RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SHTN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000187164

Ensembl transcript IDs: ENST00000260777.14, ENST00000355371.9, ENST00000392901.10, ENST00000392903.3, ENST00000490615.1, ENST00000497044.5, ENST00000615301.4

Found 717 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCCACACAAGGTGTAGAGGAATCAGCCGAAACAGGAGCATCCTCTaGATAGGGCTGTACACACCCCAGGTTCCAGCCACACCATCAGTA +
Preference number: 1 (lower is better)
Translates to: PHTRCRGISRNRSIL*IGLYTPQVPATPSV
Trigger: TACTGATGGTGTGGCTGGAACCTGGGGTGTGTACAGCCCTATCCAGAGGATGCTCCTGTTTCGGCTGATTCCTCTACACCTTGTGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR TCA 90 bp CCCCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTaGAGTACGGCGCCGTGTCTCCACATGGAGTTTCCTCTTCAACTT +
Preference number: 1 (lower is better)
Translates to: PQVPATPSVLVDREV*STAPCLHMEFPLQL
Trigger: AAGTTGAAGAGGAAACTCCATGTGGAGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR GCA 90 bp TACTCAGGGCAAACTATGCTGGGTGCTAATAGCCCTGTTGATGCCTaGCAGTCAGAACTTCCATGGGACTGTTCAGCTGCTGAAACTGCT +
Preference number: 1 (lower is better)
Translates to: YSGQTMLGANSPVDA*QSELPWDCSAAETA
Trigger: AGCAGTTTCAGCAGCTGAACAGTCCCATGGAAGTTCTGACTGGCAGGCATCAACAGGGCTATTAGCACCCAGCATAGTTTGCCCTGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR GCA 90 bp GTAGTTAGAGCCAAAGCATCCATCCTCCGTACTCAGGGCAAACTATaGTGGGTGCTAATAGCCCTGTTGATGCCTGCCAGTCAGAACTTC +
Preference number: 1 (lower is better)
Translates to: VVRAKASILRTQGKL*WVLIALLMPASQNF
Trigger: GAAGTTCTGACTGGCAGGCATCAACAGGGCTATTAGCACCCAGCATAGTTTGCCCTGAGTACGGAGGATGGATGCTTTGGCTCTAACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR CCA 90 bp GCCAGTCAGAACTTCCATGGGACTGTTCAGCTGCTGAAACTGCTGTaGGTGAGGACTTTGTTTGAGACCAGCTCACATACAAAAGGGTGC +
Preference number: 1 (lower is better)
Translates to: ASQNFHGTVQLLKLL*VRTLFETSSHTKGC
Trigger: GCACCCTTTTGTATGTGAGCTGGTCTCAAACAAAGTCCTCACCCACAGCAGTTTCAGCAGCTGAACAGTCCCATGGAAGTTCTGACTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR CCA 90 bp GTTAGAGCCAAAGCATCCATCCTCCGTACTCAGGGCAAACTATGCTaGGTGCTAATAGCCCTGTTGATGCCTGCCAGTCAGAACTTCCAT +
Preference number: 1 (lower is better)
Translates to: VRAKASILRTQGKLC*VLIALLMPASQNFH
Trigger: ATGGAAGTTCTGACTGGCAGGCATCAACAGGGCTATTAGCACCCAGCATAGTTTGCCCTGAGTACGGAGGATGGATGCTTTGGCTCTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR CCA 90 bp ACTGGCTCAGGCGCAGACTCTCTCAGAGCATGCAGGAGACTTGGTTaGTATCACTCTAAGTTGGAAGAACTGTGTCACAGTTTGTGGCTG +
Preference number: 1 (lower is better)
Translates to: TGSGADSLRACRRLG*YHSKLEELCHSLWL
Trigger: CAGCCACAAACTGTGACACAGTTCTTCCAACTTAGAGTGATACCAACCAAGTCTCCTGCATGCTCTGAGAGAGTCTGCGCCTGAGCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR CCA 90 bp CTTGGTTGGTATCACTCTAAGTTGGAAGAACTGTGTCACAGTTTGTaGCTGCTACTGCCTCTCCTGATGCTTAGCAACAAGCAACGGGTA +
Preference number: 1 (lower is better)
Translates to: LGWYHSKLEELCHSL*LLLPLLMLSNKQRV
Trigger: TACCCGTTGCTTGTTGCTAAGCATCAGGAGAGGCAGTAGCAGCCACAAACTGTGACACAGTTCTTCCAACTTAGAGTGATACCAACCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR TCA 90 bp CCACACTCAGTCAAACACCCCATCCTTTACCAATCAGAATATCTCTaGGAACAAAAACCTAATGACCCTAGAAGCTCTCTGTGCTGGGAA +
Preference number: 1 (lower is better)
Translates to: PHSVKHPILYQSEYL*EQKPNDPRSSLCWE
Trigger: TTCCCAGCACAGAGAGCTTCTAGGGTCATTAGGTTTTTGTTCTCAGAGATATTCTGATTGGTAAAGGATGGGGTGTTTGACTGAGTGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR CCA 90 bp TATTCAGGCTACCAGAGCATCCCCACGGAGGTCCTCGGGAGGCTTTaGACACAATCAATAGCATGTATTTTTCATCCAATAGTTAACAAT +
Preference number: 1 (lower is better)
Translates to: YSGYQSIPTEVLGRL*TQSIACIFHPIVNN
Trigger: ATTGTTAACTATTGGATGAAAAATACATGCTATTGATTGTGTCCAAAGCCTCCCGAGGACCTCCGTGGGGATGCTCTGGTAGCCTGAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR CCA 90 bp GTGCTTATTGAAAAGGACTTCCAAACATGTCAGGCTTCTGGTTTATaGATCAGCAGTTGGAGCTGTCTGTCTCTCTCACGTTTTCAATGC +
Preference number: 1 (lower is better)
Translates to: VLIEKDFQTCQASGL*ISSWSCLSLSRFQC
Trigger: GCATTGAAAACGTGAGAGAGACAGACAGCTCCAACTGCTGATCCATAAACCAGAAGCCTGACATGTTTGGAAGTCCTTTTCAATAAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615301.4
3UTR CCA 90 bp ACAGAGCACATGGTTTACCAACTTACTACTGTAAAATTCAAGGTTTaGACTTTCACCTCAGTTCTGTATTCAGGCTACCAGAGCATCCCC +
Preference number: 1 (lower is better)
Translates to: TEHMVYQLTTVKFKV*TFTSVLYSGYQSIP
Trigger: GGGGATGCTCTGGTAGCCTGAATACAGAACTGAGGTGAAAGTCCAAACCTTGAATTTTACAGTAGTAAGTTGGTAAACCATGTGCTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR TCA 90 bp TTCAAACCACTCCAATCCTTATGCAGGGACTGCTTGATGAGTCTTTaGAGGTCAGTGATAATGACAGATGGTTATCCATTCTCGACAACT +
Preference number: 1 (lower is better)
Translates to: FKPLQSLCRDCLMSL*RSVIMTDGYPFSTT
Trigger: AGTTGTCGAGAATGGATAACCATCTGTCATTATCACTGACCTTCAAAGACTCATCAAGCAGTCCCTGCATAAGGATTGGAGTGGTTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR GCA 90 bp AGGACGTATGTAAGTTTTGTGTGTGCAATAGCTATGAACATACCTTaGAGATATAAGCACGGTTCTCCTATGTCTTCCTATTTGGGATCC +
Preference number: 1 (lower is better)
Translates to: RTYVSFVCAIAMNIP*RYKHGSPMSSYLGS
Trigger: GGATCCCAAATAGGAAGACATAGGAGAACCGTGCTTATATCTGCAAGGTATGTTCATAGCTATTGCACACACAAAACTTACATACGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR GCA 90 bp AGCAGAATGTCTACAGCCCTTGCCAATATAACAACACTAATCATGTaGTTATTGAAAAGGACTTCCAAACATGTCAGGCTTCTGGTTTAT +
Preference number: 1 (lower is better)
Translates to: SRMSTALANITTLIM*LLKRTSKHVRLLVY
Trigger: ATAAACCAGAAGCCTGACATGTTTGGAAGTCCTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATTCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR TCA 90 bp TTTGCTAAACAGCTTACTTATGTTTATAGTTGCTACTTACAAAAGTaGCACCAGAAAAGAACCTGTATTCTGAATACAGTGACCAGAGCA +
Preference number: 1 (lower is better)
Translates to: FAKQLTYVYSCYLQK*HQKRTCILNTVTRA
Trigger: TGCTCTGGTCACTGTATTCAGAATACAGGTTCTTTTCTGGTGTCACTTTTGTAAGTAGCAACTATAAACATAAGTAAGCTGTTTAGCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR GCA 90 bp AGCCGAAACAGGAGCATCCTCTGGATAGGGCTGTACACACCCCAGGTTCCAGCCCCACTCCAATCCTTATaGAGGGACTGCTTGATGAGT +
Preference number: 2 (lower is better)
Translates to: SRNRSILWIGLYTPQVPAPLQSL*RDCLMS
Trigger: ACTCATCAAGCAGTCCCTGCATAAGGATTGGAGTGG...GGCTGGAACCTGGGGTGTGTACAGCCCTATCCAGAGGATGCTCCTGTTTCGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR CAA 90 bp ATCCTCCGTACTCAGGGCAAACTATGCTGGGTGCTAATAGCCCTGTaGATGCCTGCCAGTCAGAACTTCCATGGGACTGTTCAGCTGCTG +
Preference number: 2 (lower is better)
Translates to: ILRTQGKLCWVLIAL*MPASQNFHGTVQLL
Trigger: CAGCAGCTGAACAGTCCCATGGAAGTTCTGACTGGCAGGCATCAACAGGGCTATTAGCACCCAGCATAGTTTGCCCTGAGTACGGAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR GCA 90 bp AGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTCCTAGAAGCTCTCTGTaGTGGGAACAGATGTCCATC +
Preference number: 2 (lower is better)
Translates to: SHTISISRPGGLKYGAVSPRSSL*WEQMSI
Trigger: GATGGACATCTGTTCCCAGCACAGAGAGCTTCTAGG...AGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CCA 90 bp AGCCGAAACAGGAGCATCCTCTGGATAGGGCTGTACACACCCCAGGTTCCAGCCAACATGTCAGGCTTCTaGTTTATGGATCAGCAGTTG +
Preference number: 2 (lower is better)
Translates to: SRNRSILWIGLYTPQVPANMSGF*FMDQQL
Trigger: CAACTGCTGATCCATAAACCAGAAGCCTGACATGTT...GGCTGGAACCTGGGGTGTGTACAGCCCTATCCAGAGGATGCTCCTGTTTCGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615301.4
3UTR-3UTR GCA 90 bp AGCCGAAACAGGAGCATCCTCTGGATAGGGCTGTACACACCCCAGGTTCCAGCCATCCATTGCCTGAATTaGTCTTTTGTAAGCCAGTGT +
Preference number: 2 (lower is better)
Translates to: SRNRSILWIGLYTPQVPAIHCLN*SFVSQC
Trigger: ACACTGGCTTACAAAAGAGCAATTCAGGCAATGGAT...GGCTGGAACCTGGGGTGTGTACAGCCCTATCCAGAGGATGCTCCTGTTTCGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CCA 90 bp CTGTGGGTGAGGACTTTGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCTGGGATCCCTTGCTTTaGTTGACAGTGTCACCCCAG +
Preference number: 2 (lower is better)
Translates to: LWVRTLFETSSHTKGCKCWDPLL*LTVSPQ
Trigger: CTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCA...GCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACAAAGTCCTCACCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR CAA 90 bp GACTCTCTCAGAGCATGCAGGAGACTTGGTTGGTATCACTCTAAGTaGGAAGAACTGTGTCACAGTTTGTGGCTGCTACTGCCTCTCCTG +
Preference number: 2 (lower is better)
Translates to: DSLRACRRLGWYHSK*EELCHSLWLLLPLL
Trigger: CAGGAGAGGCAGTAGCAGCCACAAACTGTGACACAGTTCTTCCAACTTAGAGTGATACCAACCAAGTCTCCTGCATGCTCTGAGAGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR TCA 90 bp TCCTATTTGGGATCCCTTGCTTTGGTTGACAGTGTCACCCCAGCCAGGGGCAAATCTTTTGCCCTTAGGTaGAAAACACCTGACAGCTAC +
Preference number: 2 (lower is better)
Translates to: SYLGSLALVDSVTPARGKSFALR*KTPDSY
Trigger: GTAGCTGTCAGGTGTTTTTCACCTAAGGGCAAAAGA...TTTGCCCCTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR TCA 90 bp AGCCGAAACAGGAGCATCCTCTGGATAGGGCTGTACACACCCCAGGTTCCAGCCTGTTCACATACCCTTTaGAAAATACACACACACACA +
Preference number: 2 (lower is better)
Translates to: SRNRSILWIGLYTPQVPACSHTL*KIHTHT
Trigger: TGTGTGTGTGTGTATTTTTCAAAGGGTATGTGAACA...GGCTGGAACCTGGGGTGTGTACAGCCCTATCCAGAGGATGCTCCTGTTTCGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR GCA 90 bp AGCCGAAACAGGAGCATCCTCTGGATAGGGCTGTACACACCCCAGGTTCCAGCCCTCTCACGTTTTCAATaGTGTCTTCTTTGTTTTCTG +
Preference number: 2 (lower is better)
Translates to: SRNRSILWIGLYTPQVPALSRFQ*CLLCFL
Trigger: CAGAAAACAAAGAAGACAGCATTGAAAACGTGAGAG...GGCTGGAACCTGGGGTGTGTACAGCCCTATCCAGAGGATGCTCCTGTTTCGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000615301.4
3UTR-3UTR CCA 90 bp AGCCAAAGCATCCATCCTCCGTACTCAGGGCAAACTATGCTGGGTGCTAATAGCGTCCTCGGGAGGCTTTaGACACAATCAATAGCATGT +
Preference number: 2 (lower is better)
Translates to: SQSIHPPYSGQTMLGANSVLGRL*TQSIAC
Trigger: ACATGCTATTGATTGTGTCCAAAGCCTCCCGAGGAC...GCTATTAGCACCCAGCATAGTTTGCCCTGAGTACGGAGGATGGATGCTTTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CCA 90 bp AGCCAAAGCATCCATCCTCCGTACTCAGGGCAAACTATGCTGGGTGCTAATAGCCTGCTGAAACTGCTGTaGGTGAGGACTTTGTTTGAG +
Preference number: 2 (lower is better)
Translates to: SQSIHPPYSGQTMLGANSLLKLL*VRTLFE
Trigger: CTCAAACAAAGTCCTCACCCACAGCAGTTTCAGCAG...GCTATTAGCACCCAGCATAGTTTGCCCTGAGTACGGAGGATGGATGCTTTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR TCA 90 bp AGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTTGCTTGATGAGTCTTTaGAGGTCAGTGATAATGACA +
Preference number: 2 (lower is better)
Translates to: SHTISISRPGGLKYGAVSCLMSL*RSVIMT
Trigger: TGTCATTATCACTGACCTTCAAAGACTCATCAAGCA...AGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR GCA 90 bp ATGTCTTCCTATTTGGGATCCCTTGCTTTGGTTGACAGTGTCACCCCAGCCAGGCAATTTCCATGCTGCTaGAGTTTCTCCATCAAGAGG +
Preference number: 2 (lower is better)
Translates to: MSSYLGSLALVDSVTPARQFPCC*SFSIKR
Trigger: CCTCTTGATGGAGAAACTGCAGCAGCATGGAAATTG...CCTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGAAGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR CAA 90 bp AGACTTGGTTGGTATCACTCTAAGTTGGAAGAACTGTGTCACAGTTaGTGGCTGCTACTGCCTCTCCTGATGCTTAGCAACAAGCAACGG +
Preference number: 2 (lower is better)
Translates to: RLGWYHSKLEELCHS*WLLLPLLMLSNKQR
Trigger: CCGTTGCTTGTTGCTAAGCATCAGGAGAGGCAGTAGCAGCCACAAACTGTGACACAGTTCTTCCAACTTAGAGTGATACCAACCAAGTCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR CAA 90 bp TTGAAACTGGCTCAGGCGCAGACTCTCTCAGAGCATGCAGGAGACTaGGTTGGTATCACTCTAAGTTGGAAGAACTGTGTCACAGTTTGT +
Preference number: 2 (lower is better)
Translates to: LKLAQAQTLSEHAGD*VGITLSWKNCVTVC
Trigger: ACAAACTGTGACACAGTTCTTCCAACTTAGAGTGATACCAACCAAGTCTCCTGCATGCTCTGAGAGAGTCTGCGCCTGAGCCAGTTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR TCA 90 bp ACTCAGGGCAAACTATGCTGGGTGCTAATAGCCCTGTTGATGCCTGCCAGTCAGTGCTACTTACAAAAGTaGCACCAGAAAAGAACCTGT +
Preference number: 2 (lower is better)
Translates to: TQGKLCWVLIALLMPASQCYLQK*HQKRTC
Trigger: ACAGGTTCTTTTCTGGTGTCACTTTTGTAAGTAGCA...CTGACTGGCAGGCATCAACAGGGCTATTAGCACCCAGCATAGTTTGCCCTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR TCA 90 bp AGCCAAAGCATCCATCCTCCGTACTCAGGGCAAACTATGCTGGGTGCTAATAGCTCATCCTCCTTGTGTTaGGTTGGATCTTTTTCAGCA +
Preference number: 2 (lower is better)
Translates to: SQSIHPPYSGQTMLGANSSSSLC*VGSFSA
Trigger: TGCTGAAAAAGATCCAACTCAACACAAGGAGGATGA...GCTATTAGCACCCAGCATAGTTTGCCCTGAGTACGGAGGATGGATGCTTTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615301.4
3UTR-3UTR TCA 90 bp TCCTATTTGGGATCCCTTGCTTTGGTTGACAGTGTCACCCCAGCCAGGGGCAAATTCACTGTGGTAGCCTaGAACATTGTATTTTTAGAG +
Preference number: 2 (lower is better)
Translates to: SYLGSLALVDSVTPARGKFTVVA*NIVFLE
Trigger: CTCTAAAAATACAATGTTTCAGGCTACCACAGTGAA...TTTGCCCCTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR TCA 90 bp TATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCTTTACCAATCAGACCAGGTCAGCAGTGTaGCTTCAACACAGAGCAGTT +
Preference number: 2 (lower is better)
Translates to: YFCCQLHTQSNTPSFTNQTRSAV*LQHRAV
Trigger: AACTGCTCTGTGTTGAAGTCACACTGCTGACCTGGT...CTGATTGGTAAAGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR TCA 90 bp CCAATATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCTTTACCAACACACACACACATCATaGGACTATGCCCTGGAACAG +
Preference number: 2 (lower is better)
Translates to: PIFLLPTPHSVKHPILYQHTHTS*DYALEQ
Trigger: CTGTTCCAGGGCATAGTCTCATGATGTGTGTGTGTG...TTGGTAAAGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATATTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CCA 90 bp TTAATAGCAATGGCACAAAGTACCTCTATCTCTGTTCCTCACTCGGGCTATAAATGGGATCCCTTGCTTTaGTTGACAGTGTCACCCCAG +
Preference number: 2 (lower is better)
Translates to: LIAMAQSTSISVPHSGYKWDPLL*LTVSPQ
Trigger: CTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCA...TTTATAGCCCGAGTGAGGAACAGAGATAGAGGTACTTTGTGCCATTGCTATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CCA 90 bp CAGCCACCACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGTCCATTAGAAGCTCTCTGTGCTaGGAACAGATGTCCATCTTC +
Preference number: 2 (lower is better)
Translates to: QPPHFHVDFVCLLALLSIRSSLC*EQMSIF
Trigger: GAAGATGGACATCTGTTCCCAGCACAGAGAGCTTCT...AATGGACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGGTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR CAA 90 bp AATTTCCTCATAACAGAGCCAACTCTTTATTCTCAAAGCTATGATTaGAAACTGGCTCAGGCGCAGACTCTCTCAGAGCATGCAGGAGAC +
Preference number: 2 (lower is better)
Translates to: NFLITEPTLYSQSYD*KLAQAQTLSEHAGD
Trigger: GTCTCCTGCATGCTCTGAGAGAGTCTGCGCCTGAGCCAGTTTCAAATCATAGCTTTGAGAATAAAGAGTTGGCTCTGTTATGAGGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR TCA 90 bp TTCTTTAATAGCAATGGCACAAAGTACCTCTATCTCTGTTCCTCACTCGGGCTAATGGGACTACGAGTTTaGTGCCAGCTCCTGAGTTTT +
Preference number: 2 (lower is better)
Translates to: FFNSNGTKYLYLCSSLGLMGLRV*CQLLSF
Trigger: AAAACTCAGGAGCTGGCATCAAACTCGTAGTCCCAT...TAGCCCGAGTGAGGAACAGAGATAGAGGTACTTTGTGCCATTGCTATTAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR GCA 90 bp AGCCAAAGCATCCATCCTCCGTACTCAGGGCAAACTATGCTGGGTGCTAATAGCAATGTCTACAGCCCTTaGCAATATAACAACACTAAT +
Preference number: 2 (lower is better)
Translates to: SQSIHPPYSGQTMLGANSNVYSP*QYNNTN
Trigger: ATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT...GCTATTAGCACCCAGCATAGTTTGCCCTGAGTACGGAGGATGGATGCTTTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR GCA 90 bp CAGCCACCACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGTCCATTCAATTTCCATGCTGCTaGAGTTTCTCCATCAAGAGG +
Preference number: 2 (lower is better)
Translates to: QPPHFHVDFVCLLALLSIQFPCC*SFSIKR
Trigger: CCTCTTGATGGAGAAACTGCAGCAGCATGGAAATTG...AATGGACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGGTGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR GCA 90 bp ATGTCTTCCTATTTGGGATCCCTTGCTTTGGTTGACAGTGTCACCCCAGCCAGGTGTAAGTTTTGTGTGTaGAATAGCTATGAACATACC +
Preference number: 2 (lower is better)
Translates to: MSSYLGSLALVDSVTPARCKFCV*NSYEHT
Trigger: GGTATGTTCATAGCTATTGCACACACAAAACTTACA...CCTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGAAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CCA 90 bp CTGTGGGTGAGGACTTTGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCGTAAAATTCAAGGTTTaGACTTTCACCTCAGTTCTG +
Preference number: 2 (lower is better)
Translates to: LWVRTLFETSSHTKGCKCVKFKV*TFTSVL
Trigger: CAGAACTGAGGTGAAAGTCCAAACCTTGAATTTTAC...GCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACAAAGTCCTCACCCACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CCA 90 bp TATTACAATAACCAGGTCAGCAGTGTGACTTCAACACAGAGCAGTTTACTCACCCTGCTGAAACTGCTGTaGGTGAGGACTTTGTTTGAG +
Preference number: 2 (lower is better)
Translates to: YYNNQVSSVTSTQSSLLTLLKLL*VRTLFE
Trigger: CTCAAACAAAGTCCTCACCCACAGCAGTTTCAGCAG...GGTGAGTAAACTGCTCTGTGTTGAAGTCACACTGCTGACCTGGTTATTGTAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CCA 90 bp TACAATAACCAGGTCAGCAGTGTGACTTCAACACAGAGCAGTTTACTCACCTATCAGTCAGAACTTCCATaGGACTGTTCAGCTGCTGAA +
Preference number: 2 (lower is better)
Translates to: YNNQVSSVTSTQSSLLTYQSELP*DCSAAE
Trigger: TTCAGCAGCTGAACAGTCCCATGGAAGTTCTGACTG...ATAGGTGAGTAAACTGCTCTGTGTTGAAGTCACACTGCTGACCTGGTTATTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CCA 90 bp CAGCCACCACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGTCCATTTTATGGATCAGCAGTTaGAGCTGTCTGTCTCTCTCA +
Preference number: 2 (lower is better)
Translates to: QPPHFHVDFVCLLALLSILWISS*SCLSLS
Trigger: TGAGAGAGACAGACAGCTCCAACTGCTGATCCATAA...AATGGACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGGTGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615301.4
3UTR CAA 90 bp CACAGAGCACATGGTTTACCAACTTACTACTGTAAAATTCAAGGTTaGGACTTTCACCTCAGTTCTGTATTCAGGCTACCAGAGCATCCC +
Preference number: 2 (lower is better)
Translates to: HRAHGLPTYYCKIQG*DFHLSSVFRLPEHP
Trigger: GGGATGCTCTGGTAGCCTGAATACAGAACTGAGGTGAAAGTCCAAACCTTGAATTTTACAGTAGTAAGTTGGTAAACCATGTGCTCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR CAA 90 bp CTTCAAACCACTCCAATCCTTATGCAGGGACTGCTTGATGAGTCTTaGAAGGTCAGTGATAATGACAGATGGTTATCCATTCTCGACAAC +
Preference number: 2 (lower is better)
Translates to: LQTTPILMQGLLDES*KVSDNDRWLSILDN
Trigger: GTTGTCGAGAATGGATAACCATCTGTCATTATCACTGACCTTCAAAGACTCATCAAGCAGTCCCTGCATAAGGATTGGAGTGGTTTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR TCA 90 bp AATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTTTGTTTGTATGGGACTACGAGTTTaGTGCCAGCTCCTGAGTTTT +
Preference number: 2 (lower is better)
Translates to: NSVNFVLQPPHFHVDFVCMGLRV*CQLLSF
Trigger: AAAACTCAGGAGCTGGCATCAAACTCGTAGTCCCAT...ACAAACAAAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR TCA 90 bp TATTACAATAACCAGGTCAGCAGTGTGACTTCAACACAGAGCAGTTTACTCACCATTCCTAAATGTGTGTaGGTTGCATGCTGGCAGACA +
Preference number: 2 (lower is better)
Translates to: YYNNQVSSVTSTQSSLLTIPKCV*VACWQT
Trigger: TGTCTGCCAGCATGCAACTCACACACATTTAGGAAT...GGTGAGTAAACTGCTCTGTGTTGAAGTCACACTGCTGACCTGGTTATTGTAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR TCA 90 bp TATTACAATAACCAGGTCAGCAGTGTGACTTCAACACAGAGCAGTTTACTCACCGGTGAGGACTTTGTTTaGGACCAGCTCACATACAAA +
Preference number: 2 (lower is better)
Translates to: YYNNQVSSVTSTQSSLLTGEDFV*DQLTYK
Trigger: TTTGTATGTGAGCTGGTCTCAAACAAAGTCCTCACC...GGTGAGTAAACTGCTCTGTGTTGAAGTCACACTGCTGACCTGGTTATTGTAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR TCA 90 bp CCAATATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCTTTACCAAGGTGAGGACTTTGTTTaGGACCAGCTCACATACAAA +
Preference number: 2 (lower is better)
Translates to: PIFLLPTPHSVKHPILYQGEDFV*DQLTYK
Trigger: TTTGTATGTGAGCTGGTCTCAAACAAAGTCCTCACC...TTGGTAAAGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATATTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR GCA 90 bp TACAATAACCAGGTCAGCAGTGTGACTTCAACACAGAGCAGTTTACTCACCTATCAATTTCCATGCTGCTaGAGTTTCTCCATCAAGAGG +
Preference number: 2 (lower is better)
Translates to: YNNQVSSVTSTQSSLLTYQFPCC*SFSIKR
Trigger: CCTCTTGATGGAGAAACTGCAGCAGCATGGAAATTG...ATAGGTGAGTAAACTGCTCTGTGTTGAAGTCACACTGCTGACCTGGTTATTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR GCA 90 bp CTGTGGGTGAGGACTTTGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCTGTAAGTTTTGTGTGTaGAATAGCTATGAACATACC +
Preference number: 2 (lower is better)
Translates to: LWVRTLFETSSHTKGCKCCKFCV*NSYEHT
Trigger: GGTATGTTCATAGCTATTGCACACACAAAACTTACA...GCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACAAAGTCCTCACCCACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CCA 90 bp CAGCCACCACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGTCCATTCTATGTCTTCCTATTTaGGATCCCTTGCTTTGGTTG +
Preference number: 2 (lower is better)
Translates to: QPPHFHVDFVCLLALLSILCLPI*DPLLWL
Trigger: CAACCAAAGCAAGGGATCCCAAATAGGAAGACATAG...AATGGACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGGTGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR TCA 90 bp GTACCTCTATCTCTGTTCCTCACTCGGGCTATAAAATGCATCAACATTCGTTTTCTGACAGCTACATGCTaGGCCATGCTAACAAAACTA +
Preference number: 2 (lower is better)
Translates to: VPLSLFLTRAIKCINIRFLTATC*AMLTKL
Trigger: TAGTTTTGTTAGCATGGCTCAGCATGTAGCTGTCAG...AAAACGAATGTTGATGCATTTTATAGCCCGAGTGAGGAACAGAGATAGAGGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR TCA 90 bp AATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTTTGTTTGTCTGACAGCTACATGCTaGGCCATGCTAACAAAACTA +
Preference number: 2 (lower is better)
Translates to: NSVNFVLQPPHFHVDFVCLTATC*AMLTKL
Trigger: TAGTTTTGTTAGCATGGCTCAGCATGTAGCTGTCAG...ACAAACAAAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR TCA 90 bp CAGCCACCACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGTCCATTTCTACATGTCTGTGCTaGAAAGCACTGACACATTTT +
Preference number: 2 (lower is better)
Translates to: QPPHFHVDFVCLLALLSISTCLC*KALTHF
Trigger: AAAATGTGTCAGTGCTTTTCAGCACAGACATGTAGA...AATGGACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGGTGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR GCA 90 bp TATTACAATAACCAGGTCAGCAGTGTGACTTCAACACAGAGCAGTTTACTCACCACCTATCCTCGAGACTaGACTCACCAATGGATAATT +
Preference number: 2 (lower is better)
Translates to: YYNNQVSSVTSTQSSLLTTYPRD*THQWII
Trigger: AATTATCCATTGGTGAGTGCAGTCTCGAGGATAGGT...GGTGAGTAAACTGCTCTGTGTTGAAGTCACACTGCTGACCTGGTTATTGTAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CCA 90 bp TGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCTTTAATTAAAATCTTATGGGATCCCTTGCTTTaGTTGACAGTGTCACCCCAG +
Preference number: 2 (lower is better)
Translates to: CLRPAHIQKGASALIKILWDPLL*LTVSPQ
Trigger: CTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCA...TAAGATTTTAATTAAAGCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CCA 90 bp TATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCTTTACCAATCAGCTCCTTGTGTTGAGTTaGATCTTTTTCAGCAACCTG +
Preference number: 2 (lower is better)
Translates to: YFCCQLHTQSNTPSFTNQLLVLS*IFFSNL
Trigger: CAGGTTGCTGAAAAAGATCCAACTCAACACAAGGAG...CTGATTGGTAAAGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000615301.4
3UTR-3UTR TCA 90 bp ATACCTGTTACTAATTGTTCCCTAGTCCAGCTAACACATTTCACCCAAAGGGCATGCTACTTACAAAAGTaGCACCAGAAAAGAACCTGT +
Preference number: 2 (lower is better)
Translates to: IPVTNCSLVQLTHFTQRACYLQK*HQKRTC
Trigger: ACAGGTTCTTTTCTGGTGTCACTTTTGTAAGTAGCA...TGCCCTTTGGGTGAAATGTGTTAGCTGGACTAGGGAACAATTAGTAACAGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR GCA 90 bp AGCAGGACGTATGTAAGTTTTGTGTGTGCAATAGCTATGAACATACCTTGCAGACAACAATTTCCATGCTaGTGCAGTTTCTCCATCAAG +
Preference number: 2 (lower is better)
Translates to: SRTYVSFVCAIAMNIPCRQQFPC*CSFSIK
Trigger: CTTGATGGAGAAACTGCAGCAGCATGGAAATTGTTG...TCTGCAAGGTATGTTCATAGCTATTGCACACACAAAACTTACATACGTCCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR GCA 90 bp TTAATAGCAATGGCACAAAGTACCTCTATCTCTGTTCCTCACTCGGGCTATAAACAACAATTTCCATGCTaGTGCAGTTTCTCCATCAAG +
Preference number: 2 (lower is better)
Translates to: LIAMAQSTSISVPHSGYKQQFPC*CSFSIK
Trigger: CTTGATGGAGAAACTGCAGCAGCATGGAAATTGTTG...TTTATAGCCCGAGTGAGGAACAGAGATAGAGGTACTTTGTGCCATTGCTATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CCA 90 bp CAGCCACCACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGTCCATTGTAAAATTCAAGGTTTaGACTTTCACCTCAGTTCTG +
Preference number: 2 (lower is better)
Translates to: QPPHFHVDFVCLLALLSIVKFKV*TFTSVL
Trigger: CAGAACTGAGGTGAAAGTCCAAACCTTGAATTTTAC...AATGGACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGGTGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CCA 90 bp TTCTTTAATAGCAATGGCACAAAGTACCTCTATCTCTGTTCCTCACTCGGGCTAATAGCACAGAGCACATaGTTTACCAACTTACTACTG +
Preference number: 2 (lower is better)
Translates to: FFNSNGTKYLYLCSSLGLIAQST*FTNLLL
Trigger: CAGTAGTAAGTTGGTAAACCATGTGCTCTGTGCTAT...TAGCCCGAGTGAGGAACAGAGATAGAGGTACTTTGTGCCATTGCTATTAAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CCA 90 bp CCAATATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCTTTACCAAATAGCACAGAGCACATaGTTTACCAACTTACTACTG +
Preference number: 2 (lower is better)
Translates to: PIFLLPTPHSVKHPILYQIAQST*FTNLLL
Trigger: CAGTAGTAAGTTGGTAAACCATGTGCTCTGTGCTAT...TTGGTAAAGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CCA 90 bp TATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCTTTACCAATCAGTTTGTAAGCCAGTGTTaGGATTATAGCAGAGGAGTA +
Preference number: 2 (lower is better)
Translates to: YFCCQLHTQSNTPSFTNQFVSQC*DYSRGV
Trigger: TACTCCTCTGCTATAATCCCAACACTGGCTTACAAA...CTGATTGGTAAAGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR TCA 90 bp GTACCTCTATCTCTGTTCCTCACTCGGGCTATAAAATGCATCAACATTCGTTTTTGCTACTTACAAAAGTaGCACCAGAAAAGAACCTGT +
Preference number: 2 (lower is better)
Translates to: VPLSLFLTRAIKCINIRFCYLQK*HQKRTC
Trigger: ACAGGTTCTTTTCTGGTGTCACTTTTGTAAGTAGCA...AAAACGAATGTTGATGCATTTTATAGCCCGAGTGAGGAACAGAGATAGAGGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR TCA 90 bp CCAATATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCTTTACCAATTCACTGTGGTAGCCTaGAACATTGTATTTTTAGAG +
Preference number: 2 (lower is better)
Translates to: PIFLLPTPHSVKHPILYQFTVVA*NIVFLE
Trigger: CTCTAAAAATACAATGTTTCAGGCTACCACAGTGAA...TTGGTAAAGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATATTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR TCA 90 bp TTAATAGCAATGGCACAAAGTACCTCTATCTCTGTTCCTCACTCGGGCTATAAAGTAGGCAGAAAAAGGTaGGTGAATATCTTCCATCAA +
Preference number: 2 (lower is better)
Translates to: LIAMAQSTSISVPHSGYKVGRKR*VNIFHQ
Trigger: TTGATGGAAGATATTCACTCACCTTTTTCTGCCTAC...TTTATAGCCCGAGTGAGGAACAGAGATAGAGGTACTTTGTGCCATTGCTATTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR TCA 90 bp TACAATAACCAGGTCAGCAGTGTGACTTCAACACAGAGCAGTTTACTCACCTATCAGACTATCATTTACTaGACACACAACCAAAAACTG +
Preference number: 2 (lower is better)
Translates to: YNNQVSSVTSTQSSLLTYQTIIY*THNQKL
Trigger: CAGTTTTTGGTTGTGTGTTCAGTAAATGATAGTCTG...ATAGGTGAGTAAACTGCTCTGTGTTGAAGTCACACTGCTGACCTGGTTATTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR TCA 90 bp TATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCTTTACCAATCAGCAGACTATCATTTACTaGACACACAACCAAAAACTG +
Preference number: 2 (lower is better)
Translates to: YFCCQLHTQSNTPSFTNQQTIIY*THNQKL
Trigger: CAGTTTTTGGTTGTGTGTTCAGTAAATGATAGTCTG...CTGATTGGTAAAGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR GCA 90 bp ATACCTGTTACTAATTGTTCCCTAGTCCAGCTAACACATTTCACCCAAAGGGCAAGCAAGAAAAATGTGTaGTTGTCACTTATCTTCACC +
Preference number: 2 (lower is better)
Translates to: IPVTNCSLVQLTHFTQRASKKNV*LSLIFT
Trigger: GGTGAAGATAAGTGACAAGCACACATTTTTCTTGCT...TGCCCTTTGGGTGAAATGTGTTAGCTGGACTAGGGAACAATTAGTAACAGGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CCA 90 bp TTACCAACTTACTACTGTAAAATTCAAGGTTTGGACTTTCACCTCAGTTCTGTAGTCCTCGGGAGGCTTTaGACACAATCAATAGCATGT +
Preference number: 2 (lower is better)
Translates to: LPTYYCKIQGLDFHLSSVVLGRL*TQSIAC
Trigger: ACATGCTATTGATTGTGTCCAAAGCCTCCCGAGGAC...TACAGAACTGAGGTGAAAGTCCAAACCTTGAATTTTACAGTAGTAAGTTGGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR CAA 90 bp ATGTCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATaGAAAAGGACTTCCAAACATGTCAGGCTTCTGGTTTATGGATCA +
Preference number: 2 (lower is better)
Translates to: MSTALANITTLIMCL*KRTSKHVRLLVYGS
Trigger: TGATCCATAAACCAGAAGCCTGACATGTTTGGAAGTCCTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615301.4
3UTR-3UTR GCA 90 bp GTACCTCTATCTCTGTTCCTCACTCGGGCTATAAAATGCATCAACATTCGTTTTAGCAAGAAAAATGTGTaGTTGTCACTTATCTTCACC +
Preference number: 2 (lower is better)
Translates to: VPLSLFLTRAIKCINIRFSKKNV*LSLIFT
Trigger: GGTGAAGATAAGTGACAAGCACACATTTTTCTTGCT...AAAACGAATGTTGATGCATTTTATAGCCCGAGTGAGGAACAGAGATAGAGGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR GCA 90 bp TTCTTTAATAGCAATGGCACAAAGTACCTCTATCTCTGTTCCTCACTCGGGCTATGTAAGTTTTGTGTGTaGAATAGCTATGAACATACC +
Preference number: 2 (lower is better)
Translates to: FFNSNGTKYLYLCSSLGLCKFCV*NSYEHT
Trigger: GGTATGTTCATAGCTATTGCACACACAAAACTTACA...TAGCCCGAGTGAGGAACAGAGATAGAGGTACTTTGTGCCATTGCTATTAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR GCA 90 bp TTCTTTAATAGCAATGGCACAAAGTACCTCTATCTCTGTTCCTCACTCGGGCTAACTCGGGCTATAAAATaGATCAACATTCGTTTTTCT +
Preference number: 2 (lower is better)
Translates to: FFNSNGTKYLYLCSSLGLTRAIK*INIRFS
Trigger: AGAAAAACGAATGTTGATGCATTTTATAGCCCGAGT...TAGCCCGAGTGAGGAACAGAGATAGAGGTACTTTGTGCCATTGCTATTAAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CCA 90 bp AATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTTTGTTTGTAGTGATAATGACAGATaGTTATCCATTCTCGACAAC +
Preference number: 2 (lower is better)
Translates to: NSVNFVLQPPHFHVDFVCSDNDR*LSILDN
Trigger: GTTGTCGAGAATGGATAACCATCTGTCATTATCACT...ACAAACAAAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CCA 90 bp TTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTATATTTTGCAGACCTTaGGCCTGCAATTATTTCATT +
Preference number: 2 (lower is better)
Translates to: FTSAFMASNNCVCQHMDPIFCRP*ACNYFI
Trigger: AATGAAATAATTGCAGGCCCAAGGTCTGCAAAATAT...AGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
3UTR-3UTR CCA 90 bp AATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTTTGTTTGTGTCTTCTTTGTTTTCTaGTTGAATTTCGCCTTCATC +
Preference number: 2 (lower is better)
Translates to: NSVNFVLQPPHFHVDFVCVFFVF*LNFAFI
Trigger: GATGAAGGCGAAATTCAACCAGAAAACAAAGAAGAC...ACAAACAAAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000615301.4
3UTR-3UTR GCA 90 bp TGTTGTTCCACAACGAGTGTAACTGAACAGGTAGAGTATGCATTTAGAAAAATACAACAATTTCCATGCTaGTGCAGTTTCTCCATCAAG +
Preference number: 2 (lower is better)
