRFWPLSPPFRGQI*HKDVCL
Trigger: TAAGCAGACATCCTTGTGCCAGATTTGGCCCCTGAA...CGGAGGAGAAAGTGGCCAGAATCTGTGATGACTCCAGCCTATGAATGTGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp GCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTAGGATGGAGTTTTATTaGGAGGACATTCTGGACGGG +
Preference number: 4 (lower is better)
Translates to: AFPTMSKVSGMSSQLGVLRMEFY*EDILDG
Trigger: CCCGTCCAGAATGTCCTCCCAATAAAACTCCATCCT...AAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp AAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAAGAGCCCAGGACATTTaGGGCAGAACAGATGTATTC +
Preference number: 4 (lower is better)
Translates to: KSLRDELTVGSPLEVQFQRAQDI*GRTDVF
Trigger: GAATACATCTGTTCTGCCTCAAATGTCCTGGGCTCT...TTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR GCA 90 bp ATTCCAAATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGGGCTTAGGCCGCTTCTaGAGCTCAGTGTCACTGCCT +
Preference number: 4 (lower is better)
Translates to: IPNVLWTQNKNYISQSPLGLGRF*SSVSLP
Trigger: AGGCAGTGACACTGAGCTGCAGAAGCGGCCTAAGCC...CAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACATTTGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR GCA 90 bp TCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGCAGGCTCACTGTCCACAGTaGACTGTATCACAGCCATGG +
Preference number: 4 (lower is better)
Translates to: SSGLKIKTTFPSLPCSLQAHCPQ*TVSQPW
Trigger: CCATGGCTGTGATACAGTGCACTGTGGACAGTGAGC...CTGCAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
3UTR CAA 72 bp TGTGGGTTAGCTGGGTATTATATCTGCCCGTGTGTGTaGAATGGATACCTGCGTGGTCTCTTTCTGAAAAGC +
Preference number: 4 (lower is better)
Translates to: CGLAGYYICPCV*NGYLRGLFLKS
Trigger: GCTTTTCAGAAAGAGACCACGCAGGTATCCATTCAACACACACGGGCAGATATAATACCCAGCTAACCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR GCA 90 bp ATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGGTCCAGGGTGGAGGTTaGATTTCCAAGGGAGTTGGT +
Preference number: 4 (lower is better)
Translates to: MSSGLKIKTTFPSLPCSLVQGGG*ISKGVG
Trigger: ACCAACTCCCTTGGAAATGCAACCTCCACCCTGGAC...CAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp ATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGTGTAGCGGAGATCACTaGGTGCCTCATTGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: MSSGLKIKTTFPSLPCSLCSGDH*VPHWVC
Trigger: ACACACCCAATGAGGCACCCAGTGATCTCCGCTACA...CAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp ATTCCAAATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGACTGTATCACAGCCATaGATCTGGCCCTGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: IPNVLWTQNKNYISQSPLTVSQP*IWPWSP
Trigger: GGGACTCCAGGGCCAGATCCATGGCTGTGATACAGT...CAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACATTTGGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp ATTCCAAATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTGCACATTCACAGCTTaGGCGTCGAAGTCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: IPNVLWTQNKNYISQSPLCTFTA*ASKSAE
Trigger: CTCAGCTGACTTCGACGCTCAAGCTGTGAATGTGCA...CAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACATTTGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR TCA 90 bp ATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGTGCGTGGTCTCTTTCTaGAAAGCCATCTCCACCGAA +
Preference number: 4 (lower is better)
Translates to: MSSGLKIKTTFPSLPCSLCVVSF*KAISTE
Trigger: TTCGGTGGAGATGGCTTTTCAGAAAGAGACCACGCA...CAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp ATTCCAAATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGACACCAGTCTTGGTTTaGAGGCGTACCCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: IPNVLWTQNKNYISQSPLTPVLV*RRTPSL
Trigger: CAAGGATGGGGTACGCCTCCAAACCAAGACTGGTGT...CAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACATTTGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp ATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGATCCAAGAACATTTGTaGCCTCACAGCGGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: MSSGLKIKTTFPSLPCSLIQEHL*PHSGSC
Trigger: GCAGCTACCGCTGTGAGGCCACAAATGTTCTTGGAT...CAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CCA 90 bp AAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAATTCACATTCATAGGCTaGAGTCATCACAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: KSLRDELTVGSPLEVQFQFTFIG*SHHRFW
Trigger: CCAGAATCTGTGATGACTCCAGCCTATGAATGTGAA...TTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CCA 90 bp TCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGCAGAGGATGGAGTTTTATTaGGAGGACATTCTGGACGGG +
Preference number: 4 (lower is better)
Translates to: SSGLKIKTTFPSLPCSLQRMEFY*EDILDG
Trigger: CCCGTCCAGAATGTCCTCCCAATAAAACTCCATCCT...CTGCAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp ATTCCAAATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGGGGACCCACCCAAGATaGCACCTTCTAACTTTTGCT +
Preference number: 4 (lower is better)
Translates to: IPNVLWTQNKNYISQSPLGTHPR*HLLTFA
Trigger: AGCAAAAGTTAGAAGGTGTCATCTTGGGTGGGTCCC...CAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACATTTGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR TCA 90 bp ATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGCTGCATCAGGATCAATaGGCTTCCCACAGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: MSSGLKIKTTFPSLPCSLLHQDQ*ASHREN
Trigger: GTTTTCTCTGTGGGAAGCTCATTGATCCTGATGCAG...CAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CCA 90 bp ATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGCAATACTCCAGCCAATaGGAAGTGAGTGGAAAAGTC +
Preference number: 4 (lower is better)
Translates to: MSSGLKIKTTFPSLPCSLQYSSQ*EVSGKV
Trigger: GACTTTTCCACTCACTTCCCATTGGCTGGAGTATTG...CAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR TCA 90 bp ATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGTTAGAGCAGGCTGACTaGTACTCTGTTGAATACAGA +
Preference number: 4 (lower is better)
Translates to: MSSGLKIKTTFPSLPCSLLEQAD*YSVEYR
Trigger: TCTGTATTCAACAGAGTATCAGTCAGCCTGCTCTAA...CAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS TCA 90 bp AGAGGGGCCACTGGCACTGTGGCCGTCCCGGGCCCGGCAGTGGTATaGGCCGGCGTCAGTGCTGGAGGCCGCGGGGAGCAGGAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: RGATGTVAVPGPAVV*AGVSAGGRGEQEAA
Trigger: AGCAGCCTCCTGCTCCCCGCGGCCTCCAGCACTGACGCCGGCTCATACCACTGCCGGGCCCGGGACGGCCACAGTGCCAGTGGCCCCTCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 90 bp CGGAGAGCTGGCAGCGCAGGATCCGGCCGTGGTCCTGCCAGGACATaGCCATGTGGAGGGTCTCCAGGTGGCCGACGCCGGTGGGCTCAA +
Preference number: 5 (lower is better)
Translates to: RRAGSAGSGRGPART*PCGGSPGGRRRWAQ
Trigger: TTGAGCCCACCGGCGTCGGCCACCTGGAGACCCTCCACATGGCCATGTCCTGGCAGGACCACGGCCGGATCCTGCGCTGCCAGCTCTCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS GCA 90 bp GAGTCCTCGGGCTGCAGGTCCTTCAGCAGCAGGTTGCACACCCTGTaGTCGGGGTTCCCCATGAACTCGGTGCGGCCGCGGAAGCGGGCC +
Preference number: 5 (lower is better)
Translates to: ESSGCRSFSSRLHTL*SGFPMNSVRPRKRA
Trigger: GGCCCGCTTCCGCGGCCGCACCGAGTTCATGGGGAACCCCGAGCACAGGGTGTGCAACCTGCTGCTGAAGGACCTGCAGCCCGAGGACTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS GCA 90 bp GAGGGGCATAGAGGACTTGCAGGGCAGCAGGACGGGAGCTGCGGGTaGCCTGGGCATCCTGGGCCTGGCAAGAGTAGGCGCCTGCATGAG +
Preference number: 5 (lower is better)
Translates to: EGHRGLAGQQDGSCG*PGHPGPGKSRRLHE
Trigger: CTCATGCAGGCGCCTACTCTTGCCAGGCCCAGGATGCCCAGGGCACCCGCAGCTCCCGTCCTGCTGCCCTGCAAGTCCTCTATGCCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS CCA 90 bp TGGCAGCGCAGGATCCGGCCGTGGTCCTGCCAGGACATGGCCATGTaGAGGGTCTCCAGGTGGCCGACGCCGGTGGGCTCAAACTTCTGG +
Preference number: 5 (lower is better)
Translates to: WQRRIRPWSCQDMAM*RVSRWPTPVGSNFW
Trigger: CCAGAAGTTTGAGCCCACCGGCGTCGGCCACCTGGAGACCCTCCACATGGCCATGTCCTGGCAGGACCACGGCCGGATCCTGCGCTGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 90 bp AACAGCCCCCACAGGTGCTGCAGCCACCCCCTGATGGCAGGGAAGTaGCCACAACACGGTCCTTGTGGAGCAGCTGCAGCCTGGCGGGGG +
Preference number: 5 (lower is better)
Translates to: NSPHRCCSHPLMAGK*PQHGPCGAAAAWRG
Trigger: CCCCCGCCAGGCTGCAGCTGCTCCACAAGGACCGTGTTGTGGCCACTTCCCTGCCATCAGGGGGTGGCTGCAGCACCTGTGGGGGCTGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 90 bp CCAGGATCACCCGCACACCCTCCAGCCGCAGCTCCAGGGACGTGTTaGCCTGGCCCAGAGGGCTGCGGGCAGAGCAGCTGTAGAAACCCT +
Preference number: 5 (lower is better)
Translates to: PGSPAHPPAAAPGTC*PGPEGCGQSSCRNP
Trigger: AGGGTTTCTACAGCTGCTCTGCCCGCAGCCCTCTGGGCCAGGCCAACACGTCCCTGGAGCTGCGGCTGGAGGGTGTGCGGGTGATCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS TCA 90 bp GCAGCCCCAGTGGGGAGCTCAGCCAGGCAGTGGTACATCCCAGCTTaGGCACGAGCCACGTGGGTGAAGGCGAGAGTGGGCACAGGCTCC +
Preference number: 5 (lower is better)
Translates to: AAPVGSSARQWYIPA*ARATWVKARVGTGS
Trigger: GGAGCCTGTGCCCACTCTCGCCTTCACCCACGTGGCTCGTGCTCAAGCTGGGATGTACCACTGCCTGGCTGAGCTCCCCACTGGGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS GCA 90 bp GAGTCAGGCTGGCGAGCGGCTCGCTGTCCACTCGGCAATCCAGGATaGCCCGGAGGCCACCCTCAGGCTCCACGAAGACCATCATGGTGG +
Preference number: 5 (lower is better)
Translates to: ESGWRAARCPLGNPG*PGGHPQAPRRPSWW
