RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SHROOM4 (Homo sapiens)

Ensembl gene IDs: ENSG00000158352

Ensembl transcript IDs: ENST00000289292.11, ENST00000376020.8, ENST00000460112.3, ENST00000484922.1

Found 1448 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGTGGCCAGAAATGGGCCCAGCTTCCTCCATCTGGGGCTTGCTACTaGCAGAGCAGCACTGTCAGGGAGGGTCGGGTTCAGGATGTGGCT +
Preference number: 1 (lower is better)
Translates to: SGQKWAQLPPSGACY*QSSTVREGRVQDVA
Trigger: AGCCACATCCTGAACCCGACCCTCCCTGACAGTGCTGCTCTGCCAGTAGCAAGCCCCAGATGGAGGAAGCTGGGCCCATTTCTGGCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR CCA 90 bp CCAAATGGGTGGAAGTGGCCAGAAATGGGCCCAGCTTCCTCCATCTaGGGCTTGCTACTGGCAGAGCAGCACTGTCAGGGAGGGTCGGGT +
Preference number: 1 (lower is better)
Translates to: PNGWKWPEMGPASSI*GLLLAEQHCQGGSG
Trigger: ACCCGACCCTCCCTGACAGTGCTGCTCTGCCAGTAGCAAGCCCCAGATGGAGGAAGCTGGGCCCATTTCTGGCCACTTCCACCCATTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR CCA 90 bp CCAGGTGAATGCCCTCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTaGCCACAAGCCCTGGGGCAGAGTAGAGCTGCAAGGCAGATTCCC +
Preference number: 1 (lower is better)
Translates to: PGECPQGSQLSVRNG*PQALGQSRAARQIP
Trigger: GGGAATCTGCCTTGCAGCTCTACTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGAGGGCATTCACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
3UTR GCA 90 bp CCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCAGGTGAATaGCCTCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAA +
Preference number: 1 (lower is better)
Translates to: PLQSLGEALKLVPGE*PQGSQLSVRNGWPQ
Trigger: TTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGAGGGCATTCACCTGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
3UTR CCA 90 bp CCTAAGATCCTGGCTGGGTCTTCAATTGCTCTGGGGAGCTGGCTCTaGCTGGAGCTCCCAGCTACCTTGAGTTTTGGTTCCCTTGAGCCA +
Preference number: 1 (lower is better)
Translates to: PKILAGSSIALGSWL*LELPATLSFGSLEP
Trigger: TGGCTCAAGGGAACCAAAACTCAAGGTAGCTGGGAGCTCCAGCCAGAGCCAGCTCCCCAGAGCAATTGAAGACCCAGCCAGGATCTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR TCA 90 bp CTGGCTCTGGCTGGAGCTCCCAGCTACCTTGAGTTTTGGTTCCCTTaGGCCAGGCCACAGGCTGAGAAAGCAATGGTTAGAGGAGTTCCT +
Preference number: 1 (lower is better)
Translates to: LALAGAPSYLEFWFP*ARPQAEKAMVRGVP
Trigger: AGGAACTCCTCTAACCATTGCTTTCTCAGCCTGTGGCCTGGCTCAAGGGAACCAAAACTCAAGGTAGCTGGGAGCTCCAGCCAGAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR TCA 90 bp GCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATaGGACTGCCCTGGCAGGAGTGTGGCACGCCAGTGTCTGTTTAGC +
Preference number: 1 (lower is better)
Translates to: ASQVILAVLQHRHTQ*DCPGRSVARQCLFS
Trigger: GCTAAACAGACACTGGCGTGCCACACTCCTGCCAGGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR GCA 90 bp GCAGAAGTTAAGACTGATAACTGTCTTTGGGGATCTCCCTTGGCCTaGCTTCCAAACTGCTACTCACTGGCAGGCCTTGGAGGAGGGCTG +
Preference number: 1 (lower is better)
Translates to: AEVKTDNCLWGSPLA*LPNCYSLAGLGGGL
Trigger: CAGCCCTCCTCCAAGGCCTGCCAGTGAGTAGCAGTTTGGAAGGCAGGCCAAGGGAGATCCCCAAAGACAGTTATCAGTCTTAACTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR CCA 90 bp TGTATGCCTAAGATCCTGGCTGGGTCTTCAATTGCTCTGGGGAGCTaGCTCTGGCTGGAGCTCCCAGCTACCTTGAGTTTTGGTTCCCTT +
Preference number: 1 (lower is better)
Translates to: CMPKILAGSSIALGS*LWLELPATLSFGSL
Trigger: AAGGGAACCAAAACTCAAGGTAGCTGGGAGCTCCAGCCAGAGCCAGCTCCCCAGAGCAATTGAAGACCCAGCCAGGATCTTAGGCATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR CCA 90 bp ACAACTATGGCCTCCATTGAAAGCACTCCCCTACCTTCTCAATCTTaGCTGGCTTGTGTAAGCCTAGCCCCTGCAAGCCACCAGCCTTCC +
Preference number: 1 (lower is better)
Translates to: TTMASIESTPLPSQS*LACVSLAPASHQPS
Trigger: GGAAGGCTGGTGGCTTGCAGGGGCTAGGCTTACACAAGCCAGCCAAGATTGAGAAGGTAGGGGAGTGCTTTCAATGGAGGCCATAGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR CCA 90 bp GCACTGTCAGGGAGGGTCGGGTTCAGGATGTGGCTCTGGTGTGCCTaGGCAGCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTG +
Preference number: 1 (lower is better)
Translates to: ALSGRVGFRMWLWCA*AALWHMRLNGKQNL
Trigger: CAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGCTGCCCAGGCACACCAGAGCCACATCCTGAACCCGACCCTCCCTGACAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR GCA 90 bp AGCAGCACTGTCAGGGAGGGTCGGGTTCAGGATGTGGCTCTGGTGTaGCTGGGCAGCTTTATGGCACATGAGGTTAAATGGAAAACAGAA +
Preference number: 1 (lower is better)
Translates to: SSTVREGRVQDVALV*LGSFMAHEVKWKTE
Trigger: TTCTGTTTTCCATTTAACCTCATGTGCCATAAAGCTGCCCAGGCACACCAGAGCCACATCCTGAACCCGACCCTCCCTGACAGTGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR CCA 90 bp TGTTGCAGCACCGTCACACACAATGAGACTGCCCTGGCAGGAGTGTaGCACGCCAGTGTCTGTTTAGCAGTTCACCTTTATCTACCAAGC +
Preference number: 1 (lower is better)
Translates to: CCSTVTHNETALAGV*HASVCLAVHLYLPS
Trigger: GCTTGGTAGATAAAGGTGAACTGCTAAACAGACACTGGCGTGCCACACTCCTGCCAGGGCAGTCTCATTGTGTGTGACGGTGCTGCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR CCA 90 bp AATATTATTGGCATAGACGACTCCTCTGGCAAAGCTCCAAATGGGTaGAAGTGGCCAGAAATGGGCCCAGCTTCCTCCATCTGGGGCTTG +
Preference number: 1 (lower is better)
Translates to: NIIGIDDSSGKAPNG*KWPEMGPASSIWGL
Trigger: CAAGCCCCAGATGGAGGAAGCTGGGCCCATTTCTGGCCACTTCCACCCATTTGGAGCTTTGCCAGAGGAGTCGTCTATGCCAATAATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR CCA 90 bp CAGAAATATTATTGGCATAGACGACTCCTCTGGCAAAGCTCCAAATaGGTGGAAGTGGCCAGAAATGGGCCCAGCTTCCTCCATCTGGGG +
Preference number: 1 (lower is better)
Translates to: QKYYWHRRLLWQSSK*VEVARNGPSFLHLG
Trigger: CCCCAGATGGAGGAAGCTGGGCCCATTTCTGGCCACTTCCACCCATTTGGAGCTTTGCCAGAGGAGTCGTCTATGCCAATAATATTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR CCA 90 bp AGGGTCGGGTTCAGGATGTGGCTCTGGTGTGCCTGGGCAGCTTTATaGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTG +
Preference number: 1 (lower is better)
Translates to: RVGFRMWLWCAWAAL*HMRLNGKQNLNLTL
Trigger: CAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGCTGCCCAGGCACACCAGAGCCACATCCTGAACCCGACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR CCA 90 bp GATGTCTTTGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTaGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAG +
Preference number: 1 (lower is better)
Translates to: DVFGVLVQSRMKALP*FSVQQVLALGNCGK
Trigger: CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCAAAGACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
3UTR CCA 90 bp CATCGTCCACCTGAGGGCTGCTTTTCCAGCATAGAAACTAGCTACTaGTGTCAGGGCCTTGGCAACAGCAGCAGTTTTAGTTGTTTGTAT +
Preference number: 1 (lower is better)
Translates to: HRPPEGCFSSIETSY*CQGLGNSSSFSCLY
Trigger: ATACAAACAACTAAAACTGCTGCTGTTGCCAAGGCCCTGACACCAGTAGCTAGTTTCTATGCTGGAAAAGCAGCCCTCAGGTGGACGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR CCA 90 bp TATAATATGCTGTTGCAGAAATATTATTGGCATAGACGACTCCTCTaGCAAAGCTCCAAATGGGTGGAAGTGGCCAGAAATGGGCCCAGC +
Preference number: 1 (lower is better)
Translates to: YNMLLQKYYWHRRLL*QSSKWVEVARNGPS
Trigger: GCTGGGCCCATTTCTGGCCACTTCCACCCATTTGGAGCTTTGCCAGAGGAGTCGTCTATGCCAATAATATTTCTGCAACAGCATATTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR TCA 90 bp TTCAATGTCAGAGTTGCTTCCTGGAATACATTTGAGTCTAATCTTTaGGGTTGCCTTGGAGAGCAGATCACCAAGGCCCTTGCTTTCCAG +
Preference number: 1 (lower is better)
Translates to: FNVRVASWNTFESNL*GCLGEQITKALAFQ
Trigger: CTGGAAAGCAAGGGCCTTGGTGATCTGCTCTCCAAGGCAACCTCAAAGATTAGACTCAAATGTATTCCAGGAAGCAACTCTGACATTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR TCA 90 bp TCAATTTGCTCATTGTTTGTCCTAGAGCCTGCTCAGAAGAAAAGATaGCAACTATGGCCTCCATTGAAAGCACTCCCCTACCTTCTCAAT +
Preference number: 1 (lower is better)
Translates to: SICSLFVLEPAQKKR*QLWPPLKALPYLLN
Trigger: ATTGAGAAGGTAGGGGAGTGCTTTCAATGGAGGCCATAGTTGTCATCTTTTCTTCTGAGCAGGCTCTAGGACAAACAATGAGCAAATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR TCA 90 bp TTATTCTGTCAGATTCTACTTGGGCATTTACAGCTATATCCTGGTTaGGTCTCCAGCTGTGGGACTCAGGAAGATTCAATTATCCAGAGC +
Preference number: 1 (lower is better)
Translates to: LFCQILLGHLQLYPG*VSSCGTQEDSIIQS
Trigger: GCTCTGGATAATTGAATCTTCCTGAGTCCCACAGCTGGAGACTCAACCAGGATATAGCTGTAAATGCCCAAGTAGAATCTGACAGAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR GCA 90 bp GTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTaGTATCTACTTGCTGAGAAACTGCTAACAAAGAAGATTGAAAGC +
Preference number: 1 (lower is better)
Translates to: VVRDIQGRGLEQTAN*YLLAEKLLTKKIES
Trigger: GCTTTCAATCTTCTTTGTTAGCAGTTTCTCAGCAAGTAGATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
3UTR GCA 90 bp CCCAATACAGGACATCTCAATTTGCTCATTGTTTGTCCTAGAGCCTaGTCAGAAGAAAAGATGACAACTATGGCCTCCATTGAAAGCACT +
Preference number: 1 (lower is better)
Translates to: PNTGHLNLLIVCPRA*SEEKMTTMASIEST
Trigger: AGTGCTTTCAATGGAGGCCATAGTTGTCATCTTTTCTTCTGAGCAGGCTCTAGGACAAACAATGAGCAAATTGAGATGTCCTGTATTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR CCA 90 bp TGTCTTATTCTGTCAGATTCTACTTGGGCATTTACAGCTATATCCTaGTTGAGTCTCCAGCTGTGGGACTCAGGAAGATTCAATTATCCA +
Preference number: 1 (lower is better)
Translates to: CLILSDSTWAFTAIS*LSLQLWDSGRFNYP
Trigger: TGGATAATTGAATCTTCCTGAGTCCCACAGCTGGAGACTCAACCAGGATATAGCTGTAAATGCCCAAGTAGAATCTGACAGAATAAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR CCA 90 bp CTATCAGCTAGAAGTAAGATGAAAATACTAGACAGAATTCAAGATTaGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCTAGAC +
Preference number: 1 (lower is better)
Translates to: LSARSKMKILDRIQD*KKSRKNGLPSIRLD
Trigger: GTCTAGCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGTCTAGTATTTTCATCTTACTTCTAGCTGATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR CAA 90 bp GGGTGGAAGTGGCCAGAAATGGGCCCAGCTTCCTCCATCTGGGGCTaGCTACTGGCAGAGCAGCACTGTCAGGGAGGGTCGGGTTCAGGA +
Preference number: 2 (lower is better)
Translates to: GWKWPEMGPASSIWG*LLAEQHCQGGSGSG
Trigger: TCCTGAACCCGACCCTCCCTGACAGTGCTGCTCTGCCAGTAGCAAGCCCCAGATGGAGGAAGCTGGGCCCATTTCTGGCCACTTCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGCCAGGGTCTCCTAGCTaGTTAGGACCACTGCTAGGG +
Preference number: 2 (lower is better)
Translates to: SRQPALCEKWLATSPGAEPGSPS*LGPLLG
Trigger: CCCTAGCAGTGGTCCTAACCAGCTAGGAGACCCTGG...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGAAAGCACTTCCCACATaGCTGGGCAGGGATGCTGTG +
Preference number: 2 (lower is better)
Translates to: SRQPALCEKWLATSPGAEKALPT*LGRDAV
Trigger: CACAGCATCCCTGCCCAGCCATGTGGGAAGTGCTTT...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR TCA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCCCTGCAAAGCTTGGGTaGGGCCCTGAAACTGGTGCC +
Preference number: 2 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLAPAKLG*GPETGA
Trigger: GGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGG...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR GCA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCCTGGTGCCAGGTGAATaGCCTCAAGGCAGCCAGCTC +
Preference number: 2 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLALVPGE*PQGSQL
Trigger: GAGCTGGCTGCCTTGAGGGCATTCACCTGGCACCAG...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCGCTGGCCACAAGCCCTaGGGCAGAGTAGAGCTGCAA +
Preference number: 2 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLAAGHKP*GRVELQ
Trigger: TTGCAGCTCTACTCTGCCCCAGGGCTTGTGGCCAGC...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGCTGGGGAGCTGGCTCTaGCTGGAGCTCCCAGCTACC +
Preference number: 2 (lower is better)
Translates to: RTGERDCISSNTGSVAAPLGSWL*LELPAT
Trigger: GGTAGCTGGGAGCTCCAGCCAGAGCCAGCTCCCCAG...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR TCA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCGCTTGGGTGAGGCCCTaGAACTGGTGCCAGGTGAAT +
Preference number: 2 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLAAWVRP*NWCQVN
Trigger: ATTCACCTGGCACCAGTTTCAGGGCCTCACCCAAGC...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR TCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTACCTGCAAAGCTTGGGTaGGGCCCTGAAACTGGTGCC +
Preference number: 2 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVPAKLG*GPETGA
Trigger: GGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGG...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR TCA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCGTAGGCCTCTTCCCCTaGACTTGCTGCTGGGAAAGG +
Preference number: 2 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLAVGLFP*TCCWER
Trigger: CCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTAC...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR GCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTACTGGTGCCAGGTGAATaGCCTCAAGGCAGCCAGCTC +
Preference number: 2 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVLVPGE*PQGSQL
Trigger: GAGCTGGCTGCCTTGAGGGCATTCACCTGGCACCAG...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGTCCAGGGTAGAGGGCTaGAACAAACTGCTAATTGCT +
Preference number: 2 (lower is better)
Translates to: SRQPALCEKWLATSPGAESRVEG*NKLLIA
Trigger: AGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGA...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTATCTGTGAGAAATGGCTaGCCACAAGCCCTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVSVRNG*PQALGQ
Trigger: CTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGA...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR GCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGATGGCTGGGCAGGGATaGTGTGGCAGAGTGCTGGTA +
Preference number: 2 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLMAGQG*CGRVLV
Trigger: TACCAGCACTCTGCCACAGCATCCCTGCCCAGCCAT...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR GCA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCCTGGTGCCAGGTGAATaGCCTCAAGGCAGCCAGCTC +
Preference number: 2 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPLVPGE*PQGSQL
Trigger: GAGCTGGCTGCCTTGAGGGCATTCACCTGGCACCAG...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR GCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAACTCTGTGCTTTCCCCTaGAAAGCTTGGGTGAGGCCC +
Preference number: 2 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQLCAFP*KAWVRP
Trigger: GGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAG...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAACCAGGGTCTCCTAGCTaGTTAGGACCACTGCTAGGG +
Preference number: 2 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQPGSPS*LGPLLG
Trigger: CCCTAGCAGTGGTCCTAACCAGCTAGGAGACCCTGG...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR TCA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACGCTTGGGTGAGGCCCTaGAACTGGTGCCAGGTGAAT +
Preference number: 2 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDAWVRP*NWCQVN
Trigger: ATTCACCTGGCACCAGTTTCAGGGCCTCACCCAAGC...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR TCA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACGTAGGCCTCTTCCCCTaGACTTGCTGCTGGGAAAGG +
Preference number: 2 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDVGLFP*TCCWER
Trigger: CCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTAC...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR GCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATATGGCTGGGCAGGGATaGTGTGGCAGAGTGCTGGTA +
Preference number: 2 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYMAGQG*CGRVLV
Trigger: TACCAGCACTCTGCCACAGCATCCCTGCCCAGCCAT...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGCAGGATGGAGTGCAGTaGTGTGGTCTCAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: RTGERDCISSNTGSVAAPQDGVQ*CGLSSL
Trigger: CAGTGAGCTGAGACCACACCACTGCACTCCATCCTG...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376020.8
3UTR-3UTR CCA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACGGTCTTCAATTGCTCTaGGGAGCTGGCTCTGGCTGG +
Preference number: 2 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDGLQLL*GAGSGW
Trigger: CCAGCCAGAGCCAGCTCCCCAGAGCAATTGAAGACC...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACCAAACTGCTACTCACTaGCAGGCCTTGGAGGAGGGC +
Preference number: 2 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDQTATH*QALEEG
Trigger: GCCCTCCTCCAAGGCCTGCCAGTGAGTAGCAGTTTG...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR TCA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCCTTGGCTGGGTTGTGTaGTACCAAGGATTGGCCCCA +
Preference number: 2 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPLGWVV*YQGLAP
Trigger: TGGGGCCAATCCTTGGTATCACACAACCCAGCCAAG...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAATTCCTAAGGGGCACCTaGGGGTACTCAACCTTTGCT +
Preference number: 2 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQFLRGT*GYSTFA
Trigger: AGCAAAGGTTGAGTACCCCCAGGTGCCCCTTAGGAA...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR TCA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCTGGGTGATGAGTACTTaGTGTCTTTGGTGTCCTAGT +
Preference number: 2 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLAWVMST*CLWCPS
Trigger: ACTAGGACACCAAAGACATCAAGTACTCATCACCCA...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR TCA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTCCTGCAAAGCTTGGGTaGGGCCCTGAAACTGGTGCC +
Preference number: 2 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPPAKLG*GPETGA
Trigger: GGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGG...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
3UTR-3UTR TCA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCACAGTAGGGAGGCTCTaGGTTCAAGGGGAAAACTCC +
Preference number: 2 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPTVGRL*VQGENS
Trigger: GGAGTTTTCCCCTTGAACTCAGAGCCTCCCTACTGT...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR TCA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGAACTATGGCCTCCATTaGAAGCACTCCCCTACCTTC +
Preference number: 2 (lower is better)
Translates to: RTGERDCISSNTGSVAAPNYGLH*KHSPTF
Trigger: GAAGGTAGGGGAGTGCTTTCAATGGAGGCCATAGTT...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR TCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGGCCTTGGAGGAGGGCTaGGCCCAGGAACTGAGAACA +
Preference number: 2 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMALEEG*AQELRT
Trigger: TGTTCTCAGTTCCTGGGCTCAGCCCTCCTCCAAGGC...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376020.8
3UTR-3UTR GCA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTGTGCAGCAAGTACTTaGCCTTGGCAACTGTGGGAA +
Preference number: 2 (lower is better)
Translates to: RTGERDCISSNTGSVAAPCAAST*PWQLWE
Trigger: TTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACA...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCTTGCTGCAGCTCCCTTaGGTAGAAGCTTGTGGCTTC +
Preference number: 2 (lower is better)
Translates to: LVRNRELSWITGQHLAITLLQLP*VEACGF
Trigger: GAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAA...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTGCTGGCCACAAGCCCTaGGGCAGAGTAGAGCTGCAA +
Preference number: 2 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPAGHKP*GRVELQ
Trigger: TTGCAGCTCTACTCTGCCCCAGGGCTTGTGGCCAGC...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
3UTR-3UTR CCA 90 bp ATGAAACATATCAGCCTCATCCTCCCAATACAGGACATCTCAATTTGCTCATTGCTGGGGAGCTGGCTCTaGCTGGAGCTCCCAGCTACC +
Preference number: 2 (lower is better)
Translates to: MKHISLILPIQDISICSLLGSWL*LELPAT
Trigger: GGTAGCTGGGAGCTCCAGCCAGAGCCAGCTCCCCAG...CAATGAGCAAATTGAGATGTCCTGTATTGGGAGGATGAGGCTGATATGTTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCCACTGGAGGGGAGAATaGCAGGGTTGCCATTCTAAC +
Preference number: 2 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPHWRGE*QGCHSN
Trigger: GTTAGAATGGCAACCCTGCCATTCTCCCCTCCAGTG...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGGTCGGGTTCAGGATGTaGCTCTGGTGTGCCTGGGCA +
Preference number: 2 (lower is better)
Translates to: IRLDSRTRLCILLRSIPEVGFRM*LWCAWA
Trigger: TGCCCAGGCACACCAGAGCCACATCCTGAACCCGAC...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR CAA 90 bp GAGTTGCTTCCTGGAATACATTTGAGTCTAATCTTTGAGGTTGCCTaGGAGAGCAGATCACCAAGGCCCTTGCTTTCCAGGGAGCTGAGC +
Preference number: 2 (lower is better)
Translates to: ELLPGIHLSLIFEVA*ESRSPRPLLSRELS
Trigger: GCTCAGCTCCCTGGAAAGCAAGGGCCTTGGTGATCTGCTCTCCAAGGCAACCTCAAAGATTAGACTCAAATGTATTCCAGGAAGCAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR TCA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTGTAGGCCTCTTCCCCTaGACTTGCTGCTGGGAAAGG +
Preference number: 2 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPVGLFP*TCCWER
Trigger: CCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTAC...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
3UTR-3UTR TCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCCTGCTGCTACAGTTaGCCTTCAAGGACCCTGAGG +
Preference number: 2 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMPCCYS*PSRTLR
Trigger: CCTCAGGGTCCTTGAAGGTCAACTGTAGCAGCAGGG...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376020.8
3UTR-3UTR TCA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCAACTATGGCCTCCATTaGAAGCACTCCCCTACCTTC +
Preference number: 2 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPNYGLH*KHSPTF
Trigger: GAAGGTAGGGGAGTGCTTTCAATGGAGGCCATAGTT...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAATCCAGGGTAGAGGGCTaGAACAAACTGCTAATTGCT +
Preference number: 2 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQSRVEG*NKLLIA
Trigger: AGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGA...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCAAAATGCTTTCCTTCTaGGCTAACTTTTCCCTCTCC +
Preference number: 2 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLAKMLSF*ANFSLS
Trigger: GGAGAGGGAAAAGTTAGCCCAGAAGGAAAGCATTTT...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTAGCCTCCCGAGTAGCTaGGACTACTGGTGCGTGCCA +
Preference number: 2 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSSLPSS*DYWCVP
Trigger: TGGCACGCACCAGTAGTCCCAGCTACTCGGGAGGCT...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376020.8
3UTR-3UTR CCA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGGTATGCCTAAGATCCTaGCTGGGTCTTCAATTGCTC +
Preference number: 2 (lower is better)
Translates to: RTGERDCISSNTGSVAAPVCLRS*LGLQLL
Trigger: GAGCAATTGAAGACCCAGCCAGGATCTTAGGCATAC...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGGCCCTGGCAGGAGTGTaGCACGCCAGTGTCTGTTTA +
Preference number: 2 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMALAGV*HASVCL
Trigger: TAAACAGACACTGGCGTGCCACACTCCTGCCAGGGC...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376020.8
3UTR-3UTR CCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGACAATGAGACTGCCCTaGCAGGAGTGTGGCACGCCA +
Preference number: 2 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMTMRLP*QECGTP
Trigger: TGGCGTGCCACACTCCTGCCAGGGCAGTCTCATTGT...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376020.8
3UTR-3UTR TCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAAGCTAACAAAGAAGATTaGAAGCACTTCCCACATGGC +
Preference number: 2 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQANKED*KHFPHG
Trigger: GCCATGTGGGAAGTGCTTTCAATCTTCTTTGTTAGC...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR TCA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGGCTAACAAAGAAGATTaGAAGCACTTCCCACATGGC +
Preference number: 2 (lower is better)
Translates to: RTGERDCISSNTGSVAAPANKED*KHFPHG
Trigger: GCCATGTGGGAAGTGCTTTCAATCTTCTTTGTTAGC...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR GCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTAGAACAAACTGCTAATTaGTATCTACTTGCTGAGAAA +
Preference number: 2 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLEQTAN*YLLAEK
Trigger: TTTCTCAGCAAGTAGATAGCAATTAGCAGTTTGTTC...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR GCA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCTTCCTTGGTTCTCTGTaGAGCAAGTACTTGCCCTTG +
Preference number: 2 (lower is better)
Translates to: LVRNRELSWITGQHLAITFLGSL*SKYLPL
Trigger: CAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAA...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR GCA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTCCTCCATCTGGGGCTTaGTACTGGCAGAGCAGCACT +
Preference number: 2 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSPPSGA*YWQSST
Trigger: AGTGCTGCTCTGCCAGTAGCAAGCCCCAGATGGAGG...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGAAAGCACTTCCCACATaGCTGGGCAGGGATGCTGTG +
Preference number: 2 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMKALPT*LGRDAV
Trigger: CACAGCATCCCTGCCCAGCCATGTGGGAAGTGCTTT...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
3UTR-3UTR CCA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCCCAGGGTCTCCTAGCTaGTTAGGACCACTGCTAGGG +
Preference number: 2 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSPGSPS*LGPLLG
Trigger: CCCTAGCAGTGGTCCTAACCAGCTAGGAGACCCTGG...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
3UTR-3UTR CCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAAATGAAGGCACTTCCTTaGTTCTCTGTGCAGCAAGTA +
Preference number: 2 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQMKALP*FSVQQV
Trigger: TACTTGCTGCACAGAGAACCAAGGAAGTGCCTTCAT...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR TCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATGCTAACAAAGAAGATTaGAAGCACTTCCCACATGGC +
Preference number: 2 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYANKED*KHFPHG
Trigger: GCCATGTGGGAAGTGCTTTCAATCTTCTTTGTTAGC...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR TCA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCTTGCTATCTACTTGCTaGGAAACTGCTAACAAAGAA +
Preference number: 2 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLALLSTC*ETANKE
Trigger: TTCTTTGTTAGCAGTTTCTCAGCAAGTAGATAGCAA...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR TCA 90 bp ATGAAACATATCAGCCTCATCCTCCCAATACAGGACATCTCAATTTGCTCATTGGAAACTGGTGCCAGGTaGATGCCCTCAAGGCAGCCA +
Preference number: 2 (lower is better)
Translates to: MKHISLILPIQDISICSLETGAR*MPSRQP
Trigger: TGGCTGCCTTGAGGGCATTCACCTGGCACCAGTTTC...CAATGAGCAAATTGAGATGTCCTGTATTGGGAGGATGAGGCTGATATGTTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR TCA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTTTGCCATCGTCCACCTaGGGGCTGCTTTTCCAGCAT +
Preference number: 2 (lower is better)
Translates to: RLDSRTRLCILLRSIPEILPSST*GLLFQH
Trigger: ATGCTGGAAAAGCAGCCCTCAGGTGGACGATGGCAA...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTAAAGCACTTCCCACATaGCTGGGCAGGGATGCTGTG +
Preference number: 2 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSKALPT*LGRDAV
Trigger: CACAGCATCCCTGCCCAGCCATGTGGGAAGTGCTTT...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCCAAACTGCTACTCACTaGCAGGCCTTGGAGGAGGGC +
Preference number: 2 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGQTATH*QALEEG
Trigger: GCCCTCCTCCAAGGCCTGCCAGTGAGTAGCAGTTTG...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR TCA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGTTGCCATCGTCCACCTaGGGGCTGCTTTTCCAGCAT +
Preference number: 2 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKLPSST*GLLFQH
Trigger: ATGCTGGAAAAGCAGCCCTCAGGTGGACGATGGCAA...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR GCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCCAACGCCTTGGCACTTaGTTACCTAGCCACGGTGGA +
Preference number: 2 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGQRLGT*LPSHGG
Trigger: TCCACCGTGGCTAGGTAAGCAAGTGCCAAGGCGTTG...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR GCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCTACCCCAGGACACCCTaGTGGCCAAGATTCTCCCAT +
Preference number: 2 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGYPRTP*WPRFSH
Trigger: ATGGGAGAATCTTGGCCAGCAGGGTGTCCTGGGGTA...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR GCA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGCAGGACATCTCAATTTaGTCATTGTTTGTCCTAGAG +
Preference number: 2 (lower is better)
Translates to: RTGERDCISSNTGSVAAPQDISI*SLFVLE
Trigger: CTCTAGGACAAACAATGAGCAAATTGAGATGTCCTG...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR GCA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTGGATCTCCCTTGGCCTaGCTTCCAAACTGCTACTCA +
Preference number: 2 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSGSPLA*LPNCYS
Trigger: TGAGTAGCAGTTTGGAAGGCAGGCCAAGGGAGATCC...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR GCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCGATGTGGCTCTGGTGTaGCTGGGCAGCTTTATGGCA +
Preference number: 2 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGDVALV*LGSFMA
Trigger: TGCCATAAAGCTGCCCAGGCACACCAGAGCCACATC...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTGCAAGTACTTGCCCTTaGCAACTGTGGGAAGGAGAG +
Preference number: 2 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSASTCP*QLWEGE
Trigger: CTCTCCTTCCCACAGTTGCCAAGGGCAAGTACTTGC...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCTTCCTAAGGGGCACCTaGGGGTACTCAACCTTTGCT +
Preference number: 2 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSFLRGT*GYSTFA
Trigger: AGCAAAGGTTGAGTACCCCCAGGTGCCCCTTAGGAA...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
3UTR-3UTR CCA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGACTGATAACTGTCTTTaGGGATCTCCCTTGGCCTGC +
Preference number: 2 (lower is better)
Translates to: IRLDSRTRLCILLRSIPETDNCL*GSPLAC
Trigger: GCAGGCCAAGGGAGATCCCCAAAGACAGTTATCAGT...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR TCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTTGCTATCTACTTGCTaGGAAACTGCTAACAAAGAA +
Preference number: 2 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLLLSTC*ETANKE
Trigger: TTCTTTGTTAGCAGTTTCTCAGCAAGTAGATAGCAA...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR GCA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTTTCCTTGGTTCTCTGTaGAGCAAGTACTTGCCCTTG +
Preference number: 2 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPFLGSL*SKYLPL
Trigger: CAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAA...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
3UTR-3UTR GCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCGTGGTCTCAGCTCACTaGAATCTCTGCCTTCCAGGT +
Preference number: 2 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGVVSAH*NLCLPG
Trigger: ACCTGGAAGGCAGAGATTGCAGTGAGCTGAGACCAC...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376020.8
3UTR-3UTR GCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCATCAGCCATCATGCTTaGCTATTACCCATGGGGGCC +
Preference number: 2 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGISHHA*LLPMGA
Trigger: GGCCCCCATGGGTAATAGGCAAGCATGATGGCTGAT...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGTTGCTGCAGCTCCCTTaGGTAGAAGCTTGTGGCTTC +
Preference number: 2 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKLLQLP*VEACGF
Trigger: GAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAA...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCGCAAGTACTTGCCCTTaGCAACTGTGGGAAGGAGAG +
Preference number: 2 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGASTCP*QLWEGE
Trigger: CTCTCCTTCCCACAGTTGCCAAGGGCAAGTACTTGC...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGAACAGGGAGCTAAGCTaGATAACAGGGCAGCATTTG +
Preference number: 2 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMNRELS*ITGQHL
Trigger: CAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTT...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376020.8
3UTR-3UTR GCA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGGAACAAACTGCTAATTaGTATCTACTTGCTGAGAAA +
Preference number: 2 (lower is better)
Translates to: RTGERDCISSNTGSVAAPEQTAN*YLLAEK
Trigger: TTTCTCAGCAAGTAGATAGCAATTAGCAGTTTGTTC...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR GCA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTTTCCTTGGTTCTCTGTaGAGCAAGTACTTGCCCTTG +
Preference number: 2 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSFLGSL*SKYLPL
Trigger: CAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAA...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR GCA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTCTCTATCAGCCATCATaGTTGCCTATTACCCATGGG +
Preference number: 2 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSLYQPS*LPITHG
Trigger: CCCATGGGTAATAGGCAAGCATGATGGCTGATAGAG...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTTTGGGTAGAAGCTTGTaGCTTCCCCAGGGTCTCCTA +
Preference number: 2 (lower is better)
Translates to: LGDGREMTEPFSISGDFFLGRSL*LPQGLL
Trigger: TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAA...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGAGGCTGTTGATGATATaGGTGGGTGATGAGTACTTG +
Preference number: 2 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMRLLMI*VGDEYL
Trigger: CAAGTACTCATCACCCACCCATATCATCAACAGCCT...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
3UTR-3UTR CCA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTATAGAAACTAGCTACTaGTGTCAGGGCCTTGGCAAC +
Preference number: 2 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSIETSY*CQGLGN
Trigger: GTTGCCAAGGCCCTGACACCAGTAGCTAGTTTCTAT...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTAACAGGGAGCTAAGCTaGATAACAGGGCAGCATTTG +
Preference number: 2 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSNRELS*ITGQHL
Trigger: CAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTT...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR CAA 90 bp CTTATTCTGTCAGATTCTACTTGGGCATTTACAGCTATATCCTGGTaGAGTCTCCAGCTGTGGGACTCAGGAAGATTCAATTATCCAGAG +
Preference number: 2 (lower is better)
Translates to: LILSDSTWAFTAISW*SLQLWDSGRFNYPE
Trigger: CTCTGGATAATTGAATCTTCCTGAGTCCCACAGCTGGAGACTCAACCAGGATATAGCTGTAAATGCCCAAGTAGAATCTGACAGAATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR GCA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGACAGGGGAGAGAGACTaGATCTCAAGTAATACTGGC +
Preference number: 2 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKTGERD*ISSNTG
Trigger: GCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGT...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR CAA 90 bp GATGAAACATATCAGCCTCATCCTCCCAATACAGGACATCTCAATTaGCTCATTGTTTGTCCTAGAGCCTGCTCAGAAGAAAAGATGACA +
Preference number: 2 (lower is better)
Translates to: DETYQPHPPNTGHLN*LIVCPRACSEEKMT
Trigger: TGTCATCTTTTCTTCTGAGCAGGCTCTAGGACAAACAATGAGCAAATTGAGATGTCCTGTATTGGGAGGATGAGGCTGATATGTTTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR TCA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGTGGGTGATGAGTACTTaGTGTCTTTGGTGTCCTAGT +
Preference number: 2 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKWVMST*CLWCPS
Trigger: ACTAGGACACCAAAGACATCAAGTACTCATCACCCA...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR GCA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCCTGATCTGCAGAAAATaGTTTCCTTCTGGGCTAACT +
Preference number: 2 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSLICRK*FPSGLT
Trigger: AGTTAGCCCAGAAGGAAAGCATTTTCTGCAGATCAG...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
3UTR-3UTR CCA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGATGAAGGCACTTCCTTaGTTCTCTGTGCAGCAAGTA +
Preference number: 2 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKMKALP*FSVQQV
Trigger: TACTTGCTGCACAGAGAACCAAGGAAGTGCCTTCAT...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCATGAAGGCACTTCCTTaGTTCTCTGTGCAGCAAGTA +
Preference number: 2 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGMKALP*FSVQQV
Trigger: TACTTGCTGCACAGAGAACCAAGGAAGTGCCTTCAT...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCAGGCTGTTGATGATATaGGTGGGTGATGAGTACTTG +
Preference number: 2 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGRLLMI*VGDEYL
Trigger: CAAGTACTCATCACCCACCCATATCATCAACAGCCT...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCTTTACAGCTATATCCTaGTTGAGTCTCCAGCTGTGG +
Preference number: 2 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGFTAIS*LSLQLW
Trigger: CCACAGCTGGAGACTCAACCAGGATATAGCTGTAAA...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGTTTACAGCTATATCCTaGTTGAGTCTCCAGCTGTGG +
Preference number: 2 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKFTAIS*LSLQLW
Trigger: CCACAGCTGGAGACTCAACCAGGATATAGCTGTAAA...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGACTGGGGATGATGAATaGTATAGCATCAATACCATC +
Preference number: 2 (lower is better)
Translates to: IRLDSRTRLCILLRSIPETGDDE*YSINTI
Trigger: GATGGTATTGATGCTATACCATTCATCATCCCCAGT...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR TCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTTTTATTGAAATATaGCCCTTGATGACAATCTGG +
Preference number: 2 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMPFIEI*PLMTIW
Trigger: CCAGATTGTCATCAAGGGTCATATTTCAATAAAAGG...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376020.8
3UTR-3UTR TCA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGCTTAGCACCTTTTATTaGAATATGACCCTTGATGAC +
Preference number: 2 (lower is better)
Translates to: IRLDSRTRLCILLRSIPELSTFY*NMTLDD
Trigger: GTCATCAAGGGTCATATTTCAATAAAAGGTGCTAAG...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR GCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCCTGATCTGCAGAAAATaGTTTCCTTCTGGGCTAACT +
Preference number: 2 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGLICRK*FPSGLT
Trigger: AGTTAGCCCAGAAGGAAAGCATTTTCTGCAGATCAG...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR GCA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTATATTCCCAAAAAGGTaGTCTAGCCCACAAATTCTG +
Preference number: 2 (lower is better)
Translates to: RLDSRTRLCILLRSIPEIIFPKR*SSPQIL
Trigger: CAGAATTTGTGGGCTAGAGCACCTTTTTGGGAATAT...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTAGGCTGTTGATGATATaGGTGGGTGATGAGTACTTG +
Preference number: 2 (lower is better)
Translates to: LGDGREMTEPFSISGDFFRLLMI*VGDEYL
Trigger: CAAGTACTCATCACCCACCCATATCATCAACAGCCT...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp ATGAAACATATCAGCCTCATCCTCCCAATACAGGACATCTCAATTTGCTCATTGAAAATGCTTTCCTTCTaGGCTAACTTTTCCCTCTCC +
Preference number: 2 (lower is better)
Translates to: MKHISLILPIQDISICSLKMLSF*ANFSLS
Trigger: GGAGAGGGAAAAGTTAGCCCAGAAGGAAAGCATTTT...CAATGAGCAAATTGAGATGTCCTGTATTGGGAGGATGAGGCTGATATGTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTAAACTTAAACCCTGCTaGGGAATGCTAAACTCAAGT +
Preference number: 2 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSKLKPC*GMLNSS
Trigger: ACTTGAGTTTAGCATTCCCCAGCAGGGTTTAAGTTT...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CCA 90 bp TCAACAAGTCAGTACTTCCCATGCTGTAATATGTTCATGAATCTCCTGGAAATCAAGGGTTTAGGGATGTaGGTAAGGGTCTGGTCATAT +
Preference number: 2 (lower is better)
Translates to: STSQYFPCCNMFMNLLEIKGLGM*VRVWSY
Trigger: ATATGACCAGACCCTTACCCACATCCCTAAACCCTT...GATTTCCAGGAGATTCATGAACATATTACAGCATGGGAAGTACTGACTTGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376020.8
3UTR-3UTR CCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGGTCAGAGTTGCTTCCTaGAATACATTTGAGTCTAAT +
Preference number: 2 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMVRVAS*NTFESN
Trigger: ATTAGACTCAAATGTATTCCAGGAAGCAACTCTGAC...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376020.8
3UTR-3UTR TCA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTTACTCAGGATGGTCTTaGAATAGATGTCTAAAAGCT +
Preference number: 2 (lower is better)
Translates to: RLDSRTRLCILLRSIPEIYSGWS*NRCLKA
Trigger: AGCTTTTAGACATCTATTTCAAGACCATCCTGAGTA...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR GCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCGAAAAACTTAAACCCTaGTGGGGAATGCTAAACTCA +
Preference number: 2 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGEKLKP*WGMLNS
Trigger: TGAGTTTAGCATTCCCCAGCAGGGTTTAAGTTTTTC...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR GCA 90 bp TCAACAAGTCAGTACTTCCCATGCTGTAATATGTTCATGAATCTCCTGGAAATCGTTTGTCCTAGAGCCTaGTCAGAAGAAAAGATGACA +
Preference number: 2 (lower is better)
Translates to: STSQYFPCCNMFMNLLEIVCPRA*SEEKMT
Trigger: TGTCATCTTTTCTTCTGAGCAGGCTCTAGGACAAAC...GATTTCCAGGAGATTCATGAACATATTACAGCATGGGAAGTACTGACTTGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376020.8
3UTR-3UTR CCA 90 bp TCAACAAGTCAGTACTTCCCATGCTGTAATATGTTCATGAATCTCCTGGAAATCATCTGTGAAGGACTATaGATAGGTGACCAAATTCCT +
Preference number: 2 (lower is better)
Translates to: STSQYFPCCNMFMNLLEIICEGL*IGDQIP
Trigger: AGGAATTTGGTCACCTATCCATAGTCCTTCACAGAT...GATTTCCAGGAGATTCATGAACATATTACAGCATGGGAAGTACTGACTTGTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376020.8
3UTR-3UTR GCA 90 bp ATGAAACATATCAGCCTCATCCTCCCAATACAGGACATCTCAATTTGCTCATTGGAACAAACTGCTAATTaGTATCTACTTGCTGAGAAA +
Preference number: 2 (lower is better)
Translates to: MKHISLILPIQDISICSLEQTAN*YLLAEK
Trigger: TTTCTCAGCAAGTAGATAGCAATTAGCAGTTTGTTC...CAATGAGCAAATTGAGATGTCCTGTATTGGGAGGATGAGGCTGATATGTTTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR CCA 72 bp AAATGGGCCCAGCTTCCTCCATCTGGGGCTTGCTACTaGCAGAGCAGCACTGTCAGGGAGGGTCGGGTTCAG +
Preference number: 3 (lower is better)
Translates to: KWAQLPPSGACY*QSSTVREGRVQ
Trigger: CTGAACCCGACCCTCCCTGACAGTGCTGCTCTGCCAGTAGCAAGCCCCAGATGGAGGAAGCTGGGCCCATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CAA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCACCCTTGGGTAGAAGCTaGTGGCTTCCCCAGGGTCTC +
Preference number: 3 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPPLGRS*WLPQGL
Trigger: GAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGG...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
3UTR TCA 72 bp CTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTaGAACTGGTGCCAGGTGAATGCCCTCAAGGCAGCC +
Preference number: 3 (lower is better)
Translates to: LCAFPCKAWVRP*NWCQVNALKAA
Trigger: GGCTGCCTTGAGGGCATTCACCTGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
3UTR CCA 72 bp TGGAAGTGGCCAGAAATGGGCCCAGCTTCCTCCATCTaGGGCTTGCTACTGGCAGAGCAGCACTGTCAGGGA +
Preference number: 3 (lower is better)
Translates to: WKWPEMGPASSI*GLLLAEQHCQG
Trigger: TCCCTGACAGTGCTGCTCTGCCAGTAGCAAGCCCCAGATGGAGGAAGCTGGGCCCATTTCTGGCCACTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CAA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCACTTGCTGCAGCTCCCTaGGGTAGAAGCTTGTGGCTT +
Preference number: 3 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPLAAAP*GRSLWL
Trigger: AAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAG...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
3UTR GCA 72 bp AGCTTGGGTGAGGCCCTGAAACTGGTGCCAGGTGAATaGCCTCAAGGCAGCCAGCTCTCTGTGAGAAATGGC +
Preference number: 3 (lower is better)
Translates to: SLGEALKLVPGE*PQGSQLSVRNG
Trigger: GCCATTTCTCACAGAGAGCTGGCTGCCTTGAGGGCATTCACCTGGCACCAGTTTCAGGGCCTCACCCAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
3UTR CCA 72 bp CTGGCTGGGTCTTCAATTGCTCTGGGGAGCTGGCTCTaGCTGGAGCTCCCAGCTACCTTGAGTTTTGGTTCC +
Preference number: 3 (lower is better)
Translates to: LAGSSIALGSWL*LELPATLSFGS
Trigger: GGAACCAAAACTCAAGGTAGCTGGGAGCTCCAGCCAGAGCCAGCTCCCCAGAGCAATTGAAGACCCAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR CCA 72 bp GTATGCCTAAGATCCTGGCTGGGTCTTCAATTGCTCTaGGGAGCTGGCTCTGGCTGGAGCTCCCAGCTACCT +
Preference number: 3 (lower is better)
Translates to: VCLRSWLGLQLL*GAGSGWSSQLP
Trigger: AGGTAGCTGGGAGCTCCAGCCAGAGCCAGCTCCCCAGAGCAATTGAAGACCCAGCCAGGATCTTAGGCATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR CCA 72 bp GGCATAGACGACTCCTCTGGCAAAGCTCCAAATGGGTaGAAGTGGCCAGAAATGGGCCCAGCTTCCTCCATC +
Preference number: 3 (lower is better)
Translates to: GIDDSSGKAPNG*KWPEMGPASSI
Trigger: GATGGAGGAAGCTGGGCCCATTTCTGGCCACTTCCACCCATTTGGAGCTTTGCCAGAGGAGTCGTCTATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR TCA 72 bp AGGGAAGCACAAGGCCAGGCCACAGTAGGGAGGCTCTaGGTTCAAGGGGAAAACTCCTTCCTAGACATCGGT +
Preference number: 3 (lower is better)
Translates to: REAQGQATVGRL*VQGENSFLDIG
Trigger: ACCGATGTCTAGGAAGGAGTTTTCCCCTTGAACTCAGAGCCTCCCTACTGTGGCCTGGCCTTGTGCTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR CCA 72 bp AAGATCCTGGCTGGGTCTTCAATTGCTCTGGGGAGCTaGCTCTGGCTGGAGCTCCCAGCTACCTTGAGTTTT +
Preference number: 3 (lower is better)
Translates to: KILAGSSIALGS*LWLELPATLSF
Trigger: AAAACTCAAGGTAGCTGGGAGCTCCAGCCAGAGCCAGCTCCCCAGAGCAATTGAAGACCCAGCCAGGATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR CCA 72 bp GCCTCCATTGAAAGCACTCCCCTACCTTCTCAATCTTaGCTGGCTTGTGTAAGCCTAGCCCCTGCAAGCCAC +
Preference number: 3 (lower is better)
Translates to: ASIESTPLPSQS*LACVSLAPASH
Trigger: GTGGCTTGCAGGGGCTAGGCTTACACAAGCCAGCCAAGATTGAGAAGGTAGGGGAGTGCTTTCAATGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CAA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACCCCTTGGGTAGAAGCTaGTGGCTTCCCCAGGGTCTC +
Preference number: 3 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDPLGRS*WLPQGL
Trigger: GAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGG...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CAA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTACTGTGCAGCAAGTACTaGCCCTTGGCAACTGTGGGA +
Preference number: 3 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVLCSKY*PLATVG
Trigger: TCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAG...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CAA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCTTTCCCCTGCAAAGCTaGGGTGAGGCCCTGAAACTG +
Preference number: 3 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVFPLQS*GEALKL
Trigger: CAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAA...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR CCA 72 bp TATTGGCATAGACGACTCCTCTGGCAAAGCTCCAAATaGGTGGAAGTGGCCAGAAATGGGCCCAGCTTCCTC +
Preference number: 3 (lower is better)
Translates to: YWHRRLLWQSSK*VEVARNGPSFL
Trigger: GAGGAAGCTGGGCCCATTTCTGGCCACTTCCACCCATTTGGAGCTTTGCCAGAGGAGTCGTCTATGCCAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CAA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAACTTGCTGCAGCTCCCTaGGGTAGAAGCTTGTGGCTT +
Preference number: 3 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQLAAAP*GRSLWL
Trigger: AAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAG...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CAA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCGAGCTCCCAGCTACCTaGAGTTTTGGTTCCCTTGAG +
Preference number: 3 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVELPAT*SFGSLE
Trigger: CTCAAGGGAACCAAAACTCAAGGTAGCTGGGAGCTC...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR GCA 72 bp GTAGCTATGGTGGGAACAATTCAACGCCTTGGCACTTaGTTACCTAGCCACGGTGGATTCAGGCTGATCTGC +
Preference number: 3 (lower is better)
