RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SIAH3 (Homo sapiens)

Ensembl gene IDs: ENSG00000215475

Ensembl transcript IDs: ENST00000400405.4

Found 391 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCCACGCACAGACGGACCAGCCTCAGGTGTTCTTGGGCATCTGTGTaGTTGGAGGAGGGTGGCTGGTGCCCTGGCAGGGCATCTGAGAGC +
Preference number: 1 (lower is better)
Translates to: STHRRTSLRCSWASV*LEEGGWCPGRASES
Trigger: GCTCTCAGATGCCCTGCCAGGGCACCAGCCACCCTCCTCCAATCACACAGATGCCCAAGAACACCTGAGGCTGGTCCGTCTGTGCGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR TCA 90 bp GAAACCTGGGTGTGGGCAAAGGGATTCAGAAAGGGCCTGGCGCACTaGAGCCTCCATCTGCAGCCCACCCACTTCCTGGGCCCCCTGCTT +
Preference number: 1 (lower is better)
Translates to: ETWVWAKGFRKGLAH*SLHLQPTHFLGPLL
Trigger: AAGCAGGGGGCCCAGGAAGTGGGTGGGCTGCAGATGGAGGCTTCAGTGCGCCAGGCCCTTTCTGAATCCCTTTGCCCACACCCAGGTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CCA 90 bp CGCACAGACGGACCAGCCTCAGGTGTTCTTGGGCATCTGTGTGATTaGAGGAGGGTGGCTGGTGCCCTGGCAGGGCATCTGAGAGCTCAA +
Preference number: 1 (lower is better)
Translates to: RTDGPASGVLGHLCD*RRVAGALAGHLRAQ
Trigger: TTGAGCTCTCAGATGCCCTGCCAGGGCACCAGCCACCCTCCTCCAATCACACAGATGCCCAAGAACACCTGAGGCTGGTCCGTCTGTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR TCA 90 bp GGTTCCTGGGAAGCTGTCAGAGTCATGTCTGGATGGTCTGAAATGTaGTCCATCTCTGAGCTGGGCCCCTTCCCCAACCTGCCGACTGCA +
Preference number: 1 (lower is better)
Translates to: GSWEAVRVMSGWSEM*SISELGPFPNLPTA
Trigger: TGCAGTCGGCAGGTTGGGGAAGGGGCCCAGCTCAGAGATGGATCACATTTCAGACCATCCAGACATGACTCTGACAGCTTCCCAGGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR TCA 90 bp CTGACGGAATGCAGTCTCAGCCCCAGGGGCCCAGCGATTACTGTGTaGCCAGAGCAGCCTCTGTTATTAAATCTTGTATCGACTGGCACC +
Preference number: 1 (lower is better)
Translates to: LTECSLSPRGPAITV*PEQPLLLNLVSTGT
Trigger: GGTGCCAGTCGATACAAGATTTAATAACAGAGGCTGCTCTGGTCACACAGTAATCGCTGGGCCCCTGGGGCTGAGACTGCATTCCGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CCA 90 bp CCAGAAGAGTTCGTGTTTCCCCAACAATTTGCTGTTCCGCTGGCTTaGCTGTCATTTATGCCCTTGTCAGTACGGCCTTCCAGGGCCTTG +
Preference number: 1 (lower is better)
Translates to: PEEFVFPQQFAVPLA*LSFMPLSVRPSRAL
Trigger: CAAGGCCCTGGAAGGCCGTACTGACAAGGGCATAAATGACAGCCAAGCCAGCGGAACAGCAAATTGTTGGGGAAACACGAACTCTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CCA 90 bp CTTCTCCAGAAGAGTTCGTGTTTCCCCAACAATTTGCTGTTCCGCTaGCTTGGCTGTCATTTATGCCCTTGTCAGTACGGCCTTCCAGGG +
Preference number: 1 (lower is better)
Translates to: LLQKSSCFPNNLLFR*LGCHLCPCQYGLPG
Trigger: CCCTGGAAGGCCGTACTGACAAGGGCATAAATGACAGCCAAGCCAGCGGAACAGCAAATTGTTGGGGAAACACGAACTCTTCTGGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR TCA 90 bp TACTCCTTAGAGAGTGAGTCATTAACTCTTGCACCTTGGTGTGAATaGGGCAACCAGATCCCAGCGTTCTGTGCAGGGACTCCTGGGACT +
Preference number: 1 (lower is better)
Translates to: YSLESESLTLAPWCE*GNQIPAFCAGTPGT
Trigger: AGTCCCAGGAGTCCCTGCACAGAACGCTGGGATCTGGTTGCCTCATTCACACCAAGGTGCAAGAGTTAATGACTCACTCTCTAAGGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CCA 90 bp GGTGCTGAATACATACTTGAGCCGTGGTCACGTCTGCGTGCTGAATaGGACGGTAGGAGCATTTTAGAAAGTGAGGAAAGGGAAGAGAGC +
Preference number: 1 (lower is better)
Translates to: GAEYILEPWSRLRAE*DGRSILESEEREES
Trigger: GCTCTCTTCCCTTTCCTCACTTTCTAAAATGCTCCTACCGTCCCATTCAGCACGCAGACGTGACCACGGCTCAAGTATGTATTCAGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CCA 90 bp AACAGCAATAGGGAAGTGTCCGGGGAGAAAGCAGAGGGTGCTCTGTaGCAGAAAATGCTCTTGAAGCTGCTTAAGCCTCAGAGTCTCTTC +
Preference number: 1 (lower is better)
Translates to: NSNREVSGEKAEGAL*QKMLLKLLKPQSLF
Trigger: GAAGAGACTCTGAGGCTTAAGCAGCTTCAAGAGCATTTTCTGCCACAGAGCACCCTCTGCTTTCTCCCCGGACACTTCCCTATTGCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR GCA 90 bp CCTCAGAGTCTCTTCTCCAGAAGAGTTCGTGTTTCCCCAACAATTTaGTGTTCCGCTGGCTTGGCTGTCATTTATGCCCTTGTCAGTACG +
Preference number: 1 (lower is better)
Translates to: PQSLFSRRVRVSPTI*CSAGLAVIYALVST
Trigger: CGTACTGACAAGGGCATAAATGACAGCCAAGCCAGCGGAACAGCAAATTGTTGGGGAAACACGAACTCTTCTGGAGAAGAGACTCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CCA 90 bp TACTGTGTGACCAGAGCAGCCTCTGTTATTAAATCTTGTATCGACTaGCACCTCCCTTCTGGTGCGTGGGGGTGTAAGTTGGCACCAAAA +
Preference number: 1 (lower is better)
Translates to: YCVTRAASVIKSCID*HLPSGAWGCKLAPK
Trigger: TTTTGGTGCCAACTTACACCCCCACGCACCAGAAGGGAGGTGCCAGTCGATACAAGATTTAATAACAGAGGCTGCTCTGGTCACACAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CCA 90 bp TCTGTTATTAAATCTTGTATCGACTGGCACCTCCCTTCTGGTGCGTaGGGGTGTAAGTTGGCACCAAAAGTGGCTGGAGAATTAACCCAG +
Preference number: 1 (lower is better)
Translates to: SVIKSCIDWHLPSGA*GCKLAPKVAGELTQ
Trigger: CTGGGTTAATTCTCCAGCCACTTTTGGTGCCAACTTACACCCCCACGCACCAGAAGGGAGGTGCCAGTCGATACAAGATTTAATAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CCA 90 bp TCCTGGGTGCCACCCTCTGAGTTCTTTGCATTTGATGATGAGTCCTaGTTCTGCTTTTTGCATGATATGAAAGAACTGCACCCTAGGGAG +
Preference number: 1 (lower is better)
Translates to: SWVPPSEFFAFDDES*FCFLHDMKELHPRE
Trigger: CTCCCTAGGGTGCAGTTCTTTCATATCATGCAAAAAGCAGAACCAGGACTCATCATCAAATGCAAAGAACTCAGAGGGTGGCACCCAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CCA 90 bp TGTGTCATTCATACTGCAACAGGTGCTGAATACATACTTGAGCCGTaGTCACGTCTGCGTGCTGAATGGGACGGTAGGAGCATTTTAGAA +
Preference number: 1 (lower is better)
Translates to: CVIHTATGAEYILEP*SRLRAEWDGRSILE
Trigger: TTCTAAAATGCTCCTACCGTCCCATTCAGCACGCAGACGTGACCACGGCTCAAGTATGTATTCAGCACCTGTTGCAGTATGAATGACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR GCA 90 bp GTGCCACCCTCTGAGTTCTTTGCATTTGATGATGAGTCCTGGTTCTaGTTTTTGCATGATATGAAAGAACTGCACCCTAGGGAGGAACTG +
Preference number: 1 (lower is better)
Translates to: VPPSEFFAFDDESWF*FLHDMKELHPREEL
Trigger: CAGTTCCTCCCTAGGGTGCAGTTCTTTCATATCATGCAAAAAGCAGAACCAGGACTCATCATCAAATGCAAAGAACTCAGAGGGTGGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CCA 90 bp GGTACAGATTCATGCAGATACCAATTGTTAAAGACAATCTTCGTGTaGCCTGACCTCCATTTCGGCGTCAACCATGTATGTAGGCTCAGC +
Preference number: 1 (lower is better)
Translates to: GTDSCRYQLLKTIFV*PDLHFGVNHVCRLS
Trigger: GCTGAGCCTACATACATGGTTGACGCCGAAATGGAGGTCAGGCCACACGAAGATTGTCTTTAACAATTGGTATCTGCATGAATCTGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR TCA 90 bp ATTTCGGATCAGTCTTACTTCAAGAACACCAAGTTTGCAGTCAGTTaGTCTGGGTTTTGGTTGTGGTCTAACCACCTGATGTGTGACCTT +
Preference number: 1 (lower is better)
Translates to: ISDQSYFKNTKFAVS*SGFWLWSNHLMCDL
Trigger: AAGGTCACACATCAGGTGGTTAGACCACAACCAAAACCCAGATCAACTGACTGCAAACTTGGTGTTCTTGAAGTAAGACTGATCCGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR TCA 90 bp ACTAAAAGGCCTCTATGCCATTCACACTTTATGACTCGGTCCTTCTaGGCCTTGGGTCCATATGTTCATAGAAATGACATGGTTGCTGTT +
Preference number: 1 (lower is better)
Translates to: TKRPLCHSHFMTRSF*ALGPYVHRNDMVAV
Trigger: AACAGCAACCATGTCATTTCTATGAACATATGGACCCAAGGCTCAGAAGGACCGAGTCATAAAGTGTGAATGGCATAGAGGCCTTTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR TCA 90 bp ATTGGGATAGCCAATAGGCTGAGTTTGCGGAGCCCAATTTTTCCATaGAAGCCACCAAATAGAACTTTCCACACTAACAGCAATAGGGAA +
Preference number: 1 (lower is better)
Translates to: IGIANRLSLRSPIFP*KPPNRTFHTNSNRE
Trigger: TTCCCTATTGCTGTTAGTGTGGAAAGTTCTATTTGGTGGCTTTCATGGAAAAATTGGGCTCCGCAAACTCAGCCTATTGGCTATCCCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR TCA 90 bp GGATCACTTATTCATAATACAGTCTTGTGTGCAGTGAAAATAACCTaGAGTCATTCCCAGTGTGGCTCAGGTAACTTGGCACAACCAGAA +
Preference number: 1 (lower is better)
Translates to: GSLIHNTVLCAVKIT*SHSQCGSGNLAQPE
Trigger: TTCTGGTTGTGCCAAGTTACCTGAGCCACACTGGGAATGACTTCAGGTTATTTTCACTGCACACAAGACTGTATTATGAATAAGTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR TCA 90 bp TTGAGTATGAAAGCACTAAAAGGCCTCTATGCCATTCACACTTTATaGCTCGGTCCTTCTGAGCCTTGGGTCCATATGTTCATAGAAATG +
Preference number: 1 (lower is better)
Translates to: LSMKALKGLYAIHTL*LGPSEPWVHMFIEM
Trigger: CATTTCTATGAACATATGGACCCAAGGCTCAGAAGGACCGAGTCATAAAGTGTGAATGGCATAGAGGCCTTTTAGTGCTTTCATACTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR TCA 90 bp CAAATACACGAGAGACTTCTACAAGAAGATGTTGATGAATTGTTCTaGCAACCAAATAAGAGAAAGCAGCCTGCGCAGAGGAAATATGGA +
Preference number: 1 (lower is better)
Translates to: QIHERLLQEDVDELF*QPNKRKQPAQRKYG
Trigger: TCCATATTTCCTCTGCGCAGGCTGCTTTCTCTTATTTGGTTGTCAGAACAATTCATCAACATCTTCTTGTAGAAGTCTCTCGTGTATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CCA 90 bp TCTTCACATATGGATATGGAGAGGCCTTTTGGGGAGCACCATAGATaGAAGATAATAATACATTTCCCATGCTTTGTCCTAAAGCTTTCT +
Preference number: 1 (lower is better)
Translates to: SSHMDMERPFGEHHR*KIIIHFPCFVLKLS
Trigger: AGAAAGCTTTAGGACAAAGCATGGGAAATGTATTATTATCTTCCATCTATGGTGCTCCCCAAAAGGCCTCTCCATATCCATATGTGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CCA 90 bp ACAAGTAACAGGAAATTTGAGCTTTATAGAGCTGGTTTTGCTTTTTaGATTGGGATAGCCAATAGGCTGAGTTTGCGGAGCCCAATTTTT +
Preference number: 1 (lower is better)
Translates to: TSNRKFELYRAGFAF*IGIANRLSLRSPIF
Trigger: AAAAATTGGGCTCCGCAAACTCAGCCTATTGGCTATCCCAATCCAAAAAGCAAAACCAGCTCTATAAAGCTCAAATTTCCTGTTACTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CCA 90 bp AAGCTCAAATACAAACTGCTGGTACCATTTCCTATTCCCAATTCTTaGTTGTTAGTTTGCTCCTTCTTCTCCAGTTCTTCACATATGGAT +
Preference number: 1 (lower is better)
Translates to: KLKYKLLVPFPIPNS*LLVCSFFSSSSHMD
Trigger: ATCCATATGTGAAGAACTGGAGAAGAAGGAGCAAACTAACAACCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 90 bp TGCAGATGGCCAGCCAGGGCAACCTGCCTGAGACTAAGTAGTCACTaGGATGCCTGCCAGGACCAAGCCGAGGGGGTGAGGTGCAGGAAC +
Preference number: 2 (lower is better)
Translates to: CRWPARATCLRLSSH*DACQDQAEGVRCRN
Trigger: GTTCCTGCACCTCACCCCCTCGGCTTGGTCCTGGCAGGCATCCAAGTGACTACTTAGTCTCAGGCAGGTTGCCCTGGCTGGCCATCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 90 bp GACAGCCAGTCTTTCCACGCACAGACGGACCAGCCTCAGGTGTTCTaGGGCATCTGTGTGATTGGAGGAGGGTGGCTGGTGCCCTGGCAG +
Preference number: 2 (lower is better)
Translates to: DSQSFHAQTDQPQVF*GICVIGGGWLVPWQ
Trigger: CTGCCAGGGCACCAGCCACCCTCCTCCAATCACACAGATGCCCAAGAACACCTGAGGCTGGTCCGTCTGTGCGTGGAAAGACTGGCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CCA 90 bp TGCTGTTGGTCAGAAGCCATACGTACCCGGTCCCAGGCCCAGCTCTGCCATTTGTTGGAGGAGGGTGGCTaGTGCCCTGGCAGGGCATCT +
Preference number: 2 (lower is better)
Translates to: CCWSEAIRTRSQAQLCHLLEEGG*CPGRAS
Trigger: AGATGCCCTGCCAGGGCACCAGCCACCCTCCTCCAA...CAAATGGCAGAGCTGGGCCTGGGACCGGGTACGTATGGCTTCTGACCAACAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR GCA 90 bp CACTTGGATGCCTGCCAGGACCAAGCCGAGGGGGTGAGGTGCAGGAACAGGGCAGTCAGAGATCCTGGGTaGCACCCTCTGAGTTCTTTG +
Preference number: 2 (lower is better)
Translates to: HLDACQDQAEGVRCRNRAVRDPG*HPLSSL
Trigger: CAAAGAACTCAGAGGGTGGCACCCAGGATCTCTGAC...TGCCCTGTTCCTGCACCTCACCCCCTCGGCTTGGTCCTGGCAGGCATCCAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CCA 90 bp TGCTGTTGGTCAGAAGCCATACGTACCCGGTCCCAGGCCCAGCTCTGCCATTTGGTGACCTCAACCTCCTaGGCTCAAGCCATCCCCCTG +
Preference number: 2 (lower is better)
Translates to: CCWSEAIRTRSQAQLCHLVTSTS*AQAIPL
Trigger: CAGGGGGATGGCTTGAGCCCAGGAGGTTGAGGTCAC...CAAATGGCAGAGCTGGGCCTGGGACCGGGTACGTATGGCTTCTGACCAACAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CCA 90 bp GTCCGGGGAGAAAGCAGAGGGTGCTCTGTGGCAGAAAATGCTCTTGAAGCTGCTAGCCCACCCACTTCCTaGGCCCCCTGCTTCCAGGTG +
Preference number: 2 (lower is better)
Translates to: VRGESRGCSVAENALEAASPPTS*APCFQV
Trigger: CACCTGGAAGCAGGGGGCCCAGGAAGTGGGTGGGCT...AGCAGCTTCAAGAGCATTTTCTGCCACAGAGCACCCTCTGCTTTCTCCCCGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR GCA 90 bp TGCTGTTGGTCAGAAGCCATACGTACCCGGTCCCAGGCCCAGCTCTGCCATTTGCCAGCCAGGGCAACCTaGCTGAGACTAAGTAGTCAC +
Preference number: 2 (lower is better)
Translates to: CCWSEAIRTRSQAQLCHLPARAT*LRLSSH
Trigger: GTGACTACTTAGTCTCAGGCAGGTTGCCCTGGCTGG...CAAATGGCAGAGCTGGGCCTGGGACCGGGTACGTATGGCTTCTGACCAACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CCA 90 bp CTTGAGCCGTGGTCACGTCTGCGTGCTGAATGGGACGGTAGGAGCATTTTAGAACCTAGGGAGGCTGTGTaGGGAGCATCCGTGGCTCCT +
Preference number: 2 (lower is better)
Translates to: LEPWSRLRAEWDGRSILEPREAV*GASVAP
Trigger: AGGAGCCACGGATGCTCCCCACACAGCCTCCCTAGG...TTCTAAAATGCTCCTACCGTCCCATTCAGCACGCAGACGTGACCACGGCTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR TCA 90 bp GTCCGGGGAGAAAGCAGAGGGTGCTCTGTGGCAGAAAATGCTCTTGAAGCTGCTCCCTGGCAGGGCATCTaGGAGCTCAAAGAATGCGCA +
Preference number: 2 (lower is better)
Translates to: VRGESRGCSVAENALEAAPWQGI*ELKECA
Trigger: TGCGCATTCTTTGAGCTCTCAGATGCCCTGCCAGGG...AGCAGCTTCAAGAGCATTTTCTGCCACAGAGCACCCTCTGCTTTCTCCCCGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR TCA 90 bp TGCTGTTGGTCAGAAGCCATACGTACCCGGTCCCAGGCCCAGCTCTGCCATTTGGGACAAAGACTCAGTTaGTTCTCAGGTCCTCAGTCC +
Preference number: 2 (lower is better)
Translates to: CCWSEAIRTRSQAQLCHLGQRLS*FSGPQS
Trigger: GGACTGAGGACCTGAGAATCAACTGAGTCTTTGTCC...CAAATGGCAGAGCTGGGCCTGGGACCGGGTACGTATGGCTTCTGACCAACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR GCA 90 bp GTCCGGGGAGAAAGCAGAGGGTGCTCTGTGGCAGAAAATGCTCTTGAAGCTGCTTCTCTGAGGAGGGAGTaGCCTCTCAGAGATGGGAGA +
Preference number: 2 (lower is better)
Translates to: VRGESRGCSVAENALEAASLRRE*PLRDGR
Trigger: TCTCCCATCTCTGAGAGGGCACTCCCTCCTCAGAGA...AGCAGCTTCAAGAGCATTTTCTGCCACAGAGCACCCTCTGCTTTCTCCCCGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CCA 90 bp TACATACTTGAGCCGTGGTCACGTCTGCGTGCTGAATGGGACGGTAGGAGCATTCTGGAGTCCTGGTATTaGGAGGTCCCAGGCGTTTCC +
Preference number: 2 (lower is better)
Translates to: YILEPWSRLRAEWDGRSILESWY*EVPGVS
Trigger: GGAAACGCCTGGGACCTCCCAATACCAGGACTCCAG...AATGCTCCTACCGTCCCATTCAGCACGCAGACGTGACCACGGCTCAAGTATGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CCA 90 bp TACATACTTGAGCCGTGGTCACGTCTGCGTGCTGAATGGGACGGTAGGAGCATTCCAGGTCAGAGATCCTaGGTGCCACCCTCTGAGTTC +
Preference number: 2 (lower is better)
Translates to: YILEPWSRLRAEWDGRSIPGQRS*VPPSEF
Trigger: GAACTCAGAGGGTGGCACCCAGGATCTCTGACCTGG...AATGCTCCTACCGTCCCATTCAGCACGCAGACGTGACCACGGCTCAAGTATGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CCA 90 bp GGGCAAAGGGATTCAGAAAGGGCCTGGCGCACTGAAGCCTCCATCTGCAGCCCAAGAGTAATGTCTGGTTaGCCAAAGGCCCATTTGGCT +
Preference number: 2 (lower is better)
Translates to: GQRDSERAWRTEASICSPRVMSG*PKAHLA
Trigger: AGCCAAATGGGCCTTTGGCCAACCAGACATTACTCT...TGGGCTGCAGATGGAGGCTTCAGTGCGCCAGGCCCTTTCTGAATCCCTTTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 90 bp CCCCAACAATTTGCTGTTCCGCTGGCTTGGCTGTCATTTATGCCCTaGTCAGTACGGCCTTCCAGGGCCTTGCTTCTCCTTCCAAAGTCC +
Preference number: 2 (lower is better)
Translates to: PQQFAVPLAWLSFMP*SVRPSRALLLLPKS
Trigger: GGACTTTGGAAGGAGAAGCAAGGCCCTGGAAGGCCGTACTGACAAGGGCATAAATGACAGCCAAGCCAGCGGAACAGCAAATTGTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR TCA 90 bp TACATACTTGAGCCGTGGTCACGTCTGCGTGCTGAATGGGACGGTAGGAGCATTAATGTGATCCATCTCTaGGCTGGGCCCCTTCCCCAA +
Preference number: 2 (lower is better)
Translates to: YILEPWSRLRAEWDGRSINVIHL*AGPLPQ
Trigger: TTGGGGAAGGGGCCCAGCTCAGAGATGGATCACATT...AATGCTCCTACCGTCCCATTCAGCACGCAGACGTGACCACGGCTCAAGTATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR TCA 90 bp GGGCAAAGGGATTCAGAAAGGGCCTGGCGCACTGAAGCCTCCATCTGCAGCCCATGTGGTCTAACCACCTaGTGTGTGACCTTGAAAAGA +
Preference number: 2 (lower is better)
Translates to: GQRDSERAWRTEASICSPCGLTT*CVTLKR
Trigger: TCTTTTCAAGGTCACACATCAGGTGGTTAGACCACA...TGGGCTGCAGATGGAGGCTTCAGTGCGCCAGGCCCTTTCTGAATCCCTTTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR GCA 90 bp GTCCGGGGAGAAAGCAGAGGGTGCTCTGTGGCAGAAAATGCTCTTGAAGCTGCTCCCCAACCTGCCGACTaGACACGTTCAGATTTAGCT +
Preference number: 2 (lower is better)
Translates to: VRGESRGCSVAENALEAAPQPAD*TRSDLA
Trigger: AGCTAAATCTGAACGTGTGCAGTCGGCAGGTTGGGG...AGCAGCTTCAAGAGCATTTTCTGCCACAGAGCACCCTCTGCTTTCTCCCCGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR GCA 90 bp CTTGAGCCGTGGTCACGTCTGCGTGCTGAATGGGACGGTAGGAGCATTTTAGAAGACACGATCTCCTCATaGCCGGCTAGCTCAGCTTTG +
Preference number: 2 (lower is better)
Translates to: LEPWSRLRAEWDGRSILEDTISS*PASSAL
Trigger: CAAAGCTGAGCTAGCCGGGCATGAGGAGATCGTGTC...TTCTAAAATGCTCCTACCGTCCCATTCAGCACGCAGACGTGACCACGGCTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 90 bp TCTGAGCCTTGGGTCCATATGTTCATAGAAATGACATGGTTGCTGTaGGTCAGAAGCCATACGTACCCGGTCCCAGGCCCAGCTCTGCCA +
Preference number: 2 (lower is better)
Translates to: SEPWVHMFIEMTWLL*VRSHTYPVPGPALP
Trigger: TGGCAGAGCTGGGCCTGGGACCGGGTACGTATGGCTTCTGACCAACAGCAACCATGTCATTTCTATGAACATATGGACCCAAGGCTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 90 bp GGTCCTTCTGAGCCTTGGGTCCATATGTTCATAGAAATGACATGGTaGCTGTTGGTCAGAAGCCATACGTACCCGGTCCCAGGCCCAGCT +
Preference number: 2 (lower is better)
Translates to: GPSEPWVHMFIEMTW*LLVRSHTYPVPGPA