Translates to: CCSTTSVTEQVEYAFRKIQQFPC*CSFSIK
Trigger: CTTGATGGAGAAACTGCAGCAGCATGGAAATTGTTG...TATTTTTCTAAATGCATACTCTACCTGTTCAGTTACACTCGTTGTGGAACAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR GCA 90 bp AATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTTTGTTTGTACTCGGGCTATAAAATaGATCAACATTCGTTTTTCT +
Preference number: 2 (lower is better)
Translates to: NSVNFVLQPPHFHVDFVCTRAIK*INIRFS
Trigger: AGAAAAACGAATGTTGATGCATTTTATAGCCCGAGT...ACAAACAAAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CCA 90 bp TGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCTTTAATTAAAATCTTACTATGTCTTCCTATTTaGGATCCCTTGCTTTGGTTG +
Preference number: 2 (lower is better)
Translates to: CLRPAHIQKGASALIKILLCLPI*DPLLWL
Trigger: CAACCAAAGCAAGGGATCCCAAATAGGAAGACATAG...TAAGATTTTAATTAAAGCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CCA 90 bp TGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCAATTTCCACTTACTTTTaGAGAACAAAAGGCAGACAA +
Preference number: 2 (lower is better)
Translates to: WHLTTVSVNTWILFTVNSISTYF*RTKGRQ
Trigger: TTGTCTGCCTTTTGTTCTCCAAAAGTAAGTGGAAAT...TGAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
3UTR-3UTR CCA 90 bp ATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCATATTTTGCAGACCTTaGGCCTGCAATTATTTCATT +
Preference number: 2 (lower is better)
Translates to: MASNNCVCQHMDPFHCQFIFCRP*ACNYFI
Trigger: AATGAAATAATTGCAGGCCCAAGGTCTGCAAAATAT...GAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
3UTR-3UTR CCA 90 bp TATCTTCACCATACTGTACATAAGAACTCTGATAAAATATGGTACTTGTGCCACTCTTTTTCAGCAACCTaGTCTTTGGTTTGGGGTTCA +
Preference number: 2 (lower is better)
Translates to: YLHHTVHKNSDKIWYLCHSFSAT*SLVWGS
Trigger: TGAACCCCAAACCAAAGACCAGGTTGCTGAAAAAGA...GTGGCACAAGTACCATATTTTATCAGAGTTCTTATGTACAGTATGGTGAAGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000615301.4
3UTR-3UTR GCA 90 bp TGTTGTTCCACAACGAGTGTAACTGAACAGGTAGAGTATGCATTTAGAAAAATAGCTATGAACATACCTTaGAGATATAAGCACGGTTCT +
Preference number: 2 (lower is better)
Translates to: CCSTTSVTEQVEYAFRKIAMNIP*RYKHGS
Trigger: AGAACCGTGCTTATATCTGCAAGGTATGTTCATAGC...TATTTTTCTAAATGCATACTCTACCTGTTCAGTTACACTCGTTGTGGAACAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CCA 90 bp TTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAAATTTCCACTTACTTTTaGAGAACAAAAGGCAGACAA +
Preference number: 2 (lower is better)
Translates to: FMASNNCVCQHMDPFHCQISTYF*RTKGRQ
Trigger: TTGTCTGCCTTTTGTTCTCCAAAAGTAAGTGGAAAT...TTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
3UTR-3UTR GCA 90 bp GTTTTCAGTTTATCTCAGTCTACTGTAGAAAATAACTTGTATGCCACAGTACCCACAACACTAATCATGTaGTTATTGAAAAGGACTTCC +
Preference number: 2 (lower is better)
Translates to: VFSLSQSTVENNLYATVPTTLIM*LLKRTS
Trigger: GGAAGTCCTTTTCAATAAGCACATGATTAGTGTTGT...GGGTACTGTGGCATACAAGTTATTTTCTACAGTAGACTGAGATAAACTGAAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CCA 90 bp TTACCAACTTACTACTGTAAAATTCAAGGTTTGGACTTTCACCTCAGTTCTGTAGTAAAATTCAAGGTTTaGACTTTCACCTCAGTTCTG +
Preference number: 2 (lower is better)
Translates to: LPTYYCKIQGLDFHLSSVVKFKV*TFTSVL
Trigger: CAGAACTGAGGTGAAAGTCCAAACCTTGAATTTTAC...TACAGAACTGAGGTGAAAGTCCAAACCTTGAATTTTACAGTAGTAAGTTGGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR GCA 90 bp TGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCTTTAATTAAAATCTTAACAACACTAATCATGTaGTTATTGAAAAGGACTTCC +
Preference number: 2 (lower is better)
Translates to: CLRPAHIQKGASALIKILTTLIM*LLKRTS
Trigger: GGAAGTCCTTTTCAATAAGCACATGATTAGTGTTGT...TAAGATTTTAATTAAAGCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR GCA 90 bp TATCTTCACCATACTGTACATAAGAACTCTGATAAAATATGGTACTTGTGCCACACAACACTAATCATGTaGTTATTGAAAAGGACTTCC +
Preference number: 2 (lower is better)
Translates to: YLHHTVHKNSDKIWYLCHTTLIM*LLKRTS
Trigger: GGAAGTCCTTTTCAATAAGCACATGATTAGTGTTGT...GTGGCACAAGTACCATATTTTATCAGAGTTCTTATGTACAGTATGGTGAAGATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR GCA 90 bp TATCTTCACCATACTGTACATAAGAACTCTGATAAAATATGGTACTTGTGCCACAATGTCTACAGCCCTTaGCAATATAACAACACTAAT +
Preference number: 2 (lower is better)
Translates to: YLHHTVHKNSDKIWYLCHNVYSP*QYNNTN
Trigger: ATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT...GTGGCACAAGTACCATATTTTATCAGAGTTCTTATGTACAGTATGGTGAAGATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR TCA 72 bp CCAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTaGAGTACGGCGCCGTGTCTCCACATGGAGTTTCCT +
Preference number: 3 (lower is better)
Translates to: PATPSVLVDREV*STAPCLHMEFP
Trigger: AGGAAACTCCATGTGGAGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR CCA 72 bp AGGTGTAGAGGAATCAGCCGAAACAGGAGCATCCTCTaGATAGGGCTGTACACACCCCAGGTTCCAGCCACA +
Preference number: 3 (lower is better)
Translates to: RCRGISRNRSIL*IGLYTPQVPAT
Trigger: TGTGGCTGGAACCTGGGGTGTGTACAGCCCTATCCAGAGGATGCTCCTGTTTCGGCTGATTCCTCTACACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR GCA 72 bp GCCAAAGCATCCATCCTCCGTACTCAGGGCAAACTATaGTGGGTGCTAATAGCCCTGTTGATGCCTGCCAGT +
Preference number: 3 (lower is better)
Translates to: AKASILRTQGKL*WVLIALLMPAS
Trigger: ACTGGCAGGCATCAACAGGGCTATTAGCACCCAGCATAGTTTGCCCTGAGTACGGAGGATGGATGCTTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CAA 90 bp ACTCAGGGCAAACTATGCTGGGTGCTAATAGCCCTGTTGATGCCTGCCAGTCAGGGTCCTCGGGAGGCTTaGGACACAATCAATAGCATG +
Preference number: 3 (lower is better)
Translates to: TQGKLCWVLIALLMPASQGPREA*DTINSM
Trigger: CATGCTATTGATTGTGTCCAAAGCCTCCCGAGGACC...CTGACTGGCAGGCATCAACAGGGCTATTAGCACCCAGCATAGTTTGCCCTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR CCA 72 bp AATAGCCCTGTTGATGCCTGCCAGTCAGAACTTCCATaGGACTGTTCAGCTGCTGAAACTGCTGTGGGTGAG +
Preference number: 3 (lower is better)
Translates to: NSPVDACQSELP*DCSAAETAVGE
Trigger: CTCACCCACAGCAGTTTCAGCAGCTGAACAGTCCCATGGAAGTTCTGACTGGCAGGCATCAACAGGGCTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR CCA 72 bp AAAGCATCCATCCTCCGTACTCAGGGCAAACTATGCTaGGTGCTAATAGCCCTGTTGATGCCTGCCAGTCAG +
Preference number: 3 (lower is better)
Translates to: KASILRTQGKLC*VLIALLMPASQ
Trigger: CTGACTGGCAGGCATCAACAGGGCTATTAGCACCCAGCATAGTTTGCCCTGAGTACGGAGGATGGATGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CAA 90 bp TCCTATTTGGGATCCCTTGCTTTGGTTGACAGTGTCACCCCAGCCAGGGGCAAACTAAATGTGTGTGAGTaGCATGCTGGCAGACAGATC +
Preference number: 3 (lower is better)
Translates to: SYLGSLALVDSVTPARGKLNVCE*HAGRQI
Trigger: GATCTGTCTGCCAGCATGCAACTCACACACATTTAG...TTTGCCCCTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CAA 90 bp ACTCAGGGCAAACTATGCTGGGTGCTAATAGCCCTGTTGATGCCTGCCAGTCAGCCTATTTGGGATCCCTaGCTTTGGTTGACAGTGTCA +
Preference number: 3 (lower is better)
Translates to: TQGKLCWVLIALLMPASQPIWDP*LWLTVS
Trigger: TGACACTGTCAACCAAAGCAAGGGATCCCAAATAGG...CTGACTGGCAGGCATCAACAGGGCTATTAGCACCCAGCATAGTTTGCCCTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR GCA 72 bp CAAACTATGCTGGGTGCTAATAGCCCTGTTGATGCCTaGCAGTCAGAACTTCCATGGGACTGTTCAGCTGCT +
Preference number: 3 (lower is better)
Translates to: QTMLGANSPVDA*QSELPWDCSAA
Trigger: AGCAGCTGAACAGTCCCATGGAAGTTCTGACTGGCAGGCATCAACAGGGCTATTAGCACCCAGCATAGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CAA 90 bp ATGTCTTCCTATTTGGGATCCCTTGCTTTGGTTGACAGTGTCACCCCAGCCAGGTTTATGGATCAGCAGTaGGAGCTGTCTGTCTCTCTC +
Preference number: 3 (lower is better)
Translates to: MSSYLGSLALVDSVTPARFMDQQ*ELSVSL
Trigger: GAGAGAGACAGACAGCTCCAACTGCTGATCCATAAA...CCTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGAAGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615301.4
3UTR CCA 72 bp GGCGCAGACTCTCTCAGAGCATGCAGGAGACTTGGTTaGTATCACTCTAAGTTGGAAGAACTGTGTCACAGT +
Preference number: 3 (lower is better)
Translates to: GADSLRACRRLG*YHSKLEELCHS
Trigger: ACTGTGACACAGTTCTTCCAACTTAGAGTGATACCAACCAAGTCTCCTGCATGCTCTGAGAGAGTCTGCGCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CAA 90 bp AGCATCCCCACGGAGGTCCTCGGGAGGCTTTGGACACAATCAATAGCATGTATTAACCTGGTCTTTGGTTaGGGGTTCATGTGTAGAAAC +
Preference number: 3 (lower is better)
Translates to: SIPTEVLGRLWTQSIACINLVFG*GFMCRN
Trigger: GTTTCTACACATGAACCCCAAACCAAAGACCAGGTT...AATACATGCTATTGATTGTGTCCAAAGCCTCCCGAGGACCTCCGTGGGGATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615301.4
3UTR GCA 72 bp TTTGAAACTGGCTCAGGCGCAGACTCTCTCAGAGCATaGAGGAGACTTGGTTGGTATCACTCTAAGTTGGAA +
Preference number: 3 (lower is better)
Translates to: FETGSGADSLRA*RRLGWYHSKLE
Trigger: TTCCAACTTAGAGTGATACCAACCAAGTCTCCTGCATGCTCTGAGAGAGTCTGCGCCTGAGCCAGTTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR CCA 72 bp GCAGATATAAGCACGGTTCTCCTATGTCTTCCTATTTaGGATCCCTTGCTTTGGTTGACAGTGTCACCCCAG +
Preference number: 3 (lower is better)
Translates to: ADISTVLLCLPI*DPLLWLTVSPQ
Trigger: CTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGAAGACATAGGAGAACCGTGCTTATATCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR CCA 72 bp AACTTCCATGGGACTGTTCAGCTGCTGAAACTGCTGTaGGTGAGGACTTTGTTTGAGACCAGCTCACATACA +
Preference number: 3 (lower is better)
Translates to: NFHGTVQLLKLL*VRTLFETSSHT
Trigger: TGTATGTGAGCTGGTCTCAAACAAAGTCCTCACCCACAGCAGTTTCAGCAGCTGAACAGTCCCATGGAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CAA 90 bp TCCTATTTGGGATCCCTTGCTTTGGTTGACAGTGTCACCCCAGCCAGGGGCAAAACTGTAGAAAATAACTaGTATGCCACAGTACCCAAC +
Preference number: 3 (lower is better)
Translates to: SYLGSLALVDSVTPARGKTVENN*YATVPN
Trigger: GTTGGGTACTGTGGCATACAAGTTATTTTCTACAGT...TTTGCCCCTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CAA 90 bp CAGCCACCACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGTCCATTGGTCCTCGGGAGGCTTaGGACACAATCAATAGCATG +
Preference number: 3 (lower is better)
Translates to: QPPHFHVDFVCLLALLSIGPREA*DTINSM
Trigger: CATGCTATTGATTGTGTCCAAAGCCTCCCGAGGACC...AATGGACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGGTGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CAA 90 bp TCCTATTTGGGATCCCTTGCTTTGGTTGACAGTGTCACCCCAGCCAGGGGCAAACTAGGAATGTGTGTTTaGCTAAACAGCTTACTTATG +
Preference number: 3 (lower is better)
Translates to: SYLGSLALVDSVTPARGKLGMCV*LNSLLM
Trigger: CATAAGTAAGCTGTTTAGCAAAACACACATTCCTAG...TTTGCCCCTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CAA 90 bp AGCAGGACGTATGTAAGTTTTGTGTGTGCAATAGCTATGAACATACCTTGCAGATTGGGATCCCTTGCTTaGGTTGACAGTGTCACCCCA +
Preference number: 3 (lower is better)
Translates to: SRTYVSFVCAIAMNIPCRLGSLA*VDSVTP
Trigger: TGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAA...TCTGCAAGGTATGTTCATAGCTATTGCACACACAAAACTTACATACGTCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR GCA 72 bp CTTGTATGCCACAGTACCCAACAATTTCCATGCTGCTaGAGTTTCTCCATCAAGAGGATCAGACCCAAAACA +
Preference number: 3 (lower is better)
Translates to: LVCHSTQQFPCC*SFSIKRIRPKT
Trigger: TGTTTTGGGTCTGATCCTCTTGATGGAGAAACTGCAGCAGCATGGAAATTGTTGGGTACTGTGGCATACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR CCA 72 bp TATCACTCTAAGTTGGAAGAACTGTGTCACAGTTTGTaGCTGCTACTGCCTCTCCTGATGCTTAGCAACAAG +
Preference number: 3 (lower is better)
Translates to: YHSKLEELCHSL*LLLPLLMLSNK
Trigger: CTTGTTGCTAAGCATCAGGAGAGGCAGTAGCAGCCACAAACTGTGACACAGTTCTTCCAACTTAGAGTGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR CCA 72 bp TGGTTGAATTTCGCCTTCATCCTCCTTGTGTTGAGTTaGATCTTTTTCAGCAACCTGGTCTTTGGTTTGGGG +
Preference number: 3 (lower is better)
Translates to: WLNFAFILLVLS*IFFSNLVFGLG
Trigger: CCCCAAACCAAAGACCAGGTTGCTGAAAAAGATCCAACTCAACACAAGGAGGATGAAGGCGAAATTCAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615301.4
3UTR TCA 72 bp CCTCATAACAGAGCCAACTCTTTATTCTCAAAGCTATaGTTTGAAACTGGCTCAGGCGCAGACTCTCTCAGA +
Preference number: 3 (lower is better)
Translates to: PHNRANSLFSKL*FETGSGADSLR
Trigger: TCTGAGAGAGTCTGCGCCTGAGCCAGTTTCAAATCATAGCTTTGAGAATAAAGAGTTGGCTCTGTTATGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CAA 90 bp AGCAGGACGTATGTAAGTTTTGTGTGTGCAATAGCTATGAACATACCTTGCAGATATGGGACTACGAGTTaGATGCCAGCTCCTGAGTTT +
Preference number: 3 (lower is better)
Translates to: SRTYVSFVCAIAMNIPCRYGTTS*MPAPEF
Trigger: AAACTCAGGAGCTGGCATCAAACTCGTAGTCCCATA...TCTGCAAGGTATGTTCATAGCTATTGCACACACAAAACTTACATACGTCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CAA 90 bp TTAATAGCAATGGCACAAAGTACCTCTATCTCTGTTCCTCACTCGGGCTATAAATATGGGACTACGAGTTaGATGCCAGCTCCTGAGTTT +
Preference number: 3 (lower is better)
Translates to: LIAMAQSTSISVPHSGYKYGTTS*MPAPEF
Trigger: AAACTCAGGAGCTGGCATCAAACTCGTAGTCCCATA...TTTATAGCCCGAGTGAGGAACAGAGATAGAGGTACTTTGTGCCATTGCTATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CAA 90 bp CCAATATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCTTTACCAACCTCCTTGTGTTGAGTaGGATCTTTTTCAGCAACCT +
Preference number: 3 (lower is better)
Translates to: PIFLLPTPHSVKHPILYQPPCVE*DLFQQP
Trigger: AGGTTGCTGAAAAAGATCCAACTCAACACAAGGAGG...TTGGTAAAGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATATTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000615301.4
3UTR-3UTR CAA 90 bp TGTTGTTCCACAACGAGTGTAACTGAACAGGTAGAGTATGCATTTAGAAAAATAGGTCCTCGGGAGGCTTaGGACACAATCAATAGCATG +
Preference number: 3 (lower is better)
Translates to: CCSTTSVTEQVEYAFRKIGPREA*DTINSM
Trigger: CATGCTATTGATTGTGTCCAAAGCCTCCCGAGGACC...TATTTTTCTAAATGCATACTCTACCTGTTCAGTTACACTCGTTGTGGAACAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CAA 90 bp TGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCTTTAATTAAAATCTTATTGGGATCCCTTGCTTaGGTTGACAGTGTCACCCCA +
Preference number: 3 (lower is better)
Translates to: CLRPAHIQKGASALIKILLGSLA*VDSVTP
Trigger: TGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAA...TAAGATTTTAATTAAAGCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CAA 90 bp TATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCTTTACCAATCAGCCATGTGGATTTTGTTaGTCTATTAGCTCTCCTGTC +
Preference number: 3 (lower is better)
Translates to: YFCCQLHTQSNTPSFTNQPCGFC*SISSPV
Trigger: GACAGGAGAGCTAATAGACAAACAAAATCCACATGG...CTGATTGGTAAAGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CAA 90 bp ACAGCAGTGAAGCAAGAAAAATGTGTGCTTGTCACTTATCTTCACCATACTGTATCAGCAACCTGGTCTTaGGTTTGGGGTTCATGTGTA +
Preference number: 3 (lower is better)
Translates to: TAVKQEKCVLVTYLHHTVSATWS*VWGSCV
Trigger: TACACATGAACCCCAAACCAAAGACCAGGTTGCTGA...TACAGTATGGTGAAGATAAGTGACAAGCACACATTTTTCTTGCTTCACTGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615301.4
3UTR-3UTR CAA 90 bp CCAATATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCTTTACCAATTCATCCTCCTTGTGTaGAGTTGGATCTTTTTCAGC +
Preference number: 3 (lower is better)
Translates to: PIFLLPTPHSVKHPILYQFILLV*SWIFFS
Trigger: GCTGAAAAAGATCCAACTCAACACAAGGAGGATGAA...TTGGTAAAGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATATTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000615301.4
3UTR TCA 72 bp GTCAAACACCCCATCCTTTACCAATCAGAATATCTCTaGGAACAAAAACCTAATGACCCTAGAAGCTCTCTG +
Preference number: 3 (lower is better)
Translates to: VKHPILYQSEYL*EQKPNDPRSSL
Trigger: CAGAGAGCTTCTAGGGTCATTAGGTTTTTGTTCTCAGAGATATTCTGATTGGTAAAGGATGGGGTGTTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CAA 90 bp CAGCCACCACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGTCCATTCTAGGAATGTGTGTTTaGCTAAACAGCTTACTTATG +
Preference number: 3 (lower is better)
Translates to: QPPHFHVDFVCLLALLSILGMCV*LNSLLM
Trigger: CATAAGTAAGCTGTTTAGCAAAACACACATTCCTAG...AATGGACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGGTGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CAA 90 bp TTCTTTAATAGCAATGGCACAAAGTACCTCTATCTCTGTTCCTCACTCGGGCTACTTTCAGCATTCCATTaGATGAGTGGTATGCACATT +
Preference number: 3 (lower is better)
Translates to: FFNSNGTKYLYLCSSLGLLSAFH*MSGMHI
Trigger: AATGTGCATACCACTCATCAAATGGAATGCTGAAAG...TAGCCCGAGTGAGGAACAGAGATAGAGGTACTTTGTGCCATTGCTATTAAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CAA 90 bp TTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTCATATTTTGCAGACCTaGGGCCTGCAATTATTTCAT +
Preference number: 3 (lower is better)
Translates to: FTSAFMASNNCVCQHMDPHILQT*GLQLFH
Trigger: ATGAAATAATTGCAGGCCCAAGGTCTGCAAAATATG...AGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
3UTR-3UTR CAA 90 bp TTAATAGCAATGGCACAAAGTACCTCTATCTCTGTTCCTCACTCGGGCTATAAACTTTCAGCATTCCATTaGATGAGTGGTATGCACATT +
Preference number: 3 (lower is better)
Translates to: LIAMAQSTSISVPHSGYKLSAFH*MSGMHI
Trigger: AATGTGCATACCACTCATCAAATGGAATGCTGAAAG...TTTATAGCCCGAGTGAGGAACAGAGATAGAGGTACTTTGTGCCATTGCTATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CAA 90 bp AATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTTTGTTTGTACTGTAGAAAATAACTaGTATGCCACAGTACCCAAC +
Preference number: 3 (lower is better)
Translates to: NSVNFVLQPPHFHVDFVCTVENN*YATVPN
Trigger: GTTGGGTACTGTGGCATACAAGTTATTTTCTACAGT...ACAAACAAAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CAA 90 bp TTACCAACTTACTACTGTAAAATTCAAGGTTTGGACTTTCACCTCAGTTCTGTATATGGGACTACGAGTTaGATGCCAGCTCCTGAGTTT +
Preference number: 3 (lower is better)
Translates to: LPTYYCKIQGLDFHLSSVYGTTS*MPAPEF
Trigger: AAACTCAGGAGCTGGCATCAAACTCGTAGTCCCATA...TACAGAACTGAGGTGAAAGTCCAAACCTTGAATTTTACAGTAGTAAGTTGGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CAA 90 bp TGTTGTTCCACAACGAGTGTAACTGAACAGGTAGAGTATGCATTTAGAAAAATACTAAATGTGTGTGAGTaGCATGCTGGCAGACAGATC +
Preference number: 3 (lower is better)
Translates to: CCSTTSVTEQVEYAFRKILNVCE*HAGRQI
Trigger: GATCTGTCTGCCAGCATGCAACTCACACACATTTAG...TATTTTTCTAAATGCATACTCTACCTGTTCAGTTACACTCGTTGTGGAACAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CAA 90 bp TGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCACATATTTTGCAGACCTaGGGCCTGCAATTATTTCAT +
Preference number: 3 (lower is better)
Translates to: WHLTTVSVNTWILFTVNSHILQT*GLQLFH
Trigger: ATGAAATAATTGCAGGCCCAAGGTCTGCAAAATATG...TGAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
3UTR-3UTR CAA 90 bp ACAGCAGTGAAGCAAGAAAAATGTGTGCTTGTCACTTATCTTCACCATACTGTATACAACTGGTTCGGCTaGTTTTTCACCGTCAATGTA +
Preference number: 3 (lower is better)
Translates to: TAVKQEKCVLVTYLHHTVYNWFG*FFTVNV
Trigger: TACATTGACGGTGAAAAACAAGCCGAACCAGTTGTA...TACAGTATGGTGAAGATAAGTGACAAGCACACATTTTTCTTGCTTCACTGCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000615301.4
3UTR-3UTR CAA 90 bp TGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCTTTAATTAAAATCTTACCTATGTCTTCCTATTaGGGATCCCTTGCTTTGGTT +
Preference number: 3 (lower is better)
Translates to: CLRPAHIQKGASALIKILPMSSY*GSLALV
Trigger: AACCAAAGCAAGGGATCCCAAATAGGAAGACATAGG...TAAGATTTTAATTAAAGCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR GCA 72 bp TCTACAGCCCTTGCCAATATAACAACACTAATCATGTaGTTATTGAAAAGGACTTCCAAACATGTCAGGCTT +
Preference number: 3 (lower is better)
Translates to: STALANITTLIM*LLKRTSKHVRL
Trigger: AAGCCTGACATGTTTGGAAGTCCTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR-3UTR CAA 90 bp TGTTGTTCCACAACGAGTGTAACTGAACAGGTAGAGTATGCATTTAGAAAAATACTAGGAATGTGTGTTTaGCTAAACAGCTTACTTATG +
Preference number: 3 (lower is better)
Translates to: CCSTTSVTEQVEYAFRKILGMCV*LNSLLM
Trigger: CATAAGTAAGCTGTTTAGCAAAACACACATTCCTAG...TATTTTTCTAAATGCATACTCTACCTGTTCAGTTACACTCGTTGTGGAACAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR TCA 72 bp CAGCTTACTTATGTTTATAGTTGCTACTTACAAAAGTaGCACCAGAAAAGAACCTGTATTCTGAATACAGTG +
Preference number: 3 (lower is better)
Translates to: QLTYVYSCYLQK*HQKRTCILNTV
Trigger: CACTGTATTCAGAATACAGGTTCTTTTCTGGTGTCACTTTTGTAAGTAGCAACTATAAACATAAGTAAGCTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp AGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTCTAGGGAGCCGCTGGTaGCCACCTTCCCCACACAAG +
Preference number: 4 (lower is better)
Translates to: SHTISISRPGGLKYGAVSLGSRW*PPSPHK
Trigger: CTTGTGTGGGGAAGGTGGGCACCAGCGGCTCCCTAG...AGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp AGCATCCCCACGGAGGTCCTCGGGAGGCTTTGGACACAATCAATAGCATGTATTGTCCCGTTCAGGGGGTaGAGGAACGAGGGCGGGTCG +
Preference number: 4 (lower is better)
Translates to: SIPTEVLGRLWTQSIACIVPFRG*RNEGGS
Trigger: CGACCCGCCCTCGTTCCTCCACCCCCTGAACGGGAC...AATACATGCTATTGATTGTGTCCAAAGCCTCCCGAGGACCTCCGTGGGGATGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000615301.4
CDS-3UTR CCA 90 bp AGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTCCACTACCCGGAAGTTaGATCCGCTCCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SHTISISRPGGLKYGAVSPLPGS*IRSRSS
Trigger: GGAGGAGCGGGAGCGGATCCAACTTCCGGGTAGTGG...AGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615301.4
CDS-3UTR CCA 90 bp AGCCGAAACAGGAGCATCCTCTGGATAGGGCTGTACACACCCCAGGTTCCAGCCGATAGGATTGGGAGGTaGAGGGGGAAGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SRNRSILWIGLYTPQVPADRIGR*RGKWWW
Trigger: CCACCACCACTTCCCCCTCCACCTCCCAATCCTATC...GGCTGGAACCTGGGGTGTGTACAGCCCTATCCAGAGGATGCTCCTGTTTCGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp AGCCGAAACAGGAGCATCCTCTGGATAGGGCTGTACACACCCCAGGTTCCAGCCGCTTTCAAAAGCTGCTaGTCAGGGATGGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SRNRSILWIGLYTPQVPAAFKSC*SGMELC
Trigger: GCAGAGCTCCATCCCTGATCAGCAGCTTTTGAAAGC...GGCTGGAACCTGGGGTGTGTACAGCCCTATCCAGAGGATGCTCCTGTTTCGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp ATGTCTTCCTATTTGGGATCCCTTGCTTTGGTTGACAGTGTCACCCCAGCCAGGCTAGGGAGCCGCTGGTaGCCACCTTCCCCACACAAG +
Preference number: 4 (lower is better)
Translates to: MSSYLGSLALVDSVTPARLGSRW*PPSPHK
Trigger: CTTGTGTGGGGAAGGTGGGCACCAGCGGCTCCCTAG...CCTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGAAGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp AGCCAAAGCATCCATCCTCCGTACTCAGGGCAAACTATGCTGGGTGCTAATAGCGTGGGAACTCCACTTTaGACGCTTCCCGGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: SQSIHPPYSGQTMLGANSVGTPL*TLPGGR
Trigger: GCGACCCCCGGGAAGCGTCCAAAGTGGAGTTCCCAC...GCTATTAGCACCCAGCATAGTTTGCCCTGAGTACGGAGGATGGATGCTTTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260777.14
CDS-3UTR CCA 90 bp AGCCGAAACAGGAGCATCCTCTGGATAGGGCTGTACACACCCCAGGTTCCAGCCTGGGATCCCTTGCTTTaGTTGACAGTGTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: SRNRSILWIGLYTPQVPAWDPLL*LTVSPQ
Trigger: CTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCA...GGCTGGAACCTGGGGTGTGTACAGCCCTATCCAGAGGATGCTCCTGTTTCGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp ACTCAGGGCAAACTATGCTGGGTGCTAATAGCCCTGTTGATGCCTGCCAGTCAGAGAGAAAACCGGCTGTaGGTTCGCAGCGTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: TQGKLCWVLIALLMPASQRENRL*VRSVCG
Trigger: CCCACACACGCTGCGAACCCACAGCCGGTTTTCTCT...CTGACTGGCAGGCATCAACAGGGCTATTAGCACCCAGCATAGTTTGCCCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260777.14
CDS-3UTR CCA 90 bp TTGAGCTTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGGGGGGCGGCCCTGCGTaGGGTCGCTCCGCACCCTTT +
Preference number: 4 (lower is better)
Translates to: LSFTSAFMASNNCVCQHMGGGPA*GRSAPF
Trigger: AAAGGGTGCGGAGCGACCCCACGCAGGGCCGCCCCC...CATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAAGCTCAA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000392903.3
CDS-3UTR CCA 90 bp ACTCAGGGCAAACTATGCTGGGTGCTAATAGCCCTGTTGATGCCTGCCAGTCAGAAAGCAAGATGCCGGTaGCTTGCGGCTCCACTACCC +
Preference number: 4 (lower is better)
Translates to: TQGKLCWVLIALLMPASQKARCR*LAAPLP
Trigger: GGGTAGTGGAGCCGCAAGCCACCGGCATCTTGCTTT...CTGACTGGCAGGCATCAACAGGGCTATTAGCACCCAGCATAGTTTGCCCTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TCCTATTTGGGATCCCTTGCTTTGGTTGACAGTGTCACCCCAGCCAGGGGCAAACCACTGCCACTGGGGTaGGATCGTTTCCGGATCATG +
Preference number: 4 (lower is better)
Translates to: SYLGSLALVDSVTPARGKPLPLG*DRFRIM
Trigger: CATGATCCGGAAACGATCCCACCCCAGTGGCAGTGG...TTTGCCCCTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp AGCCGAAACAGGAGCATCCTCTGGATAGGGCTGTACACACCCCAGGTTCCAGCCCGCCGTGTCTCCACATaGAGTTTCCTCTTCAACTTC +
Preference number: 4 (lower is better)
Translates to: SRNRSILWIGLYTPQVPARRVST*SFLFNF
Trigger: GAAGTTGAAGAGGAAACTCCATGTGGAGACACGGCG...GGCTGGAACCTGGGGTGTGTACAGCCCTATCCAGAGGATGCTCCTGTTTCGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp ATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCATGCCAGCCTGTGGCTaGCGGCGCGGCAGGACGCGC +
Preference number: 4 (lower is better)
Translates to: MASNNCVCQHMDPFHCQFMPACG*RRGRTR
Trigger: GCGCGTCCTGCCGCGCCGGCAGCCACAGGCTGGCAT...GAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392903.3
CDS-3UTR CCA 90 bp ATGTCTTCCTATTTGGGATCCCTTGCTTTGGTTGACAGTGTCACCCCAGCCAGGGGTTCGCAGCGTGTGTaGGAACTCCACTTTGGACGC +
Preference number: 4 (lower is better)
Translates to: MSSYLGSLALVDSVTPARGSQRV*ELHFGR
Trigger: GCGTCCAAAGTGGAGTTCCCACACACGCTGCGAACC...CCTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGAAGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260777.14
3UTR CAA 72 bp AGCACGGTTCTCCTATGTCTTCCTATTTGGGATCCCTaGCTTTGGTTGACAGTGTCACCCCAGCCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: STVLLCLPIWDP*LWLTVSPQPGA
Trigger: TGCCCCTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGAAGACATAGGAGAACCGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp TGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCAGGTCGGCAGCCGCTATaGCAGCCTGTGGCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: WHLTTVSVNTWILFTVNSGRQPL*QPVAAG
Trigger: GCCGGCAGCCACAGGCTGGCATAGCGGCTGCCGACC...TGAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392903.3
CDS-3UTR GCA 90 bp AGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTACTCAGGGCAAACTATaGTGGGTGCTAATAGCCCTG +
Preference number: 4 (lower is better)
Translates to: SHTISISRPGGLKYGAVSTQGKL*WVLIAL
Trigger: CAGGGCTATTAGCACCCAGCATAGTTTGCCCTGAGT...AGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp ACAGCAGTGAAGCAAGAAAAATGTGTGCTTGTCACTTATCTTCACCATACTGTAGGGGGCGGCCCTGCGTaGGGTCGCTCCGCACCCTTT +
Preference number: 4 (lower is better)
Translates to: TAVKQEKCVLVTYLHHTVGGGPA*GRSAPF
Trigger: AAAGGGTGCGGAGCGACCCCACGCAGGGCCGCCCCC...TACAGTATGGTGAAGATAAGTGACAAGCACACATTTTTCTTGCTTCACTGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260777.14
CDS-3UTR CCA 90 bp TTGAGCTTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGGTCCCGTTCAGGGGGTaGAGGAACGAGGGCGGGTCG +
Preference number: 4 (lower is better)
Translates to: LSFTSAFMASNNCVCQHMVPFRG*RNEGGS
Trigger: CGACCCGCCCTCGTTCCTCCACCCCCTGAACGGGAC...CATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAAGCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392903.3
CDS-3UTR CCA 90 bp CTGTGGGTGAGGACTTTGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCCCACTGCCACTGGGGTaGGATCGTTTCCGGATCATG +
Preference number: 4 (lower is better)
Translates to: LWVRTLFETSSHTKGCKCPLPLG*DRFRIM
Trigger: CATGATCCGGAAACGATCCCACCCCAGTGGCAGTGG...GCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACAAAGTCCTCACCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp AGCCGAAACAGGAGCATCCTCTGGATAGGGCTGTACACACCCCAGGTTCCAGCCACACTGGCATGGATTTaGACTCTGAGGTGGCTAATA +
Preference number: 4 (lower is better)
Translates to: SRNRSILWIGLYTPQVPATLAWI*TLRWLI
Trigger: TATTAGCCACCTCAGAGTCCAAATCCATGCCAGTGT...GGCTGGAACCTGGGGTGTGTACAGCCCTATCCAGAGGATGCTCCTGTTTCGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355371.9
CDS-3UTR CCA 90 bp AGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTCGCCGTGTCTCCACATaGAGTTTCCTCTTCAACTTC +
Preference number: 4 (lower is better)
Translates to: SHTISISRPGGLKYGAVSRRVST*SFLFNF
Trigger: GAAGTTGAAGAGGAAACTCCATGTGGAGACACGGCG...AGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp CCAATATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCTTTACCAACGGCTAGGGAGCCGCTaGTGCCCACCTTCCCCACAC +
Preference number: 4 (lower is better)
Translates to: PIFLLPTPHSVKHPILYQRLGSR*CPPSPH
Trigger: GTGTGGGGAAGGTGGGCACCAGCGGCTCCCTAGCCG...TTGGTAAAGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATATTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp TTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAAGGGAGATGGGCTGCGTaGGGTGCCGGGTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: FMASNNCVCQHMDPFHCQGRWAA*GAGSRL
Trigger: GAGCCTGGACCCGGCACCTCACGCAGCCCATCTCCC...TTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392901.10
CDS-3UTR GCA 90 bp AGCCGAAACAGGAGCATCCTCTGGATAGGGCTGTACACACCCCAGGTTCCAGCCAGCTCCAGGTTTACTTaGATCTCCTCATACTCTTCT +
Preference number: 4 (lower is better)
Translates to: SRNRSILWIGLYTPQVPASSRFT*ISSYSS
Trigger: AGAAGAGTATGAGGAGATGCAAGTAAACCTGGAGCT...GGCTGGAACCTGGGGTGTGTACAGCCCTATCCAGAGGATGCTCCTGTTTCGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp AGCCGAAACAGGAGCATCCTCTGGATAGGGCTGTACACACCCCAGGTTCCAGCCTATTCGCCTATTGCTTaGTCCTTCAGACTGGTAATG +
Preference number: 4 (lower is better)
Translates to: SRNRSILWIGLYTPQVPAYSPIA*SFRLVM
Trigger: CATTACCAGTCTGAAGGAGCAAGCAATAGGCGAATA...GGCTGGAACCTGGGGTGTGTACAGCCCTATCCAGAGGATGCTCCTGTTTCGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAACGCTATGCCAGCCTGTaGCTGCCGGCGCGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: FMASNNCVCQHMDPFHCQRYASL*LPARQD
Trigger: GTCCTGCCGCGCCGGCAGCCACAGGCTGGCATAGCG...TTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392903.3
CDS-3UTR CCA 90 bp CTTCCAAACATGTCAGGCTTCTGGTTTATGGATCAGCAGTTGGAGCTGTCTGTCCCGAGCTGTTCATTTTaGCGGGTGGGGCCGGGAATA +
Preference number: 4 (lower is better)
Translates to: LPNMSGFWFMDQQLELSVPSCSF*RVGPGI
Trigger: TATTCCCGGCCCCACCCGCCAAAATGAACAGCTCGG...GACAGACAGCTCCAACTGCTGATCCATAAACCAGAAGCCTGACATGTTTGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615301.4
CDS-3UTR CCA 90 bp AGCCGAAACAGGAGCATCCTCTGGATAGGGCTGTACACACCCCAGGTTCCAGCCACTGAATTCTCAGACTaGTTCACTCGTTTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: SRNRSILWIGLYTPQVPATEFSD*FTRFWS
Trigger: ACTCCAGAAACGAGTGAACCAGTCTGAGAATTCAGT...GGCTGGAACCTGGGGTGTGTACAGCCCTATCCAGAGGATGCTCCTGTTTCGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp AGCCGAAACAGGAGCATCCTCTGGATAGGGCTGTACACACCCCAGGTTCCAGCCTCTTTTTCAGCAACCTaGTCTTTGGTTTGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: SRNRSILWIGLYTPQVPASFSAT*SLVWGS
Trigger: TGAACCCCAAACCAAAGACCAGGTTGCTGAAAAAGA...GGCTGGAACCTGGGGTGTGTACAGCCCTATCCAGAGGATGCTCCTGTTTCGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp AGCATCCCCACGGAGGTCCTCGGGAGGCTTTGGACACAATCAATAGCATGTATTCTGTGTCACAGTTTGTaGCTGCTACTGCCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SIPTEVLGRLWTQSIACILCHSL*LLLPLL
Trigger: CAGGAGAGGCAGTAGCAGCCACAAACTGTGACACAG...AATACATGCTATTGATTGTGTCCAAAGCCTCCCGAGGACCTCCGTGGGGATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp TTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAACGCGGAGCGCGCGAGTaGGATCATCCCCACGCACCT +