Translates to: VAMVGTIQRLGT*LPSHGGFRLIC
Trigger: GCAGATCAGCCTGAATCCACCGTGGCTAGGTAAGCAAGTGCCAAGGCGTTGAATTGTTCCCACCATAGCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR CCA 72 bp ACCGTCACACACAATGAGACTGCCCTGGCAGGAGTGTaGCACGCCAGTGTCTGTTTAGCAGTTCACCTTTAT +
Preference number: 3 (lower is better)
Translates to: TVTHNETALAGV*HASVCLAVHLY
Trigger: ATAAAGGTGAACTGCTAAACAGACACTGGCGTGCCACACTCCTGCCAGGGCAGTCTCATTGTGTGTGACGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CAA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCAATGAAGGCACTTCCTaGGTTCTCTGTGCAGCAAGT +
Preference number: 3 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVNEGTS*VLCAAS
Trigger: ACTTGCTGCACAGAGAACCAAGGAAGTGCCTTCATT...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CAA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCACTGGTGTCAGGGCCTaGGCAACAGCAGCAGTTTTA +
Preference number: 3 (lower is better)
Translates to: LVRNRELSWITGQHLAITTGVRA*ATAAVL
Trigger: TAAAACTGCTGCTGTTGCCAAGGCCCTGACACCAGT...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CAA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGTCCTCCATCTGGGGCTaGCTACTGGCAGAGCAGCAC +
Preference number: 3 (lower is better)
Translates to: IRLDSRTRLCILLRSIPESSIWG*LLAEQH
Trigger: GTGCTGCTCTGCCAGTAGCAAGCCCCAGATGGAGGA...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR CCA 72 bp CCTGAGGGCTGCTTTTCCAGCATAGAAACTAGCTACTaGTGTCAGGGCCTTGGCAACAGCAGCAGTTTTAGT +
Preference number: 3 (lower is better)
Translates to: PEGCFSSIETSY*CQGLGNSSSFS
Trigger: ACTAAAACTGCTGCTGTTGCCAAGGCCCTGACACCAGTAGCTAGTTTCTATGCTGGAAAAGCAGCCCTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR CCA 72 bp CGGGAGACAGCAGAAGTTAAGACTGATAACTGTCTTTaGGGATCTCCCTTGGCCTGCCTTCCAAACTGCTAC +
Preference number: 3 (lower is better)
Translates to: RETAEVKTDNCL*GSPLACLPNCY
Trigger: GTAGCAGTTTGGAAGGCAGGCCAAGGGAGATCCCCAAAGACAGTTATCAGTCTTAACTTCTGCTGTCTCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CAA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTCCCTTGGGTAGAAGCTaGTGGCTTCCCCAGGGTCTC +
Preference number: 3 (lower is better)
Translates to: RLDSRTRLCILLRSIPEIPLGRS*WLPQGL
Trigger: GAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGG...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR CCA 72 bp GGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTaGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAAC +
Preference number: 3 (lower is better)
Translates to: GVLVQSRMKALP*FSVQQVLALGN
Trigger: GTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CAA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCAATGAAGGCACTTCCTaGGTTCTCTGTGCAGCAAGT +
Preference number: 3 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPNEGTS*VLCAAS
Trigger: ACTTGCTGCACAGAGAACCAAGGAAGTGCCTTCATT...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CAA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGTTTCCCCTGCAAAGCTaGGGTGAGGCCCTGAAACTG +
Preference number: 3 (lower is better)
Translates to: IRLDSRTRLCILLRSIPEFPLQS*GEALKL
Trigger: CAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAA...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CAA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTCTTCCCCTGAACTaGCTGCTGGGAAAGGTAAGG +
Preference number: 3 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMPLPLN*LLGKVR
Trigger: CCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGG...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
3UTR-3UTR CAA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTTGGCTGGGTCTTCAATaGCTCTGGGGAGCTGGCTCT +
Preference number: 3 (lower is better)
Translates to: RLDSRTRLCILLRSIPEIWLGLQ*LWGAGS
Trigger: AGAGCCAGCTCCCCAGAGCAATTGAAGACCCAGCCA...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CAA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTTGGCTGGGTCTTCAATaGCTCTGGGGAGCTGGCTCT +
Preference number: 3 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSWLGLQ*LWGAGS
Trigger: AGAGCCAGCTCCCCAGAGCAATTGAAGACCCAGCCA...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CAA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGTCCCTGCTGCTACAGTaGACCTTCAAGGACCCTGAG +
Preference number: 3 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMSLLLQ*TFKDPE
Trigger: CTCAGGGTCCTTGAAGGTCAACTGTAGCAGCAGGGA...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376020.8
3UTR TCA 72 bp CTGCTCAGAAGAAAAGATGACAACTATGGCCTCCATTaGAAGCACTCCCCTACCTTCTCAATCTTGGCTGGC +
Preference number: 3 (lower is better)
Translates to: LLRRKDDNYGLH*KHSPTFSILAG
Trigger: GCCAGCCAAGATTGAGAAGGTAGGGGAGTGCTTTCAATGGAGGCCATAGTTGTCATCTTTTCTTCTGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CAA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTAGCAAGTACTTGCCCTaGGCAACTGTGGGAAGGAGA +
Preference number: 3 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPSKYLP*ATVGRR
Trigger: TCTCCTTCCCACAGTTGCCAAGGGCAAGTACTTGCT...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
3UTR-3UTR CAA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTCTGTGCAGCAAGTACTaGCCCTTGGCAACTGTGGGA +
Preference number: 3 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSLCSKY*PLATVG
Trigger: TCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAG...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CAA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGGAGCTCCCAGCTACCTaGAGTTTTGGTTCCCTTGAG +
Preference number: 3 (lower is better)
Translates to: IRLDSRTRLCILLRSIPEELPAT*SFGSLE
Trigger: CTCAAGGGAACCAAAACTCAAGGTAGCTGGGAGCTC...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CAA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTTCCCTGCTGCTACAGTaGACCTTCAAGGACCCTGAG +
Preference number: 3 (lower is better)
Translates to: RLDSRTRLCILLRSIPEISLLLQ*TFKDPE
Trigger: CTCAGGGTCCTTGAAGGTCAACTGTAGCAGCAGGGA...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CAA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTTCAATCTTGGCTGGCTaGTGTAAGCCTAGCCCCTGC +
Preference number: 3 (lower is better)
Translates to: RLDSRTRLCILLRSIPEISILAG*CKPSPC
Trigger: GCAGGGGCTAGGCTTACACAAGCCAGCCAAGATTGA...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CAA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCCTTTGGGGATCTCCCTaGGCCTGCCTTCCAAACTGC +
Preference number: 3 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGLWGSP*ACLPNC
Trigger: GCAGTTTGGAAGGCAGGCCAAGGGAGATCCCCAAAG...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CAA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACATCTCAATTTGCTCATaGTTTGTCCTAGAGCCTGCT +
Preference number: 3 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDISICS*FVLEPA
Trigger: AGCAGGCTCTAGGACAAACAATGAGCAAATTGAGAT...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR CCA 72 bp CTGTCAGATTCTACTTGGGCATTTACAGCTATATCCTaGTTGAGTCTCCAGCTGTGGGACTCAGGAAGATTC +
Preference number: 3 (lower is better)
Translates to: LSDSTWAFTAIS*LSLQLWDSGRF
Trigger: GAATCTTCCTGAGTCCCACAGCTGGAGACTCAACCAGGATATAGCTGTAAATGCCCAAGTAGAATCTGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CAA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGACAGCTATATCCTGGTaGAGTCTCCAGCTGTGGGAC +
Preference number: 3 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKTAISW*SLQLWD
Trigger: GTCCCACAGCTGGAGACTCAACCAGGATATAGCTGT...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR TCA 72 bp AGAGTTGCTTCCTGGAATACATTTGAGTCTAATCTTTaGGGTTGCCTTGGAGAGCAGATCACCAAGGCCCTT +
Preference number: 3 (lower is better)
Translates to: RVASWNTFESNL*GCLGEQITKAL
Trigger: AAGGGCCTTGGTGATCTGCTCTCCAAGGCAACCTCAAAGATTAGACTCAAATGTATTCCAGGAAGCAACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR CCA 72 bp CTGTTGCAGAAATATTATTGGCATAGACGACTCCTCTaGCAAAGCTCCAAATGGGTGGAAGTGGCCAGAAAT +
Preference number: 3 (lower is better)
Translates to: LLQKYYWHRRLL*QSSKWVEVARN
Trigger: ATTTCTGGCCACTTCCACCCATTTGGAGCTTTGCCAGAGGAGTCGTCTATGCCAATAATATTTCTGCAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CAA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAATGAAGGCACTTCCTaGGTTCTCTGTGCAGCAAGT +
Preference number: 3 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSNEGTS*VLCAAS
Trigger: ACTTGCTGCACAGAGAACCAAGGAAGTGCCTTCATT...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
3UTR-3UTR CAA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGCCTACCTTCTCAATCTaGGCTGGCTTGTGTAAGCCT +
Preference number: 3 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKPTFSI*AGLCKP
Trigger: AGGCTTACACAAGCCAGCCAAGATTGAGAAGGTAGG...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CAA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTAGACTGGATGTGATGTaGCCACTGAGTAACCAGAGA +
Preference number: 3 (lower is better)
Translates to: RLDSRTRLCILLRSIPEIRLDVM*PLSNQR
Trigger: TCTCTGGTTACTCAGTGGCAACATCACATCCAGTCT...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR TCA 72 bp CAGATTCTACTTGGGCATTTACAGCTATATCCTGGTTaGGTCTCCAGCTGTGGGACTCAGGAAGATTCAATT +
Preference number: 3 (lower is better)
Translates to: QILLGHLQLYPG*VSSCGTQEDSI
Trigger: AATTGAATCTTCCTGAGTCCCACAGCTGGAGACTCAACCAGGATATAGCTGTAAATGCCCAAGTAGAATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR GCA 72 bp GACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTaGTATCTACTTGCTGAGAAACTGCTAACAAAGAAG +
Preference number: 3 (lower is better)
Translates to: DIQGRGLEQTAN*YLLAEKLLTKK
Trigger: CTTCTTTGTTAGCAGTTTCTCAGCAAGTAGATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
3UTR GCA 72 bp ATCAGCCTCATCCTCCCAATACAGGACATCTCAATTTaGTCATTGTTTGTCCTAGAGCCTGCTCAGAAGAAA +
Preference number: 3 (lower is better)
Translates to: ISLILPIQDISI*SLFVLEPAQKK
Trigger: TTTCTTCTGAGCAGGCTCTAGGACAAACAATGAGCAAATTGAGATGTCCTGTATTGGGAGGATGAGGCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR GCA 72 bp GGACATCTCAATTTGCTCATTGTTTGTCCTAGAGCCTaGTCAGAAGAAAAGATGACAACTATGGCCTCCATT +
Preference number: 3 (lower is better)
Translates to: GHLNLLIVCPRA*SEEKMTTMASI
Trigger: AATGGAGGCCATAGTTGTCATCTTTTCTTCTGAGCAGGCTCTAGGACAAACAATGAGCAAATTGAGATGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR CCA 72 bp TTTGTAACAGCAGCAAAAGTTCCTTGGCAAATTCTTTaGTTGAATGAGACATCCCTGCTGCTACAGTTGACC +
Preference number: 3 (lower is better)
Translates to: FVTAAKVPWQIL*LNETSLLLQLT
Trigger: GGTCAACTGTAGCAGCAGGGATGTCTCATTCAACCAAAGAATTTGCCAAGGAACTTTTGCTGCTGTTACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CAA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGTCTGTCAGATTCTACTaGGGCATTTACAGCTATATC +
Preference number: 3 (lower is better)
Translates to: IRLDSRTRLCILLRSIPESVRFY*GIYSYI
Trigger: GATATAGCTGTAAATGCCCAAGTAGAATCTGACAGA...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CAA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGAACCTGAACCTAACCTaGAAGGAGGCTTTTTATCTT +
Preference number: 3 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMNLNLT*KEAFYL
Trigger: AAGATAAAAAGCCTCCTTCAAGGTTAGGTTCAGGTT...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376020.8
3UTR-3UTR CAA 90 bp TCAACAAGTCAGTACTTCCCATGCTGTAATATGTTCATGAATCTCCTGGAAATCTGGCAAATTCTTTGGTaGAATGAGACATCCCTGCTG +
Preference number: 3 (lower is better)
Translates to: STSQYFPCCNMFMNLLEIWQILW*NETSLL
Trigger: CAGCAGGGATGTCTCATTCAACCAAAGAATTTGCCA...GATTTCCAGGAGATTCATGAACATATTACAGCATGGGAAGTACTGACTTGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376020.8
3UTR-3UTR CAA 90 bp TCAACAAGTCAGTACTTCCCATGCTGTAATATGTTCATGAATCTCCTGGAAATCATCTCAATTTGCTCATaGTTTGTCCTAGAGCCTGCT +
Preference number: 3 (lower is better)
Translates to: STSQYFPCCNMFMNLLEIISICS*FVLEPA
Trigger: AGCAGGCTCTAGGACAAACAATGAGCAAATTGAGAT...GATTTCCAGGAGATTCATGAACATATTACAGCATGGGAAGTACTGACTTGTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376020.8
3UTR CCA 72 bp ATGCTTCAATACTGTGATAACAACAGAAATAACCAATaGCTTAAACTCTGTACCCCCTACTCAGGATGGTCT +
Preference number: 3 (lower is better)
Translates to: MLQYCDNNRNNQ*LKLCTPYSGWS
Trigger: AGACCATCCTGAGTAGGGGGTACAGAGTTTAAGCCATTGGTTATTTCTGTTGTTATCACAGTATTGAAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR-3UTR CAA 90 bp TCAACAAGTCAGTACTTCCCATGCTGTAATATGTTCATGAATCTCCTGGAAATCACAGGACATCTCAATTaGCTCATTGTTTGTCCTAGA +
Preference number: 3 (lower is better)
Translates to: STSQYFPCCNMFMNLLEITGHLN*LIVCPR
Trigger: TCTAGGACAAACAATGAGCAAATTGAGATGTCCTGT...GATTTCCAGGAGATTCATGAACATATTACAGCATGGGAAGTACTGACTTGTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376020.8
3UTR-3UTR CAA 90 bp TCAACAAGTCAGTACTTCCCATGCTGTAATATGTTCATGAATCTCCTGGAAATCCTGAGATTACACCTATaGTTGACTTTTTCTGCATTC +
Preference number: 3 (lower is better)
Translates to: STSQYFPCCNMFMNLLEILRLHL*LTFSAF
Trigger: GAATGCAGAAAAAGTCAACAATAGGTGTAATCTCAG...GATTTCCAGGAGATTCATGAACATATTACAGCATGGGAAGTACTGACTTGTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR GCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCACACCCCGCACCGCCCTaGTCCGCCTACTCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPHPAPP*SAYSPG
Trigger: GCCGGGAGAGTAGGCGGAGCAGGGCGGTGCGGGGTG...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR GCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGCCGAGGGGGCTACGTTaGCTCCGCCCCCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAEPRGLR*LRPQQL
Trigger: GAGCTGCTGGGGGCGGAGGCAACGTAGCCCCCTCGG...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGCGGCTGCGCAGTGGGTaGGGCATGGAGGCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAERLRSG*GMEARE
Trigger: CTCCCTTGCCTCCATGCCCCACCCACTGCGCAGCCG...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCACTGAGAAGGCACGGCTaGGCAGTGGGTGGGGCATGG +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPLRRHG*AVGGAW
Trigger: CCATGCCCCACCCACTGCGCAGCCGTGCCTTCTCAG...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCAAAGAGCTCCCTCCTATaGTGCCCCCAGGCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPKSSLL*CPQARV
Trigger: CACCCGGGCCTGGGGGCAGCATAGGAGGGAGCTCTT...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCAGCTGTCCCGCCTCACTaGAGGTTGTGGTGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPAVPPH*RLWWAP
Trigger: AGGGGCCCACCACAACCTCCAGTGAGGCGGGACAGC...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTAAGGCCCAAAGAGGACTaGCCAGGCCTCTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLRPKED*PGLWPG
Trigger: CCCTGGCCAGAGGCCTGGCCAGTCCTCTTTGGGCCT...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTACTGGCTCCTCTGGCCTaGGGGAAAGGGCACAGTCAG +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLLAPLA*GKGHSQ
Trigger: CTGACTGTGCCCTTTCCCTCAGGCCAGAGGAGCCAG...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGGCTGATGTGACTCTCTaGGAAGGCACGGCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAEADVTL*EGTAAQ
Trigger: CTGCGCAGCCGTGCCTTCTCAGAGAGTCACATCAGC...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGGCTGGCCACAAGCCCTaGGGCAGAGTAGAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAEAGHKP*GRVELQ
Trigger: TTGCAGCTCTACTCTGCCCCAGGGCTTGTGGCCAGC...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTATGCGCTGCTCTCCATTaGGGAGTTGGGCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLCAALH*GVGLWR
Trigger: CCTCCAGAGCCCAACTCCTCAATGGAGAGCAGCGCA...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGTGCTTTCTCAGGGTCTaGGGAGGATGGGTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAECFLRV*GGWVRC
Trigger: GCACCTGACCCATCCTCCTCAGACCCTGAGAAAGCA...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCAGCTGATGTGACTCTCTaGGAAGGCACGGCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPADVTL*EGTAAQ
Trigger: CTGCGCAGCCGTGCCTTCTCAGAGAGTCACATCAGC...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCAGGCGCCAAGCTGATGTaGCTCTCTGAGAAGGCACGG +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPGAKLM*LSEKAR
Trigger: CCGTGCCTTCTCAGAGAGTCACATCAGCTTGGCGCC...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCAATGAGTGCGGCCTACTaGCAGGGGCGTTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPMSAAY*QGRSSM
Trigger: CATGGAGGAACGCCCCTGTCAGTAGGCCGCACTCAT...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460112.3
CDS-3UTR GCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGCTCCATGTGGGGGACTaGTTTGGCTCTGGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAELHVGD*FGSGVP
Trigger: TGGGACACCAGAGCCAAAGCAGTCCCCCACATGGAG...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGGTCCCCTTCTTCACCTaGCTCTGTGCCACTAGCTGC +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAEVPFFT*LCATSC
Trigger: GCAGCTAGTGGCACAGAGGCAGGTGAAGAAGGGGAC...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGCTCTGTGCTTTCCCCTaGAAAGCTTGGGTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAELCAFP*KAWVRP
Trigger: GGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAG...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTTCTCCATCCTCGGCTaGGCTCAGGCGCCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLFSILG*AQAPPG
Trigger: GCCCGGCGGCGCCTGAGCCCAGCCGAGGATGGAGAA...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGACTGGGGGCCTTAGTTaGCCCTGGGCCTTGCATGAT +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAETGGLS*PWALHD
Trigger: ATCATGCAAGGCCCAGGGCCAACTAAGGCCCCCAGT...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGGAGCTGGGGGTCAGGTaGCCCCCATTGGTGCGCCGA +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKELGVR*PPLVRR
Trigger: TCGGCGCACCAATGGGGGCCACCTGACCCCCAGCTC...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCGAGCTGGGGGTCAGGTaGCCCCCATTGGTGCGCCGA +
Preference number: 4 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVELGVR*PPLVRR
Trigger: TCGGCGCACCAATGGGGGCCACCTGACCCCCAGCTC...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTACACTGGAGGTTGTGGTaGGCCCCTGACTGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLHWRLW*APDCFG
Trigger: GCCAAAGCAGTCAGGGGCCCACCACAACCTCCAGTG...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCAGGGGACAGAGTCCACTaGTGCCCATCCTGTACGGGT +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPGDRVH*CPSCTG
Trigger: ACCCGTACAGGATGGGCACCAGTGGACTCTGTCCCC...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCCTCTTCCGCCGGTTTTaGATCGAGCGGCCCCGGGTC +
Preference number: 4 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLALFRRF*IERPRV
Trigger: GACCCGGGGCCGCTCGATCCAAAACCGGCGGAAGAG...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTACTTTCTGGGGGCTCCTaGGTCTCTTCCACTGGCTCC +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLLSGGS*VSSTGS
Trigger: GGAGCCAGTGGAAGAGACCCAGGAGCCCCCAGAAAG...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCCGGCTGCGCAGTGGGTaGGGCATGGAGGCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVRLRSG*GMEARE
Trigger: CTCCCTTGCCTCCATGCCCCACCCACTGCGCAGCCG...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGGGCACGGCTGCGCAGTaGGTGGGGCATGGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKGTAAQ*VGHGGK
Trigger: CTTGCCTCCATGCCCCACCCACTGCGCAGCCGTGCC...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCGGCACGGCTGCGCAGTaGGTGGGGCATGGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVGTAAQ*VGHGGK
Trigger: CTTGCCTCCATGCCCCACCCACTGCGCAGCCGTGCC...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGTGTACTTCTCCCAGTTaGGAGGAGGAGGGCGAGGAG +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAECTSPS*EEEGEE
Trigger: CTCCTCGCCCTCCTCCTCCCAACTGGGAGAAGTACA...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCACTCGAGCCCTCCAGGTaGCCAAAGCTGAGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPLEPSR*PKLRGC
Trigger: ACAACCCCTCAGCTTTGGCCACCTGGAGGGCTCGAG...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTAGTCGGGTTCAGGATGTaGCTCTGGTGTGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLVGFRM*LWCAWA
Trigger: TGCCCAGGCACACCAGAGCCACATCCTGAACCCGAC...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGGTTGTGGTGGGCCCCTaGCTGCTTTGGCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: RTGERDCISSNTGSVAAPVVVGP*LLWRAL
Trigger: CAGGGCCCGCCAAAGCAGTCAGGGGCCCACCACAAC...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTAGCCCTGTGGGTCCTATaGGATGTGGAGGTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLALWVL*DVEVCQ
Trigger: TTGGCAGACCTCCACATCTCATAGGACCCACAGGGC...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTAGGAGACCATCTCCAATaGCCTCCACGGACTCCACAG +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLGDHLQ*PPRTPQ
Trigger: CTGTGGAGTCCGTGGAGGTCATTGGAGATGGTCTCC...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCATGCTGGGACACTTTGTaGACCCTGTCTCGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPCWDTL*TLSRAL
Trigger: GAGGGCTCGAGACAGGGTTCACAAAGTGTCCCAGCA...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGCAGTCGTCCAGAGAGTaGCAGCAACAGGTTGACCAC +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAEQSSRE*QQQVDH
Trigger: GTGGTCAACCTGTTGCTGTCACTCTCTGGACGACTG...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTAGAAACTGGTGCCAGGTaGATGCCCTCAAGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLETGAR*MPSRQP
Trigger: TGGCTGCCTTGAGGGCATTCACCTGGCACCAGTTTC...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCAGCTTGGGTGAGGCCCTaGAACTGGTGCCAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPAWVRP*NWCQVN
Trigger: ATTCACCTGGCACCAGTTTCAGGGCCTCACCCAAGC...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTAGTAGGCCTCTTCCCCTaGACTTGCTGCTGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLVGLFP*TCCWER
Trigger: CCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTAC...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTAGGTGGCCCCCATTGGTaGGCCGACTACCTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVGGPHW*ADYLLR
Trigger: CCTCAGGAGGTAGTCGGCGCACCAATGGGGGCCACC...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGGGTGGCCCCCATTGGTaGGCCGACTACCTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKGGPHW*ADYLLR
Trigger: CCTCAGGAGGTAGTCGGCGCACCAATGGGGGCCACC...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGTCAGATGCCCTGCGCTaGTCTCCATTGAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAESDALR*SPLRSW
Trigger: CCAACTCCTCAATGGAGAGCAGCGCAGGGCATCTGA...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGGCCTGCATCAGTAGATaGTCAGAGCCCTGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAEACISR*SEPCWL
Trigger: CAGCCAACAGGGCTCTGAGCATCTACTGATGCAGGC...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTAGGGGCACTATGGCGATaGCCTGTGGGTCCTATGAGA +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLGALWR*PVGPMR
Trigger: TCTCATAGGACCCACAGGGCATCGCCATAGTGCCCC...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGGTATCAAGGTGCACATaGTGCAGGTGGGATGCCAGC +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAEVSRCT*CRWDAS
Trigger: GCTGGCATCCCACCTGCAGCATGTGCACCTTGATAC...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCACTCCATGTGGGGGACTaGTTTGGCTCTGGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPLHVGD*FGSGVP
Trigger: TGGGACACCAGAGCCAAAGCAGTCCCCCACATGGAG...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGGTGACAAGGGACCCTTaGTTTTCTGGAGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAEVTRDP*FSGAGP
Trigger: AGGCCCAGCTCCAGAAAAGCAAGGGTCCCTTGTCAC...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTAAGCTCCCTCCTATGCTaGCCCCAGGCCCGGGTGCTT +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVSSLLC*PQARVL
Trigger: AAGCACCCGGGCCTGGGGGCAGCATAGGAGGGAGCT...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTAAAGAGCTCCCTCCTATaGTGCCCCCAGGCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVKSSLL*CPQARV
Trigger: CACCCGGGCCTGGGGGCAGCATAGGAGGGAGCTCTT...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGTGCTGTTGCTGCTTCTaGTGCTGGGCTGCACGAAAG +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAECCCCF*CWAARK
Trigger: CTTTCGTGCAGCCCAGCAGCAGAAGCAGCAACAGCA...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCACTGAGGGGTTGTGGCTaGTCTAGGACCTCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPLRGCG*SRTSSG
Trigger: TCCTGAGGAGGTCCTAGAGCAGCCACAACCCCTCAG...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTATTGGCATCTGCCAACTaGCCCGTCAGCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLLASAN*PVSCCF
Trigger: GAAGCAGCAGCTGACGGGGCAGTTGGCAGATGCCAA...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTAATGGCTGGGCAGGGATaGTGTGGCAGAGTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLMAGQG*CGRVLV
Trigger: TACCAGCACTCTGCCACAGCATCCCTGCCCAGCCAT...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGTTGCCCAGGATGGAGTaGAGTGGTGTGGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAELPRME*SGVVSA
Trigger: AGCTGAGACCACACCACTGCACTCCATCCTGGGCAA...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCAGCAATGCCGGGAGAGTaGACACCACTGCACACACAC +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPAMPGE*TPLHTH
Trigger: GTGTGTGTGCAGTGGTGTCCACTCTCCCGGCATTGC...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCTTGGCGGGCCCTGACTaGTATCCCTCCTGTGGACGG +
Preference number: 4 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLALAGPD*YPSCGR
Trigger: CCGTCCACAGGAGGGATACCAGTCAGGGCCCGCCAA...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTAGCTGTCCCGCCTCACTaGAGGTTGTGGTGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVAVPPH*RLWWAP
Trigger: AGGGGCCCACCACAACCTCCAGTGAGGCGGGACAGC...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTACCCATCCTGTACGGGTaGGAGCTCCATCCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLPILYG*ELHPFA
Trigger: AGCAAAGGGATGGAGCTCCCACCCGTACAGGATGGG...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGCAGAGGGTTGCTGGTTaGCCAATTCACTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAEQRVAG*PIHWLL
Trigger: GAGCAGCCAGTGAATTGGCCAACCAGCAACCCTCTG...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTACTCTTCCGCCGGTTTTaGATCGAGCGGCCCCGGGTC +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVLFRRF*IERPRV
Trigger: GACCCGGGGCCGCTCGATCCAAAACCGGCGGAAGAG...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCATGGAAGGGCCTTCCATaGCTGCTGCCACAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPWKGLP*LLPQVA
Trigger: AGCCACTTGTGGCAGCAGCCATGGAAGGCCCTTCCA...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGGGCACGGCTGCGCAGTaGGTGGGGCATGGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLGTAAQ*VGHGGK
Trigger: CTTGCCTCCATGCCCCACCCACTGCGCAGCCGTGCC...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTATGTACTTCTCCCAGTTaGGAGGAGGAGGGCGAGGAG +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLCTSPS*EEEGEE
Trigger: CTCCTCGCCCTCCTCCTCCCAACTGGGAGAAGTACA...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCAGAAGGAGCTGTAGGCTaGGTCACGCTGGTTAGGGTA +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPEGAVG*VTLVRV
Trigger: TACCCTAACCAGCGTGACTCAGCCTACAGCTCCTTC...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCTGCTTTGGCGGGCCCTaGCTGGTATCCCTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVCFGGP*LVSLLW
Trigger: CCACAGGAGGGATACCAGTCAGGGCCCGCCAAAGCA...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATGTTGTGGTGGGCCCCTaGCTGCTTTGGCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYVVVGP*LLWRAL
Trigger: CAGGGCCCGCCAAAGCAGTCAGGGGCCCACCACAAC...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCGTTGTGGTGGGCCCCTaGCTGCTTTGGCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LVRNRELSWITGQHLAITVVVGP*LLWRAL
Trigger: CAGGGCCCGCCAAAGCAGTCAGGGGCCCACCACAAC...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTACTGCAGAAGCCTCATTaGGTGGGTTGGAATCCACGC +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLLQKPH*VGWNPR
Trigger: GCGTGGATTCCAACCCACTCAATGAGGCTTCTGCAG...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGGTCTGCGGAATGATATaGTTGGTCCATGGGATGGCG +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAEVCGMI*LVHGMA
Trigger: CGCCATCCCATGGACCAATCATATCATTCCGCAGAC...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGCAGCTATATCCTGGTTaGGTCTCCAGCTGTGGGACT +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAEQLYPG*VSSCGT
Trigger: AGTCCCACAGCTGGAGACTCAACCAGGATATAGCTG...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTAGCTCCAGGCTCTCCATaGTGCCAATGGAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLAPGSP*CQWSCF
Trigger: AAAGCAGCTCCATTGGCAGCATGGAGAGCCTGGAGC...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTAGTTGGCCCTGGGCCTTaGATGATGCAGTCTGTAGAG +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLVGPGP*MMQSVE
Trigger: CTCTACAGACTGCATCATGCAAGGCCCAGGGCCAAC...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCACCCCTGGTATCAAGGTaGACATGCTGCAGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPPLVSR*TCCRWD
Trigger: ATCCCACCTGCAGCATGTGCACCTTGATACCAGGGG...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCAGTGACAAGGGACCCTTaGTTTTCTGGAGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPVTRDP*FSGAGP
Trigger: AGGCCCAGCTCCAGAAAAGCAAGGGTCCCTTGTCAC...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCAGGAGGATGGGTCAGGTaGTTTCCACCAGGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPGGWVR*FPPGVQ
Trigger: CTGAACACCTGGTGGAAAGCACCTGACCCATCCTCC...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAACTGAGAAGGCACGGCTaGGCAGTGGGTGGGGCATGG +
Preference number: 4 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQLRRHG*AVGGAW
Trigger: CCATGCCCCACCCACTGCGCAGCCGTGCCTTCTCAG...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGCTTCTGCTGCTGGGCTaGACGAAAGAGCCTGTACTT +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAELLLLG*TKEPVL
Trigger: AAGTACAGGCTCTTTCGTGCAGCCCAGCAGCAGAAG...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTATGTTGCTGCTTCTGCTaGTGGGCTGCACGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLCCCFC*WAARKS
Trigger: GCTCTTTCGTGCAGCCCAGCAGCAGAAGCAGCAACA...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGTCCTGTTGCTTCTGCTaGTGCTGTTGCTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAESCCFC*CCCCFC
Trigger: GCAGAAGCAGCAACAGCAGCAGCAGAAGCAACAGGA...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGTCCAAAGCCCACCAATaGCATAGTAGCAAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAESKAHQ*HSSKGA
Trigger: AGCCCCCTTGCTACTATGGCATTGGTGGGCTTTGGA...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGTGCCCCGTCAGCTGCTaGTTCTTCTCTATCAGTACC +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAECPVSC*FFSIST
Trigger: GGTACTGATAGAGAAGAAGCAGCAGCTGACGGGGCA...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGCCAGTCCTCATCTTCTaGGACAAAGCTGCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAEPVLIF*DKAALP
Trigger: AGGCAAGGCAGCTTTGTCCCAGAAGATGAGGACTGG...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTACAGAAGGGAAATGCATaGTGGTGGCTGCTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLQKGNA*WWLLQG
Trigger: GCCCTGAAGCAGCCACCACCATGCATTTCCCTTCTG...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGTCTCCATGCTGCCAATaGAGCTGCTTTTCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAESPCCQ*SCFSRC
Trigger: GCACCGAGAAAAGCAGCTCCATTGGCAGCATGGAGA...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTAATAGGTGGCTTGGCCTaGTTGCTCCAGGCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLIGGLA*LLQALH
Trigger: ATGGAGAGCCTGGAGCAACCAGGCCAAGCCACCTAT...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGTCAGGTGGCCCCCATTaGTGCGCCGACTACCTCCTG +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKSGGPH*CADYLL
Trigger: CAGGAGGTAGTCGGCGCACCAATGGGGGCCACCTGA...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCGAGCTGGGGGTCAGGTaGCCCCCATTGGTGCGCCGA +
Preference number: 4 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPELGVR*PPLVRR
Trigger: TCGGCGCACCAATGGGGGCCACCTGACCCCCAGCTC...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTATTGGCGGGCCCTGACTaGTATCCCTCCTGTGGACGG +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVLAGPD*YPSCGR
Trigger: CCGTCCACAGGAGGGATACCAGTCAGGGCCCGCCAA...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCCACTGGAGGTTGTGGTaGGCCCCTGACTGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLAHWRLW*APDCFG
Trigger: GCCAAAGCAGTCAGGGGCCCACCACAACCTCCAGTG...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGTGTGGGGGACTGCTTTaGCTCTGGTGTCCCAAAACT +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAECGGLL*LWCPKT
Trigger: AGTTTTGGGACACCAGAGCCAAAGCAGTCCCCCACA...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCTCCGGCTGCACTCCTTaGGCTCGCTGTCCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLASGCTP*ARCPLL
Trigger: AAGAAGGGGACAGCGAGCCCAAGGAGTGCAGCCGGA...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTAGACTGGCCAGGCCTCTaGCCAGGGCTTATTCGTCCC +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVDWPGL*PGLIRP
Trigger: GGGACGAATAAGCCCTGGCCAGAGGCCTGGCCAGTC...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGGACTGGCCAGGCCTCTaGCCAGGGCTTATTCGTCCC +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKDWPGL*PGLIRP
Trigger: GGGACGAATAAGCCCTGGCCAGAGGCCTGGCCAGTC...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCATGTTGTCACCTGGGTTaGAAGGGCCTTCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPCCHLG*KGLPWL
Trigger: CAGCCATGGAAGGCCCTTCCAACCCAGGTGACAACA...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTAAAAGCACTTCCCACATaGCTGGGCAGGGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLKALPT*LGRDAV
Trigger: CACAGCATCCCTGCCCAGCCATGTGGGAAGTGCTTT...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCCTCCTGTGGACGGGATaGCATCTGAGAGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVLLWTG*HLRAGG
Trigger: ACCCCCAGCTCTCAGATGTCATCCCGTCCACAGGAG...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCAGCATCCTCCCCAGCTTaGGCAGTAGAAGCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPASSPA*AVEAFN
Trigger: ATTGAAGGCTTCTACTGCTCAAGCTGGGGAGGATGC...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCAGTCTGCGGAATGATATaGTTGGTCCATGGGATGGCG +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPVCGMI*LVHGMA
Trigger: CGCCATCCCATGGACCAATCATATCATTCCGCAGAC...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCGCCTTGGAGGAGGGCTaGGCCCAGGAACTGAGAACA +
Preference number: 4 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVALEEG*AQELRT
Trigger: TGTTCTCAGTTCCTGGGCTCAGCCCTCCTCCAAGGC...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGGTAGCCCAGGTTCATTaGATAAGTGGCAGAACCAGG +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAEVAQVH*ISGRTR
Trigger: CCTGGTTCTGCCACTTATTCAATGAACCTGGGCTAC...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGTGCTGCCAATGGAGCTaGTTTTCTCGGTGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAECCQWS*FSRCCN
Trigger: ATTGCAGCACCGAGAAAAGCAGCTCCATTGGCAGCA...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTAGTGGCTTGGCCTGGTTaGTCCAGGCTCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVVAWPG*SRLSML
Trigger: CAGCATGGAGAGCCTGGAGCAACCAGGCCAAGCCAC...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTATCCAAAGCCCACCAATaGCATAGTAGCAAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLSKAHQ*HSSKGA
Trigger: AGCCCCCTTGCTACTATGGCATTGGTGGGCTTTGGA...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTACAGCTCCTTGGCATCTaGCAACTGCCCCGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVQLLGI*QLPRQL
Trigger: CAGCTGACGGGGCAGTTGGCAGATGCCAAGGAGCTG...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGCTGGTGCCAGGTGAATaGCCTCAAGGCAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKLVPGE*PQGSQL
Trigger: GAGCTGGCTGCCTTGAGGGCATTCACCTGGCACCAG...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCAATCAGCCATCATGCTTaGCTATTACCCATGGGGGCC +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPISHHA*LLPMGA
Trigger: GGCCCCCATGGGTAATAGGCAAGCATGATGGCTGAT...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTATGCACAGGGACGTACTaGAAGGACCCAGGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVCTGTY*KDPGRF
Trigger: GAACCGGCCTGGGTCCTTCCAGTACGTCCCTGTGCA...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCTGCACAGGGACGTACTaGAAGGACCCAGGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVCTGTY*KDPGRF
Trigger: GAACCGGCCTGGGTCCTTCCAGTACGTCCCTGTGCA...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR CCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCAAAGGGAAATGCATGGTaGTGGCTGCTTCAGGGCATC +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPKGNAW*WLLQGI
Trigger: GATGCCCTGAAGCAGCCACCACCATGCATTTCCCTT...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTATCTCCATGCTGCCAATaGAGCTGCTTTTCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLSPCCQ*SCFSRC
Trigger: GCACCGAGAAAAGCAGCTCCATTGGCAGCATGGAGA...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAATTGGCGGGCCCTGACTaGTATCCCTCCTGTGGACGG +
Preference number: 4 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQLAGPD*YPSCGR
Trigger: CCGTCCACAGGAGGGATACCAGTCAGGGCCCGCCAA...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGCTTTTCTTCCCTTTGTaGCTGCTGTGCAAAGGGGAC +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAELFFPL*LLCKGD
Trigger: GTCCCCTTTGCACAGCAGCCACAAAGGGAAGAAAAG...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCCTCTTCCGCCGGTTTTaGATCGAGCGGCCCCGGGTC +
Preference number: 4 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPLFRRF*IERPRV
Trigger: GACCCGGGGCCGCTCGATCCAAAACCGGCGGAAGAG...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGCTTTCTGGGGGCTCCTaGGTCTCTTCCACTGGCTCC +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKLSGGS*VSSTGS
Trigger: GGAGCCAGTGGAAGAGACCCAGGAGCCCCCAGAAAG...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCAGGCCCAAAGAGGACTaGCCAGGCCTCTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LVRNRELSWITGQHLAITRPKED*PGLWPG
Trigger: CCCTGGCCAGAGGCCTGGCCAGTCCTCTTTGGGCCT...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTAGATTGGTCCATGGGATaGCGCCTCAATTCCCTACAG +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLDWSMG*RLNSLQ
Trigger: CTGTAGGGAATTGAGGCGCCATCCCATGGACCAATC...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCACGGCTGCGCAGTGGGTaGGGCATGGAGGCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAARLRSG*GMEARE
Trigger: CTCCCTTGCCTCCATGCCCCACCCACTGCGCAGCCG...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTAACTGAAATACTGGGGTaGCAGCTCCTCTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLTEILG*QLLFLL
Trigger: GAGGAGGAAGAGGAGCTGCCACCCCAGTATTTCAGT...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGCCAACTTCTCCTGGTTaGCCTCTGAATCGATGCTGT +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAEPTSPG*PLNRCC
Trigger: ACAGCATCGATTCAGAGGCCAACCAGGAGAAGTTGG...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTATTGGGTAGAAGCTTGTaGCTTCCCCAGGGTCTCCTA +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLLGRSL*LPQGLL
Trigger: TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAA...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCTCTGTGAGAAATGGCTaGCCACAAGCCCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLASVRNG*PQALGQ
Trigger: CTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGA...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCGGTCTTCAATTGCTCTaGGGAGCTGGCTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLAGLQLL*GAGSGW
Trigger: CCAGCCAGAGCCAGCTCCCCAGAGCAATTGAAGACC...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCACAATGAGACTGCCCTaGCAGGAGTGTGGCACGCCA +
Preference number: 4 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLATMRLP*QECGTP
Trigger: TGGCGTGCCACACTCCTGCCAGGGCAGTCTCATTGT...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCGTCGGGTTCAGGATGTaGCTCTGGTGTGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVVGFRM*LWCAWA
Trigger: TGCCCAGGCACACCAGAGCCACATCCTGAACCCGAC...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGCATAGACGACTCCTCTaGCAAAGCTCCAAATGGGTG +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAEHRRLL*QSSKWV
Trigger: CACCCATTTGGAGCTTTGCCAGAGGAGTCGTCTATG...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATATGAGTGCGGCCTACTaGCAGGGGCGTTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYMSAAY*QGRSSS
Trigger: GGAGGAGGAACGCCCCTGTCAGTAGGCCGCACTCAT...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR TCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAACTTGGCCACATGCCATaGGTGCGGCCTACTGACAGG +
Preference number: 4 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQLGHMP*VRPTDR
Trigger: CCTGTCAGTAGGCCGCACTCATGGCATGTGGCCAAG...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATCTGGCTCCTCTGGCCTaGGGGAAAGGGCACAGTCAG +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYLAPLA*GKGHSQ
Trigger: CTGACTGTGCCCTTTCCCTCAGGCCAGAGGAGCCAG...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACCTGGCTCCTCTGGCCTaGGGGAAAGGGCACAGTCAG +
Preference number: 4 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDLAPLA*GKGHSQ
Trigger: CTGACTGTGCCCTTTCCCTCAGGCCAGAGGAGCCAG...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATTGCTTTGGCGGGCCCTaGCTGGTATCCCTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYCFGGP*LVSLLW
Trigger: CCACAGGAGGGATACCAGTCAGGGCCCGCCAAAGCA...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTGCGCTGCTCTCCATTaGGGAGTTGGGCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: RTGERDCISSNTGSVAAPCAALH*GVGLWR
Trigger: CCTCCAGAGCCCAACTCCTCAATGGAGAGCAGCGCA...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGCGCTGCTCTCCATTaGGGAGTTGGGCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLCAALH*GVGLWR
Trigger: CCTCCAGAGCCCAACTCCTCAATGGAGAGCAGCGCA...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCAATTCAGGAGGCTGACTaGACTCACAGTTCTGATGGC +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPIQEAD*THSSDG
Trigger: GCCATCAGAACTGTGAGTTCAGTCAGCCTCCTGAAT...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGGCCCTGTGGGTCCTATaGGATGTGGAGGTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKALWVL*DVEVCQ
Trigger: TTGGCAGACCTCCACATCTCATAGGACCCACAGGGC...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCAGGTTGGTCTGCGGAATaGTATGATTGGTCCATGGGA +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPGWSAE*YDWSMG
Trigger: TCCCATGGACCAATCATATCATTCCGCAGACCAACC...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCAGGAACCAGAGGTTTCTaGACTGAAATACTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPGTRGF*TEILGW
Trigger: CCACCCCAGTATTTCAGTTCAGAAACCTCTGGTTCC...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAACCAGGTGGCCAAAGCTaGGGGGTTGTGGCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQPGGQS*GVVAAL
Trigger: TAGAGCAGCCACAACCCCTCAGCTTTGGCCACCTGG...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGATGCATGGTGGTGGCTaGTTCAGGGCATCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKMHGGG*FRASLQ
Trigger: CTGGAGGGATGCCCTGAAGCAGCCACCACCATGCAT...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGTTCTCGGTGCTGCAATaGCGGGAGAGTGGACACCAC +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKFSVLQ*RESGHH
Trigger: GTGGTGTCCACTCTCCCGGCATTGCAGCACCGAGAA...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCATGCTGCCAATGGAGCTaGTTTTCTCGGTGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPCCQWS*FSRCCN
Trigger: ATTGCAGCACCGAGAAAAGCAGCTCCATTGGCAGCA...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTAGACCACAGGCTCAGATaGCCTGCGCTGCTCTCCATT +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVDHRLR*PALLSI
Trigger: AATGGAGAGCAGCGCAGGGCATCTGAGCCTGTGGTC...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGGACAGAGTCCACTGGTaGCCATCCTGTACGGGTGGG +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLDRVHW*PSCTGG
Trigger: CCCACCCGTACAGGATGGGCACCAGTGGACTCTGTC...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAATGCCAGGTGCCAAGCTaGTGTCCTCGAGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQCQVPS*CPRGHC
Trigger: ACAGTGCCCTCGAGGACAGCAGCTTGGCACCTGGCA...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGTTGGCATCTGCCAACTaGCCCGTCAGCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKLASAN*PVSCCF
Trigger: GAAGCAGCAGCTGACGGGGCAGTTGGCAGATGCCAA...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGCTGAGACATTTGAGTTaGTCTTCCCCGAGCTTGATC +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAELRHLS*SSPSLI
Trigger: GATCAAGCTCGGGGAAGAGCAACTCAAATGTCTCAG...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCATGTGCAGCAAGTACTTaGCCTTGGCAACTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPCAAST*PWQLWE
Trigger: TTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACA...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGCTCTATCAGCCATCATaGTTGCCTATTACCCATGGG +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAELYQPS*LPITHG
Trigger: CCCATGGGTAATAGGCAAGCATGATGGCTGATAGAG...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCCCTCCATCTGGGGCTTaGTACTGGCAGAGCAGCACT +
Preference number: 4 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVPPSGA*YWQSST
Trigger: AGTGCTGCTCTGCCAGTAGCAAGCCCCAGATGGAGG...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACTTCTCCATCCTCGGCTaGGCTCAGGCGCCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHFSILG*AQAPPG
Trigger: GCCCGGCGGCGCCTGAGCCCAGCCGAGGATGGAGAA...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCAAGAATGAGGGCCTCTTaGCGGGAGCCATATAATGGA +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPRMRAS*REPYNG
Trigger: TCCATTATATGGCTCCCGCCAAGAGGCCCTCATTCT...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGATCCCTCCAGCAGCTTaGCCACATGCCATGAGTGCG +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKIPPAA*PHAMSA
Trigger: CGCACTCATGGCATGTGGCCAAGCTGCTGGAGGGAT...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCCAGAAGGGAAATGCATaGTGGTGGCTGCTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLAQKGNA*WWLLQG
Trigger: GCCCTGAAGCAGCCACCACCATGCATTTCCCTTCTG...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGGCAGTCTGTAGAGGCTaGCTCCTCTGGCCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLAVCRG*LLWPEG
Trigger: TCCCTCAGGCCAGAGGAGCCAGCCTCTACAGACTGC...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTAGGCCTTAGTTGGCCCTaGGCCTTGCATGATGCAGTC +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVGLSWP*ALHDAV
Trigger: GACTGCATCATGCAAGGCCCAGGGCCAACTAAGGCC...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATTCAGGTGGCCCCCATTaGTGCGCCGACTACCTCCTG +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYSGGPH*CADYLL
Trigger: CAGGAGGTAGTCGGCGCACCAATGGGGGCCACCTGA...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTACCTCACTGGAGGTTGTaGTGGGCCCCTGACTGCTTT +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVPHWRL*WAPDCF
