RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SIDT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000149577

Ensembl transcript IDs: ENST00000278951.11, ENST00000324225.9, ENST00000431081.6, ENST00000524842.5, ENST00000524988.1, ENST00000525065.1, ENST00000525339.1, ENST00000525478.5, ENST00000526813.1, ENST00000527654.1, ENST00000528397.1, ENST00000529441.5, ENST00000529484.5, ENST00000530948.5, ENST00000531255.1, ENST00000531353.1, ENST00000532062.1, ENST00000532960.5, ENST00000620360.4, ENST00000628876.2

Found 818 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAAGAGCCAGCCCTGAGCACAGGTCAGAGGGAAGAGAATACGCACTaGCCCAGGCCCCTTGCAGGCCTTAGCACCAAAAGTCTGGCACCA +
Preference number: 1 (lower is better)
Translates to: KEPALSTGQREENTH*PRPLAGLSTKSLAP
Trigger: TGGTGCCAGACTTTTGGTGCTAAGGCCTGCAAGGGGCCTGGGGCAGTGCGTATTCTCTTCCCTCTGACCTGTGCTCAGGGCTGGCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR TCA 90 bp ATCCCTCCTTTGCCCCTGGACATTCTTGGGCAGTGTCAATGGCACTaGAAGGCCACCAGCTGGGGTTTGGCAAGACTAAGGGCCTGGAAA +
Preference number: 1 (lower is better)
Translates to: IPPLPLDILGQCQWH*KATSWGLARLRAWK
Trigger: TTTCCAGGCCCTTAGTCTTGCCAAACCCCAGCTGGTGGCCTTTCAGTGCCATTGACACTGCCCAAGAATGTCCAGGGGCAAAGGAGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR CCA 90 bp TGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTaGACATTCTTGGGCAGTGTCAATGGCACTGAAAGGCCACCAGCT +
Preference number: 1 (lower is better)
Translates to: WRQNGLNSVSSLLCP*TFLGSVNGTERPPA
Trigger: AGCTGGTGGCCTTTCAGTGCCATTGACACTGCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR TCA 90 bp AGGTGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGAGCTCAGGGCCCCTTaGGGTGAAGCGAAGGGCCCA +
Preference number: 2 (lower is better)
Translates to: RWDEGDPRTRVARVPRAGELRAP*GEAKGP
Trigger: TGGGCCCTTCGCTTCACCTCAAGGGGCCCTGAGCTC...CCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR TCA 90 bp AGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGCAGGGCCCCTTGAGGTaGAGCGAAGGGCCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: SNLANIWGFQGSRPAPRQQGPLR*SEGPSS
Trigger: GGAGCTGGGCCCTTCGCTTCACCTCAAGGGGCCCTG...CTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR TCA 90 bp AATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGCAGGGCCCCTTGAGGTaGAGCGAAGGGCCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: NLANIWGFQGSRPAPRQRQGPLR*SEGPSS
Trigger: GGAGCTGGGCCCTTCGCTTCACCTCAAGGGGCCCTG...CCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR TCA 90 bp GCCCTGAGCACAGGTCAGAGGGAAGAGAATACGCACTGCCCCAGGCCCCTTGCACAGGGCCCCTTGAGGTaGAGCGAAGGGCCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: ALSTGQREENTHCPRPLAQGPLR*SEGPSS
Trigger: GGAGCTGGGCCCTTCGCTTCACCTCAAGGGGCCCTG...TGCAAGGGGCCTGGGGCAGTGCGTATTCTCTTCCCTCTGACCTGTGCTCAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR TCA 90 bp ATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGGGAGCTCAGGGCCCCTTaGGGTGAAGCGAAGGGCCCA +
Preference number: 2 (lower is better)
Translates to: IWPTSGGSRGAGLLLGRGELRAP*GEAKGP
Trigger: TGGGCCCTTCGCTTCACCTCAAGGGGCCCTGAGCTC...CCCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR CCA 90 bp ATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGGGCTGGGCAGCGGTGCTaGGACTCATCCCCACAGCAC +
Preference number: 2 (lower is better)
Translates to: IWPTSGGSRGAGLLLGRGAGQRC*DSSPQH
Trigger: GTGCTGTGGGGATGAGTCCCAGCACCGCTGCCCAGC...CCCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR TCA 90 bp GCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGAGCTCAGGGCCCCTTaGGGTGAAGCGAAGGGCCCA +
Preference number: 2 (lower is better)
Translates to: AIWPTSGGSRGAGLLLGRELRAP*GEAKGP
Trigger: TGGGCCCTTCGCTTCACCTCAAGGGGCCCTGAGCTC...TCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR GCA 90 bp AGGTGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGAGCTGCAAGGTTCCATaGCACCCCATGGCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: RWDEGDPRTRVARVPRAGSCKVP*HPMAVP
Trigger: TGGGACAGCCATGGGGTGGCATGGAACCTTGCAGCT...CCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR CCA 90 bp AATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGGCTGCCATCCAGTGCTaGGCAGCGGTGCTGGGACTC +
Preference number: 2 (lower is better)
Translates to: NLANIWGFQGSRPAPRQRAAIQC*AAVLGL
Trigger: GAGTCCCAGCACCGCTGCCCAGCACTGGATGGCAGC...CCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR TCA 90 bp CCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCCAGGGCCCCTTGAGGTaGAGCGAAGGGCCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: PQLWRQNGLNSVSSLLCPQGPLR*SEGPSS
Trigger: GGAGCTGGGCCCTTCGCTTCACCTCAAGGGGCCCTG...GGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR CCA 90 bp GCCCTGAGCACAGGTCAGAGGGAAGAGAATACGCACTGCCCCAGGCCCCTTGCAATCCAAGGACCAGGGTaGCCAGGGTGCCCAGAGCTG +
Preference number: 2 (lower is better)
Translates to: ALSTGQREENTHCPRPLAIQGPG*PGCPEL
Trigger: CAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGAT...TGCAAGGGGCCTGGGGCAGTGCGTATTCTCTTCCCTCTGACCTGTGCTCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR CCA 90 bp GGGGTGCCCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTGCTGCCATCCAGTGCTaGGCAGCGGTGCTGGGACTC +
Preference number: 2 (lower is better)
Translates to: GVPTAVEAERAELCIIPPAAIQC*AAVLGL
Trigger: GAGTCCCAGCACCGCTGCCCAGCACTGGATGGCAGC...AGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGGGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR TCA 90 bp AGGTGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGCAGCACATCCCTTCCTaGAGCCCCTTTAGTATCCAG +
Preference number: 2 (lower is better)
Translates to: RWDEGDPRTRVARVPRAGQHIPS*SPFSIQ
Trigger: CTGGATACTAAAGGGGCTTCAGGAAGGGATGTGCTG...CCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278951.11
3UTR-3UTR CCA 90 bp GGGGTGCCCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTCCTCAGCATCTGGGGTaGACCAGGTGGGACGAAGGG +
Preference number: 2 (lower is better)
Translates to: GVPTAVEAERAELCIIPPPQHLG*TRWDEG
Trigger: CCCTTCGTCCCACCTGGTCCACCCCAGATGCTGAGG...AGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGGGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR GCA 90 bp GCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAAGCTGCAAGGTTCCATaGCACCCCATGGCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: AIWPTSGGSRGAGLLLGRSCKVP*HPMAVP
Trigger: TGGGACAGCCATGGGGTGGCATGGAACCTTGCAGCT...TCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR CCA 90 bp CCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCATCCAAGGACCAGGGTaGCCAGGGTGCCCAGAGCTG +
Preference number: 2 (lower is better)
Translates to: PQLWRQNGLNSVSSLLCPIQGPG*PGCPEL
Trigger: CAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGAT...GGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR GCA 90 bp GGGGTGCCCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTAGCTGCAAGGTTCCATaGCACCCCATGGCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: GVPTAVEAERAELCIIPPSCKVP*HPMAVP
Trigger: TGGGACAGCCATGGGGTGGCATGGAACCTTGCAGCT...AGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGGGCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR GCA 90 bp GAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTTCGGCAGAGGGCAGCTaGAAGGTTCCATGCCACCCC +
Preference number: 2 (lower is better)
Translates to: EESSNLANIWGFQGSRPASAEGS*KVPCHP
Trigger: GGGGTGGCATGGAACCTTGCAGCTGCCCTCTGCCGA...AGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR GCA 90 bp CCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCGAAGAGAATACGCACTaGCCCAGGCCCCTTGCAGGC +
Preference number: 2 (lower is better)
Translates to: PQLWRQNGLNSVSSLLCPEENTH*PRPLAG
Trigger: GCCTGCAAGGGGCCTGGGGCAGTGCGTATTCTCTTC...GGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR GCA 90 bp ACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCGTATCATCCCTCCTTTaGCCCTGGACATTCTTGGGC +
Preference number: 2 (lower is better)
Translates to: TKGIQGPGWPGCPELGQFVSSLL*PWTFLG
Trigger: GCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATAC...GAATTGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR CCA 90 bp AGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCGCTGGGCAGCGGTGCTaGGACTCATCCCCACAGCAC +
Preference number: 2 (lower is better)
Translates to: RVARVPRAGAILCKLQGFAGQRC*DSSPQH
Trigger: GTGCTGTGGGGATGAGTCCCAGCACCGCTGCCCAGC...GAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR CCA 90 bp ACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCGCTGCCATCCAGTGCTaGGCAGCGGTGCTGGGACTC +
Preference number: 2 (lower is better)
Translates to: TEKKAAIWPTSGGSRGAGAAIQC*AAVLGL
Trigger: GAGTCCCAGCACCGCTGCCCAGCACTGGATGGCAGC...GCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR CCA 90 bp GGGGTGCCCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTAAGGACAGGGGCCCATaGAAGGCCCCAACACTGAGA +
Preference number: 2 (lower is better)
Translates to: GVPTAVEAERAELCIIPPKDRGP*KAPTLR
Trigger: TCTCAGTGTTGGGGCCTTCCATGGGCCCCTGTCCTT...AGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGGGCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR CCA 90 bp ACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCAAGTCTGGCACCAGCTaGCCAACCCCCAAAATCTCA +
Preference number: 2 (lower is better)
Translates to: TKGIQGPGWPGCPELGQFKSGTS*PTPKIS
Trigger: TGAGATTTTGGGGGTTGGCCAGCTGGTGCCAGACTT...GAATTGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR TCA 90 bp AGGTGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGAGGTATGTGTGTGCATaGCTAACACAGAACTTGCCT +
Preference number: 2 (lower is better)
Translates to: RWDEGDPRTRVARVPRAGRYVCA*LTQNLP
Trigger: AGGCAAGTTCTGTGTTAGTCATGCACACACATACCT...CCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR TCA 90 bp CAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGCACAGCACGACAGAGTaGCCGGTCTATGACACAAAG +
Preference number: 2 (lower is better)
Translates to: QFGQHLGVPGEQACSSAEHSTTE*PVYDTK
Trigger: CTTTGTGTCATAGACCGGTCACTCTGTCGTGCTGTG...CTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR TCA 90 bp GCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGACACAGCACGACAGAGTaGCCGGTCTATGACACAAAG +
Preference number: 2 (lower is better)
Translates to: AIWPTSGGSRGAGLLLGRHSTTE*PVYDTK
Trigger: CTTTGTGTCATAGACCGGTCACTCTGTCGTGCTGTG...TCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR TCA 90 bp CCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCCAGTGTCAATGGCACTaGAAGGCCACCAGCTGGGGT +
Preference number: 2 (lower is better)
Translates to: PQLWRQNGLNSVSSLLCPQCQWH*KATSWG
Trigger: ACCCCAGCTGGTGGCCTTTCAGTGCCATTGACACTG...GGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR CCA 90 bp ATCCTTCCTCTTGCAAAGGGACAAATGGAGAGCCAAAGGACAGGGGCCCATGGAGCTGGGCAGCGGTGCTaGGACTCATCCCCACAGCAC +
Preference number: 2 (lower is better)
Translates to: ILPLAKGQMESQRTGAHGAGQRC*DSSPQH
Trigger: GTGCTGTGGGGATGAGTCCCAGCACCGCTGCCCAGC...TCCATGGGCCCCTGTCCTTTGGCTCTCCATTTGTCCCTTTGCAAGAGGAAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR CCA 90 bp GAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGCTGCCATCCAGTGCTaGGCAGCGGTGCTGGGACTC +
Preference number: 2 (lower is better)
Translates to: EAERAELCIIPPLPLDILAAIQC*AAVLGL
Trigger: GAGTCCCAGCACCGCTGCCCAGCACTGGATGGCAGC...AAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR TCA 90 bp GTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAGAGCTCAGGGCCCCTTaGGGTGAAGCGAAGGGCCCA +
Preference number: 2 (lower is better)
Translates to: VARVPRAGAILCKLQGFIELRAP*GEAKGP
Trigger: TGGGCCCTTCGCTTCACCTCAAGGGGCCCTGAGCTC...TATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR GCA 90 bp ATCCTTCCTCTTGCAAAGGGACAAATGGAGAGCCAAAGGACAGGGGCCCATGGATCGGCAGAGGGCAGCTaGAAGGTTCCATGCCACCCC +
Preference number: 2 (lower is better)
Translates to: ILPLAKGQMESQRTGAHGSAEGS*KVPCHP
Trigger: GGGGTGGCATGGAACCTTGCAGCTGCCCTCTGCCGA...TCCATGGGCCCCTGTCCTTTGGCTCTCCATTTGTCCCTTTGCAAGAGGAAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR CCA 90 bp CTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCAGTGTCAATGGCACTGCCCATCCTCAGCATCTaGGGTGGACCAGGTGGGACG +
Preference number: 2 (lower is better)
Translates to: LYHPSFAPGHSWAVSMALPILSI*GGPGGT
Trigger: CGTCCCACCTGGTCCACCCCAGATGCTGAGGATGGG...CAGTGCCATTGACACTGCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR CCA 90 bp CCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCAATTTGGCCAACATCTaGGGGTTCCAGGGGAGCAGG +
Preference number: 2 (lower is better)
Translates to: PQLWRQNGLNSVSSLLCPNLANI*GFQGSR
Trigger: CCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATT...GGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR TCA 90 bp CCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCAGAGAACTGGGGCCCTaGTACAGGACAGAGATTCAG +
Preference number: 2 (lower is better)
Translates to: PQLWRQNGLNSVSSLLCPRELGP*YRTEIQ
Trigger: CTGAATCTCTGTCCTGTATCAGGGCCCCAGTTCTCT...GGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR TCA 90 bp CAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCCCCATCCATCCTGGCTaGCTGGAATGGGCAGTGATG +
Preference number: 2 (lower is better)
Translates to: QNGLNSVSSLLCPWTFLGPIHPG*LEWAVM
Trigger: CATCACTGCCCATTCCAGTCAGCCAGGATGGATGGG...GCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR GCA 90 bp AGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCAGCTGCAAGGTTCCATaGCACCCCATGGCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: RVARVPRAGAILCKLQGFSCKVP*HPMAVP
Trigger: TGGGACAGCCATGGGGTGGCATGGAACCTTGCAGCT...GAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR GCA 90 bp GAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTTCCCTCCAGTCCTGGTaGTGGCATCAGTCTGGGAGC +
Preference number: 2 (lower is better)
Translates to: EAERAELCIIPPLPLDILSLQSW*WHQSGS
Trigger: GCTCCCAGACTGATGCCAGCACCAGGACTGGAGGGA...AAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR TCA 90 bp AATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGAACACAGAACTTGCCTaGAGACTGGACGGAAACTTA +
Preference number: 2 (lower is better)
Translates to: NLANIWGFQGSRPAPRQRNTELA*RLDGNL
Trigger: TAAGTTTCCGTCCAGTCTTCAGGCAAGTTCTGTGTT...CCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR TCA 90 bp AATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGAGGTATGTGTGTGCATaGCTAACACAGAACTTGCCT +
Preference number: 2 (lower is better)
Translates to: NLANIWGFQGSRPAPRQRRYVCA*LTQNLP
Trigger: AGGCAAGTTCTGTGTTAGTCATGCACACACATACCT...CCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR TCA 90 bp GGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCAAGAGTGACCGGTCTATaGCACAAAGGAGCTCAGGGC +
Preference number: 2 (lower is better)
Translates to: GWPGCPELGQFFVNSKVSRVTGL*HKGAQG
Trigger: GCCCTGAGCTCCTTTGTGTCATAGACCGGTCACTCT...TGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR TCA 90 bp CAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCAGAGTGACCGGTCTATaGCACAAAGGAGCTCAGGGC +
Preference number: 2 (lower is better)
Translates to: QNGLNSVSSLLCPWTFLGRVTGL*HKGAQG
Trigger: GCCCTGAGCTCCTTTGTGTCATAGACCGGTCACTCT...GCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR TCA 90 bp GAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTCAGTGTCAATGGCACTaGAAGGCCACCAGCTGGGGT +
Preference number: 2 (lower is better)
Translates to: EAERAELCIIPPLPLDILQCQWH*KATSWG
Trigger: ACCCCAGCTGGTGGCCTTTCAGTGCCATTGACACTG...AAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR CCA 90 bp GGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGATCCAGACCCACCTCACCCATCCTCAGCATCTaGGGTGGACCAGGTGGGACG +
Preference number: 2 (lower is better)
Translates to: GNATIAWRRSEKRSRPTSPILSI*GGPGGT
Trigger: CGTCCCACCTGGTCCACCCCAGATGCTGAGGATGGG...TGAGGTGGGTCTGGATCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
3UTR-3UTR CCA 90 bp CTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCAGTGTCAATGGCACTGAAGGACAGGGGCCCATaGAAGGCCCCAACACTGAGA +
Preference number: 2 (lower is better)
Translates to: LYHPSFAPGHSWAVSMALKDRGP*KAPTLR
Trigger: TCTCAGTGTTGGGGCCTTCCATGGGCCCCTGTCCTT...CAGTGCCATTGACACTGCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR CCA 90 bp CAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCTTAGCACCAAAAGTCTaGCACCAGCTGGCCAACCCC +
Preference number: 2 (lower is better)
Translates to: QNGLNSVSSLLCPWTFLGLAPKV*HQLANP
Trigger: GGGGTTGGCCAGCTGGTGCCAGACTTTTGGTGCTAA...GCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR CCA 90 bp CTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCAGTGTCAATGGCACTGTTCTCCCTCCAGTCCTaGTGCTGGCATCAGTCTGGG +
Preference number: 2 (lower is better)
Translates to: LYHPSFAPGHSWAVSMALFSLQS*CWHQSG
Trigger: CCCAGACTGATGCCAGCACCAGGACTGGAGGGAGAA...CAGTGCCATTGACACTGCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR TCA 90 bp ATCCTTCCTCTTGCAAAGGGACAAATGGAGAGCCAAAGGACAGGGGCCCATGGAAGAGTGACCGGTCTATaGCACAAAGGAGCTCAGGGC +
Preference number: 2 (lower is better)
Translates to: ILPLAKGQMESQRTGAHGRVTGL*HKGAQG
Trigger: GCCCTGAGCTCCTTTGTGTCATAGACCGGTCACTCT...TCCATGGGCCCCTGTCCTTTGGCTCTCCATTTGTCCCTTTGCAAGAGGAAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR TCA 90 bp CAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCCACAGCACGACAGAGTaGCCGGTCTATGACACAAAG +
Preference number: 2 (lower is better)
Translates to: QNGLNSVSSLLCPWTFLGHSTTE*PVYDTK
Trigger: CTTTGTGTCATAGACCGGTCACTCTGTCGTGCTGTG...GCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR TCA 90 bp GGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCACACAGCACGACAGAGTaGCCGGTCTATGACACAAAG +
Preference number: 2 (lower is better)
Translates to: GWPGCPELGQFFVNSKVSHSTTE*PVYDTK
Trigger: CTTTGTGTCATAGACCGGTCACTCTGTCGTGCTGTG...TGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR CCA 90 bp GCCCTGAGCACAGGTCAGAGGGAAGAGAATACGCACTGCCCCAGGCCCCTTGCAAATGCAACCATAGCATaGAGACGCTCTGAGAAAAGA +
Preference number: 2 (lower is better)
Translates to: ALSTGQREENTHCPRPLANATIA*RRSEKR
Trigger: TCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATT...TGCAAGGGGCCTGGGGCAGTGCGTATTCTCTTCCCTCTGACCTGTGCTCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
3UTR-3UTR CCA 90 bp GAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTAATTTGGCCAACATCTaGGGGTTCCAGGGGAGCAGG +
Preference number: 2 (lower is better)
Translates to: EAERAELCIIPPLPLDILNLANI*GFQGSR
Trigger: CCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATT...AAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR CCA 90 bp GAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTCAGCCCAAAGAGAACTaGGGCCCTGATACAGGACAG +
Preference number: 2 (lower is better)
Translates to: EAERAELCIIPPLPLDILQPKEN*GPDTGQ
Trigger: CTGTCCTGTATCAGGGCCCCAGTTCTCTTTGGGCTG...AAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR CCA 90 bp CTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCAGTGTCAATGGCACTGTACCCCCATCCATCCTaGCTGACTGGAATGGGCAGT +
Preference number: 2 (lower is better)
Translates to: LYHPSFAPGHSWAVSMALYPHPS*LTGMGS
Trigger: ACTGCCCATTCCAGTCAGCCAGGATGGATGGGGGTA...CAGTGCCATTGACACTGCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR TCA 90 bp CCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCAGGTATGTGTGTGCATaGCTAACACAGAACTTGCCT +
Preference number: 2 (lower is better)
Translates to: PQLWRQNGLNSVSSLLCPRYVCA*LTQNLP
Trigger: AGGCAAGTTCTGTGTTAGTCATGCACACACATACCT...GGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR TCA 90 bp CAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCGGAAGGCCCCAACACTaGGAAGAAAGCAGCAATTTG +
Preference number: 2 (lower is better)
Translates to: QNGLNSVSSLLCPWTFLGGRPQH*EESSNL
Trigger: CAAATTGCTGCTTTCTTCTCAGTGTTGGGGCCTTCC...GCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR GCA 90 bp GGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGATCCAGACCCACCTCAAGCTGCAAGGTTCCATaGCACCCCATGGCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: GNATIAWRRSEKRSRPTSSCKVP*HPMAVP
Trigger: TGGGACAGCCATGGGGTGGCATGGAACCTTGCAGCT...TGAGGTGGGTCTGGATCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
3UTR-3UTR CCA 90 bp GAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTAAGTCTGGCACCAGCTaGCCAACCCCCAAAATCTCA +
Preference number: 2 (lower is better)
Translates to: EAERAELCIIPPLPLDILKSGTS*PTPKIS
Trigger: TGAGATTTTGGGGGTTGGCCAGCTGGTGCCAGACTT...AAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR TCA 90 bp GAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTAACACAGAACTTGCCTaGAGACTGGACGGAAACTTA +
Preference number: 2 (lower is better)
Translates to: EESSNLANIWGFQGSRPANTELA*RLDGNL
Trigger: TAAGTTTCCGTCCAGTCTTCAGGCAAGTTCTGTGTT...AGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR TCA 90 bp GGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGATCCAGACCCACCTCAAGAGTGACCGGTCTATaGCACAAAGGAGCTCAGGGC +
Preference number: 2 (lower is better)
Translates to: GNATIAWRRSEKRSRPTSRVTGL*HKGAQG
Trigger: GCCCTGAGCTCCTTTGTGTCATAGACCGGTCACTCT...TGAGGTGGGTCTGGATCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
3UTR-3UTR CCA 90 bp CCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCAATGCAACCATAGCATaGAGACGCTCTGAGAAAAGA +
Preference number: 2 (lower is better)
Translates to: PQLWRQNGLNSVSSLLCPNATIA*RRSEKR
Trigger: TCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATT...GGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
3UTR-3UTR TCA 90 bp CAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCAACACAGAACTTGCCTaGAGACTGGACGGAAACTTA +
Preference number: 2 (lower is better)
Translates to: QNGLNSVSSLLCPWTFLGNTELA*RLDGNL
Trigger: TAAGTTTCCGTCCAGTCTTCAGGCAAGTTCTGTGTT...GCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR TCA 90 bp ACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCAGGTATGTGTGTGCATaGCTAACACAGAACTTGCCT +
Preference number: 2 (lower is better)
Translates to: TEKKAAIWPTSGGSRGAGRYVCA*LTQNLP
Trigger: AGGCAAGTTCTGTGTTAGTCATGCACACACATACCT...GCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR TCA 90 bp CTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCAGTGTCAATGGCACTGCTGAATTCAGCCTCTTaGATCAGAAGGCGGTTCTCA +
Preference number: 2 (lower is better)
Translates to: LYHPSFAPGHSWAVSMALLNSAS*IRRRFS
Trigger: TGAGAACCGCCTTCTGATTCAAGAGGCTGAATTCAG...CAGTGCCATTGACACTGCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR CCA 90 bp GAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTAGGCGGTTCTCAAATTaGGCTGAGCGCATTGCTAAA +
Preference number: 2 (lower is better)
Translates to: EAERAELCIIPPLPLDILRRFSN*AERIAK
Trigger: TTTAGCAATGCGCTCAGCCCAATTTGAGAACCGCCT...AAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR GCA 90 bp TCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGATCGGCAGAGGGCAGCTaGAAGGTTCCATGCCACCCC +
Preference number: 2 (lower is better)
Translates to: SFIENGNATIAWRRSEKRSAEGS*KVPCHP
Trigger: GGGGTGGCATGGAACCTTGCAGCTGCCCTCTGCCGA...TCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
3UTR-3UTR TCA 90 bp GTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAAACACAGAACTTGCCTaGAGACTGGACGGAAACTTA +
Preference number: 2 (lower is better)
Translates to: VARVPRAGAILCKLQGFINTELA*RLDGNL
Trigger: TAAGTTTCCGTCCAGTCTTCAGGCAAGTTCTGTGTT...TATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR TCA 90 bp TCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGAGGAGGCAGAACGGGCTaGACTCTGTATCATCCCTCC +
Preference number: 2 (lower is better)
Translates to: SFIENGNATIAWRRSEKRGGRTG*TLYHPS
Trigger: GGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCC...TCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
3UTR-3UTR CCA 90 bp TCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGAGCCCCTGGACATTCTTaGGCAGTGTCAATGGCACTG +
Preference number: 2 (lower is better)
Translates to: SFIENGNATIAWRRSEKRAPGHS*AVSMAL
Trigger: CAGTGCCATTGACACTGCCCAAGAATGTCCAGGGGC...TCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
3UTR-3UTR TCA 90 bp TCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGAGCAAAATGCAAGGCATaGAATGGGGAGGGTGTCCCT +
Preference number: 2 (lower is better)
Translates to: SFIENGNATIAWRRSEKRAKCKA*NGEGVP
Trigger: AGGGACACCCTCCCCATTTCATGCCTTGCATTTTGC...TCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
3UTR-3UTR CCA 90 bp AATTCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAACAGCCCAAAGAGAACTaGGGCCCTGATACAGGACAG +
Preference number: 2 (lower is better)
Translates to: NSFIENGNATIAWRRSEKQPKEN*GPDTGQ
Trigger: CTGTCCTGTATCAGGGCCCCAGTTCTCTTTGGGCTG...TTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
3UTR-3UTR TCA 90 bp TCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGAGGAAGGCCCCAACACTaGGAAGAAAGCAGCAATTTG +
Preference number: 2 (lower is better)
Translates to: SFIENGNATIAWRRSEKRGRPQH*EESSNL
Trigger: CAAATTGCTGCTTTCTTCTCAGTGTTGGGGCCTTCC...TCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
3UTR-3UTR TCA 90 bp AATTCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAGATGGGATGAAGAGGTaGCCTCTGAATTCAGCCTCT +
Preference number: 2 (lower is better)
Translates to: NSFIENGNATIAWRRSEKDGMKR*PLNSAS
Trigger: AGAGGCTGAATTCAGAGGTCACCTCTTCATCCCATC...TTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
3UTR-3UTR CCA 90 bp TCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGAAGGCGGTTCTCAAATTaGGCTGAGCGCATTGCTAAA +
Preference number: 2 (lower is better)
Translates to: SFIENGNATIAWRRSEKRRRFSN*AERIAK
Trigger: TTTAGCAATGCGCTCAGCCCAATTTGAGAACCGCCT...TCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
3UTR-3UTR TCA 90 bp TCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGAAGGTATGTGTGTGCATaGCTAACACAGAACTTGCCT +
Preference number: 2 (lower is better)
Translates to: SFIENGNATIAWRRSEKRRYVCA*LTQNLP
Trigger: AGGCAAGTTCTGTGTTAGTCATGCACACACATACCT...TCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
3UTR GCA 72 bp TTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTaGTCCTCGGCAGAGGGCAGCTGCAAGGTTCCATGC +
Preference number: 3 (lower is better)
Translates to: FGQHLGVPGEQA*SSAEGSCKVPC
Trigger: GCATGGAACCTTGCAGCTGCCCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
3UTR TCA 72 bp AGCGGTGCTGGGACTCATCCCCACAGCACGACAGAGTaGCCGGTCTATGACACAAAGGAGCTCAGGGCCCCT +
Preference number: 3 (lower is better)
Translates to: SGAGTHPHSTTE*PVYDTKELRAP
Trigger: AGGGGCCCTGAGCTCCTTTGTGTCATAGACCGGTCACTCTGTCGTGCTGTGGGGATGAGTCCCAGCACCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
3UTR GCA 72 bp GCCCTGAGCACAGGTCAGAGGGAAGAGAATACGCACTaGCCCAGGCCCCTTGCAGGCCTTAGCACCAAAAGT +
Preference number: 3 (lower is better)
Translates to: ALSTGQREENTH*PRPLAGLSTKS
Trigger: ACTTTTGGTGCTAAGGCCTGCAAGGGGCCTGGGGCAGTGCGTATTCTCTTCCCTCTGACCTGTGCTCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR CAA 90 bp GAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGCCACCAGCTGGGGTTaGGCAAGACTAAGGGCCTGG +
Preference number: 3 (lower is better)
Translates to: EAERAELCIIPPLPLDILATSWG*ARLRAW
Trigger: CCAGGCCCTTAGTCTTGCCAAACCCCAGCTGGTGGC...AAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR CAA 90 bp CCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCGAAGAAAGCAGCAATTaGGCCAACATCTGGGGGTTC +
Preference number: 3 (lower is better)
Translates to: PQLWRQNGLNSVSSLLCPEESSN*ANIWGF
Trigger: GAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTC...GGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR TCA 72 bp GACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTaGAGCCCCTTTAGTATCCAGGTCGTCATCCAGTGT +
Preference number: 3 (lower is better)
Translates to: DWARRGKQHIPS*SPFSIQVVIQC
Trigger: ACACTGGATGACGACCTGGATACTAAAGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278951.11
3UTR GCA 72 bp AGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTaGCCCTGGACATTCTTGGGCAGTGTCAATGGCACT +
Preference number: 3 (lower is better)
Translates to: RQNGLNSVSSLL*PWTFLGSVNGT
Trigger: AGTGCCATTGACACTGCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR CAA 90 bp ATCCTTCCTCTTGCAAAGGGACAAATGGAGAGCCAAAGGACAGGGGCCCATGGAGAAGAAAGCAGCAATTaGGCCAACATCTGGGGGTTC +
Preference number: 3 (lower is better)
Translates to: ILPLAKGQMESQRTGAHGEESSN*ANIWGF
Trigger: GAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTC...TCCATGGGCCCCTGTCCTTTGGCTCTCCATTTGTCCCTTTGCAAGAGGAAGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
3UTR-3UTR CAA 90 bp CAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCTCTGAATTCAGCCTCTaGAATCAGAAGGCGGTTCTC +
Preference number: 3 (lower is better)
Translates to: QNGLNSVSSLLCPWTFLGSEFSL*NQKAVL
Trigger: GAGAACCGCCTTCTGATTCAAGAGGCTGAATTCAGA...GCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
3UTR CCA 72 bp AAAGGGACAAATGGAGAGCCAAAGGACAGGGGCCCATaGAAGGCCCCAACACTGAGAAGAAAGCAGCAATTT +
Preference number: 3 (lower is better)
Translates to: KGTNGEPKDRGP*KAPTLRRKQQF
Trigger: AAATTGCTGCTTTCTTCTCAGTGTTGGGGCCTTCCATGGGCCCCTGTCCTTTGGCTCTCCATTTGTCCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp AGGTGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGAGGGGAGGCGCCGCTTaGACTGGTCGTGCCCCTGGT +
Preference number: 4 (lower is better)
Translates to: RWDEGDPRTRVARVPRAGRGGAA*TGRAPG
Trigger: ACCAGGGGCACGACCAGTTCAAGCGGCGCCTCCCCT...CCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000278951.11
CDS-3UTR CCA 90 bp TGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAGAGCCCCCGCAGGCTTaGTCTTCGGTCTTCACCACC +
Preference number: 4 (lower is better)
Translates to: WDEGDPRTRVARVPRAGAEPPQA*SSVFTT
Trigger: GGTGGTGAAGACCGAAGACCAAGCCTGCGGGGGCTC...TGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp AGGTGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGATCCAAGGACCAGGGTaGCCAGGGTGCCCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: RWDEGDPRTRVARVPRAGIQGPG*PGCPEL
Trigger: CAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGAT...CCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp TGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCACCTCAGCATCTGGGGTaGACCAGGTGGGACGAAGGG +
Preference number: 4 (lower is better)
Translates to: WDEGDPRTRVARVPRAGAPQHLG*TRWDEG
Trigger: CCCTTCGTCCCACCTGGTCCACCCCAGATGCTGAGG...TGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp AGGTGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGCCCATCCTCAGCATCTaGGGTGGACCAGGTGGGACG +
Preference number: 4 (lower is better)
Translates to: RWDEGDPRTRVARVPRAGPILSI*GGPGGT
Trigger: CGTCCCACCTGGTCCACCCCAGATGCTGAGGATGGG...CCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp TGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAAGAGCACGTGGAGGATaGGGCGGAAGATCCCCGAGT +
Preference number: 4 (lower is better)
Translates to: WDEGDPRTRVARVPRAGARARGG*GGRSPS
Trigger: ACTCGGGGATCTTCCGCCGCATCCTCCACGTGCTCT...TGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp AGGTGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGATGCAGTCCCGGTTGTaGTCCCTCGACTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: RWDEGDPRTRVARVPRAGMQSRL*SLDSAG
Trigger: CCCTGCAGAGTCGAGGGAGCACAACCGGGACTGCAT...CCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp TGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAAGCAGGGCCCGGTTGTaGTTGATCTCCCGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: WDEGDPRTRVARVPRAGASRARL*LISRCR
Trigger: CCTGCAACGGGAGATCAACCACAACCGGGCCCTGCT...TGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp ACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCGCTGCCATCCAGTGCTaGGCAGCGGTGCTGGGACTC +
Preference number: 4 (lower is better)
Translates to: TKGIQGPGWPGCPELGQFAAIQC*AAVLGL
Trigger: GAGTCCCAGCACCGCTGCCCAGCACTGGATGGCAGC...GAATTGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp AGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGGAGCTCAGGGCCCCTTaGGGTGAAGCGAAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: SNLANIWGFQGSRPAPRQELRAP*GEAKGP
Trigger: TGGGCCCTTCGCTTCACCTCAAGGGGCCCTGAGCTC...CTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp AGGTGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGAACTCGGCGTCTTTCTaGGAGACGTTCTTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: RWDEGDPRTRVARVPRAGNSASF*ETFLGP
Trigger: GGGGCCCAAGAACGTCTCGCAGAAAGACGCCGAGTT...CCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp ACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCGGGCACAGAGGTCATTaGGCAGCAGGGCCCGGTTGT +
Preference number: 4 (lower is better)
Translates to: TKGIQGPGWPGCPELGQFGHRGH*AAGPGC
Trigger: ACAACCGGGCCCTGCTGCGCAATGACCTCTGTGCCC...GAATTGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp AGGTGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGAGAAGTCGAGGAGGATaGAGTCCCGGTTGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: RWDEGDPRTRVARVPRAGRSRGG*SPGCAP