Preference number: 4 (lower is better)
Translates to: FMASNNCVCQHMDPFHCQRGARE*DHPHAP
Trigger: AGGTGCGTGGGGATGATCTCACTCGCGCGCTCCGCG...TTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392903.3
CDS-3UTR TCA 90 bp CAGTCTACTGTAGAAAATAACTTGTATGCCACAGTACCCAACAATTTCCATGCTCGCGGAGCGCGCGAGTaGGATCATCCCCACGCACCT +
Preference number: 4 (lower is better)
Translates to: QSTVENNLYATVPNNFHARGARE*DHPHAP
Trigger: AGGTGCGTGGGGATGATCTCACTCGCGCGCTCCGCG...AGCATGGAAATTGTTGGGTACTGTGGCATACAAGTTATTTTCTACAGTAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000615301.4
CDS-3UTR TCA 90 bp ACTCAGGGCAAACTATGCTGGGTGCTAATAGCCCTGTTGATGCCTGCCAGTCAGATGGGACTACGAGTTTaGTGCCAGCTCCTGAGTTTT +
Preference number: 4 (lower is better)
Translates to: TQGKLCWVLIALLMPASQMGLRV*CQLLSF
Trigger: AAAACTCAGGAGCTGGCATCAAACTCGTAGTCCCAT...CTGACTGGCAGGCATCAACAGGGCTATTAGCACCCAGCATAGTTTGCCCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp AGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTGGTGAGGACTTTGTTTaGGACCAGCTCACATACAAA +
Preference number: 4 (lower is better)
Translates to: SHTISISRPGGLKYGAVSGEDFV*DQLTYK
Trigger: TTTGTATGTGAGCTGGTCTCAAACAAAGTCCTCACC...AGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp AGCATCCCCACGGAGGTCCTCGGGAGGCTTTGGACACAATCAATAGCATGTATTACCAGGTCAGCAGTGTaGCTTCAACACAGAGCAGTT +
Preference number: 4 (lower is better)
Translates to: SIPTEVLGRLWTQSIACITRSAV*LQHRAV
Trigger: AACTGCTCTGTGTTGAAGTCACACTGCTGACCTGGT...AATACATGCTATTGATTGTGTCCAAAGCCTCCCGAGGACCTCCGTGGGGATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp TATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCTTTACCAATCAGGTAGACCGGGAGGTCTaGAGTACGGCGCCGTGTCTC +
Preference number: 4 (lower is better)
Translates to: YFCCQLHTQSNTPSFTNQVDREV*STAPCL
Trigger: GAGACACGGCGCCGTACTTCAGACCTCCCGGTCTAC...CTGATTGGTAAAGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp TATTACAATAACCAGGTCAGCAGTGTGACTTCAACACAGAGCAGTTTACTCACCGTAGACCGGGAGGTCTaGAGTACGGCGCCGTGTCTC +
Preference number: 4 (lower is better)
Translates to: YYNNQVSSVTSTQSSLLTVDREV*STAPCL
Trigger: GAGACACGGCGCCGTACTTCAGACCTCCCGGTCTAC...GGTGAGTAAACTGCTCTGTGTTGAAGTCACACTGCTGACCTGGTTATTGTAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp TTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTAAACCACTTTCCTGGTaGGGCCCCGGCCTCCGTCGA +
Preference number: 4 (lower is better)
Translates to: FTSAFMASNNCVCQHMDPKPLSW*GPGLRR
Trigger: TCGACGGAGGCCGGGGCCTCACCAGGAAAGTGGTTT...AGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392901.10
CDS-3UTR GCA 90 bp TGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCTTTAATTAAAATCTTAATGCCAGCCTGTGGCTaGCGGCGCGGCAGGACGCGC +
Preference number: 4 (lower is better)
Translates to: CLRPAHIQKGASALIKILMPACG*RRGRTR
Trigger: GCGCGTCCTGCCGCGCCGGCAGCCACAGGCTGGCAT...TAAGATTTTAATTAAAGCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260777.14
CDS-3UTR GCA 90 bp ACTCAGGGCAAACTATGCTGGGTGCTAATAGCCCTGTTGATGCCTGCCAGTCAGTTTTCCTGCATCCAATaGTACTGGGAGGCTGAAACG +
Preference number: 4 (lower is better)
Translates to: TQGKLCWVLIALLMPASQFSCIQ*YWEAET
Trigger: CGTTTCAGCCTCCCAGTAGCATTGGATGCAGGAAAA...CTGACTGGCAGGCATCAACAGGGCTATTAGCACCCAGCATAGTTTGCCCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000355371.9
CDS-3UTR GCA 90 bp AGCCAAAGCATCCATCCTCCGTACTCAGGGCAAACTATGCTGGGTGCTAATAGCCCTAGAAGCTCTCTGTaGTGGGAACAGATGTCCATC +
Preference number: 4 (lower is better)
Translates to: SQSIHPPYSGQTMLGANSPRSSL*WEQMSI
Trigger: GATGGACATCTGTTCCCAGCACAGAGAGCTTCTAGG...GCTATTAGCACCCAGCATAGTTTGCCCTGAGTACGGAGGATGGATGCTTTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp TGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCAATGGGCTGCGTGAGGTaGCGGGTCCAGGCTCACAGG +
Preference number: 4 (lower is better)
Translates to: WHLTTVSVNTWILFTVNSMGCVR*RVQAHR
Trigger: CCTGTGAGCCTGGACCCGGCACCTCACGCAGCCCAT...TGAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392901.10
CDS-3UTR CCA 90 bp TCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGGACTCGCTATGCCAGCCTGTaGCTGCCGGCGCGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: STALANITTLIMCLLKRTRYASL*LPARQD
Trigger: GTCCTGCCGCGCCGGCAGCCACAGGCTGGCATAGCG...AGTCCTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260777.14
CDS-3UTR CCA 90 bp TCCTATTTGGGATCCCTTGCTTTGGTTGACAGTGTCACCCCAGCCAGGGGCAAACTGCTGAAACTGCTGTaGGTGAGGACTTTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: SYLGSLALVDSVTPARGKLLKLL*VRTLFE
Trigger: CTCAAACAAAGTCCTCACCCACAGCAGTTTCAGCAG...TTTGCCCCTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp AGCCAAAGCATCCATCCTCCGTACTCAGGGCAAACTATGCTGGGTGCTAATAGCCAGGGCAAACTATGCTaGGTGCTAATAGCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: SQSIHPPYSGQTMLGANSQGKLC*VLIALL
Trigger: CAACAGGGCTATTAGCACCCAGCATAGTTTGCCCTG...GCTATTAGCACCCAGCATAGTTTGCCCTGAGTACGGAGGATGGATGCTTTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp CTGTGGGTGAGGACTTTGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCAACAGGAGCATCCTCTaGATAGGGCTGTACACACCC +
Preference number: 4 (lower is better)
Translates to: LWVRTLFETSSHTKGCKCNRSIL*IGLYTP
Trigger: GGGTGTGTACAGCCCTATCCAGAGGATGCTCCTGTT...GCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACAAAGTCCTCACCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp ACAGCAGTGAAGCAAGAAAAATGTGTGCTTGTCACTTATCTTCACCATACTGTACGGCTAGGGAGCCGCTaGTGCCCACCTTCCCCACAC +
Preference number: 4 (lower is better)
Translates to: TAVKQEKCVLVTYLHHTVRLGSR*CPPSPH
Trigger: GTGTGGGGAAGGTGGGCACCAGCGGCTCCCTAGCCG...TACAGTATGGTGAAGATAAGTGACAAGCACACATTTTTCTTGCTTCACTGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR CAA 72 bp ACTCAGGGCAAACTATGCTGGGTGCTAATAGCCCTGTaGATGCCTGCCAGTCAGAACTTCCATGGGACTGTT +
Preference number: 4 (lower is better)
Translates to: TQGKLCWVLIAL*MPASQNFHGTV
Trigger: AACAGTCCCATGGAAGTTCTGACTGGCAGGCATCAACAGGGCTATTAGCACCCAGCATAGTTTGCCCTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp AGCCGAAACAGGAGCATCCTCTGGATAGGGCTGTACACACCCCAGGTTCCAGCCTCTTTAATTTGCTTCTaGCACTGTACTGAGACACAA +
Preference number: 4 (lower is better)
Translates to: SRNRSILWIGLYTPQVPASLICF*HCTETQ
Trigger: TTGTGTCTCAGTACAGTGTCAGAAGCAAATTAAAGA...GGCTGGAACCTGGGGTGTGTACAGCCCTATCCAGAGGATGCTCCTGTTTCGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp AGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTCTTCAAGTTGCTGGGTaGGTTTTGCATTTTCGTCTA +
Preference number: 4 (lower is better)
Translates to: SHTISISRPGGLKYGAVSLQVAG*VLHFRL
Trigger: TAGACGAAAATGCAAAACTCACCCAGCAACTTGAAG...AGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp CTGTGGGTGAGGACTTTGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCAGGTGGTGGAGGTACTaGATTCTCAGACTGGTTCAC +
Preference number: 4 (lower is better)
Translates to: LWVRTLFETSSHTKGCKCRWWRY*ILRLVH
Trigger: GTGAACCAGTCTGAGAATTCAGTACCTCCACCACCT...GCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACAAAGTCCTCACCCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp AGCCAAAGCATCCATCCTCCGTACTCAGGGCAAACTATGCTGGGTGCTAATAGCATGGGACTACGAGTTTaGTGCCAGCTCCTGAGTTTT +
Preference number: 4 (lower is better)
Translates to: SQSIHPPYSGQTMLGANSMGLRV*CQLLSF
Trigger: AAAACTCAGGAGCTGGCATCAAACTCGTAGTCCCAT...GCTATTAGCACCCAGCATAGTTTGCCCTGAGTACGGAGGATGGATGCTTTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp ACTCAGGGCAAACTATGCTGGGTGCTAATAGCCCTGTTGATGCCTGCCAGTCAGTCTTTTGCCCTTAGGTaGAAAACACCTGACAGCTAC +
Preference number: 4 (lower is better)
Translates to: TQGKLCWVLIALLMPASQSFALR*KTPDSY
Trigger: GTAGCTGTCAGGTGTTTTTCACCTAAGGGCAAAAGA...CTGACTGGCAGGCATCAACAGGGCTATTAGCACCCAGCATAGTTTGCCCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp TGTTGTTCCACAACGAGTGTAACTGAACAGGTAGAGTATGCATTTAGAAAAATAGGTCGGCAGCCGCTATaGCAGCCTGTGGCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: CCSTTSVTEQVEYAFRKIGRQPL*QPVAAG
Trigger: GCCGGCAGCCACAGGCTGGCATAGCGGCTGCCGACC...TATTTTTCTAAATGCATACTCTACCTGTTCAGTTACACTCGTTGTGGAACAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260777.14
CDS-3UTR GCA 90 bp ACTCAGGGCAAACTATGCTGGGTGCTAATAGCCCTGTTGATGCCTGCCAGTCAGCTGCTGTCACCTTTCTaGGACGCAAAATCCTTTCTA +
Preference number: 4 (lower is better)
Translates to: TQGKLCWVLIALLMPASQLLSPF*DAKSFL
Trigger: TAGAAAGGATTTTGCGTCGCAGAAAGGTGACAGCAG...CTGACTGGCAGGCATCAACAGGGCTATTAGCACCCAGCATAGTTTGCCCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000355371.9
CDS-3UTR GCA 90 bp AGCATCCCCACGGAGGTCCTCGGGAGGCTTTGGACACAATCAATAGCATGTATTCCACTCCAATCCTTATaGAGGGACTGCTTGATGAGT +
Preference number: 4 (lower is better)
Translates to: SIPTEVLGRLWTQSIACIPLQSL*RDCLMS
Trigger: ACTCATCAAGCAGTCCCTGCATAAGGATTGGAGTGG...AATACATGCTATTGATTGTGTCCAAAGCCTCCCGAGGACCTCCGTGGGGATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp TTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAACTGTGGGAGATGGGCTaGGTGAGGTGCCGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: FMASNNCVCQHMDPFHCQLWEMG*VRCRVQ
Trigger: CTGGACCCGGCACCTCACGCAGCCCATCTCCCACAG...TTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392901.10
CDS-3UTR CCA 90 bp TGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCAGTGGGAACTCCACTTTaGACGCTTCCCGGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: WHLTTVSVNTWILFTVNSVGTPL*TLPGGR
Trigger: GCGACCCCCGGGAAGCGTCCAAAGTGGAGTTCCCAC...TGAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392903.3
CDS-3UTR CCA 90 bp ATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCCCACTACCCGGAAGTTaGATCCGCTCCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: MASNNCVCQHMDPFHCQFPLPGS*IRSRSS
Trigger: GGAGGAGCGGGAGCGGATCCAACTTCCGGGTAGTGG...GAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392903.3
CDS-3UTR CCA 90 bp CAGCCACCACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGTCCATTAAAGCAAGATGCCGGTaGCTTGCGGCTCCACTACCC +
Preference number: 4 (lower is better)
Translates to: QPPHFHVDFVCLLALLSIKARCR*LAAPLP
Trigger: GGGTAGTGGAGCCGCAAGCCACCGGCATCTTGCTTT...AATGGACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGGTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp CAGCCACCACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGTCCATTGATAGGATTGGGAGGTaGAGGGGGAAGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: QPPHFHVDFVCLLALLSIDRIGR*RGKWWW
Trigger: CCACCACCACTTCCCCCTCCACCTCCCAATCCTATC...AATGGACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGGTGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp CAGCCACCACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGTCCATTCCACTGCCACTGGGGTaGGATCGTTTCCGGATCATG +
Preference number: 4 (lower is better)
Translates to: QPPHFHVDFVCLLALLSIPLPLG*DRFRIM
Trigger: CATGATCCGGAAACGATCCCACCCCAGTGGCAGTGG...AATGGACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGGTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp AGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTAACATGTCAGGCTTCTaGTTTATGGATCAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: SHTISISRPGGLKYGAVSNMSGF*FMDQQL
Trigger: CAACTGCTGATCCATAAACCAGAAGCCTGACATGTT...AGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp CTGTGGGTGAGGACTTTGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCCAGGGCAAACTATGCTaGGTGCTAATAGCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: LWVRTLFETSSHTKGCKCQGKLC*VLIALL
Trigger: CAACAGGGCTATTAGCACCCAGCATAGTTTGCCCTG...GCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACAAAGTCCTCACCCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCATCTAGCCCTAGCACCTaGCCCTCGCCTCGCCTCCTA +
Preference number: 4 (lower is better)
Translates to: WHLTTVSVNTWILFTVNSSSPST*PSPRLL
Trigger: TAGGAGGCGAGGCGAGGGCCAGGTGCTAGGGCTAGA...TGAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392901.10
CDS-3UTR CCA 90 bp ATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCCGTCGACGGAAGCTGTaGGAGATGGGCTGCGTGAGG +
Preference number: 4 (lower is better)
Translates to: MASNNCVCQHMDPFHCQFRRRKL*EMGCVR
Trigger: CCTCACGCAGCCCATCTCCCACAGCTTCCGTCGACG...GAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392901.10
CDS-3UTR TCA 90 bp AATGTCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGCGCGGAGCGCGCGAGTaGGATCATCCCCACGCACCT +
Preference number: 4 (lower is better)
Translates to: NVYSPCQYNNTNHVLIEKRGARE*DHPHAP
Trigger: AGGTGCGTGGGGATGATCTCACTCGCGCGCTCCGCG...CTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000615301.4
CDS-3UTR TCA 90 bp AGCCAAAGCATCCATCCTCCGTACTCAGGGCAAACTATGCTGGGTGCTAATAGCCTACGAGTTTGCTCTTaGGATTTTCCAGCTCAATGG +
Preference number: 4 (lower is better)
Translates to: SQSIHPPYSGQTMLGANSLRVCS*DFPAQW
Trigger: CCATTGAGCTGGAAAATCTCAAGAGCAAACTCGTAG...GCTATTAGCACCCAGCATAGTTTGCCCTGAGTACGGAGGATGGATGCTTTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp TCCTATTTGGGATCCCTTGCTTTGGTTGACAGTGTCACCCCAGCCAGGGGCAAATCTTTGTTTTCTGGTTaGATTTCGCCTTCATCCTCC +
Preference number: 4 (lower is better)
Translates to: SYLGSLALVDSVTPARGKSLFSG*ISPSSS
Trigger: GGAGGATGAAGGCGAAATTCAACCAGAAAACAAAGA...TTTGCCCCTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp AGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTTGCTACTTACAAAAGTaGCACCAGAAAAGAACCTGT +
Preference number: 4 (lower is better)
Translates to: SHTISISRPGGLKYGAVSCYLQK*HQKRTC
Trigger: ACAGGTTCTTTTCTGGTGTCACTTTTGTAAGTAGCA...AGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp ATGTCTTCCTATTTGGGATCCCTTGCTTTGGTTGACAGTGTCACCCCAGCCAGGCTGACAGCTACATGCTaGGCCATGCTAACAAAACTA +
Preference number: 4 (lower is better)
Translates to: MSSYLGSLALVDSVTPARLTATC*AMLTKL
Trigger: TAGTTTTGTTAGCATGGCTCAGCATGTAGCTGTCAG...CCTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGAAGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp AGCCAAAGCATCCATCCTCCGTACTCAGGGCAAACTATGCTGGGTGCTAATAGCATTCCTAAATGTGTGTaGGTTGCATGCTGGCAGACA +
Preference number: 4 (lower is better)
Translates to: SQSIHPPYSGQTMLGANSIPKCV*VACWQT
Trigger: TGTCTGCCAGCATGCAACTCACACACATTTAGGAAT...GCTATTAGCACCCAGCATAGTTTGCCCTGAGTACGGAGGATGGATGCTTTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp ATGTCTTCCTATTTGGGATCCCTTGCTTTGGTTGACAGTGTCACCCCAGCCAGGATTCCTAAATGTGTGTaGGTTGCATGCTGGCAGACA +
Preference number: 4 (lower is better)
Translates to: MSSYLGSLALVDSVTPARIPKCV*VACWQT
Trigger: TGTCTGCCAGCATGCAACTCACACACATTTAGGAAT...CCTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGAAGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp AGCCAAAGCATCCATCCTCCGTACTCAGGGCAAACTATGCTGGGTGCTAATAGCGGTGAGGACTTTGTTTaGGACCAGCTCACATACAAA +
Preference number: 4 (lower is better)
Translates to: SQSIHPPYSGQTMLGANSGEDFV*DQLTYK
Trigger: TTTGTATGTGAGCTGGTCTCAAACAAAGTCCTCACC...GCTATTAGCACCCAGCATAGTTTGCCCTGAGTACGGAGGATGGATGCTTTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp ATGTCTTCCTATTTGGGATCCCTTGCTTTGGTTGACAGTGTCACCCCAGCCAGGGGTGAGGACTTTGTTTaGGACCAGCTCACATACAAA +
Preference number: 4 (lower is better)
Translates to: MSSYLGSLALVDSVTPARGEDFV*DQLTYK
Trigger: TTTGTATGTGAGCTGGTCTCAAACAAAGTCCTCACC...CCTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGAAGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp ACTCAGGGCAAACTATGCTGGGTGCTAATAGCCCTGTTGATGCCTGCCAGTCAGCACAACGAGTGTAACTaGACAGGTAGAGTATGCATT +
Preference number: 4 (lower is better)
Translates to: TQGKLCWVLIALLMPASQHNECN*TGRVCI
Trigger: AATGCATACTCTACCTGTTCAGTTACACTCGTTGTG...CTGACTGGCAGGCATCAACAGGGCTATTAGCACCCAGCATAGTTTGCCCTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp AATGTCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGCACCTACTCGGCGGCTaGGGCCGCTTCACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: NVYSPCQYNNTNHVLIEKHLLGG*GRFTCR
Trigger: CCTGCAGGTGAAGCGGCCGCAGCCGCCGAGTAGGTG...CTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000615301.4
CDS-3UTR GCA 90 bp TCCTATTTGGGATCCCTTGCTTTGGTTGACAGTGTCACCCCAGCCAGGGGCAAAAGCTCCAGGTTTACTTaGATCTCCTCATACTCTTCT +
Preference number: 4 (lower is better)
Translates to: SYLGSLALVDSVTPARGKSSRFT*ISSYSS
Trigger: AGAAGAGTATGAGGAGATGCAAGTAAACCTGGAGCT...TTTGCCCCTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp AGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTTGTTTCTGGTTGAGTTaGCTTTTCTTTCTTAGCACC +
Preference number: 4 (lower is better)
Translates to: SHTISISRPGGLKYGAVSCFWLS*LFFLST
Trigger: GGTGCTAAGAAAGAAAAGGCAACTCAACCAGAAACA...AGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp ACTCAGGGCAAACTATGCTGGGTGCTAATAGCCCTGTTGATGCCTGCCAGTCAGCAACAATTTCCATGCTaGTGCAGTTTCTCCATCAAG +
Preference number: 4 (lower is better)
Translates to: TQGKLCWVLIALLMPASQQQFPC*CSFSIK
Trigger: CTTGATGGAGAAACTGCAGCAGCATGGAAATTGTTG...CTGACTGGCAGGCATCAACAGGGCTATTAGCACCCAGCATAGTTTGCCCTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp AGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTGCTATGAACATACCTTaGAGATATAAGCACGGTTCT +
Preference number: 4 (lower is better)
Translates to: SHTISISRPGGLKYGAVSAMNIP*RYKHGS
Trigger: AGAACCGTGCTTATATCTGCAAGGTATGTTCATAGC...AGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp AGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTGCTTCATCTCGTTCTTaGCTAATTTTGTCACACTTC +
Preference number: 4 (lower is better)
Translates to: SHTISISRPGGLKYGAVSASSRS*LILSHF
Trigger: GAAGTGTGACAAAATTAGGCAAGAACGAGATGAAGC...AGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp ACTCAGGGCAAACTATGCTGGGTGCTAATAGCCCTGTTGATGCCTGCCAGTCAGGGCCAATATTTTTGTTaGCAACTCCACACTCAGTCA +
Preference number: 4 (lower is better)
Translates to: TQGKLCWVLIALLMPASQGQYFC*QLHTQS
Trigger: TGACTGAGTGTGGAGTTGGCAACAAAAATATTGGCC...CTGACTGGCAGGCATCAACAGGGCTATTAGCACCCAGCATAGTTTGCCCTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp TGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCACTAGAGCGCCAGCCCTaGCTCCTTTCTAGCCCTAGC +
Preference number: 4 (lower is better)
Translates to: WHLTTVSVNTWILFTVNSLERQP*LLSSPS
Trigger: GCTAGGGCTAGAAAGGAGGCAGGGCTGGCGCTCTAG...TGAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392901.10
CDS-3UTR CCA 90 bp TTCTTTAATAGCAATGGCACAAAGTACCTCTATCTCTGTTCCTCACTCGGGCTAAAAGCAAGATGCCGGTaGCTTGCGGCTCCACTACCC +
Preference number: 4 (lower is better)
Translates to: FFNSNGTKYLYLCSSLGLKARCR*LAAPLP
Trigger: GGGTAGTGGAGCCGCAAGCCACCGGCATCTTGCTTT...TAGCCCGAGTGAGGAACAGAGATAGAGGTACTTTGTGCCATTGCTATTAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TTGAGCTTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGAAAGCAAGATGCCGGTaGCTTGCGGCTCCACTACCC +
Preference number: 4 (lower is better)
Translates to: LSFTSAFMASNNCVCQHMKARCR*LAAPLP
Trigger: GGGTAGTGGAGCCGCAAGCCACCGGCATCTTGCTTT...CATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAAGCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392903.3
CDS-3UTR CCA 90 bp ATACCTGTTACTAATTGTTCCCTAGTCCAGCTAACACATTTCACCCAAAGGGCACCGAGCTGTTCATTTTaGCGGGTGGGGCCGGGAATA +
Preference number: 4 (lower is better)
Translates to: IPVTNCSLVQLTHFTQRAPSCSF*RVGPGI
Trigger: TATTCCCGGCCCCACCCGCCAAAATGAACAGCTCGG...TGCCCTTTGGGTGAAATGTGTTAGCTGGACTAGGGAACAATTAGTAACAGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTCCGAGCTGTTCATTTTaGCGGGTGGGGCCGGGAATA +
Preference number: 4 (lower is better)
Translates to: FTSAFMASNNCVCQHMDPPSCSF*RVGPGI
Trigger: TATTCCCGGCCCCACCCGCCAAAATGAACAGCTCGG...AGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392903.3
CDS-3UTR CCA 90 bp TCCTATTTGGGATCCCTTGCTTTGGTTGACAGTGTCACCCCAGCCAGGGGCAAAACTGAATTCTCAGACTaGTTCACTCGTTTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: SYLGSLALVDSVTPARGKTEFSD*FTRFWS
Trigger: ACTCCAGAAACGAGTGAACCAGTCTGAGAATTCAGT...TTTGCCCCTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TCCTATTTGGGATCCCTTGCTTTGGTTGACAGTGTCACCCCAGCCAGGGGCAAACTCCTTGTGTTGAGTTaGATCTTTTTCAGCAACCTG +
Preference number: 4 (lower is better)
Translates to: SYLGSLALVDSVTPARGKLLVLS*IFFSNL
Trigger: CAGGTTGCTGAAAAAGATCCAACTCAACACAAGGAG...TTTGCCCCTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp AGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTATAGCACAGAGCACATaGTTTACCAACTTACTACTG +
Preference number: 4 (lower is better)
Translates to: SHTISISRPGGLKYGAVSIAQST*FTNLLL
Trigger: CAGTAGTAAGTTGGTAAACCATGTGCTCTGTGCTAT...AGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TCCTATTTGGGATCCCTTGCTTTGGTTGACAGTGTCACCCCAGCCAGGGGCAAACTATGTCTTCCTATTTaGGATCCCTTGCTTTGGTTG +
Preference number: 4 (lower is better)
Translates to: SYLGSLALVDSVTPARGKLCLPI*DPLLWL
Trigger: CAACCAAAGCAAGGGATCCCAAATAGGAAGACATAG...TTTGCCCCTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp CTGTGGGTGAGGACTTTGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCCAGTCAGAACTTCCATaGGACTGTTCAGCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: LWVRTLFETSSHTKGCKCQSELP*DCSAAE
Trigger: TTCAGCAGCTGAACAGTCCCATGGAAGTTCTGACTG...GCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACAAAGTCCTCACCCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp AGCCAAAGCATCCATCCTCCGTACTCAGGGCAAACTATGCTGGGTGCTAATAGCGCTCCAGTTGCTGTTTaGGGTTGTGTATTTCTTTGT +
Preference number: 4 (lower is better)
Translates to: SQSIHPPYSGQTMLGANSAPVAV*GCVFLC
Trigger: ACAAAGAAATACACAACCTCAAACAGCAACTGGAGC...GCTATTAGCACCCAGCATAGTTTGCCCTGAGTACGGAGGATGGATGCTTTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp CTGTGGGTGAGGACTTTGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCTCTTTTGCCCTTAGGTaGAAAACACCTGACAGCTAC +
Preference number: 4 (lower is better)
Translates to: LWVRTLFETSSHTKGCKCSFALR*KTPDSY
Trigger: GTAGCTGTCAGGTGTTTTTCACCTAAGGGCAAAAGA...GCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACAAAGTCCTCACCCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp ATACCTGTTACTAATTGTTCCCTAGTCCAGCTAACACATTTCACCCAAAGGGCAATCCCTTGCTTTGGTTaGCAGTGTCACCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: IPVTNCSLVQLTHFTQRAIPCFG*QCHPSQ
Trigger: CTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGAT...TGCCCTTTGGGTGAAATGTGTTAGCTGGACTAGGGAACAATTAGTAACAGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp ATGTCTTCCTATTTGGGATCCCTTGCTTTGGTTGACAGTGTCACCCCAGCCAGGAGGAGCAATTATTGGTaGGTAGTTAGAGCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: MSSYLGSLALVDSVTPARRSNYW*VVRAKA
Trigger: TGCTTTGGCTCTAACTACTCACCAATAATTGCTCCT...CCTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGAAGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp TTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAAAAGATGCCGGTGGCTTaGGGCTCCACTACCCGGAAG +
Preference number: 4 (lower is better)
Translates to: FMASNNCVCQHMDPFHCQKMPVA*GSTTRK
Trigger: CTTCCGGGTAGTGGAGCCGCAAGCCACCGGCATCTT...TTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392903.3
CDS-3UTR GCA 90 bp ACAGCAGTGAAGCAAGAAAAATGTGTGCTTGTCACTTATCTTCACCATACTGTAAAGATGCCGGTGGCTTaGGGCTCCACTACCCGGAAG +
Preference number: 4 (lower is better)
Translates to: TAVKQEKCVLVTYLHHTVKMPVA*GSTTRK
Trigger: CTTCCGGGTAGTGGAGCCGCAAGCCACCGGCATCTT...TACAGTATGGTGAAGATAAGTGACAAGCACACATTTTTCTTGCTTCACTGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000615301.4
CDS-3UTR GCA 90 bp AGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTCTCTCACGTTTTCAATaGTGTCTTCTTTGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: SHTISISRPGGLKYGAVSLSRFQ*CLLCFL
Trigger: CAGAAAACAAAGAAGACAGCATTGAAAACGTGAGAG...AGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp ACTCAGGGCAAACTATGCTGGGTGCTAATAGCCCTGTTGATGCCTGCCAGTCAGATCCATTGCCTGAATTaGTCTTTTGTAAGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: TQGKLCWVLIALLMPASQIHCLN*SFVSQC
Trigger: ACACTGGCTTACAAAAGAGCAATTCAGGCAATGGAT...CTGACTGGCAGGCATCAACAGGGCTATTAGCACCCAGCATAGTTTGCCCTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGGACTCCACTACCCGGAAGTTaGATCCGCTCCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: STALANITTLIMCLLKRTPLPGS*IRSRSS
Trigger: GGAGGAGCGGGAGCGGATCCAACTTCCGGGTAGTGG...AGTCCTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000615301.4
CDS-3UTR CCA 90 bp AGCAGGACGTATGTAAGTTTTGTGTGTGCAATAGCTATGAACATACCTTGCAGACCGAGCTGTTCATTTTaGCGGGTGGGGCCGGGAATA +
Preference number: 4 (lower is better)
Translates to: SRTYVSFVCAIAMNIPCRPSCSF*RVGPGI
Trigger: TATTCCCGGCCCCACCCGCCAAAATGAACAGCTCGG...TCTGCAAGGTATGTTCATAGCTATTGCACACACAAAACTTACATACGTCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTGCTGCTGATCAGGGATaGAGCTCTGCAGCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: FTSAFMASNNCVCQHMDPAADQG*SSAAEG
Trigger: ACCTTCTGCTGCAGAGCTCCATCCCTGATCAGCAGC...AGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CCA 90 bp TTAATAGCAATGGCACAAAGTACCTCTATCTCTGTTCCTCACTCGGGCTATAAAGATAGGATTGGGAGGTaGAGGGGGAAGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LIAMAQSTSISVPHSGYKDRIGR*RGKWWW
Trigger: CCACCACCACTTCCCCCTCCACCTCCCAATCCTATC...TTTATAGCCCGAGTGAGGAACAGAGATAGAGGTACTTTGTGCCATTGCTATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp ATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCGATAGGATTGGGAGGTaGAGGGGGAAGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: MASNNCVCQHMDPFHCQFDRIGR*RGKWWW
Trigger: CCACCACCACTTCCCCCTCCACCTCCCAATCCTATC...GAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CCA 90 bp ATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCCCACTGCCACTGGGGTaGGATCGTTTCCGGATCATG +
Preference number: 4 (lower is better)
Translates to: MASNNCVCQHMDPFHCQFPLPLG*DRFRIM
Trigger: CATGATCCGGAAACGATCCCACCCCAGTGGCAGTGG...GAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CCA 90 bp AGCCAAAGCATCCATCCTCCGTACTCAGGGCAAACTATGCTGGGTGCTAATAGCTCTTTTTCAGCAACCTaGTCTTTGGTTTGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: SQSIHPPYSGQTMLGANSSFSAT*SLVWGS
Trigger: TGAACCCCAAACCAAAGACCAGGTTGCTGAAAAAGA...GCTATTAGCACCCAGCATAGTTTGCCCTGAGTACGGAGGATGGATGCTTTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp ACTCAGGGCAAACTATGCTGGGTGCTAATAGCCCTGTTGATGCCTGCCAGTCAGATAGCACAGAGCACATaGTTTACCAACTTACTACTG +
Preference number: 4 (lower is better)
Translates to: TQGKLCWVLIALLMPASQIAQST*FTNLLL
Trigger: CAGTAGTAAGTTGGTAAACCATGTGCTCTGTGCTAT...CTGACTGGCAGGCATCAACAGGGCTATTAGCACCCAGCATAGTTTGCCCTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TCCTATTTGGGATCCCTTGCTTTGGTTGACAGTGTCACCCCAGCCAGGGGCAAAAGGGTCTCGTTAAAATaGTTACCATTTGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SYLGSLALVDSVTPARGKRVSLK*LPFASP
Trigger: AGGAGAAGCAAATGGTAACCATTTTAACGAGACCCT...TTTGCCCCTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp CTGTGGGTGAGGACTTTGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCCTTCAAGTTGCTGGGTaGGTTTTGCATTTTCGTCTA +
Preference number: 4 (lower is better)
Translates to: LWVRTLFETSSHTKGCKCLQVAG*VLHFRL
Trigger: TAGACGAAAATGCAAAACTCACCCAGCAACTTGAAG...GCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACAAAGTCCTCACCCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp CTGTGGGTGAGGACTTTGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCTCATCCTCCTTGTGTTaGGTTGGATCTTTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LWVRTLFETSSHTKGCKCSSSLC*VGSFSA
Trigger: TGCTGAAAAAGATCCAACTCAACACAAGGAGGATGA...GCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACAAAGTCCTCACCCACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp ATGTCTTCCTATTTGGGATCCCTTGCTTTGGTTGACAGTGTCACCCCAGCCAGGTGTGCTGAAAAGCACTaGCACATTTTTGTAACCAAC +
Preference number: 4 (lower is better)
Translates to: MSSYLGSLALVDSVTPARCAEKH*HIFVTN
Trigger: GTTGGTTACAAAAATGTGTCAGTGCTTTTCAGCACA...CCTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGAAGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp AGCCAAAGCATCCATCCTCCGTACTCAGGGCAAACTATGCTGGGTGCTAATAGCTGTGCTGAAAAGCACTaGCACATTTTTGTAACCAAC +
Preference number: 4 (lower is better)
Translates to: SQSIHPPYSGQTMLGANSCAEKH*HIFVTN
Trigger: GTTGGTTACAAAAATGTGTCAGTGCTTTTCAGCACA...GCTATTAGCACCCAGCATAGTTTGCCCTGAGTACGGAGGATGGATGCTTTGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp AGCATCCCCACGGAGGTCCTCGGGAGGCTTTGGACACAATCAATAGCATGTATTTCTACATGTCTGTGCTaGAAAGCACTGACACATTTT +
Preference number: 4 (lower is better)
Translates to: SIPTEVLGRLWTQSIACISTCLC*KALTHF
Trigger: AAAATGTGTCAGTGCTTTTCAGCACAGACATGTAGA...AATACATGCTATTGATTGTGTCCAAAGCCTCCCGAGGACCTCCGTGGGGATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp GTTTTCAGTTTATCTCAGTCTACTGTAGAAAATAACTTGTATGCCACAGTACCCAAGATGCCGGTGGCTTaGGGCTCCACTACCCGGAAG +
Preference number: 4 (lower is better)
Translates to: VFSLSQSTVENNLYATVPKMPVA*GSTTRK
Trigger: CTTCCGGGTAGTGGAGCCGCAAGCCACCGGCATCTT...GGGTACTGTGGCATACAAGTTATTTTCTACAGTAGACTGAGATAAACTGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000615301.4
CDS-3UTR GCA 90 bp AGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTTGTAAGTTTTGTGTGTaGAATAGCTATGAACATACC +
Preference number: 4 (lower is better)
Translates to: SHTISISRPGGLKYGAVSCKFCV*NSYEHT
Trigger: GGTATGTTCATAGCTATTGCACACACAAAACTTACA...AGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp AGCATCCCCACGGAGGTCCTCGGGAGGCTTTGGACACAATCAATAGCATGTATTGCTTCATCTCGTTCTTaGCTAATTTTGTCACACTTC +
Preference number: 4 (lower is better)
Translates to: SIPTEVLGRLWTQSIACIASSRS*LILSHF
Trigger: GAAGTGTGACAAAATTAGGCAAGAACGAGATGAAGC...AATACATGCTATTGATTGTGTCCAAAGCCTCCCGAGGACCTCCGTGGGGATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp CTGTGGGTGAGGACTTTGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCACCTATCCTCGAGACTaGACTCACCAATGGATAATT +
Preference number: 4 (lower is better)
Translates to: LWVRTLFETSSHTKGCKCTYPRD*THQWII
Trigger: AATTATCCATTGGTGAGTGCAGTCTCGAGGATAGGT...GCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACAAAGTCCTCACCCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp CTGTGGGTGAGGACTTTGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCGGCCAATATTTTTGTTaGCAACTCCACACTCAGTCA +
Preference number: 4 (lower is better)
Translates to: LWVRTLFETSSHTKGCKCGQYFC*QLHTQS
Trigger: TGACTGAGTGTGGAGTTGGCAACAAAAATATTGGCC...GCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACAAAGTCCTCACCCACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAAGGTTCGCAGCGTGTGTaGGAACTCCACTTTGGACGC +
Preference number: 4 (lower is better)
Translates to: FMASNNCVCQHMDPFHCQGSQRV*ELHFGR
Trigger: GCGTCCAAAGTGGAGTTCCCACACACGCTGCGAACC...TTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392903.3