Trigger: AAAGCAGTCAGGGGCCCACCACAACCTCCAGTGAGG...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCCCTCACTGGAGGTTGTaGTGGGCCCCTGACTGCTTT +
Preference number: 4 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVPHWRL*WAPDCF
Trigger: AAAGCAGTCAGGGGCCCACCACAACCTCCAGTGAGG...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTAGGGATCCAACAGCTTTaGTTGAGGCCTGCATCAGTA +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLGIQQL*LRPASV
Trigger: TACTGATGCAGGCCTCAACCAAAGCTGTTGGATCCC...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGTGTTCAGGGGCACTATaGCGATGCCCTGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKCSGAL*RCPVGP
Trigger: AGGACCCACAGGGCATCGCCATAGTGCCCCTGAACA...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGGAACACCGAATGCATTaGTGGTGGTGGCACCGGCAG +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKEHRMH*WWWHRQ
Trigger: CTGCCGGTGCCACCACCACCAATGCATTCGGTGTTC...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCAATTTCCCTCCCTGACTaGCTGGTCTTCCTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPISLPD*LVFLFP
Trigger: AGGAAACAGGAAGACCAGCCAGTCAGGGAGGGAAAT...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCTGCTGCTTCTGCTGCTaGGCTGCACGAAAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVCCFCC*AARKSL
Trigger: CAGGCTCTTTCGTGCAGCCCAGCAGCAGAAGCAGCA...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAAAGCCTCCCGAGTAGCTaGGACTACTGGTGCGTGCCA +
Preference number: 4 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQSLPSS*DYWCVP
Trigger: TGGCACGCACCAGTAGTCCCAGCTACTCGGGAGGCT...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCCAAACTGCTACTCACTaGCAGGCCTTGGAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVQTATH*QALEEG
Trigger: GCCCTCCTCCAAGGCCTGCCAGTGAGTAGCAGTTTG...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTATCTGGGGCTTGCTACTaGCAGAGCAGCACTGTCAGG +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVSGACY*QSSTVR
Trigger: CCTGACAGTGCTGCTCTGCCAGTAGCAAGCCCCAGA...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCAAAAGCTCCAAATGGGTaGAAGTGGCCAGAAATGGGC +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPKAPNG*KWPEMG
Trigger: GCCCATTTCTGGCCACTTCCACCCATTTGGAGCTTT...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTACATAGACGACTCCTCTaGCAAAGCTCCAAATGGGTG +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLHRRLL*QSSKWV
Trigger: CACCCATTTGGAGCTTTGCCAGAGGAGTCGTCTATG...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTACCAGTTAAGACCTTCTaGGGCGAGGGACCATCAGCC +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVPVKTF*GEGPSA
Trigger: GGCTGATGGTCCCTCGCCCCAGAAGGTCTTAACTGG...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460112.3
CDS-3UTR TCA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCGCGCCGACTACCTCCTaGGGTCTCAGCCACATTAGG +
Preference number: 4 (lower is better)
Translates to: LVRNRELSWITGQHLAITAPTTS*GLSHIR
Trigger: CCTAATGTGGCTGAGACCTCAGGAGGTAGTCGGCGC...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCTCCTGTGGACGGGATaGCATCTGAGAGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: LVRNRELSWITGQHLAITLLWTG*HLRAGG
Trigger: ACCCCCAGCTCTCAGATGTCATCCCGTCCACAGGAG...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAACAGTCCGTGGCTTGTTaGACAAGGGAGCCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQQSVAC*TREPEA
Trigger: TGCCTCTGGCTCCCTTGTTCAACAAGCCACGGACTG...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCATGGGCCTTCCTCCTCTaGATTTCATTACGCAGATTG +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPWAFLL*ISLRRL
Trigger: CAATCTGCGTAATGAAATTCAGAGGAGGAAGGCCCA...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCAAGGGGTGACATGGAATaGTATGATTGGTCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPRGDME*YDWSVA
Trigger: TGCCACAGACCAATCATATCATTCCATGTCACCCCT...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCGGCGCCAAGCTGATGTaGCTCTCTGAGAAGGCACGG +
Preference number: 4 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPGAKLM*LSEKAR
Trigger: CCGTGCCTTCTCAGAGAGTCACATCAGCTTGGCGCC...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGTTTGGGGCGCCAAGCTaGTGTGACTCTCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKFGAPS*CDSLRR
Trigger: CCTTCTCAGAGAGTCACATCAGCTTGGCGCCCCAAA...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGGGGCAGAATTGGCATTaGTGTCCTCTAGCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKGQNWH*CPLAAL
Trigger: GAGGGCTGCTAGAGGACATCAATGCCAATTCTGCCC...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTACAGTCGTCCAGAGAGTaGCAGCAACAGGTTGACCAC +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVQSSRE*QQQVDH
Trigger: GTGGTCAACCTGTTGCTGTCACTCTCTGGACGACTG...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTACTCCTGGTTGGCCTCTaGATCGATGCTGTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVLLVGL*IDAVQS
Trigger: GCTCTGAACAGCATCGATTCAGAGGCCAACCAGGAG...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGTGGGTGATGAGTACTTaGTGTCTTTGGTGTCCTAGT +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAEWVMST*CLWCPS
Trigger: ACTAGGACACCAAAGACATCAAGTACTCATCACCCA...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATCCTGCAAAGCTTGGGTaGGGCCCTGAAACTGGTGCC +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYPAKLG*GPETGA
Trigger: GGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGG...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCTGCAAAGCTTGGGTaGGGCCCTGAAACTGGTGCC +
Preference number: 4 (lower is better)
Translates to: LVRNRELSWITGQHLAITPAKLG*GPETGA
Trigger: GGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGG...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCTTGCCATCGTCCACCTaGGGGCTGCTTTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVLPSST*GLLFQH
Trigger: ATGCTGGAAAAGCAGCCCTCAGGTGGACGATGGCAA...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGCCCTGCTGCTACAGTTaGCCTTCAAGGACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: RTGERDCISSNTGSVAAPPCCYS*PSRTLR
Trigger: CCTCAGGGTCCTTGAAGGTCAACTGTAGCAGCAGGG...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGCACCGTCACACACAATaGGACTGCCCTGGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: RTGERDCISSNTGSVAAPHRHTQ*DCPGRS
Trigger: ACTCCTGCCAGGGCAGTCTCATTGTGTGTGACGGTG...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGAGCTCAGACTCTCGTTaGCAAACCCTCCAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: RTGERDCISSNTGSVAAPSSDSR*QTLQPA
Trigger: CGCTGGCTGGAGGGTTTGTCAACGAGAGTCTGAGCT...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460112.3
CDS-3UTR GCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCCACCCCGCACCGCCCTaGTCCGCCTACTCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGHPAPP*SAYSPG
Trigger: GCCGGGAGAGTAGGCGGAGCAGGGCGGTGCGGGGTG...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR GCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCAGCCACATGCCATGAGTaGGGCCTACTGACAGGGGCG +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAAATCHE*GLLTGA
Trigger: CGCCCCTGTCAGTAGGCCGCACTCATGGCATGTGGC...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGAGCAGCTTGGCCACATaGCATGAGTGCGGCCTACTG +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLSSLAT*HECGLL
Trigger: CAGTAGGCCGCACTCATGGCATGTGGCCAAGCTGCT...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTTCTCGGTGCTGCAATaGCGGGAGAGTGGACACCAC +
Preference number: 4 (lower is better)
Translates to: RTGERDCISSNTGSVAAPFSVLQ*RESGHH
Trigger: GTGGTGTCCACTCTCCCGGCATTGCAGCACCGAGAA...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTAGTATCAAGGTGCACATaGTGCAGGTGGGATGCCAGC +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVVSRCT*CRWDAS
Trigger: GCTGGCATCCCACCTGCAGCATGTGCACCTTGATAC...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGGCTCCATCCCTTTGCTaGCCCTGGTATCAAGGTGCA +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKAPSLC*PWYQGA
Trigger: TGCACCTTGATACCAGGGGCAGCAAAGGGATGGAGC...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAAGTCCCCTTCTTCACCTaGCTCTGTGCCACTAGCTGC +
Preference number: 4 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQVPFFT*LCATSC
Trigger: GCAGCTAGTGGCACAGAGGCAGGTGAAGAAGGGGAC...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTAGGTAGAATTAGAAATTaGTGGGCCCCAGGAGTAGAC +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLGRIRN*WAPGVD
Trigger: GTCTACTCCTGGGGCCCAGCAATTTCTAATTCTACC...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCCAACGCCTTGGCACTTaGTTACCTAGCCACGGTGGA +
Preference number: 4 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVQRLGT*LPSHGG
Trigger: TCCACCGTGGCTAGGTAAGCAAGTGCCAAGGCGTTG...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTAGCCTGCCTTCCAAACTaGTACTCACTGGCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVACLPN*YSLAGL
Trigger: AAGGCCTGCCAGTGAGTAGCAGTTTGGAAGGCAGGC...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCACTCTATCAGCCATCATaGTTGCCTATTACCCATGGG +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPLYQPS*LPITHG
Trigger: CCCATGGGTAATAGGCAAGCATGATGGCTGATAGAG...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTAGATGTGGCTCTGGTGTaGCTGGGCAGCTTTATGGCA +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVDVALV*LGSFMA
Trigger: TGCCATAAAGCTGCCCAGGCACACCAGAGCCACATC...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTAGGAAATGCATGGTGGTaGCTGCTTCAGGGCATCCCT +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVGNAWW*LLQGIP
Trigger: AGGGATGCCCTGAAGCAGCCACCACCATGCATTTCC...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCGGAAATGCATGGTGGTaGCTGCTTCAGGGCATCCCT +
Preference number: 4 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVGNAWW*LLQGIP
Trigger: AGGGATGCCCTGAAGCAGCCACCACCATGCATTTCC...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCAAGGGAAATGCATGGTaGTGGCTGCTTCAGGGCATC +
Preference number: 4 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLAKGNAW*WLLQGI
Trigger: GATGCCCTGAAGCAGCCACCACCATGCATTTCCCTT...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATGCAGTCTGTAGAGGCTaGCTCCTCTGGCCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYAVCRG*LLWPEG
Trigger: TCCCTCAGGCCAGAGGAGCCAGCCTCTACAGACTGC...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCATCTGTCACAGGCTTTTaGGGATCCAACAGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPSVTGF*GSNSFG
Trigger: ACCAAAGCTGTTGGATCCCCAAAAGCCTGTGACAGA...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCGGTTGGAATCCACGCTaGAAGCTCTGTCACAGGCTT +
Preference number: 4 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLAGWNPR*KLCHRL
Trigger: AAGCCTGTGACAGAGCTTCCAGCGTGGATTCCAACC...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGCCCATCCTGTACGGGTaGGAGCTCCATCCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: RTGERDCISSNTGSVAAPPILYG*ELHPFA
Trigger: AGCAAAGGGATGGAGCTCCCACCCGTACAGGATGGG...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACGGGGACAGAGTCCACTaGTGCCCATCCTGTACGGGT +
Preference number: 4 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDGDRVH*CPSCTG
Trigger: ACCCGTACAGGATGGGCACCAGTGGACTCTGTCCCC...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCACTTTCTTTGCTGGACTaGTCATGGGTTCCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPLSLLD*SWVPPV
Trigger: TACAGGAGGAACCCATGACCAGTCCAGCAAAGAAAG...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTAGAGGCAGAGGGTTGCTaGTTGGCCAATTCACTGGCT +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVEAEGC*LANSLA
Trigger: AGCCAGTGAATTGGCCAACCAGCAACCCTCTGCCTC...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGGAGGCAGAGGGTTGCTaGTTGGCCAATTCACTGGCT +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKEAEGC*LANSLA
Trigger: AGCCAGTGAATTGGCCAACCAGCAACCCTCTGCCTC...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCATTGAAGAACAGTCCGTaGCTTGTTGAACAAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPLKNSP*LVEQGS
Trigger: GCTCCCTTGTTCAACAAGCCACGGACTGTTCTTCAA...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTATTGAAGAACAGTCCGTaGCTTGTTGAACAAGGGAGC +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLLKNSP*LVEQGS
Trigger: GCTCCCTTGTTCAACAAGCCACGGACTGTTCTTCAA...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAAGAGTGGAGGACTTTCTaGGGGCTCCTGGGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQEWRTF*GLLGLF
Trigger: GAAGAGACCCAGGAGCCCCCAGAAAGTCCTCCACTC...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTAGTTAGAGGCAGTGAGTaGAGGACTTTCTGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVVRGSE*RTFWGL
Trigger: GAGCCCCCAGAAAGTCCTCCACTCACTGCCTCTAAC...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATTGGCTCTCAGGGGCTTaGCTGAGGCACTCGGAAGAC +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYWLSGA*LRHSED
Trigger: GTCTTCCGAGTGCCTCAGCCAAGCCCCTGAGAGCCA...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGAAGGGCCTTCCATaGCTGCTGCCACAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLWKGLP*LLPQVA
Trigger: AGCCACTTGTGGCAGCAGCCATGGAAGGCCCTTCCA...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGCTGGAGCTCATTGGCTaGAAGTTTTGGTCTATAGGT +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAELELIG*KFWSIG
Trigger: ACCTATAGACCAAAACTTCCAGCCAATGAGCTCCAG...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGCACCGAATGCATTGGTaGTGGTGGCACCGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLHRMHW*WWHRQL
Trigger: CAACTGCCGGTGCCACCACCACCAATGCATTCGGTG...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTGTACTTCTCCCAGTTaGGAGGAGGAGGGCGAGGAG +
Preference number: 4 (lower is better)
Translates to: RTGERDCISSNTGSVAAPCTSPS*EEEGEE
Trigger: CTCCTCGCCCTCCTCCTCCCAACTGGGAGAAGTACA...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGCCAGGGTCTCCTAGCTaGTTAGGACCACTGCTAGGG +
Preference number: 4 (lower is better)
Translates to: RTGERDCISSNTGSVAAPPGSPS*LGPLLG
Trigger: CCCTAGCAGTGGTCCTAACCAGCTAGGAGACCCTGG...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGAGGCTGTTGATGATATaGGTGGGTGATGAGTACTTG +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAERLLMI*VGDEYL
Trigger: CAAGTACTCATCACCCACCCATATCATCAACAGCCT...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCCAGGATGGAGTGCAGTaGTGTGGTCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVQDGVQ*CGLSSL
Trigger: CAGTGAGCTGAGACCACACCACTGCACTCCATCCTG...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR CCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAAGGTCTTCAATTGCTCTaGGGAGCTGGCTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQGLQLL*GAGSGW
Trigger: CCAGCCAGAGCCAGCTCCCCAGAGCAATTGAAGACC...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTACCCAGGACACCCTGCTaGCCAAGATTCTCCCATTGT +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVPRTPC*PRFSHC
Trigger: ACAATGGGAGAATCTTGGCCAGCAGGGTGTCCTGGG...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGTGGCTCTGGTGTGCCTaGGCAGCTTTATGGCACATG +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKWLWCA*AALWHM
Trigger: CATGTGCCATAAAGCTGCCCAGGCACACCAGAGCCA...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGAAGGGTTTAGGGATGTaGGTAAGGGTCTGGTCATAT +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAEKGLGM*VRVWSY
Trigger: ATATGACCAGACCCTTACCCACATCCCTAAACCCTT...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGTGCTATCACTGGGTTTaGGGTGGGCCTGGGATTCTG +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKCYHWV*GGPGIL
Trigger: CAGAATCCCAGGCCCACCCCAAACCCAGTGATAGCA...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR CCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATGGTGGAGAGATGGCTTaGGAGAGAGCGGGGTATCCG +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYGGEMA*ERAGYP
Trigger: CGGATACCCCGCTCTCTCCCAAGCCATCTCTCCACC...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460112.3
CDS-3UTR CCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATAGGGGCGTTCCTCCATaGAAGTTGCCCAGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYRGVPP*KLPRVE
Trigger: CTCCACCCTGGGCAACTTCCATGGAGGAACGCCCCT...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460112.3
3UTR CAA 72 bp AGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTaGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTA +
Preference number: 4 (lower is better)
Translates to: SVVLRSHLAAAP*GRSLWLPQGLL
Trigger: TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGGAAGGAGCTGTAGGCTaGGTCACGCTGGTTAGGGTA +
Preference number: 4 (lower is better)
Translates to: RTGERDCISSNTGSVAAPEGAVG*VTLVRV
Trigger: TACCCTAACCAGCGTGACTCAGCCTACAGCTCCTTC...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCGGTTGGTCTGCGGAATaGTATGATTGGTCCATGGGA +
Preference number: 4 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLAGWSAE*YDWSMG
Trigger: TCCCATGGACCAATCATATCATTCCGCAGACCAACC...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTTTGGGGCGCCAAGCTaGTGTGACTCTCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLFGAPS*CDSLRR
Trigger: CCTTCTCAGAGAGTCACATCAGCTTGGCGCCCCAAA...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAAGGGCAGAATTGGCATTaGTGTCCTCTAGCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQGQNWH*CPLAAL
Trigger: GAGGGCTGCTAGAGGACATCAATGCCAATTCTGCCC...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATGCTTGGGTGAGGCCCTaGAACTGGTGCCAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYAWVRP*NWCQVN
Trigger: ATTCACCTGGCACCAGTTTCAGGGCCTCACCCAAGC...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATGTAGGCCTCTTCCCCTaGACTTGCTGCTGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYVGLFP*TCCWER
Trigger: CCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTAC...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTTGCCATCGTCCACCTaGGGGCTGCTTTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLLPSST*GLLFQH
Trigger: ATGCTGGAAAAGCAGCCCTCAGGTGGACGATGGCAA...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGCTTGGCTGGGTTGTGTaGTACCAAGGATTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: RTGERDCISSNTGSVAAPLGWVV*YQGLAP
Trigger: TGGGGCCAATCCTTGGTATCACACAACCCAGCCAAG...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCAGCAGCTTGGCCACATaGCATGAGTGCGGCCTACTG +
Preference number: 4 (lower is better)
Translates to: LVRNRELSWITGQHLAITSSLAT*HECGLL
Trigger: CAGTAGGCCGCACTCATGGCATGTGGCCAAGCTGCT...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATATGCATGGTGGTGGCTaGTTCAGGGCATCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYMHGGG*FRASLQ
Trigger: CTGGAGGGATGCCCTGAAGCAGCCACCACCATGCAT...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTAGAGAGTGGACACCACTaGACACACACGTCACTTGTG +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVESGHH*THTSLV
Trigger: CACAAGTGACGTGTGTGTGCAGTGGTGTCCACTCTC...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGCTTTTCTCGGTGCTaGAATGCCGGGAGAGTGGAC +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLCFSRC*NAGRVD
Trigger: GTCCACTCTCCCGGCATTGCAGCACCGAGAAAAGCA...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGAGCTGCTTTTCTCGGTaGTGCAATGCCGGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLSCFSR*CNAGRV
Trigger: CACTCTCCCGGCATTGCAGCACCGAGAAAAGCAGCT...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGGCTCCAGGCTCTCCATaGTGCCAATGGAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: RTGERDCISSNTGSVAAPAPGSP*CQWSCF
Trigger: AAAGCAGCTCCATTGGCAGCATGGAGAGCCTGGAGC...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCGACCACAGGCTCAGATaGCCTGCGCTGCTCTCCATT +
Preference number: 4 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPDHRLR*PALLSI
Trigger: AATGGAGAGCAGCGCAGGGCATCTGAGCCTGTGGTC...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCTCAAGGTGCACATGCTaGAGGTGGGATGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPSRCTC*RWDASS
Trigger: GCTGCTGGCATCCCACCTGCAGCATGTGCACCTTGA...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCAGACAGAGTCCACTGGTaGCCATCCTGTACGGGTGGG +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAADRVHW*PSCTGG
Trigger: CCCACCCGTACAGGATGGGCACCAGTGGACTCTGTC...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAACCAGAGGCAGAGGGTTaGTGGTTGGCCAATTCACTG +
Preference number: 4 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQPEAEG*WLANSL
Trigger: CAGTGAATTGGCCAACCAGCAACCCTCTGCCTCTGG...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCGTCCCCTTCTTCACCTaGCTCTGTGCCACTAGCTGC +
Preference number: 4 (lower is better)
Translates to: LVRNRELSWITGQHLAITVPFFT*LCATSC
Trigger: GCAGCTAGTGGCACAGAGGCAGGTGAAGAAGGGGAC...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCATACCACCCATCCGGCTaGACTCCTTGGGCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAAYHPSG*TPWARC
Trigger: ACAGCGAGCCCAAGGAGTGCAGCCGGATGGGTGGTA...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGGTGACAAGGGACCCTTaGTTTTCTGGAGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLVTRDP*FSGAGP
Trigger: AGGCCCAGCTCCAGAAAAGCAAGGGTCCCTTGTCAC...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAAGGAGGATGGGTCAGGTaGTTTCCACCAGGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQGGWVR*FPPGVQ
Trigger: CTGAACACCTGGTGGAAAGCACCTGACCCATCCTCC...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTAAGTGGCTGTGAATTATaGTCTGGAGACCATCTCCAA +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLSGCEL*SGDHLQ
Trigger: TTGGAGATGGTCTCCAGAGCATAATTCACAGCCACT...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCAAACTGAACACCGAATaGATTGGTGGTGGTGGCACC +
Preference number: 4 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLAKLNTE*IGGGGT
Trigger: GGTGCCACCACCACCAATGCATTCGGTGTTCAGTTT...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCATGCCAGGTGCCAAGCTaGTGTCCTCGAGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAACQVPS*CPRGHC
Trigger: ACAGTGCCCTCGAGGACAGCAGCTTGGCACCTGGCA...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACCTGAGAAGGCACGGCTaGGCAGTGGGTGGGGCATGG +
Preference number: 4 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHLRRHG*AVGGAW
Trigger: CCATGCCCCACCCACTGCGCAGCCGTGCCTTCTCAG...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR GCA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTAGCTCCCTCCTATGCTaGCCCCAGGCCCGGGTGCTT +
Preference number: 4 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPSSLLC*PQARVL
Trigger: AAGCACCCGGGCCTGGGGGCAGCATAGGAGGGAGCT...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR GCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATCTGAGGGGTTGTGGCTaGTCTAGGACCTCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYLRGCG*SRTSSG
Trigger: TCCTGAGGAGGTCCTAGAGCAGCCACAACCCCTCAG...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTAAGTGCAAAGGATTCTTaGTCTGCTGGGACACTTTGT +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLSAKDS*SAGTLC
Trigger: ACAAAGTGTCCCAGCAGAGCAAGAATCCTTTGCACT...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCTTGGCATCTGCCAACTaGCCCGTCAGCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPLASAN*PVSCCF
Trigger: GAAGCAGCAGCTGACGGGGCAGTTGGCAGATGCCAA...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAAGGTAGCGGGAGACCATaGCAAACACCAACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQGSGRP*QTPTSP
Trigger: GGGAGAAGTTGGTGTTTGGCATGGTCTCCCGCTACC...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGGGTAGCGGGAGACCATaGCAAACACCAACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLGSGRP*QTPTSP
Trigger: GGGAGAAGTTGGTGTTTGGCATGGTCTCCCGCTACC...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCTGTGCAGCAAGTACTTaGCCTTGGCAACTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLACAAST*PWQLWE
Trigger: TTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACA...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTAGGATCTCCCTTGGCCTaGCTTCCAAACTGCTACTCA +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVGSPLA*LPNCYS
Trigger: TGAGTAGCAGTTTGGAAGGCAGGCCAAGGGAGATCC...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCGGATCTCCCTTGGCCTaGCTTCCAAACTGCTACTCA +
Preference number: 4 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVGSPLA*LPNCYS
Trigger: TGAGTAGCAGTTTGGAAGGCAGGCCAAGGGAGATCC...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCAGTGGGCCTGGGATTCTaGCTAATAACTTCTTGGATT +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPVGLGF*LITSWI
Trigger: AATCCAAGAAGTTATTAGGCAGAATCCCAGGCCCAC...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR GCA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTTCCTCCATGGAAGTTaGCCAGGGTGGAGAGATGGC +
Preference number: 4 (lower is better)
Translates to: RTGERDCISSNTGSVAAPFLHGS*PGWRDG
Trigger: GCCATCTCTCCACCCTGGGCAACTTCCATGGAGGAA...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460112.3
CDS-3UTR CCA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACATCCCTCCAGCAGCTTaGCCACATGCCATGAGTGCG +
Preference number: 4 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDIPPAA*PHAMSA
Trigger: CGCACTCATGGCATGTGGCCAAGCTGCTGGAGGGAT...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGATAGGTGGCTTGGCCTaGTTGCTCCAGGCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLIGGLA*LLQALH
Trigger: ATGGAGAGCCTGGAGCAACCAGGCCAAGCCACCTAT...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGGATGGCTCTCATAGGTaGCTTGGCCTGGTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLDGSHR*LGLVAP
Trigger: TGGAGCAACCAGGCCAAGCCACCTATGAGAGCCATC...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACACTGGGGGCCTTAGTTaGCCCTGGGCCTTGCATGAT +
Preference number: 4 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDTGGLS*PWALHD
Trigger: ATCATGCAAGGCCCAGGGCCAACTAAGGCCCCCAGT...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTAGGTTGGAATCCACGCTaGAAGCTCTGTCACAGGCTT +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVGWNPR*KLCHRL
Trigger: AAGCCTGTGACAGAGCTTCCAGCGTGGATTCCAACC...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATTGTTCAGGGGCACTATaGCGATGCCCTGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYCSGAL*RCPVGP
Trigger: AGGACCCACAGGGCATCGCCATAGTGCCCCTGAACA...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCATCCTGTACGGGTaGGAGCTCCATCCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: LVRNRELSWITGQHLAITPILYG*ELHPFA
Trigger: AGCAAAGGGATGGAGCTCCCACCCGTACAGGATGGG...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCAGGGGACAGAGTCCACTaGTGCCCATCCTGTACGGGT +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAAGDRVH*CPSCTG
Trigger: ACCCGTACAGGATGGGCACCAGTGGACTCTGTCCCC...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAAATCAGCCTCTCCATGTaGGGGACTGCTTTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQISLSM*GTALAL
Trigger: CAGAGCCAAAGCAGTCCCCCACATGGAGAGGCTGAT...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCATCCGGCTGCACTCCTTaGGCTCGCTGTCCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAASGCTP*ARCPLL
Trigger: AAGAAGGGGACAGCGAGCCCAAGGAGTGCAGCCGGA...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCATGGCTCTCAGGGGCTTaGCTGAGGCACTCGGAAGAC +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAAWLSGA*LRHSED
Trigger: GTCTTCCGAGTGCCTCAGCCAAGCCCCTGAGAGCCA...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATTGGAAGGGCCTTCCATaGCTGCTGCCACAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYWKGLP*LLPQVA
Trigger: AGCCACTTGTGGCAGCAGCCATGGAAGGCCCTTCCA...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCTTCCTTGTTGTCACCTaGGTTGGAAGGGCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLAFLVVT*VGRAFH
Trigger: ATGGAAGGCCCTTCCAACCCAGGTGACAACAAGGAA...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGCAAAAGGCAAGAGGATaGCATCCTCCCCAGCTTGAG +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKQKARG*HPPQLE
Trigger: CTCAAGCTGGGGAGGATGCCATCCTCTTGCCTTTTG...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTAACAGCTGGAGCTCATTaGCTGGAAGTTTTGGTCTAT +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLTAGAH*LEVLVY
Trigger: ATAGACCAAAACTTCCAGCCAATGAGCTCCAGCTGT...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGGATTGGTCCATGGGATaGCGCCTCAATTCCCTACAG +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKDWSMG*RLNSLQ
Trigger: CTGTAGGGAATTGAGGCGCCATCCCATGGACCAATC...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTAGTCTGTGGCATGATATaGTTGGTCTGCGGAATGATA +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLVCGMI*LVCGMI
Trigger: TATCATTCCGCAGACCAACCATATCATGCCACAGAC...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGGATATGATTGGTCTGTaGCATGATATGGTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAEDMIGL*HDMVGL
Trigger: CAGACCAACCATATCATGCCACAGACCAATCATATC...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATGAACACCGAATGCATTaGTGGTGGTGGCACCGGCAG +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYEHRMH*WWWHRQ
Trigger: CTGCCGGTGCCACCACCACCAATGCATTCGGTGTTC...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATTTCCCTCCCTGACTaGCTGGTCTTCCTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLAISLPD*LVFLFP
Trigger: AGGAAACAGGAAGACCAGCCAGTCAGGGAGGGAAAT...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCACTCGAGCCCTCCAGGTaGCCAAAGCTGAGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAALEPSR*PKLRGC
Trigger: ACAACCCCTCAGCTTTGGCCACCTGGAGGGCTCGAG...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCAGACGGCTTTTAAGTTaGCCTCCACCTCCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVRRLLS*PPPPPQ
Trigger: TTGGGGAGGAGGTGGAGGCCAACTTAAAAGCCGTCT...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGTGGGCAGGGATGCTGTaGCAGAGTGCTGGTAGAATT +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKWAGML*QSAGRI
Trigger: AATTCTACCAGCACTCTGCCACAGCATCCCTGCCCA...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGGCAAGTACTTGCCCTTaGCAACTGTGGGAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKASTCP*QLWEGE
Trigger: CTCTCCTTCCCACAGTTGCCAAGGGCAAGTACTTGC...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCGCAAGTACTTGCCCTTaGCAACTGTGGGAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVASTCP*QLWEGE
Trigger: CTCTCCTTCCCACAGTTGCCAAGGGCAAGTACTTGC...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCAGCTGGCCACAAGCCCTaGGGCAGAGTAGAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAAAGHKP*GRVELQ
Trigger: TTGCAGCTCTACTCTGCCCCAGGGCTTGTGGCCAGC...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCACAATGAGACTGCCCTaGCAGGAGTGTGGCACGCCA +
Preference number: 4 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPTMRLP*QECGTP
Trigger: TGGCGTGCCACACTCCTGCCAGGGCAGTCTCATTGT...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTCTGGTGTGCCTaGGCAGCTTTATGGCACATG +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLWLWCA*AALWHM
Trigger: CATGTGCCATAAAGCTGCCCAGGCACACCAGAGCCA...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATCTGCAGAAGCCTCATTaGGTGGGTTGGAATCCACGC +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYLQKPH*VGWNPR
Trigger: GCGTGGATTCCAACCCACTCAATGAGGCTTCTGCAG...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGGGTTGGTCTGCGGAATaGTATGATTGGTCCATGGGA +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKGWSAE*YDWSMG
Trigger: TCCCATGGACCAATCATATCATTCCGCAGACCAACC...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCAGGGGTGACATGGAATaGTATGATTGGTCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLARGDME*YDWSVA
Trigger: TGCCACAGACCAATCATATCATTCCATGTCACCCCT...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGTTTTCAAAGCATGTTTaGAGTCTCCAAGGAGGTCAA +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAEFSKHV*SLQGGQ
Trigger: TTGACCTCCTTGGAGACTTCAAACATGCTTTGAAAA...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCAGAAACTGGTGCCAGGTaGATGCCCTCAAGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAAETGAR*MPSRQP
Trigger: TGGCTGCCTTGAGGGCATTCACCTGGCACCAGTTTC...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCTTGGCTGGGTTGTGTaGTACCAAGGATTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LVRNRELSWITGQHLAITLGWVV*YQGLAP
Trigger: TGGGGCCAATCCTTGGTATCACACAACCCAGCCAAG...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGAGGATAGTTGGAATGTaGACAGAATATGGATCACGA +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAERIVGM*TEYGSR
Trigger: TCGTGATCCATATTCTGTTCACATTCCAACTATCCT...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGGAGAGTGGACACCACTaGACACACACGTCACTTGTG +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLESGHH*THTSLV
Trigger: CACAAGTGACGTGTGTGTGCAGTGGTGTCCACTCTC...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCATTCTCGGTGCTGCAATaGCGGGAGAGTGGACACCAC +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAAFSVLQ*RESGHH
Trigger: GTGGTGTCCACTCTCCCGGCATTGCAGCACCGAGAA...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCAGCTGCTTTTCTCGGTaGTGCAATGCCGGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPSCFSR*CNAGRV
Trigger: CACTCTCCCGGCATTGCAGCACCGAGAAAAGCAGCT...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCGCTCCAGGCTCTCCATaGTGCCAATGGAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPAPGSP*CQWSCF
Trigger: AAAGCAGCTCCATTGGCAGCATGGAGAGCCTGGAGC...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATGTTGGCCCTGGGCCTTaGATGATGCAGTCTGTAGAG +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYVGPGP*MMQSVE
Trigger: CTCTACAGACTGCATCATGCAAGGCCCAGGGCCAAC...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTGGTGGCCCCCATTGGTaGGCCGACTACCTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSGGPHW*ADYLLR
Trigger: CCTCAGGAGGTAGTCGGCGCACCAATGGGGGCCACC...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCTCAGATGCCCTGCGCTaGTCTCCATTGAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: LVRNRELSWITGQHLAITSDALR*SPLRSW
Trigger: CCAACTCCTCAATGGAGAGCAGCGCAGGGCATCTGA...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCATCAAGGTGCACATGCTaGAGGTGGGATGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAASRCTC*RWDASS
Trigger: GCTGCTGGCATCCCACCTGCAGCATGTGCACCTTGA...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCCCCCTGGTATCAAGGTaGACATGCTGCAGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPPLVSR*TCCRWD
Trigger: ATCCCACCTGCAGCATGTGCACCTTGATACCAGGGG...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCGCTCCATCCCTTTGCTaGCCCTGGTATCAAGGTGCA +
Preference number: 4 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPAPSLC*PWYQGA
Trigger: TGCACCTTGATACCAGGGGCAGCAAAGGGATGGAGC...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCCCAGAGGCAGAGGGTTaGTGGTTGGCCAATTCACTG +
Preference number: 4 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPPEAEG*WLANSL
Trigger: CAGTGAATTGGCCAACCAGCAACCCTCTGCCTCTGG...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTGGGTTTCCAAGTGTTaGCAGGTGCCAAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: RTGERDCISSNTGSVAAPWVSKC*QVPSCC
Trigger: ACAGCAGCTTGGCACCTGGCAACACTTGGAAACCCA...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTCCCCAGGAAATTCCTaGACTGTCAGCTTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLSPGNS*TVSFLG
Trigger: ACCCAGGAAGCTGACAGTGCAGGAATTTCCTGGGGA...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAATCCCCAGGAAATTCCTaGACTGTCAGCTTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQSPGNS*TVSFLG
Trigger: ACCCAGGAAGCTGACAGTGCAGGAATTTCCTGGGGA...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTAAGAGCTCCCTCCTATaGTGCCCCCAGGCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSKSSLL*CPQARV
Trigger: CACCCGGGCCTGGGGGCAGCATAGGAGGGAGCTCTT...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATTGCTGTTGCTGCTTCTaGTGCTGGGCTGCACGAAAG +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYCCCCF*CWAARK
Trigger: CTTTCGTGCAGCCCAGCAGCAGAAGCAGCAACAGCA...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTCCTGTTGCTTCTGCTaGTGCTGTTGCTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLSCCFC*CCCCFC
Trigger: GCAGAAGCAGCAACAGCAGCAGCAGAAGCAACAGGA...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGTGTGATAGTAACTCATaGACTGACTTCTCTATCAGC +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAECDSNS*TDFSIS
Trigger: GCTGATAGAGAAGTCAGTGCATGAGTTACTATCACA...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACCAGAAGGGAAATGCATaGTGGTGGCTGCTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDQKGNA*WWLLQG
Trigger: GCCCTGAAGCAGCCACCACCATGCATTTCCCTTCTG...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCATAGGTGGCTTGGCCTaGTTGCTCCAGGCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPIGGLA*LLQALH
Trigger: ATGGAGAGCCTGGAGCAACCAGGCCAAGCCACCTAT...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACGATGGCTCTCATAGGTaGCTTGGCCTGGTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDDGSHR*LGLVAP
Trigger: TGGAGCAACCAGGCCAAGCCACCTATGAGAGCCATC...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCAGGCCTTAGTTGGCCCTaGGCCTTGCATGATGCAGTC +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAAGLSWP*ALHDAV
Trigger: GACTGCATCATGCAAGGCCCAGGGCCAACTAAGGCC...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTAGGGTCCTATGAGATGTaGAGGTCTGCCAAAAGAAGC +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVGSYEM*RSAKRS
Trigger: GCTTCTTTTGGCAGACCTCCACATCTCATAGGACCC...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGTGGGGGACTGCTTTaGCTCTGGTGTCCCAAAACT +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLCGGLL*LWCPKT
Trigger: AGTTTTGGGACACCAGAGCCAAAGCAGTCCCCCACA...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTATCTGCTTGTTCTGTTTaGGTCCAGGAAACCTTTTTC +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLSACSV*VQETFF
Trigger: GAAAAAGGTTTCCTGGACCCAAACAGAACAAGCAGA...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGGGTTGGCCAATTCACTaGCTGCTCTGCTTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKGWPIH*LLCLFC
Trigger: ACAGAACAAGCAGAGCAGCCAGTGAATTGGCCAACC...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGCTGGGTCTCTTCCACTaGCTCCTTAGTGTCACACAG +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLLGLFH*LLSVTQ
Trigger: CTGTGTGACACTAAGGAGCCAGTGGAAGAGACCCAG...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGGATATGATTGGTCCATaGGATGGCGCCTCAATTCCC +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKDMIGP*DGASIP
Trigger: GGGAATTGAGGCGCCATCCCATGGACCAATCATATC...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTAGATATGATTGGTCTGTaGCATGATATGGTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLDMIGL*HDMVGL
Trigger: CAGACCAACCATATCATGCCACAGACCAATCATATC...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCACACCGAATGCATTGGTaGTGGTGGCACCGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAAHRMHW*WWHRQL
Trigger: CAACTGCCGGTGCCACCACCACCAATGCATTCGGTG...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGCCCTCCCTGACTGGCTaGTCTTCCTGTTTCCTGTTA +
Preference number: 4 (lower is better)
Translates to: RTGERDCISSNTGSVAAPPSLTG*SSCFLL
Trigger: TAACAGGAAACAGGAAGACCAGCCAGTCAGGGAGGG...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAAGAAAGGCCTTCTTCCTaGCTCCGAGAAGATCCGACT +
Preference number: 4 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQERPSS*LREDPT
Trigger: AGTCGGATCTTCTCGGAGCCAGGAAGAAGGCCTTTC...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCATGCTGCTTCTGCTGCTaGGCTGCACGAAAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAACCFCC*AARKSL
Trigger: CAGGCTCTTTCGTGCAGCCCAGCAGCAGAAGCAGCA...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCAGTACCAACTTCTCCTaGTTGGCCTCTGAATCGATG +
Preference number: 4 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLASTNFS*LASESM
Trigger: CATCGATTCAGAGGCCAACCAGGAGAAGTTGGTACT...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTTGGGTAGAAGCTTGTaGCTTCCCCAGGGTCTCCTA +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLLGRSL*LPQGLL
Trigger: TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAA...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTTGCTGCAGCTCCCTTaGGTAGAAGCTTGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLLLQLP*VEACGF
Trigger: GAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAA...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTTCCTAAGGGGCACCTaGGGGTACTCAACCTTTGCT +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLFLRGT*GYSTFA
Trigger: AGCAAAGGTTGAGTACCCCCAGGTGCCCCTTAGGAA...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTCTGGGGAGCTGGCTCTaGCTGGAGCTCCCAGCTACC +
Preference number: 4 (lower is better)
Translates to: RLDSRTRLCILLRSIPEILGSWL*LELPAT
Trigger: GGTAGCTGGGAGCTCCAGCCAGAGCCAGCTCCCCAG...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTCTGGGGAGCTGGCTCTaGCTGGAGCTCCCAGCTACC +
Preference number: 4 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSLGSWL*LELPAT
Trigger: GGTAGCTGGGAGCTCCAGCCAGAGCCAGCTCCCCAG...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCCTCACTGGCAGGCCTTaGAGGAGGGCTGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSLTGRP*RRAEPR
Trigger: CCTGGGCTCAGCCCTCCTCCAAGGCCTGCCAGTGAG...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR CCA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTCTCACTGGCAGGCCTTaGAGGAGGGCTGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RLDSRTRLCILLRSIPEILTGRP*RRAEPR
Trigger: CCTGGGCTCAGCCCTCCTCCAAGGCCTGCCAGTGAG...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTTTGGGGATCTCCCTTaGCCTGCCTTCCAAACTGCT +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLFGDLP*PAFQTA
Trigger: AGCAGTTTGGAAGGCAGGCCAAGGGAGATCCCCAAA...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCACTGATAACTGTCTTTaGGGATCTCCCTTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVTDNCL*GSPLAC
Trigger: GCAGGCCAAGGGAGATCCCCAAAGACAGTTATCAGT...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTATCTTTGAGGTTGCCTTaGAGAGCAGATCACCAAGGC +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVSLRLP*RADHQG
Trigger: GCCTTGGTGATCTGCTCTCCAAGGCAACCTCAAAGA...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCTCTTTGAGGTTGCCTTaGAGAGCAGATCACCAAGGC +
Preference number: 4 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVSLRLP*RADHQG
Trigger: GCCTTGGTGATCTGCTCTCCAAGGCAACCTCAAAGA...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAAGCCAGTGTCAAGAGCTaGATAGGAGTGAAGACGCTG +
Preference number: 4 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQASVKS*IGVKTL
Trigger: CAGCGTCTTCACTCCTATCCAGCTCTTGACACTGGC...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460112.3
CDS-3UTR TCA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTGCGCCGACTACCTCCTaGGGTCTCAGCCACATTAGG +
Preference number: 4 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPAPTTS*GLSHIR
Trigger: CCTAATGTGGCTGAGACCTCAGGAGGTAGTCGGCGC...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR TCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCTCCTGTGGACGGGATaGCATCTGAGAGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMLLWTG*HLRAGG
Trigger: ACCCCCAGCTCTCAGATGTCATCCCGTCCACAGGAG...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR TCA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGATTCAGGAGGCTGACTaGACTCACAGTTCTGATGGC +
Preference number: 4 (lower is better)
Translates to: RTGERDCISSNTGSVAAPIQEAD*THSSDG
Trigger: GCCATCAGAACTGTGAGTTCAGTCAGCCTCCTGAAT...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAAAGCTGCTTTAGTGGTTaGAGAACAGTCCGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQSCFSG*RTVRGL
Trigger: CAAGCCACGGACTGTTCTTCAACCACTAAAGCAGCT...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAAAGTGTCACACAGCTGTaGCAAGGGACCCTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQSVTQL*QGTLAF
Trigger: AAAAGCAAGGGTCCCTTGTCACAGCTGTGTGACACT...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGAGTGTCACACAGCTGTaGCAAGGGACCCTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: RTGERDCISSNTGSVAAPSVTQL*QGTLAF
Trigger: AAAAGCAAGGGTCCCTTGTCACAGCTGTGTGACACT...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATGCATCCTCCCCAGCTTaGGCAGTAGAAGCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYASSPA*AVEAFN
Trigger: ATTGAAGGCTTCTACTGCTCAAGCTGGGGAGGATGC...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACGCATCCTCCCCAGCTTaGGCAGTAGAAGCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDASSPA*AVEAFN
Trigger: ATTGAAGGCTTCTACTGCTCAAGCTGGGGAGGATGC...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCGTCTGCGGAATGATATaGTTGGTCCATGGGATGGCG +
Preference number: 4 (lower is better)
Translates to: LVRNRELSWITGQHLAITVCGMI*LVHGMA
Trigger: CGCCATCCCATGGACCAATCATATCATTCCGCAGAC...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGGATTGGTCTGTGGCATaGTATGGTTGGTCTGCGGAA +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLDWSVA*YGWSAE
Trigger: TTCCGCAGACCAACCATATCATGCCACAGACCAATC...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGGGCGCCAAGCTGATGTaGCTCTCTGAGAAGGCACGG +
Preference number: 4 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMGAKLM*LSEKAR
Trigger: CCGTGCCTTCTCAGAGAGTCACATCAGCTTGGCGCC...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR TCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCAGGTGGCCAAAGCTaGGGGGTTGTGGCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMPGGQS*GVVAAL
Trigger: TAGAGCAGCCACAACCCCTCAGCTTTGGCCACCTGG...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR TCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGGGAGGCGAAAAGTGCTaGAACTCTTGTTTGGCGGAT +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLGGEKC*NSCLAD
Trigger: ATCCGCCAAACAAGAGTTTCAGCACTTTTCGCCTCC...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCACTCCTGGTTGGCCTCTaGATCGATGCTGTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAALLVGL*IDAVQS
Trigger: GCTCTGAACAGCATCGATTCAGAGGCCAACCAGGAG...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCAGCTATATCCTGGTTaGGTCTCCAGCTGTGGGACT +
Preference number: 4 (lower is better)
Translates to: LVRNRELSWITGQHLAITQLYPG*VSSCGT
Trigger: AGTCCCACAGCTGGAGACTCAACCAGGATATAGCTG...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCTTCACATGGGATAGATaGCCCCCAACAGCTGTACAA +
Preference number: 4 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVFTWDR*PPTAVQ
Trigger: TTGTACAGCTGTTGGGGGTCATCTATCCCATGTGAA...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCTTTGAGTCTAATCTTTaGGGTTGCCTTGGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLAFESNL*GCLGEQ
Trigger: CTGCTCTCCAAGGCAACCTCAAAGATTAGACTCAAA...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATCCAGGCTCTCCATGCTaGCAATGGAGCTGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYPGSPC*QWSCFS