Trigger: GGGAGCACAACCGGGACTGCATCCTCCTCGACTTCT...CCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp GCACGACAGAGTGACCGGTCTATGACACAAAGGAGCTCAGGGCCCCTTGAGGTGAGGAGGGCGGCTGGTTaGCGGGAGCCTGGAGACGCC +
Preference number: 4 (lower is better)
Translates to: ARQSDRSMTQRSSGPLEVRRAAG*REPGDA
Trigger: GGCGTCTCCAGGCTCCCGGCAACCAGCCGCCCTCCT...CACCTCAAGGGGCCCTGAGCTCCTTTGTGTCATAGACCGGTCACTCTGTCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324225.9
CDS-3UTR CCA 90 bp TGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAAGGATTAGGGGCACCTaGAAGGACACCACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: WDEGDPRTRVARVPRAGARIRGT*KDTTAS
Trigger: GGAGGCTGTGGTGTCCTTCCAGGTGCCCCTAATCCT...TGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp TGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCACCGACTCATTCTTGGTaGGGGGCTGACACAGGGTTC +
Preference number: 4 (lower is better)
Translates to: WDEGDPRTRVARVPRAGAPTHSW*GADTGF
Trigger: GAACCCTGTGTCAGCCCCCCACCAAGAATGAGTCGG...TGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp TGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCACGGCTGACCCGGAGCTaGTATGTGGTGTTGACTGGT +
Preference number: 4 (lower is better)
Translates to: WDEGDPRTRVARVPRAGARLTRS*YVVLTG
Trigger: ACCAGTCAACACCACATACCAGCTCCGGGTCAGCCG...TGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp ACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCCCCATCCTCAGCATCTaGGGTGGACCAGGTGGGACG +
Preference number: 4 (lower is better)
Translates to: TKGIQGPGWPGCPELGQFPILSI*GGPGGT
Trigger: CGTCCCACCTGGTCCACCCCAGATGCTGAGGATGGG...GAATTGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp ACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTACCCGACGCCGTGCTaGGCTGCGAGTTTTCCGAGG +
Preference number: 4 (lower is better)
Translates to: TKGIQGPGWPGCPELGQFYPTPC*AASFPR
Trigger: CCTCGGAAAACTCGCAGCCCAGCACGGCGTCGGGTA...GAATTGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324225.9
CDS-3UTR CCA 90 bp AATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGGGAGGGAGGGGATGCTaGCTACGGGAAGGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: NLANIWGFQGSRPAPRQRGGRGC*LREGVP
Trigger: TGGGACCCCTTCCCGTAGCCAGCATCCCCTCCCTCC...CCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000324225.9
CDS-3UTR TCA 90 bp ATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGGAATCGTCCATGCGGCTaGCCCGGAGCTGGTATGTGG +
Preference number: 4 (lower is better)
Translates to: IWPTSGGSRGAGLLLGRGNRPCG*PGAGMW
Trigger: CCACATACCAGCTCCGGGTCAGCCGCATGGACGATT...CCCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp TGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCACGTATGCCTCAGACGTaGCTGCTTGAGACACCAGCA +
Preference number: 4 (lower is better)
Translates to: WDEGDPRTRVARVPRAGARMPQT*LLETPA
Trigger: TGCTGGTGTCTCAAGCAGTCACGTCTGAGGCATACG...TGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp ACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCCCACCGTCTGGTAGGTaGTCACCAGCTGCACCACAG +
Preference number: 4 (lower is better)
Translates to: TKGIQGPGWPGCPELGQFPPSGR*SPAAPQ
Trigger: CTGTGGTGCAGCTGGTGATCACCTACCAGACGGTGG...GAATTGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp AATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGTGTAGGCGCTGGCGTTaGTGTCCGGGTGCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: NLANIWGFQGSRPAPRQRCRRWR*CPGAAS
Trigger: AGAAGCGGCACCCGGACATCAACGCCAGCGCCTACA...CCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp AGGTGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGCATCAGTCTGGGAGCTaGTGGGATGAAGAGGTGACC +
Preference number: 4 (lower is better)
Translates to: RWDEGDPRTRVARVPRAGHQSGS*WDEEVT
Trigger: GGTCACCTCTTCATCCCATCAGCTCCCAGACTGATG...CCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp AGGTGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGAACGGCGCCCCCTTCTaGTTGTTCAGGACGTTCACA +
Preference number: 4 (lower is better)
Translates to: RWDEGDPRTRVARVPRAGNGAPF*LFRTFT
Trigger: TGTGAACGTCCTGAACAAGCAGAAGGGGGCGCCGTT...CCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp ACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCATGGCAATGCACAGCTaGCGCATCTGGCCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: TKGIQGPGWPGCPELGQFMAMHS*RIWPEG
Trigger: CCCCTCTGGCCAGATGCGGCAGCTGTGCATTGCCAT...GAATTGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278951.11
CDS-3UTR GCA 90 bp TGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAACGCTTGTCCTTCCGTaGCAGGTCAGCCACATAGAG +
Preference number: 4 (lower is better)
Translates to: WDEGDPRTRVARVPRAGATLVLP*QVSHIE
Trigger: CTCTATGTGGCTGACCTGGCACGGAAGGACAAGCGT...TGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp AGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGTCGGCAGAGGGCAGCTaGAAGGTTCCATGCCACCCC +
Preference number: 4 (lower is better)
Translates to: SNLANIWGFQGSRPAPRQSAEGS*KVPCHP
Trigger: GGGGTGGCATGGAACCTTGCAGCTGCCCTCTGCCGA...CTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp AATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGCCTCCACAGAGCTCATaGAGTCCACTCGGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: NLANIWGFQGSRPAPRQRPPQSS*SPLGAE
Trigger: CTCGGCCCCGAGTGGACTCCATGAGCTCTGTGGAGG...CCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp GCCCTGAGCACAGGTCAGAGGGAAGAGAATACGCACTGCCCCAGGCCCCTTGCACCTCCACAGAGCTCATaGAGTCCACTCGGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: ALSTGQREENTHCPRPLAPPQSS*SPLGAE
Trigger: CTCGGCCCCGAGTGGACTCCATGAGCTCTGTGGAGG...TGCAAGGGGCCTGGGGCAGTGCGTATTCTCTTCCCTCTGACCTGTGCTCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp ACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCAGCAGGGCCCGGTTGTaGTTGATCTCCCGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: TKGIQGPGWPGCPELGQFSRARL*LISRCR
Trigger: CCTGCAACGGGAGATCAACCACAACCGGGCCCTGCT...GAATTGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp AGGTGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGGAAGGACCCGAACATaGCGATGGAGGAGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: RWDEGDPRTRVARVPRAGGRTRT*RWRRGS
Trigger: ACTTCCTCTCCTCCATCGCCATGTTCGGGTCCTTCC...CCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GCACGACAGAGTGACCGGTCTATGACACAAAGGAGCTCAGGGCCCCTTGAGGTGGAAGGCCCAGCCAGCTaGTCCCCACTCTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: ARQSDRSMTQRSSGPLEVEGPAS*SPLSPG
Trigger: CCCAGGGGAGAGTGGGGACCAGCTGGCTGGGCCTTC...CACCTCAAGGGGCCCTGAGCTCCTTTGTGTCATAGACCGGTCACTCTGTCGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532062.1
CDS-3UTR TCA 90 bp GCCCTGAGCACAGGTCAGAGGGAAGAGAATACGCACTGCCCCAGGCCCCTTGCAAATCGTCCATGCGGCTaGCCCGGAGCTGGTATGTGG +
Preference number: 4 (lower is better)
Translates to: ALSTGQREENTHCPRPLANRPCG*PGAGMW
Trigger: CCACATACCAGCTCCGGGTCAGCCGCATGGACGATT...TGCAAGGGGCCTGGGGCAGTGCGTATTCTCTTCCCTCTGACCTGTGCTCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp TGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCACAGGGAACTCATACTTaGAGTACTGGGGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: WDEGDPRTRVARVPRAGAQGTHT*STGAVL
Trigger: CAGCACAGCCCCAGTACTTCAAGTATGAGTTCCCTG...TGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp TGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCACAGCACATCCCTTCCTaGAGCCCCTTTAGTATCCAG +
Preference number: 4 (lower is better)
Translates to: WDEGDPRTRVARVPRAGAQHIPS*SPFSIQ
Trigger: CTGGATACTAAAGGGGCTTCAGGAAGGGATGTGCTG...TGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000278951.11
CDS-3UTR TCA 90 bp AGGTGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGAGCATGGAGACGCTCTaGGAAAAGATCCAGACCCAC +
Preference number: 4 (lower is better)
Translates to: RWDEGDPRTRVARVPRAGSMETL*EKIQTH
Trigger: GTGGGTCTGGATCTTTTCTCAGAGCGTCTCCATGCT...CCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp AGGTGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAAAATGCAAGGCATaGAATGGGGAGGGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: RWDEGDPRTRVARVPRAGAKCKA*NGEGVP
Trigger: AGGGACACCCTCCCCATTTCATGCCTTGCATTTTGC...CCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp CAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGAAGGAAGGGAAGGGGTaGGGCGCTTCTCCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: QFGQHLGVPGEQACSSAEKEGKG*GASPSS
Trigger: ACTGGAGGGAGAAGCGCCTCACCCCTTCCCTTCCTT...CTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp ATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGGAACTCGGCGTCTTTCTaGGAGACGTTCTTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: IWPTSGGSRGAGLLLGRGNSASF*ETFLGP
Trigger: GGGGCCCAAGAACGTCTCGCAGAAAGACGCCGAGTT...CCCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp TGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAGACCGGTTCATCTTCTaGGAAGGGGTAGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: WDEGDPRTRVARVPRAGADRFIF*EGVERQ
Trigger: CTGCCTTTCTACCCCTTCGCAGAAGATGAACCGGTC...TGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp AGGTGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGCATCCCACTGACGTATaGCTCAGACGTGACTGCTTG +
Preference number: 4 (lower is better)
Translates to: RWDEGDPRTRVARVPRAGHPTDV*LRRDCL
Trigger: CAAGCAGTCACGTCTGAGGCATACGTCAGTGGGATG...CCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp TGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAAGGGTCTTCTTCTTCTaGCTCCAGTTCTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: WDEGDPRTRVARVPRAGARVFFF*LQFSQQ
Trigger: CTGCTGGGAGAACTGGAGGCAGAAGAAGAAGACCCT...TGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp AGGTGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGAGGGTCTTCTTCTTCTaGCTCCAGTTCTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RWDEGDPRTRVARVPRAGRVFFF*LQFSQQ
Trigger: CTGCTGGGAGAACTGGAGGCAGAAGAAGAAGACCCT...CCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp TGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAGGAGCAGGTTGCAGATaGCAATGGCCAACAAGTAGG +
Preference number: 4 (lower is better)
Translates to: WDEGDPRTRVARVPRAGAGAGCR*QWPTSR
Trigger: CCTACTTGTTGGCCATTGGCATCTGCAACCTGCTCC...TGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp AGGTGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGATGGAGGAGAGGAAGTaGCAGATGTCGTGGTCGTCA +
Preference number: 4 (lower is better)
Translates to: RWDEGDPRTRVARVPRAGMEERK*QMSWSS
Trigger: TGACGACCACGACATCTGGCACTTCCTCTCCTCCAT...CCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp CCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCGACGCCGTGCTGGGCTaGGAGTTTTCCGAGGTGCGG +
Preference number: 4 (lower is better)
Translates to: PQLWRQNGLNSVSSLLCPDAVLG*EFSEVR
Trigger: CCGCACCTCGGAAAACTCGCAGCCCAGCACGGCGTC...GGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324225.9
CDS-3UTR GCA 90 bp GGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCAACCTCCGGGACGGGTTaGGGCTGCGGCCGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GWPGCPELGQFFVNSKVSTSGTG*GCGRSF
Trigger: GAAGCTGCGGCCGCAGCCGCAACCCGTCCCGGAGGT...TGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324225.9
CDS-3UTR GCA 90 bp ACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCAGCTGCAAGGTTCCATaGCACCCCATGGCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: TKGIQGPGWPGCPELGQFSCKVP*HPMAVP
Trigger: TGGGACAGCCATGGGGTGGCATGGAACCTTGCAGCT...GAATTGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp AGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGTCCCTCCAGTCCTGGTaGTGGCATCAGTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: SNLANIWGFQGSRPAPRQSLQSW*WHQSGS
Trigger: GCTCCCAGACTGATGCCAGCACCAGGACTGGAGGGA...CTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp TGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAGTATCATCCCTCCTTTaGCCCTGGACATTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: WDEGDPRTRVARVPRAGAVSSLL*PWTFLG
Trigger: GCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATAC...TGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp ATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGGCCGACTCATTCTTGGTaGGGGGCTGACACAGGGTTC +
Preference number: 4 (lower is better)
Translates to: IWPTSGGSRGAGLLLGRGPTHSW*GADTGF
Trigger: GAACCCTGTGTCAGCCCCCCACCAAGAATGAGTCGG...CCCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp GGGGTGCCCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTGAGCCCCCGCAGGCTTaGTCTTCGGTCTTCACCACC +
Preference number: 4 (lower is better)
Translates to: GVPTAVEAERAELCIIPPEPPQA*SSVFTT
Trigger: GGTGGTGAAGACCGAAGACCAAGCCTGCGGGGGCTC...AGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGGGCACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp AGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGGGCAGGCTCGGTCAATaGCCACCAGCAGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: SNLANIWGFQGSRPAPRQGRLGQ*PPAGSS
Trigger: AGAAGACCCTGCTGGTGGCCATTGACCGAGCCTGCC...CTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp AATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGAGGGTGACCGCTTTCTaGGCAGGCTCGGTCAATGGC +
Preference number: 4 (lower is better)
Translates to: NLANIWGFQGSRPAPRQRRVTAF*AGSVNG
Trigger: GCCATTGACCGAGCCTGCCCAGAAAGCGGTCACCCT...CCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324225.9
ENST00000620360.4
CDS-3UTR CCA 90 bp AATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGAGCAGGGCCCGGTTGTaGTTGATCTCCCGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: NLANIWGFQGSRPAPRQRSRARL*LISRCR
Trigger: CCTGCAACGGGAGATCAACCACAACCGGGCCCTGCT...CCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp GAGGCTAGGACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTGAAGCCCCTTGGTTGCCGGGAGCCTaGAGACGCCGGGAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: EARTGHVEGNSTSLPEAPWLPGA*RRRERG
Trigger: TCCCCTTTCCCGGCGTCTCCAGGCTCCCGGCAACCA...AGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTCCTAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324225.9
CDS-3UTR CCA 90 bp GGGGTGCCCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTGGGTGCCCACAGCTGTaGAGGCAGAACGGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: GVPTAVEAERAELCIIPPGCPQL*RQNGLN
Trigger: GTTCAGCCCGTTCTGCCTCCACAGCTGTGGGCACCC...AGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGGGCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GCACGACAGAGTGACCGGTCTATGACACAAAGGAGCTCAGGGCCCCTTGAGGTGCCCCAAGGCAGCCAGTaGCTGACCGAGTCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: ARQSDRSMTQRSSGPLEVPQGSQ*LTESPA
Trigger: AGCTGGGGACTCGGTCAGCCACTGGCTGCCTTGGGG...CACCTCAAGGGGCCCTGAGCTCCTTTGTGTCATAGACCGGTCACTCTGTCGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532062.1
CDS-3UTR TCA 90 bp CAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGCTTTGCGCTGTACGGTaGTGGCCGCCTTCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: QFGQHLGVPGEQACSSAELCAVR*WPPSWS
Trigger: TGACCAAGAAGGCGGCCATCACCGTACAGCGCAAAG...CTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp GCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGACTTTGCGCTGTACGGTaGTGGCCGCCTTCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: AIWPTSGGSRGAGLLLGRLCAVR*WPPSWS
Trigger: TGACCAAGAAGGCGGCCATCACCGTACAGCGCAAAG...TCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp ATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGGTCAGACGTGACTGCTTaGGACACCAGCACTGACAGG +
Preference number: 4 (lower is better)
Translates to: IWPTSGGSRGAGLLLGRGSDVTA*DTSTDR
Trigger: CCTGTCAGTGCTGGTGTCTCAAGCAGTCACGTCTGA...CCCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp ACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCGCACAGAGAAGAAGATaGCAATGGCCAGGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: TKGIQGPGWPGCPELGQFAQRRR*QWPGRR
Trigger: ACGCCTGCCTGGCCATTGTCATCTTCTTCTCTGTGC...GAATTGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp CTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCAGTGTCAATGGCACTGGGGCTGAGTACGACCTaGGACCCTGGAGCCCCGGGC +
Preference number: 4 (lower is better)
Translates to: LYHPSFAPGHSWAVSMALGLSTT*DPGAPG
Trigger: GCCCGGGGCTCCAGGGTCTCAGGTCGTACTCAGCCC...CAGTGCCATTGACACTGCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324225.9
CDS-3UTR TCA 90 bp GAGGAGGACGGGCAAAATGCAAGGCATGAAATGGGGAGGGTGTCCCTTCCATCCCAGCTCGCGAGGGGCTaGGTACGACCTGAGACCCTG +
Preference number: 4 (lower is better)
Translates to: EEDGQNARHEMGRVSLPSQLARG*VRPETL
Trigger: CAGGGTCTCAGGTCGTACTCAGCCCCTCGCGAGCTG...GGATGGAAGGGACACCCTCCCCATTTCATGCCTTGCATTTTGCCCGTCCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324225.9
CDS-3UTR TCA 90 bp CAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCCAGGGCCCCTTGAGGTaGAGCGAAGGGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QNGLNSVSSLLCPWTFLGQGPLR*SEGPSS
Trigger: GGAGCTGGGCCCTTCGCTTCACCTCAAGGGGCCCTG...GCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp ACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCAGGGCCCCTTGAGGTaGAGCGAAGGGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TEKKAAIWPTSGGSRGAGQGPLR*SEGPSS
Trigger: GGAGCTGGGCCCTTCGCTTCACCTCAAGGGGCCCTG...GCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp TGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAGGAAGGCCCCAACACTaGGAAGAAAGCAGCAATTTG +
Preference number: 4 (lower is better)
Translates to: WDEGDPRTRVARVPRAGAGRPQH*EESSNL
Trigger: CAAATTGCTGCTTTCTTCTCAGTGTTGGGGCCTTCC...TGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp AATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGCCCATCCATCCTGGCTaGCTGGAATGGGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: NLANIWGFQGSRPAPRQRPIHPG*LEWAVM
Trigger: CATCACTGCCCATTCCAGTCAGCCAGGATGGATGGG...CCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp GCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGACAGTGTCAATGGCACTaGAAGGCCACCAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: AIWPTSGGSRGAGLLLGRQCQWH*KATSWG
Trigger: ACCCCAGCTGGTGGCCTTTCAGTGCCATTGACACTG...TCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp GCCCTGAGCACAGGTCAGAGGGAAGAGAATACGCACTGCCCCAGGCCCCTTGCAGGAGGCAGAACGGGCTaGACTCTGTATCATCCCTCC +
Preference number: 4 (lower is better)
Translates to: ALSTGQREENTHCPRPLAGGRTG*TLYHPS
Trigger: GGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCC...TGCAAGGGGCCTGGGGCAGTGCGTATTCTCTTCCCTCTGACCTGTGCTCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp CAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGCCCTGGCAAGAGGGATaGAGGGTGGTGAAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: QFGQHLGVPGEQACSSAEPWQEG*RVVKQE
Trigger: TTCCTGCTTCACCACCCTTCATCCCTCTTGCCAGGG...CTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532062.1
CDS-3UTR GCA 90 bp GCCCTGAGCACAGGTCAGAGGGAAGAGAATACGCACTGCCCCAGGCCCCTTGCAAAGAGAGGTCCCCAGTaGCAGCGCTGTCAACCAGAC +
Preference number: 4 (lower is better)
Translates to: ALSTGQREENTHCPRPLAKRGPQ*QRCQPD
Trigger: GTCTGGTTGACAGCGCTGGCACTGGGGACCTCTCTT...TGCAAGGGGCCTGGGGCAGTGCGTATTCTCTTCCCTCTGACCTGTGCTCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp ACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCCCATCATCAGGGCTGTaGCCATGGCGTAGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: TKGIQGPGWPGCPELGQFPSSGL*PWRRKA
Trigger: GGCTTTTCTACGCCATGGGCACAGCCCTGATGATGG...GAATTGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAACGCCGTGTTCCCTTTaGCAAAGACCACGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: AIWPTSGGSRGAGLLLGRTPCSL*QRPRPA
Trigger: TGCTGGGCGTGGTCTTTGGCAAAGGGAACACGGCGT...TCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCGTAGAGCGGCCCGCTaGACTGCCGGATGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: EESSNLANIWGFQGSRPARRAAR*TAGCSL
Trigger: CAGACTGCATCCGGCAGTGCAGCGGGCCGCTCTACG...AGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000620360.4
CDS-3UTR GCA 90 bp AATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGGTGCTCCCTCGACTCTaGAGGGGTTTTCTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: NLANIWGFQGSRPAPRQRVLPRL*RGFLPG
Trigger: ACCTGGCAGAAAACCCCTGCAGAGTCGAGGGAGCAC...CCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp GCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGTGCTCCCTCGACTCTaGAGGGGTTTTCTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: AIWPTSGGSRGAGLLLGRVLPRL*RGFLPG
Trigger: ACCTGGCAGAAAACCCCTGCAGAGTCGAGGGAGCAC...TCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp AGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGCTGCAAGGTTCCATaGCACCCCATGGCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: SNLANIWGFQGSRPAPRQSCKVP*HPMAVP
Trigger: TGGGACAGCCATGGGGTGGCATGGAACCTTGCAGCT...CTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp AATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGAGCTGCAAGGTTCCATaGCACCCCATGGCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: NLANIWGFQGSRPAPRQRSCKVP*HPMAVP
Trigger: TGGGACAGCCATGGGGTGGCATGGAACCTTGCAGCT...CCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp GCACGACAGAGTGACCGGTCTATGACACAAAGGAGCTCAGGGCCCCTTGAGGTGTCGGCAGAGGGCAGCTaGAAGGTTCCATGCCACCCC +
Preference number: 4 (lower is better)
Translates to: ARQSDRSMTQRSSGPLEVSAEGS*KVPCHP
Trigger: GGGGTGGCATGGAACCTTGCAGCTGCCCTCTGCCGA...CACCTCAAGGGGCCCTGAGCTCCTTTGTGTCATAGACCGGTCACTCTGTCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp GGGGTGCCCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTCCCTCCAGTCCTGGTaGTGGCATCAGTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: GVPTAVEAERAELCIIPPSLQSW*WHQSGS
Trigger: GCTCCCAGACTGATGCCAGCACCAGGACTGGAGGGA...AGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGGGCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp CAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGCCGACTCATTCTTGGTaGGGGGCTGACACAGGGTTC +
Preference number: 4 (lower is better)
Translates to: QFGQHLGVPGEQACSSAEPTHSW*GADTGF
Trigger: GAACCCTGTGTCAGCCCCCCACCAAGAATGAGTCGG...CTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp GAGGCTAGGACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTGAAGCCCCTGAGCCCCCGCAGGCTTaGTCTTCGGTCTTCACCACC +
Preference number: 4 (lower is better)
Translates to: EARTGHVEGNSTSLPEAPEPPQA*SSVFTT
Trigger: GGTGGTGAAGACCGAAGACCAAGCCTGCGGGGGCTC...AGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTCCTAGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp AGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGGCTGAGATTGCCCAGTaGGTGGGCGCAGAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: SNLANIWGFQGSRPAPRQAEIAQ*VGAEEV
Trigger: AACTTCCTCTGCGCCCACCCACTGGGCAATCTCAGC...CTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp GGGGTGCCCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTAGCAGGGCCCGGTTGTaGTTGATCTCCCGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: GVPTAVEAERAELCIIPPSRARL*LISRCR
Trigger: CCTGCAACGGGAGATCAACCACAACCGGGCCCTGCT...AGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGGGCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp TGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAGGTTGCAGATGCCAATaGCCAACAAGTAGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: WDEGDPRTRVARVPRAGAGCRCQ*PTSRKR
Trigger: TCGCTTCCTACTTGTTGGCCATTGGCATCTGCAACC...TGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTGCTGGGCAGCGGTGCTaGGACTCATCCCCACAGCAC +
Preference number: 4 (lower is better)
Translates to: EESSNLANIWGFQGSRPAAGQRC*DSSPQH
Trigger: GTGCTGTGGGGATGAGTCCCAGCACCGCTGCCCAGC...AGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GAGGAGGACGGGCAAAATGCAAGGCATGAAATGGGGAGGGTGTCCCTTCCATCCGCTGGGCAGCGGTGCTaGGACTCATCCCCACAGCAC +
Preference number: 4 (lower is better)
Translates to: EEDGQNARHEMGRVSLPSAGQRC*DSSPQH
Trigger: GTGCTGTGGGGATGAGTCCCAGCACCGCTGCCCAGC...GGATGGAAGGGACACCCTCCCCATTTCATGCCTTGCATTTTGCCCGTCCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp AATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGAAGGACAGGGGCCCATaGAAGGCCCCAACACTGAGA +
Preference number: 4 (lower is better)
Translates to: NLANIWGFQGSRPAPRQRKDRGP*KAPTLR
Trigger: TCTCAGTGTTGGGGCCTTCCATGGGCCCCTGTCCTT...CCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGATTCTCCCTCCAGTCCTaGTGCTGGCATCAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: AIWPTSGGSRGAGLLLGRFSLQS*CWHQSG
Trigger: CCCAGACTGATGCCAGCACCAGGACTGGAGGGAGAA...TCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGAGAGAAGCGCTTTCTaGGCAGGCTCGGTCAATGGC +
Preference number: 4 (lower is better)
Translates to: AIWPTSGGSRGAGLLLGRERSAF*AGSVNG
Trigger: GCCATTGACCGAGCCTGCCCAGAAAGCGCTTCTCTC...TCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431081.6
CDS-3UTR TCA 90 bp GAGGCTAGGACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTGAAGCCCCTAATCGTCCATGCGGCTaGCCCGGAGCTGGTATGTGG +
Preference number: 4 (lower is better)
Translates to: EARTGHVEGNSTSLPEAPNRPCG*PGAGMW
Trigger: CCACATACCAGCTCCGGGTCAGCCGCATGGACGATT...AGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTCCTAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp CCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCAATCGTCCATGCGGCTaGCCCGGAGCTGGTATGTGG +
Preference number: 4 (lower is better)
Translates to: PQLWRQNGLNSVSSLLCPNRPCG*PGAGMW
Trigger: CCACATACCAGCTCCGGGTCAGCCGCATGGACGATT...GGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp CAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGACTGCTCCCCAGTCCTaGGCACAAAATCGTCCATGC +
Preference number: 4 (lower is better)
Translates to: QFGQHLGVPGEQACSSAETAPQS*AQNRPC
Trigger: GCATGGACGATTTTGTGCTCAGGACTGGGGAGCAGT...CTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp ACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCCAGGGAACTCATACTTaGAGTACTGGGGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: TKGIQGPGWPGCPELGQFQGTHT*STGAVL
Trigger: CAGCACAGCCCCAGTACTTCAAGTATGAGTTCCCTG...GAATTGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp ACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTGTTGGAGGTCACCTTaGCAATTACCGAGTCCACGC +
Preference number: 4 (lower is better)
Translates to: TKGIQGPGWPGCPELGQFCWRSP*QLPSPR
Trigger: GCGTGGACTCGGTAATTGTCAAGGTGACCTCCAACA...GAATTGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp ATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGGGGACACAGCACATCCTaGATGGAGATGACTGAGCAG +
Preference number: 4 (lower is better)
Translates to: IWPTSGGSRGAGLLLGRGGHSTS*MEMTEQ
Trigger: CTGCTCAGTCATCTCCATTCAGGATGTGCTGTGTCC...CCCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp GCCCTGAGCACAGGTCAGAGGGAAGAGAATACGCACTGCCCCAGGCCCCTTGCATTCTGGCGGTGCCCTTaGTCGACCGGTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: ALSTGQREENTHCPRPLAFWRCP*STGSSS
Trigger: AGAAGATGAACCGGTCGATCAAGGGCACCGCCAGAA...TGCAAGGGGCCTGGGGCAGTGCGTATTCTCTTCCCTCTGACCTGTGCTCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp GCACGACAGAGTGACCGGTCTATGACACAAAGGAGCTCAGGGCCCCTTGAGGTGCCACCGTCTGGTAGGTaGTCACCAGCTGCACCACAG +
Preference number: 4 (lower is better)
Translates to: ARQSDRSMTQRSSGPLEVPPSGR*SPAAPQ
Trigger: CTGTGGTGCAGCTGGTGATCACCTACCAGACGGTGG...CACCTCAAGGGGCCCTGAGCTCCTTTGTGTCATAGACCGGTCACTCTGTCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp ATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGGTGTCCTGATTCCCTGTaGCATTCACCACCGTCTGGT +
Preference number: 4 (lower is better)
Translates to: IWPTSGGSRGAGLLLGRGCPDSL*HSPPSG
Trigger: ACCAGACGGTGGTGAATGTCACAGGGAATCAGGACA...CCCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp GAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTTGTAGGCGCTGGCGTTaGTGTCCGGGTGCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: EESSNLANIWGFQGSRPACRRWR*CPGAAS
Trigger: AGAAGCGGCACCCGGACATCAACGCCAGCGCCTACA...AGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp GAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTCAGGGCCCCTTGAGGTaGAGCGAAGGGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: EAERAELCIIPPLPLDILQGPLR*SEGPSS
Trigger: GGAGCTGGGCCCTTCGCTTCACCTCAAGGGGCCCTG...AAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp CTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCAGTGTCAATGGCACTGCAGGGCCCCTTGAGGTaGAGCGAAGGGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LYHPSFAPGHSWAVSMALQGPLR*SEGPSS
Trigger: GGAGCTGGGCCCTTCGCTTCACCTCAAGGGGCCCTG...CAGTGCCATTGACACTGCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp AGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCGAGCTCAGGGCCCCTTaGGGTGAAGCGAAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: RVARVPRAGAILCKLQGFELRAP*GEAKGP
Trigger: TGGGCCCTTCGCTTCACCTCAAGGGGCCCTGAGCTC...GAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp CAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCGAGCTCAGGGCCCCTTaGGGTGAAGCGAAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: QNGLNSVSSLLCPWTFLGELRAP*GEAKGP
Trigger: TGGGCCCTTCGCTTCACCTCAAGGGGCCCTGAGCTC...GCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp GGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCAGAGCTCAGGGCCCCTTaGGGTGAAGCGAAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GWPGCPELGQFFVNSKVSELRAP*GEAKGP
Trigger: TGGGCCCTTCGCTTCACCTCAAGGGGCCCTGAGCTC...TGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp AATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGAGAGTGACCGGTCTATaGCACAAAGGAGCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: NLANIWGFQGSRPAPRQRRVTGL*HKGAQG
Trigger: GCCCTGAGCTCCTTTGTGTCATAGACCGGTCACTCT...CCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp CAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGAGAGTGACCGGTCTATaGCACAAAGGAGCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: QFGQHLGVPGEQACSSAERVTGL*HKGAQG
Trigger: GCCCTGAGCTCCTTTGTGTCATAGACCGGTCACTCT...CTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp ACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCGCAAAATGCAAGGCATaGAATGGGGAGGGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: TKGIQGPGWPGCPELGQFAKCKA*NGEGVP
Trigger: AGGGACACCCTCCCCATTTCATGCCTTGCATTTTGC...GAATTGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp ATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGGAGAGAACTGGGGCCCTaGTACAGGACAGAGATTCAG +
Preference number: 4 (lower is better)
Translates to: IWPTSGGSRGAGLLLGRGRELGP*YRTEIQ
Trigger: CTGAATCTCTGTCCTGTATCAGGGCCCCAGTTCTCT...CCCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp GCACGACAGAGTGACCGGTCTATGACACAAAGGAGCTCAGGGCCCCTTGAGGTGGCCAGGACTCGAGGGTaGCCAAGGAGAGAAGCGCTT +
Preference number: 4 (lower is better)
Translates to: ARQSDRSMTQRSSGPLEVARTRG*PRREAL
Trigger: AAGCGCTTCTCTCCTTGGTCACCCTCGAGTCCTGGC...CACCTCAAGGGGCCCTGAGCTCCTTTGTGTCATAGACCGGTCACTCTGTCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431081.6
CDS-3UTR GCA 90 bp GCCCTGAGCACAGGTCAGAGGGAAGAGAATACGCACTGCCCCAGGCCCCTTGCAAACGGCGCCCCCTTCTaGTTGTTCAGGACGTTCACA +
Preference number: 4 (lower is better)
Translates to: ALSTGQREENTHCPRPLANGAPF*LFRTFT
Trigger: TGTGAACGTCCTGAACAAGCAGAAGGGGGCGCCGTT...TGCAAGGGGCCTGGGGCAGTGCGTATTCTCTTCCCTCTGACCTGTGCTCAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAACGCTTGTCCTTCCGTaGCAGGTCAGCCACATAGAG +
Preference number: 4 (lower is better)
Translates to: AIWPTSGGSRGAGLLLGRTLVLP*QVSHIE
Trigger: CTCTATGTGGCTGACCTGGCACGGAAGGACAAGCGT...TCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp CCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCAGAGCACGTGGAGGATaGGGCGGAAGATCCCCGAGT +
Preference number: 4 (lower is better)
Translates to: PQLWRQNGLNSVSSLLCPRARGG*GGRSPS
Trigger: ACTCGGGGATCTTCCGCCGCATCCTCCACGTGCTCT...GGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp ATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGGGGAGCAGGTTGCAGATaGCAATGGCCAACAAGTAGG +
Preference number: 4 (lower is better)
Translates to: IWPTSGGSRGAGLLLGRGGAGCR*QWPTSR
Trigger: CCTACTTGTTGGCCATTGGCATCTGCAACCTGCTCC...CCCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp GGGGTGCCCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTGTGCTCCCTCGACTCTaGAGGGGTTTTCTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: GVPTAVEAERAELCIIPPVLPRL*RGFLPG
Trigger: ACCTGGCAGAAAACCCCTGCAGAGTCGAGGGAGCAC...AGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGGGCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp GCACGACAGAGTGACCGGTCTATGACACAAAGGAGCTCAGGGCCCCTTGAGGTGATGCAGTCCCGGTTGTaGTCCCTCGACTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: ARQSDRSMTQRSSGPLEVMQSRL*SLDSAG
Trigger: CCCTGCAGAGTCGAGGGAGCACAACCGGGACTGCAT...CACCTCAAGGGGCCCTGAGCTCCTTTGTGTCATAGACCGGTCACTCTGTCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp GGGGTGCCCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTAGAAGTCGAGGAGGATaGAGTCCCGGTTGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: GVPTAVEAERAELCIIPPRSRGG*SPGCAP