Trigger: CCACCATGATGGTCTTCGTGGAGCCTGAGGGTGGCCTCCGGGGCATCCTGGATTGCCGAGTGGACAGCGAGCCGCTCGCCAGCCTGACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS CCA 90 bp GCTGACTGGAGGCCACCAGTCGACTGCCAAGGTGGAGAGTCAGGCTaGCGAGCGGCTCGCTGTCCACTCGGCAATCCAGGATGCCCCGGA +
Preference number: 5 (lower is better)
Translates to: ADWRPPVDCQGGESG*RAARCPLGNPGCPG
Trigger: TCCGGGGCATCCTGGATTGCCGAGTGGACAGCGAGCCGCTCGCCAGCCTGACTCTCCACCTTGGCAGTCGACTGGTGGCCTCCAGTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS GCA 90 bp GCACGAGCCACGTGGGTGAAGGCGAGAGTGGGCACAGGCTCCGCGTaGAGCCGCCGGTCATTCCAGAACCATGCAAAGGTGGAGTTGCCC +
Preference number: 5 (lower is better)
Translates to: ARATWVKARVGTGSA*SRRSFQNHAKVELP
Trigger: GGGCAACTCCACCTTTGCATGGTTCTGGAATGACCGGCGGCTGCACGCGGAGCCTGTGCCCACTCTCGCCTTCACCCACGTGGCTCGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS CCA 90 bp CCCCAGCACCTGCTGCTCCACAGAAGGAAGTGGCTGCGGCGGTGCTaGACCTGCGGAGAGGAGAACAGGAAGGACGGCCAAGAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: PQHLLLHRRKWLRRC*TCGEENRKDGQELL
Trigger: CAGGAGCTCTTGGCCGTCCTTCCTGTTCTCCTCTCCGCAGGTCCAGCACCGCCGCAGCCACTTCCTTCTGTGGAGCAGCAGGTGCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 90 bp ACATCTTGCACCTGCAGCCGTAGGGCGTTTCGGGCCACCTGGACATaGCCTGTCCCTGATGCCAAGCTGTGGACCCCGCTGCTCGTGGCC +
Preference number: 5 (lower is better)
Translates to: TSCTCSRRAFRATWT*PVPDAKLWTPLLVA
Trigger: GGCCACGAGCAGCGGGGTCCACAGCTTGGCATCAGGGACAGGCCATGTCCAGGTGGCCCGAAACGCCCTACGGCTGCAGGTGCAAGATGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS CCA 90 bp GCAGGCACATCTTGCACCTGCAGCCGTAGGGCGTTTCGGGCCACCTaGACATGGCCTGTCCCTGATGCCAAGCTGTGGACCCCGCTGCTC +
Preference number: 5 (lower is better)
Translates to: AGTSCTCSRRAFRAT*TWPVPDAKLWTPLL
Trigger: GAGCAGCGGGGTCCACAGCTTGGCATCAGGGACAGGCCATGTCCAGGTGGCCCGAAACGCCCTACGGCTGCAGGTGCAAGATGTGCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CAA 90 bp TCAGAGCAGCCACAGCTGCAGGCCCCCAGTGCTTCCTTCCAAGGGGACCCACCCCATGCAAAGGTGGAGTaGCCCACAGGCCCAGGGCCA +
Preference number: 5 (lower is better)
Translates to: SEQPQLQAPSASFQGDPPHAKVE*PTGPGP
Trigger: TGGCCCTGGGCCTGTGGGCAACTCCACCTTTGCATG...GGGTGGGTCCCCTTGGAAGGAAGCACTGGGGGCCTGCAGCTGTGGCTGCTCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS TCA 90 bp TATAGAGTGTGGGTGCGTGGGCAGCAGGGTCCGCACAGGTCACTGTaGTGGGGGCACCTTCAGGCACGGCAGCCTCCGGAGCCAGGATCA +
Preference number: 5 (lower is better)
Translates to: YRVWVRGQQGPHRSL*WGHLQARQPPEPGS
Trigger: TGATCCTGGCTCCGGAGGCTGCCGTGCCTGAAGGTGCCCCCATCACAGTGACCTGTGCGGACCCTGCTGCCCACGCACCCACACTCTATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS GCA 90 bp GCCCATAGCAGGTTCTTGTGCTGCTCCTGTTGCCTAAGAGGGTGGTaGGCACTGCGCTGGCTGGGCTCACAGGGGCCTCCAGGGACACCT +
Preference number: 5 (lower is better)
Translates to: AHSRFLCCSCCLRGW*ALRWLGSQGPPGTP
Trigger: AGGTGTCCCTGGAGGCCCCTGTGAGCCCAGCCAGCGCAGTGCGCACCACCCTCTTAGGCAACAGGAGCAGCACAAGAACCTGCTATGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS GCA 90 bp GGTACCAGGAGAAGCGGGCATCAGGTGTGGGGCTTAGGCCGCTTCTaGAGCTCAGTGTCACTGCCTGTCCTTCCACCACCTCGGCTGCCG +
Preference number: 5 (lower is better)
Translates to: GTRRSGHQVWGLGRF*SSVSLPVLPPPRLP
Trigger: CGGCAGCCGAGGTGGTGGAAGGACAGGCAGTGACACTGAGCTGCAGAAGCGGCCTAAGCCCCACACCTGATGCCCGCTTCTCCTGGTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 90 bp CGGCCGTGGTCCTGCCAGGACATGGCCATGTGGAGGGTCTCCAGGTaGCCGACGCCGGTGGGCTCAAACTTCTGGCTGTTGAAGGTGACA +
Preference number: 5 (lower is better)
Translates to: RPWSCQDMAMWRVSR*PTPVGSNFWLLKVT
Trigger: TGTCACCTTCAACAGCCAGAAGTTTGAGCCCACCGGCGTCGGCCACCTGGAGACCCTCCACATGGCCATGTCCTGGCAGGACCACGGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 90 bp CCAGGACATGGATGTGTGGCTCTGCAGGAGCACCCTGGGGCTGACTaGAGGCCACCAGTCGACTGCCAAGGTGGAGAGTCAGGCTGGCGA +
Preference number: 5 (lower is better)
Translates to: PGHGCVALQEHPGAD*RPPVDCQGGESGWR
Trigger: TCGCCAGCCTGACTCTCCACCTTGGCAGTCGACTGGTGGCCTCCAGTCAGCCCCAGGGTGCTCCTGCAGAGCCACACATCCATGTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS CCA 90 bp CTTGGTCGCTGGGCCTCAGCGCCTCGATGTCCACCCTCAGGGCATTaGGGGAAGCCAGGACATGGATGTGTGGCTCTGCAGGAGCACCCT +
Preference number: 5 (lower is better)
Translates to: LGRWASAPRCPPSGH*GKPGHGCVALQEHP
Trigger: AGGGTGCTCCTGCAGAGCCACACATCCATGTCCTGGCTTCCCCCAATGCCCTGAGGGTGGACATCGAGGCGCTGAGGCCCAGCGACCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CAA 90 bp TCAGAGCAGCCACAGCTGCAGGCCCCCAGTGCTTCCTTCCAAGGGGACCCACCCGGGGTCCCAAGAGGATaGGTGGGAGTGTGCATGGCT +
Preference number: 5 (lower is better)
Translates to: SEQPQLQAPSASFQGDPPGVPRG*VGVCMA
Trigger: AGCCATGCACACTCCCACCAATCCTCTTGGGACCCC...GGGTGGGTCCCCTTGGAAGGAAGCACTGGGGGCCTGCAGCTGTGGCTGCTCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS TCA 90 bp GCCAAGCTGTGGACCCCGCTGCTCGTGGCCAGCACCTTGCCATCATaGGATAGGGCCAGCTCAGCAGGTGGCTCACTGTCCACAGTGCAC +
Preference number: 5 (lower is better)
Translates to: AKLWTPLLVASTLPS*DRASSAGGSLSTVH
Trigger: GTGCACTGTGGACAGTGAGCCACCTGCTGAGCTGGCCCTATCTCATGATGGCAAGGTGCTGGCCACGAGCAGCGGGGTCCACAGCTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS TCA 90 bp GAAGCCAGGACATGGATGTGTGGCTCTGCAGGAGCACCCTGGGGCTaGCTGGAGGCCACCAGTCGACTGCCAAGGTGGAGAGTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: EARTWMCGSAGAPWG*LEATSRLPRWRVRL
Trigger: CAGCCTGACTCTCCACCTTGGCAGTCGACTGGTGGCCTCCAGTCAGCCCCAGGGTGCTCCTGCAGAGCCACACATCCATGTCCTGGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS CCA 90 bp GAAGCCCATAGCAGGTTCTTGTGCTGCTCCTGTTGCCTAAGAGGGTaGTGCGCACTGCGCTGGCTGGGCTCACAGGGGCCTCCAGGGACA +
Preference number: 5 (lower is better)
Translates to: EAHSRFLCCSCCLRG*CALRWLGSQGPPGT
Trigger: TGTCCCTGGAGGCCCCTGTGAGCCCAGCCAGCGCAGTGCGCACCACCCTCTTAGGCAACAGGAGCAGCACAAGAACCTGCTATGGGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 90 bp GGGCATACTTCACTTGGAGGTGAATCTCGCTCTGAGCCCTGTGATTaGCCACGGAGAGCTGGCAGCGCAGGATCCGGCCGTGGTCCTGCC +
Preference number: 5 (lower is better)
Translates to: GHTSLGGESRSEPCD*PRRAGSAGSGRGPA
Trigger: GGCAGGACCACGGCCGGATCCTGCGCTGCCAGCTCTCCGTGGCCAATCACAGGGCTCAGAGCGAGATTCACCTCCAAGTGAAGTATGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 90 bp TCAGTTCTGGCCACGGGCAGCAGTGTCACGGTCTCCAGGGGACCCTaGGCCCACAGCACCCCATTTCGGAACCAGGAGAAGTTAGCAGGG +
Preference number: 5 (lower is better)
Translates to: SVLATGSSVTVSRGP*AHSTPFRNQEKLAG
Trigger: CCCTGCTAACTTCTCCTGGTTCCGAAATGGGGTGCTGTGGGCCCAGGGTCCCCTGGAGACCGTGACACTGCTGCCCGTGGCCAGAACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp TATTGGGAGGACATTCTGGACGGGCTCCCAGCAAGAGTCTGGCAATGGAGCATGCGGGCCTCCACCAGCTaGGGGTCCGCCGAGTGGCTC +
Preference number: 5 (lower is better)
Translates to: YWEDILDGLPARVWQWSMRASTS*GSAEWL
Trigger: GAGCCACTCGGCGGACCCCAAGCTGGTGGAGGCCCG...CATGCTCCATTGCCAGACTCTTGCTGGGAGCCCGTCCAGAATGTCCTCCCAATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp GAGGGTGCGGCCTCGGCTACACAAAGTTCACCCGCCCCCAACTGCCTCCCAGCGCACACCAGTCTTGGTTaGGAGGCGTACCCCATCCTT +
Preference number: 5 (lower is better)
Translates to: EGAASATQSSPAPNCLPAHTSLG*EAYPIL
Trigger: AAGGATGGGGTACGCCTCCAAACCAAGACTGGTGTG...CGCTGGGAGGCAGTTGGGGGCGGGTGAACTTTGTGTAGCCGAGGCCGCACCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp GAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCTGGGCAGGCTGAGGTGGAGGCGTaGCCCAGGGCATTGCTGGCC +
Preference number: 5 (lower is better)
Translates to: EISSVLFSVLQGQHPPGQAEVEA*PRALLA
Trigger: GGCCAGCAATGCCCTGGGCAACGCCTCCACCTCAGC...CTGCCCAGGAGGGTGTTGACCCTGGAGGACACTGAAGAGCACTGAGCTGATCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp TCAGAGCAGCCACAGCTGCAGGCCCCCAGTGCTTCCTTCCAAGGGGACCCACCCCTAAGAGCTGGGCTTTaGTGCAGAGTGGCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: SEQPQLQAPSASFQGDPPLRAGL*CRVAWE
Trigger: CTCCCAGGCCACTCTGCACAAAAGCCCAGCTCTTAG...GGGTGGGTCCCCTTGGAAGGAAGCACTGGGGGCCTGCAGCTGTGGCTGCTCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS TCA 90 bp TGTGACAGCACCAGTGTGGCCAGGGGCTCACTGACCACAGAGCAGTaGAGGATGCCCACAAGTCCCGCCTGGGTCTCCAGGAAGGCTGTC +
Preference number: 5 (lower is better)
Translates to: CDSTSVARGSLTTEQ*RMPTSPAWVSRKAV
Trigger: GACAGCCTTCCTGGAGACCCAGGCGGGACTTGTGGGCATCCTTCACTGCTCTGTGGTCAGTGAGCCCCTGGCCACACTGGTGCTGTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS TCA 90 bp CGAGGTCGACTCCTGGAGGGGCTGGCCATCCCGATACCAACGATATaGGGTCCCCTCTGGGACTCCTGTGTGTACCTGGCAGCTCAGGAC +
Preference number: 5 (lower is better)
Translates to: RGRLLEGLAIPIPTI*GPLWDSCVYLAAQD
Trigger: GTCCTGAGCTGCCAGGTACACACAGGAGTCCCAGAGGGGACCTCATATCGTTGGTATCGGGATGGCCAGCCCCTCCAGGAGTCGACCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS TCA 90 bp AGTGGGCATCCAGGCGCTGCTGCCCATCCTGGTACCATGTGTAGGTaGGCTGGGCCGGGTGAGTGGTCCACACAAGGCAGGTCAGGTTCA +
Preference number: 5 (lower is better)
Translates to: SGHPGAAAHPGTMCR*AGPGEWSTQGRSGS