Trigger: AGAAAAGCAGCTCCATTGGCAGCATGGAGAGCCTGG...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGCTTGTCACTTGGTCATaGCCACTGAGGCAACAGAAC +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLLVTWS*PLRQQN
Trigger: GTTCTGTTGCCTCAGTGGGCATGACCAAGTGACAAG...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAACTTGTCACTTGGTCATaGCCACTGAGGCAACAGAAC +
Preference number: 4 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQLVTWS*PLRQQN
Trigger: GTTCTGTTGCCTCAGTGGGCATGACCAAGTGACAAG...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCACCCCTGGTATCAAGGTaGACATGCTGCAGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAAPLVSR*TCCRWD
Trigger: ATCCCACCTGCAGCATGTGCACCTTGATACCAGGGG...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCAGCTCCATCCCTTTGCTaGCCCTGGTATCAAGGTGCA +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAAAPSLC*PWYQGA
Trigger: TGCACCTTGATACCAGGGGCAGCAAAGGGATGGAGC...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCTCTTCCCTTTGTGGCTaGTGTGCAAAGGGGACAGAG +
Preference number: 4 (lower is better)
Translates to: LVRNRELSWITGQHLAITSSLCG*CAKGTE
Trigger: CTCTGTCCCCTTTGCACAGCAGCCACAAAGGGAAGA...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGAAACTGAACACCGAATaGATTGGTGGTGGTGGCACC +
Preference number: 4 (lower is better)
Translates to: RTGERDCISSNTGSVAAPKLNTE*IGGGGT
Trigger: GGTGCCACCACCACCAATGCATTCGGTGTTCAGTTT...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCCTTCTGCTGCTGGGCTaGACGAAAGAGCCTGTACTT +
Preference number: 4 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPLLLLG*TKEPVL
Trigger: AAGTACAGGCTCTTTCGTGCAGCCCAGCAGCAGAAG...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCAGCTCCTTGGCATCTaGCAACTGCCCCGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMQLLGI*QLPRQL
Trigger: CAGCTGACGGGGCAGTTGGCAGATGCCAAGGAGCTG...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR GCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGGGTAGAATTAGAAATTaGTGGGCCCCAGGAGTAGAC +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKGRIRN*WAPGVD
Trigger: GTCTACTCCTGGGGCCCAGCAATTTCTAATTCTACC...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTCTGGTGCCAGGTGAATaGCCTCAAGGCAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPLVPGE*PQGSQL
Trigger: GAGCTGGCTGCCTTGAGGGCATTCACCTGGCACCAG...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR GCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCATTGCCCAGGATGGAGTaGAGTGGTGTGGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAALPRME*SGVVSA
Trigger: AGCTGAGACCACACCACTGCACTCCATCCTGGGCAA...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR GCA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACATCAGCCATCATGCTTaGCTATTACCCATGGGGGCC +
Preference number: 4 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDISHHA*LLPMGA
Trigger: GGCCCCCATGGGTAATAGGCAAGCATGATGGCTGAT...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATAAGGGAAATGCATGGTaGTGGCTGCTTCAGGGCATC +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYKGNAW*WLLQGI
Trigger: GATGCCCTGAAGCAGCCACCACCATGCATTTCCCTT...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCTCAGGTGGCCCCCATTaGTGCGCCGACTACCTCCTG +
Preference number: 4 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSSGGPH*CADYLL
Trigger: CAGGAGGTAGTCGGCGCACCAATGGGGGCCACCTGA...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGGCTGTCCCGCCTCACTaGAGGTTGTGGTGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKAVPPH*RLWWAP
Trigger: AGGGGCCCACCACAACCTCCAGTGAGGCGGGACAGC...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTCACTTGTCACTTaGTCATGCCCACTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: LVRNRELSWITGQHLAITPSLVT*SCPLRQ
Trigger: TTGCCTCAGTGGGCATGACCAAGTGACAAGTGAGGG...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGGGGATCCAACAGCTTTaGTTGAGGCCTGCATCAGTA +
Preference number: 4 (lower is better)
Translates to: RTGERDCISSNTGSVAAPGIQQL*LRPASV
Trigger: TACTGATGCAGGCCTCAACCAAAGCTGTTGGATCCC...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGGGGTCCTATGAGATGTaGAGGTCTGCCAAAAGAAGC +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLGSYEM*RSAKRS
Trigger: GCTTCTTTTGGCAGACCTCCACATCTCATAGGACCC...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGCTTTTCTTCCCTTTGTaGCTGCTGTGCAAAGGGGAC +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLLFFPL*LLCKGD
Trigger: GTCCCCTTTGCACAGCAGCCACAAAGGGAAGAAAAG...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTAGGACTGCTTTGGCTCTaGTGTCCCAAAACTAAAGAC +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVGLLWL*CPKTKD
Trigger: GTCTTTAGTTTTGGGACACCAGAGCCAAAGCAGTCC...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATTGTGGGGGACTGCTTTaGCTCTGGTGTCCCAAAACT +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYCGGLL*LWCPKT
Trigger: AGTTTTGGGACACCAGAGCCAAAGCAGTCCCCCACA...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCAGTTAGAGGCAGTGAGTaGAGGACTTTCTGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAAVRGSE*RTFWGL
Trigger: GAGCCCCCAGAAAGTCCTCCACTCACTGCCTCTAAC...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTTGGCTCTCAGGGGCTTaGCTGAGGCACTCGGAAGAC +
Preference number: 4 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPWLSGA*LRHSED
Trigger: GTCTTCCGAGTGCCTCAGCCAAGCCCCTGAGAGCCA...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTGACTGGCCAGGCCTCTaGCCAGGGCTTATTCGTCCC +
Preference number: 4 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSDWPGL*PGLIRP
Trigger: GGGACGAATAAGCCCTGGCCAGAGGCCTGGCCAGTC...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGAGGCCCAAAGAGGACTaGCCAGGCCTCTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKRPKED*PGLWPG
Trigger: CCCTGGCCAGAGGCCTGGCCAGTCCTCTTTGGGCCT...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACCAAAAGGCAAGAGGATaGCATCCTCCCCAGCTTGAG +
Preference number: 4 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDQKARG*HPPQLE
Trigger: CTCAAGCTGGGGAGGATGCCATCCTCTTGCCTTTTG...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCATCTTGTTGCTATGAGTaGTTAAACCTGGCAAATGAG +
Preference number: 4 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPSCCYE*LNLANE
Trigger: CTCATTTGCCAGGTTTAACCACTCATAGCAACAAGA...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGATAGGTTTTGGTCTCTaGGTAAAAGTCTTGTTGCTA +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAEIGFGL*VKVLLL
Trigger: TAGCAACAAGACTTTTACCCAGAGACCAAAACCTAT...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGTTGGTCTATAGGTTTTaGTCTCTGGGTAAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAELVYRF*SLGKSL
Trigger: AAGACTTTTACCCAGAGACCAAAACCTATAGACCAA...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAAATTTCCCTCCCTGACTaGCTGGTCTTCCTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQISLPD*LVFLFP
Trigger: AGGAAACAGGAAGACCAGCCAGTCAGGGAGGGAAAT...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTAAAGAAATCACTGGAATaGAGTGCAAAGGATTCTTGC +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLKKSLE*SAKDSC
Trigger: GCAAGAATCCTTTGCACTCCATTCCAGTGATTTCTT...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGGCTGAAACTCTTGTTTaGCGGATTCAGTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKAETLV*RIQWLP
Trigger: AGGAAGCCACTGAATCCGCCAAACAAGAGTTTCAGC...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGTCTAGCAGCCCTCGCTaGGCCTCCCGCAAGACAGAA +
Preference number: 4 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMSSSPR*ASRKTE
Trigger: TTCTGTCTTGCGGGAGGCCCAGCGAGGGCTGCTAGA...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACTCTAGCAGCCCTCGCTaGGCCTCCCGCAAGACAGAA +
Preference number: 4 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHSSSPR*ASRKTE
Trigger: TTCTGTCTTGCGGGAGGCCCAGCGAGGGCTGCTAGA...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCAGACGGCTTTTAAGTTaGCCTCCACCTCCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPRRLLS*PPPPPQ
Trigger: TTGGGGAGGAGGTGGAGGCCAACTTAAAAGCCGTCT...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCAGAATTAGAAATTGCTaGGCCCCAGGAGTAGACTCT +
Preference number: 4 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLARIRNC*APGVDS
Trigger: AGAGTCTACTCCTGGGGCCCAGCAATTTCTAATTCT...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACTGGGCAGGGATGCTGTaGCAGAGTGCTGGTAGAATT +
Preference number: 4 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDWAGML*QSAGRI
Trigger: AATTCTACCAGCACTCTGCCACAGCATCCCTGCCCA...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACAGCCTCCCGAGTAGCTaGGACTACTGGTGCGTGCCA +
Preference number: 4 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHSLPSS*DYWCVP
Trigger: TGGCACGCACCAGTAGTCCCAGCTACTCGGGAGGCT...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCACTGGAGGGGAGAATaGCAGGGTTGCCATTCTAAC +
Preference number: 4 (lower is better)
Translates to: LVRNRELSWITGQHLAITHWRGE*QGCHSN
Trigger: GTTAGAATGGCAACCCTGCCATTCTCCCCTCCAGTG...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCAGCCAAGAAGGGAGTaGTGGAGGACACAAATGCAG +
Preference number: 4 (lower is better)
Translates to: LVRNRELSWITGQHLAITQPRRE*WRTQMQ
Trigger: CTGCATTTGTGTCCTCCACCACTCCCTTCTTGGCTG...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCCCCTTGATGACAATCTaGCAGGCATATCTATGTCAG +
Preference number: 4 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLAPLMTI*QAYLCQ
Trigger: CTGACATAGATATGCCTGCCAGATTGTCATCAAGGG...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp ATGAAACATATCAGCCTCATCCTCCCAATACAGGACATCTCAATTTGCTCATTGATGAGTGCGGCCTACTaGCAGGGGCGTTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: MKHISLILPIQDISICSLMSAAY*QGRSSS
Trigger: GGAGGAGGAACGCCCCTGTCAGTAGGCCGCACTCAT...CAATGAGCAAATTGAGATGTCCTGTATTGGGAGGATGAGGCTGATATGTTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR TCA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTGCGCCGACTACCTCCTaGGGTCTCAGCCACATTAGG +
Preference number: 4 (lower is better)
Translates to: RLDSRTRLCILLRSIPEIAPTTS*GLSHIR
Trigger: CCTAATGTGGCTGAGACCTCAGGAGGTAGTCGGCGC...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACCTGAACTCACAGTTCTaGTGGCCCTCACTTGTCACT +
Preference number: 4 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDLNSQF*WPSLVT
Trigger: AGTGACAAGTGAGGGCCATCAGAACTGTGAGTTCAG...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTGCCCTGTGGGTCCTATaGGATGTGGAGGTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPALWVL*DVEVCQ
Trigger: TTGGCAGACCTCCACATCTCATAGGACCCACAGGGC...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR TCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGGCCTTCCTCCTCTaGATTTCATTACGCAGATTG +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLWAFLL*ISLRRL
Trigger: CAATCTGCGTAATGAAATTCAGAGGAGGAAGGCCCA...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATAGTGTCACACAGCTGTaGCAAGGGACCCTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYSVTQL*QGTLAF
Trigger: AAAAGCAAGGGTCCCTTGTCACAGCTGTGTGACACT...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATGCATCATGCTTTTGTTaGAGAGCTTGTCTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYASCFC*RACLWG
Trigger: GCCCCAGAGACAAGCTCTTCAACAAAAGCATGATGC...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCGCATCATGCTTTTGTTaGAGAGCTTGTCTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LVRNRELSWITGQHLAITASCFC*RACLWG
Trigger: GCCCCAGAGACAAGCTCTTCAACAAAAGCATGATGC...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGTGCTTTCTCAGGGTCTaGGGAGGATGGGTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: IRLDSRTRLCILLRSIPECFLRV*GGWVRC
Trigger: GCACCTGACCCATCCTCCTCAGACCCTGAGAAAGCA...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGGGAGACCATCTCCAATaGCCTCCACGGACTCCACAG +
Preference number: 4 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMGDHLQ*PPRTPQ
Trigger: CTGTGGAGTCCGTGGAGGTCATTGGAGATGGTCTCC...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR TCA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGAGGGGTGACATGGAATaGTATGATTGGTCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: RTGERDCISSNTGSVAAPRGDME*YDWSVA
Trigger: TGCCACAGACCAATCATATCATTCCATGTCACCCCT...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATCAGAGGTTTCTGAACTaGAATACTGGGGTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYQRFLN*NTGVAA
Trigger: AGCTGCCACCCCAGTATTTCAGTTCAGAAACCTCTG...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCGGAACCAGAGGTTTCTaGACTGAAATACTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPGTRGF*TEILGW
Trigger: CCACCCCAGTATTTCAGTTCAGAAACCTCTGGTTCC...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACTGCTGGGACACTTTGTaGACCCTGTCTCGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHCWDTL*TLSRAL
Trigger: GAGGGCTCGAGACAGGGTTCACAAAGTGTCCCAGCA...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR TCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTAAATATTGTAATAAGCTaGGTAAGAGGTAGGGATTCC +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLNIVIS*VRGRDS
Trigger: GGAATCCCTACCTCTTACTCAGCTTATTACAATATT...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGCCCTGCTGCTACAGTTaGCCTTCAAGGACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: IRLDSRTRLCILLRSIPEPCCYS*PSRTLR
Trigger: CCTCAGGGTCCTTGAAGGTCAACTGTAGCAGCAGGG...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGCACCGTCACACACAATaGGACTGCCCTGGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: IRLDSRTRLCILLRSIPEHRHTQ*DCPGRS
Trigger: ACTCCTGCCAGGGCAGTCTCATTGTGTGTGACGGTG...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCAGGACTATGGATAGGTaGCCAAATTCCTTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLARTMDR*PNSFPV
Trigger: TACTGGAAAGGAATTTGGTCACCTATCCATAGTCCT...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGGCCACATGCCATGAGTaGGGCCTACTGACAGGGGCG +
Preference number: 4 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKATCHE*GLLTGA
Trigger: CGCCCCTGTCAGTAGGCCGCACTCATGGCATGTGGC...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACATGCATGGTGGTGGCTaGTTCAGGGCATCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHMHGGG*FRASLQ
Trigger: CTGGAGGGATGCCCTGAAGCAGCCACCACCATGCAT...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR GCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCAGTGTTGCAGCCAGAATaGCAGGACAAGCTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAAVLQPE*QDKLKA
Trigger: AGCCTTCAGCTTGTCCTGGCATTCTGGCTGCAACAC...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCACACGTCACTTGTGTTaGAGCCAGAATGCCAGGACA +
Preference number: 4 (lower is better)
Translates to: LVRNRELSWITGQHLAITTRHLC*SQNART
Trigger: TGTCCTGGCATTCTGGCTGCAACACAAGTGACGTGT...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATTGCTGCCAATGGAGCTaGTTTTCTCGGTGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYCCQWS*FSRCCN
Trigger: ATTGCAGCACCGAGAAAAGCAGCTCCATTGGCAGCA...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTGTGGCTTGGCCTGGTTaGTCCAGGCTCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: RLDSRTRLCILLRSIPEIVAWPG*SRLSML
Trigger: CAGCATGGAGAGCCTGGAGCAACCAGGCCAAGCCAC...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATGCTTTGGTTGAGGCCTaGATCAGTAGATGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYALVEA*ISRCSE
Trigger: CTCTGAGCATCTACTGATGCAGGCCTCAACCAAAGC...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCGCTTTGGTTGAGGCCTaGATCAGTAGATGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPALVEA*ISRCSE
Trigger: CTCTGAGCATCTACTGATGCAGGCCTCAACCAAAGC...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTGGGGCACTATGGCGATaGCCTGTGGGTCCTATGAGA +
Preference number: 4 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPGALWR*PVGPMR
Trigger: TCTCATAGGACCCACAGGGCATCGCCATAGTGCCCC...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR GCA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGTCAAGGTGCACATGCTaGAGGTGGGATGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: IRLDSRTRLCILLRSIPESRCTC*RWDASS
Trigger: GCTGCTGGCATCCCACCTGCAGCATGTGCACCTTGA...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACCTCCATGTGGGGGACTaGTTTGGCTCTGGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHLHVGD*FGSGVP
Trigger: TGGGACACCAGAGCCAAAGCAGTCCCCCACATGGAG...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR GCA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCTACCACCCATCCGGCTaGACTCCTTGGGCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSYHPSG*TPWARC
Trigger: ACAGCGAGCCCAAGGAGTGCAGCCGGATGGGTGGTA...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR GCA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCTGCCAGGTGCCAAGCTaGTGTCCTCGAGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSCQVPS*CPRGHC
Trigger: ACAGTGCCCTCGAGGACAGCAGCTTGGCACCTGGCA...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR GCA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTAGCTCCCTCCTATGCTaGCCCCAGGCCCGGGTGCTT +
Preference number: 4 (lower is better)
Translates to: LGDGREMTEPFSISGDFFSSLLC*PQARVL
Trigger: AAGCACCCGGGCCTGGGGGCAGCATAGGAGGGAGCT...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTAAGTGCAAAGGATTCTTaGTCTGCTGGGACACTTTGT +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVSAKDS*SAGTLC
Trigger: ACAAAGTGTCCCAGCAGAGCAAGAATCCTTTGCACT...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGATCACTGGAATGGAGTaGAAAGGATTCTTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKITGME*KGFLLC
Trigger: GCAGAGCAAGAATCCTTTGCACTCCATTCCAGTGAT...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCATCACTGGAATGGAGTaGAAAGGATTCTTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVITGME*KGFLLC
Trigger: GCAGAGCAAGAATCCTTTGCACTCCATTCCAGTGAT...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTACAAATTCATTGGATTTaGAGACGGCTTTTAAGTTGG +
Preference number: 4 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLQIHWI*RRLLSW
Trigger: CCAACTTAAAAGCCGTCTGCAAATCCAATGAATTTG...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACAACTGCCCCGTCAGCTaGTGCTTCTTCTCTATCAGT +
Preference number: 4 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDNCPVS*CFFSIS
Trigger: ACTGATAGAGAAGAAGCAGCAGCTGACGGGGCAGTT...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTCAGCTCCTTGGCATCTaGCAACTGCCCCGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: RLDSRTRLCILLRSIPEIQLLGI*QLPRQL
Trigger: CAGCTGACGGGGCAGTTGGCAGATGCCAAGGAGCTG...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGGAACAAACTGCTAATTaGTATCTACTTGCTGAGAAA +
Preference number: 4 (lower is better)
Translates to: SRQPALCEKWLATSPGAEEQTAN*YLLAEK
Trigger: TTTCTCAGCAAGTAGATAGCAATTAGCAGTTTGTTC...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCGTCCACCTGAGGGCTaGTTTTCCAGCATAGAAACT +
Preference number: 4 (lower is better)
Translates to: LVRNRELSWITGQHLAITRPPEG*FSSIET
Trigger: AGTTTCTATGCTGGAAAAGCAGCCCTCAGGTGGACG...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATCGTCCACCTGAGGGCTaGTTTTCCAGCATAGAAACT +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYRPPEG*FSSIET
Trigger: AGTTTCTATGCTGGAAAAGCAGCCCTCAGGTGGACG...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGGCAATGCCGGGAGAGTaGACACCACTGCACACACAC +
Preference number: 4 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMAMPGE*TPLHTH
Trigger: GTGTGTGTGCAGTGGTGTCCACTCTCCCGGCATTGC...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGGCAATGCCGGGAGAGTaGACACCACTGCACACACAC +
Preference number: 4 (lower is better)
Translates to: IRLDSRTRLCILLRSIPEAMPGE*TPLHTH
Trigger: GTGTGTGTGCAGTGGTGTCCACTCTCCCGGCATTGC...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGGGCCTTAGTTGGCCCTaGGCCTTGCATGATGCAGTC +
Preference number: 4 (lower is better)
Translates to: IRLDSRTRLCILLRSIPEGLSWP*ALHDAV
Trigger: GACTGCATCATGCAAGGCCCAGGGCCAACTAAGGCC...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAATCTGTCACAGGCTTTTaGGGATCCAACAGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQSVTGF*GSNSFG
Trigger: ACCAAAGCTGTTGGATCCCCAAAAGCCTGTGACAGA...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCGGGTCCTATGAGATGTaGAGGTCTGCCAAAAGAAGC +
Preference number: 4 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPGSYEM*RSAKRS
Trigger: GCTTCTTTTGGCAGACCTCCACATCTCATAGGACCC...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCTCCGGCTGCACTCCTTaGGCTCGCTGTCCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSSGCTP*ARCPLL
Trigger: AAGAAGGGGACAGCGAGCCCAAGGAGTGCAGCCGGA...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGGAGTGGAGGACTTTCTaGGGGCTCCTGGGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMEWRTF*GLLGLF
Trigger: GAAGAGACCCAGGAGCCCCCAGAAAGTCCTCCACTC...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATTTCCTTGTTGTCACCTaGGTTGGAAGGGCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYFLVVT*VGRAFH
Trigger: ATGGAAGGCCCTTCCAACCCAGGTGACAACAAGGAA...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTACTGGAGCTCATTGGCTaGAAGTTTTGGTCTATAGGT +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVLELIG*KFWSIG
Trigger: ACCTATAGACCAAAACTTCCAGCCAATGAGCTCCAG...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACCACCGAATGCATTGGTaGTGGTGGCACCGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHHRMHW*WWHRQL
Trigger: CAACTGCCGGTGCCACCACCACCAATGCATTCGGTG...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTTCTCAAGGCAAGGATaGAAAGGGGTTGCCCATGAA +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLFSRQG*KGVAHE
Trigger: TTCATGGGCAACCCCTTTCCATCCTTGCCTTGAGAA...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTTGCTGCTTCTGCTGCTaGGCTGCACGAAAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPCCFCC*AARKSL
Trigger: CAGGCTCTTTCGTGCAGCCCAGCAGCAGAAGCAGCA...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTTCTAGCAGCCCTCGCTaGGCCTCCCGCAAGACAGAA +
Preference number: 4 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSSSSPR*ASRKTE
Trigger: TTCTGTCTTGCGGGAGGCCCAGCGAGGGCTGCTAGA...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCAACTTCTCCTGGTTaGCCTCTGAATCGATGCTGT +
Preference number: 4 (lower is better)
Translates to: LVRNRELSWITGQHLAITPTSPG*PLNRCC
Trigger: ACAGCATCGATTCAGAGGCCAACCAGGAGAAGTTGG...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGAGTACCAACTTCTCCTaGTTGGCCTCTGAATCGATG +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLSTNFS*LASESM
Trigger: CATCGATTCAGAGGCCAACCAGGAGAAGTTGGTACT...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCAGAATTAGAAATTGCTaGGCCCCAGGAGTAGACTCT +
Preference number: 4 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVRIRNC*APGVDS
Trigger: AGAGTCTACTCCTGGGGCCCAGCAATTTCTAATTCT...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTCCAGGGTAGAGGGCTaGAACAAACTGCTAATTGCT +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLSRVEG*NKLLIA
Trigger: AGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGA...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTCCAGGGTCTCCTAGCTaGTTAGGACCACTGCTAGGG +
Preference number: 4 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPPGSPS*LGPLLG
Trigger: CCCTAGCAGTGGTCCTAACCAGCTAGGAGACCCTGG...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTAATGAAGGCACTTCCTTaGTTCTCTGTGCAGCAAGTA +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVMKALP*FSVQQV
Trigger: TACTTGCTGCACAGAGAACCAAGGAAGTGCCTTCAT...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTAAGGCTGTTGATGATATaGGTGGGTGATGAGTACTTG +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVRLLMI*VGDEYL
Trigger: CAAGTACTCATCACCCACCCATATCATCAACAGCCT...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCGCTGGCCACAAGCCCTaGGGCAGAGTAGAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSAGHKP*GRVELQ
Trigger: TTGCAGCTCTACTCTGCCCCAGGGCTTGTGGCCAGC...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAATGTGATACCAAGGATTaGCCCCAGTTAGTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQCDTKD*PQLVRN
Trigger: GTTCCTCACTAACTGGGGCCAATCCTTGGTATCACA...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCATTTGGGGATCTCCCTTaGCCTGCCTTCCAAACTGCT +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAAFGDLP*PAFQTA
Trigger: AGCAGTTTGGAAGGCAGGCCAAGGGAGATCCCCAAA...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTTCTGGGGCTTGCTACTaGCAGAGCAGCACTGTCAGG +
Preference number: 4 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPSGACY*QSSTVR
Trigger: CCTGACAGTGCTGCTCTGCCAGTAGCAAGCCCCAGA...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR TCA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTCAGTCCGTGGCTTGTTaGACAAGGGAGCCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSQSVAC*TREPEA
Trigger: TGCCTCTGGCTCCCTTGTTCAACAAGCCACGGACTG...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACTGGGCCTTCCTCCTCTaGATTTCATTACGCAGATTG +
Preference number: 4 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDWAFLL*ISLRRL
Trigger: CAATCTGCGTAATGAAATTCAGAGGAGGAAGGCCCA...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCGGAGACCATCTCCAATaGCCTCCACGGACTCCACAG +
Preference number: 4 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSGDHLQ*PPRTPQ
Trigger: CTGTGGAGTCCGTGGAGGTCATTGGAGATGGTCTCC...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR TCA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGCCAGGTGGCCAAAGCTaGGGGGTTGTGGCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKPGGQS*GVVAAL
Trigger: TAGAGCAGCCACAACCCCTCAGCTTTGGCCACCTGG...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTTGCTGGGACACTTTGTaGACCCTGTCTCGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: RLDSRTRLCILLRSIPEICWDTL*TLSRAL
Trigger: GAGGGCTCGAGACAGGGTTCACAAAGTGTCCCAGCA...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp ATGAAACATATCAGCCTCATCCTCCCAATACAGGACATCTCAATTTGCTCATTGGCCTTGGAGGAGGGCTaGGCCCAGGAACTGAGAACA +
Preference number: 4 (lower is better)
Translates to: MKHISLILPIQDISICSLALEEG*AQELRT
Trigger: TGTTCTCAGTTCCTGGGCTCAGCCCTCCTCCAAGGC...CAATGAGCAAATTGAGATGTCCTGTATTGGGAGGATGAGGCTGATATGTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATCTTCTGGGACAAAGCTaGCTTGCCTCCATCTTCAAT +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYLLGQS*LASIFN
Trigger: ATTGAAGATGGAGGCAAGGCAGCTTTGTCCCAGAAG...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR GCA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTAGCAGCTTGGCCACATaGCATGAGTGCGGCCTACTG +
Preference number: 4 (lower is better)
Translates to: RLDSRTRLCILLRSIPEISSLAT*HECGLL
Trigger: CAGTAGGCCGCACTCATGGCATGTGGCCAAGCTGCT...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCGTGGCTTGGCCTGGTTaGTCCAGGCTCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGVAWPG*SRLSML
Trigger: CAGCATGGAGAGCCTGGAGCAACCAGGCCAAGCCAC...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCACTTGTCACTTGGTCATaGCCACTGAGGCAACAGAAC +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAALVTWS*PLRQQN
Trigger: GTTCTGTTGCCTCAGTGGGCATGACCAAGTGACAAG...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp ATGAAACATATCAGCCTCATCCTCCCAATACAGGACATCTCAATTTGCTCATTGGACAGAGTCCACTGGTaGCCATCCTGTACGGGTGGG +
Preference number: 4 (lower is better)
Translates to: MKHISLILPIQDISICSLDRVHW*PSCTGG
Trigger: CCCACCCGTACAGGATGGGCACCAGTGGACTCTGTC...CAATGAGCAAATTGAGATGTCCTGTATTGGGAGGATGAGGCTGATATGTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTCCAGAGGCAGAGGGTTaGTGGTTGGCCAATTCACTG +
Preference number: 4 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPPEAEG*WLANSL
Trigger: CAGTGAATTGGCCAACCAGCAACCCTCTGCCTCTGG...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR GCA 90 bp ATGAAACATATCAGCCTCATCCTCCCAATACAGGACATCTCAATTTGCTCATTGTACCACCCATCCGGCTaGACTCCTTGGGCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: MKHISLILPIQDISICSLYHPSG*TPWARC
Trigger: ACAGCGAGCCCAAGGAGTGCAGCCGGATGGGTGGTA...CAATGAGCAAATTGAGATGTCCTGTATTGGGAGGATGAGGCTGATATGTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGGAGGATGGGTCAGGTaGTTTCCACCAGGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHGGWVR*FPPGVQ
Trigger: CTGAACACCTGGTGGAAAGCACCTGACCCATCCTCC...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR GCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGAGTGGCTGTGAATTATaGTCTGGAGACCATCTCCAA +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLSGCEL*SGDHLQ
Trigger: TTGGAGATGGTCTCCAGAGCATAATTCACAGCCACT...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGCCCCAGAACAATAAATaGAAGGATCATGGACTAGAG +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKPQNNK*KDHGLE
Trigger: CTCTAGTCCATGATCCTTGCATTTATTGTTCTGGGG...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCAAAACTGAACACCGAATaGATTGGTGGTGGTGGCACC +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAAKLNTE*IGGGGT
Trigger: GGTGCCACCACCACCAATGCATTCGGTGTTCAGTTT...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGTGTTGCTGCTTCTGCTaGTGGGCTGCACGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: IRLDSRTRLCILLRSIPECCCFC*WAARKS
Trigger: GCTCTTTCGTGCAGCCCAGCAGCAGAAGCAGCAACA...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGTGCTGTTGCTGCTTCTaGTGCTGGGCTGCACGAAAG +
Preference number: 4 (lower is better)
Translates to: IRLDSRTRLCILLRSIPECCCCF*CWAARK
Trigger: CTTTCGTGCAGCCCAGCAGCAGAAGCAGCAACAGCA...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCAAACTGCCCCGTCAGCTaGTGCTTCTTCTCTATCAGT +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAANCPVS*CFFSIS
Trigger: ACTGATAGAGAAGAAGCAGCAGCTGACGGGGCAGTT...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGGGTAGCGGGAGACCATaGCAAACACCAACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: IRLDSRTRLCILLRSIPEGSGRP*QTPTSP
Trigger: GGGAGAAGTTGGTGTTTGGCATGGTCTCCCGCTACC...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCATGGCTGGGCAGGGATaGTGTGGCAGAGTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSMAGQG*CGRVLV
Trigger: TACCAGCACTCTGCCACAGCATCCCTGCCCAGCCAT...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR GCA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTCTCTGTGCTTTCCCCTaGAAAGCTTGGGTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: RLDSRTRLCILLRSIPEILCAFP*KAWVRP
Trigger: GGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAG...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTAGTTTGTCCTAGAGCCTaGTCAGAAGAAAAGATGACA +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVVCPRA*SEEKMT
Trigger: TGTCATCTTTTCTTCTGAGCAGGCTCTAGGACAAAC...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCACAGGGGAGAGAGACTaGATCTCAAGTAATACTGGC +
Preference number: 4 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPTGERD*ISSNTG
Trigger: GCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGT...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGGCCTGCCTTCCAAACTaGTACTCACTGGCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: IRLDSRTRLCILLRSIPEACLPN*YSLAGL
Trigger: AAGGCCTGCCAGTGAGTAGCAGTTTGGAAGGCAGGC...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCACTGGGGGCCTTAGTTaGCCCTGGGCCTTGCATGAT +
Preference number: 4 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSTGGLS*PWALHD
Trigger: ATCATGCAAGGCCCAGGGCCAACTAAGGCCCCCAGT...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCAAGAAGCCTCATTGAGTaGGTTGGAATCCACGCTGGA +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAARSLIE*VGIHAG
Trigger: TCCAGCGTGGATTCCAACCCACTCAATGAGGCTTCT...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCTGTTCAGGGGCACTATaGCGATGCCCTGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSCSGAL*RCPVGP
Trigger: AGGACCCACAGGGCATCGCCATAGTGCCCCTGAACA...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTCTTTCTTTCTTTGCTaGACTGGTCATGGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLSFFLC*TGHGFL
Trigger: GAGGAACCCATGACCAGTCCAGCAAAGAAAGAAAGA...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGCAGAGGGTTGCTGGTTaGCCAATTCACTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: IRLDSRTRLCILLRSIPEQRVAG*PIHWLL
Trigger: GAGCAGCCAGTGAATTGGCCAACCAGCAACCCTCTG...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTTGTTGTCACCTGGGTTaGAAGGGCCTTCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPCCHLG*KGLPWL
Trigger: CAGCCATGGAAGGCCCTTCCAACCCAGGTGACAACA...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAACTGGAGCTCATTGGCTaGAAGTTTTGGTCTATAGGT +
Preference number: 4 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQLELIG*KFWSIG
Trigger: ACCTATAGACCAAAACTTCCAGCCAATGAGCTCCAG...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGGTCTGTGGCATGATATaGTTGGTCTGCGGAATGATA +
Preference number: 4 (lower is better)
Translates to: RTGERDCISSNTGSVAAPVCGMI*LVCGMI
Trigger: TATCATTCCGCAGACCAACCATATCATGCCACAGAC...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCACCGAGAAGATCCGACTaGGTCTCATCACCTTTGCTA +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAAPRRSD*VSSPLL
Trigger: TAGCAAAGGTGATGAGACCCAGTCGGATCTTCTCGG...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCCTCGAGCCCTCCAGGTaGCCAAAGCTGAGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGLEPSR*PKLRGC
Trigger: ACAACCCCTCAGCTTTGGCCACCTGGAGGGCTCGAG...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGGAGGCAAGAAATCACTaGAATGGAGTGCAAAGGATT +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKEARNH*NGVQRI
Trigger: AATCCTTTGCACTCCATTCCAGTGATTTCTTGCCTC...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTGTTTGGCGGATTCAGTaGCTTCCTGTCCCGATGTCC +
Preference number: 4 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPVWRIQ*LPVPMS
Trigger: GGACATCGGGACAGGAAGCCACTGAATCCGCCAAAC...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCGCTGAAACTCTTGTTTaGCGGATTCAGTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPAETLV*RIQWLP
Trigger: AGGAAGCCACTGAATCCGCCAAACAAGAGTTTCAGC...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACAAAGCACTTCCCACATaGCTGGGCAGGGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHKALPT*LGRDAV
Trigger: CACAGCATCCCTGCCCAGCCATGTGGGAAGTGCTTT...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCTCCAGGGTAGAGGGCTaGAACAAACTGCTAATTGCT +
Preference number: 4 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPSRVEG*NKLLIA
Trigger: AGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGA...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCTCTGTGAGAAATGGCTaGCCACAAGCCCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSSVRNG*PQALGQ
Trigger: CTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGA...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCAGGATGGAGTGCAGTaGTGTGGTCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMQDGVQ*CGLSSL
Trigger: CAGTGAGCTGAGACCACACCACTGCACTCCATCCTG...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCAACAGGGAGCTAAGCTaGATAACAGGGCAGCATTTG +
Preference number: 4 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPNRELS*ITGQHL
Trigger: CAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTT...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACTGTGATACCAAGGATTaGCCCCAGTTAGTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDCDTKD*PQLVRN
Trigger: GTTCCTCACTAACTGGGGCCAATCCTTGGTATCACA...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCAAGTAGAATCTTCCACTaGAGGGGAGAATGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAASRIFH*RGEWQG
Trigger: ACCCTGCCATTCTCCCCTCCAGTGGAAGATTCTACT...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAACTACCTTCTCAATCTTaGCTGGCTTGTGTAAGCCTA +
Preference number: 4 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQLPSQS*LACVSL
Trigger: TAGGCTTACACAAGCCAGCCAAGATTGAGAAGGTAG...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGCTACCTTCTCAATCTTaGCTGGCTTGTGTAAGCCTA +
Preference number: 4 (lower is better)
Translates to: RTGERDCISSNTGSVAAPLPSQS*LACVSL
Trigger: TAGGCTTACACAAGCCAGCCAAGATTGAGAAGGTAG...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTGCCCTGGCAGGAGTGTaGCACGCCAGTGTCTGTTTA +
Preference number: 4 (lower is better)
Translates to: RLDSRTRLCILLRSIPEIALAGV*HASVCL
Trigger: TAAACAGACACTGGCGTGCCACACTCCTGCCAGGGC...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTCAAACTGCTACTCACTaGCAGGCCTTGGAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: RLDSRTRLCILLRSIPEIQTATH*QALEEG
Trigger: GCCCTCCTCCAAGGCCTGCCAGTGAGTAGCAGTTTG...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTTGAGTCTCCAGCTGTaGGACTCAGGAAGATTCAAT +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLLSLQL*DSGRFN
Trigger: ATTGAATCTTCCTGAGTCCCACAGCTGGAGACTCAA...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGCCCTTGATGACAATCTaGCAGGCATATCTATGTCAG +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLPLMTI*QAYLCQ
Trigger: CTGACATAGATATGCCTGCCAGATTGTCATCAAGGG...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTGCGTCCTCCCTTAGCTaGGACCCATCTGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LGDGREMTEPFSISGDFFASSLS*DPSALQ
Trigger: CTGGAGGGCAGATGGGTCCCAGCTAAGGGAGGACGC...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460112.3
3UTR CAA 72 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTaGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTS*VLCAASTCPWQ
Trigger: TTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTCTGCAGAAGCCTCATTaGGTGGGTTGGAATCCACGC +
Preference number: 4 (lower is better)
Translates to: RLDSRTRLCILLRSIPEILQKPH*VGWNPR
Trigger: GCGTGGATTCCAACCCACTCAATGAGGCTTCTGCAG...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCAGGAAACCTTTTTCTaGGGGGTGTCCATCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMQETFF*GVSISL
Trigger: GAGGCTGATGGACACCCCTCAGAAAAAGGTTTCCTG...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR TCA 90 bp ATGAAACATATCAGCCTCATCCTCCCAATACAGGACATCTCAATTTGCTCATTGTGCTTTCTCAGGGTCTaGGGAGGATGGGTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: MKHISLILPIQDISICSLCFLRV*GGWVRC
Trigger: GCACCTGACCCATCCTCCTCAGACCCTGAGAAAGCA...CAATGAGCAAATTGAGATGTCCTGTATTGGGAGGATGAGGCTGATATGTTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGATTATGATAGCAAACTaGACACCGAATGCATTGGTG +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKIMIAN*TPNALV
Trigger: CACCAATGCATTCGGTGTTCAGTTTGCTATCATAAT...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTGCTGATGTGACTCTCTaGGAAGGCACGGCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: LGDGREMTEPFSISGDFFADVTL*EGTAAQ
Trigger: CTGCGCAGCCGTGCCTTCTCAGAGAGTCACATCAGC...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCTGGGTGATGAGTACTTaGTGTCTTTGGTGTCCTAGT +
Preference number: 4 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPWVMST*CLWCPS
Trigger: ACTAGGACACCAAAGACATCAAGTACTCATCACCCA...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCGAAACTGGTGCCAGGTaGATGCCCTCAAGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGETGAR*MPSRQP
Trigger: TGGCTGCCTTGAGGGCATTCACCTGGCACCAGTTTC...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACGCTCAGAAGAAAAGATaGCAACTATGGCCTCCATTG +
Preference number: 4 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDAQKKR*QLWPPL
Trigger: CAATGGAGGCCATAGTTGTCATCTTTTCTTCTGAGC...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGAGGACTATGGATAGGTaGCCAAATTCCTTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLRTMDR*PNSFPV
Trigger: TACTGGAAAGGAATTTGGTCACCTATCCATAGTCCT...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATTTTGAGTCTAATCTTTaGGGTTGCCTTGGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYFESNL*GCLGEQ
Trigger: CTGCTCTCCAAGGCAACCTCAAAGATTAGACTCAAA...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGTGTTGCAGCCAGAATaGCAGGACAAGCTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHVLQPE*QDKLKA
Trigger: AGCCTTCAGCTTGTCCTGGCATTCTGGCTGCAACAC...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR GCA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTTGCTTTTCTCGGTGCTaGAATGCCGGGAGAGTGGAC +
Preference number: 4 (lower is better)
Translates to: RLDSRTRLCILLRSIPEICFSRC*NAGRVD
Trigger: GTCCACTCTCCCGGCATTGCAGCACCGAGAAAAGCA...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTTCAGATGCCCTGCGCTaGTCTCCATTGAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSSDALR*SPLRSW
Trigger: CCAACTCCTCAATGGAGAGCAGCGCAGGGCATCTGA...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTGCCTGCATCAGTAGATaGTCAGAGCCCTGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSACISR*SEPCWL
Trigger: CAGCCAACAGGGCTCTGAGCATCTACTGATGCAGGC...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGGGGGCACTATGGCGATaGCCTGTGGGTCCTATGAGA +
Preference number: 4 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKGALWR*PVGPMR
Trigger: TCTCATAGGACCCACAGGGCATCGCCATAGTGCCCC...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTGTATCAAGGTGCACATaGTGCAGGTGGGATGCCAGC +
Preference number: 4 (lower is better)
Translates to: RLDSRTRLCILLRSIPEIVSRCT*CRWDAS
Trigger: GCTGGCATCCCACCTGCAGCATGTGCACCTTGATAC...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACTCTTCCCTTTGTGGCTaGTGTGCAAAGGGGACAGAG +
Preference number: 4 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHSSLCG*CAKGTE
Trigger: CTCTGTCCCCTTTGCACAGCAGCCACAAAGGGAAGA...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR GCA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACTGGTCTTTCTTTCTTTaGTGGACTGGTCATGGGTTC +
Preference number: 4 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDWSFFL*WTGHGF
Trigger: GAACCCATGACCAGTCCAGCAAAGAAAGAAAGACCA...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTGAGCTCCTTGAACACTaGAGGAGTAAGAGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPELLEH*RSKSRS
Trigger: GGACCTGCTCTTACTCCTGCAGTGTTCAAGGAGCTC...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR GCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGGAGCTCCTTGAACACTaGAGGAGTAAGAGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMELLEH*RSKSRS
Trigger: GGACCTGCTCTTACTCCTGCAGTGTTCAAGGAGCTC...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR GCA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTTGTTGCTGCTTCTGCTaGTGGGCTGCACGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: RLDSRTRLCILLRSIPEICCCFC*WAARKS
Trigger: GCTCTTTCGTGCAGCCCAGCAGCAGAAGCAGCAACA...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCATCACTGGAATGGAGTaGAAAGGATTCTTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPITGME*KGFLLC
Trigger: GCAGAGCAAGAATCCTTTGCACTCCATTCCAGTGAT...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCATGGCCTCTGAATCGATaGTGTTCAGAGCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAAWPLNR*CSEHSP
Trigger: TGGAGAATGCTCTGAACAGCATCGATTCAGAGGCCA...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTTGCCCCGTCAGCTGCTaGTTCTTCTCTATCAGTACC +
Preference number: 4 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPCPVSC*FFSIST
Trigger: GGTACTGATAGAGAAGAAGCAGCAGCTGACGGGGCA...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR GCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAACTGATCTGCAGAAAATaGTTTCCTTCTGGGCTAACT +
Preference number: 4 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQLICRK*FPSGLT
Trigger: AGTTAGCCCAGAAGGAAAGCATTTTCTGCAGATCAG...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGGTGGTCTCAGCTCACTaGAATCTCTGCCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMVVSAH*NLCLPG
Trigger: ACCTGGAAGGCAGAGATTGCAGTGAGCTGAGACCAC...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR GCA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTCAACGCCTTGGCACTTaGTTACCTAGCCACGGTGGA +
Preference number: 4 (lower is better)
Translates to: RLDSRTRLCILLRSIPEIQRLGT*LPSHGG
Trigger: TCCACCGTGGCTAGGTAAGCAAGTGCCAAGGCGTTG...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTAGAAAAACTTAAACCCTaGTGGGGAATGCTAAACTCA +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVEKLKP*WGMLNS
Trigger: TGAGTTTAGCATTCCCCAGCAGGGTTTAAGTTTTTC...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCGGCTGGGTCTTCAATTaGTCTGGGGAGCTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGGWVFN*SGELAL
Trigger: CAGAGCCAGCTCCCCAGAGCAATTGAAGACCCAGCC...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACGGCTATGGCAGATCCTaGTATTTAACTGGGGATGAT +
Preference number: 4 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDGYGRS*YLTGDD
Trigger: ATCATCCCCAGTTAAATAGCAGGATCTGCCATAGCC...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCATCCCTCCAGCAGCTTaGCCACATGCCATGAGTGCG +
Preference number: 4 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGIPPAA*PHAMSA
Trigger: CGCACTCATGGCATGTGGCCAAGCTGCTGGAGGGAT...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGTCTCCATGCTGCCAATaGAGCTGCTTTTCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: IRLDSRTRLCILLRSIPESPCCQ*SCFSRC
Trigger: GCACCGAGAAAAGCAGCTCCATTGGCAGCATGGAGA...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCCTCACTTGTCACTTaGTCATGCCCACTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMPSLVT*SCPLRQ
Trigger: TTGCCTCAGTGGGCATGACCAAGTGACAAGTGAGGG...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCATCTGTCACAGGCTTTTaGGGATCCAACAGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAASVTGF*GSNSFG
Trigger: ACCAAAGCTGTTGGATCCCCAAAAGCCTGTGACAGA...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGGTTGGAATCCACGCTaGAAGCTCTGTCACAGGCTT +
Preference number: 4 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHGWNPR*KLCHRL
Trigger: AAGCCTGTGACAGAGCTTCCAGCGTGGATTCCAACC...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTCAGAGGGTTGCTGGTTaGCCAATTCACTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSQRVAG*PIHWLL
Trigger: GAGCAGCCAGTGAATTGGCCAACCAGCAACCCTCTG...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTCTGGGTCTCTTCCACTaGCTCCTTAGTGTCACACAG +
Preference number: 4 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPLGLFH*LLSVTQ
Trigger: CTGTGTGACACTAAGGAGCCAGTGGAAGAGACCCAG...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTCTTTCTGGGGGCTCCTaGGTCTCTTCCACTGGCTCC +
Preference number: 4 (lower is better)
Translates to: LGDGREMTEPFSISGDFFLSGGS*VSSTGS
Trigger: GGAGCCAGTGGAAGAGACCCAGGAGCCCCCAGAAAG...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTTGTTGTCACCTGGGTTaGAAGGGCCTTCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: RLDSRTRLCILLRSIPEICCHLG*KGLPWL
Trigger: CAGCCATGGAAGGCCCTTCCAACCCAGGTGACAACA...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGCAAAAGGCAAGAGGATaGCATCCTCCCCAGCTTGAG +
Preference number: 4 (lower is better)
Translates to: IRLDSRTRLCILLRSIPEQKARG*HPPQLE
Trigger: CTCAAGCTGGGGAGGATGCCATCCTCTTGCCTTTTG...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGTCTTGTTGCTATGAGTaGTTAAACCTGGCAAATGAG +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKSCCYE*LNLANE