Trigger: GGGAGCACAACCGGGACTGCATCCTCCTCGACTTCT...AGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGGGCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp GAGGAGGACGGGCAAAATGCAAGGCATGAAATGGGGAGGGTGTCCCTTCCATCCTCGGCAGAGGGCAGCTaGAAGGTTCCATGCCACCCC +
Preference number: 4 (lower is better)
Translates to: EEDGQNARHEMGRVSLPSSAEGS*KVPCHP
Trigger: GGGGTGGCATGGAACCTTGCAGCTGCCCTCTGCCGA...GGATGGAAGGGACACCCTCCCCATTTCATGCCTTGCATTTTGCCCGTCCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp GAGGCTAGGACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTGAAGCCCCTGAAGAGAATACGCACTaGCCCAGGCCCCTTGCAGGC +
Preference number: 4 (lower is better)
Translates to: EARTGHVEGNSTSLPEAPEENTH*PRPLAG
Trigger: GCCTGCAAGGGGCCTGGGGCAGTGCGTATTCTCTTC...AGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTCCTAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp AGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCCCCAGAACCCCCAGATaGCTCTCGACCGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: RVARVPRAGAILCKLQGFPRTPR*LSTEAT
Trigger: GGTGGCCTCGGTCGAGAGCCATCTGGGGGTTCTGGG...GAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp AGGTGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGTTCTTGGTCATCGTCTaGTACATGCCGATGAAGGCT +
Preference number: 4 (lower is better)
Translates to: RWDEGDPRTRVARVPRAGFLVIV*YMPMKA
Trigger: AGCCTTCATCGGCATGTACCAGACGATGACCAAGAA...CCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp GCACGACAGAGTGACCGGTCTATGACACAAAGGAGCTCAGGGCCCCTTGAGGTGGGCAGGCTCGGTCAATaGCCACCAGCAGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: ARQSDRSMTQRSSGPLEVGRLGQ*PPAGSS
Trigger: AGAAGACCCTGCTGGTGGCCATTGACCGAGCCTGCC...CACCTCAAGGGGCCCTGAGCTCCTTTGTGTCATAGACCGGTCACTCTGTCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp GAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCCACAGAGCTCATaGAGTCCACTCGGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: EESSNLANIWGFQGSRPAPPQSS*SPLGAE
Trigger: CTCGGCCCCGAGTGGACTCCATGAGCTCTGTGGAGG...AGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp AGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGACCCGAACATGGCGATaGAGGAGAGGAAGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: SNLANIWGFQGSRPAPRQTRTWR*RRGSAR
Trigger: TCTGGCACTTCCTCTCCTCCATCGCCATGTTCGGGT...CTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GAGGAGGACGGGCAAAATGCAAGGCATGAAATGGGGAGGGTGTCCCTTCCATCCATCCAAGGACCAGGGTaGCCAGGGTGCCCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: EEDGQNARHEMGRVSLPSIQGPG*PGCPEL
Trigger: CAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGAT...GGATGGAAGGGACACCCTCCCCATTTCATGCCTTGCATTTTGCCCGTCCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp AGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCCCTCAGCATCTGGGGTaGACCAGGTGGGACGAAGGG +
Preference number: 4 (lower is better)
Translates to: RRKQQFGQHLGVPGEQACPQHLG*TRWDEG
Trigger: CCCTTCGTCCCACCTGGTCCACCCCAGATGCTGAGG...GCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp CAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCGCTGCCATCCAGTGCTaGGCAGCGGTGCTGGGACTC +
Preference number: 4 (lower is better)
Translates to: QNGLNSVSSLLCPWTFLGAAIQC*AAVLGL
Trigger: GAGTCCCAGCACCGCTGCCCAGCACTGGATGGCAGC...GCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp AGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAATTTGGCCAACATCTaGGGGTTCCAGGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SNLANIWGFQGSRPAPRQNLANI*GFQGSR
Trigger: CCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATT...CTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GCCCTGAGCACAGGTCAGAGGGAAGAGAATACGCACTGCCCCAGGCCCCTTGCACAGCCCAAAGAGAACTaGGGCCCTGATACAGGACAG +
Preference number: 4 (lower is better)
Translates to: ALSTGQREENTHCPRPLAQPKEN*GPDTGQ
Trigger: CTGTCCTGTATCAGGGCCCCAGTTCTCTTTGGGCTG...TGCAAGGGGCCTGGGGCAGTGCGTATTCTCTTCCCTCTGACCTGTGCTCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGATACCCCCATCCATCCTaGCTGACTGGAATGGGCAGT +
Preference number: 4 (lower is better)
Translates to: AIWPTSGGSRGAGLLLGRYPHPS*LTGMGS
Trigger: ACTGCCCATTCCAGTCAGCCAGGATGGATGGGGGTA...TCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GGGGTGCCCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTCTCCCTCCAGTCCTaGTGCTGGCATCAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: GVPTAVEAERAELCIIPPFSLQS*CWHQSG
Trigger: CCCAGACTGATGCCAGCACCAGGACTGGAGGGAGAA...AGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGGGCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp AGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGGCCCCTGGACATTCTTaGGCAGTGTCAATGGCACTG +
Preference number: 4 (lower is better)
Translates to: SNLANIWGFQGSRPAPRQAPGHS*AVSMAL
Trigger: CAGTGCCATTGACACTGCCCAAGAATGTCCAGGGGC...CTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGCCCCTGGACATTCTTaGGCAGTGTCAATGGCACTG +
Preference number: 4 (lower is better)
Translates to: AIWPTSGGSRGAGLLLGRAPGHS*AVSMAL
Trigger: CAGTGCCATTGACACTGCCCAAGAATGTCCAGGGGC...TCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGATCCCTCCTTTGCCCCTaGACATTCTTGGGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: AIWPTSGGSRGAGLLLGRSLLCP*TFLGSV
Trigger: GACACTGCCCAAGAATGTCCAGGGGCAAAGGAGGGA...TCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp CAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGTCCCTCCTTTGCCCCTaGACATTCTTGGGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: QFGQHLGVPGEQACSSAESLLCP*TFLGSV
Trigger: GACACTGCCCAAGAATGTCCAGGGGCAAAGGAGGGA...CTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTGGGTGCCCACAGCTGTaGAGGCAGAACGGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: EESSNLANIWGFQGSRPAGCPQL*RQNGLN
Trigger: GTTCAGCCCGTTCTGCCTCCACAGCTGTGGGCACCC...AGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp GCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGATGTTGGAGGTCACCTTaGCAATTACCGAGTCCACGC +
Preference number: 4 (lower is better)
Translates to: AIWPTSGGSRGAGLLLGRCWRSP*QLPSPR
Trigger: GCGTGGACTCGGTAATTGTCAAGGTGACCTCCAACA...TCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp AGGTGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGATTGCTTGGTGCGAATaGCATTCTTGTCGGAATCGA +
Preference number: 4 (lower is better)
Translates to: RWDEGDPRTRVARVPRAGIAWCE*HSCRNR
Trigger: TCGATTCCGACAAGAATGTCATTCGCACCAAGCAAT...CCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp GCCCTGAGCACAGGTCAGAGGGAAGAGAATACGCACTGCCCCAGGCCCCTTGCATGTCCTGATTCCCTGTaGCATTCACCACCGTCTGGT +
Preference number: 4 (lower is better)
Translates to: ALSTGQREENTHCPRPLACPDSL*HSPPSG
Trigger: ACCAGACGGTGGTGAATGTCACAGGGAATCAGGACA...TGCAAGGGGCCTGGGGCAGTGCGTATTCTCTTCCCTCTGACCTGTGCTCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp GGGGTGCCCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTAGAGTGACCGGTCTATaGCACAAAGGAGCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: GVPTAVEAERAELCIIPPRVTGL*HKGAQG
Trigger: GCCCTGAGCTCCTTTGTGTCATAGACCGGTCACTCT...AGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGGGCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp ACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCGGAAGGCCCCAACACTaGGAAGAAAGCAGCAATTTG +
Preference number: 4 (lower is better)
Translates to: TKGIQGPGWPGCPELGQFGRPQH*EESSNL
Trigger: CAAATTGCTGCTTTCTTCTCAGTGTTGGGGCCTTCC...GAATTGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp ATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGGGGAAGGCCCCAACACTaGGAAGAAAGCAGCAATTTG +
Preference number: 4 (lower is better)
Translates to: IWPTSGGSRGAGLLLGRGGRPQH*EESSNL
Trigger: CAAATTGCTGCTTTCTTCTCAGTGTTGGGGCCTTCC...CCCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp GCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGCAAAATGCAAGGCATaGAATGGGGAGGGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: AIWPTSGGSRGAGLLLGRAKCKA*NGEGVP
Trigger: AGGGACACCCTCCCCATTTCATGCCTTGCATTTTGC...TCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp AGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGGCAAAATGCAAGGCATaGAATGGGGAGGGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: SNLANIWGFQGSRPAPRQAKCKA*NGEGVP
Trigger: AGGGACACCCTCCCCATTTCATGCCTTGCATTTTGC...CTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp AGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGAGAACTGGGGCCCTaGTACAGGACAGAGATTCAG +
Preference number: 4 (lower is better)
Translates to: SNLANIWGFQGSRPAPRQRELGP*YRTEIQ
Trigger: CTGAATCTCTGTCCTGTATCAGGGCCCCAGTTCTCT...CTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp CAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGAGAGAACTGGGGCCCTaGTACAGGACAGAGATTCAG +
Preference number: 4 (lower is better)
Translates to: QFGQHLGVPGEQACSSAERELGP*YRTEIQ
Trigger: CTGAATCTCTGTCCTGTATCAGGGCCCCAGTTCTCT...CTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp GGGGTGCCCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTCATCAGTCTGGGAGCTaGTGGGATGAAGAGGTGACC +
Preference number: 4 (lower is better)
Translates to: GVPTAVEAERAELCIIPPHQSGS*WDEEVT
Trigger: GGTCACCTCTTCATCCCATCAGCTCCCAGACTGATG...AGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGGGCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp GAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTAAGGAAGGGAAGGGGTaGGGCGCTTCTCCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: EESSNLANIWGFQGSRPAKEGKG*GASPSS
Trigger: ACTGGAGGGAGAAGCGCCTCACCCCTTCCCTTCCTT...AGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp ATCCTTCCTCTTGCAAAGGGACAAATGGAGAGCCAAAGGACAGGGGCCCATGGAAAGGCAGCCAGTGGCTaGCCGAGTCCCCAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: ILPLAKGQMESQRTGAHGKAASG*PSPQLS
Trigger: GGACAGCTGGGGACTCGGTCAGCCACTGGCTGCCTT...TCCATGGGCCCCTGTCCTTTGGCTCTCCATTTGTCCCTTTGCAAGAGGAAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532062.1
CDS-3UTR GCA 90 bp GAGGCTAGGACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTGAAGCCCCTCCTCGTCCACGTAGGTaGGCTCAAACTCGGCGTCTT +
Preference number: 4 (lower is better)
Translates to: EARTGHVEGNSTSLPEAPPRPRR*AQTRRL
Trigger: AAGACGCCGAGTTTGAGCGCACCTACGTGGACGAGG...AGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTCCTAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp ACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCGTACTGGGGCTGTGCTaGTGTGGTATTGAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: TKGIQGPGWPGCPELGQFVLGLC*CGIEAE
Trigger: TTCAGCTTCAATACCACAGCAGCACAGCCCCAGTAC...GAATTGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp CAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGCATCCCACTGACGTATaGCTCAGACGTGACTGCTTG +
Preference number: 4 (lower is better)
Translates to: QFGQHLGVPGEQACSSAEHPTDV*LRRDCL
Trigger: CAAGCAGTCACGTCTGAGGCATACGTCAGTGGGATG...CTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GCACGACAGAGTGACCGGTCTATGACACAAAGGAGCTCAGGGCCCCTTGAGGTGACGCCGTGTTCCCTTTaGCAAAGACCACGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: ARQSDRSMTQRSSGPLEVTPCSL*QRPRPA
Trigger: TGCTGGGCGTGGTCTTTGGCAAAGGGAACACGGCGT...CACCTCAAGGGGCCCTGAGCTCCTTTGTGTCATAGACCGGTCACTCTGTCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTAGAGCACGTGGAGGATaGGGCGGAAGATCCCCGAGT +
Preference number: 4 (lower is better)
Translates to: EESSNLANIWGFQGSRPARARGG*GGRSPS
Trigger: ACTCGGGGATCTTCCGCCGCATCCTCCACGTGCTCT...AGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GAGGAGGACGGGCAAAATGCAAGGCATGAAATGGGGAGGGTGTCCCTTCCATCCCCCAGACCACGGAGGTaGAAACGATGCAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: EEDGQNARHEMGRVSLPSPRPRR*KRCRAG
Trigger: CCCTGCTCTGCATCGTTTGCACCTCCGTGGTCTGGG...GGATGGAAGGGACACCCTCCCCATTTCATGCCTTGCATTTTGCCCGTCCTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp GAGGAGGACGGGCAAAATGCAAGGCATGAAATGGGGAGGGTGTCCCTTCCATCCATGCAGTCCCGGTTGTaGTCCCTCGACTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: EEDGQNARHEMGRVSLPSMQSRL*SLDSAG
Trigger: CCCTGCAGAGTCGAGGGAGCACAACCGGGACTGCAT...GGATGGAAGGGACACCCTCCCCATTTCATGCCTTGCATTTTGCCCGTCCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp GAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTATGCAGTCCCGGTTGTaGTCCCTCGACTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: EESSNLANIWGFQGSRPAMQSRL*SLDSAG
Trigger: CCCTGCAGAGTCGAGGGAGCACAACCGGGACTGCAT...AGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp GAGGCTAGGACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTGAAGCCCCTAGAAGTCGAGGAGGATaGAGTCCCGGTTGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: EARTGHVEGNSTSLPEAPRSRGG*SPGCAP
Trigger: GGGAGCACAACCGGGACTGCATCCTCCTCGACTTCT...AGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTCCTAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp AGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGATGGAGGAGAGGAAGTaGCAGATGTCGTGGTCGTCA +
Preference number: 4 (lower is better)
Translates to: SNLANIWGFQGSRPAPRQMEERK*QMSWSS
Trigger: TGACGACCACGACATCTGGCACTTCCTCTCCTCCAT...CTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp GCACGACAGAGTGACCGGTCTATGACACAAAGGAGCTCAGGGCCCCTTGAGGTGAGCTGCAAGGTTCCATaGCACCCCATGGCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: ARQSDRSMTQRSSGPLEVSCKVP*HPMAVP
Trigger: TGGGACAGCCATGGGGTGGCATGGAACCTTGCAGCT...CACCTCAAGGGGCCCTGAGCTCCTTTGTGTCATAGACCGGTCACTCTGTCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp GAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTGAAGAGAATACGCACTaGCCCAGGCCCCTTGCAGGC +
Preference number: 4 (lower is better)
Translates to: EESSNLANIWGFQGSRPAEENTH*PRPLAG
Trigger: GCCTGCAAGGGGCCTGGGGCAGTGCGTATTCTCTTC...AGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp AGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCCTCCAGTCCTGGTaGTGGCATCAGTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: RRKQQFGQHLGVPGEQACSLQSW*WHQSGS
Trigger: GCTCCCAGACTGATGCCAGCACCAGGACTGGAGGGA...GCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTCCCAGAACCCCCAGATaGCTCTCGACCGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: EAERAELCIIPPLPLDILPRTPR*LSTEAT
Trigger: GGTGGCCTCGGTCGAGAGCCATCTGGGGGTTCTGGG...AAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp CCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCCGGCTGACCCGGAGCTaGTATGTGGTGTTGACTGGT +
Preference number: 4 (lower is better)
Translates to: PQLWRQNGLNSVSSLLCPRLTRS*YVVLTG
Trigger: ACCAGTCAACACCACATACCAGCTCCGGGTCAGCCG...GGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp GGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGATCCAGACCCACCTCACACAGCTGCCGCATCTaGCCAGAGGGGAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: GNATIAWRRSEKRSRPTSHSCRI*PEGRRR
Trigger: GCGGCGCCTCCCCTCTGGCCAGATGCGGCAGCTGTG...TGAGGTGGGTCTGGATCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278951.11
CDS-3UTR CCA 90 bp GGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCAATCCAAGGACCAGGGTaGCCAGGGTGCCCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: GWPGCPELGQFFVNSKVSIQGPG*PGCPEL
Trigger: CAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGAT...TGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp CTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCAGTGTCAATGGCACTGGCTGGGCAGCGGTGCTaGGACTCATCCCCACAGCAC +
Preference number: 4 (lower is better)
Translates to: LYHPSFAPGHSWAVSMALAGQRC*DSSPQH
Trigger: GTGCTGTGGGGATGAGTCCCAGCACCGCTGCCCAGC...CAGTGCCATTGACACTGCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp ACACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCTGCCATCCAGTGCTaGGCAGCGGTGCTGGGACTC +
Preference number: 4 (lower is better)
Translates to: TLRRKQQFGQHLGVPGEQAAIQC*AAVLGL
Trigger: GAGTCCCAGCACCGCTGCCCAGCACTGGATGGCAGC...CTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAAAGTCTGGCACCAGCTaGCCAACCCCCAAAATCTCA +
Preference number: 4 (lower is better)
Translates to: AIWPTSGGSRGAGLLLGRKSGTS*PTPKIS
Trigger: TGAGATTTTGGGGGTTGGCCAGCTGGTGCCAGACTT...TCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GCCCTGAGCACAGGTCAGAGGGAAGAGAATACGCACTGCCCCAGGCCCCTTGCAAAGTCTGGCACCAGCTaGCCAACCCCCAAAATCTCA +
Preference number: 4 (lower is better)
Translates to: ALSTGQREENTHCPRPLAKSGTS*PTPKIS
Trigger: TGAGATTTTGGGGGTTGGCCAGCTGGTGCCAGACTT...TGCAAGGGGCCTGGGGCAGTGCGTATTCTCTTCCCTCTGACCTGTGCTCAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp GAGGCTAGGACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTGAAGCCCCTTGTGGTGTTGACTGGTaGCAGGGTGGACACATCCAC +
Preference number: 4 (lower is better)
Translates to: EARTGHVEGNSTSLPEAPCGVDW*QGGHIH
Trigger: GTGGATGTGTCCACCCTGTCACCAGTCAACACCACA...AGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTCCTAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp GAGGCTAGGACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTGAAGCCCCTGCTGGTATGTGGTGTTaGCTGGTGACAGGGTGGACA +
Preference number: 4 (lower is better)
Translates to: EARTGHVEGNSTSLPEAPAGMWC*LVTGWT
Trigger: TGTCCACCCTGTCACCAGTCAACACCACATACCAGC...AGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTCCTAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp GGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCACCACCGTCTGGTAGGTaGTCACCAGCTGCACCACAG +
Preference number: 4 (lower is better)
Translates to: GWPGCPELGQFFVNSKVSPPSGR*SPAAPQ
Trigger: CTGTGGTGCAGCTGGTGATCACCTACCAGACGGTGG...TGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp GAGGCTAGGACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTGAAGCCCCTGCACAGAGAAGAAGATaGCAATGGCCAGGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: EARTGHVEGNSTSLPEAPAQRRR*QWPGRR
Trigger: ACGCCTGCCTGGCCATTGTCATCTTCTTCTCTGTGC...AGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTCCTAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp GCACGACAGAGTGACCGGTCTATGACACAAAGGAGCTCAGGGCCCCTTGAGGTGAGAGTGACCGGTCTATaGCACAAAGGAGCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: ARQSDRSMTQRSSGPLEVRVTGL*HKGAQG
Trigger: GCCCTGAGCTCCTTTGTGTCATAGACCGGTCACTCT...CACCTCAAGGGGCCCTGAGCTCCTTTGTGTCATAGACCGGTCACTCTGTCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp AATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGGGAAGGCCCCAACACTaGGAAGAAAGCAGCAATTTG +
Preference number: 4 (lower is better)
Translates to: NLANIWGFQGSRPAPRQRGRPQH*EESSNL
Trigger: CAAATTGCTGCTTTCTTCTCAGTGTTGGGGCCTTCC...CCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp AGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCCCCATCCATCCTGGCTaGCTGGAATGGGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: RRKQQFGQHLGVPGEQACPIHPG*LEWAVM
Trigger: CATCACTGCCCATTCCAGTCAGCCAGGATGGATGGG...GCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp GAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCCATCCATCCTGGCTaGCTGGAATGGGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: EESSNLANIWGFQGSRPAPIHPG*LEWAVM
Trigger: CATCACTGCCCATTCCAGTCAGCCAGGATGGATGGG...AGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp ATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGGCTGAATTCAGCCTCTTaGATCAGAAGGCGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: IWPTSGGSRGAGLLLGRGLNSAS*IRRRFS
Trigger: TGAGAACCGCCTTCTGATTCAAGAGGCTGAATTCAG...CCCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp GCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGATGGGATGAAGAGGTaGCCTCTGAATTCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: AIWPTSGGSRGAGLLLGRDGMKR*PLNSAS
Trigger: AGAGGCTGAATTCAGAGGTCACCTCTTCATCCCATC...TCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp CCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCCATCAGTCTGGGAGCTaGTGGGATGAAGAGGTGACC +
Preference number: 4 (lower is better)
Translates to: PQLWRQNGLNSVSSLLCPHQSGS*WDEEVT
Trigger: GGTCACCTCTTCATCCCATCAGCTCCCAGACTGATG...GGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp CAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCAAGGAAGGGAAGGGGTaGGGCGCTTCTCCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: QNGLNSVSSLLCPWTFLGKEGKG*GASPSS
Trigger: ACTGGAGGGAGAAGCGCCTCACCCCTTCCCTTCCTT...GCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp GAGGAGGACGGGCAAAATGCAAGGCATGAAATGGGGAGGGTGTCCCTTCCATCCCAGTGTCAATGGCACTaGAAGGCCACCAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: EEDGQNARHEMGRVSLPSQCQWH*KATSWG
Trigger: ACCCCAGCTGGTGGCCTTTCAGTGCCATTGACACTG...GGATGGAAGGGACACCCTCCCCATTTCATGCCTTGCATTTTGCCCGTCCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp GAGGCTAGGACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTGAAGCCCCTAACGGCGCCCCCTTCTaGTTGTTCAGGACGTTCACA +
Preference number: 4 (lower is better)
Translates to: EARTGHVEGNSTSLPEAPNGAPF*LFRTFT
Trigger: TGTGAACGTCCTGAACAAGCAGAAGGGGGCGCCGTT...AGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTCCTAGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp AATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGGTACTGGGGCTGTGCTaGTGTGGTATTGAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: NLANIWGFQGSRPAPRQRVLGLC*CGIEAE
Trigger: TTCAGCTTCAATACCACAGCAGCACAGCCCCAGTAC...CCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp ACACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGGGCACAGAGGTCATTaGGCAGCAGGGCCCGGTTGT +
Preference number: 4 (lower is better)
Translates to: TLRRKQQFGQHLGVPGEQGHRGH*AAGPGC
Trigger: ACAACCGGGCCCTGCTGCGCAATGACCTCTGTGCCC...CTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp CTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCAGTGTCAATGGCACTGGGGCACAGAGGTCATTaGGCAGCAGGGCCCGGTTGT +
Preference number: 4 (lower is better)
Translates to: LYHPSFAPGHSWAVSMALGHRGH*AAGPGC
Trigger: ACAACCGGGCCCTGCTGCGCAATGACCTCTGTGCCC...CAGTGCCATTGACACTGCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp ATCCTTCCTCTTGCAAAGGGACAAATGGAGAGCCAAAGGACAGGGGCCCATGGAGGGCACAGAGGTCATTaGGCAGCAGGGCCCGGTTGT +
Preference number: 4 (lower is better)
Translates to: ILPLAKGQMESQRTGAHGGHRGH*AAGPGC
Trigger: ACAACCGGGCCCTGCTGCGCAATGACCTCTGTGCCC...TCCATGGGCCCCTGTCCTTTGGCTCTCCATTTGTCCCTTTGCAAGAGGAAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp AGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCAGAGCACGTGGAGGATaGGGCGGAAGATCCCCGAGT +
Preference number: 4 (lower is better)
Translates to: RVARVPRAGAILCKLQGFRARGG*GGRSPS
Trigger: ACTCGGGGATCTTCCGCCGCATCCTCCACGTGCTCT...GAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATACGTAGAGCGGCCCGCTaGACTGCCGGATGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: VARVPRAGAILCKLQGFIRRAAR*TAGCSL
Trigger: CAGACTGCATCCGGCAGTGCAGCGGGCCGCTCTACG...TATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp ATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGGAGTAAAGGAGCAGGTTaGAGATGCCAATGGCCAACA +
Preference number: 4 (lower is better)
Translates to: IWPTSGGSRGAGLLLGRGSKGAG*RCQWPT
Trigger: TGTTGGCCATTGGCATCTGCAACCTGCTCCTTTACT...CCCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp CAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCCCCAGACCACGGAGGTaGAAACGATGCAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: QNGLNSVSSLLCPWTFLGPRPRR*KRCRAG
Trigger: CCCTGCTCTGCATCGTTTGCACCTCCGTGGTCTGGG...GCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp AGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCTGCAGGGGTTTTCTaGCAGGTGCTGAGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: RRKQQFGQHLGVPGEQACSAGVF*QVLSPW
Trigger: CCAGGGACTCAGCACCTGGCAGAAAACCCCTGCAGA...GCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp GAGGAGGACGGGCAAAATGCAAGGCATGAAATGGGGAGGGTGTCCCTTCCATCCAGAAGTCGAGGAGGATaGAGTCCCGGTTGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: EEDGQNARHEMGRVSLPSRSRGG*SPGCAP
Trigger: GGGAGCACAACCGGGACTGCATCCTCCTCGACTTCT...GGATGGAAGGGACACCCTCCCCATTTCATGCCTTGCATTTTGCCCGTCCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp GAGGAGGACGGGCAAAATGCAAGGCATGAAATGGGGAGGGTGTCCCTTCCATCCAGCTGCAAGGTTCCATaGCACCCCATGGCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: EEDGQNARHEMGRVSLPSSCKVP*HPMAVP
Trigger: TGGGACAGCCATGGGGTGGCATGGAACCTTGCAGCT...GGATGGAAGGGACACCCTCCCCATTTCATGCCTTGCATTTTGCCCGTCCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp ACACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGTCGGCAGAGGGCAGCTaGAAGGTTCCATGCCACCCC +
Preference number: 4 (lower is better)
Translates to: TLRRKQQFGQHLGVPGEQSAEGS*KVPCHP
Trigger: GGGGTGGCATGGAACCTTGCAGCTGCCCTCTGCCGA...CTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp GGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCAGAAGAGAATACGCACTaGCCCAGGCCCCTTGCAGGC +
Preference number: 4 (lower is better)
Translates to: GWPGCPELGQFFVNSKVSEENTH*PRPLAG
Trigger: GCCTGCAAGGGGCCTGGGGCAGTGCGTATTCTCTTC...TGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp ACACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGAGCCCCCGCAGGCTTaGTCTTCGGTCTTCACCACC +
Preference number: 4 (lower is better)
Translates to: TLRRKQQFGQHLGVPGEQEPPQA*SSVFTT
Trigger: GGTGGTGAAGACCGAAGACCAAGCCTGCGGGGGCTC...CTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp GGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCAGGCAGGCTCGGTCAATaGCCACCAGCAGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GWPGCPELGQFFVNSKVSGRLGQ*PPAGSS
Trigger: AGAAGACCCTGCTGGTGGCCATTGACCGAGCCTGCC...TGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp GGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCACAAAGGAGCGGCCCATaGCAATGCACAGCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: GWPGCPELGQFFVNSKVSQRSGP*QCTAAA
Trigger: TGCGGCAGCTGTGCATTGCCATGGGCCGCTCCTTTG...TGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278951.11
CDS-3UTR CCA 90 bp TGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCACATAGAAGACAGCAATaGTGGCAATGTTCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: WDEGDPRTRVARVPRAGAHRRQQ*WQCSRS
Trigger: ACTTCTGGAACATTGCCACCATTGCTGTCTTCTATG...TGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp AATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGAAAGCCCAAAGTGTTTaGGGATCCCACATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: NLANIWGFQGSRPAPRQRKAQSV*GSHIPG
Trigger: CCCTGGAATGTGGGATCCCCAAACACTTTGGGCTTT...CCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp AGGTGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGGAAATTGGTATAGTTaGGGCACACATGATAGCAAG +
Preference number: 4 (lower is better)
Translates to: RWDEGDPRTRVARVPRAGGNWYS*GTHDSK
Trigger: CTTGCTATCATGTGTGCCCCAACTATACCAATTTCC...CCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp AATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGGGTTGCAGATGCCAATaGCCAACAAGTAGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: NLANIWGFQGSRPAPRQRGCRCQ*PTSRKR
Trigger: TCGCTTCCTACTTGTTGGCCATTGGCATCTGCAACC...CCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGTTGCAGATGCCAATaGCCAACAAGTAGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: AIWPTSGGSRGAGLLLGRGCRCQ*PTSRKR
Trigger: TCGCTTCCTACTTGTTGGCCATTGGCATCTGCAACC...TCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp ACACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGCCTCAGCATCTGGGGTaGACCAGGTGGGACGAAGGG +
Preference number: 4 (lower is better)
Translates to: TLRRKQQFGQHLGVPGEQPQHLG*TRWDEG
Trigger: CCCTTCGTCCCACCTGGTCCACCCCAGATGCTGAGG...CTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp ATCCTTCCTCTTGCAAAGGGACAAATGGAGAGCCAAAGGACAGGGGCCCATGGACCCATCCTCAGCATCTaGGGTGGACCAGGTGGGACG +
Preference number: 4 (lower is better)
Translates to: ILPLAKGQMESQRTGAHGPILSI*GGPGGT
Trigger: CGTCCCACCTGGTCCACCCCAGATGCTGAGGATGGG...TCCATGGGCCCCTGTCCTTTGGCTCTCCATTTGTCCCTTTGCAAGAGGAAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GCACGACAGAGTGACCGGTCTATGACACAAAGGAGCTCAGGGCCCCTTGAGGTGAATTTGGCCAACATCTaGGGGTTCCAGGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: ARQSDRSMTQRSSGPLEVNLANI*GFQGSR
Trigger: CCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATT...CACCTCAAGGGGCCCTGAGCTCCTTTGTGTCATAGACCGGTCACTCTGTCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GCACGACAGAGTGACCGGTCTATGACACAAAGGAGCTCAGGGCCCCTTGAGGTGTTAGCACCAAAAGTCTaGCACCAGCTGGCCAACCCC +
Preference number: 4 (lower is better)
Translates to: ARQSDRSMTQRSSGPLEVLAPKV*HQLANP
Trigger: GGGGTTGGCCAGCTGGTGCCAGACTTTTGGTGCTAA...CACCTCAAGGGGCCCTGAGCTCCTTTGTGTCATAGACCGGTCACTCTGTCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp CCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCGCCCCTGGACATTCTTaGGCAGTGTCAATGGCACTG +
Preference number: 4 (lower is better)
Translates to: PQLWRQNGLNSVSSLLCPAPGHS*AVSMAL
Trigger: CAGTGCCATTGACACTGCCCAAGAATGTCCAGGGGC...GGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GAGGCTAGGACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTGAAGCCCCTTCCCTCCTTTGCCCCTaGACATTCTTGGGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: EARTGHVEGNSTSLPEAPSLLCP*TFLGSV
Trigger: GACACTGCCCAAGAATGTCCAGGGGCAAAGGAGGGA...AGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTCCTAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp ATCCTTCCTCTTGCAAAGGGACAAATGGAGAGCCAAAGGACAGGGGCCCATGGAGGGTGCCCACAGCTGTaGAGGCAGAACGGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: ILPLAKGQMESQRTGAHGGCPQL*RQNGLN
Trigger: GTTCAGCCCGTTCTGCCTCCACAGCTGTGGGCACCC...TCCATGGGCCCCTGTCCTTTGGCTCTCCATTTGTCCCTTTGCAAGAGGAAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp ATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGGCTTATGCCCAACATTTaGAAGTTGTCCTTAGCCCCC +
Preference number: 4 (lower is better)
Translates to: IWPTSGGSRGAGLLLGRGLMPNI*KLSLAP
Trigger: GGGGGCTAAGGACAACTTCCAAATGTTGGGCATAAG...CCCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532062.1
CDS-3UTR TCA 90 bp AGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCGCTGGTATGTGGTGTTaGCTGGTGACAGGGTGGACA +
Preference number: 4 (lower is better)
Translates to: RRKQQFGQHLGVPGEQACAGMWC*LVTGWT
Trigger: TGTCCACCCTGTCACCAGTCAACACCACATACCAGC...GCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp GAGGCTAGGACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTGAAGCCCCTCAGGGAACTCATACTTaGAGTACTGGGGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: EARTGHVEGNSTSLPEAPQGTHT*STGAVL
Trigger: CAGCACAGCCCCAGTACTTCAAGTATGAGTTCCCTG...AGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTCCTAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp GAGGCTAGGACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTGAAGCCCCTGGACACAGCACATCCTaGATGGAGATGACTGAGCAG +
Preference number: 4 (lower is better)
Translates to: EARTGHVEGNSTSLPEAPGHSTS*MEMTEQ
Trigger: CTGCTCAGTCATCTCCATTCAGGATGTGCTGTGTCC...AGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTCCTAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp GGGGTGCCCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTCTGGTACATGCCGATaGAGGCTACGTTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: GVPTAVEAERAELCIIPPSGTCR*RLRCCP
Trigger: TGGACAACAACGTAGCCTTCATCGGCATGTACCAGA...AGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGGGCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp AGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCCGTATGCCTCAGACGTaGCTGCTTGAGACACCAGCA +
Preference number: 4 (lower is better)
Translates to: RRKQQFGQHLGVPGEQACRMPQT*LLETPA
Trigger: TGCTGGTGTCTCAAGCAGTCACGTCTGAGGCATACG...GCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp AATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGCGGCGATCATGTACATaGACGATGTGTCAAACTGGA +
Preference number: 4 (lower is better)
Translates to: NLANIWGFQGSRPAPRQRRRSCT*TMCQTG
Trigger: TCCAGTTTGACACATCGTTCATGTACATGATCGCCG...CCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp GTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATATGTAGGCGCTGGCGTTaGTGTCCGGGTGCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: VARVPRAGAILCKLQGFICRRWR*CPGAAS
Trigger: AGAAGCGGCACCCGGACATCAACGCCAGCGCCTACA...TATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp GAGGCTAGGACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTGAAGCCCCTCACAGCACGACAGAGTaGCCGGTCTATGACACAAAG +
Preference number: 4 (lower is better)
Translates to: EARTGHVEGNSTSLPEAPHSTTE*PVYDTK
Trigger: CTTTGTGTCATAGACCGGTCACTCTGTCGTGCTGTG...AGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTCCTAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp ACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCCCATCCATCCTGGCTaGCTGGAATGGGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: TEKKAAIWPTSGGSRGAGPIHPG*LEWAVM
