RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SIAE (Homo sapiens)

Ensembl gene IDs: ENSG00000110013

Ensembl transcript IDs: ENST00000263593.8, ENST00000436137.2, ENST00000525730.1, ENST00000533613.1, ENST00000545756.5, ENST00000618733.4

Found 296 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAGGTGAAAGGAATCTGGACTTAGAGTTCTTGGCTACCTCTGGCTaGCCCCGAATTAGAACAGCCCATGGGGGTATGTGTATTGGGAGT +
Preference number: 1 (lower is better)
Translates to: GGERNLDLEFLATSG*PRIRTAHGGMCIGS
Trigger: ACTCCCAATACACATACCCCCATGGGCTGTTCTAATTCGGGGGCAGCCAGAGGTAGCCAAGAACTCTAAGTCCAGATTCCTTTCACCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263593.8
3UTR TCA 90 bp CCATGGGGGTATGTGTATTGGGAGTGGAGGAGTGGACGGGTAGATTaGCTTTTTCTCAGGCATCAATCTGTTACAAGGTTCATGGTTTCT +
Preference number: 1 (lower is better)
Translates to: PWGYVYWEWRSGRVD*LFLRHQSVTRFMVS
Trigger: AGAAACCATGAACCTTGTAACAGATTGATGCCTGAGAAAAAGTCAATCTACCCGTCCACTCCTCCACTCCCAATACACATACCCCCATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263593.8
3UTR CCA 90 bp GAATTAGAACAGCCCATGGGGGTATGTGTATTGGGAGTGGAGGAGTaGACGGGTAGATTGACTTTTTCTCAGGCATCAATCTGTTACAAG +
Preference number: 1 (lower is better)
Translates to: ELEQPMGVCVLGVEE*TGRLTFSQASICYK
Trigger: CTTGTAACAGATTGATGCCTGAGAAAAAGTCAATCTACCCGTCCACTCCTCCACTCCCAATACACATACCCCCATGGGCTGTTCTAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263593.8
3UTR CCA 90 bp TGGGAGAAATTTTATAAAGAACACATGAACACTAGCTGGCCTATGTaGCCTTTAAAATCTCTTCCAATCCTGAGATTCCCACAACTCTGG +
Preference number: 1 (lower is better)
Translates to: WEKFYKEHMNTSWPM*PLKSLPILRFPQLW
Trigger: CCAGAGTTGTGGGAATCTCAGGATTGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTCTTTATAAAATTTCTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
3UTR-3UTR CCA 90 bp CCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGCCTCCTGTTCCTGGCACCCAAGTGCCTTCGCTaGGCTACTCCCACCTGGCCC +
Preference number: 2 (lower is better)
Translates to: PCVHVFLSQSFPRLLFLAPKCLR*ATPTWP
Trigger: GGGCCAGGTGGGAGTAGCCCAGCGAAGGCACTTGGG...TGCCAGGAACAGGAGGCGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
3UTR-3UTR TCA 90 bp CAGCCCAAGTGCCTTCGCTGGGCTACTCCCACCTGGCCCTTGCTTTTCATTCCTACGGCCATATCACCCTaGACGCGCCTGATCTCATCT +
Preference number: 2 (lower is better)
Translates to: QPKCLRWATPTWPLLFIPTAISP*TRLISS
Trigger: AGATGAGATCAGGCGCGTTCAGGGTGATATGGCCGT...AGGAATGAAAAGCAAGGGCCAGGTGGGAGTAGCCCAGCGAAGGCACTTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
3UTR-3UTR CCA 90 bp TATTCCTGCTGTTTGGAGCTACACCAGAACCCCTTGGAACTCTACAGAGGGGTACCCAAGTGCCTTCGCTaGGCTACTCCCACCTGGCCC +
Preference number: 2 (lower is better)
Translates to: YSCCLELHQNPLELYRGVPKCLR*ATPTWP
Trigger: GGGCCAGGTGGGAGTAGCCCAGCGAAGGCACTTGGG...TACCCCTCTGTAGAGTTCCAAGGGGTTCTGGTGTAGCTCCAAACAGCAGGAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263593.8
3UTR-3UTR GCA 90 bp TCGAACAACAGTTTGCCTCTGTTGCCCCTGTGTTCATGTTTTCCTAAGCCAGAGTCCTGGCAGCCCAAGTaGCTTCGCTGGGCTACTCCC +
Preference number: 2 (lower is better)
Translates to: SNNSLPLLPLCSCFPKPESWQPK*LRWATP
Trigger: GGGAGTAGCCCAGCGAAGGCACTTGGGCTGCCAGGA...CTCTGGCTTAGGAAAACATGAACACAGGGGCAACAGAGGCAAACTGTTGTTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
3UTR-3UTR TCA 90 bp AGTTTGCCTCTGTTGCCCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGCACCCTGAACGCGCCTaGTCTCATCTGATCTCGGAA +
Preference number: 2 (lower is better)
Translates to: SLPLLPLCSCFPKPEFPTHPERA*SHLISE
Trigger: TTCCGAGATCAGATGAGATCAGGCGCGTTCAGGGTG...CGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGGGCAACAGAGGCAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
3UTR-3UTR CCA 90 bp AGTTTGCCTCTGTTGCCCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGAAGCAGGGTCGGGCCTaGTTAGTACTTGGATGGGAG +
Preference number: 2 (lower is better)
Translates to: SLPLLPLCSCFPKPEFPTKQGRA*LVLGWE
Trigger: CTCCCATCCAAGTACTAACCAGGCCCGACCCTGCTT...CGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGGGCAACAGAGGCAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
3UTR CAA 90 bp CCCATGGGGGTATGTGTATTGGGAGTGGAGGAGTGGACGGGTAGATaGACTTTTTCTCAGGCATCAATCTGTTACAAGGTTCATGGTTTC +
Preference number: 2 (lower is better)
Translates to: PMGVCVLGVEEWTGR*TFSQASICYKVHGF
Trigger: GAAACCATGAACCTTGTAACAGATTGATGCCTGAGAAAAAGTCAATCTACCCGTCCACTCCTCCACTCCCAATACACATACCCCCATGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263593.8
3UTR-3UTR TCA 90 bp CCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGCCTCCTGTTCCTGGCACTGAAAGCCATTCAATaGGGCTTTCTATTAATTTCC +
Preference number: 2 (lower is better)
Translates to: PCVHVFLSQSFPRLLFLALKAIQ*GFLLIS
Trigger: GGAAATTAATAGAAAGCCTCATTGAATGGCTTTCAG...TGCCAGGAACAGGAGGCGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
3UTR-3UTR TCA 90 bp CTAAATAAAATCTTGGCACTGACAAAGTTATTCCTGCTGTTTGGAGCTACACCACACCCTGAACGCGCCTaGTCTCATCTGATCTCGGAA +
Preference number: 2 (lower is better)
Translates to: LNKILALTKLFLLFGATPHPERA*SHLISE
Trigger: TTCCGAGATCAGATGAGATCAGGCGCGTTCAGGGTG...TGGTGTAGCTCCAAACAGCAGGAATAACTTTGTCAGTGCCAAGATTTTATTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263593.8
3UTR CAA 90 bp AAGAGCCTGAGATTTATATTTAACTCGAACAACAGTTTGCCTCTGTaGCCCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGCCT +
Preference number: 2 (lower is better)
Translates to: KSLRFIFNSNNSLPL*PLCSCFPKPEFPTP
Trigger: AGGCGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGGGCAACAGAGGCAAACTGTTGTTCGAGTTAAATATAAATCTCAGGCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
3UTR-3UTR TCA 90 bp TCGAACAACAGTTTGCCTCTGTTGCCCCTGTGTTCATGTTTTCCTAAGCCAGAGGAATTGGTTTGGGCTTaGAGAGAATACAAAGAGATC +
Preference number: 2 (lower is better)
Translates to: SNNSLPLLPLCSCFPKPEELVWA*REYKEI
Trigger: GATCTCTTTGTATTCTCTTCAAGCCCAAACCAATTC...CTCTGGCTTAGGAAAACATGAACACAGGGGCAACAGAGGCAAACTGTTGTTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
3UTR-3UTR TCA 90 bp ATTGAGGTCCAATTTGTCTGTAGTTCAGAATTAGTCCAATACAGACCCTTAGACCAGCCATGTGCTAGCTaGAAGCCATTCAATGAGGCT +
Preference number: 2 (lower is better)
Translates to: IEVQFVCSSELVQYRPLDQPCAS*KPFNEA
Trigger: AGCCTCATTGAATGGCTTTCAGCTAGCACATGGCTG...GTCTAAGGGTCTGTATTGGACTAATTCTGAACTACAGACAAATTGGACCTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
3UTR-3UTR TCA 90 bp GAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCAATCCTGCTGAAAGCCATTCAATaGGGCTTTCTATTAATTTCC +
Preference number: 2 (lower is better)
Translates to: EHMNTSWPMWPLKSLPILLKAIQ*GFLLIS
Trigger: GGAAATTAATAGAAAGCCTCATTGAATGGCTTTCAG...CAGGATTGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
3UTR CAA 90 bp TTACCTTTAAAGAGCCTGAGATTTATATTTAACTCGAACAACAGTTaGCCTCTGTTGCCCCTGTGTTCATGTTTTCCTAAGCCAGAGTTT +
Preference number: 2 (lower is better)
Translates to: LPLKSLRFIFNSNNS*PLLPLCSCFPKPEF
Trigger: AAACTCTGGCTTAGGAAAACATGAACACAGGGGCAACAGAGGCAAACTGTTGTTCGAGTTAAATATAAATCTCAGGCTCTTTAAAGGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
3UTR-3UTR TCA 90 bp TACAGACCCTTAGACCAACTAGGGAACAAAAAGCAAGCATTTCAAGTTACCTATCTAAATGCTAAAATCTaGAGGACCCATCCTTATATC +
Preference number: 2 (lower is better)
Translates to: YRPLDQLGNKKQAFQVTYLNAKI*RTHPYI
Trigger: GATATAAGGATGGGTCCTTCAGATTTTAGCATTTAG...ATAGGTAACTTGAAATGCTTGCTTTTTGTTCCCTAGTTGGTCTAAGGGTCTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
3UTR-3UTR TCA 90 bp AACAGCCATGTGCTAGCTGAAAGCCATTCAATGAGGCTTTCTATTAATTTCCTTCTAAATGCTAAAATCTaGAGGACCCATCCTTATATC +
Preference number: 2 (lower is better)
Translates to: NSHVLAESHSMRLSINFLLNAKI*RTHPYI
Trigger: GATATAAGGATGGGTCCTTCAGATTTTAGCATTTAG...AAGGAAATTAATAGAAAGCCTCATTGAATGGCTTTCAGCTAGCACATGGCTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
3UTR GCA 72 bp AGGAATCTGGACTTAGAGTTCTTGGCTACCTCTGGCTaGCCCCGAATTAGAACAGCCCATGGGGGTATGTGT +
Preference number: 3 (lower is better)
Translates to: RNLDLEFLATSG*PRIRTAHGGMC
Trigger: ACACATACCCCCATGGGCTGTTCTAATTCGGGGGCAGCCAGAGGTAGCCAAGAACTCTAAGTCCAGATTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263593.8
3UTR CCA 72 bp CAGCCCATGGGGGTATGTGTATTGGGAGTGGAGGAGTaGACGGGTAGATTGACTTTTTCTCAGGCATCAATC +
Preference number: 3 (lower is better)
Translates to: QPMGVCVLGVEE*TGRLTFSQASI
Trigger: GATTGATGCCTGAGAAAAAGTCAATCTACCCGTCCACTCCTCCACTCCCAATACACATACCCCCATGGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263593.8
3UTR CCA 72 bp GGTTTACTCTATCACCTAACACCTCAACACTACCTGTaGGATGCCTTAGTTACCCAGCAGCAGGTTACCAAG +
Preference number: 3 (lower is better)
Translates to: GLLYHLTPQHYL*DALVTQQQVTK
Trigger: CTTGGTAACCTGCTGCTGGGTAACTAAGGCATCCCACAGGTAGTGTTGAGGTGTTAGGTGATAGAGTAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263593.8
3UTR CCA 72 bp TCAGGCATCAATCTGTTACAAGGTTCATGGTTTCTATaGGGCCAGATGCATGAGAGGTCAAAGCATGGGCAA +
Preference number: 3 (lower is better)
Translates to: SGINLLQGSWFL*GQMHERSKHGQ
Trigger: TTGCCCATGCTTTGACCTCTCATGCATCTGGCCCCATAGAAACCATGAACCTTGTAACAGATTGATGCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263593.8
3UTR-3UTR CAA 90 bp AGTTTGCCTCTGTTGCCCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGAGAATTGGTTTGGGCTaGAAGAGAATACAAAGAGAT +
Preference number: 3 (lower is better)
Translates to: SLPLLPLCSCFPKPEFPTRIGLG*KRIQRD
Trigger: ATCTCTTTGTATTCTCTTCAAGCCCAAACCAATTCT...CGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGGGCAACAGAGGCAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
3UTR TCA 72 bp TATGTGTATTGGGAGTGGAGGAGTGGACGGGTAGATTaGCTTTTTCTCAGGCATCAATCTGTTACAAGGTTC +
Preference number: 3 (lower is better)
Translates to: YVYWEWRSGRVD*LFLRHQSVTRF
Trigger: GAACCTTGTAACAGATTGATGCCTGAGAAAAAGTCAATCTACCCGTCCACTCCTCCACTCCCAATACACATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263593.8
3UTR CCA 72 bp GACTTTTTCTCAGGCATCAATCTGTTACAAGGTTCATaGTTTCTATGGGGCCAGATGCATGAGAGGTCAAAG +
Preference number: 3 (lower is better)
Translates to: DFFSGINLLQGS*FLWGQMHERSK
Trigger: CTTTGACCTCTCATGCATCTGGCCCCATAGAAACCATGAACCTTGTAACAGATTGATGCCTGAGAAAAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263593.8
3UTR TCA 72 bp ATGAATGTGCATGGCGTCATTAACATAATCATTGCCTaGACCGTATTTTTCACACTATGTACTCTAGGTTCC +
Preference number: 3 (lower is better)
Translates to: MNVHGVINIIIA*TVFFTLCTLGS
Trigger: GGAACCTAGAGTACATAGTGTGAAAAATACGGTTCAGGCAATGATTATGTTAATGACGCCATGCACATTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR GCA 90 bp CAGCCCAAGTGCCTTCGCTGGGCTACTCCCACCTGGCCCTTGCTTTTCATTCCTTCCTGGCAGCCCAAGTaGCTTCGCTGGGCTACTCCC +
Preference number: 4 (lower is better)
Translates to: QPKCLRWATPTWPLLFIPSWQPK*LRWATP
Trigger: GGGAGTAGCCCAGCGAAGGCACTTGGGCTGCCAGGA...AGGAATGAAAAGCAAGGGCCAGGTGGGAGTAGCCCAGCGAAGGCACTTGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp CCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGCCTCCTGTTCCTGGCAGTGTCCCGCCCCAGCTaGAGGCGATCAGCCCGATGG +
Preference number: 4 (lower is better)
Translates to: PCVHVFLSQSFPRLLFLAVSRPS*RRSARW
Trigger: CCATCGGGCTGATCGCCTCCAGCTGGGGCGGGACAC...TGCCAGGAACAGGAGGCGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR TCA 90 bp CAGCCCAAGTGCCTTCGCTGGGCTACTCCCACCTGGCCCTTGCTTTTCATTCCTTTCATGATGGTTTCCTaGCCTTGGCGCAGGGTCACG +
Preference number: 4 (lower is better)
Translates to: QPKCLRWATPTWPLLFIPFMMVS*PWRRVT
Trigger: CGTGACCCTGCGCCAAGGTCAGGAAACCATCATGAA...AGGAATGAAAAGCAAGGGCCAGGTGGGAGTAGCCCAGCGAAGGCACTTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR TCA 90 bp CAGCCCAAGTGCCTTCGCTGGGCTACTCCCACCTGGCCCTTGCTTTTCATTCCTGCAACCACAGTGCCATaGCAAGAATCGATCGCCAGG +
Preference number: 4 (lower is better)
Translates to: QPKCLRWATPTWPLLFIPATTVP*QESIAR
Trigger: CCTGGCGATCGATTCTTGTCATGGCACTGTGGTTGC...AGGAATGAAAAGCAAGGGCCAGGTGGGAGTAGCCCAGCGAAGGCACTTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp CCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGCCTCCTGTTCCTGGCACACGCCTCCTGTTCCTaGCAGCCCAAGTGCCTTCGC +
Preference number: 4 (lower is better)
Translates to: PCVHVFLSQSFPRLLFLAHASCS*QPKCLR
Trigger: GCGAAGGCACTTGGGCTGCCAGGAACAGGAGGCGTG...TGCCAGGAACAGGAGGCGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR GCA 90 bp AGTTTGCCTCTGTTGCCCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGCGGCGCGACCATGCTTaGAAGGATCTGACCGCCGCC +
Preference number: 4 (lower is better)
Translates to: SLPLLPLCSCFPKPEFPTRRDHA*KDLTAA
Trigger: GGCGGCGGTCAGATCCTTGCAAGCATGGTCGCGCCG...CGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGGGCAACAGAGGCAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR GCA 90 bp CAGCCCAAGTGCCTTCGCTGGGCTACTCCCACCTGGCCCTTGCTTTTCATTCCTCTCCAGCTCCTGCTCTaGTTGAATGGGAGAGACAGA +
Preference number: 4 (lower is better)
Translates to: QPKCLRWATPTWPLLFIPLQLLL*LNGRDR
Trigger: TCTGTCTCTCCCATTCAAGCAGAGCAGGAGCTGGAG...AGGAATGAAAAGCAAGGGCCAGGTGGGAGTAGCCCAGCGAAGGCACTTGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR GCA 90 bp CAGCCCAAGTGCCTTCGCTGGGCTACTCCCACCTGGCCCTTGCTTTTCATTCCTCTCCCACCTGGCCCTTaGTTTTCATTCCTTAGGGCA +
Preference number: 4 (lower is better)
Translates to: QPKCLRWATPTWPLLFIPLPPGP*FSFLRA
Trigger: TGCCCTAAGGAATGAAAAGCAAGGGCCAGGTGGGAG...AGGAATGAAAAGCAAGGGCCAGGTGGGAGTAGCCCAGCGAAGGCACTTGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR TCA 90 bp CAGCCCAAGTGCCTTCGCTGGGCTACTCCCACCTGGCCCTTGCTTTTCATTCCTCAGCCATGTGCTAGCTaGAAGCCATTCAATGAGGCT +
