Pregenerated sensors for SIAH2 (Homo sapiens)
Ensembl gene IDs: ENSG00000181788Ensembl transcript IDs: ENST00000312960.4, ENST00000472885.1, ENST00000482706.1
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATATGACTTGCTTTCCTAGGCAATCCACCCAAAACATAGGTGAGTaGCCAAATCTCAGGCGTGCGTTCATGTGGATCTATAGTTCTAGT | + |
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Preference number: 1 (lower is better) Translates to: HMTCFPRQSTQNIGE*PNLRRAFMWIYSSS Trigger: ACTAGAACTATAGATCCACATGAACGCACGCCTGAGATTTGGCCACTCACCTATGTTTTGGGTGGATTGCCTAGGAAAGCAAGTCATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| 3UTR GCA 90 bp | GTGAGCAAAACTAATTACATGAGAACTATCAATGGCCATATGACTTaGTTTCCTAGGCAATCCACCCAAAACATAGGTGAGTGGCCAAAT | + |
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Preference number: 1 (lower is better) Translates to: VSKTNYMRTINGHMT*FPRQSTQNIGEWPN Trigger: ATTTGGCCACTCACCTATGTTTTGGGTGGATTGCCTAGGAAAGCAAGTCATATGGCCATTGATAGTTCTCATGTAATTAGTTTTGCTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| 3UTR TCA 90 bp | GACCCTTTCCCACAATTTAACCCAGTAATTCTCAAACATTACTGTTaGAAAGAATCACCTGATGAGACTGTTAAATTGGCAGGCTCCCTA | + |
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Preference number: 1 (lower is better) Translates to: DPFPQFNPVILKHYC*KESPDETVKLAGSL Trigger: TAGGGAGCCTGCCAATTTAACAGTCTCATCAGGTGATTCTTTTCAACAGTAATGTTTGAGAATTACTGGGTTAAATTGTGGGAAAGGGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| 3UTR-3UTR TCA 90 bp | ACTGTTGAGGAGGGCTTCCGAGGGAAGCCACGTGTAAACGGGTCATCTGTACTACACCCAAAACATAGGTaGGTGGCCAAATCTCAGGCG | + |
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Preference number: 2 (lower is better) Translates to: TVEEGFRGKPRVNGSSVLHPKHR*VAKSQA Trigger: CGCCTGAGATTTGGCCACTCACCTATGTTTTGGGTG...TAGTACAGATGACCCGTTTACACGTGGCTTCCCTCGGAAGCCCTCCTCAACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| 3UTR-3UTR GCA 90 bp | TCTGCTGACAGTCACTGTGCTTTTGTCAATGTCAAGGGACCAATATGGGAAGGCAGCCAGATGGGACACTaGTGTTCAAACAAAACACGG | + |
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Preference number: 2 (lower is better) Translates to: SADSHCAFVNVKGPIWEGSQMGH*CSNKTR Trigger: CCGTGTTTTGTTTGAACAGCAGTGTCCCATCTGGCT...GCCTTCCCATATTGGTCCCTTGACATTGACAAAAGCACAGTGACTGTCAGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| 3UTR-3UTR CCA 90 bp | GTTGAGGAGGGCTTCCGAGGGAAGCCACGTGTAAACGGGTCATCTGTACTAGTGAGCACCTTTAAAATCTaGACCCTTTCCCACAATTTA | + |
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Preference number: 2 (lower is better) Translates to: VEEGFRGKPRVNGSSVLVSTFKI*TLSHNL Trigger: TAAATTGTGGGAAAGGGTCCAGATTTTAAAGGTGCT...CACTAGTACAGATGACCCGTTTACACGTGGCTTCCCTCGGAAGCCCTCCTCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| 3UTR-3UTR CCA 90 bp | ACTGTTGAGGAGGGCTTCCGAGGGAAGCCACGTGTAAACGGGTCATCTGTACTACATGAGAACTATCAATaGCCATATGACTTGCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: TVEEGFRGKPRVNGSSVLHENYQ*PYDLLS Trigger: GGAAAGCAAGTCATATGGCCATTGATAGTTCTCATG...TAGTACAGATGACCCGTTTACACGTGGCTTCCCTCGGAAGCCCTCCTCAACAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| 3UTR-3UTR GCA 90 bp | GCACTCCGGGTGATTCAGTGTCTATTAGCCAGCCATCCAATTTCAGAAACACTGTCTATAGAAGCCCTGTaGAACAGCCTGTCAAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: ALRVIQCLLASHPISETLSIEAL*NSLSSV Trigger: AACACTTGACAGGCTGTTGCACAGGGCTTCTATAGA...CAGTGTTTCTGAAATTGGATGGCTGGCTAATAGACACTGAATCACCCGGAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| 3UTR-3UTR TCA 90 bp | GTAAAGGAATCTGCTGACAGTCACTGTGCTTTTGTCAATGTCAAGGGACCAATACCATTCCTAACACACTaGTCTATAGAAGCCCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: VKESADSHCAFVNVKGPIPFLTH*SIEALC Trigger: GCACAGGGCTTCTATAGATCAGTGTGTTAGGAATGG...TATTGGTCCCTTGACATTGACAAAAGCACAGTGACTGTCAGCAGATTCCTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| 3UTR-3UTR TCA 90 bp | GTAGAAAGACAAACAGTATCGGCAGAGGGCAACCTTAAAGCACCTTTAAAATCTGGTAATTGTGGGTCCTaGCTTGTGAAGACATATGGA | + |
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Preference number: 2 (lower is better) Translates to: VERQTVSAEGNLKAPLKSGNCGS*LVKTYG Trigger: TCCATATGTCTTCACAAGTCAGGACCCACAATTACC...AGATTTTAAAGGTGCTTTAAGGTTGCCCTCTGCCGATACTGTTTGTCTTTCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| 3UTR-3UTR TCA 90 bp | ATCTGCAATTTTAAGATAAGCACTCCGGGTGATTCAGTGTCTATTAGCCAGCCAAGTAAAGGAATCTGCTaGCAGTCACTGTGCTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: ICNFKISTPGDSVSISQPSKGIC*QSLCFC Trigger: ACAAAAGCACAGTGACTGTCAGCAGATTCCTTTACT...TGGCTGGCTAATAGACACTGAATCACCCGGAGTGCTTATCTTAAAATTGCAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| 3UTR-3UTR CCA 90 bp | GTAGAAAGACAAACAGTATCGGCAGAGGGCAACCTTAAAGCACCTTTAAAATCTGTTAATGAACTTTGTTaGGTCGAAGCCAGATGGGAC | + |
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Preference number: 2 (lower is better) Translates to: VERQTVSAEGNLKAPLKSVNELC*VEARWD Trigger: GTCCCATCTGGCTTCGACCCAACAAAGTTCATTAAC...AGATTTTAAAGGTGCTTTAAGGTTGCCCTCTGCCGATACTGTTTGTCTTTCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| 3UTR TCA 72 bp | AGGCAGGCAGGAAGGGGCCTCCCATTCCTAACACACTaGTCTATAGAAGCCCTGTGCAACAGCCTGTCAAGT | + |
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Preference number: 3 (lower is better) Translates to: RQAGRGLPFLTH*SIEALCNSLSS Trigger: ACTTGACAGGCTGTTGCACAGGGCTTCTATAGATCAGTGTGTTAGGAATGGGAGGCCCCTTCCTGCCTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| 3UTR CCA 72 bp | TGCTTTCCTAGGCAATCCACCCAAAACATAGGTGAGTaGCCAAATCTCAGGCGTGCGTTCATGTGGATCTAT | + |