Trigger: AGCTGGGCCTGGGACCGGGTACGTATGGCTTCTGACCAACAGCAACCATGTCATTTCTATGAACATATGGACCCAAGGCTCAGAAGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR GCA 90 bp AGTGACTCTTGTCCTAGTGGAAACTGTGCCCCAGATTTAGAAAGAGTATTGGTCGAGGAGGGTGGCTGGTaGCCTGGCAGGGCATCTGAG +
Preference number: 2 (lower is better)
Translates to: SDSCPSGNCAPDLERVLVEEGGW*PGRASE
Trigger: CTCAGATGCCCTGCCAGGGCACCAGCCACCCTCCTC...GACCAATACTCTTTCTAAATCTGGGGCACAGTTTCCACTAGGACAAGAGTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 90 bp TCCGTCACTGTGTCATTCATACTGCAACAGGTGCTGAATACATACTaGAGCCGTGGTCACGTCTGCGTGCTGAATGGGACGGTAGGAGCA +
Preference number: 2 (lower is better)
Translates to: SVTVSFILQQVLNTY*SRGHVCVLNGTVGA
Trigger: TGCTCCTACCGTCCCATTCAGCACGCAGACGTGACCACGGCTCAAGTATGTATTCAGCACCTGTTGCAGTATGAATGACACAGTGACGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 90 bp TCCAGAAGAGTTCGTGTTTCCCCAACAATTTGCTGTTCCGCTGGCTaGGCTGTCATTTATGCCCTTGTCAGTACGGCCTTCCAGGGCCTT +
Preference number: 2 (lower is better)
Translates to: SRRVRVSPTICCSAG*AVIYALVSTAFQGL
Trigger: AAGGCCCTGGAAGGCCGTACTGACAAGGGCATAAATGACAGCCAAGCCAGCGGAACAGCAAATTGTTGGGGAAACACGAACTCTTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR TCA 90 bp GTCCGGGGAGAAAGCAGAGGGTGCTCTGTGGCAGAAAATGCTCTTGAAGCTGCTGCAGTGAAAATAACCTaGAGTCATTCCCAGTGTGGC +
Preference number: 2 (lower is better)
Translates to: VRGESRGCSVAENALEAAAVKIT*SHSQCG
Trigger: GCCACACTGGGAATGACTTCAGGTTATTTTCACTGC...AGCAGCTTCAAGAGCATTTTCTGCCACAGAGCACCCTCTGCTTTCTCCCCGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR GCA 90 bp AGTGACTCTTGTCCTAGTGGAAACTGTGCCCCAGATTTAGAAAGAGTATTGGTCGCCCCTTCCCCAACCTaGCGACTGCACACGTTCAGA +
Preference number: 2 (lower is better)
Translates to: SDSCPSGNCAPDLERVLVAPSPT*RLHTFR
Trigger: TCTGAACGTGTGCAGTCGGCAGGTTGGGGAAGGGGC...GACCAATACTCTTTCTAAATCTGGGGCACAGTTTCCACTAGGACAAGAGTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR GCA 90 bp ACTGTGAAGCTCAAATACAAACTGCTGGTACCATTTCCTATTCCCAATTCTTGGCCCAGTCCCCAGCCCTaGGGTGGAGACACGATCTCC +
Preference number: 2 (lower is better)
Translates to: TVKLKYKLLVPFPIPNSWPSPQP*GGDTIS
Trigger: GGAGATCGTGTCTCCACCGCAGGGCTGGGGACTGGG...CCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCTTCACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CCA 90 bp AAGCAAATCTACTCCAGTCTTTCTCTCCCTGCTCCCTCAACTATCCCAGGACAAGAAGACGGCACAGCCTaGGAACAAGGTGACAAGAGC +
Preference number: 2 (lower is better)
Translates to: KQIYSSLSLPAPSTIPGQEDGTA*EQGDKS
Trigger: GCTCTTGTCACCTTGTTCCCAGGCTGTGCCGTCTTC...TTGTCCTGGGATAGTTGAGGGAGCAGGGAGAGAAAGACTGGAGTAGATTTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 90 bp GCCTCAGAGTCTCTTCTCCAGAAGAGTTCGTGTTTCCCCAACAATTaGCTGTTCCGCTGGCTTGGCTGTCATTTATGCCCTTGTCAGTAC +
Preference number: 2 (lower is better)
Translates to: ASESLLQKSSCFPNN*LFRWLGCHLCPCQY
Trigger: GTACTGACAAGGGCATAAATGACAGCCAAGCCAGCGGAACAGCAAATTGTTGGGGAAACACGAACTCTTCTGGAGAAGAGACTCTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR TCA 90 bp AGTGACTCTTGTCCTAGTGGAAACTGTGCCCCAGATTTAGAAAGAGTATTGGTCGCACCTTGGTGTGAATaGGGCAACCAGATCCCAGCG +
Preference number: 2 (lower is better)
Translates to: SDSCPSGNCAPDLERVLVAPWCE*GNQIPA
Trigger: CGCTGGGATCTGGTTGCCTCATTCACACCAAGGTGC...GACCAATACTCTTTCTAAATCTGGGGCACAGTTTCCACTAGGACAAGAGTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR GCA 90 bp TTAACCCAGTTGTTGGGGGAAGGGTGTTGTGTTTCAGGATCAGTTATTTTTGGTAGTCACTTGGATGCCTaGCAGGACCAAGCCGAGGGG +
Preference number: 2 (lower is better)
Translates to: LTQLLGEGCCVSGSVIFGSHLDA*QDQAEG
Trigger: CCCCTCGGCTTGGTCCTGGCAGGCATCCAAGTGACT...ACCAAAAATAACTGATCCTGAAACACAACACCCTTCCCCCAACAACTGGGTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CCA 90 bp TTAACCCAGTTGTTGGGGGAAGGGTGTTGTGTTTCAGGATCAGTTATTTTTGGTTCCCCAGCCCTGCGGTaGAGACACGATCTCCTCATG +
Preference number: 2 (lower is better)
Translates to: LTQLLGEGCCVSGSVIFGSPALR*RHDLLM
Trigger: CATGAGGAGATCGTGTCTCCACCGCAGGGCTGGGGA...ACCAAAAATAACTGATCCTGAAACACAACACCCTTCCCCCAACAACTGGGTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 90 bp CACACGAAGCCTCCTTTCAACCCCAACAGTCTGCTTGATGGTGTTTaGATCCTTTCAAAACTAGCGGAGAAAGGACTTGGAGGTGACAGG +
Preference number: 2 (lower is better)
Translates to: HTKPPFNPNSLLDGV*ILSKLAEKGLGGDR
Trigger: CCTGTCACCTCCAAGTCCTTTCTCCGCTAGTTTTGAAAGGATCAAAACACCATCAAGCAGACTGTTGGGGTTGAAAGGAGGCTTCGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR GCA 90 bp CAATTCTTGGTTGTTAGTTTGCTCCTTCTTCTCCAGTTCTTCACATATGGATATAGGGCTCTGACGGAATaGAGTCTCAGCCCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: QFLVVSLLLLLQFFTYGYRALTE*SLSPRG
Trigger: GCCCCTGGGGCTGAGACTGCATTCCGTCAGAGCCCT...ATATCCATATGTGAAGAACTGGAGAAGAAGGAGCAAACTAACAACCAAGAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR GCA 90 bp GTCCGGGGAGAAAGCAGAGGGTGCTCTGTGGCAGAAAATGCTCTTGAAGCTGCTAGCTCAAATACAAACTaGTGGTACCATTTCCTATTC +
Preference number: 2 (lower is better)
Translates to: VRGESRGCSVAENALEAASSNTN*WYHFLF
Trigger: GAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCT...AGCAGCTTCAAGAGCATTTTCTGCCACAGAGCACCCTCTGCTTTCTCCCCGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR GCA 90 bp AGTGACTCTTGTCCTAGTGGAAACTGTGCCCCAGATTTAGAAAGAGTATTGGTCTGTCCCTCAGCTTCATaGTTTACGGGGGTCCCACTT +
Preference number: 2 (lower is better)
Translates to: SDSCPSGNCAPDLERVLVCPSAS*FTGVPL
Trigger: AAGTGGGACCCCCGTAAAGCATGAAGCTGAGGGACA...GACCAATACTCTTTCTAAATCTGGGGCACAGTTTCCACTAGGACAAGAGTCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CCA 90 bp TGTGAAGCTCAAATACAAACTGCTGGTACCATTTCCTATTCCCAATTCTTGGTTGATCCATCTCTGAGCTaGGCCCCTTCCCCAACCTGC +
Preference number: 2 (lower is better)
Translates to: CEAQIQTAGTISYSQFLVDPSLS*APSPTC
Trigger: GCAGGTTGGGGAAGGGGCCCAGCTCAGAGATGGATC...AACCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCTTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CCA 90 bp AGTGACTCTTGTCCTAGTGGAAACTGTGCCCCAGATTTAGAAAGAGTATTGGTCGCTGTTCCGCTGGCTTaGCTGTCATTTATGCCCTTG +
Preference number: 2 (lower is better)
Translates to: SDSCPSGNCAPDLERVLVAVPLA*LSFMPL
Trigger: CAAGGGCATAAATGACAGCCAAGCCAGCGGAACAGC...GACCAATACTCTTTCTAAATCTGGGGCACAGTTTCCACTAGGACAAGAGTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR TCA 90 bp TTAACCCAGTTGTTGGGGGAAGGGTGTTGTGTTTCAGGATCAGTTATTTTTGGTGGATGGTCTGAAATGTaGTCCATCTCTGAGCTGGGC +
Preference number: 2 (lower is better)
Translates to: LTQLLGEGCCVSGSVIFGGWSEM*SISELG
Trigger: GCCCAGCTCAGAGATGGATCACATTTCAGACCATCC...ACCAAAAATAACTGATCCTGAAACACAACACCCTTCCCCCAACAACTGGGTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR TCA 90 bp AGTGACTCTTGTCCTAGTGGAAACTGTGCCCCAGATTTAGAAAGAGTATTGGTCGTAGGCTATGGATTGTaGACAGGGTCCTTACTGGGT +
Preference number: 2 (lower is better)
Translates to: SDSCPSGNCAPDLERVLVVGYGL*TGSLLG
Trigger: ACCCAGTAAGGACCCTGTTCACAATCCATAGCCTAC...GACCAATACTCTTTCTAAATCTGGGGCACAGTTTCCACTAGGACAAGAGTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR GCA 90 bp TGTGAAGCTCAAATACAAACTGCTGGTACCATTTCCTATTCCCAATTCTTGGTTAGCCGTGGTCACGTCTaGGTGCTGAATGGGACGGTA +
Preference number: 2 (lower is better)
Translates to: CEAQIQTAGTISYSQFLVSRGHV*VLNGTV
Trigger: TACCGTCCCATTCAGCACGCAGACGTGACCACGGCT...AACCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCTTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CCA 90 bp TGTGAAGCTCAAATACAAACTGCTGGTACCATTTCCTATTCCCAATTCTTGGTTCCCGTCACAGGAAGGTaGGCCTCTGACTACTCTCCT +
Preference number: 2 (lower is better)
Translates to: CEAQIQTAGTISYSQFLVPVTGR*ASDYSP
Trigger: AGGAGAGTAGTCAGAGGCCCACCTTCCTGTGACGGG...AACCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCTTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 90 bp TCCACTGAAACCACTGGGATCAGAGTAACTGATGCACTATTGACCTaGAAGATTCTGCCTGCTTCAATGGACTTAGCTGGAAGTTTCCAG +
Preference number: 2 (lower is better)
Translates to: STETTGIRVTDALLT*KILPASMDLAGSFQ
Trigger: CTGGAAACTTCCAGCTAAGTCCATTGAAGCAGGCAGAATCTTCAAGGTCAATAGTGCATCAGTTACTCTGATCCCAGTGGTTTCAGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 90 bp ATCCCTTCCACTGAAACCACTGGGATCAGAGTAACTGATGCACTATaGACCTTGAAGATTCTGCCTGCTTCAATGGACTTAGCTGGAAGT +
Preference number: 2 (lower is better)
Translates to: IPSTETTGIRVTDAL*TLKILPASMDLAGS
Trigger: ACTTCCAGCTAAGTCCATTGAAGCAGGCAGAATCTTCAAGGTCAATAGTGCATCAGTTACTCTGATCCCAGTGGTTTCAGTGGAAGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR TCA 90 bp TCCAGTGACTCTTGTCCTAGTGGAAACTGTGCCCCAGATTTAGAAAGAGTATTGCCCCAACAGTCTGCTTaGTGGTGTTTTGATCCTTTC +
Preference number: 2 (lower is better)
Translates to: SSDSCPSGNCAPDLERVLPQQSA*WCFDPF
Trigger: GAAAGGATCAAAACACCATCAAGCAGACTGTTGGGG...CAATACTCTTTCTAAATCTGGGGCACAGTTTCCACTAGGACAAGAGTCACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR GCA 90 bp CAATTCTTGGTTGTTAGTTTGCTCCTTCTTCTCCAGTTCTTCACATATGGATATGGCAAAGGTGATGTCTaGAGGAGCCCTAAGGCCCTG +
Preference number: 2 (lower is better)
Translates to: QFLVVSLLLLLQFFTYGYGKGDV*RSPKAL
Trigger: CAGGGCCTTAGGGCTCCTGCAGACATCACCTTTGCC...ATATCCATATGTGAAGAACTGGAGAAGAAGGAGCAAACTAACAACCAAGAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CCA 90 bp GTCTTACTTCAAGAACACCAAGTTTGCAGTCAGTTGATCTGGGTTTTGGTTGTGCGTCTGCGTGCTGAATaGGACGGTAGGAGCATTTTA +
Preference number: 2 (lower is better)
Translates to: VLLQEHQVCSQLIWVLVVRLRAE*DGRSIL
Trigger: TAAAATGCTCCTACCGTCCCATTCAGCACGCAGACG...CACAACCAAAACCCAGATCAACTGACTGCAAACTTGGTGTTCTTGAAGTAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CCA 90 bp TATGAAAGCACTAAAAGGCCTCTATGCCATTCACACTTTATGACTCGGTCCTTCAAGACAATCTTCGTGTaGCCTGACCTCCATTTCGGC +
Preference number: 2 (lower is better)
Translates to: YESTKRPLCHSHFMTRSFKTIFV*PDLHFG
Trigger: GCCGAAATGGAGGTCAGGCCACACGAAGATTGTCTT...GAAGGACCGAGTCATAAAGTGTGAATGGCATAGAGGCCTTTTAGTGCTTTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 90 bp CCCTCTGAGTTCTTTGCATTTGATGATGAGTCCTGGTTCTGCTTTTaGCATGATATGAAAGAACTGCACCCTAGGGAGGAACTGATGGAT +
Preference number: 2 (lower is better)
Translates to: PSEFFAFDDESWFCF*HDMKELHPREELMD
Trigger: ATCCATCAGTTCCTCCCTAGGGTGCAGTTCTTTCATATCATGCAAAAAGCAGAACCAGGACTCATCATCAAATGCAAAGAACTCAGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR TCA 90 bp CAATTCTTGGTTGTTAGTTTGCTCCTTCTTCTCCAGTTCTTCACATATGGATATTGCGACTGCAGCATCTaGCATGTGCCTCCATCTGTG +
Preference number: 2 (lower is better)
Translates to: QFLVVSLLLLLQFFTYGYCDCSI*HVPPSV
Trigger: CACAGATGGAGGCACATGTCAGATGCTGCAGTCGCA...ATATCCATATGTGAAGAACTGGAGAAGAAGGAGCAAACTAACAACCAAGAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR TCA 90 bp TATGAAAGCACTAAAAGGCCTCTATGCCATTCACACTTTATGACTCGGTCCTTCGATCTGGAGCACCTGTaGTGCTACACAAATGCTTTC +
Preference number: 2 (lower is better)
Translates to: YESTKRPLCHSHFMTRSFDLEHL*CYTNAF
Trigger: GAAAGCATTTGTGTAGCATCACAGGTGCTCCAGATC...GAAGGACCGAGTCATAAAGTGTGAATGGCATAGAGGCCTTTTAGTGCTTTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR GCA 90 bp ACTGTGAAGCTCAAATACAAACTGCTGGTACCATTTCCTATTCCCAATTCTTGGGCAGCATCTGACATGTaGCTCCATCTGTGGCAATGT +
Preference number: 2 (lower is better)
Translates to: TVKLKYKLLVPFPIPNSWAASDM*LHLWQC
Trigger: ACATTGCCACAGATGGAGGCACATGTCAGATGCTGC...CCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCTTCACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR GCA 90 bp TTAAAGACAATCTTCGTGTGGCCTGACCTCCATTTCGGCGTCAACCATGTATGTTTTTTCACTGTTAAGTaGGCTGTCTCTCTAGGCCTT +
Preference number: 2 (lower is better)
Translates to: LKTIFVWPDLHFGVNHVCFFTVK*AVSLGL
Trigger: AAGGCCTAGAGAGACAGCGCACTTAACAGTGAAAAA...ACATACATGGTTGACGCCGAAATGGAGGTCAGGCCACACGAAGATTGTCTTTAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CCA 90 bp AAGCAAATCTACTCCAGTCTTTCTCTCCCTGCTCCCTCAACTATCCCAGGACAAGTGCCCTCTCAGAGATaGGAGATTAATTTTATGTTC +
Preference number: 2 (lower is better)
Translates to: KQIYSSLSLPAPSTIPGQVPSQR*EINFMF
Trigger: GAACATAAAATTAATCTCCCATCTCTGAGAGGGCAC...TTGTCCTGGGATAGTTGAGGGAGCAGGGAGAGAAAGACTGGAGTAGATTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CCA 90 bp GTCTTACTTCAAGAACACCAAGTTTGCAGTCAGTTGATCTGGGTTTTGGTTGTGACGGAGAGTAATGTCTaGTTGGCCAAAGGCCCATTT +
Preference number: 2 (lower is better)
Translates to: VLLQEHQVCSQLIWVLVVTESNV*LAKGPF
Trigger: AAATGGGCCTTTGGCCAACCAGACATTACTCTCCGT...CACAACCAAAACCCAGATCAACTGACTGCAAACTTGGTGTTCTTGAAGTAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 90 bp CAAACTGCTGGTACCATTTCCTATTCCCAATTCTTGGTTGTTAGTTaGCTCCTTCTTCTCCAGTTCTTCACATATGGATATGGAGAGGCC +
Preference number: 2 (lower is better)
Translates to: QTAGTISYSQFLVVS*LLLLQFFTYGYGEA
Trigger: GGCCTCTCCATATCCATATGTGAAGAACTGGAGAAGAAGGAGCAAACTAACAACCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR TCA 90 bp AGTGACTCTTGTCCTAGTGGAAACTGTGCCCCAGATTTAGAAAGAGTATTGGTCAAGAGAAACAAGAAATaGTTCTCACACGAAGCCTCC +
Preference number: 2 (lower is better)
Translates to: SDSCPSGNCAPDLERVLVKRNKK*FSHEAS
Trigger: GGAGGCTTCGTGTGAGAATCATTTCTTGTTTCTCTT...GACCAATACTCTTTCTAAATCTGGGGCACAGTTTCCACTAGGACAAGAGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR TCA 90 bp TCCAGTGACTCTTGTCCTAGTGGAAACTGTGCCCCAGATTTAGAAAGAGTATTGGTTCTGCTTTTTGCATaGTATGAAAGAACTGCACCC +
Preference number: 2 (lower is better)
Translates to: SSDSCPSGNCAPDLERVLVLLFA*YERTAP
Trigger: GGGTGCAGTTCTTTCATATCATGCAAAAAGCAGAAC...CAATACTCTTTCTAAATCTGGGGCACAGTTTCCACTAGGACAAGAGTCACTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR TCA 90 bp CAATTCTTGGTTGTTAGTTTGCTCCTTCTTCTCCAGTTCTTCACATATGGATATCCAGCGATTACTGTGTaGCCAGAGCAGCCTCTGTTA +
Preference number: 2 (lower is better)
Translates to: QFLVVSLLLLLQFFTYGYPAITV*PEQPLL
Trigger: TAACAGAGGCTGCTCTGGTCACACAGTAATCGCTGG...ATATCCATATGTGAAGAACTGGAGAAGAAGGAGCAAACTAACAACCAAGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR TCA 90 bp TTAAAGACAATCTTCGTGTGGCCTGACCTCCATTTCGGCGTCAACCATGTATGTCAGAAAAGACAAAGTTaGCTAAACATGCTGACTTTC +
Preference number: 2 (lower is better)
Translates to: LKTIFVWPDLHFGVNHVCQKRQS*LNMLTF
Trigger: GAAAGTCAGCATGTTTAGTCAACTTTGTCTTTTCTG...ACATACATGGTTGACGCCGAAATGGAGGTCAGGCCACACGAAGATTGTCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR TCA 90 bp AGTCTTACTTCAAGAACACCAAGTTTGCAGTCAGTTGATCTGGGTTTTGGTTGTGAGGTTTTTGTTTGTTaGTCTGGAGCACCTGTGATG +
Preference number: 2 (lower is better)
Translates to: SLTSRTPSLQSVDLGFGCEVFVC*SGAPVM
Trigger: CATCACAGGTGCTCCAGATCAACAAACAAAAACCTC...ACAACCAAAACCCAGATCAACTGACTGCAAACTTGGTGTTCTTGAAGTAAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR TCA 90 bp TCCAGTGACTCTTGTCCTAGTGGAAACTGTGCCCCAGATTTAGAAAGAGTATTGCTAATTTCCATGGTATaGATACTTCCACCATGGCTA +
Preference number: 2 (lower is better)
Translates to: SSDSCPSGNCAPDLERVLLISMV*ILPPWL
Trigger: TAGCCATGGTGGAAGTATTCATACCATGGAAATTAG...CAATACTCTTTCTAAATCTGGGGCACAGTTTCCACTAGGACAAGAGTCACTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CCA 90 bp CAATTCTTGGTTGTTAGTTTGCTCCTTCTTCTCCAGTTCTTCACATATGGATATTACATACTTGAGCCGTaGTCACGTCTGCGTGCTGAA +
Preference number: 2 (lower is better)
Translates to: QFLVVSLLLLLQFFTYGYYILEP*SRLRAE
Trigger: TTCAGCACGCAGACGTGACCACGGCTCAAGTATGTA...ATATCCATATGTGAAGAACTGGAGAAGAAGGAGCAAACTAACAACCAAGAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CCA 90 bp ACTGTGAAGCTCAAATACAAACTGCTGGTACCATTTCCTATTCCCAATTCTTGGCCAGTTCTTCACATATaGATATGGAGAGGCCTTTTG +
Preference number: 2 (lower is better)
Translates to: TVKLKYKLLVPFPIPNSWPVLHI*IWRGLL
Trigger: CAAAAGGCCTCTCCATATCCATATGTGAAGAACTGG...CCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCTTCACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 90 bp ATGCTGACTTTCTTCAAATACACGAGAGACTTCTACAAGAAGATGTaGATGAATTGTTCTGACAACCAAATAAGAGAAAGCAGCCTGCGC +
Preference number: 2 (lower is better)
Translates to: MLTFFKYTRDFYKKM*MNCSDNQIRESSLR
Trigger: GCGCAGGCTGCTTTCTCTTATTTGGTTGTCAGAACAATTCATCAACATCTTCTTGTAGAAGTCTCTCGTGTATTTGAAGAAAGTCAGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 90 bp GAAGCTCAAATACAAACTGCTGGTACCATTTCCTATTCCCAATTCTaGGTTGTTAGTTTGCTCCTTCTTCTCCAGTTCTTCACATATGGA +
Preference number: 2 (lower is better)
Translates to: EAQIQTAGTISYSQF*VVSLLLLLQFFTYG
Trigger: TCCATATGTGAAGAACTGGAGAAGAAGGAGCAAACTAACAACCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 90 bp CTGGGAAGGCTTATAGGTGTCCAACTTAGAACAGAAAAGACAAAGTaGACTAAACATGCTGACTTTCTTCAAATACACGAGAGACTTCTA +
Preference number: 2 (lower is better)
Translates to: LGRLIGVQLRTEKTK*TKHADFLQIHERLL
Trigger: TAGAAGTCTCTCGTGTATTTGAAGAAAGTCAGCATGTTTAGTCAACTTTGTCTTTTCTGTTCTAAGTTGGACACCTATAAGCCTTCCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR TCA 90 bp TGTGAAGCTCAAATACAAACTGCTGGTACCATTTCCTATTCCCAATTCTTGGTTAGCCCTAAGGCCCTGTaGATGTTAGTTATATTCTTA +
Preference number: 2 (lower is better)
Translates to: CEAQIQTAGTISYSQFLVSPKAL*MLVIFL
Trigger: TAAGAATATAACTAACATTCACAGGGCCTTAGGGCT...AACCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCTTCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CCA 90 bp TGTGAAGCTCAAATACAAACTGCTGGTACCATTTCCTATTCCCAATTCTTGGTTTTTTGTTTGTTGATCTaGAGCACCTGTGATGCTACA +