CDS-3UTR CCA 90 bp GTACCTCTATCTCTGTTCCTCACTCGGGCTATAAAATGCATCAACATTCGTTTTGCTGCTGATCAGGGATaGAGCTCTGCAGCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: VPLSLFLTRAIKCINIRFAADQG*SSAAEG
Trigger: ACCTTCTGCTGCAGAGCTCCATCCCTGATCAGCAGC...AAAACGAATGTTGATGCATTTTATAGCCCGAGTGAGGAACAGAGATAGAGGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAAGATAGGATTGGGAGGTaGAGGGGGAAGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: FMASNNCVCQHMDPFHCQDRIGR*RGKWWW
Trigger: CCACCACCACTTCCCCCTCCACCTCCCAATCCTATC...TTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CCA 90 bp CTGTGGGTGAGGACTTTGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCACCTGGTCTTTGGTTTaGGGTTCATGTGTAGAAACA +
Preference number: 4 (lower is better)
Translates to: LWVRTLFETSSHTKGCKCTWSLV*GSCVET
Trigger: TGTTTCTACACATGAACCCCAAACCAAAGACCAGGT...GCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACAAAGTCCTCACCCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp CTGTGGGTGAGGACTTTGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCAACATGTCAGGCTTCTaGTTTATGGATCAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: LWVRTLFETSSHTKGCKCNMSGF*FMDQQL
Trigger: CAACTGCTGATCCATAAACCAGAAGCCTGACATGTT...GCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACAAAGTCCTCACCCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCTTTACCAATCAGCTGTGTCACAGTTTGTaGCTGCTACTGCCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: YFCCQLHTQSNTPSFTNQLCHSL*LLLPLL
Trigger: CAGGAGAGGCAGTAGCAGCCACAAACTGTGACACAG...CTGATTGGTAAAGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR CAA 72 bp TGGTATCACTCTAAGTTGGAAGAACTGTGTCACAGTTaGTGGCTGCTACTGCCTCTCCTGATGCTTAGCAAC +
Preference number: 4 (lower is better)
Translates to: WYHSKLEELCHS*WLLLPLLMLSN
Trigger: GTTGCTAAGCATCAGGAGAGGCAGTAGCAGCCACAAACTGTGACACAGTTCTTCCAACTTAGAGTGATACCA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp ACAGCAGTGAAGCAAGAAAAATGTGTGCTTGTCACTTATCTTCACCATACTGTACTTCTGACACTGTACTaGGACACAAGTCTCGGCGGC +
Preference number: 4 (lower is better)
Translates to: TAVKQEKCVLVTYLHHTVLLTLY*DTSLGG
Trigger: GCCGCCGAGACTTGTGTCTCAGTACAGTGTCAGAAG...TACAGTATGGTGAAGATAAGTGACAAGCACACATTTTTCTTGCTTCACTGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp TGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCAGCTTTCAAAAGCTGCTaGTCAGGGATGGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: WHLTTVSVNTWILFTVNSAFKSC*SGMELC
Trigger: GCAGAGCTCCATCCCTGATCAGCAGCTTTTGAAAGC...TGAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR TCA 90 bp AGCCAAAGCATCCATCCTCCGTACTCAGGGCAAACTATGCTGGGTGCTAATAGCGCTCTTCTAATTCTTTaGCCTTTTGTTGATGCTGAA +
Preference number: 4 (lower is better)
Translates to: SQSIHPPYSGQTMLGANSALLIL*PFVDAE
Trigger: TTCAGCATCAACAAAAGGTCAAAGAATTAGAAGAGC...GCTATTAGCACCCAGCATAGTTTGCCCTGAGTACGGAGGATGGATGCTTTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp TATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCTTTACCAATCAGAGGTGGTGGAGGTACTaGATTCTCAGACTGGTTCAC +
Preference number: 4 (lower is better)
Translates to: YFCCQLHTQSNTPSFTNQRWWRY*ILRLVH
Trigger: GTGAACCAGTCTGAGAATTCAGTACCTCCACCACCT...CTGATTGGTAAAGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp CTTCCAAACATGTCAGGCTTCTGGTTTATGGATCAGCAGTTGGAGCTGTCTGTCAGGAGCAATTATTGGTaGGTAGTTAGAGCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: LPNMSGFWFMDQQLELSVRSNYW*VVRAKA
Trigger: TGCTTTGGCTCTAACTACTCACCAATAATTGCTCCT...GACAGACAGCTCCAACTGCTGATCCATAAACCAGAAGCCTGACATGTTTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615301.4
CDS-3UTR GCA 90 bp CTGTGGGTGAGGACTTTGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCATCTCTTCAACTGCTTaGCTCTTTAGATCTGTGACT +
Preference number: 4 (lower is better)
Translates to: LWVRTLFETSSHTKGCKCISSTA*LFRSVT
Trigger: AGTCACAGATCTAAAGAGGCAAGCAGTTGAAGAGAT...GCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACAAAGTCCTCACCCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp CAGCCACCACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGTCCATTTTTTCCTGCATCCAATaGTACTGGGAGGCTGAAACG +
Preference number: 4 (lower is better)
Translates to: QPPHFHVDFVCLLALLSIFSCIQ*YWEAET
Trigger: CGTTTCAGCCTCCCAGTAGCATTGGATGCAGGAAAA...AATGGACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGGTGGCTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000355371.9
CDS-3UTR GCA 90 bp ATGTCTTCCTATTTGGGATCCCTTGCTTTGGTTGACAGTGTCACCCCAGCCAGGCTCTCACGTTTTCAATaGTGTCTTCTTTGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: MSSYLGSLALVDSVTPARLSRFQ*CLLCFL
Trigger: CAGAAAACAAAGAAGACAGCATTGAAAACGTGAGAG...CCTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGAAGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp AGCATCCCCACGGAGGTCCTCGGGAGGCTTTGGACACAATCAATAGCATGTATTCTCTCACGTTTTCAATaGTGTCTTCTTTGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: SIPTEVLGRLWTQSIACILSRFQ*CLLCFL
Trigger: CAGAAAACAAAGAAGACAGCATTGAAAACGTGAGAG...AATACATGCTATTGATTGTGTCCAAAGCCTCCCGAGGACCTCCGTGGGGATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp ACTCAGGGCAAACTATGCTGGGTGCTAATAGCCCTGTTGATGCCTGCCAGTCAGACTCGGGCTATAAAATaGATCAACATTCGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: TQGKLCWVLIALLMPASQTRAIK*INIRFS
Trigger: AGAAAAACGAATGTTGATGCATTTTATAGCCCGAGT...CTGACTGGCAGGCATCAACAGGGCTATTAGCACCCAGCATAGTTTGCCCTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp ATACCTGTTACTAATTGTTCCCTAGTCCAGCTAACACATTTCACCCAAAGGGCAACTCAGGGCAAACTATaGTGGGTGCTAATAGCCCTG +
Preference number: 4 (lower is better)
Translates to: IPVTNCSLVQLTHFTQRATQGKL*WVLIAL
Trigger: CAGGGCTATTAGCACCCAGCATAGTTTGCCCTGAGT...TGCCCTTTGGGTGAAATGTGTTAGCTGGACTAGGGAACAATTAGTAACAGGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp AGCATCCCCACGGAGGTCCTCGGGAGGCTTTGGACACAATCAATAGCATGTATTTGTTTTCTGGTTCTCTaGTCTAAGGTCTTCATATTC +
Preference number: 4 (lower is better)
Translates to: SIPTEVLGRLWTQSIACICFLVL*SKVFIF
Trigger: GAATATGAAGACCTTAGAGCAGAGAACCAGAAAACA...AATACATGCTATTGATTGTGTCCAAAGCCTCCCGAGGACCTCCGTGGGGATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp ACAGCAGTGAAGCAAGAAAAATGTGTGCTTGTCACTTATCTTCACCATACTGTAGCTGCTGATCAGGGATaGAGCTCTGCAGCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: TAVKQEKCVLVTYLHHTVAADQG*SSAAEG
Trigger: ACCTTCTGCTGCAGAGCTCCATCCCTGATCAGCAGC...TACAGTATGGTGAAGATAAGTGACAAGCACACATTTTTCTTGCTTCACTGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTAACCCAACACTGGCATaGATTTGGACTCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: FTSAFMASNNCVCQHMDPNPTLA*IWTLRW
Trigger: CCACCTCAGAGTCCAAATCCATGCCAGTGTTGGGTT...AGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CCA 90 bp GTACCTCTATCTCTGTTCCTCACTCGGGCTATAAAATGCATCAACATTCGTTTTTGGGATCCCTTGCTTTaGTTGACAGTGTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: VPLSLFLTRAIKCINIRFWDPLL*LTVSPQ
Trigger: CTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCA...AAAACGAATGTTGATGCATTTTATAGCCCGAGTGAGGAACAGAGATAGAGGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp AGCCAAAGCATCCATCCTCCGTACTCAGGGCAAACTATGCTGGGTGCTAATAGCAGTGATAATGACAGATaGTTATCCATTCTCGACAAC +
Preference number: 4 (lower is better)
Translates to: SQSIHPPYSGQTMLGANSSDNDR*LSILDN
Trigger: GTTGTCGAGAATGGATAACCATCTGTCATTATCACT...GCTATTAGCACCCAGCATAGTTTGCCCTGAGTACGGAGGATGGATGCTTTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp ATGTCTTCCTATTTGGGATCCCTTGCTTTGGTTGACAGTGTCACCCCAGCCAGGAGTGATAATGACAGATaGTTATCCATTCTCGACAAC +
Preference number: 4 (lower is better)
Translates to: MSSYLGSLALVDSVTPARSDNDR*LSILDN
Trigger: GTTGTCGAGAATGGATAACCATCTGTCATTATCACT...CCTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGAAGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp CTGTGGGTGAGGACTTTGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCGGACATGTTAGTGCTTaGAAGAGAAACTTCAAACCA +
Preference number: 4 (lower is better)
Translates to: LWVRTLFETSSHTKGCKCGHVSA*KRNFKP
Trigger: TGGTTTGAAGTTTCTCTTCCAAGCACTAACATGTCC...GCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACAAAGTCCTCACCCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp CTGTGGGTGAGGACTTTGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCAGGGTCTCGTTAAAATaGTTACCATTTGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LWVRTLFETSSHTKGCKCRVSLK*LPFASP
Trigger: AGGAGAAGCAAATGGTAACCATTTTAACGAGACCCT...GCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACAAAGTCCTCACCCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TTAATAGCAATGGCACAAAGTACCTCTATCTCTGTTCCTCACTCGGGCTATAAAAACAGGAGCATCCTCTaGATAGGGCTGTACACACCC +
Preference number: 4 (lower is better)
Translates to: LIAMAQSTSISVPHSGYKNRSIL*IGLYTP
Trigger: GGGTGTGTACAGCCCTATCCAGAGGATGCTCCTGTT...TTTATAGCCCGAGTGAGGAACAGAGATAGAGGTACTTTGTGCCATTGCTATTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR CAA 72 bp CTGGTTGAATTTCGCCTTCATCCTCCTTGTGTTGAGTaGGATCTTTTTCAGCAACCTGGTCTTTGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: LVEFRLHPPCVE*DLFQQPGLWFG
Trigger: CCCAAACCAAAGACCAGGTTGCTGAAAAAGATCCAACTCAACACAAGGAGGATGAAGGCGAAATTCAACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615301.4
CDS-3UTR TCA 90 bp CTGTGGGTGAGGACTTTGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCTCTTTAATTTGCTTCTaGCACTGTACTGAGACACAA +
Preference number: 4 (lower is better)
Translates to: LWVRTLFETSSHTKGCKCSLICF*HCTETQ
Trigger: TTGTGTCTCAGTACAGTGTCAGAAGCAAATTAAAGA...GCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACAAAGTCCTCACCCACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp ACAGCAGTGAAGCAAGAAAAATGTGTGCTTGTCACTTATCTTCACCATACTGTAGCTTTCAAAAGCTGCTaGTCAGGGATGGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TAVKQEKCVLVTYLHHTVAFKSC*SGMELC
Trigger: GCAGAGCTCCATCCCTGATCAGCAGCTTTTGAAAGC...TACAGTATGGTGAAGATAAGTGACAAGCACACATTTTTCTTGCTTCACTGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp TTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAAGCTTTCAAAAGCTGCTaGTCAGGGATGGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: FMASNNCVCQHMDPFHCQAFKSC*SGMELC
Trigger: GCAGAGCTCCATCCCTGATCAGCAGCTTTTGAAAGC...TTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR TCA 90 bp CTGTGGGTGAGGACTTTGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCGCTCTTCTAATTCTTTaGCCTTTTGTTGATGCTGAA +
Preference number: 4 (lower is better)
Translates to: LWVRTLFETSSHTKGCKCALLIL*PFVDAE
Trigger: TTCAGCATCAACAAAAGGTCAAAGAATTAGAAGAGC...GCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACAAAGTCCTCACCCACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp ATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCAGGTGGTGGAGGTACTaGATTCTCAGACTGGTTCAC +
Preference number: 4 (lower is better)
Translates to: MASNNCVCQHMDPFHCQFRWWRY*ILRLVH
Trigger: GTGAACCAGTCTGAGAATTCAGTACCTCCACCACCT...GAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR TCA 90 bp TGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCAAGGTGGTGGAGGTACTaGATTCTCAGACTGGTTCAC +
Preference number: 4 (lower is better)
Translates to: WHLTTVSVNTWILFTVNSRWWRY*ILRLVH
Trigger: GTGAACCAGTCTGAGAATTCAGTACCTCCACCACCT...TGAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR TCA 90 bp CTGTGGGTGAGGACTTTGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCTTCACTGTGGTAGCCTaGAACATTGTATTTTTAGAG +
Preference number: 4 (lower is better)
Translates to: LWVRTLFETSSHTKGCKCFTVVA*NIVFLE
Trigger: CTCTAAAAATACAATGTTTCAGGCTACCACAGTGAA...GCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACAAAGTCCTCACCCACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp AGCCAAAGCATCCATCCTCCGTACTCAGGGCAAACTATGCTGGGTGCTAATAGCCTCTTTAGCTTGTTTTaGTCAATGAACATCTCTTGT +
Preference number: 4 (lower is better)
Translates to: SQSIHPPYSGQTMLGANSLFSLF*SMNISC
Trigger: ACAAGAGATGTTCATTGAGCAAAACAAGCTAAAGAG...GCTATTAGCACCCAGCATAGTTTGCCCTGAGTACGGAGGATGGATGCTTTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp TTAATAGCAATGGCACAAAGTACCTCTATCTCTGTTCCTCACTCGGGCTATAAAACTGCTATCTGCTTCTaGTGTCACCTTTCTGCGACG +
Preference number: 4 (lower is better)
Translates to: LIAMAQSTSISVPHSGYKTAICF*CHLSAT
Trigger: CGTCGCAGAAAGGTGACAGCAGAAGCAGATAGCAGT...TTTATAGCCCGAGTGAGGAACAGAGATAGAGGTACTTTGTGCCATTGCTATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000355371.9
CDS-3UTR GCA 90 bp AGCAGGACGTATGTAAGTTTTGTGTGTGCAATAGCTATGAACATACCTTGCAGAACTGCTATCTGCTTCTaGTGTCACCTTTCTGCGACG +
Preference number: 4 (lower is better)
Translates to: SRTYVSFVCAIAMNIPCRTAICF*CHLSAT
Trigger: CGTCGCAGAAAGGTGACAGCAGAAGCAGATAGCAGT...TCTGCAAGGTATGTTCATAGCTATTGCACACACAAAACTTACATACGTCCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000355371.9
CDS-3UTR GCA 90 bp ATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCACTGCTATCTGCTTCTaGTGTCACCTTTCTGCGACG +
Preference number: 4 (lower is better)
Translates to: MASNNCVCQHMDPFHCQFTAICF*CHLSAT
Trigger: CGTCGCAGAAAGGTGACAGCAGAAGCAGATAGCAGT...GAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR GCA 90 bp AGCCAAAGCATCCATCCTCCGTACTCAGGGCAAACTATGCTGGGTGCTAATAGCTGTAAGTTTTGTGTGTaGAATAGCTATGAACATACC +
Preference number: 4 (lower is better)
Translates to: SQSIHPPYSGQTMLGANSCKFCV*NSYEHT
Trigger: GGTATGTTCATAGCTATTGCACACACAAAACTTACA...GCTATTAGCACCCAGCATAGTTTGCCCTGAGTACGGAGGATGGATGCTTTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp ACAGCAGTGAAGCAAGAAAAATGTGTGCTTGTCACTTATCTTCACCATACTGTAAGCCCTGTTGATGCCTaGCAGTCAGAACTTCCATGG +
Preference number: 4 (lower is better)
Translates to: TAVKQEKCVLVTYLHHTVSPVDA*QSELPW
Trigger: CCATGGAAGTTCTGACTGGCAGGCATCAACAGGGCT...TACAGTATGGTGAAGATAAGTGACAAGCACACATTTTTCTTGCTTCACTGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp TACAATAACCAGGTCAGCAGTGTGACTTCAACACAGAGCAGTTTACTCACCTATGACTCTCTCAGAGCATaGAGGAGACTTGGTTGGTAT +
Preference number: 4 (lower is better)
Translates to: YNNQVSSVTSTQSSLLTYDSLRA*RRLGWY
Trigger: ATACCAACCAAGTCTCCTGCATGCTCTGAGAGAGTC...ATAGGTGAGTAAACTGCTCTGTGTTGAAGTCACACTGCTGACCTGGTTATTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp ATACCTGTTACTAATTGTTCCCTAGTCCAGCTAACACATTTCACCCAAAGGGCACTCTGCAGCAGAAGGTaGCTTTGTCTCTTTAGCTTG +
Preference number: 4 (lower is better)
Translates to: IPVTNCSLVQLTHFTQRALCSRR*LCLFSL
Trigger: CAAGCTAAAGAGACAAAGCCACCTTCTGCTGCAGAG...TGCCCTTTGGGTGAAATGTGTTAGCTGGACTAGGGAACAATTAGTAACAGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp AGCAGGACGTATGTAAGTTTTGTGTGTGCAATAGCTATGAACATACCTTGCAGAAACCCAACACTGGCATaGATTTGGACTCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SRTYVSFVCAIAMNIPCRNPTLA*IWTLRW
Trigger: CCACCTCAGAGTCCAAATCCATGCCAGTGTTGGGTT...TCTGCAAGGTATGTTCATAGCTATTGCACACACAAAACTTACATACGTCCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000355371.9
CDS-3UTR CCA 90 bp TGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCAAACCCAACACTGGCATaGATTTGGACTCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: WHLTTVSVNTWILFTVNSNPTLA*IWTLRW
Trigger: CCACCTCAGAGTCCAAATCCATGCCAGTGTTGGGTT...TGAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CCA 90 bp TATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCTTTACCAATCAGGTCCTCGGGAGGCTTTaGACACAATCAATAGCATGT +
Preference number: 4 (lower is better)
Translates to: YFCCQLHTQSNTPSFTNQVLGRL*TQSIAC
Trigger: ACATGCTATTGATTGTGTCCAAAGCCTCCCGAGGAC...CTGATTGGTAAAGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp ACAGCAGTGAAGCAAGAAAAATGTGTGCTTGTCACTTATCTTCACCATACTGTATGGGATCCCTTGCTTTaGTTGACAGTGTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: TAVKQEKCVLVTYLHHTVWDPLL*LTVSPQ
Trigger: CTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCA...TACAGTATGGTGAAGATAAGTGACAAGCACACATTTTTCTTGCTTCACTGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp AGCAGGACGTATGTAAGTTTTGTGTGTGCAATAGCTATGAACATACCTTGCAGACAGGGCAAACTATGCTaGGTGCTAATAGCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: SRTYVSFVCAIAMNIPCRQGKLC*VLIALL
Trigger: CAACAGGGCTATTAGCACCCAGCATAGTTTGCCCTG...TCTGCAAGGTATGTTCATAGCTATTGCACACACAAAACTTACATACGTCCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TTCTTTAATAGCAATGGCACAAAGTACCTCTATCTCTGTTCCTCACTCGGGCTAAGAAGCTCTCTGTGCTaGGAACAGATGTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: FFNSNGTKYLYLCSSLGLRSSLC*EQMSIF
Trigger: GAAGATGGACATCTGTTCCCAGCACAGAGAGCTTCT...TAGCCCGAGTGAGGAACAGAGATAGAGGTACTTTGTGCCATTGCTATTAAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TATTACAATAACCAGGTCAGCAGTGTGACTTCAACACAGAGCAGTTTACTCACCAGAAGCTCTCTGTGCTaGGAACAGATGTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: YYNNQVSSVTSTQSSLLTRSSLC*EQMSIF
Trigger: GAAGATGGACATCTGTTCCCAGCACAGAGAGCTTCT...GGTGAGTAAACTGCTCTGTGTTGAAGTCACACTGCTGACCTGGTTATTGTAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCAAGGCAGACCACTGATTaGAGGGCAAACCACTTTCCT +
Preference number: 4 (lower is better)
Translates to: WHLTTVSVNTWILFTVNSRQTTD*RANHFP
Trigger: AGGAAAGTGGTTTGCCCTCCAATCAGTGGTCTGCCT...TGAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392901.10
CDS-3UTR TCA 90 bp TATCTTCACCATACTGTACATAAGAACTCTGATAAAATATGGTACTTGTGCCACCTTCTGACACTGTACTaGGACACAAGTCTCGGCGGC +
Preference number: 4 (lower is better)
Translates to: YLHHTVHKNSDKIWYLCHLLTLY*DTSLGG
Trigger: GCCGCCGAGACTTGTGTCTCAGTACAGTGTCAGAAG...GTGGCACAAGTACCATATTTTATCAGAGTTCTTATGTACAGTATGGTGAAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp CCAATATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCTTTACCAACTACGAGTTTGCTCTTaGGATTTTCCAGCTCAATGG +
Preference number: 4 (lower is better)
Translates to: PIFLLPTPHSVKHPILYQLRVCS*DFPAQW
Trigger: CCATTGAGCTGGAAAATCTCAAGAGCAAACTCGTAG...TTGGTAAAGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATATTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp TTACCAACTTACTACTGTAAAATTCAAGGTTTGGACTTTCACCTCAGTTCTGTAATCCCTTGCTTTGGTTaGCAGTGTCACCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LPTYYCKIQGLDFHLSSVIPCFG*QCHPSQ
Trigger: CTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGAT...TACAGAACTGAGGTGAAAGTCCAAACCTTGAATTTTACAGTAGTAAGTTGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp AATGTCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGATCCCTTGCTTTGGTTaGCAGTGTCACCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: NVYSPCQYNNTNHVLIEKIPCFG*QCHPSQ
Trigger: CTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGAT...CTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp CAGTCTACTGTAGAAAATAACTTGTATGCCACAGTACCCAACAATTTCCATGCTACCAGGTCAGCAGTGTaGCTTCAACACAGAGCAGTT +
Preference number: 4 (lower is better)
Translates to: QSTVENNLYATVPNNFHATRSAV*LQHRAV
Trigger: AACTGCTCTGTGTTGAAGTCACACTGCTGACCTGGT...AGCATGGAAATTGTTGGGTACTGTGGCATACAAGTTATTTTCTACAGTAGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp CTTCCAAACATGTCAGGCTTCTGGTTTATGGATCAGCAGTTGGAGCTGTCTGTCTGTTCACATACCCTTTaGAAAATACACACACACACA +
Preference number: 4 (lower is better)
Translates to: LPNMSGFWFMDQQLELSVCSHTL*KIHTHT
Trigger: TGTGTGTGTGTGTATTTTTCAAAGGGTATGTGAACA...GACAGACAGCTCCAACTGCTGATCCATAAACCAGAAGCCTGACATGTTTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615301.4
CDS-3UTR TCA 90 bp TTGAGCTTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGCATCAATCTGGAAAATaGAGGCAGACCACTGATTGG +
Preference number: 4 (lower is better)
Translates to: LSFTSAFMASNNCVCQHMHQSGK*RQTTDW
Trigger: CCAATCAGTGGTCTGCCTTCATTTTCCAGATTGATG...CATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAAGCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392901.10
CDS-3UTR GCA 90 bp TTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAAACTGCTATCTGCTTCTaGTGTCACCTTTCTGCGACG +
Preference number: 4 (lower is better)
Translates to: FMASNNCVCQHMDPFHCQTAICF*CHLSAT
Trigger: CGTCGCAGAAAGGTGACAGCAGAAGCAGATAGCAGT...TTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR GCA 90 bp TTGAGCTTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGCGGGCTGTTGAATTCTaGCTCCAGAGTTTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: LSFTSAFMASNNCVCQHMRAVEF*LQSFLV
Trigger: AACAAGAAAACTCTGGAGGCAGAATTCAACAGCCCG...CATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAAGCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR GCA 90 bp ATACCTGTTACTAATTGTTCCCTAGTCCAGCTAACACATTTCACCCAAAGGGCACAATTTCCATGCTGCTaGAGTTTCTCCATCAAGAGG +
Preference number: 4 (lower is better)
Translates to: IPVTNCSLVQLTHFTQRAQFPCC*SFSIKR
Trigger: CCTCTTGATGGAGAAACTGCAGCAGCATGGAAATTG...TGCCCTTTGGGTGAAATGTGTTAGCTGGACTAGGGAACAATTAGTAACAGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp AATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTTTGTTTGTCCACTCCAATCCTTATaGAGGGACTGCTTGATGAGT +
Preference number: 4 (lower is better)
Translates to: NSVNFVLQPPHFHVDFVCPLQSL*RDCLMS
Trigger: ACTCATCAAGCAGTCCCTGCATAAGGATTGGAGTGG...ACAAACAAAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp CAGCCACCACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGTCCATTTATTCGCCTATTGCTTaGTCCTTCAGACTGGTAATG +
Preference number: 4 (lower is better)
Translates to: QPPHFHVDFVCLLALLSIYSPIA*SFRLVM
Trigger: CATTACCAGTCTGAAGGAGCAAGCAATAGGCGAATA...AATGGACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGGTGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp CAGTCTACTGTAGAAAATAACTTGTATGCCACAGTACCCAACAATTTCCATGCTCCTAGAAGCTCTCTGTaGTGGGAACAGATGTCCATC +
Preference number: 4 (lower is better)
Translates to: QSTVENNLYATVPNNFHAPRSSL*WEQMSI
Trigger: GATGGACATCTGTTCCCAGCACAGAGAGCTTCTAGG...AGCATGGAAATTGTTGGGTACTGTGGCATACAAGTTATTTTCTACAGTAGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp GTACCTCTATCTCTGTTCCTCACTCGGGCTATAAAATGCATCAACATTCGTTTTCTCTGCAGCAGAAGGTaGCTTTGTCTCTTTAGCTTG +
Preference number: 4 (lower is better)
Translates to: VPLSLFLTRAIKCINIRFLCSRR*LCLFSL
Trigger: CAAGCTAAAGAGACAAAGCCACCTTCTGCTGCAGAG...AAAACGAATGTTGATGCATTTTATAGCCCGAGTGAGGAACAGAGATAGAGGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCACTCTGCAGCAGAAGGTaGCTTTGTCTCTTTAGCTTG +
Preference number: 4 (lower is better)
Translates to: WHLTTVSVNTWILFTVNSLCSRR*LCLFSL
Trigger: CAAGCTAAAGAGACAAAGCCACCTTCTGCTGCAGAG...TGAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CCA 90 bp TTACCAACTTACTACTGTAAAATTCAAGGTTTGGACTTTCACCTCAGTTCTGTAGCTGCTGATCAGGGATaGAGCTCTGCAGCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: LPTYYCKIQGLDFHLSSVAADQG*SSAAEG
Trigger: ACCTTCTGCTGCAGAGCTCCATCCCTGATCAGCAGC...TACAGAACTGAGGTGAAAGTCCAAACCTTGAATTTTACAGTAGTAAGTTGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTATTTGGACTCTGAGGTaGCTAATATCCCAGTTGGAC +
Preference number: 4 (lower is better)
Translates to: FTSAFMASNNCVCQHMDPIWTLR*LISQLD
Trigger: GTCCAACTGGGATATTAGCCACCTCAGAGTCCAAAT...AGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CCA 90 bp TTGAGCTTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGACACTGGCATGGATTTaGACTCTGAGGTGGCTAATA +
Preference number: 4 (lower is better)
Translates to: LSFTSAFMASNNCVCQHMTLAWI*TLRWLI
Trigger: TATTAGCCACCTCAGAGTCCAAATCCATGCCAGTGT...CATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAAGCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CCA 90 bp AGCAGGACGTATGTAAGTTTTGTGTGTGCAATAGCTATGAACATACCTTGCAGAGTCCTCGGGAGGCTTTaGACACAATCAATAGCATGT +
Preference number: 4 (lower is better)
Translates to: SRTYVSFVCAIAMNIPCRVLGRL*TQSIAC
Trigger: ACATGCTATTGATTGTGTCCAAAGCCTCCCGAGGAC...TCTGCAAGGTATGTTCATAGCTATTGCACACACAAAACTTACATACGTCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TTAATAGCAATGGCACAAAGTACCTCTATCTCTGTTCCTCACTCGGGCTATAAACTGCTGAAACTGCTGTaGGTGAGGACTTTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: LIAMAQSTSISVPHSGYKLLKLL*VRTLFE
Trigger: CTCAAACAAAGTCCTCACCCACAGCAGTTTCAGCAG...TTTATAGCCCGAGTGAGGAACAGAGATAGAGGTACTTTGTGCCATTGCTATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp CAGCCACCACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGTCCATTCAGAACAAACATGACTaGGTGTTCACATACCCTTTG +
Preference number: 4 (lower is better)
Translates to: QPPHFHVDFVCLLALLSIQNKHD*VFTYPL
Trigger: CAAAGGGTATGTGAACACCCAGTCATGTTTGTTCTG...AATGGACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGGTGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR CAA 72 bp GTTTTCTGGTTGAATTTCGCCTTCATCCTCCTTGTGTaGAGTTGGATCTTTTTCAGCAACCTGGTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: VFWLNFAFILLV*SWIFFSNLVFG
Trigger: ACCAAAGACCAGGTTGCTGAAAAAGATCCAACTCAACACAAGGAGGATGAAGGCGAAATTCAACCAGAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615301.4
CDS-3UTR TCA 90 bp AATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTTTGTTTGTCTACGAGTTTGCTCTTaGGATTTTCCAGCTCAATGG +
Preference number: 4 (lower is better)
Translates to: NSVNFVLQPPHFHVDFVCLRVCS*DFPAQW
Trigger: CCATTGAGCTGGAAAATCTCAAGAGCAAACTCGTAG...ACAAACAAAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp ATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCCTACGAGTTTGCTCTTaGGATTTTCCAGCTCAATGG +
Preference number: 4 (lower is better)
Translates to: MASNNCVCQHMDPFHCQFLRVCS*DFPAQW
Trigger: CCATTGAGCTGGAAAATCTCAAGAGCAAACTCGTAG...GAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR TCA 90 bp AATGTCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGGCTTTCAAAAGCTGCTaGTCAGGGATGGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: NVYSPCQYNNTNHVLIEKAFKSC*SGMELC
Trigger: GCAGAGCTCCATCCCTGATCAGCAGCTTTTGAAAGC...CTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp TTGAGCTTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGCTTCAAGTTGCTGGGTaGGTTTTGCATTTTCGTCTA +
Preference number: 4 (lower is better)
Translates to: LSFTSAFMASNNCVCQHMLQVAG*VLHFRL
Trigger: TAGACGAAAATGCAAAACTCACCCAGCAACTTGAAG...CATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAAGCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR TCA 90 bp TTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTCTTCAAGTTGCTGGGTaGGTTTTGCATTTTCGTCTA +
Preference number: 4 (lower is better)
Translates to: FTSAFMASNNCVCQHMDPLQVAG*VLHFRL
Trigger: TAGACGAAAATGCAAAACTCACCCAGCAACTTGAAG...AGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR TCA 90 bp TTGAGCTTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGGCTCCAGTTGCTGTTTaGGGTTGTGTATTTCTTTGT +
Preference number: 4 (lower is better)
Translates to: LSFTSAFMASNNCVCQHMAPVAV*GCVFLC
Trigger: ACAAAGAAATACACAACCTCAAACAGCAACTGGAGC...CATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAAGCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR TCA 90 bp ATACCTGTTACTAATTGTTCCCTAGTCCAGCTAACACATTTCACCCAAAGGGCATCATCCTCCTTGTGTTaGGTTGGATCTTTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: IPVTNCSLVQLTHFTQRASSSLC*VGSFSA
Trigger: TGCTGAAAAAGATCCAACTCAACACAAGGAGGATGA...TGCCCTTTGGGTGAAATGTGTTAGCTGGACTAGGGAACAATTAGTAACAGGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp TTCTTTAATAGCAATGGCACAAAGTACCTCTATCTCTGTTCCTCACTCGGGCTATCTTTGTTTTCTGGTTaGATTTCGCCTTCATCCTCC +
Preference number: 4 (lower is better)
Translates to: FFNSNGTKYLYLCSSLGLSLFSG*ISPSSS
Trigger: GGAGGATGAAGGCGAAATTCAACCAGAAAACAAAGA...TAGCCCGAGTGAGGAACAGAGATAGAGGTACTTTGTGCCATTGCTATTAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp AATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTTTGTTTGTATTCCTAAATGTGTGTaGGTTGCATGCTGGCAGACA +
Preference number: 4 (lower is better)
Translates to: NSVNFVLQPPHFHVDFVCIPKCV*VACWQT
Trigger: TGTCTGCCAGCATGCAACTCACACACATTTAGGAAT...ACAAACAAAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp TTCTTTAATAGCAATGGCACAAAGTACCTCTATCTCTGTTCCTCACTCGGGCTACACAACGAGTGTAACTaGACAGGTAGAGTATGCATT +
Preference number: 4 (lower is better)
Translates to: FFNSNGTKYLYLCSSLGLHNECN*TGRVCI
Trigger: AATGCATACTCTACCTGTTCAGTTACACTCGTTGTG...TAGCCCGAGTGAGGAACAGAGATAGAGGTACTTTGTGCCATTGCTATTAAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp GTTTTCAGTTTATCTCAGTCTACTGTAGAAAATAACTTGTATGCCACAGTACCCCACACACACACATCATaGGACTATGCCCTGGAACAG +
Preference number: 4 (lower is better)
Translates to: VFSLSQSTVENNLYATVPHTHTS*DYALEQ
Trigger: CTGTTCCAGGGCATAGTCTCATGATGTGTGTGTGTG...GGGTACTGTGGCATACAAGTTATTTTCTACAGTAGACTGAGATAAACTGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp TGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCACTGCTGTCACCTTTCTaGGACGCAAAATCCTTTCTA +
Preference number: 4 (lower is better)
Translates to: WHLTTVSVNTWILFTVNSLLSPF*DAKSFL
Trigger: TAGAAAGGATTTTGCGTCGCAGAAAGGTGACAGCAG...TGAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR GCA 90 bp ATACCTGTTACTAATTGTTCCCTAGTCCAGCTAACACATTTCACCCAAAGGGCACAACAATTTCCATGCTaGTGCAGTTTCTCCATCAAG +
Preference number: 4 (lower is better)
Translates to: IPVTNCSLVQLTHFTQRAQQFPC*CSFSIK
Trigger: CTTGATGGAGAAACTGCAGCAGCATGGAAATTGTTG...TGCCCTTTGGGTGAAATGTGTTAGCTGGACTAGGGAACAATTAGTAACAGGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp TATCTTCACCATACTGTACATAAGAACTCTGATAAAATATGGTACTTGTGCCACAGCCCTGTTGATGCCTaGCAGTCAGAACTTCCATGG +
Preference number: 4 (lower is better)
Translates to: YLHHTVHKNSDKIWYLCHSPVDA*QSELPW
Trigger: CCATGGAAGTTCTGACTGGCAGGCATCAACAGGGCT...GTGGCACAAGTACCATATTTTATCAGAGTTCTTATGTACAGTATGGTGAAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp AATGTCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGAGCCCTGTTGATGCCTaGCAGTCAGAACTTCCATGG +
Preference number: 4 (lower is better)
Translates to: NVYSPCQYNNTNHVLIEKSPVDA*QSELPW
Trigger: CCATGGAAGTTCTGACTGGCAGGCATCAACAGGGCT...CTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp TCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGGACTACTCAGGGCAAACTATaGTGGGTGCTAATAGCCCTG +
Preference number: 4 (lower is better)
Translates to: STALANITTLIMCLLKRTTQGKL*WVLIAL
Trigger: CAGGGCTATTAGCACCCAGCATAGTTTGCCCTGAGT...AGTCCTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp CAGTCTACTGTAGAAAATAACTTGTATGCCACAGTACCCAACAATTTCCATGCTCCACTCCAATCCTTATaGAGGGACTGCTTGATGAGT +
Preference number: 4 (lower is better)
Translates to: QSTVENNLYATVPNNFHAPLQSL*RDCLMS
Trigger: ACTCATCAAGCAGTCCCTGCATAAGGATTGGAGTGG...AGCATGGAAATTGTTGGGTACTGTGGCATACAAGTTATTTTCTACAGTAGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp TTGAGCTTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGTATTCGCCTATTGCTTaGTCCTTCAGACTGGTAATG +
Preference number: 4 (lower is better)
Translates to: LSFTSAFMASNNCVCQHMYSPIA*SFRLVM
Trigger: CATTACCAGTCTGAAGGAGCAAGCAATAGGCGAATA...CATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAAGCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392903.3