Trigger: CTCATTTGCCAGGTTTAACCACTCATAGCAACAAGA...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCATTGGCTGGAAGTTTTaGTCTATAGGTTTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVIGWKF*SIGFGL
Trigger: GAGACCAAAACCTATAGACCAAAACTTCCAGCCAAT...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGGATTGGTCCATGGGATaGCGCCTCAATTCCCTACAG +
Preference number: 4 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMDWSMG*RLNSLQ
Trigger: CTGTAGGGAATTGAGGCGCCATCCCATGGACCAATC...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGAACATTCTGAGTAAGTaGGAGTTTCTGACTGAAGGG +
Preference number: 4 (lower is better)
Translates to: RTGERDCISSNTGSVAAPNILSK*EFLTEG
Trigger: CCCTTCAGTCAGAAACTCCCACTTACTCAGAATGTT...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATCCTGTTTCCTGTTATTaGATTCCATTTGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYPVSCY*IPFVPR
Trigger: CCTGGGGACAAATGGAATCCAATAACAGGAAACAGG...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGGAAAGGCCTTCTTCCTaGCTCCGAGAAGATCCGACT +
Preference number: 4 (lower is better)
Translates to: IRLDSRTRLCILLRSIPEERPSS*LREDPT
Trigger: AGTCGGATCTTCTCGGAGCCAGGAAGAAGGCCTTTC...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGACTGAAATACTGGGGTaGCAGCTCCTCTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMTEILG*QLLFLL
Trigger: GAGGAGGAAGAGGAGCTGCCACCCCAGTATTTCAGT...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGGAGGCAAGAAATCACTaGAATGGAGTGCAAAGGATT +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLEARNH*NGVQRI
Trigger: AATCCTTTGCACTCCATTCCAGTGATTTCTTGCCTC...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGGAGGCAAGAAATCACTaGAATGGAGTGCAAAGGATT +
Preference number: 4 (lower is better)
Translates to: RTGERDCISSNTGSVAAPEARNH*NGVQRI
Trigger: AATCCTTTGCACTCCATTCCAGTGATTTCTTGCCTC...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATCAAGTGACCCCTTATTaGAGGCAAGAAATCACTGGA +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYQVTPY*RQEITG
Trigger: TCCAGTGATTTCTTGCCTCCAATAAGGGGTCACTTG...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCGTTTGGCGGATTCAGTaGCTTCCTGTCCCGATGTCC +
Preference number: 4 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSVWRIQ*LPVPMS
Trigger: GGACATCGGGACAGGAAGCCACTGAATCCGCCAAAC...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTAGACGGCTTTTAAGTTaGCCTCCACCTCCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPRRLLS*PPPPPQ
Trigger: TTGGGGAGGAGGTGGAGGCCAACTTAAAAGCCGTCT...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGTGGGCAGGGATGCTGTaGCAGAGTGCTGGTAGAATT +
Preference number: 4 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMWAGML*QSAGRI
Trigger: AATTCTACCAGCACTCTGCCACAGCATCCCTGCCCA...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGCCAGGGTCTCCTAGCTaGTTAGGACCACTGCTAGGG +
Preference number: 4 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKPGSPS*LGPLLG
Trigger: CCCTAGCAGTGGTCCTAACCAGCTAGGAGACCCTGG...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACTTGGGTAGAAGCTTGTaGCTTCCCCAGGGTCTCCTA +
Preference number: 4 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHLGRSL*LPQGLL
Trigger: TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAA...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACTTGCTGCAGCTCCCTTaGGTAGAAGCTTGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHLLQLP*VEACGF
Trigger: GAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAA...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTTTGCTGCAGCTCCCTTaGGTAGAAGCTTGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPLLQLP*VEACGF
Trigger: GAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAA...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGGCAAGTACTTGCCCTTaGCAACTGTGGGAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: IRLDSRTRLCILLRSIPEASTCP*QLWEGE
Trigger: CTCTCCTTCCCACAGTTGCCAAGGGCAAGTACTTGC...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCATGAAGGCACTTCCTTaGTTCTCTGTGCAGCAAGTA +
Preference number: 4 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPMKALP*FSVQQV
Trigger: TACTTGCTGCACAGAGAACCAAGGAAGTGCCTTCAT...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACAGGCTGTTGATGATATaGGTGGGTGATGAGTACTTG +
Preference number: 4 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDRLLMI*VGDEYL
Trigger: CAAGTACTCATCACCCACCCATATCATCAACAGCCT...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGTCTGTGAGAAATGGCTaGCCACAAGCCCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKSVRNG*PQALGQ
Trigger: CTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGA...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTTTCCTAAGGGGCACCTaGGGGTACTCAACCTTTGCT +
Preference number: 4 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPFLRGT*GYSTFA
Trigger: AGCAAAGGTTGAGTACCCCCAGGTGCCCCTTAGGAA...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGAAACTTAAACCCTGCTaGGGAATGCTAAACTCAAGT +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKKLKPC*GMLNSS
Trigger: ACTTGAGTTTAGCATTCCCCAGCAGGGTTTAAGTTT...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCCCCAGGACACCCTGCTaGCCAAGATTCTCCCATTGT +
Preference number: 4 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSPRTPC*PRFSHC
Trigger: ACAATGGGAGAATCTTGGCCAGCAGGGTGTCCTGGG...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR CCA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACTTTACAGCTATATCCTaGTTGAGTCTCCAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDFTAIS*LSLQLW
Trigger: CCACAGCTGGAGACTCAACCAGGATATAGCTGTAAA...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTCCAAATGGGTGGAAGTaGCCAGAAATGGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSPNGWK*PEMGPA
Trigger: AGCTGGGCCCATTTCTGGCCACTTCCACCCATTTGG...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTAGGTTCATTGAATAAGTaGCAGAACCAGGATTTGAAC +
Preference number: 4 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVGSLNK*QNQDLN
Trigger: GTTCAAATCCTGGTTCTGCCACTTATTCAATGAACC...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACATAATGGAGTGCCATTaGTATTCACCAGCTCATCAC +
Preference number: 4 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDIMECH*YSPAHH
Trigger: GTGATGAGCTGGTGAATATCAATGGCACTCCATTAT...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR TCA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTCTGAACTCACAGTTCTaGTGGCCCTCACTTGTCACT +
Preference number: 4 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPLNSQF*WPSLVT
Trigger: AGTGACAAGTGAGGGCCATCAGAACTGTGAGTTCAG...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR TCA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACATTCAGGAGGCTGACTaGACTCACAGTTCTGATGGC +
Preference number: 4 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHIQEAD*THSSDG
Trigger: GCCATCAGAACTGTGAGTTCAGTCAGCCTCCTGAAT...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR TCA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTCAGGAAACCTTTTTCTaGGGGGTGTCCATCAGCCTC +
Preference number: 4 (lower is better)
Translates to: RLDSRTRLCILLRSIPEIQETFF*GVSISL
Trigger: GAGGCTGATGGACACCCCTCAGAAAAAGGTTTCCTG...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp TCAACAAGTCAGTACTTCCCATGCTGTAATATGTTCATGAATCTCCTGGAAATCCAGTCCGTGGCTTGTTaGACAAGGGAGCCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: STSQYFPCCNMFMNLLEIQSVAC*TREPEA
Trigger: TGCCTCTGGCTCCCTTGTTCAACAAGCCACGGACTG...GATTTCCAGGAGATTCATGAACATATTACAGCATGGGAAGTACTGACTTGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR TCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGAGCTGCTTTAGTGGTTaGAGAACAGTCCGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMSCFSG*RTVRGL
Trigger: CAAGCCACGGACTGTTCTTCAACCACTAAAGCAGCT...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR TCA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGCATCATGCTTTTGTTaGAGAGCTTGTCTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHASCFC*RACLWG
Trigger: GCCCCAGAGACAAGCTCTTCAACAAAAGCATGATGC...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR TCA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGATTGGTCTGTGGCATaGTATGGTTGGTCTGCGGAA +
Preference number: 4 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHDWSVA*YGWSAE
Trigger: TTCCGCAGACCAACCATATCATGCCACAGACCAATC...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR TCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGATTATGATAGCAAACTaGACACCGAATGCATTGGTG +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLIMIAN*TPNALV
Trigger: CACCAATGCATTCGGTGTTCAGTTTGCTATCATAAT...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTTTTCAAAGCATGTTTaGAGTCTCCAAGGAGGTCAA +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLFSKHV*SLQGGQ
Trigger: TTGACCTCCTTGGAGACTTCAAACATGCTTTGAAAA...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCTTTGGGGCGCCAAGCTaGTGTGACTCTCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGFGAPS*CDSLRR
Trigger: CCTTCTCAGAGAGTCACATCAGCTTGGCGCCCCAAA...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGGAACCAGAGGTTTCTaGACTGAAATACTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHGTRGF*TEILGW
Trigger: CCACCCCAGTATTTCAGTTCAGAAACCTCTGGTTCC...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR TCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGAACTATGGCCTCCATTaGAAGCACTCCCCTACCTTC +
Preference number: 4 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMNYGLH*KHSPTF
Trigger: GAAGGTAGGGGAGTGCTTTCAATGGAGGCCATAGTT...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR TCA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGAACTATGGCCTCCATTaGAAGCACTCCCCTACCTTC +
Preference number: 4 (lower is better)
Translates to: IRLDSRTRLCILLRSIPENYGLH*KHSPTF
Trigger: GAAGGTAGGGGAGTGCTTTCAATGGAGGCCATAGTT...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTACACGTCACTTGTGTTaGAGCCAGAATGCCAGGACA +
Preference number: 4 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPTRHLC*SQNART
Trigger: TGTCCTGGCATTCTGGCTGCAACACAAGTGACGTGT...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR GCA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGTGCTTTTCTCGGTGCTaGAATGCCGGGAGAGTGGAC +
Preference number: 4 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKCFSRC*NAGRVD
Trigger: GTCCACTCTCCCGGCATTGCAGCACCGAGAAAAGCA...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGAGCTGCTTTTCTCGGTaGTGCAATGCCGGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKSCFSR*CNAGRV
Trigger: CACTCTCCCGGCATTGCAGCACCGAGAAAAGCAGCT...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCGTTGGCCCTGGGCCTTaGATGATGCAGTCTGTAGAG +
Preference number: 4 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGVGPGP*MMQSVE
Trigger: CTCTACAGACTGCATCATGCAAGGCCCAGGGCCAAC...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TCAACAAGTCAGTACTTCCCATGCTGTAATATGTTCATGAATCTCCTGGAAATCGACCACAGGCTCAGATaGCCTGCGCTGCTCTCCATT +
Preference number: 4 (lower is better)
Translates to: STSQYFPCCNMFMNLLEIDHRLR*PALLSI
Trigger: AATGGAGAGCAGCGCAGGGCATCTGAGCCTGTGGTC...GATTTCCAGGAGATTCATGAACATATTACAGCATGGGAAGTACTGACTTGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR GCA 90 bp ATGAAACATATCAGCCTCATCCTCCCAATACAGGACATCTCAATTTGCTCATTGGCCTGCATCAGTAGATaGTCAGAGCCCTGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: MKHISLILPIQDISICSLACISR*SEPCWL
Trigger: CAGCCAACAGGGCTCTGAGCATCTACTGATGCAGGC...CAATGAGCAAATTGAGATGTCCTGTATTGGGAGGATGAGGCTGATATGTTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCTCTTCCCTTTGTGGCTaGTGTGCAAAGGGGACAGAG +
Preference number: 4 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSSSLCG*CAKGTE
Trigger: CTCTGTCCCCTTTGCACAGCAGCCACAAAGGGAAGA...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR GCA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCTGGGTTTCCAAGTGTTaGCAGGTGCCAAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSWVSKC*QVPSCC
Trigger: ACAGCAGCTTGGCACCTGGCAACACTTGGAAACCCA...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR GCA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTTGGGTTTCCAAGTGTTaGCAGGTGCCAAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSWVSKC*QVPSCC
Trigger: ACAGCAGCTTGGCACCTGGCAACACTTGGAAACCCA...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTCTTCTGCTGCTGGGCTaGACGAAAGAGCCTGTACTT +
Preference number: 4 (lower is better)
Translates to: RLDSRTRLCILLRSIPEILLLLG*TKEPVL
Trigger: AAGTACAGGCTCTTTCGTGCAGCCCAGCAGCAGAAG...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTTCCAAAGCCCACCAATaGCATAGTAGCAAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSSKAHQ*HSSKGA
Trigger: AGCCCCCTTGCTACTATGGCATTGGTGGGCTTTGGA...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCTGCCCCGTCAGCTGCTaGTTCTTCTCTATCAGTACC +
Preference number: 4 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSCPVSC*FFSIST
Trigger: GGTACTGATAGAGAAGAAGCAGCAGCTGACGGGGCA...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR GCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATCTGATCTGCAGAAAATaGTTTCCTTCTGGGCTAACT +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYLICRK*FPSGLT
Trigger: AGTTAGCCCAGAAGGAAAGCATTTTCTGCAGATCAG...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTGTGGTCTCAGCTCACTaGAATCTCTGCCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RLDSRTRLCILLRSIPEIVVSAH*NLCLPG
Trigger: ACCTGGAAGGCAGAGATTGCAGTGAGCTGAGACCAC...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR GCA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTGGCTGGGTCTTCAATTaGTCTGGGGAGCTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LGDGREMTEPFSISGDFFGWVFN*SGELAL
Trigger: CAGAGCCAGCTCCCCAGAGCAATTGAAGACCCAGCC...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp ATGAAACATATCAGCCTCATCCTCCCAATACAGGACATCTCAATTTGCTCATTGTACCCCAGGACACCCTaGTGGCCAAGATTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: MKHISLILPIQDISICSLYPRTP*WPRFSH
Trigger: ATGGGAGAATCTTGGCCAGCAGGGTGTCCTGGGGTA...CAATGAGCAAATTGAGATGTCCTGTATTGGGAGGATGAGGCTGATATGTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TCAACAAGTCAGTACTTCCCATGCTGTAATATGTTCATGAATCTCCTGGAAATCCCTCCATCTGGGGCTTaGTACTGGCAGAGCAGCACT +
Preference number: 4 (lower is better)
Translates to: STSQYFPCCNMFMNLLEIPPSGA*YWQSST
Trigger: AGTGCTGCTCTGCCAGTAGCAAGCCCCAGATGGAGG...GATTTCCAGGAGATTCATGAACATATTACAGCATGGGAAGTACTGACTTGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR GCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCAGGCTATGGCAGATCCTaGTATTTAACTGGGGATGAT +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAAGYGRS*YLTGDD
Trigger: ATCATCCCCAGTTAAATAGCAGGATCTGCCATAGCC...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACAGAATGAGGGCCTCTTaGCGGGAGCCATATAATGGA +
Preference number: 4 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHRMRAS*REPYNG
Trigger: TCCATTATATGGCTCCCGCCAAGAGGCCCTCATTCT...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCGGAAATGCATGGTGGTaGCTGCTTCAGGGCATCCCT +
Preference number: 4 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGGNAWW*LLQGIP
Trigger: AGGGATGCCCTGAAGCAGCCACCACCATGCATTTCC...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGGATGGCTCTCATAGGTaGCTTGGCCTGGTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKDGSHR*LGLVAP
Trigger: TGGAGCAACCAGGCCAAGCCACCTATGAGAGCCATC...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTCCTCACTGGAGGTTGTaGTGGGCCCCTGACTGCTTT +
Preference number: 4 (lower is better)
Translates to: LGDGREMTEPFSISGDFFPHWRL*WAPDCF
Trigger: AAAGCAGTCAGGGGCCCACCACAACCTCCAGTGAGG...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTCCCTCACTTGTCACTTaGTCATGCCCACTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: RLDSRTRLCILLRSIPEIPSLVT*SCPLRQ
Trigger: TTGCCTCAGTGGGCATGACCAAGTGACAAGTGAGGG...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCATCAGCCTCTCCATGTaGGGGACTGCTTTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGISLSM*GTALAL
Trigger: CAGAGCCAAAGCAGTCCCCCACATGGAGAGGCTGAT...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATTCTGCTTGTTCTGTTTaGGTCCAGGAAACCTTTTTC +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYSACSV*VQETFF
Trigger: GAAAAAGGTTTCCTGGACCCAAACAGAACAAGCAGA...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGGGTTGGCCAATTCACTaGCTGCTCTGCTTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMGWPIH*LLCLFC
Trigger: ACAGAACAAGCAGAGCAGCCAGTGAATTGGCCAACC...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCATAGGTTTTGGTCTCTaGGTAAAAGTCTTGTTGCTA +
Preference number: 4 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVIGFGL*VKVLLL
Trigger: TAGCAACAAGACTTTTACCCAGAGACCAAAACCTAT...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGATATGATTGGTCCATaGGATGGCGCCTCAATTCCC +
Preference number: 4 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHDMIGP*DGASIP
Trigger: GGGAATTGAGGCGCCATCCCATGGACCAATCATATC...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGGATATGATTGGTCCATaGGATGGCGCCTCAATTCCC +
Preference number: 4 (lower is better)
Translates to: IRLDSRTRLCILLRSIPEDMIGP*DGASIP
Trigger: GGGAATTGAGGCGCCATCCCATGGACCAATCATATC...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TCAACAAGTCAGTACTTCCCATGCTGTAATATGTTCATGAATCTCCTGGAAATCGAACACCGAATGCATTaGTGGTGGTGGCACCGGCAG +
Preference number: 4 (lower is better)
Translates to: STSQYFPCCNMFMNLLEIEHRMH*WWWHRQ
Trigger: CTGCCGGTGCCACCACCACCAATGCATTCGGTGTTC...GATTTCCAGGAGATTCATGAACATATTACAGCATGGGAAGTACTGACTTGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR CCA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCCCCTCCCTGACTGGCTaGTCTTCCTGTTTCCTGTTA +
Preference number: 4 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSPSLTG*SSCFLL
Trigger: TAACAGGAAACAGGAAGACCAGCCAGTCAGGGAGGG...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGCCGAGAAGATCCGACTaGGTCTCATCACCTTTGCTA +
Preference number: 4 (lower is better)
Translates to: IRLDSRTRLCILLRSIPEPRRSD*VSSPLL
Trigger: TAGCAAAGGTGATGAGACCCAGTCGGATCTTCTCGG...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTGAAAGGCCTTCTTCCTaGCTCCGAGAAGATCCGACT +
Preference number: 4 (lower is better)
Translates to: RLDSRTRLCILLRSIPEIERPSS*LREDPT
Trigger: AGTCGGATCTTCTCGGAGCCAGGAAGAAGGCCTTTC...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGGTTTGGCGGATTCAGTaGCTTCCTGTCCCGATGTCC +
Preference number: 4 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKVWRIQ*LPVPMS
Trigger: GGACATCGGGACAGGAAGCCACTGAATCCGCCAAAC...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCAAGAATTAGAAATTGCTaGGCCCCAGGAGTAGACTCT +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAARIRNC*APGVDS
Trigger: AGAGTCTACTCCTGGGGCCCAGCAATTTCTAATTCT...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACCCTTGGCAAATTCTTTaGTTGAATGAGACATCCCTG +
Preference number: 4 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDPWQIL*LNETSL
Trigger: CAGGGATGTCTCATTCAACCAAAGAATTTGCCAAGG...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTCACTGGAGGGGAGAATaGCAGGGTTGCCATTCTAAC +
Preference number: 4 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSHWRGE*QGCHSN
Trigger: GTTAGAATGGCAACCCTGCCATTCTCCCCTCCAGTG...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGAGTAGAATCTTCCACTaGAGGGGAGAATGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: IRLDSRTRLCILLRSIPESRIFH*RGEWQG
Trigger: ACCCTGCCATTCTCCCCTCCAGTGGAAGATTCTACT...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp ATGAAACATATCAGCCTCATCCTCCCAATACAGGACATCTCAATTTGCTCATTGCCAAATGGGTGGAAGTaGCCAGAAATGGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: MKHISLILPIQDISICSLPNGWK*PEMGPA
Trigger: AGCTGGGCCCATTTCTGGCCACTTCCACCCATTTGG...CAATGAGCAAATTGAGATGTCCTGTATTGGGAGGATGAGGCTGATATGTTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTTGCAGAAATATTATTaGCATAGACGACTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLLQKYY*HRRLLW
Trigger: CCAGAGGAGTCGTCTATGCCAATAATATTTCTGCAA...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGAACAGAAATAACCAATaGCTTAAACTCTGTACCCCC +
Preference number: 4 (lower is better)
Translates to: RTGERDCISSNTGSVAAPNRNNQ*LKLCTP
Trigger: GGGGGTACAGAGTTTAAGCCATTGGTTATTTCTGTT...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR CAA 72 bp ATTCTTTGGTTGAATGAGACATCCCTGCTGCTACAGTaGACCTTCAAGGACCCTGAGGAACTCAGCAGTAAC +
Preference number: 4 (lower is better)
Translates to: ILWLNETSLLLQ*TFKDPEELSSN
Trigger: GTTACTGCTGAGTTCCTCAGGGTCCTTGAAGGTCAACTGTAGCAGCAGGGATGTCTCATTCAACCAAAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCAATAATGGAGTGCCATTaGTATTCACCAGCTCATCAC +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAAIMECH*YSPAHH
Trigger: GTGATGAGCTGGTGAATATCAATGGCACTCCATTAT...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR TCA 90 bp TCAACAAGTCAGTACTTCCCATGCTGTAATATGTTCATGAATCTCCTGGAAATCGAAGGAGCTGTAGGCTaGGTCACGCTGGTTAGGGTA +
Preference number: 4 (lower is better)
Translates to: STSQYFPCCNMFMNLLEIEGAVG*VTLVRV
Trigger: TACCCTAACCAGCGTGACTCAGCCTACAGCTCCTTC...GATTTCCAGGAGATTCATGAACATATTACAGCATGGGAAGTACTGACTTGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR TCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCCAGGAAACCTTTTTCTaGGGGGTGTCCATCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGQETFF*GVSISL
Trigger: GAGGCTGATGGACACCCCTCAGAAAAAGGTTTCCTG...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTGATTGGTCTGTGGCATaGTATGGTTGGTCTGCGGAA +
Preference number: 4 (lower is better)
Translates to: RLDSRTRLCILLRSIPEIDWSVA*YGWSAE
Trigger: TTCCGCAGACCAACCATATCATGCCACAGACCAATC...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTCAGAGGTTTCTGAACTaGAATACTGGGGTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: RLDSRTRLCILLRSIPEIQRFLN*NTGVAA
Trigger: AGCTGCCACCCCAGTATTTCAGTTCAGAAACCTCTG...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCGGAGGCGAAAAGTGCTaGAACTCTTGTTTGGCGGAT +
Preference number: 4 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSGGEKC*NSCLAD
Trigger: ATCCGCCAAACAAGAGTTTCAGCACTTTTCGCCTCC...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR TCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGAATATTGTAATAAGCTaGGTAAGAGGTAGGGATTCC +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLNIVIS*VRGRDS
Trigger: GGAATCCCTACCTCTTACTCAGCTTATTACAATATT...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTGGGCAGAATTGGCATTaGTGTCCTCTAGCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LGDGREMTEPFSISGDFFGQNWH*CPLAAL
Trigger: GAGGGCTGCTAGAGGACATCAATGCCAATTCTGCCC...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAATTGCTATCTACTTGCTaGGAAACTGCTAACAAAGAA +
Preference number: 4 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQLLSTC*ETANKE
Trigger: TTCTTTGTTAGCAGTTTCTCAGCAAGTAGATAGCAA...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGTTCACATGGGATAGATaGCCCCCAACAGCTGTACAA +
Preference number: 4 (lower is better)
Translates to: IRLDSRTRLCILLRSIPEFTWDR*PPTAVQ
Trigger: TTGTACAGCTGTTGGGGGTCATCTATCCCATGTGAA...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGCCTTTTATTGAAATATaGCCCTTGATGACAATCTGG +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLPFIEI*PLMTIW
Trigger: CCAGATTGTCATCAAGGGTCATATTTCAATAAAAGG...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGCTTAGCACCTTTTATTaGAATATGACCCTTGATGAC +
Preference number: 4 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLLSTFY*NMTLDD
Trigger: GTCATCAAGGGTCATATTTCAATAAAAGGTGCTAAG...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGACTGAAGGCAAGGTATaGCCATCAGCCTGGATGGAC +
Preference number: 4 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKTEGKV*PSAWMD
Trigger: GTCCATCCAGGCTGATGGTCATACCTTGCCTTCAGT...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460112.3
CDS-3UTR GCA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACCTTCTGGGACAAAGCTaGCTTGCCTCCATCTTCAAT +
Preference number: 4 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHLLGQS*LASIFN
Trigger: ATTGAAGATGGAGGCAAGGCAGCTTTGTCCCAGAAG...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR GCA 90 bp ATGAAACATATCAGCCTCATCCTCCCAATACAGGACATCTCAATTTGCTCATTGGTGTTGCAGCCAGAATaGCAGGACAAGCTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: MKHISLILPIQDISICSLVLQPE*QDKLKA
Trigger: AGCCTTCAGCTTGTCCTGGCATTCTGGCTGCAACAC...CAATGAGCAAATTGAGATGTCCTGTATTGGGAGGATGAGGCTGATATGTTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTACACGTCACTTGTGTTaGAGCCAGAATGCCAGGACA +
Preference number: 4 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSTRHLC*SQNART
Trigger: TGTCCTGGCATTCTGGCTGCAACACAAGTGACGTGT...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGGAGAGTGGACACCACTaGACACACACGTCACTTGTG +
Preference number: 4 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKESGHH*THTSLV
Trigger: CACAAGTGACGTGTGTGTGCAGTGGTGTCCACTCTC...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCCCAGGCTCTCCATGCTaGCAATGGAGCTGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGPGSPC*QWSCFS
Trigger: AGAAAAGCAGCTCCATTGGCAGCATGGAGAGCCTGG...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp ATGAAACATATCAGCCTCATCCTCCCAATACAGGACATCTCAATTTGCTCATTGGAGCTCCTTGAACACTaGAGGAGTAAGAGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: MKHISLILPIQDISICSLELLEH*RSKSRS
Trigger: GGACCTGCTCTTACTCCTGCAGTGTTCAAGGAGCTC...CAATGAGCAAATTGAGATGTCCTGTATTGGGAGGATGAGGCTGATATGTTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCACCCCAGAACAATAAATaGAAGGATCATGGACTAGAG +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAAPQNNK*KDHGLE
Trigger: CTCTAGTCCATGATCCTTGCATTTATTGTTCTGGGG...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp ATGAAACATATCAGCCTCATCCTCCCAATACAGGACATCTCAATTTGCTCATTGTCCCCAGGAAATTCCTaGACTGTCAGCTTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: MKHISLILPIQDISICSLSPGNS*TVSFLG
Trigger: ACCCAGGAAGCTGACAGTGCAGGAATTTCCTGGGGA...CAATGAGCAAATTGAGATGTCCTGTATTGGGAGGATGAGGCTGATATGTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp ATGAAACATATCAGCCTCATCCTCCCAATACAGGACATCTCAATTTGCTCATTGTCCTGTTGCTTCTGCTaGTGCTGTTGCTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: MKHISLILPIQDISICSLSCCFC*CCCCFC
Trigger: GCAGAAGCAGCAACAGCAGCAGCAGAAGCAACAGGA...CAATGAGCAAATTGAGATGTCCTGTATTGGGAGGATGAGGCTGATATGTTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTCTGAGACATTTGAGTTaGTCTTCCCCGAGCTTGATC +
Preference number: 4 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPLRHLS*SSPSLI
Trigger: GATCAAGCTCGGGGAAGAGCAACTCAAATGTCTCAG...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR GCA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGGGTAGAATTAGAAATTaGTGGGCCCCAGGAGTAGAC +
Preference number: 4 (lower is better)
Translates to: IRLDSRTRLCILLRSIPEGRIRN*WAPGVD
Trigger: GTCTACTCCTGGGGCCCAGCAATTTCTAATTCTACC...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATGAAAAACTTAAACCCTaGTGGGGAATGCTAAACTCA +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYEKLKP*WGMLNS
Trigger: TGAGTTTAGCATTCCCCAGCAGGGTTTAAGTTTTTC...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACACAGGGGAGAGAGACTaGATCTCAAGTAATACTGGC +
Preference number: 4 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHTGERD*ISSNTG
Trigger: GCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGT...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR GCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATTGTGATAGTAACTCATaGACTGACTTCTCTATCAGC +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYCDSNS*TDFSIS
Trigger: GCTGATAGAGAAGTCAGTGCATGAGTTACTATCACA...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TCAACAAGTCAGTACTTCCCATGCTGTAATATGTTCATGAATCTCCTGGAAATCGATGTGGCTCTGGTGTaGCTGGGCAGCTTTATGGCA +
Preference number: 4 (lower is better)
Translates to: STSQYFPCCNMFMNLLEIDVALV*LGSFMA
Trigger: TGCCATAAAGCTGCCCAGGCACACCAGAGCCACATC...GATTTCCAGGAGATTCATGAACATATTACAGCATGGGAAGTACTGACTTGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR GCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATCTAGACTCTGTATACTaGTTAGGTCTATACCTGAGA +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYLDSVY*LGLYLR
Trigger: TCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAG...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGCTTTCTTTGCTGGACTaGTCATGGGTTCCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: IRLDSRTRLCILLRSIPELSLLD*SWVPPV
Trigger: TACAGGAGGAACCCATGACCAGTCCAGCAAAGAAAG...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTGGACTGCTTTGGCTCTaGTGTCCCAAAACTAAAGAC +
Preference number: 4 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPGLLWL*CPKTKD
Trigger: GTCTTTAGTTTTGGGACACCAGAGCCAAAGCAGTCC...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp ATGAAACATATCAGCCTCATCCTCCCAATACAGGACATCTCAATTTGCTCATTGCTGGGTCTCTTCCACTaGCTCCTTAGTGTCACACAG +
Preference number: 4 (lower is better)
Translates to: MKHISLILPIQDISICSLLGLFH*LLSVTQ
Trigger: CTGTGTGACACTAAGGAGCCAGTGGAAGAGACCCAG...CAATGAGCAAATTGAGATGTCCTGTATTGGGAGGATGAGGCTGATATGTTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TCAACAAGTCAGTACTTCCCATGCTGTAATATGTTCATGAATCTCCTGGAAATCGTTAGAGGCAGTGAGTaGAGGACTTTCTGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: STSQYFPCCNMFMNLLEIVRGSE*RTFWGL
Trigger: GAGCCCCCAGAAAGTCCTCCACTCACTGCCTCTAAC...GATTTCCAGGAGATTCATGAACATATTACAGCATGGGAAGTACTGACTTGTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR CCA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAATTGGTCTATAGGTTTTaGTCTCTGGGTAAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQLVYRF*SLGKSL
Trigger: AAGACTTTTACCCAGAGACCAAAACCTATAGACCAA...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACTCAATTCCCTACAGCTaGAGCTCATTGGCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHSIPYS*SSLAGS
Trigger: ACTTCCAGCCAATGAGCTCCAGCTGTAGGGAATTGA...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGTCAATTCCCTACAGCTaGAGCTCATTGGCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: IRLDSRTRLCILLRSIPESIPYS*SSLAGS
Trigger: ACTTCCAGCCAATGAGCTCCAGCTGTAGGGAATTGA...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCAACTGAAGGGGTGACATaGAATGATATGATTGGTCTG +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAATEGVT*NDMIGL
Trigger: CAGACCAATCATATCATTCCATGTCACCCCTTCAGT...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGCCCTCCCTGACTGGCTaGTCTTCCTGTTTCCTGTTA +
Preference number: 4 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKPSLTG*SSCFLL
Trigger: TAACAGGAAACAGGAAGACCAGCCAGTCAGGGAGGG...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTCCGAGAAGATCCGACTaGGTCTCATCACCTTTGCTA +
Preference number: 4 (lower is better)
Translates to: RLDSRTRLCILLRSIPEIPRRSD*VSSPLL
Trigger: TAGCAAAGGTGATGAGACCCAGTCGGATCTTCTCGG...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCACTGAAATACTGGGGTaGCAGCTCCTCTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGTEILG*QLLFLL
Trigger: GAGGAGGAAGAGGAGCTGCCACCCCAGTATTTCAGT...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATAAGAAATCACTGGAATaGAGTGCAAAGGATTCTTGC +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYKKSLE*SAKDSC
Trigger: GCAAGAATCCTTTGCACTCCATTCCAGTGATTTCTT...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGTCCCCAACAAACAAGTaGTACTTTTCAAATTCATTG +
Preference number: 4 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKSPTNK*YFSNSL
Trigger: CAATGAATTTGAAAAGTACCACTTGTTTGTTGGGGA...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTCCAACTTCTCCTGGTTaGCCTCTGAATCGATGCTGT +
Preference number: 4 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSPTSPG*PLNRCC
Trigger: ACAGCATCGATTCAGAGGCCAACCAGGAGAAGTTGG...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCAAAAATGCTTTCCTTCTaGGCTAACTTTTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAAKMLSF*ANFSLS
Trigger: GGAGAGGGAAAAGTTAGCCCAGAAGGAAAGCATTTT...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGGTATGCCTAAGATCCTaGCTGGGTCTTCAATTGCTC +
Preference number: 4 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMVCLRS*LGLQLL
Trigger: GAGCAATTGAAGACCCAGCCAGGATCTTAGGCATAC...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR CCA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTACTGATAACTGTCTTTaGGGATCTCCCTTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSTDNCL*GSPLAC
Trigger: GCAGGCCAAGGGAGATCCCCAAAGACAGTTATCAGT...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCCTGTCAGATTCTACTTaGGCATTTACAGCTATATCC +
Preference number: 4 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPLSDST*AFTAIS
Trigger: GGATATAGCTGTAAATGCCCAAGTAGAATCTGACAG...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTAAAGCTCCAAATGGGTaGAAGTGGCCAGAAATGGGC +
Preference number: 4 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSKAPNG*KWPEMG
Trigger: GCCCATTTCTGGCCACTTCCACCCATTTGGAGCTTT...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCCAGCCAAGAAGGGAGTaGTGGAGGACACAAATGCAG +
Preference number: 4 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGQPRRE*WRTQMQ
Trigger: CTGCATTTGTGTCCTCCACCACTCCCTTCTTGGCTG...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCATCTGTGAAGGACTATaGATAGGTGACCAAATTCCT +
Preference number: 4 (lower is better)
Translates to: LVRNRELSWITGQHLAITICEGL*IGDQIP
Trigger: AGGAATTTGGTCACCTATCCATAGTCCTTCACAGAT...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATACTGGGGATGATGAATaGTATAGCATCAATACCATC +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYTGDDE*YSINTI
Trigger: GATGGTATTGATGCTATACCATTCATCATCCCCAGT...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCCTGAACTCACAGTTCTaGTGGCCCTCACTTGTCACT +
Preference number: 4 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGLNSQF*WPSLVT
Trigger: AGTGACAAGTGAGGGCCATCAGAACTGTGAGTTCAG...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATGTTAAACCTGGCAAATaGGATGTAGATAAGGATTTG +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYVKPGK*DVDKDL
Trigger: CAAATCCTTATCTACATCTCATTTGCCAGGTTTAAC...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCAAAAGTCTTGTTGCTATaGGTGGTTAAACCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAAKVLLL*VVKPGK
Trigger: TTTGCCAGGTTTAACCACTCATAGCAACAAGACTTT...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp ATGAAACATATCAGCCTCATCCTCCCAATACAGGACATCTCAATTTGCTCATTGCAGAGGTTTCTGAACTaGAATACTGGGGTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: MKHISLILPIQDISICSLQRFLN*NTGVAA
Trigger: AGCTGCCACCCCAGTATTTCAGTTCAGAAACCTCTG...CAATGAGCAAATTGAGATGTCCTGTATTGGGAGGATGAGGCTGATATGTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGCTAACAAAGAAGATTaGAAGCACTTCCCACATGGC +
Preference number: 4 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHANKED*KHFPHG
Trigger: GCCATGTGGGAAGTGCTTTCAATCTTCTTTGTTAGC...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR TCA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTACAGTAGGGAGGCTCTaGGTTCAAGGGGAAAACTCC +
Preference number: 4 (lower is better)
Translates to: LGDGREMTEPFSISGDFFTVGRL*VQGENS
Trigger: GGAGTTTTCCCCTTGAACTCAGAGCCTCCCTACTGT...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCTACTCAGGATGGTCTTaGAATAGATGTCTAAAAGCT +
Preference number: 4 (lower is better)
Translates to: LVRNRELSWITGQHLAITYSGWS*NRCLKA
Trigger: AGCTTTTAGACATCTATTTCAAGACCATCCTGAGTA...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGGTAGCCCAGGTTCATTaGATAAGTGGCAGAACCAGG +
Preference number: 4 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKVAQVH*ISGRTR
Trigger: CCTGGTTCTGCCACTTATTCAATGAACCTGGGCTAC...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TCAACAAGTCAGTACTTCCCATGCTGTAATATGTTCATGAATCTCCTGGAAATCCCAGGCTCTCCATGCTaGCAATGGAGCTGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: STSQYFPCCNMFMNLLEIPGSPC*QWSCFS
Trigger: AGAAAAGCAGCTCCATTGGCAGCATGGAGAGCCTGG...GATTTCCAGGAGATTCATGAACATATTACAGCATGGGAAGTACTGACTTGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR GCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGTGGTCTTTCTTTCTTTaGTGGACTGGTCATGGGTTC +
Preference number: 4 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMWSFFL*WTGHGF
Trigger: GAACCCATGACCAGTCCAGCAAAGAAAGAAAGACCA...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR GCA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTTGGTCTTTCTTTCTTTaGTGGACTGGTCATGGGTTC +
Preference number: 4 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPWSFFL*WTGHGF
Trigger: GAACCCATGACCAGTCCAGCAAAGAAAGAAAGACCA...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR GCA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATCAAATTCATTGGATTTaGAGACGGCTTTTAAGTTGG +
Preference number: 4 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYQIHWI*RRLLSW
Trigger: CCAACTTAAAAGCCGTCTGCAAATCCAATGAATTTG...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCTGGCCTCTGAATCGATaGTGTTCAGAGCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSWPLNR*CSEHSP
Trigger: TGGAGAATGCTCTGAACAGCATCGATTCAGAGGCCA...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR GCA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGTGTGCAGCAAGTACTTaGCCTTGGCAACTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKCAAST*PWQLWE
Trigger: TTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACA...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCTTCCTTGGTTCTCTGTaGAGCAAGTACTTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSFLGSL*SKYLPL
Trigger: CAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAA...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGGGGATCCAACAGCTTTaGTTGAGGCCTGCATCAGTA +
Preference number: 4 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKGIQQL*LRPASV
Trigger: TACTGATGCAGGCCTCAACCAAAGCTGTTGGATCCC...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCCTTTTCTTCCCTTTGTaGCTGCTGTGCAAAGGGGAC +
Preference number: 4 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGLFFPL*LLCKGD
Trigger: GTCCCCTTTGCACAGCAGCCACAAAGGGAAGAAAAG...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCTTGAAGAACAGTCCGTaGCTTGTTGAACAAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSLKNSP*LVEQGS
Trigger: GCTCCCTTGTTCAACAAGCCACGGACTGTTCTTCAA...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGTTCCTTGTTGTCACCTaGGTTGGAAGGGCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKFLVVT*VGRAFH
Trigger: ATGGAAGGCCCTTCCAACCCAGGTGACAACAAGGAA...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCATCTTGTTGCTATGAGTaGTTAAACCTGGCAAATGAG +
Preference number: 4 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAASCCYE*LNLANE
Trigger: CTCATTTGCCAGGTTTAACCACTCATAGCAACAAGA...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTGTTTCCTGTTATTaGATTCCATTTGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMPVSCY*IPFVPR
Trigger: CCTGGGGACAAATGGAATCCAATAACAGGAAACAGG...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCAAGTGACCCCTTATTaGAGGCAAGAAATCACTGGA +
Preference number: 4 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMQVTPY*RQEITG
Trigger: TCCAGTGATTTCTTGCCTCCAATAAGGGGTCACTTG...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGCAAGTGACCCCTTATTaGAGGCAAGAAATCACTGGA +
Preference number: 4 (lower is better)
Translates to: IRLDSRTRLCILLRSIPEQVTPY*RQEITG
Trigger: TCCAGTGATTTCTTGCCTCCAATAAGGGGTCACTTG...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTGCTGAAACTCTTGTTTaGCGGATTCAGTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: RLDSRTRLCILLRSIPEIAETLV*RIQWLP
Trigger: AGGAAGCCACTGAATCCGCCAAACAAGAGTTTCAGC...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACATGAAGGCACTTCCTTaGTTCTCTGTGCAGCAAGTA +
Preference number: 4 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHMKALP*FSVQQV
Trigger: TACTTGCTGCACAGAGAACCAAGGAAGTGCCTTCAT...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACCTGTACAACCAACACTaGTTCTTCATCTATAGAAAC +
Preference number: 4 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDLYNQH*FFIYRN
Trigger: GTTTCTATAGATGAAGAACCAGTGTTGGTTGTACAG...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
3UTR CAA 72 bp TCAGATTCTACTTGGGCATTTACAGCTATATCCTGGTaGAGTCTCCAGCTGTGGGACTCAGGAAGATTCAAT +
Preference number: 4 (lower is better)
Translates to: SDSTWAFTAISW*SLQLWDSGRFN
Trigger: ATTGAATCTTCCTGAGTCCCACAGCTGGAGACTCAACCAGGATATAGCTGTAAATGCCCAAGTAGAATCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTGGAGGCGAAAAGTGCTaGAACTCTTGTTTGGCGGAT +
Preference number: 4 (lower is better)
Translates to: LGDGREMTEPFSISGDFFGGEKC*NSCLAD
Trigger: ATCCGCCAAACAAGAGTTTCAGCACTTTTCGCCTCC...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTGCTTTGGTTGAGGCCTaGATCAGTAGATGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: LGDGREMTEPFSISGDFFALVEA*ISRCSE
Trigger: CTCTGAGCATCTACTGATGCAGGCCTCAACCAAAGC...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCTGGCCTCTGAATCGATaGTGTTCAGAGCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGWPLNR*CSEHSP
Trigger: TGGAGAATGCTCTGAACAGCATCGATTCAGAGGCCA...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGCTGAGACATTTGAGTTaGTCTTCCCCGAGCTTGATC +
Preference number: 4 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKLRHLS*SSPSLI
Trigger: GATCAAGCTCGGGGAAGAGCAACTCAAATGTCTCAG...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCGGAGAATGGCAGGGTTaGCATTCTAACAGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSGEWQG*HSNSVS
Trigger: AGAAACACTGTTAGAATGGCAACCCTGCCATTCTCC...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR GCA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGGTTTGTCCTAGAGCCTaGTCAGAAGAAAAGATGACA +
Preference number: 4 (lower is better)
Translates to: IRLDSRTRLCILLRSIPEVCPRA*SEEKMT
Trigger: TGTCATCTTTTCTTCTGAGCAGGCTCTAGGACAAAC...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGTTAGGGTACATGTTCTaGTCAATAGGCAACAGATGG +
Preference number: 4 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMLGYMF*SIGNRW
Trigger: CCATCTGTTGCCTATTGACCAGAACATGTACCCTAA...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTAGAAGCCTCATTGAGTaGGTTGGAATCCACGCTGGA +
Preference number: 4 (lower is better)
Translates to: LGDGREMTEPFSISGDFFRSLIE*VGIHAG
Trigger: TCCAGCGTGGATTCCAACCCACTCAATGAGGCTTCT...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp ATGAAACATATCAGCCTCATCCTCCCAATACAGGACATCTCAATTTGCTCATTGCTTTCTTTGCTGGACTaGTCATGGGTTCCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: MKHISLILPIQDISICSLLSLLD*SWVPPV
Trigger: TACAGGAGGAACCCATGACCAGTCCAGCAAAGAAAG...CAATGAGCAAATTGAGATGTCCTGTATTGGGAGGATGAGGCTGATATGTTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTTCTTTCTTTCTTTGCTaGACTGGTCATGGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: RLDSRTRLCILLRSIPEISFFLC*TGHGFL
Trigger: GAGGAACCCATGACCAGTCCAGCAAAGAAAGAAAGA...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCGGACTGCTTTGGCTCTaGTGTCCCAAAACTAAAGAC +
Preference number: 4 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGGLLWL*CPKTKD
Trigger: GTCTTTAGTTTTGGGACACCAGAGCCAAAGCAGTCC...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTGGTTGGCCAATTCACTaGCTGCTCTGCTTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: LGDGREMTEPFSISGDFFGWPIH*LLCLFC
Trigger: ACAGAACAAGCAGAGCAGCCAGTGAATTGGCCAACC...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTACAGCTGGAGCTCATTaGCTGGAAGTTTTGGTCTAT +
Preference number: 4 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSTAGAH*LEVLVY
Trigger: ATAGACCAAAACTTCCAGCCAATGAGCTCCAGCTGT...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp ATGAAACATATCAGCCTCATCCTCCCAATACAGGACATCTCAATTTGCTCATTGTCAATTCCCTACAGCTaGAGCTCATTGGCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: MKHISLILPIQDISICSLSIPYS*SSLAGS
Trigger: ACTTCCAGCCAATGAGCTCCAGCTGTAGGGAATTGA...CAATGAGCAAATTGAGATGTCCTGTATTGGGAGGATGAGGCTGATATGTTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACAACATTCTGAGTAAGTaGGAGTTTCTGACTGAAGGG +
Preference number: 4 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHNILSK*EFLTEG
Trigger: CCCTTCAGTCAGAAACTCCCACTTACTCAGAATGTT...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGTTCTCAAGGCAAGGATaGAAAGGGGTTGCCCATGAA +
Preference number: 4 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKFSRQG*KGVAHE
Trigger: TTCATGGGCAACCCCTTTCCATCCTTGCCTTGAGAA...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCAGTACCAACTTCTCCTaGTTGGCCTCTGAATCGATG +
Preference number: 4 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGSTNFS*LASESM
Trigger: CATCGATTCAGAGGCCAACCAGGAGAAGTTGGTACT...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp ATGAAACATATCAGCCTCATCCTCCCAATACAGGACATCTCAATTTGCTCATTGATAGAAACTAGCTACTaGTGTCAGGGCCTTGGCAAC +
Preference number: 4 (lower is better)
Translates to: MKHISLILPIQDISICSLIETSY*CQGLGN
Trigger: GTTGCCAAGGCCCTGACACCAGTAGCTAGTTTCTAT...CAATGAGCAAATTGAGATGTCCTGTATTGGGAGGATGAGGCTGATATGTTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCAACAGGGAGCTAAGCTaGATAACAGGGCAGCATTTG +
Preference number: 4 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGNRELS*ITGQHL
Trigger: CAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTT...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGCCTTGGCAAATTCTTTaGTTGAATGAGACATCCCTG +
Preference number: 4 (lower is better)
Translates to: IRLDSRTRLCILLRSIPEPWQIL*LNETSL
Trigger: CAGGGATGTCTCATTCAACCAAAGAATTTGCCAAGG...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACATTATGATAGCAAACTaGACACCGAATGCATTGGTG +
Preference number: 4 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHIMIAN*TPNALV
Trigger: CACCAATGCATTCGGTGTTCAGTTTGCTATCATAAT...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR TCA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTAGGATAGTTGGAATGTaGACAGAATATGGATCACGA +
Preference number: 4 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPRIVGM*TEYGSR
Trigger: TCGTGATCCATATTCTGTTCACATTCCAACTATCCT...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR GCA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTTTCCTTGGTTCTCTGTaGAGCAAGTACTTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: LGDGREMTEPFSISGDFFFLGSL*SKYLPL
Trigger: CAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAA...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCGGAGAATGGCAGGGTTaGCATTCTAACAGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGGEWQG*HSNSVS
Trigger: AGAAACACTGTTAGAATGGCAACCCTGCCATTCTCC...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACCAGGACATCTCAATTTaGTCATTGTTTGTCCTAGAG +
Preference number: 4 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHQDISI*SLFVLE