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Preference number: 3 (lower is better) Translates to: CFPRQSTQNIGE*PNLRRAFMWIY Trigger: ATAGATCCACATGAACGCACGCCTGAGATTTGGCCACTCACCTATGTTTTGGGTGGATTGCCTAGGAAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| 3UTR CCA 72 bp | ATAGGTGAGTGGCCAAATCTCAGGCGTGCGTTCATGTaGATCTATAGTTCTAGTTTTAATTTGAGGGTTGGG | + |
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Preference number: 3 (lower is better) Translates to: IGEWPNLRRAFM*IYSSSFNLRVG Trigger: CCCAACCCTCAAATTAAAACTAGAACTATAGATCCACATGAACGCACGCCTGAGATTTGGCCACTCACCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| 3UTR-3UTR CAA 90 bp | GTAGAAAGACAAACAGTATCGGCAGAGGGCAACCTTAAAGCACCTTTAAAATCTGATGAGACTGTTAAATaGGCAGGCTCCCTAAATCTG | + |
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Preference number: 3 (lower is better) Translates to: VERQTVSAEGNLKAPLKSDETVK*AGSLNL Trigger: CAGATTTAGGGAGCCTGCCAATTTAACAGTCTCATC...AGATTTTAAAGGTGCTTTAAGGTTGCCCTCTGCCGATACTGTTTGTCTTTCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| 3UTR GCA 72 bp | ACTAATTACATGAGAACTATCAATGGCCATATGACTTaGTTTCCTAGGCAATCCACCCAAAACATAGGTGAG | + |
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Preference number: 3 (lower is better) Translates to: TNYMRTINGHMT*FPRQSTQNIGE Trigger: CTCACCTATGTTTTGGGTGGATTGCCTAGGAAAGCAAGTCATATGGCCATTGATAGTTCTCATGTAATTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS-3UTR GCA 90 bp | TGTGCTTTTGTCAATGTCAAGGGACCAATATGGGAAGGCAGGCAGGAAGGGGCCGTCAGCTCGTGGTGCTaGGGGGACACCGGGCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: CAFVNVKGPIWEGRQEGAVSSWC*GDTGPA Trigger: GGCCGGCCCGGTGTCCCCGCAGCACCACGAGCTGAC...GGCCCCTTCCTGCCTGCCTTCCCATATTGGTCCCTTGACATTGACAAAAGCACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS-3UTR CCA 90 bp | GTTGAGGAGGGCTTCCGAGGGAAGCCACGTGTAAACGGGTCATCTGTACTAGTGCGGCAGGCGGAGGGCTaGACCGCGCTGATGCACTCC | + |
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Preference number: 4 (lower is better) Translates to: VEEGFRGKPRVNGSSVLVRQAEG*TALMHS Trigger: GGAGTGCATCAGCGCGGTCCAGCCCTCCGCCTGCCG...CACTAGTACAGATGACCCGTTTACACGTGGCTTCCCTCGGAAGCCCTCCTCAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS-3UTR GCA 90 bp | CCCATTCATCCCAGGTTAATGAACTTTGTTGGGTCGAAGCCAGATGGGACACTGGCGTCAGGGCGCCCCTaGACGTCGGGCAGCAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: PIHPRLMNFVGSKPDGTLASGRP*TSGSSS Trigger: TGAGCTGCTGCCCGACGTGCAGGGGCGCCCTGACGC...CAGTGTCCCATCTGGCTTCGACCCAACAAAGTTCATTAACCTGGGATGAATGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS-3UTR TCA 90 bp | ACTGTTGAGGAGGGCTTCCGAGGGAAGCCACGTGTAAACGGGTCATCTGTACTAGGCAGTCGCTGTTCATaGTGGCCGCAGCCACACCGT | + |
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Preference number: 4 (lower is better) Translates to: TVEEGFRGKPRVNGSSVLGSRCS*WPQPHR Trigger: ACGGTGTGGCTGCGGCCATCATGAACAGCGACTGCC...TAGTACAGATGACCCGTTTACACGTGGCTTCCCTCGGAAGCCCTCCTCAACAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS-3UTR GCA 90 bp | GAACAGCATCCAAATCACCAACAGGCCAACCCCATTCATCCCAGGTTAATGAACGAGGTCAGCTCGTGGTaGTGCGGGGACACCGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: EQHPNHQQANPIHPRLMNEVSSW*CGDTGP Trigger: CGGCCCGGTGTCCCCGCAGCACCACGAGCTGACCTC...GTTCATTAACCTGGGATGAATGGGGTTGGCCTGTTGGTGATTTGGATGCTGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS-3UTR CCA 90 bp | TGTGCTTTTGTCAATGTCAAGGGACCAATATGGGAAGGCAGGCAGGAAGGGGCCGCTCCGAACCAACCATaGAACTGCGGGCGCCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: CAFVNVKGPIWEGRQEGAAPNQP*NCGRLP Trigger: AGGCAGGCGCCCGCAGTTCCATGGTTGGTTCGGAGC...GGCCCCTTCCTGCCTGCCTTCCCATATTGGTCCCTTGACATTGACAAAAGCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS-3UTR CCA 90 bp | TGTGCTTTTGTCAATGTCAAGGGACCAATATGGGAAGGCAGGCAGGAAGGGGCCACCAGGTGCCCGGCCTaGCACTGCAGAATAGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: CAFVNVKGPIWEGRQEGATRCPA*HCRIGG Trigger: GCCTCCTATTCTGCAGTGCCAGGCCGGGCACCTGGT...GGCCCCTTCCTGCCTGCCTTCCCATATTGGTCCCTTGACATTGACAAAAGCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS-3UTR GCA 90 bp | TTGTTGGGTCGAAGCCAGATGGGACACTGCTGTTCAAACAAAACACGGGTAATTGGAGTGTGCTGGGGCTaGGGCGGCGGCTGCTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LLGRSQMGHCCSNKTRVIGVCWG*GGGCLL Trigger: CAGCAAGCAGCCGCCGCCGCAGCCCCAGCACACTCC...AATTACCCGTGTTTTGTTTGAACAGCAGTGTCCCATCTGGCTTCGACCCAACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS-3UTR TCA 90 bp | ATCACAGAACAGCATCCAAATCACCAACAGGCCAACCCCATTCATCCCAGGTTAGCAGCCACACCGTCATaGATCGAACGGGGCGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: ITEQHPNHQQANPIHPRLAATPS*IERGVA Trigger: GGCCACGCCCCGTTCGATTCATGACGGTGTGGCTGC...TAACCTGGGATGAATGGGGTTGGCCTGTTGGTGATTTGGATGCTGTTCTGTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS-3UTR CCA 90 bp | TTTGTTGGGTCGAAGCCAGATGGGACACTGCTGTTCAAACAAAACACGGGTAATAGCGAGGTCAGCTCGTaGTGCTGCGGGGACACCGGG | + |
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Preference number: 4 (lower is better) Translates to: FVGSKPDGTLLFKQNTGNSEVSS*CCGDTG Trigger: CCCGGTGTCCCCGCAGCACCACGAGCTGACCTCGCT...ATTACCCGTGTTTTGTTTGAACAGCAGTGTCCCATCTGGCTTCGACCCAACAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS-3UTR TCA 90 bp | ACAAAAGTAAAGGAATCTGCTGACAGTCACTGTGCTTTTGTCAATGTCAAGGGAAGGGCTGGACCGCGCTaGTGCACTCCGCAGCCCCCG | + |