Preference number: 4 (lower is better)
Translates to: QPKCLRWATPTWPLLFIPQPCAS*KPFNEA
Trigger: AGCCTCATTGAATGGCTTTCAGCTAGCACATGGCTG...AGGAATGAAAAGCAAGGGCCAGGTGGGAGTAGCCCAGCGAAGGCACTTGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR GCA 90 bp CAGCCCAAGTGCCTTCGCTGGGCTACTCCCACCTGGCCCTTGCTTTTCATTCCTGCGGACAGACTGATATaGCGCAGTGTTAGACAACTC +
Preference number: 4 (lower is better)
Translates to: QPKCLRWATPTWPLLFIPADRLI*RSVRQL
Trigger: GAGTTGTCTAACACTGCGGCATATCAGTCTGTCCGC...AGGAATGAAAAGCAAGGGCCAGGTGGGAGTAGCCCAGCGAAGGCACTTGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR TCA 90 bp CCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGCCTCCTGTTCCTGGCACCGAAGTCTGCTGTTTaGTGCCAACGGATCTGGGGA +
Preference number: 4 (lower is better)
Translates to: PCVHVFLSQSFPRLLFLAPKSAV*CQRIWG
Trigger: TCCCCAGATCCGTTGGCATCAAACAGCAGACTTCGG...TGCCAGGAACAGGAGGCGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR TCA 90 bp CCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGCCTCCTGTTCCTGGCAGCAACCACAGTGCCATaGCAAGAATCGATCGCCAGG +
Preference number: 4 (lower is better)
Translates to: PCVHVFLSQSFPRLLFLAATTVP*QESIAR
Trigger: CCTGGCGATCGATTCTTGTCATGGCACTGTGGTTGC...TGCCAGGAACAGGAGGCGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp TCGAACAACAGTTTGCCTCTGTTGCCCCTGTGTTCATGTTTTCCTAAGCCAGAGCGCTCCGTCTGCCCCTaGGAACCACGGTGGAAGGTT +
Preference number: 4 (lower is better)
Translates to: SNNSLPLLPLCSCFPKPERSVCP*EPRWKV
Trigger: AACCTTCCACCGTGGTTCCCAGGGGCAGACGGAGCG...CTCTGGCTTAGGAAAACATGAACACAGGGGCAACAGAGGCAAACTGTTGTTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR TCA 90 bp CCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGCCTCCTGTTCCTGGCAAGGATGCGGACAGACTaGTATGCCGCAGTGTTAGAC +
Preference number: 4 (lower is better)
Translates to: PCVHVFLSQSFPRLLFLARMRTD*YAAVLD
Trigger: GTCTAACACTGCGGCATATCAGTCTGTCCGCATCCT...TGCCAGGAACAGGAGGCGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR GCA 90 bp TATTCCTGCTGTTTGGAGCTACACCAGAACCCCTTGGAACTCTACAGAGGGGTAGAAGCCCCATATCACTaGCCCAGCAGGCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: YSCCLELHQNPLELYRGVEAPYH*PSRLLL
Trigger: CAGAAGGAGCCTGCTGGGGCAGTGATATGGGGCTTC...TACCCCTCTGTAGAGTTCCAAGGGGTTCTGGTGTAGCTCCAAACAGCAGGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR GCA 90 bp CCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGCCTCCTGTTCCTGGCACTCGAGGGTGGATGCTaGCAAAAGGCGAGTCTCTAT +
Preference number: 4 (lower is better)
Translates to: PCVHVFLSQSFPRLLFLALEGGC*QKASLY
Trigger: ATAGAGACTCGCCTTTTGGCAGCATCCACCCTCGAG...TGCCAGGAACAGGAGGCGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp CAGCCCAAGTGCCTTCGCTGGGCTACTCCCACCTGGCCCTTGCTTTTCATTCCTGAACAGAGTGCTTACTaGGACCAGTTACAGAATCGT +
Preference number: 4 (lower is better)
Translates to: QPKCLRWATPTWPLLFIPEQSAY*DQLQNR
Trigger: ACGATTCTGTAACTGGTCCCAGTAAGCACTCTGTTC...AGGAATGAAAAGCAAGGGCCAGGTGGGAGTAGCCCAGCGAAGGCACTTGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp TATTCCTGCTGTTTGGAGCTACACCAGAACCCCTTGGAACTCTACAGAGGGGTACCCTGGGAACCACGGTaGAAGGTTTCACGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: YSCCLELHQNPLELYRGVPWEPR*KVSRQS
Trigger: AGACTGGCGTGAAACCTTCCACCGTGGTTCCCAGGG...TACCCCTCTGTAGAGTTCCAAGGGGTTCTGGTGTAGCTCCAAACAGCAGGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR CCA 90 bp CCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGCCTCCTGTTCCTGGCAAGGGCACTACTGGGGTaGTATAGGGGACACTGCTTA +
Preference number: 4 (lower is better)
Translates to: PCVHVFLSQSFPRLLFLARALLG*YRGHCL
Trigger: TAAGCAGTGTCCCCTATACCACCCCAGTAGTGCCCT...TGCCAGGAACAGGAGGCGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp AGTTTGCCTCTGTTGCCCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGCTGGCAGGGCACTACTaGGGTGGTATAGGGGACACT +
Preference number: 4 (lower is better)
Translates to: SLPLLPLCSCFPKPEFPTLAGHY*GGIGDT
Trigger: AGTGTCCCCTATACCACCCCAGTAGTGCCCTGCCAG...CGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGGGCAACAGAGGCAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp GAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCAATCCTGCCCAAGTGCCTTCGCTaGGCTACTCCCACCTGGCCC +
Preference number: 4 (lower is better)
Translates to: EHMNTSWPMWPLKSLPILPKCLR*ATPTWP
Trigger: GGGCCAGGTGGGAGTAGCCCAGCGAAGGCACTTGGG...CAGGATTGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
3UTR CAA 72 bp GCCCCCGAATTAGAACAGCCCATGGGGGTATGTGTATaGGGAGTGGAGGAGTGGACGGGTAGATTGACTTTT +
Preference number: 4 (lower is better)
Translates to: APELEQPMGVCV*GVEEWTGRLTF
Trigger: AAAAGTCAATCTACCCGTCCACTCCTCCACTCCCAATACACATACCCCCATGGGCTGTTCTAATTCGGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263593.8
3UTR CAA 72 bp GTTCCTGGAGGTGAAAGGAATCTGGACTTAGAGTTCTaGGCTACCTCTGGCTGCCCCCGAATTAGAACAGCC +
Preference number: 4 (lower is better)
Translates to: VPGGERNLDLEF*ATSGCPRIRTA
Trigger: GGCTGTTCTAATTCGGGGGCAGCCAGAGGTAGCCAAGAACTCTAAGTCCAGATTCCTTTCACCTCCAGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR TCA 90 bp AGTTTGCCTCTGTTGCCCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGTTCATGATGGTTTCCTaGCCTTGGCGCAGGGTCACG +
Preference number: 4 (lower is better)
Translates to: SLPLLPLCSCFPKPEFPTFMMVS*PWRRVT
Trigger: CGTGACCCTGCGCCAAGGTCAGGAAACCATCATGAA...CGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGGGCAACAGAGGCAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR TCA 90 bp CCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGCCTCCTGTTCCTGGCACAGCCATGTGCTAGCTaGAAGCCATTCAATGAGGCT +
Preference number: 4 (lower is better)
Translates to: PCVHVFLSQSFPRLLFLAQPCAS*KPFNEA
Trigger: AGCCTCATTGAATGGCTTTCAGCTAGCACATGGCTG...TGCCAGGAACAGGAGGCGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR TCA 90 bp TATTCCTGCTGTTTGGAGCTACACCAGAACCCCTTGGAACTCTACAGAGGGGTAACGGCCATATCACCCTaGACGCGCCTGATCTCATCT +
Preference number: 4 (lower is better)
Translates to: YSCCLELHQNPLELYRGVTAISP*TRLISS
Trigger: AGATGAGATCAGGCGCGTTCAGGGTGATATGGCCGT...TACCCCTCTGTAGAGTTCCAAGGGGTTCTGGTGTAGCTCCAAACAGCAGGAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR CCA 90 bp TCGAACAACAGTTTGCCTCTGTTGCCCCTGTGTTCATGTTTTCCTAAGCCAGAGGCCAGGGTCAGGGACTaGGTGGAGACGGTGTTCATA +
Preference number: 4 (lower is better)
Translates to: SNNSLPLLPLCSCFPKPEARVRD*VETVFI
Trigger: TATGAACACCGTCTCCACCCAGTCCCTGACCCTGGC...CTCTGGCTTAGGAAAACATGAACACAGGGGCAACAGAGGCAAACTGTTGTTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR TCA 90 bp TATTCCTGCTGTTTGGAGCTACACCAGAACCCCTTGGAACTCTACAGAGGGGTAAGGATGCGGACAGACTaGTATGCCGCAGTGTTAGAC +
Preference number: 4 (lower is better)
Translates to: YSCCLELHQNPLELYRGVRMRTD*YAAVLD
Trigger: GTCTAACACTGCGGCATATCAGTCTGTCCGCATCCT...TACCCCTCTGTAGAGTTCCAAGGGGTTCTGGTGTAGCTCCAAACAGCAGGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR GCA 90 bp TATTCCTGCTGTTTGGAGCTACACCAGAACCCCTTGGAACTCTACAGAGGGGTAGCGAAAACCAATACCTaGACTTCTGTCGGCCCACAG +
Preference number: 4 (lower is better)
Translates to: YSCCLELHQNPLELYRGVAKTNT*TSVGPQ
Trigger: CTGTGGGCCGACAGAAGTGCAGGTATTGGTTTTCGC...TACCCCTCTGTAGAGTTCCAAGGGGTTCTGGTGTAGCTCCAAACAGCAGGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR GCA 90 bp CCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGCCTCCTGTTCCTGGCACCAGCAGGCTCCTTCTaGAGCACCATATCATTATTG +
Preference number: 4 (lower is better)
Translates to: PCVHVFLSQSFPRLLFLAPAGSF*STISLL
Trigger: CAATAATGATATGGTGCTGCAGAAGGAGCCTGCTGG...TGCCAGGAACAGGAGGCGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR GCA 90 bp TATTCCTGCTGTTTGGAGCTACACCAGAACCCCTTGGAACTCTACAGAGGGGTACTCCAGCTCCTGCTCTaGTTGAATGGGAGAGACAGA +
Preference number: 4 (lower is better)
Translates to: YSCCLELHQNPLELYRGVLQLLL*LNGRDR
Trigger: TCTGTCTCTCCCATTCAAGCAGAGCAGGAGCTGGAG...TACCCCTCTGTAGAGTTCCAAGGGGTTCTGGTGTAGCTCCAAACAGCAGGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR GCA 90 bp AGTTTGCCTCTGTTGCCCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGCTCCCACCTGGCCCTTaGTTTTCATTCCTTAGGGCA +
Preference number: 4 (lower is better)
Translates to: SLPLLPLCSCFPKPEFPTLPPGP*FSFLRA
Trigger: TGCCCTAAGGAATGAAAAGCAAGGGCCAGGTGGGAG...CGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGGGCAACAGAGGCAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp GAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCAATCCTGGGGTCACGGTCACTGTaGCTCCAGGTGTACCGAAGC +
Preference number: 4 (lower is better)
Translates to: EHMNTSWPMWPLKSLPILGSRSL*LQVYRS
Trigger: GCTTCGGTACACCTGGAGCCACAGTGACCGTGACCC...CAGGATTGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp AACAGCCATGTGCTAGCTGAAAGCCATTCAATGAGGCTTTCTATTAATTTCCTTGTGTCCCGCCCCAGCTaGAGGCGATCAGCCCGATGG +
Preference number: 4 (lower is better)
Translates to: NSHVLAESHSMRLSINFLVSRPS*RRSARW
Trigger: CCATCGGGCTGATCGCCTCCAGCTGGGGCGGGACAC...AAGGAAATTAATAGAAAGCCTCATTGAATGGCTTTCAGCTAGCACATGGCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp GATTCAGTAACCACCTGTCAGGAATTTTGTAAAGACGTCTACGGCCATATCACCATGACCAGGCTTCAATaGGTGTCCCGCCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: DSVTTCQEFCKDVYGHITMTRLQ*VSRPSW
Trigger: CCAGCTGGGGCGGGACACCCATTGAAGCCTGGTCAT...GGTGATATGGCCGTAGACGTCTTTACAAAATTCCTGACAGGTGGTTACTGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp TATTCCTGCTGTTTGGAGCTACACCAGAACCCCTTGGAACTCTACAGAGGGGTAATTCACAAGGCCACGTaGTCCAAGCATAGCGGAGAG +
Preference number: 4 (lower is better)
Translates to: YSCCLELHQNPLELYRGVIHKAT*SKHSGE
Trigger: CTCTCCGCTATGCTTGGACCACGTGGCCTTGTGAAT...TACCCCTCTGTAGAGTTCCAAGGGGTTCTGGTGTAGCTCCAAACAGCAGGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR CCA 90 bp CAGCCCAAGTGCCTTCGCTGGGCTACTCCCACCTGGCCCTTGCTTTTCATTCCTTATATGCTTGTCATGTaGCTTTACTTTCAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: QPKCLRWATPTWPLLFIPYMLVM*LYFQPH
Trigger: GTGAGGCTGAAAGTAAAGCCACATGACAAGCATATA...AGGAATGAAAAGCAAGGGCCAGGTGGGAGTAGCCCAGCGAAGGCACTTGGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp TATTCCTGCTGTTTGGAGCTACACCAGAACCCCTTGGAACTCTACAGAGGGGTAAGAAACTTGAAAAGCTaGGCACGGTGGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: YSCCLELHQNPLELYRGVRNLKS*ARWLTP
Trigger: AGGCGTGAGCCACCGTGCCCAGCTTTTCAAGTTTCT...TACCCCTCTGTAGAGTTCCAAGGGGTTCTGGTGTAGCTCCAAACAGCAGGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR TCA 90 bp TATTCCTGCTGTTTGGAGCTACACCAGAACCCCTTGGAACTCTACAGAGGGGTATTGAGCAGCCCCTTGTaGGCCAAGAGTTCTATCTTC +
Preference number: 4 (lower is better)
Translates to: YSCCLELHQNPLELYRGVLSSPL*AKSSIF
Trigger: GAAGATAGAACTCTTGGCTCACAAGGGGCTGCTCAA...TACCCCTCTGTAGAGTTCCAAGGGGTTCTGGTGTAGCTCCAAACAGCAGGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR TCA 90 bp CAGCCCAAGTGCCTTCGCTGGGCTACTCCCACCTGGCCCTTGCTTTTCATTCCTCTAAATGCTAAAATCTaGAGGACCCATCCTTATATC +
Preference number: 4 (lower is better)
Translates to: QPKCLRWATPTWPLLFIPLNAKI*RTHPYI
Trigger: GATATAAGGATGGGTCCTTCAGATTTTAGCATTTAG...AGGAATGAAAAGCAAGGGCCAGGTGGGAGTAGCCCAGCGAAGGCACTTGGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR GCA 90 bp TACAGACCCTTAGACCAACTAGGGAACAAAAAGCAAGCATTTCAAGTTACCTATGCCCCGGCGCGACCATaGTTGCAAGGATCTGACCGC +
Preference number: 4 (lower is better)
Translates to: YRPLDQLGNKKQAFQVTYAPARP*LQGSDR
Trigger: GCGGTCAGATCCTTGCAAGCATGGTCGCGCCGGGGC...ATAGGTAACTTGAAATGCTTGCTTTTTGTTCCCTAGTTGGTCTAAGGGTCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR GCA 90 bp AGTTTGCCTCTGTTGCCCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGGCGGACAGACTGATATaGCGCAGTGTTAGACAACTC +
Preference number: 4 (lower is better)
Translates to: SLPLLPLCSCFPKPEFPTADRLI*RSVRQL
Trigger: GAGTTGTCTAACACTGCGGCATATCAGTCTGTCCGC...CGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGGGCAACAGAGGCAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp CAGCCCAAGTGCCTTCGCTGGGCTACTCCCACCTGGCCCTTGCTTTTCATTCCTAAATCTGAAGATAACTaGACAAGTCCAAATGGGAAG +
Preference number: 4 (lower is better)
Translates to: QPKCLRWATPTWPLLFIPKSEDN*TSPNGK
Trigger: CTTCCCATTTGGACTTGTCCAGTTATCTTCAGATTT...AGGAATGAAAAGCAAGGGCCAGGTGGGAGTAGCCCAGCGAAGGCACTTGGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp TACAGACCCTTAGACCAACTAGGGAACAAAAAGCAAGCATTTCAAGTTACCTATCCCAAGTGCCTTCGCTaGGCTACTCCCACCTGGCCC +
Preference number: 4 (lower is better)
Translates to: YRPLDQLGNKKQAFQVTYPKCLR*ATPTWP
Trigger: GGGCCAGGTGGGAGTAGCCCAGCGAAGGCACTTGGG...ATAGGTAACTTGAAATGCTTGCTTTTTGTTCCCTAGTTGGTCTAAGGGTCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR GCA 90 bp CCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGCCTCCTGTTCCTGGCATGTAACACAGTCATCTaGATGTTACTCTGCCCACTA +
Preference number: 4 (lower is better)
Translates to: PCVHVFLSQSFPRLLFLACNTVI*MLLCPL
Trigger: TAGTGGGCAGAGTAACATGCAGATGACTGTGTTACA...TGCCAGGAACAGGAGGCGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR GCA 90 bp TACAGACCCTTAGACCAACTAGGGAACAAAAAGCAAGCATTTCAAGTTACCTATTCCTGGCAGCCCAAGTaGCTTCGCTGGGCTACTCCC +
Preference number: 4 (lower is better)
Translates to: YRPLDQLGNKKQAFQVTYSWQPK*LRWATP
Trigger: GGGAGTAGCCCAGCGAAGGCACTTGGGCTGCCAGGA...ATAGGTAACTTGAAATGCTTGCTTTTTGTTCCCTAGTTGGTCTAAGGGTCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR GCA 90 bp AGTTTGCCTCTGTTGCCCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGACTCGAACAACAGTTTaGCTCTGTTGCCCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: SLPLLPLCSCFPKPEFPTTRTTV*LCCPCV