Preference number: 2 (lower is better)
Translates to: CEAQIQTAGTISYSQFLVFCLLI*STCDAT
Trigger: TGTAGCATCACAGGTGCTCCAGATCAACAAACAAAA...AACCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCTTCACA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CCA 90 bp TATGAAAGCACTAAAAGGCCTCTATGCCATTCACACTTTATGACTCGGTCCTTCTTGCTAAGGTTGTTATaGGGATTACATGATCTACTA +
Preference number: 2 (lower is better)
Translates to: YESTKRPLCHSHFMTRSFLLRLL*GLHDLL
Trigger: TAGTAGATCATGTAATCCCCATAACAACCTTAGCAA...GAAGGACCGAGTCATAAAGTGTGAATGGCATAGAGGCCTTTTAGTGCTTTCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CCA 90 bp CAATTCTTGGTTGTTAGTTTGCTCCTTCTTCTCCAGTTCTTCACATATGGATATGGGGAGCACCATAGATaGAAGATAATAATACATTTC +
Preference number: 2 (lower is better)
Translates to: QFLVVSLLLLLQFFTYGYGEHHR*KIIIHF
Trigger: GAAATGTATTATTATCTTCCATCTATGGTGCTCCCC...ATATCCATATGTGAAGAACTGGAGAAGAAGGAGCAAACTAACAACCAAGAATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR TCA 72 bp AGACGGACCAGCCTCAGGTGTTCTTGGGCATCTGTGTaGTTGGAGGAGGGTGGCTGGTGCCCTGGCAGGGCA +
Preference number: 3 (lower is better)
Translates to: RRTSLRCSWASV*LEEGGWCPGRA
Trigger: TGCCCTGCCAGGGCACCAGCCACCCTCCTCCAATCACACAGATGCCCAAGAACACCTGAGGCTGGTCCGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR TCA 72 bp CAGAGCAGGAGAAGACGGCACAGCCTGGGAACAAGGTaGCAAGAGCCCGTCACAGGAAGGTGGGCCTCTGAC +
Preference number: 3 (lower is better)
Translates to: QSRRRRHSLGTR*QEPVTGRWASD
Trigger: GTCAGAGGCCCACCTTCCTGTGACGGGCTCTTGTCACCTTGTTCCCAGGCTGTGCCGTCTTCTCCTGCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CAA 90 bp GGGCAAAGGGATTCAGAAAGGGCCTGGCGCACTGAAGCCTCCATCTGCAGCCCAGCGTGGGGGTGTAAGTaGGCACCAAAAGTGGCTGGA +
Preference number: 3 (lower is better)
Translates to: GQRDSERAWRTEASICSPAWGCK*APKVAG
Trigger: TCCAGCCACTTTTGGTGCCAACTTACACCCCCACGC...TGGGCTGCAGATGGAGGCTTCAGTGCGCCAGGCCCTTTCTGAATCCCTTTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CCA 72 bp AAACCTGGGTGTGGGCAAAGGGATTCAGAAAGGGCCTaGCGCACTGAAGCCTCCATCTGCAGCCCACCCACT +
Preference number: 3 (lower is better)
Translates to: KPGCGQRDSERA*RTEASICSPPT
Trigger: AGTGGGTGGGCTGCAGATGGAGGCTTCAGTGCGCCAGGCCCTTTCTGAATCCCTTTGCCCACACCCAGGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CAA 90 bp GGGCAAAGGGATTCAGAAAGGGCCTGGCGCACTGAAGCCTCCATCTGCAGCCCACAGCCTCAGGTGTTCTaGGGCATCTGTGTGATTGGA +
Preference number: 3 (lower is better)
Translates to: GQRDSERAWRTEASICSPQPQVF*GICVIG
Trigger: TCCAATCACACAGATGCCCAAGAACACCTGAGGCTG...TGGGCTGCAGATGGAGGCTTCAGTGCGCCAGGCCCTTTCTGAATCCCTTTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR TCA 72 bp ATTGGAGGAGGGTGGCTGGTGCCCTGGCAGGGCATCTaGGAGCTCAAAGAATGCGCAGGCCCCAATCCTTTT +
Preference number: 3 (lower is better)
Translates to: IGGGWLVPWQGI*ELKECAGPNPF
Trigger: AAAAGGATTGGGGCCTGCGCATTCTTTGAGCTCTCAGATGCCCTGCCAGGGCACCAGCCACCCTCCTCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CAA 90 bp CACTTGGATGCCTGCCAGGACCAAGCCGAGGGGGTGAGGTGCAGGAACAGGGCACACCCTCTGAGTTCTTaGCATTTGATGATGAGTCCT +
Preference number: 3 (lower is better)
Translates to: HLDACQDQAEGVRCRNRAHPLSS*HLMMSP
Trigger: AGGACTCATCATCAAATGCAAAGAACTCAGAGGGTG...TGCCCTGTTCCTGCACCTCACCCCCTCGGCTTGGTCCTGGCAGGCATCCAAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CAA 90 bp TGCTGTTGGTCAGAAGCCATACGTACCCGGTCCCAGGCCCAGCTCTGCCATTTGGTGCTGAATACATACTaGAGCCGTGGTCACGTCTGC +
Preference number: 3 (lower is better)
Translates to: CCWSEAIRTRSQAQLCHLVLNTY*SRGHVC
Trigger: GCAGACGTGACCACGGCTCAAGTATGTATTCAGCAC...CAAATGGCAGAGCTGGGCCTGGGACCGGGTACGTATGGCTTCTGACCAACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CAA 90 bp TGCTGTTGGTCAGAAGCCATACGTACCCGGTCCCAGGCCCAGCTCTGCCATTTGGGCCCCAATCCTTTTTaGCGACTGCAGCATCTGACA +
Preference number: 3 (lower is better)
Translates to: CCWSEAIRTRSQAQLCHLGPNPF*RLQHLT
Trigger: TGTCAGATGCTGCAGTCGCAAAAAAGGATTGGGGCC...CAAATGGCAGAGCTGGGCCTGGGACCGGGTACGTATGGCTTCTGACCAACAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CCA 72 bp TGTCTGGATGGTCTGAAATGTGATCCATCTCTGAGCTaGGCCCCTTCCCCAACCTGCCGACTGCACACGTTC +
Preference number: 3 (lower is better)
Translates to: CLDGLKCDPSLS*APSPTCRLHTF
Trigger: GAACGTGTGCAGTCGGCAGGTTGGGGAAGGGGCCCAGCTCAGAGATGGATCACATTTCAGACCATCCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CAA 90 bp TACATACTTGAGCCGTGGTCACGTCTGCGTGCTGAATGGGACGGTAGGAGCATTTCTGGAGTCCTGGTATaGGGAGGTCCCAGGCGTTTC +
Preference number: 3 (lower is better)
Translates to: YILEPWSRLRAEWDGRSISGVLV*GGPRRF
Trigger: GAAACGCCTGGGACCTCCCAATACCAGGACTCCAGA...AATGCTCCTACCGTCCCATTCAGCACGCAGACGTGACCACGGCTCAAGTATGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CAA 90 bp GGGCAAAGGGATTCAGAAAGGGCCTGGCGCACTGAAGCCTCCATCTGCAGCCCATCAAGAACACCAAGTTaGCAGTCAGTTGATCTGGGT +
Preference number: 3 (lower is better)
Translates to: GQRDSERAWRTEASICSPSRTPS*QSVDLG
Trigger: ACCCAGATCAACTGACTGCAAACTTGGTGTTCTTGA...TGGGCTGCAGATGGAGGCTTCAGTGCGCCAGGCCCTTTCTGAATCCCTTTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CCA 72 bp CATACTGCAACAGGTGCTGAATACATACTTGAGCCGTaGTCACGTCTGCGTGCTGAATGGGACGGTAGGAGC +
Preference number: 3 (lower is better)
Translates to: HTATGAEYILEP*SRLRAEWDGRS
Trigger: GCTCCTACCGTCCCATTCAGCACGCAGACGTGACCACGGCTCAAGTATGTATTCAGCACCTGTTGCAGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR TCA 72 bp CCTGCTCCCTCAACTATCCCAGGACAAAGACTCAGTTaGTTCTCAGGTCCTCAGTCCACTGGTAAGCTGGCA +
Preference number: 3 (lower is better)
Translates to: PAPSTIPGQRLS*FSGPQSTGKLA
Trigger: TGCCAGCTTACCAGTGGACTGAGGACCTGAGAATCAACTGAGTCTTTGTCCTGGGATAGTTGAGGGAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CAA 90 bp TGCTGTTGGTCAGAAGCCATACGTACCCGGTCCCAGGCCCAGCTCTGCCATTTGCTGAGTTCTTTGCATTaGATGATGAGTCCTGGTTCT +
Preference number: 3 (lower is better)
Translates to: CCWSEAIRTRSQAQLCHLLSSLH*MMSPGS
Trigger: AGAACCAGGACTCATCATCAAATGCAAAGAACTCAG...CAAATGGCAGAGCTGGGCCTGGGACCGGGTACGTATGGCTTCTGACCAACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CAA 90 bp GTCCGGGGAGAAAGCAGAGGGTGCTCTGTGGCAGAAAATGCTCTTGAAGCTGCTATAAAGAGCACCTGCTaGCTAAGGTTGTTATGGGGA +
Preference number: 3 (lower is better)
Translates to: VRGESRGCSVAENALEAAIKSTC*LRLLWG
Trigger: TCCCCATAACAACCTTAGCAAGCAGGTGCTCTTTAT...AGCAGCTTCAAGAGCATTTTCTGCCACAGAGCACCCTCTGCTTTCTCCCCGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR TCA 72 bp GAGAGTGAGTCATTAACTCTTGCACCTTGGTGTGAATaGGGCAACCAGATCCCAGCGTTCTGTGCAGGGACT +
Preference number: 3 (lower is better)
Translates to: ESESLTLAPWCE*GNQIPAFCAGT
Trigger: AGTCCCTGCACAGAACGCTGGGATCTGGTTGCCTCATTCACACCAAGGTGCAAGAGTTAATGACTCACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CCA 72 bp ACCAGAGCAGCCTCTGTTATTAAATCTTGTATCGACTaGCACCTCCCTTCTGGTGCGTGGGGGTGTAAGTTG +
Preference number: 3 (lower is better)
Translates to: TRAASVIKSCID*HLPSGAWGCKL
Trigger: CAACTTACACCCCCACGCACCAGAAGGGAGGTGCCAGTCGATACAAGATTTAATAACAGAGGCTGCTCTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CCA 72 bp TTCGTGTTTCCCCAACAATTTGCTGTTCCGCTGGCTTaGCTGTCATTTATGCCCTTGTCAGTACGGCCTTCC +
Preference number: 3 (lower is better)
Translates to: FVFPQQFAVPLA*LSFMPLSVRPS
Trigger: GGAAGGCCGTACTGACAAGGGCATAAATGACAGCCAAGCCAGCGGAACAGCAAATTGTTGGGGAAACACGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CCA 72 bp TACATACTTGAGCCGTGGTCACGTCTGCGTGCTGAATaGGACGGTAGGAGCATTTTAGAAAGTGAGGAAAGG +
Preference number: 3 (lower is better)
Translates to: YILEPWSRLRAE*DGRSILESEER
Trigger: CCTTTCCTCACTTTCTAAAATGCTCCTACCGTCCCATTCAGCACGCAGACGTGACCACGGCTCAAGTATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CCA 72 bp AAGAGTTCGTGTTTCCCCAACAATTTGCTGTTCCGCTaGCTTGGCTGTCATTTATGCCCTTGTCAGTACGGC +
Preference number: 3 (lower is better)
Translates to: KSSCFPNNLLFR*LGCHLCPCQYG
Trigger: GCCGTACTGACAAGGGCATAAATGACAGCCAAGCCAGCGGAACAGCAAATTGTTGGGGAAACACGAACTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CAA 90 bp GTCCGGGGAGAAAGCAGAGGGTGCTCTGTGGCAGAAAATGCTCTTGAAGCTGCTATTCTTTTCTACTACTaGCTCAACAGAAGGCAAAGG +
Preference number: 3 (lower is better)
Translates to: VRGESRGCSVAENALEAAILFYY*LNRRQR
Trigger: CCTTTGCCTTCTGTTGAGCAAGTAGTAGAAAAGAAT...AGCAGCTTCAAGAGCATTTTCTGCCACAGAGCACCCTCTGCTTTCTCCCCGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR TCA 72 bp AGTAGGAAAGTAAGGCCCGGGGCCCTGTTCTTCATGTaGCATTCCTTGGCTCATTATGTTTTCTGTCCCTCA +
Preference number: 3 (lower is better)
Translates to: SRKVRPGALFFM*HSLAHYVFCPS
Trigger: TGAGGGACAGAAAACATAATGAGCCAAGGAATGTCACATGAAGAACAGGGCCCCGGGCCTTACTTTCCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR GCA 72 bp CTCTTCTCCAGAAGAGTTCGTGTTTCCCCAACAATTTaGTGTTCCGCTGGCTTGGCTGTCATTTATGCCCTT +
Preference number: 3 (lower is better)
Translates to: LFSRRVRVSPTI*CSAGLAVIYAL
Trigger: AAGGGCATAAATGACAGCCAAGCCAGCGGAACAGCAAATTGTTGGGGAAACACGAACTCTTCTGGAGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CAA 90 bp TCCAGTGACTCTTGTCCTAGTGGAAACTGTGCCCCAGATTTAGAAAGAGTATTGCTGTCATTTATGCCCTaGTCAGTACGGCCTTCCAGG +
Preference number: 3 (lower is better)
Translates to: SSDSCPSGNCAPDLERVLLSFMP*SVRPSR
Trigger: CCTGGAAGGCCGTACTGACAAGGGCATAAATGACAG...CAATACTCTTTCTAAATCTGGGGCACAGTTTCCACTAGGACAAGAGTCACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CAA 90 bp GTCTTACTTCAAGAACACCAAGTTTGCAGTCAGTTGATCTGGGTTTTGGTTGTGTGTGGCTCAGGTAACTaGGCACAACCAGAAGGCAAA +
Preference number: 3 (lower is better)
Translates to: VLLQEHQVCSQLIWVLVVCGSGN*AQPEGK
Trigger: TTTGCCTTCTGGTTGTGCCAAGTTACCTGAGCCACA...CACAACCAAAACCCAGATCAACTGACTGCAAACTTGGTGTTCTTGAAGTAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR TCA 72 bp AAAGCACTAAAAGGCCTCTATGCCATTCACACTTTATaGCTCGGTCCTTCTGAGCCTTGGGTCCATATGTTC +
Preference number: 3 (lower is better)
Translates to: KALKGLYAIHTL*LGPSEPWVHMF
Trigger: GAACATATGGACCCAAGGCTCAGAAGGACCGAGTCATAAAGTGTGAATGGCATAGAGGCCTTTTAGTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR TCA 72 bp GCCAATAGGCTGAGTTTGCGGAGCCCAATTTTTCCATaGAAGCCACCAAATAGAACTTTCCACACTAACAGC +
Preference number: 3 (lower is better)
Translates to: ANRLSLRSPIFP*KPPNRTFHTNS
Trigger: GCTGTTAGTGTGGAAAGTTCTATTTGGTGGCTTTCATGGAAAAATTGGGCTCCGCAAACTCAGCCTATTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CAA 90 bp GTCTTACTTCAAGAACACCAAGTTTGCAGTCAGTTGATCTGGGTTTTGGTTGTGGAATTAACCCAGTTGTaGGGGGAAGGGTGTTGTGTT +
Preference number: 3 (lower is better)
Translates to: VLLQEHQVCSQLIWVLVVELTQL*GEGCCV
Trigger: AACACAACACCCTTCCCCCAACAACTGGGTTAATTC...CACAACCAAAACCCAGATCAACTGACTGCAAACTTGGTGTTCTTGAAGTAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR TCA 72 bp CAGTCTTACTTCAAGAACACCAAGTTTGCAGTCAGTTaGTCTGGGTTTTGGTTGTGGTCTAACCACCTGATG +
Preference number: 3 (lower is better)
Translates to: QSYFKNTKFAVS*SGFWLWSNHLM
Trigger: CATCAGGTGGTTAGACCACAACCAAAACCCAGATCAACTGACTGCAAACTTGGTGTTCTTGAAGTAAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR TCA 72 bp CCTCTATGCCATTCACACTTTATGACTCGGTCCTTCTaGGCCTTGGGTCCATATGTTCATAGAAATGACATG +
Preference number: 3 (lower is better)
Translates to: PLCHSHFMTRSF*ALGPYVHRNDM
Trigger: CATGTCATTTCTATGAACATATGGACCCAAGGCTCAGAAGGACCGAGTCATAAAGTGTGAATGGCATAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CCA 72 bp TCATGCAGATACCAATTGTTAAAGACAATCTTCGTGTaGCCTGACCTCCATTTCGGCGTCAACCATGTATGT +
Preference number: 3 (lower is better)
Translates to: SCRYQLLKTIFV*PDLHFGVNHVC
Trigger: ACATACATGGTTGACGCCGAAATGGAGGTCAGGCCACACGAAGATTGTCTTTAACAATTGGTATCTGCATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CCA 72 bp CCCAGATTTAGAAAGAGTATTGGTCTGGGTAGGCTATaGATTGTGAACAGGGTCCTTACTGGGTTGCAAAAA +
Preference number: 3 (lower is better)
Translates to: PRFRKSIGLGRL*IVNRVLTGLQK
Trigger: TTTTTGCAACCCAGTAAGGACCCTGTTCACAATCCATAGCCTACCCAGACCAATACTCTTTCTAAATCTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CAA 90 bp AGTGACTCTTGTCCTAGTGGAAACTGTGCCCCAGATTTAGAAAGAGTATTGGTCCTGCTTGATGGTGTTTaGATCCTTTCAAAACTAGCG +
Preference number: 3 (lower is better)
Translates to: SDSCPSGNCAPDLERVLVLLDGV*ILSKLA
Trigger: CGCTAGTTTTGAAAGGATCAAAACACCATCAAGCAG...GACCAATACTCTTTCTAAATCTGGGGCACAGTTTCCACTAGGACAAGAGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR TCA 72 bp GAGAGACTTCTACAAGAAGATGTTGATGAATTGTTCTaGCAACCAAATAAGAGAAAGCAGCCTGCGCAGAGG +
Preference number: 3 (lower is better)
Translates to: ERLLQEDVDELF*QPNKRKQPAQR
Trigger: CCTCTGCGCAGGCTGCTTTCTCTTATTTGGTTGTCAGAACAATTCATCAACATCTTCTTGTAGAAGTCTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR GCA 72 bp CCCCCAAGGATACTGAGGGATGATTATACTGTTAAGTaGTTAACAACTGGCTTTCTAGGGAGAAAAATCCCT +
Preference number: 3 (lower is better)
Translates to: PPRILRDDYTVK*LTTGFLGRKIP
Trigger: AGGGATTTTTCTCCCTAGAAAGCCAGTTGTTAAGCACTTAACAGTATAATCATCCCTCAGTATCCTTGGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR TCA 72 bp ATTCATAATACAGTCTTGTGTGCAGTGAAAATAACCTaGAGTCATTCCCAGTGTGGCTCAGGTAACTTGGCA +
Preference number: 3 (lower is better)
Translates to: IHNTVLCAVKIT*SHSQCGSGNLA
Trigger: TGCCAAGTTACCTGAGCCACACTGGGAATGACTTCAGGTTATTTTCACTGCACACAAGACTGTATTATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR TCA 72 bp TCAGTTGATCTGGGTTTTGGTTGTGGTCTAACCACCTaGTGTGTGACCTTGAAAAGATCACTTCATGTCTTA +
Preference number: 3 (lower is better)
Translates to: SVDLGFGCGLTT*CVTLKRSLHVL
Trigger: TAAGACATGAAGTGATCTTTTCAAGGTCACACATCAGGTGGTTAGACCACAACCAAAACCCAGATCAACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR TCA 72 bp CTGAAATTTAACAATCTGACTAGGAGACGCCACTCATaGTGCTATTTGCAGCTGAACCTCAATCAAAGCCTA +
Preference number: 3 (lower is better)
Translates to: LKFNNLTRRRHS*CYLQLNLNQSL
Trigger: TAGGCTTTGATTGAGGTTCAGCTGCAAATAGCATCATGAGTGGCGTCTCCTAGTCAGATTGTTAAATTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CCA 72 bp ATGGATATGGAGAGGCCTTTTGGGGAGCACCATAGATaGAAGATAATAATACATTTCCCATGCTTTGTCCTA +
Preference number: 3 (lower is better)
Translates to: MDMERPFGEHHR*KIIIHFPCFVL
Trigger: TAGGACAAAGCATGGGAAATGTATTATTATCTTCCATCTATGGTGCTCCCCAAAAGGCCTCTCCATATCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CAA 90 bp TTAACCCAGTTGTTGGGGGAAGGGTGTTGTGTTTCAGGATCAGTTATTTTTGGTTCCTGGTTCTGCTTTTaGCATGATATGAAAGAACTG +
Preference number: 3 (lower is better)
Translates to: LTQLLGEGCCVSGSVIFGSWFCF*HDMKEL
Trigger: CAGTTCTTTCATATCATGCAAAAAGCAGAACCAGGA...ACCAAAAATAACTGATCCTGAAACACAACACCCTTCCCCCAACAACTGGGTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR-3UTR CAA 90 bp TCCAGTGACTCTTGTCCTAGTGGAAACTGTGCCCCAGATTTAGAAAGAGTATTGCAAGTAACAGGAAATTaGAGCTTTATAGAGCTGGTT +
Preference number: 3 (lower is better)
Translates to: SSDSCPSGNCAPDLERVLQVTGN*SFIELV
Trigger: AACCAGCTCTATAAAGCTCAAATTTCCTGTTACTTG...CAATACTCTTTCTAAATCTGGGGCACAGTTTCCACTAGGACAAGAGTCACTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR TCA 72 bp TTAGTGAGGTTTTTGTTTGTTGATCTGGAGCACCTGTaGTGCTACACAAATGCTTTCAAAGTGGTTGAGTCT +
Preference number: 3 (lower is better)
Translates to: LVRFLFVDLEHL*CYTNAFKVVES
Trigger: AGACTCAACCACTTTGAAAGCATTTGTGTAGCATCACAGGTGCTCCAGATCAACAAACAAAAACCTCACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR GCA 72 bp TTTCCCACCCGTAACATGAATACAATAAAGAGCACCTaGTTGCTAAGGTTGTTATGGGGATTACATGATCTA +
Preference number: 3 (lower is better)
Translates to: FPTRNMNTIKST*LLRLLWGLHDL
Trigger: TAGATCATGTAATCCCCATAACAACCTTAGCAAGCAGGTGCTCTTTATTGTATTCATGTTACGGGTGGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CCA 72 bp TACAAACTGCTGGTACCATTTCCTATTCCCAATTCTTaGTTGTTAGTTTGCTCCTTCTTCTCCAGTTCTTCA +
Preference number: 3 (lower is better)
Translates to: YKLLVPFPIPNS*LLVCSFFSSSS
Trigger: TGAAGAACTGGAGAAGAAGGAGCAAACTAACAACCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CCA 72 bp AATACAATAAAGAGCACCTGCTTGCTAAGGTTGTTATaGGGATTACATGATCTACTATATTCAAAGTACGCA +
Preference number: 3 (lower is better)
Translates to: NTIKSTCLLRLL*GLHDLLYSKYA
Trigger: TGCGTACTTTGAATATAGTAGATCATGTAATCCCCATAACAACCTTAGCAAGCAGGTGCTCTTTATTGTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp GGGCAAAGGGATTCAGAAAGGGCCTGGCGCACTGAAGCCTCCATCTGCAGCCCAAGGGCGTCACCGGGTTaGCGTGCAGCCCCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GQRDSERAWRTEASICSPRASPG*RAAPPP
Trigger: AGGAGGCGGGGCTGCACGCCAACCCGGTGACGCCCT...TGGGCTGCAGATGGAGGCTTCAGTGCGCCAGGCCCTTTCTGAATCCCTTTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp CACTTGGATGCCTGCCAGGACCAAGCCGAGGGGGTGAGGTGCAGGAACAGGGCACCCCTCTCAGGGCTCTaGCGGAATGCAGTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: HLDACQDQAEGVRCRNRAPLSGL*RNAVSA
Trigger: GGCTGAGACTGCATTCCGTCAGAGCCCTGAGAGGGG...TGCCCTGTTCCTGCACCTCACCCCCTCGGCTTGGTCCTGGCAGGCATCCAAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp GCCTGGGAACAAGGTGACAAGAGCCCGTCACAGGAAGGTGGGCCTCTGACTACTGCCGGCGCGGGGAGGTaGATGTCCGTGGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: AWEQGDKSPSQEGGPLTTAGAGR*MSVARK