Trigger: CATCACTGCCCATTCCAGTCAGCCAGGATGGATGGG...GCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp CAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCCAGTGTCAATGGCACTaGAAGGCCACCAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: QNGLNSVSSLLCPWTFLGQCQWH*KATSWG
Trigger: ACCCCAGCTGGTGGCCTTTCAGTGCCATTGACACTG...GCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp ACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCAGTGTCAATGGCACTaGAAGGCCACCAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: TEKKAAIWPTSGGSRGAGQCQWH*KATSWG
Trigger: ACCCCAGCTGGTGGCCTTTCAGTGCCATTGACACTG...GCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp AGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCGGAGGCAGAACGGGCTaGACTCTGTATCATCCCTCC +
Preference number: 4 (lower is better)
Translates to: RVARVPRAGAILCKLQGFGGRTG*TLYHPS
Trigger: GGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCC...GAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp CAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCGGAGGCAGAACGGGCTaGACTCTGTATCATCCCTCC +
Preference number: 4 (lower is better)
Translates to: QNGLNSVSSLLCPWTFLGGGRTG*TLYHPS
Trigger: GGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCC...GCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp GGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCAGGAGGCAGAACGGGCTaGACTCTGTATCATCCCTCC +
Preference number: 4 (lower is better)
Translates to: GWPGCPELGQFFVNSKVSGGRTG*TLYHPS
Trigger: GGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCC...TGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp AGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCAACTCGGCGTCTTTCTaGGAGACGTTCTTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: RVARVPRAGAILCKLQGFNSASF*ETFLGP
Trigger: GGGGCCCAAGAACGTCTCGCAGAAAGACGCCGAGTT...GAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp AATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGCCACATAAAAGCTGTTaGTGGGGAAGTCTTTGCGCT +
Preference number: 4 (lower is better)
Translates to: NLANIWGFQGSRPAPRQRPHKSC*WGSLCA
Trigger: AGCGCAAAGACTTCCCCAGCAACAGCTTTTATGTGG...CCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GAGGCTAGGACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTGAAGCCCCTGACCGGTTCATCTTCTaGGAAGGGGTAGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: EARTGHVEGNSTSLPEAPDRFIF*EGVERQ
Trigger: CTGCCTTTCTACCCCTTCGCAGAAGATGAACCGGTC...AGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTCCTAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp AGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCACGCTTGTCCTTCCGTaGCAGGTCAGCCACATAGAG +
Preference number: 4 (lower is better)
Translates to: RRKQQFGQHLGVPGEQACTLVLP*QVSHIE
Trigger: CTCTATGTGGCTGACCTGGCACGGAAGGACAAGCGT...GCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GAGGAGGACGGGCAAAATGCAAGGCATGAAATGGGGAGGGTGTCCCTTCCATCCCCATCATCAGGGCTGTaGCCATGGCGTAGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: EEDGQNARHEMGRVSLPSPSSGL*PWRRKA
Trigger: GGCTTTTCTACGCCATGGGCACAGCCCTGATGATGG...GGATGGAAGGGACACCCTCCCCATTTCATGCCTTGCATTTTGCCCGTCCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp CAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGAGTAAAGGAGCAGGTTaGAGATGCCAATGGCCAACA +
Preference number: 4 (lower is better)
Translates to: QFGQHLGVPGEQACSSAESKGAG*RCQWPT
Trigger: TGTTGGCCATTGGCATCTGCAACCTGCTCCTTTACT...CTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp AGGACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTGAAGCCCCTTTAGTACCCAGACCACGGAGGTaGAAACGATGCAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: RTGHVEGNSTSLPEAPLVPRPRR*KRCRAG
Trigger: CCCTGCTCTGCATCGTTTGCACCTCCGTGGTCTGGG...TACTAAAGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278951.11
CDS-3UTR GCA 90 bp CAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCTCTGCAGGGGTTTTCTaGCAGGTGCTGAGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: QNGLNSVSSLLCPWTFLGSAGVF*QVLSPW
Trigger: CCAGGGACTCAGCACCTGGCAGAAAACCCCTGCAGA...GCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp ACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCTCTGCAGGGGTTTTCTaGCAGGTGCTGAGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: TEKKAAIWPTSGGSRGAGSAGVF*QVLSPW
Trigger: CCAGGGACTCAGCACCTGGCAGAAAACCCCTGCAGA...GCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp GGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCAGTGCTCCCTCGACTCTaGAGGGGTTTTCTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: GWPGCPELGQFFVNSKVSVLPRL*RGFLPG
Trigger: ACCTGGCAGAAAACCCCTGCAGAGTCGAGGGAGCAC...TGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp GGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCAAGAAGTCGAGGAGGATaGAGTCCCGGTTGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: GWPGCPELGQFFVNSKVSRSRGG*SPGCAP
Trigger: GGGAGCACAACCGGGACTGCATCCTCCTCGACTTCT...TGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp GCACGACAGAGTGACCGGTCTATGACACAAAGGAGCTCAGGGCCCCTTGAGGTGATGGAGGAGAGGAAGTaGCAGATGTCGTGGTCGTCA +
Preference number: 4 (lower is better)
Translates to: ARQSDRSMTQRSSGPLEVMEERK*QMSWSS
Trigger: TGACGACCACGACATCTGGCACTTCCTCTCCTCCAT...CACCTCAAGGGGCCCTGAGCTCCTTTGTGTCATAGACCGGTCACTCTGTCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp ACACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGTCCCTCCAGTCCTGGTaGTGGCATCAGTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: TLRRKQQFGQHLGVPGEQSLQSW*WHQSGS
Trigger: GCTCCCAGACTGATGCCAGCACCAGGACTGGAGGGA...CTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp ACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCAGGATTAGGGGCACCTaGAAGGACACCACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: TEKKAAIWPTSGGSRGAGRIRGT*KDTTAS
Trigger: GGAGGCTGTGGTGTCCTTCCAGGTGCCCCTAATCCT...GCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp CAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGTCATACTTGAAGTACTaGGGCTGTGCTGCTGTGGTA +
Preference number: 4 (lower is better)
Translates to: QFGQHLGVPGEQACSSAESYLKY*GCAAVV
Trigger: TACCACAGCAGCACAGCCCCAGTACTTCAAGTATGA...CTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp ACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCCATAAAAGCTGTTGCTaGGGAAGTCTTTGCGCTGTA +
Preference number: 4 (lower is better)
Translates to: TKGIQGPGWPGCPELGQFHKSCC*GSLCAV
Trigger: TACAGCGCAAAGACTTCCCCAGCAACAGCTTTTATG...GAATTGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp AGGACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTGAAGCCCCTTTAGTAAGGGTGACCGCTTTCTaGGCAGGCTCGGTCAATGGC +
Preference number: 4 (lower is better)
Translates to: RTGHVEGNSTSLPEAPLVRVTAF*AGSVNG
Trigger: GCCATTGACCGAGCCTGCCCAGAAAGCGGTCACCCT...TACTAAAGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278951.11
CDS-3UTR CCA 90 bp ACACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGAGGGTGACCGCTTTCTaGGCAGGCTCGGTCAATGGC +
Preference number: 4 (lower is better)
Translates to: TLRRKQQFGQHLGVPGEQRVTAF*AGSVNG
Trigger: GCCATTGACCGAGCCTGCCCAGAAAGCGGTCACCCT...CTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324225.9
ENST00000620360.4
CDS-3UTR CCA 90 bp AGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCGCTGAGATTGCCCAGTaGGTGGGCGCAGAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: RVARVPRAGAILCKLQGFAEIAQ*VGAEEV
Trigger: AACTTCCTCTGCGCCCACCCACTGGGCAATCTCAGC...GAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp GGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCAGCTGAGATTGCCCAGTaGGTGGGCGCAGAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: GWPGCPELGQFFVNSKVSAEIAQ*VGAEEV
Trigger: AACTTCCTCTGCGCCCACCCACTGGGCAATCTCAGC...TGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp AGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCACCCGAACATGGCGATaGAGGAGAGGAAGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: RRKQQFGQHLGVPGEQACTRTWR*RRGSAR
Trigger: TCTGGCACTTCCTCTCCTCCATCGCCATGTTCGGGT...GCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTACCCGAACATGGCGATaGAGGAGAGGAAGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: EESSNLANIWGFQGSRPATRTWR*RRGSAR
Trigger: TCTGGCACTTCCTCTCCTCCATCGCCATGTTCGGGT...AGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp AGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCGGAAGGACCCGAACATaGCGATGGAGGAGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: RRKQQFGQHLGVPGEQACGRTRT*RWRRGS
Trigger: ACTTCCTCTCCTCCATCGCCATGTTCGGGTCCTTCC...GCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTGGAAGGACCCGAACATaGCGATGGAGGAGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: EESSNLANIWGFQGSRPAGRTRT*RWRRGS
Trigger: ACTTCCTCTCCTCCATCGCCATGTTCGGGTCCTTCC...AGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATACCTCAGCATCTGGGGTaGACCAGGTGGGACGAAGGG +
Preference number: 4 (lower is better)
Translates to: VARVPRAGAILCKLQGFIPQHLG*TRWDEG
Trigger: CCCTTCGTCCCACCTGGTCCACCCCAGATGCTGAGG...TATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GAGGAGGACGGGCAAAATGCAAGGCATGAAATGGGGAGGGTGTCCCTTCCATCCAATTTGGCCAACATCTaGGGGTTCCAGGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: EEDGQNARHEMGRVSLPSNLANI*GFQGSR
Trigger: CCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATT...GGATGGAAGGGACACCCTCCCCATTTCATGCCTTGCATTTTGCCCGTCCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp ACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCAAGGACAGGGGCCCATaGAAGGCCCCAACACTGAGA +
Preference number: 4 (lower is better)
Translates to: TEKKAAIWPTSGGSRGAGKDRGP*KAPTLR
Trigger: TCTCAGTGTTGGGGCCTTCCATGGGCCCCTGTCCTT...GCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCAGCCCAAAGAGAACTaGGGCCCTGATACAGGACAG +
Preference number: 4 (lower is better)
Translates to: EESSNLANIWGFQGSRPAQPKEN*GPDTGQ
Trigger: CTGTCCTGTATCAGGGCCCCAGTTCTCTTTGGGCTG...AGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GCACGACAGAGTGACCGGTCTATGACACAAAGGAGCTCAGGGCCCCTTGAGGTGAAGTCTGGCACCAGCTaGCCAACCCCCAAAATCTCA +
Preference number: 4 (lower is better)
Translates to: ARQSDRSMTQRSSGPLEVKSGTS*PTPKIS
Trigger: TGAGATTTTGGGGGTTGGCCAGCTGGTGCCAGACTT...CACCTCAAGGGGCCCTGAGCTCCTTTGTGTCATAGACCGGTCACTCTGTCGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp AATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGAGGCGGTTCTCAAATTaGGCTGAGCGCATTGCTAAA +
Preference number: 4 (lower is better)
Translates to: NLANIWGFQGSRPAPRQRRRFSN*AERIAK
Trigger: TTTAGCAATGCGCTCAGCCCAATTTGAGAACCGCCT...CCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAGGGTGCCCACAGCTGTaGAGGCAGAACGGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: VARVPRAGAILCKLQGFIGCPQL*RQNGLN
Trigger: GTTCAGCCCGTTCTGCCTCCACAGCTGTGGGCACCC...TATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp AGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTGTTGGAGGTCACCTTaGCAATTACCGAGTCCACGC +
Preference number: 4 (lower is better)
Translates to: RRKQQFGQHLGVPGEQACCWRSP*QLPSPR
Trigger: GCGTGGACTCGGTAATTGTCAAGGTGACCTCCAACA...GCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp GAGGCTAGGACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTGAAGCCCCTTCTGGTACATGCCGATaGAGGCTACGTTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: EARTGHVEGNSTSLPEAPSGTCR*RLRCCP
Trigger: TGGACAACAACGTAGCCTTCATCGGCATGTACCAGA...AGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTCCTAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp AGGACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTGAAGCCCCTTTAGTACTTTGCGCTGTACGGTaGTGGCCGCCTTCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: RTGHVEGNSTSLPEAPLVLCAVR*WPPSWS
Trigger: TGACCAAGAAGGCGGCCATCACCGTACAGCGCAAAG...TACTAAAGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278951.11
CDS-3UTR TCA 90 bp ATCCTTCCTCTTGCAAAGGGACAAATGGAGAGCCAAAGGACAGGGGCCCATGGACTTTGCGCTGTACGGTaGTGGCCGCCTTCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: ILPLAKGQMESQRTGAHGLCAVR*WPPSWS
Trigger: TGACCAAGAAGGCGGCCATCACCGTACAGCGCAAAG...TCCATGGGCCCCTGTCCTTTGGCTCTCCATTTGTCCCTTTGCAAGAGGAAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp GGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATTGAGACACCAGCACTaGCAGGGTTTTCTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: GWPGCPELGQFFVNSKVSLRHQH*QGFLAV
Trigger: CACCGCCAGAAAACCCTGTCAGTGCTGGTGTCTCAA...TGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp ACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCTTGAGACACCAGCACTaGCAGGGTTTTCTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: TEKKAAIWPTSGGSRGAGLRHQH*QGFLAV
Trigger: CACCGCCAGAAAACCCTGTCAGTGCTGGTGTCTCAA...GCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp GGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATCAGACGTGACTGCTTaGGACACCAGCACTGACAGG +
Preference number: 4 (lower is better)
Translates to: GWPGCPELGQFFVNSKVSSDVTA*DTSTDR
Trigger: CCTGTCAGTGCTGGTGTCTCAAGCAGTCACGTCTGA...TGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp CAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCGCACAGAGAAGAAGATaGCAATGGCCAGGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: QNGLNSVSSLLCPWTFLGAQRRR*QWPGRR
Trigger: ACGCCTGCCTGGCCATTGTCATCTTCTTCTCTGTGC...GCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp CAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGAGGTATGTGTGTGCATaGCTAACACAGAACTTGCCT +
Preference number: 4 (lower is better)
Translates to: QFGQHLGVPGEQACSSAERYVCA*LTQNLP
Trigger: AGGCAAGTTCTGTGTTAGTCATGCACACACATACCT...CTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp AGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCAGCATGGAGACGCTCTaGGAAAAGATCCAGACCCAC +
Preference number: 4 (lower is better)
Translates to: RRKQQFGQHLGVPGEQACSMETL*EKIQTH
Trigger: GTGGGTCTGGATCTTTTCTCAGAGCGTCTCCATGCT...GCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp GGGGTGCCCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTCTGAATTCAGCCTCTTaGATCAGAAGGCGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: GVPTAVEAERAELCIIPPLNSAS*IRRRFS
Trigger: TGAGAACCGCCTTCTGATTCAAGAGGCTGAATTCAG...AGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGGGCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp CAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCCATCAGTCTGGGAGCTaGTGGGATGAAGAGGTGACC +
Preference number: 4 (lower is better)
Translates to: QNGLNSVSSLLCPWTFLGHQSGS*WDEEVT
Trigger: GGTCACCTCTTCATCCCATCAGCTCCCAGACTGATG...GCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp ATCCTTCCTCTTGCAAAGGGACAAATGGAGAGCCAAAGGACAGGGGCCCATGGACCAGGCCACTACTGCTaGCCATACTCACAGCGACCA +
Preference number: 4 (lower is better)
Translates to: ILPLAKGQMESQRTGAHGPGHYC*PYSQRP
Trigger: TGGTCGCTGTGAGTATGGTCAGCAGTAGTGGCCTGG...TCCATGGGCCCCTGTCCTTTGGCTCTCCATTTGTCCCTTTGCAAGAGGAAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532062.1
CDS-3UTR GCA 90 bp GCACGACAGAGTGACCGGTCTATGACACAAAGGAGCTCAGGGCCCCTTGAGGTGGTACTGGGGCTGTGCTaGTGTGGTATTGAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: ARQSDRSMTQRSSGPLEVVLGLC*CGIEAE
Trigger: TTCAGCTTCAATACCACAGCAGCACAGCCCCAGTAC...CACCTCAAGGGGCCCTGAGCTCCTTTGTGTCATAGACCGGTCACTCTGTCGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GCACGACAGAGTGACCGGTCTATGACACAAAGGAGCTCAGGGCCCCTTGAGGTGGAAGTACTGGGGCTGTaGTGCTGTGGTATTGAAGCT +
Preference number: 4 (lower is better)
Translates to: ARQSDRSMTQRSSGPLEVEVLGL*CCGIEA
Trigger: AGCTTCAATACCACAGCAGCACAGCCCCAGTACTTC...CACCTCAAGGGGCCCTGAGCTCCTTTGTGTCATAGACCGGTCACTCTGTCGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GAGGAGGACGGGCAAAATGCAAGGCATGAAATGGGGAGGGTGTCCCTTCCATCCGACCGGTTCATCTTCTaGGAAGGGGTAGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: EEDGQNARHEMGRVSLPSDRFIF*EGVERQ
Trigger: CTGCCTTTCTACCCCTTCGCAGAAGATGAACCGGTC...GGATGGAAGGGACACCCTCCCCATTTCATGCCTTGCATTTTGCCCGTCCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GAGGAGGACGGGCAAAATGCAAGGCATGAAATGGGGAGGGTGTCCCTTCCATCCAGGGTCTTCTTCTTCTaGCTCCAGTTCTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: EEDGQNARHEMGRVSLPSRVFFF*LQFSQQ
Trigger: CTGCTGGGAGAACTGGAGGCAGAAGAAGAAGACCCT...GGATGGAAGGGACACCCTCCCCATTTCATGCCTTGCATTTTGCCCGTCCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGATCCAGACCCACCTCAAGCGGCCCATGGCAATaGACAGCTGCCGCATCTGGC +
Preference number: 4 (lower is better)
Translates to: GNATIAWRRSEKRSRPTSSGPWQ*TAAASG
Trigger: GCCAGATGCGGCAGCTGTGCATTGCCATGGGCCGCT...TGAGGTGGGTCTGGATCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278951.11
CDS-3UTR GCA 90 bp ACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCCATCATCAGGGCTGTaGCCATGGCGTAGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: TEKKAAIWPTSGGSRGAGPSSGL*PWRRKA
Trigger: GGCTTTTCTACGCCATGGGCACAGCCCTGATGATGG...GCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp AGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCGGAGCAGGTTGCAGATaGCAATGGCCAACAAGTAGG +
Preference number: 4 (lower is better)
Translates to: RRKQQFGQHLGVPGEQACGAGCR*QWPTSR
Trigger: CCTACTTGTTGGCCATTGGCATCTGCAACCTGCTCC...GCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp GGGGTGCCCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTAGTAAAGGAGCAGGTTaGAGATGCCAATGGCCAACA +
Preference number: 4 (lower is better)
Translates to: GVPTAVEAERAELCIIPPSKGAG*RCQWPT
Trigger: TGTTGGCCATTGGCATCTGCAACCTGCTCCTTTACT...AGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGGGCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp ATCCTTCCTCTTGCAAAGGGACAAATGGAGAGCCAAAGGACAGGGGCCCATGGAGTGCTCCCTCGACTCTaGAGGGGTTTTCTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: ILPLAKGQMESQRTGAHGVLPRL*RGFLPG
Trigger: ACCTGGCAGAAAACCCCTGCAGAGTCGAGGGAGCAC...TCCATGGGCCCCTGTCCTTTGGCTCTCCATTTGTCCCTTTGCAAGAGGAAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp ACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCCATAGAAAACGGAAATaGAACCATAGCATGGAGACG +
Preference number: 4 (lower is better)
Translates to: TKGIQGPGWPGCPELGQFHRKRK*NHSMET
Trigger: CGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATG...GAATTGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGATCCAGACCCACCTCAGCGAGTTTTCCGAGGTaGGGGCCCTTTAAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: GNATIAWRRSEKRSRPTSASFPR*GPFKGG
Trigger: CCCGCCCTTAAAGGGCCCGCACCTCGGAAAACTCGC...TGAGGTGGGTCTGGATCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324225.9
CDS-3UTR GCA 90 bp GGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGATCCAGACCCACCTCATCGGCAGAGGGCAGCTaGAAGGTTCCATGCCACCCC +
Preference number: 4 (lower is better)
Translates to: GNATIAWRRSEKRSRPTSSAEGS*KVPCHP
Trigger: GGGGTGGCATGGAACCTTGCAGCTGCCCTCTGCCGA...TGAGGTGGGTCTGGATCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GAGGAGGACGGGCAAAATGCAAGGCATGAAATGGGGAGGGTGTCCCTTCCATCCGTATCATCCCTCCTTTaGCCCTGGACATTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: EEDGQNARHEMGRVSLPSVSSLL*PWTFLG
Trigger: GCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATAC...GGATGGAAGGGACACCCTCCCCATTTCATGCCTTGCATTTTGCCCGTCCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp CTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCAGTGTCAATGGCACTGTCTGCGAGACGTTCTTaGGCCCCAGAACCCCCAGAT +
Preference number: 4 (lower is better)
Translates to: LYHPSFAPGHSWAVSMALSARRS*APEPPD
Trigger: ATCTGGGGGTTCTGGGGCCCAAGAACGTCTCGCAGA...CAGTGCCATTGACACTGCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp CAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCACCACAGCCTCCTTCTaGCGGACCACAAACAGCAAC +
Preference number: 4 (lower is better)
Translates to: QNGLNSVSSLLCPWTFLGTTASF*RTTNSN
Trigger: GTTGCTGTTTGTGGTCCGCCAGAAGGAGGCTGTGGT...GCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp ACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCACCACAGCCTCCTTCTaGCGGACCACAAACAGCAAC +
Preference number: 4 (lower is better)
Translates to: TEKKAAIWPTSGGSRGAGTTASF*RTTNSN
Trigger: GTTGCTGTTTGTGGTCCGCCAGAAGGAGGCTGTGGT...GCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp ACACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGCGGCTGACCCGGAGCTaGTATGTGGTGTTGACTGGT +
Preference number: 4 (lower is better)
Translates to: TLRRKQQFGQHLGVPGEQRLTRS*YVVLTG
Trigger: ACCAGTCAACACCACATACCAGCTCCGGGTCAGCCG...CTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp GGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGATCCAGACCCACCTCACCTCCACAGAGCTCATaGAGTCCACTCGGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: GNATIAWRRSEKRSRPTSPPQSS*SPLGAE
Trigger: CTCGGCCCCGAGTGGACTCCATGAGCTCTGTGGAGG...TGAGGTGGGTCTGGATCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp GAGGCTAGGACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTGAAGCCCCTGGTTGCAGATGCCAATaGCCAACAAGTAGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: EARTGHVEGNSTSLPEAPGCRCQ*PTSRKR
Trigger: TCGCTTCCTACTTGTTGGCCATTGGCATCTGCAACC...AGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTCCTAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp ACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCGGAAGGACCCGAACATaGCGATGGAGGAGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: TEKKAAIWPTSGGSRGAGGRTRT*RWRRGS
Trigger: ACTTCCTCTCCTCCATCGCCATGTTCGGGTCCTTCC...GCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp ACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCAATTTGGCCAACATCTaGGGGTTCCAGGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: TEKKAAIWPTSGGSRGAGNLANI*GFQGSR
Trigger: CCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATT...GCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp CAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCCAGCCCAAAGAGAACTaGGGCCCTGATACAGGACAG +
Preference number: 4 (lower is better)
Translates to: QNGLNSVSSLLCPWTFLGQPKEN*GPDTGQ
Trigger: CTGTCCTGTATCAGGGCCCCAGTTCTCTTTGGGCTG...GCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp ACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCTACCCCCATCCATCCTaGCTGACTGGAATGGGCAGT +
Preference number: 4 (lower is better)
Translates to: TEKKAAIWPTSGGSRGAGYPHPS*LTGMGS
Trigger: ACTGCCCATTCCAGTCAGCCAGGATGGATGGGGGTA...GCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATTAGCACCAAAAGTCTaGCACCAGCTGGCCAACCCC +
Preference number: 4 (lower is better)
Translates to: GWPGCPELGQFFVNSKVSLAPKV*HQLANP
Trigger: GGGGTTGGCCAGCTGGTGCCAGACTTTTGGTGCTAA...TGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp ACACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGTTCTCCCTCCAGTCCTaGTGCTGGCATCAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: TLRRKQQFGQHLGVPGEQFSLQS*CWHQSG
Trigger: CCCAGACTGATGCCAGCACCAGGACTGGAGGGAGAA...CTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTTTCTCCCTCCAGTCCTaGTGCTGGCATCAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: EAERAELCIIPPLPLDILFSLQS*CWHQSG
Trigger: CCCAGACTGATGCCAGCACCAGGACTGGAGGGAGAA...AAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp GAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTACTGCTCCCCAGTCCTaGGCACAAAATCGTCCATGC +
Preference number: 4 (lower is better)
Translates to: EAERAELCIIPPLPLDILTAPQS*AQNRPC
Trigger: GCATGGACGATTTTGTGCTCAGGACTGGGGAGCAGT...AAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp ATCCTTCCTCTTGCAAAGGGACAAATGGAGAGCCAAAGGACAGGGGCCCATGGAACTGCTCCCCAGTCCTaGGCACAAAATCGTCCATGC +
Preference number: 4 (lower is better)
Translates to: ILPLAKGQMESQRTGAHGTAPQS*AQNRPC
Trigger: GCATGGACGATTTTGTGCTCAGGACTGGGGAGCAGT...TCCATGGGCCCCTGTCCTTTGGCTCTCCATTTGTCCCTTTGCAAGAGGAAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp GGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCAGGACACAGCACATCCTaGATGGAGATGACTGAGCAG +
Preference number: 4 (lower is better)
Translates to: GWPGCPELGQFFVNSKVSGHSTS*MEMTEQ
Trigger: CTGCTCAGTCATCTCCATTCAGGATGTGCTGTGTCC...TGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp GAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTTCTGGTACATGCCGATaGAGGCTACGTTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: EESSNLANIWGFQGSRPASGTCR*RLRCCP
Trigger: TGGACAACAACGTAGCCTTCATCGGCATGTACCAGA...AGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp ACACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGTTGAGACACCAGCACTaGCAGGGTTTTCTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: TLRRKQQFGQHLGVPGEQLRHQH*QGFLAV
Trigger: CACCGCCAGAAAACCCTGTCAGTGCTGGTGTCTCAA...CTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp CAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCTGTCCTGATTCCCTGTaGCATTCACCACCGTCTGGT +
Preference number: 4 (lower is better)
Translates to: QNGLNSVSSLLCPWTFLGCPDSL*HSPPSG
Trigger: ACCAGACGGTGGTGAATGTCACAGGGAATCAGGACA...GCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp CTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCAGTGTCAATGGCACTGGCACAGAGAAGAAGATaGCAATGGCCAGGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: LYHPSFAPGHSWAVSMALAQRRR*QWPGRR
Trigger: ACGCCTGCCTGGCCATTGTCATCTTCTTCTCTGTGC...CAGTGCCATTGACACTGCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp GGGGTGCCCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTAACACAGAACTTGCCTaGAGACTGGACGGAAACTTA +
Preference number: 4 (lower is better)
Translates to: GVPTAVEAERAELCIIPPNTELA*RLDGNL
Trigger: TAAGTTTCCGTCCAGTCTTCAGGCAAGTTCTGTGTT...AGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGGGCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp ACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCACAGCACGACAGAGTaGCCGGTCTATGACACAAAG +
Preference number: 4 (lower is better)
Translates to: TEKKAAIWPTSGGSRGAGHSTTE*PVYDTK
Trigger: CTTTGTGTCATAGACCGGTCACTCTGTCGTGCTGTG...GCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp AGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCGGAAGGCCCCAACACTaGGAAGAAAGCAGCAATTTG +
Preference number: 4 (lower is better)
Translates to: RRKQQFGQHLGVPGEQACGRPQH*EESSNL
Trigger: CAAATTGCTGCTTTCTTCTCAGTGTTGGGGCCTTCC...GCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp AGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCAGAGAACTGGGGCCCTaGTACAGGACAGAGATTCAG +
Preference number: 4 (lower is better)
Translates to: RVARVPRAGAILCKLQGFRELGP*YRTEIQ
Trigger: CTGAATCTCTGTCCTGTATCAGGGCCCCAGTTCTCT...GAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp GAGGCTAGGACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTGAAGCCCCTCTGAATTCAGCCTCTTaGATCAGAAGGCGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: EARTGHVEGNSTSLPEAPLNSAS*IRRRFS
Trigger: TGAGAACCGCCTTCTGATTCAAGAGGCTGAATTCAG...AGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTCCTAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp GGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGATCCAGACCCACCTCAAAGGAAGGGAAGGGGTaGGGCGCTTCTCCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: GNATIAWRRSEKRSRPTSKEGKG*GASPSS
Trigger: ACTGGAGGGAGAAGCGCCTCACCCCTTCCCTTCCTT...TGAGGTGGGTCTGGATCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp ATCCTTCCTCTTGCAAAGGGACAAATGGAGAGCCAAAGGACAGGGGCCCATGGAAACGGCGCCCCCTTCTaGTTGTTCAGGACGTTCACA +
Preference number: 4 (lower is better)
Translates to: ILPLAKGQMESQRTGAHGNGAPF*LFRTFT
Trigger: TGTGAACGTCCTGAACAAGCAGAAGGGGGCGCCGTT...TCCATGGGCCCCTGTCCTTTGGCTCTCCATTTGTCCCTTTGCAAGAGGAAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GAGGCTAGGACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTGAAGCCCCTTTTGGTAGAGGTACTTaGGCTGAAACATCCCTCGCA +
Preference number: 4 (lower is better)
Translates to: EARTGHVEGNSTSLPEAPFGRGT*AETSLA
Trigger: TGCGAGGGATGTTTCAGCGCAAGTACCTCTACCAAA...AGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTCCTAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GAGGCTAGGACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTGAAGCCCCTCCTCATAAGGGGAACTaGCAGGAAAAGAATCAGCCA +
Preference number: 4 (lower is better)
Translates to: EARTGHVEGNSTSLPEAPPHKGN*QEKNQP
Trigger: TGGCTGATTCTTTTCCTGGCAGTTCCCCTTATGAGG...AGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTCCTAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAAAGAGAGGTCCCCAGTaGCAGCGCTGTCAACCAGAC +
Preference number: 4 (lower is better)
Translates to: VARVPRAGAILCKLQGFIKRGPQ*QRCQPD
Trigger: GTCTGGTTGACAGCGCTGGCACTGGGGACCTCTCTT...TATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GCACGACAGAGTGACCGGTCTATGACACAAAGGAGCTCAGGGCCCCTTGAGGTGTGGTTGATCTCCCGTTaGAGGATGATGAGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: ARQSDRSMTQRSSGPLEVWLISR*RMMSRK
Trigger: TTTCCTGCTCATCATCCTGCAACGGGAGATCAACCA...CACCTCAAGGGGCCCTGAGCTCCTTTGTGTCATAGACCGGTCACTCTGTCGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAACGCCGTGTTCCCTTTaGCAAAGACCACGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: VARVPRAGAILCKLQGFITPCSL*QRPRPA
Trigger: TGCTGGGCGTGGTCTTTGGCAAAGGGAACACGGCGT...TATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATATCTGCAGGGGTTTTCTaGCAGGTGCTGAGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: VARVPRAGAILCKLQGFISAGVF*QVLSPW
Trigger: CCAGGGACTCAGCACCTGGCAGAAAACCCCTGCAGA...TATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp CAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCATGGAGGAGAGGAAGTaGCAGATGTCGTGGTCGTCA +
Preference number: 4 (lower is better)
Translates to: QNGLNSVSSLLCPWTFLGMEERK*QMSWSS
Trigger: TGACGACCACGACATCTGGCACTTCCTCTCCTCCAT...GCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp AGGACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTGAAGCCCCTTTAGTAAGAGAAGGAGGCAGCTaGTACCTTCACGTACCCACC +
Preference number: 4 (lower is better)
Translates to: RTGHVEGNSTSLPEAPLVREGGS*YLHVPT
Trigger: GGTGGGTACGTGAAGGTAGCAGCTGCCTCCTTCTCT...TACTAAAGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278951.11
CDS-3UTR CCA 90 bp GAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTACCACAGCCTCCTTCTaGCGGACCACAAACAGCAAC +
Preference number: 4 (lower is better)
Translates to: EAERAELCIIPPLPLDILTTASF*RTTNSN
Trigger: GTTGCTGTTTGTGGTCCGCCAGAAGGAGGCTGTGGT...AAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp GTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAAGGATTAGGGGCACCTaGAAGGACACCACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: VARVPRAGAILCKLQGFIRIRGT*KDTTAS
Trigger: GGAGGCTGTGGTGTCCTTCCAGGTGCCCCTAATCCT...TATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp GCACGACAGAGTGACCGGTCTATGACACAAAGGAGCTCAGGGCCCCTTGAGGTGTCATACTTGAAGTACTaGGGCTGTGCTGCTGTGGTA +
Preference number: 4 (lower is better)
Translates to: ARQSDRSMTQRSSGPLEVSYLKY*GCAAVV
Trigger: TACCACAGCAGCACAGCCCCAGTACTTCAAGTATGA...CACCTCAAGGGGCCCTGAGCTCCTTTGTGTCATAGACCGGTCACTCTGTCGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp GAGGCTAGGACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTGAAGCCCCTTTCTTGGTCATCGTCTaGTACATGCCGATGAAGGCT +
Preference number: 4 (lower is better)
Translates to: EARTGHVEGNSTSLPEAPFLVIV*YMPMKA
Trigger: AGCCTTCATCGGCATGTACCAGACGATGACCAAGAA...AGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTCCTAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp GGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGATCCAGACCCACCTCAGGCAGGCTCGGTCAATaGCCACCAGCAGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GNATIAWRRSEKRSRPTSGRLGQ*PPAGSS
Trigger: AGAAGACCCTGCTGGTGGCCATTGACCGAGCCTGCC...TGAGGTGGGTCTGGATCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp AATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGCATAGAAGACAGCAATaGTGGCAATGTTCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: NLANIWGFQGSRPAPRQRHRRQQ*WQCSRS
Trigger: ACTTCTGGAACATTGCCACCATTGCTGTCTTCTATG...CCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp AGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGCATAGAAGACAGCAATaGTGGCAATGTTCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: SNLANIWGFQGSRPAPRQHRRQQ*WQCSRS
Trigger: ACTTCTGGAACATTGCCACCATTGCTGTCTTCTATG...CTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp CAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGGAAATTGGTATAGTTaGGGCACACATGATAGCAAG +
Preference number: 4 (lower is better)
Translates to: QFGQHLGVPGEQACSSAEGNWYS*GTHDSK
Trigger: CTTGCTATCATGTGTGCCCCAACTATACCAATTTCC...CTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp AGGACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTGAAGCCCCTTTAGTAACCCGAACATGGCGATaGAGGAGAGGAAGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: RTGHVEGNSTSLPEAPLVTRTWR*RRGSAR
Trigger: TCTGGCACTTCCTCTCCTCCATCGCCATGTTCGGGT...TACTAAAGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278951.11
CDS-3UTR CCA 90 bp CTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCAGTGTCAATGGCACTGACCCGAACATGGCGATaGAGGAGAGGAAGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: LYHPSFAPGHSWAVSMALTRTWR*RRGSAR