Trigger: AACACAGGGGCAACAGAGGCAAACTGTTGTTCGAGT...CGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGGGCAACAGAGGCAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR GCA 90 bp GAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCAATCCTGTTGGCTACCTCTGGCTaGCCCCGAATTAGAACAGCC +
Preference number: 4 (lower is better)
Translates to: EHMNTSWPMWPLKSLPILLATSG*PRIRTA
Trigger: GGCTGTTCTAATTCGGGGGCAGCCAGAGGTAGCCAA...CAGGATTGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR CCA 90 bp TATTCCTGCTGTTTGGAGCTACACCAGAACCCCTTGGAACTCTACAGAGGGGTAATATTGGACTCCCCCTaGTACCATACTACCCCTTTC +
Preference number: 4 (lower is better)
Translates to: YSCCLELHQNPLELYRGVILDSP*YHTTPF
Trigger: GAAAGGGGTAGTATGGTACCAGGGGGAGTCCAATAT...TACCCCTCTGTAGAGTTCCAAGGGGTTCTGGTGTAGCTCCAAACAGCAGGAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR CCA 90 bp CTAAATAAAATCTTGGCACTGACAAAGTTATTCCTGCTGTTTGGAGCTACACCACGCTCCGTCTGCCCCTaGGAACCACGGTGGAAGGTT +
Preference number: 4 (lower is better)
Translates to: LNKILALTKLFLLFGATPRSVCP*EPRWKV
Trigger: AACCTTCCACCGTGGTTCCCAGGGGCAGACGGAGCG...TGGTGTAGCTCCAAACAGCAGGAATAACTTTGTCAGTGCCAAGATTTTATTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR CCA 90 bp GAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCAATCCTGAAGCAGGGTCGGGCCTaGTTAGTACTTGGATGGGAG +
Preference number: 4 (lower is better)
Translates to: EHMNTSWPMWPLKSLPILKQGRA*LVLGWE
Trigger: CTCCCATCCAAGTACTAACCAGGCCCGACCCTGCTT...CAGGATTGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp CTAAATAAAATCTTGGCACTGACAAAGTTATTCCTGCTGTTTGGAGCTACACCACACGCCTCCTGTTCCTaGCAGCCCAAGTGCCTTCGC +
Preference number: 4 (lower is better)
Translates to: LNKILALTKLFLLFGATPHASCS*QPKCLR
Trigger: GCGAAGGCACTTGGGCTGCCAGGAACAGGAGGCGTG...TGGTGTAGCTCCAAACAGCAGGAATAACTTTGTCAGTGCCAAGATTTTATTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR CCA 90 bp AGTTTGCCTCTGTTGCCCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGTTGGGAGTGGAGGAGTaGACGGGTAGATTGACTTTT +
Preference number: 4 (lower is better)
Translates to: SLPLLPLCSCFPKPEFPTLGVEE*TGRLTF
Trigger: AAAAGTCAATCTACCCGTCCACTCCTCCACTCCCAA...CGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGGGCAACAGAGGCAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR CCA 90 bp CAGCCCAAGTGCCTTCGCTGGGCTACTCCCACCTGGCCCTTGCTTTTCATTCCTAAATTCACATATAATTaGGGGTTAGTCCCATACTCT +
Preference number: 4 (lower is better)
Translates to: QPKCLRWATPTWPLLFIPKFTYN*GLVPYS
Trigger: AGAGTATGGGACTAACCCCCAATTATATGTGAATTT...AGGAATGAAAAGCAAGGGCCAGGTGGGAGTAGCCCAGCGAAGGCACTTGGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR TCA 90 bp CCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGCCTCCTGTTCCTGGCACATGAACTCTCAGGGTaGAGTTTATTTTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: PCVHVFLSQSFPRLLFLAHELSG*SLFSPK
Trigger: CTTTGGAGAAAATAAACTTCACCCTGAGAGTTCATG...TGCCAGGAACAGGAGGCGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR TCA 90 bp GATTCAGTAACCACCTGTCAGGAATTTTGTAAAGACGTCTACGGCCATATCACCCACGCCAGTCTTCGATaGGTGCAGGGAATGTGCAAT +
Preference number: 4 (lower is better)
Translates to: DSVTTCQEFCKDVYGHITHASLR*VQGMCN
Trigger: ATTGCACATTCCCTGCACTCATCGAAGACTGGCGTG...GGTGATATGGCCGTAGACGTCTTTACAAAATTCCTGACAGGTGGTTACTGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR TCA 90 bp GAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCAATCCTGCACGCCAGTCTTCGATaGGTGCAGGGAATGTGCAAT +
Preference number: 4 (lower is better)
Translates to: EHMNTSWPMWPLKSLPILHASLR*VQGMCN
Trigger: ATTGCACATTCCCTGCACTCATCGAAGACTGGCGTG...CAGGATTGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR TCA 90 bp AGTTTGCCTCTGTTGCCCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGGGGAAATCCATCGTCTaGGCTCTTCTTAGACAAATC +
Preference number: 4 (lower is better)
Translates to: SLPLLPLCSCFPKPEFPTGKSIV*ALLRQI
Trigger: GATTTGTCTAAGAAGAGCTCAGACGATGGATTTCCC...CGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGGGCAACAGAGGCAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR TCA 90 bp CCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGCCTCCTGTTCCTGGCAGAATTGGTTTGGGCTTaGAGAGAATACAAAGAGATC +
Preference number: 4 (lower is better)
Translates to: PCVHVFLSQSFPRLLFLAELVWA*REYKEI
Trigger: GATCTCTTTGTATTCTCTTCAAGCCCAAACCAATTC...TGCCAGGAACAGGAGGCGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR GCA 90 bp TATTCCTGCTGTTTGGAGCTACACCAGAACCCCTTGGAACTCTACAGAGGGGTACCAGTCTTCGATGAGTaGAGGGAATGTGCAATTGTA +
Preference number: 4 (lower is better)
Translates to: YSCCLELHQNPLELYRGVPVFDE*RECAIV
Trigger: TACAATTGCACATTCCCTGCACTCATCGAAGACTGG...TACCCCTCTGTAGAGTTCCAAGGGGTTCTGGTGTAGCTCCAAACAGCAGGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR GCA 90 bp AGTTTGCCTCTGTTGCCCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGTGGTATAGGGGACACTaGTTATATTCACAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: SLPLLPLCSCFPKPEFPTWYRGH*LYSQGH
Trigger: GTGGCCTTGTGAATATAAGCAGTGTCCCCTATACCA...CGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGGGCAACAGAGGCAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp ATTGAGGTCCAATTTGTCTGTAGTTCAGAATTAGTCCAATACAGACCCTTAGACGGGTCACGGTCACTGTaGCTCCAGGTGTACCGAAGC +
Preference number: 4 (lower is better)
Translates to: IEVQFVCSSELVQYRPLDGSRSL*LQVYRS
Trigger: GCTTCGGTACACCTGGAGCCACAGTGACCGTGACCC...GTCTAAGGGTCTGTATTGGACTAATTCTGAACTACAGACAAATTGGACCTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp GAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCAATCCTGAGGCGATCAGCCCGATaGGATACTGCAGAGTGTCAT +
Preference number: 4 (lower is better)
Translates to: EHMNTSWPMWPLKSLPILRRSAR*DTAECH
Trigger: ATGACACTCTGCAGTATCCCATCGGGCTGATCGCCT...CAGGATTGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp AACAGCCATGTGCTAGCTGAAAGCCATTCAATGAGGCTTTCTATTAATTTCCTTATGACCAGGCTTCAATaGGTGTCCCGCCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: NSHVLAESHSMRLSINFLMTRLQ*VSRPSW
Trigger: CCAGCTGGGGCGGGACACCCATTGAAGCCTGGTCAT...AAGGAAATTAATAGAAAGCCTCATTGAATGGCTTTCAGCTAGCACATGGCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp TATTCCTGCTGTTTGGAGCTACACCAGAACCCCTTGGAACTCTACAGAGGGGTAACAGTGGATGGATCATaGCATTCCAGAGAACAGAGT +
Preference number: 4 (lower is better)
Translates to: YSCCLELHQNPLELYRGVTVDGS*HSREQS
Trigger: ACTCTGTTCTCTGGAATGCCATGATCCATCCACTGT...TACCCCTCTGTAGAGTTCCAAGGGGTTCTGGTGTAGCTCCAAACAGCAGGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR CCA 90 bp GAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCAATCCTGTGGGCATCTTTGGGTTaGGGACATAGCCGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: EHMNTSWPMWPLKSLPILWASLG*GHSRSL
Trigger: CAGACTTCGGCTATGTCCCCAACCCAAAGATGCCCA...CAGGATTGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR TCA 90 bp GATTCAGTAACCACCTGTCAGGAATTTTGTAAAGACGTCTACGGCCATATCACCTTGAGCAGCCCCTTGTaGGCCAAGAGTTCTATCTTC +
Preference number: 4 (lower is better)
Translates to: DSVTTCQEFCKDVYGHITLSSPL*AKSSIF
Trigger: GAAGATAGAACTCTTGGCTCACAAGGGGCTGCTCAA...GGTGATATGGCCGTAGACGTCTTTACAAAATTCCTGACAGGTGGTTACTGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR TCA 90 bp TATAAAGAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCAAGCTACTCGGGAGGCTaGGGCAGGAAGAATCGCTTG +
Preference number: 4 (lower is better)
Translates to: YKEHMNTSWPMWPLKSLPSYSGG*GRKNRL
Trigger: CAAGCGATTCTTCCTGCCTCAGCCTCCCGAGTAGCT...TGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTCTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR GCA 90 bp GAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCAATCCTGAAGCTGGAAGCCACTTaGATCGATGGTCACTGCAAC +
Preference number: 4 (lower is better)
Translates to: EHMNTSWPMWPLKSLPILKLEAT*IDGHCN
Trigger: GTTGCAGTGACCATCGATGCAAGTGGCTTCCAGCTT...CAGGATTGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp TCGAACAACAGTTTGCCTCTGTTGCCCCTGTGTTCATGTTTTCCTAAGCCAGAGGAACAGAGTGCTTACTaGGACCAGTTACAGAATCGT +
Preference number: 4 (lower is better)
Translates to: SNNSLPLLPLCSCFPKPEEQSAY*DQLQNR
Trigger: ACGATTCTGTAACTGGTCCCAGTAAGCACTCTGTTC...CTCTGGCTTAGGAAAACATGAACACAGGGGCAACAGAGGCAAACTGTTGTTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp TACAGACCCTTAGACCAACTAGGGAACAAAAAGCAAGCATTTCAAGTTACCTATCCCTGGGAACCACGGTaGAAGGTTTCACGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: YRPLDQLGNKKQAFQVTYPWEPR*KVSRQS
Trigger: AGACTGGCGTGAAACCTTCCACCGTGGTTCCCAGGG...ATAGGTAACTTGAAATGCTTGCTTTTTGTTCCCTAGTTGGTCTAAGGGTCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp GAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCAATCCTGCTGGACAAGTCCAAATaGGAAGAAACGCTCCGTCTG +
Preference number: 4 (lower is better)
Translates to: EHMNTSWPMWPLKSLPILLDKSK*EETLRL
Trigger: CAGACGGAGCGTTTCTTCCCATTTGGACTTGTCCAG...CAGGATTGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp GAAGCTAAGCAGGGTCGGGCCTGGTTAGTACTTGGATGGGAGAAATTTTATAAATGTTTATCTCGAGGGTaGATGCTGCCAAAAGGCGAG +
Preference number: 4 (lower is better)
Translates to: EAKQGRAWLVLGWEKFYKCLSRG*MLPKGE
Trigger: CTCGCCTTTTGGCAGCATCCACCCTCGAGATAAACA...TTTATAAAATTTCTCCCATCCAAGTACTAACCAGGCCCGACCCTGCTTAGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp TGTAGTTCAGAATTAGTCCAATACAGACCCTTAGACCAACTAGGGAACAAAAAGGCCAGGGTCAGGGACTaGGTGGAGACGGTGTTCATA +
Preference number: 4 (lower is better)
Translates to: CSSELVQYRPLDQLGNKKARVRD*VETVFI
Trigger: TATGAACACCGTCTCCACCCAGTCCCTGACCCTGGC...CTTTTTGTTCCCTAGTTGGTCTAAGGGTCTGTATTGGACTAATTCTGAACTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp AACAGCCATGTGCTAGCTGAAAGCCATTCAATGAGGCTTTCTATTAATTTCCTTCTGGCAGGGCACTACTaGGGTGGTATAGGGGACACT +
Preference number: 4 (lower is better)
Translates to: NSHVLAESHSMRLSINFLLAGHY*GGIGDT
Trigger: AGTGTCCCCTATACCACCCCAGTAGTGCCCTGCCAG...AAGGAAATTAATAGAAAGCCTCATTGAATGGCTTTCAGCTAGCACATGGCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR TCA 90 bp CTAAATAAAATCTTGGCACTGACAAAGTTATTCCTGCTGTTTGGAGCTACACCACCGAAGTCTGCTGTTTaGTGCCAACGGATCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LNKILALTKLFLLFGATPPKSAV*CQRIWG
Trigger: TCCCCAGATCCGTTGGCATCAAACAGCAGACTTCGG...TGGTGTAGCTCCAAACAGCAGGAATAACTTTGTCAGTGCCAAGATTTTATTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR TCA 90 bp ATTGAGGTCCAATTTGTCTGTAGTTCAGAATTAGTCCAATACAGACCCTTAGACCACCCTGAACGCGCCTaGTCTCATCTGATCTCGGAA +
Preference number: 4 (lower is better)
Translates to: IEVQFVCSSELVQYRPLDHPERA*SHLISE
Trigger: TTCCGAGATCAGATGAGATCAGGCGCGTTCAGGGTG...GTCTAAGGGTCTGTATTGGACTAATTCTGAACTACAGACAAATTGGACCTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR TCA 90 bp TGTAGTTCAGAATTAGTCCAATACAGACCCTTAGACCAACTAGGGAACAAAAAGACGGCCATATCACCCTaGACGCGCCTGATCTCATCT +
Preference number: 4 (lower is better)
Translates to: CSSELVQYRPLDQLGNKKTAISP*TRLISS
Trigger: AGATGAGATCAGGCGCGTTCAGGGTGATATGGCCGT...CTTTTTGTTCCCTAGTTGGTCTAAGGGTCTGTATTGGACTAATTCTGAACTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR TCA 90 bp AGTTTGCCTCTGTTGCCCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGGAATTGGTTTGGGCTTaGAGAGAATACAAAGAGATC +
Preference number: 4 (lower is better)
Translates to: SLPLLPLCSCFPKPEFPTELVWA*REYKEI
Trigger: GATCTCTTTGTATTCTCTTCAAGCCCAAACCAATTC...CGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGGGCAACAGAGGCAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR GCA 90 bp GATTCAGTAACCACCTGTCAGGAATTTTGTAAAGACGTCTACGGCCATATCACCCTCCAAAGTCTGTTGTaGCATCACTTCGAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: DSVTTCQEFCKDVYGHITLQSLL*HHFERS
Trigger: GGACCTTTCGAAGTGATGGCACAACAGACTTTGGAG...GGTGATATGGCCGTAGACGTCTTTACAAAATTCCTGACAGGTGGTTACTGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR GCA 90 bp GAAGCTAAGCAGGGTCGGGCCTGGTTAGTACTTGGATGGGAGAAATTTTATAAAATCTGCATGTTACTCTaGCCACTACAGAGCCAGACA +
Preference number: 4 (lower is better)
Translates to: EAKQGRAWLVLGWEKFYKICMLL*PLQSQT
Trigger: TGTCTGGCTCTGTAGTGGGCAGAGTAACATGCAGAT...TTTATAAAATTTCTCCCATCCAAGTACTAACCAGGCCCGACCCTGCTTAGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp TATTCCTGCTGTTTGGAGCTACACCAGAACCCCTTGGAACTCTACAGAGGGGTAAGTTACAGAATCGTATaGAATGGACCCTTGTTTAGG +
Preference number: 4 (lower is better)
Translates to: YSCCLELHQNPLELYRGVSYRIV*NGPLFR
Trigger: CCTAAACAAGGGTCCATTCCATACGATTCTGTAACT...TACCCCTCTGTAGAGTTCCAAGGGGTTCTGGTGTAGCTCCAAACAGCAGGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR CCA 90 bp ATTGAGGTCCAATTTGTCTGTAGTTCAGAATTAGTCCAATACAGACCCTTAGACAAGCAGGGTCGGGCCTaGTTAGTACTTGGATGGGAG +
Preference number: 4 (lower is better)
Translates to: IEVQFVCSSELVQYRPLDKQGRA*LVLGWE
Trigger: CTCCCATCCAAGTACTAACCAGGCCCGACCCTGCTT...GTCTAAGGGTCTGTATTGGACTAATTCTGAACTACAGACAAATTGGACCTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR TCA 90 bp TATTCCTGCTGTTTGGAGCTACACCAGAACCCCTTGGAACTCTACAGAGGGGTAGCACCATATCATTATTaGTGTATGAAGCAAAGCGAA +
Preference number: 4 (lower is better)
Translates to: YSCCLELHQNPLELYRGVAPYHY*CMKQSE
Trigger: TTCGCTTTGCTTCATACATCAATAATGATATGGTGC...TACCCCTCTGTAGAGTTCCAAGGGGTTCTGGTGTAGCTCCAAACAGCAGGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR TCA 90 bp TATTCCTGCTGTTTGGAGCTACACCAGAACCCCTTGGAACTCTACAGAGGGGTAATAAAATCTTGGCACTaGCAAAGTTATTCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: YSCCLELHQNPLELYRGVIKSWH*QSYSCC