Trigger: CTCTAGGACAAACAATGAGCAAATTGAGATGTCCTG...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR GCA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTATATTCCCAAAAAGGTaGTCTAGCCCACAAATTCTG +
Preference number: 4 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPIFPKR*SSPQIL
Trigger: CAGAATTTGTGGGCTAGAGCACCTTTTTGGGAATAT...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR GCA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATATTCCCAAAAAGGTaGTCTAGCCCACAAATTCTG +
Preference number: 4 (lower is better)
Translates to: IRLDSRTRLCILLRSIPEIFPKR*SSPQIL
Trigger: CAGAATTTGTGGGCTAGAGCACCTTTTTGGGAATAT...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGCTAGACTCTGTATACTaGTTAGGTCTATACCTGAGA +
Preference number: 4 (lower is better)
Translates to: IRLDSRTRLCILLRSIPELDSVY*LGLYLR
Trigger: TCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAG...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTTTAGGGTACATGTTCTaGTCAATAGGCAACAGATGG +
Preference number: 4 (lower is better)
Translates to: RLDSRTRLCILLRSIPEILGYMF*SIGNRW
Trigger: CCATCTGTTGCCTATTGACCAGAACATGTACCCTAA...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACATTGGCTGGAAGTTTTaGTCTATAGGTTTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHIGWKF*SIGFGL
Trigger: GAGACCAAAACCTATAGACCAAAACTTCCAGCCAAT...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp ATGAAACATATCAGCCTCATCCTCCCAATACAGGACATCTCAATTTGCTCATTGACAGCTGGAGCTCATTaGCTGGAAGTTTTGGTCTAT +
Preference number: 4 (lower is better)
Translates to: MKHISLILPIQDISICSLTAGAH*LEVLVY
Trigger: ATAGACCAAAACTTCCAGCCAATGAGCTCCAGCTGT...CAATGAGCAAATTGAGATGTCCTGTATTGGGAGGATGAGGCTGATATGTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCACTGAAGGGGTGACATaGAATGATATGATTGGTCTG +
Preference number: 4 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSTEGVT*NDMIGL
Trigger: CAGACCAATCATATCATTCCATGTCACCCCTTCAGT...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTTCCAGGGTAGAGGGCTaGAACAAACTGCTAATTGCT +
Preference number: 4 (lower is better)
Translates to: LGDGREMTEPFSISGDFFSRVEG*NKLLIA
Trigger: AGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGA...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTGTATGCCTAAGATCCTaGCTGGGTCTTCAATTGCTC +
Preference number: 4 (lower is better)
Translates to: LGDGREMTEPFSISGDFFVCLRS*LGLQLL
Trigger: GAGCAATTGAAGACCCAGCCAGGATCTTAGGCATAC...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp ATGAAACATATCAGCCTCATCCTCCCAATACAGGACATCTCAATTTGCTCATTGTTGAGTCTCCAGCTGTaGGACTCAGGAAGATTCAAT +
Preference number: 4 (lower is better)
Translates to: MKHISLILPIQDISICSLLSLQL*DSGRFN
Trigger: ATTGAATCTTCCTGAGTCCCACAGCTGGAGACTCAA...CAATGAGCAAATTGAGATGTCCTGTATTGGGAGGATGAGGCTGATATGTTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTACTGGGGATGATGAATaGTATAGCATCAATACCATC +
Preference number: 4 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPTGDDE*YSINTI
Trigger: GATGGTATTGATGCTATACCATTCATCATCCCCAGT...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR CCA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTCCCCTAAAAAGGCTATaGCAGATCCTGCTATTTAAC +
Preference number: 4 (lower is better)
Translates to: RLDSRTRLCILLRSIPEIPLKRL*QILLFN
Trigger: GTTAAATAGCAGGATCTGCCATAGCCTTTTTAGGGG...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGGTTCATTGAATAAGTaGCAGAACCAGGATTTGAAC +
Preference number: 4 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHGSLNK*QNQDLN
Trigger: GTTCAAATCCTGGTTCTGCCACTTATTCAATGAACC...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376020.8
3UTR CAA 72 bp AGCTTTTCAATGTCAGAGTTGCTTCCTGGAATACATTaGAGTCTAATCTTTGAGGTTGCCTTGGAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: SFSMSELLPGIH*SLIFEVALESR
Trigger: TCTGCTCTCCAAGGCAACCTCAAAGATTAGACTCAAATGTATTCCAGGAAGCAACTCTGACATTGAAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGGTTAAACCTGGCAAATaGGATGTAGATAAGGATTTG +
Preference number: 4 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMVKPGK*DVDKDL
Trigger: CAAATCCTTATCTACATCTCATTTGCCAGGTTTAAC...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR TCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGTTGCTATCTACTTGCTaGGAAACTGCTAACAAAGAA +
Preference number: 4 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMLLSTC*ETANKE
Trigger: TTCTTTGTTAGCAGTTTCTCAGCAAGTAGATAGCAA...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR TCA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTTGGGTGATGAGTACTTaGTGTCTTTGGTGTCCTAGT +
Preference number: 4 (lower is better)
Translates to: LGDGREMTEPFSISGDFFWVMST*CLWCPS
Trigger: ACTAGGACACCAAAGACATCAAGTACTCATCACCCA...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTGCTCAGAAGAAAAGATaGCAACTATGGCCTCCATTG +
Preference number: 4 (lower is better)
Translates to: LGDGREMTEPFSISGDFFAQKKR*QLWPPL
Trigger: CAATGGAGGCCATAGTTGTCATCTTTTCTTCTGAGC...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTCCTTTTATTGAAATATaGCCCTTGATGACAATCTGG +
Preference number: 4 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPPFIEI*PLMTIW
Trigger: CCAGATTGTCATCAAGGGTCATATTTCAATAAAAGG...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR TCA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGGGCAGAACCAGGATTTaGACACAGTTCATTCTAATG +
Preference number: 4 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKGRTRI*TQFILM
Trigger: CATTAGAATGAACTGTGTTCAAATCCTGGTTCTGCC...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCGGCAGAACCAGGATTTaGACACAGTTCATTCTAATG +
Preference number: 4 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGGRTRI*TQFILM
Trigger: CATTAGAATGAACTGTGTTCAAATCCTGGTTCTGCC...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp ATGAAACATATCAGCCTCATCCTCCCAATACAGGACATCTCAATTTGCTCATTGCCCCAGAACAATAAATaGAAGGATCATGGACTAGAG +
Preference number: 4 (lower is better)
Translates to: MKHISLILPIQDISICSLPQNNK*KDHGLE
Trigger: CTCTAGTCCATGATCCTTGCATTTATTGTTCTGGGG...CAATGAGCAAATTGAGATGTCCTGTATTGGGAGGATGAGGCTGATATGTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp TCAACAAGTCAGTACTTCCCATGCTGTAATATGTTCATGAATCTCCTGGAAATCAGTGCAAAGGATTCTTaGTCTGCTGGGACACTTTGT +
Preference number: 4 (lower is better)
Translates to: STSQYFPCCNMFMNLLEISAKDS*SAGTLC
Trigger: ACAAAGTGTCCCAGCAGAGCAAGAATCCTTTGCACT...GATTTCCAGGAGATTCATGAACATATTACAGCATGGGAAGTACTGACTTGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR GCA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTCAAATTCATTGGATTTaGAGACGGCTTTTAAGTTGG +
Preference number: 4 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPQIHWI*RRLLSW
Trigger: CCAACTTAAAAGCCGTCTGCAAATCCAATGAATTTG...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCTTAGGGTACATGTTCTaGTCAATAGGCAACAGATGG +
Preference number: 4 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGLGYMF*SIGNRW
Trigger: CCATCTGTTGCCTATTGACCAGAACATGTACCCTAA...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGTTGGTCTATAGGTTTTaGTCTCTGGGTAAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMLVYRF*SLGKSL
Trigger: AAGACTTTTACCCAGAGACCAAAACCTATAGACCAA...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGGATATGATTGGTCTGTaGCATGATATGGTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKDMIGL*HDMVGL
Trigger: CAGACCAACCATATCATGCCACAGACCAATCATATC...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCAACATTCTGAGTAAGTaGGAGTTTCTGACTGAAGGG +
Preference number: 4 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGNILSK*EFLTEG
Trigger: CCCTTCAGTCAGAAACTCCCACTTACTCAGAATGTT...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TCAACAAGTCAGTACTTCCCATGCTGTAATATGTTCATGAATCTCCTGGAAATCCCTGTTTCCTGTTATTaGATTCCATTTGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: STSQYFPCCNMFMNLLEIPVSCY*IPFVPR
Trigger: CCTGGGGACAAATGGAATCCAATAACAGGAAACAGG...GATTTCCAGGAGATTCATGAACATATTACAGCATGGGAAGTACTGACTTGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR CCA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTAAACTTAAACCCTGCTaGGGAATGCTAAACTCAAGT +
Preference number: 4 (lower is better)
Translates to: RLDSRTRLCILLRSIPEIKLKPC*GMLNSS
Trigger: ACTTGAGTTTAGCATTCCCCAGCAGGGTTTAAGTTT...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTTTGCAGAAATATTATTaGCATAGACGACTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: RLDSRTRLCILLRSIPEILQKYY*HRRLLW
Trigger: CCAGAGGAGTCGTCTATGCCAATAATATTTCTGCAA...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp ATGAAACATATCAGCCTCATCCTCCCAATACAGGACATCTCAATTTGCTCATTGAAAGTCTTGTTGCTATaGGTGGTTAAACCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: MKHISLILPIQDISICSLKVLLL*VVKPGK
Trigger: TTTGCCAGGTTTAACCACTCATAGCAACAAGACTTT...CAATGAGCAAATTGAGATGTCCTGTATTGGGAGGATGAGGCTGATATGTTTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCTTTTCAAAGCATGTTTaGAGTCTCCAAGGAGGTCAA +
Preference number: 4 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGFSKHV*SLQGGQ
Trigger: TTGACCTCCTTGGAGACTTCAAACATGCTTTGAAAA...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAACAAACTGCTAATTaGTATCTACTTGCTGAGAAA +
Preference number: 4 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHEQTAN*YLLAEK
Trigger: TTTCTCAGCAAGTAGATAGCAATTAGCAGTTTGTTC...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR GCA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTCTGATCTGCAGAAAATaGTTTCCTTCTGGGCTAACT +
Preference number: 4 (lower is better)
Translates to: LGDGREMTEPFSISGDFFLICRK*FPSGLT
Trigger: AGTTAGCCCAGAAGGAAAGCATTTTCTGCAGATCAG...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR GCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCCAGGACATCTCAATTTaGTCATTGTTTGTCCTAGAG +
Preference number: 4 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGQDISI*SLFVLE
Trigger: CTCTAGGACAAACAATGAGCAAATTGAGATGTCCTG...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCATAGGTTTTGGTCTCTaGGTAAAAGTCTTGTTGCTA +
Preference number: 4 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSIGFGL*VKVLLL
Trigger: TAGCAACAAGACTTTTACCCAGAGACCAAAACCTAT...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCAAGAAATCACTGGAATaGAGTGCAAAGGATTCTTGC +
Preference number: 4 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGKKSLE*SAKDSC
Trigger: GCAAGAATCCTTTGCACTCCATTCCAGTGATTTCTT...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGTCCCCAACAAACAAGTaGTACTTTTCAAATTCATTG +
Preference number: 4 (lower is better)
Translates to: IRLDSRTRLCILLRSIPESPTNK*YFSNSL
Trigger: CAATGAATTTGAAAAGTACCACTTGTTTGTTGGGGA...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TCAACAAGTCAGTACTTCCCATGCTGTAATATGTTCATGAATCTCCTGGAAATCAAAATGCTTTCCTTCTaGGCTAACTTTTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: STSQYFPCCNMFMNLLEIKMLSF*ANFSLS
Trigger: GGAGAGGGAAAAGTTAGCCCAGAAGGAAAGCATTTT...GATTTCCAGGAGATTCATGAACATATTACAGCATGGGAAGTACTGACTTGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR CCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCCTGTCAGATTCTACTTaGGCATTTACAGCTATATCC +
Preference number: 4 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGLSDST*AFTAIS
Trigger: GGATATAGCTGTAAATGCCCAAGTAGAATCTGACAG...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGATCTGTGAAGGACTATaGATAGGTGACCAAATTCCT +
Preference number: 4 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKICEGL*IGDQIP
Trigger: AGGAATTTGGTCACCTATCCATAGTCCTTCACAGAT...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TCAACAAGTCAGTACTTCCCATGCTGTAATATGTTCATGAATCTCCTGGAAATCCCCCTAAAAAGGCTATaGCAGATCCTGCTATTTAAC +
Preference number: 4 (lower is better)
Translates to: STSQYFPCCNMFMNLLEIPLKRL*QILLFN
Trigger: GTTAAATAGCAGGATCTGCCATAGCCTTTTTAGGGG...GATTTCCAGGAGATTCATGAACATATTACAGCATGGGAAGTACTGACTTGTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR TCA 90 bp ATGAAACATATCAGCCTCATCCTCCCAATACAGGACATCTCAATTTGCTCATTGGTTAAACCTGGCAAATaGGATGTAGATAAGGATTTG +
Preference number: 4 (lower is better)
Translates to: MKHISLILPIQDISICSLVKPGK*DVDKDL
Trigger: CAAATCCTTATCTACATCTCATTTGCCAGGTTTAAC...CAATGAGCAAATTGAGATGTCCTGTATTGGGAGGATGAGGCTGATATGTTTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCCTTAGCACCTTTTATTaGAATATGACCCTTGATGAC +
Preference number: 4 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGLSTFY*NMTLDD
Trigger: GTCATCAAGGGTCATATTTCAATAAAAGGTGCTAAG...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGGCTGTAATATGTTCATaGATCTCCTGGAAATCTAGT +
Preference number: 4 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKAVICS*ISWKSS
Trigger: ACTAGATTTCCAGGAGATTCATGAACATATTACAGC...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR CCA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTATTGGCTGGAAGTTTTaGTCTATAGGTTTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: LGDGREMTEPFSISGDFFIGWKF*SIGFGL
Trigger: GAGACCAAAACCTATAGACCAAAACTTCCAGCCAAT...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTAACAGAAATAACCAATaGCTTAAACTCTGTACCCCC +
Preference number: 4 (lower is better)
Translates to: LGDGREMTEPFSISGDFFNRNNQ*LKLCTP
Trigger: GGGGGTACAGAGTTTAAGCCATTGGTTATTTCTGTT...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGGTCAGAGTTGCTTCCTaGAATACATTTGAGTCTAAT +
Preference number: 4 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKVRVAS*NTFESN
Trigger: ATTAGACTCAAATGTATTCCAGGAAGCAACTCTGAC...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR TCA 90 bp TCAACAAGTCAGTACTTCCCATGCTGTAATATGTTCATGAATCTCCTGGAAATCAATATTGTAATAAGCTaGGTAAGAGGTAGGGATTCC +
Preference number: 4 (lower is better)
Translates to: STSQYFPCCNMFMNLLEINIVIS*VRGRDS
Trigger: GGAATCCCTACCTCTTACTCAGCTTATTACAATATT...GATTTCCAGGAGATTCATGAACATATTACAGCATGGGAAGTACTGACTTGTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR CCA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTCTGTACAACCAACACTaGTTCTTCATCTATAGAAAC +
Preference number: 4 (lower is better)
Translates to: LGDGREMTEPFSISGDFFLYNQH*FFIYRN
Trigger: GTTTCTATAGATGAAGAACCAGTGTTGGTTGTACAG...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CCA 90 bp TCAACAAGTCAGTACTTCCCATGCTGTAATATGTTCATGAATCTCCTGGAAATCGTCAGAGTTGCTTCCTaGAATACATTTGAGTCTAAT +
Preference number: 4 (lower is better)
Translates to: STSQYFPCCNMFMNLLEIVRVAS*NTFESN
Trigger: ATTAGACTCAAATGTATTCCAGGAAGCAACTCTGAC...GATTTCCAGGAGATTCATGAACATATTACAGCATGGGAAGTACTGACTTGTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR CCA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTTCCCCAACAAACAAGTaGTACTTTTCAAATTCATTG +
Preference number: 4 (lower is better)
Translates to: LGDGREMTEPFSISGDFFSPTNK*YFSNSL
Trigger: CAATGAATTTGAAAAGTACCACTTGTTTGTTGGGGA...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS GCA 90 bp CTCCGCCACCATCGCCCTCCAGCTCTACGCCACCCCGCACCGCCCTaGTCCGCCTACTCTCCCGGCTGGAGACGCTCAGGCAGCGAGCGA +
Preference number: 5 (lower is better)
Translates to: LRHHRPPALRHPAPP*SAYSPGWRRSGSER
Trigger: TCGCTCGCTGCCTGAGCGTCTCCAGCCGGGAGAGTAGGCGGAGCAGGGCGGTGCGGGGTGGCGTAGAGCTGGAGGGCGATGGTGGCGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS CCA 90 bp GCTCTACGCCACCCCGCACCGCCCTGCTCCGCCTACTCTCCCGGCTaGAGACGCTCAGGCAGCGAGCGAGCGCAAGGAGGAAATGACACG +
Preference number: 5 (lower is better)
Translates to: ALRHPAPPCSAYSPG*RRSGSERAQGGNDT
Trigger: CGTGTCATTTCCTCCTTGCGCTCGCTCGCTGCCTGAGCGTCTCCAGCCGGGAGAGTAGGCGGAGCAGGGCGGTGCGGGGTGGCGTAGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289292.11
CDS GCA 90 bp TCGAGCGGCCCCGGGTCCCTCCACTTCGCCTACCACCCATCCGGCTaGACTCCTTGGGCTCGCTGTCCCCTTCTTCACCTGCCTCTGTGC +
Preference number: 5 (lower is better)
Translates to: SSGPGSLHFAYHPSG*TPWARCPLLHLPLC
Trigger: GCACAGAGGCAGGTGAAGAAGGGGACAGCGAGCCCAAGGAGTGCAGCCGGATGGGTGGTAGGCGAAGTGGAGGGACCCGGGGCCGCTCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 90 bp ACAGGGACGTACTGGAAGGACCCAGGCCGGTTCTCCATCCTCGGCTaGGCTCAGGCGCCGCCGGGCTCCTTTTCCGAGGGGGCTACGTTG +
Preference number: 5 (lower is better)
Translates to: TGTYWKDPGRFSILG*AQAPPGSFSEGATL
Trigger: CAACGTAGCCCCCTCGGAAAAGGAGCCCGGCGGCGCCTGAGCCCAGCCGAGGATGGAGAACCGGCCTGGGTCCTTCCAGTACGTCCCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS TCA 90 bp AGGCCTGAAGGCTGTCCCGCCTCACTGGAGGTTGTGGTGGGCCCCTaGCTGCTTTGGCGGGCCCTGACTGGTATCCCTCCTGTGGACGGG +
Preference number: 5 (lower is better)
Translates to: RPEGCPASLEVVVGP*LLWRALTGIPPVDG
Trigger: CCCGTCCACAGGAGGGATACCAGTCAGGGCCCGCCAAAGCAGTCAGGGGCCCACCACAACCTCCAGTGAGGCGGGACAGCCTTCAGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS TCA 90 bp TTGGCGGGCCCTGACTGGTATCCCTCCTGTGGACGGGATGACATCTaGGAGCTGGGGGTCAGGTGGCCCCCATTGGTGCGCCGACTACCT +
Preference number: 5 (lower is better)
Translates to: LAGPDWYPSCGRDDI*ELGVRWPPLVRRLP
Trigger: AGGTAGTCGGCGCACCAATGGGGGCCACCTGACCCCCAGCTCTCAGATGTCATCCCGTCCACAGGAGGGATACCAGTCAGGGCCCGCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS TCA 90 bp GTGGCAAGGGGACCACAGGCTCAGATGCCCTGCGCTGCTCTCCATTaGGGAGTTGGGCTCTGGAGGCCTGAAGGCTGTCCCGCCTCACTG +
Preference number: 5 (lower is better)
Translates to: VARGPQAQMPCAALH*GVGLWRPEGCPASL
Trigger: CAGTGAGGCGGGACAGCCTTCAGGCCTCCAGAGCCCAACTCCTCAATGGAGAGCAGCGCAGGGCATCTGAGCCTGTGGTCCCCTTGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 90 bp GCCCTGACTGGTATCCCTCCTGTGGACGGGATGACATCTGAGAGCTaGGGGTCAGGTGGCCCCCATTGGTGCGCCGACTACCTCCTGAGG +
Preference number: 5 (lower is better)
Translates to: ALTGIPPVDGMTSES*GSGGPHWCADYLLR
Trigger: CCTCAGGAGGTAGTCGGCGCACCAATGGGGGCCACCTGACCCCCAGCTCTCAGATGTCATCCCGTCCACAGGAGGGATACCAGTCAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGCCAGGCCCGGGTGCTTaGGGGCGCCAAGCTGATGTG +
Preference number: 5 (lower is better)
Translates to: SRQPALCEKWLATSPGAEPGPGA*GRQADV
Trigger: CACATCAGCTTGGCGCCCCAAAGCACCCGGGCCTGG...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS GCA 90 bp GCCACATTAGGCCGGCCACTGGGGGCCTTAGTTGGCCCTGGGCCTTaGATGATGCAGTCTGTAGAGGCTGGCTCCTCTGGCCTGAGGGAA +
Preference number: 5 (lower is better)
Translates to: ATLGRPLGALVGPGP*MMQSVEAGSSGLRE
Trigger: TTCCCTCAGGCCAGAGGAGCCAGCCTCTACAGACTGCATCATGCAAGGCCCAGGGCCAACTAAGGCCCCCAGTGGCCGGCCTAATGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS GCA 90 bp GCTGCTTCAGGGCATCCCTCCAGCAGCTTGGCCACATGCCATGAGTaGGGCCTACTGACAGGGGCGTTCCTCCATGGAAGTTGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: AASGHPSSSLATCHE*GLLTGAFLHGSCPG
Trigger: CCCTGGGCAACTTCCATGGAGGAACGCCCCTGTCAGTAGGCCGCACTCATGGCATGTGGCCAAGCTGCTGGAGGGATGCCCTGAAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460112.3
CDS-3UTR CAA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTAGTCAGGTGGCCCCCATaGGTGCGCCGACTACCTCCT +
Preference number: 5 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLVRWPP*VRRLPP
Trigger: AGGAGGTAGTCGGCGCACCAATGGGGGCCACCTGAC...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS GCA 90 bp GCTGCTTCAGGGCATCCCTCCAGCAGCTTGGCCACATGCCATGAGTaGGGCCTACTGACAGGGGCGTTCCTCCTCCTGACAATCAGCTTG +
Preference number: 5 (lower is better)
Translates to: AASGHPSSSLATCHE*GLLTGAFLLLTISL
Trigger: CAAGCTGATTGTCAGGAGGAGGAACGCCCCTGTCAGTAGGCCGCACTCATGGCATGTGGCCAAGCTGCTGGAGGGATGCCCTGAAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS GCA 90 bp TCCACTGGTGCCCATCCTGTACGGGTGGGAGCTCCATCCCTTTGCTaGCCCTGGTATCAAGGTGCACATGCTGCAGGTGGGATGCCAGCA +
Preference number: 5 (lower is better)
Translates to: STGAHPVRVGAPSLC*PWYQGAHAAGGMPA
Trigger: TGCTGGCATCCCACCTGCAGCATGTGCACCTTGATACCAGGGGCAGCAAAGGGATGGAGCTCCCACCCGTACAGGATGGGCACCAGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS GCA 90 bp GAGTCCACTGGTGCCCATCCTGTACGGGTGGGAGCTCCATCCCTTTaGTGCCCCTGGTATCAAGGTGCACATGCTGCAGGTGGGATGCCA +
Preference number: 5 (lower is better)
Translates to: ESTGAHPVRVGAPSL*CPWYQGAHAAGGMP
Trigger: TGGCATCCCACCTGCAGCATGTGCACCTTGATACCAGGGGCAGCAAAGGGATGGAGCTCCCACCCGTACAGGATGGGCACCAGTGGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 90 bp GGTGCCCATCCTGTACGGGTGGGAGCTCCATCCCTTTGCTGCCCCTaGTATCAAGGTGCACATGCTGCAGGTGGGATGCCAGCAGCTGTT +
Preference number: 5 (lower is better)
Translates to: GAHPVRVGAPSLCCP*YQGAHAAGGMPAAV
Trigger: AACAGCTGCTGGCATCCCACCTGCAGCATGTGCACCTTGATACCAGGGGCAGCAAAGGGATGGAGCTCCCACCCGTACAGGATGGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 90 bp GCTTCTGCTGCTGGGCTGCACGAAAGAGCCTGTACTTCTCCCAGTTaGGAGGAGGAGGGCGAGGAGGAGGAAAGGCCTTCTTCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: ASAAGLHERACTSPS*EEEGEEEERPSSWL
Trigger: GAGCCAGGAAGAAGGCCTTTCCTCCTCCTCGCCCTCCTCCTCCCAACTGGGAGAAGTACAGGCTCTTTCGTGCAGCCCAGCAGCAGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCTCCGAGGGGGCTACGTaGCCTCCGCCCCCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVSEGAT*PPPPAA
Trigger: AGCTGCTGGGGGCGGAGGCAACGTAGCCCCCTCGGA...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS TCA 90 bp ATGGCTTGGGAGAGAGCGGGGTATCCGGCTAGCTCAGACTCTCGTTaGCAAACCCTCCAGCCAGCGTCCTCCCTTAGCTGGGACCCATCT +
Preference number: 5 (lower is better)
Translates to: MAWERAGYPASSDSR*QTLQPASSLSWDPS
Trigger: AGATGGGTCCCAGCTAAGGGAGGACGCTGGCTGGAGGGTTTGTCAACGAGAGTCTGAGCTAGCCGGATACCCCGCTCTCTCCCAAGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460112.3
CDS GCA 90 bp CCCTGTCTCGAGCCCTCCAGGTGGCCAAAGCTGAGGGGTTGTGGCTaGTCTAGGACCTCCTCAGGATTGAGAGCACAGGAACCAGAGGTT +
Preference number: 5 (lower is better)
Translates to: PCLEPSRWPKLRGCG*SRTSSGLRAQEPEV
Trigger: AACCTCTGGTTCCTGTGCTCTCAATCCTGAGGAGGTCCTAGAGCAGCCACAACCCCTCAGCTTTGGCCACCTGGAGGGCTCGAGACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 90 bp GATGGGTCAGGTGCTTTCCACCAGGTGTTCAGGCCCAAAGAGGACTaGCCAGGCCTCTGGCCAGGGCTTATTCGTCCCTCTAAGCCTGTC +
Preference number: 5 (lower is better)
Translates to: DGSGAFHQVFRPKED*PGLWPGLIRPSKPV
Trigger: GACAGGCTTAGAGGGACGAATAAGCCCTGGCCAGAGGCCTGGCCAGTCCTCTTTGGGCCTGAACACCTGGTGGAAAGCACCTGACCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 90 bp TGCTCTGCTGGGACACTTTGTGAACCCTGTCTCGAGCCCTCCAGGTaGCCAAAGCTGAGGGGTTGTGGCTGCTCTAGGACCTCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: CSAGTLCEPCLEPSR*PKLRGCGCSRTSSG
Trigger: TCCTGAGGAGGTCCTAGAGCAGCCACAACCCCTCAGCTTTGGCCACCTGGAGGGCTCGAGACAGGGTTCACAAAGTGTCCCAGCAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 90 bp ACTGACAGGGGCGTTCCTCCATGGAAGTTGCCCAGGGTGGAGAGATaGCTTGGGAGAGAGCGGGGTATCCGGCTAGCTCAGACTCTCGTT +
Preference number: 5 (lower is better)
Translates to: TDRGVPPWKLPRVER*LGRERGIRLAQTLV
Trigger: AACGAGAGTCTGAGCTAGCCGGATACCCCGCTCTCTCCCAAGCCATCTCTCCACCCTGGGCAACTTCCATGGAGGAACGCCCCTGTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460112.3
CDS-3UTR CAA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTACCGCCTCACTGGAGGTaGTGGTGGGCCCCTGACTGC +
Preference number: 5 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVPPHWR*WWAPDC
Trigger: GCAGTCAGGGGCCCACCACAACCTCCAGTGAGGCGG...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCACTCTTCCGCCGGTTTaGGATCGAGCGGCCCCGGGT +
Preference number: 5 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLATLPPV*DRAAPG
Trigger: ACCCGGGGCCGCTCGATCCAAAACCGGCGGAAGAGT...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS GCA 90 bp GATGGCTCTCATAGGTGGCTTGGCCTGGTTGCTCCAGGCTCTCCATaGTGCCAATGGAGCTGCTTTTCTCGGTGCTGCAATGCCGGGAGA +
Preference number: 5 (lower is better)
Translates to: DGSHRWLGLVAPGSP*CQWSCFSRCCNAGR
Trigger: TCTCCCGGCATTGCAGCACCGAGAAAAGCAGCTCCATTGGCAGCATGGAGAGCCTGGAGCAACCAGGCCAAGCCACCTATGAGAGCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS GCA 90 bp TGCTGCAGGTGGGATGCCAGCAGCTGTTCAGGGGCACTATGGCGATaGCCTGTGGGTCCTATGAGATGTGGAGGTCTGCCAAAAGAAGCC +
Preference number: 5 (lower is better)
Translates to: CCRWDASSCSGALWR*PVGPMRCGGLPKEA
Trigger: GGCTTCTTTTGGCAGACCTCCACATCTCATAGGACCCACAGGGCATCGCCATAGTGCCCCTGAACAGCTGCTGGCATCCCACCTGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS GCA 90 bp TCCTCCTCCTCCTCCTCCTCCTGTTGCTTCTGCTGCTGCTGTTGCTaGTTCTGCTGCTGGGCTGCACGAAAGAGCCTGTACTTCTCCCAG +
Preference number: 5 (lower is better)
Translates to: SSSSSSSCCFCCCCC*FCCWAARKSLYFSQ
Trigger: CTGGGAGAAGTACAGGCTCTTTCGTGCAGCCCAGCAGCAGAAGCAGCAACAGCAGCAGCAGAAGCAACAGGAGGAGGAGGAGGAGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGAGTTGGCCCTGGGCCTaGCATGATGCAGTCTGTAGA +
Preference number: 5 (lower is better)
Translates to: SRQPALCEKWLATSPGAESWPWA*HDAVCR
Trigger: TCTACAGACTGCATCATGCAAGGCCCAGGGCCAACT...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGTCTGATGGCCCTCACTaGTCACTTGGTCATGCCCAC +
Preference number: 5 (lower is better)
Translates to: SRQPALCEKWLATSPGAESDGPH*SLGHAH
Trigger: GTGGGCATGACCAAGTGACAAGTGAGGGCCATCAGA...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCAGCAGAGGGTTGCTGGTaGGCCAATTCACTGGCTGCT +
Preference number: 5 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPAEGCW*ANSLAA
Trigger: AGCAGCCAGTGAATTGGCCAACCAGCAACCCTCTGC...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGCCAGGCCCGGGTGCTTaGGGGCGCCAAGCTGATGTG +
Preference number: 5 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLPGPGA*GRQADV
Trigger: CACATCAGCTTGGCGCCCCAAAGCACCCGGGCCTGG...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGCTCTCCCTGAGACATTaGAGTTGCTCTTCCCCGAGC +
Preference number: 5 (lower is better)
Translates to: SRQPALCEKWLATSPGAELSLRH*SCSSPS
Trigger: GCTCGGGGAAGAGCAACTCAAATGTCTCAGGGAGAG...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGTCAATCTTGGCTGGCTaGTGTAAGCCTAGCCCCTGC +
Preference number: 5 (lower is better)
Translates to: SRQPALCEKWLATSPGAESILAG*CKPSPC
Trigger: GCAGGGGCTAGGCTTACACAAGCCAGCCAAGATTGA...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS GCA 90 bp TCTTCCTCCTCCTCCTCCTCCTCCTGTTGCTTCTGCTGCTGCTGTTaGTGCTTCTGCTGCTGGGCTGCACGAAAGAGCCTGTACTTCTCC +
Preference number: 5 (lower is better)
Translates to: SSSSSSSSCCFCCCC*CFCCWAARKSLYFS
Trigger: GGAGAAGTACAGGCTCTTTCGTGCAGCCCAGCAGCAGAAGCAGCAACAGCAGCAGCAGAAGCAACAGGAGGAGGAGGAGGAGGAGGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS GCA 90 bp CGGATTCAGTGGCTTCCTGTCCCGATGTCCTCCAAAGCCCACCAATaGCATAGTAGCAAGGGGGCTGAGCCTGCTCAGGTTGAGATCCCA +
Preference number: 5 (lower is better)
Translates to: RIQWLPVPMSSKAHQ*HSSKGAEPAQVEIP
Trigger: TGGGATCTCAACCTGAGCAGGCTCAGCCCCCTTGCTACTATGGCATTGGTGGGCTTTGGAGGACATCGGGACAGGAAGCCACTGAATCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 90 bp TGCACATGCTGCAGGTGGGATGCCAGCAGCTGTTCAGGGGCACTATaGCGATGCCCTGTGGGTCCTATGAGATGTGGAGGTCTGCCAAAA +
Preference number: 5 (lower is better)
Translates to: CTCCRWDASSCSGAL*RCPVGPMRCGGLPK
Trigger: TTTTGGCAGACCTCCACATCTCATAGGACCCACAGGGCATCGCCATAGTGCCCCTGAACAGCTGCTGGCATCCCACCTGCAGCATGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 90 bp CTCTGGCCAGGGCTTATTCGTCCCTCTAAGCCTGTCCTAGATTCATaGCTCTCAGGGGCTTGGCTGAGGCACTCGGAAGACCTAGCTCTG +
Preference number: 5 (lower is better)
Translates to: LWPGLIRPSKPVLDS*LSGAWLRHSEDLAL
Trigger: CAGAGCTAGGTCTTCCGAGTGCCTCAGCCAAGCCCCTGAGAGCCATGAATCTAGGACAGGCTTAGAGGGACGAATAAGCCCTGGCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 90 bp GCTTTCCACCAGGTGTTCAGGCCCAAAGAGGACTGGCCAGGCCTCTaGCCAGGGCTTATTCGTCCCTCTAAGCCTGTCCTAGATTCATGG +
Preference number: 5 (lower is better)
Translates to: AFHQVFRPKEDWPGL*PGLIRPSKPVLDSW
Trigger: CCATGAATCTAGGACAGGCTTAGAGGGACGAATAAGCCCTGGCCAGAGGCCTGGCCAGTCCTCTTTGGGCCTGAACACCTGGTGGAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 90 bp CGAGGAGGAGGAAAGGCCTTCTTCCTGGCTCCGAGAAGATCCGACTaGGTCTCATCACCTTTGCTAAAGAGCTCCCTCCTATGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: RGGGKAFFLAPRRSD*VSSPLLKSSLLCCP
Trigger: GGGGCAGCATAGGAGGGAGCTCTTTAGCAAAGGTGATGAGACCCAGTCGGATCTTCTCGGAGCCAGGAAGAAGGCCTTTCCTCCTCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGGGTGGCTTGGCCTGGTaGCTCCAGGCTCTCCATGCT +
Preference number: 5 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKGGLAW*LQALHA
Trigger: AGCATGGAGAGCCTGGAGCAACCAGGCCAAGCCACC...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTAGGTGGCTTGGCCTGGTaGCTCCAGGCTCTCCATGCT +
Preference number: 5 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVGGLAW*LQALHA
Trigger: AGCATGGAGAGCCTGGAGCAACCAGGCCAAGCCACC...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCAAGTTGGCCCTGGGCCTaGCATGATGCAGTCTGTAGA +
Preference number: 5 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPSWPWA*HDAVCR
Trigger: TCTACAGACTGCATCATGCAAGGCCCAGGGCCAACT...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTAGCCTCATTGAGTGGGTaGGAATCCACGCTGGAAGCT +
Preference number: 5 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLASLSG*ESTLEA
Trigger: AGCTTCCAGCGTGGATTCCAACCCACTCAATGAGGC...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTAATGTGGGGGACTGCTTaGGCTCTGGTGTCCCAAAAC +
Preference number: 5 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLMWGTA*ALVSQN
Trigger: GTTTTGGGACACCAGAGCCAAAGCAGTCCCCCACAT...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCAATGTGGGGGACTGCTTaGGCTCTGGTGTCCCAAAAC +
Preference number: 5 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPMWGTA*ALVSQN
Trigger: GTTTTGGGACACCAGAGCCAAAGCAGTCCCCCACAT...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCATCCGGCTGCACTCCTaGGGCTCGCTGTCCCCTTCT +
Preference number: 5 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVIRLHS*GSLSPS
Trigger: AGAAGGGGACAGCGAGCCCAAGGAGTGCAGCCGGAT...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTACTCTCCCTGAGACATTaGAGTTGCTCTTCCCCGAGC +
Preference number: 5 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLLSLRH*SCSSPS
Trigger: GCTCGGGGAAGAGCAACTCAAATGTCTCAGGGAGAG...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTACTGTGCAGCAAGTACTaGCCCTTGGCAACTGTGGGA +
Preference number: 5 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLLCSKY*PLATVG
Trigger: TCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAG...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCACTGTGCAGCAAGTACTaGCCCTTGGCAACTGTGGGA +
Preference number: 5 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPLCSKY*PLATVG
Trigger: TCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAG...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS TCA 90 bp ATGACCTCCACGGACTCCACAGTGAGCATGTGCTTTCTCAGGGTCTaGGGAGGATGGGTCAGGTGCTTTCCACCAGGTGTTCAGGCCCAA +
Preference number: 5 (lower is better)
Translates to: MTSTDSTVSMCFLRV*GGWVRCFPPGVQAQ
Trigger: TTGGGCCTGAACACCTGGTGGAAAGCACCTGACCCATCCTCCTCAGACCCTGAGAAAGCACATGCTCACTGTGGAGTCCGTGGAGGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS TCA 90 bp ACCTGGGTTGGAAGGGCCTTCCATGGCTGCTGCCACAAGTGGCTGTaGATTATGCTCTGGAGACCATCTCCAATGACCTCCACGGACTCC +
Preference number: 5 (lower is better)
Translates to: TWVGRAFHGCCHKWL*IMLWRPSPMTSTDS
Trigger: GGAGTCCGTGGAGGTCATTGGAGATGGTCTCCAGAGCATAATTCACAGCCACTTGTGGCAGCAGCCATGGAAGGCCCTTCCAACCCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS GCA 90 bp AGGCTCTCCATGCTGCCAATGGAGCTGCTTTTCTCGGTGCTGCAATaGCGGGAGAGTGGACACCACTGCACACACACGTCACTTGTGTTG +
Preference number: 5 (lower is better)
Translates to: RLSMLPMELLFSVLQ*RESGHHCTHTSLVL
Trigger: CAACACAAGTGACGTGTGTGTGCAGTGGTGTCCACTCTCCCGGCATTGCAGCACCGAGAAAAGCAGCTCCATTGGCAGCATGGAGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 90 bp GCTGCCAATGGAGCTGCTTTTCTCGGTGCTGCAATGCCGGGAGAGTaGACACCACTGCACACACACGTCACTTGTGTTGCAGCCAGAATG +
Preference number: 5 (lower is better)
Translates to: AANGAAFLGAAMPGE*TPLHTHVTCVAARM
Trigger: CATTCTGGCTGCAACACAAGTGACGTGTGTGTGCAGTGGTGTCCACTCTCCCGGCATTGCAGCACCGAGAAAAGCAGCTCCATTGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 90 bp CCACGCTGGAAGCTCTGTCACAGGCTTTTGGGGATCCAACAGCTTTaGTTGAGGCCTGCATCAGTAGATGCTCAGAGCCCTGTTGGCTGG +
Preference number: 5 (lower is better)
Translates to: PRWKLCHRLLGIQQL*LRPASVDAQSPVGW
Trigger: CCAGCCAACAGGGCTCTGAGCATCTACTGATGCAGGCCTCAACCAAAGCTGTTGGATCCCCAAAAGCCTGTGACAGAGCTTCCAGCGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 90 bp CCGTGGCTTGTTGAACAAGGGAGCCAGAGGCAGAGGGTTGCTGGTTaGCCAATTCACTGGCTGCTCTGCTTGTTCTGTTTGGGTCCAGGA +
Preference number: 5 (lower is better)
Translates to: PWLVEQGSQRQRVAG*PIHWLLCLFCLGPG
Trigger: TCCTGGACCCAAACAGAACAAGCAGAGCAGCCAGTGAATTGGCCAACCAGCAACCCTCTGCCTCTGGCTCCCTTGTTCAACAAGCCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCACCGCCTCACTGGAGGTaGTGGTGGGCCCCTGACTGC +
Preference number: 5 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAAPPHWR*WWAPDC
Trigger: GCAGTCAGGGGCCCACCACAACCTCCAGTGAGGCGG...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTACTCTGTCACAGGCTTTaGGGGATCCAACAGCTTTGG +
Preference number: 5 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLLCHRL*GIQQLW
Trigger: CCAAAGCTGTTGGATCCCCAAAAGCCTGTGACAGAG...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGGGGAGCTCCATCCCTTaGCTGCCCCTGGTATCAAGG +
Preference number: 5 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKGSSIP*LPLVSR
Trigger: CCTTGATACCAGGGGCAGCAAAGGGATGGAGCTCCC...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTAAGAACAGTCCGTGGCTaGTTGAACAAGGGAGCCAGA +
Preference number: 5 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLRTVRG*LNKGAR
Trigger: TCTGGCTCCCTTGTTCAACAAGCCACGGACTGTTCT...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATACTCTTCCGCCGGTTTaGGATCGAGCGGCCCCGGGT +
Preference number: 5 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYTLPPV*DRAAPG
Trigger: ACCCGGGGCCGCTCGATCCAAAACCGGCGGAAGAGT...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCACTCTTCCGCCGGTTTaGGATCGAGCGGCCCCGGGT +
Preference number: 5 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPTLPPV*DRAAPG
Trigger: ACCCGGGGCCGCTCGATCCAAAACCGGCGGAAGAGT...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCACTTTTGTTGAAGAGCTaGTCTCTGGGGCTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPLLLKS*SLGLGG
Trigger: ACCTCCCAGCCCCAGAGACAAGCTCTTCAACAAAAG...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGTGGGTCTCATCACCTTaGCTAAAGAGCTCCCTCCTA +
Preference number: 5 (lower is better)
Translates to: SRQPALCEKWLATSPGAEWVSSP*LKSSLL
Trigger: TAGGAGGGAGCTCTTTAGCAAAGGTGATGAGACCCA...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTACTGTACTTCTCCCAGTaGGGAGGAGGAGGGCGAGGA +
Preference number: 5 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVLYFSQ*GGGGRG
Trigger: TCCTCGCCCTCCTCCTCCCAACTGGGAGAAGTACAG...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCAAGGGCAGAATTGGCATaGATGTCCTCTAGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPRAELA*MSSSSP
Trigger: AGGGCTGCTAGAGGACATCAATGCCAATTCTGCCCT...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCCAGACGGCTTTTAAGTaGGCCTCCACCTCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLAQTAFK*ASTSSP
Trigger: TGGGGAGGAGGTGGAGGCCAACTTAAAAGCCGTCTG...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGAACAGGTTGACCACTTaGTCCAGGTCCCCAACAAAC +
Preference number: 5 (lower is better)
Translates to: SRQPALCEKWLATSPGAENRLTT*SRSPTN
Trigger: GTTTGTTGGGGACCTGGACAAAGTGGTCAACCTGTT...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTAAAAGTGCTGGTAATCTaGGAGCTGGTCCTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLKVLVI*ELVLRQ
Trigger: CTGCCTCAGGACCAGCTCCAAGATTACCAGCACTTT...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGGAACAATTCAACGCCTaGGCACTTGCTTACCTAGCC +
Preference number: 5 (lower is better)
Translates to: SRQPALCEKWLATSPGAEEQFNA*ALAYLA
Trigger: GGCTAGGTAAGCAAGTGCCAAGGCGTTGAATTGTTC...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGGTAATACTGGCAGTGTaGCAGCACCGTCACACACAA +
Preference number: 5 (lower is better)
Translates to: SRQPALCEKWLATSPGAEVILAV*QHRHTQ
Trigger: TTGTGTGTGACGGTGCTGCAACACTGCCAGTATTAC...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTAACAGCTATATCCTGGTaGAGTCTCCAGCTGTGGGAC +
Preference number: 5 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLTAISW*SLQLWD
Trigger: GTCCCACAGCTGGAGACTCAACCAGGATATAGCTGT...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGATCTTTGAGGTTGCCTaGGAGAGCAGATCACCAAGG +
Preference number: 5 (lower is better)
Translates to: SRQPALCEKWLATSPGAEIFEVA*ESRSPR
Trigger: CCTTGGTGATCTGCTCTCCAAGGCAACCTCAAAGAT...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS TCA 90 bp GCACACACACGTCACTTGTGTTGCAGCCAGAATGCCAGGACAAGCTaGAGGCTTCAGAAGGGAAATGCATGGTGGTGGCTGCTTCAGGGC +
Preference number: 5 (lower is better)
Translates to: AHTRHLCCSQNARTS*RLQKGNAWWWLLQG
Trigger: GCCCTGAAGCAGCCACCACCATGCATTTCCCTTCTGAAGCCTTCAGCTTGTCCTGGCATTCTGGCTGCAACACAAGTGACGTGTGTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS GCA 90 bp GCTCTGTCACAGGCTTTTGGGGATCCAACAGCTTTGGTTGAGGCCTaGATCAGTAGATGCTCAGAGCCCTGTTGGCTGGATTCAGGAGGC +
Preference number: 5 (lower is better)
Translates to: ALSQAFGDPTALVEA*ISRCSEPCWLDSGG
Trigger: GCCTCCTGAATCCAGCCAACAGGGCTCTGAGCATCTACTGATGCAGGCCTCAACCAAAGCTGTTGGATCCCCAAAAGCCTGTGACAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 90 bp TCAGGATTGAGAGCACAGGAACCAGAGGTTTCTGAACTGAAATACTaGGGTGGCAGCTCCTCTTCCTCCTCCTCTGCCTCCTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SGLRAQEPEVSELKY*GGSSSSSSSASSSS
Trigger: GGAGGAGGAGGAGGCAGAGGAGGAGGAAGAGGAGCTGCCACCCCAGTATTTCAGTTCAGAAACCTCTGGTTCCTGTGCTCTCAATCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTTCCGAGGGGGCTACGTaGCCTCCGCCCCCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPSEGAT*PPPPAA
Trigger: AGCTGCTGGGGGCGGAGGCAACGTAGCCCCCTCGGA...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCGGTGGCTTGGCCTGGTaGCTCCAGGCTCTCCATGCT +
Preference number: 5 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPGGLAW*LQALHA
Trigger: AGCATGGAGAGCCTGGAGCAACCAGGCCAAGCCACC...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGGCTCTCATAGGTGGCTaGGCCTGGTTGCTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLALIGG*AWLLQA
Trigger: AGCCTGGAGCAACCAGGCCAAGCCACCTATGAGAGC...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTACTCTCCATTGAGGAGTaGGGCTCTGGAGGCCTGAAG +
Preference number: 5 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVLSIEE*GSGGLK
Trigger: CTTCAGGCCTCCAGAGCCCAACTCCTCAATGGAGAG...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGATCCAACAGCTTTGGTaGAGGCCTGCATCAGTAGAT +
Preference number: 5 (lower is better)
Translates to: SRQPALCEKWLATSPGAEIQQLW*RPASVD
Trigger: ATCTACTGATGCAGGCCTCAACCAAAGCTGTTGGAT...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCGGGGATCCAACAGCTTaGGTTGAGGCCTGCATCAGT +
Preference number: 5 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLAGDPTA*VEACIS
Trigger: ACTGATGCAGGCCTCAACCAAAGCTGTTGGATCCCC...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAAGGGAGCTCCATCCCTTaGCTGCCCCTGGTATCAAGG +
Preference number: 5 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQGSSIP*LPLVSR
Trigger: CCTTGATACCAGGGGCAGCAAAGGGATGGAGCTCCC...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTATGTGACAAGGGACCCTaGCTTTTCTGGAGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVCDKGP*LFWSWA
Trigger: GGCCCAGCTCCAGAAAAGCAAGGGTCCCTTGTCACA...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGTGTGACAAGGGACCCTaGCTTTTCTGGAGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKCDKGP*LFWSWA
Trigger: GGCCCAGCTCCAGAAAAGCAAGGGTCCCTTGTCACA...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGATGGCTCTCAGGGGCTaGGCTGAGGCACTCGGAAGA +
Preference number: 5 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLMALRG*AEALGR
Trigger: TCTTCCGAGTGCCTCAGCCAAGCCCCTGAGAGCCAT...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGCTGGGTTTCCAAGTGTaGCCAGGTGCCAAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKLGFQV*PGAKLL
Trigger: CAGCAGCTTGGCACCTGGCAACACTTGGAAACCCAG...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAACTGTACTTCTCCCAGTaGGGAGGAGGAGGGCGAGGA +
Preference number: 5 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQLYFSQ*GGGGRG
Trigger: TCCTCGCCCTCCTCCTCCCAACTGGGAGAAGTACAG...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTACCAAGTGACCCCTTATaGGAGGCAAGAAATCACTGG +
Preference number: 5 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLPSDPL*EARNHW
Trigger: CCAGTGATTTCTTGCCTCCAATAAGGGGTCACTTGG...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGCAGACGGCTTTTAAGTaGGCCTCCACCTCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKQTAFK*ASTSSP
Trigger: TGGGGAGGAGGTGGAGGCCAACTTAAAAGCCGTCTG...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTACCTGAGACATTTGAGTaGCTCTTCCCCGAGCTTGAT +
Preference number: 5 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLPETFE*LFPELD
Trigger: ATCAAGCTCGGGGAAGAGCAACTCAAATGTCTCAGG...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCTTTCCCCTGCAAAGCTaGGGTGAGGCCCTGAAACTG +
Preference number: 5 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLAFPLQS*GEALKL
Trigger: CAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAA...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTATGGCTGGGTCTTCAATaGCTCTGGGGAGCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVWLGLQ*LWGAGS
Trigger: AGAGCCAGCTCCCCAGAGCAATTGAAGACCCAGCCA...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS TCA 90 bp GTCCCCTTCTTCACCTGCCTCTGTGCCACTAGCTGCTTTAGTGGTTaGAGAACAGTCCGTGGCTTGTTGAACAAGGGAGCCAGAGGCAGA +
Preference number: 5 (lower is better)
Translates to: VPFFTCLCATSCFSG*RTVRGLLNKGARGR
Trigger: TCTGCCTCTGGCTCCCTTGTTCAACAAGCCACGGACTGTTCTTCAACCACTAAAGCAGCTAGTGGCACAGAGGCAGGTGAAGAAGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS GCA 90 bp AGCCAGAGGCAGAGGGTTGCTGGTTGGCCAATTCACTGGCTGCTCTaGTTGTTCTGTTTGGGTCCAGGAAACCTTTTTCTGAGGGGTGTC +
Preference number: 5 (lower is better)
Translates to: SQRQRVAGWPIHWLL*LFCLGPGNLFLRGV
Trigger: GACACCCCTCAGAAAAAGGTTTCCTGGACCCAAACAGAACAAGCAGAGCAGCCAGTGAATTGGCCAACCAGCAACCCTCTGCCTCTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS GCA 90 bp GCACTGTCAGCTTCCTGGGTTTCCAAGTGTTGCCAGGTGCCAAGCTaGTGTCCTCGAGGGCACTGTGCTGAGGATTATGATAGCAAACTG +
Preference number: 5 (lower is better)
Translates to: ALSASWVSKCCQVPS*CPRGHCAEDYDSKL
Trigger: CAGTTTGCTATCATAATCCTCAGCACAGTGCCCTCGAGGACAGCAGCTTGGCACCTGGCAACACTTGGAAACCCAGGAAGCTGACAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGGCCCTCACTTGTCACTaGGTCATGCCCACTGAGGCA +
Preference number: 5 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLALTCH*VMPTEA
Trigger: TGCCTCAGTGGGCATGACCAAGTGACAAGTGAGGGC...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTATCTGATGGCCCTCACTaGTCACTTGGTCATGCCCAC +
Preference number: 5 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVSDGPH*SLGHAH
Trigger: GTGGGCATGACCAAGTGACAAGTGAGGGCCATCAGA...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAAATGCTCAGAGCCCTGTaGGCTGGATTCAGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQMLRAL*AGFRRL
Trigger: CAGCCTCCTGAATCCAGCCAACAGGGCTCTGAGCAT...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGACAGTCCGTGGCTTGTaGAACAAGGGAGCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLTVRGL*NKGARG
Trigger: GCCTCTGGCTCCCTTGTTCAACAAGCCACGGACTGT...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCAATCCGGCTGCACTCCTaGGGCTCGCTGTCCCCTTCT +
Preference number: 5 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAAIRLHS*GSLSPS
Trigger: AGAAGGGGACAGCGAGCCCAAGGAGTGCAGCCGGAT...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTGTGACAAGGGACCCTaGCTTTTCTGGAGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: RTGERDCISSNTGSVAAPCDKGP*LFWSWA
Trigger: GGCCCAGCTCCAGAAAAGCAAGGGTCCCTTGTCACA...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCATGGCTCTCAGGGGCTaGGCTGAGGCACTCGGAAGA +
Preference number: 5 (lower is better)
Translates to: LVRNRELSWITGQHLAITMALRG*AEALGR
Trigger: TCTTCCGAGTGCCTCAGCCAAGCCCCTGAGAGCCAT...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGGGCATCCTCCCCAGCTaGAGCAGTAGAAGCCTTCAA +
Preference number: 5 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKGILPS*SSRSLQ
Trigger: TTGAAGGCTTCTACTGCTCAAGCTGGGGAGGATGCC...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTATACAGCTGGAGCTCATaGGCTGGAAGTTTTGGTCTA +
Preference number: 5 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLYSWSS*AGSFGL
Trigger: TAGACCAAAACTTCCAGCCAATGAGCTCCAGCTGTA...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGCTGGGTTTCCAAGTGTaGCCAGGTGCCAAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLLGFQV*PGAKLL
Trigger: CAGCAGCTTGGCACCTGGCAACACTTGGAAACCCAG...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACCCAGGCCCGGGTGCTTaGGGGCGCCAAGCTGATGTG +
Preference number: 5 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHPGPGA*GRQADV
Trigger: CACATCAGCTTGGCGCCCCAAAGCACCCGGGCCTGG...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCAAAGTGCTGGTAATCTaGGAGCTGGTCCTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLAKVLVI*ELVLRQ
Trigger: CTGCCTCAGGACCAGCTCCAAGATTACCAGCACTTT...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTACTTGCTGCAGCTCCCTaGGGTAGAAGCTTGTGGCTT +
Preference number: 5 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVLAAAP*GRSLWL
Trigger: AAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAG...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGCCTCTTCCCCTGAACTaGCTGCTGGGAAAGGTAAGG +
Preference number: 5 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKPLPLN*LLGKVR
Trigger: CCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGG...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCTCCCTGCTGCTACAGTaGACCTTCAAGGACCCTGAG +
Preference number: 5 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVSLLLQ*TFKDPE
Trigger: CTCAGGGTCCTTGAAGGTCAACTGTAGCAGCAGGGA...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGTGGCAAATTCTTTGGTaGAATGAGACATCCCTGCTG +
Preference number: 5 (lower is better)
Translates to: SRQPALCEKWLATSPGAEWQILW*NETSLL
Trigger: CAGCAGGGATGTCTCATTCAACCAAAGAATTTGCCA...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGCTTTGGGGATCTCCCTaGGCCTGCCTTCCAAACTGC +
Preference number: 5 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLLWGSP*ACLPNC
Trigger: GCAGTTTGGAAGGCAGGCCAAGGGAGATCCCCAAAG...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATTCCTCCATCTGGGGCTaGCTACTGGCAGAGCAGCAC +
Preference number: 5 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYSSIWG*LLAEQH
Trigger: GTGCTGCTCTGCCAGTAGCAAGCCCCAGATGGAGGA...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACTCCTCCATCTGGGGCTaGCTACTGGCAGAGCAGCAC +
Preference number: 5 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDSSIWG*LLAEQH
Trigger: GTGCTGCTCTGCCAGTAGCAAGCCCCAGATGGAGGA...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGAGATCACCAAGGCCCTaGCTTTCCAGGGAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: RTGERDCISSNTGSVAAPRSPRP*LSRELS