Trigger: TCTGGCACTTCCTCTCCTCCATCGCCATGTTCGGGT...CAGTGCCATTGACACTGCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp ATCCTTCCTCTTGCAAAGGGACAAATGGAGAGCCAAAGGACAGGGGCCCATGGAACCCGAACATGGCGATaGAGGAGAGGAAGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: ILPLAKGQMESQRTGAHGTRTWR*RRGSAR
Trigger: TCTGGCACTTCCTCTCCTCCATCGCCATGTTCGGGT...TCCATGGGCCCCTGTCCTTTGGCTCTCCATTTGTCCCTTTGCAAGAGGAAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAAATGCAACCATAGCATaGAGACGCTCTGAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: AIWPTSGGSRGAGLLLGRNATIA*RRSEKR
Trigger: TCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATT...TCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp GTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAAAGGACAGGGGCCCATaGAAGGCCCCAACACTGAGA +
Preference number: 4 (lower is better)
Translates to: VARVPRAGAILCKLQGFIKDRGP*KAPTLR
Trigger: TCTCAGTGTTGGGGCCTTCCATGGGCCCCTGTCCTT...TATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTTACCCCCATCCATCCTaGCTGACTGGAATGGGCAGT +
Preference number: 4 (lower is better)
Translates to: EAERAELCIIPPLPLDILYPHPS*LTGMGS
Trigger: ACTGCCCATTCCAGTCAGCCAGGATGGATGGGGGTA...AAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp ATCCTTCCTCTTGCAAAGGGACAAATGGAGAGCCAAAGGACAGGGGCCCATGGATTAGCACCAAAAGTCTaGCACCAGCTGGCCAACCCC +
Preference number: 4 (lower is better)
Translates to: ILPLAKGQMESQRTGAHGLAPKV*HQLANP
Trigger: GGGGTTGGCCAGCTGGTGCCAGACTTTTGGTGCTAA...TCCATGGGCCCCTGTCCTTTGGCTCTCCATTTGTCCCTTTGCAAGAGGAAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GCACGACAGAGTGACCGGTCTATGACACAAAGGAGCTCAGGGCCCCTTGAGGTGAGGCGGTTCTCAAATTaGGCTGAGCGCATTGCTAAA +
Preference number: 4 (lower is better)
Translates to: ARQSDRSMTQRSSGPLEVRRFSN*AERIAK
Trigger: TTTAGCAATGCGCTCAGCCCAATTTGAGAACCGCCT...CACCTCAAGGGGCCCTGAGCTCCTTTGTGTCATAGACCGGTCACTCTGTCGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp ATCCTTCCTCTTGCAAAGGGACAAATGGAGAGCCAAAGGACAGGGGCCCATGGATGTTGGAGGTCACCTTaGCAATTACCGAGTCCACGC +
Preference number: 4 (lower is better)
Translates to: ILPLAKGQMESQRTGAHGCWRSP*QLPSPR
Trigger: GCGTGGACTCGGTAATTGTCAAGGTGACCTCCAACA...TCCATGGGCCCCTGTCCTTTGGCTCTCCATTTGTCCCTTTGCAAGAGGAAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp AGGACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTGAAGCCCCTTTAGTATGTCCTGATTCCCTGTaGCATTCACCACCGTCTGGT +
Preference number: 4 (lower is better)
Translates to: RTGHVEGNSTSLPEAPLVCPDSL*HSPPSG
Trigger: ACCAGACGGTGGTGAATGTCACAGGGAATCAGGACA...TACTAAAGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278951.11
CDS-3UTR TCA 90 bp GAGGAGGACGGGCAAAATGCAAGGCATGAAATGGGGAGGGTGTCCCTTCCATCCCGGCGATCATGTACATaGACGATGTGTCAAACTGGA +
Preference number: 4 (lower is better)
Translates to: EEDGQNARHEMGRVSLPSRRSCT*TMCQTG
Trigger: TCCAGTTTGACACATCGTTCATGTACATGATCGCCG...GGATGGAAGGGACACCCTCCCCATTTCATGCCTTGCATTTTGCCCGTCCTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp GCACGACAGAGTGACCGGTCTATGACACAAAGGAGCTCAGGGCCCCTTGAGGTGAACACAGAACTTGCCTaGAGACTGGACGGAAACTTA +
Preference number: 4 (lower is better)
Translates to: ARQSDRSMTQRSSGPLEVNTELA*RLDGNL
Trigger: TAAGTTTCCGTCCAGTCTTCAGGCAAGTTCTGTGTT...CACCTCAAGGGGCCCTGAGCTCCTTTGTGTCATAGACCGGTCACTCTGTCGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp ACACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCAAAATGCAAGGCATaGAATGGGGAGGGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: TLRRKQQFGQHLGVPGEQAKCKA*NGEGVP
Trigger: AGGGACACCCTCCCCATTTCATGCCTTGCATTTTGC...CTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp CAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCGATGGGATGAAGAGGTaGCCTCTGAATTCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: QNGLNSVSSLLCPWTFLGDGMKR*PLNSAS
Trigger: AGAGGCTGAATTCAGAGGTCACCTCTTCATCCCATC...GCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp AGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCGAAGTACTGGGGCTGTaGTGCTGTGGTATTGAAGCT +
Preference number: 4 (lower is better)
Translates to: RVARVPRAGAILCKLQGFEVLGL*CCGIEA
Trigger: AGCTTCAATACCACAGCAGCACAGCCCCAGTACTTC...GAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp CAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCGAAGTACTGGGGCTGTaGTGCTGTGGTATTGAAGCT +
Preference number: 4 (lower is better)
Translates to: QNGLNSVSSLLCPWTFLGEVLGL*CCGIEA
Trigger: AGCTTCAATACCACAGCAGCACAGCCCCAGTACTTC...GCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp ACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCGAAGTACTGGGGCTGTaGTGCTGTGGTATTGAAGCT +
Preference number: 4 (lower is better)
Translates to: TEKKAAIWPTSGGSRGAGEVLGL*CCGIEA
Trigger: AGCTTCAATACCACAGCAGCACAGCCCCAGTACTTC...GCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTCATCCCACTGACGTATaGCTCAGACGTGACTGCTTG +
Preference number: 4 (lower is better)
Translates to: EAERAELCIIPPLPLDILHPTDV*LRRDCL
Trigger: CAAGCAGTCACGTCTGAGGCATACGTCAGTGGGATG...AAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GAGGAGGACGGGCAAAATGCAAGGCATGAAATGGGGAGGGTGTCCCTTCCATCCCCTCATAAGGGGAACTaGCAGGAAAAGAATCAGCCA +
Preference number: 4 (lower is better)
Translates to: EEDGQNARHEMGRVSLPSPHKGN*QEKNQP
Trigger: TGGCTGATTCTTTTCCTGGCAGTTCCCCTTATGAGG...GGATGGAAGGGACACCCTCCCCATTTCATGCCTTGCATTTTGCCCGTCCTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp AGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTGGTTGATCTCCCGTTaGAGGATGATGAGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: RRKQQFGQHLGVPGEQACWLISR*RMMSRK
Trigger: TTTCCTGCTCATCATCCTGCAACGGGAGATCAACCA...GCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTTGGTTGATCTCCCGTTaGAGGATGATGAGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: EESSNLANIWGFQGSRPAWLISR*RMMSRK
Trigger: TTTCCTGCTCATCATCCTGCAACGGGAGATCAACCA...AGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATACCATCATCAGGGCTGTaGCCATGGCGTAGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: VARVPRAGAILCKLQGFIPSSGL*PWRRKA
Trigger: GGCTTTTCTACGCCATGGGCACAGCCCTGATGATGG...TATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAGGTATGTGTGTGCATGACCGTAGAGCGGCCCGCTaGACTGCCGGATGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: AGAILCKLQGFIGMCVHDRRAAR*TAGCSL
Trigger: CAGACTGCATCCGGCAGTGCAGCGGGCCGCTCTACG...GTCATGCACACACATACCTATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTATGGAGGAGAGGAAGTaGCAGATGTCGTGGTCGTCA +
Preference number: 4 (lower is better)
Translates to: EAERAELCIIPPLPLDILMEERK*QMSWSS
Trigger: TGACGACCACGACATCTGGCACTTCCTCTCCTCCAT...AAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp CCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCGTGCTCTTCCTGCCCTaGCTAGGCATGTTTTATTAT +
Preference number: 4 (lower is better)
Translates to: PQLWRQNGLNSVSSLLCPVLFLP*LGMFYY
Trigger: ATAATAAAACATGCCTAGGCAGGGCAGGAAGAGCAC...GGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532062.1
CDS-3UTR CCA 90 bp GCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAGGTATGTGTGTGCATGACCCCAGAACCCCCAGATaGCTCTCGACCGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: AGAILCKLQGFIGMCVHDPRTPR*LSTEAT
Trigger: GGTGGCCTCGGTCGAGAGCCATCTGGGGGTTCTGGG...GTCATGCACACACATACCTATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp GGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGATCCAGACCCACCTCACGGCTGACCCGGAGCTaGTATGTGGTGTTGACTGGT +
Preference number: 4 (lower is better)
Translates to: GNATIAWRRSEKRSRPTSRLTRS*YVVLTG
Trigger: ACCAGTCAACACCACATACCAGCTCCGGGTCAGCCG...TGAGGTGGGTCTGGATCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp AGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCATACTTGAAGTACTaGGGCTGTGCTGCTGTGGTA +
Preference number: 4 (lower is better)
Translates to: RRKQQFGQHLGVPGEQACSYLKY*GCAAVV
Trigger: TACCACAGCAGCACAGCCCCAGTACTTCAAGTATGA...GCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp GAGGAGGACGGGCAAAATGCAAGGCATGAAATGGGGAGGGTGTCCCTTCCATCCTTCTTGGTCATCGTCTaGTACATGCCGATGAAGGCT +
Preference number: 4 (lower is better)
Translates to: EEDGQNARHEMGRVSLPSFLVIV*YMPMKA
Trigger: AGCCTTCATCGGCATGTACCAGACGATGACCAAGAA...GGATGGAAGGGACACCCTCCCCATTTCATGCCTTGCATTTTGCCCGTCCTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp AGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCAAAGCCCAAAGTGTTTaGGGATCCCACATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RVARVPRAGAILCKLQGFKAQSV*GSHIPG
Trigger: CCCTGGAATGTGGGATCCCCAAACACTTTGGGCTTT...GAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp GCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAGGTATGTGTGTGCATGACGCTGCCATCCAGTGCTaGGCAGCGGTGCTGGGACTC +
Preference number: 4 (lower is better)
Translates to: AGAILCKLQGFIGMCVHDAAIQC*AAVLGL
Trigger: GAGTCCCAGCACCGCTGCCCAGCACTGGATGGCAGC...GTCATGCACACACATACCTATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATATTAGCACCAAAAGTCTaGCACCAGCTGGCCAACCCC +
Preference number: 4 (lower is better)
Translates to: VARVPRAGAILCKLQGFILAPKV*HQLANP
Trigger: GGGGTTGGCCAGCTGGTGCCAGACTTTTGGTGCTAA...TATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAGCCCCTGGACATTCTTaGGCAGTGTCAATGGCACTG +
Preference number: 4 (lower is better)
Translates to: VARVPRAGAILCKLQGFIAPGHS*AVSMAL
Trigger: CAGTGCCATTGACACTGCCCAAGAATGTCCAGGGGC...TATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp GGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGATCCAGACCCACCTCATGTGGTGTTGACTGGTaGCAGGGTGGACACATCCAC +
Preference number: 4 (lower is better)
Translates to: GNATIAWRRSEKRSRPTSCGVDW*QGGHIH
Trigger: GTGGATGTGTCCACCCTGTCACCAGTCAACACCACA...TGAGGTGGGTCTGGATCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp ATCCTTCCTCTTGCAAAGGGACAAATGGAGAGCCAAAGGACAGGGGCCCATGGATCTGGTACATGCCGATaGAGGCTACGTTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: ILPLAKGQMESQRTGAHGSGTCR*RLRCCP
Trigger: TGGACAACAACGTAGCCTTCATCGGCATGTACCAGA...TCCATGGGCCCCTGTCCTTTGGCTCTCCATTTGTCCCTTTGCAAGAGGAAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp GGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGATCCAGACCCACCTCATCAGACGTGACTGCTTaGGACACCAGCACTGACAGG +
Preference number: 4 (lower is better)
Translates to: GNATIAWRRSEKRSRPTSSDVTA*DTSTDR
Trigger: CCTGTCAGTGCTGGTGTCTCAAGCAGTCACGTCTGA...TGAGGTGGGTCTGGATCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp GGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGATCCAGACCCACCTCACGTATGCCTCAGACGTaGCTGCTTGAGACACCAGCA +
Preference number: 4 (lower is better)
Translates to: GNATIAWRRSEKRSRPTSRMPQT*LLETPA
Trigger: TGCTGGTGTCTCAAGCAGTCACGTCTGAGGCATACG...TGAGGTGGGTCTGGATCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp GAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTATTGCTTGGTGCGAATaGCATTCTTGTCGGAATCGA +
Preference number: 4 (lower is better)
Translates to: EESSNLANIWGFQGSRPAIAWCE*HSCRNR
Trigger: TCGATTCCGACAAGAATGTCATTCGCACCAAGCAAT...AGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp AGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCCGGCGATCATGTACATaGACGATGTGTCAAACTGGA +
Preference number: 4 (lower is better)
Translates to: RVARVPRAGAILCKLQGFRRSCT*TMCQTG
Trigger: TCCAGTTTGACACATCGTTCATGTACATGATCGCCG...GAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp ACACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGATGGGATGAAGAGGTaGCCTCTGAATTCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: TLRRKQQFGQHLGVPGEQDGMKR*PLNSAS
Trigger: AGAGGCTGAATTCAGAGGTCACCTCTTCATCCCATC...CTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp GGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATTTGGTAGAGGTACTTaGGCTGAAACATCCCTCGCA +
Preference number: 4 (lower is better)
Translates to: GWPGCPELGQFFVNSKVSFGRGT*AETSLA
Trigger: TGCGAGGGATGTTTCAGCGCAAGTACCTCTACCAAA...TGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGTACTGGGGCTGTGCTaGTGTGGTATTGAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: EAERAELCIIPPLPLDILVLGLC*CGIEAE
Trigger: TTCAGCTTCAATACCACAGCAGCACAGCCCCAGTAC...AAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAGACCGGTTCATCTTCTaGGAAGGGGTAGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: VARVPRAGAILCKLQGFIDRFIF*EGVERQ
Trigger: CTGCCTTTCTACCCCTTCGCAGAAGATGAACCGGTC...TATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAAGGGTCTTCTTCTTCTaGCTCCAGTTCTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: VARVPRAGAILCKLQGFIRVFFF*LQFSQQ
Trigger: CTGCTGGGAGAACTGGAGGCAGAAGAAGAAGACCCT...TATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp ACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCCTCATAAGGGGAACTaGCAGGAAAAGAATCAGCCA +
Preference number: 4 (lower is better)
Translates to: TEKKAAIWPTSGGSRGAGPHKGN*QEKNQP
Trigger: TGGCTGATTCTTTTCCTGGCAGTTCCCCTTATGAGG...GCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCAAGTAAAGGAGCAGGTTaGAGATGCCAATGGCCAACA +
Preference number: 4 (lower is better)
Translates to: GWPGCPELGQFFVNSKVSSKGAG*RCQWPT
Trigger: TGTTGGCCATTGGCATCTGCAACCTGCTCCTTTACT...TGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp AGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCTCATACTTGAAGTACTaGGGCTGTGCTGCTGTGGTA +
Preference number: 4 (lower is better)
Translates to: RVARVPRAGAILCKLQGFSYLKY*GCAAVV
Trigger: TACCACAGCAGCACAGCCCCAGTACTTCAAGTATGA...GAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp GGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATTCTTGGTCATCGTCTaGTACATGCCGATGAAGGCT +
Preference number: 4 (lower is better)
Translates to: GWPGCPELGQFFVNSKVSFLVIV*YMPMKA
Trigger: AGCCTTCATCGGCATGTACCAGACGATGACCAAGAA...TGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp GAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTAAAGCCCAAAGTGTTTaGGGATCCCACATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: EAERAELCIIPPLPLDILKAQSV*GSHIPG
Trigger: CCCTGGAATGTGGGATCCCCAAACACTTTGGGCTTT...AAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp ATCCTTCCTCTTGCAAAGGGACAAATGGAGAGCCAAAGGACAGGGGCCCATGGAGGTTGCAGATGCCAATaGCCAACAAGTAGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: ILPLAKGQMESQRTGAHGGCRCQ*PTSRKR
Trigger: TCGCTTCCTACTTGTTGGCCATTGGCATCTGCAACC...TCCATGGGCCCCTGTCCTTTGGCTCTCCATTTGTCCCTTTGCAAGAGGAAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CCA 90 bp GGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGATCCAGACCCACCTCAAGTGTCAGCAACACCTaGGGTGTGGACGCCAGATCA +
Preference number: 4 (lower is better)
Translates to: GNATIAWRRSEKRSRPTSSVSNT*GVDARS
Trigger: TGATCTGGCGTCCACACCCCAGGTGTTGCTGACACT...TGAGGTGGGTCTGGATCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278951.11
CDS-3UTR CCA 90 bp GAGGCTAGGACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTGAAGCCCCTAATGCAACCATAGCATaGAGACGCTCTGAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: EARTGHVEGNSTSLPEAPNATIA*RRSEKR
Trigger: TCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATT...AGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTCCTAGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp CTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCAGTGTCAATGGCACTGCGGCGATCATGTACATaGACGATGTGTCAAACTGGA +
Preference number: 4 (lower is better)
Translates to: LYHPSFAPGHSWAVSMALRRSCT*TMCQTG
Trigger: TCCAGTTTGACACATCGTTCATGTACATGATCGCCG...CAGTGCCATTGACACTGCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp AGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCAACACAGAACTTGCCTaGAGACTGGACGGAAACTTA +
Preference number: 4 (lower is better)
Translates to: RVARVPRAGAILCKLQGFNTELA*RLDGNL
Trigger: TAAGTTTCCGTCCAGTCTTCAGGCAAGTTCTGTGTT...GAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp ACACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGTTTGGTAGAGGTACTTaGGCTGAAACATCCCTCGCA +
Preference number: 4 (lower is better)
Translates to: TLRRKQQFGQHLGVPGEQFGRGT*AETSLA
Trigger: TGCGAGGGATGTTTCAGCGCAAGTACCTCTACCAAA...CTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp AGGACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTGAAGCCCCTTTAGTATGGTTGATCTCCCGTTaGAGGATGATGAGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: RTGHVEGNSTSLPEAPLVWLISR*RMMSRK
Trigger: TTTCCTGCTCATCATCCTGCAACGGGAGATCAACCA...TACTAAAGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278951.11
CDS-3UTR GCA 90 bp TCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGACGTAGAGCGGCCCGCTaGACTGCCGGATGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: SFIENGNATIAWRRSEKRRRAAR*TAGCSL
Trigger: CAGACTGCATCCGGCAGTGCAGCGGGCCGCTCTACG...TCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGATCCAGACCCACCTCAGGAGCAGGTTGCAGATaGCAATGGCCAACAAGTAGG +
Preference number: 4 (lower is better)
Translates to: GNATIAWRRSEKRSRPTSGAGCR*QWPTSR
Trigger: CCTACTTGTTGGCCATTGGCATCTGCAACCTGCTCC...TGAGGTGGGTCTGGATCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTAGTAAAGGAGCAGGTTaGAGATGCCAATGGCCAACA +
Preference number: 4 (lower is better)
Translates to: EAERAELCIIPPLPLDILSKGAG*RCQWPT
Trigger: TGTTGGCCATTGGCATCTGCAACCTGCTCCTTTACT...AAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp GCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAGGTATGTGTGTGCATGACCCCAGACCACGGAGGTaGAAACGATGCAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: AGAILCKLQGFIGMCVHDPRPRR*KRCRAG
Trigger: CCCTGCTCTGCATCGTTTGCACCTCCGTGGTCTGGG...GTCATGCACACACATACCTATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp AATTCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAGGGACGGGTTGCGGCTaGGGCCGCAGCTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: NSFIENGNATIAWRRSEKGTGCG*GRSFQH
Trigger: ATGCTGGAAGCTGCGGCCGCAGCCGCAACCCGTCCC...TTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324225.9
CDS-3UTR GCA 90 bp GCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAGGTATGTGTGTGCATGACGAAGAGAATACGCACTaGCCCAGGCCCCTTGCAGGC +
Preference number: 4 (lower is better)
Translates to: AGAILCKLQGFIGMCVHDEENTH*PRPLAG
Trigger: GCCTGCAAGGGGCCTGGGGCAGTGCGTATTCTCTTC...GTCATGCACACACATACCTATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp GGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGATCCAGACCCACCTCAGTATCATCCCTCCTTTaGCCCTGGACATTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: GNATIAWRRSEKRSRPTSVSSLL*PWTFLG
Trigger: GCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATAC...TGAGGTGGGTCTGGATCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp GTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAAAAGCCCAAAGTGTTTaGGGATCCCACATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: VARVPRAGAILCKLQGFIKAQSV*GSHIPG
Trigger: CCCTGGAATGTGGGATCCCCAAACACTTTGGGCTTT...TATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp CTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCAGTGTCAATGGCACTGAGGCGGTTCTCAAATTaGGCTGAGCGCATTGCTAAA +
Preference number: 4 (lower is better)
Translates to: LYHPSFAPGHSWAVSMALRRFSN*AERIAK
Trigger: TTTAGCAATGCGCTCAGCCCAATTTGAGAACCGCCT...CAGTGCCATTGACACTGCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp TCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGATGTAGGCGCTGGCGTTaGTGTCCGGGTGCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: SFIENGNATIAWRRSEKRCRRWR*CPGAAS
Trigger: AGAAGCGGCACCCGGACATCAACGCCAGCGCCTACA...TCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp CTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCAGTGTCAATGGCACTGAACACAGAACTTGCCTaGAGACTGGACGGAAACTTA +
Preference number: 4 (lower is better)
Translates to: LYHPSFAPGHSWAVSMALNTELA*RLDGNL
Trigger: TAAGTTTCCGTCCAGTCTTCAGGCAAGTTCTGTGTT...CAGTGCCATTGACACTGCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp GTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATACCACATAAAAGCTGTTaGTGGGGAAGTCTTTGCGCT +
Preference number: 4 (lower is better)
Translates to: VARVPRAGAILCKLQGFIPHKSC*WGSLCA
Trigger: AGCGCAAAGACTTCCCCAGCAACAGCTTTTATGTGG...TATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATACCTCATAAGGGGAACTaGCAGGAAAAGAATCAGCCA +
Preference number: 4 (lower is better)
Translates to: VARVPRAGAILCKLQGFIPHKGN*QEKNQP
Trigger: TGGCTGATTCTTTTCCTGGCAGTTCCCCTTATGAGG...TATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp AATTCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAACGTAGAGCGGCCCGCTaGACTGCCGGATGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: NSFIENGNATIAWRRSEKRRAAR*TAGCSL
Trigger: CAGACTGCATCCGGCAGTGCAGCGGGCCGCTCTACG...TTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp CAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCCATAGAAAACGGAAATaGAACCATAGCATGGAGACG +
Preference number: 4 (lower is better)
Translates to: QNGLNSVSSLLCPWTFLGHRKRK*NHSMET
Trigger: CGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATG...GCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp ACACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGAGCCCCCATGTCTTATaGCCAACATTTGGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: TLRRKQQFGQHLGVPGEQSPHVL*PTFGSC
Trigger: ACAACTTCCAAATGTTGGGCATAAGACATGGGGGCT...CTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000532062.1
CDS-3UTR CCA 90 bp GCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAGGTATGTGTGTGCATGACTCTGCGAGACGTTCTTaGGCCCCAGAACCCCCAGAT +
Preference number: 4 (lower is better)
Translates to: AGAILCKLQGFIGMCVHDSARRS*APEPPD
Trigger: ATCTGGGGGTTCTGGGGCCCAAGAACGTCTCGCAGA...GTCATGCACACACATACCTATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp AGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCGGAAATTGGTATAGTTaGGGCACACATGATAGCAAG +
Preference number: 4 (lower is better)
Translates to: RVARVPRAGAILCKLQGFGNWYS*GTHDSK
Trigger: CTTGCTATCATGTGTGCCCCAACTATACCAATTTCC...GAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp TCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGAATCCAAGGACCAGGGTaGCCAGGGTGCCCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SFIENGNATIAWRRSEKRIQGPG*PGCPEL
Trigger: CAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGAT...TCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp GCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAGGTATGTGTGTGCATGACAAGGACAGGGGCCCATaGAAGGCCCCAACACTGAGA +
Preference number: 4 (lower is better)
Translates to: AGAILCKLQGFIGMCVHDKDRGP*KAPTLR
Trigger: TCTCAGTGTTGGGGCCTTCCATGGGCCCCTGTCCTT...GTCATGCACACACATACCTATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp GCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAGGTATGTGTGTGCATGACACTGCTCCCCAGTCCTaGGCACAAAATCGTCCATGC +
Preference number: 4 (lower is better)
Translates to: AGAILCKLQGFIGMCVHDTAPQS*AQNRPC
Trigger: GCATGGACGATTTTGTGCTCAGGACTGGGGAGCAGT...GTCATGCACACACATACCTATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp GCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAGGTATGTGTGTGCATGACTTCTGGCGGTGCCCTTaGTCGACCGGTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: AGAILCKLQGFIGMCVHDFWRCP*STGSSS
Trigger: AGAAGATGAACCGGTCGATCAAGGGCACCGCCAGAA...GTCATGCACACACATACCTATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp GCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAGGTATGTGTGTGCATGACTCAGACGTGACTGCTTaGGACACCAGCACTGACAGG +
Preference number: 4 (lower is better)
Translates to: AGAILCKLQGFIGMCVHDSDVTA*DTSTDR
Trigger: CCTGTCAGTGCTGGTGTCTCAAGCAGTCACGTCTGA...GTCATGCACACACATACCTATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp GCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAGGTATGTGTGTGCATGACCGTATGCCTCAGACGTaGCTGCTTGAGACACCAGCA +
Preference number: 4 (lower is better)
Translates to: AGAILCKLQGFIGMCVHDRMPQT*LLETPA
Trigger: TGCTGGTGTCTCAAGCAGTCACGTCTGAGGCATACG...GTCATGCACACACATACCTATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp TCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGACCACCGTCTGGTAGGTaGTCACCAGCTGCACCACAG +
Preference number: 4 (lower is better)
Translates to: SFIENGNATIAWRRSEKRPPSGR*SPAAPQ
Trigger: CTGTGGTGCAGCTGGTGATCACCTACCAGACGGTGG...TCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp TCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGACCCAGACCACGGAGGTaGAAACGATGCAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SFIENGNATIAWRRSEKRPRPRR*KRCRAG
Trigger: CCCTGCTCTGCATCGTTTGCACCTCCGTGGTCTGGG...TCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp AATTCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGCTACCCGACGCCGTaGTGGGCTGCGAGTTTTCCG +
Preference number: 4 (lower is better)
Translates to: NSFIENGNATIAWRRSEKSYPTP*WAASFP
Trigger: CGGAAAACTCGCAGCCCAGCACGGCGTCGGGTAGCT...TTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324225.9
CDS-3UTR CCA 90 bp ACACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGGAAATTGGTATAGTTaGGGCACACATGATAGCAAG +
Preference number: 4 (lower is better)
Translates to: TLRRKQQFGQHLGVPGEQGNWYS*GTHDSK
Trigger: CTTGCTATCATGTGTGCCCCAACTATACCAATTTCC...CTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp GCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAGGTATGTGTGTGCATGACTCCCTCCTTTGCCCCTaGACATTCTTGGGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: AGAILCKLQGFIGMCVHDSLLCP*TFLGSV
Trigger: GACACTGCCCAAGAATGTCCAGGGGCAAAGGAGGGA...GTCATGCACACACATACCTATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp TCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGAAAGAGAGGTCCCCAGTaGCAGCGCTGTCAACCAGAC +
Preference number: 4 (lower is better)
Translates to: SFIENGNATIAWRRSEKRKRGPQ*QRCQPD
Trigger: GTCTGGTTGACAGCGCTGGCACTGGGGACCTCTCTT...TCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAGGTATGTGTGTGCATGACGGAGCAGGTTGCAGATaGCAATGGCCAACAAGTAGG +
Preference number: 4 (lower is better)
Translates to: AGAILCKLQGFIGMCVHDGAGCR*QWPTSR
Trigger: CCTACTTGTTGGCCATTGGCATCTGCAACCTGCTCC...GTCATGCACACACATACCTATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp AATTCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAATGCAGTCCCGGTTGTaGTCCCTCGACTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: NSFIENGNATIAWRRSEKMQSRL*SLDSAG
Trigger: CCCTGCAGAGTCGAGGGAGCACAACCGGGACTGCAT...TTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp TCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGACCGACTCATTCTTGGTaGGGGGCTGACACAGGGTTC +
Preference number: 4 (lower is better)
Translates to: SFIENGNATIAWRRSEKRPTHSW*GADTGF
Trigger: GAACCCTGTGTCAGCCCCCCACCAAGAATGAGTCGG...TCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp TCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGAGCTGAGATTGCCCAGTaGGTGGGCGCAGAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: SFIENGNATIAWRRSEKRAEIAQ*VGAEEV
Trigger: AACTTCCTCTGCGCCCACCCACTGGGCAATCTCAGC...TCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp TCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGATTCTGGCGGTGCCCTTaGTCGACCGGTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: SFIENGNATIAWRRSEKRFWRCP*STGSSS
Trigger: AGAAGATGAACCGGTCGATCAAGGGCACCGCCAGAA...TCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp AATTCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAACTCGGCGTCTTTCTaGGAGACGTTCTTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: NSFIENGNATIAWRRSEKNSASF*ETFLGP
Trigger: GGGGCCCAAGAACGTCTCGCAGAAAGACGCCGAGTT...TTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGATCCAGACCCACCTCACATAGAAAACGGAAATaGAACCATAGCATGGAGACG +
Preference number: 4 (lower is better)
Translates to: GNATIAWRRSEKRSRPTSHRKRK*NHSMET
Trigger: CGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATG...TGAGGTGGGTCTGGATCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp AATTCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGGATTAGGGGCACCTaGAAGGACACCACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: NSFIENGNATIAWRRSEKRIRGT*KDTTAS
Trigger: GGAGGCTGTGGTGTCCTTCCAGGTGCCCCTAATCCT...TTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp AATTCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAATGTGGTGTTGACTGGTaGCAGGGTGGACACATCCAC +
Preference number: 4 (lower is better)
Translates to: NSFIENGNATIAWRRSEKCGVDW*QGGHIH
Trigger: GTGGATGTGTCCACCCTGTCACCAGTCAACACCACA...TTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp AATTCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAATTGAGACACCAGCACTaGCAGGGTTTTCTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: NSFIENGNATIAWRRSEKLRHQH*QGFLAV
Trigger: CACCGCCAGAAAACCCTGTCAGTGCTGGTGTCTCAA...TTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp TCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGACACAGCACGACAGAGTaGCCGGTCTATGACACAAAG +
Preference number: 4 (lower is better)
Translates to: SFIENGNATIAWRRSEKRHSTTE*PVYDTK
Trigger: CTTTGTGTCATAGACCGGTCACTCTGTCGTGCTGTG...TCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAGGTATGTGTGTGCATGACCCACATAAAAGCTGTTaGTGGGGAAGTCTTTGCGCT +
Preference number: 4 (lower is better)
Translates to: AGAILCKLQGFIGMCVHDPHKSC*WGSLCA
Trigger: AGCGCAAAGACTTCCCCAGCAACAGCTTTTATGTGG...GTCATGCACACACATACCTATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp AATTCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAACGCTTGTCCTTCCGTaGCAGGTCAGCCACATAGAG +
Preference number: 4 (lower is better)
Translates to: NSFIENGNATIAWRRSEKTLVLP*QVSHIE
Trigger: CTCTATGTGGCTGACCTGGCACGGAAGGACAAGCGT...TTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp GCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAGGTATGTGTGTGCATGACAGTAAAGGAGCAGGTTaGAGATGCCAATGGCCAACA +
Preference number: 4 (lower is better)
Translates to: AGAILCKLQGFIGMCVHDSKGAG*RCQWPT
Trigger: TGTTGGCCATTGGCATCTGCAACCTGCTCCTTTACT...GTCATGCACACACATACCTATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR GCA 90 bp TCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGAGTATCATCCCTCCTTTaGCCCTGGACATTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: SFIENGNATIAWRRSEKRVSSLL*PWTFLG
Trigger: GCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATAC...TCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp AATTCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAACCACAGCCTCCTTCTaGCGGACCACAAACAGCAAC +
Preference number: 4 (lower is better)
Translates to: NSFIENGNATIAWRRSEKTTASF*RTTNSN
Trigger: GTTGCTGTTTGTGGTCCGCCAGAAGGAGGCTGTGGT...TTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp AATTCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAGGAAGGACCCGAACATaGCGATGGAGGAGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: NSFIENGNATIAWRRSEKGRTRT*RWRRGS
Trigger: ACTTCCTCTCCTCCATCGCCATGTTCGGGTCCTTCC...TTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp AATTCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAATACCCCCATCCATCCTaGCTGACTGGAATGGGCAGT +
Preference number: 4 (lower is better)
Translates to: NSFIENGNATIAWRRSEKYPHPS*LTGMGS
Trigger: ACTGCCCATTCCAGTCAGCCAGGATGGATGGGGGTA...TTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp GCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAGGTATGTGTGTGCATGACAGGCGGTTCTCAAATTaGGCTGAGCGCATTGCTAAA +
Preference number: 4 (lower is better)
Translates to: AGAILCKLQGFIGMCVHDRRFSN*AERIAK
Trigger: TTTAGCAATGCGCTCAGCCCAATTTGAGAACCGCCT...GTCATGCACACACATACCTATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR TCA 90 bp AATTCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAACAGGGAACTCATACTTaGAGTACTGGGGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: NSFIENGNATIAWRRSEKQGTHT*STGAVL
Trigger: CAGCACAGCCCCAGTACTTCAAGTATGAGTTCCCTG...TTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp AATTCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAGGACACAGCACATCCTaGATGGAGATGACTGAGCAG +
Preference number: 4 (lower is better)
Translates to: NSFIENGNATIAWRRSEKGHSTS*MEMTEQ
Trigger: CTGCTCAGTCATCTCCATTCAGGATGTGCTGTGTCC...TTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp AATTCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGCATGGAGACGCTCTaGGAAAAGATCCAGACCCAC +
Preference number: 4 (lower is better)
Translates to: NSFIENGNATIAWRRSEKSMETL*EKIQTH
Trigger: GTGGGTCTGGATCTTTTCTCAGAGCGTCTCCATGCT...TTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp TCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGAATTGCTTGGTGCGAATaGCATTCTTGTCGGAATCGA +
Preference number: 4 (lower is better)
Translates to: SFIENGNATIAWRRSEKRIAWCE*HSCRNR
Trigger: TCGATTCCGACAAGAATGTCATTCGCACCAAGCAAT...TCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp AATTCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAACCACATAAAAGCTGTTaGTGGGGAAGTCTTTGCGCT +
Preference number: 4 (lower is better)
Translates to: NSFIENGNATIAWRRSEKPHKSC*WGSLCA