Trigger: ACAGCAGGAATAACTTTGTCAGTGCCAAGATTTTAT...TACCCCTCTGTAGAGTTCCAAGGGGTTCTGGTGTAGCTCCAAACAGCAGGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR TCA 90 bp GATTCAGTAACCACCTGTCAGGAATTTTGTAAAGACGTCTACGGCCATATCACCCTGGCCACTGTAAACTaGGAAGCTAAGTTAACTGGT +
Preference number: 4 (lower is better)
Translates to: DSVTTCQEFCKDVYGHITLATVN*EAKLTG
Trigger: ACCAGTTAACTTAGCTTCTCAGTTTACAGTGGCCAG...GGTGATATGGCCGTAGACGTCTTTACAAAATTCCTGACAGGTGGTTACTGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR GCA 90 bp AACAGCCATGTGCTAGCTGAAAGCCATTCAATGAGGCTTTCTATTAATTTCCTTGTGGGCTTAGACCACTaGAAGTCAACCGCAACAAGG +
Preference number: 4 (lower is better)
Translates to: NSHVLAESHSMRLSINFLVGLDH*KSTATR
Trigger: CCTTGTTGCGGTTGACTTGCAGTGGTCTAAGCCCAC...AAGGAAATTAATAGAAAGCCTCATTGAATGGCTTTCAGCTAGCACATGGCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR GCA 90 bp TACAGACCCTTAGACCAACTAGGGAACAAAAAGCAAGCATTTCAAGTTACCTATGTGGGCTTAGACCACTaGAAGTCAACCGCAACAAGG +
Preference number: 4 (lower is better)
Translates to: YRPLDQLGNKKQAFQVTYVGLDH*KSTATR
Trigger: CCTTGTTGCGGTTGACTTGCAGTGGTCTAAGCCCAC...ATAGGTAACTTGAAATGCTTGCTTTTTGTTCCCTAGTTGGTCTAAGGGTCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR GCA 90 bp TATAAAGAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCACTCGAGGGTGGATGCTaGCAAAAGGCGAGTCTCTAT +
Preference number: 4 (lower is better)
Translates to: YKEHMNTSWPMWPLKSLPLEGGC*QKASLY
Trigger: ATAGAGACTCGCCTTTTGGCAGCATCCACCCTCGAG...TGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTCTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp AACAGCCATGTGCTAGCTGAAAGCCATTCAATGAGGCTTTCTATTAATTTCCTTTGGGCATCTTTGGGTTaGGGACATAGCCGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: NSHVLAESHSMRLSINFLWASLG*GHSRSL
Trigger: CAGACTTCGGCTATGTCCCCAACCCAAAGATGCCCA...AAGGAAATTAATAGAAAGCCTCATTGAATGGCTTTCAGCTAGCACATGGCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp AACAGCCATGTGCTAGCTGAAAGCCATTCAATGAGGCTTTCTATTAATTTCCTTATTCACAAGGCCACGTaGTCCAAGCATAGCGGAGAG +
Preference number: 4 (lower is better)
Translates to: NSHVLAESHSMRLSINFLIHKAT*SKHSGE
Trigger: CTCTCCGCTATGCTTGGACCACGTGGCCTTGTGAAT...AAGGAAATTAATAGAAAGCCTCATTGAATGGCTTTCAGCTAGCACATGGCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp TGTAGTTCAGAATTAGTCCAATACAGACCCTTAGACCAACTAGGGAACAAAAAGAGGGCACTACTGGGGTaGTATAGGGGACACTGCTTA +
Preference number: 4 (lower is better)
Translates to: CSSELVQYRPLDQLGNKKRALLG*YRGHCL
Trigger: TAAGCAGTGTCCCCTATACCACCCCAGTAGTGCCCT...CTTTTTGTTCCCTAGTTGGTCTAAGGGTCTGTATTGGACTAATTCTGAACTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR TCA 90 bp TATAAAGAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCATTAGCAACATTGCTCTaGTGTCCAGGACCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: YKEHMNTSWPMWPLKSLPLATLL*CPGPWS
Trigger: AGACCAGGGTCCTGGACATCAGAGCAATGTTGCTAA...TGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTCTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR TCA 90 bp TGTAGTTCAGAATTAGTCCAATACAGACCCTTAGACCAACTAGGGAACAAAAAGTTAGCAACATTGCTCTaGTGTCCAGGACCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: CSSELVQYRPLDQLGNKKLATLL*CPGPWS
Trigger: AGACCAGGGTCCTGGACATCAGAGCAATGTTGCTAA...CTTTTTGTTCCCTAGTTGGTCTAAGGGTCTGTATTGGACTAATTCTGAACTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR GCA 90 bp GAAGCTAAGCAGGGTCGGGCCTGGTTAGTACTTGGATGGGAGAAATTTTATAAACTTTCAGAGTCATATTaGACAGTGGATGGATCATGG +
Preference number: 4 (lower is better)
Translates to: EAKQGRAWLVLGWEKFYKLSESY*TVDGSW
Trigger: CCATGATCCATCCACTGTGCAATATGACTCTGAAAG...TTTATAAAATTTCTCCCATCCAAGTACTAACCAGGCCCGACCCTGCTTAGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR GCA 90 bp TGTAGTTCAGAATTAGTCCAATACAGACCCTTAGACCAACTAGGGAACAAAAAGAAGCTGGAAGCCACTTaGATCGATGGTCACTGCAAC +
Preference number: 4 (lower is better)
Translates to: CSSELVQYRPLDQLGNKKKLEAT*IDGHCN
Trigger: GTTGCAGTGACCATCGATGCAAGTGGCTTCCAGCTT...CTTTTTGTTCCCTAGTTGGTCTAAGGGTCTGTATTGGACTAATTCTGAACTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR GCA 90 bp TCGAACAACAGTTTGCCTCTGTTGCCCCTGTGTTCATGTTTTCCTAAGCCAGAGTTACATTTGGGGAAATaGAGTGAATTCCCACATCAT +
Preference number: 4 (lower is better)
Translates to: SNNSLPLLPLCSCFPKPELHLGK*SEFPHH
Trigger: ATGATGTGGGAATTCACTGCATTTCCCCAAATGTAA...CTCTGGCTTAGGAAAACATGAACACAGGGGCAACAGAGGCAAACTGTTGTTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR GCA 90 bp ATTGAGGTCCAATTTGTCTGTAGTTCAGAATTAGTCCAATACAGACCCTTAGACACACTACCTGTGGGATaGCTTAGTTACCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: IEVQFVCSSELVQYRPLDTLPVG*LSYPAA
Trigger: TGCTGCTGGGTAACTAAGGCATCCCACAGGTAGTGT...GTCTAAGGGTCTGTATTGGACTAATTCTGAACTACAGACAAATTGGACCTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR CCA 90 bp TATAAAGAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCACTGGACAAGTCCAAATaGGAAGAAACGCTCCGTCTG +
Preference number: 4 (lower is better)
Translates to: YKEHMNTSWPMWPLKSLPLDKSK*EETLRL
Trigger: CAGACGGAGCGTTTCTTCCCATTTGGACTTGTCCAG...TGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTCTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp AACAGCCATGTGCTAGCTGAAAGCCATTCAATGAGGCTTTCTATTAATTTCCTTTGTTTATCTCGAGGGTaGATGCTGCCAAAAGGCGAG +
Preference number: 4 (lower is better)
Translates to: NSHVLAESHSMRLSINFLCLSRG*MLPKGE
Trigger: CTCGCCTTTTGGCAGCATCCACCCTCGAGATAAACA...AAGGAAATTAATAGAAAGCCTCATTGAATGGCTTTCAGCTAGCACATGGCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp AACAGCCATGTGCTAGCTGAAAGCCATTCAATGAGGCTTTCTATTAATTTCCTTAGCCACTTGCATCGATaGTCACTGCAACAGGAGATC +
Preference number: 4 (lower is better)
Translates to: NSHVLAESHSMRLSINFLSHLHR*SLQQEI
Trigger: GATCTCCTGTTGCAGTGACCATCGATGCAAGTGGCT...AAGGAAATTAATAGAAAGCCTCATTGAATGGCTTTCAGCTAGCACATGGCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp TGTAGTTCAGAATTAGTCCAATACAGACCCTTAGACCAACTAGGGAACAAAAAGGGTTCATGGTTTCTATaGGGCCAGATGCATGAGAGG +
Preference number: 4 (lower is better)
Translates to: CSSELVQYRPLDQLGNKKGSWFL*GQMHER
Trigger: CCTCTCATGCATCTGGCCCCATAGAAACCATGAACC...CTTTTTGTTCCCTAGTTGGTCTAAGGGTCTGTATTGGACTAATTCTGAACTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR CCA 90 bp AGTTTGCCTCTGTTGCCCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGCTCAAGTCAAGTGAATaGTTCAGCAAAATAGTGTTT +
Preference number: 4 (lower is better)
Translates to: SLPLLPLCSCFPKPEFPTLKSSE*FSKIVF
Trigger: AAACACTATTTTGCTGAACCATTCACTTGACTTGAG...CGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGGGCAACAGAGGCAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR CCA 90 bp TCGAACAACAGTTTGCCTCTGTTGCCCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTTCTCTGCATAAATaGCTTGAGCATACTGGCATT +
Preference number: 4 (lower is better)
Translates to: SNNSLPLLPLCSCFPKPEFSLHK*LEHTGI
Trigger: AATGCCAGTATGCTCAAGCCATTTATGCAGAGAAAA...CTCTGGCTTAGGAAAACATGAACACAGGGGCAACAGAGGCAAACTGTTGTTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR CCA 90 bp AACAGCCATGTGCTAGCTGAAAGCCATTCAATGAGGCTTTCTATTAATTTCCTTTTACCAAGGGCTGTCTaGAAAGGGAGGGACAAAAGG +
Preference number: 4 (lower is better)
Translates to: NSHVLAESHSMRLSINFLLPRAV*KGRDKR
Trigger: CCTTTTGTCCCTCCCTTTCCAGACAGCCCTTGGTAA...AAGGAAATTAATAGAAAGCCTCATTGAATGGCTTTCAGCTAGCACATGGCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR CCA 90 bp ATTGAGGTCCAATTTGTCTGTAGTTCAGAATTAGTCCAATACAGACCCTTAGACCCTCAACACTACCTGTaGGATGCCTTAGTTACCCAG +
Preference number: 4 (lower is better)
Translates to: IEVQFVCSSELVQYRPLDPQHYL*DALVTQ
Trigger: CTGGGTAACTAAGGCATCCCACAGGTAGTGTTGAGG...GTCTAAGGGTCTGTATTGGACTAATTCTGAACTACAGACAAATTGGACCTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR TCA 90 bp TATAAAGAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCAGAGCCAGCACACTGCTaGCATGTACTTGAAATATCC +
Preference number: 4 (lower is better)
Translates to: YKEHMNTSWPMWPLKSLPEPAHC*HVLEIS
Trigger: GGATATTTCAAGTACATGTCAGCAGTGTGCTGGCTC...TGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTCTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR TCA 90 bp TACAGACCCTTAGACCAACTAGGGAACAAAAAGCAAGCATTTCAAGTTACCTATGAGCCAGCACACTGCTaGCATGTACTTGAAATATCC +
Preference number: 4 (lower is better)
Translates to: YRPLDQLGNKKQAFQVTYEPAHC*HVLEIS
Trigger: GGATATTTCAAGTACATGTCAGCAGTGTGCTGGCTC...ATAGGTAACTTGAAATGCTTGCTTTTTGTTCCCTAGTTGGTCTAAGGGTCTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR TCA 90 bp TGTAGTTCAGAATTAGTCCAATACAGACCCTTAGACCAACTAGGGAACAAAAAGCTAGGTTCCTGGAGGTaGAAGGAATCTGGACTTAGA +
Preference number: 4 (lower is better)
Translates to: CSSELVQYRPLDQLGNKKLGSWR*KESGLR
Trigger: TCTAAGTCCAGATTCCTTTCACCTCCAGGAACCTAG...CTTTTTGTTCCCTAGTTGGTCTAAGGGTCTGTATTGGACTAATTCTGAACTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR TCA 90 bp GATTCAGTAACCACCTGTCAGGAATTTTGTAAAGACGTCTACGGCCATATCACCTTTGGGGAAATGCAGTaGATTCCCACATCATGTTTT +
Preference number: 4 (lower is better)
Translates to: DSVTTCQEFCKDVYGHITFGEMQ*IPTSCF
Trigger: AAAACATGATGTGGGAATTCACTGCATTTCCCCAAA...GGTGATATGGCCGTAGACGTCTTTACAAAATTCCTGACAGGTGGTTACTGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR GCA 90 bp ATTGAGGTCCAATTTGTCTGTAGTTCAGAATTAGTCCAATACAGACCCTTAGACCTCCAAAGTCTGTTGTaGCATCACTTCGAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: IEVQFVCSSELVQYRPLDLQSLL*HHFERS
Trigger: GGACCTTTCGAAGTGATGGCACAACAGACTTTGGAG...GTCTAAGGGTCTGTATTGGACTAATTCTGAACTACAGACAAATTGGACCTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR GCA 90 bp TATAAAGAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCAATCTGCATGTTACTCTaGCCACTACAGAGCCAGACA +
Preference number: 4 (lower is better)
Translates to: YKEHMNTSWPMWPLKSLPICMLL*PLQSQT
Trigger: TGTCTGGCTCTGTAGTGGGCAGAGTAACATGCAGAT...TGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTCTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR GCA 90 bp AACAGCCATGTGCTAGCTGAAAGCCATTCAATGAGGCTTTCTATTAATTTCCTTGACATAGCCGAAGTCTaGTGTTTGATGCCAACGGAT +
Preference number: 4 (lower is better)
Translates to: NSHVLAESHSMRLSINFLDIAEV*CLMPTD
Trigger: ATCCGTTGGCATCAAACAGCAGACTTCGGCTATGTC...AAGGAAATTAATAGAAAGCCTCATTGAATGGCTTTCAGCTAGCACATGGCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR GCA 90 bp TACAGACCCTTAGACCAACTAGGGAACAAAAAGCAAGCATTTCAAGTTACCTATGACATAGCCGAAGTCTaGTGTTTGATGCCAACGGAT +
Preference number: 4 (lower is better)
Translates to: YRPLDQLGNKKQAFQVTYDIAEV*CLMPTD
Trigger: ATCCGTTGGCATCAAACAGCAGACTTCGGCTATGTC...ATAGGTAACTTGAAATGCTTGCTTTTTGTTCCCTAGTTGGTCTAAGGGTCTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR GCA 90 bp TATAAAGAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCAACTCGAACAACAGTTTaGCTCTGTTGCCCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: YKEHMNTSWPMWPLKSLPTRTTV*LCCPCV
Trigger: AACACAGGGGCAACAGAGGCAAACTGTTGTTCGAGT...TGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTCTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR GCA 90 bp CTAAATAAAATCTTGGCACTGACAAAGTTATTCCTGCTGTTTGGAGCTACACCATTCTATGGGGCCAGATaGATGAGAGGTCAAAGCATG +
Preference number: 4 (lower is better)
Translates to: LNKILALTKLFLLFGATPFYGAR*MRGQSM
Trigger: CATGCTTTGACCTCTCATGCATCTGGCCCCATAGAA...TGGTGTAGCTCCAAACAGCAGGAATAACTTTGTCAGTGCCAAGATTTTATTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR GCA 90 bp GAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCAATCCTGGCACCTCAGATAATGTaGTTTTTAGCTCAGTACACT +
Preference number: 4 (lower is better)
Translates to: EHMNTSWPMWPLKSLPILAPQIM*FLAQYT
Trigger: AGTGTACTGAGCTAAAAAGCACATTATCTGAGGTGC...CAGGATTGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR CCA 90 bp GAAGCTAAGCAGGGTCGGGCCTGGTTAGTACTTGGATGGGAGAAATTTTATAAAAGTTACAGAATCGTATaGAATGGACCCTTGTTTAGG +
Preference number: 4 (lower is better)
Translates to: EAKQGRAWLVLGWEKFYKSYRIV*NGPLFR
Trigger: CCTAAACAAGGGTCCATTCCATACGATTCTGTAACT...TTTATAAAATTTCTCCCATCCAAGTACTAACCAGGCCCGACCCTGCTTAGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp ATTGAGGTCCAATTTGTCTGTAGTTCAGAATTAGTCCAATACAGACCCTTAGACATATTGGACTCCCCCTaGTACCATACTACCCCTTTC +
Preference number: 4 (lower is better)
Translates to: IEVQFVCSSELVQYRPLDILDSP*YHTTPF
Trigger: GAAAGGGGTAGTATGGTACCAGGGGGAGTCCAATAT...GTCTAAGGGTCTGTATTGGACTAATTCTGAACTACAGACAAATTGGACCTCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp CTAAATAAAATCTTGGCACTGACAAAGTTATTCCTGCTGTTTGGAGCTACACCAAGTATTGGGCATCTTTaGGTTGGGGACATAGCCGAA +
Preference number: 4 (lower is better)
Translates to: LNKILALTKLFLLFGATPSIGHL*VGDIAE
Trigger: TTCGGCTATGTCCCCAACCCAAAGATGCCCAATACT...TGGTGTAGCTCCAAACAGCAGGAATAACTTTGTCAGTGCCAAGATTTTATTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR CCA 90 bp TATAAAGAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCAAGTATTGGGCATCTTTaGGTTGGGGACATAGCCGAA +
Preference number: 4 (lower is better)
Translates to: YKEHMNTSWPMWPLKSLPSIGHL*VGDIAE
Trigger: TTCGGCTATGTCCCCAACCCAAAGATGCCCAATACT...TGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTCTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp GAAGCTAAGCAGGGTCGGGCCTGGTTAGTACTTGGATGGGAGAAATTTTATAAATATCTTCTCAGGCAGTaGTCCTTCAAAGGTCAAATT +