Trigger: TGAACCTGACCTGCCTTGTGTGGACCACTCACCCGGCCCAGCTCACCTACACATGGTACCAGGATGGGCAGCAGCGCCTGGATGCCCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS GCA 90 bp CTGGGCTTGGCAATGATAGGCCCCAGCTTGTGTCAAAGTTATGGCTaGAAAGCGGAGCGTGGCCGAGGTCGACTCCTGGAGGGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: LGLAMIGPSLCQSYG*KAERGRGRLLEGLA
Trigger: GGCCAGCCCCTCCAGGAGTCGACCTCGGCCACGCTCCGCTTTGCAGCCATAACTTTGACACAAGCTGGGGCCTATCATTGCCAAGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS GCA 90 bp CTCCTGCAGCCAACGACCGTTGTGGTACCAAGTATAGAGTGTGGGTaGGTGGGCAGCAGGGTCCGCACAGGTCACTGTGATGGGGGCACC +
Preference number: 5 (lower is better)
Translates to: LLQPTTVVVPSIECG*VGSRVRTGHCDGGT
Trigger: GGTGCCCCCATCACAGTGACCTGTGCGGACCCTGCTGCCCACGCACCCACACTCTATACTTGGTACCACAACGGTCGTTGGCTGCAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS GCA 90 bp TCCCTGATGCCAAGCTGTGGACCCCGCTGCTCGTGGCCAGCACCTTaGCATCATGAGATAGGGCCAGCTCAGCAGGTGGCTCACTGTCCA +
Preference number: 5 (lower is better)
Translates to: SLMPSCGPRCSWPAP*HHEIGPAQQVAHCP
Trigger: TGGACAGTGAGCCACCTGCTGAGCTGGCCCTATCTCATGATGGCAAGGTGCTGGCCACGAGCAGCGGGGTCCACAGCTTGGCATCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS CCA 90 bp GCTTTGGACGGTCCGGGGGATAGAGTACACTCAGGAGCACGGGAGTaGAGAGCTGGGCACCAGCCTCAGTCAGGATGCGGCAGGCGTAAA +
Preference number: 5 (lower is better)
Translates to: ALDGPGDRVHSGARE*RAGHQPQSGCGRRK
Trigger: TTTACGCCTGCCGCATCCTGACTGAGGCTGGTGCCCAGCTCTCCACTCCCGTGCTCCTGAGTGTACTCTATCCCCCGGACCGTCCAAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 90 bp GGGCCTGGGCTTGGCAATGATAGGCCCCAGCTTGTGTCAAAGTTATaGCTGCAAAGCGGAGCGTGGCCGAGGTCGACTCCTGGAGGGGCT +
Preference number: 5 (lower is better)
Translates to: GPGLGNDRPQLVSKL*LQSGAWPRSTPGGA
Trigger: AGCCCCTCCAGGAGTCGACCTCGGCCACGCTCCGCTTTGCAGCCATAACTTTGACACAAGCTGGGGCCTATCATTGCCAAGCCCAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp GAGGGTGCGGCCTCGGCTACACAAAGTTCACCCGCCCCCAACTGCCTCCCAGCGTCACTGGGTGCCTCATaGGGTGTGTTGCAGACTAGT +
Preference number: 5 (lower is better)
Translates to: EGAASATQSSPAPNCLPASLGAS*GVLQTS
Trigger: ACTAGTCTGCAACACACCCAATGAGGCACCCAGTGA...CGCTGGGAGGCAGTTGGGGGCGGGTGAACTTTGTGTAGCCGAGGCCGCACCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp TGCATGGCTGGAAGTGTGACTTGGAGCCCTGGCCTACCAGGTGAATCAGCTGCAAGCTCCAGGGACGTGTaGGCCTGGCCCAGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: CMAGSVTWSPGLPGESAASSRDV*AWPRGL
Trigger: CAGCCCTCTGGGCCAGGCCAACACGTCCCTGGAGCT...TGCAGCTGATTCACCTGGTAGGCCAGGGCTCCAAGTCACACTTCCAGCCATGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS TCA 90 bp GAGGGCAGGCAACACCACTGGTCAGCCCAGGGGTGGGGCACAGGTTaGGGTCTCACATGTGGCTGCATCAGGATCAATGAGCTGCGTGGT +
Preference number: 5 (lower is better)
Translates to: EGRQHHWSAQGWGTG*GLTCGCIRINELRG
Trigger: ACCACGCAGCTCATTGATCCTGATGCAGCCACATGTGAGACCTCAACCTGTGCCCCACCCCTGGGCTGACCAGTGGTGTTGCCTGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS GCA 90 bp AAGCTTGGGCAAGAAGCCCATAGCAGGTTCTTGTGCTGCTCCTGTTaGCTAAGAGGGTGGTGCGCACTGCGCTGGCTGGGCTCACAGGGG +
Preference number: 5 (lower is better)
Translates to: KLGQEAHSRFLCCSC*LRGWCALRWLGSQG
Trigger: CCCCTGTGAGCCCAGCCAGCGCAGTGCGCACCACCCTCTTAGGCAACAGGAGCAGCACAAGAACCTGCTATGGGCTTCTTGCCCAAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS GCA 90 bp CAGGAGGAGAAGCTTGGGCAAGAAGCCCATAGCAGGTTCTTGTGCTaGTCCTGTTGCCTAAGAGGGTGGTGCGCACTGCGCTGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: QEEKLGQEAHSRFLC*SCCLRGWCALRWLG
Trigger: GCCCAGCCAGCGCAGTGCGCACCACCCTCTTAGGCAACAGGAGCAGCACAAGAACCTGCTATGGGCTTCTTGCCCAAGCTTCTCCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 90 bp GATAGGCCCCAGCTTGTGTCAAAGTTATGGCTGCAAAGCGGAGCGTaGCCGAGGTCGACTCCTGGAGGGGCTGGCCATCCCGATACCAAC +
Preference number: 5 (lower is better)
Translates to: DRPQLVSKLWLQSGA*PRSTPGGAGHPDTN
Trigger: GTTGGTATCGGGATGGCCAGCCCCTCCAGGAGTCGACCTCGGCCACGCTCCGCTTTGCAGCCATAACTTTGACACAAGCTGGGGCCTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 90 bp GCTCAGCAGGTGGCTCACTGTCCACAGTGCACTGTATCACAGCCATaGATCTGGCCCTGGAGTCCCGGAAGGAGGACAGGACAGCGTCCT +
Preference number: 5 (lower is better)
Translates to: AQQVAHCPQCTVSQP*IWPWSPGRRTGQRP
Trigger: AGGACGCTGTCCTGTCCTCCTTCCGGGACTCCAGGGCCAGATCCATGGCTGTGATACAGTGCACTGTGGACAGTGAGCCACCTGCTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS CCA 90 bp GCTCACTGTCCACAGTGCACTGTATCACAGCCATGGATCTGGCCCTaGAGTCCCGGAAGGAGGACAGGACAGCGTCCTGAGGGGCATAGA +
Preference number: 5 (lower is better)
Translates to: AHCPQCTVSQPWIWP*SPGRRTGQRPEGHR
Trigger: TCTATGCCCCTCAGGACGCTGTCCTGTCCTCCTTCCGGGACTCCAGGGCCAGATCCATGGCTGTGATACAGTGCACTGTGGACAGTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS CCA 90 bp AGCCCAGGACATTTGAGGCAGAACAGATGTATTCCCCTTGGTCGCTaGGCCTCAGCGCCTCGATGTCCACCCTCAGGGCATTGGGGGAAG +
Preference number: 5 (lower is better)
Translates to: SPGHLRQNRCIPLGR*ASAPRCPPSGHWGK
Trigger: CTTCCCCCAATGCCCTGAGGGTGGACATCGAGGCGCTGAGGCCCAGCGACCAAGGGGAATACATCTGTTCTGCCTCAAATGTCCTGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS CCA 90 bp GAGGCAGAGCCCAGGACATTTGAGGCAGAACAGATGTATTCCCCTTaGTCGCTGGGCCTCAGCGCCTCGATGTCCACCCTCAGGGCATTG +
Preference number: 5 (lower is better)
Translates to: EAEPRTFEAEQMYSP*SLGLSASMSTLRAL
Trigger: CAATGCCCTGAGGGTGGACATCGAGGCGCTGAGGCCCAGCGACCAAGGGGAATACATCTGTTCTGCCTCAAATGTCCTGGGCTCTGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CAA 90 bp GCGTCCACCATGGGCATGGGTGTGCTTCTACCTCCACTCTTCCTTCTTCTGGCTGCGTTGCCCAGGGCATaGCTGGCCTCACAGAGGTAC +
Preference number: 5 (lower is better)
Translates to: ASTMGMGVLLPPLFLLLAALPRA*LASQRY
Trigger: GTACCTCTGTGAGGCCAGCAATGCCCTGGGCAACGC...AGCCAGAAGAAGGAAGAGTGGAGGTAGAAGCACACCCATGCCCATGGTGGACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp CTGGCCCTCAGTAGATGGGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCTCCACCCTCAGGGCATaGGGGGAAGCCAGGACATGG +
Preference number: 5 (lower is better)
Translates to: LALSRWALRQNMACWWHSSTLRA*GEARTW
Trigger: CCATGTCCTGGCTTCCCCCAATGCCCTGAGGGTGGA...GGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACTGAGGGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS GCA 90 bp CATCATGAGATAGGGCCAGCTCAGCAGGTGGCTCACTGTCCACAGTaGACTGTATCACAGCCATGGATCTGGCCCTGGAGTCCCGGAAGG +
Preference number: 5 (lower is better)
Translates to: HHEIGPAQQVAHCPQ*TVSQPWIWPWSPGR
Trigger: CCTTCCGGGACTCCAGGGCCAGATCCATGGCTGTGATACAGTGCACTGTGGACAGTGAGCCACCTGCTGAGCTGGCCCTATCTCATGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS CCA 90 bp TCGCTCCAGGCTGCCTGGGGCAGGTGCAGCACACCAGTCTTGGTTTaGAGGCGTACCCCATCCTTGAGCCACTTAATGGAACTGACTGCA +
Preference number: 5 (lower is better)
Translates to: SLQAAWGRCSTPVLV*RRTPSLSHLMELTA
Trigger: TGCAGTCAGTTCCATTAAGTGGCTCAAGGATGGGGTACGCCTCCAAACCAAGACTGGTGTGCTGCACCTGCCCCAGGCAGCCTGGAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp TATTGGGAGGACATTCTGGACGGGCTCCCAGCAAGAGTCTGGCAATGGAGCATGAGGAGACGGGCGGCATaGGCATGGAAGTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: YWEDILDGLPARVWQWSMRRRAA*AWKSRV
Trigger: CACCCTGGACTTCCATGCCAATGCCGCCCGTCTCCT...CATGCTCCATTGCCAGACTCTTGCTGGGAGCCCGTCCAGAATGTCCTCCCAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp CTGGCCCTCAGTAGATGGGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCACAGTGGCCTGGCCATaGAAGGTGGCTGAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: LALSRWALRQNMACWWHSTVAWP*KVAEVE
Trigger: CTCCACCTCAGCCACCTTCAATGGCCAGGCCACTGT...GGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACTGAGGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp GGTCAGCCCAGGGGTGGGGCACAGGTTGAGGTCTCACATGTGGCTGCATCAGGAAGGGCAGGGCTTCCTTaGAGGGAGAAATGGAGAGAA +
Preference number: 5 (lower is better)
Translates to: GQPRGGAQVEVSHVAASGRAGLP*REKWRE
Trigger: TTCTCTCCATTTCTCCCTCAAAGGAAGCCCTGCCCT...TCCTGATGCAGCCACATGTGAGACCTCAACCTGTGCCCCACCCCTGGGCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS GCA 90 bp TGCCAGCAGCTTCCCGGCTCACGTTGCAAGTCAAGTTGGCTTCTGTaGCCTCCTGAAGTGTGTGTGATGGTGCAATGGCCAGGACAGTGG +
Preference number: 5 (lower is better)
Translates to: CQQLPGSRCKSSWLL*PPEVCVMVQWPGQW
Trigger: CCACTGTCCTGGCCATTGCACCATCACACACACTTCAGGAGGGCACAGAAGCCAACTTGACTTGCAACGTGAGCCGGGAAGCTGCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp GAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCTGGGCAGAGTCCAGGGTGGAGGTaGCATTTCCAAGGGAGTTGG +
Preference number: 5 (lower is better)
Translates to: EISSVLFSVLQGQHPPGQSPGWR*HFQGSW
Trigger: CCAACTCCCTTGGAAATGCAACCTCCACCCTGGACT...CTGCCCAGGAGGGTGTTGACCCTGGAGGACACTGAAGAGCACTGAGCTGATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp GGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGAGGGGCATAGAGGACTaGCAGGGCAGCAGGACGGGA +
Preference number: 5 (lower is better)
Translates to: GLLVAFPTMSKVSGMSSQRGIED*QGSRTG
Trigger: TCCCGTCCTGCTGCCCTGCAAGTCCTCTATGCCCCT...CTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS TCA 90 bp CACCACGCGTGCACCTTCTACCTGCAACCGCCCGATGGTGCTGATTaGGCCCAGCAAGTTTTGGGCTGTGCAAACATAGGTGTCATCACC +
Preference number: 5 (lower is better)