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Preference number: 4 (lower is better) Translates to: TKVKESADSHCAFVNVKGRAGPR*CTPQPP Trigger: CGGGGGCTGCGGAGTGCATCAGCGCGGTCCAGCCCT...TCCCTTGACATTGACAAAAGCACAGTGACTGTCAGCAGATTCCTTTACTTTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS-3UTR GCA 90 bp | GGTCGAAGCCAGATGGGACACTGCTGTTCAAACAAAACACGGGTAATTGTGGGTGGCTGCGGCGGCGGCTaGTTGCTGCAGGGTTTATTA | + |
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Preference number: 4 (lower is better) Translates to: GRSQMGHCCSNKTRVIVGGCGGG*LLQGLL Trigger: TAATAAACCCTGCAGCAAGCAGCCGCCGCCGCAGCC...ACCCACAATTACCCGTGTTTTGTTTGAACAGCAGTGTCCCATCTGGCTTCGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS-3UTR GCA 90 bp | TGCTTTTGTCAATGTCAAGGGACCAATATGGGAAGGCAGGCAGGAAGGGGCCTCGCAAAGTTCTCGGCTTaGTTGCGGGTGCCAATGAGC | + |
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Preference number: 4 (lower is better) Translates to: CFCQCQGTNMGRQAGRGLAKFSA*LRVPMS Trigger: GCTCATTGGCACCCGCAAGCAAGCCGAGAACTTTGC...GAGGCCCCTTCCTGCCTGCCTTCCCATATTGGTCCCTTGACATTGACAAAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS-3UTR CCA 90 bp | GTTGAGGAGGGCTTCCGAGGGAAGCCACGTGTAAACGGGTCATCTGTACTAGTGTCAGGGAACAGCCCGTaGTGGCATACTTACAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: VEEGFRGKPRVNGSSVLVSGNSP*WHTYRE Trigger: TTCCCTGTAAGTATGCCACCACGGGCTGTTCCCTGA...CACTAGTACAGATGACCCGTTTACACGTGGCTTCCCTCGGAAGCCCTCCTCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS-3UTR TCA 90 bp | TGTGCTTTTGTCAATGTCAAGGGACCAATATGGGAAGGCAGGCAGGAAGGGGCCCACCCAAAACATAGGTaGGTGGCCAAATCTCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: CAFVNVKGPIWEGRQEGAHPKHR*VAKSQA Trigger: CGCCTGAGATTTGGCCACTCACCTATGTTTTGGGTG...GGCCCCTTCCTGCCTGCCTTCCCATATTGGTCCCTTGACATTGACAAAAGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS-3UTR CCA 90 bp | GAGTGGCCAAATCTCAGGCGTGCGTTCATGTGGATCTATAGTTCTAGTTTTAATCGGTGCGCAGAGCCCTaGCCCACCCGCTTCTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: EWPNLRRAFMWIYSSSFNRCAEP*PTRFWN Trigger: GTTCCAGAAGCGGGTGGGCCAGGGCTCTGCGCACCG...ATTAAAACTAGAACTATAGATCCACATGAACGCACGCCTGAGATTTGGCCACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS-3UTR CCA 90 bp | CCCATTCATCCCAGGTTAATGAACTTTGTTGGGTCGAAGCCAGATGGGACACTGGGAAGCACCAGGACATaGGCAGGAGTAGGGACGGTA | + |
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Preference number: 4 (lower is better) Translates to: PIHPRLMNFVGSKPDGTLGSTRT*AGVGTV Trigger: TACCGTCCCTACTCCTGCCCATGTCCTGGTGCTTCC...CAGTGTCCCATCTGGCTTCGACCCAACAAAGTTCATTAACCTGGGATGAATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS-3UTR CCA 90 bp | GAACAGCATCCAAATCACCAACAGGCCAACCCCATTCATCCCAGGTTAATGAACGAATCGAACGGGGCGTaGCCTCCCAGGTCAATCTCC | + |
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Preference number: 4 (lower is better) Translates to: EQHPNHQQANPIHPRLMNESNGA*PPRSIS Trigger: GGAGATTGACCTGGGAGGCCACGCCCCGTTCGATTC...GTTCATTAACCTGGGATGAATGGGGTTGGCCTGTTGGTGATTTGGATGCTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS-3UTR TCA 90 bp | ACTGTTGAGGAGGGCTTCCGAGGGAAGCCACGTGTAAACGGGTCATCTGTACTATCTCCAGCACCAGCATaGAGTGATGGCCAAAACATG | + |
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Preference number: 4 (lower is better) Translates to: TVEEGFRGKPRVNGSSVLSPAPA*SDGQNM Trigger: CATGTTTTGGCCATCACTTCATGCTGGTGCTGGAGA...TAGTACAGATGACCCGTTTACACGTGGCTTCCCTCGGAAGCCCTCCTCAACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS-3UTR TCA 90 bp | GCACTCCGGGTGATTCAGTGTCTATTAGCCAGCCATCCAATTTCAGAAACACTGCACACCAGCTACTGTTaGGGAGGGCTTCCGAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: ALRVIQCLLASHPISETLHTSYC*GGLPRE Trigger: TTCCCTCGGAAGCCCTCCTCAACAGTAGCTGGTGTG...CAGTGTTTCTGAAATTGGATGGCTGGCTAATAGACACTGAATCACCCGGAGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS-3UTR GCA 90 bp | GGTCGAAGCCAGATGGGACACTGCTGTTCAAACAAAACACGGGTAATTGTGGGTACAGGGAAACAGGACTaGCGAGGCCACCTTCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: GRSQMGHCCSNKTRVIVGTGKQD*RGHLLH Trigger: ATGGAGAAGGTGGCCTCGGCAGTCCTGTTTCCCTGT...ACCCACAATTACCCGTGTTTTGTTTGAACAGCAGTGTCCCATCTGGCTTCGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS-3UTR GCA 90 bp | TGTGCTTTTGTCAATGTCAAGGGACCAATATGGGAAGGCAGGCAGGAAGGGGCCATGCTCTTGTGGGCGTaGATGAGATGGGACATCACA | + |
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Preference number: 4 (lower is better) Translates to: CAFVNVKGPIWEGRQEGAMLLWA*MRWDIT Trigger: TGTGATGTCCCATCTCATGCACGCCCACAAGAGCAT...GGCCCCTTCCTGCCTGCCTTCCCATATTGGTCCCTTGACATTGACAAAAGCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS-3UTR CCA 90 bp | GGTCGAAGCCAGATGGGACACTGCTGTTCAAACAAAACACGGGTAATTGTGGGTGGGAACAGCCCGTGGTaGCATACTTACAGGGAAACA | + |
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Preference number: 4 (lower is better) Translates to: GRSQMGHCCSNKTRVIVGGNSPW*HTYRET Trigger: TGTTTCCCTGTAAGTATGCCACCACGGGCTGTTCCC...ACCCACAATTACCCGTGTTTTGTTTGAACAGCAGTGTCCCATCTGGCTTCGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS-3UTR CCA 90 bp | GTTGAGGAGGGCTTCCGAGGGAAGCCACGTGTAAACGGGTCATCTGTACTAGTGGTTAATGAACTTTGTTaGGTCGAAGCCAGATGGGAC | + |
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Preference number: 4 (lower is better) Translates to: VEEGFRGKPRVNGSSVLVVNELC*VEARWD Trigger: GTCCCATCTGGCTTCGACCCAACAAAGTTCATTAAC...CACTAGTACAGATGACCCGTTTACACGTGGCTTCCCTCGGAAGCCCTCCTCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS-3UTR TCA 90 bp | GGTCGAAGCCAGATGGGACACTGCTGTTCAAACAAAACACGGGTAATTGTGGGTAGCACCAGCATGAAGTaGTGGCCAAAACATGACTGC | + |