Trigger: CTTCCTGGCCACGGACATGCACCTCCCCGCGCCGGC...AGTAGTCAGAGGCCCACCTTCCTGTGACGGGCTCTTGTCACCTTGTTCCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp CACTTGGATGCCTGCCAGGACCAAGCCGAGGGGGTGAGGTGCAGGAACAGGGCAAGGGCTCTGACGGAATaGAGTCTCAGCCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: HLDACQDQAEGVRCRNRARALTE*SLSPRG
Trigger: GCCCCTGGGGCTGAGACTGCATTCCGTCAGAGCCCT...TGCCCTGTTCCTGCACCTCACCCCCTCGGCTTGGTCCTGGCAGGCATCCAAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp GGGCAAAGGGATTCAGAAAGGGCCTGGCGCACTGAAGCCTCCATCTGCAGCCCAGCTCCAGGCGATAGGTaGAGCAGTCGGCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: GQRDSERAWRTEASICSPAPGDR*SSRPGW
Trigger: CCACCCAGGCCGACTGCTTCACCTATCGCCTGGAGC...TGGGCTGCAGATGGAGGCTTCAGTGCGCCAGGCCCTTTCTGAATCCCTTTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp GGGCAAAGGGATTCAGAAAGGGCCTGGCGCACTGAAGCCTCCATCTGCAGCCCAACCAAGCCGAGGGGGTaGGGTGCAGGAACAGGGCAC +
Preference number: 4 (lower is better)
Translates to: GQRDSERAWRTEASICSPTKPRG*GAGTGH
Trigger: GTGCCCTGTTCCTGCACCTCACCCCCTCGGCTTGGT...TGGGCTGCAGATGGAGGCTTCAGTGCGCCAGGCCCTTTCTGAATCCCTTTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp CACTTGGATGCCTGCCAGGACCAAGCCGAGGGGGTGAGGTGCAGGAACAGGGCAGGTGAGGGTGGAAGCTaGCTTGCTCTGGAGCGCTCT +
Preference number: 4 (lower is better)
Translates to: HLDACQDQAEGVRCRNRAGEGGS*LALERS
Trigger: AGAGCGCTCCAGAGCAAGGCAGCTTCCACCCTCACC...TGCCCTGTTCCTGCACCTCACCCCCTCGGCTTGGTCCTGGCAGGCATCCAAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp CACTTGGATGCCTGCCAGGACCAAGCCGAGGGGGTGAGGTGCAGGAACAGGGCAAGCCGTGGTCACGTCTaGGTGCTGAATGGGACGGTA +
Preference number: 4 (lower is better)
Translates to: HLDACQDQAEGVRCRNRASRGHV*VLNGTV
Trigger: TACCGTCCCATTCAGCACGCAGACGTGACCACGGCT...TGCCCTGTTCCTGCACCTCACCCCCTCGGCTTGGTCCTGGCAGGCATCCAAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp TGCTGTTGGTCAGAAGCCATACGTACCCGGTCCCAGGCCCAGCTCTGCCATTTGGAGGAGGGTGGCTGGTaGCCTGGCAGGGCATCTGAG +
Preference number: 4 (lower is better)
Translates to: CCWSEAIRTRSQAQLCHLEEGGW*PGRASE
Trigger: CTCAGATGCCCTGCCAGGGCACCAGCCACCCTCCTC...CAAATGGCAGAGCTGGGCCTGGGACCGGGTACGTATGGCTTCTGACCAACAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp CACTTGGATGCCTGCCAGGACCAAGCCGAGGGGGTGAGGTGCAGGAACAGGGCAGGCCTTCCAGGGCCTTaGTTCTCCTTCCAAAGTCCC +
Preference number: 4 (lower is better)
Translates to: HLDACQDQAEGVRCRNRAGLPGP*FSFQSP
Trigger: GGGACTTTGGAAGGAGAAGCAAGGCCCTGGAAGGCC...TGCCCTGTTCCTGCACCTCACCCCCTCGGCTTGGTCCTGGCAGGCATCCAAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp CACTTGGATGCCTGCCAGGACCAAGCCGAGGGGGTGAGGTGCAGGAACAGGGCACCCGTCACAGGAAGGTaGGCCTCTGACTACTCTCCT +
Preference number: 4 (lower is better)
Translates to: HLDACQDQAEGVRCRNRAPVTGR*ASDYSP
Trigger: AGGAGAGTAGTCAGAGGCCCACCTTCCTGTGACGGG...TGCCCTGTTCCTGCACCTCACCCCCTCGGCTTGGTCCTGGCAGGCATCCAAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp TGCTGTTGGTCAGAAGCCATACGTACCCGGTCCCAGGCCCAGCTCTGCCATTTGGCGTGGCCTCCCACTTaGGGCGCCGATGGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: CCWSEAIRTRSQAQLCHLAWPPT*GADGFC
Trigger: ACAGAAACCATCGGCGCCTCAAGTGGGAGGCCACGC...CAAATGGCAGAGCTGGGCCTGGGACCGGGTACGTATGGCTTCTGACCAACAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp TACATACTTGAGCCGTGGTCACGTCTGCGTGCTGAATGGGACGGTAGGAGCATTGTCACCGGGTTGGCGTaGAGCCCCGCCTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: YILEPWSRLRAEWDGRSIVTGLA*SPASWW
Trigger: CCACCAGGAGGCGGGGCTGCACGCCAACCCGGTGAC...AATGCTCCTACCGTCCCATTCAGCACGCAGACGTGACCACGGCTCAAGTATGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp CACTTGGATGCCTGCCAGGACCAAGCCGAGGGGGTGAGGTGCAGGAACAGGGCAGCAAAGAACTGGGGGTaGCCTTCATGCCTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: HLDACQDQAEGVRCRNRAAKNWG*PSCLSC
Trigger: ACAGGAGAGGCATGAAGGGCACCCCCAGTTCTTTGC...TGCCCTGTTCCTGCACCTCACCCCCTCGGCTTGGTCCTGGCAGGCATCCAAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp CTTGAGCCGTGGTCACGTCTGCGTGCTGAATGGGACGGTAGGAGCATTTTAGAATGCTCTGGAGCGCTCTaGGTGACGGCGCGCCGACTG +
Preference number: 4 (lower is better)
Translates to: LEPWSRLRAEWDGRSILECSGAL*VTARRL
Trigger: CAGTCGGCGCGCCGTCACTCAGAGCGCTCCAGAGCA...TTCTAAAATGCTCCTACCGTCCCATTCAGCACGCAGACGTGACCACGGCTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp CACTTGGATGCCTGCCAGGACCAAGCCGAGGGGGTGAGGTGCAGGAACAGGGCACCAGCGATTACTGTGTaGCCAGAGCAGCCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: HLDACQDQAEGVRCRNRAPAITV*PEQPLL
Trigger: TAACAGAGGCTGCTCTGGTCACACAGTAATCGCTGG...TGCCCTGTTCCTGCACCTCACCCCCTCGGCTTGGTCCTGGCAGGCATCCAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp GGGCAAAGGGATTCAGAAAGGGCCTGGCGCACTGAAGCCTCCATCTGCAGCCCATTGGGGTCCCACCCATaGTCCCTTCCCCTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: GQRDSERAWRTEASICSPLGSHP*SLPLSL
Trigger: AAGGGAAAGGGGAAGGGATCATGGGTGGGACCCCAA...TGGGCTGCAGATGGAGGCTTCAGTGCGCCAGGCCCTTTCTGAATCCCTTTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp GCCTGGGAACAAGGTGACAAGAGCCCGTCACAGGAAGGTGGGCCTCTGACTACTTCAACCCTATGGATCTaGCGCAGGTGGGGCACCACC +
Preference number: 4 (lower is better)
Translates to: AWEQGDKSPSQEGGPLTTSTLWI*RRWGTT
Trigger: GGTGGTGCCCCACCTGCGGCAGATCCATAGGGTTGA...AGTAGTCAGAGGCCCACCTTCCTGTGACGGGCTCTTGTCACCTTGTTCCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp CTTGAGCCGTGGTCACGTCTGCGTGCTGAATGGGACGGTAGGAGCATTTTAGAACCCAGTCCCCAGCCCTaGGGTGGAGACACGATCTCC +
Preference number: 4 (lower is better)
Translates to: LEPWSRLRAEWDGRSILEPSPQP*GGDTIS
Trigger: GGAGATCGTGTCTCCACCGCAGGGCTGGGGACTGGG...TTCTAAAATGCTCCTACCGTCCCATTCAGCACGCAGACGTGACCACGGCTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp GCCTGGGAACAAGGTGACAAGAGCCCGTCACAGGAAGGTGGGCCTCTGACTACTTCACATTTCAGCTTCTaGGGGGAGGACCTCTGTCGC +
Preference number: 4 (lower is better)
Translates to: AWEQGDKSPSQEGGPLTTSHFSF*GEDLCR
Trigger: GCGACAGAGGTCCTCCCCTCAGAAGCTGAAATGTGA...AGTAGTCAGAGGCCCACCTTCCTGTGACGGGCTCTTGTCACCTTGTTCCCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp TGCTGTTGGTCAGAAGCCATACGTACCCGGTCCCAGGCCCAGCTCTGCCATTTGAATGTGATCCATCTCTaGGCTGGGCCCCTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: CCWSEAIRTRSQAQLCHLNVIHL*AGPLPQ
Trigger: TTGGGGAAGGGGCCCAGCTCAGAGATGGATCACATT...CAAATGGCAGAGCTGGGCCTGGGACCGGGTACGTATGGCTTCTGACCAACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp GGGCAAAGGGATTCAGAAAGGGCCTGGCGCACTGAAGCCTCCATCTGCAGCCCAGGACAAAGACTCAGTTaGTTCTCAGGTCCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: GQRDSERAWRTEASICSPGQRLS*FSGPQS
Trigger: GGACTGAGGACCTGAGAATCAACTGAGTCTTTGTCC...TGGGCTGCAGATGGAGGCTTCAGTGCGCCAGGCCCTTTCTGAATCCCTTTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp GTCCGGGGAGAAAGCAGAGGGTGCTCTGTGGCAGAAAATGCTCTTGAAGCTGCTGCACCTTGGTGTGAATaGGGCAACCAGATCCCAGCG +
Preference number: 4 (lower is better)
Translates to: VRGESRGCSVAENALEAAAPWCE*GNQIPA
Trigger: CGCTGGGATCTGGTTGCCTCATTCACACCAAGGTGC...AGCAGCTTCAAGAGCATTTTCTGCCACAGAGCACCCTCTGCTTTCTCCCCGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp TGCTGTTGGTCAGAAGCCATACGTACCCGGTCCCAGGCCCAGCTCTGCCATTTGTCTCCCACCCTGCTGTaGTCATCAGCAATGTCTAGG +
Preference number: 4 (lower is better)
Translates to: CCWSEAIRTRSQAQLCHLSPTLL*SSAMSR
Trigger: CCTAGACATTGCTGATGAGCACAGCAGGGTGGGAGA...CAAATGGCAGAGCTGGGCCTGGGACCGGGTACGTATGGCTTCTGACCAACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp TACATACTTGAGCCGTGGTCACGTCTGCGTGCTGAATGGGACGGTAGGAGCATTGGAGGTGCATGTCCGTaGCCAGGAAGACGATCTCGG +
Preference number: 4 (lower is better)
Translates to: YILEPWSRLRAEWDGRSIGGACP*PGRRSR
Trigger: CCGAGATCGTCTTCCTGGCCACGGACATGCACCTCC...AATGCTCCTACCGTCCCATTCAGCACGCAGACGTGACCACGGCTCAAGTATGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp GGGCAAAGGGATTCAGAAAGGGCCTGGCGCACTGAAGCCTCCATCTGCAGCCCATGTCCACGAGATTCCTaGAACCAATCCCCCAAGGAT +
Preference number: 4 (lower is better)
Translates to: GQRDSERAWRTEASICSPCPRDS*NQSPKD
Trigger: ATCCTTGGGGGATTGGTTCCAGGAATCTCGTGGACA...TGGGCTGCAGATGGAGGCTTCAGTGCGCCAGGCCCTTTCTGAATCCCTTTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp CACTTGGATGCCTGCCAGGACCAAGCCGAGGGGGTGAGGTGCAGGAACAGGGCACATGTTCCACACCTGTaGATTCCACCAACTGTGAAT +
Preference number: 4 (lower is better)
Translates to: HLDACQDQAEGVRCRNRAHVPHL*IPPTVN
Trigger: ATTCACAGTTGGTGGAATCCACAGGTGTGGAACATG...TGCCCTGTTCCTGCACCTCACCCCCTCGGCTTGGTCCTGGCAGGCATCCAAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp GCCTGGGAACAAGGTGACAAGAGCCCGTCACAGGAAGGTGGGCCTCTGACTACTATGACTCGGTCCTTCTaGGCCTTGGGTCCATATGTT +
Preference number: 4 (lower is better)
Translates to: AWEQGDKSPSQEGGPLTTMTRSF*ALGPYV
Trigger: AACATATGGACCCAAGGCTCAGAAGGACCGAGTCAT...AGTAGTCAGAGGCCCACCTTCCTGTGACGGGCTCTTGTCACCTTGTTCCCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp CACTTGGATGCCTGCCAGGACCAAGCCGAGGGGGTGAGGTGCAGGAACAGGGCAATCCCCCAAGGATACTaGGGGATGATTATACTGTTA +
Preference number: 4 (lower is better)
Translates to: HLDACQDQAEGVRCRNRAIPQGY*GMIILL
Trigger: TAACAGTATAATCATCCCTCAGTATCCTTGGGGGAT...TGCCCTGTTCCTGCACCTCACCCCCTCGGCTTGGTCCTGGCAGGCATCCAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp GCCTGGGAACAAGGTGACAAGAGCCCGTCACAGGAAGGTGGGCCTCTGACTACTTTCCATCCCTTCCACTaGAACCACTGGGATCAGAGT +
Preference number: 4 (lower is better)
Translates to: AWEQGDKSPSQEGGPLTTFHPFH*NHWDQS
Trigger: ACTCTGATCCCAGTGGTTTCAGTGGAAGGGATGGAA...AGTAGTCAGAGGCCCACCTTCCTGTGACGGGCTCTTGTCACCTTGTTCCCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp GTCCGGGGAGAAAGCAGAGGGTGCTCTGTGGCAGAAAATGCTCTTGAAGCTGCTCCAGCCAGGGCAACCTaGCTGAGACTAAGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: VRGESRGCSVAENALEAAPARAT*LRLSSH
Trigger: GTGACTACTTAGTCTCAGGCAGGTTGCCCTGGCTGG...AGCAGCTTCAAGAGCATTTTCTGCCACAGAGCACCCTCTGCTTTCTCCCCGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp CTTGAGCCGTGGTCACGTCTGCGTGCTGAATGGGACGGTAGGAGCATTTTAGAAGGCAAAGGTGATGTCTaGAGGAGCCCTAAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LEPWSRLRAEWDGRSILEGKGDV*RSPKAL
Trigger: CAGGGCCTTAGGGCTCCTGCAGACATCACCTTTGCC...TTCTAAAATGCTCCTACCGTCCCATTCAGCACGCAGACGTGACCACGGCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp CTTGAGCCGTGGTCACGTCTGCGTGCTGAATGGGACGGTAGGAGCATTTTAGAAAGGATGTCAACCCTATaGATCTGCCGCAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: LEPWSRLRAEWDGRSILERMSTL*ICRRWG
Trigger: GCCCCACCTGCGGCAGATCCATAGGGTTGACATCCT...TTCTAAAATGCTCCTACCGTCCCATTCAGCACGCAGACGTGACCACGGCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp GCCTGGGAACAAGGTGACAAGAGCCCGTCACAGGAAGGTGGGCCTCTGACTACTTCCCAATCAGCATCATaGTGGCAAAGAACTGGGGGT +
Preference number: 4 (lower is better)
Translates to: AWEQGDKSPSQEGGPLTTSQSAS*WQRTGG
Trigger: ACCCCCAGTTCTTTGCCACCATGATGCTGATTGGGA...AGTAGTCAGAGGCCCACCTTCCTGTGACGGGCTCTTGTCACCTTGTTCCCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp GGGCAAAGGGATTCAGAAAGGGCCTGGCGCACTGAAGCCTCCATCTGCAGCCCACTTCACATATGGATATaGAGAGGCCTTTTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: GQRDSERAWRTEASICSPLHIWI*RGLLGS
Trigger: GCTCCCCAAAAGGCCTCTCCATATCCATATGTGAAG...TGGGCTGCAGATGGAGGCTTCAGTGCGCCAGGCCCTTTCTGAATCCCTTTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp GCCTGGGAACAAGGTGACAAGAGCCCGTCACAGGAAGGTGGGCCTCTGACTACTAAGACAATCTTCGTGTaGCCTGACCTCCATTTCGGC +
Preference number: 4 (lower is better)
Translates to: AWEQGDKSPSQEGGPLTTKTIFV*PDLHFG
Trigger: GCCGAAATGGAGGTCAGGCCACACGAAGATTGTCTT...AGTAGTCAGAGGCCCACCTTCCTGTGACGGGCTCTTGTCACCTTGTTCCCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 72 bp GACTGGCACCTCCCTTCTGGTGCGTGGGGGTGTAAGTaGGCACCAAAAGTGGCTGGAGAATTAACCCAGTTG +
Preference number: 4 (lower is better)
Translates to: DWHLPSGAWGCK*APKVAGELTQL
Trigger: CAACTGGGTTAATTCTCCAGCCACTTTTGGTGCCAACTTACACCCCCACGCACCAGAAGGGAGGTGCCAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp AAGCAAATCTACTCCAGTCTTTCTCTCCCTGCTCCCTCAACTATCCCAGGACAACAGCGGAGGAAGCTGTaGGTCCTTGGGCCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: KQIYSSLSLPAPSTIPGQQRRKL*VLGPWK
Trigger: CTTCCAGGGCCCAAGGACTCACAGCTTCCTCCGCTG...TTGTCCTGGGATAGTTGAGGGAGCAGGGAGAGAAAGACTGGAGTAGATTTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp AGAAATGATTCTCACACGAAGCCTCCTTTCAACCCCAACAGTCTGCTTGATGGTGTGCCAGCGAGGTGTTaGGGACGAGGCAGTCCCCGT +
Preference number: 4 (lower is better)
Translates to: RNDSHTKPPFNPNSLLDGVPARC*GRGSPR
Trigger: ACGGGGACTGCCTCGTCCTCAACACCTCGCTGGCAC...ACCATCAAGCAGACTGTTGGGGTTGAAAGGAGGCTTCGTGTGAGAATCATTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp GCCTGGGAACAAGGTGACAAGAGCCCGTCACAGGAAGGTGGGCCTCTGACTACTGGCAGAAAATGCTCTTaGAGCTGCTTAAGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: AWEQGDKSPSQEGGPLTTGRKCS*SCLSLR
Trigger: TCTGAGGCTTAAGCAGCTTCAAGAGCATTTTCTGCC...AGTAGTCAGAGGCCCACCTTCCTGTGACGGGCTCTTGTCACCTTGTTCCCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp AGAAATGATTCTCACACGAAGCCTCCTTTCAACCCCAACAGTCTGCTTGATGGTAGCCCACCCACTTCCTaGGCCCCCTGCTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: RNDSHTKPPFNPNSLLDGSPPTS*APCFQV
Trigger: CACCTGGAAGCAGGGGGCCCAGGAAGTGGGTGGGCT...ACCATCAAGCAGACTGTTGGGGTTGAAAGGAGGCTTCGTGTGAGAATCATTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 72 bp TTTGCTGTTCCGCTGGCTTGGCTGTCATTTATGCCCTaGTCAGTACGGCCTTCCAGGGCCTTGCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: FAVPLAWLSFMP*SVRPSRALLLL
Trigger: AAGGAGAAGCAAGGCCCTGGAAGGCCGTACTGACAAGGGCATAAATGACAGCCAAGCCAGCGGAACAGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp AAGCAAATCTACTCCAGTCTTTCTCTCCCTGCTCCCTCAACTATCCCAGGACAATGGTGGGAGAGATGGTaGGGGTGGAAGCTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: KQIYSSLSLPAPSTIPGQWWERW*GWKLPC
Trigger: GCAAGGCAGCTTCCACCCTCACCATCTCTCCCACCA...TTGTCCTGGGATAGTTGAGGGAGCAGGGAGAGAAAGACTGGAGTAGATTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp GCCTGGGAACAAGGTGACAAGAGCCCGTCACAGGAAGGTGGGCCTCTGACTACTATCTTATGTGGTGTTTaGCACCACTGCTTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: AWEQGDKSPSQEGGPLTTILCGV*HHCLLC
Trigger: ACACAGCAAGCAGTGGTGTCAAACACCACATAAGAT...AGTAGTCAGAGGCCCACCTTCCTGTGACGGGCTCTTGTCACCTTGTTCCCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp CACTTGGATGCCTGCCAGGACCAAGCCGAGGGGGTGAGGTGCAGGAACAGGGCAAGCTCAAATACAAACTaGTGGTACCATTTCCTATTC +
Preference number: 4 (lower is better)
Translates to: HLDACQDQAEGVRCRNRASSNTN*WYHFLF
Trigger: GAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCT...TGCCCTGTTCCTGCACCTCACCCCCTCGGCTTGGTCCTGGCAGGCATCCAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp AAGCAAATCTACTCCAGTCTTTCTCTCCCTGCTCCCTCAACTATCCCAGGACAATCCCCAGCCCTGCGGTaGAGACACGATCTCCTCATG +
Preference number: 4 (lower is better)
Translates to: KQIYSSLSLPAPSTIPGQSPALR*RHDLLM
Trigger: CATGAGGAGATCGTGTCTCCACCGCAGGGCTGGGGA...TTGTCCTGGGATAGTTGAGGGAGCAGGGAGAGAAAGACTGGAGTAGATTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp TACATACTTGAGCCGTGGTCACGTCTGCGTGCTGAATGGGACGGTAGGAGCATTCTGTGCAGGGACTCCTaGGACTCTAAGGTGAGAAAC +
Preference number: 4 (lower is better)
Translates to: YILEPWSRLRAEWDGRSILCRDS*DSKVRN
Trigger: GTTTCTCACCTTAGAGTCCCAGGAGTCCCTGCACAG...AATGCTCCTACCGTCCCATTCAGCACGCAGACGTGACCACGGCTCAAGTATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp GCCTGGGAACAAGGTGACAAGAGCCCGTCACAGGAAGGTGGGCCTCTGACTACTCTGCCATTTGCTAGCTaGGTGATCTTAAGCAAGTTG +
Preference number: 4 (lower is better)
Translates to: AWEQGDKSPSQEGGPLTTLPFAS*VILSKL
Trigger: CAACTTGCTTAAGATCACCCAGCTAGCAAATGGCAG...AGTAGTCAGAGGCCCACCTTCCTGTGACGGGCTCTTGTCACCTTGTTCCCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp GTCTTACTTCAAGAACACCAAGTTTGCAGTCAGTTGATCTGGGTTTTGGTTGTGAAGGAGCGCAGCCTCTaGGACACTCCGCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: VLLQEHQVCSQLIWVLVVKERSL*DTPLQP
Trigger: GGGCTGGAGCGGAGTGTCTCAGAGGCTGCGCTCCTT...CACAACCAAAACCCAGATCAACTGACTGCAAACTTGGTGTTCTTGAAGTAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp AGTCTTACTTCAAGAACACCAAGTTTGCAGTCAGTTGATCTGGGTTTTGGTTGTCTGGAGCGCTCTGAGTaGCGGCGCGCCGACTGGACA +
Preference number: 4 (lower is better)
Translates to: SLTSRTPSLQSVDLGFGCLERSE*RRADWT
Trigger: TGTCCAGTCGGCGCGCCGTCACTCAGAGCGCTCCAG...ACAACCAAAACCCAGATCAACTGACTGCAAACTTGGTGTTCTTGAAGTAAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp GTCTTACTTCAAGAACACCAAGTTTGCAGTCAGTTGATCTGGGTTTTGGTTGTGAAGGGCCTGGCGCACTaGAGCCTCCATCTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: VLLQEHQVCSQLIWVLVVKGLAH*SLHLQP
Trigger: GGGCTGCAGATGGAGGCTTCAGTGCGCCAGGCCCTT...CACAACCAAAACCCAGATCAACTGACTGCAAACTTGGTGTTCTTGAAGTAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp GGGCAAAGGGATTCAGAAAGGGCCTGGCGCACTGAAGCCTCCATCTGCAGCCCAGCTTGCTGTGTCTCTTaGATGGTAGATATTTCCAAT +