Translates to: HHACTFYLQPPDGAD*AQQVLGCANIGVIT
Trigger: GGTGATGACACCTATGTTTGCACAGCCCAAAACTTGCTGGGCTCAATCAGCACCATCGGGCGGTTGCAGGTAGAAGGTGCACGCGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS TCA 90 bp CTGCCACCACGCGTGCACCTTCTACCTGCAACCGCCCGATGGTGCTaGTTGAGCCCAGCAAGTTTTGGGCTGTGCAAACATAGGTGTCAT +
Preference number: 5 (lower is better)
Translates to: LPPRVHLLPATARWC*LSPASFGLCKHRCH
Trigger: ATGACACCTATGTTTGCACAGCCCAAAACTTGCTGGGCTCAATCAGCACCATCGGGCGGTTGCAGGTAGAAGGTGCACGCGTGGTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS GCA 90 bp GGTTTGGAGGCGTACCCCATCCTTGAGCCACTTAATGGAACTGACTaGAGGGTAGCTGCTGTTCACCTGGCAGGTGAGTGTGACCAGCTC +
Preference number: 5 (lower is better)
Translates to: GLEAYPILEPLNGTD*RVAAVHLAGECDQL
Trigger: GAGCTGGTCACACTCACCTGCCAGGTGAACAGCAGCTACCCTGCAGTCAGTTCCATTAAGTGGCTCAAGGATGGGGTACGCCTCCAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp GGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGCTTGTGCTGCTCCTGTaGCCTAAGAGGGTGGTGCGC +
Preference number: 5 (lower is better)
Translates to: GLLVAFPTMSKVSGMSSQLVLLL*PKRVVR
Trigger: GCGCACCACCCTCTTAGGCAACAGGAGCAGCACAAG...CTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp GAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGGGTCAACACCCTCCTGGGCAGACATCTGACCAGCGGTaGACCTCACTGATCTCGAAG +
Preference number: 5 (lower is better)
Translates to: EISSVLFSVLQGQHPPGQTSDQR*TSLISK
Trigger: CTTCGAGATCAGTGAGGTCAACCGCTGGTCAGATGT...CTGCCCAGGAGGGTGTTGACCCTGGAGGACACTGAAGAGCACTGAGCTGATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp CTGGCCCTCAGTAGATGGGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCGGGATGAGCTCACAGTaGGGAGTCCTTTGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: LALSRWALRQNMACWWHSGMSSQ*GVLWKS
Trigger: GGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCC...GGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACTGAGGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CAA 90 bp TGCATGGCTGGAAGTGTGACTTGGAGCCCTGGCCTACCAGGTGAATCAGCTGCAGGGATGAGCTCACAGTaGGGAGTCCTTTGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: CMAGSVTWSPGLPGESAAGMSSQ*GVLWKS
Trigger: GGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCC...TGCAGCTGATTCACCTGGTAGGCCAGGGCTCCAAGTCACACTTCCAGCCATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS GCA 90 bp TGTACCAGCTGTAGCGGAGATCACTGGGTGCCTCATTGGGTGTGTTaGAGACTAGTGTCACTGTCTGGTTCTCCAGGATGGGACCTGCTG +
Preference number: 5 (lower is better)
Translates to: CTSCSGDHWVPHWVC*RLVSLSGSPGWDLL
Trigger: CAGCAGGTCCCATCCTGGAGAACCAGACAGTGACACTAGTCTGCAACACACCCAATGAGGCACCCAGTGATCTCCGCTACAGCTGGTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS GCA 90 bp GCGTGGTCTCTTTCTGAAAAGCCATCTCCACCGAATTCTCGCCCATaGTCTGCTTACAAACACGCCTCCTTCTCCAGGTGTAGCAGGCCC +
Preference number: 5 (lower is better)
Translates to: AWSLSEKPSPPNSRP*SAYKHASFSRCSRP
Trigger: GGGCCTGCTACACCTGGAGAAGGAGGCGTGTTTGTAAGCAGAGCATGGGCGAGAATTCGGTGGAGATGGCTTTTCAGAAAGAGACCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS GCA 90 bp AGGGTGCCCCGAGCAATCAGTTTAGAGTCGACAGGCAAATCATGCTaGAGCAGGAGGGATACAGGGAAGGAAGCCTTTGGGCCTAAGAGC +
Preference number: 5 (lower is better)
Translates to: RVPRAISLESTGKSC*SRRDTGKEAFGPKS
Trigger: GCTCTTAGGCCCAAAGGCTTCCTTCCCTGTATCCCTCCTGCTGCAGCATGATTTGCCTGTCGACTCTAAACTGATTGCTCGGGGCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS CCA 90 bp TGGCATGGAAGTCCAGGGTGGAGGTTGCATTTCCAAGGGAGTTGGTaGCTGAGCACTTGTACTCCCCACTGTCAGTTTCCTCCAGGTCTC +
Preference number: 5 (lower is better)
Translates to: WHGSPGWRLHFQGSW*LSTCTPHCQFPPGL
Trigger: GAGACCTGGAGGAAACTGACAGTGGGGAGTACAAGTGCTCAGCCACCAACTCCCTTGGAAATGCAACCTCCACCCTGGACTTCCATGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 90 bp GGACCTGGAAGAAGAGTGAGGTGTTGGATGATCCAAGAACATTTGTaGCCTCACAGCGGTAGCTGCCAGAGTCCCCAAGGCCCAGTTCTC +
Preference number: 5 (lower is better)
Translates to: GPGRRVRCWMIQEHL*PHSGSCQSPQGPVL
Trigger: GAGAACTGGGCCTTGGGGACTCTGGCAGCTACCGCTGTGAGGCCACAAATGTTCTTGGATCATCCAACACCTCACTCTTCTTCCAGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp TGCTGCAATCCAACCAAAGTCCAGGGTGACTTTCGAGGAGAAGGATGTGAAAGGGTGAGAGGCGGGTGGTaGACTACCACGCTGACAGGG +
Preference number: 5 (lower is better)
Translates to: CCNPTKVQGDFRGEGCERVRGGW*TTTLTG
Trigger: CCCTGTCAGCGTGGTAGTCAACCACCCGCCTCTCAC...CCTTTCACATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTTGGATTGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp AGGAGATCCAGAGAAGAGAGAGCGAGATCAGCTCAGTGCTCTTCAGTGTCCTCCAGCAAGTTGGGGGCTTaGGTGACCTTCATGCGTGGG +
Preference number: 5 (lower is better)
Translates to: RRSREERARSAQCSSVSSSKLGA*VTFMRG
Trigger: CCCACGCATGAAGGTCACCAAAGCCCCCAACTTGCT...GGAGGACACTGAAGAGCACTGAGCTGATCTCGCTCTCTCTTCTCTGGATCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp CACTCAAGAGCTCTCTCCTGTTGGTCCCTGATTCGCAGGGGCACGTCATTCCTTGCTTCCCGGCTCACGTaGCAAGTCAAGTTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: HSRALSCWSLIRRGTSFLASRLT*QVKLAS
Trigger: AGAAGCCAACTTGACTTGCAACGTGAGCCGGGAAGC...AAGGAATGACGTGCCCCTGCGAATCAGGGACCAACAGGAGAGAGCTCTTGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp AAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAAGCTCCAGGGACGTGTaGGCCTGGCCCAGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: KSLRDELTVGSPLEVQFQSSRDV*AWPRGL
Trigger: CAGCCCTCTGGGCCAGGCCAACACGTCCCTGGAGCT...TTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CAA 90 bp GTCAGAACATACGTGTCTTGGAAATGGAGGGGATGCTGCCAAGTCCAGAAAGTCTCCACCCTCAGGGCATaGGGGGAAGCCAGGACATGG +
Preference number: 5 (lower is better)
Translates to: VRTYVSWKWRGCCQVQKVSTLRA*GEARTW
Trigger: CCATGTCCTGGCTTCCCCCAATGCCCTGAGGGTGGA...GACTTTCTGGACTTGGCAGCATCCCCTCCATTTCCAAGACACGTATGTTCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CAA 90 bp CTGGCCCTCAGTAGATGGGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCATCTGCCCGTGTGTGTaGAATGGATACCTGCGTGGT +
Preference number: 5 (lower is better)
Translates to: LALSRWALRQNMACWWHSICPCV*NGYLRG
Trigger: ACCACGCAGGTATCCATTCAACACACACGGGCAGAT...GGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACTGAGGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CAA 90 bp ACTCAACACTGCCTCATTCACATTCATAGGCTGGAGTCATCACAGATTCTGGCCCTCCCCAACCTCCCCTaGGTCCCAGGCACCATCCTC +
Preference number: 5 (lower is better)
Translates to: TQHCLIHIHRLESSQILALPNLP*VPGTIL
Trigger: GAGGATGGTGCCTGGGACCAAGGGGAGGTTGGGGAG...GGCCAGAATCTGTGATGACTCCAGCCTATGAATGTGAATGAGGCAGTGTTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS GCA 90 bp ACAAGGGTGCCCCGAGCAATCAGTTTAGAGTCGACAGGCAAATCATaGTGCAGCAGGAGGGATACAGGGAAGGAAGCCTTTGGGCCTAAG +
Preference number: 5 (lower is better)
Translates to: TRVPRAISLESTGKS*CSRRDTGKEAFGPK
Trigger: CTTAGGCCCAAAGGCTTCCTTCCCTGTATCCCTCCTGCTGCAGCATGATTTGCCTGTCGACTCTAAACTGATTGCTCGGGGCACCCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS CCA 90 bp CCTCCAGCAGGACATGGTTCTTGTACCAGCTGTAGCGGAGATCACTaGGTGCCTCATTGGGTGTGTTGCAGACTAGTGTCACTGTCTGGT +
Preference number: 5 (lower is better)
Translates to: PPAGHGSCTSCSGDH*VPHWVCCRLVSLSG
Trigger: ACCAGACAGTGACACTAGTCTGCAACACACCCAATGAGGCACCCAGTGATCTCCGCTACAGCTGGTACAAGAACCATGTCCTGCTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 90 bp CATTGGCATGGAAGTCCAGGGTGGAGGTTGCATTTCCAAGGGAGTTaGTGGCTGAGCACTTGTACTCCCCACTGTCAGTTTCCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: HWHGSPGWRLHFQGS*WLSTCTPHCQFPPG
Trigger: ACCTGGAGGAAACTGACAGTGGGGAGTACAAGTGCTCAGCCACCAACTCCCTTGGAAATGCAACCTCCACCCTGGACTTCCATGCCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp GACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATTCCTTCAGCAGCAGGTaGCACACCCTGTGCTCGGGG +
Preference number: 5 (lower is better)
Translates to: DKTWPAGGIPNNVKSLRDSFSSR*HTLCSG
Trigger: CCCCGAGCACAGGGTGTGCAACCTGCTGCTGAAGGA...ATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp CTTGGTAACTCATTCTCTTTAACAGCCCGACACAGGGTCTCCAGGAAAAGGACAGGAGGGCTGACAGCTTaGGACGGTCCGGGGGATAGA +
Preference number: 5 (lower is better)
Translates to: LGNSFSLTARHRVSRKRTGGLTA*DGPGDR
Trigger: TCTATCCCCCGGACCGTCCAAAGCTGTCAGCCCTCC...TGTCCTTTTCCTGGAGACCCTGTGTCGGGCTGTTAAAGAGAATGAGTTACCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp CACTCAAGAGCTCTCTCCTGTTGGTCCCTGATTCGCAGGGGCACGTCATTCCTTTCTAACTTCAGGGAGTaGGCCTCAGCTTTAGCCTGG +
Preference number: 5 (lower is better)
Translates to: HSRALSCWSLIRRGTSFLSNFRE*ASALAW
Trigger: CCAGGCTAAAGCTGAGGCCAACTCCCTGAAGTTAGA...AAGGAATGACGTGCCCCTGCGAATCAGGGACCAACAGGAGAGAGCTCTTGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp CTTGGTAACTCATTCTCTTTAACAGCCCGACACAGGGTCTCCAGGAAAAGGACAAGGGGCATAGAGGACTaGCAGGGCAGCAGGACGGGA +
Preference number: 5 (lower is better)
Translates to: LGNSFSLTARHRVSRKRTRGIED*QGSRTG
Trigger: TCCCGTCCTGCTGCCCTGCAAGTCCTCTATGCCCCT...TGTCCTTTTCCTGGAGACCCTGTGTCGGGCTGTTAAAGAGAATGAGTTACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CAA 90 bp TGCTGCAATCCAACCAAAGTCCAGGGTGACTTTCGAGGAGAAGGATGTGAAAGGGTGGTACATCCCAGCTaGAGCACGAGCCACGTGGGT +