Trigger: AGCGCAAAGACTTCCCCAGCAACAGCTTTTATGTGG...TTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp TCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGACATAAAAGCTGTTGCTaGGGAAGTCTTTGCGCTGTA +
Preference number: 4 (lower is better)
Translates to: SFIENGNATIAWRRSEKRHKSCC*GSLCAV
Trigger: TACAGCGCAAAGACTTCCCCAGCAACAGCTTTTATG...TCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp AATTCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAATTGCTTGGTGCGAATaGCATTCTTGTCGGAATCGA +
Preference number: 4 (lower is better)
Translates to: NSFIENGNATIAWRRSEKIAWCE*HSCRNR
Trigger: TCGATTCCGACAAGAATGTCATTCGCACCAAGCAAT...TTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR TCA 90 bp AATTCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGGTATGTGTGTGCATaGCTAACACAGAACTTGCCT +
Preference number: 4 (lower is better)
Translates to: NSFIENGNATIAWRRSEKRYVCA*LTQNLP
Trigger: AGGCAAGTTCTGTGTTAGTCATGCACACACATACCT...TTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp AATTCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAACATAAAAGCTGTTGCTaGGGAAGTCTTTGCGCTGTA +
Preference number: 4 (lower is better)
Translates to: NSFIENGNATIAWRRSEKHKSCC*GSLCAV
Trigger: TACAGCGCAAAGACTTCCCCAGCAACAGCTTTTATG...TTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR GCA 90 bp AATTCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAACATAGAAAACGGAAATaGAACCATAGCATGGAGACG +
Preference number: 4 (lower is better)
Translates to: NSFIENGNATIAWRRSEKHRKRK*NHSMET
Trigger: CGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATG...TTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp AATTCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAACATAGAAGACAGCAATaGTGGCAATGTTCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: NSFIENGNATIAWRRSEKHRRQQ*WQCSRS
Trigger: ACTTCTGGAACATTGCCACCATTGCTGTCTTCTATG...TTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CCA 90 bp AATTCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAATGCAACCATAGCATaGAGACGCTCTGAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: NSFIENGNATIAWRRSEKNATIA*RRSEKR
Trigger: TCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATT...TTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS CCA 90 bp AAGCCCAGAGCGAACATGGCCCCGGCAGGGCGGCAGTGGCAGCGGTaGTGGCGGCGGCGGCGGCGACAGGAGACAGGACACCTCCGGGAC +
Preference number: 5 (lower is better)
Translates to: KPRANMAPAGRQWQR*WRRRRRQETGHLRD
Trigger: GTCCCGGAGGTGTCCTGTCTCCTGTCGCCGCCGCCGCCGCCACCACCGCTGCCACTGCCGCCCTGCCGGGGCCATGTTCGCTCTGGGCTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000525339.1
ENST00000532960.5
CDS GCA 90 bp GGTGGTAGCTACCCGACGCCGTGCTGGGCTGCGAGTTTTCCGAGGTaGGGGCCCTTTAAGGGCGGGCGGACGCGCCGTCCCGACGCACGA +
Preference number: 5 (lower is better)
Translates to: GGSYPTPCWAASFPR*GPFKGGRTRRPDAR
Trigger: TCGTGCGTCGGGACGGCGCGTCCGCCCGCCCTTAAAGGGCCCGCACCTCGGAAAACTCGCAGCCCAGCACGGCGTCGGGTAGCTACCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324225.9
CDS GCA 90 bp AGGAGCGAGGCCCCACCTCGCCCCGTCTGGTCTCCACCACCTCCCTaGGAGGTGCACAAGCTCCCGGCTGGTGGGACTCGGCCCTTGTGC +
Preference number: 5 (lower is better)
Translates to: RSEAPPRPVWSPPPP*EVHKLPAGGTRPLC
Trigger: GCACAAGGGCCGAGTCCCACCAGCCGGGAGCTTGTGCACCTCGCAGGGAGGTGGTGGAGACCAGACGGGGCGAGGTGGGGCCTCGCTCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528397.1
CDS GCA 90 bp CCAGGACCAGAACCGACGCCGTGCTGGGCTGCGAGTTTTCCGAGGTaGGGGCCCTTTAAGGGCGGGCGGACGCGCCGTCCCGACGCACGA +
Preference number: 5 (lower is better)
Translates to: PGPEPTPCWAASFPR*GPFKGGRTRRPDAR
Trigger: TCGTGCGTCGGGACGGCGCGTCCGCCCGCCCTTAAAGGGCCCGCACCTCGGAAAACTCGCAGCCCAGCACGGCGTCGGTTCTGGTCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532960.5
CDS GCA 90 bp GGCGGCGGCGACAGGAGACAGGACACCTCCGGGACGGGTTGCGGCTaGGGCCGCAGCTTCCAGCATCTCACCAGGACCAGAACCGACGCC +
Preference number: 5 (lower is better)
Translates to: GGGDRRQDTSGTGCG*GRSFQHLTRTRTDA
Trigger: GGCGTCGGTTCTGGTCCTGGTGAGATGCTGGAAGCTGCGGCCGCAGCCGCAACCCGTCCCGGAGGTGTCCTGTCTCCTGTCGCCGCCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532960.5
CDS GCA 90 bp AGGCCCCACCTCGCCCCGTCTGGTCTCCACCACCTCCCTGCGAGGTaGACAAGCTCCCGGCTGGTGGGACTCGGCCCTTGTGCTGTTGAC +
Preference number: 5 (lower is better)
Translates to: RPHLAPSGLHHLPAR*TSSRLVGLGPCAVD
Trigger: GTCAACAGCACAAGGGCCGAGTCCCACCAGCCGGGAGCTTGTGCACCTCGCAGGGAGGTGGTGGAGACCAGACGGGGCGAGGTGGGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528397.1
CDS CCA 90 bp CGCAGAGTGAGGGGCGTGATAGGTGGTAGCTACCCGACGCCGTGCTaGGCTGCGAGTTTTCCGAGGTGCGGGCCCTTTAAGGGCGGGCGG +
Preference number: 5 (lower is better)
Translates to: RRVRGVIGGSYPTPC*AASFPRCGPFKGGR
Trigger: CCGCCCGCCCTTAAAGGGCCCGCACCTCGGAAAACTCGCAGCCCAGCACGGCGTCGGGTAGCTACCACCTATCACGCCCCTCACTCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324225.9
CDS CCA 90 bp CGTCTGGTCTCCACCACCTCCCTGCGAGGTGCACAAGCTCCCGGCTaGTGGGACTCGGCCCTTGTGCTGTTGACCAGCCTCCCAGCCCAG +
Preference number: 5 (lower is better)
Translates to: RLVSTTSLRGAQAPG*WDSALVLLTSLPAQ
Trigger: CTGGGCTGGGAGGCTGGTCAACAGCACAAGGGCCGAGTCCCACCAGCCGGGAGCTTGTGCACCTCGCAGGGAGGTGGTGGAGACCAGACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528397.1
CDS-3UTR CAA 90 bp AGGTGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGGAGCCCCCGCAGGCTaGGTCTTCGGTCTTCACCAC +
Preference number: 5 (lower is better)
Translates to: RWDEGDPRTRVARVPRAGGAPAG*VFGLHH
Trigger: GTGGTGAAGACCGAAGACCAAGCCTGCGGGGGCTCC...CCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS GCA 90 bp CACCTGGGGTGTGGACGCCAGATCAGCCACAGAGAAGGAGGCAGCTaGTACCTTCACGTACCCACCCGGCTCGGCCGGGAGGCCCGCTTA +
Preference number: 5 (lower is better)
Translates to: HLGCGRQISHREGGS*YLHVPTRLGREARL
Trigger: TAAGCGGGCCTCCCGGCCGAGCCGGGTGGGTACGTGAAGGTAGCAGCTGCCTCCTTCTCTGTGGCTGATCTGGCGTCCACACCCCAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278951.11
CDS GCA 90 bp GGCGGCGGCGACAGGAGACAGGACACCTCCGGGACGGGTTGCGGCTaGGGCCGCAGCTTCCAGCATCTCACCAGGACCAGAACTTTAACC +
Preference number: 5 (lower is better)
Translates to: GGGDRRQDTSGTGCG*GRSFQHLTRTRTLT
Trigger: GGTTAAAGTTCTGGTCCTGGTGAGATGCTGGAAGCTGCGGCCGCAGCCGCAACCCGTCCCGGAGGTGTCCTGTCTCCTGTCGCCGCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324225.9
CDS-3UTR CAA 90 bp TGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAAGCAGGGGGATGAGCTaGATCCTCTCCCCACTCCGG +
Preference number: 5 (lower is better)
Translates to: WDEGDPRTRVARVPRAGASRGMS*ILSPLR
Trigger: CCGGAGTGGGGAGAGGATCAAGCTCATCCCCCTGCT...TGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CAA 90 bp GCCCTGAGCACAGGTCAGAGGGAAGAGAATACGCACTGCCCCAGGCCCCTTGCAAAGGAGGGCGGCTGGTaGCCGGGAGCCTGGAGACGC +
Preference number: 5 (lower is better)
Translates to: ALSTGQREENTHCPRPLAKEGGW*PGAWRR
Trigger: GCGTCTCCAGGCTCCCGGCAACCAGCCGCCCTCCTT...TGCAAGGGGCCTGGGGCAGTGCGTATTCTCTTCCCTCTGACCTGTGCTCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324225.9
CDS GCA 90 bp AGTCGCAGAGTGAGGGGCGTGATAGGTGGTAGCTACCCGACGCCGTaGTGGGCTGCGAGTTTTCCGAGGTGCGGGCCCTTTAAGGGCGGG +
Preference number: 5 (lower is better)
Translates to: SRRVRGVIGGSYPTP*WAASFPRCGPFKGG
Trigger: CCCGCCCTTAAAGGGCCCGCACCTCGGAAAACTCGCAGCCCAGCACGGCGTCGGGTAGCTACCACCTATCACGCCCCTCACTCTGCGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324225.9
CDS-3UTR CAA 90 bp TGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAGGCGCCCCCTTCTGCTaGTTCAGGACGTTCACAGAC +
Preference number: 5 (lower is better)
Translates to: WDEGDPRTRVARVPRAGAGAPFC*FRTFTD
Trigger: GTCTGTGAACGTCCTGAACAAGCAGAAGGGGGCGCC...TGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp ATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGGGGAGCCCCCGCAGGCTaGGTCTTCGGTCTTCACCAC +
Preference number: 5 (lower is better)
Translates to: IWPTSGGSRGAGLLLGRGGAPAG*VFGLHH
Trigger: GTGGTGAAGACCGAAGACCAAGCCTGCGGGGGCTCC...CCCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS TCA 90 bp GGTACTTGCGCTGAAACCTATGGCCCGAAGCAGGGAGATAGGATGTaGGCACTGTCCCAGCCGGCCTGCCCCTCCAGAGGAGCGAGGCCC +
Preference number: 5 (lower is better)
Translates to: GTCAETYGPKQGDRM*ALSQPACPSRGARP
Trigger: GGGCCTCGCTCCTCTGGAGGGGCAGGCCGGCTGGGACAGTGCTCACATCCTATCTCCCTGCTTCGGGCCATAGGTTTCAGCGCAAGTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528397.1
CDS CCA 90 bp TTCCCTGTGACATTCACCACCTGTAGCAGGAGCAGGGACAGGGAGTaGGTCTGTCGTCACGCCCAACTCAGCCCACGCCCCGCCATCCGG +
Preference number: 5 (lower is better)
Translates to: FPVTFTTCSRSRDRE*VCRHAQLSPRPAIR
Trigger: CCGGATGGCGGGGCGTGGGCTGAGTTGGGCGTGACGACAGACCCACTCCCTGTCCCTGCTCCTGCTACAGGTGGTGAATGTCACAGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526813.1
CDS-3UTR CAA 90 bp TGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAACGCCCTCTGTCCTGTaGCGGGTCACAGTATGGTTG +
Preference number: 5 (lower is better)
Translates to: WDEGDPRTRVARVPRAGATPSVL*RVTVWL
Trigger: CAACCATACTGTGACCCGCAACAGGACAGAGGGCGT...TGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp AGGTGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGTTCCGCAGAACACGCTaGTCCTTCCGTGCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: RWDEGDPRTRVARVPRAGFRRTR*SFRARS
Trigger: TGACCTGGCACGGAAGGACAAGCGTGTTCTGCGGAA...CCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp AATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGAGGGCACAGAGGTCATaGCGCAGCAGGGCCCGGTTG +
Preference number: 5 (lower is better)
Translates to: NLANIWGFQGSRPAPRQRRAQRS*RSRARL
Trigger: CAACCGGGCCCTGCTGCGCAATGACCTCTGTGCCCT...CCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp AGGTGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGACCAGTTGATGACGTaGCCCATGACCAGCAGCACC +
Preference number: 5 (lower is better)
Translates to: RWDEGDPRTRVARVPRAGDQLMT*PMTSST
Trigger: GGTGCTGCTGGTCATGGGCAACGTCATCAACTGGTC...CCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS CCA 90 bp TCGGCGTCTTTCTGCGAGACGTTCTTGGGCCCCAGAACCCCCAGATaGCTCTCGACCGAGGCCACCAAGAGCACCAAGAAGGGCAAGCCC +
Preference number: 5 (lower is better)
Translates to: SASFCETFLGPRTPR*LSTEATKSTKKGKP
Trigger: GGGCTTGCCCTTCTTGGTGCTCTTGGTGGCCTCGGTCGAGAGCCATCTGGGGGTTCTGGGGCCCAAGAACGTCTCGCAGAAAGACGCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000525339.1
ENST00000532960.5
ENST00000620360.4
ENST00000628876.2
CDS CCA 90 bp AGTGAGGGCGCTGGCAACGCAGACGATAAACTAGATTGTCCAGCCTaGAGAGAGCGGAGGCGCCAGCCCGCCAGCCAAAGGAGCCTGTGC +
Preference number: 5 (lower is better)
Translates to: SEGAGNADDKLDCPA*RERRRQPASQRSLC
Trigger: GCACAGGCTCCTTTGGCTGGCGGGCTGGCGCCTCCGCTCTCTCCAGGCTGGACAATCTAGTTTATCGTCTGCGTTGCCAGCGCCCTCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526813.1
CDS-3UTR CAA 90 bp ATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGGGGCGCCCCCTTCTGCTaGTTCAGGACGTTCACAGAC +
Preference number: 5 (lower is better)
Translates to: IWPTSGGSRGAGLLLGRGGAPFC*FRTFTD
Trigger: GTCTGTGAACGTCCTGAACAAGCAGAAGGGGGCGCC...CCCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp GGGGTGCCCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTAGGGCACAGAGGTCATaGCGCAGCAGGGCCCGGTTG +
Preference number: 5 (lower is better)
Translates to: GVPTAVEAERAELCIIPPRAQRS*RSRARL
Trigger: CAACCGGGCCCTGCTGCGCAATGACCTCTGTGCCCT...AGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGGGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp ACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCAACGCCGTGTTCCCTTaGCCAAAGACCACGCCCAGC +
Preference number: 5 (lower is better)
Translates to: TKGIQGPGWPGCPELGQFNAVFP*PKTTPS
Trigger: GCTGGGCGTGGTCTTTGGCAAAGGGAACACGGCGTT...GAATTGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp GCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAAGCAGGGGGATGAGCTaGATCCTCTCCCCACTCCGG +
Preference number: 5 (lower is better)
Translates to: AIWPTSGGSRGAGLLLGRSRGMS*ILSPLR
Trigger: CCGGAGTGGGGAGAGGATCAAGCTCATCCCCCTGCT...TCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS GCA 90 bp GCCTGGAGAGAGCGGAGGCGCCAGCCCGCCAGCCAAAGGAGCCTGTaGTCTGCTGCTATCTCAGAAGACACAAGAGCGGGCAATTACTGG +
Preference number: 5 (lower is better)
Translates to: AWRERRRQPASQRSL*SAAISEDTRAGNYW
Trigger: CCAGTAATTGCCCGCTCTTGTGTCTTCTGAGATAGCAGCAGAGCACAGGCTCCTTTGGCTGGCGGGCTGGCGCCTCCGCTCTCTCCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526813.1
CDS GCA 90 bp TACAGGTTCAAAGGAGCGGCCTGGAAAGGGCAGGGAGGGAGGGGTTaGACCGGTGGACACAAAACCCACAGTGGCCCTCGCCCATCTGAG +
Preference number: 5 (lower is better)
Translates to: YRFKGAAWKGQGGRG*TGGHKTHSGPRPSE
Trigger: CTCAGATGGGCGAGGGCCACTGTGGGTTTTGTGTCCACCGGTGCAACCCCTCCCTCCCTGCCCTTTCCAGGCCGCTCCTTTGAACCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526813.1
CDS CCA 90 bp CCACGTAGGTGCGCTCAAACTCGGCGTCTTTCTGCGAGACGTTCTTaGGCCCCAGAACCCCCAGATGGCTCTCGACCGAGGCCACCAAGA +
Preference number: 5 (lower is better)
Translates to: PRRCAQTRRLSARRS*APEPPDGSRPRPPR
Trigger: TCTTGGTGGCCTCGGTCGAGAGCCATCTGGGGGTTCTGGGGCCCAAGAACGTCTCGCAGAAAGACGCCGAGTTTGAGCGCACCTACGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000525339.1
ENST00000532960.5
ENST00000620360.4
ENST00000628876.2
CDS CCA 90 bp CCTCGCAGGATTAGGGGCACCTGGAAGGACACCACAGCCTCCTTCTaGCGGACCACAAACAGCAACGGCGCCCCCTTCTGCTTGTTCAGG +
Preference number: 5 (lower is better)
Translates to: PRRIRGTWKDTTASF*RTTNSNGAPFCLFR
Trigger: CCTGAACAAGCAGAAGGGGGCGCCGTTGCTGTTTGTGGTCCGCCAGAAGGAGGCTGTGGTGTCCTTCCAGGTGCCCCTAATCCTGCGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000528397.1
ENST00000531353.1
ENST00000532960.5
ENST00000620360.4
ENST00000628876.2
CDS-3UTR CAA 90 bp GCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGATTCTGCGAGACGTTCTaGGGCCCCAGAACCCCCAGA +
Preference number: 5 (lower is better)
Translates to: AIWPTSGGSRGAGLLLGRFCETF*GPRTPR
Trigger: TCTGGGGGTTCTGGGGCCCAAGAACGTCTCGCAGAA...TCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp CAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGGCGCCCCCTTCTGCTaGTTCAGGACGTTCACAGAC +
Preference number: 5 (lower is better)
Translates to: QFGQHLGVPGEQACSSAEGAPFC*FRTFTD
Trigger: GTCTGTGAACGTCCTGAACAAGCAGAAGGGGGCGCC...CTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp AGGTGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGCAGGGGAAGGCCTTGTaGGAGGTCACCTTGACAATT +
Preference number: 5 (lower is better)
Translates to: RWDEGDPRTRVARVPRAGQGKAL*EVTLTI
Trigger: AATTGTCAAGGTGACCTCCAACAAGGCCTTCCCCTG...CCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp ACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCGAGCAGGGGAAGGCCTaGTTGGAGGTCACCTTGACA +
Preference number: 5 (lower is better)
Translates to: TKGIQGPGWPGCPELGQFEQGKA*LEVTLT
Trigger: TGTCAAGGTGACCTCCAACAAGGCCTTCCCCTGCTC...GAATTGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp ATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGGGAGCAGGGGAAGGCCTaGTTGGAGGTCACCTTGACA +
Preference number: 5 (lower is better)
Translates to: IWPTSGGSRGAGLLLGRGEQGKA*LEVTLT
Trigger: TGTCAAGGTGACCTCCAACAAGGCCTTCCCCTGCTC...CCCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp ACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTCCGCAGAACACGCTaGTCCTTCCGTGCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: TKGIQGPGWPGCPELGQFFRRTR*SFRARS
Trigger: TGACCTGGCACGGAAGGACAAGCGTGTTCTGCGGAA...GAATTGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp ATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGGTTCCGCAGAACACGCTaGTCCTTCCGTGCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: IWPTSGGSRGAGLLLGRGFRRTR*SFRARS
Trigger: TGACCTGGCACGGAAGGACAAGCGTGTTCTGCGGAA...CCCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp GCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAAGGGCCCGGTTGTGGTaGATCTCCCGTTGCAGGATG +
Preference number: 5 (lower is better)
Translates to: AIWPTSGGSRGAGLLLGRRARLW*ISRCRM
Trigger: CATCCTGCAACGGGAGATCAACCACAACCGGGCCCT...TCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp AGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAACGCCGTGTTCCCTTaGCCAAAGACCACGCCCAGC +
Preference number: 5 (lower is better)
Translates to: SNLANIWGFQGSRPAPRQNAVFP*PKTTPS
Trigger: GCTGGGCGTGGTCTTTGGCAAAGGGAACACGGCGTT...CTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp GCCCTGAGCACAGGTCAGAGGGAAGAGAATACGCACTGCCCCAGGCCCCTTGCAGCAGCCAGCGACCAGTaGATGACGTTGCCCATGACC +
Preference number: 5 (lower is better)
Translates to: ALSTGQREENTHCPRPLAAASDQ*MTLPMT
Trigger: GGTCATGGGCAACGTCATCAACTGGTCGCTGGCTGC...TGCAAGGGGCCTGGGGCAGTGCGTATTCTCTTCCCTCTGACCTGTGCTCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp AGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGATGCAGTCCCGGTaGTGCTCCCTCGACTCTGCA +
Preference number: 5 (lower is better)
Translates to: SNLANIWGFQGSRPAPRQRMQSR*CSLDSA
Trigger: TGCAGAGTCGAGGGAGCACAACCGGGACTGCATCCT...CTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CAA 90 bp AATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGAGGATGCAGTCCCGGTaGTGCTCCCTCGACTCTGCA +
Preference number: 5 (lower is better)
Translates to: NLANIWGFQGSRPAPRQRRMQSR*CSLDSA
Trigger: TGCAGAGTCGAGGGAGCACAACCGGGACTGCATCCT...CCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CAA 90 bp AGGTGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGTGTATCATCCCTCCTTaGCCCCTGGACATTCTTGGG +
Preference number: 5 (lower is better)
Translates to: RWDEGDPRTRVARVPRAGCIIPP*PLDILG
Trigger: CCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACA...CCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS TCA 90 bp CCTTCCCAGGTTCCAGCATCTGGCAGAAGAGGCAACCGCCCACCGTaGCATTTTACCCAGACAACACCGTCCTGCACCACACCGCCCCTC +
Preference number: 5 (lower is better)
Translates to: PSQVPASGRRGNRPP*HFTQTTPSCTTPPL
Trigger: GAGGGGCGGTGTGGTGCAGGACGGTGTTGTCTGGGTAAAATGTCACGGTGGGCGGTTGCCTCTTCTGCCAGATGCTGGAACCTGGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526813.1
CDS GCA 90 bp ACAGCCTCCTTCTGGCGGACCACAAACAGCAACGGCGCCCCCTTCTaGTTGTTCAGGACGTTCACAGACACACGCACGCCCTCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: TASFWRTTNSNGAPF*LFRTFTDTRTPSVL
Trigger: CAGGACAGAGGGCGTGCGTGTGTCTGTGAACGTCCTGAACAAGCAGAAGGGGGCGCCGTTGCTGTTTGTGGTCCGCCAGAAGGAGGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000524842.5
ENST00000532960.5
ENST00000620360.4
ENST00000628876.2
CDS GCA 90 bp CAAGGGTGCCCAGCCCTGTGGGTTCTGAGAAGACACTGCCTTGGCTaGCACTGGGTTAAAGACCCAGTGGGCCTGGGGTGCAGAAAGAGC +
Preference number: 5 (lower is better)
Translates to: QGCPALWVLRRHCLG*HWVKDPVGLGCRKS
Trigger: GCTCTTTCTGCACCCCAGGCCCACTGGGTCTTTAACCCAGTGGCAGCCAAGGCAGTGTCTTCTCAGAACCCACAGGGCTGGGCACCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526813.1
CDS GCA 90 bp ACAGCCTCCTTCTGGCGGACCACAAACAGCAACGGCGCCCCCTTCTaGTTGTTCAGGACGTTCACAGACACACGCACGCCCTTTGCCTGC +
Preference number: 5 (lower is better)
Translates to: TASFWRTTNSNGAPF*LFRTFTDTRTPFAC
Trigger: GCAGGCAAAGGGCGTGCGTGTGTCTGTGAACGTCCTGAACAAGCAGAAGGGGGCGCCGTTGCTGTTTGTGGTCCGCCAGAAGGAGGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531353.1
CDS-3UTR CAA 90 bp ACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCGTGATGGCCGCCTTCTaGGTCATCGTCTGGTACATG +
Preference number: 5 (lower is better)
Translates to: TKGIQGPGWPGCPELGQFVMAAF*VIVWYM
Trigger: CATGTACCAGACGATGACCAAGAAGGCGGCCATCAC...GAATTGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp ATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGGTTTCTGGCGGTGCCCTaGATCGACCGGTTCATCTTC +
Preference number: 5 (lower is better)
Translates to: IWPTSGGSRGAGLLLGRGFLAVP*IDRFIF
Trigger: GAAGATGAACCGGTCGATCAAGGGCACCGCCAGAAA...CCCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp AGGACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTGAAGCCCCTTTAGTAGAGGGGAGGCGCCGCTaGAACTGGTCGTGCCCCTGG +
Preference number: 5 (lower is better)
Translates to: RTGHVEGNSTSLPEAPLVEGRRR*NWSCPW
Trigger: CCAGGGGCACGACCAGTTCAAGCGGCGCCTCCCCTC...TACTAAAGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000278951.11
CDS-3UTR CAA 90 bp TGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAGTGCGAATGACATTCTaGTCGGAATCGATGTCGGTC +
Preference number: 5 (lower is better)
Translates to: WDEGDPRTRVARVPRAGAVRMTF*SESMSV
Trigger: GACCGACATCGATTCCGACAAGAATGTCATTCGCAC...TGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp TGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAAGGATGTACCCCAGGTaGCTGAGGATGTTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: WDEGDPRTRVARVPRAGARMYPR*LRMLLK
Trigger: CTTCAACAACATCCTCAGCAACCTGGGGTACATCCT...TGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp TGGGACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAAAAAGCCCAAAGTGTTaGGGGATCCCACATTCCAGG +
Preference number: 5 (lower is better)
Translates to: WDEGDPRTRVARVPRAGAKSPKC*GIPHSR
Trigger: CCTGGAATGTGGGATCCCCAAACACTTTGGGCTTTT...TGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp AATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGGACCAGTTGATGACGTaGCCCATGACCAGCAGCACC +
Preference number: 5 (lower is better)
Translates to: NLANIWGFQGSRPAPRQRDQLMT*PMTSST
Trigger: GGTGCTGCTGGTCATGGGCAACGTCATCAACTGGTC...CCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CAA 90 bp GCACGACAGAGTGACCGGTCTATGACACAAAGGAGCTCAGGGCCCCTTGAGGTGGCCACCAGCTGGGGTTaGGCAAGACTAAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: ARQSDRSMTQRSSGPLEVATSWG*ARLRAW
Trigger: CCAGGCCCTTAGTCTTGCCAAACCCCAGCTGGTGGC...CACCTCAAGGGGCCCTGAGCTCCTTTGTGTCATAGACCGGTCACTCTGTCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS CCA 90 bp CCACATTCCAGGGCACAGAGGTCATTGCGCAGCAGGGCCCGGTTGTaGTTGATCTCCCGTTGCAGGATGATGAGCAGGAAAAGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: PHSRAQRSLRSRARL*LISRCRMMSRKSSP
Trigger: GGGGCTGCTTTTCCTGCTCATCATCCTGCAACGGGAGATCAACCACAACCGGGCCCTGCTGCGCAATGACCTCTGTGCCCTGGAATGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000526813.1
ENST00000529441.5
ENST00000620360.4
ENST00000628876.2
CDS CCA 90 bp ATGCACAGCTGCCGCATCTGGCCAGAGGGGAGGCGCCGCTTGAACTaGTCGTGCCCTTCAAAGGAAAGGGAAAGTTACCAGGGAACTGGG +
Preference number: 5 (lower is better)
Translates to: MHSCRIWPEGRRRLN*SCPSKERESYQGTG
Trigger: CCCAGTTCCCTGGTAACTTTCCCTTTCCTTTGAAGGGCACGACCAGTTCAAGCGGCGCCTCCCCTCTGGCCAGATGCGGCAGCTGTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526813.1
CDS CCA 90 bp AGTGGGCTCAGGAGCTGGGAGGAGACATCAGGTGCTCCTAAGTCCTaGGGGATGATGGTAGACTCTAGAAGAGGCCACCACACAGGGGCC +
Preference number: 5 (lower is better)
Translates to: SGLRSWEETSGAPKS*GMMVDSRRGHHTGA
Trigger: GGCCCCTGTGTGGTGGCCTCTTCTAGAGTCTACCATCATCCCCCAGGACTTAGGAGCACCTGATGTCTCCTCCCAGCTCCTGAGCCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526813.1
CDS CCA 90 bp AGCCCTGGTGCCCCACCACGGCCATGGTGTGAGCTGGTGGCAGGGTaGCACTTGAACTTCAGTTCCTTAGTTGTACCTGCCACACCACAC +
Preference number: 5 (lower is better)
Translates to: SPGAPPRPWCELVAG*HLNFSSLVVPATPH
Trigger: GTGTGGTGTGGCAGGTACAACTAAGGAACTGAAGTTCAAGTGCCACCCTGCCACCAGCTCACACCATGGCCGTGGTGGGGCACCAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525065.1
CDS-3UTR CAA 90 bp AGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGCTGGTATGTGGTGTaGACTGGTGACAGGGTGGAC +
Preference number: 5 (lower is better)
Translates to: SNLANIWGFQGSRPAPRQSWYVV*TGDRVD
Trigger: GTCCACCCTGTCACCAGTCAACACCACATACCAGCT...CTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp AGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGTTTCTGGCGGTGCCCTaGATCGACCGGTTCATCTTC +
Preference number: 5 (lower is better)
Translates to: SNLANIWGFQGSRPAPRQFLAVP*IDRFIF
Trigger: GAAGATGAACCGGTCGATCAAGGGCACCGCCAGAAA...CTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp ACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCGTGGTTGATCTCCCGTaGCAGGATGATGAGCAGGAA +
Preference number: 5 (lower is better)
Translates to: TKGIQGPGWPGCPELGQFVVDLP*QDDEQE
Trigger: TTCCTGCTCATCATCCTGCAACGGGAGATCAACCAC...GAATTGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp GGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCAAGGGCACAGAGGTCATaGCGCAGCAGGGCCCGGTTG +
Preference number: 5 (lower is better)
Translates to: GWPGCPELGQFFVNSKVSRAQRS*RSRARL
Trigger: CAACCGGGCCCTGCTGCGCAATGACCTCTGTGCCCT...TGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp AGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCAGGGCACAGAGGTCATaGCGCAGCAGGGCCCGGTTG +
Preference number: 5 (lower is better)
Translates to: RVARVPRAGAILCKLQGFRAQRS*RSRARL
Trigger: CAACCGGGCCCTGCTGCGCAATGACCTCTGTGCCCT...GAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp CCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCAACGCCGTGTTCCCTTaGCCAAAGACCACGCCCAGC +
Preference number: 5 (lower is better)
Translates to: PQLWRQNGLNSVSSLLCPNAVFP*PKTTPS
Trigger: GCTGGGCGTGGTCTTTGGCAAAGGGAACACGGCGTT...GGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp CCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCGCAGCCAGCGACCAGTaGATGACGTTGCCCATGACC +
Preference number: 5 (lower is better)
Translates to: PQLWRQNGLNSVSSLLCPAASDQ*MTLPMT
Trigger: GGTCATGGGCAACGTCATCAACTGGTCGCTGGCTGC...GGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp GAGGAGGACGGGCAAAATGCAAGGCATGAAATGGGGAGGGTGTCCCTTCCATCCGCCACCAGCTGGGGTTaGGCAAGACTAAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: EEDGQNARHEMGRVSLPSATSWG*ARLRAW
Trigger: CCAGGCCCTTAGTCTTGCCAAACCCCAGCTGGTGGC...GGATGGAAGGGACACCCTCCCCATTTCATGCCTTGCATTTTGCCCGTCCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CAA 90 bp ACGAAGGGGATCCAAGGACCAGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTGTATCATCCCTCCTTaGCCCCTGGACATTCTTGGG +
Preference number: 5 (lower is better)
Translates to: TKGIQGPGWPGCPELGQFCIIPP*PLDILG
Trigger: CCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACA...GAATTGCCCCAGCTCTGGGCACCCTGGCCACCCTGGTCCTTGGATCCCCTTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS TCA 90 bp TGGCAATGCACAGCTGCCGCATCTGGCCAGAGGGGAGGCGCCGCTTaGACTGGTCGTGCCCTTCAAAGGAAAGGGAAAGTTACCAGGGAA +
Preference number: 5 (lower is better)
Translates to: WQCTAAASGQRGGAA*TGRALQRKGKVTRE
Trigger: TTCCCTGGTAACTTTCCCTTTCCTTTGAAGGGCACGACCAGTTCAAGCGGCGCCTCCCCTCTGGCCAGATGCGGCAGCTGTGCATTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526813.1
CDS GCA 90 bp ATGTCGTGGTCGTCAAAGAAGTCGAGGAGGATGCAGTCCCGGTTGTaGTCCCTCGACTCTGCAGGGGTTTTCTGCCAGGTGCTGAGTCCC +
Preference number: 5 (lower is better)
Translates to: MSWSSKKSRRMQSRL*SLDSAGVFCQVLSP
Trigger: GGGACTCAGCACCTGGCAGAAAACCCCTGCAGAGTCGAGGGAGCACAACCGGGACTGCATCCTCCTCGACTTCTTTGACGACCACGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
ENST00000628876.2
CDS CCA 90 bp AGAGGTACTTGCGCTGAAACCTGGAAGGACACCACAGCCTCCTTCTaGCGGACCACAAACAGCAACGGCGCCCCCTTCTGCTTGTTCAGG +
Preference number: 5 (lower is better)
Translates to: RGTCAETWKDTTASF*RTTNSNGAPFCLFR
Trigger: CCTGAACAAGCAGAAGGGGGCGCCGTTGCTGTTTGTGGTCCGCCAGAAGGAGGCTGTGGTGTCCTTCCAGGTTTCAGCGCAAGTACCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524842.5
CDS CCA 90 bp TATGCCCAACATTTGGAAGTTGTCCTTAGCCCCCAAGGCAGCCAGTaGCTGACCGAGTCCCCAGCTGTCCACCCAACCAGGCCACTACTG +
Preference number: 5 (lower is better)
Translates to: YAQHLEVVLSPQGSQ*LTESPAVHPTRPLL
Trigger: CAGTAGTGGCCTGGTTGGGTGGACAGCTGGGGACTCGGTCAGCCACTGGCTGCCTTGGGGGCTAAGGACAACTTCCAAATGTTGGGCATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525065.1
ENST00000532062.1
CDS-3UTR CAA 90 bp GAGGAGGACGGGCAAAATGCAAGGCATGAAATGGGGAGGGTGTCCCTTCCATCCTTCTGCGAGACGTTCTaGGGCCCCAGAACCCCCAGA +
Preference number: 5 (lower is better)
Translates to: EEDGQNARHEMGRVSLPSFCETF*GPRTPR
Trigger: TCTGGGGGTTCTGGGGCCCAAGAACGTCTCGCAGAA...GGATGGAAGGGACACCCTCCCCATTTCATGCCTTGCATTTTGCCCGTCCTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp GCCCTGAGCACAGGTCAGAGGGAAGAGAATACGCACTGCCCCAGGCCCCTTGCATGTGCTGCTGTGGTATaGAAGCTGAACTGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: ALSTGQREENTHCPRPLACAAVV*KLNCSP
Trigger: TGGGGAGCAGTTCAGCTTCAATACCACAGCAGCACA...TGCAAGGGGCCTGGGGCAGTGCGTATTCTCTTCCCTCTGACCTGTGCTCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp AGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGCAGGGGAAGGCCTTGTaGGAGGTCACCTTGACAATT +
Preference number: 5 (lower is better)
Translates to: SNLANIWGFQGSRPAPRQQGKAL*EVTLTI
Trigger: AATTGTCAAGGTGACCTCCAACAAGGCCTTCCCCTG...CTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp GGGGTGCCCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTTCTGGCGGTGCCCTaGATCGACCGGTTCATCTTC +
Preference number: 5 (lower is better)
Translates to: GVPTAVEAERAELCIIPPFLAVP*IDRFIF
Trigger: GAAGATGAACCGGTCGATCAAGGGCACCGCCAGAAA...AGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGGGCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp GCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGTGGTTGATCTCCCGTaGCAGGATGATGAGCAGGAA +
Preference number: 5 (lower is better)
Translates to: AIWPTSGGSRGAGLLLGRVVDLP*QDDEQE
Trigger: TTCCTGCTCATCATCCTGCAACGGGAGATCAACCAC...TCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp ACACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGCGCAGCAGGGCCCGGTaGTGGTTGATCTCCCGTTGC +
Preference number: 5 (lower is better)
Translates to: TLRRKQQFGQHLGVPGEQRSRAR*WLISRC
Trigger: GCAACGGGAGATCAACCACAACCGGGCCCTGCTGCG...CTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp GAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTCGCAGCAGGGCCCGGTaGTGGTTGATCTCCCGTTGC +
Preference number: 5 (lower is better)
Translates to: EAERAELCIIPPLPLDILRSRAR*WLISRC
Trigger: GCAACGGGAGATCAACCACAACCGGGCCCTGCTGCG...AAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp AGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCGCAGCCAGCGACCAGTaGATGACGTTGCCCATGACC +
Preference number: 5 (lower is better)
Translates to: RRKQQFGQHLGVPGEQACAASDQ*MTLPMT
Trigger: GGTCATGGGCAACGTCATCAACTGGTCGCTGGCTGC...GCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000620360.4
CDS-3UTR CAA 90 bp GAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTGCAGCCAGCGACCAGTaGATGACGTTGCCCATGACC +
Preference number: 5 (lower is better)
Translates to: EESSNLANIWGFQGSRPAAASDQ*MTLPMT
Trigger: GGTCATGGGCAACGTCATCAACTGGTCGCTGGCTGC...AGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000620360.4
CDS-3UTR CAA 90 bp GAGGAGGACGGGCAAAATGCAAGGCATGAAATGGGGAGGGTGTCCCTTCCATCCAGGATGCAGTCCCGGTaGTGCTCCCTCGACTCTGCA +
Preference number: 5 (lower is better)
Translates to: EEDGQNARHEMGRVSLPSRMQSR*CSLDSA
Trigger: TGCAGAGTCGAGGGAGCACAACCGGGACTGCATCCT...GGATGGAAGGGACACCCTCCCCATTTCATGCCTTGCATTTTGCCCGTCCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CAA 90 bp GAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTACTGCCCCAGGCCCCTaGCAGGCCTTAGCACCAAAA +
Preference number: 5 (lower is better)
Translates to: EESSNLANIWGFQGSRPATAPGP*QALAPK
Trigger: TTTTGGTGCTAAGGCCTGCAAGGGGCCTGGGGCAGT...AGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CAA 90 bp GGGGTGCCCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTACTCACAGCGACCAGTaGATGACGTTGCCCATGACC +
Preference number: 5 (lower is better)
Translates to: GVPTAVEAERAELCIIPPTHSDQ*MTLPMT
Trigger: GGTCATGGGCAACGTCATCAACTGGTCGCTGTGAGT...AGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGGGCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532062.1
CDS-3UTR CAA 90 bp CAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGCCCAACATTTGGAAGTaGTCCTTAGCCCCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: QFGQHLGVPGEQACSSAEPNIWK*SLAPKA
Trigger: TGCCTTGGGGGCTAAGGACAACTTCCAAATGTTGGG...CTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000532062.1
CDS TCA 90 bp TCCTCTGAGGGGTGGGCAGTGGAGGCTCTCCGAGGAGACAGGCCTTaGTCACAGCAGCCCCTTTCTCTGTATACCATTCCCTTCAACCTC +
Preference number: 5 (lower is better)
Translates to: SSEGWAVEALRGDRP*SQQPLSLYTIPFNL
Trigger: GAGGTTGAAGGGAATGGTATACAGAGAAAGGGGCTGCTGTGATCAAGGCCTGTCTCCTCGGAGAGCCTCCACTGCCCACCCCTCAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531255.1
CDS GCA 90 bp CCGCTTACCAGGAAGGACCCGAACATGGCGATGGAGGAGAGGAAGTaGCAGATGTCGTGGTCGTCAAAGAAGTCGAGGAGGATGCAGTCC +
Preference number: 5 (lower is better)
Translates to: PLTRKDPNMAMEERK*QMSWSSKKSRRMQS
Trigger: GGACTGCATCCTCCTCGACTTCTTTGACGACCACGACATCTGGCACTTCCTCTCCTCCATCGCCATGTTCGGGTCCTTCCTGGTAAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278951.11
ENST00000628876.2
CDS GCA 90 bp GAGAGAGCGGAGGCGCCAGCCCGCCAGCCAAAGGAGCCTGTGCTCTaGTGCTATCTCAGAAGACACAAGAGCGGGCAATTACTGGAATTA +
Preference number: 5 (lower is better)
Translates to: ERAEAPARQPKEPVL*CYLRRHKSGQLLEL
Trigger: TAATTCCAGTAATTGCCCGCTCTTGTGTCTTCTGAGATAGCAGCAGAGCACAGGCTCCTTTGGCTGGCGGGCTGGCGCCTCCGCTCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526813.1
CDS CCA 90 bp CGATGTCGGTCAATGTGTCGTAGTCATCCTCCTCCACAGAGCTCATaGAGTCCACTCGGGGCCGAGTACCTACAGGTTCAAAGGAGCGGC +