Preference number: 4 (lower is better)
Translates to: EAKQGRAWLVLGWEKFYKYLLRQ*SFKGQI
Trigger: AATTTGACCTTTGAAGGACCACTGCCTGAGAAGATA...TTTATAAAATTTCTCCCATCCAAGTACTAACCAGGCCCGACCCTGCTTAGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp GATTCAGTAACCACCTGTCAGGAATTTTGTAAAGACGTCTACGGCCATATCACCTATCTTCTCAGGCAGTaGTCCTTCAAAGGTCAAATT +
Preference number: 4 (lower is better)
Translates to: DSVTTCQEFCKDVYGHITYLLRQ*SFKGQI
Trigger: AATTTGACCTTTGAAGGACCACTGCCTGAGAAGATA...GGTGATATGGCCGTAGACGTCTTTACAAAATTCCTGACAGGTGGTTACTGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp GAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCAATCCTGTATATGCTTGTCATGTaGCTTTACTTTCAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: EHMNTSWPMWPLKSLPILYMLVM*LYFQPH
Trigger: GTGAGGCTGAAAGTAAAGCCACATGACAAGCATATA...CAGGATTGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp TATAAAGAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCAGTTATTCCTGCTGTTTaGAGCTACACCAGAACCCCT +
Preference number: 4 (lower is better)
Translates to: YKEHMNTSWPMWPLKSLPVIPAV*SYTRTP
Trigger: AGGGGTTCTGGTGTAGCTCCAAACAGCAGGAATAAC...TGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTCTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR CCA 90 bp TGTAGTTCAGAATTAGTCCAATACAGACCCTTAGACCAACTAGGGAACAAAAAGTATGTGTATTGGGAGTaGAGGAGTGGACGGGTAGAT +
Preference number: 4 (lower is better)
Translates to: CSSELVQYRPLDQLGNKKYVYWE*RSGRVD
Trigger: ATCTACCCGTCCACTCCTCCACTCCCAATACACATA...CTTTTTGTTCCCTAGTTGGTCTAAGGGTCTGTATTGGACTAATTCTGAACTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR TCA 90 bp GAAGCTAAGCAGGGTCGGGCCTGGTTAGTACTTGGATGGGAGAAATTTTATAAAGCACCATATCATTATTaGTGTATGAAGCAAAGCGAA +
Preference number: 4 (lower is better)
Translates to: EAKQGRAWLVLGWEKFYKAPYHY*CMKQSE
Trigger: TTCGCTTTGCTTCATACATCAATAATGATATGGTGC...TTTATAAAATTTCTCCCATCCAAGTACTAACCAGGCCCGACCCTGCTTAGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR TCA 90 bp AACAGCCATGTGCTAGCTGAAAGCCATTCAATGAGGCTTTCTATTAATTTCCTTGGGAAATCCATCGTCTaGGCTCTTCTTAGACAAATC +
Preference number: 4 (lower is better)
Translates to: NSHVLAESHSMRLSINFLGKSIV*ALLRQI
Trigger: GATTTGTCTAAGAAGAGCTCAGACGATGGATTTCCC...AAGGAAATTAATAGAAAGCCTCATTGAATGGCTTTCAGCTAGCACATGGCTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR TCA 90 bp GAAGCTAAGCAGGGTCGGGCCTGGTTAGTACTTGGATGGGAGAAATTTTATAAACTAAATGCTAAAATCTaGAGGACCCATCCTTATATC +
Preference number: 4 (lower is better)
Translates to: EAKQGRAWLVLGWEKFYKLNAKI*RTHPYI
Trigger: GATATAAGGATGGGTCCTTCAGATTTTAGCATTTAG...TTTATAAAATTTCTCCCATCCAAGTACTAACCAGGCCCGACCCTGCTTAGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR TCA 90 bp GATTCAGTAACCACCTGTCAGGAATTTTGTAAAGACGTCTACGGCCATATCACCTTTATAAAGAACACATaGACACTAGCTGGCCTATGT +
Preference number: 4 (lower is better)
Translates to: DSVTTCQEFCKDVYGHITFIKNT*TLAGLC
Trigger: ACATAGGCCAGCTAGTGTTCATGTGTTCTTTATAAA...GGTGATATGGCCGTAGACGTCTTTACAAAATTCCTGACAGGTGGTTACTGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR TCA 90 bp GAAGCTAAGCAGGGTCGGGCCTGGTTAGTACTTGGATGGGAGAAATTTTATAAATTTATAAAGAACACATaGACACTAGCTGGCCTATGT +
Preference number: 4 (lower is better)
Translates to: EAKQGRAWLVLGWEKFYKFIKNT*TLAGLC
Trigger: ACATAGGCCAGCTAGTGTTCATGTGTTCTTTATAAA...TTTATAAAATTTCTCCCATCCAAGTACTAACCAGGCCCGACCCTGCTTAGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR TCA 90 bp TATAAAGAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCAAGTGGACGGGTAGATTaGCTTTTTCTCAGGCATCAA +
Preference number: 4 (lower is better)
Translates to: YKEHMNTSWPMWPLKSLPSGRVD*LFLRHQ
Trigger: TTGATGCCTGAGAAAAAGTCAATCTACCCGTCCACT...TGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTCTTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR TCA 90 bp GATTCAGTAACCACCTGTCAGGAATTTTGTAAAGACGTCTACGGCCATATCACCTTCATAATTGCCAATTaGGGACAACACAAATGGGAT +
Preference number: 4 (lower is better)
Translates to: DSVTTCQEFCKDVYGHITFIIAN*GQHKWD
Trigger: ATCCCATTTGTGTTGTCCTCAATTGGCAATTATGAA...GGTGATATGGCCGTAGACGTCTTTACAAAATTCCTGACAGGTGGTTACTGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR TCA 90 bp TACAGACCCTTAGACCAACTAGGGAACAAAAAGCAAGCATTTCAAGTTACCTATTGGAGTGGTGAGAATTaGATGGTTAATGCACTGCCA +
Preference number: 4 (lower is better)
Translates to: YRPLDQLGNKKQAFQVTYWSGEN*MVNALP
Trigger: TGGCAGTGCATTAACCATTCAATTCTCACCACTCCA...ATAGGTAACTTGAAATGCTTGCTTTTTGTTCCCTAGTTGGTCTAAGGGTCTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR GCA 90 bp ATTGAGGTCCAATTTGTCTGTAGTTCAGAATTAGTCCAATACAGACCCTTAGACCCAGTCTTCGATGAGTaGAGGGAATGTGCAATTGTA +
Preference number: 4 (lower is better)
Translates to: IEVQFVCSSELVQYRPLDPVFDE*RECAIV
Trigger: TACAATTGCACATTCCCTGCACTCATCGAAGACTGG...GTCTAAGGGTCTGTATTGGACTAATTCTGAACTACAGACAAATTGGACCTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR GCA 90 bp TGTAGTTCAGAATTAGTCCAATACAGACCCTTAGACCAACTAGGGAACAAAAAGTGGTATAGGGGACACTaGTTATATTCACAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: CSSELVQYRPLDQLGNKKWYRGH*LYSQGH
Trigger: GTGGCCTTGTGAATATAAGCAGTGTCCCCTATACCA...CTTTTTGTTCCCTAGTTGGTCTAAGGGTCTGTATTGGACTAATTCTGAACTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp TGTAGTTCAGAATTAGTCCAATACAGACCCTTAGACCAACTAGGGAACAAAAAGACAGTGGATGGATCATaGCATTCCAGAGAACAGAGT +
Preference number: 4 (lower is better)
Translates to: CSSELVQYRPLDQLGNKKTVDGS*HSREQS
Trigger: ACTCTGTTCTCTGGAATGCCATGATCCATCCACTGT...CTTTTTGTTCCCTAGTTGGTCTAAGGGTCTGTATTGGACTAATTCTGAACTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp GAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCAATCCTGAAATCTGAAGATAACTaGACAAGTCCAAATGGGAAG +
Preference number: 4 (lower is better)
Translates to: EHMNTSWPMWPLKSLPILKSEDN*TSPNGK
Trigger: CTTCCCATTTGGACTTGTCCAGTTATCTTCAGATTT...CAGGATTGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp CTAAATAAAATCTTGGCACTGACAAAGTTATTCCTGCTGTTTGGAGCTACACCACTGTTACAAGGTTCATaGTTTCTATGGGGCCAGATG +
Preference number: 4 (lower is better)
Translates to: LNKILALTKLFLLFGATPLLQGS*FLWGQM
Trigger: CATCTGGCCCCATAGAAACCATGAACCTTGTAACAG...TGGTGTAGCTCCAAACAGCAGGAATAACTTTGTCAGTGCCAAGATTTTATTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR GCA 90 bp TATAAAGAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCATGTAACACAGTCATCTaGATGTTACTCTGCCCACTA +
Preference number: 4 (lower is better)
Translates to: YKEHMNTSWPMWPLKSLPCNTVI*MLLCPL
Trigger: TAGTGGGCAGAGTAACATGCAGATGACTGTGTTACA...TGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTCTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR GCA 90 bp ATTGAGGTCCAATTTGTCTGTAGTTCAGAATTAGTCCAATACAGACCCTTAGACCTTTCAGAGTCATATTaGACAGTGGATGGATCATGG +
Preference number: 4 (lower is better)
Translates to: IEVQFVCSSELVQYRPLDLSESY*TVDGSW
Trigger: CCATGATCCATCCACTGTGCAATATGACTCTGAAAG...GTCTAAGGGTCTGTATTGGACTAATTCTGAACTACAGACAAATTGGACCTCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR GCA 90 bp ATTGAGGTCCAATTTGTCTGTAGTTCAGAATTAGTCCAATACAGACCCTTAGACTGCATCGATGGTCACTaGAACAGGAGATCTCAAATA +
Preference number: 4 (lower is better)
Translates to: IEVQFVCSSELVQYRPLDCIDGH*NRRSQI
Trigger: TATTTGAGATCTCCTGTTGCAGTGACCATCGATGCA...GTCTAAGGGTCTGTATTGGACTAATTCTGAACTACAGACAAATTGGACCTCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR GCA 90 bp AACAGCCATGTGCTAGCTGAAAGCCATTCAATGAGGCTTTCTATTAATTTCCTTTGCATCGATGGTCACTaGAACAGGAGATCTCAAATA +
Preference number: 4 (lower is better)
Translates to: NSHVLAESHSMRLSINFLCIDGH*NRRSQI
Trigger: TATTTGAGATCTCCTGTTGCAGTGACCATCGATGCA...AAGGAAATTAATAGAAAGCCTCATTGAATGGCTTTCAGCTAGCACATGGCTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp TATAAAGAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCAATATTGCACAGTGGATaGATCATGGCATTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: YKEHMNTSWPMWPLKSLPILHSG*IMAFQR
Trigger: TCTCTGGAATGCCATGATCCATCCACTGTGCAATAT...TGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTCTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp TGTAGTTCAGAATTAGTCCAATACAGACCCTTAGACCAACTAGGGAACAAAAAGATATTGCACAGTGGATaGATCATGGCATTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: CSSELVQYRPLDQLGNKKILHSG*IMAFQR
Trigger: TCTCTGGAATGCCATGATCCATCCACTGTGCAATAT...CTTTTTGTTCCCTAGTTGGTCTAAGGGTCTGTATTGGACTAATTCTGAACTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp TATAAAGAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCAAGTCATATTGCACAGTaGATGGATCATGGCATTCCA +
Preference number: 4 (lower is better)
Translates to: YKEHMNTSWPMWPLKSLPSHIAQ*MDHGIP
Trigger: TGGAATGCCATGATCCATCCACTGTGCAATATGACT...TGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTCTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp ATTGAGGTCCAATTTGTCTGTAGTTCAGAATTAGTCCAATACAGACCCTTAGACAGTCATATTGCACAGTaGATGGATCATGGCATTCCA +
Preference number: 4 (lower is better)
Translates to: IEVQFVCSSELVQYRPLDSHIAQ*MDHGIP
Trigger: TGGAATGCCATGATCCATCCACTGTGCAATATGACT...GTCTAAGGGTCTGTATTGGACTAATTCTGAACTACAGACAAATTGGACCTCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp GAAGCTAAGCAGGGTCGGGCCTGGTTAGTACTTGGATGGGAGAAATTTTATAAATGTTATAATTTATATTaGACTCCCCCTGGTACCATA +
Preference number: 4 (lower is better)
Translates to: EAKQGRAWLVLGWEKFYKCYNLY*TPPGTI
Trigger: TATGGTACCAGGGGGAGTCCAATATAAATTATAACA...TTTATAAAATTTCTCCCATCCAAGTACTAACCAGGCCCGACCCTGCTTAGCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
3UTR CAA 72 bp AAGAGCCTGAGATTTATATTTAACTCGAACAACAGTTaGCCTCTGTTGCCCCTGTGTTCATGTTTTCCTAAG +
Preference number: 4 (lower is better)
Translates to: KSLRFIFNSNNS*PLLPLCSCFPK
Trigger: CTTAGGAAAACATGAACACAGGGGCAACAGAGGCAAACTGTTGTTCGAGTTAAATATAAATCTCAGGCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR TCA 90 bp TATAAAGAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCACCCACTATTACAGCCTaGGTAATACCCGTATTAAAA +
Preference number: 4 (lower is better)
Translates to: YKEHMNTSWPMWPLKSLPPTITA*VIPVLK
Trigger: TTTTAATACGGGTATTACTCAGGCTGTAATAGTGGG...TGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTCTTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR CCA 90 bp TGTAGTTCAGAATTAGTCCAATACAGACCCTTAGACCAACTAGGGAACAAAAAGGTGGTGAGAATTGAATaGTTAATGCACTGCCATTCA +
Preference number: 4 (lower is better)
Translates to: CSSELVQYRPLDQLGNKKVVRIE*LMHCHS
Trigger: TGAATGGCAGTGCATTAACCATTCAATTCTCACCAC...CTTTTTGTTCCCTAGTTGGTCTAAGGGTCTGTATTGGACTAATTCTGAACTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263593.8
3UTR CAA 72 bp AGATTTATATTTAACTCGAACAACAGTTTGCCTCTGTaGCCCCTGTGTTCATGTTTTCCTAAGCCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: RFIFNSNNSLPL*PLCSCFPKPEF
Trigger: AAACTCTGGCTTAGGAAAACATGAACACAGGGGCAACAGAGGCAAACTGTTGTTCGAGTTAAATATAAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR TCA 90 bp CTAAATAAAATCTTGGCACTGACAAAGTTATTCCTGCTGTTTGGAGCTACACCACTGAAAGCCATTCAATaGGGCTTTCTATTAATTTCC +
Preference number: 4 (lower is better)
Translates to: LNKILALTKLFLLFGATPLKAIQ*GFLLIS
Trigger: GGAAATTAATAGAAAGCCTCATTGAATGGCTTTCAG...TGGTGTAGCTCCAAACAGCAGGAATAACTTTGTCAGTGCCAAGATTTTATTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR TCA 90 bp TATAAAGAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCAGAGGCTTCCACAAACTaGAACACTCTAAATCTATAT +
Preference number: 4 (lower is better)
Translates to: YKEHMNTSWPMWPLKSLPEASTN*NTLNLY
Trigger: ATATAGATTTAGAGTGTTTCAGTTTGTGGAAGCCTC...TGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTCTTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR CCA 90 bp CTAAATAAAATCTTGGCACTGACAAAGTTATTCCTGCTGTTTGGAGCTACACCATACTTGAAATATCCATaGCCTAAGTTTTCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: LNKILALTKLFLLFGATPYLKYP*PKFSEV
Trigger: CACCTCAGAAAACTTAGGCCATGGATATTTCAAGTA...TGGTGTAGCTCCAAACAGCAGGAATAACTTTGTCAGTGCCAAGATTTTATTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR CCA 90 bp TACAGACCCTTAGACCAACTAGGGAACAAAAAGCAAGCATTTCAAGTTACCTATTACTTGAAATATCCATaGCCTAAGTTTTCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: YRPLDQLGNKKQAFQVTYYLKYP*PKFSEV
Trigger: CACCTCAGAAAACTTAGGCCATGGATATTTCAAGTA...ATAGGTAACTTGAAATGCTTGCTTTTTGTTCCCTAGTTGGTCTAAGGGTCTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp AACAGCCATGTGCTAGCTGAAAGCCATTCAATGAGGCTTTCTATTAATTTCCTTTGTTATAATTTATATTaGACTCCCCCTGGTACCATA +
Preference number: 4 (lower is better)
Translates to: NSHVLAESHSMRLSINFLCYNLY*TPPGTI
Trigger: TATGGTACCAGGGGGAGTCCAATATAAATTATAACA...AAGGAAATTAATAGAAAGCCTCATTGAATGGCTTTCAGCTAGCACATGGCTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CCA 90 bp CTAAATAAAATCTTGGCACTGACAAAGTTATTCCTGCTGTTTGGAGCTACACCAAAAAGTTCTTACATTTaGGGAAATGCAGTGAATTCC +
Preference number: 4 (lower is better)
Translates to: LNKILALTKLFLLFGATPKSSYI*GNAVNS
Trigger: GGAATTCACTGCATTTCCCCAAATGTAAGAACTTTT...TGGTGTAGCTCCAAACAGCAGGAATAACTTTGTCAGTGCCAAGATTTTATTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR CCA 90 bp TATAAAGAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCAATGCAACTGGATTTTTaGACCCTGTTAATAGCATTA +
Preference number: 4 (lower is better)
Translates to: YKEHMNTSWPMWPLKSLPMQLDF*TLLIAL
Trigger: TAATGCTATTAACAGGGTCCAAAAATCCAGTTGCAT...TGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTCTTTATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS TCA 90 bp ACCAGCCCGAGTACAAGCCCCGGCGCGACCATGCTTGCAAGGATCTaGCCGCCGCCTAGGACTGGGAAAGTGGGTTCCCGGCAGGGGCGG +