Preference number: 5 (lower is better)
Translates to: CCNPTKVQGDFRGEGCERVVHPS*STSHVG
Trigger: ACCCACGTGGCTCGTGCTCAAGCTGGGATGTACCAC...CCTTTCACATCCTTCTCCTCGAAAGTCACCCTGGACTTTGGTTGGATTGCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CAA 90 bp GCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTGGGGTGGGGCACAGGTaGAGGTCTCACATGTGGCTG +
Preference number: 5 (lower is better)
Translates to: AFPTMSKVSGMSSQLGVLGVGHR*RSHMWL
Trigger: CAGCCACATGTGAGACCTCAACCTGTGCCCCACCCC...AAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CAA 90 bp GACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATGGGGTGGGGCACAGGTaGAGGTCTCACATGTGGCTG +
Preference number: 5 (lower is better)
Translates to: DKTWPAGGIPNNVKSLRDGVGHR*RSHMWL
Trigger: CAGCCACATGTGAGACCTCAACCTGTGCCCCACCCC...ATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CAA 90 bp CAACATCTGTGTCTGCCCTCCACTCTTGTAAGGGCCAGTAAGGTAGTACCCAGTAAGAGCTCTCTCCTGTaGGTCCCTGATTCGCAGGGG +
Preference number: 5 (lower is better)
Translates to: QHLCLPSTLVRASKVVPSKSSLL*VPDSQG
Trigger: CCCCTGCGAATCAGGGACCAACAGGAGAGAGCTCTT...ACTGGGTACTACCTTACTGGCCCTTACAAGAGTGGAGGGCAGACACAGATGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS CCA 90 bp CATGGTTCTTGTACCAGCTGTAGCGGAGATCACTGGGTGCCTCATTaGGTGTGTTGCAGACTAGTGTCACTGTCTGGTTCTCCAGGATGG +
Preference number: 5 (lower is better)
Translates to: HGSCTSCSGDHWVPH*VCCRLVSLSGSPGW
Trigger: CCATCCTGGAGAACCAGACAGTGACACTAGTCTGCAACACACCCAATGAGGCACCCAGTGATCTCCGCTACAGCTGGTACAAGAACCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp AGTAGATGGGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTGCCAGGAGGAGAAGCTaGGGCAAGAAGCCCATAGCA +
Preference number: 5 (lower is better)
Translates to: SRWALRQNMACWWHSQQCARRRS*GKKPIA
Trigger: TGCTATGGGCTTCTTGCCCAAGCTTCTCCTCCTGGC...ACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCCCATCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp TATTGGGAGGACATTCTGGACGGGCTCCCAGCAAGAGTCTGGCAATGGAGCATGTCAAACTTCTGGCTGTaGAAGGTGACAGAGCGAGCA +
Preference number: 5 (lower is better)
Translates to: YWEDILDGLPARVWQWSMSNFWL*KVTERA
Trigger: TGCTCGCTCTGTCACCTTCAACAGCCAGAAGTTTGA...CATGCTCCATTGCCAGACTCTTGCTGGGAGCCCGTCCAGAATGTCCTCCCAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp AAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAACATGCAAAGGTGGAGTaGCCCACAGGCCCAGGGCCA +
Preference number: 5 (lower is better)
Translates to: KVSGMSSQLGVLWKSNSKHAKVE*PTGPGP
Trigger: TGGCCCTGGGCCTGTGGGCAACTCCACCTTTGCATG...TTTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CAA 90 bp GACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATGTGGTACATCCCAGCTaGAGCACGAGCCACGTGGGT +
Preference number: 5 (lower is better)
Translates to: DKTWPAGGIPNNVKSLRDVVHPS*STSHVG
Trigger: ACCCACGTGGCTCGTGCTCAAGCTGGGATGTACCAC...ATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CAA 90 bp CTTGGTAACTCATTCTCTTTAACAGCCCGACACAGGGTCTCCAGGAAAAGGACAACAGATGTATTCCCCTaGGTCGCTGGGCCTCAGCGC +
Preference number: 5 (lower is better)
Translates to: LGNSFSLTARHRVSRKRTTDVFP*VAGPQR
Trigger: GCGCTGAGGCCCAGCGACCAAGGGGAATACATCTGT...TGTCCTTTTCCTGGAGACCCTGTGTCGGGCTGTTAAAGAGAATGAGTTACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CAA 90 bp CTTCTTGGTAACTCATTCTCTTTAACAGCCCGACACAGGGTCTCCAGGAAAAGGAGGACCTGGGGGAATTaGGGGAGAAGACGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: LLGNSFSLTARHRVSRKRRTWGN*GRRRGG
Trigger: CCCACCTCGTCTTCTCCCCAAATTCCCCCAGGTCCT...CCTTTTCCTGGAGACCCTGTGTCGGGCTGTTAAAGAGAATGAGTTACCAAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CAA 90 bp CTTCTTGGTAACTCATTCTCTTTAACAGCCCGACACAGGGTCTCCAGGAAAAGGTCCACACGCAGCAAGTaGGGGGCTTTGGTGACCTTC +
Preference number: 5 (lower is better)
Translates to: LLGNSFSLTARHRVSRKRSTRSK*GALVTF
Trigger: GAAGGTCACCAAAGCCCCCAACTTGCTGCGTGTGGA...CCTTTTCCTGGAGACCCTGTGTCGGGCTGTTAAAGAGAATGAGTTACCAAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp AAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAAACAGATGTATTCCCCTaGGTCGCTGGGCCTCAGCGC +
Preference number: 5 (lower is better)
Translates to: KVSGMSSQLGVLWKSNSKTDVFP*VAGPQR
Trigger: GCGCTGAGGCCCAGCGACCAAGGGGAATACATCTGT...TTTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CAA 90 bp GACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATGCCCATAGCAGGTTCTaGTGCTGCTCCTGTTGCCTA +
Preference number: 5 (lower is better)
Translates to: DKTWPAGGIPNNVKSLRDAHSRF*CCSCCL
Trigger: TAGGCAACAGGAGCAGCACAAGAACCTGCTATGGGC...ATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp GGCACTGAGACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCGCCTCATTGGGTGTGTaGCAGACTAGTGTCACTGTC +
Preference number: 5 (lower is better)
Translates to: GTETKHGLLVAFPTMSKVASLGV*QTSVTV
Trigger: GACAGTGACACTAGTCTGCAACACACCCAATGAGGC...GACTTTTGACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTCTCAGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp TCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGCAGTCCAGGCGCAGGGAGTaGGGACCAGAGGTACCACTG +
Preference number: 5 (lower is better)
Translates to: SSGLKIKTTFPSLPCSLQSRRRE*GPEVPL
Trigger: CAGTGGTACCTCTGGTCCCAACTCCCTGCGCCTGGA...CTGCAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp TCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGCAGTCCCTGACTGTGACGTaGGGCAGGGGGATGGAGTGG +
Preference number: 5 (lower is better)
Translates to: SSGLKIKTTFPSLPCSLQSLTVT*GRGMEW
Trigger: CCACTCCATCCCCCTGCCCAACGTCACAGTCAGGGA...CTGCAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp AAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAGTCTCCAGATGCCAGTaGGCACTGTGGGTTAGCTGG +
Preference number: 5 (lower is better)
Translates to: KSLRDELTVGSPLEVQFQVSRCQ*ALWVSW
Trigger: CCAGCTAACCCACAGTGCCAACTGGCATCTGGAGAC...TTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CAA 90 bp GACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATAGGATCTTCACACCCTaGGGGGCATACTTCACTTGG +
Preference number: 5 (lower is better)
Translates to: DKTWPAGGIPNNVKSLRDRIFTP*GAYFTW
Trigger: CCAAGTGAAGTATGCCCCCAAGGGTGTGAAGATCCT...ATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp ACTCAACACTGCCTCATTCACATTCATAGGCTGGAGTCATCACAGATTCTGGCCAGGCGTACCCCATCCTaGAGCCACTTAATGGAACTG +
Preference number: 5 (lower is better)
Translates to: TQHCLIHIHRLESSQILARRTPS*SHLMEL
Trigger: CAGTTCCATTAAGTGGCTCAAGGATGGGGTACGCCT...GGCCAGAATCTGTGATGACTCCAGCCTATGAATGTGAATGAGGCAGTGTTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp GCATTCCCAACAATGTCAAAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTGCATTTCCAAGGGAGTaGGTGGCTGAGCACTTGTAC +
Preference number: 5 (lower is better)
Translates to: AFPTMSKVSGMSSQLGVLAFPRE*VAEHLY
Trigger: GTACAAGTGCTCAGCCACCAACTCCCTTGGAAATGC...AAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTTTGACATTGTTGGGAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp GCGTCCACCATGGGCATGGGTGTGCTTCTACCTCCACTCTTCCTTCTTCTGGCTAAGAAGAGTGAGGTGTaGGATGATCCAAGAACATTT +
Preference number: 5 (lower is better)
Translates to: ASTMGMGVLLPPLFLLLAKKSEV*DDPRTF
Trigger: AAATGTTCTTGGATCATCCAACACCTCACTCTTCTT...AGCCAGAAGAAGGAAGAGTGGAGGTAGAAGCACACCCATGCCCATGGTGGACGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp GACAAAACATGGCCTGCTGGTGGCATTCCCAACAATGTCAAAAGTCTCAGGGATGAAGGGATTTCCAATTaGGAGGGGCAGTCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: DKTWPAGGIPNNVKSLRDEGISN*EGQSGK
Trigger: CTTCCCAGACTGCCCCTCCAAATTGGAAATCCCTTC...ATCCCTGAGACTTTTGACATTGTTGGGAATGCCACCAGCAGGCCATGTTTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CAA 90 bp TCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGCAGTGCAGCACACCAGTCTaGGTTTGGAGGCGTACCCCA +
Preference number: 5 (lower is better)
Translates to: SSGLKIKTTFPSLPCSLQCSTPV*VWRRTP
Trigger: TGGGGTACGCCTCCAAACCAAGACTGGTGTGCTGCA...CTGCAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp ATTCCAAATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTCCAGACGCAGTGTGTaGGGGGCCACAGCCACATGC +
Preference number: 5 (lower is better)
Translates to: IPNVLWTQNKNYISQSPLSRRSV*GATATC
Trigger: GCATGTGGCTGTGGCCCCCAACACACTGCGTCTGGA...CAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACATTTGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp TCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGCAGAAGAGCTCTCTCCTGTaGGTCCCTGATTCGCAGGGG +
Preference number: 5 (lower is better)
Translates to: SSGLKIKTTFPSLPCSLQKSSLL*VPDSQG
Trigger: CCCCTGCGAATCAGGGACCAACAGGAGAGAGCTCTT...CTGCAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CAA 90 bp TCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGCAGGGGGGCATACTTCACTaGGAGGTGAATCTCGCTCTG +
Preference number: 5 (lower is better)
Translates to: SSGLKIKTTFPSLPCSLQGGILH*EVNLAL