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Preference number: 4 (lower is better) Translates to: GRSQMGHCCSNKTRVIVGSTSMK*WPKHDC Trigger: GCAGTCATGTTTTGGCCATCACTTCATGCTGGTGCT...ACCCACAATTACCCGTGTTTTGTTTGAACAGCAGTGTCCCATCTGGCTTCGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS-3UTR GCA 90 bp | GAGTGGCCAAATCTCAGGCGTGCGTTCATGTGGATCTATAGTTCTAGTTTTAATTGGTTACACACCAGGTaGCCGGCCTGGCACTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: EWPNLRRAFMWIYSSSFNWLHTR*PAWHCR Trigger: TCTGCAGTGCCAGGCCGGGCACCTGGTGTGTAACCA...ATTAAAACTAGAACTATAGATCCACATGAACGCACGCCTGAGATTTGGCCACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS-3UTR CCA 90 bp | TTGTTGGGTCGAAGCCAGATGGGACACTGCTGTTCAAACAAAACACGGGTAATTTGGGCGTGCATGAGATaGGACATCACAGCTTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LLGRSQMGHCCSNKTRVIWACMR*DITASR Trigger: CCTGGAAGCTGTGATGTCCCATCTCATGCACGCCCA...AATTACCCGTGTTTTGTTTGAACAGCAGTGTCCCATCTGGCTTCGACCCAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS-3UTR CCA 90 bp | CCCAGGTTAATGAACTTTGTTGGGTCGAAGCCAGATGGGACACTGCTGTTCAAAGTGGTAATGCTCTTGTaGGCGTGCATGAGATGGGAC | + |
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Preference number: 4 (lower is better) Translates to: PRLMNFVGSKPDGTLLFKVVMLL*ACMRWD Trigger: GTCCCATCTCATGCACGCCCACAAGAGCATTACCAC...TTTGAACAGCAGTGTCCCATCTGGCTTCGACCCAACAAAGTTCATTAACCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS-3UTR CCA 90 bp | GGTCGAAGCCAGATGGGACACTGCTGTTCAAACAAAACACGGGTAATTGTGGGTTGGGTCGAAGCCAGATaGGACACTGCTGTTCAAACA | + |
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Preference number: 4 (lower is better) Translates to: GRSQMGHCCSNKTRVIVGWVEAR*DTAVQT Trigger: TGTTTGAACAGCAGTGTCCCATCTGGCTTCGACCCA...ACCCACAATTACCCGTGTTTTGTTTGAACAGCAGTGTCCCATCTGGCTTCGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS-3UTR TCA 90 bp | TTGTTGGGTCGAAGCCAGATGGGACACTGCTGTTCAAACAAAACACGGGTAATTTCTTGTGGGCGTGCATaGGATGGGACATCACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLGRSQMGHCCSNKTRVISCGRA*DGTSQL Trigger: AAGCTGTGATGTCCCATCTCATGCACGCCCACAAGA...AATTACCCGTGTTTTGTTTGAACAGCAGTGTCCCATCTGGCTTCGACCCAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS-3UTR CCA 90 bp | TTTGTTGGGTCGAAGCCAGATGGGACACTGCTGTTCAAACAAAACACGGGTAATCAGCAGCTCAACTTCTaGCGGCATTGGTTACACACC | + |
|
Preference number: 4 (lower is better) Translates to: FVGSKPDGTLLFKQNTGNQQLNF*RHWLHT Trigger: GGTGTGTAACCAATGCCGCCAGAAGTTGAGCTGCTG...ATTACCCGTGTTTTGTTTGAACAGCAGTGTCCCATCTGGCTTCGACCCAACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS-3UTR CCA 90 bp | GTTGAGGAGGGCTTCCGAGGGAAGCCACGTGTAAACGGGTCATCTGTACTAGTGAGGCGTGCGTTCATGTaGATCTATAGTTCTAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VEEGFRGKPRVNGSSVLVRRAFM*IYSSSF Trigger: AAAACTAGAACTATAGATCCACATGAACGCACGCCT...CACTAGTACAGATGACCCGTTTACACGTGGCTTCCCTCGGAAGCCCTCCTCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS-3UTR TCA 90 bp | TCTGCTGACAGTCACTGTGCTTTTGTCAATGTCAAGGGACCAATATGGGAAGGCCCATTCCTAACACACTaGTCTATAGAAGCCCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SADSHCAFVNVKGPIWEGPFLTH*SIEALC Trigger: GCACAGGGCTTCTATAGATCAGTGTGTTAGGAATGG...GCCTTCCCATATTGGTCCCTTGACATTGACAAAAGCACAGTGACTGTCAGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS-3UTR GCA 90 bp | GTAGAAAGACAAACAGTATCGGCAGAGGGCAACCTTAAAGCACCTTTAAAATCTGGTTTCTCCGTATGGTaGAGGGTCAGGGAACAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VERQTVSAEGNLKAPLKSGFSVW*RVREQP Trigger: GGGCTGTTCCCTGACCCTGCACCATACGGAGAAACC...AGATTTTAAAGGTGCTTTAAGGTTGCCCTCTGCCGATACTGTTTGTCTTTCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS-3UTR GCA 90 bp | TGTGCTTTTGTCAATGTCAAGGGACCAATATGGGAAGGCAGGCAGGAAGGGGCCATCTGCAAAAAGATGTaGTATGGCTGTGTCGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: CAFVNVKGPIWEGRQEGAICKKM*YGCVEN Trigger: GTTTTCGACACAGCCATAGCACATCTTTTTGCAGAT...GGCCCCTTCCTGCCTGCCTTCCCATATTGGTCCCTTGACATTGACAAAAGCACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS-3UTR GCA 90 bp | CCCATTCATCCCAGGTTAATGAACTTTGTTGGGTCGAAGCCAGATGGGACACTGAATGGCCATATGACTTaGTTTCCTAGGCAATCCACC | + |
|
Preference number: 4 (lower is better) Translates to: PIHPRLMNFVGSKPDGTLNGHMT*FPRQST Trigger: GGTGGATTGCCTAGGAAAGCAAGTCATATGGCCATT...CAGTGTCCCATCTGGCTTCGACCCAACAAAGTTCATTAACCTGGGATGAATGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS-3UTR CCA 90 bp | GTAAAGGAATCTGCTGACAGTCACTGTGCTTTTGTCAATGTCAAGGGACCAATAAACTTCTGGCGGCATTaGTTACACACCAGGTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: VKESADSHCAFVNVKGPINFWRH*LHTRCP Trigger: CGGGCACCTGGTGTGTAACCAATGCCGCCAGAAGTT...TATTGGTCCCTTGACATTGACAAAAGCACAGTGACTGTCAGCAGATTCCTTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS-3UTR TCA 90 bp | GTAGAAAGACAAACAGTATCGGCAGAGGGCAACCTTAAAGCACCTTTAAAATCTGCTTGCGGGTGCCAATaGGCAGGACGATGGCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VERQTVSAEGNLKAPLKSACGCQ*AGRWQK Trigger: TTTTTGCCATCGTCCTGCTCATTGGCACCCGCAAGC...AGATTTTAAAGGTGCTTTAAGGTTGCCCTCTGCCGATACTGTTTGTCTTTCTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS-3UTR TCA 90 bp | TTGGGTCGAAGCCAGATGGGACACTGCTGTTCAAACAAAACACGGGTAATTGTGGGTAATTGTGGGTCCTaGCTTGTGAAGACATATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LGRSQMGHCCSNKTRVIVGNCGS*LVKTYG Trigger: TCCATATGTCTTCACAAGTCAGGACCCACAATTACC...CACAATTACCCGTGTTTTGTTTGAACAGCAGTGTCCCATCTGGCTTCGACCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS-3UTR TCA 90 bp | CCCAGGTTAATGAACTTTGTTGGGTCGAAGCCAGATGGGACACTGCTGTTCAAAGGGGAAGTTAGGGGATaGAACAGTAGAAAGACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PRLMNFVGSKPDGTLLFKGEVRG*NSRKTN Trigger: GTTTGTCTTTCTACTGTTTCATCCCCTAACTTCCCC...TTTGAACAGCAGTGTCCCATCTGGCTTCGACCCAACAAAGTTCATTAACCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS-3UTR CCA 90 bp | ATCTGCAATTTTAAGATAAGCACTCCGGGTGATTCAGTGTCTATTAGCCAGCCATCTGGTTTCTCCGTATaGTGCAGGGTCAGGGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: ICNFKISTPGDSVSISQPSGFSV*CRVREQ Trigger: CTGTTCCCTGACCCTGCACCATACGGAGAAACCAGA...TGGCTGGCTAATAGACACTGAATCACCCGGAGTGCTTATCTTAAAATTGCAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS-3UTR CCA 90 bp | ACAAAAGTAAAGGAATCTGCTGACAGTCACTGTGCTTTTGTCAATGTCAAGGGAGTCAAGGGACCAATATaGGAAGGCAGGCAGGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TKVKESADSHCAFVNVKGVKGPI*EGRQEG Trigger: CCCTTCCTGCCTGCCTTCCCATATTGGTCCCTTGAC...TCCCTTGACATTGACAAAAGCACAGTGACTGTCAGCAGATTCCTTTACTTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS-3UTR GCA 90 bp | TTGTTGGGTCGAAGCCAGATGGGACACTGCTGTTCAAACAAAACACGGGTAATTTCTATAGAAGCCCTGTaGAACAGCCTGTCAAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLGRSQMGHCCSNKTRVISIEAL*NSLSSV Trigger: AACACTTGACAGGCTGTTGCACAGGGCTTCTATAGA...AATTACCCGTGTTTTGTTTGAACAGCAGTGTCCCATCTGGCTTCGACCCAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS-3UTR CCA 90 bp | TCTGCTGACAGTCACTGTGCTTTTGTCAATGTCAAGGGACCAATATGGGAAGGCTATGTCTTCATGTTCTaGTTTCTCCGTATGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SADSHCAFVNVKGPIWEGYVFMF*FLRMVQ Trigger: CTGCACCATACGGAGAAACCAGAACATGAAGACATA...GCCTTCCCATATTGGTCCCTTGACATTGACAAAAGCACAGTGACTGTCAGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS-3UTR CCA 90 bp | ACTGTTGAGGAGGGCTTCCGAGGGAAGCCACGTGTAAACGGGTCATCTGTACTAACGAAAGTCACATCATaGACAACATGTAGAAATAGT | + |
|
Preference number: 4 (lower is better) Translates to: TVEEGFRGKPRVNGSSVLTKVTS*TTCRNS Trigger: ACTATTTCTACATGTTGTCCATGATGTGACTTTCGT...TAGTACAGATGACCCGTTTACACGTGGCTTCCCTCGGAAGCCCTCCTCAACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS-3UTR CCA 90 bp | ATCTGCAATTTTAAGATAAGCACTCCGGGTGATTCAGTGTCTATTAGCCAGCCACAAAACATAGGTGAGTaGCCAAATCTCAGGCGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: ICNFKISTPGDSVSISQPQNIGE*PNLRRA Trigger: CGCACGCCTGAGATTTGGCCACTCACCTATGTTTTG...TGGCTGGCTAATAGACACTGAATCACCCGGAGTGCTTATCTTAAAATTGCAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS-3UTR GCA 90 bp | ACAAAAGTAAAGGAATCTGCTGACAGTCACTGTGCTTTTGTCAATGTCAAGGGAAGCCAGATGGGACACTaGTGTTCAAACAAAACACGG | + |
|
Preference number: 4 (lower is better) Translates to: TKVKESADSHCAFVNVKGSQMGH*CSNKTR Trigger: CCGTGTTTTGTTTGAACAGCAGTGTCCCATCTGGCT...TCCCTTGACATTGACAAAAGCACAGTGACTGTCAGCAGATTCCTTTACTTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS-3UTR TCA 90 bp | TCTGTACTAGTGGTGAGCAAAACTAATTACATGAGAACTATCAATGGCCATATGACGATGTCTTCTCCCTaGAGGGTGGTAATGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SVLVVSKTNYMRTINGHMTMSSP*RVVMLL Trigger: CAAGAGCATTACCACCCTTCAGGGAGAAGACATCGT...CATATGGCCATTGATAGTTCTCATGTAATTAGTTTTGCTCACCACTAGTACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS-3UTR CCA 90 bp | GAGTGGCCAAATCTCAGGCGTGCGTTCATGTGGATCTATAGTTCTAGTTTTAATCAAAAAGATGTGCTATaGCTGTGTCGAAAACAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EWPNLRRAFMWIYSSSFNQKDVL*LCRKQG Trigger: GCCTTGTTTTCGACACAGCCATAGCACATCTTTTTG...ATTAAAACTAGAACTATAGATCCACATGAACGCACGCCTGAGATTTGGCCACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS-3UTR TCA 90 bp | ACAAAAGTAAAGGAATCTGCTGACAGTCACTGTGCTTTTGTCAATGTCAAGGGAAGTAAAGGAATCTGCTaGCAGTCACTGTGCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TKVKESADSHCAFVNVKGSKGIC*QSLCFC Trigger: ACAAAAGCACAGTGACTGTCAGCAGATTCCTTTACT...TCCCTTGACATTGACAAAAGCACAGTGACTGTCAGCAGATTCCTTTACTTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS-3UTR GCA 90 bp | GTAGAAAGACAAACAGTATCGGCAGAGGGCAACCTTAAAGCACCTTTAAAATCTAAGGTTCCCATTATCTaGAAAAAGATGTGCTATGGC | + |
|
Preference number: 4 (lower is better) Translates to: VERQTVSAEGNLKAPLKSKVPII*KKMCYG Trigger: GCCATAGCACATCTTTTTGCAGATAATGGGAACCTT...AGATTTTAAAGGTGCTTTAAGGTTGCCCTCTGCCGATACTGTTTGTCTTTCTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS-3UTR CCA 90 bp | ATCTGCAATTTTAAGATAAGCACTCCGGGTGATTCAGTGTCTATTAGCCAGCCAAGCACCTTTAAAATCTaGACCCTTTCCCACAATTTA | + |
|
Preference number: 4 (lower is better) Translates to: ICNFKISTPGDSVSISQPSTFKI*TLSHNL Trigger: TAAATTGTGGGAAAGGGTCCAGATTTTAAAGGTGCT...TGGCTGGCTAATAGACACTGAATCACCCGGAGTGCTTATCTTAAAATTGCAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS-3UTR CCA 90 bp | GTAGAAAGACAAACAGTATCGGCAGAGGGCAACCTTAAAGCACCTTTAAAATCTCATGAGAACTATCAATaGCCATATGACTTGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VERQTVSAEGNLKAPLKSHENYQ*PYDLLS Trigger: GGAAAGCAAGTCATATGGCCATTGATAGTTCTCATG...AGATTTTAAAGGTGCTTTAAGGTTGCCCTCTGCCGATACTGTTTGTCTTTCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS-3UTR TCA 90 bp | ACAAAAGTAAAGGAATCTGCTGACAGTCACTGTGCTTTTGTCAATGTCAAGGGACTCAAACATTACTGTTaGAAAGAATCACCTGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: TKVKESADSHCAFVNVKGLKHYC*KESPDE Trigger: CTCATCAGGTGATTCTTTTCAACAGTAATGTTTGAG...TCCCTTGACATTGACAAAAGCACAGTGACTGTCAGCAGATTCCTTTACTTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS-3UTR TCA 90 bp | TCTGTACTAGTGGTGAGCAAAACTAATTACATGAGAACTATCAATGGCCATATGCTATCAATGGCCATATaGCTTGCTTTCCTAGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SVLVVSKTNYMRTINGHMLSMAI*LAFLGN Trigger: ATTGCCTAGGAAAGCAAGTCATATGGCCATTGATAG...CATATGGCCATTGATAGTTCTCATGTAATTAGTTTTGCTCACCACTAGTACAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS TCA 90 bp | CGGCGGAGACGCTCGGCGCCCGGCAGGCGGAGGGCTGGACCGCGCTaGTGCACTCCGCAGCCCCCGGCGTTCCGAGCACGCCTCCGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: RRRRSAPGRRRAGPR*CTPQPPAFRARLRV Trigger: GACGCGGAGGCGTGCTCGGAACGCCGGGGGCTGCGGAGTGCATCAGCGCGGTCCAGCCCTCCGCCTGCCGGGCGCCGAGCGTCTCCGCCG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS GCA 90 bp | GGGCGGCTCATCGCGCTCCGAACCAACCATGGAACTGCGGGCGCCTaGCTGCCGCGGGGCCGCCCGGGTCAAGGCGGTGCGCGCCCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: GRLIALRTNHGTAGA*LPRGRPGQGGARPA Trigger: CGCGGGGCGCGCACCGCCTTGACCCGGGCGGCCCCGCGGCAGGCAGGCGCCCGCAGTTCCATGGTTGGTTCGGAGCGCGATGAGCCGCCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS CCA 90 bp | CAGGTCCGGGCGGCGGAGACGCTCGGCGCCCGGCAGGCGGAGGGCTaGACCGCGCTGATGCACTCCGCAGCCCCCGGCGTTCCGAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: QVRAAETLGARQAEG*TALMHSAAPGVPST Trigger: CGTGCTCGGAACGCCGGGGGCTGCGGAGTGCATCAGCGCGGTCCAGCCCTCCGCCTGCCGGGCGCCGAGCGTCTCCGCCGCCCGGACCTG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS CCA 90 bp | GGGGCCGGTGGAGGACGGGCGGCTCATCGCGCTCCGAACCAACCATaGAACTGCGGGCGCCTGCCTGCCGCGGGGCCGCCCGGGTCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GAGGGRAAHRAPNQP*NCGRLPAAGPPGSR Trigger: CCTTGACCCGGGCGGCCCCGCGGCAGGCAGGCGCCCGCAGTTCCATGGTTGGTTCGGAGCGCGATGAGCCGCCCGTCCTCCACCGGCCCC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS CCA 90 bp | CTGGGCGTCAGGGCGCCCCTGCACGTCGGGCAGCAGCTCAACTTCTaGCGGCATTGGTTACACACCAGGTGCCCGGCCTGGCACCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LGVRAPLHVGQQLNF*RHWLHTRCPAWHRF Trigger: GAAGCGGTGCCAGGCCGGGCACCTGGTGTGTAACCAATGCCGCCAGAAGTTGAGCTGCTGCCCGACGTGCAGGGGCGCCCTGACGCCCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472885.1 |
||
| CDS CCA 90 bp | AGGGCGCCCCTGCACGTCGGGCAGCAGCTCAACTTCTGGCGGCATTaGTTACACACCAGGTGCCCGGCCTGGCACTGGCTCGCTGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RAPLHVGQQLNFWRH*LHTRCPAWHWLAAA Trigger: GGCTGCAGCGAGCCAGTGCCAGGCCGGGCACCTGGTGTGTAACCAATGCCGCCAGAAGTTGAGCTGCTGCCCGACGTGCAGGGGCGCCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482706.1 |
||
| CDS CCA 90 bp | CTGGGCGTCAGGGCGCCCCTGCACGTCGGGCAGCAGCTCAACTTCTaGCGGCATTGGTTACACACCAGGTGCCCGGCCTGGCACTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LGVRAPLHVGQQLNF*RHWLHTRCPAWHWL Trigger: GAGCCAGTGCCAGGCCGGGCACCTGGTGTGTAACCAATGCCGCCAGAAGTTGAGCTGCTGCCCGACGTGCAGGGGCGCCCTGACGCCCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482706.1 |
||
| CDS CCA 90 bp | CTGGGCGTCAGGGCGCCCCTGCACGTCGGGCAGCAGCTCAACTTCTaGCGGCATTGGTTACACACCAGGTGCCCGGCCTGGCACTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LGVRAPLHVGQQLNF*RHWLHTRCPAWHCR Trigger: TCTGCAGTGCCAGGCCGGGCACCTGGTGTGTAACCAATGCCGCCAGAAGTTGAGCTGCTGCCCGACGTGCAGGGGCGCCCTGACGCCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS CCA 90 bp | AGGGCGCCCCTGCACGTCGGGCAGCAGCTCAACTTCTGGCGGCATTaGTTACACACCAGGTGCCCGGCCTGGCACCGCTTCTGGAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: RAPLHVGQQLNFWRH*LHTRCPAWHRFWNS Trigger: GCTGTTCCAGAAGCGGTGCCAGGCCGGGCACCTGGTGTGTAACCAATGCCGCCAGAAGTTGAGCTGCTGCCCGACGTGCAGGGGCGCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472885.1 |
||
| CDS CCA 90 bp | AGGGCGCCCCTGCACGTCGGGCAGCAGCTCAACTTCTGGCGGCATTaGTTACACACCAGGTGCCCGGCCTGGCACTGCAGAATAGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RAPLHVGQQLNFWRH*LHTRCPAWHCRIGG Trigger: GCCTCCTATTCTGCAGTGCCAGGCCGGGCACCTGGTGTGTAACCAATGCCGCCAGAAGTTGAGCTGCTGCCCGACGTGCAGGGGCGCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS TCA 90 bp | AAAACAAGGCAGTCGCTGTTCATGATGGCCGCAGCCACACCGTCATaGATCGAACGGGGCGTGGCCTCCCAGGTCAATCTCCGCCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KTRQSLFMMAAATPS*IERGVASQVNLRRF Trigger: GAACCGGCGGAGATTGACCTGGGAGGCCACGCCCCGTTCGATTCATGACGGTGTGGCTGCGGCCATCATGAACAGCGACTGCCTTGTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS TCA 90 bp | AAAGATGTGCTATGGCTGTGTCGAAAACAAGGCAGTCGCTGTTCATaGTGGCCGCAGCCACACCGTCATGAATCGAACGGGGCGTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: KDVLWLCRKQGSRCS*WPQPHRHESNGAWP Trigger: AGGCCACGCCCCGTTCGATTCATGACGGTGTGGCTGCGGCCATCATGAACAGCGACTGCCTTGTTTTCGACACAGCCATAGCACATCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS-3UTR CAA 90 bp | CCCATTCATCCCAGGTTAATGAACTTTGTTGGGTCGAAGCCAGATGGGACACTGTGCGGCGGCGGCTGCTaGCTGCAGGGTTTATTAGCG | + |
|
Preference number: 5 (lower is better) Translates to: PIHPRLMNFVGSKPDGTLCGGGC*LQGLLA Trigger: CGCTAATAAACCCTGCAGCAAGCAGCCGCCGCCGCA...CAGTGTCCCATCTGGCTTCGACCCAACAAAGTTCATTAACCTGGGATGAATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS-3UTR CAA 90 bp | TGCTTTTGTCAATGTCAAGGGACCAATATGGGAAGGCAGGCAGGAAGGGGCCTCGGCAAAGTTCTCGGCTaGCTTGCGGGTGCCAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: CFCQCQGTNMGRQAGRGLGKVLG*LAGANE Trigger: CTCATTGGCACCCGCAAGCAAGCCGAGAACTTTGCC...GAGGCCCCTTCCTGCCTGCCTTCCCATATTGGTCCCTTGACATTGACAAAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS-3UTR CAA 90 bp | TTGGGTCGAAGCCAGATGGGACACTGCTGTTCAAACAAAACACGGGTAATTGTGCAACTTCTGGCGGCATaGGTTACACACCAGGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LGRSQMGHCCSNKTRVIVQLLAA*VTHQVP Trigger: GGGCACCTGGTGTGTAACCAATGCCGCCAGAAGTTG...CACAATTACCCGTGTTTTGTTTGAACAGCAGTGTCCCATCTGGCTTCGACCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS-3UTR CAA 90 bp | CCCAGGTTAATGAACTTTGTTGGGTCGAAGCCAGATGGGACACTGCTGTTCAAATCACACCAGCTACTGTaGAGGAGGGCTTCCGAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PRLMNFVGSKPDGTLLFKSHQLL*RRASEG Trigger: TCCCTCGGAAGCCCTCCTCAACAGTAGCTGGTGTGA...TTTGAACAGCAGTGTCCCATCTGGCTTCGACCCAACAAAGTTCATTAACCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS GCA 90 bp | GGACGGTATTCACATATGTCTTCATGTTCTGGTTTCTCCGTATGGTaGAGGGTCAGGGAACAGCCCGTGGTGGCATACTTACAGGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: GRYSHMSSCSGFSVW*RVREQPVVAYLQGN Trigger: GTTTCCCTGTAAGTATGCCACCACGGGCTGTTCCCTGACCCTGCACCATACGGAGAAACCAGAACATGAAGACATATGTGAATACCGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000312960.4 ENST00000482706.1 |