Preference number: 5 (lower is better)
Translates to: TSPSTSPGATMLARI*PPPRTGKVGSRQGR
Trigger: CCGCCCCTGCCGGGAACCCACTTTCCCAGTCCTAGGCGGCGGTCAGATCCTTGCAAGCATGGTCGCGCCGGGGCTTGTACTCGGGCTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436137.2
CDS CCA 90 bp GGACCCCACAGGCTTTCAGTGACCGTCCAGATGACCAGGCTTCAATaGGTGTCCCGCCCCAGCTGGAGGCGATCAGCCCGATGGGATACT +
Preference number: 5 (lower is better)
Translates to: GPHRLSVTVQMTRLQ*VSRPSWRRSARWDT
Trigger: AGTATCCCATCGGGCTGATCGCCTCCAGCTGGGGCGGGACACCCATTGAAGCCTGGTCATCTGGACGGTCACTGAAAGCCTGTGGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263593.8
ENST00000545756.5
ENST00000618733.4
CDS GCA 90 bp GGATTAATGGCAGCACCAGCCCGAGTACAAGCCCCGGCGCGACCATaGTTGCAAGGATCTGACCGCCGCCTAGGACTGGGAAAGTGGGTT +
Preference number: 5 (lower is better)
Translates to: GLMAAPARVQAPARP*LQGSDRRLGLGKWV
Trigger: AACCCACTTTCCCAGTCCTAGGCGGCGGTCAGATCCTTGCAAGCATGGTCGCGCCGGGGCTTGTACTCGGGCTGGTGCTGCCATTAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436137.2
CDS-3UTR CAA 90 bp CAGCCCAAGTGCCTTCGCTGGGCTACTCCCACCTGGCCCTTGCTTTTCATTCCTGATGGTTTCCTGACCTaGGCGCAGGGTCACGGTCAC +
Preference number: 5 (lower is better)
Translates to: QPKCLRWATPTWPLLFIPDGFLT*AQGHGH
Trigger: GTGACCGTGACCCTGCGCCAAGGTCAGGAAACCATC...AGGAATGAAAAGCAAGGGCCAGGTGGGAGTAGCCCAGCGAAGGCACTTGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS CCA 90 bp AGGCTTCAATGGGTGTCCCGCCCCAGCTGGAGGCGATCAGCCCGATaGGATACTGCAGAGTGTCATAAAGGTGACGTCCAAAGAGCCAGC +
Preference number: 5 (lower is better)
Translates to: RLQWVSRPSWRRSAR*DTAECHKGDVQRAS
Trigger: GCTGGCTCTTTGGACGTCACCTTTATGACACTCTGCAGTATCCCATCGGGCTGATCGCCTCCAGCTGGGGCGGGACACCCATTGAAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263593.8
ENST00000545756.5
ENST00000618733.4
CDS CCA 90 bp GTGACCGTCCAGATGACCAGGCTTCAATGGGTGTCCCGCCCCAGCTaGAGGCGATCAGCCCGATGGGATACTGCAGAGTGTCATAAAGGT +
Preference number: 5 (lower is better)
Translates to: VTVQMTRLQWVSRPS*RRSARWDTAECHKG
Trigger: ACCTTTATGACACTCTGCAGTATCCCATCGGGCTGATCGCCTCCAGCTGGGGCGGGACACCCATTGAAGCCTGGTCATCTGGACGGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263593.8
ENST00000545756.5
ENST00000618733.4
CDS GCA 90 bp ATTCACAAGGCCACGTGGTCCAAGCATAGCGGAGAGCAACCACAGTaGCATGACAAGAATCGATCGCCAGGGTCAGGGACTGGGTGGAGA +
Preference number: 5 (lower is better)
Translates to: IHKATWSKHSGEQPQ*HDKNRSPGSGTGWR
Trigger: TCTCCACCCAGTCCCTGACCCTGGCGATCGATTCTTGTCATGGCACTGTGGTTGCTCTCCGCTATGCTTGGACCACGTGGCCTTGTGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263593.8
ENST00000545756.5
ENST00000618733.4
CDS-3UTR CAA 90 bp TCGAACAACAGTTTGCCTCTGTTGCCCCTGTGTTCATGTTTTCCTAAGCCAGAGCCGGCGCGACCATGCTaGCAAGGATCTGACCGCCGC +
Preference number: 5 (lower is better)
Translates to: SNNSLPLLPLCSCFPKPEPARPC*QGSDRR
Trigger: GCGGCGGTCAGATCCTTGCAAGCATGGTCGCGCCGG...CTCTGGCTTAGGAAAACATGAACACAGGGGCAACAGAGGCAAACTGTTGTTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR CAA 90 bp CAGCCCAAGTGCCTTCGCTGGGCTACTCCCACCTGGCCCTTGCTTTTCATTCCTGAAGCTGGAAGCCACTaGCATCGATGGTCACTGCAA +
Preference number: 5 (lower is better)
Translates to: QPKCLRWATPTWPLLFIPEAGSH*HRWSLQ
Trigger: TTGCAGTGACCATCGATGCAAGTGGCTTCCAGCTTC...AGGAATGAAAAGCAAGGGCCAGGTGGGAGTAGCCCAGCGAAGGCACTTGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CAA 90 bp CAGCCCAAGTGCCTTCGCTGGGCTACTCCCACCTGGCCCTTGCTTTTCATTCCTCTACACCAGAACCCCTaGGAACTCTACAGAGGGGTA +
Preference number: 5 (lower is better)
Translates to: QPKCLRWATPTWPLLFIPLHQNP*ELYRGV
Trigger: TACCCCTCTGTAGAGTTCCAAGGGGTTCTGGTGTAG...AGGAATGAAAAGCAAGGGCCAGGTGGGAGTAGCCCAGCGAAGGCACTTGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS CCA 90 bp GCAAGTCAACCGCAACAAGGTCCTCCAGCTCCTGCTCTGCTTGAATaGGAGAGACAGAGAGGATGCGGACAGACTGATATGCCGCAGTGT +
Preference number: 5 (lower is better)
Translates to: ASQPQQGPPAPALLE*ERQRGCGQTDMPQC
Trigger: ACACTGCGGCATATCAGTCTGTCCGCATCCTCTCTGTCTCTCCCATTCAAGCAGAGCAGGAGCTGGAGGACCTTGTTGCGGTTGACTTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263593.8
ENST00000533613.1
ENST00000545756.5
ENST00000618733.4
CDS CCA 90 bp AGTCCAAATGGGAAGAAACGCTCCGTCTGCCCCTGGGAACCACGGTaGAAGGTTTCACGCCAGTCTTCGATGAGTGCAGGGAATGTGCAA +
Preference number: 5 (lower is better)
Translates to: SPNGKKRSVCPWEPR*KVSRQSSMSAGNVQ
Trigger: TTGCACATTCCCTGCACTCATCGAAGACTGGCGTGAAACCTTCCACCGTGGTTCCCAGGGGCAGACGGAGCGTTTCTTCCCATTTGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263593.8
ENST00000545756.5
ENST00000618733.4
CDS-3UTR CAA 90 bp CAGCCCAAGTGCCTTCGCTGGGCTACTCCCACCTGGCCCTTGCTTTTCATTCCTAACTCGAACAACAGTTaGCCTCTGTTGCCCCTGTGT +
Preference number: 5 (lower is better)
Translates to: QPKCLRWATPTWPLLFIPNSNNS*PLLPLC
Trigger: ACACAGGGGCAACAGAGGCAAACTGTTGTTCGAGTT...AGGAATGAAAAGCAAGGGCCAGGTGGGAGTAGCCCAGCGAAGGCACTTGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS GCA 90 bp GGTCACGGTCACTGTGGCTCCAGGTGTACCGAAGCCCCATATCACTaGCCCAGCAGGCTCCTTCTGCAGCACCATATCATTATTGATGTA +
Preference number: 5 (lower is better)
Translates to: GHGHCGSRCTEAPYH*PSRLLLQHHIIIDV
Trigger: TACATCAATAATGATATGGTGCTGCAGAAGGAGCCTGCTGGGGCAGTGATATGGGGCTTCGGTACACCTGGAGCCACAGTGACCGTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263593.8
ENST00000436137.2
ENST00000533613.1
ENST00000545756.5
ENST00000618733.4
CDS CCA 90 bp GATAACTGGACAAGTCCAAATGGGAAGAAACGCTCCGTCTGCCCCTaGGAACCACGGTGGAAGGTTTCACGCCAGTCTTCGATGAGTGCA +
Preference number: 5 (lower is better)
Translates to: DNWTSPNGKKRSVCP*EPRWKVSRQSSMSA
Trigger: TGCACTCATCGAAGACTGGCGTGAAACCTTCCACCGTGGTTCCCAGGGGCAGACGGAGCGTTTCTTCCCATTTGGACTTGTCCAGTTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263593.8
ENST00000545756.5
ENST00000618733.4
CDS CCA 90 bp GATCGCCAGGGTCAGGGACTGGGTGGAGACGGTGTTCATAGAAGCTaGAAGCCACTTGCATCGATGGTCACTGCAACAGGAGATCTCAAA +
Preference number: 5 (lower is better)
Translates to: DRQGQGLGGDGVHRS*KPLASMVTATGDLK
Trigger: TTTGAGATCTCCTGTTGCAGTGACCATCGATGCAAGTGGCTTCCAGCTTCTATGAACACCGTCTCCACCCAGTCCCTGACCCTGGCGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263593.8
ENST00000545756.5
ENST00000618733.4
CDS-3UTR CAA 90 bp CCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGCCTCCTGTTCCTGGCAAAGTATTGGGCATCTTaGGGTTGGGGACATAGCCGA +
Preference number: 5 (lower is better)
Translates to: PCVHVFLSQSFPRLLFLAKYWAS*GWGHSR
Trigger: TCGGCTATGTCCCCAACCCAAAGATGCCCAATACTT...TGCCAGGAACAGGAGGCGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CAA 90 bp TATTCCTGCTGTTTGGAGCTACACCAGAACCCCTTGGAACTCTACAGAGGGGTAATGGGGGTATGTGTATaGGGAGTGGAGGAGTGGACG +
Preference number: 5 (lower is better)
Translates to: YSCCLELHQNPLELYRGVMGVCV*GVEEWT
Trigger: CGTCCACTCCTCCACTCCCAATACACATACCCCCAT...TACCCCTCTGTAGAGTTCCAAGGGGTTCTGGTGTAGCTCCAAACAGCAGGAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR CAA 90 bp TCGAACAACAGTTTGCCTCTGTTGCCCCTGTGTTCATGTTTTCCTAAGCCAGAGCTGGACTTAGAGTTCTaGGCTACCTCTGGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: SNNSLPLLPLCSCFPKPELDLEF*ATSGCP
Trigger: GGGGCAGCCAGAGGTAGCCAAGAACTCTAAGTCCAG...CTCTGGCTTAGGAAAACATGAACACAGGGGCAACAGAGGCAAACTGTTGTTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS CCA 90 bp TACTGGGGTGGTATAGGGGACACTGCTTATATTCACAAGGCCACGTaGTCCAAGCATAGCGGAGAGCAACCACAGTGCCATGACAAGAAT +
Preference number: 5 (lower is better)
Translates to: YWGGIGDTAYIHKAT*SKHSGEQPQCHDKN
Trigger: ATTCTTGTCATGGCACTGTGGTTGCTCTCCGCTATGCTTGGACCACGTGGCCTTGTGAATATAAGCAGTGTCCCCTATACCACCCCAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263593.8
ENST00000545756.5
ENST00000618733.4
CDS-3UTR CAA 90 bp GAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCAATCCTGGATGGTTTCCTGACCTaGGCGCAGGGTCACGGTCAC +
Preference number: 5 (lower is better)
Translates to: EHMNTSWPMWPLKSLPILDGFLT*AQGHGH
Trigger: GTGACCGTGACCCTGCGCCAAGGTCAGGAAACCATC...CAGGATTGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CAA 90 bp TCGAACAACAGTTTGCCTCTGTTGCCCCTGTGTTCATGTTTTCCTAAGCCAGAGGTATGGAATGGACCCTaGTTTAGGGACCCCACAGGC +
Preference number: 5 (lower is better)
Translates to: SNNSLPLLPLCSCFPKPEVWNGP*FRDPTG
Trigger: GCCTGTGGGGTCCCTAAACAAGGGTCCATTCCATAC...CTCTGGCTTAGGAAAACATGAACACAGGGGCAACAGAGGCAAACTGTTGTTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CAA 90 bp CAGCCCAAGTGCCTTCGCTGGGCTACTCCCACCTGGCCCTTGCTTTTCATTCCTAGGAACAGAATTGGTTaGGGCTTGAAGAGAATACAA +
Preference number: 5 (lower is better)
Translates to: QPKCLRWATPTWPLLFIPRNRIG*GLKRIQ
Trigger: TTGTATTCTCTTCAAGCCCAAACCAATTCTGTTCCT...AGGAATGAAAAGCAAGGGCCAGGTGGGAGTAGCCCAGCGAAGGCACTTGGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS TCA 90 bp TGCCCCAGCAGGCTCCTTCTGCAGCACCATATCATTATTGATGTATaGAGCAAAGCGAAAACCAATACCTGCACTTCTGTCGGCCCACAG +
Preference number: 5 (lower is better)
Translates to: CPSRLLLQHHIIIDV*SKAKTNTCTSVGPQ
Trigger: CTGTGGGCCGACAGAAGTGCAGGTATTGGTTTTCGCTTTGCTTCATACATCAATAATGATATGGTGCTGCAGAAGGAGCCTGCTGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000436137.2
CDS-3UTR CAA 90 bp GAAGCTAAGCAGGGTCGGGCCTGGTTAGTACTTGGATGGGAGAAATTTTATAAAGCCGAAGTCTGCTGTTaGATGCCAACGGATCTGGGG +
Preference number: 5 (lower is better)
Translates to: EAKQGRAWLVLGWEKFYKAEVCC*MPTDLG
Trigger: CCCCAGATCCGTTGGCATCAAACAGCAGACTTCGGC...TTTATAAAATTTCTCCCATCCAAGTACTAACCAGGCCCGACCCTGCTTAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CAA 90 bp AGTTTGCCTCTGTTGCCCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGAGTTATTCCTGCTGTTaGGAGCTACACCAGAACCCC +
Preference number: 5 (lower is better)
Translates to: SLPLLPLCSCFPKPEFPTSYSCC*ELHQNP
Trigger: GGGGTTCTGGTGTAGCTCCAAACAGCAGGAATAACT...CGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGGGCAACAGAGGCAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR CAA 90 bp CCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGCCTCCTGTTCCTGGCAATGGATTTAAGAAACTaGAAAAGCTGGGCACGGTGG +
Preference number: 5 (lower is better)
Translates to: PCVHVFLSQSFPRLLFLAMDLRN*KSWARW
Trigger: CCACCGTGCCCAGCTTTTCAAGTTTCTTAAATCCAT...TGCCAGGAACAGGAGGCGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR CAA 90 bp CAGCCCAAGTGCCTTCGCTGGGCTACTCCCACCTGGCCCTTGCTTTTCATTCCTATTCATAATTGCCAATaGAGGACAACACAAATGGGA +
Preference number: 5 (lower is better)
Translates to: QPKCLRWATPTWPLLFIPIHNCQ*RTTQMG
Trigger: TCCCATTTGTGTTGTCCTCAATTGGCAATTATGAAT...AGGAATGAAAAGCAAGGGCCAGGTGGGAGTAGCCCAGCGAAGGCACTTGGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS TCA 90 bp TCTGCCCCTGGGAACCACGGTGGAAGGTTTCACGCCAGTCTTCGATaGGTGCAGGGAATGTGCAATTGTACAGATCCGTGTTATAATTTA +
Preference number: 5 (lower is better)
Translates to: SAPGNHGGRFHASLR*VQGMCNCTDPCYNL
Trigger: TAAATTATAACACGGATCTGTACAATTGCACATTCCCTGCACTCATCGAAGACTGGCGTGAAACCTTCCACCGTGGTTCCCAGGGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263593.8
ENST00000545756.5
ENST00000618733.4
CDS CCA 90 bp ATTGAGCAGCCCCTTGTGAGCCAAGAGTTCTATCTTCTCAGGCAGTaGTCCTTCAAAGGTCAAATTCTTCTCACCATAAGCCAGAGCACG +
Preference number: 5 (lower is better)
Translates to: IEQPLVSQEFYLLRQ*SFKGQILLTISQST
Trigger: CGTGCTCTGGCTTATGGTGAGAAGAATTTGACCTTTGAAGGACCACTGCCTGAGAAGATAGAACTCTTGGCTCACAAGGGGCTGCTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263593.8
ENST00000545756.5
ENST00000618733.4
CDS CCA 90 bp ATCACAGAGATCCATAGCTACAGCCATGAAAGTATTGGGCATCTTTaGGTTGGGGACATAGCCGAAGTCTGCTGTTTGATGCCAACGGAT +
Preference number: 5 (lower is better)
Translates to: ITEIHSYSHESIGHL*VGDIAEVCCLMPTD
Trigger: ATCCGTTGGCATCAAACAGCAGACTTCGGCTATGTCCCCAACCCAAAGATGCCCAATACTTTCATGGCTGTAGCTATGGATCTCTGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263593.8
ENST00000545756.5
ENST00000618733.4
CDS-3UTR CAA 90 bp AGTTTGCCTCTGTTGCCCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGCCTTTCAGAGTCATATaGCACAGTGGATGGATCATG +
Preference number: 5 (lower is better)
Translates to: SLPLLPLCSCFPKPEFPTPFRVI*HSGWIM
Trigger: CATGATCCATCCACTGTGCAATATGACTCTGAAAGG...CGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGGGCAACAGAGGCAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CAA 90 bp CCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGCCTCCTGTTCCTGGCAATCTCAAATATCTTGTaGTCCTTTTTCTGCACCTGG +
Preference number: 5 (lower is better)
Translates to: PCVHVFLSQSFPRLLFLAISNIL*SFFCTW
Trigger: CCAGGTGCAGAAAAAGGACAACAAGATATTTGAGAT...TGCCAGGAACAGGAGGCGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CAA 90 bp CCCTGTGTTCATGTTTTCCTAAGCCAGAGTTTCCCACGCCTCCTGTTCCTGGCAAGGAACAGAATTGGTTaGGGCTTGAAGAGAATACAA +
Preference number: 5 (lower is better)
Translates to: PCVHVFLSQSFPRLLFLARNRIG*GLKRIQ
Trigger: TTGTATTCTCTTCAAGCCCAAACCAATTCTGTTCCT...TGCCAGGAACAGGAGGCGTGGGAAACTCTGGCTTAGGAAAACATGAACACAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS TCA 90 bp ATATCACTGCCCCAGCAGGCTCCTTCTGCAGCACCATATCATTATTaGTGTATGAAGCAAAGCGAAAACCAATACCTGCACTTCTGTCGG +
Preference number: 5 (lower is better)
Translates to: ISLPQQAPSAAPYHY*CMKQSENQYLHFCR
Trigger: CCGACAGAAGTGCAGGTATTGGTTTTCGCTTTGCTTCATACATCAATAATGATATGGTGCTGCAGAAGGAGCCTGCTGGGGCAGTGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000436137.2
CDS GCA 90 bp CCCCTGGGAACCACGGTGGAAGGTTTCACGCCAGTCTTCGATGAGTaGAGGGAATGTGCAATTGTACAGATCCGTGTTATAATTTATATT +