CDS-3UTR CCA 90 bp TTGAGCTTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGACTGAATTCTCAGACTaGTTCACTCGTTTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: LSFTSAFMASNNCVCQHMTEFSD*FTRFWS
Trigger: ACTCCAGAAACGAGTGAACCAGTCTGAGAATTCAGT...CATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAAGCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CCA 90 bp TGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCAATTTGGACTCTGAGGTaGCTAATATCCCAGTTGGAC +
Preference number: 4 (lower is better)
Translates to: WHLTTVSVNTWILFTVNSIWTLR*LISQLD
Trigger: GTCCAACTGGGATATTAGCCACCTCAGAGTCCAAAT...TGAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CCA 90 bp GTACCTCTATCTCTGTTCCTCACTCGGGCTATAAAATGCATCAACATTCGTTTTTTATGGATCAGCAGTTaGAGCTGTCTGTCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: VPLSLFLTRAIKCINIRFLWISS*SCLSLS
Trigger: TGAGAGAGACAGACAGCTCCAACTGCTGATCCATAA...AAAACGAATGTTGATGCATTTTATAGCCCGAGTGAGGAACAGAGATAGAGGTAC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp ACAGCAGTGAAGCAAGAAAAATGTGTGCTTGTCACTTATCTTCACCATACTGTAGTCCTCGGGAGGCTTTaGACACAATCAATAGCATGT +
Preference number: 4 (lower is better)
Translates to: TAVKQEKCVLVTYLHHTVVLGRL*TQSIAC
Trigger: ACATGCTATTGATTGTGTCCAAAGCCTCCCGAGGAC...TACAGTATGGTGAAGATAAGTGACAAGCACACATTTTTCTTGCTTCACTGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TATTACAATAACCAGGTCAGCAGTGTGACTTCAACACAGAGCAGTTTACTCACCCTATGTCTTCCTATTTaGGATCCCTTGCTTTGGTTG +
Preference number: 4 (lower is better)
Translates to: YYNNQVSSVTSTQSSLLTLCLPI*DPLLWL
Trigger: CAACCAAAGCAAGGGATCCCAAATAGGAAGACATAG...GGTGAGTAAACTGCTCTGTGTTGAAGTCACACTGCTGACCTGGTTATTGTAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCTTTACCAATCAGCTATGTCTTCCTATTTaGGATCCCTTGCTTTGGTTG +
Preference number: 4 (lower is better)
Translates to: YFCCQLHTQSNTPSFTNQLCLPI*DPLLWL
Trigger: CAACCAAAGCAAGGGATCCCAAATAGGAAGACATAG...CTGATTGGTAAAGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TATTACAATAACCAGGTCAGCAGTGTGACTTCAACACAGAGCAGTTTACTCACCCAGAACAAACATGACTaGGTGTTCACATACCCTTTG +
Preference number: 4 (lower is better)
Translates to: YYNNQVSSVTSTQSSLLTQNKHD*VFTYPL
Trigger: CAAAGGGTATGTGAACACCCAGTCATGTTTGTTCTG...GGTGAGTAAACTGCTCTGTGTTGAAGTCACACTGCTGACCTGGTTATTGTAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp TTCTTTAATAGCAATGGCACAAAGTACCTCTATCTCTGTTCCTCACTCGGGCTAGCTTGTTTTGCTCAATaGACATCTCTTGTGCAAATG +
Preference number: 4 (lower is better)
Translates to: FFNSNGTKYLYLCSSLGLACFAQ*TSLVQM
Trigger: CATTTGCACAAGAGATGTTCATTGAGCAAAACAAGC...TAGCCCGAGTGAGGAACAGAGATAGAGGTACTTTGTGCCATTGCTATTAAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp CAGCCACCACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGTCCATTTTCACTGTGGTAGCCTaGAACATTGTATTTTTAGAG +
Preference number: 4 (lower is better)
Translates to: QPPHFHVDFVCLLALLSIFTVVA*NIVFLE
Trigger: CTCTAAAAATACAATGTTTCAGGCTACCACAGTGAA...AATGGACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGGTGGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp CAGTCTACTGTAGAAAATAACTTGTATGCCACAGTACCCAACAATTTCCATGCTTCTTTTGCCCTTAGGTaGAAAACACCTGACAGCTAC +
Preference number: 4 (lower is better)
Translates to: QSTVENNLYATVPNNFHASFALR*KTPDSY
Trigger: GTAGCTGTCAGGTGTTTTTCACCTAAGGGCAAAAGA...AGCATGGAAATTGTTGGGTACTGTGGCATACAAGTTATTTTCTACAGTAGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp TATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCTTTACCAATCAGGTAGGCAGAAAAAGGTaGGTGAATATCTTCCATCAA +
Preference number: 4 (lower is better)
Translates to: YFCCQLHTQSNTPSFTNQVGRKR*VNIFHQ
Trigger: TTGATGGAAGATATTCACTCACCTTTTTCTGCCTAC...CTGATTGGTAAAGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp GTACCTCTATCTCTGTTCCTCACTCGGGCTATAAAATGCATCAACATTCGTTTTCACAACGAGTGTAACTaGACAGGTAGAGTATGCATT +
Preference number: 4 (lower is better)
Translates to: VPLSLFLTRAIKCINIRFHNECN*TGRVCI
Trigger: AATGCATACTCTACCTGTTCAGTTACACTCGTTGTG...AAAACGAATGTTGATGCATTTTATAGCCCGAGTGAGGAACAGAGATAGAGGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp ATTGAAAAGGACTTCCAAACATGTCAGGCTTCTGGTTTATGGATCAGCAGTTGGTGCTTGATGAGTCTTTaGAGGTCAGTGATAATGACA +
Preference number: 4 (lower is better)
Translates to: IEKDFQTCQASGLWISSWCLMSL*RSVIMT
Trigger: TGTCATTATCACTGACCTTCAAAGACTCATCAAGCA...CCAACTGCTGATCCATAAACCAGAAGCCTGACATGTTTGGAAGTCCTTTTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615301.4
CDS-3UTR TCA 90 bp TTACCAACTTACTACTGTAAAATTCAAGGTTTGGACTTTCACCTCAGTTCTGTACACACACACACATCATaGGACTATGCCCTGGAACAG +
Preference number: 4 (lower is better)
Translates to: LPTYYCKIQGLDFHLSSVHTHTS*DYALEQ
Trigger: CTGTTCCAGGGCATAGTCTCATGATGTGTGTGTGTG...TACAGAACTGAGGTGAAAGTCCAAACCTTGAATTTTACAGTAGTAAGTTGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp TACAATAACCAGGTCAGCAGTGTGACTTCAACACAGAGCAGTTTACTCACCTATTTATTCTCAAAGCTATaGTTTGAAACTGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: YNNQVSSVTSTQSSLLTYLFSKL*FETGSG
Trigger: GCCTGAGCCAGTTTCAAATCATAGCTTTGAGAATAA...ATAGGTGAGTAAACTGCTCTGTGTTGAAGTCACACTGCTGACCTGGTTATTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp ATACCTGTTACTAATTGTTCCCTAGTCCAGCTAACACATTTCACCCAAAGGGCATCTACATGTCTGTGCTaGAAAGCACTGACACATTTT +
Preference number: 4 (lower is better)
Translates to: IPVTNCSLVQLTHFTQRASTCLC*KALTHF
Trigger: AAAATGTGTCAGTGCTTTTCAGCACAGACATGTAGA...TGCCCTTTGGGTGAAATGTGTTAGCTGGACTAGGGAACAATTAGTAACAGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp ATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCAGCTCCAGGTTTACTTaGATCTCCTCATACTCTTCT +
Preference number: 4 (lower is better)
Translates to: MASNNCVCQHMDPFHCQFSSRFT*ISSYSS
Trigger: AGAAGAGTATGAGGAGATGCAAGTAAACCTGGAGCT...GAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR GCA 90 bp GTACCTCTATCTCTGTTCCTCACTCGGGCTATAAAATGCATCAACATTCGTTTTAGCTCCAGGTTTACTTaGATCTCCTCATACTCTTCT +
Preference number: 4 (lower is better)
Translates to: VPLSLFLTRAIKCINIRFSSRFT*ISSYSS
Trigger: AGAAGAGTATGAGGAGATGCAAGTAAACCTGGAGCT...AAAACGAATGTTGATGCATTTTATAGCCCGAGTGAGGAACAGAGATAGAGGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp TTCTTTAATAGCAATGGCACAAAGTACCTCTATCTCTGTTCCTCACTCGGGCTATGTTTCTGGTTGAGTTaGCTTTTCTTTCTTAGCACC +
Preference number: 4 (lower is better)
Translates to: FFNSNGTKYLYLCSSLGLCFWLS*LFFLST
Trigger: GGTGCTAAGAAAGAAAAGGCAACTCAACCAGAAACA...TAGCCCGAGTGAGGAACAGAGATAGAGGTACTTTGTGCCATTGCTATTAAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp ATACCTGTTACTAATTGTTCCCTAGTCCAGCTAACACATTTCACCCAAAGGGCATGTTTCTGGTTGAGTTaGCTTTTCTTTCTTAGCACC +
Preference number: 4 (lower is better)
Translates to: IPVTNCSLVQLTHFTQRACFWLS*LFFLST
Trigger: GGTGCTAAGAAAGAAAAGGCAACTCAACCAGAAACA...TGCCCTTTGGGTGAAATGTGTTAGCTGGACTAGGGAACAATTAGTAACAGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp CAGTCTACTGTAGAAAATAACTTGTATGCCACAGTACCCAACAATTTCCATGCTCTGCTGTCACCTTTCTaGGACGCAAAATCCTTTCTA +
Preference number: 4 (lower is better)
Translates to: QSTVENNLYATVPNNFHALLSPF*DAKSFL
Trigger: TAGAAAGGATTTTGCGTCGCAGAAAGGTGACAGCAG...AGCATGGAAATTGTTGGGTACTGTGGCATACAAGTTATTTTCTACAGTAGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000355371.9
CDS-3UTR GCA 90 bp TTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAACGGGCTGTTGAATTCTaGCTCCAGAGTTTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: FMASNNCVCQHMDPFHCQRAVEF*LQSFLV
Trigger: AACAAGAAAACTCTGGAGGCAGAATTCAACAGCCCG...TTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR GCA 90 bp TATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCTTTACCAATCAGATCCATTGCCTGAATTaGTCTTTTGTAAGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: YFCCQLHTQSNTPSFTNQIHCLN*SFVSQC
Trigger: ACACTGGCTTACAAAAGAGCAATTCAGGCAATGGAT...CTGATTGGTAAAGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp TTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTATTCAACACATATTTTaGAGACCTTGGGCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: FTSAFMASNNCVCQHMDPIQHIF*RPWACN
Trigger: ATTGCAGGCCCAAGGTCTGCAAAATATGTGTTGAAT...AGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR GCA 90 bp ACAGCAGTGAAGCAAGAAAAATGTGTGCTTGTCACTTATCTTCACCATACTGTATTTTCCTGCATCCAATaGTACTGGGAGGCCAGTATT +
Preference number: 4 (lower is better)
Translates to: TAVKQEKCVLVTYLHHTVFSCIQ*YWEASI
Trigger: AATACTGGCCTCCCAGTAGCATTGGATGCAGGAAAA...TACAGTATGGTGAAGATAAGTGACAAGCACACATTTTTCTTGCTTCACTGCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615301.4
CDS-3UTR CCA 90 bp AATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTTTGTTTGTTTCAGTTATTACATCTaGTCCCAGCTTGGCCATGTA +
Preference number: 4 (lower is better)
Translates to: NSVNFVLQPPHFHVDFVCFSYYI*SQLGHV
Trigger: TACATGGCCAAGCTGGGACCAGATGTAATAACTGAA...ACAAACAAAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp ATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCTTCAGTTATTACATCTaGTCCCAGCTTGGCCATGTA +
Preference number: 4 (lower is better)
Translates to: MASNNCVCQHMDPFHCQFFSYYI*SQLGHV
Trigger: TACATGGCCAAGCTGGGACCAGATGTAATAACTGAA...GAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CCA 90 bp TTAATAGCAATGGCACAAAGTACCTCTATCTCTGTTCCTCACTCGGGCTATAAATTCAGTTATTACATCTaGTCCCAGCTTGGCCATGTA +
Preference number: 4 (lower is better)
Translates to: LIAMAQSTSISVPHSGYKFSYYI*SQLGHV
Trigger: TACATGGCCAAGCTGGGACCAGATGTAATAACTGAA...TTTATAGCCCGAGTGAGGAACAGAGATAGAGGTACTTTGTGCCATTGCTATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp GTTTTCAGTTTATCTCAGTCTACTGTAGAAAATAACTTGTATGCCACAGTACCCCTCTGCAGCAGAAGGTaGCTTTGTCTCTTTAGCTTG +
Preference number: 4 (lower is better)
Translates to: VFSLSQSTVENNLYATVPLCSRR*LCLFSL
Trigger: CAAGCTAAAGAGACAAAGCCACCTTCTGCTGCAGAG...GGGTACTGTGGCATACAAGTTATTTTCTACAGTAGACTGAGATAAACTGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TTCTTTAATAGCAATGGCACAAAGTACCTCTATCTCTGTTCCTCACTCGGGCTATCTTCTTCAAGTTGCTaGGTGAGTTTTGCATTTTCG +
Preference number: 4 (lower is better)
Translates to: FFNSNGTKYLYLCSSLGLSSSSC*VSFAFS
Trigger: CGAAAATGCAAAACTCACCCAGCAACTTGAAGAAGA...TAGCCCGAGTGAGGAACAGAGATAGAGGTACTTTGTGCCATTGCTATTAAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TATTACAATAACCAGGTCAGCAGTGTGACTTCAACACAGAGCAGTTTACTCACCTCTTCTTCAAGTTGCTaGGTGAGTTTTGCATTTTCG +
Preference number: 4 (lower is better)
Translates to: YYNNQVSSVTSTQSSLLTSSSSC*VSFAFS
Trigger: CGAAAATGCAAAACTCACCCAGCAACTTGAAGAAGA...GGTGAGTAAACTGCTCTGTGTTGAAGTCACACTGCTGACCTGGTTATTGTAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TTAATAGCAATGGCACAAAGTACCTCTATCTCTGTTCCTCACTCGGGCTATAAAACTGAATTCTCAGACTaGTTCACTCGTTTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: LIAMAQSTSISVPHSGYKTEFSD*FTRFWS
Trigger: ACTCCAGAAACGAGTGAACCAGTCTGAGAATTCAGT...TTTATAGCCCGAGTGAGGAACAGAGATAGAGGTACTTTGTGCCATTGCTATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp ATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCACTGAATTCTCAGACTaGTTCACTCGTTTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: MASNNCVCQHMDPFHCQFTEFSD*FTRFWS
Trigger: ACTCCAGAAACGAGTGAACCAGTCTGAGAATTCAGT...GAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CCA 90 bp TTGAGCTTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGCTGTTTTTGTTACACTaGATACAGAACCCAACACTG +
Preference number: 4 (lower is better)
Translates to: LSFTSAFMASNNCVCQHMLFLLH*IQNPTL
Trigger: CAGTGTTGGGTTCTGTATCCAGTGTAACAAAAACAG...CATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAAGCTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CCA 90 bp GTACCTCTATCTCTGTTCCTCACTCGGGCTATAAAATGCATCAACATTCGTTTTACCTGGTCTTTGGTTTaGGGTTCATGTGTAGAAACA +
Preference number: 4 (lower is better)
Translates to: VPLSLFLTRAIKCINIRFTWSLV*GSCVET
Trigger: TGTTTCTACACATGAACCCCAAACCAAAGACCAGGT...AAAACGAATGTTGATGCATTTTATAGCCCGAGTGAGGAACAGAGATAGAGGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TTAATAGCAATGGCACAAAGTACCTCTATCTCTGTTCCTCACTCGGGCTATAAAAACATGTCAGGCTTCTaGTTTATGGATCAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: LIAMAQSTSISVPHSGYKNMSGF*FMDQQL
Trigger: CAACTGCTGATCCATAAACCAGAAGCCTGACATGTT...TTTATAGCCCGAGTGAGGAACAGAGATAGAGGTACTTTGTGCCATTGCTATTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp ATACCTGTTACTAATTGTTCCCTAGTCCAGCTAACACATTTCACCCAAAGGGCAGGACATGTTAGTGCTTaGAAGAGAAACTTCAAACCA +
Preference number: 4 (lower is better)
Translates to: IPVTNCSLVQLTHFTQRAGHVSA*KRNFKP
Trigger: TGGTTTGAAGTTTCTCTTCCAAGCACTAACATGTCC...TGCCCTTTGGGTGAAATGTGTTAGCTGGACTAGGGAACAATTAGTAACAGGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCACAGACTTCATCAATCTaGAAAATGAAGGCAGACCAC +
Preference number: 4 (lower is better)
Translates to: WHLTTVSVNTWILFTVNSQTSSI*KMKADH
Trigger: GTGGTCTGCCTTCATTTTCCAGATTGATGAAGTCTG...TGAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392901.10
CDS-3UTR TCA 90 bp TTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAAGCTCCAGTTGCTGTTTaGGGTTGTGTATTTCTTTGT +
Preference number: 4 (lower is better)
Translates to: FMASNNCVCQHMDPFHCQAPVAV*GCVFLC
Trigger: ACAAAGAAATACACAACCTCAAACAGCAACTGGAGC...TTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR TCA 90 bp ACAGCAGTGAAGCAAGAAAAATGTGTGCTTGTCACTTATCTTCACCATACTGTATCATCCTCCTTGTGTTaGGTTGGATCTTTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: TAVKQEKCVLVTYLHHTVSSSLC*VGSFSA
Trigger: TGCTGAAAAAGATCCAACTCAACACAAGGAGGATGA...TACAGTATGGTGAAGATAAGTGACAAGCACACATTTTTCTTGCTTCACTGCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp TGTTGTTCCACAACGAGTGTAACTGAACAGGTAGAGTATGCATTTAGAAAAATAATGGGACTACGAGTTTaGTGCCAGCTCCTGAGTTTT +
Preference number: 4 (lower is better)
Translates to: CCSTTSVTEQVEYAFRKIMGLRV*CQLLSF
Trigger: AAAACTCAGGAGCTGGCATCAAACTCGTAGTCCCAT...TATTTTTCTAAATGCATACTCTACCTGTTCAGTTACACTCGTTGTGGAACAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp TATTACAATAACCAGGTCAGCAGTGTGACTTCAACACAGAGCAGTTTACTCACCTTCACTGTGGTAGCCTaGAACATTGTATTTTTAGAG +
Preference number: 4 (lower is better)
Translates to: YYNNQVSSVTSTQSSLLTFTVVA*NIVFLE
Trigger: CTCTAAAAATACAATGTTTCAGGCTACCACAGTGAA...GGTGAGTAAACTGCTCTGTGTTGAAGTCACACTGCTGACCTGGTTATTGTAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp AGCAGGACGTATGTAAGTTTTGTGTGTGCAATAGCTATGAACATACCTTGCAGAGTAGGCAGAAAAAGGTaGGTGAATATCTTCCATCAA +
Preference number: 4 (lower is better)
Translates to: SRTYVSFVCAIAMNIPCRVGRKR*VNIFHQ
Trigger: TTGATGGAAGATATTCACTCACCTTTTTCTGCCTAC...TCTGCAAGGTATGTTCATAGCTATTGCACACACAAAACTTACATACGTCCTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp GTACCTCTATCTCTGTTCCTCACTCGGGCTATAAAATGCATCAACATTCGTTTTGTAGGCAGAAAAAGGTaGGTGAATATCTTCCATCAA +
Preference number: 4 (lower is better)
Translates to: VPLSLFLTRAIKCINIRFVGRKR*VNIFHQ
Trigger: TTGATGGAAGATATTCACTCACCTTTTTCTGCCTAC...AAAACGAATGTTGATGCATTTTATAGCCCGAGTGAGGAACAGAGATAGAGGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp CAGTCTACTGTAGAAAATAACTTGTATGCCACAGTACCCAACAATTTCCATGCTAGGAGCAATTATTGGTaGGTAGTTAGAGCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: QSTVENNLYATVPNNFHARSNYW*VVRAKA
Trigger: TGCTTTGGCTCTAACTACTCACCAATAATTGCTCCT...AGCATGGAAATTGTTGGGTACTGTGGCATACAAGTTATTTTCTACAGTAGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp TGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCTTTAATTAAAATCTTAAAGGCAGAACAAACATaGCTGGGTGTTCACATACCC +
Preference number: 4 (lower is better)
Translates to: CLRPAHIQKGASALIKILKAEQT*LGVHIP
Trigger: GGGTATGTGAACACCCAGTCATGTTTGTTCTGCCTT...TAAGATTTTAATTAAAGCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp AATGTCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGAAGGCAGAACAAACATaGCTGGGTGTTCACATACCC +
Preference number: 4 (lower is better)
Translates to: NVYSPCQYNNTNHVLIEKKAEQT*LGVHIP
Trigger: GGGTATGTGAACACCCAGTCATGTTTGTTCTGCCTT...CTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp CAGCCACCACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGTCCATTCTCTTTAGCTTGTTTTaGTCAATGAACATCTCTTGT +
Preference number: 4 (lower is better)
Translates to: QPPHFHVDFVCLLALLSILFSLF*SMNISC
Trigger: ACAAGAGATGTTCATTGAGCAAAACAAGCTAAAGAG...AATGGACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGGTGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp ATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCTGTTTCTGGTTGAGTTaGCTTTTCTTTCTTAGCACC +
Preference number: 4 (lower is better)
Translates to: MASNNCVCQHMDPFHCQFCFWLS*LFFLST
Trigger: GGTGCTAAGAAAGAAAAGGCAACTCAACCAGAAACA...GAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR GCA 90 bp GTACCTCTATCTCTGTTCCTCACTCGGGCTATAAAATGCATCAACATTCGTTTTATCTCTTCAACTGCTTaGCTCTTTAGATCTGTGACT +
Preference number: 4 (lower is better)
Translates to: VPLSLFLTRAIKCINIRFISSTA*LFRSVT
Trigger: AGTCACAGATCTAAAGAGGCAAGCAGTTGAAGAGAT...AAAACGAATGTTGATGCATTTTATAGCCCGAGTGAGGAACAGAGATAGAGGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp ATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCATCTCTTCAACTGCTTaGCTCTTTAGATCTGTGACT +
Preference number: 4 (lower is better)
Translates to: MASNNCVCQHMDPFHCQFISSTA*LFRSVT
Trigger: AGTCACAGATCTAAAGAGGCAAGCAGTTGAAGAGAT...GAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR GCA 90 bp TCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGGACTCGGGCTGTTGAATTCTaGCTCCAGAGTTTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: STALANITTLIMCLLKRTRAVEF*LQSFLV
Trigger: AACAAGAAAACTCTGGAGGCAGAATTCAACAGCCCG...AGTCCTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000355371.9
CDS-3UTR GCA 90 bp TTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTGTTTTCTGGTTCTCTaGTCTAAGGTCTTCATATTC +
Preference number: 4 (lower is better)
Translates to: FTSAFMASNNCVCQHMDPCFLVL*SKVFIF
Trigger: GAATATGAAGACCTTAGAGCAGAGAACCAGAAAACA...AGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR GCA 90 bp TGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCAGCTTCATCTCGTTCTTaGCTAATTTTGTCACACTTC +
Preference number: 4 (lower is better)
Translates to: WHLTTVSVNTWILFTVNSASSRS*LILSHF
Trigger: GAAGTGTGACAAAATTAGGCAAGAACGAGATGAAGC...TGAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR GCA 90 bp AATGTCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGGACTCTCTCAGAGCATaGAGGAGACTTGGTTGGTAT +
Preference number: 4 (lower is better)
Translates to: NVYSPCQYNNTNHVLIEKDSLRA*RRLGWY
Trigger: ATACCAACCAAGTCTCCTGCATGCTCTGAGAGAGTC...CTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp ACAGCAGTGAAGCAAGAAAAATGTGTGCTTGTCACTTATCTTCACCATACTGTATTCAGTTATTACATCTaGTCCCAGCTTGGCCATGTA +
Preference number: 4 (lower is better)
Translates to: TAVKQEKCVLVTYLHHTVFSYYI*SQLGHV
Trigger: TACATGGCCAAGCTGGGACCAGATGTAATAACTGAA...TACAGTATGGTGAAGATAAGTGACAAGCACACATTTTTCTTGCTTCACTGCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp ATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCTCTTCTTCAAGTTGCTaGGTGAGTTTTGCATTTTCG +
Preference number: 4 (lower is better)
Translates to: MASNNCVCQHMDPFHCQFSSSSC*VSFAFS
Trigger: CGAAAATGCAAAACTCACCCAGCAACTTGAAGAAGA...GAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CCA 90 bp TCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGGACTACACTGGCATGGATTTaGACTCTGAGGTGGCTAATA +
Preference number: 4 (lower is better)
Translates to: STALANITTLIMCLLKRTTLAWI*TLRWLI
Trigger: TATTAGCCACCTCAGAGTCCAAATCCATGCCAGTGT...AGTCCTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000355371.9
CDS-3UTR CCA 90 bp AGCAGGACGTATGTAAGTTTTGTGTGTGCAATAGCTATGAACATACCTTGCAGACTGTTTTTGTTACACTaGATACAGAACCCAACACTG +
Preference number: 4 (lower is better)
Translates to: SRTYVSFVCAIAMNIPCRLFLLH*IQNPTL
Trigger: CAGTGTTGGGTTCTGTATCCAGTGTAACAAAAACAG...TCTGCAAGGTATGTTCATAGCTATTGCACACACAAAACTTACATACGTCCTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000355371.9
CDS-3UTR CCA 90 bp ATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCCTGTTTTTGTTACACTaGATACAGAACCCAACACTG +
Preference number: 4 (lower is better)
Translates to: MASNNCVCQHMDPFHCQFLFLLH*IQNPTL
Trigger: CAGTGTTGGGTTCTGTATCCAGTGTAACAAAAACAG...GAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CCA 90 bp ACAGCAGTGAAGCAAGAAAAATGTGTGCTTGTCACTTATCTTCACCATACTGTACTCCTTGTGTTGAGTTaGATCTTTTTCAGCAACCTG +
Preference number: 4 (lower is better)
Translates to: TAVKQEKCVLVTYLHHTVLLVLS*IFFSNL
Trigger: CAGGTTGCTGAAAAAGATCCAACTCAACACAAGGAG...TACAGTATGGTGAAGATAAGTGACAAGCACACATTTTTCTTGCTTCACTGCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TTCTTTAATAGCAATGGCACAAAGTACCTCTATCTCTGTTCCTCACTCGGGCTAGTCTTCTTTGTTTTCTaGTTGAATTTCGCCTTCATC +
Preference number: 4 (lower is better)
Translates to: FFNSNGTKYLYLCSSLGLVFFVF*LNFAFI
Trigger: GATGAAGGCGAAATTCAACCAGAAAACAAAGAAGAC...TAGCCCGAGTGAGGAACAGAGATAGAGGTACTTTGTGCCATTGCTATTAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGGACTTTATGGATCAGCAGTTaGAGCTGTCTGTCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: STALANITTLIMCLLKRTLWISS*SCLSLS
Trigger: TGAGAGAGACAGACAGCTCCAACTGCTGATCCATAA...AGTCCTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp GTACCTCTATCTCTGTTCCTCACTCGGGCTATAAAATGCATCAACATTCGTTTTATAGCACAGAGCACATaGTTTACCAACTTACTACTG +
Preference number: 4 (lower is better)
Translates to: VPLSLFLTRAIKCINIRFIAQST*FTNLLL
Trigger: CAGTAGTAAGTTGGTAAACCATGTGCTCTGTGCTAT...AAAACGAATGTTGATGCATTTTATAGCCCGAGTGAGGAACAGAGATAGAGGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp AATGTCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGCTGCTGAAACTGCTGTaGGTGAGGACTTTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: NVYSPCQYNNTNHVLIEKLLKLL*VRTLFE
Trigger: CTCAAACAAAGTCCTCACCCACAGCAGTTTCAGCAG...CTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TGTTGTTCCACAACGAGTGTAACTGAACAGGTAGAGTATGCATTTAGAAAAATACAGTCAGAACTTCCATaGGACTGTTCAGCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: CCSTTSVTEQVEYAFRKIQSELP*DCSAAE
Trigger: TTCAGCAGCTGAACAGTCCCATGGAAGTTCTGACTG...TATTTTTCTAAATGCATACTCTACCTGTTCAGTTACACTCGTTGTGGAACAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp ATACCTGTTACTAATTGTTCCCTAGTCCAGCTAACACATTTCACCCAAAGGGCAAGTGATAATGACAGATaGTTATCCATTCTCGACAAC +
Preference number: 4 (lower is better)
Translates to: IPVTNCSLVQLTHFTQRASDNDR*LSILDN
Trigger: GTTGTCGAGAATGGATAACCATCTGTCATTATCACT...TGCCCTTTGGGTGAAATGTGTTAGCTGGACTAGGGAACAATTAGTAACAGGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp ACAGCAGTGAAGCAAGAAAAATGTGTGCTTGTCACTTATCTTCACCATACTGTATGCAGGAGACTTGGTTaGTATCACTCTAAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: TAVKQEKCVLVTYLHHTVCRRLG*YHSKLE
Trigger: TTCCAACTTAGAGTGATACCAACCAAGTCTCCTGCA...TACAGTATGGTGAAGATAAGTGACAAGCACACATTTTTCTTGCTTCACTGCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp AATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTTTGTTTGTTTTGTAAGCCAGTGTTaGGATTATAGCAGAGGAGTA +
Preference number: 4 (lower is better)
Translates to: NSVNFVLQPPHFHVDFVCFVSQC*DYSRGV
Trigger: TACTCCTCTGCTATAATCCCAACACTGGCTTACAAA...ACAAACAAAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp ATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCGTGTCTGTCAACACATaGATCCTTTTCACTGTCAAT +
Preference number: 4 (lower is better)
Translates to: MASNNCVCQHMDPFHCQFVSVNT*ILFTVN
Trigger: ATTGACAGTGAAAAGGATCCATGTGTTGACAGACAC...GAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CCA 90 bp TCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGGACTTGCATCCAATGCTACTaGGAGGCCAGTATTCCTTTT +
Preference number: 4 (lower is better)
Translates to: STALANITTLIMCLLKRTCIQCY*EASIPF
Trigger: AAAAGGAATACTGGCCTCCCAGTAGCATTGGATGCA...AGTCCTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615301.4
3UTR CAA 72 bp GCCCTTGCCAATATAACAACACTAATCATGTGCTTATaGAAAAGGACTTCCAAACATGTCAGGCTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: ALANITTLIMCL*KRTSKHVRLLV
Trigger: AACCAGAAGCCTGACATGTTTGGAAGTCCTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
3UTR CAA 72 bp ATGTGTGTAATTAACACTGACTATGGGACTACGAGTTaGATGCCAGCTCCTGAGTTTTCAGTTTATCTCAGT +
Preference number: 4 (lower is better)
Translates to: MCVINTDYGTTS*MPAPEFSVYLS
Trigger: ACTGAGATAAACTGAAAACTCAGGAGCTGGCATCAAACTCGTAGTCCCATAGTCAGTGTTAATTACACACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp TGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCATCTTTAATTTGCTTCTaGCACTGTACTGAGACACAA +
Preference number: 4 (lower is better)
Translates to: WHLTTVSVNTWILFTVNSSLICF*HCTETQ
Trigger: TTGTGTCTCAGTACAGTGTCAGAAGCAAATTAAAGA...TGAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR TCA 90 bp CAGTCTACTGTAGAAAATAACTTGTATGCCACAGTACCCAACAATTTCCATGCTGCTTGTTTTGCTCAATaGACATCTCTTGTGCAAATG +
Preference number: 4 (lower is better)
Translates to: QSTVENNLYATVPNNFHAACFAQ*TSLVQM
Trigger: CATTTGCACAAGAGATGTTCATTGAGCAAAACAAGC...AGCATGGAAATTGTTGGGTACTGTGGCATACAAGTTATTTTCTACAGTAGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp TTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAAGCTTGTTTTGCTCAATaGACATCTCTTGTGCAAATG +
Preference number: 4 (lower is better)
Translates to: FMASNNCVCQHMDPFHCQACFAQ*TSLVQM
Trigger: CATTTGCACAAGAGATGTTCATTGAGCAAAACAAGC...TTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR TCA 90 bp TATCTTCACCATACTGTACATAAGAACTCTGATAAAATATGGTACTTGTGCCACCTGACAGCTACATGCTaGGCCATGCTAACAAAACTA +
Preference number: 4 (lower is better)
Translates to: YLHHTVHKNSDKIWYLCHLTATC*AMLTKL
Trigger: TAGTTTTGTTAGCATGGCTCAGCATGTAGCTGTCAG...GTGGCACAAGTACCATATTTTATCAGAGTTCTTATGTACAGTATGGTGAAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp TTGAGCTTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGCTCTTTAGCTTGTTTTaGTCAATGAACATCTCTTGT +
Preference number: 4 (lower is better)
Translates to: LSFTSAFMASNNCVCQHMLFSLF*SMNISC
Trigger: ACAAGAGATGTTCATTGAGCAAAACAAGCTAAAGAG...CATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAAGCTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR GCA 90 bp TTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATGTTTCTGGTTGAGTTaGCTTTTCTTTCTTAGCACC +
Preference number: 4 (lower is better)
Translates to: FMASNNCVCQHMDPFHCQCFWLS*LFFLST
Trigger: GGTGCTAAGAAAGAAAAGGCAACTCAACCAGAAACA...TTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR GCA 90 bp TTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAAATCTCTTCAACTGCTTaGCTCTTTAGATCTGTGACT +
Preference number: 4 (lower is better)
Translates to: FMASNNCVCQHMDPFHCQISSTA*LFRSVT
Trigger: AGTCACAGATCTAAAGAGGCAAGCAGTTGAAGAGAT...TTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR GCA 90 bp TGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCTTTAATTAAAATCTTACGGGCTGTTGAATTCTaGCTCCAGAGTTTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: CLRPAHIQKGASALIKILRAVEF*LQSFLV
Trigger: AACAAGAAAACTCTGGAGGCAGAATTCAACAGCCCG...TAAGATTTTAATTAAAGCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000355371.9
CDS-3UTR GCA 90 bp ATACCTGTTACTAATTGTTCCCTAGTCCAGCTAACACATTTCACCCAAAGGGCAACAACACTAATCATGTaGTTATTGAAAAGGACTTCC +
Preference number: 4 (lower is better)
Translates to: IPVTNCSLVQLTHFTQRATTLIM*LLKRTS
Trigger: GGAAGTCCTTTTCAATAAGCACATGATTAGTGTTGT...TGCCCTTTGGGTGAAATGTGTTAGCTGGACTAGGGAACAATTAGTAACAGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp TACAATAACCAGGTCAGCAGTGTGACTTCAACACAGAGCAGTTTACTCACCTATACAACACTAATCATGTaGTTATTGAAAAGGACTTCC +
Preference number: 4 (lower is better)
Translates to: YNNQVSSVTSTQSSLLTYTTLIM*LLKRTS
Trigger: GGAAGTCCTTTTCAATAAGCACATGATTAGTGTTGT...ATAGGTGAGTAAACTGCTCTGTGTTGAAGTCACACTGCTGACCTGGTTATTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp TACAATAACCAGGTCAGCAGTGTGACTTCAACACAGAGCAGTTTACTCACCTATAATGTCTACAGCCCTTaGCAATATAACAACACTAAT +
Preference number: 4 (lower is better)
Translates to: YNNQVSSVTSTQSSLLTYNVYSP*QYNNTN
Trigger: ATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT...ATAGGTGAGTAAACTGCTCTGTGTTGAAGTCACACTGCTGACCTGGTTATTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp TGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCTTTAATTAAAATCTTACAATTTCCATGCTGCTaGAGTTTCTCCATCAAGAGG +
Preference number: 4 (lower is better)
Translates to: CLRPAHIQKGASALIKILQFPCC*SFSIKR
Trigger: CCTCTTGATGGAGAAACTGCAGCAGCATGGAAATTG...TAAGATTTTAATTAAAGCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp AATGTCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGCAATTTCCATGCTGCTaGAGTTTCTCCATCAAGAGG +
Preference number: 4 (lower is better)
Translates to: NVYSPCQYNNTNHVLIEKQFPCC*SFSIKR
Trigger: CCTCTTGATGGAGAAACTGCAGCAGCATGGAAATTG...CTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp AGCAGGACGTATGTAAGTTTTGTGTGTGCAATAGCTATGAACATACCTTGCAGAAGCAAGAAAAATGTGTaGTTGTCACTTATCTTCACC +
Preference number: 4 (lower is better)
Translates to: SRTYVSFVCAIAMNIPCRSKKNV*LSLIFT
Trigger: GGTGAAGATAAGTGACAAGCACACATTTTTCTTGCT...TCTGCAAGGTATGTTCATAGCTATTGCACACACAAAACTTACATACGTCCTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp ACAGCAGTGAAGCAAGAAAAATGTGTGCTTGTCACTTATCTTCACCATACTGTAGCTATGAACATACCTTaGAGATATAAGCACGGTTCT +
Preference number: 4 (lower is better)
Translates to: TAVKQEKCVLVTYLHHTVAMNIP*RYKHGS
Trigger: AGAACCGTGCTTATATCTGCAAGGTATGTTCATAGC...TACAGTATGGTGAAGATAAGTGACAAGCACACATTTTTCTTGCTTCACTGCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp TACAATAACCAGGTCAGCAGTGTGACTTCAACACAGAGCAGTTTACTCACCTATTGTAAGTTTTGTGTGTaGAATAGCTATGAACATACC +
Preference number: 4 (lower is better)
Translates to: YNNQVSSVTSTQSSLLTYCKFCV*NSYEHT
Trigger: GGTATGTTCATAGCTATTGCACACACAAAACTTACA...ATAGGTGAGTAAACTGCTCTGTGTTGAAGTCACACTGCTGACCTGGTTATTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp AATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTTTGTTTGTTGTTTTCTGGTTCTCTaGTCTAAGGTCTTCATATTC +
Preference number: 4 (lower is better)
Translates to: NSVNFVLQPPHFHVDFVCCFLVL*SKVFIF
Trigger: GAATATGAAGACCTTAGAGCAGAGAACCAGAAAACA...ACAAACAAAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp TTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAAGCTTCATCTCGTTCTTaGCTAATTTTGTCACACTTC +
Preference number: 4 (lower is better)
Translates to: FMASNNCVCQHMDPFHCQASSRS*LILSHF
Trigger: GAAGTGTGACAAAATTAGGCAAGAACGAGATGAAGC...TTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CCA 90 bp CAGTCTACTGTAGAAAATAACTTGTATGCCACAGTACCCAACAATTTCCATGCTTCTTCTTCAAGTTGCTaGGTGAGTTTTGCATTTTCG +
Preference number: 4 (lower is better)
Translates to: QSTVENNLYATVPNNFHASSSSC*VSFAFS