Preference number: 4 (lower is better)
Translates to: GQRDSERAWRTEASICSPACCVS*MVDISN
Trigger: ATTGGAAATATCTACCATTCAAGAGACACAGCAAGC...TGGGCTGCAGATGGAGGCTTCAGTGCGCCAGGCCCTTTCTGAATCCCTTTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp AGAAATGATTCTCACACGAAGCCTCCTTTCAACCCCAACAGTCTGCTTGATGGTGCCCCTTCCCCAACCTaGCGACTGCACACGTTCAGA +
Preference number: 4 (lower is better)
Translates to: RNDSHTKPPFNPNSLLDGAPSPT*RLHTFR
Trigger: TCTGAACGTGTGCAGTCGGCAGGTTGGGGAAGGGGC...ACCATCAAGCAGACTGTTGGGGTTGAAAGGAGGCTTCGTGTGAGAATCATTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp GCCTGGGAACAAGGTGACAAGAGCCCGTCACAGGAAGGTGGGCCTCTGACTACTTTTTTCACTGTTAAGTaGGCTGTCTCTCTAGGCCTT +
Preference number: 4 (lower is better)
Translates to: AWEQGDKSPSQEGGPLTTFFTVK*AVSLGL
Trigger: AAGGCCTAGAGAGACAGCGCACTTAACAGTGAAAAA...AGTAGTCAGAGGCCCACCTTCCTGTGACGGGCTCTTGTCACCTTGTTCCCAGGC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp AGTGACTCTTGTCCTAGTGGAAACTGTGCCCCAGATTTAGAAAGAGTATTGGTCGAAGCTGCCTTGCTCTaGAGCGCTCTGAGTGACGGC +
Preference number: 4 (lower is better)
Translates to: SDSCPSGNCAPDLERVLVEAALL*SALSDG
Trigger: GCCGTCACTCAGAGCGCTCCAGAGCAAGGCAGCTTC...GACCAATACTCTTTCTAAATCTGGGGCACAGTTTCCACTAGGACAAGAGTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp AAGCAAATCTACTCCAGTCTTTCTCTCCCTGCTCCCTCAACTATCCCAGGACAAATGGTGGCAAAGAACTaGGGGTGCCCTTCATGCCTC +
Preference number: 4 (lower is better)
Translates to: KQIYSSLSLPAPSTIPGQMVAKN*GCPSCL
Trigger: GAGGCATGAAGGGCACCCCCAGTTCTTTGCCACCAT...TTGTCCTGGGATAGTTGAGGGAGCAGGGAGAGAAAGACTGGAGTAGATTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp TTAACCCAGTTGTTGGGGGAAGGGTGTTGTGTTTCAGGATCAGTTATTTTTGGTGTGAAGCAGTCGGCCTaGGTGGGGGTCCCAATCAGC +
Preference number: 4 (lower is better)
Translates to: LTQLLGEGCCVSGSVIFGVKQSA*VGVPIS
Trigger: GCTGATTGGGACCCCCACCCAGGCCGACTGCTTCAC...ACCAAAAATAACTGATCCTGAAACACAACACCCTTCCCCCAACAACTGGGTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp GTCTTACTTCAAGAACACCAAGTTTGCAGTCAGTTGATCTGGGTTTTGGTTGTGCCTAGGGAGGCTGTGTaGGGAGCATCCGTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: VLLQEHQVCSQLIWVLVVPREAV*GASVAP
Trigger: AGGAGCCACGGATGCTCCCCACACAGCCTCCCTAGG...CACAACCAAAACCCAGATCAACTGACTGCAAACTTGGTGTTCTTGAAGTAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp AAGCAAATCTACTCCAGTCTTTCTCTCCCTGCTCCCTCAACTATCCCAGGACAAGGCCTCCCAAAGTCCTaGGATTATGGACGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: KQIYSSLSLPAPSTIPGQGLPKS*DYGREP
Trigger: TGGCTCACGTCCATAATCCCAGGACTTTGGGAGGCC...TTGTCCTGGGATAGTTGAGGGAGCAGGGAGAGAAAGACTGGAGTAGATTTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 72 bp AAGGAGAAGAATAAAAAGGAGTCTGGAGTCCTGGTATaGGGAGGTCCCAGGCGTTTCCTAGGGAGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: KEKNKKESGVLV*GGPRRFLGRLC
Trigger: ACACAGCCTCCCTAGGAAACGCCTGGGACCTCCCAATACCAGGACTCCAGACTCCTTTTTATTCTTCTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 72 bp GTGTCATTCATACTGCAACAGGTGCTGAATACATACTaGAGCCGTGGTCACGTCTGCGTGCTGAATGGGACG +
Preference number: 4 (lower is better)
Translates to: VSFILQQVLNTY*SRGHVCVLNGT
Trigger: CGTCCCATTCAGCACGCAGACGTGACCACGGCTCAAGTATGTATTCAGCACCTGTTGCAGTATGAATGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 72 bp TGGGTCCATATGTTCATAGAAATGACATGGTTGCTGTaGGTCAGAAGCCATACGTACCCGGTCCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: WVHMFIEMTWLL*VRSHTYPVPGP
Trigger: TGGGCCTGGGACCGGGTACGTATGGCTTCTGACCAACAGCAACCATGTCATTTCTATGAACATATGGACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 72 bp GTTCGTGTTTCCCCAACAATTTGCTGTTCCGCTGGCTaGGCTGTCATTTATGCCCTTGTCAGTACGGCCTTC +
Preference number: 4 (lower is better)
Translates to: VRVSPTICCSAG*AVIYALVSTAF
Trigger: GAAGGCCGTACTGACAAGGGCATAAATGACAGCCAAGCCAGCGGAACAGCAAATTGTTGGGGAAACACGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp TACATACTTGAGCCGTGGTCACGTCTGCGTGCTGAATGGGACGGTAGGAGCATTTGTGGTCTAACCACCTaGTGTGTGACCTTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: YILEPWSRLRAEWDGRSICGLTT*CVTLKR
Trigger: TCTTTTCAAGGTCACACATCAGGTGGTTAGACCACA...AATGCTCCTACCGTCCCATTCAGCACGCAGACGTGACCACGGCTCAAGTATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp AAGCAAATCTACTCCAGTCTTTCTCTCCCTGCTCCCTCAACTATCCCAGGACAAAATCTTCGTGTGGCCTaGCCTCCATTTCGGCGTCAA +
Preference number: 4 (lower is better)
Translates to: KQIYSSLSLPAPSTIPGQNLRVA*PPFRRQ
Trigger: TTGACGCCGAAATGGAGGTCAGGCCACACGAAGATT...TTGTCCTGGGATAGTTGAGGGAGCAGGGAGAGAAAGACTGGAGTAGATTTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp TACATACTTGAGCCGTGGTCACGTCTGCGTGCTGAATGGGACGGTAGGAGCATTGCCCTGTTCTTCATGTaGCATTCCTTGGCTCATTAT +
Preference number: 4 (lower is better)
Translates to: YILEPWSRLRAEWDGRSIALFFM*HSLAHY
Trigger: ATAATGAGCCAAGGAATGTCACATGAAGAACAGGGC...AATGCTCCTACCGTCCCATTCAGCACGCAGACGTGACCACGGCTCAAGTATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp TCCAGTGACTCTTGTCCTAGTGGAAACTGTGCCCCAGATTTAGAAAGAGTATTGTGGGGGTGCCCTTCATaGCTCTCCTGTTTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: SSDSCPSGNCAPDLERVLWGCPS*LSCFLS
Trigger: GCTGAGGAAACAGGAGAGGCATGAAGGGCACCCCCA...CAATACTCTTTCTAAATCTGGGGCACAGTTTCCACTAGGACAAGAGTCACTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp TATGAAAGCACTAAAAGGCCTCTATGCCATTCACACTTTATGACTCGGTCCTTCAGTCACTTGGATGCCTaGCAGGACCAAGCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: YESTKRPLCHSHFMTRSFSHLDA*QDQAEG
Trigger: CCCCTCGGCTTGGTCCTGGCAGGCATCCAAGTGACT...GAAGGACCGAGTCATAAAGTGTGAATGGCATAGAGGCCTTTTAGTGCTTTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp AGAAATGATTCTCACACGAAGCCTCCTTTCAACCCCAACAGTCTGCTTGATGGTGAAGGGGATTGGGGATaGAGTGAGGAGGAAGACAGC +
Preference number: 4 (lower is better)
Translates to: RNDSHTKPPFNPNSLLDGEGDWG*SEEEDS
Trigger: GCTGTCTTCCTCCTCACTGCATCCCCAATCCCCTTC...ACCATCAAGCAGACTGTTGGGGTTGAAAGGAGGCTTCGTGTGAGAATCATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp TATGAAAGCACTAAAAGGCCTCTATGCCATTCACACTTTATGACTCGGTCCTTCAGGCGGCCTTCCCACTaGCAGGAGAACAAGGGACAC +
Preference number: 4 (lower is better)
Translates to: YESTKRPLCHSHFMTRSFRRPSH*QENKGH
Trigger: GTGTCCCTTGTTCTCCTGCCAGTGGGAAGGCCGCCT...GAAGGACCGAGTCATAAAGTGTGAATGGCATAGAGGCCTTTTAGTGCTTTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp TTAAAGACAATCTTCGTGTGGCCTGACCTCCATTTCGGCGTCAACCATGTATGTCACTTGAGGCGCCGATaGTTTCTGTTGAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LKTIFVWPDLHFGVNHVCHLRRR*FLLSSR
Trigger: CCTGGAGCTCAACAGAAACCATCGGCGCCTCAAGTG...ACATACATGGTTGACGCCGAAATGGAGGTCAGGCCACACGAAGATTGTCTTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp TATGAAAGCACTAAAAGGCCTCTATGCCATTCACACTTTATGACTCGGTCCTTCGATCCATCTCTGAGCTaGGCCCCTTCCCCAACCTGC +
Preference number: 4 (lower is better)
Translates to: YESTKRPLCHSHFMTRSFDPSLS*APSPTC
Trigger: GCAGGTTGGGGAAGGGGCCCAGCTCAGAGATGGATC...GAAGGACCGAGTCATAAAGTGTGAATGGCATAGAGGCCTTTTAGTGCTTTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp AAGCAAATCTACTCCAGTCTTTCTCTCCCTGCTCCCTCAACTATCCCAGGACAAGCTGTTCCGCTGGCTTaGCTGTCATTTATGCCCTTG +
Preference number: 4 (lower is better)
Translates to: KQIYSSLSLPAPSTIPGQAVPLA*LSFMPL
Trigger: CAAGGGCATAAATGACAGCCAAGCCAGCGGAACAGC...TTGTCCTGGGATAGTTGAGGGAGCAGGGAGAGAAAGACTGGAGTAGATTTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp TGCTGTTGGTCAGAAGCCATACGTACCCGGTCCCAGGCCCAGCTCTGCCATTTGATAATGCATCTTATGTaGTGTTTGACACCACTGCTT +
Preference number: 4 (lower is better)
Translates to: CCWSEAIRTRSQAQLCHLIMHLM*CLTPLL
Trigger: AAGCAGTGGTGTCAAACACCACATAAGATGCATTAT...CAAATGGCAGAGCTGGGCCTGGGACCGGGTACGTATGGCTTCTGACCAACAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 72 bp CAGGTCAGAGATCCTGGGTGCCACCCTCTGAGTTCTTaGCATTTGATGATGAGTCCTGGTTCTGCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: QVRDPGCHPLSS*HLMMSPGSAFC
Trigger: GCAAAAAGCAGAACCAGGACTCATCATCAAATGCAAAGAACTCAGAGGGTGGCACCCAGGATCTCTGACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 72 bp GAGCCTTGGGTCCATATGTTCATAGAAATGACATGGTaGCTGTTGGTCAGAAGCCATACGTACCCGGTCCCA +
Preference number: 4 (lower is better)
Translates to: EPWVHMFIEMTW*LLVRSHTYPVP
Trigger: TGGGACCGGGTACGTATGGCTTCTGACCAACAGCAACCATGTCATTTCTATGAACATATGGACCCAAGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp AGAAATGATTCTCACACGAAGCCTCCTTTCAACCCCAACAGTCTGCTTGATGGTGGATGGTCTGAAATGTaGTCCATCTCTGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RNDSHTKPPFNPNSLLDGGWSEM*SISELG
Trigger: GCCCAGCTCAGAGATGGATCACATTTCAGACCATCC...ACCATCAAGCAGACTGTTGGGGTTGAAAGGAGGCTTCGTGTGAGAATCATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp TACATACTTGAGCCGTGGTCACGTCTGCGTGCTGAATGGGACGGTAGGAGCATTGTTCTGCTTTTTGCATaGTATGAAAGAACTGCACCC +
Preference number: 4 (lower is better)
Translates to: YILEPWSRLRAEWDGRSIVLLFA*YERTAP
Trigger: GGGTGCAGTTCTTTCATATCATGCAAAAAGCAGAAC...AATGCTCCTACCGTCCCATTCAGCACGCAGACGTGACCACGGCTCAAGTATGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp ACTGTGAAGCTCAAATACAAACTGCTGGTACCATTTCCTATTCCCAATTCTTGGTGGGGATGGGGTGCCTaGCTTCTGCAGTGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: TVKLKYKLLVPFPIPNSWWGWGA*LLQCLE
Trigger: CTCCAGACACTGCAGAAGTCAGGCACCCCATCCCCA...CCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCTTCACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp GTCTTACTTCAAGAACACCAAGTTTGCAGTCAGTTGATCTGGGTTTTGGTTGTGCCCTGGCAGGGCATCTaGGAGCTCAAAGAATGCGCA +
Preference number: 4 (lower is better)
Translates to: VLLQEHQVCSQLIWVLVVPWQGI*ELKECA
Trigger: TGCGCATTCTTTGAGCTCTCAGATGCCCTGCCAGGG...CACAACCAAAACCCAGATCAACTGACTGCAAACTTGGTGTTCTTGAAGTAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp TTAAAGACAATCTTCGTGTGGCCTGACCTCCATTTCGGCGTCAACCATGTATGTGTCAGAGATCCTGGGTaGCACCCTCTGAGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: LKTIFVWPDLHFGVNHVCVRDPG*HPLSSL
Trigger: CAAAGAACTCAGAGGGTGGCACCCAGGATCTCTGAC...ACATACATGGTTGACGCCGAAATGGAGGTCAGGCCACACGAAGATTGTCTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp TTAACCCAGTTGTTGGGGGAAGGGTGTTGTGTTTCAGGATCAGTTATTTTTGGTGATCCCAGCGTTCTGTaGAGGGACTCCTGGGACTCT +
Preference number: 4 (lower is better)
Translates to: LTQLLGEGCCVSGSVIFGDPSVL*RDSWDS
Trigger: AGAGTCCCAGGAGTCCCTGCACAGAACGCTGGGATC...ACCAAAAATAACTGATCCTGAAACACAACACCCTTCCCCCAACAACTGGGTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp AGTCTTACTTCAAGAACACCAAGTTTGCAGTCAGTTGATCTGGGTTTTGGTTGTGAAGCTGTGAGTCCTTaGGCCCTGGAAGGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: SLTSRTPSLQSVDLGFGCEAVSP*ALEGAQ
Trigger: CTGCGCTCCTTCCAGGGCCCAAGGACTCACAGCTTC...ACAACCAAAACCCAGATCAACTGACTGCAAACTTGGTGTTCTTGAAGTAAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp TTAAAGACAATCTTCGTGTGGCCTGACCTCCATTTCGGCGTCAACCATGTATGTACCAACAGAAAGTGGTaGCCAAGGCAGGAGTGCATG +
Preference number: 4 (lower is better)
Translates to: LKTIFVWPDLHFGVNHVCTNRKW*PRQECM
Trigger: CATGCACTCCTGCCTTGGCCACCACTTTCTGTTGGT...ACATACATGGTTGACGCCGAAATGGAGGTCAGGCCACACGAAGATTGTCTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp TCCAGTGACTCTTGTCCTAGTGGAAACTGTGCCCCAGATTTAGAAAGAGTATTGAGCACCAACAGAAAGTaGTGGCCAAGGCAGGAGTGC +
Preference number: 4 (lower is better)
Translates to: SSDSCPSGNCAPDLERVLSTNRK*WPRQEC
Trigger: GCACTCCTGCCTTGGCCACCACTTTCTGTTGGTGCT...CAATACTCTTTCTAAATCTGGGGCACAGTTTCCACTAGGACAAGAGTCACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp AGAAATGATTCTCACACGAAGCCTCCTTTCAACCCCAACAGTCTGCTTGATGGTCAATCAGCATCATGGTaGCAAAGAACTGGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: RNDSHTKPPFNPNSLLDGQSASW*QRTGGA
Trigger: GGCACCCCCAGTTCTTTGCCACCATGATGCTGATTG...ACCATCAAGCAGACTGTTGGGGTTGAAAGGAGGCTTCGTGTGAGAATCATTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp ACTGTGAAGCTCAAATACAAACTGCTGGTACCATTTCCTATTCCCAATTCTTGGAGCAGTCGGCCTGGGTaGGGGTCCCAATCAGCATCA +
Preference number: 4 (lower is better)
Translates to: TVKLKYKLLVPFPIPNSWSSRPG*GSQSAS
Trigger: TGATGCTGATTGGGACCCCCACCCAGGCCGACTGCT...CCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCTTCACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp TTAACCCAGTTGTTGGGGGAAGGGTGTTGTGTTTCAGGATCAGTTATTTTTGGTCTCCCTTCTGGTGCGTaGGGGTGTAAGTTGGCACCA +
Preference number: 4 (lower is better)
Translates to: LTQLLGEGCCVSGSVIFGLPSGA*GCKLAP
Trigger: TGGTGCCAACTTACACCCCCACGCACCAGAAGGGAG...ACCAAAAATAACTGATCCTGAAACACAACACCCTTCCCCCAACAACTGGGTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp TACATACTTGAGCCGTGGTCACGTCTGCGTGCTGAATGGGACGGTAGGAGCATTCCAGTTCTTCACATATaGATATGGAGAGGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: YILEPWSRLRAEWDGRSIPVLHI*IWRGLL
Trigger: CAAAAGGCCTCTCCATATCCATATGTGAAGAACTGG...AATGCTCCTACCGTCCCATTCAGCACGCAGACGTGACCACGGCTCAAGTATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 72 bp TCTCTTCTCCAGAAGAGTTCGTGTTTCCCCAACAATTaGCTGTTCCGCTGGCTTGGCTGTCATTTATGCCCT +
Preference number: 4 (lower is better)
Translates to: SLLQKSSCFPNN*LFRWLGCHLCP
Trigger: AGGGCATAAATGACAGCCAAGCCAGCGGAACAGCAAATTGTTGGGGAAACACGAACTCTTCTGGAGAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp ACTGTGAAGCTCAAATACAAACTGCTGGTACCATTTCCTATTCCCAATTCTTGGGGACCTCTGTCGCGGTaGTGGCAATCCCAATGGCAA +
Preference number: 4 (lower is better)
Translates to: TVKLKYKLLVPFPIPNSWGPLSR*WQSQWQ
Trigger: TTGCCATTGGGATTGCCATCACCGCGACAGAGGTCC...CCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCTTCACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp AGTCTTACTTCAAGAACACCAAGTTTGCAGTCAGTTGATCTGGGTTTTGGTTGTCCTGGGACTCTAAGGTaGGAAACCTGGGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SLTSRTPSLQSVDLGFGCPGTLR*ETWVWA
Trigger: TGCCCACACCCAGGTTTCTCACCTTAGAGTCCCAGG...ACAACCAAAACCCAGATCAACTGACTGCAAACTTGGTGTTCTTGAAGTAAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp TACATACTTGAGCCGTGGTCACGTCTGCGTGCTGAATGGGACGGTAGGAGCATTCTAATTTCCATGGTATaGATACTTCCACCATGGCTA +
Preference number: 4 (lower is better)
Translates to: YILEPWSRLRAEWDGRSILISMV*ILPPWL
Trigger: TAGCCATGGTGGAAGTATTCATACCATGGAAATTAG...AATGCTCCTACCGTCCCATTCAGCACGCAGACGTGACCACGGCTCAAGTATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp TATGAAAGCACTAAAAGGCCTCTATGCCATTCACACTTTATGACTCGGTCCTTCGACACGATCTCCTCATaGCCGGCTAGCTCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: YESTKRPLCHSHFMTRSFDTISS*PASSAL
Trigger: CAAAGCTGAGCTAGCCGGGCATGAGGAGATCGTGTC...GAAGGACCGAGTCATAAAGTGTGAATGGCATAGAGGCCTTTTAGTGCTTTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp TATGAAAGCACTAAAAGGCCTCTATGCCATTCACACTTTATGACTCGGTCCTTCACGATCTCGGCTCCCTaGAGGATGTCAACCCTATGG +
Preference number: 4 (lower is better)
Translates to: YESTKRPLCHSHFMTRSFTISAP*RMSTLW
Trigger: CCATAGGGTTGACATCCTCCAGGGAGCCGAGATCGT...GAAGGACCGAGTCATAAAGTGTGAATGGCATAGAGGCCTTTTAGTGCTTTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp TATGAAAGCACTAAAAGGCCTCTATGCCATTCACACTTTATGACTCGGTCCTTCGAAGACGGCACAGCCTaGGAACAAGGTGACAAGAGC +
Preference number: 4 (lower is better)
Translates to: YESTKRPLCHSHFMTRSFEDGTA*EQGDKS
Trigger: GCTCTTGTCACCTTGTTCCCAGGCTGTGCCGTCTTC...GAAGGACCGAGTCATAAAGTGTGAATGGCATAGAGGCCTTTTAGTGCTTTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp CTTGAGCCGTGGTCACGTCTGCGTGCTGAATGGGACGGTAGGAGCATTTTAGAAGTGCCCTCTCAGAGATaGGAGATTAATTTTATGTTC +
Preference number: 4 (lower is better)
Translates to: LEPWSRLRAEWDGRSILEVPSQR*EINFMF
Trigger: GAACATAAAATTAATCTCCCATCTCTGAGAGGGCAC...TTCTAAAATGCTCCTACCGTCCCATTCAGCACGCAGACGTGACCACGGCTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp TACATACTTGAGCCGTGGTCACGTCTGCGTGCTGAATGGGACGGTAGGAGCATTTTCATAGAAATGACATaGTTGCTGTTGGTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: YILEPWSRLRAEWDGRSIFIEMT*LLLVRS
Trigger: GCTTCTGACCAACAGCAACCATGTCATTTCTATGAA...AATGCTCCTACCGTCCCATTCAGCACGCAGACGTGACCACGGCTCAAGTATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp TCCAGTGACTCTTGTCCTAGTGGAAACTGTGCCCCAGATTTAGAAAGAGTATTGCAAAGCCTAACTCTTTaGGGTCCCACCCATGATCCC +
Preference number: 4 (lower is better)
Translates to: SSDSCPSGNCAPDLERVLQSLTL*GPTHDP
Trigger: GGGATCATGGGTGGGACCCCAAAGAGTTAGGCTTTG...CAATACTCTTTCTAAATCTGGGGCACAGTTTCCACTAGGACAAGAGTCACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp ACTGTGAAGCTCAAATACAAACTGCTGGTACCATTTCCTATTCCCAATTCTTGGTGCGACTGCAGCATCTaGCATGTGCCTCCATCTGTG +
Preference number: 4 (lower is better)
Translates to: TVKLKYKLLVPFPIPNSWCDCSI*HVPPSV
Trigger: CACAGATGGAGGCACATGTCAGATGCTGCAGTCGCA...CCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCTTCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp AAGCAAATCTACTCCAGTCTTTCTCTCCCTGCTCCCTCAACTATCCCAGGACAAGAGGTTTTTGTTTGTTaGTCTGGAGCACCTGTGATG +
Preference number: 4 (lower is better)
Translates to: KQIYSSLSLPAPSTIPGQEVFVC*SGAPVM