Preference number: 5 (lower is better)
Translates to: RCRSMCRSHPPPQSS*SPLGAEYLQVQRSG
Trigger: GCCGCTCCTTTGAACCTGTAGGTACTCGGCCCCGAGTGGACTCCATGAGCTCTGTGGAGGAGGATGACTACGACACATTGACCGACATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000526813.1
ENST00000529441.5
ENST00000620360.4
ENST00000628876.2
CDS CCA 90 bp GAAGCCCCTTTAGTATCCAGGTCGTCATCCAGTGTCAGCAACACCTaGGGTGTGGACGCCAGATCAGCCACAGAGAAGGAGGCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: EAPLVSRSSSSVSNT*GVDARSATEKEAAA
Trigger: AGCAGCTGCCTCCTTCTCTGTGGCTGATCTGGCGTCCACACCCCAGGTGTTGCTGACACTGGATGACGACCTGGATACTAAAGGGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278951.11
CDS CCA 90 bp AACAATCCCAGAGGAAGAGAGAGCCCTGGTGCCCCACCACGGCCATaGTGTGAGCTGGTGGCAGGGTGGCACTTGAACTTCAGTTCCTTA +
Preference number: 5 (lower is better)
Translates to: NNPRGRESPGAPPRP*CELVAGWHLNFSSL
Trigger: TAAGGAACTGAAGTTCAAGTGCCACCCTGCCACCAGCTCACACCATGGCCGTGGTGGGGCACCAGGGCTCTCTCTTCCTCTGGGATTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525065.1
CDS-3UTR CAA 90 bp GGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATTCTGCGAGACGTTCTaGGGCCCCAGAACCCCCAGA +
Preference number: 5 (lower is better)
Translates to: GWPGCPELGQFFVNSKVSFCETF*GPRTPR
Trigger: TCTGGGGGTTCTGGGGCCCAAGAACGTCTCGCAGAA...TGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp CCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCAGCTGGTATGTGGTGTaGACTGGTGACAGGGTGGAC +
Preference number: 5 (lower is better)
Translates to: PQLWRQNGLNSVSSLLCPSWYVV*TGDRVD
Trigger: GTCCACCCTGTCACCAGTCAACACCACATACCAGCT...GGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp AATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGTTGTTGGAGGTCACCTaGACAATTACCGAGTCCACG +
Preference number: 5 (lower is better)
Translates to: NLANIWGFQGSRPAPRQRLLEVT*TITEST
Trigger: CGTGGACTCGGTAATTGTCAAGGTGACCTCCAACAA...CCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp GAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTTTGCTGGGGAAGTCTTaGCGCTGTACGGTGATGGCC +
Preference number: 5 (lower is better)
Translates to: EESSNLANIWGFQGSRPALLGKS*RCTVMA
Trigger: GGCCATCACCGTACAGCGCAAAGACTTCCCCAGCAA...AGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp GAGGAGGACGGGCAAAATGCAAGGCATGAAATGGGGAGGGTGTCCCTTCCATCCTTGCTGGGGAAGTCTTaGCGCTGTACGGTGATGGCC +
Preference number: 5 (lower is better)
Translates to: EEDGQNARHEMGRVSLPSLLGKS*RCTVMA
Trigger: GGCCATCACCGTACAGCGCAAAGACTTCCCCAGCAA...GGATGGAAGGGACACCCTCCCCATTTCATGCCTTGCATTTTGCCCGTCCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp AATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGGAGGATGTACCCCAGGTaGCTGAGGATGTTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: NLANIWGFQGSRPAPRQRRMYPR*LRMLLK
Trigger: CTTCAACAACATCCTCAGCAACCTGGGGTACATCCT...CCTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp CAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCAGGGCCCGGTTGTGGTaGATCTCCCGTTGCAGGATG +
Preference number: 5 (lower is better)
Translates to: QNGLNSVSSLLCPWTFLGRARLW*ISRCRM
Trigger: CATCCTGCAACGGGAGATCAACCACAACCGGGCCCT...GCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp GCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAAAAAGCCCAAAGTGTTaGGGGATCCCACATTCCAGG +
Preference number: 5 (lower is better)
Translates to: AIWPTSGGSRGAGLLLGRKSPKC*GIPHSR
Trigger: CCTGGAATGTGGGATCCCCAAACACTTTGGGCTTTT...TCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp GAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTGACCAGTTGATGACGTaGCCCATGACCAGCAGCACC +
Preference number: 5 (lower is better)
Translates to: EESSNLANIWGFQGSRPADQLMT*PMTSST
Trigger: GGTGCTGCTGGTCATGGGCAACGTCATCAACTGGTC...AGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CAA 90 bp AGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGGAAGAAAGCAGCAATTaGGCCAACATCTGGGGGTTC +
Preference number: 5 (lower is better)
Translates to: SNLANIWGFQGSRPAPRQEESSN*ANIWGF
Trigger: GAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTC...CTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CAA 90 bp ACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCACTGCCCCAGGCCCCTaGCAGGCCTTAGCACCAAAA +
Preference number: 5 (lower is better)
Translates to: TEKKAAIWPTSGGSRGAGTAPGP*QALAPK
Trigger: TTTTGGTGCTAAGGCCTGCAAGGGGCCTGGGGCAGT...GCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS TCA 90 bp CCCACTGACGTATGCCTCAGACGTGACTGCTTGAGACACCAGCACTaGCAGGGTTTTCTGGCGGTGCCCTTGATCGACCGGTTCATCTTC +
Preference number: 5 (lower is better)
Translates to: PTDVCLRRDCLRHQH*QGFLAVPLIDRFIF
Trigger: GAAGATGAACCGGTCGATCAAGGGCACCGCCAGAAAACCCTGTCAGTGCTGGTGTCTCAAGCAGTCACGTCTGAGGCATACGTCAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000524842.5
ENST00000620360.4
ENST00000628876.2
CDS TCA 90 bp CAGCCTTGGAGTTTCCTACAGGGGTGTCTTAGCGATCCCTGTGGGTaGCTTGGGGATAGTGAAGGACTCAGGCAGGTCCCTGCTGTAGGT +
Preference number: 5 (lower is better)
Translates to: QPWSFLQGCLSDPCG*LGDSEGLRQVPAVG
Trigger: ACCTACAGCAGGGACCTGCCTGAGTCCTTCACTATCCCCAAGTCACCCACAGGGATCGCTAAGACACCCCTGTAGGAAACTCCAAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525065.1
CDS GCA 90 bp AGCAACACCAGGAAGGACCCGAACATGGCGATGGAGGAGAGGAAGTaGCAGATGTCGTGGTCGTCAAAGAAGTCGAGGAGGATGCAGTCC +
Preference number: 5 (lower is better)
Translates to: SNTRKDPNMAMEERK*QMSWSSKKSRRMQS
Trigger: GGACTGCATCCTCCTCGACTTCTTTGACGACCACGACATCTGGCACTTCCTCTCCTCCATCGCCATGTTCGGGTCCTTCCTGGTGTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS GCA 90 bp AGAGCGGAGGCGCCAGCCCGCCAGCCAAAGGAGCCTGTGCTCTGCTaGTATCTCAGAAGACACAAGAGCGGGCAATTACTGGAATTACAT +
Preference number: 5 (lower is better)
Translates to: RAEAPARQPKEPVLC*YLRRHKSGQLLELH
Trigger: ATGTAATTCCAGTAATTGCCCGCTCTTGTGTCTTCTGAGATAGCAGCAGAGCACAGGCTCCTTTGGCTGGCGGGCTGGCGCCTCCGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526813.1
CDS CCA 90 bp CGATGTCGGTCAATGTGTCGTAGTCATCCTCCTCCACAGAGCTCATaGAGTCCACTCGGGGCCGAGTACCCTGGTAACCGTAAGAGAGGT +
Preference number: 5 (lower is better)
Translates to: RCRSMCRSHPPPQSS*SPLGAEYPGNRKRG
Trigger: ACCTCTCTTACGGTTACCAGGGTACTCGGCCCCGAGTGGACTCCATGAGCTCTGTGGAGGAGGATGACTACGACACATTGACCGACATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431081.6
CDS-3UTR CAA 90 bp GAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTTTCTGCGAGACGTTCTaGGGCCCCAGAACCCCCAGA +
Preference number: 5 (lower is better)
Translates to: EAERAELCIIPPLPLDILFCETF*GPRTPR
Trigger: TCTGGGGGTTCTGGGGCCCAAGAACGTCTCGCAGAA...AAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp GAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGCGCCCCCTTCTGCTaGTTCAGGACGTTCACAGAC +
Preference number: 5 (lower is better)
Translates to: EAERAELCIIPPLPLDILGAPFC*FRTFTD
Trigger: GTCTGTGAACGTCCTGAACAAGCAGAAGGGGGCGCC...AAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp GGGGTGCCCACAGCTGTGGAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTGGTTCGTTCCACTTTTaGGTAGAGGTACTTGCGCTG +
Preference number: 5 (lower is better)
Translates to: GVPTAVEAERAELCIIPPGSFHF*VEVLAL
Trigger: CAGCGCAAGTACCTCTACCAAAAAGTGGAACGAACC...AGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTCCACAGCTGTGGGCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp AGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCTTGCTGGGGAAGTCTTaGCGCTGTACGGTGATGGCC +
Preference number: 5 (lower is better)
Translates to: RVARVPRAGAILCKLQGFLLGKS*RCTVMA
Trigger: GGCCATCACCGTACAGCGCAAAGACTTCCCCAGCAA...GAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp CAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCTTGCTGGGGAAGTCTTaGCGCTGTACGGTGATGGCC +
Preference number: 5 (lower is better)
Translates to: QNGLNSVSSLLCPWTFLGLLGKS*RCTVMA
Trigger: GGCCATCACCGTACAGCGCAAAGACTTCCCCAGCAA...GCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp CAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCTTCCGCAGAACACGCTaGTCCTTCCGTGCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: QNGLNSVSSLLCPWTFLGFRRTR*SFRARS
Trigger: TGACCTGGCACGGAAGGACAAGCGTGTTCTGCGGAA...GCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp ATCCTTCCTCTTGCAAAGGGACAAATGGAGAGCCAAAGGACAGGGGCCCATGGAAGGGCCCGGTTGTGGTaGATCTCCCGTTGCAGGATG +
Preference number: 5 (lower is better)
Translates to: ILPLAKGQMESQRTGAHGRARLW*ISRCRM
Trigger: CATCCTGCAACGGGAGATCAACCACAACCGGGCCCT...TCCATGGGCCCCTGTCCTTTGGCTCTCCATTTGTCCCTTTGCAAGAGGAAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp GGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGATCCAGACCCACCTCACGCAGCAGGGCCCGGTaGTGGTTGATCTCCCGTTGC +
Preference number: 5 (lower is better)
Translates to: GNATIAWRRSEKRSRPTSRSRAR*WLISRC
Trigger: GCAACGGGAGATCAACCACAACCGGGCCCTGCTGCG...TGAGGTGGGTCTGGATCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp GGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCAGACCAGTTGATGACGTaGCCCATGACCAGCAGCACC +
Preference number: 5 (lower is better)
Translates to: GWPGCPELGQFFVNSKVSDQLMT*PMTSST
Trigger: GGTGCTGCTGGTCATGGGCAACGTCATCAACTGGTC...TGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CAA 90 bp GTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAAGCAGGGGGATGAGCTaGATCCTCTCCCCACTCCGG +
Preference number: 5 (lower is better)
Translates to: VARVPRAGAILCKLQGFISRGMS*ILSPLR
Trigger: CCGGAGTGGGGAGAGGATCAAGCTCATCCCCCTGCT...TATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CAA 90 bp ACACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGACTGCCCCAGGCCCCTaGCAGGCCTTAGCACCAAAA +
Preference number: 5 (lower is better)
Translates to: TLRRKQQFGQHLGVPGEQTAPGP*QALAPK
Trigger: TTTTGGTGCTAAGGCCTGCAAGGGGCCTGGGGCAGT...CTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CAA 90 bp CAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGAGTCTGAATTCAGCCTCTaGAATCAGAAGGCGGTTCTC +
Preference number: 5 (lower is better)
Translates to: QFGQHLGVPGEQACSSAESEFSL*NQKAVL
Trigger: GAGAACCGCCTTCTGATTCAAGAGGCTGAATTCAGA...CTCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CAA 90 bp GCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTCCTCGGCAGATCTTATGCCCAACATTaGGAAGTTGTCCTTAGCCCC +
Preference number: 5 (lower is better)
Translates to: AIWPTSGGSRGAGLLLGRSYAQH*EVVLSP
Trigger: GGGGCTAAGGACAACTTCCAAATGTTGGGCATAAGA...TCTGCCGAGGAGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532062.1
CDS TCA 90 bp ATCGTCCATGCGGCTGACCCGGAGCTGGTATGTGGTGTTGACTGGTaGCAGGGTGGACACATCCACGTAGAAGAACTGAATCTCCGACTC +
Preference number: 5 (lower is better)
Translates to: IVHAADPELVCGVDW*QGGHIHVEELNLRL
Trigger: GAGTCGGAGATTCAGTTCTTCTACGTGGATGTGTCCACCCTGTCACCAGTCAACACCACATACCAGCTCCGGGTCAGCCGCATGGACGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000524842.5
ENST00000528397.1
ENST00000530948.5
ENST00000531353.1
ENST00000620360.4
ENST00000628876.2
CDS-3UTR CAA 90 bp GCACGACAGAGTGACCGGTCTATGACACAAAGGAGCTCAGGGCCCCTTGAGGTGGGTTCGTTCCACTTTTaGGTAGAGGTACTTGCGCTG +
Preference number: 5 (lower is better)
Translates to: ARQSDRSMTQRSSGPLEVGSFHF*VEVLAL
Trigger: CAGCGCAAGTACCTCTACCAAAAAGTGGAACGAACC...CACCTCAAGGGGCCCTGAGCTCCTTTGTGTCATAGACCGGTCACTCTGTCGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp GAGGAGGACGGGCAAAATGCAAGGCATGAAATGGGGAGGGTGTCCCTTCCATCCCAGGGGAAGGCCTTGTaGGAGGTCACCTTGACAATT +
Preference number: 5 (lower is better)
Translates to: EEDGQNARHEMGRVSLPSQGKAL*EVTLTI
Trigger: AATTGTCAAGGTGACCTCCAACAAGGCCTTCCCCTG...GGATGGAAGGGACACCCTCCCCATTTCATGCCTTGCATTTTGCCCGTCCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp ATCCTTCCTCTTGCAAAGGGACAAATGGAGAGCCAAAGGACAGGGGCCCATGGAGAGCAGGGGAAGGCCTaGTTGGAGGTCACCTTGACA +
Preference number: 5 (lower is better)
Translates to: ILPLAKGQMESQRTGAHGEQGKA*LEVTLT
Trigger: TGTCAAGGTGACCTCCAACAAGGCCTTCCCCTGCTC...TCCATGGGCCCCTGTCCTTTGGCTCTCCATTTGTCCCTTTGCAAGAGGAAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp GAGGCTAGGACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTGAAGCCCCTGTGCGAATGACATTCTaGTCGGAATCGATGTCGGTC +
Preference number: 5 (lower is better)
Translates to: EARTGHVEGNSTSLPEAPVRMTF*SESMSV
Trigger: GACCGACATCGATTCCGACAAGAATGTCATTCGCAC...AGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTCCTAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp GAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCCTGCTTTGCTGAGGATGTTGTaGAAGGCGCTGAGATTGCCC +
Preference number: 5 (lower is better)
Translates to: EESSNLANIWGFQGSRPALLRML*KALRLP
Trigger: GGGCAATCTCAGCGCCTTCAACAACATCCTCAGCAA...AGCAGGCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp GCACGACAGAGTGACCGGTCTATGACACAAAGGAGCTCAGGGCCCCTTGAGGTGAGGATGTACCCCAGGTaGCTGAGGATGTTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: ARQSDRSMTQRSSGPLEVRMYPR*LRMLLK
Trigger: CTTCAACAACATCCTCAGCAACCTGGGGTACATCCT...CACCTCAAGGGGCCCTGAGCTCCTTTGTGTCATAGACCGGTCACTCTGTCGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp ACACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGACCAGTTGATGACGTaGCCCATGACCAGCAGCACC +
Preference number: 5 (lower is better)
Translates to: TLRRKQQFGQHLGVPGEQDQLMT*PMTSST
Trigger: GGTGCTGCTGGTCATGGGCAACGTCATCAACTGGTC...CTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CAA 90 bp ATCCTTCCTCTTGCAAAGGGACAAATGGAGAGCCAAAGGACAGGGGCCCATGGAGACCAGTTGATGACGTaGCCCATGACCAGCAGCACC +
Preference number: 5 (lower is better)
Translates to: ILPLAKGQMESQRTGAHGDQLMT*PMTSST
Trigger: GGTGCTGCTGGTCATGGGCAACGTCATCAACTGGTC...TCCATGGGCCCCTGTCCTTTGGCTCTCCATTTGTCCCTTTGCAAGAGGAAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CAA 90 bp GGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGATCCAGACCCACCTCAAGCAGGGGGATGAGCTaGATCCTCTCCCCACTCCGG +
Preference number: 5 (lower is better)
Translates to: GNATIAWRRSEKRSRPTSSRGMS*ILSPLR
Trigger: CCGGAGTGGGGAGAGGATCAAGCTCATCCCCCTGCT...TGAGGTGGGTCTGGATCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp GTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAAGGATGCAGTCCCGGTaGTGCTCCCTCGACTCTGCA +
Preference number: 5 (lower is better)
Translates to: VARVPRAGAILCKLQGFIRMQSR*CSLDSA
Trigger: TGCAGAGTCGAGGGAGCACAACCGGGACTGCATCCT...TATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CAA 90 bp GTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAACTGCCCCAGGCCCCTaGCAGGCCTTAGCACCAAAA +
Preference number: 5 (lower is better)
Translates to: VARVPRAGAILCKLQGFITAPGP*QALAPK
Trigger: TTTTGGTGCTAAGGCCTGCAAGGGGCCTGGGGCAGT...TATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CAA 90 bp ACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGCTGCCCCTGGACATTCTaGGGCAGTGTCAATGGCACT +
Preference number: 5 (lower is better)
Translates to: TEKKAAIWPTSGGSRGAGCPWTF*GSVNGT
Trigger: AGTGCCATTGACACTGCCCAAGAATGTCCAGGGGCA...GCCTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CAA 90 bp CTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCAGTGTCAATGGCACTGAGCTGGTATGTGGTGTaGACTGGTGACAGGGTGGAC +
Preference number: 5 (lower is better)
Translates to: LYHPSFAPGHSWAVSMALSWYVV*TGDRVD
Trigger: GTCCACCCTGTCACCAGTCAACACCACATACCAGCT...CAGTGCCATTGACACTGCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp AGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCTGTGCTGCTGTGGTATaGAAGCTGAACTGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: RVARVPRAGAILCKLQGFCAAVV*KLNCSP
Trigger: TGGGGAGCAGTTCAGCTTCAATACCACAGCAGCACA...GAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp ACACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGGTGATGGCCGCCTTCTaGGTCATCGTCTGGTACATG +
Preference number: 5 (lower is better)
Translates to: TLRRKQQFGQHLGVPGEQVMAAF*VIVWYM
Trigger: CATGTACCAGACGATGACCAAGAAGGCGGCCATCAC...CTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp CTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCAGTGTCAATGGCACTGGTGATGGCCGCCTTCTaGGTCATCGTCTGGTACATG +
Preference number: 5 (lower is better)
Translates to: LYHPSFAPGHSWAVSMALVMAAF*VIVWYM
Trigger: CATGTACCAGACGATGACCAAGAAGGCGGCCATCAC...CAGTGCCATTGACACTGCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp GGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGATCCAGACCCACCTCAAGGGCCCGGTTGTGGTaGATCTCCCGTTGCAGGATG +
Preference number: 5 (lower is better)
Translates to: GNATIAWRRSEKRSRPTSRARLW*ISRCRM
Trigger: CATCCTGCAACGGGAGATCAACCACAACCGGGCCCT...TGAGGTGGGTCTGGATCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp GCACGACAGAGTGACCGGTCTATGACACAAAGGAGCTCAGGGCCCCTTGAGGTGTCTGAATTCAGCCTCTaGAATCAGAAGGCGGTTCTC +
Preference number: 5 (lower is better)
Translates to: ARQSDRSMTQRSSGPLEVSEFSL*NQKAVL
Trigger: GAGAACCGCCTTCTGATTCAAGAGGCTGAATTCAGA...CACCTCAAGGGGCCCTGAGCTCCTTTGTGTCATAGACCGGTCACTCTGTCGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CAA 90 bp GAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTTGCCCCTGGACATTCTaGGGCAGTGTCAATGGCACT +
Preference number: 5 (lower is better)
Translates to: EAERAELCIIPPLPLDILCPWTF*GSVNGT
Trigger: AGTGCCATTGACACTGCCCAAGAATGTCCAGGGGCA...AAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS GCA 90 bp CTCTGTATACCATTCCCTTCAACCTCAGCAGGGCACTCAGCAGAATaGCAGAGAGGCAACCAGACTCCATGTCTCTGTACAGTCCCATGC +
Preference number: 5 (lower is better)
Translates to: LCIPFPSTSAGHSAE*QRGNQTPCLCTVPC
Trigger: GCATGGGACTGTACAGAGACATGGAGTCTGGTTGCCTCTCTGGCATTCTGCTGAGTGCCCTGCTGAGGTTGAAGGGAATGGTATACAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531255.1
CDS CCA 90 bp CATCCCACTGACGTATGCCTCAGCTTCAAGGAGGAAACAGGAAGGTaGACAGGTCAAAACCTTCCACCACCTCCCATCATGGCACCCAAA +
Preference number: 5 (lower is better)
Translates to: HPTDVCLSFKEETGR*TGQNLPPPPIMAPK
Trigger: TTTGGGTGCCATGATGGGAGGTGGTGGAAGGTTTTGACCTGTCCACCTTCCTGTTTCCTCCTTGAAGCTGAGGCATACGTCAGTGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529441.5
CDS-3UTR CAA 90 bp AGGACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTGAAGCCCCTTTAGTATGTGCTGCTGTGGTATaGAAGCTGAACTGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: RTGHVEGNSTSLPEAPLVCAAVV*KLNCSP
Trigger: TGGGGAGCAGTTCAGCTTCAATACCACAGCAGCACA...TACTAAAGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278951.11
CDS-3UTR CAA 90 bp GGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATCAGGGAACTCATACTaGAAGTACTGGGGCTGTGCT +
Preference number: 5 (lower is better)
Translates to: GWPGCPELGQFFVNSKVSSGNSY*KYWGCA
Trigger: AGCACAGCCCCAGTACTTCAAGTATGAGTTCCCTGA...TGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp AGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCTCAGGGAACTCATACTaGAAGTACTGGGGCTGTGCT +
Preference number: 5 (lower is better)
Translates to: RVARVPRAGAILCKLQGFSGNSY*KYWGCA
Trigger: AGCACAGCCCCAGTACTTCAAGTATGAGTTCCCTGA...GAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp ATCCTTCCTCTTGCAAAGGGACAAATGGAGAGCCAAAGGACAGGGGCCCATGGACAGGGGAAGGCCTTGTaGGAGGTCACCTTGACAATT +
Preference number: 5 (lower is better)
Translates to: ILPLAKGQMESQRTGAHGQGKAL*EVTLTI
Trigger: AATTGTCAAGGTGACCTCCAACAAGGCCTTCCCCTG...TCCATGGGCCCCTGTCCTTTGGCTCTCCATTTGTCCCTTTGCAAGAGGAAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp GCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAGGTATGTGTGTGCATGACGGAGCCCCCGCAGGCTaGGTCTTCGGTCTTCACCAC +
Preference number: 5 (lower is better)
Translates to: AGAILCKLQGFIGMCVHDGAPAG*VFGLHH
Trigger: GTGGTGAAGACCGAAGACCAAGCCTGCGGGGGCTCC...GTCATGCACACACATACCTATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp AGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCGTGCGAATGACATTCTaGTCGGAATCGATGTCGGTC +
Preference number: 5 (lower is better)
Translates to: RVARVPRAGAILCKLQGFVRMTF*SESMSV
Trigger: GACCGACATCGATTCCGACAAGAATGTCATTCGCAC...GAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp AGGACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTGAAGCCCCTTTAGTATTGCTGAGGATGTTGTaGAAGGCGCTGAGATTGCCC +
Preference number: 5 (lower is better)
Translates to: RTGHVEGNSTSLPEAPLVLLRML*KALRLP
Trigger: GGGCAATCTCAGCGCCTTCAACAACATCCTCAGCAA...TACTAAAGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278951.11
CDS-3UTR CAA 90 bp ACACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGTTGCTGAGGATGTTGTaGAAGGCGCTGAGATTGCCC +
Preference number: 5 (lower is better)
Translates to: TLRRKQQFGQHLGVPGEQLLRML*KALRLP
Trigger: GGGCAATCTCAGCGCCTTCAACAACATCCTCAGCAA...CTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp AGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCAGGATGTACCCCAGGTaGCTGAGGATGTTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: RVARVPRAGAILCKLQGFRMYPR*LRMLLK
Trigger: CTTCAACAACATCCTCAGCAACCTGGGGTACATCCT...GAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp GCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAGGTATGTGTGTGCATGACCGCAGCAGGGCCCGGTaGTGGTTGATCTCCCGTTGC +
Preference number: 5 (lower is better)
Translates to: AGAILCKLQGFIGMCVHDRSRAR*WLISRC
Trigger: GCAACGGGAGATCAACCACAACCGGGCCCTGCTGCG...GTCATGCACACACATACCTATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp CAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCAAAAGCCCAAAGTGTTaGGGGATCCCACATTCCAGG +
Preference number: 5 (lower is better)
Translates to: QNGLNSVSSLLCPWTFLGKSPKC*GIPHSR
Trigger: CCTGGAATGTGGGATCCCCAAACACTTTGGGCTTTT...GCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp CAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCGAAGAAAGCAGCAATTaGGCCAACATCTGGGGGTTC +
Preference number: 5 (lower is better)
Translates to: QNGLNSVSSLLCPWTFLGEESSN*ANIWGF
Trigger: GAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTC...GCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CAA 90 bp ACACTGAGAAGAAAGCAGCAATTTGGCCAACATCTGGGGGTTCCAGGGGAGCAGTGTATCATCCCTCCTTaGCCCCTGGACATTCTTGGG +
Preference number: 5 (lower is better)
Translates to: TLRRKQQFGQHLGVPGEQCIIPP*PLDILG
Trigger: CCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACA...CTGCTCCCCTGGAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTCTCAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS TCA 90 bp ACAATTACCGAGTCCACGCCTTCAGGGAACTCATACTTGAAGTACTaGGGGTGCAGGAAGGAAGGGAGAGCCCCATCTCATGAGGATGCT +
Preference number: 5 (lower is better)
Translates to: TITESTPSGNSYLKY*GCRKEGRAPSHEDA
Trigger: AGCATCCTCATGAGATGGGGCTCTCCCTTCCTTCCTGCACCCTCAGTACTTCAAGTATGAGTTCCCTGAAGGCGTGGACTCGGTAATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531255.1
CDS-3UTR CAA 90 bp AGGACTGGGCACGTAGAGGGAAACAGCACATCCCTTCCTGAAGCCCCTTTAGTATTGTTGGAGGTCACCTaGACAATTACCGAGTCCACG +
Preference number: 5 (lower is better)
Translates to: RTGHVEGNSTSLPEAPLVLLEVT*TITEST
Trigger: CGTGGACTCGGTAATTGTCAAGGTGACCTCCAACAA...TACTAAAGGGGCTTCAGGAAGGGATGTGCTGTTTCCCTCTACGTGCCCAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278951.11
CDS-3UTR CAA 90 bp CTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCAGTGTCAATGGCACTGTTGTTGGAGGTCACCTaGACAATTACCGAGTCCACG +
Preference number: 5 (lower is better)
Translates to: LYHPSFAPGHSWAVSMALLLEVT*TITEST
Trigger: CGTGGACTCGGTAATTGTCAAGGTGACCTCCAACAA...CAGTGCCATTGACACTGCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp ATCCTTCCTCTTGCAAAGGGACAAATGGAGAGCCAAAGGACAGGGGCCCATGGAAAAAGCCCAAAGTGTTaGGGGATCCCACATTCCAGG +
Preference number: 5 (lower is better)
Translates to: ILPLAKGQMESQRTGAHGKSPKC*GIPHSR
Trigger: CCTGGAATGTGGGATCCCCAAACACTTTGGGCTTTT...TCCATGGGCCCCTGTCCTTTGGCTCTCCATTTGTCCCTTTGCAAGAGGAAGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp CTGTATCATCCCTCCTTTGCCCCTGGACATTCTTGGGCAGTGTCAATGGCACTGGAAGAAAGCAGCAATTaGGCCAACATCTGGGGGTTC +
Preference number: 5 (lower is better)
Translates to: LYHPSFAPGHSWAVSMALEESSN*ANIWGF
Trigger: GAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTC...CAGTGCCATTGACACTGCCCAAGAATGTCCAGGGGCAAAGGAGGGATGATACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CAA 90 bp AGGGTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCTCTGAATTCAGCCTCTaGAATCAGAAGGCGGTTCTC +
Preference number: 5 (lower is better)
Translates to: RVARVPRAGAILCKLQGFSEFSL*NQKAVL
Trigger: GAGAACCGCCTTCTGATTCAAGAGGCTGAATTCAGA...GAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS-3UTR CAA 90 bp GGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGATCCAGACCCACCTCATGCCCCTGGACATTCTaGGGCAGTGTCAATGGCACT +
Preference number: 5 (lower is better)
Translates to: GNATIAWRRSEKRSRPTSCPWTF*GSVNGT
Trigger: AGTGCCATTGACACTGCCCAAGAATGTCCAGGGGCA...TGAGGTGGGTCTGGATCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS GCA 90 bp GAAGTAGATCTGGTACTTTTTCCGCAGAACACGCTTGTCCTTCCGTaGCAGGTCAGCCACATAGAGGTATTGCTGGGGAGAAGCTGGAAT +
Preference number: 5 (lower is better)
Translates to: EVDLVLFPQNTLVLP*QVSHIEVLLGRSWN
Trigger: ATTCCAGCTTCTCCCCAGCAATACCTCTATGTGGCTGACCTGGCACGGAAGGACAAGCGTGTTCTGCGGAAAAAGTACCAGATCTACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524988.1
ENST00000527654.1
CDS CCA 90 bp CTGCTATCTCAGAAGACACAAGAGCGGGCAATTACTGGAATTACATaGGGAAGCCATGCACATAGAATCTTTCTGGCCCCACAGCCGGCA +
Preference number: 5 (lower is better)
Translates to: LLSQKTQERAITGIT*GSHAHRIFLAPQPA
Trigger: TGCCGGCTGTGGGGCCAGAAAGATTCTATGTGCATGGCTTCCCCATGTAATTCCAGTAATTGCCCGCTCTTGTGTCTTCTGAGATAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526813.1
CDS-3UTR CAA 90 bp GTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAGGTTCGTTCCACTTTTaGGTAGAGGTACTTGCGCTG +
Preference number: 5 (lower is better)
Translates to: VARVPRAGAILCKLQGFIGSFHF*VEVLAL
Trigger: CAGCGCAAGTACCTCTACCAAAAAGTGGAACGAACC...TATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp GTGGCCAGGGTGCCCAGAGCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATATCAGGGAACTCATACTaGAAGTACTGGGGCTGTGCT +
Preference number: 5 (lower is better)
Translates to: VARVPRAGAILCKLQGFISGNSY*KYWGCA
Trigger: AGCACAGCCCCAGTACTTCAAGTATGAGTTCCCTGA...TATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGCTCTGGGCACCCTGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp TCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGAGGAGCCCCCGCAGGCTaGGTCTTCGGTCTTCACCAC +
Preference number: 5 (lower is better)
Translates to: SFIENGNATIAWRRSEKRGAPAG*VFGLHH
Trigger: GTGGTGAAGACCGAAGACCAAGCCTGCGGGGGCTCC...TCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp GGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGATCCAGACCCACCTCAGTGGTTGATCTCCCGTaGCAGGATGATGAGCAGGAA +
Preference number: 5 (lower is better)
Translates to: GNATIAWRRSEKRSRPTSVVDLP*QDDEQE
Trigger: TTCCTGCTCATCATCCTGCAACGGGAGATCAACCAC...TGAGGTGGGTCTGGATCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp GCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAGGTATGTGTGTGCATGACAACGCCGTGTTCCCTTaGCCAAAGACCACGCCCAGC +
Preference number: 5 (lower is better)
Translates to: AGAILCKLQGFIGMCVHDNAVFP*PKTTPS
Trigger: GCTGGGCGTGGTCTTTGGCAAAGGGAACACGGCGTT...GTCATGCACACACATACCTATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp GCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAGGTATGTGTGTGCATGACGCAGCCAGCGACCAGTaGATGACGTTGCCCATGACC +
Preference number: 5 (lower is better)
Translates to: AGAILCKLQGFIGMCVHDAASDQ*MTLPMT
Trigger: GGTCATGGGCAACGTCATCAACTGGTCGCTGGCTGC...GTCATGCACACACATACCTATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp GAGGCAGAACGGGCTGAACTCTGTATCATCCCTCCTTTGCCCCTGGACATTCTTTCTGAATTCAGCCTCTaGAATCAGAAGGCGGTTCTC +
Preference number: 5 (lower is better)
Translates to: EAERAELCIIPPLPLDILSEFSL*NQKAVL
Trigger: GAGAACCGCCTTCTGATTCAAGAGGCTGAATTCAGA...AAGAATGTCCAGGGGCAAAGGAGGGATGATACAGAGTTCAGCCCGTTCTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
CDS TCA 90 bp GCAGGTAAAAGGAGAGAAATATACCCAGGCAAAAGAGCATCCCACTaGCGTATGCCTCAGCTTCAAGGAGGAAACAGGAAGGTGGACAGG +
Preference number: 5 (lower is better)
Translates to: AGKRREIYPGKRASH*RMPQLQGGNRKVDR
Trigger: CCTGTCCACCTTCCTGTTTCCTCCTTGAAGCTGAGGCATACGTCAGTGGGATGCTCTTTTGCCTGGGTATATTTCTCTCCTTTTACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529441.5
CDS TCA 90 bp GGGCAAGGAAGTGCTCTTCCTGCCCTGCCTAGGCATGTTTTATTATaGTGTTGGGCTGTGTTCAGAAGCCCACAGAAGATTCTAGAAGCC +
Preference number: 5 (lower is better)
Translates to: GQGSALPALPRHVLL*CWAVFRSPQKILEA
Trigger: GGCTTCTAGAATCTTCTGTGGGCTTCTGAACACAGCCCAACATCATAATAAAACATGCCTAGGCAGGGCAGGAAGAGCACTTCCTTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532062.1
CDS-3UTR CAA 90 bp GGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGATCCAGACCCACCTCATCAGGGAACTCATACTaGAAGTACTGGGGCTGTGCT +
Preference number: 5 (lower is better)
Translates to: GNATIAWRRSEKRSRPTSSGNSY*KYWGCA
Trigger: AGCACAGCCCCAGTACTTCAAGTATGAGTTCCCTGA...TGAGGTGGGTCTGGATCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS GCA 90 bp AAACATTCTCAAAGGAGCCATAGTTGTAACCCTCATAAGGGGAACTaGCAGGAAAAGAATCAGCCAGGACTCGAGGGTGACCGCTTTCTG +
Preference number: 5 (lower is better)
Translates to: KHSQRSHSCNPHKGN*QEKNQPGLEGDRFL
Trigger: CAGAAAGCGGTCACCCTCGAGTCCTGGCTGATTCTTTTCCTGGCAGTTCCCCTTATGAGGGTTACAACTATGGCTCCTTTGAGAATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000529441.5
ENST00000620360.4
ENST00000628876.2
CDS GCA 90 bp GAAGTAGATCTGGTACTTTTTCCGCAGAACACGCTTGTCCTTCCGTaGCAGGTCAGCCACATAGAGGTATTGCTTGGTGCGAATGACATT +
Preference number: 5 (lower is better)
Translates to: EVDLVLFPQNTLVLP*QVSHIEVLLGANDI
Trigger: AATGTCATTCGCACCAAGCAATACCTCTATGTGGCTGACCTGGCACGGAAGGACAAGCGTGTTCTGCGGAAAAAGTACCAGATCTACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000526813.1
ENST00000529441.5
ENST00000620360.4
ENST00000628876.2
CDS GCA 90 bp AAACATTCTCAAAGGAGCCATAGTTGTAACCCTCATAAGGGGAACTaGCAGGAAAAGAATCAGCCAGGACTCGAGGGTGACCAAGGAGAG +
Preference number: 5 (lower is better)
Translates to: KHSQRSHSCNPHKGN*QEKNQPGLEGDQGE
Trigger: CTCTCCTTGGTCACCCTCGAGTCCTGGCTGATTCTTTTCCTGGCAGTTCCCCTTATGAGGGTTACAACTATGGCTCCTTTGAGAATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431081.6
CDS-3UTR CAA 90 bp GCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAGGTATGTGTGTGCATGACGTGATGGCCGCCTTCTaGGTCATCGTCTGGTACATG +
Preference number: 5 (lower is better)
Translates to: AGAILCKLQGFIGMCVHDVMAAF*VIVWYM
Trigger: CATGTACCAGACGATGACCAAGAAGGCGGCCATCAC...GTCATGCACACACATACCTATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS GCA 90 bp AAAGGAGAGAAATATACCCAGGCAAAAGAGCATCCCACTGACGTATaGCTCAGCTTCAAGGAGGAAACAGGAAGGTGGACAGGTCAAAAC +
Preference number: 5 (lower is better)
Translates to: KGEKYTQAKEHPTDV*LSFKEETGRWTGQN
Trigger: GTTTTGACCTGTCCACCTTCCTGTTTCCTCCTTGAAGCTGAGGCATACGTCAGTGGGATGCTCTTTTGCCTGGGTATATTTCTCTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529441.5
CDS-3UTR CAA 90 bp GCTGGGGCAATTCTTTGTAAACTCCAAGGTTTCATAGGTATGTGTGTGCATGACTTGCTGAGGATGTTGTaGAAGGCGCTGAGATTGCCC +
Preference number: 5 (lower is better)
Translates to: AGAILCKLQGFIGMCVHDLLRML*KALRLP
Trigger: GGGCAATCTCAGCGCCTTCAACAACATCCTCAGCAA...GTCATGCACACACATACCTATGAAACCTTGGAGTTTACAAAGAATTGCCCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp AATTCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGGATGCAGTCCCGGTaGTGCTCCCTCGACTCTGCA +
Preference number: 5 (lower is better)
Translates to: NSFIENGNATIAWRRSEKRMQSR*CSLDSA
Trigger: TGCAGAGTCGAGGGAGCACAACCGGGACTGCATCCT...TTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp AATTCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAGAGCAGGGGAAGGCCTaGTTGGAGGTCACCTTGACA +
Preference number: 5 (lower is better)
Translates to: NSFIENGNATIAWRRSEKEQGKA*LEVTLT
Trigger: TGTCAAGGTGACCTCCAACAAGGCCTTCCCCTGCTC...TTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp AATTCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGCTGGTATGTGGTGTaGACTGGTGACAGGGTGGAC +
Preference number: 5 (lower is better)
Translates to: NSFIENGNATIAWRRSEKSWYVV*TGDRVD
Trigger: GTCCACCCTGTCACCAGTCAACACCACATACCAGCT...TTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp AATTCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAATTTCTGGCGGTGCCCTaGATCGACCGGTTCATCTTC +
Preference number: 5 (lower is better)
Translates to: NSFIENGNATIAWRRSEKFLAVP*IDRFIF
Trigger: GAAGATGAACCGGTCGATCAAGGGCACCGCCAGAAA...TTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp TCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGAGGTTCGTTCCACTTTTaGGTAGAGGTACTTGCGCTG +
Preference number: 5 (lower is better)
Translates to: SFIENGNATIAWRRSEKRGSFHF*VEVLAL
Trigger: CAGCGCAAGTACCTCTACCAAAAAGTGGAACGAACC...TCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp TCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGATTGTTGGAGGTCACCTaGACAATTACCGAGTCCACG +
Preference number: 5 (lower is better)
Translates to: SFIENGNATIAWRRSEKRLLEVT*TITEST
Trigger: CGTGGACTCGGTAATTGTCAAGGTGACCTCCAACAA...TCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp AATTCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAGTGGTTGATCTCCCGTaGCAGGATGATGAGCAGGAA +