Trigger: CGAAAATGCAAAACTCACCCAGCAACTTGAAGAAGA...AGCATGGAAATTGTTGGGTACTGTGGCATACAAGTTATTTTCTACAGTAGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATCTTCTTCAAGTTGCTaGGTGAGTTTTGCATTTTCG +
Preference number: 4 (lower is better)
Translates to: FMASNNCVCQHMDPFHCQSSSSC*VSFAFS
Trigger: CGAAAATGCAAAACTCACCCAGCAACTTGAAGAAGA...TTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CCA 90 bp TGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCTTTAATTAAAATCTTAATTTGGACTCTGAGGTaGCTAATATCCCAGTTGGAC +
Preference number: 4 (lower is better)
Translates to: CLRPAHIQKGASALIKILIWTLR*LISQLD
Trigger: GTCCAACTGGGATATTAGCCACCTCAGAGTCCAAAT...TAAGATTTTAATTAAAGCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000355371.9
CDS-3UTR CCA 90 bp AATGTCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGATTTGGACTCTGAGGTaGCTAATATCCCAGTTGGAC +
Preference number: 4 (lower is better)
Translates to: NVYSPCQYNNTNHVLIEKIWTLR*LISQLD
Trigger: GTCCAACTGGGATATTAGCCACCTCAGAGTCCAAAT...CTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000355371.9
CDS-3UTR CCA 90 bp GTTTTCAGTTTATCTCAGTCTACTGTAGAAAATAACTTGTATGCCACAGTACCCACCTGGTCTTTGGTTTaGGGTTCATGTGTAGAAACA +
Preference number: 4 (lower is better)
Translates to: VFSLSQSTVENNLYATVPTWSLV*GSCVET
Trigger: TGTTTCTACACATGAACCCCAAACCAAAGACCAGGT...GGGTACTGTGGCATACAAGTTATTTTCTACAGTAGACTGAGATAAACTGAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TTAATAGCAATGGCACAAAGTACCTCTATCTCTGTTCCTCACTCGGGCTATAAAGTCTTCTTTGTTTTCTaGTTGAATTTCGCCTTCATC +
Preference number: 4 (lower is better)
Translates to: LIAMAQSTSISVPHSGYKVFFVF*LNFAFI
Trigger: GATGAAGGCGAAATTCAACCAGAAAACAAAGAAGAC...TTTATAGCCCGAGTGAGGAACAGAGATAGAGGTACTTTGTGCCATTGCTATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TTACCAACTTACTACTGTAAAATTCAAGGTTTGGACTTTCACCTCAGTTCTGTATTATGGATCAGCAGTTaGAGCTGTCTGTCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: LPTYYCKIQGLDFHLSSVLWISS*SCLSLS
Trigger: TGAGAGAGACAGACAGCTCCAACTGCTGATCCATAA...TACAGAACTGAGGTGAAAGTCCAAACCTTGAATTTTACAGTAGTAAGTTGGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp AATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTTTGTTTGTGTAAAATTCAAGGTTTaGACTTTCACCTCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: NSVNFVLQPPHFHVDFVCVKFKV*TFTSVL
Trigger: CAGAACTGAGGTGAAAGTCCAAACCTTGAATTTTAC...ACAAACAAAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR CAA 72 bp CATGGTTTACCAACTTACTACTGTAAAATTCAAGGTTaGGACTTTCACCTCAGTTCTGTATTCAGGCTACCA +
Preference number: 4 (lower is better)
Translates to: HGLPTYYCKIQG*DFHLSSVFRLP
Trigger: TGGTAGCCTGAATACAGAACTGAGGTGAAAGTCCAAACCTTGAATTTTACAGTAGTAAGTTGGTAAACCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp TTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATCTTTAATTTGCTTCTaGCACTGTACTGAGACACAA +
Preference number: 4 (lower is better)
Translates to: FMASNNCVCQHMDPFHCQSLICF*HCTETQ
Trigger: TTGTGTCTCAGTACAGTGTCAGAAGCAAATTAAAGA...TTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR TCA 90 bp AATGTCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGCTTCAAGTTGCTGGGTaGGTTTTGCATTTTCGTCTA +
Preference number: 4 (lower is better)
Translates to: NVYSPCQYNNTNHVLIEKLQVAG*VLHFRL
Trigger: TAGACGAAAATGCAAAACTCACCCAGCAACTTGAAG...CTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp CAGTCTACTGTAGAAAATAACTTGTATGCCACAGTACCCAACAATTTCCATGCTGCTCTTCTAATTCTTTaGCCTTTTGTTGATGCTGAA +
Preference number: 4 (lower is better)
Translates to: QSTVENNLYATVPNNFHAALLIL*PFVDAE
Trigger: TTCAGCATCAACAAAAGGTCAAAGAATTAGAAGAGC...AGCATGGAAATTGTTGGGTACTGTGGCATACAAGTTATTTTCTACAGTAGACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp TTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAAGCTCTTCTAATTCTTTaGCCTTTTGTTGATGCTGAA +
Preference number: 4 (lower is better)
Translates to: FMASNNCVCQHMDPFHCQALLIL*PFVDAE
Trigger: TTCAGCATCAACAAAAGGTCAAAGAATTAGAAGAGC...TTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR TCA 90 bp TATCTTCACCATACTGTACATAAGAACTCTGATAAAATATGGTACTTGTGCCACGCTCCAGTTGCTGTTTaGGGTTGTGTATTTCTTTGT +
Preference number: 4 (lower is better)
Translates to: YLHHTVHKNSDKIWYLCHAPVAV*GCVFLC
Trigger: ACAAAGAAATACACAACCTCAAACAGCAACTGGAGC...GTGGCACAAGTACCATATTTTATCAGAGTTCTTATGTACAGTATGGTGAAGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp TGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCTTTAATTAAAATCTTATCTTTGTTTTCTGGTTaGATTTCGCCTTCATCCTCC +
Preference number: 4 (lower is better)
Translates to: CLRPAHIQKGASALIKILSLFSG*ISPSSS
Trigger: GGAGGATGAAGGCGAAATTCAACCAGAAAACAAAGA...TAAGATTTTAATTAAAGCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp TCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGGACTTGCTACTTACAAAAGTaGCACCAGAAAAGAACCTGT +
Preference number: 4 (lower is better)
Translates to: STALANITTLIMCLLKRTCYLQK*HQKRTC
Trigger: ACAGGTTCTTTTCTGGTGTCACTTTTGTAAGTAGCA...AGTCCTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp ACAGCAGTGAAGCAAGAAAAATGTGTGCTTGTCACTTATCTTCACCATACTGTACAGACTATCATTTACTaGACACACAACCAAAAACTG +
Preference number: 4 (lower is better)
Translates to: TAVKQEKCVLVTYLHHTVQTIIY*THNQKL
Trigger: CAGTTTTTGGTTGTGTGTTCAGTAAATGATAGTCTG...TACAGTATGGTGAAGATAAGTGACAAGCACACATTTTTCTTGCTTCACTGCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp TCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGGACTTTATTCTCAAAGCTATaGTTTGAAACTGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: STALANITTLIMCLLKRTLFSKL*FETGSG
Trigger: GCCTGAGCCAGTTTCAAATCATAGCTTTGAGAATAA...AGTCCTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp TCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGGACTGCTTCATCTCGTTCTTaGCTAATTTTGTCACACTTG +
Preference number: 4 (lower is better)
Translates to: STALANITTLIMCLLKRTASSRS*LILSHL
Trigger: CAAGTGTGACAAAATTAGGCAAGAACGAGATGAAGC...AGTCCTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260777.14
CDS-3UTR GCA 90 bp TGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCACTCTTTAGCTTGTTTTaGTCAATGAACATCTCTTGT +
Preference number: 4 (lower is better)
Translates to: WHLTTVSVNTWILFTVNSLFSLF*SMNISC
Trigger: ACAAGAGATGTTCATTGAGCAAAACAAGCTAAAGAG...TGAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR GCA 90 bp AATGTCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGCAACAATTTCCATGCTaGTGCAGTTTCTCCATCAAG +
Preference number: 4 (lower is better)
Translates to: NVYSPCQYNNTNHVLIEKQQFPC*CSFSIK
Trigger: CTTGATGGAGAAACTGCAGCAGCATGGAAATTGTTG...CTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp CAGTCTACTGTAGAAAATAACTTGTATGCCACAGTACCCAACAATTTCCATGCTAGCAAGAAAAATGTGTaGTTGTCACTTATCTTCACC +
Preference number: 4 (lower is better)
Translates to: QSTVENNLYATVPNNFHASKKNV*LSLIFT
Trigger: GGTGAAGATAAGTGACAAGCACACATTTTTCTTGCT...AGCATGGAAATTGTTGGGTACTGTGGCATACAAGTTATTTTCTACAGTAGACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp TCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGGACTGCTATGAACATACCTTaGAGATATAAGCACGGTTCT +
Preference number: 4 (lower is better)
Translates to: STALANITTLIMCLLKRTAMNIP*RYKHGS
Trigger: AGAACCGTGCTTATATCTGCAAGGTATGTTCATAGC...AGTCCTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp GTACCTCTATCTCTGTTCCTCACTCGGGCTATAAAATGCATCAACATTCGTTTTCTCAAGGTTATTAAATaGCCAGTTATTCATACCACA +
Preference number: 4 (lower is better)
Translates to: VPLSLFLTRAIKCINIRFLKVIK*PVIHTT
Trigger: TGTGGTATGAATAACTGGGCATTTAATAACCTTGAG...AAAACGAATGTTGATGCATTTTATAGCCCGAGTGAGGAACAGAGATAGAGGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp AATGTCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGTCTTTTTCAGCAACCTaGTCTTTGGTTTGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: NVYSPCQYNNTNHVLIEKSFSAT*SLVWGS
Trigger: TGAACCCCAAACCAAAGACCAGGTTGCTGAAAAAGA...CTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TTACCAACTTACTACTGTAAAATTCAAGGTTTGGACTTTCACCTCAGTTCTGTACTCCTTGTGTTGAGTTaGATCTTTTTCAGCAACCTG +
Preference number: 4 (lower is better)
Translates to: LPTYYCKIQGLDFHLSSVLLVLS*IFFSNL
Trigger: CAGGTTGCTGAAAAAGATCCAACTCAACACAAGGAG...TACAGAACTGAGGTGAAAGTCCAAACCTTGAATTTTACAGTAGTAAGTTGGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGGACTGGACATGTTAGTGCTTaGAAGAGAAACTTCAAACCA +
Preference number: 4 (lower is better)
Translates to: STALANITTLIMCLLKRTGHVSA*KRNFKP
Trigger: TGGTTTGAAGTTTCTCTTCCAAGCACTAACATGTCC...AGTCCTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp AATGTCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGTGCAGGAGACTTGGTTaGTATCACTCTAAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: NVYSPCQYNNTNHVLIEKCRRLG*YHSKLE
Trigger: TTCCAACTTAGAGTGATACCAACCAAGTCTCCTGCA...CTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
3UTR CAA 72 bp GTTTTCAGTTTATCTCAGTCTACTGTAGAAAATAACTaGTATGCCACAGTACCCAACAATTTCCATGCTGCT +
Preference number: 4 (lower is better)
Translates to: VFSLSQSTVENN*YATVPNNFHAA
Trigger: AGCAGCATGGAAATTGTTGGGTACTGTGGCATACAAGTTATTTTCTACAGTAGACTGAGATAAACTGAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp TTACCAACTTACTACTGTAAAATTCAAGGTTTGGACTTTCACCTCAGTTCTGTAGCTTGTTTTGCTCAATaGACATCTCTTGTGCAAATG +
Preference number: 4 (lower is better)
Translates to: LPTYYCKIQGLDFHLSSVACFAQ*TSLVQM
Trigger: CATTTGCACAAGAGATGTTCATTGAGCAAAACAAGC...TACAGAACTGAGGTGAAAGTCCAAACCTTGAATTTTACAGTAGTAAGTTGGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp TTACCAACTTACTACTGTAAAATTCAAGGTTTGGACTTTCACCTCAGTTCTGTATGCTACTTACAAAAGTaGCACCAGAAAAGAACCTGT +
Preference number: 4 (lower is better)
Translates to: LPTYYCKIQGLDFHLSSVCYLQK*HQKRTC
Trigger: ACAGGTTCTTTTCTGGTGTCACTTTTGTAAGTAGCA...TACAGAACTGAGGTGAAAGTCCAAACCTTGAATTTTACAGTAGTAAGTTGGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp AATGTCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGTGCTTGATGAGTCTTTaGAGGTCAGTGATAATGACA +
Preference number: 4 (lower is better)
Translates to: NVYSPCQYNNTNHVLIEKCLMSL*RSVIMT
Trigger: TGTCATTATCACTGACCTTCAAAGACTCATCAAGCA...CTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp TGTTGTTCCACAACGAGTGTAACTGAACAGGTAGAGTATGCATTTAGAAAAATATGCTTGATGAGTCTTTaGAGGTCAGTGATAATGACA +
Preference number: 4 (lower is better)
Translates to: CCSTTSVTEQVEYAFRKICLMSL*RSVIMT
Trigger: TGTCATTATCACTGACCTTCAAAGACTCATCAAGCA...TATTTTTCTAAATGCATACTCTACCTGTTCAGTTACACTCGTTGTGGAACAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp TCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGGACTTGTTCACATACCCTTTaGAAAATACACACACACACA +
Preference number: 4 (lower is better)
Translates to: STALANITTLIMCLLKRTCSHTL*KIHTHT
Trigger: TGTGTGTGTGTGTATTTTTCAAAGGGTATGTGAACA...AGTCCTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp AATGTCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGATCTCTTCAACTGCTTaGCTCTTTAGATCTGTGACT +
Preference number: 4 (lower is better)
Translates to: NVYSPCQYNNTNHVLIEKISSTA*LFRSVT
Trigger: AGTCACAGATCTAAAGAGGCAAGCAGTTGAAGAGAT...CTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp ACAGCAGTGAAGCAAGAAAAATGTGTGCTTGTCACTTATCTTCACCATACTGTAACTCGGGCTATAAAATaGATCAACATTCGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: TAVKQEKCVLVTYLHHTVTRAIK*INIRFS
Trigger: AGAAAAACGAATGTTGATGCATTTTATAGCCCGAGT...TACAGTATGGTGAAGATAAGTGACAAGCACACATTTTTCTTGCTTCACTGCTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp GTTTTCAGTTTATCTCAGTCTACTGTAGAAAATAACTTGTATGCCACAGTACCCGTAAAATTCAAGGTTTaGACTTTCACCTCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: VFSLSQSTVENNLYATVPVKFKV*TFTSVL
Trigger: CAGAACTGAGGTGAAAGTCCAAACCTTGAATTTTAC...GGGTACTGTGGCATACAAGTTATTTTCTACAGTAGACTGAGATAAACTGAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CCA 90 bp TGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCTTTAATTAAAATCTTATTTGTAAGCCAGTGTTaGGATTATAGCAGAGGAGTA +
Preference number: 4 (lower is better)
Translates to: CLRPAHIQKGASALIKILFVSQC*DYSRGV
Trigger: TACTCCTCTGCTATAATCCCAACACTGGCTTACAAA...TAAGATTTTAATTAAAGCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp TGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCTTTAATTAAAATCTTATCTTTAATTTGCTTCTaGCACTGTACTGAGACACAA +
Preference number: 4 (lower is better)
Translates to: CLRPAHIQKGASALIKILSLICF*HCTETQ
Trigger: TTGTGTCTCAGTACAGTGTCAGAAGCAAATTAAAGA...TAAGATTTTAATTAAAGCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR TCA 90 bp AATGTCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGCAGACTATCATTTACTaGACACACAACCAAAAACTG +
Preference number: 4 (lower is better)
Translates to: NVYSPCQYNNTNHVLIEKQTIIY*THNQKL
Trigger: CAGTTTTTGGTTGTGTGTTCAGTAAATGATAGTCTG...CTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp TTACCAACTTACTACTGTAAAATTCAAGGTTTGGACTTTCACCTCAGTTCTGTACTCTTTAGCTTGTTTTaGTCAATGAACATCTCTTGT +
Preference number: 4 (lower is better)
Translates to: LPTYYCKIQGLDFHLSSVLFSLF*SMNISC
Trigger: ACAAGAGATGTTCATTGAGCAAAACAAGCTAAAGAG...TACAGAACTGAGGTGAAAGTCCAAACCTTGAATTTTACAGTAGTAAGTTGGTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp TTACCAACTTACTACTGTAAAATTCAAGGTTTGGACTTTCACCTCAGTTCTGTAAATGTCTACAGCCCTTaGCAATATAACAACACTAAT +
Preference number: 4 (lower is better)
Translates to: LPTYYCKIQGLDFHLSSVNVYSP*QYNNTN
Trigger: ATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT...TACAGAACTGAGGTGAAAGTCCAAACCTTGAATTTTACAGTAGTAAGTTGGTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp AATGTCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGAATGTCTACAGCCCTTaGCAATATAACAACACTAAT +
Preference number: 4 (lower is better)
Translates to: NVYSPCQYNNTNHVLIEKNVYSP*QYNNTN
Trigger: ATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT...CTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR GCA 90 bp TATCTTCACCATACTGTACATAAGAACTCTGATAAAATATGGTACTTGTGCCACCTCAAGGTTATTAAATaGCCAGTTATTCATACCACA +
Preference number: 4 (lower is better)
Translates to: YLHHTVHKNSDKIWYLCHLKVIK*PVIHTT
Trigger: TGTGGTATGAATAACTGGGCATTTAATAACCTTGAG...GTGGCACAAGTACCATATTTTATCAGAGTTCTTATGTACAGTATGGTGAAGATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS GCA 90 bp TCCCGTTCAGGGGGTGGAGGAACGAGGGCGGGTCGGCAGCCGCTATaGCAGCCTGTGGCTGCCGGCGCGGCAGGACGCGCTGGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: SRSGGGGTRAGRQPL*QPVAAGAAGRAGGR
Trigger: CCTCCCACCAGCGCGTCCTGCCGCGCCGGCAGCCACAGGCTGGCATAGCGGCTGCCGACCCGCCCTCGTTCCTCCACCCCCTGAACGGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000392903.3
CDS TCA 90 bp TGGATCCGCTCCCGCTCCTCCTCCTCCTGGCGCGGAGCGCGCGAGTaGGATCATCCCCACGCACCTACTCGGCGGCTGCGGCCGCTTCAC +
Preference number: 5 (lower is better)
Translates to: WIRSRSSSSWRGARE*DHPHAPTRRLRPLH
Trigger: GTGAAGCGGCCGCAGCCGCCGAGTAGGTGCGTGGGGATGATCTCACTCGCGCGCTCCGCGCCAGGAGGAGGAGGAGCGGGAGCGGATCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000392903.3
ENST00000615301.4
CDS TCA 90 bp GAGGCCCCGGCCTCCGTCGACGGAAGCTGTGGGAGATGGGCTGCGTaGGGTGCCGGGTCCAGGCTCACAGGAGGAGAGCTCCAGGAGTCC +
Preference number: 5 (lower is better)
Translates to: EAPASVDGSCGRWAA*GAGSRLTGGELQES
Trigger: GGACTCCTGGAGCTCTCCTCCTGTGAGCCTGGACCCGGCACCTCACGCAGCCCATCTCCCACAGCTTCCGTCGACGGAGGCCGGGGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392901.10
CDS GCA 90 bp CCCGGCCTCCGTCGACGGAAGCTGTGGGAGATGGGCTGCGTGAGGTaGCGGGTCCAGGCTCACAGGAGGAGAGCTCCAGGAGTCCCTAGA +
Preference number: 5 (lower is better)
Translates to: PGLRRRKLWEMGCVR*RVQAHRRRAPGVPR
Trigger: TCTAGGGACTCCTGGAGCTCTCCTCCTGTGAGCCTGGACCCGGCACCTCACGCAGCCCATCTCCCACAGCTTCCGTCGACGGAGGCCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392901.10
CDS CCA 90 bp GAAAAAGCAAGATGCCGGTGGCTTGCGGCTCCACTACCCGGAAGTTaGATCCGCTCCCGCTCCTCCTCCTCCTGGCGCGGAGCGCGCGAG +
Preference number: 5 (lower is better)
Translates to: EKARCRWLAAPLPGS*IRSRSSSSWRGARE
Trigger: CTCGCGCGCTCCGCGCCAGGAGGAGGAGGAGCGGGAGCGGATCCAACTTCCGGGTAGTGGAGCCGCAAGCCACCGGCATCTTGCTTTTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000392903.3
ENST00000615301.4
CDS GCA 90 bp AGGCTCACAGGAGGAGAGCTCCAGGAGTCCCTAGAGCGCCAGCCCTaGCTCCTTTCTAGCCCTAGCACCTGGCCCTCGCCTCGCCTCCTA +
Preference number: 5 (lower is better)
Translates to: RLTGGELQESLERQP*LLSSPSTWPSPRLL
Trigger: TAGGAGGCGAGGCGAGGGCCAGGTGCTAGGGCTAGAAAGGAGGCAGGGCTGGCGCTCTAGGGACTCCTGGAGCTCTCCTCCTGTGAGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392901.10
CDS CCA 90 bp TCCACCTCCCGGACTCAGGGACGCGAGTTCAGAGAAAACCGGCTGTaGGTTCGCAGCGTGTGTGGGAACTCCACTTTGGACGCTTCCCGG +
Preference number: 5 (lower is better)
Translates to: STSRTQGREFRENRL*VRSVCGNSTLDASR
Trigger: CCGGGAAGCGTCCAAAGTGGAGTTCCCACACACGCTGCGAACCCACAGCCGGTTTTCTCTGAACTCGCGTCCCTGAGTCCGGGAGGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000392903.3
CDS CCA 90 bp GGGACGCGAGTTCAGAGAAAACCGGCTGTGGGTTCGCAGCGTGTGTaGGAACTCCACTTTGGACGCTTCCCGGGGGTCGCTCCCAAAGAA +
Preference number: 5 (lower is better)
Translates to: GTRVQRKPAVGSQRV*ELHFGRFPGVAPKE
Trigger: TTCTTTGGGAGCGACCCCCGGGAAGCGTCCAAAGTGGAGTTCCCACACACGCTGCGAACCCACAGCCGGTTTTCTCTGAACTCGCGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000392903.3
CDS CCA 90 bp GAGAAAACCGGCTGTGGGTTCGCAGCGTGTGTGGGAACTCCACTTTaGACGCTTCCCGGGGGTCGCTCCCAAAGAACCACAGAGGTAGAG +
Preference number: 5 (lower is better)
Translates to: EKTGCGFAACVGTPL*TLPGGRSQRTTEVE
Trigger: CTCTACCTCTGTGGTTCTTTGGGAGCGACCCCCGGGAAGCGTCCAAAGTGGAGTTCCCACACACGCTGCGAACCCACAGCCGGTTTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000392903.3
CDS-3UTR CAA 90 bp AGCCGAAACAGGAGCATCCTCTGGATAGGGCTGTACACACCCCAGGTTCCAGCCAGGGATCGGATAGGATaGGGAGGTGGAGGGGGAAGT +
Preference number: 5 (lower is better)
Translates to: SRNRSILWIGLYTPQVPARDRIG*GGGGGS
Trigger: ACTTCCCCCTCCACCTCCCAATCCTATCCGATCCCT...GGCTGGAACCTGGGGTGTGTACAGCCCTATCCAGAGGATGCTCCTGTTTCGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TCCTATTTGGGATCCCTTGCTTTGGTTGACAGTGTCACCCCAGCCAGGGGCAAATGTGGGAACTCCACTTaGGACGCTTCCCGGGGGTCG +
Preference number: 5 (lower is better)
Translates to: SYLGSLALVDSVTPARGKCGNST*DASRGS
Trigger: CGACCCCCGGGAAGCGTCCAAAGTGGAGTTCCCACA...TTTGCCCCTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260777.14
CDS-3UTR CAA 90 bp AGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTTCCGAGCTGTTCATTTaGGCGGGTGGGGCCGGGAAT +
Preference number: 5 (lower is better)
Translates to: SHTISISRPGGLKYGAVSSELFI*AGGAGN
Trigger: ATTCCCGGCCCCACCCGCCAAAATGAACAGCTCGGA...AGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp CTGTGGGTGAGGACTTTGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCAGGCTGCGGAGGCACTaGAGGCTGCTGCGGCTAGGG +
Preference number: 5 (lower is better)
Translates to: LWVRTLFETSSHTKGCKCRLRRH*RLLRLG
Trigger: CCCTAGCCGCAGCAGCCTCAAGTGCCTCCGCAGCCT...GCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACAAAGTCCTCACCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp AGCCAAAGCATCCATCCTCCGTACTCAGGGCAAACTATGCTGGGTGCTAATAGCCAAGATGCCGGTGGCTaGCGGCTCCACTACCCGGAA +
Preference number: 5 (lower is better)
Translates to: SQSIHPPYSGQTMLGANSQDAGG*RLHYPE
Trigger: TTCCGGGTAGTGGAGCCGCAAGCCACCGGCATCTTG...GCTATTAGCACCCAGCATAGTTTGCCCTGAGTACGGAGGATGGATGCTTTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000615301.4
CDS GCA 90 bp TATTCGCCTATTGCTTGCTCCTTCAGACTGGTAATGAGCTGCAGCTaGTTCTCTTCGTCCGAGCTGTTCATTTTGGCGGGTGGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: YSPIACSFRLVMSCS*FSSSELFILAGGAG
Trigger: CCCGGCCCCACCCGCCAAAATGAACAGCTCGGACGAAGAGAAGCAGCTGCAGCTCATTACCAGTCTGAAGGAGCAAGCAATAGGCGAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355371.9
ENST00000392903.3
ENST00000615301.4
CDS-3UTR CAA 90 bp AGCCGAAACAGGAGCATCCTCTGGATAGGGCTGTACACACCCCAGGTTCCAGCCCTGTGGGTGAGGACTTaGTTTGAGACCAGCTCACAT +
Preference number: 5 (lower is better)
Translates to: SRNRSILWIGLYTPQVPALWVRT*FETSSH
Trigger: ATGTGAGCTGGTCTCAAACAAAGTCCTCACCCACAG...GGCTGGAACCTGGGGTGTGTACAGCCCTATCCAGAGGATGCTCCTGTTTCGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp AGCCGAAACAGGAGCATCCTCTGGATAGGGCTGTACACACCCCAGGTTCCAGCCCAGCTCCAGGTTTACTaGCATCTCCTCATACTCTTC +
Preference number: 5 (lower is better)
Translates to: SRNRSILWIGLYTPQVPAQLQVY*HLLILF
Trigger: GAAGAGTATGAGGAGATGCAAGTAAACCTGGAGCTG...GGCTGGAACCTGGGGTGTGTACAGCCCTATCCAGAGGATGCTCCTGTTTCGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp ATGTCTTCCTATTTGGGATCCCTTGCTTTGGTTGACAGTGTCACCCCAGCCAGGAGGGATCGGATAGGATaGGGAGGTGGAGGGGGAAGT +
Preference number: 5 (lower is better)
Translates to: MSSYLGSLALVDSVTPARRDRIG*GGGGGS
Trigger: ACTTCCCCCTCCACCTCCCAATCCTATCCGATCCCT...CCTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGAAGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp AGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTTTGGGATCCCTTGCTTaGGTTGACAGTGTCACCCCA +
Preference number: 5 (lower is better)
Translates to: SHTISISRPGGLKYGAVSLGSLA*VDSVTP
Trigger: TGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAA...AGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp AGCCGAAACAGGAGCATCCTCTGGATAGGGCTGTACACACCCCAGGTTCCAGCCGAGCATGCAGGAGACTaGGTTGGTATCACTCTAAGT +
Preference number: 5 (lower is better)
Translates to: SRNRSILWIGLYTPQVPAEHAGD*VGITLS
Trigger: ACTTAGAGTGATACCAACCAAGTCTCCTGCATGCTC...GGCTGGAACCTGGGGTGTGTACAGCCCTATCCAGAGGATGCTCCTGTTTCGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS TCA 90 bp AGGTGGAGGGGGAAGTGGTGGTGGAGGAGGAGGTGGTGGAGGTACTaGATTCTCAGACTGGTTCACTCGTTTCTGGAGTTCATCAACAGA +
Preference number: 5 (lower is better)
Translates to: RWRGKWWWRRRWWRY*ILRLVHSFLEFINR
Trigger: TCTGTTGATGAACTCCAGAAACGAGTGAACCAGTCTGAGAATTCAGTACCTCCACCACCTCCTCCTCCACCACCACTTCCCCCTCCACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000392901.10
ENST00000392903.3
ENST00000497044.5
ENST00000615301.4
CDS-3UTR CAA 90 bp AGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTTCGAAGATTCTGGCTTaGTCTTCGGTCTGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: SHTISISRPGGLKYGAVSSKILA*SSVWLS
Trigger: AGACAGCCAGACCGAAGACAAAGCCAGAATCTTCGA...AGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp ACTCAGGGCAAACTATGCTGGGTGCTAATAGCCCTGTTGATGCCTGCCAGTCAGGTGCTAATAGCCCTGTaGATGCCTGCCAGTCAGAAC +
Preference number: 5 (lower is better)
Translates to: TQGKLCWVLIALLMPASQVLIAL*MPASQN
Trigger: GTTCTGACTGGCAGGCATCAACAGGGCTATTAGCAC...CTGACTGGCAGGCATCAACAGGGCTATTAGCACCCAGCATAGTTTGCCCTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp AGCCAAAGCATCCATCCTCCGTACTCAGGGCAAACTATGCTGGGTGCTAATAGCACATCTGGTCCCAGCTaGGCCATGTACAACATGCTG +
Preference number: 5 (lower is better)
Translates to: SQSIHPPYSGQTMLGANSTSGPS*AMYNML
Trigger: CAGCATGTTGTACATGGCCAAGCTGGGACCAGATGT...GCTATTAGCACCCAGCATAGTTTGCCCTGAGTACGGAGGATGGATGCTTTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp AGCCGAAACAGGAGCATCCTCTGGATAGGGCTGTACACACCCCAGGTTCCAGCCTTCATCCTCCTTGTGTaGAGTTGGATCTTTTTCAGC +
Preference number: 5 (lower is better)
Translates to: SRNRSILWIGLYTPQVPAFILLV*SWIFFS
Trigger: GCTGAAAAAGATCCAACTCAACACAAGGAGGATGAA...GGCTGGAACCTGGGGTGTGTACAGCCCTATCCAGAGGATGCTCCTGTTTCGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp AGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTCTAAATGTGTGTGAGTaGCATGCTGGCAGACAGATC +
Preference number: 5 (lower is better)
Translates to: SHTISISRPGGLKYGAVSLNVCE*HAGRQI
Trigger: GATCTGTCTGCCAGCATGCAACTCACACACATTTAG...AGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTGTGGGAACTCCACTTaGGACGCTTCCCGGGGGTCG +
Preference number: 5 (lower is better)
Translates to: FTSAFMASNNCVCQHMDPCGNST*DASRGS
Trigger: CGACCCCCGGGAAGCGTCCAAAGTGGAGTTCCCACA...AGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392903.3
CDS-3UTR CAA 90 bp TTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTCAAGATGCCGGTGGCTaGCGGCTCCACTACCCGGAA +
Preference number: 5 (lower is better)
Translates to: FTSAFMASNNCVCQHMDPQDAGG*RLHYPE
Trigger: TTCCGGGTAGTGGAGCCGCAAGCCACCGGCATCTTG...AGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392903.3
CDS-3UTR CAA 90 bp AGCCAAAGCATCCATCCTCCGTACTCAGGGCAAACTATGCTGGGTGCTAATAGCTCGAAGATTCTGGCTTaGTCTTCGGTCTGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: SQSIHPPYSGQTMLGANSSKILA*SSVWLS
Trigger: AGACAGCCAGACCGAAGACAAAGCCAGAATCTTCGA...GCTATTAGCACCCAGCATAGTTTGCCCTGAGTACGGAGGATGGATGCTTTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TCCTATTTGGGATCCCTTGCTTTGGTTGACAGTGTCACCCCAGCCAGGGGCAAATCAGCAACCTGGTCTTaGGTTTGGGGTTCATGTGTA +
Preference number: 5 (lower is better)
Translates to: SYLGSLALVDSVTPARGKSATWS*VWGSCV
Trigger: TACACATGAACCCCAAACCAAAGACCAGGTTGCTGA...TTTGCCCCTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp ACTCAGGGCAAACTATGCTGGGTGCTAATAGCCCTGTTGATGCCTGCCAGTCAGTTTATGGATCAGCAGTaGGAGCTGTCTGTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: TQGKLCWVLIALLMPASQFMDQQ*ELSVSL
Trigger: GAGAGAGACAGACAGCTCCAACTGCTGATCCATAAA...CTGACTGGCAGGCATCAACAGGGCTATTAGCACCCAGCATAGTTTGCCCTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp CTGTGGGTGAGGACTTTGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCGGTCCTCGGGAGGCTTaGGACACAATCAATAGCATG +
Preference number: 5 (lower is better)
Translates to: LWVRTLFETSSHTKGCKCGPREA*DTINSM
Trigger: CATGCTATTGATTGTGTCCAAAGCCTCCCGAGGACC...GCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACAAAGTCCTCACCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TCCTATTTGGGATCCCTTGCTTTGGTTGACAGTGTCACCCCAGCCAGGGGCAAACCTATTTGGGATCCCTaGCTTTGGTTGACAGTGTCA +
Preference number: 5 (lower is better)
Translates to: SYLGSLALVDSVTPARGKPIWDP*LWLTVS
Trigger: TGACACTGTCAACCAAAGCAAGGGATCCCAAATAGG...TTTGCCCCTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp AGCCGAAACAGGAGCATCCTCTGGATAGGGCTGTACACACCCCAGGTTCCAGCCCGTTCTTGCCTAATTTaGTCACACTTCTCCTTTGTT +
Preference number: 5 (lower is better)
Translates to: SRNRSILWIGLYTPQVPARSCLI*SHFSFV
Trigger: AACAAAGGAGAAGTGTGACAAAATTAGGCAAGAACG...GGCTGGAACCTGGGGTGTGTACAGCCCTATCCAGAGGATGCTCCTGTTTCGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp ATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCTCCACTACCCGGAAGTaGGATCCGCTCCCGCTCCTC +
Preference number: 5 (lower is better)
Translates to: MASNNCVCQHMDPFHCQFSTTRK*DPLPLL
Trigger: GAGGAGCGGGAGCGGATCCAACTTCCGGGTAGTGGA...GAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392903.3
CDS-3UTR CAA 90 bp TTGAGCTTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGTCCGAGCTGTTCATTTaGGCGGGTGGGGCCGGGAAT +
Preference number: 5 (lower is better)
Translates to: LSFTSAFMASNNCVCQHMSELFI*AGGAGN
Trigger: ATTCCCGGCCCCACCCGCCAAAATGAACAGCTCGGA...CATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAAGCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392903.3
CDS-3UTR CAA 90 bp AGCCGAAACAGGAGCATCCTCTGGATAGGGCTGTACACACCCCAGGTTCCAGCCTTTCTTTATTTAGCTTaGTTGCCAAAGCTTCAGCAC +
Preference number: 5 (lower is better)
Translates to: SRNRSILWIGLYTPQVPAFLYLA*LPKLQH
Trigger: GTGCTGAAGCTTTGGCAACAAAGCTAAATAAAGAAA...GGCTGGAACCTGGGGTGTGTACAGCCCTATCCAGAGGATGCTCCTGTTTCGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp AGCCAAAGCATCCATCCTCCGTACTCAGGGCAAACTATGCTGGGTGCTAATAGCAACACTGGCATGGATTaGGACTCTGAGGTGGCTAAT +
Preference number: 5 (lower is better)
Translates to: SQSIHPPYSGQTMLGANSNTGMD*DSEVAN
Trigger: ATTAGCCACCTCAGAGTCCAAATCCATGCCAGTGTT...GCTATTAGCACCCAGCATAGTTTGCCCTGAGTACGGAGGATGGATGCTTTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000355371.9
CDS-3UTR CAA 90 bp AGCCAAAGCATCCATCCTCCGTACTCAGGGCAAACTATGCTGGGTGCTAATAGCTATGGGACTACGAGTTaGATGCCAGCTCCTGAGTTT +
Preference number: 5 (lower is better)
Translates to: SQSIHPPYSGQTMLGANSYGTTS*MPAPEF
Trigger: AAACTCAGGAGCTGGCATCAAACTCGTAGTCCCATA...GCTATTAGCACCCAGCATAGTTTGCCCTGAGTACGGAGGATGGATGCTTTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp AGCCGAAACAGGAGCATCCTCTGGATAGGGCTGTACACACCCCAGGTTCCAGCCGTATATAAGCTAATGTaGTTCCACAACGAGTGTAAC +
Preference number: 5 (lower is better)
Translates to: SRNRSILWIGLYTPQVPAVYKLM*FHNECN
Trigger: GTTACACTCGTTGTGGAACAACATTAGCTTATATAC...GGCTGGAACCTGGGGTGTGTACAGCCCTATCCAGAGGATGCTCCTGTTTCGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp ATGTCTTCCTATTTGGGATCCCTTGCTTTGGTTGACAGTGTCACCCCAGCCAGGCTTCATATTCGCCTATaGCTTGCTCCTTCAGACTGG +
Preference number: 5 (lower is better)
Translates to: MSSYLGSLALVDSVTPARLHIRL*LAPSDW
Trigger: CCAGTCTGAAGGAGCAAGCAATAGGCGAATATGAAG...CCTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGAAGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TCCTATTTGGGATCCCTTGCTTTGGTTGACAGTGTCACCCCAGCCAGGGGCAAATGTCACACTTCTCCTTaGTTTTCTGGTTCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: SYLGSLALVDSVTPARGKCHTSP*FSGSLL
Trigger: GAGCAGAGAACCAGAAAACAAAGGAGAAGTGTGACA...TTTGCCCCTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS CCA 90 bp CACTGGATACAGAACCCAACACTGGCATGGATTTGGACTCTGAGGTaGCTAATATCCCAGTTGGACTACTGCTATCTGCTTCTGCTGTCA +
Preference number: 5 (lower is better)
Translates to: HWIQNPTLAWIWTLR*LISQLDYCYLLLLS
Trigger: TGACAGCAGAAGCAGATAGCAGTAGTCCAACTGGGATATTAGCCACCTCAGAGTCCAAATCCATGCCAGTGTTGGGTTCTGTATCCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000392901.10
ENST00000392903.3
ENST00000497044.5
CDS-3UTR CAA 90 bp CAGTCTACTGTAGAAAATAACTTGTATGCCACAGTACCCAACAATTTCCATGCTTCCACTACCCGGAAGTaGGATCCGCTCCCGCTCCTC +
Preference number: 5 (lower is better)
Translates to: QSTVENNLYATVPNNFHASTTRK*DPLPLL
Trigger: GAGGAGCGGGAGCGGATCCAACTTCCGGGTAGTGGA...AGCATGGAAATTGTTGGGTACTGTGGCATACAAGTTATTTTCTACAGTAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000615301.4
CDS-3UTR CAA 90 bp ACTCAGGGCAAACTATGCTGGGTGCTAATAGCCCTGTTGATGCCTGCCAGTCAGGGCTTCATCTCGTTCTaGCCTAATTTTGTCACACTT +
Preference number: 5 (lower is better)
Translates to: TQGKLCWVLIALLMPASQGFISF*PNFVTL
Trigger: AAGTGTGACAAAATTAGGCAAGAACGAGATGAAGCC...CTGACTGGCAGGCATCAACAGGGCTATTAGCACCCAGCATAGTTTGCCCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TTGAGCTTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGAGGGATCGGATAGGATaGGGAGGTGGAGGGGGAAGT +
Preference number: 5 (lower is better)
Translates to: LSFTSAFMASNNCVCQHMRDRIG*GGGGGS
Trigger: ACTTCCCCCTCCACCTCCCAATCCTATCCGATCCCT...CATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAAGCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CAA 90 bp TCCTATTTGGGATCCCTTGCTTTGGTTGACAGTGTCACCCCAGCCAGGGGCAAATTCATCCTCCTTGTGTaGAGTTGGATCTTTTTCAGC +
Preference number: 5 (lower is better)
Translates to: SYLGSLALVDSVTPARGKFILLV*SWIFFS