||
| CDS-3UTR CAA 90 bp | TTGTTGGGTCGAAGCCAGATGGGACACTGCTGTTCAAACAAAACACGGGTAATTAAGTTCTCGGCTTGCTaGCGGGTGCCAATGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLGRSQMGHCCSNKTRVIKFSAC*RVPMSR Trigger: CCTGCTCATTGGCACCCGCAAGCAAGCCGAGAACTT...AATTACCCGTGTTTTGTTTGAACAGCAGTGTCCCATCTGGCTTCGACCCAACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS-3UTR CAA 90 bp | GTAGAAAGACAAACAGTATCGGCAGAGGGCAACCTTAAAGCACCTTTAAAATCTAGGGACCCCTGCCACTaGCAGGAAGCACCAGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: VERQTVSAEGNLKAPLKSRDPCH*QEAPGH Trigger: ATGTCCTGGTGCTTCCTGCAAGTGGCAGGGGTCCCT...AGATTTTAAAGGTGCTTTAAGGTTGCCCTCTGCCGATACTGTTTGTCTTTCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312960.4 |
||
| CDS-3UTR CAA 90 bp | TCTGCTGACAGTCACTGTGCTTTTGTCAATGTCAAGGGACCAATATGGGAAGGCGCCTTCGTACTTCTCTaGTTTCTCCAGCACCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: SADSHCAFVNVKGPIWEGAFVLL*FLQHQH Trigger: ATGCTGGTGCTGGAGAAACAAGAGAAGTACGAAGGC...GCCTTCCCATATTGGTCCCTTGACATTGACAAAAGCACAGTGACTGTCAGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS-3UTR CAA 90 bp | ATCTGCAATTTTAAGATAAGCACTCCGGGTGATTCAGTGTCTATTAGCCAGCCAAGGGTGGTAATGCTCTaGTGGGCGTGCATGAGATGG | + |
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Preference number: 5 (lower is better) Translates to: ICNFKISTPGDSVSISQPRVVML*WACMRW Trigger: CCATCTCATGCACGCCCACAAGAGCATTACCACCCT...TGGCTGGCTAATAGACACTGAATCACCCGGAGTGCTTATCTTAAAATTGCAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS-3UTR CAA 90 bp | GTAAAGGAATCTGCTGACAGTCACTGTGCTTTTGTCAATGTCAAGGGACCAATAGATGAGACTGTTAAATaGGCAGGCTCCCTAAATCTG | + |
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Preference number: 5 (lower is better) Translates to: VKESADSHCAFVNVKGPIDETVK*AGSLNL Trigger: CAGATTTAGGGAGCCTGCCAATTTAACAGTCTCATC...TATTGGTCCCTTGACATTGACAAAAGCACAGTGACTGTCAGCAGATTCCTTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS TCA 72 bp | CGCTCGGCGCCCGGCAGGCGGAGGGCTGGACCGCGCTaGTGCACTCCGCAGCCCCCGGCGTTCCGAGCACGC | + |
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Preference number: 6 (lower is better) Translates to: RSAPGRRRAGPR*CTPQPPAFRAR Trigger: GCGTGCTCGGAACGCCGGGGGCTGCGGAGTGCATCAGCGCGGTCCAGCCCTCCGCCTGCCGGGCGCCGAGCG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS CCA 72 bp | GCGGCGGAGACGCTCGGCGCCCGGCAGGCGGAGGGCTaGACCGCGCTGATGCACTCCGCAGCCCCCGGCGTT | + |
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Preference number: 6 (lower is better) Translates to: AAETLGARQAEG*TALMHSAAPGV Trigger: AACGCCGGGGGCTGCGGAGTGCATCAGCGCGGTCCAGCCCTCCGCCTGCCGGGCGCCGAGCGTCTCCGCCGC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS GCA 72 bp | CCTCCCGGCGGCGTCCCGGGCCCCGAACCCCAGCGGTaGGCAGAGCCCTGGCCCACCCGCTTCTGGAACAGC | + |
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Preference number: 6 (lower is better) Translates to: PPGGVPGPEPQR*AEPWPTRFWNS Trigger: GCTGTTCCAGAAGCGGGTGGGCCAGGGCTCTGCGCACCGCTGGGGTTCGGGGCCCGGGACGCCGCCGGGAGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS GCA 72 bp | CGCTCCGAACCAACCATGGAACTGCGGGCGCCTGCCTaGCGCGGGGCCGCCCGGGTCAAGGCGGTGCGCGCC | + |
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Preference number: 6 (lower is better) Translates to: RSEPTMELRAPA*RGAARVKAVRA Trigger: GGCGCGCACCGCCTTGACCCGGGCGGCCCCGCGGCAGGCAGGCGCCCGCAGTTCCATGGTTGGTTCGGAGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS TCA 72 bp | GCTTCCTGCTCGGGCTGCGGGCCGGGCCTGCGCCAGTaGGCATGCCTGGCTCGCTGCAGCCCCGCGGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: ASCSGCGPGLRQ*ACLARCSPAGL Trigger: CAACCCCGCGGGGCTGCAGCGAGCCAGGCATGCTCACTGGCGCAGGCCCGGCCCGCAGCCCGAGCAGGAAGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000472885.1 |
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| CDS GCA 72 bp | ATCGCGCTCCGAACCAACCATGGAACTGCGGGCGCCTaGCTGCCGCGGGGCCGCCCGGGTCAAGGCGGTGCG | + |
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Preference number: 6 (lower is better) Translates to: IALRTNHGTAGA*LPRGRPGQGGA Trigger: CGCACCGCCTTGACCCGGGCGGCCCCGCGGCAGGCAGGCGCCCGCAGTTCCATGGTTGGTTCGGAGCGCGAT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS CAA 90 bp | CAGGGCGCCCCTGCACGTCGGGCAGCAGCTCAACTTCTGGCGGCATaGGTTACACACCAGGTGCCCGGCCTGGCACTGGCTCGCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: QGAPARRAAAQLLAA*VTHQVPGLALARCS Trigger: GCTGCAGCGAGCCAGTGCCAGGCCGGGCACCTGGTGTGTAACCAATGCCGCCAGAAGTTGAGCTGCTGCCCGACGTGCAGGGGCGCCCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482706.1 |
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| CDS GCA 72 bp | CAGCTCAACTTCTGGCGGCATTGGTTACACACCAGGTaGCCGGCCTGGCACTGGCTCGCTGCAGCCCCGCGG | + |
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Preference number: 6 (lower is better) Translates to: QLNFWRHWLHTR*PAWHWLAAAPR Trigger: CCGCGGGGCTGCAGCGAGCCAGTGCCAGGCCGGGCACCTGGTGTGTAACCAATGCCGCCAGAAGTTGAGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482706.1 |