Preference number: 5 (lower is better)
Translates to: PLGTTVEGFTPVFDE*RECAIVQIRVIIYI
Trigger: AATATAAATTATAACACGGATCTGTACAATTGCACATTCCCTGCACTCATCGAAGACTGGCGTGAAACCTTCCACCGTGGTTCCCAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263593.8
ENST00000545756.5
ENST00000618733.4
CDS-3UTR CAA 90 bp AACAGCCATGTGCTAGCTGAAAGCCATTCAATGAGGCTTTCTATTAATTTCCTTGCCGAAGTCTGCTGTTaGATGCCAACGGATCTGGGG +
Preference number: 5 (lower is better)
Translates to: NSHVLAESHSMRLSINFLAEVCC*MPTDLG
Trigger: CCCCAGATCCGTTGGCATCAAACAGCAGACTTCGGC...AAGGAAATTAATAGAAAGCCTCATTGAATGGCTTTCAGCTAGCACATGGCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CAA 90 bp AACAGCCATGTGCTAGCTGAAAGCCATTCAATGAGGCTTTCTATTAATTTCCTTGTATGGAATGGACCCTaGTTTAGGGACCCCACAGGC +
Preference number: 5 (lower is better)
Translates to: NSHVLAESHSMRLSINFLVWNGP*FRDPTG
Trigger: GCCTGTGGGGTCCCTAAACAAGGGTCCATTCCATAC...AAGGAAATTAATAGAAAGCCTCATTGAATGGCTTTCAGCTAGCACATGGCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CAA 90 bp TATTCCTGCTGTTTGGAGCTACACCAGAACCCCTTGGAACTCTACAGAGGGGTATTTCTGCACCTGGATTaGCTGGTAATATGTGAGATT +
Preference number: 5 (lower is better)
Translates to: YSCCLELHQNPLELYRGVFLHLD*LVICEI
Trigger: AATCTCACATATTACCAGCAAATCCAGGTGCAGAAA...TACCCCTCTGTAGAGTTCCAAGGGGTTCTGGTGTAGCTCCAAACAGCAGGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR CAA 90 bp TATTCCTGCTGTTTGGAGCTACACCAGAACCCCTTGGAACTCTACAGAGGGGTACCACATGTAGAAAGGTaGAACTGGTTTTTCAGCTAT +
Preference number: 5 (lower is better)
Translates to: YSCCLELHQNPLELYRGVPHVER*NWFFSY
Trigger: ATAGCTGAAAAACCAGTTCAACCTTTCTACATGTGG...TACCCCTCTGTAGAGTTCCAAGGGGTTCTGGTGTAGCTCCAAACAGCAGGAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR CAA 90 bp TCGAACAACAGTTTGCCTCTGTTGCCCCTGTGTTCATGTTTTCCTAAGCCAGAGTTGCAGCAGCCTATTTaGAGAGCCTTCTCTTTGATA +
Preference number: 5 (lower is better)
Translates to: SNNSLPLLPLCSCFPKPELQQPI*RAFSLI
Trigger: TATCAAAGAGAAGGCTCTCAAAATAGGCTGCTGCAA...CTCTGGCTTAGGAAAACATGAACACAGGGGCAACAGAGGCAAACTGTTGTTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545756.5
CDS TCA 90 bp AGCTTGACAGAAAATGGGATGGAATCCCCTGGCATAGACTGCTGTTaGGAAAGCGACTATATAGATACAAACAGATCTGGTCCATGCCTT +
Preference number: 5 (lower is better)
Translates to: SLTENGMESPGIDCC*ESDYIDTNRSGPCL
Trigger: AAGGCATGGACCAGATCTGTTTGTATCTATATAGTCGCTTTCTCAACAGCAGTCTATGCCAGGGGATTCCATCCCATTTTCTGTCAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436137.2
CDS-3UTR CAA 90 bp GAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCAATCCTGTTTCTCCAAAGTCTGTaGTGCCATCACTTCGAAAGG +
Preference number: 5 (lower is better)
Translates to: EHMNTSWPMWPLKSLPILFLQSL*CHHFER
Trigger: CCTTTCGAAGTGATGGCACAACAGACTTTGGAGAAA...CAGGATTGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CAA 90 bp GAAGCTAAGCAGGGTCGGGCCTGGTTAGTACTTGGATGGGAGAAATTTTATAAACCTTTCAGAGTCATATaGCACAGTGGATGGATCATG +
Preference number: 5 (lower is better)
Translates to: EAKQGRAWLVLGWEKFYKPFRVI*HSGWIM
Trigger: CATGATCCATCCACTGTGCAATATGACTCTGAAAGG...TTTATAAAATTTCTCCCATCCAAGTACTAACCAGGCCCGACCCTGCTTAGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CAA 90 bp TGTAGTTCAGAATTAGTCCAATACAGACCCTTAGACCAACTAGGGAACAAAAAGGAAGCTGGAAGCCACTaGCATCGATGGTCACTGCAA +
Preference number: 5 (lower is better)
Translates to: CSSELVQYRPLDQLGNKKEAGSH*HRWSLQ
Trigger: TTGCAGTGACCATCGATGCAAGTGGCTTCCAGCTTC...CTTTTTGTTCCCTAGTTGGTCTAAGGGTCTGTATTGGACTAATTCTGAACTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CAA 90 bp GAAGCTAAGCAGGGTCGGGCCTGGTTAGTACTTGGATGGGAGAAATTTTATAAAAACAGTTTGCCTCTGTaGCCCCTGTGTTCATGTTTT +
Preference number: 5 (lower is better)
Translates to: EAKQGRAWLVLGWEKFYKNSLPL*PLCSCF
Trigger: AAAACATGAACACAGGGGCAACAGAGGCAAACTGTT...TTTATAAAATTTCTCCCATCCAAGTACTAACCAGGCCCGACCCTGCTTAGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CAA 90 bp GAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCAATCCTGAACAGTTTGCCTCTGTaGCCCCTGTGTTCATGTTTT +
Preference number: 5 (lower is better)
Translates to: EHMNTSWPMWPLKSLPILNSLPL*PLCSCF
Trigger: AAAACATGAACACAGGGGCAACAGAGGCAAACTGTT...CAGGATTGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS TCA 90 bp ATATCACTGCCCCAGCAGGCTCCTTCTGCAGCACCATATCATTATTaGTGTATGAAGCAAAGCGAAAACCAATACCAAGAAGATGTCGAT +
Preference number: 5 (lower is better)
Translates to: ISLPQQAPSAAPYHY*CMKQSENQYQEDVD
Trigger: ATCGACATCTTCTTGGTATTGGTTTTCGCTTTGCTTCATACATCAATAATGATATGGTGCTGCAGAAGGAGCCTGCTGGGGCAGTGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525730.1
ENST00000545756.5
ENST00000618733.4
CDS-3UTR CAA 90 bp TATAAAGAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCAAAGTATTGGGCATCTTaGGGTTGGGGACATAGCCGA +
Preference number: 5 (lower is better)
Translates to: YKEHMNTSWPMWPLKSLPKYWAS*GWGHSR
Trigger: TCGGCTATGTCCCCAACCCAAAGATGCCCAATACTT...TGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTCTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CAA 90 bp TGTAGTTCAGAATTAGTCCAATACAGACCCTTAGACCAACTAGGGAACAAAAAGACAGCCATGAAAGTATaGGGCATCTTTGGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: CSSELVQYRPLDQLGNKKTAMKV*GIFGLG
Trigger: CCCCAACCCAAAGATGCCCAATACTTTCATGGCTGT...CTTTTTGTTCCCTAGTTGGTCTAAGGGTCTGTATTGGACTAATTCTGAACTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CAA 90 bp ATTGAGGTCCAATTTGTCTGTAGTTCAGAATTAGTCCAATACAGACCCTTAGACACAGCCATGAAAGTATaGGGCATCTTTGGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: IEVQFVCSSELVQYRPLDTAMKV*GIFGLG
Trigger: CCCCAACCCAAAGATGCCCAATACTTTCATGGCTGT...GTCTAAGGGTCTGTATTGGACTAATTCTGAACTACAGACAAATTGGACCTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CAA 90 bp GAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCAATCCTGCTCTGCATAAATGGCTaGAGCATACTGGCATTTACA +
Preference number: 5 (lower is better)
Translates to: EHMNTSWPMWPLKSLPILLCING*SILAFT
Trigger: TGTAAATGCCAGTATGCTCAAGCCATTTATGCAGAG...CAGGATTGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS CCA 90 bp CATAGACTGCTGTTGAGAAAGCGACTATATAGATACAAACAGATCTaGTCCATGCCTTTCTGTGCAAACAGGGAACTGCAATTACAGCAT +
Preference number: 5 (lower is better)
Translates to: HRLLLRKRLYRYKQI*SMPFCANRELQLQH
Trigger: ATGCTGTAATTGCAGTTCCCTGTTTGCACAGAAAGGCATGGACCAGATCTGTTTGTATCTATATAGTCGCTTTCTCAACAGCAGTCTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436137.2
CDS-3UTR CAA 90 bp GAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCAATCCTGTTTCTGCACCTGGATTaGCTGGTAATATGTGAGATT +
Preference number: 5 (lower is better)
Translates to: EHMNTSWPMWPLKSLPILFLHLD*LVICEI
Trigger: AATCTCACATATTACCAGCAAATCCAGGTGCAGAAA...CAGGATTGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CAA 90 bp GAAGCTAAGCAGGGTCGGGCCTGGTTAGTACTTGGATGGGAGAAATTTTATAAACATGCAACTGGATTTTaGGACCCTGTTAATAGCATT +
Preference number: 5 (lower is better)
Translates to: EAKQGRAWLVLGWEKFYKHATGF*DPVNSI
Trigger: AATGCTATTAACAGGGTCCAAAAATCCAGTTGCATG...TTTATAAAATTTCTCCCATCCAAGTACTAACCAGGCCCGACCCTGCTTAGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR CAA 90 bp GAAGCTAAGCAGGGTCGGGCCTGGTTAGTACTTGGATGGGAGAAATTTTATAAAACAATATACCAGCTTTaGCAGCAGCCTATTTTGAGA +
Preference number: 5 (lower is better)
Translates to: EAKQGRAWLVLGWEKFYKTIYQL*QQPILR
Trigger: TCTCAAAATAGGCTGCTGCAAAAGCTGGTATATTGT...TTTATAAAATTTCTCCCATCCAAGTACTAACCAGGCCCGACCCTGCTTAGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545756.5
CDS-3UTR CAA 90 bp ATTGAGGTCCAATTTGTCTGTAGTTCAGAATTAGTCCAATACAGACCCTTAGACTTTCTCCAAAGTCTGTaGTGCCATCACTTCGAAAGG +
Preference number: 5 (lower is better)
Translates to: IEVQFVCSSELVQYRPLDFLQSL*CHHFER
Trigger: CCTTTCGAAGTGATGGCACAACAGACTTTGGAGAAA...GTCTAAGGGTCTGTATTGGACTAATTCTGAACTACAGACAAATTGGACCTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CAA 90 bp TACAGACCCTTAGACCAACTAGGGAACAAAAAGCAAGCATTTCAAGTTACCTATGAATTCCACAAGGATTaGGGAATCTTCTTGAAGGGC +
Preference number: 5 (lower is better)
Translates to: YRPLDQLGNKKQAFQVTYEFHKD*GIFLKG
Trigger: GCCCTTCAAGAAGATTCCCAAATCCTTGTGGAATTC...ATAGGTAACTTGAAATGCTTGCTTTTTGTTCCCTAGTTGGTCTAAGGGTCTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545756.5
CDS-3UTR CAA 90 bp TATAAAGAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCAACTGCTGACATGTACTaGAAATATCCATGGCCTAAG +
Preference number: 5 (lower is better)
Translates to: YKEHMNTSWPMWPLKSLPTADMY*KYPWPK
Trigger: CTTAGGCCATGGATATTTCAAGTACATGTCAGCAGT...TGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTCTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CAA 90 bp ATTGAGGTCCAATTTGTCTGTAGTTCAGAATTAGTCCAATACAGACCCTTAGACACTGCTGACATGTACTaGAAATATCCATGGCCTAAG +
Preference number: 5 (lower is better)
Translates to: IEVQFVCSSELVQYRPLDTADMY*KYPWPK
Trigger: CTTAGGCCATGGATATTTCAAGTACATGTCAGCAGT...GTCTAAGGGTCTGTATTGGACTAATTCTGAACTACAGACAAATTGGACCTCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CAA 90 bp TGTAGTTCAGAATTAGTCCAATACAGACCCTTAGACCAACTAGGGAACAAAAAGTTCAGACCGTCTTCATaGTATTTCTCACGGACATAC +
Preference number: 5 (lower is better)
Translates to: CSSELVQYRPLDQLGNKKFRPSS*YFSRTY
Trigger: GTATGTCCGTGAGAAATACAATGAAGACGGTCTGAA...CTTTTTGTTCCCTAGTTGGTCTAAGGGTCTGTATTGGACTAATTCTGAACTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545756.5
CDS-3UTR CAA 90 bp AACAGCCATGTGCTAGCTGAAAGCCATTCAATGAGGCTTTCTATTAATTTCCTTATCTCAAATATCTTGTaGTCCTTTTTCTGCACCTGG +
Preference number: 5 (lower is better)
Translates to: NSHVLAESHSMRLSINFLISNIL*SFFCTW
Trigger: CCAGGTGCAGAAAAAGGACAACAAGATATTTGAGAT...AAGGAAATTAATAGAAAGCCTCATTGAATGGCTTTCAGCTAGCACATGGCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CAA 90 bp TATAAAGAACACATGAACACTAGCTGGCCTATGTGGCCTTTAAAATCTCTTCCAAAGTTGTTTAATCCTTaGGGAGGGTTAAGCTGTAGA +
Preference number: 5 (lower is better)
Translates to: YKEHMNTSWPMWPLKSLPKLFNP*GGLSCR
Trigger: TCTACAGCTTAACCCTCCCAAAGGATTAAACAACTT...TGGAAGAGATTTTAAAGGCCACATAGGCCAGCTAGTGTTCATGTGTTCTTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263593.8
CDS-3UTR CAA 90 bp TACAGACCCTTAGACCAACTAGGGAACAAAAAGCAAGCATTTCAAGTTACCTATAGCACCATATCATTATaGATGTATGAAGCAAAGCGA +
Preference number: 5 (lower is better)
Translates to: YRPLDQLGNKKQAFQVTYSTISL*MYEAKR
Trigger: TCGCTTTGCTTCATACATCAATAATGATATGGTGCT...ATAGGTAACTTGAAATGCTTGCTTTTTGTTCCCTAGTTGGTCTAAGGGTCTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CAA 90 bp AACAGCCATGTGCTAGCTGAAAGCCATTCAATGAGGCTTTCTATTAATTTCCTTAGCACCATATCATTATaGATGTATGAAGCAAAGCGA +
Preference number: 5 (lower is better)
Translates to: NSHVLAESHSMRLSINFLSTISL*MYEAKR
Trigger: TCGCTTTGCTTCATACATCAATAATGATATGGTGCT...AAGGAAATTAATAGAAAGCCTCATTGAATGGCTTTCAGCTAGCACATGGCTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS-3UTR CAA 90 bp ATTGAGGTCCAATTTGTCTGTAGTTCAGAATTAGTCCAATACAGACCCTTAGACAGAATTGGTTTGGGCTaGAAGAGAATACAAAGAGAT +
Preference number: 5 (lower is better)
Translates to: IEVQFVCSSELVQYRPLDRIGLG*KRIQRD
Trigger: ATCTCTTTGTATTCTCTTCAAGCCCAAACCAATTCT...GTCTAAGGGTCTGTATTGGACTAATTCTGAACTACAGACAAATTGGACCTCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000545756.5
CDS GCA 72 bp GCAGCACCAGCCCGAGTACAAGCCCCGGCGCGACCATaGTTGCAAGGATCTGACCGCCGCCTAGGACTGGGA +
Preference number: 6 (lower is better)
Translates to: AAPARVQAPARP*LQGSDRRLGLG
Trigger: TCCCAGTCCTAGGCGGCGGTCAGATCCTTGCAAGCATGGTCGCGCCGGGGCTTGTACTCGGGCTGGTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436137.2
CDS CAA 72 bp GCACCAGCCCGAGTACAAGCCCCGGCGCGACCATGCTaGCAAGGATCTGACCGCCGCCTAGGACTGGGAAAG +
Preference number: 6 (lower is better)
Translates to: APARVQAPARPC*QGSDRRLGLGK
Trigger: CTTTCCCAGTCCTAGGCGGCGGTCAGATCCTTGCAAGCATGGTCGCGCCGGGGCTTGTACTCGGGCTGGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436137.2
CDS TCA 72 bp AGTACAAGCCCCGGCGCGACCATGCTTGCAAGGATCTaGCCGCCGCCTAGGACTGGGAAAGTGGGTTCCCGG +
Preference number: 6 (lower is better)
Translates to: STSPGATMLARI*PPPRTGKVGSR
Trigger: CCGGGAACCCACTTTCCCAGTCCTAGGCGGCGGTCAGATCCTTGCAAGCATGGTCGCGCCGGGGCTTGTACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436137.2
CDS CAA 90 bp TTAATGGCAGCACCAGCCCGAGTACAAGCCCCGGCGCGACCATGCTaGCAAGGATCTGACCGCCGCCTAGGACTGGGAAAGTGGGTTCCC +
Preference number: 6 (lower is better)
Translates to: LMAAPARVQAPARPC*QGSDRRLGLGKWVP
Trigger: GGGAACCCACTTTCCCAGTCCTAGGCGGCGGTCAGATCCTTGCAAGCATGGTCGCGCCGGGGCTTGTACTCGGGCTGGTGCTGCCATTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436137.2
CDS CCA 72 bp AGGCTTTCAGTGACCGTCCAGATGACCAGGCTTCAATaGGTGTCCCGCCCCAGCTGGAGGCGATCAGCCCGA +
Preference number: 6 (lower is better)
Translates to: RLSVTVQMTRLQ*VSRPSWRRSAR
Trigger: TCGGGCTGATCGCCTCCAGCTGGGGCGGGACACCCATTGAAGCCTGGTCATCTGGACGGTCACTGAAAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263593.8
ENST00000545756.5
ENST00000618733.4
CDS CCA 72 bp TGGTTTCCTGACCTTGGCGCAGGGTCACGGTCACTGTaGCTCCAGGTGTACCGAAGCCCCATATCACTGCCC +
Preference number: 6 (lower is better)
Translates to: WFPDLGAGSRSL*LQVYRSPISLP
Trigger: GGGCAGTGATATGGGGCTTCGGTACACCTGGAGCCACAGTGACCGTGACCCTGCGCCAAGGTCAGGAAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263593.8
ENST00000436137.2
ENST00000533613.1
ENST00000545756.5
ENST00000618733.4
CDS CCA 72 bp CAGATGACCAGGCTTCAATGGGTGTCCCGCCCCAGCTaGAGGCGATCAGCCCGATGGGATACTGCAGAGTGT +
Preference number: 6 (lower is better)