Trigger: GCTCAGCTCCCTGGAAAGCAAGGGCCTTGGTGATCT...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS TCA 90 bp GTGCCACTAGCTGCTTTAGTGGTTGAAGAACAGTCCGTGGCTTGTTaGACAAGGGAGCCAGAGGCAGAGGGTTGCTGGTTGGCCAATTCA +
Preference number: 5 (lower is better)
Translates to: VPLAALVVEEQSVAC*TREPEAEGCWLANS
Trigger: TGAATTGGCCAACCAGCAACCCTCTGCCTCTGGCTCCCTTGTTCAACAAGCCACGGACTGTTCTTCAACCACTAAAGCAGCTAGTGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 90 bp GAACAAGGGAGCCAGAGGCAGAGGGTTGCTGGTTGGCCAATTCACTaGCTGCTCTGCTTGTTCTGTTTGGGTCCAGGAAACCTTTTTCTG +
Preference number: 5 (lower is better)
Translates to: EQGSQRQRVAGWPIH*LLCLFCLGPGNLFL
Trigger: CAGAAAAAGGTTTCCTGGACCCAAACAGAACAAGCAGAGCAGCCAGTGAATTGGCCAACCAGCAACCCTCTGCCTCTGGCTCCCTTGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTAATCCGGAAGGAGCCTTaGATGAGAATGAGGGCCTCT +
Preference number: 5 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVIRKEP*MRMRAS
Trigger: AGAGGCCCTCATTCTCATCAAAGGCTCCTTCCGGAT...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGCTCCTGACAATCAGCTaGAGAATCCGGAAGGAGCCT +
Preference number: 5 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKLLTIS*RIRKEP
Trigger: AGGCTCCTTCCGGATTCTCAAGCTGATTGTCAGGAG...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCACATCCCTCCAGCAGCTaGGCCACATGCCATGAGTGC +
Preference number: 5 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAAHPSSS*ATCHEC
Trigger: GCACTCATGGCATGTGGCCAAGCTGCTGGAGGGATG...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGCACAGTCAGAAGCATTaGAGCTGGCCGAGAAGGAGC +
Preference number: 5 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLHSQKH*SWPRRS
Trigger: GCTCCTTCTCGGCCAGCTCAAATGCTTCTGACTGTG...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGCACAGTCAGAAGCATTaGAGCTGGCCGAGAAGGAGC +
Preference number: 5 (lower is better)
Translates to: RTGERDCISSNTGSVAAPHSQKH*SWPRRS
Trigger: GCTCCTTCTCGGCCAGCTCAAATGCTTCTGACTGTG...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTGTCAGGTGGCCCCCATaGGTGCGCCGACTACCTCCT +
Preference number: 5 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPVRWPP*VRRLPP
Trigger: AGGAGGTAGTCGGCGCACCAATGGGGGCCACCTGAC...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATCTCTCCATTGAGGAGTaGGGCTCTGGAGGCCTGAAG +
Preference number: 5 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYLSIEE*GSGGLK
Trigger: CTTCAGGCCTCCAGAGCCCAACTCCTCAATGGAGAG...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAAGGGGATCCAACAGCTTaGGTTGAGGCCTGCATCAGT +
Preference number: 5 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQGDPTA*VEACIS
Trigger: ACTGATGCAGGCCTCAACCAAAGCTGTTGGATCCCC...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACGCCAGAGGCAGAGGGTaGCTGGTTGGCCAATTCACT +
Preference number: 5 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDARGRG*LVGQFT
Trigger: AGTGAATTGGCCAACCAGCAACCCTCTGCCTCTGGC...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCACAGTCCGTGGCTTGTaGAACAAGGGAGCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: LVRNRELSWITGQHLAITTVRGL*NKGARG
Trigger: GCCTCTGGCTCCCTTGTTCAACAAGCCACGGACTGT...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTAAGAACAGTCCGTGGCTaGTTGAACAAGGGAGCCAGA +
Preference number: 5 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVRTVRG*LNKGAR
Trigger: TCTGGCTCCCTTGTTCAACAAGCCACGGACTGTTCT...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TCAAGGCAGCCAGCTCTCTGTGAGAAATGGCTGGCCACAAGCCCTGGGGCAGAGCATTGGCTGGAAGTTTaGGTCTATAGGTTTTGGTCT +
Preference number: 5 (lower is better)
Translates to: SRQPALCEKWLATSPGAEHWLEV*VYRFWS
Trigger: AGACCAAAACCTATAGACCAAAACTTCCAGCCAATG...CTCTGCCCCAGGGCTTGTGGCCAGCCATTTCTCACAGAGAGCTGGCTGCCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCAAATTGCTCGGTAGCTaGACAAGTCCAGTGCTGGGT +
Preference number: 5 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLAKLLGS*TSPVLG
Trigger: ACCCAGCACTGGACTTGTCAAGCTACCGAGCAATTT...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCCTGAGCCTGCTCAGGTaGAGATCCCAAGTGACCCCT +
Preference number: 5 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPLSLLR*RSQVTP
Trigger: AGGGGTCACTTGGGATCTCAACCTGAGCAGGCTCAG...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCTGAGCCTGCTCAGGTaGAGATCCCAAGTGACCCCT +
Preference number: 5 (lower is better)
Translates to: LVRNRELSWITGQHLAITLSLLR*RSQVTP
Trigger: AGGGGTCACTTGGGATCTCAACCTGAGCAGGCTCAG...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTATGGCAAATTCTTTGGTaGAATGAGACATCCCTGCTG +
Preference number: 5 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLWQILW*NETSLL
Trigger: CAGCAGGGATGTCTCATTCAACCAAAGAATTTGCCA...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAATCAATCTTGGCTGGCTaGTGTAAGCCTAGCCCCTGC +
Preference number: 5 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQSILAG*CKPSPC
Trigger: GCAGGGGCTAGGCTTACACAAGCCAGCCAAGATTGA...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACCTTTGGGGATCTCCCTaGGCCTGCCTTCCAAACTGC +
Preference number: 5 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDLWGSP*ACLPNC
Trigger: GCAGTTTGGAAGGCAGGCCAAGGGAGATCCCCAAAG...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATAGATCACCAAGGCCCTaGCTTTCCAGGGAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYRSPRP*LSRELS
Trigger: GCTCAGCTCCCTGGAAAGCAAGGGCCTTGGTGATCT...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS CCA 90 bp AAGCCTTCAATTCCTTGTTGTCACCTGGGTTGGAAGGGCCTTCCATaGCTGCTGCCACAAGTGGCTGTGAATTATGCTCTGGAGACCATC +
Preference number: 5 (lower is better)
Translates to: KPSIPCCHLGWKGLP*LLPQVAVNYALETI
Trigger: GATGGTCTCCAGAGCATAATTCACAGCCACTTGTGGCAGCAGCCATGGAAGGCCCTTCCAACCCAGGTGACAACAAGGAATTGAAGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 90 bp CTGTGGCATGATATGGTTGGTCTGCGGAATGATATGATTGGTCCATaGGATGGCGCCTCAATTCCCTACAGCTGGAGCTCATTGGCTGGA +
Preference number: 5 (lower is better)
Translates to: LWHDMVGLRNDMIGP*DGASIPYSWSSLAG
Trigger: TCCAGCCAATGAGCTCCAGCTGTAGGGAATTGAGGCGCCATCCCATGGACCAATCATATCATTCCGCAGACCAACCATATCATGCCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 90 bp AGGGGGCTGAGCCTGCTCAGGTTGAGATCCCAAGTGACCCCTTATTaGAGGCAAGAAATCACTGGAATGGAGTGCAAAGGATTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: RGLSLLRLRSQVTPY*RQEITGMECKGFLL
Trigger: GAGCAAGAATCCTTTGCACTCCATTCCAGTGATTTCTTGCCTCCAATAAGGGGTCACTTGGGATCTCAACCTGAGCAGGCTCAGCCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCCACACGTCACTTGTGTaGCAGCCAGAATGCCAGGAC +
Preference number: 5 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPHTSLV*QPECQD
Trigger: GTCCTGGCATTCTGGCTGCAACACAAGTGACGTGTG...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATCACAGTCAGAAGCATTaGAGCTGGCCGAGAAGGAGC +
Preference number: 5 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYHSQKH*SWPRRS
Trigger: GCTCCTTCTCGGCCAGCTCAAATGCTTCTGACTGTG...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCGTCAGGTGGCCCCCATaGGTGCGCCGACTACCTCCT +
Preference number: 5 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSVRWPP*VRRLPP
Trigger: AGGAGGTAGTCGGCGCACCAATGGGGGCCACCTGAC...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCTCTGATGGCCCTCACTaGTCACTTGGTCATGCCCAC +
Preference number: 5 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPSDGPH*SLGHAH
Trigger: GTGGGCATGACCAAGTGACAAGTGAGGGCCATCAGA...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGCTCTGTCACAGGCTTTaGGGGATCCAACAGCTTTGG +
Preference number: 5 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLLCHRL*GIQQLW
Trigger: CCAAAGCTGTTGGATCCCCAAAAGCCTGTGACAGAG...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACTTGTTGTCACCTGGGTaGGAAGGGCCTTCCATGGCT +
Preference number: 5 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDLLSPG*EGPSMA
Trigger: AGCCATGGAAGGCCCTTCCAACCCAGGTGACAACAA...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGGCCTTCAATTCCTTGTaGTCACCTGGGTTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLAFNSL*SPGLEG
Trigger: CCCTTCCAACCCAGGTGACAACAAGGAATTGAAGGC...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCGGCATCCTCCCCAGCTaGAGCAGTAGAAGCCTTCAA +
Preference number: 5 (lower is better)
Translates to: LVRNRELSWITGQHLAITGILPS*SSRSLQ
Trigger: TTGAAGGCTTCTACTGCTCAAGCTGGGGAGGATGCC...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCACTGGGTTTCCAAGTGTaGCCAGGTGCCAAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAALGFQV*PGAKLL
Trigger: CAGCAGCTTGGCACCTGGCAACACTTGGAAACCCAG...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTATGGGTCTCATCACCTTaGCTAAAGAGCTCCCTCCTA +
Preference number: 5 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVWVSSP*LKSSLL
Trigger: TAGGAGGGAGCTCTTTAGCAAAGGTGATGAGACCCA...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAAACCAACTTCTCCTGGTaGGCCTCTGAATCGATGCTG +
Preference number: 5 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQTNFSW*ASESML
Trigger: CAGCATCGATTCAGAGGCCAACCAGGAGAAGTTGGT...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAAAAAGTGCTGGTAATCTaGGAGCTGGTCCTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQKVLVI*ELVLRQ
Trigger: CTGCCTCAGGACCAGCTCCAAGATTACCAGCACTTT...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCCCTGAGACATTTGAGTaGCTCTTCCCCGAGCTTGAT +
Preference number: 5 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVPETFE*LFPELD
Trigger: ATCAAGCTCGGGGAAGAGCAACTCAAATGTCTCAGG...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCCAGGCCTTGGCTGGGTaGTGTGATACCAAGGATTGG +
Preference number: 5 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPQALAG*CDTKDW
Trigger: CCAATCCTTGGTATCACACAACCCAGCCAAGGCCTG...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATTCCCTGCTGCTACAGTaGACCTTCAAGGACCCTGAG +
Preference number: 5 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYSLLLQ*TFKDPE
Trigger: CTCAGGGTCCTTGAAGGTCAACTGTAGCAGCAGGGA...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCCCTACCTTCTCAATCTaGGCTGGCTTGTGTAAGCCT +
Preference number: 5 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVPTFSI*AGLCKP
Trigger: AGGCTTACACAAGCCAGCCAAGATTGAGAAGGTAGG...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGGTAATACTGGCAGTGTaGCAGCACCGTCACACACAA +
Preference number: 5 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKVILAV*QHRHTQ
Trigger: TTGTGTGTGACGGTGCTGCAACACTGCCAGTATTAC...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTATCAGCCATCATGCTaGCCTATTACCCATGGGGGC +
Preference number: 5 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLYQPSC*PITHGG
Trigger: GCCCCCATGGGTAATAGGCAAGCATGATGGCTGATA...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAAACAGCTATATCCTGGTaGAGTCTCCAGCTGTGGGAC +
Preference number: 5 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQTAISW*SLQLWD
Trigger: GTCCCACAGCTGGAGACTCAACCAGGATATAGCTGT...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS TCA 90 bp GTTCCAGTTCTAAGAACAGGAAGGAGTAGCACTGAAGGCAAGGTATaGCCATCAGCCTGGATGGACCTAGATATGGCCACAGCCTTAGGG +
Preference number: 5 (lower is better)
Translates to: VPVLRTGRSSTEGKV*PSAWMDLDMATALG
Trigger: CCCTAAGGCTGTGGCCATATCTAGGTCCATCCAGGCTGATGGTCATACCTTGCCTTCAGTGCTACTCCTTCCTGTTCTTAGAACTGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460112.3
CDS GCA 90 bp CGAGGGCACTGTGCTGAGGATTATGATAGCAAACTGAACACCGAATaGATTGGTGGTGGTGGCACCGGCAGTTGTAGCAATTTGGCATCA +
Preference number: 5 (lower is better)
Translates to: RGHCAEDYDSKLNTE*IGGGGTGSCSNLAS
Trigger: TGATGCCAAATTGCTACAACTGCCGGTGCCACCACCACCAATGCATTCGGTGTTCAGTTTGCTATCATAATCCTCAGCACAGTGCCCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS GCA 90 bp CTTATTGGAGGCAAGAAATCACTGGAATGGAGTGCAAAGGATTCTTaGTCTGCTGGGACACTTTGTGAACCCTGTCTCGAGCCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: LIGGKKSLEWSAKDS*SAGTLCEPCLEPSR
Trigger: CCTGGAGGGCTCGAGACAGGGTTCACAAAGTGTCCCAGCAGAGCAAGAATCCTTTGCACTCCATTCCAGTGATTTCTTGCCTCCAATAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTCATCCCTCCAGCAGCTaGGCCACATGCCATGAGTGC +
Preference number: 5 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPHPSSS*ATCHEC
Trigger: GCACTCATGGCATGTGGCCAAGCTGCTGGAGGGATG...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTCCGCCTCACTGGAGGTaGTGGTGGGCCCCTGACTGC +
Preference number: 5 (lower is better)
Translates to: LGDGREMTEPFSISGDFFPPHWR*WWAPDC
Trigger: GCAGTCAGGGGCCCACCACAACCTCCAGTGAGGCGG...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGATCCAACAGCTTTGGTaGAGGCCTGCATCAGTAGAT +
Preference number: 5 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKIQQLW*RPASVD
Trigger: ATCTACTGATGCAGGCCTCAACCAAAGCTGTTGGAT...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCTCTGCAGAAGCCTCATaGAGTGGGTTGGAATCCACG +
Preference number: 5 (lower is better)
Translates to: LVRNRELSWITGQHLAITSAEAS*SGLEST
Trigger: CGTGGATTCCAACCCACTCAATGAGGCTTCTGCAGA...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGAGCATCATGCTTTTGTaGAAGAGCTTGTCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKSIMLL*KSLSLG
Trigger: CCCCAGAGACAAGCTCTTCAACAAAAGCATGATGCT...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCGCCTTCAATTCCTTGTaGTCACCTGGGTTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: LVRNRELSWITGQHLAITAFNSL*SPGLEG
Trigger: CCCTTCCAACCCAGGTGACAACAAGGAATTGAAGGC...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGAAATTGCTCGGTAGCTaGACAAGTCCAGTGCTGGGT +
Preference number: 5 (lower is better)
Translates to: RTGERDCISSNTGSVAAPKLLGS*TSPVLG
Trigger: ACCCAGCACTGGACTTGTCAAGCTACCGAGCAATTT...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTATTTTTCAAAGCATGTTaGAAGTCTCCAAGGAGGTCA +
Preference number: 5 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLFFKAC*KSPRRS
Trigger: TGACCTCCTTGGAGACTTCAAACATGCTTTGAAAAA...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGGAGTGCAAAGGATTCTaGCTCTGCTGGGACACTTTG +
Preference number: 5 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLECKGF*LCWDTL
Trigger: CAAAGTGTCCCAGCAGAGCAAGAATCCTTTGCACTC...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATAGGGCAGAATTGGCATaGATGTCCTCTAGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYRAELA*MSSSSP
Trigger: AGGGCTGCTAGAGGACATCAATGCCAATTCTGCCCT...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCCTTGGGTAGAAGCTaGTGGCTTCCCCAGGGTCTC +
Preference number: 5 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMPLGRS*WLPQGL
Trigger: GAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGG...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATAGCAAGTACTTGCCCTaGGCAACTGTGGGAAGGAGA +
Preference number: 5 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYSKYLP*ATVGRR
Trigger: TCTCCTTCCCACAGTTGCCAAGGGCAAGTACTTGCT...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCTATCAGCCATCATGCTaGCCTATTACCCATGGGGGC +
Preference number: 5 (lower is better)
Translates to: LVRNRELSWITGQHLAITYQPSC*PITHGG
Trigger: GCCCCCATGGGTAATAGGCAAGCATGATGGCTGATA...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTAAACCTGAACCTAACCTaGAAGGAGGCTTTTTATCTT +
Preference number: 5 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLNLNLT*KEAFYL
Trigger: AAGATAAAAAGCCTCCTTCAAGGTTAGGTTCAGGTT...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTATGGCAGAACCAGGATTaGAACACAGTTCATTCTAAT +
Preference number: 5 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLWQNQD*NTVHSN
Trigger: ATTAGAATGAACTGTGTTCAAATCCTGGTTCTGCCA...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS GCA 90 bp GATATTCACCAGCTCATCACCAGTCCTCATCTTCTGGGACAAAGCTaGCTTGCCTCCATCTTCAATCTTAGACACTGTGAGCGGCTCACA +
Preference number: 5 (lower is better)
Translates to: DIHQLITSPHLLGQS*LASIFNLRHCERLT
Trigger: TGTGAGCCGCTCACAGTGTCTAAGATTGAAGATGGAGGCAAGGCAGCTTTGTCCCAGAAGATGAGGACTGGTGATGAGCTGGTGAATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS CCA 90 bp AGCTTGAGAATCCGGAAGGAGCCTTTGATGAGAATGAGGGCCTCTTaGCGGGAGCCATATAATGGAGTGCCATTGATATTCACCAGCTCA +
Preference number: 5 (lower is better)
Translates to: SLRIRKEPLMRMRAS*REPYNGVPLIFTSS
Trigger: TGAGCTGGTGAATATCAATGGCACTCCATTATATGGCTCCCGCCAAGAGGCCCTCATTCTCATCAAAGGCTCCTTCCGGATTCTCAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000484922.1
CDS-3UTR CAA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCGCTCTCATAGGTGGCTaGGCCTGGTTGCTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSALIGG*AWLLQA
Trigger: AGCCTGGAGCAACCAGGCCAAGCCACCTATGAGAGC...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGATCCAACAGCTTTGGTaGAGGCCTGCATCAGTAGAT +
Preference number: 5 (lower is better)
Translates to: RTGERDCISSNTGSVAAPIQQLW*RPASVD
Trigger: ATCTACTGATGCAGGCCTCAACCAAAGCTGTTGGAT...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTGGGAGCTCCATCCCTTaGCTGCCCCTGGTATCAAGG +
Preference number: 5 (lower is better)
Translates to: RLDSRTRLCILLRSIPEIGSSIP*LPLVSR
Trigger: CCTTGATACCAGGGGCAGCAAAGGGATGGAGCTCCC...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGGCCAGAGGCAGAGGGTaGCTGGTTGGCCAATTCACT +
Preference number: 5 (lower is better)
Translates to: IRLDSRTRLCILLRSIPEARGRG*LVGQFT
Trigger: AGTGAATTGGCCAACCAGCAACCCTCTGCCTCTGGC...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGATCCGGCTGCACTCCTaGGGCTCGCTGTCCCCTTCT +
Preference number: 5 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKIRLHS*GSLSPS
Trigger: AGAAGGGGACAGCGAGCCCAAGGAGTGCAGCCGGAT...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGCTGAGCATCATGCTTTaGTTGAAGAGCTTGTCTCTG +
Preference number: 5 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKLSIML*LKSLSL
Trigger: CAGAGACAAGCTCTTCAACAAAAGCATGATGCTCAG...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTACAGCTGGAGCTCATaGGCTGGAAGTTTTGGTCTA +
Preference number: 5 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLYSWSS*AGSFGL
Trigger: TAGACCAAAACTTCCAGCCAATGAGCTCCAGCTGTA...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTAGGTCAAGAGAAGAAATaGCTCGGTAGCTTGACAAGT +
Preference number: 5 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVGQEKK*LGSLTS
Trigger: ACTTGTCAAGCTACCGAGCAATTTCTTCTCTTGACC...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCGAGTGCAAAGGATTCTaGCTCTGCTGGGACACTTTG +
Preference number: 5 (lower is better)
Translates to: LVRNRELSWITGQHLAITECKGF*LCWDTL
Trigger: CAAAGTGTCCCAGCAGAGCAAGAATCCTTTGCACTC...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATCCAAGTGACCCCTTATaGGAGGCAAGAAATCACTGG +
Preference number: 5 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYPSDPL*EARNHW
Trigger: CCAGTGATTTCTTGCCTCCAATAAGGGGTCACTTGG...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACCTGAGCCTGCTCAGGTaGAGATCCCAAGTGACCCCT +
Preference number: 5 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHLSLLR*RSQVTP
Trigger: AGGGGTCACTTGGGATCTCAACCTGAGCAGGCTCAG...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGCAGACGGCTTTTAAGTaGGCCTCCACCTCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: IRLDSRTRLCILLRSIPEQTAFK*ASTSSP
Trigger: TGGGGAGGAGGTGGAGGCCAACTTAAAAGCCGTCTG...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTATCAAATTCATTGGATTaGCAGACGGCTTTTAAGTTG +
Preference number: 5 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLSNSLD*QTAFKL
Trigger: CAACTTAAAAGCCGTCTGCAAATCCAATGAATTTGA...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACAACAGGTTGACCACTTaGTCCAGGTCCCCAACAAAC +
Preference number: 5 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDNRLTT*SRSPTN
Trigger: GTTTGTTGGGGACCTGGACAAAGTGGTCAACCTGTT...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCAAGCAAGTACTTGCCCTaGGCAACTGTGGGAAGGAGA +
Preference number: 5 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAASKYLP*ATVGRR
Trigger: TCTCCTTCCCACAGTTGCCAAGGGCAAGTACTTGCT...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAAAATGAAGGCACTTCCTaGGTTCTCTGTGCAGCAAGT +
Preference number: 5 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQNEGTS*VLCAAS
Trigger: ACTTGCTGCACAGAGAACCAAGGAAGTGCCTTCATT...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTGGCTTCCCCAGGGTCTCCTATCTTGTGTTTTAACCTaGTATCCTGCAACTTTCCTA +
Preference number: 5 (lower is better)
Translates to: HLAAAPLGRSLWLPQGLLSCVLT*YPATFL
Trigger: TAGGAAAGTTGCAGGATACAAGGTTAAAACACAAGA...TAGGAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATGAACAATTCAACGCCTaGGCACTTGCTTACCTAGCC +
Preference number: 5 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYEQFNA*ALAYLA
Trigger: GGCTAGGTAAGCAAGTGCCAAGGCGTTGAATTGTTC...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCATAACAGGGCAGCATTaGGCCATAACCCCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: LVRNRELSWITGQHLAITITGQH*AITPFL
Trigger: CAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTAT...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCCCTACCTTCTCAATCTaGGCTGGCTTGTGTAAGCCT +
Preference number: 5 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPPTFSI*AGLCKP
Trigger: AGGCTTACACAAGCCAGCCAAGATTGAGAAGGTAGG...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCTCAATTTGCTCATaGTTTGTCCTAGAGCCTGCT +
Preference number: 5 (lower is better)
Translates to: QGAKLDNRAAFGHNPLLAISICS*FVLEPA
Trigger: AGCAGGCTCTAGGACAAACAATGAGCAAATTGAGAT...GGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CTCCCTCTGTGCTTTCCCCTGCAAAGCTTGGGTGAGGCCCTGAAACTGGTGCCACTTCCTGGAATACATTaGAGTCTAATCTTTGAGGTT +
Preference number: 5 (lower is better)
Translates to: LPLCFPLQSLGEALKLVPLPGIH*SLIFEV
Trigger: AACCTCAAAGATTAGACTCAAATGTATTCCAGGAAG...TGGCACCAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAAGCACAGAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS TCA 90 bp TTTCTTCTGTCTGCAAAAGGCAAGAGGATGGCATCCTCCCCAGCTTaGGCAGTAGAAGCCTTCAATTCCTTGTTGTCACCTGGGTTGGAA +
Preference number: 5 (lower is better)
Translates to: FLLSAKGKRMASSPA*AVEAFNSLLSPGLE
Trigger: TTCCAACCCAGGTGACAACAAGGAATTGAAGGCTTCTACTGCTCAAGCTGGGGAGGATGCCATCCTCTTGCCTTTTGCAGACAGAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS TCA 90 bp TTTGAAGTCTCCAAGGAGGTCAAGAGAAGAAATTGCTCGGTAGCTTaGCAAGTCCAGTGCTGGGTTCTCAAGGCAAGGATGGAAAGGGGT +
Preference number: 5 (lower is better)
Translates to: FEVSKEVKRRNCSVA*QVQCWVLKARMERG
Trigger: ACCCCTTTCCATCCTTGCCTTGAGAACCCAGCACTGGACTTGTCAAGCTACCGAGCAATTTCTTCTCTTGACCTCCTTGGAGACTTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 90 bp GGAGTGCCATTGATATTCACCAGCTCATCACCAGTCCTCATCTTCTaGGACAAAGCTGCCTTGCCTCCATCTTCAATCTTAGACACTGTG +
Preference number: 5 (lower is better)
Translates to: GVPLIFTSSSPVLIF*DKAALPPSSILDTV
Trigger: CACAGTGTCTAAGATTGAAGATGGAGGCAAGGCAGCTTTGTCCCAGAAGATGAGGACTGGTGATGAGCTGGTGAATATCAATGGCACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS CCA 90 bp CAGGTTGAGATCCCAAGTGACCCCTTATTGGAGGCAAGAAATCACTaGAATGGAGTGCAAAGGATTCTTGCTCTGCTGGGACACTTTGTG +
Preference number: 5 (lower is better)
Translates to: QVEIPSDPLLEARNH*NGVQRILALLGHFV
Trigger: CACAAAGTGTCCCAGCAGAGCAAGAATCCTTTGCACTCCATTCCAGTGATTTCTTGCCTCCAATAAGGGGTCACTTGGGATCTCAACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGCACACGTCACTTGTGTaGCAGCCAGAATGCCAGGAC +
Preference number: 5 (lower is better)
Translates to: IRLDSRTRLCILLRSIPEHTSLV*QPECQD
Trigger: GTCCTGGCATTCTGGCTGCAACACAAGTGACGTGTG...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGGCACACACACGTCACTaGTGTTGCAGCCAGAATGCC +
Preference number: 5 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMAHTRH*CCSQNA
Trigger: GGCATTCTGGCTGCAACACAAGTGACGTGTGTGTGC...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGGCACACACACGTCACTaGTGTTGCAGCCAGAATGCC +
Preference number: 5 (lower is better)
Translates to: IRLDSRTRLCILLRSIPEAHTRH*CCSQNA
Trigger: GGCATTCTGGCTGCAACACAAGTGACGTGTGTGTGC...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp ATGAAACATATCAGCCTCATCCTCCCAATACAGGACATCTCAATTTGCTCATTGGCTCTCATAGGTGGCTaGGCCTGGTTGCTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: MKHISLILPIQDISICSLALIGG*AWLLQA
Trigger: AGCCTGGAGCAACCAGGCCAAGCCACCTATGAGAGC...CAATGAGCAAATTGAGATGTCCTGTATTGGGAGGATGAGGCTGATATGTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTCTCTCCATTGAGGAGTaGGGCTCTGGAGGCCTGAAG +
Preference number: 5 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSLSIEE*GSGGLK
Trigger: CTTCAGGCCTCCAGAGCCCAACTCCTCAATGGAGAG...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTGCCCTCACTTGTCACTaGGTCATGCCCACTGAGGCA +
Preference number: 5 (lower is better)
Translates to: RLDSRTRLCILLRSIPEIALTCH*VMPTEA
Trigger: TGCCTCAGTGGGCATGACCAAGTGACAAGTGAGGGC...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCCTGGTCTTTCTTTCTTaGCTGGACTGGTCATGGGTT +
Preference number: 5 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPLVFLS*LDWSWV
Trigger: AACCCATGACCAGTCCAGCAAAGAAAGAAAGACCAG...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTATGTGGGGGACTGCTTaGGCTCTGGTGTCCCAAAAC +
Preference number: 5 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPMWGTA*ALVSQN
Trigger: GTTTTGGGACACCAGAGCCAAAGCAGTCCCCCACAT...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCACTGGCTGCTCTGCTaGTTCTGTTTGGGTCCAGGA +
Preference number: 5 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMHWLLC*FCLGPG
Trigger: TCCTGGACCCAAACAGAACAAGCAGAGCAGCCAGTG...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGCACTGGCTGCTCTGCTaGTTCTGTTTGGGTCCAGGA +
Preference number: 5 (lower is better)
Translates to: IRLDSRTRLCILLRSIPEHWLLC*FCLGPG
Trigger: TCCTGGACCCAAACAGAACAAGCAGAGCAGCCAGTG...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTGCAGAGGGTTGCTGGTaGGCCAATTCACTGGCTGCT +
Preference number: 5 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSAEGCW*ANSLAA
Trigger: AGCAGCCAGTGAATTGGCCAACCAGCAACCCTCTGC...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCGCCAGAGGCAGAGGGTaGCTGGTTGGCCAATTCACT +
Preference number: 5 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSARGRG*LVGQFT
Trigger: AGTGAATTGGCCAACCAGCAACCCTCTGCCTCTGGC...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCATGGCTCTCAGGGGCTaGGCTGAGGCACTCGGAAGA +
Preference number: 5 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGMALRG*AEALGR
Trigger: TCTTCCGAGTGCCTCAGCCAAGCCCCTGAGAGCCAT...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTTTGTTGTCACCTGGGTaGGAAGGGCCTTCCATGGCT +
Preference number: 5 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPLLSPG*EGPSMA
Trigger: AGCCATGGAAGGCCCTTCCAACCCAGGTGACAACAA...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCGAAGCCTTCAATTCCTaGTTGTCACCTGGGTTGGAA +
Preference number: 5 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPEAFNS*LSPGLE
Trigger: TTCCAACCCAGGTGACAACAAGGAATTGAAGGCTTC...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCAAAATTGCTCGGTAGCTaGACAAGTCCAGTGCTGGGT +
Preference number: 5 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAAKLLGS*TSPVLG
Trigger: ACCCAGCACTGGACTTGTCAAGCTACCGAGCAATTT...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACAGGACCTCCTCAGGATaGAGAGCACAGGAACCAGAG +
Preference number: 5 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHRTSSG*RAQEPE
Trigger: CTCTGGTTCCTGTGCTCTCAATCCTGAGGAGGTCCT...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCTCTCCCTGAGACATTaGAGTTGCTCTTCCCCGAGC +
Preference number: 5 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMLSLRH*SCSSPS
Trigger: GCTCGGGGAAGAGCAACTCAAATGTCTCAGGGAGAG...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGTTTCCCCTGCAAAGCTaGGGTGAGGCCCTGAAACTG +
Preference number: 5 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMFPLQS*GEALKL
Trigger: CAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAA...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp GCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCCCTTCTTGCCATCGTCATCTCAATTTGCTCATaGTTTGTCCTAGAGCCTGCT +
Preference number: 5 (lower is better)
Translates to: AKLDNRAAFGHNPLLAIVISICS*FVLEPA
Trigger: AGCAGGCTCTAGGACAAACAATGAGCAAATTGAGAT...GACGATGGCAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACGGCCTGTATAAGTATTaGACGGGAGACAGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDGLYKY*TGDSRS
Trigger: ACTTCTGCTGTCTCCCGTCAAATACTTATACAGGCC...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGTATAATGGAGTGCCATaGATATTCACCAGCTCATCA +
Preference number: 5 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKYNGVP*IFTSSS
Trigger: TGATGAGCTGGTGAATATCAATGGCACTCCATTATA...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCTCCTGACAATCAGCTaGAGAATCCGGAAGGAGCCT +
Preference number: 5 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMLLTIS*RIRKEP
Trigger: AGGCTCCTTCCGGATTCTCAAGCTGATTGTCAGGAG...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCCACACGTCACTTGTGTaGCAGCCAGAATGCCAGGAC +
Preference number: 5 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSHTSLV*QPECQD
Trigger: GTCCTGGCATTCTGGCTGCAACACAAGTGACGTGTG...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTGCACACACACGTCACTaGTGTTGCAGCCAGAATGCC +
Preference number: 5 (lower is better)
Translates to: RLDSRTRLCILLRSIPEIAHTRH*CCSQNA
Trigger: GGCATTCTGGCTGCAACACAAGTGACGTGTGTGTGC...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTAGTTGGCCCTGGGCCTaGCATGATGCAGTCTGTAGA +
Preference number: 5 (lower is better)
Translates to: RLDSRTRLCILLRSIPEISWPWA*HDAVCR
Trigger: TCTACAGACTGCATCATGCAAGGCCCAGGGCCAACT...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTGGGGATCCAACAGCTTaGGTTGAGGCCTGCATCAGT +
Preference number: 5 (lower is better)
Translates to: RLDSRTRLCILLRSIPEIGDPTA*VEACIS
Trigger: ACTGATGCAGGCCTCAACCAAAGCTGTTGGATCCCC...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTGCCTCATTGAGTGGGTaGGAATCCACGCTGGAAGCT +
Preference number: 5 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSASLSG*ESTLEA
Trigger: AGCTTCCAGCGTGGATTCCAACCCACTCAATGAGGC...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTTCTGCAGAAGCCTCATaGAGTGGGTTGGAATCCACG +
Preference number: 5 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPSAEAS*SGLEST
Trigger: CGTGGATTCCAACCCACTCAATGAGGCTTCTGCAGA...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACTCTGCAGAAGCCTCATaGAGTGGGTTGGAATCCACG +
Preference number: 5 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHSAEAS*SGLEST
Trigger: CGTGGATTCCAACCCACTCAATGAGGCTTCTGCAGA...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAAAGACCTGTCATCCACTaGTCTGGTCTTTCTTTCTTT +
Preference number: 5 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQRPVIH*SGLSFF
Trigger: AAAGAAAGAAAGACCAGACAAGTGGATGACAGGTCT...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACCTCTGCTTGTTCTGTTaGGGTCCAGGAAACCTTTTT +
Preference number: 5 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDLCLFC*GPGNLF
Trigger: AAAAAGGTTTCCTGGACCCAAACAGAACAAGCAGAG...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGACAGTCCGTGGCTTGTaGAACAAGGGAGCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKTVRGL*NKGARG
Trigger: GCCTCTGGCTCCCTTGTTCAACAAGCCACGGACTGT...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTAGAACAGTCCGTGGCTaGTTGAACAAGGGAGCCAGA +
Preference number: 5 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPRTVRG*LNKGAR
Trigger: TCTGGCTCCCTTGTTCAACAAGCCACGGACTGTTCT...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAAATTTCATTACGCAGATaGGTAGCAAAACGCTCACTC +
Preference number: 5 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQISLRR*VAKRSL
Trigger: GAGTGAGCGTTTTGCTACCAATCTGCGTAATGAAAT...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGATTTCATTACGCAGATaGGTAGCAAAACGCTCACTC +
Preference number: 5 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLISLRR*VAKRSL
Trigger: GAGTGAGCGTTTTGCTACCAATCTGCGTAATGAAAT...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGGCCTTCAATTCCTTGTaGTCACCTGGGTTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMAFNSL*SPGLEG
Trigger: CCCTTCCAACCCAGGTGACAACAAGGAATTGAAGGC...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCAGAAGCCTTCAATTCCTaGTTGTCACCTGGGTTGGAA +
Preference number: 5 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAAEAFNS*LSPGLE
Trigger: TTCCAACCCAGGTGACAACAAGGAATTGAAGGCTTC...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATGGTCAAGAGAAGAAATaGCTCGGTAGCTTGACAAGT +
Preference number: 5 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYGQEKK*LGSLTS
Trigger: ACTTGTCAAGCTACCGAGCAATTTCTTCTCTTGACC...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTCTGTACTTCTCCCAGTaGGGAGGAGGAGGGCGAGGA +
Preference number: 5 (lower is better)
Translates to: LGDGREMTEPFSISGDFFLYFSQ*GGGGRG
Trigger: TCCTCGCCCTCCTCCTCCCAACTGGGAGAAGTACAG...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAGGACCTCCTCAGGATaGAGAGCACAGGAACCAGAG +
Preference number: 5 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSRTSSG*RAQEPE
Trigger: CTCTGGTTCCTGTGCTCTCAATCCTGAGGAGGTCCT...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGAGGGCAGAATTGGCATaGATGTCCTCTAGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: IRLDSRTRLCILLRSIPERAELA*MSSSSP
Trigger: AGGGCTGCTAGAGGACATCAATGCCAATTCTGCCCT...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGACCAACTTCTCCTGGTaGGCCTCTGAATCGATGCTG +
Preference number: 5 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMTNFSW*ASESML
Trigger: CAGCATCGATTCAGAGGCCAACCAGGAGAAGTTGGT...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCTGCTCTTCCCCGAGCTaGATCTTCTCCTCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSCSSPS*IFSSSS
Trigger: AGAGCTGGAGGAGAAGATCAAGCTCGGGGAAGAGCA...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTTGCTCTTCCCCGAGCTaGATCTTCTCCTCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSCSSPS*IFSSSS
Trigger: AGAGCTGGAGGAGAAGATCAAGCTCGGGGAAGAGCA...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTCCCTTGGGTAGAAGCTaGTGGCTTCCCCAGGGTCTC +
Preference number: 5 (lower is better)
Translates to: LGDGREMTEPFSISGDFFPLGRS*WLPQGL
Trigger: GAGACCCTGGGGAAGCCACAAGCTTCTACCCAAGGG...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCTTTCCCCTGCAAAGCTaGGGTGAGGCCCTGAAACTG +
Preference number: 5 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSFPLQS*GEALKL
Trigger: CAGTTTCAGGGCCTCACCCAAGCTTTGCAGGGGAAA...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTCCTCTTCCCCTGAACTaGCTGCTGGGAAAGGTAAGG +
Preference number: 5 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSPLPLN*LLGKVR
Trigger: CCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGG...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACACTGGTGTCAGGGCCTaGGCAACAGCAGCAGTTTTA +
Preference number: 5 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHTGVRA*ATAAVL
Trigger: TAAAACTGCTGCTGTTGCCAAGGCCCTGACACCAGT...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR CAA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGACTGGTGTCAGGGCCTaGGCAACAGCAGCAGTTTTA +
Preference number: 5 (lower is better)
Translates to: IRLDSRTRLCILLRSIPETGVRA*ATAAVL
Trigger: TAAAACTGCTGCTGTTGCCAAGGCCCTGACACCAGT...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCCAGGCCTTGGCTGGGTaGTGTGATACCAAGGATTGG +
Preference number: 5 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSQALAG*CDTKDW
Trigger: CCAATCCTTGGTATCACACAACCCAGCCAAGGCCTG...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR CAA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGCATGAAGGTGTGAGATaGGACTATCAGCTAGAAGTA +
Preference number: 5 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLHEGVR*DYQLEV
Trigger: TACTTCTAGCTGATAGTCCAATCTCACACCTTCATG...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGACCACAATGGATATCTaGAGTAGAAGGAGGATAGTT +
Preference number: 5 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKTTMDI*SRRRIV
Trigger: AACTATCCTCCTTCTACTCAAGATATCCATTGTGGT...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TCAACAAGTCAGTACTTCCCATGCTGTAATATGTTCATGAATCTCCTGGAAATCATGCTCAGAGCCCTGTaGGCTGGATTCAGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: STSQYFPCCNMFMNLLEIMLRAL*AGFRRL
Trigger: CAGCCTCCTGAATCCAGCCAACAGGGCTCTGAGCAT...GATTTCCAGGAGATTCATGAACATATTACAGCATGGGAAGTACTGACTTGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR CAA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTATGCTCAGAGCCCTGTaGGCTGGATTCAGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: LGDGREMTEPFSISGDFFMLRAL*AGFRRL
Trigger: CAGCCTCCTGAATCCAGCCAACAGGGCTCTGAGCAT...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATAGACCTGTCATCCACTaGTCTGGTCTTTCTTTCTTT +
Preference number: 5 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYRPVIH*SGLSFF
Trigger: AAAGAAAGAAAGACCAGACAAGTGGATGACAGGTCT...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCCACTGGCTGCTCTGCTaGTTCTGTTTGGGTCCAGGA +
Preference number: 5 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGHWLLC*FCLGPG
Trigger: TCCTGGACCCAAACAGAACAAGCAGAGCAGCCAGTG...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp ATGAAACATATCAGCCTCATCCTCCCAATACAGGACATCTCAATTTGCTCATTGGGCATCCTCCCCAGCTaGAGCAGTAGAAGCCTTCAA +
Preference number: 5 (lower is better)
Translates to: MKHISLILPIQDISICSLGILPS*SSRSLQ
Trigger: TTGAAGGCTTCTACTGCTCAAGCTGGGGAGGATGCC...CAATGAGCAAATTGAGATGTCCTGTATTGGGAGGATGAGGCTGATATGTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GCACTTCCTTGGTTCTCTGTGCAGCAAGTACTTGCCCTTGGCAACTGTGGGAAGTTTCTAGACCTTTGCTaGCAAAACATTCTGAGTAAG +
Preference number: 5 (lower is better)
Translates to: ALPWFSVQQVLALGNCGKFLDLC*QNILSK
Trigger: CTTACTCAGAATGTTTTGCAAGCAAAGGTCTAGAAA...CTTCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAGAGAACCAAGGAAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CCTGGGGTAGGCACCTGCGGTAACCCCCAGCAATGTAAAGGAAAGATGAAACAATTTTTCAAAGCATGTTaGAAGTCTCCAAGGAGGTCA +
Preference number: 5 (lower is better)
Translates to: PGVGTCGNPQQCKGKMKQFFKAC*KSPRRS
Trigger: TGACCTCCTTGGAGACTTCAAACATGCTTTGAAAAA...TTGTTTCATCTTTCCTTTACATTGCTGGGGGTTACCGCAGGTGCCTACCCCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp ATGAAACATATCAGCCTCATCCTCCCAATACAGGACATCTCAATTTGCTCATTGAGGACCTCCTCAGGATaGAGAGCACAGGAACCAGAG +
Preference number: 5 (lower is better)
Translates to: MKHISLILPIQDISICSLRTSSG*RAQEPE
Trigger: CTCTGGTTCCTGTGCTCTCAATCCTGAGGAGGTCCT...CAATGAGCAAATTGAGATGTCCTGTATTGGGAGGATGAGGCTGATATGTTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGGAGTGCAAAGGATTCTaGCTCTGCTGGGACACTTTG +
Preference number: 5 (lower is better)
Translates to: IRLDSRTRLCILLRSIPEECKGF*LCWDTL
Trigger: CAAAGTGTCCCAGCAGAGCAAGAATCCTTTGCACTC...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCAAGTGACCCCTTATaGGAGGCAAGAAATCACTGG +
Preference number: 5 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMPSDPL*EARNHW
Trigger: CCAGTGATTTCTTGCCTCCAATAAGGGGTCACTTGG...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp AGGGCTAAGAGTAGGCCTCTTCCCCTGAACTTGCTGCTGGGAAAGGTAAGGGTATCAAATTCATTGGATTaGCAGACGGCTTTTAAGTTG +
Preference number: 5 (lower is better)
Translates to: RAKSRPLPLNLLLGKVRVSNSLD*QTAFKL
Trigger: CAACTTAAAAGCCGTCTGCAAATCCAATGAATTTGA...TACCCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGGCCTACTCTTAGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGTGCTCTTCCCCGAGCTaGATCTTCTCCTCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKCSSPS*IFSSSS
Trigger: AGAGCTGGAGGAGAAGATCAAGCTCGGGGAAGAGCA...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTAGCAAGTACTTGCCCTaGGCAACTGTGGGAAGGAGA +
Preference number: 5 (lower is better)
Translates to: RLDSRTRLCILLRSIPEISKYLP*ATVGRR
Trigger: TCTCCTTCCCACAGTTGCCAAGGGCAAGTACTTGCT...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGCCTCTTCCCCTGAACTaGCTGCTGGGAAAGGTAAGG +
Preference number: 5 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKPLPLN*LLGKVR
Trigger: CCTTACCTTTCCCAGCAGCAAGTTCAGGGGAAGAGG...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp AGAACAGGGGAGAGAGACTGCATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCTGTCAGATTCTACTaGGGCATTTACAGCTATATC +
Preference number: 5 (lower is better)
Translates to: RTGERDCISSNTGSVAAPSVRFY*GIYSYI
Trigger: GATATAGCTGTAAATGCCCAAGTAGAATCTGACAGA...CGGTGCTGCAACACTGCCAGTATTACTTGAGATGCAGTCTCTCTCCCCTGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCCATGAAGGTGTGAGATaGGACTATCAGCTAGAAGTA +
Preference number: 5 (lower is better)
Translates to: LVRNRELSWITGQHLAITHEGVR*DYQLEV
Trigger: TACTTCTAGCTGATAGTCCAATCTCACACCTTCATG...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS CCA 90 bp GAGTTTCTGACTGAAGGGGTGACATGGAATGATATGATTGGTCTGTaGCATGATATGGTTGGTCTGCGGAATGATATGATTGGTCCATGG +
Preference number: 5 (lower is better)
Translates to: EFLTEGVTWNDMIGL*HDMVGLRNDMIGPW
Trigger: CCATGGACCAATCATATCATTCCGCAGACCAACCATATCATGCCACAGACCAATCATATCATTCCATGTCACCCCTTCAGTCAGAAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 90 bp CAAAACATTCTGAGTAAGTGGGAGTTTCTGACTGAAGGGGTGACATaGAATGATATGATTGGTCTGTGGCATGATATGGTTGGTCTGCGG +
Preference number: 5 (lower is better)
Translates to: QNILSKWEFLTEGVT*NDMIGLWHDMVGLR
Trigger: CCGCAGACCAACCATATCATGCCACAGACCAATCATATCATTCCATGTCACCCCTTCAGTCAGAAACTCCCACTTACTCAGAATGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCCTCTGTCACAGGCTTTaGGGGATCCAACAGCTTTGG +
Preference number: 5 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGLCHRL*GIQQLW
Trigger: CCAAAGCTGTTGGATCCCCAAAAGCCTGTGACAGAG...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTGCCTCATTGAGTGGGTaGGAATCCACGCTGGAAGCT +
Preference number: 5 (lower is better)
Translates to: LGDGREMTEPFSISGDFFASLSG*ESTLEA
Trigger: AGCTTCCAGCGTGGATTCCAACCCACTCAATGAGGC...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACCTGGTCTTTCTTTCTTaGCTGGACTGGTCATGGGTT +
Preference number: 5 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHLVFLS*LDWSWV
Trigger: AACCCATGACCAGTCCAGCAAAGAAAGAAAGACCAG...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCAATTTCATTACGCAGATaGGTAGCAAAACGCTCACTC +
Preference number: 5 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAAISLRR*VAKRSL
Trigger: GAGTGAGCGTTTTGCTACCAATCTGCGTAATGAAAT...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCCTTTTGTTGAAGAGCTaGTCTCTGGGGCTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGLLLKS*SLGLGG
Trigger: ACCTCCCAGCCCCAGAGACAAGCTCTTCAACAAAAG...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTTTGTTGTCACCTGGGTaGGAAGGGCCTTCCATGGCT +
Preference number: 5 (lower is better)
Translates to: LGDGREMTEPFSISGDFFLLSPG*EGPSMA
Trigger: AGCCATGGAAGGCCCTTCCAACCCAGGTGACAACAA...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGTACAGCTGGAGCTCATaGGCTGGAAGTTTTGGTCTA +
Preference number: 5 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMYSWSS*AGSFGL
Trigger: TAGACCAAAACTTCCAGCCAATGAGCTCCAGCTGTA...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGTTTCTAGACCTTTGCTaGCAAAACATTCTGAGTAAG +
Preference number: 5 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLFLDLC*QNILSK
Trigger: CTTACTCAGAATGTTTTGCAAGCAAAGGTCTAGAAA...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GAGAGTGTGGTTCTAAGATCACACCTTGCTGCAGCTCCCTTGGGTAGAAGCTTGGGCAGTTGTAGCAATTaGGCATCATATTTCTCTTTA +
Preference number: 5 (lower is better)
Translates to: ESVVLRSHLAAAPLGRSLGSCSN*ASYFSL
Trigger: TAAAGAGAAATATGATGCCAAATTGCTACAACTGCC...CAAGCTTCTACCCAAGGGAGCTGCAGCAAGGTGTGATCTTAGAACCACACTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTAACAGGTTGACCACTTaGTCCAGGTCCCCAACAAAC +
Preference number: 5 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSNRLTT*SRSPTN
Trigger: GTTTGTTGGGGACCTGGACAAAGTGGTCAACCTGTT...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTCTTGCTGCAGCTCCCTaGGGTAGAAGCTTGTGGCTT +
Preference number: 5 (lower is better)
Translates to: LGDGREMTEPFSISGDFFLAAAP*GRSLWL
Trigger: AAGCCACAAGCTTCTACCCAAGGGAGCTGCAGCAAG...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTCTGTGCAGCAAGTACTaGCCCTTGGCAACTGTGGGA +
Preference number: 5 (lower is better)
Translates to: LGDGREMTEPFSISGDFFLCSKY*PLATVG
Trigger: TCCCACAGTTGCCAAGGGCAAGTACTTGCTGCACAG...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTAATGAAGGCACTTCCTaGGTTCTCTGTGCAGCAAGT +
Preference number: 5 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPNEGTS*VLCAAS
Trigger: ACTTGCTGCACAGAGAACCAAGGAAGTGCCTTCATT...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCGAGCTCCCAGCTACCTaGAGTTTTGGTTCCCTTGAG +
Preference number: 5 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGELPAT*SFGSLE
Trigger: CTCAAGGGAACCAAAACTCAAGGTAGCTGGGAGCTC...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTATAACAGGGCAGCATTaGGCCATAACCCCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: RLDSRTRLCILLRSIPEIITGQH*AITPFL
Trigger: CAAGAAGGGGGTTATGGCCAAATGCTGCCCTGTTAT...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp ATCTCAAGTAATACTGGCAGTGTTGCAGCACCGTCACACACAATGAGACTGCCCACAGGACATCTCAATTaGCTCATTGTTTGTCCTAGA +
Preference number: 5 (lower is better)
Translates to: ISSNTGSVAAPSHTMRLPTGHLN*LIVCPR
Trigger: TCTAGGACAAACAATGAGCAAATTGAGATGTCCTGT...GGGCAGTCTCATTGTGTGTGACGGTGCTGCAACACTGCCAGTATTACTTGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACAACCTGAACCTAACCTaGAAGGAGGCTTTTTATCTT +
Preference number: 5 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDNLNLT*KEAFYL
Trigger: AAGATAAAAAGCCTCCTTCAAGGTTAGGTTCAGGTT...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATACCACAATGGATATCTaGAGTAGAAGGAGGATAGTT +
Preference number: 5 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYTTMDI*SRRRIV
Trigger: AACTATCCTCCTTCTACTCAAGATATCCATTGTGGT...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS GCA 90 bp CAGAACAATAAATGCAAGGATCATGGACTAGAGCTCCTTGAACACTaGAGGAGTAAGAGCAGGTCCTGTGGTAATCAAAATCACCACAGT +
Preference number: 5 (lower is better)
Translates to: QNNKCKDHGLELLEH*RSKSRSCGNQNHHS
Trigger: ACTGTGGTGATTTTGATTACCACAGGACCTGCTCTTACTCCTGCAGTGTTCAAGGAGCTCTAGTCCATGATCCTTGCATTTATTGTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp AGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGATTCTGGTCTTTCTTTCTTaGCTGGACTGGTCATGGGTT +
Preference number: 5 (lower is better)
Translates to: RLDSRTRLCILLRSIPEILVFLS*LDWSWV
Trigger: AACCCATGACCAGTCCAGCAAAGAAAGAAAGACCAG...AATCTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTCTCTGCTTGTTCTGTTaGGGTCCAGGAAACCTTTTT +
Preference number: 5 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPLCLFC*GPGNLF
Trigger: AAAAAGGTTTCCTGGACCCAAACAGAACAAGCAGAG...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACCTCTGCTTGTTCTGTTaGGGTCCAGGAAACCTTTTT +
Preference number: 5 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHLCLFC*GPGNLF