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| CDS CCA 72 bp | AGGGCGCCCCTGCACGTCGGGCAGCAGCTCAACTTCTaGCGGCATTGGTTACACACCAGGTGCCCGGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: RAPLHVGQQLNF*RHWLHTRCPAW Trigger: CCAGGCCGGGCACCTGGTGTGTAACCAATGCCGCCAGAAGTTGAGCTGCTGCCCGACGTGCAGGGGCGCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000312960.4 ENST00000472885.1 ENST00000482706.1 |
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| CDS CAA 90 bp | CAGGGCGCCCCTGCACGTCGGGCAGCAGCTCAACTTCTGGCGGCATaGGTTACACACCAGGTGCCCGGCCTGGCACCGCTTCTGGAACAG | + |
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Preference number: 6 (lower is better) Translates to: QGAPARRAAAQLLAA*VTHQVPGLAPLLEQ Trigger: CTGTTCCAGAAGCGGTGCCAGGCCGGGCACCTGGTGTGTAACCAATGCCGCCAGAAGTTGAGCTGCTGCCCGACGTGCAGGGGCGCCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472885.1 |
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| CDS CAA 90 bp | CAGGGCGCCCCTGCACGTCGGGCAGCAGCTCAACTTCTGGCGGCATaGGTTACACACCAGGTGCCCGGCCTGGCACTGCAGAATAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: QGAPARRAAAQLLAA*VTHQVPGLALQNRR Trigger: CCTCCTATTCTGCAGTGCCAGGCCGGGCACCTGGTGTGTAACCAATGCCGCCAGAAGTTGAGCTGCTGCCCGACGTGCAGGGGCGCCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS CCA 72 bp | CTGCACGTCGGGCAGCAGCTCAACTTCTGGCGGCATTaGTTACACACCAGGTGCCCGGCCTGGCACCGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LHVGQQLNFWRH*LHTRCPAWHRF Trigger: GAAGCGGTGCCAGGCCGGGCACCTGGTGTGTAACCAATGCCGCCAGAAGTTGAGCTGCTGCCCGACGTGCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472885.1 |
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| CDS CCA 72 bp | CTGCACGTCGGGCAGCAGCTCAACTTCTGGCGGCATTaGTTACACACCAGGTGCCCGGCCTGGCACTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: LHVGQQLNFWRH*LHTRCPAWHWL Trigger: GAGCCAGTGCCAGGCCGGGCACCTGGTGTGTAACCAATGCCGCCAGAAGTTGAGCTGCTGCCCGACGTGCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482706.1 |
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| CDS CAA 72 bp | CCTGCACGTCGGGCAGCAGCTCAACTTCTGGCGGCATaGGTTACACACCAGGTGCCCGGCCTGGCACTGCAG | + |
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Preference number: 6 (lower is better) Translates to: PARRAAAQLLAA*VTHQVPGLALQ Trigger: CTGCAGTGCCAGGCCGGGCACCTGGTGTGTAACCAATGCCGCCAGAAGTTGAGCTGCTGCCCGACGTGCAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS CAA 72 bp | CCTGCACGTCGGGCAGCAGCTCAACTTCTGGCGGCATaGGTTACACACCAGGTGCCCGGCCTGGCACCGCTT | + |
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Preference number: 6 (lower is better) Translates to: PARRAAAQLLAA*VTHQVPGLAPL Trigger: AAGCGGTGCCAGGCCGGGCACCTGGTGTGTAACCAATGCCGCCAGAAGTTGAGCTGCTGCCCGACGTGCAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472885.1 |
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| CDS CAA 72 bp | CCTGCACGTCGGGCAGCAGCTCAACTTCTGGCGGCATaGGTTACACACCAGGTGCCCGGCCTGGCACTGGCT | + |
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Preference number: 6 (lower is better) Translates to: PARRAAAQLLAA*VTHQVPGLALA Trigger: AGCCAGTGCCAGGCCGGGCACCTGGTGTGTAACCAATGCCGCCAGAAGTTGAGCTGCTGCCCGACGTGCAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482706.1 |
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| CDS CCA 72 bp | CTGCACGTCGGGCAGCAGCTCAACTTCTGGCGGCATTaGTTACACACCAGGTGCCCGGCCTGGCACTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: LHVGQQLNFWRH*LHTRCPAWHCR Trigger: TCTGCAGTGCCAGGCCGGGCACCTGGTGTGTAACCAATGCCGCCAGAAGTTGAGCTGCTGCCCGACGTGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS CCA 72 bp | TGGCCGCAGCCACACCGTCATGAATCGAACGGGGCGTaGCCTCCCAGGTCAATCTCCGCCGGTTCCCATTCA | + |
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Preference number: 6 (lower is better) Translates to: WPQPHRHESNGA*PPRSISAGSHS Trigger: TGAATGGGAACCGGCGGAGATTGACCTGGGAGGCCACGCCCCGTTCGATTCATGACGGTGTGGCTGCGGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS TCA 72 bp | CAGTCGCTGTTCATGATGGCCGCAGCCACACCGTCATaGATCGAACGGGGCGTGGCCTCCCAGGTCAATCTC | + |
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Preference number: 6 (lower is better) Translates to: QSLFMMAAATPS*IERGVASQVNL Trigger: GAGATTGACCTGGGAGGCCACGCCCCGTTCGATTCATGACGGTGTGGCTGCGGCCATCATGAACAGCGACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS TCA 72 bp | CTATGGCTGTGTCGAAAACAAGGCAGTCGCTGTTCATaGTGGCCGCAGCCACACCGTCATGAATCGAACGGG | + |
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Preference number: 6 (lower is better) Translates to: LWLCRKQGSRCS*WPQPHRHESNG Trigger: CCCGTTCGATTCATGACGGTGTGGCTGCGGCCATCATGAACAGCGACTGCCTTGTTTTCGACACAGCCATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS CAA 72 bp | CCCATTCAACTCCAGTCTGTAGGCAAAGTTCTCGGCTaGCTTGCGGGTGCCAATGAGCAGGACGATGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: PIQLQSVGKVLG*LAGANEQDDGK Trigger: TTTGCCATCGTCCTGCTCATTGGCACCCGCAAGCAAGCCGAGAACTTTGCCTACAGACTGGAGTTGAATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312960.4 |
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| CDS CCA 72 bp | TATTCACATATGTCTTCATGTTCTGGTTTCTCCGTATaGTGCAGGGTCAGGGAACAGCCCGTGGTGGCATAC | + |
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Preference number: 6 (lower is better) Translates to: YSHMSSCSGFSV*CRVREQPVVAY Trigger: GTATGCCACCACGGGCTGTTCCCTGACCCTGCACCATACGGAGAAACCAGAACATGAAGACATATGTGAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000312960.4 ENST00000482706.1 |
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