Preference number: 5 (lower is better)
Translates to: NSFIENGNATIAWRRSEKVVDLP*QDDEQE
Trigger: TTCCTGCTCATCATCCTGCAACGGGAGATCAACCAC...TTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS-3UTR CAA 90 bp TCATTCATAGAAAACGGAAATGCAACCATAGCATGGAGACGCTCTGAGAAAAGAGAAGAAAGCAGCAATTaGGCCAACATCTGGGGGTTC +
Preference number: 5 (lower is better)
Translates to: SFIENGNATIAWRRSEKREESSN*ANIWGF
Trigger: GAACCCCCAGATGTTGGCCAAATTGCTGCTTTCTTC...TCTTTTCTCAGAGCGTCTCCATGCTATGGTTGCATTTCCGTTTTCTATGAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324225.9
ENST00000431081.6
ENST00000620360.4
CDS GCA 72 bp TACCCGACGCCGTGCTGGGCTGCGAGTTTTCCGAGGTaGGGGCCCTTTAAGGGCGGGCGGACGCGCCGTCCC +
Preference number: 6 (lower is better)
Translates to: YPTPCWAASFPR*GPFKGGRTRRP
Trigger: GGGACGGCGCGTCCGCCCGCCCTTAAAGGGCCCGCACCTCGGAAAACTCGCAGCCCAGCACGGCGTCGGGTA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324225.9
CDS GCA 72 bp GCCCCACCTCGCCCCGTCTGGTCTCCACCACCTCCCTaGGAGGTGCACAAGCTCCCGGCTGGTGGGACTCGG +
Preference number: 6 (lower is better)
Translates to: APPRPVWSPPPP*EVHKLPAGGTR
Trigger: CCGAGTCCCACCAGCCGGGAGCTTGTGCACCTCGCAGGGAGGTGGTGGAGACCAGACGGGGCGAGGTGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528397.1
CDS GCA 72 bp GAACCGACGCCGTGCTGGGCTGCGAGTTTTCCGAGGTaGGGGCCCTTTAAGGGCGGGCGGACGCGCCGTCCC +
Preference number: 6 (lower is better)
Translates to: EPTPCWAASFPR*GPFKGGRTRRP
Trigger: GGGACGGCGCGTCCGCCCGCCCTTAAAGGGCCCGCACCTCGGAAAACTCGCAGCCCAGCACGGCGTCGGTTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532960.5
CDS GCA 72 bp CTCGCCCCGTCTGGTCTCCACCACCTCCCTGCGAGGTaGACAAGCTCCCGGCTGGTGGGACTCGGCCCTTGT +
Preference number: 6 (lower is better)
Translates to: LAPSGLHHLPAR*TSSRLVGLGPC
Trigger: ACAAGGGCCGAGTCCCACCAGCCGGGAGCTTGTGCACCTCGCAGGGAGGTGGTGGAGACCAGACGGGGCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528397.1
CDS GCA 72 bp GACAGGAGACAGGACACCTCCGGGACGGGTTGCGGCTaGGGCCGCAGCTTCCAGCATCTCACCAGGACCAGA +
Preference number: 6 (lower is better)
Translates to: DRRQDTSGTGCG*GRSFQHLTRTR
Trigger: TCTGGTCCTGGTGAGATGCTGGAAGCTGCGGCCGCAGCCGCAACCCGTCCCGGAGGTGTCCTGTCTCCTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324225.9
ENST00000532960.5
CDS CCA 72 bp AAGGAGCGGCCCATGGCAATGCACAGCTGCCGCATCTaGCCAGAGGGGAGGCGCCGCTTGAACTGGTCGTGC +
Preference number: 6 (lower is better)
Translates to: KERPMAMHSCRI*PEGRRRLNWSC
Trigger: GCACGACCAGTTCAAGCGGCGCCTCCCCTCTGGCCAGATGCGGCAGCTGTGCATTGCCATGGGCCGCTCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278951.11
ENST00000628876.2
CDS CCA 72 bp ACCACCTCCCTGCGAGGTGCACAAGCTCCCGGCTGGTaGGACTCGGCCCTTGTGCTGTTGACCAGCCTCCCA +
Preference number: 6 (lower is better)
Translates to: TTSLRGAQAPGW*DSALVLLTSLP
Trigger: TGGGAGGCTGGTCAACAGCACAAGGGCCGAGTCCCACCAGCCGGGAGCTTGTGCACCTCGCAGGGAGGTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528397.1
CDS CCA 72 bp TCCACCACCTCCCTGCGAGGTGCACAAGCTCCCGGCTaGTGGGACTCGGCCCTTGTGCTGTTGACCAGCCTC +
Preference number: 6 (lower is better)
Translates to: STTSLRGAQAPG*WDSALVLLTSL
Trigger: GAGGCTGGTCAACAGCACAAGGGCCGAGTCCCACCAGCCGGGAGCTTGTGCACCTCGCAGGGAGGTGGTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528397.1
CDS GCA 72 bp GTGAGGGGCGTGATAGGTGGTAGCTACCCGACGCCGTaGTGGGCTGCGAGTTTTCCGAGGTGCGGGCCCTTT +
Preference number: 6 (lower is better)
Translates to: VRGVIGGSYPTP*WAASFPRCGPF
Trigger: AAAGGGCCCGCACCTCGGAAAACTCGCAGCCCAGCACGGCGTCGGGTAGCTACCACCTATCACGCCCCTCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324225.9
CDS CCA 72 bp CCAGGTCTACCCATGGCAATGCACAGCTGCCGCATCTaGCCAGAGGGGAGGCGCCGCTTGAACTGGTCGTGC +
Preference number: 6 (lower is better)
Translates to: PGLPMAMHSCRI*PEGRRRLNWSC
Trigger: GCACGACCAGTTCAAGCGGCGCCTCCCCTCTGGCCAGATGCGGCAGCTGTGCATTGCCATGGGTAGACCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526813.1
CDS TCA 72 bp ACAGCTGCCGCATCTGGCCAGAGGGGAGGCGCCGCTTaGACTGGTCGTGCCCCTGGTAACCGTAAGAGAGGT +
Preference number: 6 (lower is better)
Translates to: TAAASGQRGGAA*TGRAPGNRKRG
Trigger: ACCTCTCTTACGGTTACCAGGGGCACGACCAGTTCAAGCGGCGCCTCCCCTCTGGCCAGATGCGGCAGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278951.11
ENST00000628876.2
CDS GCA 72 bp ACAGGTTCAAAGGAGCGGCCCATGGCAATGCACAGCTaGCGCATCTGGCCAGAGGGGAGGCGCCGCTTGAAC +
Preference number: 6 (lower is better)
Translates to: TGSKERPMAMHS*RIWPEGRRRLN
Trigger: GTTCAAGCGGCGCCTCCCCTCTGGCCAGATGCGGCAGCTGTGCATTGCCATGGGCCGCTCCTTTGAACCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278951.11
ENST00000628876.2
CDS GCA 72 bp CCCAGGCTGGCGTGCAATGGTGGGATCTCGGCTCACTaGAACCTCGTCCACGTAGGTGCGCTCAAACTCGGC +
Preference number: 6 (lower is better)
Translates to: PRLACNGGISAH*NLVHVGALKLG
Trigger: GCCGAGTTTGAGCGCACCTACGTGGACGAGGTTGCAGTGAGCCGAGATCCCACCATTGCACGCCAGCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525339.1
CDS CCA 72 bp AGGGGCGTGATAGGTGGTAGCTACCCGACGCCGTGCTaGGCTGCGAGTTTTCCGAGGTGCGGGCCCTTTAAG +
Preference number: 6 (lower is better)
Translates to: RGVIGGSYPTPC*AASFPRCGPFK
Trigger: CTTAAAGGGCCCGCACCTCGGAAAACTCGCAGCCCAGCACGGCGTCGGGTAGCTACCACCTATCACGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324225.9
CDS GCA 72 bp CCAGCCCTGTGGGTTCTGAGAAGACACTGCCTTGGCTaGCACTGGGTTAAAGACCCAGTGGGCCTGGGGTGC +
Preference number: 6 (lower is better)
Translates to: PALWVLRRHCLG*HWVKDPVGLGC
Trigger: GCACCCCAGGCCCACTGGGTCTTTAACCCAGTGGCAGCCAAGGCAGTGTCTTCTCAGAACCCACAGGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526813.1
CDS CCA 72 bp TGCGCTCAAACTCGGCGTCTTTCTGCGAGACGTTCTTaGGCCCCAGAACCCCCAGATGGCTCTCGACCGAGG +
Preference number: 6 (lower is better)
Translates to: CAQTRRLSARRS*APEPPDGSRPR
Trigger: CCTCGGTCGAGAGCCATCTGGGGGTTCTGGGGCCCAAGAACGTCTCGCAGAAAGACGCCGAGTTTGAGCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000525339.1
ENST00000532960.5
ENST00000620360.4
ENST00000628876.2
CDS CCA 72 bp ATTAGGGGCACCTGGAAGGACACCACAGCCTCCTTCTaGCGGACCACAAACAGCAACGGCGCCCCCTTCTGC +
Preference number: 6 (lower is better)
Translates to: IRGTWKDTTASF*RTTNSNGAPFC
Trigger: GCAGAAGGGGGCGCCGTTGCTGTTTGTGGTCCGCCAGAAGGAGGCTGTGGTGTCCTTCCAGGTGCCCCTAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000528397.1
ENST00000531353.1
ENST00000532960.5
ENST00000620360.4
ENST00000628876.2
CDS CCA 72 bp TGCGCTGAAACCTGGAAGGACACCACAGCCTCCTTCTaGCGGACCACAAACAGCAACGGCGCCCCCTTCTGC +
Preference number: 6 (lower is better)
Translates to: CAETWKDTTASF*RTTNSNGAPFC
Trigger: GCAGAAGGGGGCGCCGTTGCTGTTTGTGGTCCGCCAGAAGGAGGCTGTGGTGTCCTTCCAGGTTTCAGCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524842.5
CDS CCA 72 bp GCTGGCAACGCAGACGATAAACTAGATTGTCCAGCCTaGAGAGAGCGGAGGCGCCAGCCCGCCAGCCAAAGG +
Preference number: 6 (lower is better)
Translates to: AGNADDKLDCPA*RERRRQPASQR
Trigger: CCTTTGGCTGGCGGGCTGGCGCCTCCGCTCTCTCCAGGCTGGACAATCTAGTTTATCGTCTGCGTTGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526813.1
CDS CCA 72 bp AGAGGAAGAGAGAGCCCTGGTGCCCCACCACGGCCATaGTGTGAGCTGGTGGCAGGGTGGCACTTGAACTTC +
Preference number: 6 (lower is better)
Translates to: RGRESPGAPPRP*CELVAGWHLNF
Trigger: GAAGTTCAAGTGCCACCCTGCCACCAGCTCACACCATGGCCGTGGTGGGGCACCAGGGCTCTCTCTTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525065.1
CDS CAA 72 bp GTGCGCTCAAACTCGGCGTCTTTCTGCGAGACGTTCTaGGGCCCCAGAACCCCCAGATGGCTCTCGACCGAG +
Preference number: 6 (lower is better)
Translates to: VRSNSASFCETF*GPRTPRWLSTE
Trigger: CTCGGTCGAGAGCCATCTGGGGGTTCTGGGGCCCAAGAACGTCTCGCAGAAAGACGCCGAGTTTGAGCGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000525339.1
ENST00000532960.5
ENST00000620360.4
ENST00000628876.2
CDS CAA 90 bp GCCTCCTTCTGGCGGACCACAAACAGCAACGGCGCCCCCTTCTGCTaGTTCAGGACGTTCACAGACACACGCACGCCCTCTGTCCTGTTG +
Preference number: 6 (lower is better)
Translates to: ASFWRTTNSNGAPFC*FRTFTDTRTPSVLL
Trigger: CAACAGGACAGAGGGCGTGCGTGTGTCTGTGAACGTCCTGAACAAGCAGAAGGGGGCGCCGTTGCTGTTTGTGGTCCGCCAGAAGGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000524842.5
ENST00000532960.5
ENST00000620360.4
ENST00000628876.2
CDS CAA 90 bp GCCTCCTTCTGGCGGACCACAAACAGCAACGGCGCCCCCTTCTGCTaGTTCAGGACGTTCACAGACACACGCACGCCCTTTGCCTGCACA +
Preference number: 6 (lower is better)
Translates to: ASFWRTTNSNGAPFC*FRTFTDTRTPFACT
Trigger: TGTGCAGGCAAAGGGCGTGCGTGTGTCTGTGAACGTCCTGAACAAGCAGAAGGGGGCGCCGTTGCTGTTTGTGGTCCGCCAGAAGGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531353.1
CDS GCA 72 bp TTCTGGCGGACCACAAACAGCAACGGCGCCCCCTTCTaGTTGTTCAGGACGTTCACAGACACACGCACGCCC +
Preference number: 6 (lower is better)
Translates to: FWRTTNSNGAPF*LFRTFTDTRTP
Trigger: GGGCGTGCGTGTGTCTGTGAACGTCCTGAACAAGCAGAAGGGGGCGCCGTTGCTGTTTGTGGTCCGCCAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000524842.5
ENST00000531353.1
ENST00000532960.5
ENST00000620360.4
ENST00000628876.2
CDS GCA 72 bp GCCAGATGTCGTGGTCGTCAAAGAAGTCGAGGAGGATaGAGTCCCGGTTGTGCTCCCTCGACTCTGCAGGGG +
Preference number: 6 (lower is better)
Translates to: ARCRGRQRSRGG*SPGCAPSTLQG
Trigger: CCCCTGCAGAGTCGAGGGAGCACAACCGGGACTGCATCCTCCTCGACTTCTTTGACGACCACGACATCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
ENST00000628876.2
CDS CCA 72 bp TTCTGCGAGACGTTCTTGGGCCCCAGAACCCCCAGATaGCTCTCGACCGAGGCCACCAAGAGCACCAAGAAG +
Preference number: 6 (lower is better)
Translates to: FCETFLGPRTPR*LSTEATKSTKK
Trigger: CTTCTTGGTGCTCTTGGTGGCCTCGGTCGAGAGCCATCTGGGGGTTCTGGGGCCCAAGAACGTCTCGCAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000525339.1
ENST00000532960.5
ENST00000620360.4
ENST00000628876.2
CDS CCA 72 bp CAGGACTCGAGGGTGACCAAGGAGAGAAGCGCTTTCTaGGCAGGCTCGGTCAATGGCCACCAGCAGGGTCTT +
Preference number: 6 (lower is better)
Translates to: QDSRVTKERSAF*AGSVNGHQQGL
Trigger: AAGACCCTGCTGGTGGCCATTGACCGAGCCTGCCCAGAAAGCGCTTCTCTCCTTGGTCACCCTCGAGTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431081.6
CDS CCA 72 bp CATTTGGAAGTTGTCCTTAGCCCCCAAGGCAGCCAGTaGCTGACCGAGTCCCCAGCTGTCCACCCAACCAGG +
Preference number: 6 (lower is better)
Translates to: HLEVVLSPQGSQ*LTESPAVHPTR
Trigger: CCTGGTTGGGTGGACAGCTGGGGACTCGGTCAGCCACTGGCTGCCTTGGGGGCTAAGGACAACTTCCAAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525065.1
ENST00000532062.1
CDS CAA 72 bp TGGCGGACCACAAACAGCAACGGCGCCCCCTTCTGCTaGTTCAGGACGTTCACAGACACACGCACGCCCTCT +
Preference number: 6 (lower is better)
Translates to: WRTTNSNGAPFC*FRTFTDTRTPS
Trigger: AGAGGGCGTGCGTGTGTCTGTGAACGTCCTGAACAAGCAGAAGGGGGCGCCGTTGCTGTTTGTGGTCCGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000524842.5
ENST00000532960.5
ENST00000620360.4
ENST00000628876.2
CDS CAA 72 bp TCCAGGGCACAGAGGTCATTGCGCAGCAGGGCCCGGTaGTGGTTGATCTCCCGTTGCAGGATGATGAGCAGG +
Preference number: 6 (lower is better)
Translates to: SRAQRSLRSRAR*WLISRCRMMSR
Trigger: CCTGCTCATCATCCTGCAACGGGAGATCAACCACAACCGGGCCCTGCTGCGCAATGACCTCTGTGCCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000526813.1
ENST00000529441.5
ENST00000620360.4
ENST00000628876.2
CDS CAA 72 bp CACAGCTGCCGCATCTGGCCAGAGGGGAGGCGCCGCTaGAACTGGTCGTGCCCTTCAAAGGAAAGGGAAAGT +
Preference number: 6 (lower is better)
Translates to: HSCRIWPEGRRR*NWSCPSKERES
Trigger: ACTTTCCCTTTCCTTTGAAGGGCACGACCAGTTCAAGCGGCGCCTCCCCTCTGGCCAGATGCGGCAGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526813.1
CDS CAA 90 bp CATTCCAGGGCACAGAGGTCATTGCGCAGCAGGGCCCGGTTGTGGTaGATCTCCCGTTGCAGGATGATGAGCAGGAAAAGCAGCCCCAGC +
Preference number: 6 (lower is better)
Translates to: HSRAQRSLRSRARLW*ISRCRMMSRKSSPS
Trigger: GCTGGGGCTGCTTTTCCTGCTCATCATCCTGCAACGGGAGATCAACCACAACCGGGCCCTGCTGCGCAATGACCTCTGTGCCCTGGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000526813.1
ENST00000529441.5
ENST00000620360.4
ENST00000628876.2
CDS CAA 90 bp GGTGCCCCACCACGGCCATGGTGTGAGCTGGTGGCAGGGTGGCACTaGAACTTCAGTTCCTTAGTTGTACCTGCCACACCACACTGCCAC +
Preference number: 6 (lower is better)
Translates to: GAPPRPWCELVAGWH*NFSSLVVPATPHCH
Trigger: GTGGCAGTGTGGTGTGGCAGGTACAACTAAGGAACTGAAGTTCAAGTGCCACCCTGCCACCAGCTCACACCATGGCCGTGGTGGGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525065.1
CDS CAA 90 bp CAGGCCACTACTGCTGACCATACTCACAGCGACCAGTTGATGACGTaGCCCATGACCAGCAGCACCATGCGGTCCTGGAGGGAAGCAGGG +
Preference number: 6 (lower is better)
Translates to: QATTADHTHSDQLMT*PMTSSTMRSWREAG
Trigger: CCCTGCTTCCCTCCAGGACCGCATGGTGCTGCTGGTCATGGGCAACGTCATCAACTGGTCGCTGTGAGTATGGTCAGCAGTAGTGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525065.1
ENST00000532062.1
CDS CAA 90 bp CCACCCAACCAGGCCACTACTGCTGACCATACTCACAGCGACCAGTaGATGACGTTGCCCATGACCAGCAGCACCATGCGGTCCTGGAGG +
Preference number: 6 (lower is better)
Translates to: PPNQATTADHTHSDQ*MTLPMTSSTMRSWR
Trigger: CCTCCAGGACCGCATGGTGCTGCTGGTCATGGGCAACGTCATCAACTGGTCGCTGTGAGTATGGTCAGCAGTAGTGGCCTGGTTGGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525065.1
ENST00000532062.1
CDS TCA 72 bp ACAGCTGCCGCATCTGGCCAGAGGGGAGGCGCCGCTTaGACTGGTCGTGCCCTTCAAAGGAAAGGGAAAGTT +
Preference number: 6 (lower is better)
Translates to: TAAASGQRGGAA*TGRALQRKGKV
Trigger: AACTTTCCCTTTCCTTTGAAGGGCACGACCAGTTCAAGCGGCGCCTCCCCTCTGGCCAGATGCGGCAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526813.1
CDS TCA 72 bp GGAATAGTCCCCTATAAGCGAGGACCCAGAATCCTCTaGGGGGTGGGCAGTGGAGGCTCTCCGAGGAGACAG +
Preference number: 6 (lower is better)
Translates to: GIVPYKRGPRIL*GVGSGGSPRRQ
Trigger: CTGTCTCCTCGGAGAGCCTCCACTGCCCACCCCTCAGAGGATTCTGGGTCCTCGCTTATAGGGGACTATTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531255.1
CDS GCA 72 bp GCGCCAGCCCGCCAGCCAAAGGAGCCTGTGCTCTGCTaGTATCTCAGAAGACACAAGAGCGGGCAATTACTG +
Preference number: 6 (lower is better)
Translates to: APARQPKEPVLC*YLRRHKSGQLL
Trigger: CAGTAATTGCCCGCTCTTGTGTCTTCTGAGATAGCAGCAGAGCACAGGCTCCTTTGGCTGGCGGGCTGGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526813.1
CDS GCA 72 bp GAGGCGCCAGCCCGCCAGCCAAAGGAGCCTGTGCTCTaGTGCTATCTCAGAAGACACAAGAGCGGGCAATTA +
Preference number: 6 (lower is better)
Translates to: EAPARQPKEPVL*CYLRRHKSGQL
Trigger: TAATTGCCCGCTCTTGTGTCTTCTGAGATAGCAGCAGAGCACAGGCTCCTTTGGCTGGCGGGCTGGCGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526813.1
CDS CCA 72 bp GATCCTACTCACATCCCTCGCAGGATTAGGGGCACCTaGAAGGACACCACAGCCTCCTTCTGGCGGACCACA +
Preference number: 6 (lower is better)
Translates to: DPTHIPRRIRGT*KDTTASFWRTT
Trigger: TGTGGTCCGCCAGAAGGAGGCTGTGGTGTCCTTCCAGGTGCCCCTAATCCTGCGAGGGATGTGAGTAGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528397.1
CDS CCA 72 bp TGCCGCATCTGGCCAGAGGGGAGGCGCCGCTTGAACTaGTCGTGCCCTTCAAAGGAAAGGGAAAGTTACCAG +
Preference number: 6 (lower is better)
Translates to: CRIWPEGRRRLN*SCPSKERESYQ
Trigger: CTGGTAACTTTCCCTTTCCTTTGAAGGGCACGACCAGTTCAAGCGGCGCCTCCCCTCTGGCCAGATGCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526813.1
CDS CCA 72 bp GCCCCACCACGGCCATGGTGTGAGCTGGTGGCAGGGTaGCACTTGAACTTCAGTTCCTTAGTTGTACCTGCC +
Preference number: 6 (lower is better)
Translates to: APPRPWCELVAG*HLNFSSLVVPA
Trigger: GGCAGGTACAACTAAGGAACTGAAGTTCAAGTGCCACCCTGCCACCAGCTCACACCATGGCCGTGGTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525065.1
CDS CAA 72 bp TGTTTGGGGATCCCACATTCCAGGGCACAGAGGTCATaGCGCAGCAGGGCCCGGTTGTGGTTGATCTCCCGT +
Preference number: 6 (lower is better)
Translates to: CLGIPHSRAQRS*RSRARLWLISR
Trigger: ACGGGAGATCAACCACAACCGGGCCCTGCTGCGCAATGACCTCTGTGCCCTGGAATGTGGGATCCCCAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000526813.1
ENST00000529441.5
ENST00000620360.4
ENST00000628876.2
CDS CAA 72 bp CGCTCTGTTGCCCAGGCTAGAGCGCAGGGCGTGATCTaGGCTCATTGCAAACTCTGCCTCCCGGATTCATGC +
Preference number: 6 (lower is better)
Translates to: RSVAQARAQGVI*AHCKLCLPDSC
Trigger: GCATGAATCCGGGAGGCAGAGTTTGCAATGAGCCAAGATCACGCCCTGCGCTCTAGCCTGGGCAACAGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525065.1
CDS CAA 72 bp TGGCGGACCACAAACAGCAACGGCGCCCCCTTCTGCTaGTTCAGGACGTTCACAGACACACGCACGCCCTTT +
Preference number: 6 (lower is better)
Translates to: WRTTNSNGAPFC*FRTFTDTRTPF
Trigger: AAAGGGCGTGCGTGTGTCTGTGAACGTCCTGAACAAGCAGAAGGGGGCGCCGTTGCTGTTTGTGGTCCGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531353.1
CDS CAA 90 bp ACAGAGGTCATTGCGCAGCAGGGCCCGGTTGTGGTTGATCTCCCGTaGCAGGATGATGAGCAGGAAAAGCAGCCCCAGCAGGATGTACCC +
Preference number: 6 (lower is better)
Translates to: TEVIAQQGPVVVDLP*QDDEQEKQPQQDVP
Trigger: GGGTACATCCTGCTGGGGCTGCTTTTCCTGCTCATCATCCTGCAACGGGAGATCAACCACAACCGGGCCCTGCTGCGCAATGACCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000526813.1
ENST00000529441.5
ENST00000620360.4
ENST00000628876.2
CDS CAA 90 bp ATGGCAATGCACAGCTGCCGCATCTGGCCAGAGGGGAGGCGCCGCTaGAACTGGTCGTGCCCTTCAAAGGAAAGGGAAAGTTACCAGGGA +
Preference number: 6 (lower is better)
Translates to: MAMHSCRIWPEGRRR*NWSCPSKERESYQG
Trigger: TCCCTGGTAACTTTCCCTTTCCTTTGAAGGGCACGACCAGTTCAAGCGGCGCCTCCCCTCTGGCCAGATGCGGCAGCTGTGCATTGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526813.1
CDS CAA 90 bp ATCCCACATTCCAGGGCACAGAGGTCATTGCGCAGCAGGGCCCGGTaGTGGTTGATCTCCCGTTGCAGGATGATGAGCAGGAAAAGCAGC +
Preference number: 6 (lower is better)
Translates to: IPHSRAQRSLRSRAR*WLISRCRMMSRKSS
Trigger: GCTGCTTTTCCTGCTCATCATCCTGCAACGGGAGATCAACCACAACCGGGCCCTGCTGCGCAATGACCTCTGTGCCCTGGAATGTGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000526813.1
ENST00000529441.5
ENST00000620360.4
ENST00000628876.2
CDS CAA 90 bp CAGATGTCGTGGTCGTCAAAGAAGTCGAGGAGGATGCAGTCCCGGTaGTGCTCCCTCGACTCTGCAGGGGTTTTCTGCCAGGTGCTGAGT +
Preference number: 6 (lower is better)
Translates to: QMSWSSKKSRRMQSR*CSLDSAGVFCQVLS
Trigger: ACTCAGCACCTGGCAGAAAACCCCTGCAGAGTCGAGGGAGCACAACCGGGACTGCATCCTCCTCGACTTCTTTGACGACCACGACATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
ENST00000628876.2
CDS TCA 72 bp GTATGCCTCAGACGTGACTGCTTGAGACACCAGCACTaGCAGGGTTTTCTGGCGGTGCCCTTGATCGACCGG +
Preference number: 6 (lower is better)
Translates to: VCLRRDCLRHQH*QGFLAVPLIDR
Trigger: CCGGTCGATCAAGGGCACCGCCAGAAAACCCTGTCAGTGCTGGTGTCTCAAGCAGTCACGTCTGAGGCATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000524842.5
ENST00000620360.4
ENST00000628876.2
CDS TCA 72 bp AGTCCCCAGCTGTCCACCCAACCAGGCCACTACTGCTaGCCATACTCACAGCGACCAGTTGATGACGTTGCC +
Preference number: 6 (lower is better)
Translates to: SPQLSTQPGHYC*PYSQRPVDDVA
Trigger: GGCAACGTCATCAACTGGTCGCTGTGAGTATGGTCAGCAGTAGTGGCCTGGTTGGGTGGACAGCTGGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525065.1
ENST00000532062.1
CDS GCA 72 bp TCGTCAAAGAAGTCGAGGAGGATGCAGTCCCGGTTGTaGTCCCTCGACTCTGCAGGGGTTTTCTGCCAGGTG +
Preference number: 6 (lower is better)
Translates to: SSKKSRRMQSRL*SLDSAGVFCQV
Trigger: CACCTGGCAGAAAACCCCTGCAGAGTCGAGGGAGCACAACCGGGACTGCATCCTCCTCGACTTCTTTGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
ENST00000628876.2
CDS GCA 72 bp GCCCAGGCTAGAGCGCAGGGCGTGATCTTGGCTCATTaGAAACTCTGCCTCCCGGATTCATGCCATTCTCCT +
Preference number: 6 (lower is better)
Translates to: AQARAQGVILAH*KLCLPDSCHSP
Trigger: AGGAGAATGGCATGAATCCGGGAGGCAGAGTTTGCAATGAGCCAAGATCACGCCCTGCGCTCTAGCCTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525065.1
CDS CCA 72 bp AGGGCACAGAGGTCATTGCGCAGCAGGGCCCGGTTGTaGTTGATCTCCCGTTGCAGGATGATGAGCAGGAAA +
Preference number: 6 (lower is better)
Translates to: RAQRSLRSRARL*LISRCRMMSRK
Trigger: TTTCCTGCTCATCATCCTGCAACGGGAGATCAACCACAACCGGGCCCTGCTGCGCAATGACCTCTGTGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000526813.1
ENST00000529441.5
ENST00000620360.4
ENST00000628876.2
CDS CCA 72 bp AGGCTAGGATGTGTGCACACCCAGGCACGCCAGCCTTaGAGTTTCCTACAGGGGTGTCTTAGCGATCCCTGT +
Preference number: 6 (lower is better)
Translates to: RLGCVHTQARQP*SFLQGCLSDPC
Trigger: ACAGGGATCGCTAAGACACCCCTGTAGGAAACTCCAAGGCTGGCGTGCCTGGGTGTGCACACATCCTAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525065.1
CDS CAA 72 bp GCACAGAGGTCATTGCGCAGCAGGGCCCGGTTGTGGTaGATCTCCCGTTGCAGGATGATGAGCAGGAAAAGC +
Preference number: 6 (lower is better)
Translates to: AQRSLRSRARLW*ISRCRMMSRKS
Trigger: GCTTTTCCTGCTCATCATCCTGCAACGGGAGATCAACCACAACCGGGCCCTGCTGCGCAATGACCTCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000526813.1
ENST00000529441.5
ENST00000620360.4
ENST00000628876.2
CDS CAA 72 bp TGGTCGTCAAAGAAGTCGAGGAGGATGCAGTCCCGGTaGTGCTCCCTCGACTCTGCAGGGGTTTTCTGCCAG +
Preference number: 6 (lower is better)
Translates to: WSSKKSRRMQSR*CSLDSAGVFCQ
Trigger: CTGGCAGAAAACCCCTGCAGAGTCGAGGGAGCACAACCGGGACTGCATCCTCCTCGACTTCTTTGACGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000532062.1
ENST00000620360.4
ENST00000628876.2
CDS CAA 72 bp TCCTACAGGGGTGTCTTAGCGATCCCTGTGGGTGACTaGGGGATAGTGAAGGACTCAGGCAGGTCCCTGCTG +
Preference number: 6 (lower is better)
Translates to: SYRGVLAIPVGD*GIVKDSGRSLL
Trigger: CAGCAGGGACCTGCCTGAGTCCTTCACTATCCCCAAGTCACCCACAGGGATCGCTAAGACACCCCTGTAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525065.1
CDS CAA 72 bp CAGGCCACTACTGCTGACCATACTCACAGCGACCAGTaGATGACGTTGCCCATGACCAGCAGCACCATGCGG +
Preference number: 6 (lower is better)
Translates to: QATTADHTHSDQ*MTLPMTSSTMR
Trigger: CCGCATGGTGCTGCTGGTCATGGGCAACGTCATCAACTGGTCGCTGTGAGTATGGTCAGCAGTAGTGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525065.1
ENST00000532062.1
CDS TCA 72 bp GTTCCAGCATCTGGCAGAAGAGGCAACCGCCCACCGTaGCATTTTACCCAGACAACACCGTCCTGCACCACA +
Preference number: 6 (lower is better)
Translates to: VPASGRRGNRPP*HFTQTTPSCTT
Trigger: TGTGGTGCAGGACGGTGTTGTCTGGGTAAAATGTCACGGTGGGCGGTTGCCTCTTCTGCCAGATGCTGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526813.1
CDS GCA 72 bp AGGAAGGACCCGAACATGGCGATGGAGGAGAGGAAGTaGCAGATGTCGTGGTCGTCAAAGAAGTCGAGGAGG +
Preference number: 6 (lower is better)
Translates to: RKDPNMAMEERK*QMSWSSKKSRR
Trigger: CCTCCTCGACTTCTTTGACGACCACGACATCTGGCACTTCCTCTCCTCCATCGCCATGTTCGGGTCCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000532062.1
ENST00000620360.4
ENST00000628876.2
CDS GCA 72 bp ATCTGGCCAGAGGGGAGGCGCCGCTTGAACTGGTCGTaGCCTTCAAAGGAAAGGGAAAGTTACCAGGGAACT +
Preference number: 6 (lower is better)
Translates to: IWPEGRRRLNWS*PSKERESYQGT
Trigger: AGTTCCCTGGTAACTTTCCCTTTCCTTTGAAGGGCACGACCAGTTCAAGCGGCGCCTCCCCTCTGGCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526813.1
CDS CCA 72 bp TCAATGTGTCGTAGTCATCCTCCTCCACAGAGCTCATaGAGTCCACTCGGGGCCGAGTACCCTGGTAACCGT +
Preference number: 6 (lower is better)
Translates to: SMCRSHPPPQSS*SPLGAEYPGNR
Trigger: ACGGTTACCAGGGTACTCGGCCCCGAGTGGACTCCATGAGCTCTGTGGAGGAGGATGACTACGACACATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431081.6
CDS CCA 72 bp AGGAGCTGGGAGGAGACATCAGGTGCTCCTAAGTCCTaGGGGATGATGGTAGACTCTAGAAGAGGCCACCAC +
Preference number: 6 (lower is better)
Translates to: RSWEETSGAPKS*GMMVDSRRGHH
Trigger: GTGGTGGCCTCTTCTAGAGTCTACCATCATCCCCCAGGACTTAGGAGCACCTGATGTCTCCTCCCAGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526813.1
CDS CAA 72 bp GGGAAGTCTTTGCGCTGTACGGTGATGGCCGCCTTCTaGGTCATCGTCTGGTACATGCCGATGAAGGCTACG +
Preference number: 6 (lower is better)
Translates to: GKSLRCTVMAAF*VIVWYMPMKAT
Trigger: CGTAGCCTTCATCGGCATGTACCAGACGATGACCAAGAAGGCGGCCATCACCGTACAGCGCAAAGACTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000524842.5
ENST00000530948.5
ENST00000531255.1
ENST00000620360.4
ENST00000628876.2
CDS CAA 72 bp CCACGGCCATGGTGTGAGCTGGTGGCAGGGTGGCACTaGAACTTCAGTTCCTTAGTTGTACCTGCCACACCA +
Preference number: 6 (lower is better)
Translates to: PRPWCELVAGWH*NFSSLVVPATP
Trigger: TGGTGTGGCAGGTACAACTAAGGAACTGAAGTTCAAGTGCCACCCTGCCACCAGCTCACACCATGGCCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525065.1
CDS CAA 90 bp CAGAACACGCTTGTCCTTCCGTGCCAGGTCAGCCACATAGAGGTATaGCTGGGGAGAAGCTGGAATCAGCCCCACTTACTGCTACTTGGG +
Preference number: 6 (lower is better)
Translates to: QNTLVLPCQVSHIEV*LGRSWNQPHLLLLG
Trigger: CCCAAGTAGCAGTAAGTGGGGCTGATTCCAGCTTCTCCCCAGCAATACCTCTATGTGGCTGACCTGGCACGGAAGGACAAGCGTGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524988.1
ENST00000527654.1
CDS CAA 90 bp GAGAGGCCAAGATCTCTCTTAGCCCCCATGTCTTATGCCCAACATTaGGAAGTTGTCCTTAGCCCCCAAGGCAGCCAGTGGCTGACCGAG +
Preference number: 6 (lower is better)
Translates to: ERPRSLLAPMSYAQH*EVVLSPQGSQWLTE
Trigger: CTCGGTCAGCCACTGGCTGCCTTGGGGGCTAAGGACAACTTCCAAATGTTGGGCATAAGACATGGGGGCTAAGAGAGATCTTGGCCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525065.1
ENST00000532062.1
CDS TCA 72 bp AGTTTCCTACAGGGGTGTCTTAGCGATCCCTGTGGGTaGCTTGGGGATAGTGAAGGACTCAGGCAGGTCCCT +
Preference number: 6 (lower is better)
Translates to: SFLQGCLSDPCG*LGDSEGLRQVP
Trigger: AGGGACCTGCCTGAGTCCTTCACTATCCCCAAGTCACCCACAGGGATCGCTAAGACACCCCTGTAGGAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525065.1
CDS CCA 72 bp TTAGTATCCAGGTCGTCATCCAGTGTCAGCAACACCTaGGGTGTGGACGCCAGATCAGCCACAGAGAAGGAG +
Preference number: 6 (lower is better)
Translates to: LVSRSSSSVSNT*GVDARSATEKE
Trigger: CTCCTTCTCTGTGGCTGATCTGGCGTCCACACCCCAGGTGTTGCTGACACTGGATGACGACCTGGATACTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278951.11
CDS CAA 72 bp TGGTCGTCAAAGAAGTCGAGGAGGATGCAGTCCCGGTaGTGCTCCCTCGACTCTGCAGGGGTTTTCTTCATG +
Preference number: 6 (lower is better)
Translates to: WSSKKSRRMQSR*CSLDSAGVFFM
Trigger: CATGAAGAAAACCCCTGCAGAGTCGAGGGAGCACAACCGGGACTGCATCCTCCTCGACTTCTTTGACGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525478.5
CDS TCA 72 bp CAATTACCGAGTCCACGCCTTCAGGGAACTCATACTTaGAGTACTGAGGGTGCAGGAAGGAAGGGAGAGCCC +
Preference number: 6 (lower is better)
Translates to: QLPSPRLQGTHT*STEGAGRKGEP
Trigger: GGGCTCTCCCTTCCTTCCTGCACCCTCAGTACTTCAAGTATGAGTTCCCTGAAGGCGTGGACTCGGTAATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531255.1
CDS GCA 72 bp CTGGTACTTTTTCCGCAGAACACGCTTGTCCTTCCGTaGCAGGTCAGCCACATAGAGGTATTGCTTGGTGCG +
Preference number: 6 (lower is better)
Translates to: LVLFPQNTLVLP*QVSHIEVLLGA
Trigger: CGCACCAAGCAATACCTCTATGTGGCTGACCTGGCACGGAAGGACAAGCGTGTTCTGCGGAAAAAGTACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000526813.1
ENST00000529441.5
ENST00000620360.4
ENST00000628876.2
CDS GCA 72 bp CTGGTACTTTTTCCGCAGAACACGCTTGTCCTTCCGTaGCAGGTCAGCCACATAGAGGTATTGCTGGGGAGA +
Preference number: 6 (lower is better)
Translates to: LVLFPQNTLVLP*QVSHIEVLLGR
Trigger: TCTCCCCAGCAATACCTCTATGTGGCTGACCTGGCACGGAAGGACAAGCGTGTTCTGCGGAAAAAGTACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524988.1
ENST00000527654.1
CDS GCA 72 bp TCGTCAAAGAAGTCGAGGAGGATGCAGTCCCGGTTGTaGTCCCTCGACTCTGCAGGGGTTTTCTTCATGATG +
Preference number: 6 (lower is better)
Translates to: SSKKSRRMQSRL*SLDSAGVFFMM
Trigger: CATCATGAAGAAAACCCCTGCAGAGTCGAGGGAGCACAACCGGGACTGCATCCTCCTCGACTTCTTTGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525478.5
CDS GCA 72 bp AACTTCAGTTCCTTAGTTGTACCTGCCACACCACACTaGCACCCCACTGGCTGTCACCCAGAGTCTGACATC +
Preference number: 6 (lower is better)
Translates to: NFSSLVVPATPH*HPTGCHPESDI
Trigger: GATGTCAGACTCTGGGTGACAGCCAGTGGGGTGGCAGTGTGGTGTGGCAGGTACAACTAAGGAACTGAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525065.1
CDS CCA 72 bp TCAATGTGTCGTAGTCATCCTCCTCCACAGAGCTCATaGAGTCCACTCGGGGCCGAGTACCTACAGGTTCAA +
Preference number: 6 (lower is better)
Translates to: SMCRSHPPPQSS*SPLGAEYLQVQ
Trigger: TTGAACCTGTAGGTACTCGGCCCCGAGTGGACTCCATGAGCTCTGTGGAGGAGGATGACTACGACACATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000526813.1
ENST00000529441.5
ENST00000620360.4
ENST00000628876.2
CDS CCA 72 bp CAGGTCAGCCACATAGAGGTATTGCTGGGGAGAAGCTaGAATCAGCCCCACTTACTGCTACTTGGGAGAAGC +
Preference number: 6 (lower is better)
Translates to: QVSHIEVLLGRS*NQPHLLLLGRS
Trigger: GCTTCTCCCAAGTAGCAGTAAGTGGGGCTGATTCCAGCTTCTCCCCAGCAATACCTCTATGTGGCTGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524988.1
ENST00000527654.1
CDS CCA 72 bp GACACTGCCTTGGCTGCCACTGGGTTAAAGACCCAGTaGGCCTGGGGTGCAGAAAGAGCATTTCTCCTTTAT +
Preference number: 6 (lower is better)
Translates to: DTALAATGLKTQ*AWGAERAFLLY
Trigger: ATAAAGGAGAAATGCTCTTTCTGCACCCCAGGCCCACTGGGTCTTTAACCCAGTGGCAGCCAAGGCAGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526813.1
CDS CCA 72 bp CAGCCCCAATGTTTAAAAAGAGGACTGGCCACTTGTTaGCTCACAAGGAGCCTGAGGGTGAGTGCTCACCTG +
Preference number: 6 (lower is better)
Translates to: QPQCLKRGLATC*LTRSLRVSAHL
Trigger: CAGGTGAGCACTCACCCTCAGGCTCCTTGTGAGCCAACAAGTGGCCAGTCCTCTTTTTAAACATTGGGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529484.5
CDS CAA 72 bp ATGACTGAGCAGGGGAAGGCCTTGTTGGAGGTCACCTaGACAATTACCGAGTCCACGCCTTCAGGGAACTCA +
Preference number: 6 (lower is better)
Translates to: MTEQGKALLEVT*TITESTPSGNS
Trigger: TGAGTTCCCTGAAGGCGTGGACTCGGTAATTGTCAAGGTGACCTCCAACAAGGCCTTCCCCTGCTCAGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000524842.5
ENST00000530948.5
ENST00000531255.1
ENST00000620360.4
ENST00000628876.2
CDS CAA 90 bp CTGGCTGTCACCCAGAGTCTGACATCTCCTGAAAACAGGGACAACTaGGTCTGTGTCTTAGTCTGTGAGCACCCTGAGATCAGGGACTCC +
Preference number: 6 (lower is better)
Translates to: LAVTQSLTSPENRDN*VCVLVCEHPEIRDS
Trigger: GGAGTCCCTGATCTCAGGGTGCTCACAGACTAAGACACAGACCAAGTTGTCCCTGTTTTCAGGAGATGTCAGACTCTGGGTGACAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525065.1
ENST00000525339.1
CDS GCA 72 bp GACACAGGGTTCGTTCCACTTTTTGGTAGAGGTACTTaGGCTGAAACCTATGGCCCGAAGCAGGGAGATAGG +
Preference number: 6 (lower is better)
Translates to: DTGFVPLFGRGT*AETYGPKQGDR
Trigger: CCTATCTCCCTGCTTCGGGCCATAGGTTTCAGCGCAAGTACCTCTACCAAAAAGTGGAACGAACCCTGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528397.1
CDS CCA 72 bp GACGTATGCCTCAGCTTCAAGGAGGAAACAGGAAGGTaGACAGGTCAAAACCTTCCACCACCTCCCATCATG +
Preference number: 6 (lower is better)
Translates to: DVCLSFKEETGR*TGQNLPPPPIM
Trigger: CATGATGGGAGGTGGTGGAAGGTTTTGACCTGTCCACCTTCCTGTTTCCTCCTTGAAGCTGAGGCATACGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529441.5
CDS CAA 72 bp AGATCTCTCTTAGCCCCCATGTCTTATGCCCAACATTaGGAAGTTGTCCTTAGCCCCCAAGGCAGCCAGTGG +
Preference number: 6 (lower is better)
Translates to: RSLLAPMSYAQH*EVVLSPQGSQW
Trigger: CCACTGGCTGCCTTGGGGGCTAAGGACAACTTCCAAATGTTGGGCATAAGACATGGGGGCTAAGAGAGATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525065.1
ENST00000532062.1
CDS GCA 72 bp CAAAGGAGCCATAGTTGTAACCCTCATAAGGGGAACTaGCAGGAAAAGAATCAGCCAGGACTCGAGGGTGAC +
Preference number: 6 (lower is better)
Translates to: QRSHSCNPHKGN*QEKNQPGLEGD
Trigger: GTCACCCTCGAGTCCTGGCTGATTCTTTTCCTGGCAGTTCCCCTTATGAGGGTTACAACTATGGCTCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000529441.5
ENST00000620360.4
ENST00000628876.2
CDS GCA 72 bp AGGAAGCCCAAGGGCAAGGAAGTGCTCTTCCTGCCCTaGCTAGGCATGTTTTATTATGATGTTGGGCTGTGT +
Preference number: 6 (lower is better)
Translates to: RKPKGKEVLFLP*LGMFYYDVGLC
Trigger: ACACAGCCCAACATCATAATAAAACATGCCTAGGCAGGGCAGGAAGAGCACTTCCTTGCCCTTGGGCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532062.1
CDS CCA 72 bp AGAAGGCGAAGTAAAGGAGCAGGTTGCAGATGCCAATaGCCAACAAGTAGGAAGCGAAATCATTGGGGCGCA +
Preference number: 6 (lower is better)
Translates to: RRRSKGAGCRCQ*PTSRKRNHWGA
Trigger: TGCGCCCCAATGATTTCGCTTCCTACTTGTTGGCCATTGGCATCTGCAACCTGCTCCTTTACTTCGCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000278951.11
ENST00000324225.9
ENST00000431081.6
ENST00000525478.5
ENST00000529484.5
ENST00000532062.1
ENST00000620360.4
ENST00000628876.2
CDS CCA 72 bp GGAAGGGAAACTGATGCTTACAAAGCCCCAGGACTTTaGTTTCATAATCCGCACAAGAAACCAGGGAGGGGC +
Preference number: 6 (lower is better)
Translates to: GRETDAYKAPGL*FHNPHKKPGRG
Trigger: GCCCCTCCCTGGTTTCTTGTGCGGATTATGAAACCAAAGTCCTGGGGCTTTGTAAGCATCAGTTTCCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526813.1
CDS CAA 72 bp ACCCAGAGTCTGACATCTCCTGAAAACAGGGACAACTaGGTCTGTGTCTTAGTCTGTGAGCACCCTGAGATC +
Preference number: 6 (lower is better)
Translates to: TQSLTSPENRDN*VCVLVCEHPEI
Trigger: GATCTCAGGGTGCTCACAGACTAAGACACAGACCAAGTTGTCCCTGTTTTCAGGAGATGTCAGACTCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525065.1
ENST00000525339.1
CDS TCA 72 bp AGGAGAGAAATATACCCAGGCAAAAGAGCATCCCACTaGCGTATGCCTCAGCTTCAAGGAGGAAACAGGAAG +
Preference number: 6 (lower is better)
Translates to: RREIYPGKRASH*RMPQLQGGNRK
Trigger: CTTCCTGTTTCCTCCTTGAAGCTGAGGCATACGTCAGTGGGATGCTCTTTTGCCTGGGTATATTTCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529441.5
CDS GCA 72 bp AAATATACCCAGGCAAAAGAGCATCCCACTGACGTATaGCTCAGCTTCAAGGAGGAAACAGGAAGGTGGACA +
Preference number: 6 (lower is better)
Translates to: KYTQAKEHPTDV*LSFKEETGRWT
Trigger: TGTCCACCTTCCTGTTTCCTCCTTGAAGCTGAGGCATACGTCAGTGGGATGCTCTTTTGCCTGGGTATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529441.5
CDS CCA 72 bp CAGAAGACACAAGAGCGGGCAATTACTGGAATTACATaGGGAAGCCATGCACATAGAATCTTTCTGGCCCCA +
Preference number: 6 (lower is better)
Translates to: QKTQERAITGIT*GSHAHRIFLAP
Trigger: TGGGGCCAGAAAGATTCTATGTGCATGGCTTCCCCATGTAATTCCAGTAATTGCCCGCTCTTGTGTCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526813.1