Trigger: GCTGAAAAAGATCCAACTCAACACAAGGAGGATGAA...TTTGCCCCTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp CTGTGGGTGAGGACTTTGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCTATGGGACTACGAGTTaGATGCCAGCTCCTGAGTTT +
Preference number: 5 (lower is better)
Translates to: LWVRTLFETSSHTKGCKCYGTTS*MPAPEF
Trigger: AAACTCAGGAGCTGGCATCAAACTCGTAGTCCCATA...GCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACAAAGTCCTCACCCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TATCTTCACCATACTGTACATAAGAACTCTGATAAAATATGGTACTTGTGCCACAGGCTGCGGAGGCACTaGAGGCTGCTGCGGCTAGGG +
Preference number: 5 (lower is better)
Translates to: YLHHTVHKNSDKIWYLCHRLRRH*RLLRLG
Trigger: CCCTAGCCGCAGCAGCCTCAAGTGCCTCCGCAGCCT...GTGGCACAAGTACCATATTTTATCAGAGTTCTTATGTACAGTATGGTGAAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS GCA 90 bp GCATGGATTTGGACTCTGAGGTGGCTAATATCCCAGTTGGACTACTaGTATCTGCTTCTGCTGTCACCTTTCTGCGACGCAAAATCCTTT +
Preference number: 5 (lower is better)
Translates to: AWIWTLRWLISQLDY*YLLLLSPFCDAKSF
Trigger: AAAGGATTTTGCGTCGCAGAAAGGTGACAGCAGAAGCAGATAGCAGTAGTCCAACTGGGATATTAGCCACCTCAGAGTCCAAATCCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000392901.10
ENST00000392903.3
ENST00000497044.5
CDS-3UTR CAA 90 bp ACTCAGGGCAAACTATGCTGGGTGCTAATAGCCCTGTTGATGCCTGCCAGTCAGATTACTTCTACGAGTTaGCTCTTGAGATTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: TQGKLCWVLIALLMPASQITSTS*LLRFSS
Trigger: GCTGGAAAATCTCAAGAGCAAACTCGTAGAAGTAAT...CTGACTGGCAGGCATCAACAGGGCTATTAGCACCCAGCATAGTTTGCCCTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp AGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTCTTTGTCTCTTTAGCTaGTTTTGCTCAATGAACATC +
Preference number: 5 (lower is better)
Translates to: SHTISISRPGGLKYGAVSLCLFS*FCSMNI
Trigger: GATGTTCATTGAGCAAAACAAGCTAAAGAGACAAAG...AGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp CTGTGGGTGAGGACTTTGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCTGGCTAATATCCCAGTaGGACTACTGCTATCTGCTT +
Preference number: 5 (lower is better)
Translates to: LWVRTLFETSSHTKGCKCWLISQ*DYCYLL
Trigger: AAGCAGATAGCAGTAGTCCAACTGGGATATTAGCCA...GCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACAAAGTCCTCACCCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000355371.9
CDS-3UTR CAA 90 bp TCCTATTTGGGATCCCTTGCTTTGGTTGACAGTGTCACCCCAGCCAGGGGCAAATGTTCAAGGCTGTTTTaGTTACACTGGATACAGAAC +
Preference number: 5 (lower is better)
Translates to: SYLGSLALVDSVTPARGKCSRLF*LHWIQN
Trigger: GTTCTGTATCCAGTGTAACAAAAACAGCCTTGAACA...TTTGCCCCTGGCTGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAAATAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000355371.9
CDS-3UTR CAA 90 bp ACTCAGGGCAAACTATGCTGGGTGCTAATAGCCCTGTTGATGCCTGCCAGTCAGCTTTCAGCATTCCATTaGATGAGTGGTATGCACATT +
Preference number: 5 (lower is better)
Translates to: TQGKLCWVLIALLMPASQLSAFH*MSGMHI
Trigger: AATGTGCATACCACTCATCAAATGGAATGCTGAAAG...CTGACTGGCAGGCATCAACAGGGCTATTAGCACCCAGCATAGTTTGCCCTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp ACTCAGGGCAAACTATGCTGGGTGCTAATAGCCCTGTTGATGCCTGCCAGTCAGACTGTAGAAAATAACTaGTATGCCACAGTACCCAAC +
Preference number: 5 (lower is better)
Translates to: TQGKLCWVLIALLMPASQTVENN*YATVPN
Trigger: GTTGGGTACTGTGGCATACAAGTTATTTTCTACAGT...CTGACTGGCAGGCATCAACAGGGCTATTAGCACCCAGCATAGTTTGCCCTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TATCTTCACCATACTGTACATAAGAACTCTGATAAAATATGGTACTTGTGCCACTCCACTACCCGGAAGTaGGATCCGCTCCCGCTCCTC +
Preference number: 5 (lower is better)
Translates to: YLHHTVHKNSDKIWYLCHSTTRK*DPLPLL
Trigger: GAGGAGCGGGAGCGGATCCAACTTCCGGGTAGTGGA...GTGGCACAAGTACCATATTTTATCAGAGTTCTTATGTACAGTATGGTGAAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000615301.4
CDS-3UTR CAA 90 bp TGTTGTTCCACAACGAGTGTAACTGAACAGGTAGAGTATGCATTTAGAAAAATACAAGATGCCGGTGGCTaGCGGCTCCACTACCCGGAA +
Preference number: 5 (lower is better)
Translates to: CCSTTSVTEQVEYAFRKIQDAGG*RLHYPE
Trigger: TTCCGGGTAGTGGAGCCGCAAGCCACCGGCATCTTG...TATTTTTCTAAATGCATACTCTACCTGTTCAGTTACACTCGTTGTGGAACAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000615301.4
CDS-3UTR CAA 90 bp GTTTTCAGTTTATCTCAGTCTACTGTAGAAAATAACTTGTATGCCACAGTACCCTCCGAGCTGTTCATTTaGGCGGGTGGGGCCGGGAAT +
Preference number: 5 (lower is better)
Translates to: VFSLSQSTVENNLYATVPSELFI*AGGAGN
Trigger: ATTCCCGGCCCCACCCGCCAAAATGAACAGCTCGGA...GGGTACTGTGGCATACAAGTTATTTTCTACAGTAGACTGAGATAAACTGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTACATCTGGTCCCAGCTaGGCCATGTACAACATGCTG +
Preference number: 5 (lower is better)
Translates to: FTSAFMASNNCVCQHMDPTSGPS*AMYNML
Trigger: CAGCATGTTGTACATGGCCAAGCTGGGACCAGATGT...AGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CAA 90 bp ACAGCAGTGAAGCAAGAAAAATGTGTGCTTGTCACTTATCTTCACCATACTGTAAGGGATCGGATAGGATaGGGAGGTGGAGGGGGAAGT +
Preference number: 5 (lower is better)
Translates to: TAVKQEKCVLVTYLHHTVRDRIG*GGGGGS
Trigger: ACTTCCCCCTCCACCTCCCAATCCTATCCGATCCCT...TACAGTATGGTGAAGATAAGTGACAAGCACACATTTTTCTTGCTTCACTGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TTCTTTAATAGCAATGGCACAAAGTACCTCTATCTCTGTTCCTCACTCGGGCTAGGTCCTCGGGAGGCTTaGGACACAATCAATAGCATG +
Preference number: 5 (lower is better)
Translates to: FFNSNGTKYLYLCSSLGLGPREA*DTINSM
Trigger: CATGCTATTGATTGTGTCCAAAGCCTCCCGAGGACC...TAGCCCGAGTGAGGAACAGAGATAGAGGTACTTTGTGCCATTGCTATTAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp ATTGAAAAGGACTTCCAAACATGTCAGGCTTCTGGTTTATGGATCAGCAGTTGGGGTCCTCGGGAGGCTTaGGACACAATCAATAGCATG +
Preference number: 5 (lower is better)
Translates to: IEKDFQTCQASGLWISSWGPREA*DTINSM
Trigger: CATGCTATTGATTGTGTCCAAAGCCTCCCGAGGACC...CCAACTGCTGATCCATAAACCAGAAGCCTGACATGTTTGGAAGTCCTTTTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615301.4
CDS-3UTR CAA 90 bp CTGTGGGTGAGGACTTTGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCCTGCTTGATGAGTCTTaGAAGGTCAGTGATAATGAC +
Preference number: 5 (lower is better)
Translates to: LWVRTLFETSSHTKGCKCLLDES*KVSDND
Trigger: GTCATTATCACTGACCTTCAAAGACTCATCAAGCAG...GCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACAAAGTCCTCACCCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TACAATAACCAGGTCAGCAGTGTGACTTCAACACAGAGCAGTTTACTCACCTATGAACTGTGTCACAGTTaGTGGCTGCTACTGCCTCTC +
Preference number: 5 (lower is better)
Translates to: YNNQVSSVTSTQSSLLTYELCHS*WLLLPL
Trigger: GAGAGGCAGTAGCAGCCACAAACTGTGACACAGTTC...ATAGGTGAGTAAACTGCTCTGTGTTGAAGTCACACTGCTGACCTGGTTATTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCTTTACCAATCAGGAACTGTGTCACAGTTaGTGGCTGCTACTGCCTCTC +
Preference number: 5 (lower is better)
Translates to: YFCCQLHTQSNTPSFTNQELCHS*WLLLPL
Trigger: GAGAGGCAGTAGCAGCCACAAACTGTGACACAGTTC...CTGATTGGTAAAGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp AGCCAAAGCATCCATCCTCCGTACTCAGGGCAAACTATGCTGGGTGCTAATAGCGATGTGACATATCCATaGCCTGAATTGCTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: SQSIHPPYSGQTMLGANSDVTYP*PELLFC
Trigger: ACAAAAGAGCAATTCAGGCAATGGATATGTCACATC...GCTATTAGCACCCAGCATAGTTTGCCCTGAGTACGGAGGATGGATGCTTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp CTTCCAAACATGTCAGGCTTCTGGTTTATGGATCAGCAGTTGGAGCTGTCTGTCAGGCCAATATTTTTGTaGCCAACTCCACACTCAGTC +
Preference number: 5 (lower is better)
Translates to: LPNMSGFWFMDQQLELSVRPIFL*PTPHSV
Trigger: GACTGAGTGTGGAGTTGGCAACAAAAATATTGGCCT...GACAGACAGCTCCAACTGCTGATCCATAAACCAGAAGCCTGACATGTTTGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615301.4
CDS GCA 90 bp GACTCTGCTTTCTTTCGAAGGTCCTTCTCCAGCTCCAGGTTTACTTaGATCTCCTCATACTCTTCTACAGCTAACATGGACACTCTATTG +
Preference number: 5 (lower is better)
Translates to: DSAFFRRSFSSSRFT*ISSYSSTANMDTLL
Trigger: CAATAGAGTGTCCATGTTAGCTGTAGAAGAGTATGAGGAGATGCAAGTAAACCTGGAGCTGGAGAAGGACCTTCGAAAGAAAGCAGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000392901.10
ENST00000392903.3
ENST00000497044.5
ENST00000615301.4
CDS CCA 90 bp CTGTTTTTGTTACACTGGATACAGAACCCAACACTGGCATGGATTTaGACTCTGAGGTGGCTAATATCCCAGTTGGACTACTGCTATCTG +
Preference number: 5 (lower is better)
Translates to: LFLLHWIQNPTLAWI*TLRWLISQLDYCYL
Trigger: CAGATAGCAGTAGTCCAACTGGGATATTAGCCACCTCAGAGTCCAAATCCATGCCAGTGTTGGGTTCTGTATCCAGTGTAACAAAAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000392901.10
ENST00000392903.3
ENST00000497044.5
CDS-3UTR CAA 90 bp TATCTTCACCATACTGTACATAAGAACTCTGATAAAATATGGTACTTGTGCCACTCCGAGCTGTTCATTTaGGCGGGTGGGGCCGGGAAT +
Preference number: 5 (lower is better)
Translates to: YLHHTVHKNSDKIWYLCHSELFI*AGGAGN
Trigger: ATTCCCGGCCCCACCCGCCAAAATGAACAGCTCGGA...GTGGCACAAGTACCATATTTTATCAGAGTTCTTATGTACAGTATGGTGAAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp ATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCACATCTGGTCCCAGCTaGGCCATGTACAACATGCTG +
Preference number: 5 (lower is better)
Translates to: MASNNCVCQHMDPFHCQFTSGPS*AMYNML
Trigger: CAGCATGTTGTACATGGCCAAGCTGGGACCAGATGT...GAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CAA 90 bp AATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTTTGTTTGTACATCTGGTCCCAGCTaGGCCATGTACAACATGCTG +
Preference number: 5 (lower is better)
Translates to: NSVNFVLQPPHFHVDFVCTSGPS*AMYNML
Trigger: CAGCATGTTGTACATGGCCAAGCTGGGACCAGATGT...ACAAACAAAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTCGAAGATTCTGGCTTaGTCTTCGGTCTGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: FTSAFMASNNCVCQHMDPSKILA*SSVWLS
Trigger: AGACAGCCAGACCGAAGACAAAGCCAGAATCTTCGA...AGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CAA 90 bp ATACCTGTTACTAATTGTTCCCTAGTCCAGCTAACACATTTCACCCAAAGGGCACTGTGGGTGAGGACTTaGTTTGAGACCAGCTCACAT +
Preference number: 5 (lower is better)
Translates to: IPVTNCSLVQLTHFTQRALWVRT*FETSSH
Trigger: ATGTGAGCTGGTCTCAAACAAAGTCCTCACCCACAG...TGCCCTTTGGGTGAAATGTGTTAGCTGGACTAGGGAACAATTAGTAACAGGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp ATTGAAAAGGACTTCCAAACATGTCAGGCTTCTGGTTTATGGATCAGCAGTTGGCTGTGGGTGAGGACTTaGTTTGAGACCAGCTCACAT +
Preference number: 5 (lower is better)
Translates to: IEKDFQTCQASGLWISSWLWVRT*FETSSH
Trigger: ATGTGAGCTGGTCTCAAACAAAGTCCTCACCCACAG...CCAACTGCTGATCCATAAACCAGAAGCCTGACATGTTTGGAAGTCCTTTTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615301.4
CDS-3UTR CAA 90 bp GTACCTCTATCTCTGTTCCTCACTCGGGCTATAAAATGCATCAACATTCGTTTTGTGCTAATAGCCCTGTaGATGCCTGCCAGTCAGAAC +
Preference number: 5 (lower is better)
Translates to: VPLSLFLTRAIKCINIRFVLIAL*MPASQN
Trigger: GTTCTGACTGGCAGGCATCAACAGGGCTATTAGCAC...AAAACGAATGTTGATGCATTTTATAGCCCGAGTGAGGAACAGAGATAGAGGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp AGCATCCCCACGGAGGTCCTCGGGAGGCTTTGGACACAATCAATAGCATGTATTAAAAATAATCCAGACTaGAAGGCTGTGATACAGACT +
Preference number: 5 (lower is better)
Translates to: SIPTEVLGRLWTQSIACIKNNPD*KAVIQT
Trigger: AGTCTGTATCACAGCCTTCAAGTCTGGATTATTTTT...AATACATGCTATTGATTGTGTCCAAAGCCTCCCGAGGACCTCCGTGGGGATGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS TCA 90 bp TACAATTTGATCTCGAAGTTCTTTAATTTGCTTCTGACACTGTACTaGGACACAAGTCTCGGCGGCACCGTCTGTGTCTGTAGTCGAATC +
Preference number: 5 (lower is better)
Translates to: YNLISKFFNLLLTLY*DTSLGGTVCVCSRI
Trigger: GATTCGACTACAGACACAGACGGTGCCGCCGAGACTTGTGTCTCAGTACAGTGTCAGAAGCAAATTAAAGAACTTCGAGATCAAATTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000392901.10
ENST00000392903.3
ENST00000497044.5
ENST00000615301.4
CDS GCA 90 bp ATATCCCAGTTGGACTACTGCTATCTGCTTCTGCTGTCACCTTTCTaGGACGCAAAATCCTTTCTAACTCAGTTTCACTGTTTTCAGGGT +
Preference number: 5 (lower is better)
Translates to: ISQLDYCYLLLLSPF*DAKSFLTQFHCFQG
Trigger: ACCCTGAAAACAGTGAAACTGAGTTAGAAAGGATTTTGCGTCGCAGAAAGGTGACAGCAGAAGCAGATAGCAGTAGTCCAACTGGGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000392901.10
ENST00000392903.3
ENST00000497044.5
CDS-3UTR CAA 90 bp TTCTTTAATAGCAATGGCACAAAGTACCTCTATCTCTGTTCCTCACTCGGGCTACAGCTCCAGGTTTACTaGCATCTCCTCATACTCTTC +
Preference number: 5 (lower is better)
Translates to: FFNSNGTKYLYLCSSLGLQLQVY*HLLILF
Trigger: GAAGAGTATGAGGAGATGCAAGTAAACCTGGAGCTG...TAGCCCGAGTGAGGAACAGAGATAGAGGTACTTTGTGCCATTGCTATTAAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTCAGCTCCAGGTTTACTaGCATCTCCTCATACTCTTC +
Preference number: 5 (lower is better)
Translates to: FTSAFMASNNCVCQHMDPQLQVY*HLLILF
Trigger: GAAGAGTATGAGGAGATGCAAGTAAACCTGGAGCTG...AGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CAA 90 bp TTCTTTAATAGCAATGGCACAAAGTACCTCTATCTCTGTTCCTCACTCGGGCTAAACACTGGCATGGATTaGGACTCTGAGGTGGCTAAT +
Preference number: 5 (lower is better)
Translates to: FFNSNGTKYLYLCSSLGLNTGMD*DSEVAN
Trigger: ATTAGCCACCTCAGAGTCCAAATCCATGCCAGTGTT...TAGCCCGAGTGAGGAACAGAGATAGAGGTACTTTGTGCCATTGCTATTAAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000355371.9
CDS-3UTR CAA 90 bp TTGAGCTTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGAACACTGGCATGGATTaGGACTCTGAGGTGGCTAAT +
Preference number: 5 (lower is better)
Translates to: LSFTSAFMASNNCVCQHMNTGMD*DSEVAN
Trigger: ATTAGCCACCTCAGAGTCCAAATCCATGCCAGTGTT...CATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAAGCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CAA 90 bp TTCTTTAATAGCAATGGCACAAAGTACCTCTATCTCTGTTCCTCACTCGGGCTATCAGCAACCTGGTCTTaGGTTTGGGGTTCATGTGTA +
Preference number: 5 (lower is better)
Translates to: FFNSNGTKYLYLCSSLGLSATWS*VWGSCV
Trigger: TACACATGAACCCCAAACCAAAGACCAGGTTGCTGA...TAGCCCGAGTGAGGAACAGAGATAGAGGTACTTTGTGCCATTGCTATTAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp ATACCTGTTACTAATTGTTCCCTAGTCCAGCTAACACATTTCACCCAAAGGGCATTTATGGATCAGCAGTaGGAGCTGTCTGTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: IPVTNCSLVQLTHFTQRAFMDQQ*ELSVSL
Trigger: GAGAGAGACAGACAGCTCCAACTGCTGATCCATAAA...TGCCCTTTGGGTGAAATGTGTTAGCTGGACTAGGGAACAATTAGTAACAGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCTTTACCAATCAGTTTATGGATCAGCAGTaGGAGCTGTCTGTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: YFCCQLHTQSNTPSFTNQFMDQQ*ELSVSL
Trigger: GAGAGAGACAGACAGCTCCAACTGCTGATCCATAAA...CTGATTGGTAAAGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp CTTCCAAACATGTCAGGCTTCTGGTTTATGGATCAGCAGTTGGAGCTGTCTGTCCTTTCAGCATTCCATTaGATGAGTGGTATGCACATT +
Preference number: 5 (lower is better)
Translates to: LPNMSGFWFMDQQLELSVLSAFH*MSGMHI
Trigger: AATGTGCATACCACTCATCAAATGGAATGCTGAAAG...GACAGACAGCTCCAACTGCTGATCCATAAACCAGAAGCCTGACATGTTTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615301.4
CDS-3UTR CAA 90 bp ACAGCAGTGAAGCAAGAAAAATGTGTGCTTGTCACTTATCTTCACCATACTGTATTGGGATCCCTTGCTTaGGTTGACAGTGTCACCCCA +
Preference number: 5 (lower is better)
Translates to: TAVKQEKCVLVTYLHHTVLGSLA*VDSVTP
Trigger: TGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAA...TACAGTATGGTGAAGATAAGTGACAAGCACACATTTTTCTTGCTTCACTGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp CTGTGGGTGAGGACTTTGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCAAAAATAATCCAGACTaGAAGGCTGTGATACAGACT +
Preference number: 5 (lower is better)
Translates to: LWVRTLFETSSHTKGCKCKNNPD*KAVIQT
Trigger: AGTCTGTATCACAGCCTTCAAGTCTGGATTATTTTT...GCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACAAAGTCCTCACCCACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp ATACCTGTTACTAATTGTTCCCTAGTCCAGCTAACACATTTCACCCAAAGGGCACTTCATATTCGCCTATaGCTTGCTCCTTCAGACTGG +
Preference number: 5 (lower is better)
Translates to: IPVTNCSLVQLTHFTQRALHIRL*LAPSDW
Trigger: CCAGTCTGAAGGAGCAAGCAATAGGCGAATATGAAG...TGCCCTTTGGGTGAAATGTGTTAGCTGGACTAGGGAACAATTAGTAACAGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp ATACCTGTTACTAATTGTTCCCTAGTCCAGCTAACACATTTCACCCAAAGGGCATCTGTGAACTTCGTTTaGCAGCCACCACACTTCCAT +
Preference number: 5 (lower is better)
Translates to: IPVTNCSLVQLTHFTQRASVNFV*QPPHFH
Trigger: ATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGA...TGCCCTTTGGGTGAAATGTGTTAGCTGGACTAGGGAACAATTAGTAACAGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATCGAAGATTCTGGCTTaGTCTTCGGTCTGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: FMASNNCVCQHMDPFHCQSKILA*SSVWLS
Trigger: AGACAGCCAGACCGAAGACAAAGCCAGAATCTTCGA...TTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CAA 90 bp TTGAGCTTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGTGGCTAATATCCCAGTaGGACTACTGCTATCTGCTT +
Preference number: 5 (lower is better)
Translates to: LSFTSAFMASNNCVCQHMWLISQ*DYCYLL
Trigger: AAGCAGATAGCAGTAGTCCAACTGGGATATTAGCCA...CATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAAGCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CAA 90 bp ATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCAACACTGGCATGGATTaGGACTCTGAGGTGGCTAAT +
Preference number: 5 (lower is better)
Translates to: MASNNCVCQHMDPFHCQFNTGMD*DSEVAN
Trigger: ATTAGCCACCTCAGAGTCCAAATCCATGCCAGTGTT...GAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CAA 90 bp TATTACAATAACCAGGTCAGCAGTGTGACTTCAACACAGAGCAGTTTACTCACCCCTCCTTGTGTTGAGTaGGATCTTTTTCAGCAACCT +
Preference number: 5 (lower is better)
Translates to: YYNNQVSSVTSTQSSLLTPPCVE*DLFQQP
Trigger: AGGTTGCTGAAAAAGATCCAACTCAACACAAGGAGG...GGTGAGTAAACTGCTCTGTGTTGAAGTCACACTGCTGACCTGGTTATTGTAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp AGCAGGACGTATGTAAGTTTTGTGTGTGCAATAGCTATGAACATACCTTGCAGACTAAATGTGTGTGAGTaGCATGCTGGCAGACAGATC +
Preference number: 5 (lower is better)
Translates to: SRTYVSFVCAIAMNIPCRLNVCE*HAGRQI
Trigger: GATCTGTCTGCCAGCATGCAACTCACACACATTTAG...TCTGCAAGGTATGTTCATAGCTATTGCACACACAAAACTTACATACGTCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp AGCAGGACGTATGTAAGTTTTGTGTGTGCAATAGCTATGAACATACCTTGCAGACCTATTTGGGATCCCTaGCTTTGGTTGACAGTGTCA +
Preference number: 5 (lower is better)
Translates to: SRTYVSFVCAIAMNIPCRPIWDP*LWLTVS
Trigger: TGACACTGTCAACCAAAGCAAGGGATCCCAAATAGG...TCTGCAAGGTATGTTCATAGCTATTGCACACACAAAACTTACATACGTCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TACAATAACCAGGTCAGCAGTGTGACTTCAACACAGAGCAGTTTACTCACCTATCCTATGTCTTCCTATTaGGGATCCCTTGCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: YNNQVSSVTSTQSSLLTYPMSSY*GSLALV
Trigger: AACCAAAGCAAGGGATCCCAAATAGGAAGACATAGG...ATAGGTGAGTAAACTGCTCTGTGTTGAAGTCACACTGCTGACCTGGTTATTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGGACTGTGCTAATAGCCCTGTaGATGCCTGCCAGTCAGAAC +
Preference number: 5 (lower is better)
Translates to: STALANITTLIMCLLKRTVLIAL*MPASQN
Trigger: GTTCTGACTGGCAGGCATCAACAGGGCTATTAGCAC...AGTCCTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCACTTCATATTCGCCTATaGCTTGCTCCTTCAGACTGG +
Preference number: 5 (lower is better)
Translates to: WHLTTVSVNTWILFTVNSLHIRL*LAPSDW
Trigger: CCAGTCTGAAGGAGCAAGCAATAGGCGAATATGAAG...TGAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392903.3
CDS-3UTR CAA 90 bp TTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTGTCACACTTCTCCTTaGTTTTCTGGTTCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: FTSAFMASNNCVCQHMDPCHTSP*FSGSLL
Trigger: GAGCAGAGAACCAGAAAACAAAGGAGAAGTGTGACA...AGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CAA 90 bp AGCAGGACGTATGTAAGTTTTGTGTGTGCAATAGCTATGAACATACCTTGCAGATCTCAAAGCTATGATTaGAAACTGGCTCAGGCGCAG +
Preference number: 5 (lower is better)
Translates to: SRTYVSFVCAIAMNIPCRSQSYD*KLAQAQ
Trigger: CTGCGCCTGAGCCAGTTTCAAATCATAGCTTTGAGA...TCTGCAAGGTATGTTCATAGCTATTGCACACACAAAACTTACATACGTCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TTGAGCTTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGGGCTTCATCTCGTTCTaGCCTAATTTTGTCACACTT +
Preference number: 5 (lower is better)
Translates to: LSFTSAFMASNNCVCQHMGFISF*PNFVTL
Trigger: AAGTGTGACAAAATTAGGCAAGAACGAGATGAAGCC...CATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAAGCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CAA 90 bp TATTACAATAACCAGGTCAGCAGTGTGACTTCAACACAGAGCAGTTTACTCACCGGCTTCATCTCGTTCTaGCCTAATTTTGTCACACTT +
Preference number: 5 (lower is better)
Translates to: YYNNQVSSVTSTQSSLLTGFISF*PNFVTL
Trigger: AAGTGTGACAAAATTAGGCAAGAACGAGATGAAGCC...GGTGAGTAAACTGCTCTGTGTTGAAGTCACACTGCTGACCTGGTTATTGTAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCTTTAATTAAAATCTTAACATCTGGTCCCAGCTaGGCCATGTACAACATGCTG +
Preference number: 5 (lower is better)
Translates to: CLRPAHIQKGASALIKILTSGPS*AMYNML
Trigger: CAGCATGTTGTACATGGCCAAGCTGGGACCAGATGT...TAAGATTTTAATTAAAGCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TTGAGCTTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGTCTACGAGTTTGCTCTaGAGATTTTCCAGCTCAATG +
Preference number: 5 (lower is better)
Translates to: LSFTSAFMASNNCVCQHMSTSLL*RFSSSM
Trigger: CATTGAGCTGGAAAATCTCAAGAGCAAACTCGTAGA...CATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAAGCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CAA 90 bp TTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAACAGCTCCAGGTTTACTaGCATCTCCTCATACTCTTC +
Preference number: 5 (lower is better)
Translates to: FMASNNCVCQHMDPFHCQQLQVY*HLLILF
Trigger: GAAGAGTATGAGGAGATGCAAGTAAACCTGGAGCTG...TTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CAA 90 bp TGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCATGGCTAATATCCCAGTaGGACTACTGCTATCTGCTT +
Preference number: 5 (lower is better)
Translates to: WHLTTVSVNTWILFTVNSWLISQ*DYCYLL
Trigger: AAGCAGATAGCAGTAGTCCAACTGGGATATTAGCCA...TGAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CAA 90 bp TATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCTTTACCAATCAGTACAACTGGTTCGGCTaGTTTTTCACCGTCAATGTA +
Preference number: 5 (lower is better)
Translates to: YFCCQLHTQSNTPSFTNQYNWFG*FFTVNV
Trigger: TACATTGACGGTGAAAAACAAGCCGAACCAGTTGTA...CTGATTGGTAAAGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TACAATAACCAGGTCAGCAGTGTGACTTCAACACAGAGCAGTTTACTCACCTATTACAACTGGTTCGGCTaGTTTTTCACCGTCAATGTA +
Preference number: 5 (lower is better)
Translates to: YNNQVSSVTSTQSSLLTYYNWFG*FFTVNV
Trigger: TACATTGACGGTGAAAAACAAGCCGAACCAGTTGTA...ATAGGTGAGTAAACTGCTCTGTGTTGAAGTCACACTGCTGACCTGGTTATTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp GTACCTCTATCTCTGTTCCTCACTCGGGCTATAAAATGCATCAACATTCGTTTTAACCTGGTCTTTGGTTaGGGGTTCATGTGTAGAAAC +
Preference number: 5 (lower is better)
Translates to: VPLSLFLTRAIKCINIRFNLVFG*GFMCRN
Trigger: GTTTCTACACATGAACCCCAAACCAAAGACCAGGTT...AAAACGAATGTTGATGCATTTTATAGCCCGAGTGAGGAACAGAGATAGAGGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp AGCAGGACGTATGTAAGTTTTGTGTGTGCAATAGCTATGAACATACCTTGCAGACCTCCTTGTGTTGAGTaGGATCTTTTTCAGCAACCT +
Preference number: 5 (lower is better)
Translates to: SRTYVSFVCAIAMNIPCRPPCVE*DLFQQP
Trigger: AGGTTGCTGAAAAAGATCCAACTCAACACAAGGAGG...TCTGCAAGGTATGTTCATAGCTATTGCACACACAAAACTTACATACGTCCTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TTACCAACTTACTACTGTAAAATTCAAGGTTTGGACTTTCACCTCAGTTCTGTATTGGGATCCCTTGCTTaGGTTGACAGTGTCACCCCA +
Preference number: 5 (lower is better)
Translates to: LPTYYCKIQGLDFHLSSVLGSLA*VDSVTP
Trigger: TGGGGTGACACTGTCAACCAAAGCAAGGGATCCCAA...TACAGAACTGAGGTGAAAGTCCAAACCTTGAATTTTACAGTAGTAAGTTGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp CCAATATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCTTTACCAACTGCTTGATGAGTCTTaGAAGGTCAGTGATAATGAC +
Preference number: 5 (lower is better)
Translates to: PIFLLPTPHSVKHPILYQLLDES*KVSDND
Trigger: GTCATTATCACTGACCTTCAAAGACTCATCAAGCAG...TTGGTAAAGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATATTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp CCAATATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCTTTACCAATATCCATTGCCTGAATaGCTCTTTTGTAAGCCAGTG +
Preference number: 5 (lower is better)
Translates to: PIFLLPTPHSVKHPILYQYPLPE*LFCKPV
Trigger: CACTGGCTTACAAAAGAGCAATTCAGGCAATGGATA...TTGGTAAAGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATATTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp GTACCTCTATCTCTGTTCCTCACTCGGGCTATAAAATGCATCAACATTCGTTTTAGGCCAATATTTTTGTaGCCAACTCCACACTCAGTC +
Preference number: 5 (lower is better)
Translates to: VPLSLFLTRAIKCINIRFRPIFL*PTPHSV
Trigger: GACTGAGTGTGGAGTTGGCAACAAAAATATTGGCCT...AAAACGAATGTTGATGCATTTTATAGCCCGAGTGAGGAACAGAGATAGAGGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TATTACAATAACCAGGTCAGCAGTGTGACTTCAACACAGAGCAGTTTACTCACCCCATGTGGATTTTGTTaGTCTATTAGCTCTCCTGTC +
Preference number: 5 (lower is better)
Translates to: YYNNQVSSVTSTQSSLLTPCGFC*SISSPV
Trigger: GACAGGAGAGCTAATAGACAAACAAAATCCACATGG...GGTGAGTAAACTGCTCTGTGTTGAAGTCACACTGCTGACCTGGTTATTGTAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TTGAGCTTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGAATTCAACACATATTTaGCAGACCTTGGGCCTGCAA +
Preference number: 5 (lower is better)
Translates to: LSFTSAFMASNNCVCQHMNSTHI*QTLGLQ
Trigger: TTGCAGGCCCAAGGTCTGCAAAATATGTGTTGAATT...CATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAAGCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CAA 90 bp TTCTTTAATAGCAATGGCACAAAGTACCTCTATCTCTGTTCCTCACTCGGGCTACTAATTTTGTCACACTaGCTCCTTCAGACTGGTAAT +
Preference number: 5 (lower is better)
Translates to: FFNSNGTKYLYLCSSLGLLILSH*LLQTGN
Trigger: ATTACCAGTCTGAAGGAGCAAGTGTGACAAAATTAG...TAGCCCGAGTGAGGAACAGAGATAGAGGTACTTTGTGCCATTGCTATTAAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260777.14
CDS-3UTR CAA 90 bp AGCAGGACGTATGTAAGTTTTGTGTGTGCAATAGCTATGAACATACCTTGCAGAGGCTTCATCTCGTTCTaGCCTAATTTTGTCACACTT +
Preference number: 5 (lower is better)
Translates to: SRTYVSFVCAIAMNIPCRGFISF*PNFVTL
Trigger: AAGTGTGACAAAATTAGGCAAGAACGAGATGAAGCC...TCTGCAAGGTATGTTCATAGCTATTGCACACACAAAACTTACATACGTCCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp CAGCCACCACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGTCCATTCTTTATTTAGCTTTGTaGCCAAAGCTTCAGCACTTT +
Preference number: 5 (lower is better)
Translates to: QPPHFHVDFVCLLALLSILYLAL*PKLQHF
Trigger: AAAGTGCTGAAGCTTTGGCAACAAAGCTAAATAAAG...AATGGACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGGTGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp ATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCTCTACGAGTTTGCTCTaGAGATTTTCCAGCTCAATG +
Preference number: 5 (lower is better)
Translates to: MASNNCVCQHMDPFHCQFSTSLL*RFSSSM
Trigger: CATTGAGCTGGAAAATCTCAAGAGCAAACTCGTAGA...GAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CAA 90 bp TTCTTTAATAGCAATGGCACAAAGTACCTCTATCTCTGTTCCTCACTCGGGCTAATTACTTCTACGAGTTaGCTCTTGAGATTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: FFNSNGTKYLYLCSSLGLITSTS*LLRFSS
Trigger: GCTGGAAAATCTCAAGAGCAAACTCGTAGAAGTAAT...TAGCCCGAGTGAGGAACAGAGATAGAGGTACTTTGTGCCATTGCTATTAAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp AATGTCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGTCGAAGATTCTGGCTTaGTCTTCGGTCTGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: NVYSPCQYNNTNHVLIEKSKILA*SSVWLS
Trigger: AGACAGCCAGACCGAAGACAAAGCCAGAATCTTCGA...CTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTGTTCAAGGCTGTTTTaGTTACACTGGATACAGAAC +
Preference number: 5 (lower is better)
Translates to: FTSAFMASNNCVCQHMDPCSRLF*LHWIQN
Trigger: GTTCTGTATCCAGTGTAACAAAAACAGCCTTGAACA...AGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CAA 90 bp AGCAGGACGTATGTAAGTTTTGTGTGTGCAATAGCTATGAACATACCTTGCAGATTCATCCTCCTTGTGTaGAGTTGGATCTTTTTCAGC +
Preference number: 5 (lower is better)
Translates to: SRTYVSFVCAIAMNIPCRFILLV*SWIFFS
Trigger: GCTGAAAAAGATCCAACTCAACACAAGGAGGATGAA...TCTGCAAGGTATGTTCATAGCTATTGCACACACAAAACTTACATACGTCCTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp CAGTCTACTGTAGAAAATAACTTGTATGCCACAGTACCCAACAATTTCCATGCTCCTATGTCTTCCTATTaGGGATCCCTTGCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: QSTVENNLYATVPNNFHAPMSSY*GSLALV
Trigger: AACCAAAGCAAGGGATCCCAAATAGGAAGACATAGG...AGCATGGAAATTGTTGGGTACTGTGGCATACAAGTTATTTTCTACAGTAGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp AGCAGGACGTATGTAAGTTTTGTGTGTGCAATAGCTATGAACATACCTTGCAGAATATTCGCCTATTGCTaGCTCCTTCAGACTGGTAAT +
Preference number: 5 (lower is better)
Translates to: SRTYVSFVCAIAMNIPCRIFAYC*LLQTGN
Trigger: ATTACCAGTCTGAAGGAGCAAGCAATAGGCGAATAT...TCTGCAAGGTATGTTCATAGCTATTGCACACACAAAACTTACATACGTCCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCAATATTCGCCTATTGCTaGCTCCTTCAGACTGGTAAT +
Preference number: 5 (lower is better)
Translates to: WHLTTVSVNTWILFTVNSIFAYC*LLQTGN
Trigger: ATTACCAGTCTGAAGGAGCAAGCAATAGGCGAATAT...TGAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392903.3
CDS-3UTR CAA 90 bp TTGAGCTTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGCGTTCTTGCCTAATTTaGTCACACTTCTCCTTTGTT +
Preference number: 5 (lower is better)
Translates to: LSFTSAFMASNNCVCQHMRSCLI*SHFSFV
Trigger: AACAAAGGAGAAGTGTGACAAAATTAGGCAAGAACG...CATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAAGCTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CAA 90 bp TTCTTTAATAGCAATGGCACAAAGTACCTCTATCTCTGTTCCTCACTCGGGCTAGTGTTCACATACCCTTaGAAAAATACACACACACAC +
Preference number: 5 (lower is better)
Translates to: FFNSNGTKYLYLCSSLGLVFTYP*KNTHTH
Trigger: GTGTGTGTGTGTATTTTTCAAAGGGTATGTGAACAC...TAGCCCGAGTGAGGAACAGAGATAGAGGTACTTTGTGCCATTGCTATTAAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp CCAATATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCTTTACCAAGTGTTCACATACCCTTaGAAAAATACACACACACAC +
Preference number: 5 (lower is better)
Translates to: PIFLLPTPHSVKHPILYQVFTYP*KNTHTH
Trigger: GTGTGTGTGTGTATTTTTCAAAGGGTATGTGAACAC...TTGGTAAAGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp GTACCTCTATCTCTGTTCCTCACTCGGGCTATAAAATGCATCAACATTCGTTTTTGGTATCACTCTAAGTaGGAAGAACTGTGTCACAGT +
Preference number: 5 (lower is better)
Translates to: VPLSLFLTRAIKCINIRFWYHSK*EELCHS
Trigger: ACTGTGACACAGTTCTTCCAACTTAGAGTGATACCA...AAAACGAATGTTGATGCATTTTATAGCCCGAGTGAGGAACAGAGATAGAGGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp AGCAGGACGTATGTAAGTTTTGTGTGTGCAATAGCTATGAACATACCTTGCAGATGGTATCACTCTAAGTaGGAAGAACTGTGTCACAGT +
Preference number: 5 (lower is better)
Translates to: SRTYVSFVCAIAMNIPCRWYHSK*EELCHS
Trigger: ACTGTGACACAGTTCTTCCAACTTAGAGTGATACCA...TCTGCAAGGTATGTTCATAGCTATTGCACACACAAAACTTACATACGTCCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp ATACCTGTTACTAATTGTTCCCTAGTCCAGCTAACACATTTCACCCAAAGGGCAGATGTGACATATCCATaGCCTGAATTGCTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: IPVTNCSLVQLTHFTQRADVTYP*PELLFC
Trigger: ACAAAAGAGCAATTCAGGCAATGGATATGTCACATC...TGCCCTTTGGGTGAAATGTGTTAGCTGGACTAGGGAACAATTAGTAACAGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp AGCAGGACGTATGTAAGTTTTGTGTGTGCAATAGCTATGAACATACCTTGCAGACCATGTGGATTTTGTTaGTCTATTAGCTCTCCTGTC +