Trigger: CATCACAGGTGCTCCAGATCAACAAACAAAAACCTC...TTGTCCTGGGATAGTTGAGGGAGCAGGGAGAGAAAGACTGGAGTAGATTTGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp AGAAATGATTCTCACACGAAGCCTCCTTTCAACCCCAACAGTCTGCTTGATGGTGCAGTGAAAATAACCTaGAGTCATTCCCAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: RNDSHTKPPFNPNSLLDGAVKIT*SHSQCG
Trigger: GCCACACTGGGAATGACTTCAGGTTATTTTCACTGC...ACCATCAAGCAGACTGTTGGGGTTGAAAGGAGGCTTCGTGTGAGAATCATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp AGTGACTCTTGTCCTAGTGGAAACTGTGCCCCAGATTTAGAAAGAGTATTGGTCGCCATTCACACTTTATaGCTCGGTCCTTCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: SDSCPSGNCAPDLERVLVAIHTL*LGPSEP
Trigger: AGGCTCAGAAGGACCGAGTCATAAAGTGTGAATGGC...GACCAATACTCTTTCTAAATCTGGGGCACAGTTTCCACTAGGACAAGAGTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp CCAACAAGGCAGGACAAACATCACACCAAGATCTTAAATTACAGGATGTTTACAAGAACAAGGGACACATaGACAGGCAGGGCGTCACCG +
Preference number: 4 (lower is better)
Translates to: PTRQDKHHTKILNYRMFTRTRDT*TGRASP
Trigger: CGGTGACGCCCTGCCTGTGCATGTGTCCCTTGTTCT...TGTAAACATCCTGTAATTTAAGATCTTGGTGTGATGTTTGTCCTGCCTTGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp ACTGTGAAGCTCAAATACAAACTGCTGGTACCATTTCCTATTCCCAATTCTTGGGTCAGAGAAGAGCTGTaGCAGCGAGGTGTTGAGGAC +
Preference number: 4 (lower is better)
Translates to: TVKLKYKLLVPFPIPNSWVREEL*QRGVED
Trigger: GTCCTCAACACCTCGCTGGCACAGCTCTTCTCTGAC...CCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCTTCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp TATGAAAGCACTAAAAGGCCTCTATGCCATTCACACTTTATGACTCGGTCCTTCTCCCAATGGCAAGGCTaGCGTTGTCAGAGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: YESTKRPLCHSHFMTRSFSQWQG*RCQRRA
Trigger: AGCTCTTCTCTGACAACGGCAGCCTTGCCATTGGGA...GAAGGACCGAGTCATAAAGTGTGAATGGCATAGAGGCCTTTTAGTGCTTTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp ACTGTGAAGCTCAAATACAAACTGCTGGTACCATTTCCTATTCCCAATTCTTGGTCTCTGAGGAGGGAGTaGCCTCTCAGAGATGGGAGA +
Preference number: 4 (lower is better)
Translates to: TVKLKYKLLVPFPIPNSWSLRRE*PLRDGR
Trigger: TCTCCCATCTCTGAGAGGGCACTCCCTCCTCAGAGA...CCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCTTCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp CCAACAAGGCAGGACAAACATCACACCAAGATCTTAAATTACAGGATGTTTACACTGGAGTCCTGGTATTaGGAGGTCCCAGGCGTTTCC +
Preference number: 4 (lower is better)
Translates to: PTRQDKHHTKILNYRMFTLESWY*EVPGVS
Trigger: GGAAACGCCTGGGACCTCCCAATACCAGGACTCCAG...TGTAAACATCCTGTAATTTAAGATCTTGGTGTGATGTTTGTCCTGCCTTGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp CCAACAAGGCAGGACAAACATCACACCAAGATCTTAAATTACAGGATGTTTACACCAGGTCAGAGATCCTaGGTGCCACCCTCTGAGTTC +
Preference number: 4 (lower is better)
Translates to: PTRQDKHHTKILNYRMFTPGQRS*VPPSEF
Trigger: GAACTCAGAGGGTGGCACCCAGGATCTCTGACCTGG...TGTAAACATCCTGTAATTTAAGATCTTGGTGTGATGTTTGTCCTGCCTTGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp TTAACCCAGTTGTTGGGGGAAGGGTGTTGTGTTTCAGGATCAGTTATTTTTGGTGGCCAAAGGCCCATTTaGCTGTCATGGGAATGTGCT +
Preference number: 4 (lower is better)
Translates to: LTQLLGEGCCVSGSVIFGGQRPI*LSWECA
Trigger: AGCACATTCCCATGACAGCCAAATGGGCCTTTGGCC...ACCAAAAATAACTGATCCTGAAACACAACACCCTTCCCCCAACAACTGGGTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp AGAAATGATTCTCACACGAAGCCTCCTTTCAACCCCAACAGTCTGCTTGATGGTACGGAGAGTAATGTCTaGTTGGCCAAAGGCCCATTT +
Preference number: 4 (lower is better)
Translates to: RNDSHTKPPFNPNSLLDGTESNV*LAKGPF
Trigger: AAATGGGCCTTTGGCCAACCAGACATTACTCTCCGT...ACCATCAAGCAGACTGTTGGGGTTGAAAGGAGGCTTCGTGTGAGAATCATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp CTTGAGCCGTGGTCACGTCTGCGTGCTGAATGGGACGGTAGGAGCATTTTAGAAGGGGAGCACCATAGATaGAAGATAATAATACATTTC +
Preference number: 4 (lower is better)
Translates to: LEPWSRLRAEWDGRSILEGEHHR*KIIIHF
Trigger: GAAATGTATTATTATCTTCCATCTATGGTGCTCCCC...TTCTAAAATGCTCCTACCGTCCCATTCAGCACGCAGACGTGACCACGGCTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 72 bp AGCACCTGTGATGCTACACAAATGCTTTCAAAGTGGTaGAGTCTCAAAAACCAGGAGAGGACCTGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: STCDATQMLSKW*SLKNQERTCGF
Trigger: GAAGCCACAGGTCCTCTCCTGGTTTTTGAGACTCAACCACTTTGAAAGCATTTGTGTAGCATCACAGGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp TTAAAGACAATCTTCGTGTGGCCTGACCTCCATTTCGGCGTCAACCATGTATGTGAAACCGGAGATGAATaGGATCTAATACAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: LKTIFVWPDLHFGVNHVCETGDE*DLIQPQ
Trigger: TTGGGGCTGTATTAGATCTCATTCATCTCCGGTTTC...ACATACATGGTTGACGCCGAAATGGAGGTCAGGCCACACGAAGATTGTCTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp TGTGAAGCTCAAATACAAACTGCTGGTACCATTTCCTATTCCCAATTCTTGGTTGGTTGTGTGTGGGGTTaGCGACACAGACAAGTTGCC +
Preference number: 4 (lower is better)
Translates to: CEAQIQTAGTISYSQFLVGCVWG*RHRQVA
Trigger: GGCAACTTGTCTGTGTCGTCAACCCCACACACAACC...AACCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCTTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp TTAACCCAGTTGTTGGGGGAAGGGTGTTGTGTTTCAGGATCAGTTATTTTTGGTCCTCTGGCAGATGCCTaGAGTTCAGATACTGGTAAC +
Preference number: 4 (lower is better)
Translates to: LTQLLGEGCCVSGSVIFGPLADA*SSDTGN
Trigger: GTTACCAGTATCTGAACTTCAGGCATCTGCCAGAGG...ACCAAAAATAACTGATCCTGAAACACAACACCCTTCCCCCAACAACTGGGTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp TATGAAAGCACTAAAAGGCCTCTATGCCATTCACACTTTATGACTCGGTCCTTCGTAGGCTATGGATTGTaGACAGGGTCCTTACTGGGT +
Preference number: 4 (lower is better)
Translates to: YESTKRPLCHSHFMTRSFVGYGL*TGSLLG
Trigger: ACCCAGTAAGGACCCTGTTCACAATCCATAGCCTAC...GAAGGACCGAGTCATAAAGTGTGAATGGCATAGAGGCCTTTTAGTGCTTTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp ACTGTGAAGCTCAAATACAAACTGCTGGTACCATTTCCTATTCCCAATTCTTGGCCCCAACCTGCCGACTaGACACGTTCAGATTTAGCT +
Preference number: 4 (lower is better)
Translates to: TVKLKYKLLVPFPIPNSWPQPAD*TRSDLA
Trigger: AGCTAAATCTGAACGTGTGCAGTCGGCAGGTTGGGG...CCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCTTCACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp ACTGTGAAGCTCAAATACAAACTGCTGGTACCATTTCCTATTCCCAATTCTTGGCAGTCTTTCTCTCCCTaGTCCCTCAACTATCCCAGG +
Preference number: 4 (lower is better)
Translates to: TVKLKYKLLVPFPIPNSWQSFSP*SLNYPR
Trigger: CCTGGGATAGTTGAGGGAGCAGGGAGAGAAAGACTG...CCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCTTCACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp CCAACAAGGCAGGACAAACATCACACCAAGATCTTAAATTACAGGATGTTTACATCCCCTCTCCCACCCTaGTGTGCTCATCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: PTRQDKHHTKILNYRMFTSPLPP*CAHQQC
Trigger: ACATTGCTGATGAGCACAGCAGGGTGGGAGAGGGGA...TGTAAACATCCTGTAATTTAAGATCTTGGTGTGATGTTTGTCCTGCCTTGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp TTAACCCAGTTGTTGGGGGAAGGGTGTTGTGTTTCAGGATCAGTTATTTTTGGTGTTTCCCCAACAATTTaGTGTTCCGCTGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LTQLLGEGCCVSGSVIFGVSPTI*CSAGLA
Trigger: AGCCAAGCCAGCGGAACAGCAAATTGTTGGGGAAAC...ACCAAAAATAACTGATCCTGAAACACAACACCCTTCCCCCAACAACTGGGTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp TTAAAGACAATCTTCGTGTGGCCTGACCTCCATTTCGGCGTCAACCATGTATGTTGCGCAGAGGAAATATaGATTTCCGTCACTGTGTCA +
Preference number: 4 (lower is better)
Translates to: LKTIFVWPDLHFGVNHVCCAEEI*ISVTVS
Trigger: TGACACAGTGACGGAAATCCATATTTCCTCTGCGCA...ACATACATGGTTGACGCCGAAATGGAGGTCAGGCCACACGAAGATTGTCTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp TATGAAAGCACTAAAAGGCCTCTATGCCATTCACACTTTATGACTCGGTCCTTCAAATCTTGTATCGACTaGCACCTCCCTTCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: YESTKRPLCHSHFMTRSFKSCID*HLPSGA
Trigger: CGCACCAGAAGGGAGGTGCCAGTCGATACAAGATTT...GAAGGACCGAGTCATAAAGTGTGAATGGCATAGAGGCCTTTTAGTGCTTTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 72 bp CCTCCTTTCAACCCCAACAGTCTGCTTGATGGTGTTTaGATCCTTTCAAAACTAGCGGAGAAAGGACTTGGA +
Preference number: 4 (lower is better)
Translates to: PPFNPNSLLDGV*ILSKLAEKGLG
Trigger: TCCAAGTCCTTTCTCCGCTAGTTTTGAAAGGATCAAAACACCATCAAGCAGACTGTTGGGGTTGAAAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 72 bp AGAGATCCTGGGTGCCACCCTCTGAGTTCTTTGCATTaGATGATGAGTCCTGGTTCTGCTTTTTGCATGATA +
Preference number: 4 (lower is better)
Translates to: RDPGCHPLSSLH*MMSPGSAFCMI
Trigger: TATCATGCAAAAAGCAGAACCAGGACTCATCATCAAATGCAAAGAACTCAGAGGGTGGCACCCAGGATCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp TTAACCCAGTTGTTGGGGGAAGGGTGTTGTGTTTCAGGATCAGTTATTTTTGGTCCCCAACAGTCTGCTTaGTGGTGTTTTGATCCTTTC +
Preference number: 4 (lower is better)
Translates to: LTQLLGEGCCVSGSVIFGPQQSA*WCFDPF
Trigger: GAAAGGATCAAAACACCATCAAGCAGACTGTTGGGG...ACCAAAAATAACTGATCCTGAAACACAACACCCTTCCCCCAACAACTGGGTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp TTAAAGACAATCTTCGTGTGGCCTGACCTCCATTTCGGCGTCAACCATGTATGTAAGAGAAACAAGAAATaGTTCTCACACGAAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LKTIFVWPDLHFGVNHVCKRNKK*FSHEAS
Trigger: GGAGGCTTCGTGTGAGAATCATTTCTTGTTTCTCTT...ACATACATGGTTGACGCCGAAATGGAGGTCAGGCCACACGAAGATTGTCTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp AGTGACTCTTGTCCTAGTGGAAACTGTGCCCCAGATTTAGAAAGAGTATTGGTCAGCTGGCAAGACTGCTaGATATTTCGGATCAGTCTT +
Preference number: 4 (lower is better)
Translates to: SDSCPSGNCAPDLERVLVSWQDC*IFRISL
Trigger: AAGACTGATCCGAAATATTCAGCAGTCTTGCCAGCT...GACCAATACTCTTTCTAAATCTGGGGCACAGTTTCCACTAGGACAAGAGTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp TTAAAGACAATCTTCGTGTGGCCTGACCTCCATTTCGGCGTCAACCATGTATGTTGGGATCAGAGTAACTaGTGCACTATTGACCTTGAA +
Preference number: 4 (lower is better)
Translates to: LKTIFVWPDLHFGVNHVCWDQSN*CTIDLE
Trigger: TTCAAGGTCAATAGTGCATCAGTTACTCTGATCCCA...ACATACATGGTTGACGCCGAAATGGAGGTCAGGCCACACGAAGATTGTCTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp CAATTCTTGGTTGTTAGTTTGCTCCTTCTTCTCCAGTTCTTCACATATGGATATACGACACAGACAAGTTaGCCGGCAGCGGAGAAAACC +
Preference number: 4 (lower is better)
Translates to: QFLVVSLLLLLQFFTYGYTTQTS*PAAEKT
Trigger: GGTTTTCTCCGCTGCCGGGCAACTTGTCTGTGTCGT...ATATCCATATGTGAAGAACTGGAGAAGAAGGAGCAAACTAACAACCAAGAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp TTAACCCAGTTGTTGGGGGAAGGGTGTTGTGTTTCAGGATCAGTTATTTTTGGTCTTGGCTGTCATTTATaGCCTTGTCAGTACGGCCTT +
Preference number: 4 (lower is better)
Translates to: LTQLLGEGCCVSGSVIFGLGCHL*PCQYGL
Trigger: AAGGCCGTACTGACAAGGGCATAAATGACAGCCAAG...ACCAAAAATAACTGATCCTGAAACACAACACCCTTCCCCCAACAACTGGGTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp CCAACAAGGCAGGACAAACATCACACCAAGATCTTAAATTACAGGATGTTTACATGTCCCTCAGCTTCATaGTTTACGGGGGTCCCACTT +
Preference number: 4 (lower is better)
Translates to: PTRQDKHHTKILNYRMFTCPSAS*FTGVPL
Trigger: AAGTGGGACCCCCGTAAAGCATGAAGCTGAGGGACA...TGTAAACATCCTGTAATTTAAGATCTTGGTGTGATGTTTGTCCTGCCTTGTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp ACTGTGAAGCTCAAATACAAACTGCTGGTACCATTTCCTATTCCCAATTCTTGGGTGGCTCAGGTAACTTaGCACAACCAGAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: TVKLKYKLLVPFPIPNSWVAQVT*HNQKAK
Trigger: CTTTGCCTTCTGGTTGTGCCAAGTTACCTGAGCCAC...CCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCTTCACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp AAGCAAATCTACTCCAGTCTTTCTCTCCCTGCTCCCTCAACTATCCCAGGACAATTCAATGGACTTAGCTaGAAGTTTCCAGTGACTCTT +
Preference number: 4 (lower is better)
Translates to: KQIYSSLSLPAPSTIPGQFNGLS*KFPVTL
Trigger: AAGAGTCACTGGAAACTTCCAGCTAAGTCCATTGAA...TTGTCCTGGGATAGTTGAGGGAGCAGGGAGAGAAAGACTGGAGTAGATTTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 72 bp TGGGGTTTACCAGGTACAGATTCATGCAGATACCAATaGTTAAAGACAATCTTCGTGTGGCCTGACCTCCAT +
Preference number: 4 (lower is better)
Translates to: WGLPGTDSCRYQ*LKTIFVWPDLH
Trigger: ATGGAGGTCAGGCCACACGAAGATTGTCTTTAACAATTGGTATCTGCATGAATCTGTACCTGGTAAACCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp CCAACAAGGCAGGACAAACATCACACCAAGATCTTAAATTACAGGATGTTTACAAGGAGACGCCACTCATaGTGCTATTTGCAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: PTRQDKHHTKILNYRMFTRRRHS*CYLQLN
Trigger: GTTCAGCTGCAAATAGCATCATGAGTGGCGTCTCCT...TGTAAACATCCTGTAATTTAAGATCTTGGTGTGATGTTTGTCCTGCCTTGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp CAATTCTTGGTTGTTAGTTTGCTCCTTCTTCTCCAGTTCTTCACATATGGATATTGGCCAAGGCAGGAGTaGATGATGATCCAATCAGCC +
Preference number: 4 (lower is better)
Translates to: QFLVVSLLLLLQFFTYGYWPRQE*MMIQSA
Trigger: GGCTGATTGGATCATCATGCACTCCTGCCTTGGCCA...ATATCCATATGTGAAGAACTGGAGAAGAAGGAGCAAACTAACAACCAAGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp CCAACAAGGCAGGACAAACATCACACCAAGATCTTAAATTACAGGATGTTTACAAAGCATCACAACTTTTaGGGGGTTGTTGGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: PTRQDKHHTKILNYRMFTKHHNF*GVVGPG
Trigger: TCCCGGACCAACAACCCCCCAAAAGTTGTGATGCTT...TGTAAACATCCTGTAATTTAAGATCTTGGTGTGATGTTTGTCCTGCCTTGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp CCAACAAGGCAGGACAAACATCACACCAAGATCTTAAATTACAGGATGTTTACACGTCTGCGTGCTGAATaGGACGGTAGGAGCATTTTA +
Preference number: 4 (lower is better)
Translates to: PTRQDKHHTKILNYRMFTRLRAE*DGRSIL
Trigger: TAAAATGCTCCTACCGTCCCATTCAGCACGCAGACG...TGTAAACATCCTGTAATTTAAGATCTTGGTGTGATGTTTGTCCTGCCTTGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp CCAACAAGGCAGGACAAACATCACACCAAGATCTTAAATTACAGGATGTTTACATACATACTTGAGCCGTaGTCACGTCTGCGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: PTRQDKHHTKILNYRMFTYILEP*SRLRAE
Trigger: TTCAGCACGCAGACGTGACCACGGCTCAAGTATGTA...TGTAAACATCCTGTAATTTAAGATCTTGGTGTGATGTTTGTCCTGCCTTGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp TATGAAAGCACTAAAAGGCCTCTATGCCATTCACACTTTATGACTCGGTCCTTCAATTTGCTGTTCCGCTaGCTTGGCTGTCATTTATGC +
Preference number: 4 (lower is better)
Translates to: YESTKRPLCHSHFMTRSFNLLFR*LGCHLC
Trigger: GCATAAATGACAGCCAAGCCAGCGGAACAGCAAATT...GAAGGACCGAGTCATAAAGTGTGAATGGCATAGAGGCCTTTTAGTGCTTTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp AGTGACTCTTGTCCTAGTGGAAACTGTGCCCCAGATTTAGAAAGAGTATTGGTCGCTGGTTTTGCTTTTTaGATTGGGATAGCCAATAGG +
Preference number: 4 (lower is better)
Translates to: SDSCPSGNCAPDLERVLVAGFAF*IGIANR
Trigger: CCTATTGGCTATCCCAATCCAAAAAGCAAAACCAGC...GACCAATACTCTTTCTAAATCTGGGGCACAGTTTCCACTAGGACAAGAGTCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp TGTGAAGCTCAAATACAAACTGCTGGTACCATTTCCTATTCCCAATTCTTGGTTGGTCTGGGTAGGCTATaGATTGTGAACAGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: CEAQIQTAGTISYSQFLVGLGRL*IVNRVL
Trigger: AAGGACCCTGTTCACAATCCATAGCCTACCCAGACC...AACCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCTTCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 72 bp ACTGAAACCACTGGGATCAGAGTAACTGATGCACTATaGACCTTGAAGATTCTGCCTGCTTCAATGGACTTA +
Preference number: 4 (lower is better)
Translates to: TETTGIRVTDAL*TLKILPASMDL
Trigger: TAAGTCCATTGAAGCAGGCAGAATCTTCAAGGTCAATAGTGCATCAGTTACTCTGATCCCAGTGGTTTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp GTCTTACTTCAAGAACACCAAGTTTGCAGTCAGTTGATCTGGGTTTTGGTTGTGTGCTTTCAAAGTGGTTaGGTCTCAAAAACCAGGAGA +
Preference number: 4 (lower is better)
Translates to: VLLQEHQVCSQLIWVLVVCFQSG*VSKTRR
Trigger: TCTCCTGGTTTTTGAGACTCAACCACTTTGAAAGCA...CACAACCAAAACCCAGATCAACTGACTGCAAACTTGGTGTTCTTGAAGTAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp CCAACAAGGCAGGACAAACATCACACCAAGATCTTAAATTACAGGATGTTTACAGATCTGGAGCACCTGTaGTGCTACACAAATGCTTTC +
Preference number: 4 (lower is better)
Translates to: PTRQDKHHTKILNYRMFTDLEHL*CYTNAF
Trigger: GAAAGCATTTGTGTAGCATCACAGGTGCTCCAGATC...TGTAAACATCCTGTAATTTAAGATCTTGGTGTGATGTTTGTCCTGCCTTGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp TGTGAAGCTCAAATACAAACTGCTGGTACCATTTCCTATTCCCAATTCTTGGTTGCCCTTCAGGAACTGTaGAGCTCAAATACAAACTGC +
Preference number: 4 (lower is better)
Translates to: CEAQIQTAGTISYSQFLVALQEL*SSNTNC
Trigger: GCAGTTTGTATTTGAGCTTCACAGTTCCTGAAGGGC...AACCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCTTCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp GTCTTACTTCAAGAACACCAAGTTTGCAGTCAGTTGATCTGGGTTTTGGTTGTGTTACTCCTTAGAGAGTaGGTCATTAACTCTTGCACC +
Preference number: 4 (lower is better)
Translates to: VLLQEHQVCSQLIWVLVVLLLRE*VINSCT
Trigger: GGTGCAAGAGTTAATGACTCACTCTCTAAGGAGTAA...CACAACCAAAACCCAGATCAACTGACTGCAAACTTGGTGTTCTTGAAGTAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp ACTGTGAAGCTCAAATACAAACTGCTGGTACCATTTCCTATTCCCAATTCTTGGCTTGAAGATTCTGCCTaGTTCAATGGACTTAGCTGG +
Preference number: 4 (lower is better)
Translates to: TVKLKYKLLVPFPIPNSWLEDSA*FNGLSW
Trigger: CCAGCTAAGTCCATTGAAGCAGGCAGAATCTTCAAG...CCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCTTCACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp TGTGAAGCTCAAATACAAACTGCTGGTACCATTTCCTATTCCCAATTCTTGGTTAGAGTAATGTCTGGTTaGCCAAAGGCCCATTTGGCT +
Preference number: 4 (lower is better)
Translates to: CEAQIQTAGTISYSQFLVRVMSG*PKAHLA