Trigger: CAGAGCGAGATTCACCTCCAAGTGAAGTATGCCCCC...CTGCAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp AAAGTCTCAGGGATGAGCTCACAGTTGGGAGTCCTTTGGAAGTCCAATTCCAAAATGATAGGCCCCAGCTaGTGTCAAAGTTATGGCTGC +
Preference number: 5 (lower is better)
Translates to: KVSGMSSQLGVLWKSNSKMIGPS*CQSYGC
Trigger: GCAGCCATAACTTTGACACAAGCTGGGGCCTATCAT...TTTGGAATTGGACTTCCAAAGGACTCCCAACTGTGAGCTCATCCCTGAGACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp TCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGCAGAGGGCAGGGCTTCCTTaGAGGGAGAAATGGAGAGAA +
Preference number: 5 (lower is better)
Translates to: SSGLKIKTTFPSLPCSLQRAGLP*REKWRE
Trigger: TTCTCTCCATTTCTCCCTCAAAGGAAGCCCTGCCCT...CTGCAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CAA 90 bp CTTCTTGGTAACTCATTCTCTTTAACAGCCCGACACAGGGTCTCCAGGAAAAGGACAGTTGGGAGTCCTTaGGAAGTCCAATTCCAAATG +
Preference number: 5 (lower is better)
Translates to: LLGNSFSLTARHRVSRKRTVGSP*EVQFQM
Trigger: CATTTGGAATTGGACTTCCAAAGGACTCCCAACTGT...CCTTTTCCTGGAGACCCTGTGTCGGGCTGTTAAAGAGAATGAGTTACCAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS-3UTR CAA 90 bp TCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGCAGCAGAACATACGTGTCTaGGAAATGGAGGGGATGCTG +
Preference number: 5 (lower is better)
Translates to: SSGLKIKTTFPSLPCSLQQNIRV*EMEGML
Trigger: CAGCATCCCCTCCATTTCCAAGACACGTATGTTCTG...CTGCAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS-3UTR CAA 90 bp ATTCCAAATGTCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTTGGTGGCTGAGCACTaGTACTCCCCACTGTCAGTT +
Preference number: 5 (lower is better)
Translates to: IPNVLWTQNKNYISQSPLLVAEH*YSPLSV
Trigger: AACTGACAGTGGGGAGTACAAGTGCTCAGCCACCAA...CAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGACATTTGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS-3UTR CAA 90 bp TCCTCTGGACTCAAAATAAAAACTACATTTCCCAGTCTCCCTTGTAGCTTGCAGACAGTTGGGAGTCCTTaGGAAGTCCAATTCCAAATG +
Preference number: 5 (lower is better)
Translates to: SSGLKIKTTFPSLPCSLQTVGSP*EVQFQM
Trigger: CATTTGGAATTGGACTTCCAAAGGACTCCCAACTGT...CTGCAAGCTACAAGGGAGACTGGGAAATGTAGTTTTTATTTTGAGTCCAGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS CCA 72 bp ACTCGGTGCGGCCGCGGAAGCGGGCCTCCACCAGCTTaGGGTCCGCCGAGTGGCTCACCACCTGCCGCTGGC +
Preference number: 6 (lower is better)
Translates to: TRCGRGSGPPPA*GPPSGSPPAAG
Trigger: GCCAGCGGCAGGTGGTGAGCCACTCGGCGGACCCCAAGCTGGTGGAGGCCCGCTTCCGCGGCCGCACCGAGT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CAA 72 bp AACTCGGTGCGGCCGCGGAAGCGGGCCTCCACCAGCTaGGGGTCCGCCGAGTGGCTCACCACCTGCCGCTGG +
Preference number: 6 (lower is better)
Translates to: NSVRPRKRASTS*GSAEWLTTCRW
Trigger: CCAGCGGCAGGTGGTGAGCCACTCGGCGGACCCCAAGCTGGTGGAGGCCCGCTTCCGCGGCCGCACCGAGTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS GCA 72 bp CAGGGCAGCGCCCTCAGGCACGTCCAGGCCAGGCTCTaGCACCACGCGTGCACCTTCTACCTGCAACCGCCC +
Preference number: 6 (lower is better)
Translates to: QGSALRHVQARL*HHACTFYLQPP
Trigger: GGGCGGTTGCAGGTAGAAGGTGCACGCGTGGTGGCAGAGCCTGGCCTGGACGTGCCTGAGGGCGCTGCCCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS CCA 72 bp GTGAGAACAGCTGGCGAAGAGGGGCCACTGGCACTGTaGCCGTCCCGGGCCCGGCAGTGGTATGAGCCGGCG +
Preference number: 6 (lower is better)
Translates to: VRTAGEEGPLAL*PSRARQWYEPA
Trigger: CGCCGGCTCATACCACTGCCGGGCCCGGGACGGCCACAGTGCCAGTGGCCCCTCTTCGCCAGCTGTTCTCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS TCA 72 bp GCAGCAGGTTGCACACCCTGTGCTCGGGGTTCCCCATaGACTCGGTGCGGCCGCGGAAGCGGGCCTCCACCA +
Preference number: 6 (lower is better)
Translates to: AAGCTPCARGSP*TRCGRGSGPPP
Trigger: TGGTGGAGGCCCGCTTCCGCGGCCGCACCGAGTTCATGGGGAACCCCGAGCACAGGGTGTGCAACCTGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS TCA 72 bp TGGGTGCGTGGGCAGCAGGGTCCGCACAGGTCACTGTaGTGGGGGCACCTTCAGGCACGGCAGCCTCCGGAG +
Preference number: 6 (lower is better)
Translates to: WVRGQQGPHRSL*WGHLQARQPPE
Trigger: CTCCGGAGGCTGCCGTGCCTGAAGGTGCCCCCATCACAGTGACCTGTGCGGACCCTGCTGCCCACGCACCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS TCA 72 bp GCCGCTGGCCCGAGTAGTCGTAGTACCAGATGGCCGTaGTGCCGTCGGGCACCTCCACGTCGGCAGGGAAGC +
Preference number: 6 (lower is better)
Translates to: AAGPSSRSTRWP*CRRAPPRRQGS
Trigger: GCTTCCCTGCCGACGTGGAGGTGCCCGACGGCATCACGGCCATCTGGTACTACGACTACTCGGGCCAGCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS GCA 72 bp TGGCGAGCGGCTCGCTGTCCACTCGGCAATCCAGGATaGCCCGGAGGCCACCCTCAGGCTCCACGAAGACCA +
Preference number: 6 (lower is better)
Translates to: WRAARCPLGNPG*PGGHPQAPRRP
Trigger: TGGTCTTCGTGGAGCCTGAGGGTGGCCTCCGGGGCATCCTGGATTGCCGAGTGGACAGCGAGCCGCTCGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS CCA 72 bp TTGGCCACGGAGAGCTGGCAGCGCAGGATCCGGCCGTaGTCCTGCCAGGACATGGCCATGTGGAGGGTCTCC +
Preference number: 6 (lower is better)
Translates to: LATESWQRRIRP*SCQDMAMWRVS
Trigger: GGAGACCCTCCACATGGCCATGTCCTGGCAGGACCACGGCCGGATCCTGCGCTGCCAGCTCTCCGTGGCCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 72 bp ACACCTTGTAGGGTGGAGGCCACAAGGCGATCCCCGTaGAGCAGCCGCAGCTGGGCCGGAGGGTCACTGTCC +
Preference number: 6 (lower is better)
Translates to: TPCRVEATRRSP*SSRSWAGGSLS
Trigger: GGACAGTGACCCTCCGGCCCAGCTGCGGCTGCTCCACGGGGATCGCCTTGTGGCCTCCACCCTACAAGGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 72 bp GCCACGGGCAGCAGTGTCACGGTCTCCAGGGGACCCTaGGCCCACAGCACCCCATTTCGGAACCAGGAGAAG +
Preference number: 6 (lower is better)
Translates to: ATGSSVTVSRGP*AHSTPFRNQEK
Trigger: CTTCTCCTGGTTCCGAAATGGGGTGCTGTGGGCCCAGGGTCCCCTGGAGACCGTGACACTGCTGCCCGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 72 bp ACCTGCAGCCGTAGGGCGTTTCGGGCCACCTGGACATaGCCTGTCCCTGATGCCAAGCTGTGGACCCCGCTG +
Preference number: 6 (lower is better)
Translates to: TCSRRAFRATWT*PVPDAKLWTPL
Trigger: CAGCGGGGTCCACAGCTTGGCATCAGGGACAGGCCATGTCCAGGTGGCCCGAAACGCCCTACGGCTGCAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS CAA 90 bp AGCAGCCCCAGTGGGGAGCTCAGCCAGGCAGTGGTACATCCCAGCTaGAGCACGAGCCACGTGGGTGAAGGCGAGAGTGGGCACAGGCTC +
Preference number: 6 (lower is better)
Translates to: SSPSGELSQAVVHPS*STSHVGEGESGHRL
Trigger: GAGCCTGTGCCCACTCTCGCCTTCACCCACGTGGCTCGTGCTCAAGCTGGGATGTACCACTGCCTGGCTGAGCTCCCCACTGGGGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS CAA 90 bp CCTTGGTCGCTGGGCCTCAGCGCCTCGATGTCCACCCTCAGGGCATaGGGGGAAGCCAGGACATGGATGTGTGGCTCTGCAGGAGCACCC +
Preference number: 6 (lower is better)
Translates to: PWSLGLSASMSTLRA*GEARTWMCGSAGAP
Trigger: GGGTGCTCCTGCAGAGCCACACATCCATGTCCTGGCTTCCCCCAATGCCCTGAGGGTGGACATCGAGGCGCTGAGGCCCAGCGACCAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS TCA 72 bp CCAGGCGCTGCTGCCCATCCTGGTACCATGTGTAGGTaGGCTGGGCCGGGTGAGTGGTCCACACAAGGCAGG +
Preference number: 6 (lower is better)
Translates to: PGAAAHPGTMCR*AGPGEWSTQGR
Trigger: CCTGCCTTGTGTGGACCACTCACCCGGCCCAGCTCACCTACACATGGTACCAGGATGGGCAGCAGCGCCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS TCA 72 bp AGTGGTACATCCCAGCTTGAGCACGAGCCACGTGGGTaGAGGCGAGAGTGGGCACAGGCTCCGCGTGCAGCC +
Preference number: 6 (lower is better)
Translates to: SGTSQLEHEPRG*RREWAQAPRAA
Trigger: GGCTGCACGCGGAGCCTGTGCCCACTCTCGCCTTCACCCACGTGGCTCGTGCTCAAGCTGGGATGTACCACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS TCA 72 bp GTGGGGAGCTCAGCCAGGCAGTGGTACATCCCAGCTTaGGCACGAGCCACGTGGGTGAAGGCGAGAGTGGGC +
Preference number: 6 (lower is better)
Translates to: VGSSARQWYIPA*ARATWVKARVG
Trigger: GCCCACTCTCGCCTTCACCCACGTGGCTCGTGCTCAAGCTGGGATGTACCACTGCCTGGCTGAGCTCCCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS GCA 72 bp CACCTGCTGCTCCACAGAAGGAAGTGGCTGCGGCGGTaGTGGACCTGCGGAGAGGAGAACAGGAAGGACGGC +
Preference number: 6 (lower is better)
Translates to: HLLLHRRKWLRR*WTCGEENRKDG
Trigger: GCCGTCCTTCCTGTTCTCCTCTCCGCAGGTCCAGCACCGCCGCAGCCACTTCCTTCTGTGGAGCAGCAGGTG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS GCA 72 bp AGCCCCAGCACCTGCTGCTCCACAGAAGGAAGTGGCTaGGGCGGTGCTGGACCTGCGGAGAGGAGAACAGGA +
Preference number: 6 (lower is better)
Translates to: SPSTCCSTEGSG*GGAGPAERRTG
Trigger: TCCTGTTCTCCTCTCCGCAGGTCCAGCACCGCCGCAGCCACTTCCTTCTGTGGAGCAGCAGGTGCTGGGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS GCA 72 bp GCTCAGTGTCACTGCCTGTCCTTCCACCACCTCGGCTaGCGGGCTGATGAGGAGACGGGCGGCATTGGCATG +
Preference number: 6 (lower is better)
Translates to: AQCHCLSFHHLG*RADEETGGIGM
Trigger: CATGCCAATGCCGCCCGTCTCCTCATCAGCCCGGCAGCCGAGGTGGTGGAAGGACAGGCAGTGACACTGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 72 bp GCGCAGGGAGTTGGGACCAGAGGTACCACTGAAGCGTaGGCTGTGATCACTGTCCCCGGAGGTGGAGGCCAG +
Preference number: 6 (lower is better)
Translates to: AQGVGTRGTTEA*AVITVPGGGGQ
Trigger: CTGGCCTCCACCTCCGGGGACAGTGATCACAGCCCACGCTTCAGTGGTACCTCTGGTCCCAACTCCCTGCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 72 bp ACGCAGCAAGTTGGGGGCTTTGGTGACCTTCATGCGTaGGGAACAGCCCCCACAGGTGCTGCAGCCACCCCC +
Preference number: 6 (lower is better)
Translates to: TQQVGGFGDLHA*GTAPTGAAATP