Trigger: AAAAAGGTTTCCTGGACCCAAACAGAACAAGCAGAG...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTCTTTTGTTGAAGAGCTaGTCTCTGGGGCTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: LGDGREMTEPFSISGDFFLLLKS*SLGLGG
Trigger: ACCTCCCAGCCCCAGAGACAAGCTCTTCAACAAAAG...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAGCATCATGCTTTTGTaGAAGAGCTTGTCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSSIMLL*KSLSLG
Trigger: CCCCAGAGACAAGCTCTTCAACAAAAGCATGATGCT...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp GGGGTAGTGAGAGACATCCAGGGTAGAGGGCTGGAACAAACTGCTAATTGCTATGATGTAGATAAGGATTaGCTACTCTCTTCAAAGAAC +
Preference number: 5 (lower is better)
Translates to: GVVRDIQGRGLEQTANCYDVDKD*LLSSKN
Trigger: GTTCTTTGAAGAGAGTAGCAAATCCTTATCTACATC...ATAGCAATTAGCAGTTTGTTCCAGCCCTCTACCCTGGATGTCTCTCACTACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACGAATTTTCTAGACCTTaGCTTGCAAAACATTCTGAG +
Preference number: 5 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDEFSRP*LAKHSE
Trigger: CTCAGAATGTTTTGCAAGCAAAGGTCTAGAAAATTC...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TTAGTGAGGAACAGGGAGCTAAGCTGGATAACAGGGCAGCATTTGGCCATAACCGGCAGTTGTAGCAATTaGGCATCATATTTCTCTTTA +
Preference number: 5 (lower is better)
Translates to: LVRNRELSWITGQHLAITGSCSN*ASYFSL
Trigger: TAAAGAGAAATATGATGCCAAATTGCTACAACTGCC...GGTTATGGCCAAATGCTGCCCTGTTATCCAGCTTAGCTCCCTGTTCCTCACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp AAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCCTGTTATTGGATTCCATTaGTCCCCAGGAAATTCCTGC +
Preference number: 5 (lower is better)
Translates to: KFIQAGSCEQHEKSKNMPVIGFH*SPGNSC
Trigger: GCAGGAATTTCCTGGGGACAAATGGAATCCAATAAC...AGGCATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGGTTATTGGATTCCATTaGTCCCCAGGAAATTCCTGC +
Preference number: 5 (lower is better)
Translates to: IRLDSRTRLCILLRSIPEVIGFH*SPGNSC
Trigger: GCAGGAATTTCCTGGGGACAAATGGAATCCAATAAC...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGGTCAAGAGAAGAAATaGCTCGGTAGCTTGACAAGT +
Preference number: 5 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHGQEKK*LGSLTS
Trigger: ACTTGTCAAGCTACCGAGCAATTTCTTCTCTTGACC...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGTGGGTCTCATCACCTTaGCTAAAGAGCTCCCTCCTA +
Preference number: 5 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKWVSSP*LKSSLL
Trigger: TAGGAGGGAGCTCTTTAGCAAAGGTGATGAGACCCA...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTACCAACTTCTCCTGGTaGGCCTCTGAATCGATGCTG +
Preference number: 5 (lower is better)
Translates to: LGDGREMTEPFSISGDFFTNFSW*ASESML
Trigger: CAGCATCGATTCAGAGGCCAACCAGGAGAAGTTGGT...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCATCTGTCAGATTCTACTaGGGCATTTACAGCTATATC +
Preference number: 5 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAASVRFY*GIYSYI
Trigger: GATATAGCTGTAAATGCCCAAGTAGAATCTGACAGA...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CCATCATGCTTGCCTATTACCCATGGGGGCCTGTATAAGTATTTGACGGGAGACCTGAGATTACACCTATaGTTGACTTTTTCTGCATTC +
Preference number: 5 (lower is better)
Translates to: PSCLPITHGGLYKYLTGDLRLHL*LTFSAF
Trigger: GAATGCAGAAAAAGTCAACAATAGGTGTAATCTCAG...GTCTCCCGTCAAATACTTATACAGGCCCCCATGGGTAATAGGCAAGCATGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGATCTTTGAGGTTGCCTaGGAGAGCAGATCACCAAGG +
Preference number: 5 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKIFEVA*ESRSPR
Trigger: CCTTGGTGATCTGCTCTCCAAGGCAACCTCAAAGAT...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGAGACCTGTCATCCACTaGTCTGGTCTTTCTTTCTTT +
Preference number: 5 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMRPVIH*SGLSFF
Trigger: AAAGAAAGAAAGACCAGACAAGTGGATGACAGGTCT...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCAGCATCATGCTTTTGTaGAAGAGCTTGTCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGSIMLL*KSLSLG
Trigger: CCCCAGAGACAAGCTCTTCAACAAAAGCATGATGCT...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTCTGAGCATCATGCTTTaGTTGAAGAGCTTGTCTCTG +
Preference number: 5 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSLSIML*LKSLSL
Trigger: CAGAGACAAGCTCTTCAACAAAAGCATGATGCTCAG...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp ACAGAATTCAAGATTGGAAGAAGTCTAGAAAGAATGGCTTACCTTCGATCAGGCGAAGCCTTCAATTCCTaGTTGTCACCTGGGTTGGAA +
Preference number: 5 (lower is better)
Translates to: TEFKIGRSLERMAYLRSGEAFNS*LSPGLE
Trigger: TTCCAACCCAGGTGACAACAAGGAATTGAAGGCTTC...GCCTGATCGAAGGTAAGCCATTCTTTCTAGACTTCTTCCAATCTTGAATTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAGAAGAGCAAGAATATGCATTGGCTGGAAGTTTaGGTCTATAGGTTTTGGTCT +
Preference number: 5 (lower is better)
Translates to: PKFIQAGSCEQHEKSKNMHWLEV*VYRFWS
Trigger: AGACCAAAACCTATAGACCAAAACTTCCAGCCAATG...CATATTCTTGCTCTTCTCGTGTTGCTCACAACTACCTGCCTGGATGAATTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGCATTGGCTGGAAGTTTaGGTCTATAGGTTTTGGTCT +
Preference number: 5 (lower is better)
Translates to: IRLDSRTRLCILLRSIPEHWLEV*VYRFWS
Trigger: AGACCAAAACCTATAGACCAAAACTTCCAGCCAATG...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TGGTGTCCTAGTACAAAGCAGAATGAAGGCACTTCCTTGGTTCTCTGTGCAGCATCAAATTCATTGGATTaGCAGACGGCTTTTAAGTTG +
Preference number: 5 (lower is better)
Translates to: WCPSTKQNEGTSLVLCAASNSLD*QTAFKL
Trigger: CAACTTAAAAGCCGTCTGCAAATCCAATGAATTTGA...TGCTGCACAGAGAACCAAGGAAGTGCCTTCATTCTGCTTTGTACTAGGACACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTCCTGAGACATTTGAGTaGCTCTTCCCCGAGCTTGAT +
Preference number: 5 (lower is better)
Translates to: LGDGREMTEPFSISGDFFPETFE*LFPELD
Trigger: ATCAAGCTCGGGGAAGAGCAACTCAAATGTCTCAGG...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGGGCCTGTATAAGTATTaGACGGGAGACAGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKGLYKY*TGDSRS
Trigger: ACTTCTGCTGTCTCCCGTCAAATACTTATACAGGCC...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACTATAATGGAGTGCCATaGATATTCACCAGCTCATCA +
Preference number: 5 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHYNGVP*IFTSSS
Trigger: TGATGAGCTGGTGAATATCAATGGCACTCCATTATA...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp ATGAAACATATCAGCCTCATCCTCCCAATACAGGACATCTCAATTTGCTCATTGCTGAGCATCATGCTTTaGTTGAAGAGCTTGTCTCTG +
Preference number: 5 (lower is better)
Translates to: MKHISLILPIQDISICSLLSIML*LKSLSL
Trigger: CAGAGACAAGCTCTTCAACAAAAGCATGATGCTCAG...CAATGAGCAAATTGAGATGTCCTGTATTGGGAGGATGAGGCTGATATGTTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTAATGAAGGCACTTCCTaGGTTCTCTGTGCAGCAAGT +
Preference number: 5 (lower is better)
Translates to: LGDGREMTEPFSISGDFFNEGTS*VLCAAS
Trigger: ACTTGCTGCACAGAGAACCAAGGAAGTGCCTTCATT...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTAGACTGGATGTGATGTaGCCACTGAGTAACCAGAGA +
Preference number: 5 (lower is better)
Translates to: LGDGREMTEPFSISGDFFRLDVM*PLSNQR
Trigger: TCTCTGGTTACTCAGTGGCAACATCACATCCAGTCT...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGAATTTTCTAGACCTTaGCTTGCAAAACATTCTGAG +
Preference number: 5 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHEFSRP*LAKHSE
Trigger: CTCAGAATGTTTTGCAAGCAAAGGTCTAGAAAATTC...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp CTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCAACACGGCAGTTGTAGCAATTaGGCATCATATTTCTCTTTA +
Preference number: 5 (lower is better)
Translates to: LVSCNFPKFIQAGSCEQHGSCSN*ASYFSL
Trigger: TAAAGAGAAATATGATGCCAAATTGCTACAACTGCC...GTGTTGCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTGTTATTGGATTCCATTaGTCCCCAGGAAATTCCTGC +
Preference number: 5 (lower is better)
Translates to: LGDGREMTEPFSISGDFFVIGFH*SPGNSC
Trigger: GCAGGAATTTCCTGGGGACAAATGGAATCCAATAAC...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp ATCAGGCTAGACTCCAGAACTAGACTCTGTATACTGCTTAGGTCTATACCTGAGCTGAGATTACACCTATaGTTGACTTTTTCTGCATTC +
Preference number: 5 (lower is better)
Translates to: IRLDSRTRLCILLRSIPELRLHL*LTFSAF
Trigger: GAATGCAGAAAAAGTCAACAATAGGTGTAATCTCAG...CTCAGGTATAGACCTAAGCAGTATACAGAGTCTAGTTCTGGAGTCTAGCCTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCGATGTAGATAAGGATTaGCTACTCTCTTCAAAGAAC +
Preference number: 5 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSDVDKD*LLSSKN
Trigger: GTTCTTTGAAGAGAGTAGCAAATCCTTATCTACATC...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTGAATTTTCTAGACCTTaGCTTGCAAAACATTCTGAG +
Preference number: 5 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSEFSRP*LAKHSE
Trigger: CTCAGAATGTTTTGCAAGCAAAGGTCTAGAAAATTC...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCTCTTGTGTTTTAACCTaGTATCCTGCAACTTTCCTA +
Preference number: 5 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSSCVLT*YPATFL
Trigger: TAGGAAAGTTGCAGGATACAAGGTTAAAACACAAGA...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS-3UTR CAA 90 bp TTAACCTTGTATCCTGCAACTTTCCTAAATTCATCCAGGCAGGTAGTTGTGAGCTTTTCAATGTCAGAGTaGCTTCCTGGAATACATTTG +
Preference number: 5 (lower is better)
Translates to: LTLYPATFLNSSRQVVVSFSMSE*LPGIHL
Trigger: CAAATGTATTCCAGGAAGCAACTCTGACATTGAAAA...GCTCACAACTACCTGCCTGGATGAATTTAGGAAAGTTGCAGGATACAAGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS-3UTR CAA 90 bp CTTTTTCTGCATTCTAAACATGGGGTTAGACTGGATGTGATGTTGCCACTGAGTTTTTCAATGTCAGAGTaGCTTCCTGGAATACATTTG +
Preference number: 5 (lower is better)
Translates to: LFLHSKHGVRLDVMLPLSFSMSE*LPGIHL
Trigger: CAAATGTATTCCAGGAAGCAACTCTGACATTGAAAA...ACTCAGTGGCAACATCACATCCAGTCTAACCCCATGTTTAGAATGCAGAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp GCTTTATGGCACATGAGGTTAAATGGAAAACAGAACCTGAACCTAACCTTGAAGGATGTAGATAAGGATTaGCTACTCTCTTCAAAGAAC +
Preference number: 5 (lower is better)
Translates to: ALWHMRLNGKQNLNLTLKDVDKD*LLSSKN
Trigger: GTTCTTTGAAGAGAGTAGCAAATCCTTATCTACATC...CTTCAAGGTTAGGTTCAGGTTCTGTTTTCCATTTAACCTCATGTGCCATAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp CTTGGAGATGGTAGAGAAATGACTGAACCTTTCTCCATTTCAGGAGATTTCTTTTTTTTCAAAGCATGTTaGAAGTCTCCAAGGAGGTCA +
Preference number: 5 (lower is better)
Translates to: LGDGREMTEPFSISGDFFFFKAC*KSPRRS
Trigger: TGACCTCCTTGGAGACTTCAAACATGCTTTGAAAAA...AAAGAAATCTCCTGAAATGGAGAAAGGTTCAGTCATTTCTCTACCATCTCCAAG
39% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp ATGAAACATATCAGCCTCATCCTCCCAATACAGGACATCTCAATTTGCTCATTGCTTCCTGGAATACATTaGAGTCTAATCTTTGAGGTT +
Preference number: 5 (lower is better)
Translates to: MKHISLILPIQDISICSLLPGIH*SLIFEV
Trigger: AACCTCAAAGATTAGACTCAAATGTATTCCAGGAAG...CAATGAGCAAATTGAGATGTCCTGTATTGGGAGGATGAGGCTGATATGTTTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376020.8
ENST00000460112.3
CDS-3UTR CAA 90 bp TCAACAAGTCAGTACTTCCCATGCTGTAATATGTTCATGAATCTCCTGGAAATCTTTCTAGACCTTTGCTaGCAAAACATTCTGAGTAAG +
Preference number: 5 (lower is better)
Translates to: STSQYFPCCNMFMNLLEIFLDLC*QNILSK
Trigger: CTTACTCAGAATGTTTTGCAAGCAAAGGTCTAGAAA...GATTTCCAGGAGATTCATGAACATATTACAGCATGGGAAGTACTGACTTGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376020.8
CDS CCA 72 bp CACCCCGCACCGCCCTGCTCCGCCTACTCTCCCGGCTaGAGACGCTCAGGCAGCGAGCGAGCGCAAGGAGGA +
Preference number: 6 (lower is better)
Translates to: HPAPPCSAYSPG*RRSGSERAQGG
Trigger: TCCTCCTTGCGCTCGCTCGCTGCCTGAGCGTCTCCAGCCGGGAGAGTAGGCGGAGCAGGGCGGTGCGGGGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS TCA 72 bp GGTCAGGTGGCCCCCATTGGTGCGCCGACTACCTCCTaGGGTCTCAGCCACATTAGGCCGGCCACTGGGGGC +
Preference number: 6 (lower is better)
Translates to: GQVAPIGAPTTS*GLSHIRPATGG
Trigger: GCCCCCAGTGGCCGGCCTAATGTGGCTGAGACCTCAGGAGGTAGTCGGCGCACCAATGGGGGCCACCTGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS TCA 72 bp CCCCAGGCCCGGGTGCTTTGGGGCGCCAAGCTGATGTaGCTCTCTGAGAAGGCACGGCTGCGCAGTGGGTGG +
Preference number: 6 (lower is better)
Translates to: PQARVLWGAKLM*LSEKARLRSGW
Trigger: CCACCCACTGCGCAGCCGTGCCTTCTCAGAGAGTCACATCAGCTTGGCGCCCCAAAGCACCCGGGCCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS TCA 72 bp GCTGCCCCCAGGCCCGGGTGCTTTGGGGCGCCAAGCTaGTGTGACTCTCTGAGAAGGCACGGCTGCGCAGTG +
Preference number: 6 (lower is better)
Translates to: AAPRPGCFGAPS*CDSLRRHGCAV
Trigger: CACTGCGCAGCCGTGCCTTCTCAGAGAGTCACATCAGCTTGGCGCCCCAAAGCACCCGGGCCTGGGGGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS GCA 72 bp CCCGGGTCCCTCCACTTCGCCTACCACCCATCCGGCTaGACTCCTTGGGCTCGCTGTCCCCTTCTTCACCTG +
Preference number: 6 (lower is better)
Translates to: PGSLHFAYHPSG*TPWARCPLLHL
Trigger: CAGGTGAAGAAGGGGACAGCGAGCCCAAGGAGTGCAGCCGGATGGGTGGTAGGCGAAGTGGAGGGACCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CAA 90 bp CCCCGGGTCCCTCCACTTCGCCTACCACCCATCCGGCTGCACTCCTaGGGCTCGCTGTCCCCTTCTTCACCTGCCTCTGTGCCACTAGCT +
Preference number: 6 (lower is better)
Translates to: PRVPPLRLPPIRLHS*GSLSPSSPASVPLA
Trigger: AGCTAGTGGCACAGAGGCAGGTGAAGAAGGGGACAGCGAGCCCAAGGAGTGCAGCCGGATGGGTGGTAGGCGAAGTGGAGGGACCCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS TCA 72 bp CCGGGTGCTTTGGGGCGCCAAGCTGATGTGACTCTCTaGGAAGGCACGGCTGCGCAGTGGGTGGGGCATGGA +
Preference number: 6 (lower is better)
Translates to: PGALGRQADVTL*EGTAAQWVGHG
Trigger: TCCATGCCCCACCCACTGCGCAGCCGTGCCTTCTCAGAGAGTCACATCAGCTTGGCGCCCCAAAGCACCCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CAA 72 bp AGGCCGGCCACTGGGGGCCTTAGTTGGCCCTGGGCCTaGCATGATGCAGTCTGTAGAGGCTGGCTCCTCTGG +
Preference number: 6 (lower is better)
Translates to: RPATGGLSWPWA*HDAVCRGWLLW
Trigger: CCAGAGGAGCCAGCCTCTACAGACTGCATCATGCAAGGCCCAGGGCCAACTAAGGCCCCCAGTGGCCGGCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CAA 90 bp GGGGACCACAGGCTCAGATGCCCTGCGCTGCTCTCCATTGAGGAGTaGGGCTCTGGAGGCCTGAAGGCTGTCCCGCCTCACTGGAGGTTG +
Preference number: 6 (lower is better)
Translates to: GDHRLRCPALLSIEE*GSGGLKAVPPHWRL
Trigger: CAACCTCCAGTGAGGCGGGACAGCCTTCAGGCCTCCAGAGCCCAACTCCTCAATGGAGAGCAGCGCAGGGCATCTGAGCCTGTGGTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS TCA 72 bp CCTGACTGGTATCCCTCCTGTGGACGGGATGACATCTaGGAGCTGGGGGTCAGGTGGCCCCCATTGGTGCGC +
Preference number: 6 (lower is better)
Translates to: PDWYPSCGRDDI*ELGVRWPPLVR
Trigger: GCGCACCAATGGGGGCCACCTGACCCCCAGCTCTCAGATGTCATCCCGTCCACAGGAGGGATACCAGTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS GCA 72 bp GGGCATCCCTCCAGCAGCTTGGCCACATGCCATGAGTaGGGCCTACTGACAGGGGCGTTCCTCCTCCTGACA +
Preference number: 6 (lower is better)
Translates to: GHPSSSLATCHE*GLLTGAFLLLT
Trigger: TGTCAGGAGGAGGAACGCCCCTGTCAGTAGGCCGCACTCATGGCATGTGGCCAAGCTGCTGGAGGGATGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS GCA 72 bp GCTGCTTCAGGGCATCCCTCCAGCAGCTTGGCCACATaGCATGAGTGCGGCCTACTGACAGGGGCGTTCCTC +
Preference number: 6 (lower is better)
Translates to: AASGHPSSSLAT*HECGLLTGAFL
Trigger: GAGGAACGCCCCTGTCAGTAGGCCGCACTCATGGCATGTGGCCAAGCTGCTGGAGGGATGCCCTGAAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 72 bp CTCCACTTCGCCTACCACCCATCCGGCTGCACTCCTTaGGCTCGCTGTCCCCTTCTTCACCTGCCTCTGTGC +
Preference number: 6 (lower is better)
Translates to: LHFAYHPSGCTP*ARCPLLHLPLC
Trigger: GCACAGAGGCAGGTGAAGAAGGGGACAGCGAGCCCAAGGAGTGCAGCCGGATGGGTGGTAGGCGAAGTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 72 bp CTGACAGGGGCGTTCCTCCATGGAAGTTGCCCAGGGTaGAGAGATGGCTTGGGAGAGAGCGGGGTATCCGGC +
Preference number: 6 (lower is better)
Translates to: LTGAFLHGSCPG*RDGLGESGVSG
Trigger: GCCGGATACCCCGCTCTCTCCCAAGCCATCTCTCCACCCTGGGCAACTTCCATGGAGGAACGCCCCTGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460112.3
CDS CAA 72 bp CCTCCACTTCGCCTACCACCCATCCGGCTGCACTCCTaGGGCTCGCTGTCCCCTTCTTCACCTGCCTCTGTG +
Preference number: 6 (lower is better)
Translates to: PPLRLPPIRLHS*GSLSPSSPASV
Trigger: CACAGAGGCAGGTGAAGAAGGGGACAGCGAGCCCAAGGAGTGCAGCCGGATGGGTGGTAGGCGAAGTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CAA 90 bp AGCCACATTAGGCCGGCCACTGGGGGCCTTAGTTGGCCCTGGGCCTaGCATGATGCAGTCTGTAGAGGCTGGCTCCTCTGGCCTGAGGGA +
Preference number: 6 (lower is better)
Translates to: SHIRPATGGLSWPWA*HDAVCRGWLLWPEG
Trigger: TCCCTCAGGCCAGAGGAGCCAGCCTCTACAGACTGCATCATGCAAGGCCCAGGGCCAACTAAGGCCCCCAGTGGCCGGCCTAATGTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS TCA 72 bp TTCAGGGCATCCCTCCAGCAGCTTGGCCACATGCCATaGGTGCGGCCTACTGACAGGGGCGTTCCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: FRASLQQLGHMP*VRPTDRGVPPP
Trigger: AGGAGGAGGAACGCCCCTGTCAGTAGGCCGCACTCATGGCATGTGGCCAAGCTGCTGGAGGGATGCCCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS TCA 72 bp CCAGCAGCTTGGCCACATGCCATGAGTGCGGCCTACTaGCAGGGGCGTTCCTCCATGGAAGTTGCCCAGGGT +
Preference number: 6 (lower is better)
Translates to: PAAWPHAMSAAY*QGRSSMEVAQG
Trigger: ACCCTGGGCAACTTCCATGGAGGAACGCCCCTGTCAGTAGGCCGCACTCATGGCATGTGGCCAAGCTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460112.3
CDS TCA 72 bp TTCAGGGCATCCCTCCAGCAGCTTGGCCACATGCCATaGGTGCGGCCTACTGACAGGGGCGTTCCTCCATGG +
Preference number: 6 (lower is better)
Translates to: FRASLQQLGHMP*VRPTDRGVPPW
Trigger: CCATGGAGGAACGCCCCTGTCAGTAGGCCGCACTCATGGCATGTGGCCAAGCTGCTGGAGGGATGCCCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460112.3
CDS GCA 72 bp GCCCATCCTGTACGGGTGGGAGCTCCATCCCTTTGCTaGCCCTGGTATCAAGGTGCACATGCTGCAGGTGGG +
Preference number: 6 (lower is better)
Translates to: AHPVRVGAPSLC*PWYQGAHAAGG
Trigger: CCCACCTGCAGCATGTGCACCTTGATACCAGGGGCAGCAAAGGGATGGAGCTCCCACCCGTACAGGATGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS GCA 72 bp GTCTCATCACCTTTGCTAAAGAGCTCCCTCCTATGCTaGCCCCAGGCCCGGGTGCTTTGGGGCGCCAAGCTG +
Preference number: 6 (lower is better)
Translates to: VSSPLLKSSLLC*PQARVLWGAKL
Trigger: CAGCTTGGCGCCCCAAAGCACCCGGGCCTGGGGGCAGCATAGGAGGGAGCTCTTTAGCAAAGGTGATGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS GCA 72 bp TGGGTCTCATCACCTTTGCTAAAGAGCTCCCTCCTATaGTGCCCCCAGGCCCGGGTGCTTTGGGGCGCCAAG +
Preference number: 6 (lower is better)
Translates to: WVSSPLLKSSLL*CPQARVLWGAK
Trigger: CTTGGCGCCCCAAAGCACCCGGGCCTGGGGGCAGCATAGGAGGGAGCTCTTTAGCAAAGGTGATGAGACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS GCA 72 bp CTTGGAGCTGGTCCTGAGGCAGGTAGCGGGAGACCATaGCAAACACCAACTTCTCCCGGCGGTCCACGTGCT +
Preference number: 6 (lower is better)
Translates to: LGAGPEAGSGRP*QTPTSPGGPRA
Trigger: AGCACGTGGACCGCCGGGAGAAGTTGGTGTTTGGCATGGTCTCCCGCTACCTGCCTCAGGACCAGCTCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS GCA 72 bp GGGCATCCCTCCAGCAGCTTGGCCACATGCCATGAGTaGGGCCTACTGACAGGGGCGTTCCTCCATGGAAGT +
Preference number: 6 (lower is better)
Translates to: GHPSSSLATCHE*GLLTGAFLHGS
Trigger: ACTTCCATGGAGGAACGCCCCTGTCAGTAGGCCGCACTCATGGCATGTGGCCAAGCTGCTGGAGGGATGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460112.3
CDS CAA 90 bp AGAGTCCACTGGTGCCCATCCTGTACGGGTGGGAGCTCCATCCCTTaGCTGCCCCTGGTATCAAGGTGCACATGCTGCAGGTGGGATGCC +
Preference number: 6 (lower is better)
Translates to: RVHWCPSCTGGSSIP*LPLVSRCTCCRWDA
Trigger: GGCATCCCACCTGCAGCATGTGCACCTTGATACCAGGGGCAGCAAAGGGATGGAGCTCCCACCCGTACAGGATGGGCACCAGTGGACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS TCA 72 bp GTGAACCCTGTCTCGAGCCCTCCAGGTGGCCAAAGCTaGGGGGTTGTGGCTGCTCTAGGACCTCCTCAGGAT +
Preference number: 6 (lower is better)
Translates to: VNPVSSPPGGQS*GVVAALGPPQD
Trigger: ATCCTGAGGAGGTCCTAGAGCAGCCACAACCCCTCAGCTTTGGCCACCTGGAGGGCTCGAGACAGGGTTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS TCA 72 bp GAGAGAGCGGGGTATCCGGCTAGCTCAGACTCTCGTTaGCAAACCCTCCAGCCAGCGTCCTCCCTTAGCTGG +
Preference number: 6 (lower is better)
Translates to: ERAGYPASSDSR*QTLQPASSLSW
Trigger: CCAGCTAAGGGAGGACGCTGGCTGGAGGGTTTGTCAACGAGAGTCTGAGCTAGCCGGATACCCCGCTCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460112.3
CDS CCA 72 bp ATGACATCTGAGAGCTGGGGGTCAGGTGGCCCCCATTaGTGCGCCGACTACCTCCTGAGGTCTCAGCCACAT +
Preference number: 6 (lower is better)
Translates to: MTSESWGSGGPH*CADYLLRSQPH
Trigger: ATGTGGCTGAGACCTCAGGAGGTAGTCGGCGCACCAATGGGGGCCACCTGACCCCCAGCTCTCAGATGTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 72 bp GGTGCTTTCCACCAGGTGTTCAGGCCCAAAGAGGACTaGCCAGGCCTCTGGCCAGGGCTTATTCGTCCCTCT +
Preference number: 6 (lower is better)
Translates to: GAFHQVFRPKED*PGLWPGLIRPS
Trigger: AGAGGGACGAATAAGCCCTGGCCAGAGGCCTGGCCAGTCCTCTTTGGGCCTGAACACCTGGTGGAAAGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 72 bp TCTCTGAGAAGGCACGGCTGCGCAGTGGGTGGGGCATaGAGGCAAGGGAGCTCCCCTCCTCATAAACTGAAG +
Preference number: 6 (lower is better)
Translates to: SLRRHGCAVGGA*RQGSSPPHKLK
Trigger: CTTCAGTTTATGAGGAGGGGAGCTCCCTTGCCTCCATGCCCCACCCACTGCGCAGCCGTGCCTTCTCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 72 bp GCTGGGCTGCACGAAAGAGCCTGTACTTCTCCCAGTTaGGAGGAGGAGGGCGAGGAGGAGGAAAGGCCTTCT +
Preference number: 6 (lower is better)
Translates to: AGLHERACTSPS*EEEGEEEERPS
Trigger: AGAAGGCCTTTCCTCCTCCTCGCCCTCCTCCTCCCAACTGGGAGAAGTACAGGCTCTTTCGTGCAGCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 72 bp GGGACACTTTGTGAACCCTGTCTCGAGCCCTCCAGGTaGCCAAAGCTGAGGGGTTGTGGCTGCTCTAGGACC +
Preference number: 6 (lower is better)
Translates to: GTLCEPCLEPSR*PKLRGCGCSRT
Trigger: GGTCCTAGAGCAGCCACAACCCCTCAGCTTTGGCCACCTGGAGGGCTCGAGACAGGGTTCACAAAGTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CAA 72 bp CAGATTGGTAGCAAAACGCTCACTCTTCCGCCGGTTTaGGATCGAGCGGCCCCGGGTCCCTCCACTTCGCCT +
Preference number: 6 (lower is better)
Translates to: QIGSKTLTLPPV*DRAAPGPSTSP
Trigger: AGGCGAAGTGGAGGGACCCGGGGCCGCTCGATCCAAAACCGGCGGAAGAGTGAGCGTTTTGCTACCAATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CAA 72 bp TGCTGGGCTGCACGAAAGAGCCTGTACTTCTCCCAGTaGGGAGGAGGAGGGCGAGGAGGAGGAAAGGCCTTC +
Preference number: 6 (lower is better)
Translates to: CWAARKSLYFSQ*GGGGRGGGKAF
Trigger: GAAGGCCTTTCCTCCTCCTCGCCCTCCTCCTCCCAACTGGGAGAAGTACAGGCTCTTTCGTGCAGCCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CAA 90 bp GCCTTCTTCCTGGCTCCGAGAAGATCCGACTGGGTCTCATCACCTTaGCTAAAGAGCTCCCTCCTATGCTGCCCCCAGGCCCGGGTGCTT +
Preference number: 6 (lower is better)
Translates to: AFFLAPRRSDWVSSP*LKSSLLCCPQARVL
Trigger: AAGCACCCGGGCCTGGGGGCAGCATAGGAGGGAGCTCTTTAGCAAAGGTGATGAGACCCAGTCGGATCTTCTCGGAGCCAGGAAGAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CAA 90 bp TGCTTCTGCTGCTGGGCTGCACGAAAGAGCCTGTACTTCTCCCAGTaGGGAGGAGGAGGGCGAGGAGGAGGAAAGGCCTTCTTCCTGGCT +
Preference number: 6 (lower is better)
Translates to: CFCCWAARKSLYFSQ*GGGGRGGGKAFFLA
Trigger: AGCCAGGAAGAAGGCCTTTCCTCCTCCTCGCCCTCCTCCTCCCAACTGGGAGAAGTACAGGCTCTTTCGTGCAGCCCAGCAGCAGAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS GCA 72 bp GGCTCTCCATGCTGCCAATGGAGCTGCTTTTCTCGGTaGTGCAATGCCGGGAGAGTGGACACCACTGCACAC +
Preference number: 6 (lower is better)
Translates to: GSPCCQWSCFSR*CNAGRVDTTAH
Trigger: GTGTGCAGTGGTGTCCACTCTCCCGGCATTGCAGCACCGAGAAAAGCAGCTCCATTGGCAGCATGGAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS GCA 72 bp TGGGATGCCAGCAGCTGTTCAGGGGCACTATGGCGATaGCCTGTGGGTCCTATGAGATGTGGAGGTCTGCCA +
Preference number: 6 (lower is better)
Translates to: WDASSCSGALWR*PVGPMRCGGLP
Trigger: TGGCAGACCTCCACATCTCATAGGACCCACAGGGCATCGCCATAGTGCCCCTGAACAGCTGCTGGCATCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS GCA 72 bp GAGCCCTCCAGGTGGCCAAAGCTGAGGGGTTGTGGCTaGTCTAGGACCTCCTCAGGATTGAGAGCACAGGAA +
Preference number: 6 (lower is better)
Translates to: EPSRWPKLRGCG*SRTSSGLRAQE
Trigger: TTCCTGTGCTCTCAATCCTGAGGAGGTCCTAGAGCAGCCACAACCCCTCAGCTTTGGCCACCTGGAGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 72 bp TGCAGGTGGGATGCCAGCAGCTGTTCAGGGGCACTATaGCGATGCCCTGTGGGTCCTATGAGATGTGGAGGT +
Preference number: 6 (lower is better)
Translates to: CRWDASSCSGAL*RCPVGPMRCGG
Trigger: ACCTCCACATCTCATAGGACCCACAGGGCATCGCCATAGTGCCCCTGAACAGCTGCTGGCATCCCACCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 72 bp CAGGTGTTCAGGCCCAAAGAGGACTGGCCAGGCCTCTaGCCAGGGCTTATTCGTCCCTCTAAGCCTGTCCTA +
Preference number: 6 (lower is better)
Translates to: QVFRPKEDWPGL*PGLIRPSKPVL
Trigger: TAGGACAGGCTTAGAGGGACGAATAAGCCCTGGCCAGAGGCCTGGCCAGTCCTCTTTGGGCCTGAACACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 72 bp TCCTCCATGGAAGTTGCCCAGGGTGGAGAGATGGCTTaGGAGAGAGCGGGGTATCCGGCTAGCTCAGACTCT +
Preference number: 6 (lower is better)
Translates to: SSMEVAQGGEMA*ERAGYPASSDS
Trigger: AGAGTCTGAGCTAGCCGGATACCCCGCTCTCTCCCAAGCCATCTCTCCACCCTGGGCAACTTCCATGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460112.3
CDS CAA 90 bp TTCATTACGCAGATTGGTAGCAAAACGCTCACTCTTCCGCCGGTTTaGGATCGAGCGGCCCCGGGTCCCTCCACTTCGCCTACCACCCAT +
Preference number: 6 (lower is better)
Translates to: FITQIGSKTLTLPPV*DRAAPGPSTSPTTH
Trigger: ATGGGTGGTAGGCGAAGTGGAGGGACCCGGGGCCGCTCGATCCAAAACCGGCGGAAGAGTGAGCGTTTTGCTACCAATCTGCGTAATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS GCA 72 bp TGGCTTCCTGTCCCGATGTCCTCCAAAGCCCACCAATaGCATAGTAGCAAGGGGGCTGAGCCTGCTCAGGTT +
Preference number: 6 (lower is better)
Translates to: WLPVPMSSKAHQ*HSSKGAEPAQV
Trigger: AACCTGAGCAGGCTCAGCCCCCTTGCTACTATGGCATTGGTGGGCTTTGGAGGACATCGGGACAGGAAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CAA 90 bp TTCTTCCTCCTCCTCCTCCTCCTCCTGTTGCTTCTGCTGCTGCTGTaGCTGCTTCTGCTGCTGGGCTGCACGAAAGAGCCTGTACTTCTC +
Preference number: 6 (lower is better)
Translates to: FFLLLLLLLLLLLLL*LLLLLGCTKEPVLL
Trigger: GAGAAGTACAGGCTCTTTCGTGCAGCCCAGCAGCAGAAGCAGCAACAGCAGCAGCAGAAGCAACAGGAGGAGGAGGAGGAGGAGGAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS GCA 72 bp TTCTCGGTGCTGCAATGCCGGGAGAGTGGACACCACTaGACACACACGTCACTTGTGTTGCAGCCAGAATGC +
Preference number: 6 (lower is better)
Translates to: FSVLQCRESGHH*THTSLVLQPEC
Trigger: GCATTCTGGCTGCAACACAAGTGACGTGTGTGTGCAGTGGTGTCCACTCTCCCGGCATTGCAGCACCGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS GCA 72 bp TCTCCATGCTGCCAATGGAGCTGCTTTTCTCGGTGCTaGAATGCCGGGAGAGTGGACACCACTGCACACACA +
Preference number: 6 (lower is better)
Translates to: SPCCQWSCFSRC*NAGRVDTTAHT
Trigger: TGTGTGTGCAGTGGTGTCCACTCTCCCGGCATTGCAGCACCGAGAAAAGCAGCTCCATTGGCAGCATGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS GCA 72 bp ATTCCTGCACTGTCAGCTTCCTGGGTTTCCAAGTGTTaGCAGGTGCCAAGCTGCTGTCCTCGAGGGCACTGT +
Preference number: 6 (lower is better)
Translates to: IPALSASWVSKC*QVPSCCPRGHC
Trigger: ACAGTGCCCTCGAGGACAGCAGCTTGGCACCTGGCAACACTTGGAAACCCAGGAAGCTGACAGTGCAGGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS GCA 72 bp TCCTGTTGCTTCTGCTGCTGCTGTTGCTGCTTCTGCTaGTGGGCTGCACGAAAGAGCCTGTACTTCTCCCAG +
Preference number: 6 (lower is better)
Translates to: SCCFCCCCCCFC*WAARKSLYFSQ
Trigger: CTGGGAGAAGTACAGGCTCTTTCGTGCAGCCCAGCAGCAGAAGCAGCAACAGCAGCAGCAGAAGCAACAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS GCA 72 bp TCCTCCTGTTGCTTCTGCTGCTGCTGTTGCTGCTTCTaGTGCTGGGCTGCACGAAAGAGCCTGTACTTCTCC +
Preference number: 6 (lower is better)
Translates to: SSCCFCCCCCCF*CWAARKSLYFS
Trigger: GGAGAAGTACAGGCTCTTTCGTGCAGCCCAGCAGCAGAAGCAGCAACAGCAGCAGCAGAAGCAACAGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS GCA 72 bp GAAATACTGGGGTGGCAGCTCCTCTTCCTCCTCCTCTaGCTCCTCCTCCTCCTCTTCCTCTTCCTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: EILGWQLLFLLL*LLLLLFLFLFF
Trigger: GAAGAAGAGGAAGAGGAAGAGGAGGAGGAGGAGGCAGAGGAGGAGGAAGAGGAGCTGCCACCCCAGTATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 72 bp GGAGCTGCTTTTCTCGGTGCTGCAATGCCGGGAGAGTaGACACCACTGCACACACACGTCACTTGTGTTGCA +
Preference number: 6 (lower is better)
Translates to: GAAFLGAAMPGE*TPLHTHVTCVA
Trigger: TGCAACACAAGTGACGTGTGTGTGCAGTGGTGTCCACTCTCCCGGCATTGCAGCACCGAGAAAAGCAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CAA 90 bp TCCACGCTGGAAGCTCTGTCACAGGCTTTTGGGGATCCAACAGCTTaGGTTGAGGCCTGCATCAGTAGATGCTCAGAGCCCTGTTGGCTG +
Preference number: 6 (lower is better)
Translates to: STLEALSQAFGDPTA*VEACISRCSEPCWL
Trigger: CAGCCAACAGGGCTCTGAGCATCTACTGATGCAGGCCTCAACCAAAGCTGTTGGATCCCCAAAAGCCTGTGACAGAGCTTCCAGCGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS TCA 72 bp ACGGACTCCACAGTGAGCATGTGCTTTCTCAGGGTCTaGGGAGGATGGGTCAGGTGCTTTCCACCAGGTGTT +
Preference number: 6 (lower is better)
Translates to: TDSTVSMCFLRV*GGWVRCFPPGV
Trigger: AACACCTGGTGGAAAGCACCTGACCCATCCTCCTCAGACCCTGAGAAAGCACATGCTCACTGTGGAGTCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS GCA 72 bp GCTTCCTGGGTTTCCAAGTGTTGCCAGGTGCCAAGCTaGTGTCCTCGAGGGCACTGTGCTGAGGATTATGAT +
Preference number: 6 (lower is better)
Translates to: ASWVSKCCQVPS*CPRGHCAEDYD
Trigger: ATCATAATCCTCAGCACAGTGCCCTCGAGGACAGCAGCTTGGCACCTGGCAACACTTGGAAACCCAGGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 72 bp GGGTGTCCATCAGCCTCTCCATGTGGGGGACTGCTTTaGCTCTGGTGTCCCAAAACTAAAGACCTGTCATCC +
Preference number: 6 (lower is better)
Translates to: GCPSASPCGGLL*LWCPKTKDLSS
Trigger: GGATGACAGGTCTTTAGTTTTGGGACACCAGAGCCAAAGCAGTCCCCCACATGGAGAGGCTGATGGACACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 72 bp AGCCAGAGGCAGAGGGTTGCTGGTTGGCCAATTCACTaGCTGCTCTGCTTGTTCTGTTTGGGTCCAGGAAAC +
Preference number: 6 (lower is better)
Translates to: SQRQRVAGWPIH*LLCLFCLGPGN
Trigger: GTTTCCTGGACCCAAACAGAACAAGCAGAGCAGCCAGTGAATTGGCCAACCAGCAACCCTCTGCCTCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 72 bp TCTAAGCCTGTCCTAGATTCATGGCTCTCAGGGGCTTaGCTGAGGCACTCGGAAGACCTAGCTCTGAGCATC +
Preference number: 6 (lower is better)
Translates to: SKPVLDSWLSGA*LRHSEDLALSI
Trigger: GATGCTCAGAGCTAGGTCTTCCGAGTGCCTCAGCCAAGCCCCTGAGAGCCATGAATCTAGGACAGGCTTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 72 bp TGTTGCTTCTGCTGCTGCTGTTGCTGCTTCTGCTGCTaGGCTGCACGAAAGAGCCTGTACTTCTCCCAGTTG +
Preference number: 6 (lower is better)
Translates to: CCFCCCCCCFCC*AARKSLYFSQL
Trigger: CAACTGGGAGAAGTACAGGCTCTTTCGTGCAGCCCAGCAGCAGAAGCAGCAACAGCAGCAGCAGAAGCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CAA 72 bp TTGCTGGGCCCCAGGAGTAGACTCTCCCTGAGACATTaGAGTTGCTCTTCCCCGAGCTTGATCTTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: LLGPRSRLSLRH*SCSSPSLIFSS
Trigger: GGAGGAGAAGATCAAGCTCGGGGAAGAGCAACTCAAATGTCTCAGGGAGAGTCTACTCCTGGGGCCCAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CAA 90 bp CGCTGGAAGCTCTGTCACAGGCTTTTGGGGATCCAACAGCTTTGGTaGAGGCCTGCATCAGTAGATGCTCAGAGCCCTGTTGGCTGGATT +
Preference number: 6 (lower is better)
Translates to: RWKLCHRLLGIQQLW*RPASVDAQSPVGWI
Trigger: AATCCAGCCAACAGGGCTCTGAGCATCTACTGATGCAGGCCTCAACCAAAGCTGTTGGATCCCCAAAAGCCTGTGACAGAGCTTCCAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CAA 90 bp AGAACAGTCCGTGGCTTGTTGAACAAGGGAGCCAGAGGCAGAGGGTaGCTGGTTGGCCAATTCACTGGCTGCTCTGCTTGTTCTGTTTGG +
Preference number: 6 (lower is better)
Translates to: RTVRGLLNKGARGRG*LVGQFTGCSACSVW
Trigger: CCAAACAGAACAAGCAGAGCAGCCAGTGAATTGGCCAACCAGCAACCCTCTGCCTCTGGCTCCCTTGTTCAACAAGCCACGGACTGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS TCA 72 bp GCTGCTTTAGTGGTTGAAGAACAGTCCGTGGCTTGTTaGACAAGGGAGCCAGAGGCAGAGGGTTGCTGGTTG +
Preference number: 6 (lower is better)
Translates to: AALVVEEQSVAC*TREPEAEGCWL
Trigger: CAACCAGCAACCCTCTGCCTCTGGCTCCCTTGTTCAACAAGCCACGGACTGTTCTTCAACCACTAAAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS TCA 72 bp CTCGAGGGCACTGTGCTGAGGATTATGATAGCAAACTaGACACCGAATGCATTGGTGGTGGTGGCACCGGCA +
Preference number: 6 (lower is better)
Translates to: LEGTVLRIMIAN*TPNALVVVAPA
Trigger: TGCCGGTGCCACCACCACCAATGCATTCGGTGTTCAGTTTGCTATCATAATCCTCAGCACAGTGCCCTCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS GCA 72 bp CAGGCTTTTGGGGATCCAACAGCTTTGGTTGAGGCCTaGATCAGTAGATGCTCAGAGCCCTGTTGGCTGGAT +
Preference number: 6 (lower is better)
Translates to: QAFGDPTALVEA*ISRCSEPCWLD
Trigger: ATCCAGCCAACAGGGCTCTGAGCATCTACTGATGCAGGCCTCAACCAAAGCTGTTGGATCCCCAAAAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS GCA 72 bp TTCAGCTCCTTGGCATCTGCCAACTGCCCCGTCAGCTaGTGCTTCTTCTCTATCAGTACCAACTTCTCCTGG +
Preference number: 6 (lower is better)
Translates to: FSSLASANCPVS*CFFSISTNFSW
Trigger: CCAGGAGAAGTTGGTACTGATAGAGAAGAAGCAGCAGCTGACGGGGCAGTTGGCAGATGCCAAGGAGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 72 bp GGAAAGGCCTTCTTCCTGGCTCCGAGAAGATCCGACTaGGTCTCATCACCTTTGCTAAAGAGCTCCCTCCTA +
Preference number: 6 (lower is better)
Translates to: GKAFFLAPRRSD*VSSPLLKSSLL
Trigger: TAGGAGGGAGCTCTTTAGCAAAGGTGATGAGACCCAGTCGGATCTTCTCGGAGCCAGGAAGAAGGCCTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CAA 72 bp GGTTGGAATCCACGCTGGAAGCTCTGTCACAGGCTTTaGGGGATCCAACAGCTTTGGTTGAGGCCTGCATCA +
Preference number: 6 (lower is better)
Translates to: GWNPRWKLCHRL*GIQQLWLRPAS
Trigger: TGATGCAGGCCTCAACCAAAGCTGTTGGATCCCCAAAAGCCTGTGACAGAGCTTCCAGCGTGGATTCCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CAA 90 bp AGGGTTGCTGGTTGGCCAATTCACTGGCTGCTCTGCTTGTTCTGTTaGGGTCCAGGAAACCTTTTTCTGAGGGGTGTCCATCAGCCTCTC +
Preference number: 6 (lower is better)
Translates to: RVAGWPIHWLLCLFC*GPGNLFLRGVHQPL
Trigger: GAGAGGCTGATGGACACCCCTCAGAAAAAGGTTTCCTGGACCCAAACAGAACAAGCAGAGCAGCCAGTGAATTGGCCAACCAGCAACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CAA 90 bp CAGAGGCAGAGGGTTGCTGGTTGGCCAATTCACTGGCTGCTCTGCTaGTTCTGTTTGGGTCCAGGAAACCTTTTTCTGAGGGGTGTCCAT +
Preference number: 6 (lower is better)
Translates to: QRQRVAGWPIHWLLC*FCLGPGNLFLRGVH
Trigger: ATGGACACCCCTCAGAAAAAGGTTTCCTGGACCCAAACAGAACAAGCAGAGCAGCCAGTGAATTGGCCAACCAGCAACCCTCTGCCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CAA 90 bp TGGCCAAAGCTGAGGGGTTGTGGCTGCTCTAGGACCTCCTCAGGATaGAGAGCACAGGAACCAGAGGTTTCTGAACTGAAATACTGGGGT +
Preference number: 6 (lower is better)
Translates to: WPKLRGCGCSRTSSG*RAQEPEVSELKYWG
Trigger: ACCCCAGTATTTCAGTTCAGAAACCTCTGGTTCCTGTGCTCTCAATCCTGAGGAGGTCCTAGAGCAGCCACAACCCCTCAGCTTTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CAA 90 bp AAGCCCACCAATGCCATAGTAGCAAGGGGGCTGAGCCTGCTCAGGTaGAGATCCCAAGTGACCCCTTATTGGAGGCAAGAAATCACTGGA +
Preference number: 6 (lower is better)
Translates to: KPTNAIVARGLSLLR*RSQVTPYWRQEITG
Trigger: TCCAGTGATTTCTTGCCTCCAATAAGGGGTCACTTGGGATCTCAACCTGAGCAGGCTCAGCCCCCTTGCTACTATGGCATTGGTGGGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS TCA 72 bp TTCACCTGCCTCTGTGCCACTAGCTGCTTTAGTGGTTaGAGAACAGTCCGTGGCTTGTTGAACAAGGGAGCC +
Preference number: 6 (lower is better)
Translates to: FTCLCATSCFSG*RTVRGLLNKGA
Trigger: GGCTCCCTTGTTCAACAAGCCACGGACTGTTCTTCAACCACTAAAGCAGCTAGTGGCACAGAGGCAGGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS TCA 72 bp CTCCTCAGGATTGAGAGCACAGGAACCAGAGGTTTCTaGACTGAAATACTGGGGTGGCAGCTCCTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: LLRIESTGTRGF*TEILGWQLLFL
Trigger: GAGGAAGAGGAGCTGCCACCCCAGTATTTCAGTTCAGAAACCTCTGGTTCCTGTGCTCTCAATCCTGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS TCA 72 bp CTTCTCTATCAGTACCAACTTCTCCTGGTTGGCCTCTaGATCGATGCTGTTCAGAGCATTCTCCACCCGGGC +
Preference number: 6 (lower is better)
Translates to: LLYQYQLLLVGL*IDAVQSILHPG
Trigger: GCCCGGGTGGAGAATGCTCTGAACAGCATCGATTCAGAGGCCAACCAGGAGAAGTTGGTACTGATAGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS GCA 72 bp CACTGCACACACACGTCACTTGTGTTGCAGCCAGAATaGCAGGACAAGCTGAAGGCTTCAGAAGGGAAATGC +
Preference number: 6 (lower is better)
Translates to: HCTHTSLVLQPE*QDKLKASEGKC
Trigger: GCATTTCCCTTCTGAAGCCTTCAGCTTGTCCTGGCATTCTGGCTGCAACACAAGTGACGTGTGTGTGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS GCA 72 bp AGAGGCAGAGGGTTGCTGGTTGGCCAATTCACTGGCTaGTCTGCTTGTTCTGTTTGGGTCCAGGAAACCTTT +
Preference number: 6 (lower is better)
Translates to: RGRGLLVGQFTG*SACSVWVQETF
Trigger: AAAGGTTTCCTGGACCCAAACAGAACAAGCAGAGCAGCCAGTGAATTGGCCAACCAGCAACCCTCTGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 72 bp AAGCTCTGTCACAGGCTTTTGGGGATCCAACAGCTTTaGTTGAGGCCTGCATCAGTAGATGCTCAGAGCCCT +
Preference number: 6 (lower is better)
Translates to: KLCHRLLGIQQL*LRPASVDAQSP
Trigger: AGGGCTCTGAGCATCTACTGATGCAGGCCTCAACCAAAGCTGTTGGATCCCCAAAAGCCTGTGACAGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 72 bp CCATCAGCCTCTCCATGTGGGGGACTGCTTTGGCTCTaGTGTCCCAAAACTAAAGACCTGTCATCCACTTGT +
Preference number: 6 (lower is better)
Translates to: PSASPCGGLLWL*CPKTKDLSSTC
Trigger: ACAAGTGGATGACAGGTCTTTAGTTTTGGGACACCAGAGCCAAAGCAGTCCCCCACATGGAGAGGCTGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 72 bp TTGAGCAGTAGAAGCCTTCAATTCCTTGTTGTCACCTaGGTTGGAAGGGCCTTCCATGGCTGCTGCCACAAG +
Preference number: 6 (lower is better)
Translates to: LSSRSLQFLVVT*VGRAFHGCCHK
Trigger: CTTGTGGCAGCAGCCATGGAAGGCCCTTCCAACCCAGGTGACAACAAGGAATTGAAGGCTTCTACTGCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CAA 72 bp CTACTGACAGGGGCGTTCCTCCTCCTGACAATCAGCTaGAGAATCCGGAAGGAGCCTTTGATGAGAATGAGG +
Preference number: 6 (lower is better)
Translates to: LLTGAFLLLTIS*RIRKEPLMRMR
Trigger: CCTCATTCTCATCAAAGGCTCCTTCCGGATTCTCAAGCTGATTGTCAGGAGGAGGAACGCCCCTGTCAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS CAA 72 bp CTCTGTCACAGGCTTTTGGGGATCCAACAGCTTTGGTaGAGGCCTGCATCAGTAGATGCTCAGAGCCCTGTT +
Preference number: 6 (lower is better)
Translates to: LCHRLLGIQQLW*RPASVDAQSPV
Trigger: AACAGGGCTCTGAGCATCTACTGATGCAGGCCTCAACCAAAGCTGTTGGATCCCCAAAAGCCTGTGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CAA 72 bp CTGAGGGGTTGTGGCTGCTCTAGGACCTCCTCAGGATaGAGAGCACAGGAACCAGAGGTTTCTGAACTGAAA +
Preference number: 6 (lower is better)
Translates to: LRGCGCSRTSSG*RAQEPEVSELK
Trigger: TTTCAGTTCAGAAACCTCTGGTTCCTGTGCTCTCAATCCTGAGGAGGTCCTAGAGCAGCCACAACCCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CAA 72 bp AATGCCATAGTAGCAAGGGGGCTGAGCCTGCTCAGGTaGAGATCCCAAGTGACCCCTTATTGGAGGCAAGAA +
Preference number: 6 (lower is better)
Translates to: NAIVARGLSLLR*RSQVTPYWRQE
Trigger: TTCTTGCCTCCAATAAGGGGTCACTTGGGATCTCAACCTGAGCAGGCTCAGCCCCCTTGCTACTATGGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CAA 90 bp AGGAGGCTGACTGAACTCACAGTTCTGATGGCCCTCACTTGTCACTaGGTCATGCCCACTGAGGCAACAGAACCTATTAGGGTTCCTTGC +
Preference number: 6 (lower is better)
Translates to: RRLTELTVLMALTCH*VMPTEATEPIRVPC
Trigger: GCAAGGAACCCTAATAGGTTCTGTTGCCTCAGTGGGCATGACCAAGTGACAAGTGAGGGCCATCAGAACTGTGAGTTCAGTCAGCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CAA 90 bp AAGGGGGCTGAGCCTGCTCAGGTTGAGATCCCAAGTGACCCCTTATaGGAGGCAAGAAATCACTGGAATGGAGTGCAAAGGATTCTTGCT +
Preference number: 6 (lower is better)
Translates to: KGAEPAQVEIPSDPL*EARNHWNGVQRILA
Trigger: AGCAAGAATCCTTTGCACTCCATTCCAGTGATTTCTTGCCTCCAATAAGGGGTCACTTGGGATCTCAACCTGAGCAGGCTCAGCCCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS TCA 72 bp GGGCCTCTTGGCGGGAGCCATATAATGGAGTGCCATTaGTATTCACCAGCTCATCACCAGTCCTCATCTTCT +
Preference number: 6 (lower is better)
Translates to: GPLGGSHIMECH*YSPAHHQSSSS
Trigger: AGAAGATGAGGACTGGTGATGAGCTGGTGAATATCAATGGCACTCCATTATATGGCTCCCGCCAAGAGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000484922.1
CDS GCA 72 bp CAGAGGGTTGCTGGTTGGCCAATTCACTGGCTGCTCTaGTTGTTCTGTTTGGGTCCAGGAAACCTTTTTCTG +
Preference number: 6 (lower is better)
Translates to: QRVAGWPIHWLL*LFCLGPGNLFL
Trigger: CAGAAAAAGGTTTCCTGGACCCAAACAGAACAAGCAGAGCAGCCAGTGAATTGGCCAACCAGCAACCCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 72 bp GGGATGGCGCCTCAATTCCCTACAGCTGGAGCTCATTaGCTGGAAGTTTTGGTCTATAGGTTTTGGTCTCTG +
Preference number: 6 (lower is better)
Translates to: GMAPQFPTAGAH*LEVLVYRFWSL
Trigger: CAGAGACCAAAACCTATAGACCAAAACTTCCAGCCAATGAGCTCCAGCTGTAGGGAATTGAGGCGCCATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 72 bp GATATGGTTGGTCTGCGGAATGATATGATTGGTCCATaGGATGGCGCCTCAATTCCCTACAGCTGGAGCTCA +
Preference number: 6 (lower is better)
Translates to: DMVGLRNDMIGP*DGASIPYSWSS
Trigger: TGAGCTCCAGCTGTAGGGAATTGAGGCGCCATCCCATGGACCAATCATATCATTCCGCAGACCAACCATATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CAA 72 bp AGGGCCTCTTGGCGGGAGCCATATAATGGAGTGCCATaGATATTCACCAGCTCATCACCAGTCCTCATCTTC +
Preference number: 6 (lower is better)
Translates to: RASWREPYNGVP*IFTSSSPVLIF
Trigger: GAAGATGAGGACTGGTGATGAGCTGGTGAATATCAATGGCACTCCATTATATGGCTCCCGCCAAGAGGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000484922.1
CDS CAA 72 bp CCAAAAGAAGCCTTAGCTAGCTCTGCAGAAGCCTCATaGAGTGGGTTGGAATCCACGCTGGAAGCTCTGTCA +
Preference number: 6 (lower is better)
Translates to: PKEALASSAEAS*SGLESTLEALS
Trigger: TGACAGAGCTTCCAGCGTGGATTCCAACCCACTCAATGAGGCTTCTGCAGAGCTAGCTAAGGCTTCTTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CAA 72 bp GTCTGCAAAAGGCAAGAGGATGGCATCCTCCCCAGCTaGAGCAGTAGAAGCCTTCAATTCCTTGTTGTCACC +
Preference number: 6 (lower is better)
Translates to: VCKRQEDGILPS*SSRSLQFLVVT
Trigger: GGTGACAACAAGGAATTGAAGGCTTCTACTGCTCAAGCTGGGGAGGATGCCATCCTCTTGCCTTTTGCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CAA 72 bp GAGCCTGCTCAGGTTGAGATCCCAAGTGACCCCTTATaGGAGGCAAGAAATCACTGGAATGGAGTGCAAAGG +
Preference number: 6 (lower is better)
Translates to: EPAQVEIPSDPL*EARNHWNGVQR
Trigger: CCTTTGCACTCCATTCCAGTGATTTCTTGCCTCCAATAAGGGGTCACTTGGGATCTCAACCTGAGCAGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CAA 72 bp CTCTCCCTGAGACATTTGAGTTGCTCTTCCCCGAGCTaGATCTTCTCCTCCAGCTCTCGCTGTTCAATGATG +
Preference number: 6 (lower is better)
Translates to: LSLRHLSCSSPS*IFSSSSRCSMM
Trigger: CATCATTGAACAGCGAGAGCTGGAGGAGAAGATCAAGCTCGGGGAAGAGCAACTCAAATGTCTCAGGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CAA 72 bp CCAGGGGCCAGCAAACTTAGTCTCCTGACAATCAGCTaGAGAATCCGGAAGGAGCCTTTGATGAGAATGAGG +
Preference number: 6 (lower is better)
Translates to: PGASKLSLLTIS*RIRKEPLMRMR
Trigger: CCTCATTCTCATCAAAGGCTCCTTCCGGATTCTCAAGCTGATTGTCAGGAGACTAAGTTTGCTGGCCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484922.1
CDS CAA 90 bp AACACCGAATGCATTGGTGGTGGTGGCACCGGCAGTTGTAGCAATTaGGCATCATATTTCTCTTTAGCAAGGCAGGGCAGATTTCCCCAG +
Preference number: 6 (lower is better)
Translates to: NTECIGGGGTGSCSN*ASYFSLARQGRFPQ
Trigger: CTGGGGAAATCTGCCCTGCCTTGCTAAAGAGAAATATGATGCCAAATTGCTACAACTGCCGGTGCCACCACCACCAATGCATTCGGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CAA 90 bp AGGAGTAGACTCTCCCTGAGACATTTGAGTTGCTCTTCCCCGAGCTaGATCTTCTCCTCCAGCTCTCGCTGTTCAATGATGAGAGCAGAT +
Preference number: 6 (lower is better)
Translates to: RSRLSLRHLSCSSPS*IFSSSSRCSMMRAD
Trigger: ATCTGCTCTCATCATTGAACAGCGAGAGCTGGAGGAGAAGATCAAGCTCGGGGAAGAGCAACTCAAATGTCTCAGGGAGAGTCTACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS TCA 72 bp TCTGCAAAAGGCAAGAGGATGGCATCCTCCCCAGCTTaGGCAGTAGAAGCCTTCAATTCCTTGTTGTCACCT +
Preference number: 6 (lower is better)
Translates to: SAKGKRMASSPA*AVEAFNSLLSP
Trigger: AGGTGACAACAAGGAATTGAAGGCTTCTACTGCTCAAGCTGGGGAGGATGCCATCCTCTTGCCTTTTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS TCA 72 bp GTCTGTGGCATGATATGGTTGGTCTGCGGAATGATATaGTTGGTCCATGGGATGGCGCCTCAATTCCCTACA +
Preference number: 6 (lower is better)
Translates to: VCGMIWLVCGMI*LVHGMAPQFPT
Trigger: TGTAGGGAATTGAGGCGCCATCCCATGGACCAATCATATCATTCCGCAGACCAACCATATCATGCCACAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS TCA 72 bp CTAAGAACAGGAAGGAGTAGCACTGAAGGCAAGGTATaGCCATCAGCCTGGATGGACCTAGATATGGCCACA +
Preference number: 6 (lower is better)
Translates to: LRTGRSSTEGKV*PSAWMDLDMAT
Trigger: TGTGGCCATATCTAGGTCCATCCAGGCTGATGGTCATACCTTGCCTTCAGTGCTACTCCTTCCTGTTCTTAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460112.3
CDS GCA 72 bp CAGCTCATCACCAGTCCTCATCTTCTGGGACAAAGCTaGCTTGCCTCCATCTTCAATCTTAGACACTGTGAG +
Preference number: 6 (lower is better)
Translates to: QLITSPHLLGQS*LASIFNLRHCE
Trigger: CTCACAGTGTCTAAGATTGAAGATGGAGGCAAGGCAGCTTTGTCCCAGAAGATGAGGACTGGTGATGAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289292.11
ENST00000376020.8
CDS GCA 72 bp GGCAAGAAATCACTGGAATGGAGTGCAAAGGATTCTTaGTCTGCTGGGACACTTTGTGAACCCTGTCTCGAG +
Preference number: 6 (lower is better)
Translates to: GKKSLEWSAKDS*SAGTLCEPCLE
Trigger: CTCGAGACAGGGTTCACAAAGTGTCCCAGCAGAGCAAGAATCCTTTGCACTCCATTCCAGTGATTTCTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 72 bp ATCCGGAAGGAGCCTTTGATGAGAATGAGGGCCTCTTaGCGGGAGCCATATAATGGAGTGCCATTGATATTC +
Preference number: 6 (lower is better)
Translates to: IRKEPLMRMRAS*REPYNGVPLIF
Trigger: GAATATCAATGGCACTCCATTATATGGCTCCCGCCAAGAGGCCCTCATTCTCATCAAAGGCTCCTTCCGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000484922.1
CDS CCA 72 bp TGGCGCCTCAATTCCCTACAGCTGGAGCTCATTGGCTaGAAGTTTTGGTCTATAGGTTTTGGTCTCTGGGTA +
Preference number: 6 (lower is better)
Translates to: WRLNSLQLELIG*KFWSIGFGLWV
Trigger: TACCCAGAGACCAAAACCTATAGACCAAAACTTCCAGCCAATGAGCTCCAGCTGTAGGGAATTGAGGCGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 72 bp CTTGACAAGTCCAGTGCTGGGTTCTCAAGGCAAGGATaGAAAGGGGTTGCCCATGAAAAGCTAGTCTTGGAA +
Preference number: 6 (lower is better)
Translates to: LDKSSAGFSRQG*KGVAHEKLVLE
Trigger: TTCCAAGACTAGCTTTTCATGGGCAACCCCTTTCCATCCTTGCCTTGAGAACCCAGCACTGGACTTGTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 72 bp AGCCTGCTCAGGTTGAGATCCCAAGTGACCCCTTATTaGAGGCAAGAAATCACTGGAATGGAGTGCAAAGGA +
Preference number: 6 (lower is better)
Translates to: SLLRLRSQVTPY*RQEITGMECKG
Trigger: TCCTTTGCACTCCATTCCAGTGATTTCTTGCCTCCAATAAGGGGTCACTTGGGATCTCAACCTGAGCAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CAA 90 bp ATGAGAATGAGGGCCTCTTGGCGGGAGCCATATAATGGAGTGCCATaGATATTCACCAGCTCATCACCAGTCCTCATCTTCTGGGACAAA +
Preference number: 6 (lower is better)
Translates to: MRMRASWREPYNGVP*IFTSSSPVLIFWDK
Trigger: TTTGTCCCAGAAGATGAGGACTGGTGATGAGCTGGTGAATATCAATGGCACTCCATTATATGGCTCCCGCCAAGAGGCCCTCATTCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000484922.1
CDS GCA 72 bp TGTGCTGAGGATTATGATAGCAAACTGAACACCGAATaGATTGGTGGTGGTGGCACCGGCAGTTGTAGCAAT +
Preference number: 6 (lower is better)
Translates to: CAEDYDSKLNTE*IGGGGTGSCSN
Trigger: ATTGCTACAACTGCCGGTGCCACCACCACCAATGCATTCGGTGTTCAGTTTGCTATCATAATCCTCAGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 72 bp ATCCCAAGTGACCCCTTATTGGAGGCAAGAAATCACTaGAATGGAGTGCAAAGGATTCTTGCTCTGCTGGGA +
Preference number: 6 (lower is better)
Translates to: IPSDPLLEARNH*NGVQRILALLG
Trigger: TCCCAGCAGAGCAAGAATCCTTTGCACTCCATTCCAGTGATTTCTTGCCTCCAATAAGGGGTCACTTGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS GCA 72 bp AAATGCAAGGATCATGGACTAGAGCTCCTTGAACACTaGAGGAGTAAGAGCAGGTCCTGTGGTAATCAAAAT +
Preference number: 6 (lower is better)
Translates to: KCKDHGLELLEH*RSKSRSCGNQN
Trigger: ATTTTGATTACCACAGGACCTGCTCTTACTCCTGCAGTGTTCAAGGAGCTCTAGTCCATGATCCTTGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CAA 72 bp CAATTCCCTACAGCTGGAGCTCATTGGCTGGAAGTTTaGGTCTATAGGTTTTGGTCTCTGGGTAAAAGTCTT +
Preference number: 6 (lower is better)
Translates to: QFPTAGAHWLEV*VYRFWSLGKSL
Trigger: AAGACTTTTACCCAGAGACCAAAACCTATAGACCAAAACTTCCAGCCAATGAGCTCCAGCTGTAGGGAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3
CDS CCA 72 bp ACTGAAGGGGTGACATGGAATGATATGATTGGTCTGTaGCATGATATGGTTGGTCTGCGGAATGATATGATT +
Preference number: 6 (lower is better)
Translates to: TEGVTWNDMIGL*HDMVGLRNDMI
Trigger: AATCATATCATTCCGCAGACCAACCATATCATGCCACAGACCAATCATATCATTCCATGTCACCCCTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289292.11
ENST00000376020.8
ENST00000460112.3