Preference number: 5 (lower is better)
Translates to: SRTYVSFVCAIAMNIPCRPCGFC*SISSPV
Trigger: GACAGGAGAGCTAATAGACAAACAAAATCCACATGG...TCTGCAAGGTATGTTCATAGCTATTGCACACACAAAACTTACATACGTCCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp ATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCAATTCAACACATATTTaGCAGACCTTGGGCCTGCAA +
Preference number: 5 (lower is better)
Translates to: MASNNCVCQHMDPFHCQFNSTHI*QTLGLQ
Trigger: TTGCAGGCCCAAGGTCTGCAAAATATGTGTTGAATT...GAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CAA 90 bp TTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAAGGCTTCATCTCGTTCTaGCCTAATTTTGTCACACTT +
Preference number: 5 (lower is better)
Translates to: FMASNNCVCQHMDPFHCQGFISF*PNFVTL
Trigger: AAGTGTGACAAAATTAGGCAAGAACGAGATGAAGCC...TTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CAA 90 bp TATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCTTTACCAATCAGTTTCTTTATTTAGCTTaGTTGCCAAAGCTTCAGCAC +
Preference number: 5 (lower is better)
Translates to: YFCCQLHTQSNTPSFTNQFLYLA*LPKLQH
Trigger: GTGCTGAAGCTTTGGCAACAAAGCTAAATAAAGAAA...CTGATTGGTAAAGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TTGAGCTTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGTTTCTTTATTTAGCTTaGTTGCCAAAGCTTCAGCAC +
Preference number: 5 (lower is better)
Translates to: LSFTSAFMASNNCVCQHMFLYLA*LPKLQH
Trigger: GTGCTGAAGCTTTGGCAACAAAGCTAAATAAAGAAA...CATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAAGCTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CAA 90 bp CAGTCTACTGTAGAAAATAACTTGTATGCCACAGTACCCAACAATTTCCATGCTTCTACGAGTTTGCTCTaGAGATTTTCCAGCTCAATG +
Preference number: 5 (lower is better)
Translates to: QSTVENNLYATVPNNFHASTSLL*RFSSSM
Trigger: CATTGAGCTGGAAAATCTCAAGAGCAAACTCGTAGA...AGCATGGAAATTGTTGGGTACTGTGGCATACAAGTTATTTTCTACAGTAGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp ATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCATTACTTCTACGAGTTaGCTCTTGAGATTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: MASNNCVCQHMDPFHCQFITSTS*LLRFSS
Trigger: GCTGGAAAATCTCAAGAGCAAACTCGTAGAAGTAAT...GAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CAA 90 bp TGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCTTTAATTAAAATCTTACAGCTCCAGGTTTACTaGCATCTCCTCATACTCTTC +
Preference number: 5 (lower is better)
Translates to: CLRPAHIQKGASALIKILQLQVY*HLLILF
Trigger: GAAGAGTATGAGGAGATGCAAGTAAACCTGGAGCTG...TAAGATTTTAATTAAAGCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTCTTTGTCTCTTTAGCTaGTTTTGCTCAATGAACATC +
Preference number: 5 (lower is better)
Translates to: FTSAFMASNNCVCQHMDPLCLFS*FCSMNI
Trigger: GATGTTCATTGAGCAAAACAAGCTAAAGAGACAAAG...AGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CAA 90 bp TTGAGCTTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGCTTTGTCTCTTTAGCTaGTTTTGCTCAATGAACATC +
Preference number: 5 (lower is better)
Translates to: LSFTSAFMASNNCVCQHMLCLFS*FCSMNI
Trigger: GATGTTCATTGAGCAAAACAAGCTAAAGAGACAAAG...CATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAAGCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CAA 90 bp ATACCTGTTACTAATTGTTCCCTAGTCCAGCTAACACATTTCACCCAAAGGGCATTCTTTGACCTTTTGTaGATGCTGAATTCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: IPVTNCSLVQLTHFTQRAFFDLL*MLNSLF
Trigger: GAAGAGAGAATTCAGCATCAACAAAAGGTCAAAGAA...TGCCCTTTGGGTGAAATGTGTTAGCTGGACTAGGGAACAATTAGTAACAGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TTCACATCTGCCTTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTCTTTGACCTTTTGTaGATGCTGAATTCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: FTSAFMASNNCVCQHMDPFFDLL*MLNSLF
Trigger: GAAGAGAGAATTCAGCATCAACAAAAGGTCAAAGAA...AGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAAGGCAGATGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CAA 90 bp TGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCAAGTTGCTGTTTGAGGTaGTGTATTTCTTTGTGGAGT +
Preference number: 5 (lower is better)
Translates to: WHLTTVSVNTWILFTVNSSCCLR*CISLWS
Trigger: ACTCCACAAAGAAATACACAACCTCAAACAGCAACT...TGAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CAA 90 bp GTACCTCTATCTCTGTTCCTCACTCGGGCTATAAAATGCATCAACATTCGTTTTTGTTCAAGGCTGTTTTaGTTACACTGGATACAGAAC +
Preference number: 5 (lower is better)
Translates to: VPLSLFLTRAIKCINIRFCSRLF*LHWIQN
Trigger: GTTCTGTATCCAGTGTAACAAAAACAGCCTTGAACA...AAAACGAATGTTGATGCATTTTATAGCCCGAGTGAGGAACAGAGATAGAGGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000355371.9
CDS-3UTR CAA 90 bp GTACCTCTATCTCTGTTCCTCACTCGGGCTATAAAATGCATCAACATTCGTTTTCTTTCAGCATTCCATTaGATGAGTGGTATGCACATT +
Preference number: 5 (lower is better)
Translates to: VPLSLFLTRAIKCINIRFLSAFH*MSGMHI
Trigger: AATGTGCATACCACTCATCAAATGGAATGCTGAAAG...AAAACGAATGTTGATGCATTTTATAGCCCGAGTGAGGAACAGAGATAGAGGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp AATGTCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGCTAAATGTGTGTGAGTaGCATGCTGGCAGACAGATC +
Preference number: 5 (lower is better)
Translates to: NVYSPCQYNNTNHVLIEKLNVCE*HAGRQI
Trigger: GATCTGTCTGCCAGCATGCAACTCACACACATTTAG...CTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCTTTAATTAAAATCTTACCTATTTGGGATCCCTaGCTTTGGTTGACAGTGTCA +
Preference number: 5 (lower is better)
Translates to: CLRPAHIQKGASALIKILPIWDP*LWLTVS
Trigger: TGACACTGTCAACCAAAGCAAGGGATCCCAAATAGG...TAAGATTTTAATTAAAGCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCACGTTCTTGCCTAATTTaGTCACACTTCTCCTTTGTT +
Preference number: 5 (lower is better)
Translates to: WHLTTVSVNTWILFTVNSRSCLI*SHFSFV
Trigger: AACAAAGGAGAAGTGTGACAAAATTAGGCAAGAACG...TGAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CAA 90 bp AATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTTTGTTTGTCGTTCTTGCCTAATTTaGTCACACTTCTCCTTTGTT +
Preference number: 5 (lower is better)
Translates to: NSVNFVLQPPHFHVDFVCRSCLI*SHFSFV
Trigger: AACAAAGGAGAAGTGTGACAAAATTAGGCAAGAACG...ACAAACAAAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp AATGTCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGGAGCATGCAGGAGACTaGGTTGGTATCACTCTAAGT +
Preference number: 5 (lower is better)
Translates to: NVYSPCQYNNTNHVLIEKEHAGD*VGITLS
Trigger: ACTTAGAGTGATACCAACCAAGTCTCCTGCATGCTC...CTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCTTTAATTAAAATCTTATCTCAAAGCTATGATTaGAAACTGGCTCAGGCGCAG +
Preference number: 5 (lower is better)
Translates to: CLRPAHIQKGASALIKILSQSYD*KLAQAQ
Trigger: CTGCGCCTGAGCCAGTTTCAAATCATAGCTTTGAGA...TAAGATTTTAATTAAAGCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp CAGTCTACTGTAGAAAATAACTTGTATGCCACAGTACCCAACAATTTCCATGCTAAGAGGCCAATATTTTaGTTGCCAACTCCACACTCA +
Preference number: 5 (lower is better)
Translates to: QSTVENNLYATVPNNFHAKRPIF*LPTPHS
Trigger: TGAGTGTGGAGTTGGCAACAAAAATATTGGCCTCTT...AGCATGGAAATTGTTGGGTACTGTGGCATACAAGTTATTTTCTACAGTAGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp AATGTCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGTCTGTGAACTTCGTTTaGCAGCCACCACACTTCCAT +
Preference number: 5 (lower is better)
Translates to: NVYSPCQYNNTNHVLIEKSVNFV*QPPHFH
Trigger: ATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGA...CTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS CCA 90 bp AGTCGAATCTTCATCATCAATGTTTATCTCTTCAGTTATTACATCTaGTCCCAGCTTGGCCATGTACAACATGCTGATTCTTTTCAACGT +
Preference number: 5 (lower is better)
Translates to: SRIFIINVYLFSYYI*SQLGHVQHADSFQR
Trigger: ACGTTGAAAAGAATCAGCATGTTGTACATGGCCAAGCTGGGACCAGATGTAATAACTGAAGAGATAAACATTGATGATGAAGATTCGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000392901.10
ENST00000392903.3
ENST00000490615.1
ENST00000497044.5
ENST00000615301.4
CDS-3UTR CAA 90 bp TGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCTTTAATTAAAATCTTACGTTCTTGCCTAATTTaGTCACACTTGCTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: CLRPAHIQKGASALIKILRSCLI*SHLLLQ
Trigger: CTGAAGGAGCAAGTGTGACAAAATTAGGCAAGAACG...TAAGATTTTAATTAAAGCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260777.14
CDS-3UTR CAA 90 bp GTACCTCTATCTCTGTTCCTCACTCGGGCTATAAAATGCATCAACATTCGTTTTCTTTATTTAGCTTTGTaGCCAAAGCTTCAGCACTTT +
Preference number: 5 (lower is better)
Translates to: VPLSLFLTRAIKCINIRFLYLAL*PKLQHF
Trigger: AAAGTGCTGAAGCTTTGGCAACAAAGCTAAATAAAG...AAAACGAATGTTGATGCATTTTATAGCCCGAGTGAGGAACAGAGATAGAGGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCACTTTATTTAGCTTTGTaGCCAAAGCTTCAGCACTTT +
Preference number: 5 (lower is better)
Translates to: WHLTTVSVNTWILFTVNSLYLAL*PKLQHF
Trigger: AAAGTGCTGAAGCTTTGGCAACAAAGCTAAATAAAG...TGAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CAA 90 bp ATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCCTTTATTTAGCTTTGTaGCCAAAGCTTCAGCACTTT +
Preference number: 5 (lower is better)
Translates to: MASNNCVCQHMDPFHCQFLYLAL*PKLQHF
Trigger: AAAGTGCTGAAGCTTTGGCAACAAAGCTAAATAAAG...GAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CAA 90 bp AGCAGGACGTATGTAAGTTTTGTGTGTGCAATAGCTATGAACATACCTTGCAGATTTCTTTATTTAGCTTaGTTGCCAAAGCTTCAGCAC +
Preference number: 5 (lower is better)
Translates to: SRTYVSFVCAIAMNIPCRFLYLA*LPKLQH
Trigger: GTGCTGAAGCTTTGGCAACAAAGCTAAATAAAGAAA...TCTGCAAGGTATGTTCATAGCTATTGCACACACAAAACTTACATACGTCCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp ATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCTTTCTTTATTTAGCTTaGTTGCCAAAGCTTCAGCAC +
Preference number: 5 (lower is better)
Translates to: MASNNCVCQHMDPFHCQFFLYLA*LPKLQH
Trigger: GTGCTGAAGCTTTGGCAACAAAGCTAAATAAAGAAA...GAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CAA 90 bp TTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAAATTACTTCTACGAGTTaGCTCTTGAGATTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: FMASNNCVCQHMDPFHCQITSTS*LLRFSS
Trigger: GCTGGAAAATCTCAAGAGCAAACTCGTAGAAGTAAT...TTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CAA 90 bp GTACCTCTATCTCTGTTCCTCACTCGGGCTATAAAATGCATCAACATTCGTTTTCTTTGTCTCTTTAGCTaGTTTTGCTCAATGAACATC +
Preference number: 5 (lower is better)
Translates to: VPLSLFLTRAIKCINIRFLCLFS*FCSMNI
Trigger: GATGTTCATTGAGCAAAACAAGCTAAAGAGACAAAG...AAAACGAATGTTGATGCATTTTATAGCCCGAGTGAGGAACAGAGATAGAGGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp ATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATTCTTCTTTGACCTTTTGTaGATGCTGAATTCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: MASNNCVCQHMDPFHCQFFFDLL*MLNSLF
Trigger: GAAGAGAGAATTCAGCATCAACAAAAGGTCAAAGAA...GAATTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CAA 90 bp AATGTCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGTGGCTAATATCCCAGTaGGACTACTGCTATCTGCTT +
Preference number: 5 (lower is better)
Translates to: NVYSPCQYNNTNHVLIEKWLISQ*DYCYLL
Trigger: AAGCAGATAGCAGTAGTCCAACTGGGATATTAGCCA...CTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000355371.9
CDS-3UTR CAA 90 bp TTTATGGCATCTAACAACTGTGTCTGTCAACACATGGATCCTTTTCACTGTCAATGTTCAAGGCTGTTTTaGTTACACTGGATACAGAAC +
Preference number: 5 (lower is better)
Translates to: FMASNNCVCQHMDPFHCQCSRLF*LHWIQN
Trigger: GTTCTGTATCCAGTGTAACAAAAACAGCCTTGAACA...TTGACAGTGAAAAGGATCCATGTGTTGACAGACACAGTTGTTAGATGCCATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392901.10
ENST00000392903.3
CDS-3UTR CAA 90 bp AATGTCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGAACCTGGTCTTTGGTTaGGGGTTCATGTGTAGAAAC +
Preference number: 5 (lower is better)
Translates to: NVYSPCQYNNTNHVLIEKNLVFG*GFMCRN
Trigger: GTTTCTACACATGAACCCCAAACCAAAGACCAGGTT...CTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TATCTTCACCATACTGTACATAAGAACTCTGATAAAATATGGTACTTGTGCCACAACCTGGTCTTTGGTTaGGGGTTCATGTGTAGAAAC +
Preference number: 5 (lower is better)
Translates to: YLHHTVHKNSDKIWYLCHNLVFG*GFMCRN
Trigger: GTTTCTACACATGAACCCCAAACCAAAGACCAGGTT...GTGGCACAAGTACCATATTTTATCAGAGTTCTTATGTACAGTATGGTGAAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCTTTAATTAAAATCTTACCTCCTTGTGTTGAGTaGGATCTTTTTCAGCAACCT +
Preference number: 5 (lower is better)
Translates to: CLRPAHIQKGASALIKILPPCVE*DLFQQP
Trigger: AGGTTGCTGAAAAAGATCCAACTCAACACAAGGAGG...TAAGATTTTAATTAAAGCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp AGCAGGACGTATGTAAGTTTTGTGTGTGCAATAGCTATGAACATACCTTGCAGACTAGGAATGTGTGTTTaGCTAAACAGCTTACTTATG +
Preference number: 5 (lower is better)
Translates to: SRTYVSFVCAIAMNIPCRLGMCV*LNSLLM
Trigger: CATAAGTAAGCTGTTTAGCAAAACACACATTCCTAG...TCTGCAAGGTATGTTCATAGCTATTGCACACACAAAACTTACATACGTCCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TTAATAGCAATGGCACAAAGTACCTCTATCTCTGTTCCTCACTCGGGCTATAAACTAGGAATGTGTGTTTaGCTAAACAGCTTACTTATG +
Preference number: 5 (lower is better)
Translates to: LIAMAQSTSISVPHSGYKLGMCV*LNSLLM
Trigger: CATAAGTAAGCTGTTTAGCAAAACACACATTCCTAG...TTTATAGCCCGAGTGAGGAACAGAGATAGAGGTACTTTGTGCCATTGCTATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp AATGTCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGCCTATGTCTTCCTATTaGGGATCCCTTGCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: NVYSPCQYNNTNHVLIEKPMSSY*GSLALV
Trigger: AACCAAAGCAAGGGATCCCAAATAGGAAGACATAGG...CTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TGTTGTTCCACAACGAGTGTAACTGAACAGGTAGAGTATGCATTTAGAAAAATATGTCACACTTCTCCTTaGTTTTCTGGTTCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: CCSTTSVTEQVEYAFRKICHTSP*FSGSLL
Trigger: GAGCAGAGAACCAGAAAACAAAGGAGAAGTGTGACA...TATTTTTCTAAATGCATACTCTACCTGTTCAGTTACACTCGTTGTGGAACAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp GTTTTCAGTTTATCTCAGTCTACTGTAGAAAATAACTTGTATGCCACAGTACCCAAGAGGCCAATATTTTaGTTGCCAACTCCACACTCA +
Preference number: 5 (lower is better)
Translates to: VFSLSQSTVENNLYATVPKRPIF*LPTPHS
Trigger: TGAGTGTGGAGTTGGCAACAAAAATATTGGCCTCTT...GGGTACTGTGGCATACAAGTTATTTTCTACAGTAGACTGAGATAAACTGAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp AATGTCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGTCTACGAGTTTGCTCTaGAGATTTTCCAGCTCAATG +
Preference number: 5 (lower is better)
Translates to: NVYSPCQYNNTNHVLIEKSTSLL*RFSSSM
Trigger: CATTGAGCTGGAAAATCTCAAGAGCAAACTCGTAGA...CTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TATCTTCACCATACTGTACATAAGAACTCTGATAAAATATGGTACTTGTGCCACTCTACGAGTTTGCTCTaGAGATTTTCCAGCTCAATG +
Preference number: 5 (lower is better)
Translates to: YLHHTVHKNSDKIWYLCHSTSLL*RFSSSM
Trigger: CATTGAGCTGGAAAATCTCAAGAGCAAACTCGTAGA...GTGGCACAAGTACCATATTTTATCAGAGTTCTTATGTACAGTATGGTGAAGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGGACTATTACTTCTACGAGTTaGCTCTTGAGATTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: STALANITTLIMCLLKRTITSTS*LLRFSS
Trigger: GCTGGAAAATCTCAAGAGCAAACTCGTAGAAGTAAT...AGTCCTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp AATGTCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGTACAACTGGTTCGGCTaGTTTTTCACCGTCAATGTA +
Preference number: 5 (lower is better)
Translates to: NVYSPCQYNNTNHVLIEKYNWFG*FFTVNV
Trigger: TACATTGACGGTGAAAAACAAGCCGAACCAGTTGTA...CTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp CAGTCTACTGTAGAAAATAACTTGTATGCCACAGTACCCAACAATTTCCATGCTGTATATAAGCTAATGTaGTTCCACAACGAGTGTAAC +
Preference number: 5 (lower is better)
Translates to: QSTVENNLYATVPNNFHAVYKLM*FHNECN
Trigger: GTTACACTCGTTGTGGAACAACATTAGCTTATATAC...AGCATGGAAATTGTTGGGTACTGTGGCATACAAGTTATTTTCTACAGTAGACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp AATGTCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGCTGCTTGATGAGTCTTaGAAGGTCAGTGATAATGAC +
Preference number: 5 (lower is better)
Translates to: NVYSPCQYNNTNHVLIEKLLDES*KVSDND
Trigger: GTCATTATCACTGACCTTCAAAGACTCATCAAGCAG...CTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TTACCAACTTACTACTGTAAAATTCAAGGTTTGGACTTTCACCTCAGTTCTGTAATATTCGCCTATTGCTaGCTCCTTCAGACTGGTAAT +
Preference number: 5 (lower is better)
Translates to: LPTYYCKIQGLDFHLSSVIFAYC*LLQTGN
Trigger: ATTACCAGTCTGAAGGAGCAAGCAATAGGCGAATAT...TACAGAACTGAGGTGAAAGTCCAAACCTTGAATTTTACAGTAGTAAGTTGGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCTTTAATTAAAATCTTATATCCATTGCCTGAATaGCTCTTTTGTAAGCCAGTG +
Preference number: 5 (lower is better)
Translates to: CLRPAHIQKGASALIKILYPLPE*LFCKPV
Trigger: CACTGGCTTACAAAAGAGCAATTCAGGCAATGGATA...TAAGATTTTAATTAAAGCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGGACTCTTTGTCTCTTTAGCTaGTTTTGCTCAATGAACATC +
Preference number: 5 (lower is better)
Translates to: STALANITTLIMCLLKRTLCLFS*FCSMNI
Trigger: GATGTTCATTGAGCAAAACAAGCTAAAGAGACAAAG...AGTCCTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGGACTTTCTTTGACCTTTTGTaGATGCTGAATTCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: STALANITTLIMCLLKRTFFDLL*MLNSLF
Trigger: GAAGAGAGAATTCAGCATCAACAAAAGGTCAAAGAA...AGTCCTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TGTTTGAGACCAGCTCACATACAAAAGGGTGCAAGTGCTTTAATTAAAATCTTAAGTTGCTGTTTGAGGTaGTGTATTTCTTTGTGGAGT +
Preference number: 5 (lower is better)
Translates to: CLRPAHIQKGASALIKILSCCLR*CISLWS
Trigger: ACTCCACAAAGAAATACACAACCTCAAACAGCAACT...TAAGATTTTAATTAAAGCACTTGCACCCTTTTGTATGTGAGCTGGTCTCAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp AATGTCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGAGTTGCTGTTTGAGGTaGTGTATTTCTTTGTGGAGT +
Preference number: 5 (lower is better)
Translates to: NVYSPCQYNNTNHVLIEKSCCLR*CISLWS
Trigger: ACTCCACAAAGAAATACACAACCTCAAACAGCAACT...CTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TATCTTCACCATACTGTACATAAGAACTCTGATAAAATATGGTACTTGTGCCACAGTTGCTGTTTGAGGTaGTGTATTTCTTTGTGGAGT +
Preference number: 5 (lower is better)
Translates to: YLHHTVHKNSDKIWYLCHSCCLR*CISLWS
Trigger: ACTCCACAAAGAAATACACAACCTCAAACAGCAACT...GTGGCACAAGTACCATATTTTATCAGAGTTCTTATGTACAGTATGGTGAAGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp TTACCAACTTACTACTGTAAAATTCAAGGTTTGGACTTTCACCTCAGTTCTGTAACTGTAGAAAATAACTaGTATGCCACAGTACCCAAC +
Preference number: 5 (lower is better)
Translates to: LPTYYCKIQGLDFHLSSVTVENN*YATVPN
Trigger: GTTGGGTACTGTGGCATACAAGTTATTTTCTACAGT...TACAGAACTGAGGTGAAAGTCCAAACCTTGAATTTTACAGTAGTAAGTTGGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp GTTTTCAGTTTATCTCAGTCTACTGTAGAAAATAACTTGTATGCCACAGTACCCGTATATAAGCTAATGTaGTTCCACAACGAGTGTAAC +
Preference number: 5 (lower is better)
Translates to: VFSLSQSTVENNLYATVPVYKLM*FHNECN
Trigger: GTTACACTCGTTGTGGAACAACATTAGCTTATATAC...GGGTACTGTGGCATACAAGTTATTTTCTACAGTAGACTGAGATAAACTGAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp AATGTCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGCTTTATTTAGCTTTGTaGCCAAAGCTTCAGCACTTT +
Preference number: 5 (lower is better)
Translates to: NVYSPCQYNNTNHVLIEKLYLAL*PKLQHF
Trigger: AAAGTGCTGAAGCTTTGGCAACAAAGCTAAATAAAG...CTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp AATGTCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGCTAGGAATGTGTGTTTaGCTAAACAGCTTACTTATG +
Preference number: 5 (lower is better)
Translates to: NVYSPCQYNNTNHVLIEKLGMCV*LNSLLM
Trigger: CATAAGTAAGCTGTTTAGCAAAACACACATTCCTAG...CTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS-3UTR CAA 90 bp AATGTCTACAGCCCTTGCCAATATAACAACACTAATCATGTGCTTATTGAAAAGAAAAATAATCCAGACTaGAAGGCTGTGATACAGACT +
Preference number: 5 (lower is better)
Translates to: NVYSPCQYNNTNHVLIEKKNNPD*KAVIQT
Trigger: AGTCTGTATCACAGCCTTCAAGTCTGGATTATTTTT...CTTTTCAATAAGCACATGATTAGTGTTGTTATATTGGCAAGGGCTGTAGACATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000615301.4
CDS GCA 72 bp GGGGGTGGAGGAACGAGGGCGGGTCGGCAGCCGCTATaGCAGCCTGTGGCTGCCGGCGCGGCAGGACGCGCT +
Preference number: 6 (lower is better)
Translates to: GGGGTRAGRQPL*QPVAAGAAGRA
Trigger: AGCGCGTCCTGCCGCGCCGGCAGCCACAGGCTGGCATAGCGGCTGCCGACCCGCCCTCGTTCCTCCACCCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000392903.3
CDS CCA 72 bp GAACGAGGGCGGGTCGGCAGCCGCTATGCCAGCCTGTaGCTGCCGGCGCGGCAGGACGCGCTGGTGGGAGGG +
Preference number: 6 (lower is better)
Translates to: ERGRVGSRYASL*LPARQDALVGG
Trigger: CCCTCCCACCAGCGCGTCCTGCCGCGCCGGCAGCCACAGGCTGGCATAGCGGCTGCCGACCCGCCCTCGTTC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000392903.3
CDS TCA 72 bp TCCCGCTCCTCCTCCTCCTGGCGCGGAGCGCGCGAGTaGGATCATCCCCACGCACCTACTCGGCGGCTGCGG +
Preference number: 6 (lower is better)
Translates to: SRSSSSWRGARE*DHPHAPTRRLR
Trigger: CCGCAGCCGCCGAGTAGGTGCGTGGGGATGATCTCACTCGCGCGCTCCGCGCCAGGAGGAGGAGGAGCGGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000392903.3
ENST00000615301.4
CDS CCA 72 bp AGATGCCGGTGGCTTGCGGCTCCACTACCCGGAAGTTaGATCCGCTCCCGCTCCTCCTCCTCCTGGCGCGGA +
Preference number: 6 (lower is better)
Translates to: RCRWLAAPLPGS*IRSRSSSSWRG
Trigger: TCCGCGCCAGGAGGAGGAGGAGCGGGAGCGGATCCAACTTCCGGGTAGTGGAGCCGCAAGCCACCGGCATCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000392903.3
ENST00000615301.4
CDS CAA 90 bp AGAAAAAGCAAGATGCCGGTGGCTTGCGGCTCCACTACCCGGAAGTaGGATCCGCTCCCGCTCCTCCTCCTCCTGGCGCGGAGCGCGCGA +
Preference number: 6 (lower is better)
Translates to: RKSKMPVACGSTTRK*DPLPLLLLLARSAR
Trigger: TCGCGCGCTCCGCGCCAGGAGGAGGAGGAGCGGGAGCGGATCCAACTTCCGGGTAGTGGAGCCGCAAGCCACCGGCATCTTGCTTTTTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000392903.3
ENST00000615301.4
CDS CAA 72 bp CGGCTGTGGGTTCGCAGCGTGTGTGGGAACTCCACTTaGGACGCTTCCCGGGGGTCGCTCCCAAAGAACCAC +
Preference number: 6 (lower is better)
Translates to: RLWVRSVCGNST*DASRGSLPKNH
Trigger: GTGGTTCTTTGGGAGCGACCCCCGGGAAGCGTCCAAAGTGGAGTTCCCACACACGCTGCGAACCCACAGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000392903.3
CDS GCA 72 bp GGAGGAGGGGGAAGAAAAAGCAAGATGCCGGTGGCTTaGGGCTCCACTACCCGGAAGTTGGATCCGCTCCCG +
Preference number: 6 (lower is better)
Translates to: GGGGRKSKMPVA*GSTTRKLDPLP
Trigger: CGGGAGCGGATCCAACTTCCGGGTAGTGGAGCCGCAAGCCACCGGCATCTTGCTTTTTCTTCCCCCTCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260777.14
ENST00000392903.3
ENST00000615301.4
CDS CCA 72 bp GGCTGTGGGTTCGCAGCGTGTGTGGGAACTCCACTTTaGACGCTTCCCGGGGGTCGCTCCCAAAGAACCACA +
Preference number: 6 (lower is better)
Translates to: GCGFAACVGTPL*TLPGGRSQRTT
Trigger: TGTGGTTCTTTGGGAGCGACCCCCGGGAAGCGTCCAAAGTGGAGTTCCCACACACGCTGCGAACCCACAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000392903.3
CDS CCA 72 bp GTTCAGAGAAAACCGGCTGTGGGTTCGCAGCGTGTGTaGGAACTCCACTTTGGACGCTTCCCGGGGGTCGCT +
Preference number: 6 (lower is better)
Translates to: VQRKPAVGSQRV*ELHFGRFPGVA
Trigger: AGCGACCCCCGGGAAGCGTCCAAAGTGGAGTTCCCACACACGCTGCGAACCCACAGCCGGTTTTCTCTGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000392903.3
CDS CAA 90 bp GGGTGGGATCGTTTCCGGATCATGGACATGAGGGATCGGATAGGATaGGGAGGTGGAGGGGGAAGTGGTGGTGGAGGAGGAGGTGGTGGA +
Preference number: 6 (lower is better)
Translates to: GWDRFRIMDMRDRIG*GGGGGSGGGGGGGG
Trigger: TCCACCACCTCCTCCTCCACCACCACTTCCCCCTCCACCTCCCAATCCTATCCGATCCCTCATGTCCATGATCCGGAAACGATCCCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000392901.10
ENST00000392903.3
ENST00000497044.5
ENST00000615301.4
CDS CCA 72 bp CGGACTCAGGGACGCGAGTTCAGAGAAAACCGGCTGTaGGTTCGCAGCGTGTGTGGGAACTCCACTTTGGAC +
Preference number: 6 (lower is better)
Translates to: RTQGREFRENRL*VRSVCGNSTLD
Trigger: GTCCAAAGTGGAGTTCCCACACACGCTGCGAACCCACAGCCGGTTTTCTCTGAACTCGCGTCCCTGAGTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000392903.3
CDS CAA 90 bp AGAGAAAACCGGCTGTGGGTTCGCAGCGTGTGTGGGAACTCCACTTaGGACGCTTCCCGGGGGTCGCTCCCAAAGAACCACAGAGGTAGA +
Preference number: 6 (lower is better)
Translates to: RENRLWVRSVCGNST*DASRGSLPKNHRGR
Trigger: TCTACCTCTGTGGTTCTTTGGGAGCGACCCCCGGGAAGCGTCCAAAGTGGAGTTCCCACACACGCTGCGAACCCACAGCCGGTTTTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260777.14
ENST00000392903.3
CDS CAA 90 bp CTGGTAATGAGCTGCAGCTGCTTCTCTTCGTCCGAGCTGTTCATTTaGGCGGGTGGGGCCGGGAATAAAAGGGAAAGAGGGAGCGGCGCG +
Preference number: 6 (lower is better)
Translates to: LVMSCSCFSSSELFI*AGGAGNKRERGSGA
Trigger: CGCGCCGCTCCCTCTTTCCCTTTTATTCCCGGCCCCACCCGCCAAAATGAACAGCTCGGACGAAGAGAAGCAGCTGCAGCTCATTACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000392903.3
ENST00000615301.4
CDS CAA 72 bp AGCTGCAGCTGCTTCTCTTCGTCCGAGCTGTTCATTTaGGCGGGTGGGGCCGGGAATAAAAGGGAAAGAGGG +
Preference number: 6 (lower is better)
Translates to: SCSCFSSSELFI*AGGAGNKRERG
Trigger: CCCTCTTTCCCTTTTATTCCCGGCCCCACCCGCCAAAATGAACAGCTCGGACGAAGAGAAGCAGCTGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000392903.3
ENST00000615301.4
CDS CCA 72 bp GTTGCCTTTTCTTTCTTAGCACCACTGCCACTGGGGTaGGATCGTTTCCGGATCATGGACATGAGGGATCGG +
Preference number: 6 (lower is better)
Translates to: VAFSFLAPLPLG*DRFRIMDMRDR
Trigger: CCGATCCCTCATGTCCATGATCCGGAAACGATCCCACCCCAGTGGCAGTGGTGCTAAGAAAGAAAAGGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000392901.10
ENST00000392903.3
ENST00000497044.5
ENST00000615301.4
CDS GCA 72 bp TGGACTCTGAGGTGGCTAATATCCCAGTTGGACTACTaGTATCTGCTTCTGCTGTCACCTTTCTGCGACGCA +
Preference number: 6 (lower is better)
Translates to: WTLRWLISQLDY*YLLLLSPFCDA
Trigger: TGCGTCGCAGAAAGGTGACAGCAGAAGCAGATAGCAGTAGTCCAACTGGGATATTAGCCACCTCAGAGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000392901.10
ENST00000392903.3
ENST00000497044.5
CDS CCA 72 bp GGAGGAGGAGGTGGTGGAGGTACTGAATTCTCAGACTaGTTCACTCGTTTCTGGAGTTCATCAACAGAGTGC +
Preference number: 6 (lower is better)
Translates to: GGGGGGGTEFSD*FTRFWSSSTEC
Trigger: GCACTCTGTTGATGAACTCCAGAAACGAGTGAACCAGTCTGAGAATTCAGTACCTCCACCACCTCCTCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000392901.10
ENST00000392903.3
ENST00000497044.5
ENST00000615301.4
CDS GCA 72 bp TCGCCTATTGCTTGCTCCTTCAGACTGGTAATGAGCTaGAGCTGCTTCTCTTCGTCCGAGCTGTTCATTTTG +
Preference number: 6 (lower is better)
Translates to: SPIACSFRLVMS*SCFSSSELFIL
Trigger: CAAAATGAACAGCTCGGACGAAGAGAAGCAGCTGCAGCTCATTACCAGTCTGAAGGAGCAAGCAATAGGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355371.9
ENST00000392903.3
ENST00000615301.4
CDS GCA 72 bp TTTTGTCACACTTGCTCCTTCAGACTGGTAATGAGCTaGAGCTGCTTCTCTTCGTCCGAGCTGTTCATTTTG +
Preference number: 6 (lower is better)
Translates to: FCHTCSFRLVMS*SCFSSSELFIL
Trigger: CAAAATGAACAGCTCGGACGAAGAGAAGCAGCTGCAGCTCATTACCAGTCTGAAGGAGCAAGTGTGACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260777.14
CDS CCA 72 bp TTACACTGGATACAGAACCCAACACTGGCATGGATTTaGACTCTGAGGTGGCTAATATCCCAGTTGGACTAC +
Preference number: 6 (lower is better)
Translates to: LHWIQNPTLAWI*TLRWLISQLDY
Trigger: GTAGTCCAACTGGGATATTAGCCACCTCAGAGTCCAAATCCATGCCAGTGTTGGGTTCTGTATCCAGTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000392901.10
ENST00000392903.3
ENST00000497044.5
CDS CAA 72 bp GTTACACTGGATACAGAACCCAACACTGGCATGGATTaGGACTCTGAGGTGGCTAATATCCCAGTTGGACTA +
Preference number: 6 (lower is better)
Translates to: VTLDTEPNTGMD*DSEVANIPVGL
Trigger: TAGTCCAACTGGGATATTAGCCACCTCAGAGTCCAAATCCATGCCAGTGTTGGGTTCTGTATCCAGTGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000392901.10
ENST00000392903.3
ENST00000497044.5
CDS CAA 90 bp GCTGTTTTTGTTACACTGGATACAGAACCCAACACTGGCATGGATTaGGACTCTGAGGTGGCTAATATCCCAGTTGGACTACTGCTATCT +
Preference number: 6 (lower is better)
Translates to: AVFVTLDTEPNTGMD*DSEVANIPVGLLLS
Trigger: AGATAGCAGTAGTCCAACTGGGATATTAGCCACCTCAGAGTCCAAATCCATGCCAGTGTTGGGTTCTGTATCCAGTGTAACAAAAACAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000392901.10
ENST00000392903.3
ENST00000497044.5
CDS CCA 72 bp TTTCGTCTAAAGCTTTCAAAAGCTGCTGATCAGGGATaGAGCTCTGCAGCAGAAGGTGGCTTTGTCTCTTTA +
Preference number: 6 (lower is better)
Translates to: FRLKLSKAADQG*SSAAEGGFVSL
Trigger: TAAAGAGACAAAGCCACCTTCTGCTGCAGAGCTCCATCCCTGATCAGCAGCTTTTGAAAGCTTTAGACGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000392901.10
ENST00000392903.3
ENST00000497044.5
ENST00000615301.4
CDS GCA 72 bp TTGGACTACTGCTATCTGCTTCTGCTGTCACCTTTCTaGGACGCAAAATCCTTTCTAACTCAGTTTCACTGT +
Preference number: 6 (lower is better)
Translates to: LDYCYLLLLSPF*DAKSFLTQFHC
Trigger: ACAGTGAAACTGAGTTAGAAAGGATTTTGCGTCGCAGAAAGGTGACAGCAGAAGCAGATAGCAGTAGTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000392901.10
ENST00000392903.3
ENST00000497044.5
CDS CCA 72 bp TTTTTGTTACACTGGATACAGAACCCAACACTGGCATaGATTTGGACTCTGAGGTGGCTAATATCCCAGTTG +
Preference number: 6 (lower is better)
Translates to: FLLHWIQNPTLA*IWTLRWLISQL
Trigger: CAACTGGGATATTAGCCACCTCAGAGTCCAAATCCATGCCAGTGTTGGGTTCTGTATCCAGTGTAACAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000392901.10
ENST00000392903.3
ENST00000497044.5
CDS CCA 72 bp TTCATCATCAATGTTTATCTCTTCAGTTATTACATCTaGTCCCAGCTTGGCCATGTACAACATGCTGATTCT +
Preference number: 6 (lower is better)
Translates to: FIINVYLFSYYI*SQLGHVQHADS
Trigger: AGAATCAGCATGTTGTACATGGCCAAGCTGGGACCAGATGTAATAACTGAAGAGATAAACATTGATGATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000392901.10
ENST00000392903.3
ENST00000490615.1
ENST00000497044.5
ENST00000615301.4
CDS CAA 72 bp ATGTTTATCTCTTCAGTTATTACATCTGGTCCCAGCTaGGCCATGTACAACATGCTGATTCTTTTCAACGTT +
Preference number: 6 (lower is better)
Translates to: MFISSVITSGPS*AMYNMLILFNV
Trigger: AACGTTGAAAAGAATCAGCATGTTGTACATGGCCAAGCTGGGACCAGATGTAATAACTGAAGAGATAAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000392901.10
ENST00000392903.3
ENST00000490615.1
ENST00000497044.5
ENST00000615301.4
CDS TCA 72 bp CCTTTTTATCTTCCTCTAGAAGCTCCAGTTGCTGTTTaGGGTTGTGTATTTCTTTGTGGAGTGTTTCATTTT +
Preference number: 6 (lower is better)
Translates to: PFYLPLEAPVAV*GCVFLCGVFHF
Trigger: AAAATGAAACACTCCACAAAGAAATACACAACCTCAAACAGCAACTGGAGCTTCTAGAGGAAGATAAAAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260777.14
ENST00000355371.9
ENST00000392901.10
ENST00000392903.3
ENST00000497044.5
ENST00000615301.4
CDS CAA 72 bp CCACTAGGATGGAATTCCTTTCACTCTCTTTCTCTTTaGGTGTTCTTCTTTCTTCCAATTCAAAGTTCTTTC +
Preference number: 6 (lower is better)
Translates to: PLGWNSFHSLSL*VFFFLPIQSSF
Trigger: GAAAGAACTTTGAATTGGAAGAAAGAAGAACACCAAAAGAGAAAGAGAGTGAAAGGAATTCCATCCTAGTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497044.5
CDS CAA 90 bp AAATCATTCCCACTAGGATGGAATTCCTTTCACTCTCTTTCTCTTTaGGTGTTCTTCTTTCTTCCAATTCAAAGTTCTTTCCCTCCAATT +
Preference number: 6 (lower is better)
Translates to: KSFPLGWNSFHSLSL*VFFFLPIQSSFPPI
Trigger: AATTGGAGGGAAAGAACTTTGAATTGGAAGAAAGAAGAACACCAAAAGAGAAAGAGAGTGAAAGGAATTCCATCCTAGTGGGAATGATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497044.5