Trigger: AGCCAAATGGGCCTTTGGCCAACCAGACATTACTCT...AACCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCTTCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp ACTGTGAAGCTCAAATACAAACTGCTGGTACCATTTCCTATTCCCAATTCTTGGGGCACCAAAAGTGGCTaGAGAATTAACCCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: TVKLKYKLLVPFPIPNSWGTKSG*RINPVV
Trigger: AACAACTGGGTTAATTCTCCAGCCACTTTTGGTGCC...CCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCTTCACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 72 bp CCCACCCGTAACATGAATACAATAAAGAGCACCTGCTaGCTAAGGTTGTTATGGGGATTACATGATCTACTA +
Preference number: 4 (lower is better)
Translates to: PTRNMNTIKSTC*LRLLWGLHDLL
Trigger: TAGTAGATCATGTAATCCCCATAACAACCTTAGCAAGCAGGTGCTCTTTATTGTATTCATGTTACGGGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp CAATTCTTGGTTGTTAGTTTGCTCCTTCTTCTCCAGTTCTTCACATATGGATATGAAGTCTCGCTATATTaGCCAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: QFLVVSLLLLLQFFTYGYEVSLY*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGGCAATATAGCGAGACTTC...ATATCCATATGTGAAGAACTGGAGAAGAAGGAGCAAACTAACAACCAAGAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp TCCAGTGACTCTTGTCCTAGTGGAAACTGTGCCCCAGATTTAGAAAGAGTATTGCCAGGTACAGATTCATaGAGATACCAATTGTTAAAG +
Preference number: 4 (lower is better)
Translates to: SSDSCPSGNCAPDLERVLPGTDS*RYQLLK
Trigger: CTTTAACAATTGGTATCTGCATGAATCTGTACCTGG...CAATACTCTTTCTAAATCTGGGGCACAGTTTCCACTAGGACAAGAGTCACTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp CCAACAAGGCAGGACAAACATCACACCAAGATCTTAAATTACAGGATGTTTACAGGTCCTTCTGAGCCTTaGGTCCATATGTTCATAGAA +
Preference number: 4 (lower is better)
Translates to: PTRQDKHHTKILNYRMFTGPSEP*VHMFIE
Trigger: TTCTATGAACATATGGACCCAAGGCTCAGAAGGACC...TGTAAACATCCTGTAATTTAAGATCTTGGTGTGATGTTTGTCCTGCCTTGTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp AGAAATGATTCTCACACGAAGCCTCCTTTCAACCCCAACAGTCTGCTTGATGGTTGTGATGACCTGATTTaGGGGGAAATTAATGTTTAT +
Preference number: 4 (lower is better)
Translates to: RNDSHTKPPFNPNSLLDGCDDLI*GEINVY
Trigger: ATAAACATTAATTTCCCCCCAAATCAGGTCATCACA...ACCATCAAGCAGACTGTTGGGGTTGAAAGGAGGCTTCGTGTGAGAATCATTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp ACTGTGAAGCTCAAATACAAACTGCTGGTACCATTTCCTATTCCCAATTCTTGGAGCCCTAAGGCCCTGTaGATGTTAGTTATATTCTTA +
Preference number: 4 (lower is better)
Translates to: TVKLKYKLLVPFPIPNSWSPKAL*MLVIFL
Trigger: TAAGAATATAACTAACATTCACAGGGCCTTAGGGCT...CCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCTTCACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp ACTGTGAAGCTCAAATACAAACTGCTGGTACCATTTCCTATTCCCAATTCTTGGACAATAAAGAGCACCTaGTTGCTAAGGTTGTTATGG +
Preference number: 4 (lower is better)
Translates to: TVKLKYKLLVPFPIPNSWTIKST*LLRLLW
Trigger: CCATAACAACCTTAGCAAGCAGGTGCTCTTTATTGT...CCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCTTCACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp TTAACCCAGTTGTTGGGGGAAGGGTGTTGTGTTTCAGGATCAGTTATTTTTGGTTCAGGGCAAGTAAAATaGTTCTCAATTTCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: LTQLLGEGCCVSGSVIFGSGQVK*FSISFL
Trigger: GAGAAAGGAAATTGAGAAGCATTTTACTTGCCCTGA...ACCAAAAATAACTGATCCTGAAACACAACACCCTTCCCCCAACAACTGGGTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp AGTGACTCTTGTCCTAGTGGAAACTGTGCCCCAGATTTAGAAAGAGTATTGGTCTTGCTAAGGTTGTTATaGGGATTACATGATCTACTA +
Preference number: 4 (lower is better)
Translates to: SDSCPSGNCAPDLERVLVLLRLL*GLHDLL
Trigger: TAGTAGATCATGTAATCCCCATAACAACCTTAGCAA...GACCAATACTCTTTCTAAATCTGGGGCACAGTTTCCACTAGGACAAGAGTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp TTAACCCAGTTGTTGGGGGAAGGGTGTTGTGTTTCAGGATCAGTTATTTTTGGTTCATGTGACATTCCTTaGCTCATTATGTTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: LTQLLGEGCCVSGSVIFGSCDIP*LIMFSV
Trigger: GACAGAAAACATAATGAGCCAAGGAATGTCACATGA...ACCAAAAATAACTGATCCTGAAACACAACACCCTTCCCCCAACAACTGGGTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 72 bp ATATTTCGGATCAGTCTTACTTCAAGAACACCAAGTTaGCAGTCAGTTGATCTGGGTTTTGGTTGTGGTCTA +
Preference number: 4 (lower is better)
Translates to: IFRISLTSRTPS*QSVDLGFGCGL
Trigger: TAGACCACAACCAAAACCCAGATCAACTGACTGCAAACTTGGTGTTCTTGAAGTAAGACTGATCCGAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp AGTCTTACTTCAAGAACACCAAGTTTGCAGTCAGTTGATCTGGGTTTTGGTTGTCAGAAAAGACAAAGTTaGCTAAACATGCTGACTTTC +
Preference number: 4 (lower is better)
Translates to: SLTSRTPSLQSVDLGFGCQKRQS*LNMLTF
Trigger: GAAAGTCAGCATGTTTAGTCAACTTTGTCTTTTCTG...ACAACCAAAACCCAGATCAACTGACTGCAAACTTGGTGTTCTTGAAGTAAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp TGTGAAGCTCAAATACAAACTGCTGGTACCATTTCCTATTCCCAATTCTTGGTTAGCCCAATTTTTCCATaGAAGCCACCAAATAGAACT +
Preference number: 4 (lower is better)
Translates to: CEAQIQTAGTISYSQFLVSPIFP*KPPNRT
Trigger: AGTTCTATTTGGTGGCTTTCATGGAAAAATTGGGCT...AACCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCTTCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR TCA 90 bp AGTCTTACTTCAAGAACACCAAGTTTGCAGTCAGTTGATCTGGGTTTTGGTTGTGATGAAGTAGCAGTTTaGGTTTGTCCAAGTTATTGT +
Preference number: 4 (lower is better)
Translates to: SLTSRTPSLQSVDLGFGCDEVAV*VCPSYC
Trigger: ACAATAACTTGGACAAACTCAAACTGCTACTTCATC...ACAACCAAAACCCAGATCAACTGACTGCAAACTTGGTGTTCTTGAAGTAAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp CCAACAAGGCAGGACAAACATCACACCAAGATCTTAAATTACAGGATGTTTACAAGCTGGAAGATGCGGTaGAGCACATTATTATATAGT +
Preference number: 4 (lower is better)
Translates to: PTRQDKHHTKILNYRMFTSWKMR*STLLYS
Trigger: ACTATATAATAATGTGCTGCACCGCATCTTCCAGCT...TGTAAACATCCTGTAATTTAAGATCTTGGTGTGATGTTTGTCCTGCCTTGTTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp TGTGAAGCTCAAATACAAACTGCTGGTACCATTTCCTATTCCCAATTCTTGGTTCCTATTCCCAATTCTTaGTTGTTAGTTTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: CEAQIQTAGTISYSQFLVPIPNS*LLVCSF
Trigger: GAAGGAGCAAACTAACAACCAAGAATTGGGAATAGG...AACCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCTTCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 72 bp GGTACCATTTCCTATTCCCAATTCTTGGTTGTTAGTTaGCTCCTTCTTCTCCAGTTCTTCACATATGGATAT +
Preference number: 4 (lower is better)
Translates to: GTISYSQFLVVS*LLLLQFFTYGY
Trigger: ATATCCATATGTGAAGAACTGGAGAAGAAGGAGCAAACTAACAACCAAGAATTGGGAATAGGAAATGGTACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR GCA 90 bp TGTGAAGCTCAAATACAAACTGCTGGTACCATTTCCTATTCCCAATTCTTGGTTACTAAAAGGCCTCTATaGCATTCACACTTTATGACT +
Preference number: 4 (lower is better)
Translates to: CEAQIQTAGTISYSQFLVTKRPL*HSHFMT
Trigger: AGTCATAAAGTGTGAATGGCATAGAGGCCTTTTAGT...AACCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCTTCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CCA 90 bp CCAACAAGGCAGGACAAACATCACACCAAGATCTTAAATTACAGGATGTTTACACATTTCTTTAGGTTTTaGCCAGCATGTAAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: PTRQDKHHTKILNYRMFTHFFRF*PACKKE
Trigger: CTCTTTCTTACATGCTGGCCAAAACCTAAAGAAATG...TGTAAACATCCTGTAATTTAAGATCTTGGTGTGATGTTTGTCCTGCCTTGTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 72 bp TTCTTCAAATACACGAGAGACTTCTACAAGAAGATGTaGATGAATTGTTCTGACAACCAAATAAGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: FFKYTRDFYKKM*MNCSDNQIRES
Trigger: GCTTTCTCTTATTTGGTTGTCAGAACAATTCATCAACATCTTCTTGTAGAAGTCTCTCGTGTATTTGAAGAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
3UTR CAA 72 bp AACATGAATACAATAAAGAGCACCTGCTTGCTAAGGTaGTTATGGGGATTACATGATCTACTATATTCAAAG +
Preference number: 4 (lower is better)
Translates to: NMNTIKSTCLLR*LWGLHDLLYSK
Trigger: CTTTGAATATAGTAGATCATGTAATCCCCATAACAACCTTAGCAAGCAGGTGCTCTTTATTGTATTCATGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS TCA 90 bp AGGCAGGGCGTCACCGGGTTGGCGTGCAGCCCCGCCTCCTGGTGGTaGAGGTGGTGGGGGTGGGCGTGGTGGCGGAGGTGGTGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: RQGVTGLACSPASWW*RWWGWAWWRRWWWW
Trigger: CCACCACCACCACCTCCGCCACCACGCCCACCCCCACCACCTTCACCACCAGGAGGCGGGGCTGCACGCCAACCCGGTGACGCCCTGCCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS GCA 90 bp CCACCTCCAGGCGGCCTTCCCACTGGCAGGAGAACAAGGGACACATaGACAGGCAGGGCGTCACCGGGTTGGCGTGCAGCCCCGCCTCCT +
Preference number: 5 (lower is better)
Translates to: PPPGGLPTGRRTRDT*TGRASPGWRAAPPP
Trigger: AGGAGGCGGGGCTGCACGCCAACCCGGTGACGCCCTGCCTGTGCATGTGTCCCTTGTTCTCCTGCCAGTGGGAAGGCCGCCTGGAGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS CCA 90 bp GTGGCCAGGAAGACGATCTCGGCTCCCTGGAGGATGTCAACCCTATaGATCTGCCGCAGGTGGGGCACCACCACCTCCAGGCGGCCTTCC +
Preference number: 5 (lower is better)
Translates to: VARKTISAPWRMSTL*ICRRWGTTTSRRPS
Trigger: GGAAGGCCGCCTGGAGGTGGTGGTGCCCCACCTGCGGCAGATCCATAGGGTTGACATCCTCCAGGGAGCCGAGATCGTCTTCCTGGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS CCA 90 bp GCGGGGAGGTGCATGTCCGTGGCCAGGAAGACGATCTCGGCTCCCTaGAGGATGTCAACCCTATGGATCTGCCGCAGGTGGGGCACCACC +
Preference number: 5 (lower is better)
Translates to: AGRCMSVARKTISAP*RMSTLWICRRWGTT
Trigger: GGTGGTGCCCCACCTGCGGCAGATCCATAGGGTTGACATCCTCCAGGGAGCCGAGATCGTCTTCCTGGCCACGGACATGCACCTCCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp CACTTGGATGCCTGCCAGGACCAAGCCGAGGGGGTGAGGTGCAGGAACAGGGCAGGCGTGGCCTCCCACTaGAGGCGCCGATGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: HLDACQDQAEGVRCRNRAGVASH*RRRWFL
Trigger: CAGAAACCATCGGCGCCTCAAGTGGGAGGCCACGCC...TGCCCTGTTCCTGCACCTCACCCCCTCGGCTTGGTCCTGGCAGGCATCCAAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS GCA 90 bp AGGAAGACGATCTCGGCTCCCTGGAGGATGTCAACCCTATGGATCTaGCGCAGGTGGGGCACCACCACCTCCAGGCGGCCTTCCCACTGG +
Preference number: 5 (lower is better)
Translates to: RKTISAPWRMSTLWI*RRWGTTTSRRPSHW
Trigger: CCAGTGGGAAGGCCGCCTGGAGGTGGTGGTGCCCCACCTGCGGCAGATCCATAGGGTTGACATCCTCCAGGGAGCCGAGATCGTCTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS CCA 90 bp ATCTCGGCTCCCTGGAGGATGTCAACCCTATGGATCTGCCGCAGGTaGGGCACCACCACCTCCAGGCGGCCTTCCCACTGGCAGGAGAAC +
Preference number: 5 (lower is better)
Translates to: ISAPWRMSTLWICRR*GTTTSRRPSHWQEN
Trigger: GTTCTCCTGCCAGTGGGAAGGCCGCCTGGAGGTGGTGGTGCCCCACCTGCGGCAGATCCATAGGGTTGACATCCTCCAGGGAGCCGAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS GCA 90 bp CCAAGGCAGGAGTGCATGATGATCCAATCAGCCGGCGCGGGGAGGTaGATGTCCGTGGCCAGGAAGACGATCTCGGCTCCCTGGAGGATG +
Preference number: 5 (lower is better)
Translates to: PRQECMMIQSAGAGR*MSVARKTISAPWRM
Trigger: CATCCTCCAGGGAGCCGAGATCGTCTTCCTGGCCACGGACATGCACCTCCCCGCGCCGGCTGATTGGATCATCATGCACTCCTGCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp CACTTGGATGCCTGCCAGGACCAAGCCGAGGGGGTGAGGTGCAGGAACAGGGCAGACGACACAGACAAGTaGCCCGGCAGCGGAGAAAAC +
Preference number: 5 (lower is better)
Translates to: HLDACQDQAEGVRCRNRADDTDK*PGSGEN
Trigger: GTTTTCTCCGCTGCCGGGCAACTTGTCTGTGTCGTC...TGCCCTGTTCCTGCACCTCACCCCCTCGGCTTGGTCCTGGCAGGCATCCAAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS TCA 90 bp CTGTGTGGGGAGCATCCGTGGCTCCTGGCCTCACATTTCAGCTTCTaGGGGGAGGACCTCTGTCGCGGTGATGGCAATCCCAATGGCAAG +
Preference number: 5 (lower is better)
Translates to: LCGEHPWLLASHFSF*GEDLCRGDGNPNGK
Trigger: CTTGCCATTGGGATTGCCATCACCGCGACAGAGGTCCTCCCCTCAGAAGCTGAAATGTGAGGCCAGGAGCCACGGATGCTCCCCACACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS CCA 90 bp AGTCCTGGTATTGGGAGGTCCCAGGCGTTTCCTAGGGAGGCTGTGTaGGGAGCATCCGTGGCTCCTGGCCTCACATTTCAGCTTCTGAGG +
Preference number: 5 (lower is better)
Translates to: SPGIGRSQAFPREAV*GASVAPGLTFQLLR
Trigger: CCTCAGAAGCTGAAATGTGAGGCCAGGAGCCACGGATGCTCCCCACACAGCCTCCCTAGGAAACGCCTGGGACCTCCCAATACCAGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp GCCTGGGAACAAGGTGACAAGAGCCCGTCACAGGAAGGTGGGCCTCTGACTACTCGGCCTTCCAGGGCCTaGCTTCTCCTTCCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: AWEQGDKSPSQEGGPLTTRPSRA*LLLPKS
Trigger: GGACTTTGGAAGGAGAAGCAAGGCCCTGGAAGGCCG...AGTAGTCAGAGGCCCACCTTCCTGTGACGGGCTCTTGTCACCTTGTTCCCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS TCA 90 bp AGAGATGGTGAGGGTGGAAGCTGCCTTGCTCTGGAGCGCTCTGAGTaGCGGCGCGCCGACTGGACACATACTTTAGGTTGTGTGTGGGGT +
Preference number: 5 (lower is better)
Translates to: RDGEGGSCLALERSE*RRADWTHTLGCVWG
Trigger: ACCCCACACACAACCTAAAGTATGTGTCCAGTCGGCGCGCCGTCACTCAGAGCGCTCCAGAGCAAGGCAGCTTCCACCCTCACCATCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS GCA 90 bp TCCTGTTTCCTCAGCACCAACAGAAAGTGGTGGCCAAGGCAGGAGTaGATGATGATCCAATCAGCCGGCGCGGGGAGGTGCATGTCCGTG +
Preference number: 5 (lower is better)
Translates to: SCFLSTNRKWWPRQE*MMIQSAGAGRCMSV
Trigger: CACGGACATGCACCTCCCCGCGCCGGCTGATTGGATCATCATGCACTCCTGCCTTGGCCACCACTTTCTGTTGGTGCTGAGGAAACAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS GCA 90 bp GATGGCAATCCCAATGGCAAGGCTGCCGTTGTCAGAGAAGAGCTGTaGCAGCGAGGTGTTGAGGACGAGGCAGTCCCCGTCCGTAATCAC +
Preference number: 5 (lower is better)
Translates to: DGNPNGKAAVVREEL*QRGVEDEAVPVRNH
Trigger: GTGATTACGGACGGGGACTGCCTCGTCCTCAACACCTCGCTGGCACAGCTCTTCTCTGACAACGGCAGCCTTGCCATTGGGATTGCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS CCA 90 bp TGCCCTTCATGCCTCTCCTGTTTCCTCAGCACCAACAGAAAGTGGTaGCCAAGGCAGGAGTGCATGATGATCCAATCAGCCGGCGCGGGG +
Preference number: 5 (lower is better)
Translates to: CPSCLSCFLSTNRKW*PRQECMMIQSAGAG
Trigger: CCCCGCGCCGGCTGATTGGATCATCATGCACTCCTGCCTTGGCCACCACTTTCTGTTGGTGCTGAGGAAACAGGAGAGGCATGAAGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS CCA 90 bp TCGGCCTGGGTGGGGGTCCCAATCAGCATCATGGTGGCAAAGAACTaGGGGTGCCCTTCATGCCTCTCCTGTTTCCTCAGCACCAACAGA +
Preference number: 5 (lower is better)
Translates to: SAWVGVPISIMVAKN*GCPSCLSCFLSTNR
Trigger: TCTGTTGGTGCTGAGGAAACAGGAGAGGCATGAAGGGCACCCCCAGTTCTTTGCCACCATGATGCTGATTGGGACCCCCACCCAGGCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp GCCTGGGAACAAGGTGACAAGAGCCCGTCACAGGAAGGTGGGCCTCTGACTACTTCTGGAGTCCTGGTATaGGGAGGTCCCAGGCGTTTC +
Preference number: 5 (lower is better)
Translates to: AWEQGDKSPSQEGGPLTTSGVLV*GGPRRF
Trigger: GAAACGCCTGGGACCTCCCAATACCAGGACTCCAGA...AGTAGTCAGAGGCCCACCTTCCTGTGACGGGCTCTTGTCACCTTGTTCCCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS TCA 90 bp CCTGGCCTCACATTTCAGCTTCTGAGGGGAGGACCTCTGTCGCGGTaGTGGCAATCCCAATGGCAAGGCTGCCGTTGTCAGAGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: PGLTFQLLRGGPLSR*WQSQWQGCRCQRRA
Trigger: AGCTCTTCTCTGACAACGGCAGCCTTGCCATTGGGATTGCCATCACCGCGACAGAGGTCCTCCCCTCAGAAGCTGAAATGTGAGGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp GTCCGGGGAGAAAGCAGAGGGTGCTCTGTGGCAGAAAATGCTCTTGAAGCTGCTAGGGTGGAAGCTGCCTaGCTCTGGAGCGCTCTGAGT +
Preference number: 5 (lower is better)
Translates to: VRGESRGCSVAENALEAARVEAA*LWSALS
Trigger: ACTCAGAGCGCTCCAGAGCAAGGCAGCTTCCACCCT...AGCAGCTTCAAGAGCATTTTCTGCCACAGAGCACCCTCTGCTTTCTCCCCGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp TCCAGTGACTCTTGTCCTAGTGGAAACTGTGCCCCAGATTTAGAAAGAGTATTGCAGGGCGTCACCGGGTaGGCGTGCAGCCCCGCCTCC +
Preference number: 5 (lower is better)
Translates to: SSDSCPSGNCAPDLERVLQGVTG*ACSPAS
Trigger: GGAGGCGGGGCTGCACGCCAACCCGGTGACGCCCTG...CAATACTCTTTCTAAATCTGGGGCACAGTTTCCACTAGGACAAGAGTCACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS GCA 90 bp TGGGTGGGGGTCCCAATCAGCATCATGGTGGCAAAGAACTGGGGGTaGCCTTCATGCCTCTCCTGTTTCCTCAGCACCAACAGAAAGTGG +
Preference number: 5 (lower is better)
Translates to: WVGVPISIMVAKNWG*PSCLSCFLSTNRKW
Trigger: CCACTTTCTGTTGGTGCTGAGGAAACAGGAGAGGCATGAAGGGCACCCCCAGTTCTTTGCCACCATGATGCTGATTGGGACCCCCACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp GCCTGGGAACAAGGTGACAAGAGCCCGTCACAGGAAGGTGGGCCTCTGACTACTCTGTCATTTATGCCCTaGTCAGTACGGCCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: AWEQGDKSPSQEGGPLTTLSFMP*SVRPSR
Trigger: CCTGGAAGGCCGTACTGACAAGGGCATAAATGACAG...AGTAGTCAGAGGCCCACCTTCCTGTGACGGGCTCTTGTCACCTTGTTCCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS GCA 90 bp GTCCCAATCAGCATCATGGTGGCAAAGAACTGGGGGTGCCCTTCATaGCTCTCCTGTTTCCTCAGCACCAACAGAAAGTGGTGGCCAAGG +
Preference number: 5 (lower is better)
Translates to: VPISIMVAKNWGCPS*LSCFLSTNRKWWPR
Trigger: CCTTGGCCACCACTTTCTGTTGGTGCTGAGGAAACAGGAGAGGCATGAAGGGCACCCCCAGTTCTTTGCCACCATGATGCTGATTGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp TACATACTTGAGCCGTGGTCACGTCTGCGTGCTGAATGGGACGGTAGGAGCATTGCGTGGGGGTGTAAGTaGGCACCAAAAGTGGCTGGA +
Preference number: 5 (lower is better)
Translates to: YILEPWSRLRAEWDGRSIAWGCK*APKVAG
Trigger: TCCAGCCACTTTTGGTGCCAACTTACACCCCCACGC...AATGCTCCTACCGTCCCATTCAGCACGCAGACGTGACCACGGCTCAAGTATGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp CACTTGGATGCCTGCCAGGACCAAGCCGAGGGGGTGAGGTGCAGGAACAGGGCAGTAACTGATGCACTATaGACCTTGAAGATTCTGCCT +
Preference number: 5 (lower is better)
Translates to: HLDACQDQAEGVRCRNRAVTDAL*TLKILP
Trigger: AGGCAGAATCTTCAAGGTCAATAGTGCATCAGTTAC...TGCCCTGTTCCTGCACCTCACCCCCTCGGCTTGGTCCTGGCAGGCATCCAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp GGGCAAAGGGATTCAGAAAGGGCCTGGCGCACTGAAGCCTCCATCTGCAGCCCACACCCTCTGAGTTCTTaGCATTTGATGATGAGTCCT +