Translates to: QMTRLQWVSRPS*RRSARWDTAEC
Trigger: ACACTCTGCAGTATCCCATCGGGCTGATCGCCTCCAGCTGGGGCGGGACACCCATTGAAGCCTGGTCATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263593.8
ENST00000545756.5
ENST00000618733.4
CDS CCA 72 bp GGGAAGAAACGCTCCGTCTGCCCCTGGGAACCACGGTaGAAGGTTTCACGCCAGTCTTCGATGAGTGCAGGG +
Preference number: 6 (lower is better)
Translates to: GKKRSVCPWEPR*KVSRQSSMSAG
Trigger: CCCTGCACTCATCGAAGACTGGCGTGAAACCTTCCACCGTGGTTCCCAGGGGCAGACGGAGCGTTTCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263593.8
ENST00000545756.5
ENST00000618733.4
CDS CCA 72 bp TGGGTGTCCCGCCCCAGCTGGAGGCGATCAGCCCGATaGGATACTGCAGAGTGTCATAAAGGTGACGTCCAA +
Preference number: 6 (lower is better)
Translates to: WVSRPSWRRSAR*DTAECHKGDVQ
Trigger: TTGGACGTCACCTTTATGACACTCTGCAGTATCCCATCGGGCTGATCGCCTCCAGCTGGGGCGGGACACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263593.8
ENST00000545756.5
ENST00000618733.4
CDS GCA 72 bp CACTGTGGCTCCAGGTGTACCGAAGCCCCATATCACTaGCCCAGCAGGCTCCTTCTGCAGCACCATATCATT +
Preference number: 6 (lower is better)
Translates to: HCGSRCTEAPYH*PSRLLLQHHII
Trigger: AATGATATGGTGCTGCAGAAGGAGCCTGCTGGGGCAGTGATATGGGGCTTCGGTACACCTGGAGCCACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263593.8
ENST00000436137.2
ENST00000533613.1
ENST00000545756.5
ENST00000618733.4
CDS CCA 72 bp ACAAGTCCAAATGGGAAGAAACGCTCCGTCTGCCCCTaGGAACCACGGTGGAAGGTTTCACGCCAGTCTTCG +
Preference number: 6 (lower is better)
Translates to: TSPNGKKRSVCP*EPRWKVSRQSS
Trigger: CGAAGACTGGCGTGAAACCTTCCACCGTGGTTCCCAGGGGCAGACGGAGCGTTTCTTCCCATTTGGACTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263593.8
ENST00000545756.5
ENST00000618733.4
CDS CAA 90 bp GTGAGCTTTCACACTGGTCACTTTCTTCATGATGGTTTCCTGACCTaGGCGCAGGGTCACGGTCACTGTGGCTCCAGGTGTACCGAAGCC +
Preference number: 6 (lower is better)
Translates to: VSFHTGHFLHDGFLT*AQGHGHCGSRCTEA
Trigger: GGCTTCGGTACACCTGGAGCCACAGTGACCGTGACCCTGCGCCAAGGTCAGGAAACCATCATGAAGAAAGTGACCAGTGTGAAAGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263593.8
ENST00000436137.2
ENST00000533613.1
ENST00000545756.5
ENST00000618733.4
CDS GCA 72 bp CCATGGCCTAAGTTTTCTGAGGTGGGCTTAGACCACTaGAAGTCAACCGCAACAAGGTCCTCCAGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: PWPKFSEVGLDH*KSTATRSSSSC
Trigger: GCAGGAGCTGGAGGACCTTGTTGCGGTTGACTTGCAGTGGTCTAAGCCCACCTCAGAAAACTTAGGCCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263593.8
ENST00000545756.5
ENST00000618733.4
CDS CCA 72 bp CCGCAACAAGGTCCTCCAGCTCCTGCTCTGCTTGAATaGGAGAGACAGAGAGGATGCGGACAGACTGATATG +
Preference number: 6 (lower is better)
Translates to: PQQGPPAPALLE*ERQRGCGQTDM
Trigger: CATATCAGTCTGTCCGCATCCTCTCTGTCTCTCCCATTCAAGCAGAGCAGGAGCTGGAGGACCTTGTTGCGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263593.8
ENST00000533613.1
ENST00000545756.5
ENST00000618733.4
CDS CAA 72 bp CACACTGGTCACTTTCTTCATGATGGTTTCCTGACCTaGGCGCAGGGTCACGGTCACTGTGGCTCCAGGTGT +
Preference number: 6 (lower is better)
Translates to: HTGHFLHDGFLT*AQGHGHCGSRC
Trigger: ACACCTGGAGCCACAGTGACCGTGACCCTGCGCCAAGGTCAGGAAACCATCATGAAGAAAGTGACCAGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263593.8
ENST00000436137.2
ENST00000533613.1
ENST00000545756.5
ENST00000618733.4
CDS TCA 72 bp GGGAACCACGGTGGAAGGTTTCACGCCAGTCTTCGATaGGTGCAGGGAATGTGCAATTGTACAGATCCGTGT +
Preference number: 6 (lower is better)
Translates to: GNHGGRFHASLR*VQGMCNCTDPC
Trigger: ACACGGATCTGTACAATTGCACATTCCCTGCACTCATCGAAGACTGGCGTGAAACCTTCCACCGTGGTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263593.8
ENST00000545756.5
ENST00000618733.4
CDS CCA 72 bp GGTATAGGGGACACTGCTTATATTCACAAGGCCACGTaGTCCAAGCATAGCGGAGAGCAACCACAGTGCCAT +
Preference number: 6 (lower is better)
Translates to: GIGDTAYIHKAT*SKHSGEQPQCH
Trigger: ATGGCACTGTGGTTGCTCTCCGCTATGCTTGGACCACGTGGCCTTGTGAATATAAGCAGTGTCCCCTATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263593.8
ENST00000545756.5
ENST00000618733.4
CDS GCA 72 bp ATTGGGCATCTTTGGGTTGGGGACATAGCCGAAGTCTaGTGTTTGATGCCAACGGATCTGGGGAAATCCATC +
Preference number: 6 (lower is better)
Translates to: IGHLWVGDIAEV*CLMPTDLGKSI
Trigger: GATGGATTTCCCCAGATCCGTTGGCATCAAACAGCAGACTTCGGCTATGTCCCCAACCCAAAGATGCCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263593.8
ENST00000545756.5
ENST00000618733.4
CDS CAA 90 bp GTCAGGGACTGGGTGGAGACGGTGTTCATAGAAGCTGGAAGCCACTaGCATCGATGGTCACTGCAACAGGAGATCTCAAATATCTTGTTG +
Preference number: 6 (lower is better)
Translates to: VRDWVETVFIEAGSH*HRWSLQQEISNILL
Trigger: CAACAAGATATTTGAGATCTCCTGTTGCAGTGACCATCGATGCAAGTGGCTTCCAGCTTCTATGAACACCGTCTCCACCCAGTCCCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263593.8
ENST00000545756.5
ENST00000618733.4
CDS CAA 72 bp TGGGTGGAGACGGTGTTCATAGAAGCTGGAAGCCACTaGCATCGATGGTCACTGCAACAGGAGATCTCAAAT +
Preference number: 6 (lower is better)
Translates to: WVETVFIEAGSH*HRWSLQQEISN
Trigger: ATTTGAGATCTCCTGTTGCAGTGACCATCGATGCAAGTGGCTTCCAGCTTCTATGAACACCGTCTCCACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263593.8
ENST00000545756.5
ENST00000618733.4
CDS GCA 72 bp ACCACGGTGGAAGGTTTCACGCCAGTCTTCGATGAGTaGAGGGAATGTGCAATTGTACAGATCCGTGTTATA +
Preference number: 6 (lower is better)
Translates to: TTVEGFTPVFDE*RECAIVQIRVI
Trigger: TATAACACGGATCTGTACAATTGCACATTCCCTGCACTCATCGAAGACTGGCGTGAAACCTTCCACCGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263593.8
ENST00000545756.5
ENST00000618733.4
CDS CCA 72 bp GACCGTCTTCATTGTATTTCTCACGGACATACAGCGTaGAAGGTAACTTTAGTACCAGCTACTCAGGGGCTG +
Preference number: 6 (lower is better)
Translates to: DRLHCISHGHTA*KVTLVPATQGL
Trigger: CAGCCCCTGAGTAGCTGGTACTAAAGTTACCTTCCACGCTGTATGTCCGTGAGAAATACAATGAAGACGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618733.4
CDS CAA 90 bp CATATCACTGCCCCAGCAGGCTCCTTCTGCAGCACCATATCATTATaGATGTATGAAGCAAAGCGAAAACCAATACCTGCACTTCTGTCG +
Preference number: 6 (lower is better)
Translates to: HITAPAGSFCSTISL*MYEAKRKPIPALLS
Trigger: CGACAGAAGTGCAGGTATTGGTTTTCGCTTTGCTTCATACATCAATAATGATATGGTGCTGCAGAAGGAGCCTGCTGGGGCAGTGATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000436137.2
CDS CAA 90 bp GACGTCATGAACTCTCAGGGTGAAGTTTATTTTCTCCAAAGTCTGTaGTGCCATCACTTCGAAAGGTCCTCCAGGCTTCATAGGATCCAG +
Preference number: 6 (lower is better)
Translates to: DVMNSQGEVYFLQSL*CHHFERSSRLHRIQ
Trigger: CTGGATCCTATGAAGCCTGGAGGACCTTTCGAAGTGATGGCACAACAGACTTTGGAGAAAATAAACTTCACCCTGAGAGTTCATGACGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263593.8
ENST00000436137.2
ENST00000533613.1
ENST00000545756.5
ENST00000618733.4
CDS TCA 72 bp CCCCAGCAGGCTCCTTCTGCAGCACCATATCATTATTaGTGTATGAAGCAAAGCGAAAACCAATACCTGCAC +
Preference number: 6 (lower is better)
Translates to: PQQAPSAAPYHY*CMKQSENQYLH
Trigger: GTGCAGGTATTGGTTTTCGCTTTGCTTCATACATCAATAATGATATGGTGCTGCAGAAGGAGCCTGCTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000436137.2
CDS CCA 72 bp GATGGATCATGGCATTCCAGAGAACAGAGTGCTTACTaGGACCAGTTACAGAATCGTATGGAATGGACCCTT +
Preference number: 6 (lower is better)
Translates to: DGSWHSREQSAY*DQLQNRMEWTL
Trigger: AAGGGTCCATTCCATACGATTCTGTAACTGGTCCCAGTAAGCACTCTGTTCTCTGGAATGCCATGATCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263593.8
ENST00000545756.5
ENST00000618733.4
CDS CCA 72 bp ATCCATAGCTACAGCCATGAAAGTATTGGGCATCTTTaGGTTGGGGACATAGCCGAAGTCTGCTGTTTGATG +
Preference number: 6 (lower is better)
Translates to: IHSYSHESIGHL*VGDIAEVCCLM
Trigger: CATCAAACAGCAGACTTCGGCTATGTCCCCAACCCAAAGATGCCCAATACTTTCATGGCTGTAGCTATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263593.8
ENST00000545756.5
ENST00000618733.4
CDS CCA 72 bp CCCCTTGTGAGCCAAGAGTTCTATCTTCTCAGGCAGTaGTCCTTCAAAGGTCAAATTCTTCTCACCATAAGC +
Preference number: 6 (lower is better)
Translates to: PLVSQEFYLLRQ*SFKGQILLTIS
Trigger: GCTTATGGTGAGAAGAATTTGACCTTTGAAGGACCACTGCCTGAGAAGATAGAACTCTTGGCTCACAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263593.8
ENST00000545756.5
ENST00000618733.4
CDS CAA 72 bp GCCCCAGCAGGCTCCTTCTGCAGCACCATATCATTATaGATGTATGAAGCAAAGCGAAAACCAATACCTGCA +
Preference number: 6 (lower is better)
Translates to: APAGSFCSTISL*MYEAKRKPIPA
Trigger: TGCAGGTATTGGTTTTCGCTTTGCTTCATACATCAATAATGATATGGTGCTGCAGAAGGAGCCTGCTGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263593.8
ENST00000436137.2
CDS CCA 72 bp CATACTACCCCTTTCAGAGTCATATTGCACAGTGGATaGATCATGGCATTCCAGAGAACAGAGTGCTTACTG +
Preference number: 6 (lower is better)
Translates to: HTTPFRVILHSG*IMAFQRTECLL
Trigger: CAGTAAGCACTCTGTTCTCTGGAATGCCATGATCCATCCACTGTGCAATATGACTCTGAAAGGGGTAGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263593.8
ENST00000545756.5
ENST00000618733.4
CDS CCA 72 bp GTACCATACTACCCCTTTCAGAGTCATATTGCACAGTaGATGGATCATGGCATTCCAGAGAACAGAGTGCTT +
Preference number: 6 (lower is better)
Translates to: VPYYPFQSHIAQ*MDHGIPENRVL
Trigger: AAGCACTCTGTTCTCTGGAATGCCATGATCCATCCACTGTGCAATATGACTCTGAAAGGGGTAGTATGGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263593.8
ENST00000545756.5
ENST00000618733.4
CDS CCA 72 bp ACGGTGTTCATAGAAGCTGGAAGCCACTTGCATCGATaGTCACTGCAACAGGAGATCTCAAATATCTTGTTG +
Preference number: 6 (lower is better)
Translates to: TVFIEAGSHLHR*SLQQEISNILL
Trigger: CAACAAGATATTTGAGATCTCCTGTTGCAGTGACCATCGATGCAAGTGGCTTCCAGCTTCTATGAACACCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263593.8
ENST00000545756.5
ENST00000618733.4
CDS CAA 72 bp GCCCCAGCAGGCTCCTTCTGCAGCACCATATCATTATaGATGTATGAAGCAAAGCGAAAACCAATACCAAGA +
Preference number: 6 (lower is better)
Translates to: APAGSFCSTISL*MYEAKRKPIPR
Trigger: TCTTGGTATTGGTTTTCGCTTTGCTTCATACATCAATAATGATATGGTGCTGCAGAAGGAGCCTGCTGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525730.1
ENST00000545756.5
ENST00000618733.4
CDS CAA 90 bp CATATCACTGCCCCAGCAGGCTCCTTCTGCAGCACCATATCATTATaGATGTATGAAGCAAAGCGAAAACCAATACCAAGAAGATGTCGA +
Preference number: 6 (lower is better)
Translates to: HITAPAGSFCSTISL*MYEAKRKPIPRRCR
Trigger: TCGACATCTTCTTGGTATTGGTTTTCGCTTTGCTTCATACATCAATAATGATATGGTGCTGCAGAAGGAGCCTGCTGGGGCAGTGATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525730.1
ENST00000545756.5
ENST00000618733.4
CDS TCA 72 bp CCCCAGCAGGCTCCTTCTGCAGCACCATATCATTATTaGTGTATGAAGCAAAGCGAAAACCAATACCAAGAA +
Preference number: 6 (lower is better)
Translates to: PQQAPSAAPYHY*CMKQSENQYQE
Trigger: TTCTTGGTATTGGTTTTCGCTTTGCTTCATACATCAATAATGATATGGTGCTGCAGAAGGAGCCTGCTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525730.1
ENST00000545756.5
ENST00000618733.4
CDS CAA 72 bp AACTCTCAGGGTGAAGTTTATTTTCTCCAAAGTCTGTaGTGCCATCACTTCGAAAGGTCCTCCAGGCTTCAT +
Preference number: 6 (lower is better)
Translates to: NSQGEVYFLQSL*CHHFERSSRLH
Trigger: ATGAAGCCTGGAGGACCTTTCGAAGTGATGGCACAACAGACTTTGGAGAAAATAAACTTCACCCTGAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263593.8
ENST00000436137.2
ENST00000533613.1
ENST00000545756.5
ENST00000618733.4
CDS CAA 72 bp GCCCCAGCAGGCTCCTTCTGCAGCACCATATCATTATaGATGTATGAAGCAAAGCGAAAACCAATACCTAAA +
Preference number: 6 (lower is better)
Translates to: APAGSFCSTISL*MYEAKRKPIPK
Trigger: TTTAGGTATTGGTTTTCGCTTTGCTTCATACATCAATAATGATATGGTGCTGCAGAAGGAGCCTGCTGGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533613.1
CDS TCA 72 bp GAAAATGGGATGGAATCCCCTGGCATAGACTGCTGTTaGGAAAGCGACTATATAGATACAAACAGATCTGGT +
Preference number: 6 (lower is better)
Translates to: ENGMESPGIDCC*ESDYIDTNRSG
Trigger: ACCAGATCTGTTTGTATCTATATAGTCGCTTTCTCAACAGCAGTCTATGCCAGGGGATTCCATCCCATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436137.2
CDS TCA 72 bp CCCCAGCAGGCTCCTTCTGCAGCACCATATCATTATTaGTGTATGAAGCAAAGCGAAAACCAATACCTAAAA +
Preference number: 6 (lower is better)
Translates to: PQQAPSAAPYHY*CMKQSENQYLK
Trigger: TTTTAGGTATTGGTTTTCGCTTTGCTTCATACATCAATAATGATATGGTGCTGCAGAAGGAGCCTGCTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533613.1
CDS CCA 72 bp CTGTTGAGAAAGCGACTATATAGATACAAACAGATCTaGTCCATGCCTTTCTGTGCAAACAGGGAACTGCAA +
Preference number: 6 (lower is better)
Translates to: LLRKRLYRYKQI*SMPFCANRELQ
Trigger: TTGCAGTTCCCTGTTTGCACAGAAAGGCATGGACCAGATCTGTTTGTATCTATATAGTCGCTTTCTCAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436137.2
CDS CAA 72 bp TCGAAGATTACCAGTTCATTATTCAGACCGTCTTCATaGTATTTCTCACGGACATACAGCGTGGAAGGTAAC +
Preference number: 6 (lower is better)
Translates to: SKITSSLFRPSS*YFSRTYSVEGN
Trigger: GTTACCTTCCACGCTGTATGTCCGTGAGAAATACAATGAAGACGGTCTGAATAATGAACTGGTAATCTTCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545756.5
ENST00000618733.4
CDS CAA 90 bp TTCATATTATCGAAGATTACCAGTTCATTATTCAGACCGTCTTCATaGTATTTCTCACGGACATACAGCGTGGAAGGTAACTTTAGTACC +
Preference number: 6 (lower is better)
Translates to: FILSKITSSLFRPSS*YFSRTYSVEGNFST
Trigger: GGTACTAAAGTTACCTTCCACGCTGTATGTCCGTGAGAAATACAATGAAGACGGTCTGAATAATGAACTGGTAATCTTCGATAATATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618733.4
CDS CCA 72 bp AATTCATTCAAAGCATTTAGAACATATCTTGGCTCATaGTACTCACTAAATAGAAACAGCCCTGCTTCTCCT +
Preference number: 6 (lower is better)
Translates to: NSFKAFRTYLGS*YSLNRNSPASP
Trigger: AGGAGAAGCAGGGCTGTTTCTATTTAGTGAGTACCATGAGCCAAGATATGTTCTAAATGCTTTGAATGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436137.2