Trigger: GGGGGTGGCTGCAGCACCTGTGGGGGCTGTTCCCCACGCATGAAGGTCACCAAAGCCCCCAACTTGCTGCGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 72 bp GGTCCGGGGGATAGAGTACACTCAGGAGCACGGGAGTaGAGAGCTGGGCACCAGCCTCAGTCAGGATGCGGC +
Preference number: 6 (lower is better)
Translates to: GPGDRVHSGARE*RAGHQPQSGCG
Trigger: GCCGCATCCTGACTGAGGCTGGTGCCCAGCTCTCCACTCCCGTGCTCCTGAGTGTACTCTATCCCCCGGACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 72 bp CCCGGAGGCCACCCTCAGGCTCCACGAAGACCATCATaGTGGGCGTCTTGGGAGGGTAGAGCACACGGAGCA +
Preference number: 6 (lower is better)
Translates to: PGGHPQAPRRPS*WASWEGRAHGA
Trigger: TGCTCCGTGTGCTCTACCCTCCCAAGACGCCCACCATGATGGTCTTCGTGGAGCCTGAGGGTGGCCTCCGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS CCA 72 bp AGGCCACCAGTCGACTGCCAAGGTGGAGAGTCAGGCTaGCGAGCGGCTCGCTGTCCACTCGGCAATCCAGGA +
Preference number: 6 (lower is better)
Translates to: RPPVDCQGGESG*RAARCPLGNPG
Trigger: TCCTGGATTGCCGAGTGGACAGCGAGCCGCTCGCCAGCCTGACTCTCCACCTTGGCAGTCGACTGGTGGCCT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS TCA 72 bp ACCAGTGTGGCCAGGGGCTCACTGACCACAGAGCAGTaGAGGATGCCCACAAGTCCCGCCTGGGTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: TSVARGSLTTEQ*RMPTSPAWVSR
Trigger: CCTGGAGACCCAGGCGGGACTTGTGGGCATCCTTCACTGCTCTGTGGTCAGTGAGCCCCTGGCCACACTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS TCA 72 bp TGGACCCCGCTGCTCGTGGCCAGCACCTTGCCATCATaGGATAGGGCCAGCTCAGCAGGTGGCTCACTGTCC +
Preference number: 6 (lower is better)
Translates to: WTPLLVASTLPS*DRASSAGGSLS
Trigger: GGACAGTGAGCCACCTGCTGAGCTGGCCCTATCTCATGATGGCAAGGTGCTGGCCACGAGCAGCGGGGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS GCA 72 bp CCAAGCTGTGGACCCCGCTGCTCGTGGCCAGCACCTTaGCATCATGAGATAGGGCCAGCTCAGCAGGTGGCT +
Preference number: 6 (lower is better)
Translates to: PSCGPRCSWPAP*HHEIGPAQQVA
Trigger: AGCCACCTGCTGAGCTGGCCCTATCTCATGATGGCAAGGTGCTGGCCACGAGCAGCGGGGTCCACAGCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS GCA 72 bp ACGTGGGTGAAGGCGAGAGTGGGCACAGGCTCCGCGTaGAGCCGCCGGTCATTCCAGAACCATGCAAAGGTG +
Preference number: 6 (lower is better)
Translates to: TWVKARVGTGSA*SRRSFQNHAKV
Trigger: CACCTTTGCATGGTTCTGGAATGACCGGCGGCTGCACGCGGAGCCTGTGCCCACTCTCGCCTTCACCCACGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS CCA 72 bp CTGCTGCTCCACAGAAGGAAGTGGCTGCGGCGGTGCTaGACCTGCGGAGAGGAGAACAGGAAGGACGGCCAA +
Preference number: 6 (lower is better)
Translates to: LLLHRRKWLRRC*TCGEENRKDGQ
Trigger: TTGGCCGTCCTTCCTGTTCTCCTCTCCGCAGGTCCAGCACCGCCGCAGCCACTTCCTTCTGTGGAGCAGCAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 72 bp ATAAGCAGGCAAGACCCCTTCACACCCTGCACGTCCTaGGGACTGGAGACGCCCCATGAGGCCTGGCCTGCT +
Preference number: 6 (lower is better)
Translates to: ISRQDPFTPCTS*GLETPHEAWPA
Trigger: AGCAGGCCAGGCCTCATGGGGCGTCTCCAGTCCCCAGGACGTGCAGGGTGTGAAGGGGTCTTGCCTGCTTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 72 bp GTCTCCAGGTGGCCGACGCCGGTGGGCTCAAACTTCTaGCTGTTGAAGGTGACAGAGCGAGCAGGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: VSRWPTPVGSNF*LLKVTERAGSW
Trigger: CCAGGACCCTGCTCGCTCTGTCACCTTCAACAGCCAGAAGTTTGAGCCCACCGGCGTCGGCCACCTGGAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 72 bp TCCTGCCAGGACATGGCCATGTGGAGGGTCTCCAGGTaGCCGACGCCGGTGGGCTCAAACTTCTGGCTGTTG +
Preference number: 6 (lower is better)
Translates to: SCQDMAMWRVSR*PTPVGSNFWLL
Trigger: CAACAGCCAGAAGTTTGAGCCCACCGGCGTCGGCCACCTGGAGACCCTCCACATGGCCATGTCCTGGCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 72 bp AAGCGGAGCGTGGCCGAGGTCGACTCCTGGAGGGGCTaGCCATCCCGATACCAACGATATGAGGTCCCCTCT +
Preference number: 6 (lower is better)
Translates to: KRSVAEVDSWRG*PSRYQRYEVPS
Trigger: AGAGGGGACCTCATATCGTTGGTATCGGGATGGCCAGCCCCTCCAGGAGTCGACCTCGGCCACGCTCCGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 72 bp TCTTGCACCTGCAGCCGTAGGGCGTTTCGGGCCACCTaGACATGGCCTGTCCCTGATGCCAAGCTGTGGACC +
Preference number: 6 (lower is better)
Translates to: SCTCSRRAFRAT*TWPVPDAKLWT
Trigger: GGTCCACAGCTTGGCATCAGGGACAGGCCATGTCCAGGTGGCCCGAAACGCCCTACGGCTGCAGGTGCAAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS CAA 72 bp TCCAGCATAGCCCCGTGGATCTCCAGACGCAGTGTGTaGGGGGCCACAGCCACATGCAGCCTGGGAGAGCTG +
Preference number: 6 (lower is better)
Translates to: SSIAPWISRRSV*GATATCSLGEL
Trigger: CAGCTCTCCCAGGCTGCATGTGGCTGTGGCCCCCAACACACTGCGTCTGGAGATCCACGGGGCTATGCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CAA 72 bp AGTGGGGAGCTCAGCCAGGCAGTGGTACATCCCAGCTaGAGCACGAGCCACGTGGGTGAAGGCGAGAGTGGG +
Preference number: 6 (lower is better)
Translates to: SGELSQAVVHPS*STSHVGEGESG
Trigger: CCCACTCTCGCCTTCACCCACGTGGCTCGTGCTCAAGCTGGGATGTACCACTGCCTGGCTGAGCTCCCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS CAA 72 bp CTGGGCCTCAGCGCCTCGATGTCCACCCTCAGGGCATaGGGGGAAGCCAGGACATGGATGTGTGGCTCTGCA +
Preference number: 6 (lower is better)
Translates to: LGLSASMSTLRA*GEARTWMCGSA
Trigger: TGCAGAGCCACACATCCATGTCCTGGCTTCCCCCAATGCCCTGAGGGTGGACATCGAGGCGCTGAGGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS GCA 72 bp CATGGCCTGTCCCTGATGCCAAGCTGTGGACCCCGCTaGTCGTGGCCAGCACCTTGCCATCATGAGATAGGG +
Preference number: 6 (lower is better)
Translates to: HGLSLMPSCGPR*SWPAPCHHEIG
Trigger: CCCTATCTCATGATGGCAAGGTGCTGGCCACGAGCAGCGGGGTCCACAGCTTGGCATCAGGGACAGGCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS CCA 72 bp GCCTGGCCCTCTTGGAGCTCAGGTGATGGTGACACCTaGACCCAGGCTCCTCGGACCTGGAAGAAGAGTGAG +
Preference number: 6 (lower is better)
Translates to: AWPSWSSGDGDT*TQAPRTWKKSE
Trigger: CTCACTCTTCTTCCAGGTCCGAGGAGCCTGGGTCCAGGTGTCACCATCACCTGAGCTCCAAGAGGGCCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 72 bp ATGGCTGCAAAGCGGAGCGTGGCCGAGGTCGACTCCTaGAGGGGCTGGCCATCCCGATACCAACGATATGAG +
Preference number: 6 (lower is better)
Translates to: MAAKRSVAEVDS*RGWPSRYQRYE
Trigger: CTCATATCGTTGGTATCGGGATGGCCAGCCCCTCCAGGAGTCGACCTCGGCCACGCTCCGCTTTGCAGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS TCA 72 bp CTCCTGGAGGGGCTGGCCATCCCGATACCAACGATATaGGGTCCCCTCTGGGACTCCTGTGTGTACCTGGCA +
Preference number: 6 (lower is better)
Translates to: LLEGLAIPIPTI*GPLWDSCVYLA
Trigger: TGCCAGGTACACACAGGAGTCCCAGAGGGGACCTCATATCGTTGGTATCGGGATGGCCAGCCCCTCCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS GCA 72 bp CAAGAAGCCCATAGCAGGTTCTTGTGCTGCTCCTGTTaGCTAAGAGGGTGGTGCGCACTGCGCTGGCTGGGC +
Preference number: 6 (lower is better)
Translates to: QEAHSRFLCCSC*LRGWCALRWLG
Trigger: GCCCAGCCAGCGCAGTGCGCACCACCCTCTTAGGCAACAGGAGCAGCACAAGAACCTGCTATGGGCTTCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 72 bp GCAGCCAACGACCGTTGTGGTACCAAGTATAGAGTGTaGGTGCGTGGGCAGCAGGGTCCGCACAGGTCACTG +
Preference number: 6 (lower is better)
Translates to: AANDRCGTKYRV*VRGQQGPHRSL
Trigger: CAGTGACCTGTGCGGACCCTGCTGCCCACGCACCCACACTCTATACTTGGTACCACAACGGTCGTTGGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS CCA 72 bp CCACAGTGCACTGTATCACAGCCATGGATCTGGCCCTaGAGTCCCGGAAGGAGGACAGGACAGCGTCCTGAG +
Preference number: 6 (lower is better)
Translates to: PQCTVSQPWIWP*SPGRRTGQRPE
Trigger: CTCAGGACGCTGTCCTGTCCTCCTTCCGGGACTCCAGGGCCAGATCCATGGCTGTGATACAGTGCACTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS CAA 72 bp CTCCAGGCTGCCTGGGGCAGGTGCAGCACACCAGTCTaGGTTTGGAGGCGTACCCCATCCTTGAGCCACTTA +
Preference number: 6 (lower is better)
Translates to: LQAAWGRCSTPV*VWRRTPSLSHL
Trigger: TAAGTGGCTCAAGGATGGGGTACGCCTCCAAACCAAGACTGGTGTGCTGCACCTGCCCCAGGCAGCCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CAA 72 bp GCCTGGGGCCTGGGCTTGGCAATGATAGGCCCCAGCTaGTGTCAAAGTTATGGCTGCAAAGCGGAGCGTGGC +
Preference number: 6 (lower is better)
Translates to: AWGLGLAMIGPS*CQSYGCKAERG
Trigger: GCCACGCTCCGCTTTGCAGCCATAACTTTGACACAAGCTGGGGCCTATCATTGCCAAGCCCAGGCCCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CAA 90 bp CCAGCATCGCTCCAGGCTGCCTGGGGCAGGTGCAGCACACCAGTCTaGGTTTGGAGGCGTACCCCATCCTTGAGCCACTTAATGGAACTG +
Preference number: 6 (lower is better)
Translates to: PASLQAAWGRCSTPV*VWRRTPSLSHLMEL
Trigger: CAGTTCCATTAAGTGGCTCAAGGATGGGGTACGCCTCCAAACCAAGACTGGTGTGCTGCACCTGCCCCAGGCAGCCTGGAGCGATGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CAA 90 bp CCAGAGTCCCCAAGGCCCAGTTCTCGGACCTCTAACTTCAGGGAGTaGGCCTCAGCTTTAGCCTGGAACCGACCATGGGATGGGACCTGG +
Preference number: 6 (lower is better)
Translates to: PESPRPSSRTSNFRE*ASALAWNRPWDGTW
Trigger: CCAGGTCCCATCCCATGGTCGGTTCCAGGCTAAAGCTGAGGCCAACTCCCTGAAGTTAGAGGTCCGAGAACTGGGCCTTGGGGACTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 72 bp ACCTCTAACTTCAGGGAGTTGGCCTCAGCTTTAGCCTaGAACCGACCATGGGATGGGACCTGGGGACCCAGG +
Preference number: 6 (lower is better)
Translates to: TSNFRELASALA*NRPWDGTWGPR
Trigger: CCTGGGTCCCCAGGTCCCATCCCATGGTCGGTTCCAGGCTAAAGCTGAGGCCAACTCCCTGAAGTTAGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 72 bp GTGGCTCACTGTCCACAGTGCACTGTATCACAGCCATaGATCTGGCCCTGGAGTCCCGGAAGGAGGACAGGA +
Preference number: 6 (lower is better)
Translates to: VAHCPQCTVSQP*IWPWSPGRRTG