Preference number: 5 (lower is better)
Translates to: GQRDSERAWRTEASICSPHPLSS*HLMMSP
Trigger: AGGACTCATCATCAAATGCAAAGAACTCAGAGGGTG...TGGGCTGCAGATGGAGGCTTCAGTGCGCCAGGCCCTTTCTGAATCCCTTTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp GTCCGGGGAGAAAGCAGAGGGTGCTCTGTGGCAGAAAATGCTCTTGAAGCTGCTGCCAATAGGCTGAGTTaGCGGAGCCCAATTTTTCCA +
Preference number: 5 (lower is better)
Translates to: VRGESRGCSVAENALEAAANRLS*RSPIFP
Trigger: TGGAAAAATTGGGCTCCGCAAACTCAGCCTATTGGC...AGCAGCTTCAAGAGCATTTTCTGCCACAGAGCACCCTCTGCTTTCTCCCCGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp GGGCAAAGGGATTCAGAAAGGGCCTGGCGCACTGAAGCCTCCATCTGCAGCCCATCCTGGTTCTGCTTTTaGCATGATATGAAAGAACTG +
Preference number: 5 (lower is better)
Translates to: GQRDSERAWRTEASICSPSWFCF*HDMKEL
Trigger: CAGTTCTTTCATATCATGCAAAAAGCAGAACCAGGA...TGGGCTGCAGATGGAGGCTTCAGTGCGCCAGGCCCTTTCTGAATCCCTTTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp GCCTGGGAACAAGGTGACAAGAGCCCGTCACAGGAAGGTGGGCCTCTGACTACTATGCTTTCAAAGTGGTaGAGTCTCAAAAACCAGGAG +
Preference number: 5 (lower is better)
Translates to: AWEQGDKSPSQEGGPLTTMLSKW*SLKNQE
Trigger: CTCCTGGTTTTTGAGACTCAACCACTTTGAAAGCAT...AGTAGTCAGAGGCCCACCTTCCTGTGACGGGCTCTTGTCACCTTGTTCCCAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp GGGCAAAGGGATTCAGAAAGGGCCTGGCGCACTGAAGCCTCCATCTGCAGCCCATGCTTGCTGTGTCTCTaGAATGGTAGATATTTCCAA +
Preference number: 5 (lower is better)
Translates to: GQRDSERAWRTEASICSPCLLCL*NGRYFQ
Trigger: TTGGAAATATCTACCATTCAAGAGACACAGCAAGCA...TGGGCTGCAGATGGAGGCTTCAGTGCGCCAGGCCCTTTCTGAATCCCTTTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp TGTGAAGCTCAAATACAAACTGCTGGTACCATTTCCTATTCCCAATTCTTGGTTTGTGCCAGCGAGGTGTaGAGGACGAGGCAGTCCCCG +
Preference number: 5 (lower is better)
Translates to: CEAQIQTAGTISYSQFLVCASEV*RTRQSP
Trigger: CGGGGACTGCCTCGTCCTCAACACCTCGCTGGCACA...AACCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCTTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp TTAAAGACAATCTTCGTGTGGCCTGACCTCCATTTCGGCGTCAACCATGTATGTAGGTTGTGTGTGGGGTaGACGACACAGACAAGTTGC +
Preference number: 5 (lower is better)
Translates to: LKTIFVWPDLHFGVNHVCRLCVG*TTQTSC
Trigger: GCAACTTGTCTGTGTCGTCAACCCCACACACAACCT...ACATACATGGTTGACGCCGAAATGGAGGTCAGGCCACACGAAGATTGTCTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp TTAAAGACAATCTTCGTGTGGCCTGACCTCCATTTCGGCGTCAACCATGTATGTTGCTGTTCCGCTGGCTaGGCTGTCATTTATGCCCTT +
Preference number: 5 (lower is better)
Translates to: LKTIFVWPDLHFGVNHVCCCSAG*AVIYAL
Trigger: AAGGGCATAAATGACAGCCAAGCCAGCGGAACAGCA...ACATACATGGTTGACGCCGAAATGGAGGTCAGGCCACACGAAGATTGTCTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp AGTGACTCTTGTCCTAGTGGAAACTGTGCCCCAGATTTAGAAAGAGTATTGGTCGTGCTGAATACATACTaGAGCCGTGGTCACGTCTGC +
Preference number: 5 (lower is better)
Translates to: SDSCPSGNCAPDLERVLVVLNTY*SRGHVC
Trigger: GCAGACGTGACCACGGCTCAAGTATGTATTCAGCAC...GACCAATACTCTTTCTAAATCTGGGGCACAGTTTCCACTAGGACAAGAGTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp TGTGAAGCTCAAATACAAACTGCTGGTACCATTTCCTATTCCCAATTCTTGGTTATGGCAAGGCTGCCGTaGTCAGAGAAGAGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: CEAQIQTAGTISYSQFLVMARLP*SEKSCA
Trigger: GGCACAGCTCTTCTCTGACAACGGCAGCCTTGCCAT...AACCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCTTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp AGTCTTACTTCAAGAACACCAAGTTTGCAGTCAGTTGATCTGGGTTTTGGTTGTTGGCCAAAGGCCCATTaGGCTGTCATGGGAATGTGC +
Preference number: 5 (lower is better)
Translates to: SLTSRTPSLQSVDLGFGCWPKAH*AVMGMC
Trigger: GCACATTCCCATGACAGCCAAATGGGCCTTTGGCCA...ACAACCAAAACCCAGATCAACTGACTGCAAACTTGGTGTTCTTGAAGTAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp TATGAAAGCACTAAAAGGCCTCTATGCCATTCACACTTTATGACTCGGTCCTTCGGCCCCAATCCTTTTTaGCGACTGCAGCATCTGACA +
Preference number: 5 (lower is better)
Translates to: YESTKRPLCHSHFMTRSFGPNPF*RLQHLT
Trigger: TGTCAGATGCTGCAGTCGCAAAAAAGGATTGGGGCC...GAAGGACCGAGTCATAAAGTGTGAATGGCATAGAGGCCTTTTAGTGCTTTCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp TCCAGTGACTCTTGTCCTAGTGGAAACTGTGCCCCAGATTTAGAAAGAGTATTGTGTGGCTCAGGTAACTaGGCACAACCAGAAGGCAAA +
Preference number: 5 (lower is better)
Translates to: SSDSCPSGNCAPDLERVLCGSGN*AQPEGK
Trigger: TTTGCCTTCTGGTTGTGCCAAGTTACCTGAGCCACA...CAATACTCTTTCTAAATCTGGGGCACAGTTTCCACTAGGACAAGAGTCACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp TATGAAAGCACTAAAAGGCCTCTATGCCATTCACACTTTATGACTCGGTCCTTCATATGGAGAGGCCTTTaGGGGAGCACCATAGATGGA +
Preference number: 5 (lower is better)
Translates to: YESTKRPLCHSHFMTRSFIWRGL*GSTIDG
Trigger: TCCATCTATGGTGCTCCCCAAAAGGCCTCTCCATAT...GAAGGACCGAGTCATAAAGTGTGAATGGCATAGAGGCCTTTTAGTGCTTTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp TATGAAAGCACTAAAAGGCCTCTATGCCATTCACACTTTATGACTCGGTCCTTCGTTAAGACTATAGGCTaGTGTCACCATGCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: YESTKRPLCHSHFMTRSFVKTIG*CHHAQL
Trigger: CAGCTGGGCATGGTGACACAAGCCTATAGTCTTAAC...GAAGGACCGAGTCATAAAGTGTGAATGGCATAGAGGCCTTTTAGTGCTTTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp GTCTTACTTCAAGAACACCAAGTTTGCAGTCAGTTGATCTGGGTTTTGGTTGTGGACACATACTTTAGGTaGTGTGTGGGGTTGACGACA +
Preference number: 5 (lower is better)
Translates to: VLLQEHQVCSQLIWVLVVDTYFR*CVGLTT
Trigger: TGTCGTCAACCCCACACACAACCTAAAGTATGTGTC...CACAACCAAAACCCAGATCAACTGACTGCAAACTTGGTGTTCTTGAAGTAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp TGTGAAGCTCAAATACAAACTGCTGGTACCATTTCCTATTCCCAATTCTTGGTTCAGCCTCAGGTGTTCTaGGGCATCTGTGTGATTGGA +
Preference number: 5 (lower is better)
Translates to: CEAQIQTAGTISYSQFLVQPQVF*GICVIG
Trigger: TCCAATCACACAGATGCCCAAGAACACCTGAGGCTG...AACCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCTTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp TTAACCCAGTTGTTGGGGGAAGGGTGTTGTGTTTCAGGATCAGTTATTTTTGGTAGGACAAAGACTCAGTaGATTCTCAGGTCCTCAGTC +
Preference number: 5 (lower is better)
Translates to: LTQLLGEGCCVSGSVIFGRTKTQ*ILRSSV
Trigger: GACTGAGGACCTGAGAATCAACTGAGTCTTTGTCCT...ACCAAAAATAACTGATCCTGAAACACAACACCCTTCCCCCAACAACTGGGTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp CCAACAAGGCAGGACAAACATCACACCAAGATCTTAAATTACAGGATGTTTACATGTTTCCCCAACAATTaGCTGTTCCGCTGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: PTRQDKHHTKILNYRMFTCFPNN*LFRWLG
Trigger: GCCAAGCCAGCGGAACAGCAAATTGTTGGGGAAACA...TGTAAACATCCTGTAATTTAAGATCTTGGTGTGATGTTTGTCCTGCCTTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp GTCTTACTTCAAGAACACCAAGTTTGCAGTCAGTTGATCTGGGTTTTGGTTGTGTGGCAGAAAATGCTCTaGAAGCTGCTTAAGCCTCAG +
Preference number: 5 (lower is better)
Translates to: VLLQEHQVCSQLIWVLVVWQKML*KLLKPQ
Trigger: CTGAGGCTTAAGCAGCTTCAAGAGCATTTTCTGCCA...CACAACCAAAACCCAGATCAACTGACTGCAAACTTGGTGTTCTTGAAGTAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp TTAACCCAGTTGTTGGGGGAAGGGTGTTGTGTTTCAGGATCAGTTATTTTTGGTCATCTTATGTGGTGTTaGACACCACTGCTTGCTGTG +
Preference number: 5 (lower is better)
Translates to: LTQLLGEGCCVSGSVIFGHLMWC*TPLLAV
Trigger: CACAGCAAGCAGTGGTGTCAAACACCACATAAGATG...ACCAAAAATAACTGATCCTGAAACACAACACCCTTCCCCCAACAACTGGGTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp TTAAAGACAATCTTCGTGTGGCCTGACCTCCATTTCGGCGTCAACCATGTATGTGATTTAGAAAGAGTATaGGTCTGGGTAGGCTATGGA +
Preference number: 5 (lower is better)
Translates to: LKTIFVWPDLHFGVNHVCDLERV*VWVGYG
Trigger: TCCATAGCCTACCCAGACCAATACTCTTTCTAAATC...ACATACATGGTTGACGCCGAAATGGAGGTCAGGCCACACGAAGATTGTCTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp TCCAGTGACTCTTGTCCTAGTGGAAACTGTGCCCCAGATTTAGAAAGAGTATTGCTGCTTGATGGTGTTTaGATCCTTTCAAAACTAGCG +
Preference number: 5 (lower is better)
Translates to: SSDSCPSGNCAPDLERVLLLDGV*ILSKLA
Trigger: CGCTAGTTTTGAAAGGATCAAAACACCATCAAGCAG...CAATACTCTTTCTAAATCTGGGGCACAGTTTCCACTAGGACAAGAGTCACTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp AGTCTTACTTCAAGAACACCAAGTTTGCAGTCAGTTGATCTGGGTTTTGGTTGTGAATTAACCCAGTTGTaGGGGGAAGGGTGTTGTGTT +
Preference number: 5 (lower is better)
Translates to: SLTSRTPSLQSVDLGFGCELTQL*GEGCCV
Trigger: AACACAACACCCTTCCCCCAACAACTGGGTTAATTC...ACAACCAAAACCCAGATCAACTGACTGCAAACTTGGTGTTCTTGAAGTAAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp GTCTTACTTCAAGAACACCAAGTTTGCAGTCAGTTGATCTGGGTTTTGGTTGTGATAAAGAGCACCTGCTaGCTAAGGTTGTTATGGGGA +
Preference number: 5 (lower is better)
Translates to: VLLQEHQVCSQLIWVLVVIKSTC*LRLLWG
Trigger: TCCCCATAACAACCTTAGCAAGCAGGTGCTCTTTAT...CACAACCAAAACCCAGATCAACTGACTGCAAACTTGGTGTTCTTGAAGTAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp AAGCAAATCTACTCCAGTCTTTCTCTCCCTGCTCCCTCAACTATCCCAGGACAACAAGTAACAGGAAATTaGAGCTTTATAGAGCTGGTT +
Preference number: 5 (lower is better)
Translates to: KQIYSSLSLPAPSTIPGQQVTGN*SFIELV
Trigger: AACCAGCTCTATAAAGCTCAAATTTCCTGTTACTTG...TTGTCCTGGGATAGTTGAGGGAGCAGGGAGAGAAAGACTGGAGTAGATTTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp AGTCTTACTTCAAGAACACCAAGTTTGCAGTCAGTTGATCTGGGTTTTGGTTGTTCAAGAACACCAAGTTaGCAGTCAGTTGATCTGGGT +
Preference number: 5 (lower is better)
Translates to: SLTSRTPSLQSVDLGFGCSRTPS*QSVDLG
Trigger: ACCCAGATCAACTGACTGCAAACTTGGTGTTCTTGA...ACAACCAAAACCCAGATCAACTGACTGCAAACTTGGTGTTCTTGAAGTAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp TTAACCCAGTTGTTGGGGGAAGGGTGTTGTGTTTCAGGATCAGTTATTTTTGGTATAGAAATGACATGGTaGCTGTTGGTCAGAAGCCAT +
Preference number: 5 (lower is better)
Translates to: LTQLLGEGCCVSGSVIFGIEMTW*LLVRSH
Trigger: ATGGCTTCTGACCAACAGCAACCATGTCATTTCTAT...ACCAAAAATAACTGATCCTGAAACACAACACCCTTCCCCCAACAACTGGGTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp TATGAAAGCACTAAAAGGCCTCTATGCCATTCACACTTTATGACTCGGTCCTTCATTCTTTTCTACTACTaGCTCAACAGAAGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: YESTKRPLCHSHFMTRSFILFYY*LNRRQR
Trigger: CCTTTGCCTTCTGTTGAGCAAGTAGTAGAAAAGAAT...GAAGGACCGAGTCATAAAGTGTGAATGGCATAGAGGCCTTTTAGTGCTTTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp CAATTCTTGGTTGTTAGTTTGCTCCTTCTTCTCCAGTTCTTCACATATGGATATCTGAGTTCTTTGCATTaGATGATGAGTCCTGGTTCT +
Preference number: 5 (lower is better)
Translates to: QFLVVSLLLLLQFFTYGYLSSLH*MMSPGS
Trigger: AGAACCAGGACTCATCATCAAATGCAAAGAACTCAG...ATATCCATATGTGAAGAACTGGAGAAGAAGGAGCAAACTAACAACCAAGAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp TGTGAAGCTCAAATACAAACTGCTGGTACCATTTCCTATTCCCAATTCTTGGTTTTCTTAGTGAGGTTTTaGTTTGTTGATCTGGAGCAC +
Preference number: 5 (lower is better)
Translates to: CEAQIQTAGTISYSQFLVFLVRF*FVDLEH
Trigger: GTGCTCCAGATCAACAAACAAAAACCTCACTAAGAA...AACCAAGAATTGGGAATAGGAAATGGTACCAGCAGTTTGTATTTGAGCTTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS-3UTR CAA 90 bp CCAACAAGGCAGGACAAACATCACACCAAGATCTTAAATTACAGGATGTTTACATCATGCAGATACCAATaGTTAAAGACAATCTTCGTG +
Preference number: 5 (lower is better)
Translates to: PTRQDKHHTKILNYRMFTSCRYQ*LKTIFV
Trigger: CACGAAGATTGTCTTTAACAATTGGTATCTGCATGA...TGTAAACATCCTGTAATTTAAGATCTTGGTGTGATGTTTGTCCTGCCTTGTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS TCA 72 bp GTCACCGGGTTGGCGTGCAGCCCCGCCTCCTGGTGGTaGAGGTGGTGGGGGTGGGCGTGGTGGCGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: VTGLACSPASWW*RWWGWAWWRRW
Trigger: CCACCTCCGCCACCACGCCCACCCCCACCACCTTCACCACCAGGAGGCGGGGCTGCACGCCAACCCGGTGAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS GCA 72 bp GGCGGCCTTCCCACTGGCAGGAGAACAAGGGACACATaGACAGGCAGGGCGTCACCGGGTTGGCGTGCAGCC +
Preference number: 6 (lower is better)
Translates to: GGLPTGRRTRDT*TGRASPGWRAA
Trigger: GGCTGCACGCCAACCCGGTGACGCCCTGCCTGTGCATGTGTCCCTTGTTCTCCTGCCAGTGGGAAGGCCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS GCA 72 bp ATCTCGGCTCCCTGGAGGATGTCAACCCTATGGATCTaGCGCAGGTGGGGCACCACCACCTCCAGGCGGCCT +
Preference number: 6 (lower is better)
Translates to: ISAPWRMSTLWI*RRWGTTTSRRP
Trigger: AGGCCGCCTGGAGGTGGTGGTGCCCCACCTGCGGCAGATCCATAGGGTTGACATCCTCCAGGGAGCCGAGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS CCA 72 bp GTGGGAGAGATGGTGAGGGTGGAAGCTGCCTTGCTCTaGAGCGCTCTGAGTGACGGCGCGCCGACTGGACAC +
Preference number: 6 (lower is better)
Translates to: VGEMVRVEAALL*SALSDGAPTGH
Trigger: GTGTCCAGTCGGCGCGCCGTCACTCAGAGCGCTCCAGAGCAAGGCAGCTTCCACCCTCACCATCTCTCCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS GCA 72 bp GAGTGCATGATGATCCAATCAGCCGGCGCGGGGAGGTaGATGTCCGTGGCCAGGAAGACGATCTCGGCTCCC +
Preference number: 6 (lower is better)
Translates to: ECMMIQSAGAGR*MSVARKTISAP
Trigger: GGGAGCCGAGATCGTCTTCCTGGCCACGGACATGCACCTCCCCGCGCCGGCTGATTGGATCATCATGCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS CAA 72 bp TTGGTCCGGGAAGGCAGCGGAGGAAGCTGTGAGTCCTaGGGCCCTGGAAGGAGCGCAGCCTCTGAGACACTC +
Preference number: 6 (lower is better)
Translates to: LVREGSGGSCES*GPGRSAASETL
Trigger: GAGTGTCTCAGAGGCTGCGCTCCTTCCAGGGCCCAAGGACTCACAGCTTCCTCCGCTGCCTTCCCGGACCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS GCA 72 bp CCCAATGGCAAGGCTGCCGTTGTCAGAGAAGAGCTGTaGCAGCGAGGTGTTGAGGACGAGGCAGTCCCCGTC +
Preference number: 6 (lower is better)
Translates to: PNGKAAVVREEL*QRGVEDEAVPV
Trigger: GACGGGGACTGCCTCGTCCTCAACACCTCGCTGGCACAGCTCTTCTCTGACAACGGCAGCCTTGCCATTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS CAA 72 bp ACGCACTCAAGAACAGACCGGGGCGTGGCCTCCCACTaGAGGCGCCGATGGTTTCTGTTGAGCTCCAGGCGA +
Preference number: 6 (lower is better)
Translates to: THSRTDRGVASH*RRRWFLLSSRR
Trigger: TCGCCTGGAGCTCAACAGAAACCATCGGCGCCTCAAGTGGGAGGCCACGCCCCGGTCTGTTCTTGAGTGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS CAA 90 bp ATGGCAAGGCTGCCGTTGTCAGAGAAGAGCTGTGCCAGCGAGGTGTaGAGGACGAGGCAGTCCCCGTCCGTAATCACCGAGTCCACGCAC +
Preference number: 6 (lower is better)
Translates to: MARLPLSEKSCASEV*RTRQSPSVITESTH
Trigger: GTGCGTGGACTCGGTGATTACGGACGGGGACTGCCTCGTCCTCAACACCTCGCTGGCACAGCTCTTCTCTGACAACGGCAGCCTTGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS TCA 72 bp GAGCATCCGTGGCTCCTGGCCTCACATTTCAGCTTCTaGGGGGAGGACCTCTGTCGCGGTGATGGCAATCCC +
Preference number: 6 (lower is better)
Translates to: EHPWLLASHFSF*GEDLCRGDGNP
Trigger: GGGATTGCCATCACCGCGACAGAGGTCCTCCCCTCAGAAGCTGAAATGTGAGGCCAGGAGCCACGGATGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS GCA 72 bp CTCAGCACCAACAGAAAGTGGTGGCCAAGGCAGGAGTaGATGATGATCCAATCAGCCGGCGCGGGGAGGTGC +
Preference number: 6 (lower is better)
Translates to: LSTNRKWWPRQE*MMIQSAGAGRC
Trigger: GCACCTCCCCGCGCCGGCTGATTGGATCATCATGCACTCCTGCCTTGGCCACCACTTTCTGTTGGTGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS CCA 72 bp TGCATGTCCGTGGCCAGGAAGACGATCTCGGCTCCCTaGAGGATGTCAACCCTATGGATCTGCCGCAGGTGG +
Preference number: 6 (lower is better)
Translates to: CMSVARKTISAP*RMSTLWICRRW
Trigger: CCACCTGCGGCAGATCCATAGGGTTGACATCCTCCAGGGAGCCGAGATCGTCTTCCTGGCCACGGACATGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS CCA 72 bp AGCAGTCGGCCTGGGTGGGGGTCCCAATCAGCATCATaGTGGCAAAGAACTGGGGGTGCCCTTCATGCCTCT +
Preference number: 6 (lower is better)
Translates to: SSRPGWGSQSAS*WQRTGGALHAS
Trigger: AGAGGCATGAAGGGCACCCCCAGTTCTTTGCCACCATGATGCTGATTGGGACCCCCACCCAGGCCGACTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS CAA 72 bp CTGCCGTTGTCAGAGAAGAGCTGTGCCAGCGAGGTGTaGAGGACGAGGCAGTCCCCGTCCGTAATCACCGAG +
Preference number: 6 (lower is better)
Translates to: LPLSEKSCASEV*RTRQSPSVITE
Trigger: CTCGGTGATTACGGACGGGGACTGCCTCGTCCTCAACACCTCGCTGGCACAGCTCTTCTCTGACAACGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS TCA 72 bp ACATTTCAGCTTCTGAGGGGAGGACCTCTGTCGCGGTaGTGGCAATCCCAATGGCAAGGCTGCCGTTGTCAG +
Preference number: 6 (lower is better)
Translates to: TFQLLRGGPLSR*WQSQWQGCRCQ
Trigger: CTGACAACGGCAGCCTTGCCATTGGGATTGCCATCACCGCGACAGAGGTCCTCCCCTCAGAAGCTGAAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS CAA 72 bp CGCCGACTGGACACATACTTTAGGTTGTGTGTGGGGTaGACGACACAGACAAGTTGCCCGGCAGCGGAGAAA +
Preference number: 6 (lower is better)
Translates to: RRLDTYFRLCVG*TTQTSCPAAEK
Trigger: TTTCTCCGCTGCCGGGCAACTTGTCTGTGTCGTCAACCCCACACACAACCTAAAGTATGTGTCCAGTCGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS TCA 72 bp GCCGACTGGACACATACTTTAGGTTGTGTGTGGGGTTaGCGACACAGACAAGTTGCCCGGCAGCGGAGAAAA +
Preference number: 6 (lower is better)
Translates to: ADWTHTLGCVWG*RHRQVARQRRK
Trigger: TTTTCTCCGCTGCCGGGCAACTTGTCTGTGTCGTCAACCCCACACACAACCTAAAGTATGTGTCCAGTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400405.4
CDS CCA 72 bp TGCCTCTCCTGTTTCCTCAGCACCAACAGAAAGTGGTaGCCAAGGCAGGAGTGCATGATGATCCAATCAGCC +
Preference number: 6 (lower is better)
Translates to: CLSCFLSTNRKW*PRQECMMIQSA
Trigger: GGCTGATTGGATCATCATGCACTCCTGCCTTGGCCACCACTTTCTGTTGGTGCTGAGGAAACAGGAGAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400405.4