Trigger: TCCTGTCCTCCTTCCGGGACTCCAGGGCCAGATCCATGGCTGTGATACAGTGCACTGTGGACAGTGAGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS CCA 72 bp CCCAGGACATTTGAGGCAGAACAGATGTATTCCCCTTaGTCGCTGGGCCTCAGCGCCTCGATGTCCACCCTC +
Preference number: 6 (lower is better)
Translates to: PRTFEAEQMYSP*SLGLSASMSTL
Trigger: GAGGGTGGACATCGAGGCGCTGAGGCCCAGCGACCAAGGGGAATACATCTGTTCTGCCTCAAATGTCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS CAA 72 bp GGCTGCCTGGGGCAGGTGCAGCACACCAGTCTTGGTTaGGAGGCGTACCCCATCCTTGAGCCACTTAATGGA +
Preference number: 6 (lower is better)
Translates to: GCLGQVQHTSLG*EAYPILEPLNG
Trigger: TCCATTAAGTGGCTCAAGGATGGGGTACGCCTCCAAACCAAGACTGGTGTGCTGCACCTGCCCCAGGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CAA 90 bp ATCGCTCCAGGCTGCCTGGGGCAGGTGCAGCACACCAGTCTTGGTTaGGAGGCGTACCCCATCCTTGAGCCACTTAATGGAACTGACTGC +
Preference number: 6 (lower is better)
Translates to: IAPGCLGQVQHTSLG*EAYPILEPLNGTDC
Trigger: GCAGTCAGTTCCATTAAGTGGCTCAAGGATGGGGTACGCCTCCAAACCAAGACTGGTGTGCTGCACCTGCCCCAGGCAGCCTGGAGCGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS GCA 72 bp AAGCTTGGGCAAGAAGCCCATAGCAGGTTCTTGTGCTaGTCCTGTTGCCTAAGAGGGTGGTGCGCACTGCGC +
Preference number: 6 (lower is better)
Translates to: KLGQEAHSRFLC*SCCLRGWCALR
Trigger: GCGCAGTGCGCACCACCCTCTTAGGCAACAGGAGCAGCACAAGAACCTGCTATGGGCTTCTTGCCCAAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS GCA 72 bp GCAATGATAGGCCCCAGCTTGTGTCAAAGTTATGGCTaGAAAGCGGAGCGTGGCCGAGGTCGACTCCTGGAG +
Preference number: 6 (lower is better)
Translates to: AMIGPSLCQSYG*KAERGRGRLLE
Trigger: CTCCAGGAGTCGACCTCGGCCACGCTCCGCTTTGCAGCCATAACTTTGACACAAGCTGGGGCCTATCATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS GCA 72 bp CCAACGACCGTTGTGGTACCAAGTATAGAGTGTGGGTaGGTGGGCAGCAGGGTCCGCACAGGTCACTGTGAT +
Preference number: 6 (lower is better)
Translates to: PTTVVVPSIECG*VGSRVRTGHCD
Trigger: ATCACAGTGACCTGTGCGGACCCTGCTGCCCACGCACCCACACTCTATACTTGGTACCACAACGGTCGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS GCA 72 bp ATAGGGCCAGCTCAGCAGGTGGCTCACTGTCCACAGTaGACTGTATCACAGCCATGGATCTGGCCCTGGAGT +
Preference number: 6 (lower is better)
Translates to: IGPAQQVAHCPQ*TVSQPWIWPWS
Trigger: ACTCCAGGGCCAGATCCATGGCTGTGATACAGTGCACTGTGGACAGTGAGCCACCTGCTGAGCTGGCCCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS CCA 72 bp GCTGCCTGGGGCAGGTGCAGCACACCAGTCTTGGTTTaGAGGCGTACCCCATCCTTGAGCCACTTAATGGAA +
Preference number: 6 (lower is better)
Translates to: AAWGRCSTPVLV*RRTPSLSHLME
Trigger: TTCCATTAAGTGGCTCAAGGATGGGGTACGCCTCCAAACCAAGACTGGTGTGCTGCACCTGCCCCAGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 72 bp CATTTGAGGCAGAACAGATGTATTCCCCTTGGTCGCTaGGCCTCAGCGCCTCGATGTCCACCCTCAGGGCAT +
Preference number: 6 (lower is better)
Translates to: HLRQNRCIPLGR*ASAPRCPPSGH
Trigger: ATGCCCTGAGGGTGGACATCGAGGCGCTGAGGCCCAGCGACCAAGGGGAATACATCTGTTCTGCCTCAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS CAA 90 bp CAGGCAAATCATGCTGCAGCAGGAGGGATACAGGGAAGGAAGCCTTaGGGCCTAAGAGCTGGGCTTTTGTGCAGAGTGGCCTGGGAGATG +
Preference number: 6 (lower is better)
Translates to: QANHAAAGGIQGRKP*GLRAGLLCRVAWEM
Trigger: CATCTCCCAGGCCACTCTGCACAAAAGCCCAGCTCTTAGGCCCAAAGGCTTCCTTCCCTGTATCCCTCCTGCTGCAGCATGATTTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419548.4
CDS TCA 72 bp CGCGTGCACCTTCTACCTGCAACCGCCCGATGGTGCTaGTTGAGCCCAGCAAGTTTTGGGCTGTGCAAACAT +
Preference number: 6 (lower is better)
Translates to: RVHLLPATARWC*LSPASFGLCKH
Trigger: ATGTTTGCACAGCCCAAAACTTGCTGGGCTCAATCAGCACCATCGGGCGGTTGCAGGTAGAAGGTGCACGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS CCA 72 bp TGCCAGCAGCTTCCCGGCTCACGTTGCAAGTCAAGTTaGCTTCTGTGCCCTCCTGAAGTGTGTGTGATGGTG +
Preference number: 6 (lower is better)
Translates to: CQQLPGSRCKSS*LLCPPEVCVMV
Trigger: CACCATCACACACACTTCAGGAGGGCACAGAAGCCAACTTGACTTGCAACGTGAGCCGGGAAGCTGCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CAA 72 bp GAGGAGAAGCTTGGGCAAGAAGCCCATAGCAGGTTCTaGTGCTGCTCCTGTTGCCTAAGAGGGTGGTGCGCA +
Preference number: 6 (lower is better)
Translates to: EEKLGQEAHSRF*CCSCCLRGWCA
Trigger: TGCGCACCACCCTCTTAGGCAACAGGAGCAGCACAAGAACCTGCTATGGGCTTCTTGCCCAAGCTTCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CAA 72 bp TGGCCTGCTGGGAAGAATGAGGCCAGGAGGAGAAGCTaGGGCAAGAAGCCCATAGCAGGTTCTTGTGCTGCT +
Preference number: 6 (lower is better)
Translates to: WPAGKNEARRRS*GKKPIAGSCAA
Trigger: AGCAGCACAAGAACCTGCTATGGGCTTCTTGCCCAAGCTTCTCCTCCTGGCCTCATTCTTCCCAGCAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CAA 72 bp CCAAGGCCCAGTTCTCGGACCTCTAACTTCAGGGAGTaGGCCTCAGCTTTAGCCTGGAACCGACCATGGGAT +
Preference number: 6 (lower is better)
Translates to: PRPSSRTSNFRE*ASALAWNRPWD
Trigger: ATCCCATGGTCGGTTCCAGGCTAAAGCTGAGGCCAACTCCCTGAAGTTAGAGGTCCGAGAACTGGGCCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CAA 90 bp CTCGGACCTGGAAGAAGAGTGAGGTGTTGGATGATCCAAGAACATTaGTGGCCTCACAGCGGTAGCTGCCAGAGTCCCCAAGGCCCAGTT +
Preference number: 6 (lower is better)
Translates to: LGPGRRVRCWMIQEH*WPHSGSCQSPQGPV
Trigger: AACTGGGCCTTGGGGACTCTGGCAGCTACCGCTGTGAGGCCACAAATGTTCTTGGATCATCCAACACCTCACTCTTCTTCCAGGTCCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS TCA 72 bp CAGAGGTACAAGCCCTCCTCTTCCAGCAAAGGGTTGTaGATCTCCACACGCAGCAAGTTGGGGGCTTTGGTG +
Preference number: 6 (lower is better)
Translates to: QRYKPSSSSKGL*ISTRSKLGALV
Trigger: CACCAAAGCCCCCAACTTGCTGCGTGTGGAGATTCACAACCCTTTGCTGGAAGAGGAGGGCTTGTACCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS GCA 72 bp GCGTACCCCATCCTTGAGCCACTTAATGGAACTGACTaGAGGGTAGCTGCTGTTCACCTGGCAGGTGAGTGT +
Preference number: 6 (lower is better)
Translates to: AYPILEPLNGTD*RVAAVHLAGEC
Trigger: ACACTCACCTGCCAGGTGAACAGCAGCTACCCTGCAGTCAGTTCCATTAAGTGGCTCAAGGATGGGGTACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 72 bp CCCAGGCTCCTCGGACCTGGAAGAAGAGTGAGGTGTTaGATGATCCAAGAACATTTGTGGCCTCACAGCGGT +
Preference number: 6 (lower is better)
Translates to: PRLLGPGRRVRC*MIQEHLWPHSG
Trigger: ACCGCTGTGAGGCCACAAATGTTCTTGGATCATCCAACACCTCACTCTTCTTCCAGGTCCGAGGAGCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CAA 72 bp GAGGTTGCATTTCCAAGGGAGTTGGTGGCTGAGCACTaGTACTCCCCACTGTCAGTTTCCTCCAGGTCTCGG +
Preference number: 6 (lower is better)
Translates to: EVAFPRELVAEH*YSPLSVSSRSR
Trigger: CCGAGACCTGGAGGAAACTGACAGTGGGGAGTACAAGTGCTCAGCCACCAACTCCCTTGGAAATGCAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS TCA 72 bp TGCACCTTCTACCTGCAACCGCCCGATGGTGCTGATTaGGCCCAGCAAGTTTTGGGCTGTGCAAACATAGGT +
Preference number: 6 (lower is better)
Translates to: CTFYLQPPDGAD*AQQVLGCANIG
Trigger: ACCTATGTTTGCACAGCCCAAAACTTGCTGGGCTCAATCAGCACCATCGGGCGGTTGCAGGTAGAAGGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344754.6
ENST00000419548.4
CDS CCA 72 bp AGTCCAGGGTGGAGGTTGCATTTCCAAGGGAGTTGGTaGCTGAGCACTTGTACTCCCCACTGTCAGTTTCCT +
Preference number: 6 (lower is better)
Translates to: SPGWRLHFQGSW*LSTCTPHCQFP
Trigger: AGGAAACTGACAGTGGGGAGTACAAGTGCTCAGCCACCAACTCCCTTGGAAATGCAACCTCCACCCTGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 72 bp GGAAGTCCAGGGTGGAGGTTGCATTTCCAAGGGAGTTaGTGGCTGAGCACTTGTACTCCCCACTGTCAGTTT +
Preference number: 6 (lower is better)
Translates to: GSPGWRLHFQGS*WLSTCTPHCQF
Trigger: AAACTGACAGTGGGGAGTACAAGTGCTCAGCCACCAACTCCCTTGGAAATGCAACCTCCACCCTGGACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 72 bp AGAAGAGTGAGGTGTTGGATGATCCAAGAACATTTGTaGCCTCACAGCGGTAGCTGCCAGAGTCCCCAAGGC +
Preference number: 6 (lower is better)
Translates to: RRVRCWMIQEHL*PHSGSCQSPQG
Trigger: GCCTTGGGGACTCTGGCAGCTACCGCTGTGAGGCCACAAATGTTCTTGGATCATCCAACACCTCACTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS TCA 72 bp GCTGCATCAGGATCAATGAGCTGCGTGGTCTCTTTCTaGAAAGCCATCTCCACCGAATTCTCGCCCATGCTC +
Preference number: 6 (lower is better)
Translates to: AASGSMSCVVSF*KAISTEFSPML
Trigger: GAGCATGGGCGAGAATTCGGTGGAGATGGCTTTTCAGAAAGAGACCACGCAGCTCATTGATCCTGATGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 72 bp TGTACCAGCTGTAGCGGAGATCACTGGGTGCCTCATTaGGTGTGTTGCAGACTAGTGTCACTGTCTGGTTCT +
Preference number: 6 (lower is better)
Translates to: CTSCSGDHWVPH*VCCRLVSLSGS
Trigger: AGAACCAGACAGTGACACTAGTCTGCAACACACCCAATGAGGCACCCAGTGATCTCCGCTACAGCTGGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS CCA 72 bp GGACATGGTTCTTGTACCAGCTGTAGCGGAGATCACTaGGTGCCTCATTGGGTGTGTTGCAGACTAGTGTCA +
Preference number: 6 (lower is better)
Translates to: GHGSCTSCSGDH*VPHWVCCRLVS
Trigger: TGACACTAGTCTGCAACACACCCAATGAGGCACCCAGTGATCTCCGCTACAGCTGGTACAAGAACCATGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344754.6
CDS GCA 72 bp CTTTCTGAAAAGCCATCTCCACCGAATTCTCGCCCATaGTCTGCTTACAAACACGCCTCCTTCTCCAGGTGT +
Preference number: 6 (lower is better)
Translates to: LSEKPSPPNSRP*SAYKHASFSRC
Trigger: ACACCTGGAGAAGGAGGCGTGTTTGTAAGCAGAGCATGGGCGAGAATTCGGTGGAGATGGCTTTTCAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344754.6